RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EGLN3 (Homo sapiens)

Ensembl gene IDs: ENSG00000129521

Ensembl transcript IDs: ENST00000250457.9, ENST00000464521.6, ENST00000487915.6, ENST00000546681.5, ENST00000547327.2, ENST00000548285.5, ENST00000550114.5, ENST00000551935.5, ENST00000553215.5, ENST00000556785.1, ENST00000557521.1

Found 255 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGGCCTCTTGGCTTGGAAGTTGTACGGCAAACTGTGACTCCCCACTaGACTCATCCACCTCCACCCCTTCACTCCCACACGTTTCCAATC +
Preference number: 1 (lower is better)
Translates to: WPLGLEVVRQTVTPH*THPPPPLHSHTFPI
Trigger: GATTGGAAACGTGTGGGAGTGAAGGGGTGGAGGTGGATGAGTGCAGTGGGGAGTCACAGTTTGCCGTACAACTTCCAAGCCAAGAGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547327.2
3UTR CCA 90 bp GTGGTGCAGGGCTCAGCATCAGGAGAGAATTTTCAGTCAAGAAGATaGTCTAACAATGTGCTGGGTCCCAGGGGGCAGAAGCAGCATTCA +
Preference number: 1 (lower is better)
Translates to: VVQGSASGENFQSRR*SNNVLGPRGQKQHS
Trigger: TGAATGCTGCTTCTGCCCCCTGGGACCCAGCACATTGTTAGACCATCTTCTTGACTGAAAATTCTCTCCTGATGCTGAGCCCTGCACCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547327.2
3UTR GCA 90 bp CAGCATCAGGAGAGAATTTTCAGTCAAGAAGATGGTCTAACAATGTaGTGGGTCCCAGGGGGCAGAAGCAGCATTCAGAAGTGGAGTTTT +
Preference number: 1 (lower is better)
Translates to: QHQERIFSQEDGLTM*WVPGGRSSIQKWSF
Trigger: AAAACTCCACTTCTGAATGCTGCTTCTGCCCCCTGGGACCCAGCACATTGTTAGACCATCTTCTTGACTGAAAATTCTCTCCTGATGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547327.2
3UTR TCA 90 bp GAATTGCCACTGGAAAACTGGCTCAACTATCATTTGAGGAAAGACTaGGAAAGCCTATCCCAAAGTAATGGACATGCACCAACATCGCGG +
Preference number: 1 (lower is better)
Translates to: ELPLENWLNYHLRKD*ESLSQSNGHAPTSR
Trigger: CCGCGATGTTGGTGCATGTCCATTACTTTGGGATAGGCTTTCTCAGTCTTTCCTCAAATGATAGTTGAGCCAGTTTTCCAGTGGCAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547327.2
3UTR TCA 90 bp ATATTCCAATCGAAAGGTGATTTATCTAAAGGGCAGGGAGCTTTGTaGCAAACCAGCCAAAGTAAACCTGGAAATCTGGGGGTGGGACAG +
Preference number: 1 (lower is better)
Translates to: IFQSKGDLSKGQGAL*QTSQSKPGNLGVGQ
Trigger: CTGTCCCACCCCCAGATTTCCAGGTTTACTTTGGCTGGTTTGTCACAAAGCTCCCTGCCCTTTAGATAAATCACCTTTCGATTGGAATAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547327.2
3UTR CCA 90 bp GGTGCATTAATAACGATGCTTTCAGATATTCTATTCATGGCCTCTTaGCTTGGAAGTTGTACGGCAAACTGTGACTCCCCACTGCACTCA +
Preference number: 1 (lower is better)
Translates to: GALITMLSDILFMAS*LGSCTANCDSPLHS
Trigger: TGAGTGCAGTGGGGAGTCACAGTTTGCCGTACAACTTCCAAGCCAAGAGGCCATGAATAGAATATCTGAAAGCATCGTTATTAATGCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547327.2
3UTR TCA 90 bp CAAGTCACTCAGAATTGCCACTGGAAAACTGGCTCAACTATCATTTaGGGAAAGACTGAGAAAGCCTATCCCAAAGTAATGGACATGCAC +
Preference number: 1 (lower is better)
Translates to: QVTQNCHWKTGSTII*GKTEKAYPKVMDMH
Trigger: GTGCATGTCCATTACTTTGGGATAGGCTTTCTCAGTCTTTCCTCAAATGATAGTTGAGCCAGTTTTCCAGTGGCAATTCTGAGTGACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547327.2
3UTR TCA 90 bp ACAGCAAGGTCATTTAATGCAAAAATCAAACTAGTCAAAGACGAGTaGCTAATCCACCACCAACATGATGGAAGAAGAATAAAGAAACAC +
Preference number: 1 (lower is better)
Translates to: TARSFNAKIKLVKDE*LIHHQHDGRRIKKH
Trigger: GTGTTTCTTTATTCTTCTTCCATCATGTTGGTGGTGGATTAGTCACTCGTCTTTGACTAGTTTGATTTTTGCATTAAATGACCTTGCTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547327.2
3UTR-3UTR TCA 90 bp TGGCTTGGAAGTTGTACGGCAAACTGTGACTCCCCACTGCACTCATCCACCTCCCTTTCTGGAGGTGCTTaGCTACTCTCTCGTGAGCAC +
Preference number: 2 (lower is better)
Translates to: WLGSCTANCDSPLHSSTSLSGGA*LLSREH
Trigger: GTGCTCACGAGAGAGTAGTCAAGCACCTCCAGAAAG...GGAGGTGGATGAGTGCAGTGGGGAGTCACAGTTTGCCGTACAACTTCCAAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547327.2
3UTR-3UTR TCA 90 bp TGGCTTGGAAGTTGTACGGCAAACTGTGACTCCCCACTGCACTCATCCACCTCCGTTCTGAACGTCCCTTaGCCACACCATAAGACAAGC +
Preference number: 2 (lower is better)
Translates to: WLGSCTANCDSPLHSSTSVLNVP*PHHKTS
Trigger: GCTTGTCTTATGGTGTGGTCAAGGGACGTTCAGAAC...GGAGGTGGATGAGTGCAGTGGGGAGTCACAGTTTGCCGTACAACTTCCAAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547327.2
3UTR-3UTR CCA 90 bp TGGCTTGGAAGTTGTACGGCAAACTGTGACTCCCCACTGCACTCATCCACCTCCAACCCGGTTTCTTTCTaGAGGTGCTTGACTACTCTC +
Preference number: 2 (lower is better)
Translates to: WLGSCTANCDSPLHSSTSNPVSF*RCLTTL
Trigger: GAGAGTAGTCAAGCACCTCCAGAAAGAAACCGGGTT...GGAGGTGGATGAGTGCAGTGGGGAGTCACAGTTTGCCGTACAACTTCCAAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547327.2
3UTR-3UTR GCA 90 bp CCCAAAGTAATGGACATGCACCAACATCGCGGTACCTACATGTTCCCGTTTTTCAAAGGAAGGTGGTGGTaGAGGGCTCAGCATCAGGAG +
Preference number: 2 (lower is better)
Translates to: PKVMDMHQHRGTYMFPFFKGRWW*RAQHQE
Trigger: CTCCTGATGCTGAGCCCTGCACCACCACCTTCCTTT...GAAAAACGGGAACATGTAGGTACCGCGATGTTGGTGCATGTCCATTACTTTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547327.2
3UTR-3UTR TCA 90 bp GTGCGATCTGTGCTTACTGCAGGAGTAGAAGCTTCCACAGTTCTAGCAAATTCCGAGAGCCAAGTGAGCTaGAGAAAGACTGCTAGGGAC +
Preference number: 2 (lower is better)
Translates to: VRSVLTAGVEASTVLANSESQVS*RKTARD
Trigger: GTCCCTAGCAGTCTTTCTTCAGCTCACTTGGCTCTC...GGAATTTGCTAGAACTGTGGAAGCTTCTACTCCTGCAGTAAGCACAGATCGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250457.9
3UTR-3UTR GCA 90 bp AACGATGCTTTCAGATATTCTATTCATGGCCTCTTGGCTTGGAAGTTGTACGGCGATGGTCTAACAATGTaGTGGGTCCCAGGGGGCAGA +
Preference number: 2 (lower is better)
Translates to: NDAFRYSIHGLLAWKLYGDGLTM*WVPGGR
Trigger: TCTGCCCCCTGGGACCCAGCACATTGTTAGACCATC...GCCGTACAACTTCCAAGCCAAGAGGCCATGAATAGAATATCTGAAAGCATCGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547327.2
3UTR-3UTR CCA 90 bp TCAGGAGAGAATTTTCAGTCAAGAAGATGGTCTAACAATGTGCTGGGTCCCAGGCAGCCACAGCTTGTCTaGCTTTTGTCACCCACAAGA +
Preference number: 2 (lower is better)
Translates to: SGENFQSRRWSNNVLGPRQPQLV*LLSPTR
Trigger: TCTTGTGGGTGACAAAAGCCAGACAAGCTGTGGCTG...CCTGGGACCCAGCACATTGTTAGACCATCTTCTTGACTGAAAATTCTCTCCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547327.2
3UTR-3UTR GCA 90 bp CCCTCTCATGCCGGTATACTCTGCTTCGCTGTTTCAGTAAAAGTTTTCCGTAGTCAGGGAGTCACTTCCTaGTATGTGAACAAAAACCCG +
Preference number: 2 (lower is better)
Translates to: PSHAGILCFAVSVKVFRSQGVTS*YVNKNP
Trigger: CGGGTTTTTGTTCACATAGCAGGAAGTGACTCCCTG...ACTACGGAAAACTTTTACTGAAACAGCGAAGCAGAGTATACCGGCATGAGAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000547327.2
3UTR-3UTR CCA 90 bp AACGATGCTTTCAGATATTCTATTCATGGCCTCTTGGCTTGGAAGTTGTACGGCTTAGGAAAAGGAAGGTaGTGGTGCAGGGCTCAGCAT +
Preference number: 2 (lower is better)
Translates to: NDAFRYSIHGLLAWKLYGLGKGR*WCRAQH
Trigger: ATGCTGAGCCCTGCACCACCACCTTCCTTTTCCTAA...GCCGTACAACTTCCAAGCCAAGAGGCCATGAATAGAATATCTGAAAGCATCGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547327.2
3UTR CAA 90 bp GAACCTCGTCTTAAAATCGGACCACAGCCACAGCTTGTCTGGCTTTaGTCACCCACAAGAGCCAATATTTCAAAGTCAACAGAAGGTCAT +
Preference number: 2 (lower is better)
Translates to: EPRLKIGPQPQLVWL*SPTRANISKSTEGH
Trigger: ATGACCTTCTGTTGACTTTGAAATATTGGCTCTTGTGGGTGACAAAAGCCAGACAAGCTGTGGCTGTGGTCCGATTTTAAGACGAGGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547327.2
3UTR-3UTR TCA 90 bp CCTTCACTCCCACACGTTTCCAATCCTCACCACTTAGCCTTTATTCAGAGTGTTGGCTCAACTATCATTTaGGGAAAGACTGAGAAAGCC +
Preference number: 2 (lower is better)
Translates to: PSLPHVSNPHHLAFIQSVGSTII*GKTEKA
Trigger: GGCTTTCTCAGTCTTTCCTCAAATGATAGTTGAGCC...AACACTCTGAATAAAGGCTAAGTGGTGAGGATTGGAAACGTGTGGGAGTGAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547327.2
3UTR CAA 90 bp TGGATCTTTGAGAACCTCGTCTTAAAATCGGACCACAGCCACAGCTaGTCTGGCTTTTGTCACCCACAAGAGCCAATATTTCAAAGTCAA +
Preference number: 2 (lower is better)
Translates to: WIFENLVLKSDHSHS*SGFCHPQEPIFQSQ
Trigger: TTGACTTTGAAATATTGGCTCTTGTGGGTGACAAAAGCCAGACAAGCTGTGGCTGTGGTCCGATTTTAAGACGAGGTTCTCAAAGATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547327.2
3UTR-3UTR TCA 90 bp TTCCTGCTATGTGAACAAAAACCCGGTTTCTTTCTGGAGGTGCTTGACTACTCTAGGCATTTAAGATCATaGGGACACGTGTGTCTCAGA +
Preference number: 2 (lower is better)
Translates to: FLLCEQKPGFFLEVLDYSRHLRS*GHVCLR
Trigger: TCTGAGACACACGTGTCCTCATGATCTTAAATGCCT...AGAGTAGTCAAGCACCTCCAGAAAGAAACCGGGTTTTTGTTCACATAGCAGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547327.2
3UTR-3UTR TCA 90 bp CCTTCACTCCCACACGTTTCCAATCCTCACCACTTAGCCTTTATTCAGAGTGTTTCACTTCCTGCTATGTaGACAAAAACCCGGTTTCTT +
Preference number: 2 (lower is better)
Translates to: PSLPHVSNPHHLAFIQSVSLPAM*TKTRFL
Trigger: AAGAAACCGGGTTTTTGTTCACATAGCAGGAAGTGA...AACACTCTGAATAAAGGCTAAGTGGTGAGGATTGGAAACGTGTGGGAGTGAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547327.2
3UTR-3UTR GCA 90 bp CCTTCACTCCCACACGTTTCCAATCCTCACCACTTAGCCTTTATTCAGAGTGTTATGTTCCCGTTTTTCTaGCAATCTACCTGTGTTTCC +
Preference number: 2 (lower is better)
Translates to: PSLPHVSNPHHLAFIQSVMFPFF*QSTCVS
Trigger: GGAAACACAGGTAGATTGGCAGAAAAACGGGAACAT...AACACTCTGAATAAAGGCTAAGTGGTGAGGATTGGAAACGTGTGGGAGTGAAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547327.2
3UTR-3UTR TCA 90 bp TCCAATCCTCACCACTTAGCCTTTATTCAGAGTGTTCCTCTCAGCGTATTAGAGCACGTGTGTCTCAGATaGTACACAGTGTTTCCAATA +
Preference number: 2 (lower is better)
Translates to: SNPHHLAFIQSVPLSVLEHVCLR*YTVFPI
Trigger: TATTGGAAACACTGTGTATCATCTGAGACACACGTG...CTCTAATACGCTGAGAGGAACACTCTGAATAAAGGCTAAGTGGTGAGGATTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547327.2
3UTR-3UTR TCA 90 bp AACGATGCTTTCAGATATTCTATTCATGGCCTCTTGGCTTGGAAGTTGTACGGCCATTTGAGGAAAGACTaGGAAAGCCTATCCCAAAGT +
Preference number: 2 (lower is better)
Translates to: NDAFRYSIHGLLAWKLYGHLRKD*ESLSQS
Trigger: ACTTTGGGATAGGCTTTCTCAGTCTTTCCTCAAATG...GCCGTACAACTTCCAAGCCAAGAGGCCATGAATAGAATATCTGAAAGCATCGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547327.2
3UTR-3UTR CCA 90 bp CCTTCACTCCCACACGTTTCCAATCCTCACCACTTAGCCTTTATTCAGAGTGTTTTTCAGTCAAGAAGATaGTCTAACAATGTGCTGGGT +
Preference number: 2 (lower is better)
Translates to: PSLPHVSNPHHLAFIQSVFQSRR*SNNVLG
Trigger: ACCCAGCACATTGTTAGACCATCTTCTTGACTGAAA...AACACTCTGAATAAAGGCTAAGTGGTGAGGATTGGAAACGTGTGGGAGTGAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547327.2
3UTR-3UTR TCA 90 bp TTACTTTACTTGGGTGCATTAATAACGATGCTTTCAGATATTCTATTCATGGCCTTGTACGGCAAACTGTaGCTCCCCACTGCACTCATC +
Preference number: 2 (lower is better)
Translates to: LLYLGALITMLSDILFMALYGKL*LPTALI
Trigger: GATGAGTGCAGTGGGGAGTCACAGTTTGCCGTACAA...GGCCATGAATAGAATATCTGAAAGCATCGTTATTAATGCACCCAAGTAAAGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547327.2
3UTR-3UTR GCA 90 bp CCTTCACTCCCACACGTTTCCAATCCTCACCACTTAGCCTTTATTCAGAGTGTTCTCCAGAATTCTGAGTaGTTTTGTAGAAATCTCTTC +
Preference number: 2 (lower is better)
Translates to: PSLPHVSNPHHLAFIQSVLQNSE*FCRNLF
Trigger: GAAGAGATTTCTACAAAAGCACTCAGAATTCTGGAG...AACACTCTGAATAAAGGCTAAGTGGTGAGGATTGGAAACGTGTGGGAGTGAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547327.2
3UTR-3UTR TCA 90 bp TTCCAATCCTCACCACTTAGCCTTTATTCAGAGTGTTCCTCTCAGCGTATTAGACTTAACTGGTTGTTTTaGGTGGACTTTGCCATCAAT +
Preference number: 2 (lower is better)
Translates to: FQSSPLSLYSECSSQRIRLNWLF*VDFAIN
Trigger: ATTGATGGCAAAGTCCACTCAAAACAACCAGTTAAG...TCTAATACGCTGAGAGGAACACTCTGAATAAAGGCTAAGTGGTGAGGATTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547327.2
3UTR-3UTR TCA 90 bp GCTCAAGCCTGGTTTGCATTTGGTTCTAATTGGCCAGGGAATATTCCAATCGAAAATCCACCACCAACATaGTGGAAGAAGAATAAAGAA +
Preference number: 2 (lower is better)
Translates to: AQAWFAFGSNWPGNIPIENPPPT*WKKNKE
Trigger: TTCTTTATTCTTCTTCCATCATGTTGGTGGTGGATT...TTCGATTGGAATATTCCCTGGCCAATTAGAACCAAATGCAAACCAGGCTTGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547327.2
