Pregenerated sensors for EGR1 (Homo sapiens)
Ensembl gene IDs: ENSG00000120738Ensembl transcript IDs: ENST00000239938.5
Found 146 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TCCACTCCAGTAGAGAGGGAGGACTTGGCTCTGAGAACCTCCATCTaGCCTAAGAGGAACCCTCCTCTCCTATGGCCATCTCCTCCTCCT | + |
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Preference number: 1 (lower is better) Translates to: STPVEREDLALRTSI*PKRNPPLLWPSPPP Trigger: AGGAGGAGGAGATGGCCATAGGAGAGGAGGGTTCCTCTTAGGTCAGATGGAGGTTCTCAGAGCCAAGTCCTCCCTCTCTACTGGAGTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| 3UTR-3UTR TCA 90 bp | ACAATTGCACATGTCAAGCCATCAGCAAGGCGCATCACACAAAAGGCACCAAGATGCAGGGCAGGGCTCTaGGGGGCCCAAACCCCATTT | + |
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Preference number: 2 (lower is better) Translates to: TIAHVKPSARRITQKAPRCRAGL*GAQTPF Trigger: AAATGGGGTTTGGGCCCCTCAGAGCCCTGCCCTGCA...TCTTGGTGCCTTTTGTGTGATGCGCCTTGCTGATGGCTTGACATGTGCAATTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| 3UTR-3UTR TCA 90 bp | TCCCTCACAATTGCACATGTCAAGCCATCAGCAAGGCGCATCACACAAAAGGCAGGGAGGACTTGGCTCTaGGAACCTCCATCTGACCTA | + |
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Preference number: 2 (lower is better) Translates to: SLTIAHVKPSARRITQKAGRTWL*EPPSDL Trigger: TAGGTCAGATGGAGGTTCTCAGAGCCAAGTCCTCCC...TGCCTTTTGTGTGATGCGCCTTGCTGATGGCTTGACATGTGCAATTGTGAGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| 3UTR CAA 90 bp | AAAGGGAATAGTAATTGGGGAAGGGGAAGTGGGCAGAAAGGATTGTaGGCCAATAGACCTTCCACTCCAGTAGAGAGGGAGGACTTGGCT | + |
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Preference number: 2 (lower is better) Translates to: KGNSNWGRGSGQKGL*ANRPSTPVEREDLA Trigger: AGCCAAGTCCTCCCTCTCTACTGGAGTGGAAGGTCTATTGGCCAACAATCCTTTCTGCCCACTTCCCCTTCCCCAATTACTATTCCCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| 3UTR-3UTR TCA 90 bp | AGCCATCAGCAAGGCGCATCACACAAAAGGCACCAAGACGTGAAACTTTTTAAACTGAGAACCTCCATCTaGCCTAAGAGGAACCCTCCT | + |
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Preference number: 2 (lower is better) Translates to: SHQQGASHKRHQDVKLFKLRTSI*PKRNPP Trigger: AGGAGGGTTCCTCTTAGGTCAGATGGAGGTTCTCAG...TTTAAAAAGTTTCACGTCTTGGTGCCTTTTGTGTGATGCGCCTTGCTGATGGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| 3UTR-3UTR CCA 90 bp | AAATCAAGTTCTTTGGATAGAGGTGAAGAACTTGGACATGGCTGTTTCAGGCAGAAAGGGAATAGTAATTaGGGAAGGGGAAGTGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: KSSSLDRGEELGHGCFRQKGNSN*GRGSGQ Trigger: CTGCCCACTTCCCCTTCCCCAATTACTATTCCCTTT...CTGCCTGAAACAGCCATGTCCAAGTTCTTCACCTCTATCCAAAGAACTTGATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| 3UTR-3UTR CCA 90 bp | CTTATTGTCACAGCATCATCACAAAATAGAGGATCACCATTGGTTTGCTTGGCTGGCAGAAAGGATTGTTaGCCAATAGACCTTCCACTC | + |
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Preference number: 2 (lower is better) Translates to: LIVTASSQNRGSPLVCLAGRKDC*PIDLPL Trigger: GAGTGGAAGGTCTATTGGCCAACAATCCTTTCTGCC...AGCCAAGCAAACCAATGGTGATCCTCTATTTTGTGATGATGCTGTGACAATAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| 3UTR-3UTR CCA 90 bp | AGCCATCAGCAAGGCGCATCACACAAAAGGCACCAAGACGTGAAACTTTTTAAAGAAAAACGAAATCCATaGCACAGACACTGTACAAGG | + |
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Preference number: 2 (lower is better) Translates to: SHQQGASHKRHQDVKLFKEKRNP*HRHCTR Trigger: CCTTGTACAGTGTCTGTGCCATGGATTTCGTTTTTC...TTTAAAAAGTTTCACGTCTTGGTGCCTTTTGTGTGATGCGCCTTGCTGATGGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| 3UTR TCA 72 bp | GTAGAGAGGGAGGACTTGGCTCTGAGAACCTCCATCTaGCCTAAGAGGAACCCTCCTCTCCTATGGCCATCT | + |
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Preference number: 3 (lower is better) Translates to: VEREDLALRTSI*PKRNPPLLWPS Trigger: AGATGGCCATAGGAGAGGAGGGTTCCTCTTAGGTCAGATGGAGGTTCTCAGAGCCAAGTCCTCCCTCTCTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| 3UTR-3UTR CAA 90 bp | GAACTTGGACATGGCTGTTTCAGGCAGCTGAAGTCAAAGGGAATAGTAATTGGGGTAGAGAGGGAGGACTaGGCTCTGAGAACCTCCATC | + |
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Preference number: 3 (lower is better) Translates to: ELGHGCFRQLKSKGIVIGVERED*ALRTSI Trigger: GATGGAGGTTCTCAGAGCCAAGTCCTCCCTCTCTAC...CCCAATTACTATTCCCTTTGACTTCAGCTGCCTGAAACAGCCATGTCCAAGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| 3UTR-3UTR CAA 90 bp | AGTACCCCAAGAAAAACGAAATCCATGGCACAGACACTGTACAAGGGTGCAGGGCTCGATTTTCTAGCATaGAAGGGAGCAAGGGGTCAG | + |
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Preference number: 3 (lower is better) Translates to: STPRKTKSMAQTLYKGAGLDFLA*KGARGQ Trigger: CTGACCCCTTGCTCCCTTCAATGCTAGAAAATCGAG...CCCTGCACCCTTGTACAGTGTCTGTGCCATGGATTTCGTTTTTCTTGGGGTACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| 3UTR CCA 72 bp | TTCACATCAAGAGTACCCCAAGAAAAACGAAATCCATaGCACAGACACTGTACAAGGGTGCAGGGCAGGGCT | + |
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Preference number: 3 (lower is better) Translates to: FTSRVPQEKRNP*HRHCTRVQGRA Trigger: AGCCCTGCCCTGCACCCTTGTACAGTGTCTGTGCCATGGATTTCGTTTTTCTTGGGGTACTCTTGATGTGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| 3UTR-3UTR CAA 90 bp | CTTATTGTCACAGCATCATCACAAAATAGAGGATCACCATTGGTTTGCTTGGCTGGGCAGAAAGGATTGTaGGCCAATAGACCTTCCACT | + |
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Preference number: 3 (lower is better) Translates to: LIVTASSQNRGSPLVCLAGQKGL*ANRPST Trigger: AGTGGAAGGTCTATTGGCCAACAATCCTTTCTGCCC...AGCCAAGCAAACCAATGGTGATCCTCTATTTTGTGATGATGCTGTGACAATAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| 3UTR-3UTR CAA 90 bp | GATTTTCTAGCATTGAAGGGAGCAAGGGGTCAGGCATATGATGGAGATGATACTTGCAAATCAAGTTCTTaGGATAGAGGTGAAGAACTT | + |
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Preference number: 3 (lower is better) Translates to: DFLALKGARGQAYDGDDTCKSSS*DRGEEL Trigger: AAGTTCTTCACCTCTATCCAAAGAACTTGATTTGCA...AGTATCATCTCCATCATATGCCTGACCCCTTGCTCCCTTCAATGCTAGAAAATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| 3UTR-3UTR CAA 90 bp | CCACATATCCCATGGGCAATAAAGCGCATTCAATGTGTTTATAAGCCAAACAGTAAACCAAACCATATTTaGCCACATGTGAGAGTACGG | + |
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Preference number: 3 (lower is better) Translates to: PHIPWAIKRIQCVYKPNSKPNHI*PHVRVR Trigger: CCGTACTCTCACATGTGGCAAAATATGGTTTGGTTT...ACTGTTTGGCTTATAAACACATTGAATGCGCTTTATTGCCCATGGGATATGTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS-3UTR CCA 90 bp | CAGAAAGGATTGTTGGCCAATAGACCTTCCACTCCAGTAGAGAGGGAGGACTTGTGCGCAGCTCAGGGGTaGGCTCTGGGAGGCGGAGGC | + |
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Preference number: 4 (lower is better) Translates to: QKGLLANRPSTPVEREDLCAAQG*ALGGGG Trigger: GCCTCCGCCTCCCAGAGCCCACCCCTGAGCTGCGCA...CAAGTCCTCCCTCTCTACTGGAGTGGAAGGTCTATTGGCCAACAATCCTTTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS-3UTR GCA 90 bp | GGAAGTGGGCAGAAAGGATTGTTGGCCAATAGACCTTCCACTCCAGTAGAGAGGGCTTCTGGTCTGGGGTaGCCAGGCCCAGATCCCCCT | + |
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Preference number: 4 (lower is better) Translates to: GSGQKGLLANRPSTPVERASGLG*PGPDPP Trigger: AGGGGGATCTGGGCCTGGGCACCCCAGACCAGAAGC...CCTCTCTACTGGAGTGGAAGGTCTATTGGCCAACAATCCTTTCTGCCCACTTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS-3UTR CCA 90 bp | TACCCCAAGAAAAACGAAATCCATGGCACAGACACTGTACAAGGGTGCAGGGCATGGCCGCGGCCATCCTaGACGAGCAGGCTGGAGAGC | + |
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Preference number: 4 (lower is better) Translates to: YPKKNEIHGTDTVQGCRAWPRPS*TSRLES Trigger: GCTCTCCAGCCTGCTCGTCCAGGATGGCCGCGGCCA...TGCCCTGCACCCTTGTACAGTGTCTGTGCCATGGATTTCGTTTTTCTTGGGGTA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS-3UTR CCA 90 bp | GGAAGTGGGCAGAAAGGATTGTTGGCCAATAGACCTTCCACTCCAGTAGAGAGGCCTGGAAGCCACCCTTaGCGGCAGGGTAGGCAGGAG | + |
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Preference number: 4 (lower is better) Translates to: GSGQKGLLANRPSTPVERPGSHP*RQGRQE Trigger: CTCCTGCCTACCCTGCCGCCAAGGGTGGCTTCCAGG...CCTCTCTACTGGAGTGGAAGGTCTATTGGCCAACAATCCTTTCTGCCCACTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS-3UTR GCA 90 bp | CAGAAAGGATTGTTGGCCAATAGACCTTCCACTCCAGTAGAGAGGGAGGACTTGTGCTGCTGCTGCTGTTaGTGCCGCTGCCCTCTGGGG | + |
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Preference number: 4 (lower is better) Translates to: QKGLLANRPSTPVEREDLCCCCC*CRCPLG Trigger: CCCCAGAGGGCAGCGGCAGCAACAGCAGCAGCAGCA...CAAGTCCTCCCTCTCTACTGGAGTGGAAGGTCTATTGGCCAACAATCCTTTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS-3UTR GCA 90 bp | ACTTGGACATGGCTGTTTCAGGCAGCTGAAGTCAAAGGGAATAGTAATTGGGGACTGGAGCGCTGTCCCTaGCGAGCCCGGGAAGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: TWTWLFQAAEVKGNSNWGLERCP*RAREGL Trigger: CAGGCCTTCCCGGGCTCGGCAGGGACAGCGCTCCAG...TCCCCAATTACTATTCCCTTTGACTTCAGCTGCCTGAAACAGCCATGTCCAAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS-3UTR CCA 90 bp | CAAGAGTACCCCAAGAAAAACGAAATCCATGGCACAGACACTGTACAAGGGTGCACAGTTGCGGGGGCCTaGCCGGGTTACATGCGGGGC | + |
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Preference number: 4 (lower is better) Translates to: QEYPKKNEIHGTDTVQGCTVAGA*PGYMRG Trigger: GCCCCGCATGTAACCCGGCCAGGCCCCCGCAACTGT...GCACCCTTGTACAGTGTCTGTGCCATGGATTTCGTTTTTCTTGGGGTACTCTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS-3UTR CCA 90 bp | CAAGAGTACCCCAAGAAAAACGAAATCCATGGCACAGACACTGTACAAGGGTGCGGTGCAGCCCGGGGCTaGAGCTGCAGGGGACACAGT | + |
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Preference number: 4 (lower is better) Translates to: QEYPKKNEIHGTDTVQGCGAARG*SCRGHS Trigger: ACTGTGTCCCCTGCAGCTCCAGCCCCGGGCTGCACC...GCACCCTTGTACAGTGTCTGTGCCATGGATTTCGTTTTTCTTGGGGTACTCTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS-3UTR CCA 90 bp | ACAATTGCACATGTCAAGCCATCAGCAAGGCGCATCACACAAAAGGCACCAAGAGCTGCATCTCGGCCTTaGCCGCGGCCATCCTGGACG | + |
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Preference number: 4 (lower is better) Translates to: TIAHVKPSARRITQKAPRAASRP*PRPSWT Trigger: CGTCCAGGATGGCCGCGGCCAAGGCCGAGATGCAGC...TCTTGGTGCCTTTTGTGTGATGCGCCTTGCTGATGGCTTGACATGTGCAATTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS-3UTR CCA 90 bp | CAGAAAGGATTGTTGGCCAATAGACCTTCCACTCCAGTAGAGAGGGAGGACTTGCAGAGGAGTACGTGGTaGCCACCGACGGGGAGGGGA | + |
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Preference number: 4 (lower is better) Translates to: QKGLLANRPSTPVEREDLQRSTW*PPTGRG Trigger: TCCCCTCCCCGTCGGTGGCCACCACGTACTCCTCTG...CAAGTCCTCCCTCTCTACTGGAGTGGAAGGTCTATTGGCCAACAATCCTTTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS-3UTR TCA 90 bp | TCCCTCACAATTGCACATGTCAAGCCATCAGCAAGGCGCATCACACAAAAGGCATGCAGGGCAGGGCTCTaGGGGGCCCAAACCCCATTT | + |
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Preference number: 4 (lower is better) Translates to: SLTIAHVKPSARRITQKACRAGL*GAQTPF Trigger: AAATGGGGTTTGGGCCCCTCAGAGCCCTGCCCTGCA...TGCCTTTTGTGTGATGCGCCTTGCTGATGGCTTGACATGTGCAATTGTGAGGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS-3UTR GCA 90 bp | AGCCATCAGCAAGGCGCATCACACAAAAGGCACCAAGACGTGAAACTTTTTAAAGCCCGGGGCTGGAGCTaGAGGGGACACAGTTGCGGG | + |
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Preference number: 4 (lower is better) Translates to: SHQQGASHKRHQDVKLFKARGWS*RGHSCG Trigger: CCCGCAACTGTGTCCCCTGCAGCTCCAGCCCCGGGC...TTTAAAAAGTTTCACGTCTTGGTGCCTTTTGTGTGATGCGCCTTGCTGATGGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS-3UTR CCA 90 bp | AGCCATCAGCAAGGCGCATCACACAAAAGGCACCAAGACGTGAAACTTTTTAAAGCGGCGCCGAGGAACTaGGGAGCCCCGTTGCTCAGC | + |
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Preference number: 4 (lower is better) Translates to: SHQQGASHKRHQDVKLFKAAPRN*GAPLLS Trigger: GCTGAGCAACGGGGCTCCCCAGTTCCTCGGCGCCGC...TTTAAAAAGTTTCACGTCTTGGTGCCTTTTGTGTGATGCGCCTTGCTGATGGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS-3UTR CCA 90 bp | GGAAGTGGGCAGAAAGGATTGTTGGCCAATAGACCTTCCACTCCAGTAGAGAGGAGGAGGCCGGTGGGTTaGTCATGCTCACTAGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: GSGQKGLLANRPSTPVERRRPVG*SCSLGH Trigger: GTGGCCTAGTGAGCATGACCAACCCACCGGCCTCCT...CCTCTCTACTGGAGTGGAAGGTCTATTGGCCAACAATCCTTTCTGCCCACTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS-3UTR CCA 90 bp | GGAAGTGGGCAGAAAGGATTGTTGGCCAATAGACCTTCCACTCCAGTAGAGAGGGAGCCCGGGAAGGCCTaGCTTTGTGGCTCAGGGAAA | + |
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Preference number: 4 (lower is better) Translates to: GSGQKGLLANRPSTPVEREPGKA*LCGSGK Trigger: TTTCCCTGAGCCACAAAGCCAGGCCTTCCCGGGCTC...CCTCTCTACTGGAGTGGAAGGTCTATTGGCCAACAATCCTTTCTGCCCACTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS-3UTR CCA 90 bp | TCCCTCACAATTGCACATGTCAAGCCATCAGCAAGGCGCATCACACAAAAGGCAGAAGGGCTTCTGGTCTaGGGTGCCCAGGCCCAGATC | + |
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Preference number: 4 (lower is better) Translates to: SLTIAHVKPSARRITQKAEGLLV*GAQAQI Trigger: GATCTGGGCCTGGGCACCCCAGACCAGAAGCCCTTC...TGCCTTTTGTGTGATGCGCCTTGCTGATGGCTTGACATGTGCAATTGTGAGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS-3UTR CCA 90 bp | AGTACCCCAAGAAAAACGAAATCCATGGCACAGACACTGTACAAGGGTGCAGGGACTGTGCACAGGGGATaGGTAGGTCGAGGAGCCGGG | + |
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Preference number: 4 (lower is better) Translates to: STPRKTKSMAQTLYKGAGTVHRG*VGRGAG Trigger: CCCGGCTCCTCGACCTACCCATCCCCTGTGCACAGT...CCCTGCACCCTTGTACAGTGTCTGTGCCATGGATTTCGTTTTTCTTGGGGTACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS-3UTR TCA 90 bp | ATCTTCACATCAAGAGTACCCCAAGAAAAACGAAATCCATGGCACAGACACTGTGGGCGCGGGGAACACTaGGAAGCGTGCAGGCGGCGA | + |
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Preference number: 4 (lower is better) Translates to: IFTSRVPQEKRNPWHRHCGRGEH*EACRRR Trigger: TCGCCGCCTGCACGCTTCTCAGTGTTCCCCGCGCCC...ACAGTGTCTGTGCCATGGATTTCGTTTTTCTTGGGGTACTCTTGATGTGAAGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS-3UTR TCA 90 bp | CAGAAAGGATTGTTGGCCAATAGACCTTCCACTCCAGTAGAGAGGGAGGACTTGTCCATGGTGGGCGAGTaGGGAAAGGATCCGAACGGG | + |