3UTR-3UTR GCA 90 bp TTAATCCTGACCTCCCTCAGAGCAAATTCTGCTCCTAGAATGATGAAGAAAAACCATGCCGGTATACTCTaGTTCGCTGTTTCAGTAAAA +
Preference number: 2 (lower is better)
Translates to: LILTSLRANSAPRMMKKNHAGIL*FAVSVK
Trigger: TTTTACTGAAACAGCGAAGCAGAGTATACCGGCATG...GTTTTTCTTCATCATTCTAGGAGCAGAATTTGCTCTGAGGGAGGTCAGGATTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547327.2
3UTR-3UTR CCA 90 bp AATATACAAAATTCCTGTCTTCATTGTGCTTACACTCCAGAGAAAGGATACAAGCGTGATGCCTCTCTGTaGCATCTACCACCTCCATTT +
Preference number: 2 (lower is better)
Translates to: NIQNSCLHCAYTPEKGYKRDASL*HLPPPF
Trigger: AAATGGAGGTGGTAGATGCCACAGAGAGGCATCACG...CTTGTATCCTTTCTCTGGAGTGTAAGCACAATGAAGACAGGAATTTTGTATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250457.9
3UTR-3UTR CCA 90 bp AAACCAGCCAAAGTAAACCTGGAAATCTGGGGGTGGGACAGGATAAATTTTATTTTGCCACTGGAAAACTaGCTCAACTATCATTTGAGG +
Preference number: 2 (lower is better)
Translates to: KPAKVNLEIWGWDRINFILPLEN*LNYHLR
Trigger: CCTCAAATGATAGTTGAGCCAGTTTTCCAGTGGCAA...AATAAAATTTATCCTGTCCCACCCCCAGATTTCCAGGTTTACTTTGGCTGGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000547327.2
3UTR-3UTR TCA 90 bp TGTTTATTGTATATCAGTAGACCTAGCTCTTTCCACAGTTATCAGTGGTTAACACACAAGACAGGGATGTaGAGGATGCAAGAAGTAGCA +
Preference number: 2 (lower is better)
Translates to: CLLYISRPSSFHSYQWLTHKTGM*RMQEVA
Trigger: TGCTACTTCTTGCATCCTTCACATCCCTGTCTTGTG...TGTTAACCACTGATAACTGTGGAAAGAGCTAGGTCTACTGATATACAATAAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250457.9
3UTR-3UTR CCA 90 bp AATATACAAAATTCCTGTCTTCATTGTGCTTACACTCCAGAGAAAGGATACAAGGGAGTGTCTGCCCCATaGGACACTTATAAATTGTTC +
Preference number: 2 (lower is better)
Translates to: NIQNSCLHCAYTPEKGYKGVSAP*DTYKLF
Trigger: GAACAATTTATAAGTGTCCCATGGGGCAGACACTCC...CTTGTATCCTTTCTCTGGAGTGTAAGCACAATGAAGACAGGAATTTTGTATATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000250457.9
3UTR-3UTR GCA 90 bp TTACTTTACTTGGGTGCATTAATAACGATGCTTTCAGATATTCTATTCATGGCCACTCCACAAACCAACTaGCACATGGCAAAATCACAA +
Preference number: 2 (lower is better)
Translates to: LLYLGALITMLSDILFMATPQTN*HMAKSQ
Trigger: TTGTGATTTTGCCATGTGGCAGTTGGTTTGTGGAGT...GGCCATGAATAGAATATCTGAAAGCATCGTTATTAATGCACCCAAGTAAAGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547327.2
3UTR TCA 72 bp CTGCCAACCACAGTGGATCTAGAGAGCCAAGTGAGCTaGAGAAAGACTGCTAGGGACAGACGAGAACTCAAA +
Preference number: 3 (lower is better)
Translates to: LPTTVDLESQVS*RKTARDRRELK
Trigger: TTTGAGTTCTCGTCTGTCCCTAGCAGTCTTTCTTCAGCTCACTTGGCTCTCTAGATCCACTGTGGTTGGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250457.9
3UTR-3UTR CAA 90 bp CACAGTGTTTCCAATACCCTTTCCCTCCTTTGGATCTTTGAGAACCTCGTCTTACTGAGCCCCTTAACGTaGACTTTCGCTCAGAGGAGC +
Preference number: 3 (lower is better)
Translates to: HSVSNTLSLLWIFENLVLLSPLT*TFAQRS
Trigger: GCTCCTCTGAGCGAAAGTCAACGTTAAGGGGCTCAG...TAAGACGAGGTTCTCAAAGATCCAAAGGAGGGAAAGGGTATTGGAAACACTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547327.2
3UTR GCA 72 bp GCAGCATTCAGAAGTGGAGTTTTACCCTTTCACACCTaGCCAACTCCACAAACCAACTGCCACATGGCAAAA +
Preference number: 3 (lower is better)
Translates to: AAFRSGVLPFHT*PTPQTNCHMAK
Trigger: TTTTGCCATGTGGCAGTTGGTTTGTGGAGTTGGGCAGGTGTGAAAGGGTAAAACTCCACTTCTGAATGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547327.2
3UTR GCA 72 bp GAGAGAATTTTCAGTCAAGAAGATGGTCTAACAATGTaGTGGGTCCCAGGGGGCAGAAGCAGCATTCAGAAG +
Preference number: 3 (lower is better)
Translates to: ERIFSQEDGLTM*WVPGGRSSIQK
Trigger: CTTCTGAATGCTGCTTCTGCCCCCTGGGACCCAGCACATTGTTAGACCATCTTCTTGACTGAAAATTCTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547327.2
3UTR CCA 72 bp AGAATTTTCAGTCAAGAAGATGGTCTAACAATGTGCTaGGTCCCAGGGGGCAGAAGCAGCATTCAGAAGTGG +
Preference number: 3 (lower is better)
Translates to: RIFSQEDGLTMC*VPGGRSSIQKW
Trigger: CCACTTCTGAATGCTGCTTCTGCCCCCTGGGACCCAGCACATTGTTAGACCATCTTCTTGACTGAAAATTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547327.2
3UTR TCA 72 bp CAGTGTTTCCAATACCCTTTCCCTCCTTTGGATCTTTaGGAACCTCGTCTTAAAATCGGACCACAGCCACAG +
Preference number: 3 (lower is better)
Translates to: QCFQYPFPPLDL*EPRLKIGPQPQ
Trigger: CTGTGGCTGTGGTCCGATTTTAAGACGAGGTTCTCAAAGATCCAAAGGAGGGAAAGGGTATTGGAAACACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547327.2
3UTR-3UTR CAA 90 bp AATTCCATGATTCTGGTCATACTGCCAACCACAGTGGATCTAGAGAGCCAAGTGACCTCCCCTCTCAAATaGTTCAAGATGCACACATGT +
Preference number: 3 (lower is better)
Translates to: NSMILVILPTTVDLESQVTSPLK*FKMHTC
Trigger: ACATGTGTGCATCTTGAACAATTTGAGAGGGGAGGT...CACTTGGCTCTCTAGATCCACTGTGGTTGGCAGTATGACCAGAATCATGGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250457.9
3UTR-3UTR CAA 90 bp TTCCAATCCTCACCACTTAGCCTTTATTCAGAGTGTTCCTCTCAGCGTATTAGAGCAAGTCACTCAGAATaGCCACTGGAAAACTGGCTC +
Preference number: 3 (lower is better)
Translates to: FQSSPLSLYSECSSQRIRASHSE*PLENWL
Trigger: GAGCCAGTTTTCCAGTGGCAATTCTGAGTGACTTGC...TCTAATACGCTGAGAGGAACACTCTGAATAAAGGCTAAGTGGTGAGGATTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547327.2
3UTR TCA 72 bp TCGAAAGGTGATTTATCTAAAGGGCAGGGAGCTTTGTaGCAAACCAGCCAAAGTAAACCTGGAAATCTGGGG +
Preference number: 3 (lower is better)
Translates to: SKGDLSKGQGAL*QTSQSKPGNLG
Trigger: CCCCAGATTTCCAGGTTTACTTTGGCTGGTTTGTCACAAAGCTCCCTGCCCTTTAGATAAATCACCTTTCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547327.2
3UTR GCA 72 bp GTGAGTGTTCATCTTCCCTCTCATGCCGGTATACTCTaGTTCGCTGTTTCAGTAAAAGTTTTCCGTAGTTCT +
Preference number: 3 (lower is better)
Translates to: VSVHLPSHAGIL*FAVSVKVFRSS
Trigger: AGAACTACGGAAAACTTTTACTGAAACAGCGAAGCAGAGTATACCGGCATGAGAGGGAAGATGAACACTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547327.2
3UTR CCA 72 bp ATAACGATGCTTTCAGATATTCTATTCATGGCCTCTTaGCTTGGAAGTTGTACGGCAAACTGTGACTCCCCA +
Preference number: 3 (lower is better)
Translates to: ITMLSDILFMAS*LGSCTANCDSP
Trigger: TGGGGAGTCACAGTTTGCCGTACAACTTCCAAGCCAAGAGGCCATGAATAGAATATCTGAAAGCATCGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547327.2
3UTR TCA 72 bp CTGGAAAACTGGCTCAACTATCATTTGAGGAAAGACTaGGAAAGCCTATCCCAAAGTAATGGACATGCACCA +
Preference number: 3 (lower is better)
Translates to: LENWLNYHLRKD*ESLSQSNGHAP
Trigger: TGGTGCATGTCCATTACTTTGGGATAGGCTTTCTCAGTCTTTCCTCAAATGATAGTTGAGCCAGTTTTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547327.2
3UTR TCA 72 bp CAGAATTGCCACTGGAAAACTGGCTCAACTATCATTTaGGGAAAGACTGAGAAAGCCTATCCCAAAGTAATG +
Preference number: 3 (lower is better)
Translates to: QNCHWKTGSTII*GKTEKAYPKVM
Trigger: CATTACTTTGGGATAGGCTTTCTCAGTCTTTCCTCAAATGATAGTTGAGCCAGTTTTCCAGTGGCAATTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547327.2
3UTR-3UTR CAA 90 bp TGTTTATTGTATATCAGTAGACCTAGCTCTTTCCACAGTTATCAGTGGTTAACAGAAGTAGCAGGGAGATaGTTGTCACTGAAGAGGCCA +
Preference number: 3 (lower is better)
Translates to: CLLYISRPSSFHSYQWLTEVAGR*LSLKRP
Trigger: TGGCCTCTTCAGTGACAACAATCTCCCTGCTACTTC...TGTTAACCACTGATAACTGTGGAAAGAGCTAGGTCTACTGATATACAATAAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250457.9
3UTR-3UTR CAA 90 bp CACAGTTCTAGCAAATTCCATGATTCTGGTCATACTGCCAACCACAGTGGATCTAAGATCAACACAGTCTaGGCAAGAAAACATGAAGTA +
Preference number: 3 (lower is better)
Translates to: HSSSKFHDSGHTANHSGSKINTV*ARKHEV
Trigger: TACTTCATGTTTTCTTGCCAAGACTGTGTTGATCTT...AGATCCACTGTGGTTGGCAGTATGACCAGAATCATGGAATTTGCTAGAACTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250457.9
3UTR-3UTR CAA 90 bp TGTTTATTGTATATCAGTAGACCTAGCTCTTTCCACAGTTATCAGTGGTTAACACTGAAGAGGCCATCTTaGGATCTCAAAGAATTTAAG +
Preference number: 3 (lower is better)
Translates to: CLLYISRPSSFHSYQWLTLKRPS*DLKEFK
Trigger: CTTAAATTCTTTGAGATCCAAAGATGGCCTCTTCAG...TGTTAACCACTGATAACTGTGGAAAGAGCTAGGTCTACTGATATACAATAAACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250457.9
3UTR CCA 72 bp TATATCAGTAGACCTAGCTCTTTCCACAGTTATCAGTaGTTAACACAAAACTACCAGGGATATATTTTTCCT +
Preference number: 3 (lower is better)
Translates to: YISRPSSFHSYQ*LTQNYQGYIFP
Trigger: AGGAAAAATATATCCCTGGTAGTTTTGTGTTAACCACTGATAACTGTGGAAAGAGCTAGGTCTACTGATATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000250457.9
CDS-3UTR GCA 90 bp GTGCGATCTGTGCTTACTGCAGGAGTAGAAGCTTCCACAGTTCTAGCAAATTCCTGGCCCGGCGAGCAGTaGGGCGCAAGGAGTCGGAGG +
Preference number: 4 (lower is better)
Translates to: VRSVLTAGVEASTVLANSWPGEQ*GARSRR
Trigger: CCTCCGACTCCTTGCGCCGCACTGCTCGCCGGGCCA...GGAATTTGCTAGAACTGTGGAAGCTTCTACTCCTGCAGTAAGCACAGATCGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250457.9
CDS-3UTR GCA 90 bp CCAATCTACCTGTGTTTCCAAGATAAATTACCACCCAGGGAGTCACTTCCTGCTTGGCCCGGCGAGCAGTaGGGCGCAAGGAGTCGGAGG +
Preference number: 4 (lower is better)
Translates to: PIYLCFQDKLPPRESLPAWPGEQ*GARSRR
Trigger: CCTCCGACTCCTTGCGCCGCACTGCTCGCCGGGCCA...AGCAGGAAGTGACTCCCTGGGTGGTAATTTATCTTGGAAACACAGGTAGATTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547327.2
CDS-3UTR TCA 90 bp GAGAACCTCGTCTTAAAATCGGACCACAGCCACAGCTTGTCTGGCTTTTGTCACTGCAGTGCAGCTGCTTaGCGCGCTCCAGGACGCAGT +
Preference number: 4 (lower is better)
Translates to: ENLVLKSDHSHSLSGFCHCSAAA*RAPGRS
Trigger: ACTGCGTCCTGGAGCGCGTCAAGCAGCTGCACTGCA...GTGACAAAAGCCAGACAAGCTGTGGCTGTGGTCCGATTTTAAGACGAGGTTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547327.2
CDS-3UTR GCA 90 bp CCAATCTACCTGTGTTTCCAAGATAAATTACCACCCAGGGAGTCACTTCCTGCTCGGTACCCGAGCCGCTaGAGCGTCGGGGACAAGGGA +
Preference number: 4 (lower is better)
Translates to: PIYLCFQDKLPPRESLPARYPSR*SVGDKG
Trigger: TCCCTTGTCCCCGACGCTGCAGCGGCTCGGGTACCG...AGCAGGAAGTGACTCCCTGGGTGGTAATTTATCTTGGAAACACAGGTAGATTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547327.2
CDS-3UTR GCA 90 bp AGCGCAAGTCACTCAGAATTGCCACTGGAAAACTGGCTCAACTATCATTTGAGGACAACGGACTCCGAGTaGCTCCCGTCCCCGCGGGAG +
Preference number: 4 (lower is better)
Translates to: SASHSELPLENWLNYHLRTTDSE*LPSPRE
Trigger: CTCCCGCGGGGACGGGAGGCACTCGGAGTCCGTTGT...CCTCAAATGATAGTTGAGCCAGTTTTCCAGTGGCAATTCTGAGTGACTTGCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547327.2
CDS-3UTR CCA 90 bp CACAGTTCTAGCAAATTCCATGATTCTGGTCATACTGCCAACCACAGTGGATCTGACCCGTTTCCGGACTaGCCCGGCGAGCAGTGCGGC +
Preference number: 4 (lower is better)
Translates to: HSSSKFHDSGHTANHSGSDPFPD*PGEQCG
Trigger: GCCGCACTGCTCGCCGGGCCAGTCCGGAAACGGGTC...AGATCCACTGTGGTTGGCAGTATGACCAGAATCATGGAATTTGCTAGAACTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250457.9
CDS-3UTR CCA 90 bp AATTCCATGATTCTGGTCATACTGCCAACCACAGTGGATCTAGAGAGCCAAGTGGAGGCGCGGGGAGCGTaGCCCGGGGTTCAGAAACCT +
Preference number: 4 (lower is better)
Translates to: NSMILVILPTTVDLESQVEARGA*PGVQKP
Trigger: AGGTTTCTGAACCCCGGGCCACGCTCCCCGCGCCTC...CACTTGGCTCTCTAGATCCACTGTGGTTGGCAGTATGACCAGAATCATGGAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000250457.9
CDS-3UTR TCA 90 bp CACAGTTCTAGCAAATTCCATGATTCTGGTCATACTGCCAACCACAGTGGATCTTGCCCCCGATCCACGTaGTCTGGTCGCCCCGCAGGT +
Preference number: 4 (lower is better)
Translates to: HSSSKFHDSGHTANHSGSCPRST*SGRPAG
Trigger: ACCTGCGGGGCGACCAGATCACGTGGATCGGGGGCA...AGATCCACTGTGGTTGGCAGTATGACCAGAATCATGGAATTTGCTAGAACTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000250457.9
CDS-3UTR GCA 90 bp GTGCGATCTGTGCTTACTGCAGGAGTAGAAGCTTCCACAGTTCTAGCAAATTCCAACCAGCGGGAGTGGTaGGGAGCTCCACGACCCGTT +
Preference number: 4 (lower is better)
Translates to: VRSVLTAGVEASTVLANSNQREW*GAPRPV
Trigger: AACGGGTCGTGGAGCTCCGCACCACTCCCGCTGGTT...GGAATTTGCTAGAACTGTGGAAGCTTCTACTCCTGCAGTAAGCACAGATCGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250457.9
CDS-3UTR GCA 90 bp TCAGGAGAGAATTTTCAGTCAAGAAGATGGTCTAACAATGTGCTGGGTCCCAGGCCGGTGCAGTGCAGCTaGTTGACGCGCTCCAGGACG +
Preference number: 4 (lower is better)
Translates to: SGENFQSRRWSNNVLGPRPVQCS*LTRSRT
Trigger: CGTCCTGGAGCGCGTCAAGCAGCTGCACTGCACCGG...CCTGGGACCCAGCACATTGTTAGACCATCTTCTTGACTGAAAATTCTCTCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547327.2
CDS-3UTR GCA 90 bp AGAAGCTTCCACAGTTCTAGCAAATTCCATGATTCTGGTCATACTGCCAACCACAGGGCCCCGGTGCAGTaGAGCTGCTTGACGCGCTCC +
Preference number: 4 (lower is better)
Translates to: RSFHSSSKFHDSGHTANHRAPVQ*SCLTRS
Trigger: GGAGCGCGTCAAGCAGCTGCACTGCACCGGGGCCCT...GTGGTTGGCAGTATGACCAGAATCATGGAATTTGCTAGAACTGTGGAAGCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250457.9
CDS-3UTR GCA 90 bp CACAGTGTTTCCAATACCCTTTCCCTCCTTTGGATCTTTGAGAACCTCGTCTTAAGGGCCCCGGTGCAGTaGAGCTGCTTGACGCGCTCC +
Preference number: 4 (lower is better)
Translates to: HSVSNTLSLLWIFENLVLRAPVQ*SCLTRS
Trigger: GGAGCGCGTCAAGCAGCTGCACTGCACCGGGGCCCT...TAAGACGAGGTTCTCAAAGATCCAAAGGAGGGAAAGGGTATTGGAAACACTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547327.2
CDS-3UTR TCA 90 bp AGTCACTCAGAATTGCCACTGGAAAACTGGCTCAACTATCATTTGAGGAAAGACTGCCCCCGATCCACGTaGTCTGGTCGCCCCGCAGGT +
Preference number: 4 (lower is better)
Translates to: SHSELPLENWLNYHLRKDCPRST*SGRPAG
Trigger: ACCTGCGGGGCGACCAGATCACGTGGATCGGGGGCA...GTCTTTCCTCAAATGATAGTTGAGCCAGTTTTCCAGTGGCAATTCTGAGTGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000547327.2
CDS-3UTR GCA 90 bp GTGCGATCTGTGCTTACTGCAGGAGTAGAAGCTTCCACAGTTCTAGCAAATTCCTCGGGAGAAGGGATCTaGCTTCGGGAACCAGCGGGA +
Preference number: 4 (lower is better)
Translates to: VRSVLTAGVEASTVLANSSGEGI*LREPAG
Trigger: TCCCGCTGGTTCCCGAAGGCAGATCCCTTCTCCCGA...GGAATTTGCTAGAACTGTGGAAGCTTCTACTCCTGCAGTAAGCACAGATCGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250457.9
CDS-3UTR GCA 90 bp AATTCCATGATTCTGGTCATACTGCCAACCACAGTGGATCTAGAGAGCCAAGTGCGGGGTTCAGAAACCTaGGGCTGCCACGGTACCCGA +
Preference number: 4 (lower is better)
Translates to: NSMILVILPTTVDLESQVRGSET*GCHGTR
Trigger: TCGGGTACCGTGGCAGCCGCAGGTTTCTGAACCCCG...CACTTGGCTCTCTAGATCCACTGTGGTTGGCAGTATGACCAGAATCATGGAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250457.9
CDS-3UTR GCA 90 bp CCAATCTACCTGTGTTTCCAAGATAAATTACCACCCAGGGAGTCACTTCCTGCTCGGGGTTCAGAAACCTaGGGCTGCCACGGTACCCGA +
Preference number: 4 (lower is better)
Translates to: PIYLCFQDKLPPRESLPARGSET*GCHGTR
Trigger: TCGGGTACCGTGGCAGCCGCAGGTTTCTGAACCCCG...AGCAGGAAGTGACTCCCTGGGTGGTAATTTATCTTGGAAACACAGGTAGATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547327.2
CDS-3UTR GCA 90 bp AGAAGCTTCCACAGTTCTAGCAAATTCCATGATTCTGGTCATACTGCCAACCACCCGGTGCAGTGCAGCTaGTTGACGCGCTCCAGGACG +
Preference number: 4 (lower is better)
Translates to: RSFHSSSKFHDSGHTANHPVQCS*LTRSRT
Trigger: CGTCCTGGAGCGCGTCAAGCAGCTGCACTGCACCGG...GTGGTTGGCAGTATGACCAGAATCATGGAATTTGCTAGAACTGTGGAAGCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250457.9
CDS-3UTR GCA 90 bp GAGAACCTCGTCTTAAAATCGGACCACAGCCACAGCTTGTCTGGCTTTTGTCACACTGTGACTCCCCACTaGACTCATCCACCTCCACCC +
Preference number: 4 (lower is better)
Translates to: ENLVLKSDHSHSLSGFCHTVTPH*THPPPP
Trigger: GGGTGGAGGTGGATGAGTGCAGTGGGGAGTCACAGT...GTGACAAAAGCCAGACAAGCTGTGGCTGTGGTCCGATTTTAAGACGAGGTTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000547327.2
CDS-3UTR CCA 90 bp CACAGTTCTAGCAAATTCCATGATTCTGGTCATACTGCCAACCACAGTGGATCTGGCGCCTTTTGGGGATaGGAAGCCACCACTGCCGCG +
Preference number: 4 (lower is better)
Translates to: HSSSKFHDSGHTANHSGSGAFWG*EATTAA
Trigger: CGCGGCAGTGGTGGCTTCCCATCCCCAAAAGGCGCC...AGATCCACTGTGGTTGGCAGTATGACCAGAATCATGGAATTTGCTAGAACTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000250457.9
CDS-3UTR CCA 90 bp CACAGTGTTTCCAATACCCTTTCCCTCCTTTGGATCTTTGAGAACCTCGTCTTAGGCGCCTTTTGGGGATaGGAAGCCACCACTGCCGCG +
Preference number: 4 (lower is better)
Translates to: HSVSNTLSLLWIFENLVLGAFWG*EATTAA
Trigger: CGCGGCAGTGGTGGCTTCCCATCCCCAAAAGGCGCC...TAAGACGAGGTTCTCAAAGATCCAAAGGAGGGAAAGGGTATTGGAAACACTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547327.2
CDS-3UTR CCA 90 bp TTCCAATCCTCACCACTTAGCCTTTATTCAGAGTGTTCCTCTCAGCGTATTAGAGGGAACCAGCGGGAGTaGTGCGGAGCTCCACGACCC +
Preference number: 4 (lower is better)
Translates to: FQSSPLSLYSECSSQRIRGNQRE*CGAPRP
Trigger: GGGTCGTGGAGCTCCGCACCACTCCCGCTGGTTCCC...TCTAATACGCTGAGAGGAACACTCTGAATAAAGGCTAAGTGGTGAGGATTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547327.2
CDS-3UTR CCA 90 bp ATATTTCAAAGTCAACAGAAGGTCATCATCATGGTTCACCTGAGCCCCTTAACGGAGGCGCGGGGAGCGTaGCCCGGGGTTCAGAAACCT +
Preference number: 4 (lower is better)
Translates to: IFQSQQKVIIMVHLSPLTEARGA*PGVQKP
Trigger: AGGTTTCTGAACCCCGGGCCACGCTCCCCGCGCCTC...CGTTAAGGGGCTCAGGTGAACCATGATGATGACCTTCTGTTGACTTTGAAATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000547327.2
CDS-3UTR CCA 90 bp AGAAGCTTCCACAGTTCTAGCAAATTCCATGATTCTGGTCATACTGCCAACCACCCGATCCACGTGATCTaGTCGCCCCGCAGGTGTCGC +
Preference number: 4 (lower is better)
Translates to: RSFHSSSKFHDSGHTANHPIHVI*SPRRCR
Trigger: GCGACACCTGCGGGGCGACCAGATCACGTGGATCGG...GTGGTTGGCAGTATGACCAGAATCATGGAATTTGCTAGAACTGTGGAAGCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250457.9
CDS-3UTR CCA 90 bp GCTGGGTCCCAGGGGGCAGAAGCAGCATTCAGAAGTGGAGTTTTACCCTTTCACTTAGGAAAAGGAAGGTaGTGGTGCAGGGCTCAGCAT +
Preference number: 4 (lower is better)
Translates to: AGSQGAEAAFRSGVLPFHLGKGR*WCRAQH
Trigger: ATGCTGAGCCCTGCACCACCACCTTCCTTTTCCTAA...GTGAAAGGGTAAAACTCCACTTCTGAATGCTGCTTCTGCCCCCTGGGACCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000547327.2
CDS-3UTR GCA 90 bp TCCAATCCTCACCACTTAGCCTTTATTCAGAGTGTTCCTCTCAGCGTATTAGAGAACCAGCGGGAGTGGTaGGGAGCTCCACGACCCGTT +
Preference number: 4 (lower is better)
Translates to: SNPHHLAFIQSVPLSVLENQREW*GAPRPV
Trigger: AACGGGTCGTGGAGCTCCGCACCACTCCCGCTGGTT...CTCTAATACGCTGAGAGGAACACTCTGAATAAAGGCTAAGTGGTGAGGATTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547327.2
CDS-3UTR GCA 90 bp CACAGTTCTAGCAAATTCCATGATTCTGGTCATACTGCCAACCACAGTGGATCTTCAGAAACCTGCGGCTaGCACGGTACCCGAGCCGCT +
Preference number: 4 (lower is better)
Translates to: HSSSKFHDSGHTANHSGSSETCG*HGTRAA
Trigger: AGCGGCTCGGGTACCGTGGCAGCCGCAGGTTTCTGA...AGATCCACTGTGGTTGGCAGTATGACCAGAATCATGGAATTTGCTAGAACTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250457.9
CDS-3UTR CCA 90 bp TTCCAATCCTCACCACTTAGCCTTTATTCAGAGTGTTCCTCTCAGCGTATTAGACCGATCCACGTGATCTaGTCGCCCCGCAGGTGTCGC +
Preference number: 4 (lower is better)
Translates to: FQSSPLSLYSECSSQRIRPIHVI*SPRRCR
Trigger: GCGACACCTGCGGGGCGACCAGATCACGTGGATCGG...TCTAATACGCTGAGAGGAACACTCTGAATAAAGGCTAAGTGGTGAGGATTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547327.2
CDS-3UTR CCA 90 bp GAGAGAATTTTCAGTCAAGAAGATGGTCTAACAATGTGCTGGGTCCCAGGGGGCGTTCGCTTACGGCCCTaGGAAGTCGACATACAACGG +
Preference number: 4 (lower is better)
Translates to: ERIFSQEDGLTMCWVPGGVRLRP*EVDIQR
Trigger: CCGTTGTATGTCGACTTCCCAGGGCCGTAAGCGAAC...GCCCCCTGGGACCCAGCACATTGTTAGACCATCTTCTTGACTGAAAATTCTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547327.2
CDS-3UTR TCA 90 bp GAGAGAATTTTCAGTCAAGAAGATGGTCTAACAATGTGCTGGGTCCCAGGGGGCTTGTACGGCAAACTGTaGCTCCCCACTGCACTCATC +
Preference number: 4 (lower is better)
Translates to: ERIFSQEDGLTMCWVPGGLYGKL*LPTALI
Trigger: GATGAGTGCAGTGGGGAGTCACAGTTTGCCGTACAA...GCCCCCTGGGACCCAGCACATTGTTAGACCATCTTCTTGACTGAAAATTCTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000547327.2
CDS-3UTR GCA 90 bp ATATTTCAAAGTCAACAGAAGGTCATCATCATGGTTCACCTGAGCCCCTTAACGTCAGAAACCTGCGGCTaGCACGGTACCCGAGCCGCT +
Preference number: 4 (lower is better)
Translates to: IFQSQQKVIIMVHLSPLTSETCG*HGTRAA
Trigger: AGCGGCTCGGGTACCGTGGCAGCCGCAGGTTTCTGA...CGTTAAGGGGCTCAGGTGAACCATGATGATGACCTTCTGTTGACTTTGAAATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547327.2
CDS-3UTR CCA 90 bp AGAAGCTTCCACAGTTCTAGCAAATTCCATGATTCTGGTCATACTGCCAACCACTCGGAGGGCGCCTTTTaGGGATGGGAAGCCACCACT +
Preference number: 4 (lower is better)
Translates to: RSFHSSSKFHDSGHTANHSEGAF*GWEATT
Trigger: AGTGGTGGCTTCCCATCCCCAAAAGGCGCCCTCCGA...GTGGTTGGCAGTATGACCAGAATCATGGAATTTGCTAGAACTGTGGAAGCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250457.9
CDS-3UTR TCA 90 bp GAGAACCTCGTCTTAAAATCGGACCACAGCCACAGCTTGTCTGGCTTTTGTCACGTTCTGAACGTCCCTTaGCCACACCATAAGACAAGC +
Preference number: 4 (lower is better)
Translates to: ENLVLKSDHSHSLSGFCHVLNVP*PHHKTS
Trigger: GCTTGTCTTATGGTGTGGTCAAGGGACGTTCAGAAC...GTGACAAAAGCCAGACAAGCTGTGGCTGTGGTCCGATTTTAAGACGAGGTTCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547327.2
CDS-3UTR GCA 90 bp AAACCAGCCAAAGTAAACCTGGAAATCTGGGGGTGGGACAGGATAAATTTTATTATGGGAAGCCACCACTaGCGCGACTGCGGCCAGACT +
Preference number: 4 (lower is better)
Translates to: KPAKVNLEIWGWDRINFIMGSHH*RDCGQT
Trigger: AGTCTGGCCGCAGTCGCGGCAGTGGTGGCTTCCCAT...AATAAAATTTATCCTGTCCCACCCCCAGATTTCCAGGTTTACTTTGGCTGGTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547327.2
CDS-3UTR CCA 90 bp TTCCAATCCTCACCACTTAGCCTTTATTCAGAGTGTTCCTCTCAGCGTATTAGATCGGAGGGCGCCTTTTaGGGATGGGAAGCCACCACT +
Preference number: 4 (lower is better)
Translates to: FQSSPLSLYSECSSQRIRSEGAF*GWEATT
Trigger: AGTGGTGGCTTCCCATCCCCAAAAGGCGCCCTCCGA...TCTAATACGCTGAGAGGAACACTCTGAATAAAGGCTAAGTGGTGAGGATTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547327.2
CDS-3UTR GCA 90 bp AATATACAAAATTCCTGTCTTCATTGTGCTTACACTCCAGAGAAAGGATACAAGCGGTACCCGAGCCGCTaGAGCGTCGGGGACAAGGGA +
Preference number: 4 (lower is better)
Translates to: NIQNSCLHCAYTPEKGYKRYPSR*SVGDKG
Trigger: TCCCTTGTCCCCGACGCTGCAGCGGCTCGGGTACCG...CTTGTATCCTTTCTCTGGAGTGTAAGCACAATGAAGACAGGAATTTTGTATATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000250457.9
CDS-3UTR CCA 90 bp TGTTTATTGTATATCAGTAGACCTAGCTCTTTCCACAGTTATCAGTGGTTAACAGGGAACCAGCGGGAGTaGTGCGGAGCTCCACGACCC +
Preference number: 4 (lower is better)
Translates to: CLLYISRPSSFHSYQWLTGNQRE*CGAPRP
Trigger: GGGTCGTGGAGCTCCGCACCACTCCCGCTGGTTCCC...TGTTAACCACTGATAACTGTGGAAAGAGCTAGGTCTACTGATATACAATAAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250457.9
CDS-3UTR CCA 90 bp CACAGTGTTTCCAATACCCTTTCCCTCCTTTGGATCTTTGAGAACCTCGTCTTAGGAAAAGGAAGGTGGTaGTGCAGGGCTCAGCATCAG +
Preference number: 4 (lower is better)
Translates to: HSVSNTLSLLWIFENLVLGKGRW*CRAQHQ
Trigger: CTGATGCTGAGCCCTGCACCACCACCTTCCTTTTCC...TAAGACGAGGTTCTCAAAGATCCAAAGGAGGGAAAGGGTATTGGAAACACTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547327.2
3UTR CAA 72 bp CGATGCTTTCAGATATTCTATTCATGGCCTCTTGGCTaGGAAGTTGTACGGCAAACTGTGACTCCCCACTGC +
Preference number: 4 (lower is better)
Translates to: RCFQIFYSWPLG*EVVRQTVTPHC
Trigger: GCAGTGGGGAGTCACAGTTTGCCGTACAACTTCCAAGCCAAGAGGCCATGAATAGAATATCTGAAAGCATCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547327.2
CDS-3UTR TCA 90 bp AATTCCATGATTCTGGTCATACTGCCAACCACAGTGGATCTAGAGAGCCAAGTGTGGGTTCCTACGATCTaGCCAGAAGAACAGGAGTCT +
Preference number: 4 (lower is better)
Translates to: NSMILVILPTTVDLESQVWVPTI*PEEQES
Trigger: AGACTCCTGTTCTTCTGGTCAGATCGTAGGAACCCA...CACTTGGCTCTCTAGATCCACTGTGGTTGGCAGTATGACCAGAATCATGGAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250457.9
CDS-3UTR TCA 90 bp AGCGCAAGTCACTCAGAATTGCCACTGGAAAACTGGCTCAACTATCATTTGAGGTTCACGATCACCTTCTaGCAGGGTCACCTGGAAAGT +
Preference number: 4 (lower is better)
Translates to: SASHSELPLENWLNYHLRFTITF*QGHLES
Trigger: ACTTTCCAGGTGACCCTGTCAGAAGGTGATCGTGAA...CCTCAAATGATAGTTGAGCCAGTTTTCCAGTGGCAATTCTGAGTGACTTGCGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547327.2
CDS-3UTR GCA 90 bp TTCCAATCCTCACCACTTAGCCTTTATTCAGAGTGTTCCTCTCAGCGTATTAGAGATGGTCTAACAATGTaGTGGGTCCCAGGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: FQSSPLSLYSECSSQRIRDGLTM*WVPGGR