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Preference number: 4 (lower is better) Translates to: QKGLLANRPSTPVEREDLSMVGE*GKDPNG Trigger: CCCGTTCGGATCCTTTCCTCACTCGCCCACCATGGA...CAAGTCCTCCCTCTCTACTGGAGTGGAAGGTCTATTGGCCAACAATCCTTTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS-3UTR TCA 90 bp | GAACTTGGACATGGCTGTTTCAGGCAGCTGAAGTCAAAGGGAATAGTAATTGGGTCGCCCGTGTCCGCCTaGGGGTTGAAGGTGCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: ELGHGCFRQLKSKGIVIGSPVSA*GLKVLL Trigger: CAGCAGCACCTTCAACCCTCAGGCGGACACGGGCGA...CCCAATTACTATTCCCTTTGACTTCAGCTGCCTGAAACAGCCATGTCCAAGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS-3UTR GCA 90 bp | ACTTGGACATGGCTGTTTCAGGCAGCTGAAGTCAAAGGGAATAGTAATTGGGGAAGCGGGGACATCAGCTaGATCTCGGCCTTGGCCGCG | + |
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Preference number: 4 (lower is better) Translates to: TWTWLFQAAEVKGNSNWGSGDIS*ISALAA Trigger: CGCGGCCAAGGCCGAGATGCAGCTGATGTCCCCGCT...TCCCCAATTACTATTCCCTTTGACTTCAGCTGCCTGAAACAGCCATGTCCAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS-3UTR GCA 90 bp | GATTTTCTAGCATTGAAGGGAGCAAGGGGTCAGGCATATGATGGAGATGATACTTGCTGCTGCTGTTGCTaGCGCTGCCCTCTGGGGCCC | + |
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Preference number: 4 (lower is better) Translates to: DFLALKGARGQAYDGDDTCCCCC*RCPLGP Trigger: GGGCCCCAGAGGGCAGCGGCAGCAACAGCAGCAGCA...AGTATCATCTCCATCATATGCCTGACCCCTTGCTCCCTTCAATGCTAGAAAATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS-3UTR GCA 90 bp | AGTACCCCAAGAAAAACGAAATCCATGGCACAGACACTGTACAAGGGTGCAGGGCGGGCCACAAGGTGTTaGCACTGTTGGGTGCAGGCT | + |
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Preference number: 4 (lower is better) Translates to: STPRKTKSMAQTLYKGAGRATRC*HCWVQA Trigger: AGCCTGCACCCAACAGTGGCAACACCTTGTGGCCCG...CCCTGCACCCTTGTACAGTGTCTGTGCCATGGATTTCGTTTTTCTTGGGGTACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS-3UTR CCA 90 bp | TCCCTCACAATTGCACATGTCAAGCCATCAGCAAGGCGCATCACACAAAAGGCATCGGCGTGGGGAAGGTaGGTGCCGCTGAGTAAATGG | + |
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Preference number: 4 (lower is better) Translates to: SLTIAHVKPSARRITQKASAWGR*VPLSKW Trigger: CCATTTACTCAGCGGCACCCACCTTCCCCACGCCGA...TGCCTTTTGTGTGATGCGCCTTGCTGATGGCTTGACATGTGCAATTGTGAGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS-3UTR CCA 90 bp | GATTTTCTAGCATTGAAGGGAGCAAGGGGTCAGGCATATGATGGAGATGATACTGCAGGAGGCGGGTACTaGAGCGCTGTCCCTGCCGAG | + |
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Preference number: 4 (lower is better) Translates to: DFLALKGARGQAYDGDDTAGGGY*SAVPAE Trigger: CTCGGCAGGGACAGCGCTCCAGTACCCGCCTCCTGC...AGTATCATCTCCATCATATGCCTGACCCCTTGCTCCCTTCAATGCTAGAAAATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS-3UTR TCA 90 bp | GAACTTGGACATGGCTGTTTCAGGCAGCTGAAGTCAAAGGGAATAGTAATTGGGAGGAAGGGAAGCTGCTaGCCTGGGCCGGGAAAGCAG | + |
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Preference number: 4 (lower is better) Translates to: ELGHGCFRQLKSKGIVIGRKGSC*PGPGKQ Trigger: CTGCTTTCCCGGCCCAGGTCAGCAGCTTCCCTTCCT...CCCAATTACTATTCCCTTTGACTTCAGCTGCCTGAAACAGCCATGTCCAAGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS-3UTR GCA 90 bp | GGAAGTGGGCAGAAAGGATTGTTGGCCAATAGACCTTCCACTCCAGTAGAGAGGGTCAGGAAAAGACTCTaGGGTCAGGTGCTCGTAGGG | + |
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Preference number: 4 (lower is better) Translates to: GSGQKGLLANRPSTPVERVRKRL*GQVLVG Trigger: CCCTACGAGCACCTGACCGCAGAGTCTTTTCCTGAC...CCTCTCTACTGGAGTGGAAGGTCTATTGGCCAACAATCCTTTCTGCCCACTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS-3UTR CCA 90 bp | ACAATTGCACATGTCAAGCCATCAGCAAGGCGCATCACACAAAAGGCACCAAGAACTGCTGTCGTTGGATaGCACTGCGCAGCTCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: TIAHVKPSARRITQKAPRTAVVG*HCAAQG Trigger: CCCCTGAGCTGCGCAGTGCCATCCAACGACAGCAGT...TCTTGGTGCCTTTTGTGTGATGCGCCTTGCTGATGGCTTGACATGTGCAATTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS-3UTR CCA 90 bp | CAGAAAGGATTGTTGGCCAATAGACCTTCCACTCCAGTAGAGAGGGAGGACTTGTGGGACTGCTGTCGTTaGATGGCACTGCGCAGCTCA | + |
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Preference number: 4 (lower is better) Translates to: QKGLLANRPSTPVEREDLWDCCR*MALRSS Trigger: TGAGCTGCGCAGTGCCATCCAACGACAGCAGTCCCA...CAAGTCCTCCCTCTCTACTGGAGTGGAAGGTCTATTGGCCAACAATCCTTTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS-3UTR CCA 90 bp | ACTTGGACATGGCTGTTTCAGGCAGCTGAAGTCAAAGGGAATAGTAATTGGGGATGTCAGTGTTCGGCGTaGGGAAGGTGGGTGCCGCTG | + |
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Preference number: 4 (lower is better) Translates to: TWTWLFQAAEVKGNSNWGCQCSA*GRWVPL Trigger: CAGCGGCACCCACCTTCCCCACGCCGAACACTGACA...TCCCCAATTACTATTCCCTTTGACTTCAGCTGCCTGAAACAGCCATGTCCAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS-3UTR CCA 90 bp | GATTTTCTAGCATTGAAGGGAGCAAGGGGTCAGGCATATGATGGAGATGATACTGTTAGCGAAGGCTGCTaGGTGCGGCTCTCCAGGCCC | + |
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Preference number: 4 (lower is better) Translates to: DFLALKGARGQAYDGDDTVSEGC*VRLSRP Trigger: GGGCCTGGAGAGCCGCACCCAGCAGCCTTCGCTAAC...AGTATCATCTCCATCATATGCCTGACCCCTTGCTCCCTTCAATGCTAGAAAATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS-3UTR TCA 90 bp | GGAAGTGGGCAGAAAGGATTGTTGGCCAATAGACCTTCCACTCCAGTAGAGAGGCTGAGAACCTCCATCTaGCCTAAGAGGAACCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GSGQKGLLANRPSTPVERLRTSI*PKRNPP Trigger: AGGAGGGTTCCTCTTAGGTCAGATGGAGGTTCTCAG...CCTCTCTACTGGAGTGGAAGGTCTATTGGCCAACAATCCTTTCTGCCCACTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000239938.5 |
||
| CDS-3UTR TCA 90 bp | CAGAAAGGATTGTTGGCCAATAGACCTTCCACTCCAGTAGAGAGGGAGGACTTGGGGAGGACTTGGCTCTaGGAACCTCCATCTGACCTA | + |
|
Preference number: 4 (lower is better) Translates to: QKGLLANRPSTPVEREDLGRTWL*EPPSDL Trigger: TAGGTCAGATGGAGGTTCTCAGAGCCAAGTCCTCCC...CAAGTCCTCCCTCTCTACTGGAGTGGAAGGTCTATTGGCCAACAATCCTTTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239938.5 |
||
| CDS-3UTR GCA 90 bp | CCACATATCCCATGGGCAATAAAGCGCATTCAATGTGTTTATAAGCCAAACAGTCCTGGCCGGGTTACATaGGGGGCGCGGGGAACACTG | + |
|
Preference number: 4 (lower is better) Translates to: PHIPWAIKRIQCVYKPNSPGRVT*GARGTL Trigger: CAGTGTTCCCCGCGCCCCGCATGTAACCCGGCCAGG...ACTGTTTGGCTTATAAACACATTGAATGCGCTTTATTGCCCATGGGATATGTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000239938.5 |
||
| CDS-3UTR GCA 90 bp | AAATCAAGTTCTTTGGATAGAGGTGAAGAACTTGGACATGGCTGTTTCAGGCAGGGGGTTAGCGAAGGCTaGTGGGTGCGGCTCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KSSSLDRGEELGHGCFRQGVSEG*WVRLSR Trigger: CCTGGAGAGCCGCACCCAGCAGCCTTCGCTAACCCC...CTGCCTGAAACAGCCATGTCCAAGTTCTTCACCTCTATCCAAAGAACTTGATTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000239938.5 |
||