Trigger: TCTGCCCCCTGGGACCCAGCACATTGTTAGACCATC...TCTAATACGCTGAGAGGAACACTCTGAATAAAGGCTAAGTGGTGAGGATTGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547327.2
CDS-3UTR GCA 90 bp ATATTTCAAAGTCAACAGAAGGTCATCATCATGGTTCACCTGAGCCCCTTAACGAAAGGAAGGTGGTGGTaGAGGGCTCAGCATCAGGAG +
Preference number: 4 (lower is better)
Translates to: IFQSQQKVIIMVHLSPLTKGRWW*RAQHQE
Trigger: CTCCTGATGCTGAGCCCTGCACCACCACCTTCCTTT...CGTTAAGGGGCTCAGGTGAACCATGATGATGACCTTCTGTTGACTTTGAAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547327.2
CDS-3UTR TCA 90 bp TGTTTATTGTATATCAGTAGACCTAGCTCTTTCCACAGTTATCAGTGGTTAACATGCAGTGCAGCTGCTTaGCGCGCTCCAGGACGCAGT +
Preference number: 4 (lower is better)
Translates to: CLLYISRPSSFHSYQWLTCSAAA*RAPGRS
Trigger: ACTGCGTCCTGGAGCGCGTCAAGCAGCTGCACTGCA...TGTTAACCACTGATAACTGTGGAAAGAGCTAGGTCTACTGATATACAATAAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250457.9
CDS-3UTR TCA 90 bp AGTCACTCAGAATTGCCACTGGAAAACTGGCTCAACTATCATTTGAGGAAAGACCTTTCTGGAGGTGCTTaGCTACTCTCTCGTGAGCAC +
Preference number: 4 (lower is better)
Translates to: SHSELPLENWLNYHLRKDLSGGA*LLSREH
Trigger: GTGCTCACGAGAGAGTAGTCAAGCACCTCCAGAAAG...GTCTTTCCTCAAATGATAGTTGAGCCAGTTTTCCAGTGGCAATTCTGAGTGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547327.2
CDS-3UTR GCA 90 bp GCTCAATACCAAGTTATTGAGGCAGTGCGATCTGTGCTTACTGCAGGAGTAGAAATAGCAAGCCACCATTaGCTTAGACCTCTCCTTGAC +
Preference number: 4 (lower is better)
Translates to: AQYQVIEAVRSVLTAGVEIASHH*LRPLLD
Trigger: GTCAAGGAGAGGTCTAAGGCAATGGTGGCTTGCTAT...TTCTACTCCTGCAGTAAGCACAGATCGCACTGCCTCAATAACTTGGTATTGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250457.9
CDS-3UTR GCA 90 bp CCAATCTACCTGTGTTTCCAAGATAAATTACCACCCAGGGAGTCACTTCCTGCTCAGGGAGTCACTTCCTaGTATGTGAACAAAAACCCG +
Preference number: 4 (lower is better)
Translates to: PIYLCFQDKLPPRESLPAQGVTS*YVNKNP
Trigger: CGGGTTTTTGTTCACATAGCAGGAAGTGACTCCCTG...AGCAGGAAGTGACTCCCTGGGTGGTAATTTATCTTGGAAACACAGGTAGATTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547327.2
CDS-3UTR CCA 90 bp GACAAGCGCAAGTCACTCAGAATTGCCACTGGAAAACTGGCTCAACTATCATTTCAGCCACAGCTTGTCTaGCTTTTGTCACCCACAAGA +
Preference number: 4 (lower is better)
Translates to: DKRKSLRIATGKLAQLSFQPQLV*LLSPTR
Trigger: TCTTGTGGGTGACAAAAGCCAGACAAGCTGTGGCTG...AAATGATAGTTGAGCCAGTTTTCCAGTGGCAATTCTGAGTGACTTGCGCTTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547327.2
CDS-3UTR CCA 90 bp GAGAACCTCGTCTTAAAATCGGACCACAGCCACAGCTTGTCTGGCTTTTGTCACTTGCCACTGGAAAACTaGCTCAACTATCATTTGAGG +
Preference number: 4 (lower is better)
Translates to: ENLVLKSDHSHSLSGFCHLPLEN*LNYHLR
Trigger: CCTCAAATGATAGTTGAGCCAGTTTTCCAGTGGCAA...GTGACAAAAGCCAGACAAGCTGTGGCTGTGGTCCGATTTTAAGACGAGGTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000547327.2
CDS-3UTR CCA 90 bp GCCAGGGAATATTCCAATCGAAAGGTGATTTATCTAAAGGGCAGGGAGCTTTGTCATGGCCTCTTGGCTTaGAAGTTGTACGGCAAACTG +
Preference number: 4 (lower is better)
Translates to: AREYSNRKVIYLKGRELCHGLLA*KLYGKL
Trigger: CAGTTTGCCGTACAACTTCCAAGCCAAGAGGCCATG...ACAAAGCTCCCTGCCCTTTAGATAAATCACCTTTCGATTGGAATATTCCCTGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547327.2
CDS-3UTR TCA 90 bp GCTCAATACCAAGTTATTGAGGCAGTGCGATCTGTGCTTACTGCAGGAGTAGAATCAATACCAAGTTATTaGGGCAGTGCGATCTGTGCT +
Preference number: 4 (lower is better)
Translates to: AQYQVIEAVRSVLTAGVESIPSY*GSAICA
Trigger: AGCACAGATCGCACTGCCTCAATAACTTGGTATTGA...TTCTACTCCTGCAGTAAGCACAGATCGCACTGCCTCAATAACTTGGTATTGAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250457.9
CDS-3UTR TCA 90 bp CCCAAAGTAATGGACATGCACCAACATCGCGGTACCTACATGTTCCCGTTTTTCCCTCCTTTGGATCTTTaGGAACCTCGTCTTAAAATC +
Preference number: 4 (lower is better)
Translates to: PKVMDMHQHRGTYMFPFFPPLDL*EPRLKI
Trigger: GATTTTAAGACGAGGTTCTCAAAGATCCAAAGGAGG...GAAAAACGGGAACATGTAGGTACCGCGATGTTGGTGCATGTCCATTACTTTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547327.2
CDS-3UTR GCA 90 bp GAGAGAATTTTCAGTCAAGAAGATGGTCTAACAATGTGCTGGGTCCCAGGGGGCACTACACTAGTTGTTTaGTCAAGCCTGGTTTGCATT +
Preference number: 4 (lower is better)
Translates to: ERIFSQEDGLTMCWVPGGTTLVV*SSLVCI
Trigger: AATGCAAACCAGGCTTGAGCAAACAACTAGTGTAGT...GCCCCCTGGGACCCAGCACATTGTTAGACCATCTTCTTGACTGAAAATTCTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547327.2
CDS-3UTR CCA 90 bp AACGATGCTTTCAGATATTCTATTCATGGCCTCTTGGCTTGGAAGTTGTACGGCCTATTCATGGCCTCTTaGCTTGGAAGTTGTACGGCA +
Preference number: 4 (lower is better)
Translates to: NDAFRYSIHGLLAWKLYGLFMAS*LGSCTA
Trigger: TGCCGTACAACTTCCAAGCCAAGAGGCCATGAATAG...GCCGTACAACTTCCAAGCCAAGAGGCCATGAATAGAATATCTGAAAGCATCGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547327.2
CDS-3UTR TCA 90 bp GAGAACCTCGTCTTAAAATCGGACCACAGCCACAGCTTGTCTGGCTTTTGTCACAATCCACCACCAACATaGTGGAAGAAGAATAAAGAA +
Preference number: 4 (lower is better)
Translates to: ENLVLKSDHSHSLSGFCHNPPPT*WKKNKE
Trigger: TTCTTTATTCTTCTTCCATCATGTTGGTGGTGGATT...GTGACAAAAGCCAGACAAGCTGTGGCTGTGGTCCGATTTTAAGACGAGGTTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547327.2
CDS-3UTR TCA 90 bp GCCAGGGAATATTCCAATCGAAAGGTGATTTATCTAAAGGGCAGGGAGCTTTGTCTAGTCAAAGACGAGTaGCTAATCCACCACCAACAT +
Preference number: 4 (lower is better)
Translates to: AREYSNRKVIYLKGRELCLVKDE*LIHHQH
Trigger: ATGTTGGTGGTGGATTAGTCACTCGTCTTTGACTAG...ACAAAGCTCCCTGCCCTTTAGATAAATCACCTTTCGATTGGAATATTCCCTGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547327.2
CDS-3UTR TCA 90 bp AAACCAGCCAAAGTAAACCTGGAAATCTGGGGGTGGGACAGGATAAATTTTATTGGGCAGGGAGCTTTGTaGCAAACCAGCCAAAGTAAA +
Preference number: 4 (lower is better)
Translates to: KPAKVNLEIWGWDRINFIGQGAL*QTSQSK
Trigger: TTTACTTTGGCTGGTTTGTCACAAAGCTCCCTGCCC...AATAAAATTTATCCTGTCCCACCCCCAGATTTCCAGGTTTACTTTGGCTGGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547327.2
CDS-3UTR GCA 90 bp CCTTCACTCCCACACGTTTCCAATCCTCACCACTTAGCCTTTATTCAGAGTGTTACTCCACAAACCAACTaGCACATGGCAAAATCACAA +
Preference number: 4 (lower is better)
Translates to: PSLPHVSNPHHLAFIQSVTPQTN*HMAKSQ
Trigger: TTGTGATTTTGCCATGTGGCAGTTGGTTTGTGGAGT...AACACTCTGAATAAAGGCTAAGTGGTGAGGATTGGAAACGTGTGGGAGTGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547327.2
CDS-3UTR GCA 90 bp TTCCAATCCTCACCACTTAGCCTTTATTCAGAGTGTTCCTCTCAGCGTATTAGATTACCCTTTCACACCTaGCCAACTCCACAAACCAAC +
Preference number: 4 (lower is better)
Translates to: FQSSPLSLYSECSSQRIRLPFHT*PTPQTN
Trigger: GTTGGTTTGTGGAGTTGGGCAGGTGTGAAAGGGTAA...TCTAATACGCTGAGAGGAACACTCTGAATAAAGGCTAAGTGGTGAGGATTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547327.2
CDS-3UTR GCA 90 bp CCAATCTACCTGTGTTTCCAAGATAAATTACCACCCAGGGAGTCACTTCCTGCTATGTTCCCGTTTTTCTaGCAATCTACCTGTGTTTCC +
Preference number: 4 (lower is better)
Translates to: PIYLCFQDKLPPRESLPAMFPFF*QSTCVS
Trigger: GGAAACACAGGTAGATTGGCAGAAAAACGGGAACAT...AGCAGGAAGTGACTCCCTGGGTGGTAATTTATCTTGGAAACACAGGTAGATTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547327.2
CDS-3UTR CCA 90 bp AATATACAAAATTCCTGTCTTCATTGTGCTTACACTCCAGAGAAAGGATACAAGAGCGACCATCACCGTTaGGGTTGTCCACGTGGCGAA +
Preference number: 4 (lower is better)
Translates to: NIQNSCLHCAYTPEKGYKSDHHR*GCPRGE
Trigger: TTCGCCACGTGGACAACCCCAACGGTGATGGTCGCT...CTTGTATCCTTTCTCTGGAGTGTAAGCACAATGAAGACAGGAATTTTGTATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250457.9
CDS-3UTR CCA 90 bp AGAAGCTTCCACAGTTCTAGCAAATTCCATGATTCTGGTCATACTGCCAACCACGGAGTGTCTGCCCCATaGGACACTTATAAATTGTTC +
Preference number: 4 (lower is better)
Translates to: RSFHSSSKFHDSGHTANHGVSAP*DTYKLF
Trigger: GAACAATTTATAAGTGTCCCATGGGGCAGACACTCC...GTGGTTGGCAGTATGACCAGAATCATGGAATTTGCTAGAACTGTGGAAGCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250457.9
CDS-3UTR CCA 90 bp CCAATCTACCTGTGTTTCCAAGATAAATTACCACCCAGGGAGTCACTTCCTGCTACTCAGAATTGCCACTaGAAAACTGGCTCAACTATC +
Preference number: 4 (lower is better)
Translates to: PIYLCFQDKLPPRESLPATQNCH*KTGSTI
Trigger: GATAGTTGAGCCAGTTTTCCAGTGGCAATTCTGAGT...AGCAGGAAGTGACTCCCTGGGTGGTAATTTATCTTGGAAACACAGGTAGATTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547327.2
CDS-3UTR CCA 90 bp CACAGTGTTTCCAATACCCTTTCCCTCCTTTGGATCTTTGAGAACCTCGTCTTATCTGACAGGGTCACCTaGAAAGTTTTTCATTCCACC +
Preference number: 4 (lower is better)
Translates to: HSVSNTLSLLWIFENLVLSDRVT*KVFHST
Trigger: GGTGGAATGAAAAACTTTCCAGGTGACCCTGTCAGA...TAAGACGAGGTTCTCAAAGATCCAAAGGAGGGAAAGGGTATTGGAAACACTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547327.2
CDS-3UTR CCA 90 bp TCCAATCCTCACCACTTAGCCTTTATTCAGAGTGTTCCTCTCAGCGTATTAGAGGTAAACCTGGAAATCTaGGGGTGGGACAGGATAAAT +
Preference number: 4 (lower is better)
Translates to: SNPHHLAFIQSVPLSVLEVNLEI*GWDRIN
Trigger: ATTTATCCTGTCCCACCCCCAGATTTCCAGGTTTAC...CTCTAATACGCTGAGAGGAACACTCTGAATAAAGGCTAAGTGGTGAGGATTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547327.2
3UTR CAA 72 bp CTTAAAATCGGACCACAGCCACAGCTTGTCTGGCTTTaGTCACCCACAAGAGCCAATATTTCAAAGTCAACA +
Preference number: 4 (lower is better)
Translates to: LKIGPQPQLVWL*SPTRANISKST
Trigger: TGTTGACTTTGAAATATTGGCTCTTGTGGGTGACAAAAGCCAGACAAGCTGTGGCTGTGGTCCGATTTTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547327.2
CDS-3UTR TCA 90 bp AATTCCATGATTCTGGTCATACTGCCAACCACAGTGGATCTAGAGAGCCAAGTGCACTATTTTAGGTGCTaGGAGTATGTTGCATTGGTT +
Preference number: 4 (lower is better)
Translates to: NSMILVILPTTVDLESQVHYFRC*EYVALV
Trigger: AACCAATGCAACATACTCTCAGCACCTAAAATAGTG...CACTTGGCTCTCTAGATCCACTGTGGTTGGCAGTATGACCAGAATCATGGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250457.9
CDS-3UTR TCA 90 bp TTCCAATCCTCACCACTTAGCCTTTATTCAGAGTGTTCCTCTCAGCGTATTAGAAGGCATTTAAGATCATaGGGACACGTGTGTCTCAGA +
Preference number: 4 (lower is better)
Translates to: FQSSPLSLYSECSSQRIRRHLRS*GHVCLR
Trigger: TCTGAGACACACGTGTCCTCATGATCTTAAATGCCT...TCTAATACGCTGAGAGGAACACTCTGAATAAAGGCTAAGTGGTGAGGATTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547327.2
CDS-3UTR TCA 90 bp CCCTCTCATGCCGGTATACTCTGCTTCGCTGTTTCAGTAAAAGTTTTCCGTAGTCTTAACTGGTTGTTTTaGGTGGACTTTGCCATCAAT +
Preference number: 4 (lower is better)
Translates to: PSHAGILCFAVSVKVFRSLNWLF*VDFAIN
Trigger: ATTGATGGCAAAGTCCACTCAAAACAACCAGTTAAG...ACTACGGAAAACTTTTACTGAAACAGCGAAGCAGAGTATACCGGCATGAGAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000547327.2
CDS-3UTR TCA 90 bp TTCCTGCTATGTGAACAAAAACCCGGTTTCTTTCTGGAGGTGCTTGACTACTCTTTGACTACTCTCTCGTaGGCACTTAACTGGTTGTTT +
Preference number: 4 (lower is better)
Translates to: FLLCEQKPGFFLEVLDYSLTTLS*ALNWLF
Trigger: AAACAACCAGTTAAGTGCTCACGAGAGAGTAGTCAA...AGAGTAGTCAAGCACCTCCAGAAAGAAACCGGGTTTTTGTTCACATAGCAGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547327.2
CDS-3UTR TCA 90 bp GCTCAAGCCTGGTTTGCATTTGGTTCTAATTGGCCAGGGAATATTCCAATCGAATCACTTCCTGCTATGTaGACAAAAACCCGGTTTCTT +
Preference number: 4 (lower is better)
Translates to: AQAWFAFGSNWPGNIPIESLPAM*TKTRFL
Trigger: AAGAAACCGGGTTTTTGTTCACATAGCAGGAAGTGA...TTCGATTGGAATATTCCCTGGCCAATTAGAACCAAATGCAAACCAGGCTTGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547327.2
CDS-3UTR TCA 90 bp GCCAGGGAATATTCCAATCGAAAGGTGATTTATCTAAAGGGCAGGGAGCTTTGTCATTTGAGGAAAGACTaGGAAAGCCTATCCCAAAGT +
Preference number: 4 (lower is better)
Translates to: AREYSNRKVIYLKGRELCHLRKD*ESLSQS
Trigger: ACTTTGGGATAGGCTTTCTCAGTCTTTCCTCAAATG...ACAAAGCTCCCTGCCCTTTAGATAAATCACCTTTCGATTGGAATATTCCCTGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547327.2
CDS-3UTR TCA 90 bp AGTCACTCAGAATTGCCACTGGAAAACTGGCTCAACTATCATTTGAGGAAAGACGGCTCAACTATCATTTaGGGAAAGACTGAGAAAGCC +
Preference number: 4 (lower is better)
Translates to: SHSELPLENWLNYHLRKDGSTII*GKTEKA
Trigger: GGCTTTCTCAGTCTTTCCTCAAATGATAGTTGAGCC...GTCTTTCCTCAAATGATAGTTGAGCCAGTTTTCCAGTGGCAATTCTGAGTGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547327.2