| CDS-3UTR CCA 90 bp | ACTTGGACATGGCTGTTTCAGGCAGCTGAAGTCAAAGGGAATAGTAATTGGGGAGGGATCATGGGAACCTaGAAGCCACCCTTGGCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TWTWLFQAAEVKGNSNWGGIMGT*KPPLAA Trigger: TGCCGCCAAGGGTGGCTTCCAGGTTCCCATGATCCC...TCCCCAATTACTATTCCCTTTGACTTCAGCTGCCTGAAACAGCCATGTCCAAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239938.5 |
||
| CDS-3UTR CCA 90 bp | CAAGAGTACCCCAAGAAAAACGAAATCCATGGCACAGACACTGTACAAGGGTGCATGCAGATGCGGCACTaGAAGGGCTTCTGGCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: QEYPKKNEIHGTDTVQGCMQMRH*KGFWPV Trigger: CACAGGCCAGAAGCCCTTCCAGTGCCGCATCTGCAT...GCACCCTTGTACAGTGTCTGTGCCATGGATTTCGTTTTTCTTGGGGTACTCTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000239938.5 |
||
| CDS-3UTR TCA 90 bp | ACAATTGCACATGTCAAGCCATCAGCAAGGCGCATCACACAAAAGGCACCAAGATCCTGGGAGCCCGACTaGGTGGCAAAGGCCTTAATA | + |
|
Preference number: 4 (lower is better) Translates to: TIAHVKPSARRITQKAPRSWEPD*VAKALI Trigger: TATTAAGGCCTTTGCCACTCAGTCGGGCTCCCAGGA...TCTTGGTGCCTTTTGTGTGATGCGCCTTGCTGATGGCTTGACATGTGCAATTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239938.5 |
||
| CDS-3UTR GCA 90 bp | AGTACCCCAAGAAAAACGAAATCCATGGCACAGACACTGTACAAGGGTGCAGGGCCTGGGAGAAAAGGTTaGTGTCATGTCCGAAAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: STPRKTKSMAQTLYKGAGPGRKG*CHVRKP Trigger: GGGCTTTCGGACATGACAGCAACCTTTTCTCCCAGG...CCCTGCACCCTTGTACAGTGTCTGTGCCATGGATTTCGTTTTTCTTGGGGTACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000239938.5 |
||
| CDS-3UTR CCA 90 bp | CAGAAAGGATTGTTGGCCAATAGACCTTCCACTCCAGTAGAGAGGGAGGACTTGTTTGGCTGGGGTAACTaGTCTCCACCAGCACCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QKGLLANRPSTPVEREDLFGWGN*SPPAPS Trigger: AGAAGGTGCTGGTGGAGACCAGTTACCCCAGCCAAA...CAAGTCCTCCCTCTCTACTGGAGTGGAAGGTCTATTGGCCAACAATCCTTTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239938.5 |
||
| CDS-3UTR CCA 90 bp | GGAAGTGGGCAGAAAGGATTGTTGGCCAATAGACCTTCCACTCCAGTAGAGAGGGCCGCAAGTGGATCTTaGTATGCCTCTTGCGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: GSGQKGLLANRPSTPVERAASGS*YASCVH Trigger: ATGAACGCAAGAGGCATACCAAGATCCACTTGCGGC...CCTCTCTACTGGAGTGGAAGGTCTATTGGCCAACAATCCTTTCTGCCCACTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000239938.5 |
||
| CDS-3UTR CCA 90 bp | CAAGAGTACCCCAAGAAAAACGAAATCCATGGCACAGACACTGTACAAGGGTGCAAGAGAGAGAGGAGGTaGCCGAAGAGGCCACAACAC | + |
|
Preference number: 4 (lower is better) Translates to: QEYPKKNEIHGTDTVQGCKRERR*PKRPQH Trigger: GTGTTGTGGCCTCTTCGGCCACCTCCTCTCTCTCTT...GCACCCTTGTACAGTGTCTGTGCCATGGATTTCGTTTTTCTTGGGGTACTCTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000239938.5 |
||
| CDS-3UTR CCA 90 bp | ACTTGGACATGGCTGTTTCAGGCAGCTGAAGTCAAAGGGAATAGTAATTGGGGAGGGATGGGTATGAGGTaGTGGCCGGGGATGGATAAG | + |
|
Preference number: 4 (lower is better) Translates to: TWTWLFQAAEVKGNSNWGGMGMR*WPGMDK Trigger: CTTATCCATCCCCGGCCACCACCTCATACCCATCCC...TCCCCAATTACTATTCCCTTTGACTTCAGCTGCCTGAAACAGCCATGTCCAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000239938.5 |
||
| CDS-3UTR CCA 90 bp | ATCTTCACATCAAGAGTACCCCAAGAAAAACGAAATCCATGGCACAGACACTGTGAACAGAGGAGTACGTaGTGGCCACCGACGGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: IFTSRVPQEKRNPWHRHCEQRST*WPPTGR Trigger: CCTCCCCGTCGGTGGCCACCACGTACTCCTCTGTTC...ACAGTGTCTGTGCCATGGATTTCGTTTTTCTTGGGGTACTCTTGATGTGAAGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000239938.5 |
||
| 3UTR CAA 72 bp | AGTAATTGGGGAAGGGGAAGTGGGCAGAAAGGATTGTaGGCCAATAGACCTTCCACTCCAGTAGAGAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SNWGRGSGQKGL*ANRPSTPVERE Trigger: CTCCCTCTCTACTGGAGTGGAAGGTCTATTGGCCAACAATCCTTTCTGCCCACTTCCCCTTCCCCAATTACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000239938.5 |
||
| CDS-3UTR TCA 90 bp | GATTTTCTAGCATTGAAGGGAGCAAGGGGTCAGGCATATGATGGAGATGATACTGAAGGTGGGTGCCGCTaGGTAAATGGGACTGCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: DFLALKGARGQAYDGDDTEGGCR*VNGTAV Trigger: GACAGCAGTCCCATTTACTCAGCGGCACCCACCTTC...AGTATCATCTCCATCATATGCCTGACCCCTTGCTCCCTTCAATGCTAGAAAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000239938.5 |
||
| CDS-3UTR GCA 90 bp | GATTTTCTAGCATTGAAGGGAGCAAGGGGTCAGGCATATGATGGAGATGATACTACTGGGGAGCCCCGTTaGTCAGCAGCATCATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: DFLALKGARGQAYDGDDTTGEPR*SAASSP Trigger: AGGAGATGATGCTGCTGAGCAACGGGGCTCCCCAGT...AGTATCATCTCCATCATATGCCTGACCCCTTGCTCCCTTCAATGCTAGAAAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000239938.5 |
||
| CDS-3UTR GCA 90 bp | CCACATATCCCATGGGCAATAAAGCGCATTCAATGTGTTTATAAGCCAAACAGTGTCGTTGGATGGCACTaGGCAGCTCAGGGGTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: PHIPWAIKRIQCVYKPNSVVGWH*AAQGWA Trigger: AGCCCACCCCTGAGCTGCGCAGTGCCATCCAACGAC...ACTGTTTGGCTTATAAACACATTGAATGCGCTTTATTGCCCATGGGATATGTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239938.5 |
||
| CDS-3UTR GCA 90 bp | TCCCTCACAATTGCACATGTCAAGCCATCAGCAAGGCGCATCACACAAAAGGCACTGAGTAAATGGGACTaGTGTCGTTGGATGGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: SLTIAHVKPSARRITQKALSKWD*CRWMAL Trigger: CAGTGCCATCCAACGACAGCAGTCCCATTTACTCAG...TGCCTTTTGTGTGATGCGCCTTGCTGATGGCTTGACATGTGCAATTGTGAGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239938.5 |
||
| CDS-3UTR CCA 90 bp | GATTTTCTAGCATTGAAGGGAGCAAGGGGTCAGGCATATGATGGAGATGATACTGGTAGTCGGGGATCATaGGAACCTGGAAGCCACCCT | + |
|
Preference number: 4 (lower is better) Translates to: DFLALKGARGQAYDGDDTGSRGS*EPGSHP Trigger: AGGGTGGCTTCCAGGTTCCCATGATCCCCGACTACC...AGTATCATCTCCATCATATGCCTGACCCCTTGCTCCCTTCAATGCTAGAAAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000239938.5 |
||
| CDS-3UTR CCA 90 bp | ACTTGGACATGGCTGTTTCAGGCAGCTGAAGTCAAAGGGAATAGTAATTGGGGAATCCCCCTGCTGCTGTaGAAACAGGTAGTCGGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: TWTWLFQAAEVKGNSNWGIPLLL*KQVVGD Trigger: ATCCCCGACTACCTGTTTCCACAGCAGCAGGGGGAT...TCCCCAATTACTATTCCCTTTGACTTCAGCTGCCTGAAACAGCCATGTCCAAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000239938.5 |
||
| CDS-3UTR CCA 90 bp | AGCCATCAGCAAGGCGCATCACACAAAAGGCACCAAGACGTGAAACTTTTTAAAGGTGGTGGCCGGGGATaGATAAGAGGTAGTAACCGG | + |
|
Preference number: 4 (lower is better) Translates to: SHQQGASHKRHQDVKLFKGGGRG*IRGSNR Trigger: CCGGTTACTACCTCTTATCCATCCCCGGCCACCACC...TTTAAAAAGTTTCACGTCTTGGTGCCTTTTGTGTGATGCGCCTTGCTGATGGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000239938.5 |
||
| CDS-3UTR CCA 90 bp | GAACTTGGACATGGCTGTTTCAGGCAGCTGAAGTCAAAGGGAATAGTAATTGGGATGGGTATGAGGTGGTaGCCGGGGATGGATAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ELGHGCFRQLKSKGIVIGMGMRW*PGMDKR Trigger: CCTCTTATCCATCCCCGGCCACCACCTCATACCCAT...CCCAATTACTATTCCCTTTGACTTCAGCTGCCTGAAACAGCCATGTCCAAGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239938.5 |
||
| CDS-3UTR TCA 90 bp | ATCTTCACATCAAGAGTACCCCAAGAAAAACGAAATCCATGGCACAGACACTGTACTGGTAGCTGGTATTaGGGGCCTTCAGGTCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: IFTSRVPQEKRNPWHRHCTGSWY*GPSGPG Trigger: CCCAGGACCTGAAGGCCCTCAATACCAGCTACCAGT...ACAGTGTCTGTGCCATGGATTTCGTTTTTCTTGGGGTACTCTTGATGTGAAGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000239938.5 |