CDS-3UTR GCA 90 bp GACAAGCGCAAGTCACTCAGAATTGCCACTGGAAAACTGGCTCAACTATCATTTCATGCCGGTATACTCTaGTTCGCTGTTTCAGTAAAA +
Preference number: 4 (lower is better)
Translates to: DKRKSLRIATGKLAQLSFHAGIL*FAVSVK
Trigger: TTTTACTGAAACAGCGAAGCAGAGTATACCGGCATG...AAATGATAGTTGAGCCAGTTTTCCAGTGGCAATTCTGAGTGACTTGCGCTTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547327.2
CDS-3UTR CCA 90 bp CCCTCTCATGCCGGTATACTCTGCTTCGCTGTTTCAGTAAAAGTTTTCCGTAGTGAAATGAGAGAACAATaGTCTGTTCTGAGACAGGAT +
Preference number: 4 (lower is better)
Translates to: PSHAGILCFAVSVKVFRSEMREQ*SVLRQD
Trigger: ATCCTGTCTCAGAACAGACCATTGTTCTCTCATTTC...ACTACGGAAAACTTTTACTGAAACAGCGAAGCAGAGTATACCGGCATGAGAGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547327.2
CDS-3UTR TCA 90 bp AGAAGCTTCCACAGTTCTAGCAAATTCCATGATTCTGGTCATACTGCCAACCACCACATCTGCTATGAATaGTTTCCCCTCTGGAAATAT +
Preference number: 4 (lower is better)
Translates to: RSFHSSSKFHDSGHTANHHICYE*FPLWKY
Trigger: ATATTTCCAGAGGGGAAATCATTCATAGCAGATGTG...GTGGTTGGCAGTATGACCAGAATCATGGAATTTGCTAGAACTGTGGAAGCTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250457.9
CDS-3UTR TCA 90 bp TGTTTATTGTATATCAGTAGACCTAGCTCTTTCCACAGTTATCAGTGGTTAACAGAGAGCCAAGTGAGCTaGAGAAAGACTGCTAGGGAC +
Preference number: 4 (lower is better)
Translates to: CLLYISRPSSFHSYQWLTESQVS*RKTARD
Trigger: GTCCCTAGCAGTCTTTCTTCAGCTCACTTGGCTCTC...TGTTAACCACTGATAACTGTGGAAAGAGCTAGGTCTACTGATATACAATAAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250457.9
CDS-3UTR TCA 90 bp ATATTTCAAAGTCAACAGAAGGTCATCATCATGGTTCACCTGAGCCCCTTAACGCACGTGTGTCTCAGATaGTACACAGTGTTTCCAATA +
Preference number: 4 (lower is better)
Translates to: IFQSQQKVIIMVHLSPLTHVCLR*YTVFPI
Trigger: TATTGGAAACACTGTGTATCATCTGAGACACACGTG...CGTTAAGGGGCTCAGGTGAACCATGATGATGACCTTCTGTTGACTTTGAAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547327.2
CDS-3UTR TCA 90 bp TCCAATCCTCACCACTTAGCCTTTATTCAGAGTGTTCCTCTCAGCGTATTAGAGAGCGTATTAGAGAAATaGGAGAACAATGGTCTGTTC +
Preference number: 4 (lower is better)
Translates to: SNPHHLAFIQSVPLSVLESVLEK*ENNGLF
Trigger: GAACAGACCATTGTTCTCTCATTTCTCTAATACGCT...CTCTAATACGCTGAGAGGAACACTCTGAATAAAGGCTAAGTGGTGAGGATTGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547327.2
CDS-3UTR CCA 90 bp CCAATCTACCTGTGTTTCCAAGATAAATTACCACCCAGGGAGTCACTTCCTGCTTTGTTTGCTCAAGCCTaGTTTGCATTTGGTTCTAAT +
Preference number: 4 (lower is better)
Translates to: PIYLCFQDKLPPRESLPALFAQA*FAFGSN
Trigger: ATTAGAACCAAATGCAAACCAGGCTTGAGCAAACAA...AGCAGGAAGTGACTCCCTGGGTGGTAATTTATCTTGGAAACACAGGTAGATTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547327.2
CDS-3UTR TCA 90 bp TGTTTATTGTATATCAGTAGACCTAGCTCTTTCCACAGTTATCAGTGGTTAACAACGGTCAGTCTTCAGTaGGGGCAGATTCAGTTTTCC +
Preference number: 4 (lower is better)
Translates to: CLLYISRPSSFHSYQWLTTVSLQ*GQIQFS
Trigger: GGAAAACTGAATCTGCCCTCACTGAAGACTGACCGT...TGTTAACCACTGATAACTGTGGAAAGAGCTAGGTCTACTGATATACAATAAACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000250457.9
CDS-3UTR GCA 90 bp AACGATGCTTTCAGATATTCTATTCATGGCCTCTTGGCTTGGAAGTTGTACGGCCTCCAGAATTCTGAGTaGTTTTGTAGAAATCTCTTC +
Preference number: 4 (lower is better)
Translates to: NDAFRYSIHGLLAWKLYGLQNSE*FCRNLF
Trigger: GAAGAGATTTCTACAAAAGCACTCAGAATTCTGGAG...GCCGTACAACTTCCAAGCCAAGAGGCCATGAATAGAATATCTGAAAGCATCGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547327.2
CDS-3UTR CCA 90 bp TGTTTATTGTATATCAGTAGACCTAGCTCTTTCCACAGTTATCAGTGGTTAACACGTGATGCCTCTCTGTaGCATCTACCACCTCCATTT +
Preference number: 4 (lower is better)
Translates to: CLLYISRPSSFHSYQWLTRDASL*HLPPPF
Trigger: AAATGGAGGTGGTAGATGCCACAGAGAGGCATCACG...TGTTAACCACTGATAACTGTGGAAAGAGCTAGGTCTACTGATATACAATAAACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250457.9
CDS-3UTR CCA 90 bp AGTCACTCAGAATTGCCACTGGAAAACTGGCTCAACTATCATTTGAGGAAAGACTTTCAGTCAAGAAGATaGTCTAACAATGTGCTGGGT +
Preference number: 4 (lower is better)
Translates to: SHSELPLENWLNYHLRKDFQSRR*SNNVLG
Trigger: ACCCAGCACATTGTTAGACCATCTTCTTGACTGAAA...GTCTTTCCTCAAATGATAGTTGAGCCAGTTTTCCAGTGGCAATTCTGAGTGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547327.2
CDS-3UTR CCA 90 bp TCCAATCCTCACCACTTAGCCTTTATTCAGAGTGTTCCTCTCAGCGTATTAGAGACTGGTTGTTTTGAGTaGACTTTGCCATCAATTCAT +
Preference number: 4 (lower is better)
Translates to: SNPHHLAFIQSVPLSVLETGCFE*TLPSIH
Trigger: ATGAATTGATGGCAAAGTCCACTCAAAACAACCAGT...CTCTAATACGCTGAGAGGAACACTCTGAATAAAGGCTAAGTGGTGAGGATTGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547327.2
CDS-3UTR GCA 90 bp TGTTTATTGTATATCAGTAGACCTAGCTCTTTCCACAGTTATCAGTGGTTAACACATAGCATATCTGGTTaGGTAAGAGGGCTGCACTTC +
Preference number: 4 (lower is better)
Translates to: CLLYISRPSSFHSYQWLTHSISG*VRGLHF
Trigger: GAAGTGCAGCCCTCTTACGCAACCAGATATGCTATG...TGTTAACCACTGATAACTGTGGAAAGAGCTAGGTCTACTGATATACAATAAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250457.9
3UTR CAA 72 bp AACTACACTAGTTGTTTGCTCAAGCCTGGTTTGCATTaGGTTCTAATTGGCCAGGGAATATTCCAATCGAAA +
Preference number: 4 (lower is better)
Translates to: NYTSCLLKPGLH*VLIGQGIFQSK
Trigger: TTTCGATTGGAATATTCCCTGGCCAATTAGAACCAAATGCAAACCAGGCTTGAGCAAACAACTAGTGTAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547327.2
CDS-3UTR TCA 90 bp TTACTTTACTTGGGTGCATTAATAACGATGCTTTCAGATATTCTATTCATGGCCAACAATGGTCTGTTCTaGGACAGGATCAGTCTTGAG +
Preference number: 4 (lower is better)
Translates to: LLYLGALITMLSDILFMANNGLF*DRISLE
Trigger: CTCAAGACTGATCCTGTCTCAGAACAGACCATTGTT...GGCCATGAATAGAATATCTGAAAGCATCGTTATTAATGCACCCAAGTAAAGTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547327.2
CDS-3UTR CCA 90 bp TGTTTATTGTATATCAGTAGACCTAGCTCTTTCCACAGTTATCAGTGGTTAACATCCCACCATGTAGCTTaGCATCCCAATTCTTGTTCA +
Preference number: 4 (lower is better)
Translates to: CLLYISRPSSFHSYQWLTSHHVA*HPNSCS
Trigger: TGAACAAGAATTGGGATGCCAAGCTACATGGTGGGA...TGTTAACCACTGATAACTGTGGAAAGAGCTAGGTCTACTGATATACAATAAACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250457.9
3UTR CAA 72 bp AAATTTAACTACACTAGTTGTTTGCTCAAGCCTGGTTaGCATTTGGTTCTAATTGGCCAGGGAATATTCCAA +
Preference number: 4 (lower is better)
Translates to: KFNYTSCLLKPG*HLVLIGQGIFQ
Trigger: TTGGAATATTCCCTGGCCAATTAGAACCAAATGCAAACCAGGCTTGAGCAAACAACTAGTGTAGTTAAATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547327.2
CDS-3UTR CCA 90 bp AATATACAAAATTCCTGTCTTCATTGTGCTTACACTCCAGAGAAAGGATACAAGTTCCACAGTTATCAGTaGTTAACACAAAACTACCAG +
Preference number: 4 (lower is better)
Translates to: NIQNSCLHCAYTPEKGYKFHSYQ*LTQNYQ
Trigger: CTGGTAGTTTTGTGTTAACCACTGATAACTGTGGAA...CTTGTATCCTTTCTCTGGAGTGTAAGCACAATGAAGACAGGAATTTTGTATATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000250457.9
CDS-3UTR CCA 90 bp TTACTTTACTTGGGTGCATTAATAACGATGCTTTCAGATATTCTATTCATGGCCTTTATTGTCAAAGAGTaGTACATAGGTGAGTGTTCA +
Preference number: 4 (lower is better)
Translates to: LLYLGALITMLSDILFMAFIVKE*YIGECS
Trigger: TGAACACTCACCTATGTACCACTCTTTGACAATAAA...GGCCATGAATAGAATATCTGAAAGCATCGTTATTAATGCACCCAAGTAAAGTAA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547327.2
CDS CCA 90 bp CTGATGGCCTCGCAGCCCTCCTCGTTGCCCCCGATCCACGTGATCTaGTCGCCCCGCAGGTGTCGCTTGGAGACGCCGGCGCGCGGCCCC +
Preference number: 5 (lower is better)
Translates to: LMASQPSSLPPIHVI*SPRRCRLETPARGP
Trigger: GGGGCCGCGCGCCGGCGTCTCCAAGCGACACCTGCGGGGCGACCAGATCACGTGGATCGGGGGCAACGAGGAGGGCTGCGAGGCCATCAG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000250457.9
ENST00000547327.2
CDS GCA 90 bp GGTGCGGAGCTCCACGACCCGTTTCCGGACTGGCCCGGCGAGCAGTaGGGCGCAAGGAGTCGGAGGGCGCCTTTTGGGGATGGGAAGCCA +
Preference number: 5 (lower is better)
Translates to: GAELHDPFPDWPGEQ*GARSRRAPFGDGKP
Trigger: TGGCTTCCCATCCCCAAAAGGCGCCCTCCGACTCCTTGCGCCGCACTGCTCGCCGGGCCAGTCCGGAAACGGGTCGTGGAGCTCCGCACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250457.9
ENST00000547327.2
CDS GCA 90 bp AGTTCGCTTACGGCCCTGGGAAGTCGACATACAACGGACTCCGAGTaGCTCCCGTCCCCGCGGGAGCAGCTGCGGCAGGGCGCCGAGCGC +
Preference number: 5 (lower is better)
Translates to: SSLTALGSRHTTDSE*LPSPREQLRQGAER
Trigger: GCGCTCGGCGCCCTGCCGCAGCTGCTCCCGCGGGGACGGGAGGCACTCGGAGTCCGTTGTATGTCGACTTCCCAGGGCCGTAAGCGAACT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547327.2
CDS CCA 90 bp AGAGGGAACGATCTACACGAGCGCGAAGCCGAGGCGCGGGGAGCGTaGCCCGGGGTTCAGAAACCTGCGGCTGCCACGGTACCCGAGCCG +
Preference number: 5 (lower is better)
Translates to: RGNDLHEREAEARGA*PGVQKPAAATVPEP
Trigger: CGGCTCGGGTACCGTGGCAGCCGCAGGTTTCTGAACCCCGGGCCACGCTCCCCGCGCCTCGGCTTCGCGCTCGTGTAGATCGTTCCCTCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250457.9
ENST00000547327.2
CDS GCA 90 bp GACATACAACGGACTCCGAGTGCCTCCCGTCCCCGCGGGAGCAGCTaGGGCAGGGCGCCGAGCGCGTCCTACCTTAGACCTCTCCTTGAC +
Preference number: 5 (lower is better)
Translates to: DIQRTPSASRPRGSS*GRAPSASYLRPLLD
Trigger: GTCAAGGAGAGGTCTAAGGTAGGACGCGCTCGGCGCCCTGCCGCAGCTGCTCCCGCGGGGACGGGAGGCACTCGGAGTCCGTTGTATGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547327.2
CDS GCA 90 bp GGCCCGGGGTTCAGAAACCTGCGGCTGCCACGGTACCCGAGCCGCTaGAGCGTCGGGGACAAGGGAAAGTTTCTCGCAACTCTCGGGAGA +
Preference number: 5 (lower is better)
Translates to: GPGFRNLRLPRYPSR*SVGDKGKFLATLGR
Trigger: TCTCCCGAGAGTTGCGAGAAACTTTCCCTTGTCCCCGACGCTGCAGCGGCTCGGGTACCGTGGCAGCCGCAGGTTTCTGAACCCCGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250457.9
ENST00000547327.2
CDS GCA 90 bp TCCAAGAAAGGCAAGTGTCGTGCCCAGGCCCTGACACGTTCAGGCTaGCTCCTGGTAGCTGCTTGTGCAGCTGGCGGCCTAGCTGGGAGA +
Preference number: 5 (lower is better)
Translates to: SKKGKCRAQALTRSG*LLVAACAAGGLAGR
Trigger: TCTCCCAGCTAGGCCGCCAGCTGCACAAGCAGCTACCAGGAGGCAGCCTGAACGTGTCAGGGCCTGGGCACGACACTTGCCTTTCTTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551935.5
CDS CCA 90 bp TCAGTTCCTTGCCATGTGGGCCCCTCCATAGGGCTACTCACAACATaGCAGCTGGCTGTTGCCTGCTGGCTGCCCTCAGTTCCTCGCCAC +
Preference number: 5 (lower is better)
Translates to: SVPCHVGPSIGLLTT*QLAVACWLPSVPRH
Trigger: GTGGCGAGGAACTGAGGGCAGCCAGCAGGCAACAGCCAGCTGCCATGTTGTGAGTAGCCCTATGGAGGGGCCCACATGGCAAGGAACTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000550114.5
ENST00000551935.5
CDS GCA 90 bp TGCCCAGGCCCTGACACGTTCAGGCTGCCTCCTGGTAGCTGCTTGTaGAGCTGGCGGCCTAGCTGGGAGACAAGCATTAATCAAGTCGTG +
Preference number: 5 (lower is better)
Translates to: CPGPDTFRLPPGSCL*SWRPSWETSINQVV
Trigger: CACGACTTGATTAATGCTTGTCTCCCAGCTAGGCCGCCAGCTGCACAAGCAGCTACCAGGAGGCAGCCTGAACGTGTCAGGGCCTGGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551935.5
CDS GCA 90 bp GTGTCGTGCCCAGGCCCTGACACGTTCAGGCTGCCTCCTGGTAGCTaGTTGTGCAGCTGGCGGCCTAGCTGGGAGACAAGCATTAATCAA +
Preference number: 5 (lower is better)
Translates to: VSCPGPDTFRLPPGS*LCSWRPSWETSINQ
Trigger: TTGATTAATGCTTGTCTCCCAGCTAGGCCGCCAGCTGCACAAGCAGCTACCAGGAGGCAGCCTGAACGTGTCAGGGCCTGGGCACGACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551935.5
CDS CCA 90 bp GGCCCTGACACGTTCAGGCTGCCTCCTGGTAGCTGCTTGTGCAGCTaGCGGCCTAGCTGGGAGACAAGCATTAATCAAGTCGTGATCCGT +
Preference number: 5 (lower is better)
Translates to: GPDTFRLPPGSCLCS*RPSWETSINQVVIR
Trigger: ACGGATCACGACTTGATTAATGCTTGTCTCCCAGCTAGGCCGCCAGCTGCACAAGCAGCTACCAGGAGGCAGCCTGAACGTGTCAGGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551935.5
CDS GCA 90 bp GCCAGTTATAGCATAGGAGAGGTGGAGTCCTTCAGTTCAGAGAAATaGCCCTTCCATGGGCCACAGGAGGATCCCCCAGCCAAGGCCACA +
Preference number: 5 (lower is better)
Translates to: ASYSIGEVESFSSEK*PFHGPQEDPPAKAT
Trigger: TGTGGCCTTGGCTGGGGGATCCTCCTGTGGCCCATGGAAGGGGCATTTCTCTGAACTGAAGGACTCCACCTCTCCTATGCTATAACTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546681.5
CDS GCA 90 bp TTCCACTATGGCTTCAAATCACTCCTCCAAGAAAGGCAAGTGTCGTaGCCAGGCCCTGACACGTTCAGGCTGCCTCCTGGTAGCTGCAAC +
Preference number: 5 (lower is better)
Translates to: FHYGFKSLLQERQVS*PGPDTFRLPPGSCN
Trigger: GTTGCAGCTACCAGGAGGCAGCCTGAACGTGTCAGGGCCTGGGCACGACACTTGCCTTTCTTGGAGGAGTGATTTGAAGCCATAGTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487915.6
CDS GCA 90 bp TTCCACTATGGCTTCAAATCACTCCTCCAAGAAAGGCAAGTGTCGTaGCCAGGCCCTGACACGTTCAGGCTGCCTCCTGGTAGCTGCTTG +
Preference number: 5 (lower is better)
Translates to: FHYGFKSLLQERQVS*PGPDTFRLPPGSCL
Trigger: CAAGCAGCTACCAGGAGGCAGCCTGAACGTGTCAGGGCCTGGGCACGACACTTGCCTTTCTTGGAGGAGTGATTTGAAGCCATAGTGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551935.5
CDS CCA 90 bp CAGGCCAAGGCCAACCTAGCTGCCTGTAAATGGGAAAGGAATCTATaGGTGGGGAAGGGAGGTGGCAGAGGGTTCATTTCAGGCTCCCAT +
Preference number: 5 (lower is better)
Translates to: QAKANLAACKWERNL*VGKGGGRGFISGSH
Trigger: ATGGGAGCCTGAAATGAACCCTCTGCCACCTCCCTTCCCCACCCATAGATTCCTTTCCCATTTACAGGCAGCTAGGTTGGCCTTGGCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557521.1
CDS TCA 90 bp GGCTGCCTCCTGGTAGCTGAGAAACCAGAAGTAGTTTCCCCTGGCTaGTCTTTGAGGGTGTCCCCTTTAAACTTGCCAGCCTCCTTCCGT +
Preference number: 5 (lower is better)
Translates to: GCLLVAEKPEVVSPG*SLRVSPLNLPASFR
Trigger: ACGGAAGGAGGCTGGCAAGTTTAAAGGGGACACCCTCAAAGATCAGCCAGGGGAAACTACTTCTGGTTTCTCAGCTACCAGGAGGCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548285.5
CDS GCA 90 bp TTCCACTATGGCTTCAAATCACTCCTCCAAGAAAGGCAAGTGTCGTaGCCAGGCCCTGACACGTTCAGGCTGCCTCCTGGTAGCTGTTTG +
Preference number: 5 (lower is better)
Translates to: FHYGFKSLLQERQVS*PGPDTFRLPPGSCL
Trigger: CAAACAGCTACCAGGAGGCAGCCTGAACGTGTCAGGGCCTGGGCACGACACTTGCCTTTCTTGGAGGAGTGATTTGAAGCCATAGTGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464521.6
CDS GCA 90 bp TTCCACTATGGCTTCAAATCACTCCTCCAAGAAAGGCAAGTGTCGTaGCCAGGCCCTGACACGTTCAGGCTGCCTCCTGGTAGCTGCTTA +
Preference number: 5 (lower is better)
Translates to: FHYGFKSLLQERQVS*PGPDTFRLPPGSCL
Trigger: TAAGCAGCTACCAGGAGGCAGCCTGAACGTGTCAGGGCCTGGGCACGACACTTGCCTTTCTTGGAGGAGTGATTTGAAGCCATAGTGGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546681.5
CDS GCA 90 bp ACCTCAAGGTCTCCCAGAAGGCAACAATCAAGGTGTCAGCCAGACTaGAGTCATCTCAAGGCTCCACTGGGGGAAGATCTGCTTCCAAGC +
Preference number: 5 (lower is better)
Translates to: TSRSPRRQQSRCQPD*SHLKAPLGEDLLPS
Trigger: GCTTGGAAGCAGATCTTCCCCCAGTGGAGCCTTGAGATGACTGCAGTCTGGCTGACACCTTGATTGTTGCCTTCTGGGAGACCTTGAGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550114.5
CDS CCA 90 bp CTGCTCTGCCACCCTCAGTCATTGGCTCCATTCTCAGGCTGCGCATaGCAAGATGGCTTTGGACATAACAACACCTTTCTCCTGGGGCTT +
Preference number: 5 (lower is better)
Translates to: LLCHPQSLAPFSGCA*QDGFGHNNTFLLGL
Trigger: AAGCCCCAGGAGAAAGGTGTTGTTATGTCCAAAGCCATCTTGCCATGCGCAGCCTGAGAATGGAGCCAATGACTGAGGGTGGCAGAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487915.6
ENST00000551935.5
CDS-3UTR CAA 90 bp CCTTCACTCCCACACGTTTCCAATCCTCACCACTTAGCCTTTATTCAGAGTGTTGTGCAGTGCAGCTGCTaGACGCGCTCCAGGACGCAG +
Preference number: 5 (lower is better)
Translates to: PSLPHVSNPHHLAFIQSVVQCSC*TRSRTQ
Trigger: CTGCGTCCTGGAGCGCGTCAAGCAGCTGCACTGCAC...AACACTCTGAATAAAGGCTAAGTGGTGAGGATTGGAAACGTGTGGGAGTGAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547327.2
CDS CCA 90 bp AGCAAGCCACCATTGCCATCTTTCTGCTCTGCCACCCTCAGTCATTaGCTCCATTCTCAGGCTGCGCATGGCAAGATGGCTTTGGACATA +
Preference number: 5 (lower is better)
Translates to: SKPPLPSFCSATLSH*LHSQAAHGKMALDI
Trigger: TATGTCCAAAGCCATCTTGCCATGCGCAGCCTGAGAATGGAGCCAATGACTGAGGGTGGCAGAGCAGAAAGATGGCAATGGTGGCTTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487915.6
CDS CCA 90 bp AACAATCAAGGTGTCAGCCAGACTGCAGTCATCTCAAGGCTCCACTaGGGGAAGATCTGCTTCCAAGCTCCCTCATGTGGCTATTGGCAG +
Preference number: 5 (lower is better)
Translates to: NNQGVSQTAVISRLH*GKICFQAPSCGYWQ
Trigger: CTGCCAATAGCCACATGAGGGAGCTTGGAAGCAGATCTTCCCCCAGTGGAGCCTTGAGATGACTGCAGTCTGGCTGACACCTTGATTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550114.5
CDS-3UTR CAA 90 bp AGAAGCTTCCACAGTTCTAGCAAATTCCATGATTCTGGTCATACTGCCAACCACGTCGGAGGGCGCCTTTaGGGGATGGGAAGCCACCAC +
Preference number: 5 (lower is better)
Translates to: RSFHSSSKFHDSGHTANHVGGRL*GMGSHH
Trigger: GTGGTGGCTTCCCATCCCCAAAAGGCGCCCTCCGAC...GTGGTTGGCAGTATGACCAGAATCATGGAATTTGCTAGAACTGTGGAAGCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250457.9
CDS-3UTR CAA 90 bp GACAAGCGCAAGTCACTCAGAATTGCCACTGGAAAACTGGCTCAACTATCATTTGTCGGAGGGCGCCTTTaGGGGATGGGAAGCCACCAC +
Preference number: 5 (lower is better)
Translates to: DKRKSLRIATGKLAQLSFVGGRL*GMGSHH
Trigger: GTGGTGGCTTCCCATCCCCAAAAGGCGCCCTCCGAC...AAATGATAGTTGAGCCAGTTTTCCAGTGGCAATTCTGAGTGACTTGCGCTTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547327.2
CDS-3UTR CAA 90 bp CACAGTTCTAGCAAATTCCATGATTCTGGTCATACTGCCAACCACAGTGGATCTTCGCAGCCCTCCTCGTaGCCCCCGATCCACGTGATC +
Preference number: 5 (lower is better)
Translates to: HSSSKFHDSGHTANHSGSSQPSS*PPIHVI
Trigger: GATCACGTGGATCGGGGGCAACGAGGAGGGCTGCGA...AGATCCACTGTGGTTGGCAGTATGACCAGAATCATGGAATTTGCTAGAACTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000250457.9
CDS-3UTR CAA 90 bp AATTCCATGATTCTGGTCATACTGCCAACCACAGTGGATCTAGAGAGCCAAGTGCAGCGACCATCACCGTaGGGGTTGTCCACGTGGCGA +
Preference number: 5 (lower is better)
Translates to: NSMILVILPTTVDLESQVQRPSP*GLSTWR
Trigger: TCGCCACGTGGACAACCCCAACGGTGATGGTCGCTG...CACTTGGCTCTCTAGATCCACTGTGGTTGGCAGTATGACCAGAATCATGGAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250457.9
CDS-3UTR CAA 90 bp GCTGGGTCCCAGGGGGCAGAAGCAGCATTCAGAAGTGGAGTTTTACCCTTTCACGCAAGTCACTCAGAATaGCCACTGGAAAACTGGCTC +
Preference number: 5 (lower is better)
Translates to: AGSQGAEAAFRSGVLPFHASHSE*PLENWL
Trigger: GAGCCAGTTTTCCAGTGGCAATTCTGAGTGACTTGC...GTGAAAGGGTAAAACTCCACTTCTGAATGCTGCTTCTGCCCCCTGGGACCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000547327.2
CDS-3UTR CAA 90 bp TGGCTTGGAAGTTGTACGGCAAACTGTGACTCCCCACTGCACTCATCCACCTCCTCATGGCCTCTTGGCTaGGAAGTTGTACGGCAAACT +
Preference number: 5 (lower is better)
Translates to: WLGSCTANCDSPLHSSTSSWPLG*EVVRQT
Trigger: AGTTTGCCGTACAACTTCCAAGCCAAGAGGCCATGA...GGAGGTGGATGAGTGCAGTGGGGAGTCACAGTTTGCCGTACAACTTCCAAGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547327.2
CDS-3UTR CAA 90 bp GAGAACCTCGTCTTAAAATCGGACCACAGCCACAGCTTGTCTGGCTTTTGTCACCTGAGCCCCTTAACGTaGACTTTCGCTCAGAGGAGC +
Preference number: 5 (lower is better)
Translates to: ENLVLKSDHSHSLSGFCHLSPLT*TFAQRS
Trigger: GCTCCTCTGAGCGAAAGTCAACGTTAAGGGGCTCAG...GTGACAAAAGCCAGACAAGCTGTGGCTGTGGTCCGATTTTAAGACGAGGTTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000547327.2
CDS TCA 90 bp CATAGTCTCCAACGAGTACAGGTCTTGGTGCCCAAGGCCATGTGCTaGAGCTGGAATTTGGTTCTCATACACCCTCTCCTCTGTGAGCAA +
Preference number: 5 (lower is better)
Translates to: HSLQRVQVLVPKAMC*SWNLVLIHPLLCEQ
Trigger: TTGCTCACAGAGGAGAGGGTGTATGAGAACCAAATTCCAGCTTCAGCACATGGCCTTGGGCACCAAGACCTGTACTCGTTGGAGACTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546681.5
CDS GCA 90 bp ATCTTTCTGCTCTGCCACCCTCAGTCATTGGCTCCATTCTCAGGCTaGGCATGGCAAGATGGCTTTGGACATAACAACACCTTTCTCCTG +
Preference number: 5 (lower is better)
Translates to: IFLLCHPQSLAPFSG*AWQDGFGHNNTFLL
Trigger: CAGGAGAAAGGTGTTGTTATGTCCAAAGCCATCTTGCCATGCGCAGCCTGAGAATGGAGCCAATGACTGAGGGTGGCAGAGCAGAAAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000487915.6
ENST00000551935.5
CDS GCA 90 bp GATGGATGCTCCCATATCAGCCTCGTACCATTTATCTCATCTTTCTaGTCTGCCACCCTCAGTCATTGGCTCCATTCTCAGGCTGCGCAT +
Preference number: 5 (lower is better)
Translates to: DGCSHISLVPFISSF*SATLSHWLHSQAAH
Trigger: ATGCGCAGCCTGAGAATGGAGCCAATGACTGAGGGTGGCAGAGCAGAAAGATGAGATAAATGGTACGAGGCTGATATGGGAGCATCCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551935.5
CDS GCA 90 bp GAGATGGAAGGTCGTGTACTTCCCGTAAAAGGATGTGAAGCACAGTaGTTTAGCAAGGGATGGTCCAAGCCAAGACATGACGTGCCTGGA +
Preference number: 5 (lower is better)
Translates to: EMEGRVLPVKGCEAQ*FSKGWSKPRHDVPG
Trigger: TCCAGGCACGTCATGTCTTGGCTTGGACCATCCCTTGCTAAAGCACTGTGCTTCACATCCTTTTACGGGAAGTACACGACCTTCCATCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557521.1
CDS GCA 90 bp GTGAAGACAGGAGCTGGGAGTAGCAACCTGGTAGTCAGTGATGGATaGTCCCATATCAGCCTCGTACCATTTATCTCTTCTTGGCTTCAG +
Preference number: 5 (lower is better)
Translates to: VKTGAGSSNLVVSDG*SHISLVPFISSWLQ
Trigger: CTGAAGCCAAGAAGAGATAAATGGTACGAGGCTGATATGGGAGCATCCATCACTGACTACCAGGTTGCTACTCCCAGCTCCTGTCTTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550114.5
CDS GCA 90 bp ATCTTTCTGCTCTGCCACCCTCAGTCATTGGCTCCATTCTCAGGCTaGGCATGGCAAGATGGCTTTGGACATAACAACACCCTTTTGTTC +
Preference number: 5 (lower is better)
Translates to: IFLLCHPQSLAPFSG*AWQDGFGHNNTLLF
Trigger: GAACAAAAGGGTGTTGTTATGTCCAAAGCCATCTTGCCATGCGCAGCCTGAGAATGGAGCCAATGACTGAGGGTGGCAGAGCAGAAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548285.5
CDS CCA 90 bp GAGTACAGGTCTTGGTGCCCAAGGCCATGTGCTGAAGCTGGAATTTaGTTCTCATACACCCTCTCCTCTGTGAGCAAAATGCTGTCTGAT +
Preference number: 5 (lower is better)
Translates to: EYRSWCPRPCAEAGI*FSYTLSSVSKMLSD
Trigger: ATCAGACAGCATTTTGCTCACAGAGGAGAGGGTGTATGAGAACCAAATTCCAGCTTCAGCACATGGCCTTGGGCACCAAGACCTGTACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546681.5
CDS CCA 90 bp TCAGTTCCTCGCCACAGGTCCCCCTCCACAGAGCAGCTCACAACATaGCATCTAGTTGTGTCCTTAAAAGGAAAGTTATGTGCTCTCCTT +
Preference number: 5 (lower is better)
Translates to: SVPRHRSPSTEQLTT*HLVVSLKGKLCALL
Trigger: AAGGAGAGCACATAACTTTCCTTTTAAGGACACAACTAGATGCCATGTTGTGAGCTGCTCTGTGGAGGGGGACCTGTGGCGAGGAACTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551935.5
CDS-3UTR CAA 90 bp GAGAGAATTTTCAGTCAAGAAGATGGTCTAACAATGTGCTGGGTCCCAGGGGGCTCTATTCATGGCCTCTaGGCTTGGAAGTTGTACGGC +
Preference number: 5 (lower is better)
Translates to: ERIFSQEDGLTMCWVPGGSIHGL*AWKLYG
Trigger: GCCGTACAACTTCCAAGCCAAGAGGCCATGAATAGA...GCCCCCTGGGACCCAGCACATTGTTAGACCATCTTCTTGACTGAAAATTCTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547327.2
CDS GCA 90 bp CATGTTGTGTTGTCCATCATAGTCTCCAACGAGTACAGGTCTTGGTaGCCAAGGCCATGTGCTGAAGCTGGAATTTGGTTCTCATACACC +
Preference number: 5 (lower is better)
Translates to: HVVLSIIVSNEYRSW*PRPCAEAGIWFSYT
Trigger: GGTGTATGAGAACCAAATTCCAGCTTCAGCACATGGCCTTGGGCACCAAGACCTGTACTCGTTGGAGACTATGATGGACAACACAACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546681.5
CDS GCA 90 bp GTGAAGACAGGAGCTGGGAGTAGCAACCTGGTAGTCAGTGATGGATaGTCCCATATCAGCCTCGTACCATTTATCTCATCTTTCTGCTCT +
Preference number: 5 (lower is better)
Translates to: VKTGAGSSNLVVSDG*SHISLVPFISSFCS
Trigger: AGAGCAGAAAGATGAGATAAATGGTACGAGGCTGATATGGGAGCATCCATCACTGACTACCAGGTTGCTACTCCCAGCTCCTGTCTTCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551935.5
CDS CCA 90 bp CTCAGCACATTCTGTTGCCCTAGCCTAGCCATTACAATTGCCCAGTaGCCTTTCTTGGGCTACAGATCTTTGCTTTGTTCAACTGAGGAA +
Preference number: 5 (lower is better)
Translates to: LSTFCCPSLAITIAQ*PFLGYRSLLCSTEE
Trigger: TTCCTCAGTTGAACAAAGCAAAGATCTGTAGCCCAAGAAAGGCCACTGGGCAATTGTAATGGCTAGGCTAGGGCAACAGAATGTGCTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557521.1
CDS-3UTR CAA 90 bp TGTTTATTGTATATCAGTAGACCTAGCTCTTTCCACAGTTATCAGTGGTTAACAGTGCAGTGCAGCTGCTaGACGCGCTCCAGGACGCAG +
Preference number: 5 (lower is better)
Translates to: CLLYISRPSSFHSYQWLTVQCSC*TRSRTQ
Trigger: CTGCGTCCTGGAGCGCGTCAAGCAGCTGCACTGCAC...TGTTAACCACTGATAACTGTGGAAAGAGCTAGGTCTACTGATATACAATAAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250457.9
CDS-3UTR CAA 90 bp GAGAGAATTTTCAGTCAAGAAGATGGTCTAACAATGTGCTGGGTCCCAGGGGGCTTGCTCAAGCCTGGTTaGCATTTGGTTCTAATTGGC +
Preference number: 5 (lower is better)
Translates to: ERIFSQEDGLTMCWVPGGLLKPG*HLVLIG