||
| CDS-3UTR GCA 90 bp | ATCTTCACATCAAGAGTACCCCAAGAAAAACGAAATCCATGGCACAGACACTGTAACGGGTCAGAGATCTaGAGCGGGGACATCAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: IFTSRVPQEKRNPWHRHCNGSEI*SGDISC Trigger: GCAGCTGATGTCCCCGCTGCAGATCTCTGACCCGTT...ACAGTGTCTGTGCCATGGATTTCGTTTTTCTTGGGGTACTCTTGATGTGAAGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000239938.5 |
||
| CDS-3UTR GCA 90 bp | TCCCTCACAATTGCACATGTCAAGCCATCAGCAAGGCGCATCACACAAAAGGCAAAGTGGATCTTGGTATaGCTCTTGCGTTCATCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SLTIAHVKPSARRITQKAKWILV*LLRSSL Trigger: GAGCGATGAACGCAAGAGGCATACCAAGATCCACTT...TGCCTTTTGTGTGATGCGCCTTGCTGATGGCTTGACATGTGCAATTGTGAGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239938.5 |
||
| CDS-3UTR GCA 90 bp | CAGAAAGGATTGTTGGCCAATAGACCTTCCACTCCAGTAGAGAGGGAGGACTTGCATGTCCCTCACAATTaGACATGTCAAGCCATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QKGLLANRPSTPVEREDLHVPHN*TCQAIS Trigger: GCTGATGGCTTGACATGTGCAATTGTGAGGGACATG...CAAGTCCTCCCTCTCTACTGGAGTGGAAGGTCTATTGGCCAACAATCCTTTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000239938.5 |
||
| CDS-3UTR CCA 90 bp | ACTTGGACATGGCTGTTTCAGGCAGCTGAAGTCAAAGGGAATAGTAATTGGGGAGTGCCGCTGAGTAAATaGGACTGCTGTCGTTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: TWTWLFQAAEVKGNSNWGVPLSK*DCCRWM Trigger: CATCCAACGACAGCAGTCCCATTTACTCAGCGGCAC...TCCCCAATTACTATTCCCTTTGACTTCAGCTGCCTGAAACAGCCATGTCCAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS-3UTR CCA 90 bp | TCCCTCACAATTGCACATGTCAAGCCATCAGCAAGGCGCATCACACAAAAGGCATGCGTTCATCGCTCCTaGCAAACTTTCTTCCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: SLTIAHVKPSARRITQKACVHRS*QTFFHR Trigger: TCTGTGGAAGAAAGTTTGCCAGGAGCGATGAACGCA...TGCCTTTTGTGTGATGCGCCTTGCTGATGGCTTGACATGTGCAATTGTGAGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239938.5 |
||
| CDS-3UTR CCA 90 bp | CAAGAGTACCCCAAGAAAAACGAAATCCATGGCACAGACACTGTACAAGGGTGCTCCTTCTGCCGCAAGTaGATCTTGGTATGCCTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: QEYPKKNEIHGTDTVQGCSFCRK*ILVCLL Trigger: CAAGAGGCATACCAAGATCCACTTGCGGCAGAAGGA...GCACCCTTGTACAGTGTCTGTGCCATGGATTTCGTTTTTCTTGGGGTACTCTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000239938.5 |
||
| CDS-3UTR CCA 90 bp | TACCCCAAGAAAAACGAAATCCATGGCACAGACACTGTACAAGGGTGCAGGGCAGGCAGAAAGGATTGTTaGCCAATAGACCTTCCACTC | + |
|
Preference number: 4 (lower is better) Translates to: YPKKNEIHGTDTVQGCRAGRKDC*PIDLPL Trigger: GAGTGGAAGGTCTATTGGCCAACAATCCTTTCTGCC...TGCCCTGCACCCTTGTACAGTGTCTGTGCCATGGATTTCGTTTTTCTTGGGGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000239938.5 |
||
| CDS-3UTR CCA 90 bp | CAGAAAGGATTGTTGGCCAATAGACCTTCCACTCCAGTAGAGAGGGAGGACTTGAAAGGGAATAGTAATTaGGGAAGGGGAAGTGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QKGLLANRPSTPVEREDLKGNSN*GRGSGQ Trigger: CTGCCCACTTCCCCTTCCCCAATTACTATTCCCTTT...CAAGTCCTCCCTCTCTACTGGAGTGGAAGGTCTATTGGCCAACAATCCTTTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239938.5 |
||
| CDS-3UTR GCA 90 bp | CTTATTGTCACAGCATCATCACAAAATAGAGGATCACCATTGGTTTGCTTGGCTGTTGCCACTGTTGGGTaGAGGCTCCAGGGAAAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: LIVTASSQNRGSPLVCLAVATVG*RLQGKA Trigger: CGCTTTTCCCTGGAGCCTGCACCCAACAGTGGCAAC...AGCCAAGCAAACCAATGGTGATCCTCTATTTTGTGATGATGCTGTGACAATAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000239938.5 |
||
| CDS-3UTR CCA 90 bp | ACTTGGACATGGCTGTTTCAGGCAGCTGAAGTCAAAGGGAATAGTAATTGGGGAGAAGGCCTGGCTTTGTaGCTCAGGGAAAATGTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: TWTWLFQAAEVKGNSNWGEGLAL*LRENVS Trigger: ACTGACATTTTCCCTGAGCCACAAAGCCAGGCCTTC...TCCCCAATTACTATTCCCTTTGACTTCAGCTGCCTGAAACAGCCATGTCCAAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000239938.5 |
||
| CDS-3UTR TCA 90 bp | TCCCTCACAATTGCACATGTCAAGCCATCAGCAAGGCGCATCACACAAAAGGCAATATTTTGCCACATGTaGGAGTACGGTCAAGCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: SLTIAHVKPSARRITQKAIFCHM*EYGQAV Trigger: TACTGCTTGACCGTACTCTCACATGTGGCAAAATAT...TGCCTTTTGTGTGATGCGCCTTGCTGATGGCTTGACATGTGCAATTGTGAGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000239938.5 |
||
| CDS-3UTR CCA 90 bp | CTTATTGTCACAGCATCATCACAAAATAGAGGATCACCATTGGTTTGCTTGGCTGTCGAGTGGTTTGGCTaGGGTAACTGGTCTCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: LIVTASSQNRGSPLVCLAVEWFG*GNWSPP Trigger: TGGTGGAGACCAGTTACCCCAGCCAAACCACTCGAC...AGCCAAGCAAACCAATGGTGATCCTCTATTTTGTGATGATGCTGTGACAATAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239938.5 |
||
| CDS-3UTR CCA 90 bp | CTTATTGTCACAGCATCATCACAAAATAGAGGATCACCATTGGTTTGCTTGGCTATCACAGGACTCCACTaGGCAAGCGTAAGGGCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LIVTASSQNRGSPLVCLAITGLH*ASVRAF Trigger: GAACGCCCTTACGCTTGCCCAGTGGAGTCCTGTGAT...AGCCAAGCAAACCAATGGTGATCCTCTATTTTGTGATGATGCTGTGACAATAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239938.5 |
||
| CDS-3UTR CCA 90 bp | ACAATTGCACATGTCAAGCCATCAGCAAGGCGCATCACACAAAAGGCACCAAGAACACCACATATCCCATaGGCAATAAAGCGCATTCAA | + |
|
Preference number: 4 (lower is better) Translates to: TIAHVKPSARRITQKAPRTPHIP*AIKRIQ Trigger: TTGAATGCGCTTTATTGCCCATGGGATATGTGGTGT...TCTTGGTGCCTTTTGTGTGATGCGCCTTGCTGATGGCTTGACATGTGCAATTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239938.5 |
||
| CDS-3UTR TCA 90 bp | TCCCTCACAATTGCACATGTCAAGCCATCAGCAAGGCGCATCACACAAAAGGCAAAAGGCACCAAGACGTaGAACTTTTTAAACCAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SLTIAHVKPSARRITQKAKGTKT*NFLNQK Trigger: CTTTTGGTTTAAAAAGTTTCACGTCTTGGTGCCTTT...TGCCTTTTGTGTGATGCGCCTTGCTGATGGCTTGACATGTGCAATTGTGAGGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000239938.5 |
||
| CDS-3UTR GCA 90 bp | CTTATTGTCACAGCATCATCACAAAATAGAGGATCACCATTGGTTTGCTTGGCTTCTTGGTATGCCTCTTaGGTTCATCGCTCCTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LIVTASSQNRGSPLVCLASWYAS*VHRSWQ Trigger: TTGCCAGGAGCGATGAACGCAAGAGGCATACCAAGA...AGCCAAGCAAACCAATGGTGATCCTCTATTTTGTGATGATGCTGTGACAATAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239938.5 |
||
| CDS-3UTR GCA 90 bp | CTTATTGTCACAGCATCATCACAAAATAGAGGATCACCATTGGTTTGCTTGGCTGCTTTCTTGTCCTTCTaGCGCAAGTGGATCTTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: LIVTASSQNRGSPLVCLAAFLSF*RKWILV Trigger: TACCAAGATCCACTTGCGGCAGAAGGACAAGAAAGC...AGCCAAGCAAACCAATGGTGATCCTCTATTTTGTGATGATGCTGTGACAATAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239938.5 |
||
| CDS-3UTR GCA 90 bp | AAATCAAGTTCTTTGGATAGAGGTGAAGAACTTGGACATGGCTGTTTCAGGCAGCAACACTCTGACACATaGTCTGAGAATACTGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: KSSSLDRGEELGHGCFRQQHSDT*SENTGT Trigger: AGTCCCAGTATTCTCAGAGCATGTGTCAGAGTGTTG...CTGCCTGAAACAGCCATGTCCAAGTTCTTCACCTCTATCCAAAGAACTTGATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000239938.5 |
||