Trigger: GCCAATTAGAACCAAATGCAAACCAGGCTTGAGCAA...GCCCCCTGGGACCCAGCACATTGTTAGACCATCTTCTTGACTGAAAATTCTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547327.2
CDS CCA 90 bp GCTGCGCATGGCAAGATGGCTTTGGACATAACAACACCTTTCTCCTaGGGCTTGTTTTGTATCTGTCCATTAAGAGTGTCCTCGTTCATT +
Preference number: 5 (lower is better)
Translates to: AAHGKMALDITTPFS*GLFCICPLRVSSFI
Trigger: AATGAACGAGGACACTCTTAATGGACAGATACAAAACAAGCCCCAGGAGAAAGGTGTTGTTATGTCCAAAGCCATCTTGCCATGCGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487915.6
ENST00000551935.5
CDS CCA 90 bp ATTCATGTTGTGTTGTCCATCATAGTCTCCAACGAGTACAGGTCTTaGTGCCCAAGGCCATGTGCTGAAGCTGGAATTTGGTTCTCATAC +
Preference number: 5 (lower is better)
Translates to: IHVVLSIIVSNEYRS*CPRPCAEAGIWFSY
Trigger: GTATGAGAACCAAATTCCAGCTTCAGCACATGGCCTTGGGCACCAAGACCTGTACTCGTTGGAGACTATGATGGACAACACAACATGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546681.5
CDS GCA 90 bp CAACATGGCATCTTGCCTAGTTGTGTCCTTAAAAGGAAAGTTATGTaGTCTCCTTGCTCCTTCTCCTCTTCTTACTGGTTGGTATGCAGA +
Preference number: 5 (lower is better)
Translates to: QHGILPSCVLKRKVM*SPCSFSSSYWLVCR
Trigger: TCTGCATACCAACCAGTAAGAAGAGGAGAAGGAGCAAGGAGAGCACATAACTTTCCTTTTAAGGACACAACTAGGCAAGATGCCATGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550114.5
CDS GCA 90 bp GCTCACAACATGGCATCTAGTTGTGTCCTTAAAAGGAAAGTTATGTaGTCTCCTTGCTCCTTCTCCTCTTCTTACTGGTTGGTATGCAGA +
Preference number: 5 (lower is better)
Translates to: AHNMASSCVLKRKVM*SPCSFSSSYWLVCR
Trigger: TCTGCATACCAACCAGTAAGAAGAGGAGAAGGAGCAAGGAGAGCACATAACTTTCCTTTTAAGGACACAACTAGATGCCATGTTGTGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551935.5
CDS-3UTR CAA 90 bp AGAAGCTTCCACAGTTCTAGCAAATTCCATGATTCTGGTCATACTGCCAACCACACCTCCCCTCTCAAATaGTTCAAGATGCACACATGT +
Preference number: 5 (lower is better)
Translates to: RSFHSSSKFHDSGHTANHTSPLK*FKMHTC
Trigger: ACATGTGTGCATCTTGAACAATTTGAGAGGGGAGGT...GTGGTTGGCAGTATGACCAGAATCATGGAATTTGCTAGAACTGTGGAAGCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250457.9
CDS GCA 90 bp ATCTTGCCTAGTTGTGTCCTTAAAAGGAAAGTTATGTGCTCTCCTTaGTCCTTCTCCTCTTCTTACTGGTTGGTATGCAGATGTGAAGAC +
Preference number: 5 (lower is better)
Translates to: ILPSCVLKRKVMCSP*SFSSSYWLVCRCED
Trigger: GTCTTCACATCTGCATACCAACCAGTAAGAAGAGGAGAAGGAGCAAGGAGAGCACATAACTTTCCTTTTAAGGACACAACTAGGCAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550114.5
CDS GCA 90 bp ATGGCATCTAGTTGTGTCCTTAAAAGGAAAGTTATGTGCTCTCCTTaGTCCTTCTCCTCTTCTTACTGGTTGGTATGCAGATGTGAAGAC +
Preference number: 5 (lower is better)
Translates to: MASSCVLKRKVMCSP*SFSSSYWLVCRCED
Trigger: GTCTTCACATCTGCATACCAACCAGTAAGAAGAGGAGAAGGAGCAAGGAGAGCACATAACTTTCCTTTTAAGGACACAACTAGATGCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551935.5
CDS-3UTR CAA 90 bp GTGCGATCTGTGCTTACTGCAGGAGTAGAAGCTTCCACAGTTCTAGCAAATTCCAAGATCAACACAGTCTaGGCAAGAAAACATGAAGTA +
Preference number: 5 (lower is better)
Translates to: VRSVLTAGVEASTVLANSKINTV*ARKHEV
Trigger: TACTTCATGTTTTCTTGCCAAGACTGTGTTGATCTT...GGAATTTGCTAGAACTGTGGAAGCTTCTACTCCTGCAGTAAGCACAGATCGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250457.9
CDS-3UTR CAA 90 bp AATTCCATGATTCTGGTCATACTGCCAACCACAGTGGATCTAGAGAGCCAAGTGAAATTCCTGTCTTCATaGTGCTTACACTCCAGAGAA +
Preference number: 5 (lower is better)
Translates to: NSMILVILPTTVDLESQVKFLSS*CLHSRE
Trigger: TTCTCTGGAGTGTAAGCACAATGAAGACAGGAATTT...CACTTGGCTCTCTAGATCCACTGTGGTTGGCAGTATGACCAGAATCATGGAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250457.9
CDS-3UTR CAA 90 bp GTGCGATCTGTGCTTACTGCAGGAGTAGAAGCTTCCACAGTTCTAGCAAATTCCGGTGCTGAGAGTATGTaGCATTGGTTAAAAATATAC +
Preference number: 5 (lower is better)
Translates to: VRSVLTAGVEASTVLANSGAESM*HWLKIY
Trigger: GTATATTTTTAACCAATGCAACATACTCTCAGCACC...GGAATTTGCTAGAACTGTGGAAGCTTCTACTCCTGCAGTAAGCACAGATCGCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000250457.9
CDS-3UTR CAA 90 bp CACAGTGTTTCCAATACCCTTTCCCTCCTTTGGATCTTTGAGAACCTCGTCTTAAACTACACTAGTTGTTaGCTCAAGCCTGGTTTGCAT +
Preference number: 5 (lower is better)
Translates to: HSVSNTLSLLWIFENLVLNYTSC*LKPGLH
Trigger: ATGCAAACCAGGCTTGAGCAAACAACTAGTGTAGTT...TAAGACGAGGTTCTCAAAGATCCAAAGGAGGGAAAGGGTATTGGAAACACTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547327.2
CDS-3UTR CAA 90 bp AATATACAAAATTCCTGTCTTCATTGTGCTTACACTCCAGAGAAAGGATACAAGGAAGTAGCAGGGAGATaGTTGTCACTGAAGAGGCCA +
Preference number: 5 (lower is better)
Translates to: NIQNSCLHCAYTPEKGYKEVAGR*LSLKRP
Trigger: TGGCCTCTTCAGTGACAACAATCTCCCTGCTACTTC...CTTGTATCCTTTCTCTGGAGTGTAAGCACAATGAAGACAGGAATTTTGTATATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250457.9
CDS-3UTR CAA 90 bp CACAGTTCTAGCAAATTCCATGATTCTGGTCATACTGCCAACCACAGTGGATCTAAAATAGAGCAGTCGTaGAGAATTAATGGTGACATG +
Preference number: 5 (lower is better)
Translates to: HSSSKFHDSGHTANHSGSKIEQS*RINGDM
Trigger: CATGTCACCATTAATTCTCAACGACTGCTCTATTTT...AGATCCACTGTGGTTGGCAGTATGACCAGAATCATGGAATTTGCTAGAACTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250457.9
CDS-3UTR CAA 90 bp TGTTTATTGTATATCAGTAGACCTAGCTCTTTCCACAGTTATCAGTGGTTAACAATCCCACCATGTAGCTaGGCATCCCAATTCTTGTTC +
Preference number: 5 (lower is better)
Translates to: CLLYISRPSSFHSYQWLTIPPCS*ASQFLF
Trigger: GAACAAGAATTGGGATGCCAAGCTACATGGTGGGAT...TGTTAACCACTGATAACTGTGGAAAGAGCTAGGTCTACTGATATACAATAAACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000250457.9
CDS-3UTR CAA 90 bp AATATACAAAATTCCTGTCTTCATTGTGCTTACACTCCAGAGAAAGGATACAAGCTCAATACCAAGTTATaGAGGCAGTGCGATCTGTGC +
Preference number: 5 (lower is better)
Translates to: NIQNSCLHCAYTPEKGYKLNTKL*RQCDLC
Trigger: GCACAGATCGCACTGCCTCAATAACTTGGTATTGAG...CTTGTATCCTTTCTCTGGAGTGTAAGCACAATGAAGACAGGAATTTTGTATATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000250457.9
CDS-3UTR CAA 90 bp TTACTTTACTTGGGTGCATTAATAACGATGCTTTCAGATATTCTATTCATGGCCAAGCCTGGTTTGCATTaGGTTCTAATTGGCCAGGGA +
Preference number: 5 (lower is better)
Translates to: LLYLGALITMLSDILFMAKPGLH*VLIGQG
Trigger: TCCCTGGCCAATTAGAACCAAATGCAAACCAGGCTT...GGCCATGAATAGAATATCTGAAAGCATCGTTATTAATGCACCCAAGTAAAGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547327.2
CDS GCA 72 bp CGAGGCGCGGGGAGCGTGGCCCGGGGTTCAGAAACCTaGGGCTGCCACGGTACCCGAGCCGCTGCAGCGTCG +
Preference number: 6 (lower is better)
Translates to: RGAGSVARGSET*GCHGTRAAAAS
Trigger: CGACGCTGCAGCGGCTCGGGTACCGTGGCAGCCGCAGGTTTCTGAACCCCGGGCCACGCTCCCCGCGCCTCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250457.9
ENST00000547327.2
CDS GCA 72 bp CGGACTCCGAGTGCCTCCCGTCCCCGCGGGAGCAGCTaGGGCAGGGCGCCGAGCGCGTCCTACCTTAGACCT +
Preference number: 6 (lower is better)
Translates to: RTPSASRPRGSS*GRAPSASYLRP
Trigger: AGGTCTAAGGTAGGACGCGCTCGGCGCCCTGCCGCAGCTGCTCCCGCGGGGACGGGAGGCACTCGGAGTCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547327.2
CDS CCA 72 bp GGGAGTGGTGCGGAGCTCCACGACCCGTTTCCGGACTaGCCCGGCGAGCAGTGCGGCGCAAGGAGTCGGAGG +
Preference number: 6 (lower is better)
Translates to: GSGAELHDPFPD*PGEQCGARSRR
Trigger: CCTCCGACTCCTTGCGCCGCACTGCTCGCCGGGCCAGTCCGGAAACGGGTCGTGGAGCTCCGCACCACTCCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000250457.9
ENST00000547327.2
CDS CCA 72 bp TCGCAGCCCTCCTCGTTGCCCCCGATCCACGTGATCTaGTCGCCCCGCAGGTGTCGCTTGGAGACGCCGGCG +
Preference number: 6 (lower is better)
Translates to: SQPSSLPPIHVI*SPRRCRLETPA
Trigger: CGCCGGCGTCTCCAAGCGACACCTGCGGGGCGACCAGATCACGTGGATCGGGGGCAACGAGGAGGGCTGCGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000250457.9
ENST00000547327.2
CDS TCA 72 bp TGGCCTCGCAGCCCTCCTCGTTGCCCCCGATCCACGTaGTCTGGTCGCCCCGCAGGTGTCGCTTGGAGACGC +
Preference number: 6 (lower is better)
Translates to: WPRSPPRCPRST*SGRPAGVAWRR
Trigger: GCGTCTCCAAGCGACACCTGCGGGGCGACCAGATCACGTGGATCGGGGGCAACGAGGAGGGCTGCGAGGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000250457.9
ENST00000547327.2
CDS GCA 72 bp CTCCACGACCCGTTTCCGGACTGGCCCGGCGAGCAGTaGGGCGCAAGGAGTCGGAGGGCGCCTTTTGGGGAT +
Preference number: 6 (lower is better)
Translates to: LHDPFPDWPGEQ*GARSRRAPFGD
Trigger: ATCCCCAAAAGGCGCCCTCCGACTCCTTGCGCCGCACTGCTCGCCGGGCCAGTCCGGAAACGGGTCGTGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000250457.9
ENST00000547327.2
CDS CCA 72 bp GTGCGGCGCAAGGAGTCGGAGGGCGCCTTTTGGGGATaGGAAGCCACCACTGCCGCGACTGCGGCCAGACTC +
Preference number: 6 (lower is better)
Translates to: VRRKESEGAFWG*EATTAATAARL
Trigger: GAGTCTGGCCGCAGTCGCGGCAGTGGTGGCTTCCCATCCCCAAAAGGCGCCCTCCGACTCCTTGCGCCGCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547327.2
CDS GCA 72 bp CCAGGCCCTGACACGTTCAGGCTGCCTCCTGGTAGCTaGTTGTGCAGCTGGCGGCCTAGCTGGGAGACAAGC +
Preference number: 6 (lower is better)
Translates to: PGPDTFRLPPGS*LCSWRPSWETS
Trigger: GCTTGTCTCCCAGCTAGGCCGCCAGCTGCACAAGCAGCTACCAGGAGGCAGCCTGAACGTGTCAGGGCCTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551935.5
CDS GCA 72 bp GGCAAGTGTCGTGCCCAGGCCCTGACACGTTCAGGCTaGCTCCTGGTAGCTGCTTGTGCAGCTGGCGGCCTA +
Preference number: 6 (lower is better)
Translates to: GKCRAQALTRSG*LLVAACAAGGL
Trigger: TAGGCCGCCAGCTGCACAAGCAGCTACCAGGAGGCAGCCTGAACGTGTCAGGGCCTGGGCACGACACTTGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551935.5
CDS CAA 72 bp GGCCCTGACACGTTCAGGCTGCCTCCTGGTAGCTGCTaGTGCAGCTGGCGGCCTAGCTGGGAGACAAGCATT +
Preference number: 6 (lower is better)
Translates to: GPDTFRLPPGSC*CSWRPSWETSI
Trigger: AATGCTTGTCTCCCAGCTAGGCCGCCAGCTGCACAAGCAGCTACCAGGAGGCAGCCTGAACGTGTCAGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551935.5
CDS GCA 72 bp TTCAGAAACCTGCGGCTGCCACGGTACCCGAGCCGCTaGAGCGTCGGGGACAAGGGAAAGTTTCTCGCAACT +
Preference number: 6 (lower is better)
Translates to: FRNLRLPRYPSR*SVGDKGKFLAT
Trigger: AGTTGCGAGAAACTTTCCCTTGTCCCCGACGCTGCAGCGGCTCGGGTACCGTGGCAGCCGCAGGTTTCTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000250457.9
ENST00000547327.2
CDS GCA 72 bp GGCAAGTGTCGTGCCCAGGCCCTGACACGTTCAGGCTaGCTCCTGGTAGCTGTTTGGCCTTTGCTGTACCAC +
Preference number: 6 (lower is better)
Translates to: GKCRAQALTRSG*LLVAVWPLLYH
Trigger: GTGGTACAGCAAAGGCCAAACAGCTACCAGGAGGCAGCCTGAACGTGTCAGGGCCTGGGCACGACACTTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000464521.6
CDS CCA 72 bp TGCCATGTGGGCCCCTCCATAGGGCTACTCACAACATaGCAGCTGGCTGTTGCCTGCTGGCTGCCCTCAGTT +
Preference number: 6 (lower is better)
Translates to: CHVGPSIGLLTT*QLAVACWLPSV
Trigger: AACTGAGGGCAGCCAGCAGGCAACAGCCAGCTGCCATGTTGTGAGTAGCCCTATGGAGGGGCCCACATGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000550114.5
ENST00000551935.5
CDS CAA 90 bp TCGTGCCCAGGCCCTGACACGTTCAGGCTGCCTCCTGGTAGCTGCTaGTGCAGCTGGCGGCCTAGCTGGGAGACAAGCATTAATCAAGTC +
Preference number: 6 (lower is better)
Translates to: SCPGPDTFRLPPGSC*CSWRPSWETSINQV
Trigger: GACTTGATTAATGCTTGTCTCCCAGCTAGGCCGCCAGCTGCACAAGCAGCTACCAGGAGGCAGCCTGAACGTGTCAGGGCCTGGGCACGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551935.5
CDS GCA 72 bp GGCTTCAAATCACTCCTCCAAGAAAGGCAAGTGTCGTaGCCAGGCCCTGACACGTTCAGGCTGCCTCCTGGT +
Preference number: 6 (lower is better)
Translates to: GFKSLLQERQVS*PGPDTFRLPPG
Trigger: ACCAGGAGGCAGCCTGAACGTGTCAGGGCCTGGGCACGACACTTGCCTTTCTTGGAGGAGTGATTTGAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000464521.6
ENST00000487915.6
ENST00000546681.5
ENST00000548285.5
ENST00000551935.5
CDS GCA 72 bp AGCATAGGAGAGGTGGAGTCCTTCAGTTCAGAGAAATaGCCCTTCCATGGGCCACAGGAGGATCCCCCAGCC +
Preference number: 6 (lower is better)
Translates to: SIGEVESFSSEK*PFHGPQEDPPA
Trigger: GGCTGGGGGATCCTCCTGTGGCCCATGGAAGGGGCATTTCTCTGAACTGAAGGACTCCACCTCTCCTATGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000546681.5
CDS GCA 72 bp CCTGACACGTTCAGGCTGCCTCCTGGTAGCTGCTTGTaGAGCTGGCGGCCTAGCTGGGAGACAAGCATTAAT +