| CDS-3UTR CCA 90 bp | CCACATATCCCATGGGCAATAAAGCGCATTCAATGTGTTTATAAGCCAAACAGTTGTTTTCTTACATTCTaGAGAACCGAAGCTCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PHIPWAIKRIQCVYKPNSCFLTF*RTEAQL Trigger: GAGCTGAGCTTCGGTTCTCCAGAATGTAAGAAAACA...ACTGTTTGGCTTATAAACACATTGAATGCGCTTTATTGCCCATGGGATATGTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239938.5 |
||
| CDS-3UTR CCA 90 bp | CTTATTGTCACAGCATCATCACAAAATAGAGGATCACCATTGGTTTGCTTGGCTATAGAGGATCACCATTaGTTTGCTTGGCTTTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LIVTASSQNRGSPLVCLAIEDHH*FAWLFF Trigger: AAAGAAAAGCCAAGCAAACCAATGGTGATCCTCTAT...AGCCAAGCAAACCAATGGTGATCCTCTATTTTGTGATGATGCTGTGACAATAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000239938.5 |
||
| CDS GCA 90 bp | CTTGGCGGCAGGGTAGGCAGGAGGCGGGTACTGGAGCGCTGTCCCTaGCGAGCCCGGGAAGGCCTGGCTTTGTGGCTCAGGGAAAATGTC | + |
|
Preference number: 5 (lower is better) Translates to: LGGRVGRRRVLERCP*RAREGLALWLRENV Trigger: GACATTTTCCCTGAGCCACAAAGCCAGGCCTTCCCGGGCTCGGCAGGGACAGCGCTCCAGTACCCGCCTCCTGCCTACCCTGCCGCCAAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239938.5 |
||
| CDS CCA 90 bp | ACGGGTCAGAGATCTGCAGCGGGGACATCAGCTGCATCTCGGCCTTaGCCGCGGCCATCCTGGACGAGCAGGCTGGAGAGCTGGTGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: TGQRSAAGTSAASRP*PRPSWTSRLESWCR Trigger: CCGACACCAGCTCTCCAGCCTGCTCGTCCAGGATGGCCGCGGCCAAGGCCGAGATGCAGCTGATGTCCCCGCTGCAGATCTCTGACCCGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239938.5 |
||
| CDS CCA 90 bp | GGAGGCGGGTACTGGAGCGCTGTCCCTGCCGAGCCCGGGAAGGCCTaGCTTTGTGGCTCAGGGAAAATGTCAGTGTTCGGCGTGGGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: GGGYWSAVPAEPGKA*LCGSGKMSVFGVGK Trigger: CTTCCCCACGCCGAACACTGACATTTTCCCTGAGCCACAAAGCCAGGCCTTCCCGGGCTCGGCAGGGACAGCGCTCCAGTACCCGCCTCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS CCA 90 bp | GGCCCAGATCCCCCTGCTGCTGTGGAAACAGGTAGTCGGGGATCATaGGAACCTGGAAGCCACCCTTGGCGGCAGGGTAGGCAGGAGGCG | + |
|
Preference number: 5 (lower is better) Translates to: GPDPPAAVETGSRGS*EPGSHPWRQGRQEA Trigger: CGCCTCCTGCCTACCCTGCCGCCAAGGGTGGCTTCCAGGTTCCCATGATCCCCGACTACCTGTTTCCACAGCAGCAGGGGGATCTGGGCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS GCA 90 bp | GGAAAGGATCCGAACGGGTCAGAGATCTGCAGCGGGGACATCAGCTaGATCTCGGCCTTGGCCGCGGCCATCCTGGACGAGCAGGCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: GKDPNGSEICSGDIS*ISALAAAILDEQAG Trigger: TCCAGCCTGCTCGTCCAGGATGGCCGCGGCCAAGGCCGAGATGCAGCTGATGTCCCCGCTGCAGATCTCTGACCCGTTCGGATCCTTTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS GCA 90 bp | CAGTGTTCGGCGTGGGGAAGGTGGGTGCCGCTGAGTAAATGGGACTaGTGTCGTTGGATGGCACTGCGCAGCTCAGGGGTGGGCTCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: QCSAWGRWVPLSKWD*CRWMALRSSGVGSG Trigger: CCCAGAGCCCACCCCTGAGCTGCGCAGTGCCATCCAACGACAGCAGTCCCATTTACTCAGCGGCACCCACCTTCCCCACGCCGAACACTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS CCA 90 bp | GTACTGGAGCGCTGTCCCTGCCGAGCCCGGGAAGGCCTGGCTTTGTaGCTCAGGGAAAATGTCAGTGTTCGGCGTGGGGAAGGTGGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: VLERCPCRAREGLAL*LRENVSVRRGEGGC Trigger: GCACCCACCTTCCCCACGCCGAACACTGACATTTTCCCTGAGCCACAAAGCCAGGCCTTCCCGGGCTCGGCAGGGACAGCGCTCCAGTAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS CCA 90 bp | GTGGAAACAGGTAGTCGGGGATCATGGGAACCTGGAAGCCACCCTTaGCGGCAGGGTAGGCAGGAGGCGGGTACTGGAGCGCTGTCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: VETGSRGSWEPGSHP*RQGRQEAGTGALSL Trigger: CAGGGACAGCGCTCCAGTACCCGCCTCCTGCCTACCCTGCCGCCAAGGGTGGCTTCCAGGTTCCCATGATCCCCGACTACCTGTTTCCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS CCA 90 bp | AAATGTCAGTGTTCGGCGTGGGGAAGGTGGGTGCCGCTGAGTAAATaGGACTGCTGTCGTTGGATGGCACTGCGCAGCTCAGGGGTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: KCQCSAWGRWVPLSK*DCCRWMALRSSGVG Trigger: GCCCACCCCTGAGCTGCGCAGTGCCATCCAACGACAGCAGTCCCATTTACTCAGCGGCACCCACCTTCCCCACGCCGAACACTGACATTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS CCA 90 bp | GTGGCAAAGGCCTTAATAGTAGACAGAGGGGTTAGCGAAGGCTGCTaGGTGCGGCTCTCCAGGCCCTGGAAGGGCTTCTGGTCTGGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: VAKALIVDRGVSEGC*VRLSRPWKGFWSGV Trigger: CACCCCAGACCAGAAGCCCTTCCAGGGCCTGGAGAGCCGCACCCAGCAGCCTTCGCTAACCCCTCTGTCTACTATTAAGGCCTTTGCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS TCA 90 bp | CTCAGGGAAAATGTCAGTGTTCGGCGTGGGGAAGGTGGGTGCCGCTaGGTAAATGGGACTGCTGTCGTTGGATGGCACTGCGCAGCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: LRENVSVRRGEGGCR*VNGTAVVGWHCAAQ Trigger: CTGAGCTGCGCAGTGCCATCCAACGACAGCAGTCCCATTTACTCAGCGGCACCCACCTTCCCCACGCCGAACACTGACATTTTCCCTGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS CCA 90 bp | GGAAGGCCTGGCTTTGTGGCTCAGGGAAAATGTCAGTGTTCGGCGTaGGGAAGGTGGGTGCCGCTGAGTAAATGGGACTGCTGTCGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: GRPGFVAQGKCQCSA*GRWVPLSKWDCCRW Trigger: CCAACGACAGCAGTCCCATTTACTCAGCGGCACCCACCTTCCCCACGCCGAACACTGACATTTTCCCTGAGCCACAAAGCCAGGCCTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS CCA 90 bp | GGCTTTGTGGCTCAGGGAAAATGTCAGTGTTCGGCGTGGGGAAGGTaGGTGCCGCTGAGTAAATGGGACTGCTGTCGTTGGATGGCACTG | + |
|
Preference number: 5 (lower is better) Translates to: GFVAQGKCQCSAWGR*VPLSKWDCCRWMAL Trigger: CAGTGCCATCCAACGACAGCAGTCCCATTTACTCAGCGGCACCCACCTTCCCCACGCCGAACACTGACATTTTCCCTGAGCCACAAAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS-3UTR CAA 90 bp | GGAAGTGGGCAGAAAGGATTGTTGGCCAATAGACCTTCCACTCCAGTAGAGAGGGGCCGGTTGGGGTACTaGCGCATGCGGCTGGGTTTG | + |
|
Preference number: 5 (lower is better) Translates to: GSGQKGLLANRPSTPVERGRLGY*RMRLGL Trigger: CAAACCCAGCCGCATGCGCAAGTACCCCAACCGGCC...CCTCTCTACTGGAGTGGAAGGTCTATTGGCCAACAATCCTTTCTGCCCACTTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS-3UTR CAA 90 bp | ACAATTGCACATGTCAAGCCATCAGCAAGGCGCATCACACAAAAGGCACCAAGAAGCTGCATCTCGGCCTaGGCCGCGGCCATCCTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: TIAHVKPSARRITQKAPRSCISA*AAAILD Trigger: GTCCAGGATGGCCGCGGCCAAGGCCGAGATGCAGCT...TCTTGGTGCCTTTTGTGTGATGCGCCTTGCTGATGGCTTGACATGTGCAATTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS-3UTR CAA 90 bp | CAAGAGTACCCCAAGAAAAACGAAATCCATGGCACAGACACTGTACAAGGGTGCTCGGGCCACAAGGTGTaGCCACTGTTGGGTGCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: QEYPKKNEIHGTDTVQGCSGHKV*PLLGAG Trigger: GCCTGCACCCAACAGTGGCAACACCTTGTGGCCCGA...GCACCCTTGTACAGTGTCTGTGCCATGGATTTCGTTTTTCTTGGGGTACTCTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS-3UTR CAA 90 bp | CAAGAGTACCCCAAGAAAAACGAAATCCATGGCACAGACACTGTACAAGGGTGCGGGCAGTCGAGTGGTTaGGCTGGGGTAACTGGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: QEYPKKNEIHGTDTVQGCGQSSG*AGVTGL Trigger: GAGACCAGTTACCCCAGCCAAACCACTCGACTGCCC...GCACCCTTGTACAGTGTCTGTGCCATGGATTTCGTTTTTCTTGGGGTACTCTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS-3UTR CAA 90 bp | AGTACCCCAAGAAAAACGAAATCCATGGCACAGACACTGTACAAGGGTGCAGGGAAGGTGTTGCCACTGTaGGGTGCAGGCTCCAGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: STPRKTKSMAQTLYKGAGKVLPL*GAGSRE Trigger: TTCCCTGGAGCCTGCACCCAACAGTGGCAACACCTT...CCCTGCACCCTTGTACAGTGTCTGTGCCATGGATTTCGTTTTTCTTGGGGTACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS GCA 90 bp | GGAAGAGAGAGAGGAGGTGGCCGAAGAGGCCACAACACTTTTGTCTaGTTTCTTGTCCTTCTGCCGCAAGTGGATCTTGGTATGCCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: GRERGGGRRGHNTFV*FLVLLPQVDLGMPL Trigger: AAGAGGCATACCAAGATCCACTTGCGGCAGAAGGACAAGAAAGCAGACAAAAGTGTTGTGGCCTCTTCGGCCACCTCCTCTCTCTCTTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS-3UTR CAA 90 bp | AGCCATCAGCAAGGCGCATCACACAAAAGGCACCAAGACGTGAAACTTTTTAAAGAGGAGGCCGGTGGGTaGGTCATGCTCACTAGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SHQQGASHKRHQDVKLFKEEAGG*VMLTRP Trigger: TGGCCTAGTGAGCATGACCAACCCACCGGCCTCCTC...TTTAAAAAGTTTCACGTCTTGGTGCCTTTTGTGTGATGCGCCTTGCTGATGGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS CCA 90 bp | GAGGCCACAACACTTTTGTCTGCTTTCTTGTCCTTCTGCCGCAAGTaGATCTTGGTATGCCTCTTGCGTTCATCGCTCCTGGCAAACTTT | + |
|
Preference number: 5 (lower is better) Translates to: EATTLLSAFLSFCRK*ILVCLLRSSLLANF Trigger: AAAGTTTGCCAGGAGCGATGAACGCAAGAGGCATACCAAGATCCACTTGCGGCAGAAGGACAAGAAAGCAGACAAAAGTGTTGTGGCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS-3UTR CAA 90 bp | AAATCAAGTTCTTTGGATAGAGGTGAAGAACTTGGACATGGCTGTTTCAGGCAGATGGGACTGCTGTCGTaGGATGGCACTGCGCAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: KSSSLDRGEELGHGCFRQMGLLS*DGTAQL Trigger: GAGCTGCGCAGTGCCATCCAACGACAGCAGTCCCAT...CTGCCTGAAACAGCCATGTCCAAGTTCTTCACCTCTATCCAAAGAACTTGATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS-3UTR CAA 90 bp | ACTTGGACATGGCTGTTTCAGGCAGCTGAAGTCAAAGGGAATAGTAATTGGGGAGCCCTCTTCCTTATTTaGCTCCCAAAGCCTCCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: TWTWLFQAAEVKGNSNWGALFLI*LPKPPP Trigger: TGGGGGAGGCTTTGGGAGCAAAATAAGGAAGAGGGC...TCCCCAATTACTATTCCCTTTGACTTCAGCTGCCTGAAACAGCCATGTCCAAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS-3UTR CAA 90 bp | AAATCAAGTTCTTTGGATAGAGGTGAAGAACTTGGACATGGCTGTTTCAGGCAGCGGGAAGGCCTGGCTTaGTGGCTCAGGGAAAATGTC | + |
|
Preference number: 5 (lower is better) Translates to: KSSSLDRGEELGHGCFRQREGLA*WLRENV Trigger: GACATTTTCCCTGAGCCACAAAGCCAGGCCTTCCCG...CTGCCTGAAACAGCCATGTCCAAGTTCTTCACCTCTATCCAAAGAACTTGATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS-3UTR CAA 90 bp | CAAGAGTACCCCAAGAAAAACGAAATCCATGGCACAGACACTGTACAAGGGTGCGGGCAGAAAGGATTGTaGGCCAATAGACCTTCCACT | + |
|
Preference number: 5 (lower is better) Translates to: QEYPKKNEIHGTDTVQGCGQKGL*ANRPST Trigger: AGTGGAAGGTCTATTGGCCAACAATCCTTTCTGCCC...GCACCCTTGTACAGTGTCTGTGCCATGGATTTCGTTTTTCTTGGGGTACTCTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS-3UTR CAA 90 bp | GATTTTCTAGCATTGAAGGGAGCAAGGGGTCAGGCATATGATGGAGATGATACTTGCCGCAAGTGGATCTaGGTATGCCTCTTGCGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: DFLALKGARGQAYDGDDTCRKWI*VCLLRS Trigger: TGAACGCAAGAGGCATACCAAGATCCACTTGCGGCA...AGTATCATCTCCATCATATGCCTGACCCCTTGCTCCCTTCAATGCTAGAAAATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS-3UTR CAA 90 bp | GAACTTGGACATGGCTGTTTCAGGCAGCTGAAGTCAAAGGGAATAGTAATTGGGCTTTTGTCTGCTTTCTaGTCCTTCTGCCGCAAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: ELGHGCFRQLKSKGIVIGLLSAF*SFCRKW Trigger: CCACTTGCGGCAGAAGGACAAGAAAGCAGACAAAAG...CCCAATTACTATTCCCTTTGACTTCAGCTGCCTGAAACAGCCATGTCCAAGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS-3UTR CAA 90 bp | GATTTTCTAGCATTGAAGGGAGCAAGGGGTCAGGCATATGATGGAGATGATACTTCCTGGGAGAAAAGGTaGCTGTCATGTCCGAAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: DFLALKGARGQAYDGDDTSWEKR*LSCPKA Trigger: GGCTTTCGGACATGACAGCAACCTTTTCTCCCAGGA...AGTATCATCTCCATCATATGCCTGACCCCTTGCTCCCTTCAATGCTAGAAAATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS-3UTR CAA 90 bp | CTTATTGTCACAGCATCATCACAAAATAGAGGATCACCATTGGTTTGCTTGGCTGTAGAGAGGGAGGACTaGGCTCTGAGAACCTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: LIVTASSQNRGSPLVCLAVERED*ALRTSI Trigger: GATGGAGGTTCTCAGAGCCAAGTCCTCCCTCTCTAC...AGCCAAGCAAACCAATGGTGATCCTCTATTTTGTGATGATGCTGTGACAATAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS-3UTR CAA 90 bp | GATTTTCTAGCATTGAAGGGAGCAAGGGGTCAGGCATATGATGGAGATGATACTGGCCCAAACCCCATTTaGCCAACTCGATTTTCTAGC | + |
|
Preference number: 5 (lower is better) Translates to: DFLALKGARGQAYDGDDTGPNPI*PTRFSS Trigger: GCTAGAAAATCGAGTTGGCAAAATGGGGTTTGGGCC...AGTATCATCTCCATCATATGCCTGACCCCTTGCTCCCTTCAATGCTAGAAAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS-3UTR CAA 90 bp | CCACATATCCCATGGGCAATAAAGCGCATTCAATGTGTTTATAAGCCAAACAGTATCTTGGTATGCCTCTaGCGTTCATCGCTCCTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: PHIPWAIKRIQCVYKPNSILVCL*RSSLLA Trigger: TGCCAGGAGCGATGAACGCAAGAGGCATACCAAGAT...ACTGTTTGGCTTATAAACACATTGAATGCGCTTTATTGCCCATGGGATATGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS-3UTR CAA 90 bp | GGAAGTGGGCAGAAAGGATTGTTGGCCAATAGACCTTCCACTCCAGTAGAGAGGTGCAAATCAAGTTCTTaGGATAGAGGTGAAGAACTT | + |
|
Preference number: 5 (lower is better) Translates to: GSGQKGLLANRPSTPVERCKSSS*DRGEEL Trigger: AAGTTCTTCACCTCTATCCAAAGAACTTGATTTGCA...CCTCTCTACTGGAGTGGAAGGTCTATTGGCCAACAATCCTTTCTGCCCACTTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS-3UTR CAA 90 bp | AAATCAAGTTCTTTGGATAGAGGTGAAGAACTTGGACATGGCTGTTTCAGGCAGCTCGATTTTCTAGCATaGAAGGGAGCAAGGGGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: KSSSLDRGEELGHGCFRQLDFLA*KGARGQ Trigger: CTGACCCCTTGCTCCCTTCAATGCTAGAAAATCGAG...CTGCCTGAAACAGCCATGTCCAAGTTCTTCACCTCTATCCAAAGAACTTGATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS-3UTR CAA 90 bp | TCCCTCACAATTGCACATGTCAAGCCATCAGCAAGGCGCATCACACAAAAGGCAAGCCAAACAGTCACTTaGTTTAAGCAAACACAAGTA | + |
|
Preference number: 5 (lower is better) Translates to: SLTIAHVKPSARRITQKASQTVT*FKQTQV Trigger: TACTTGTGTTTGCTTAAACAAAGTGACTGTTTGGCT...TGCCTTTTGTGTGATGCGCCTTGCTGATGGCTTGACATGTGCAATTGTGAGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS-3UTR CAA 90 bp | CTTATTGTCACAGCATCATCACAAAATAGAGGATCACCATTGGTTTGCTTGGCTAATAGAGGATCACCATaGGTTTGCTTGGCTTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LIVTASSQNRGSPLVCLANRGSP*VCLAFL Trigger: AAGAAAAGCCAAGCAAACCAATGGTGATCCTCTATT...AGCCAAGCAAACCAATGGTGATCCTCTATTTTGTGATGATGCTGTGACAATAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS CCA 72 bp | GGTCCTGCGGCGGCGGAAGCTGGCTGCGGCGGCGGATaGCGGCGGCGGCTCCCCAAGTTCTGCGCGCTGGGA | + |
|
Preference number: 6 (lower is better) Translates to: GPAAAEAGCGGG*RRRLPKFCALG Trigger: TCCCAGCGCGCAGAACTTGGGGAGCCGCCGCCGCCATCCGCCGCCGCAGCCAGCTTCCGCCGCCGCAGGACC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS CCA 72 bp | ACATCAGCTGCATCTCGGCCTTGGCCGCGGCCATCCTaGACGAGCAGGCTGGAGAGCTGGTGTCGGGGCGGG | + |
|