Preference number: 6 (lower is better)
Translates to: PDTFRLPPGSCL*SWRPSWETSIN
Trigger: ATTAATGCTTGTCTCCCAGCTAGGCCGCCAGCTGCACAAGCAGCTACCAGGAGGCAGCCTGAACGTGTCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551935.5
CDS GCA 72 bp GGCAAGTGTCGTGCCCAGGCCCTGACACGTTCAGGCTaGCTCCTGGTAGCTGAGAAACCAGAAGTAGTTTCC +
Preference number: 6 (lower is better)
Translates to: GKCRAQALTRSG*LLVAEKPEVVS
Trigger: GGAAACTACTTCTGGTTTCTCAGCTACCAGGAGGCAGCCTGAACGTGTCAGGGCCTGGGCACGACACTTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548285.5
CDS CCA 72 bp GGTGTCAGCCAGACTGCAGTCATCTCAAGGCTCCACTaGGGGAAGATCTGCTTCCAAGCTCCCTCATGTGGC +
Preference number: 6 (lower is better)
Translates to: GVSQTAVISRLH*GKICFQAPSCG
Trigger: GCCACATGAGGGAGCTTGGAAGCAGATCTTCCCCCAGTGGAGCCTTGAGATGACTGCAGTCTGGCTGACACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550114.5
CDS GCA 72 bp GGCAAGTGTCGTGCCCAGGCCCTGACACGTTCAGGCTaGCTCCTGGTAGCTGCAACTTTCCTAATAAGAGCA +
Preference number: 6 (lower is better)
Translates to: GKCRAQALTRSG*LLVAATFLIRA
Trigger: TGCTCTTATTAGGAAAGTTGCAGCTACCAGGAGGCAGCCTGAACGTGTCAGGGCCTGGGCACGACACTTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487915.6
CDS GCA 72 bp GGCCACCATTTCCACGCTGCCCTCAGCACATTCTGTTaGCCTAGCCTAGCCATTACAATTGCCCAGTGGCCT +
Preference number: 6 (lower is better)
Translates to: GHHFHAALSTFC*PSLAITIAQWP
Trigger: AGGCCACTGGGCAATTGTAATGGCTAGGCTAGGGCAACAGAATGTGCTGAGGGCAGCGTGGAAATGGTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557521.1
CDS CCA 72 bp ACGTTCAGGCTGCCTCCTGGTAGCTGCTTGTGCAGCTaGCGGCCTAGCTGGGAGACAAGCATTAATCAAGTC +
Preference number: 6 (lower is better)
Translates to: TFRLPPGSCLCS*RPSWETSINQV
Trigger: GACTTGATTAATGCTTGTCTCCCAGCTAGGCCGCCAGCTGCACAAGCAGCTACCAGGAGGCAGCCTGAACGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551935.5
CDS CCA 72 bp CCATTGCCATCTTTCTGCTCTGCCACCCTCAGTCATTaGCTCCATTCTCAGGCTGCGCATGGCAAGATGGCT +
Preference number: 6 (lower is better)
Translates to: PLPSFCSATLSH*LHSQAAHGKMA
Trigger: AGCCATCTTGCCATGCGCAGCCTGAGAATGGAGCCAATGACTGAGGGTGGCAGAGCAGAAAGATGGCAATGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487915.6
CDS CCA 72 bp CCTCCTGGTAGCTGCTTGTGCAGCTGGCGGCCTAGCTaGGAGACAAGCATTAATCAAGTCGTGATCCGTGTA +
Preference number: 6 (lower is better)
Translates to: PPGSCLCSWRPS*ETSINQVVIRV
Trigger: TACACGGATCACGACTTGATTAATGCTTGTCTCCCAGCTAGGCCGCCAGCTGCACAAGCAGCTACCAGGAGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551935.5
CDS GCA 72 bp CTCTGCCACCCTCAGTCATTGGCTCCATTCTCAGGCTaGGCATGGCAAGATGGCTTTGGACATAACAACACC +
Preference number: 6 (lower is better)
Translates to: LCHPQSLAPFSG*AWQDGFGHNNT
Trigger: GGTGTTGTTATGTCCAAAGCCATCTTGCCATGCGCAGCCTGAGAATGGAGCCAATGACTGAGGGTGGCAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000487915.6
ENST00000548285.5
ENST00000551935.5
CDS TCA 72 bp CAACGAGTACAGGTCTTGGTGCCCAAGGCCATGTGCTaGAGCTGGAATTTGGTTCTCATACACCCTCTCCTC +
Preference number: 6 (lower is better)
Translates to: QRVQVLVPKAMC*SWNLVLIHPLL
Trigger: GAGGAGAGGGTGTATGAGAACCAAATTCCAGCTTCAGCACATGGCCTTGGGCACCAAGACCTGTACTCGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546681.5
CDS CAA 90 bp CCAGCGTGTCTTCATCTCCATGGCAGAACCTTCTCAGGGCAGGCATaGGAAGTACCAGCAAGCTTGACTGCATATCACCACCGTCTGTTT +
Preference number: 6 (lower is better)
Translates to: PACLHLHGRTFSGQA*EVPASLTAYHHRLF
Trigger: AAACAGACGGTGGTGATATGCAGTCAAGCTTGCTGGTACTTCCAATGCCTGCCCTGAGAAGGTTCTGCCATGGAGATGAAGACACGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487915.6
CDS CAA 90 bp CTCGCCACAGGTCCCCCTCCACAGAGCAGCTCACAACATGGCATCTaGCCTAGTTGTGTCCTTAAAAGGAAAGTTATGTGCTCTCCTTGC +
Preference number: 6 (lower is better)
Translates to: LATGPPPQSSSQHGI*PSCVLKRKVMCSPC
Trigger: GCAAGGAGAGCACATAACTTTCCTTTTAAGGACACAACTAGGCAAGATGCCATGTTGTGAGCTGCTCTGTGGAGGGGGACCTGTGGCGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550114.5
CDS CAA 90 bp CCTCGTACCATTTATCTCATCTTTCTGCTCTGCCACCCTCAGTCATaGGCTCCATTCTCAGGCTGCGCATGGCAAGATGGCTTTGGACAT +
Preference number: 6 (lower is better)
Translates to: PRTIYLIFLLCHPQS*APFSGCAWQDGFGH
Trigger: ATGTCCAAAGCCATCTTGCCATGCGCAGCCTGAGAATGGAGCCAATGACTGAGGGTGGCAGAGCAGAAAGATGAGATAAATGGTACGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551935.5
CDS TCA 72 bp GTAAGAGGGCTGCACTTCGTGTGGGTTCCTACGATCTaGCCAGAAGAACAGGAGTCTGTCAAAAATGGGCTC +
Preference number: 6 (lower is better)
Translates to: VRGLHFVWVPTI*PEEQESVKNGL
Trigger: GAGCCCATTTTTGACAGACTCCTGTTCTTCTGGTCAGATCGTAGGAACCCACACGAAGTGCAGCCCTCTTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000250457.9
ENST00000553215.5
ENST00000556785.1
CDS TCA 72 bp AAACGAGTGGGTGTATCCAGCCCACCTCTTCCTAGATaGAAGCTGCAGAAACCAGAAGTAGTTTCCCCTGGC +
Preference number: 6 (lower is better)
Translates to: KRVGVSSPPLPR*KLQKPEVVSPG
Trigger: GCCAGGGGAAACTACTTCTGGTTTCTGCAGCTTTCATCTAGGAAGAGGTGGGCTGGATACACCCACTCGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487915.6
CDS TCA 72 bp CTGGTAGCTGAGAAACCAGAAGTAGTTTCCCCTGGCTaGTCTTTGAGGGTGTCCCCTTTAAACTTGCCAGCC +
Preference number: 6 (lower is better)
Translates to: LVAEKPEVVSPG*SLRVSPLNLPA
Trigger: GGCTGGCAAGTTTAAAGGGGACACCCTCAAAGATCAGCCAGGGGAAACTACTTCTGGTTTCTCAGCTACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548285.5
CDS CCA 72 bp TTAAAGCTGCTCCTTCTGGAGATGGTGGGAAACGAGTaGGTGTATCCAGCCCACCTCTTCCTAGATGAAAGC +
Preference number: 6 (lower is better)
Translates to: LKLLLLEMVGNE*VYPAHLFLDES
Trigger: GCTTTCATCTAGGAAGAGGTGGGCTGGATACACCCACTCGTTTCCCACCATCTCCAGAAGGAGCAGCTTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487915.6
CDS CCA 72 bp CACCCTCAGTCATTGGCTCCATTCTCAGGCTGCGCATaGCAAGATGGCTTTGGACATAACAACACCTTTCTC +
Preference number: 6 (lower is better)
Translates to: HPQSLAPFSGCA*QDGFGHNNTFL
Trigger: GAGAAAGGTGTTGTTATGTCCAAAGCCATCTTGCCATGCGCAGCCTGAGAATGGAGCCAATGACTGAGGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000487915.6
ENST00000551935.5
CDS CCA 72 bp GTGTTGTCCATCATAGTCTCCAACGAGTACAGGTCTTaGTGCCCAAGGCCATGTGCTGAAGCTGGAATTTGG +
Preference number: 6 (lower is better)
Translates to: VLSIIVSNEYRS*CPRPCAEAGIW
Trigger: CCAAATTCCAGCTTCAGCACATGGCCTTGGGCACCAAGACCTGTACTCGTTGGAGACTATGATGGACAACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546681.5
CDS CCA 72 bp TTTATCTCATCTTTCTGCTCTGCCACCCTCAGTCATTaGCTCCATTCTCAGGCTGCGCATGGCAAGATGGCT +
Preference number: 6 (lower is better)
Translates to: FISSFCSATLSH*LHSQAAHGKMA
Trigger: AGCCATCTTGCCATGCGCAGCCTGAGAATGGAGCCAATGACTGAGGGTGGCAGAGCAGAAAGATGAGATAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551935.5
CDS CCA 72 bp CACCCTCAGTCATTGGCTCCATTCTCAGGCTGCGCATaGCAAGATGGCTTTGGACATAACAACACCCTTTTG +
Preference number: 6 (lower is better)
Translates to: HPQSLAPFSGCA*QDGFGHNNTLL
Trigger: CAAAAGGGTGTTGTTATGTCCAAAGCCATCTTGCCATGCGCAGCCTGAGAATGGAGCCAATGACTGAGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548285.5
CDS CAA 72 bp TGGCTCCATTCTCAGGCTGCGCATGGCAAGATGGCTTaGGACATAACAACACCTTTCTCCTGGGGCTTGTTT +
Preference number: 6 (lower is better)
Translates to: WLHSQAAHGKMA*DITTPFSWGLF
Trigger: AAACAAGCCCCAGGAGAAAGGTGTTGTTATGTCCAAAGCCATCTTGCCATGCGCAGCCTGAGAATGGAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487915.6
ENST00000551935.5
CDS GCA 72 bp TTGTCCATCATAGTCTCCAACGAGTACAGGTCTTGGTaGCCAAGGCCATGTGCTGAAGCTGGAATTTGGTTC +
Preference number: 6 (lower is better)
Translates to: LSIIVSNEYRSW*PRPCAEAGIWF
Trigger: GAACCAAATTCCAGCTTCAGCACATGGCCTTGGGCACCAAGACCTGTACTCGTTGGAGACTATGATGGACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000546681.5
CDS GCA 72 bp GGAGCTGGGAGTAGCAACCTGGTAGTCAGTGATGGATaGTCCCATATCAGCCTCGTACCATTTATCTCTTCT +
Preference number: 6 (lower is better)
Translates to: GAGSSNLVVSDG*SHISLVPFISS
Trigger: AGAAGAGATAAATGGTACGAGGCTGATATGGGAGCATCCATCACTGACTACCAGGTTGCTACTCCCAGCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550114.5
CDS GCA 72 bp GGAGCTGGGAGTAGCAACCTGGTAGTCAGTGATGGATaGTCCCATATCAGCCTCGTACCATTTATCTCATCT +
Preference number: 6 (lower is better)
Translates to: GAGSSNLVVSDG*SHISLVPFISS
Trigger: AGATGAGATAAATGGTACGAGGCTGATATGGGAGCATCCATCACTGACTACCAGGTTGCTACTCCCAGCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551935.5
CDS CCA 72 bp TCTTGGTGCCCAAGGCCATGTGCTGAAGCTGGAATTTaGTTCTCATACACCCTCTCCTCTGTGAGCAAAATG +
Preference number: 6 (lower is better)
Translates to: SWCPRPCAEAGI*FSYTLSSVSKM
Trigger: CATTTTGCTCACAGAGGAGAGGGTGTATGAGAACCAAATTCCAGCTTCAGCACATGGCCTTGGGCACCAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546681.5
CDS CCA 72 bp CGCCACAGGTCCCCCTCCACAGAGCAGCTCACAACATaGCATCTAGTTGTGTCCTTAAAAGGAAAGTTATGT +
Preference number: 6 (lower is better)
Translates to: RHRSPSTEQLTT*HLVVSLKGKLC
Trigger: ACATAACTTTCCTTTTAAGGACACAACTAGATGCCATGTTGTGAGCTGCTCTGTGGAGGGGGACCTGTGGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000551935.5
CDS CAA 72 bp GGTCCCCCTCCACAGAGCAGCTCACAACATGGCATCTaGCCTAGTTGTGTCCTTAAAAGGAAAGTTATGTGC +
Preference number: 6 (lower is better)
Translates to: GPPPQSSSQHGI*PSCVLKRKVMC
Trigger: GCACATAACTTTCCTTTTAAGGACACAACTAGGCAAGATGCCATGTTGTGAGCTGCTCTGTGGAGGGGGACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550114.5
CDS CAA 90 bp CTCAGTCATTGGCTCCATTCTCAGGCTGCGCATGGCAAGATGGCTTaGGACATAACAACACCTTTCTCCTGGGGCTTGTTTTGTATCTGT +
Preference number: 6 (lower is better)
Translates to: LSHWLHSQAAHGKMA*DITTPFSWGLFCIC
Trigger: ACAGATACAAAACAAGCCCCAGGAGAAAGGTGTTGTTATGTCCAAAGCCATCTTGCCATGCGCAGCCTGAGAATGGAGCCAATGACTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487915.6
ENST00000551935.5
CDS GCA 72 bp TCCCATATCAGCCTCGTACCATTTATCTCATCTTTCTaGTCTGCCACCCTCAGTCATTGGCTCCATTCTCAG +
Preference number: 6 (lower is better)
Translates to: SHISLVPFISSF*SATLSHWLHSQ
Trigger: CTGAGAATGGAGCCAATGACTGAGGGTGGCAGAGCAGAAAGATGAGATAAATGGTACGAGGCTGATATGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551935.5
CDS CCA 72 bp TTCTGTTGCCCTAGCCTAGCCATTACAATTGCCCAGTaGCCTTTCTTGGGCTACAGATCTTTGCTTTGTTCA +
Preference number: 6 (lower is better)
Translates to: FCCPSLAITIAQ*PFLGYRSLLCS
Trigger: TGAACAAAGCAAAGATCTGTAGCCCAAGAAAGGCCACTGGGCAATTGTAATGGCTAGGCTAGGGCAACAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557521.1
CDS GCA 72 bp CAATTGCCCAGTGGCCTTTCTTGGGCTACAGATCTTTaGTTTGTTCAACTGAGGAAAGCAGAGACATTCAGT +
Preference number: 6 (lower is better)
Translates to: QLPSGLSWATDL*FVQLRKAETFS
Trigger: ACTGAATGTCTCTGCTTTCCTCAGTTGAACAAAGCAAAGATCTGTAGCCCAAGAAAGGCCACTGGGCAATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557521.1
CDS CCA 72 bp GGCAAGATGGCTTTGGACATAACAACACCTTTCTCCTaGGGCTTGTTTTGTATCTGTCCATTAAGAGTGTCC +
Preference number: 6 (lower is better)
Translates to: GKMALDITTPFS*GLFCICPLRVS
Trigger: GGACACTCTTAATGGACAGATACAAAACAAGCCCCAGGAGAAAGGTGTTGTTATGTCCAAAGCCATCTTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487915.6
ENST00000551935.5
CDS CCA 72 bp GAGGGCAGATTTAAAATGGTTGATACACCTTTCTCCTaGGGCTTGTTTTGTATCTGTCCATTAAGAGTGTCC +
Preference number: 6 (lower is better)
Translates to: EGRFKMVDTPFS*GLFCICPLRVS
Trigger: GGACACTCTTAATGGACAGATACAAAACAAGCCCCAGGAGAAAGGTGTATCAACCATTTTAAATCTGCCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000464521.6
ENST00000546681.5
ENST00000548285.5
CDS CAA 72 bp TTTGGACATAACAACACCTTTCTCCTGGGGCTTGTTTaGTATCTGTCCATTAAGAGTGTCCTCGTTCATTTT +
Preference number: 6 (lower is better)
Translates to: FGHNNTFLLGLV*YLSIKSVLVHF
Trigger: AAAATGAACGAGGACACTCTTAATGGACAGATACAAAACAAGCCCCAGGAGAAAGGTGTTGTTATGTCCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487915.6
ENST00000551935.5