Preference number: 6 (lower is better) Translates to: TSAASRPWPRPS*TSRLESWCRGG Trigger: CCCGCCCCGACACCAGCTCTCCAGCCTGCTCGTCCAGGATGGCCGCGGCCAAGGCCGAGATGCAGCTGATGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS TCA 72 bp | GCTCGTAGGGCTGCTCGCCCGTGTCCGCCTGAGGGTTaGAGGTGCTGCTGCTGCTGCTGCTGTTGCTGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: ARRAARPCPPEG*RCCCCCCCCCR Trigger: GCGGCAGCAACAGCAGCAGCAGCAGCAGCACCTTCAACCCTCAGGCGGACACGGGCGAGCAGCCCTACGAGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS CCA 72 bp | AGATCTGCAGCGGGGACATCAGCTGCATCTCGGCCTTaGCCGCGGCCATCCTGGACGAGCAGGCTGGAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: RSAAGTSAASRP*PRPSWTSRLES Trigger: GCTCTCCAGCCTGCTCGTCCAGGATGGCCGCGGCCAAGGCCGAGATGCAGCTGATGTCCCCGCTGCAGATCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS CAA 72 bp | GAGATCTGCAGCGGGGACATCAGCTGCATCTCGGCCTaGGCCGCGGCCATCCTGGACGAGCAGGCTGGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: EICSGDISCISA*AAAILDEQAGE Trigger: CTCTCCAGCCTGCTCGTCCAGGATGGCCGCGGCCAAGGCCGAGATGCAGCTGATGTCCCCGCTGCAGATCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS CAA 90 bp | AACGGGTCAGAGATCTGCAGCGGGGACATCAGCTGCATCTCGGCCTaGGCCGCGGCCATCCTGGACGAGCAGGCTGGAGAGCTGGTGTCG | + |
|
Preference number: 6 (lower is better) Translates to: NGSEICSGDISCISA*AAAILDEQAGELVS Trigger: CGACACCAGCTCTCCAGCCTGCTCGTCCAGGATGGCCGCGGCCAAGGCCGAGATGCAGCTGATGTCCCCGCTGCAGATCTCTGACCCGTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS CAA 90 bp | CGGGTACTGGAGCGCTGTCCCTGCCGAGCCCGGGAAGGCCTGGCTTaGTGGCTCAGGGAAAATGTCAGTGTTCGGCGTGGGGAAGGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: RVLERCPCRAREGLA*WLRENVSVRRGEGG Trigger: CCCACCTTCCCCACGCCGAACACTGACATTTTCCCTGAGCCACAAAGCCAGGCCTTCCCGGGCTCGGCAGGGACAGCGCTCCAGTACCCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS CAA 90 bp | GAGGAGGCCGCTGGAGATGGTGCTGAGGACGAGGAGGCCGGTGGGTaGGTCATGCTCACTAGGCCACTGACCAAGCTGAAGAGGGGCTCG | + |
|
Preference number: 6 (lower is better) Translates to: EEAAGDGAEDEEAGG*VMLTRPLTKLKRGS Trigger: CGAGCCCCTCTTCAGCTTGGTCAGTGGCCTAGTGAGCATGACCAACCCACCGGCCTCCTCGTCCTCAGCACCATCTCCAGCGGCCTCCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS GCA 72 bp | GCGTGGGGAAGGTGGGTGCCGCTGAGTAAATGGGACTaGTGTCGTTGGATGGCACTGCGCAGCTCAGGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: AWGRWVPLSKWD*CRWMALRSSGV Trigger: CACCCCTGAGCTGCGCAGTGCCATCCAACGACAGCAGTCCCATTTACTCAGCGGCACCCACCTTCCCCACGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS CCA 72 bp | AGGTGGGTGCCGCTGAGTAAATGGGACTGCTGTCGTTaGATGGCACTGCGCAGCTCAGGGGTGGGCTCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: RWVPLSKWDCCR*MALRSSGVGSG Trigger: CCCAGAGCCCACCCCTGAGCTGCGCAGTGCCATCCAACGACAGCAGTCCCATTTACTCAGCGGCACCCACCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS CCA 72 bp | CGCTGTCCCTGCCGAGCCCGGGAAGGCCTGGCTTTGTaGCTCAGGGAAAATGTCAGTGTTCGGCGTGGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: RCPCRAREGLAL*LRENVSVRRGE Trigger: TTCCCCACGCCGAACACTGACATTTTCCCTGAGCCACAAAGCCAGGCCTTCCCGGGCTCGGCAGGGACAGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS CCA 72 bp | CCCCCTGCTGCTGTGGAAACAGGTAGTCGGGGATCATaGGAACCTGGAAGCCACCCTTGGCGGCAGGGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: PPAAVETGSRGS*EPGSHPWRQGR Trigger: CCTACCCTGCCGCCAAGGGTGGCTTCCAGGTTCCCATGATCCCCGACTACCTGTTTCCACAGCAGCAGGGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS CCA 72 bp | TACTGGAGCGCTGTCCCTGCCGAGCCCGGGAAGGCCTaGCTTTGTGGCTCAGGGAAAATGTCAGTGTTCGGC | + |
|
Preference number: 6 (lower is better) Translates to: YWSAVPAEPGKA*LCGSGKMSVFG Trigger: GCCGAACACTGACATTTTCCCTGAGCCACAAAGCCAGGCCTTCCCGGGCTCGGCAGGGACAGCGCTCCAGTA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS CCA 72 bp | TGTTCGGCGTGGGGAAGGTGGGTGCCGCTGAGTAAATaGGACTGCTGTCGTTGGATGGCACTGCGCAGCTCA | + |
|
Preference number: 6 (lower is better) Translates to: CSAWGRWVPLSK*DCCRWMALRSS Trigger: TGAGCTGCGCAGTGCCATCCAACGACAGCAGTCCCATTTACTCAGCGGCACCCACCTTCCCCACGCCGAACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS GCA 72 bp | AAGGCCTTAATAGTAGACAGAGGGGTTAGCGAAGGCTaGTGGGTGCGGCTCTCCAGGCCCTGGAAGGGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: KALIVDRGVSEG*WVRLSRPWKGF Trigger: GAAGCCCTTCCAGGGCCTGGAGAGCCGCACCCAGCAGCCTTCGCTAACCCCTCTGTCTACTATTAAGGCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS TCA 72 bp | AATGTCAGTGTTCGGCGTGGGGAAGGTGGGTGCCGCTaGGTAAATGGGACTGCTGTCGTTGGATGGCACTGC | + |
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Preference number: 6 (lower is better) Translates to: NVSVRRGEGGCR*VNGTAVVGWHC Trigger: GCAGTGCCATCCAACGACAGCAGTCCCATTTACTCAGCGGCACCCACCTTCCCCACGCCGAACACTGACATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS CCA 72 bp | GCTCAGGGAAAATGTCAGTGTTCGGCGTGGGGAAGGTaGGTGCCGCTGAGTAAATGGGACTGCTGTCGTTGG | + |
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Preference number: 6 (lower is better) Translates to: AQGKCQCSAWGR*VPLSKWDCCRW Trigger: CCAACGACAGCAGTCCCATTTACTCAGCGGCACCCACCTTCCCCACGCCGAACACTGACATTTTCCCTGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS CCA 72 bp | GGCTTTGTGGCTCAGGGAAAATGTCAGTGTTCGGCGTaGGGAAGGTGGGTGCCGCTGAGTAAATGGGACTGC | + |
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Preference number: 6 (lower is better) Translates to: GFVAQGKCQCSA*GRWVPLSKWDC Trigger: GCAGTCCCATTTACTCAGCGGCACCCACCTTCCCCACGCCGAACACTGACATTTTCCCTGAGCCACAAAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS TCA 72 bp | CTGGTATTGAGGGCCTTCAGGTCCTGGGAGCCCGACTaGGTGGCAAAGGCCTTAATAGTAGACAGAGGGGTT | + |
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Preference number: 6 (lower is better) Translates to: LVLRAFRSWEPD*VAKALIVDRGV Trigger: AACCCCTCTGTCTACTATTAAGGCCTTTGCCACTCAGTCGGGCTCCCAGGACCTGAAGGCCCTCAATACCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS CAA 90 bp | AGAGAGGAGGTGGCCGAAGAGGCCACAACACTTTTGTCTGCTTTCTaGTCCTTCTGCCGCAAGTGGATCTTGGTATGCCTCTTGCGTTCA | + |
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Preference number: 6 (lower is better) Translates to: REEVAEEATTLLSAF*SFCRKWILVCLLRS Trigger: TGAACGCAAGAGGCATACCAAGATCCACTTGCGGCAGAAGGACAAGAAAGCAGACAAAAGTGTTGTGGCCTCTTCGGCCACCTCCTCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS CCA 72 bp | TGTCTGCTTTCTTGTCCTTCTGCCGCAAGTGGATCTTaGTATGCCTCTTGCGTTCATCGCTCCTGGCAAACT | + |
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Preference number: 6 (lower is better) Translates to: CLLSCPSAASGS*YASCVHRSWQT Trigger: AGTTTGCCAGGAGCGATGAACGCAAGAGGCATACCAAGATCCACTTGCGGCAGAAGGACAAGAAAGCAGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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| CDS CCA 72 bp | ACACTTTTGTCTGCTTTCTTGTCCTTCTGCCGCAAGTaGATCTTGGTATGCCTCTTGCGTTCATCGCTCCTG | + |
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Preference number: 6 (lower is better) Translates to: TLLSAFLSFCRK*ILVCLLRSSLL Trigger: CAGGAGCGATGAACGCAAGAGGCATACCAAGATCCACTTGCGGCAGAAGGACAAGAAAGCAGACAAAAGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000239938.5 |
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