RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EGFR (Homo sapiens)

Ensembl gene IDs: ENSG00000146648

Ensembl transcript IDs: ENST00000275493.7, ENST00000342916.7, ENST00000344576.6, ENST00000344576.7, ENST00000420316.6, ENST00000450046.1, ENST00000454757.6, ENST00000455089.5, ENST00000459688.1, ENST00000463948.1, ENST00000485503.1

Found 1144 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCGGTCAGGGTGCCCCTGATGCACCTGCACTTTCCACCTCCCCGCTaGCTGAGACCTGGTCATCCTCCTGTGAGGCCTCCCTTCCAGGTC +
Preference number: 1 (lower is better)
Translates to: SVRVPLMHLHFPPPR*LRPGHPPVRPPFQV
Trigger: GACCTGGAAGGGAGGCCTCACAGGAGGATGACCAGGTCTCAGTCAGCGGGGAGGTGGAAAGTGCAGGTGCATCAGGGGCACCCTGACCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR CCA 90 bp GCCCCTGATGCACCTGCACTTTCCACCTCCCCGCTGACTGAGACCTaGTCATCCTCCTGTGAGGCCTCCCTTCCAGGTCTCCTCAGGCAG +
Preference number: 1 (lower is better)
Translates to: APDAPALSTSPLTET*SSSCEASLPGLLRQ
Trigger: CTGCCTGAGGAGACCTGGAAGGGAGGCCTCACAGGAGGATGACCAGGTCTCAGTCAGCGGGGAGGTGGAAAGTGCAGGTGCATCAGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR TCA 90 bp CTGGCAGCATGGAGTCCCTGCAGGTTTCTGACAAATTCTGTGCTTTaGACAATCATCTGGCAGCGAGGAGGAAGAGGTCAGTCCTGGGGG +
Preference number: 1 (lower is better)
Translates to: LAAWSPCRFLTNSVL*TIIWQRGGRGQSWG
Trigger: CCCCCAGGACTGACCTCTTCCTCCTCGCTGCCAGATGATTGTTCAAAGCACAGAATTTGTCAGAAACCTGCAGGGACTCCATGCTGCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344576.6
3UTR CCA 90 bp TGCGGGCATGGCTGTTGGGATGGAGGACCTGCTGTGGCTTGGTCCTaGGTATCGAAAGAGTCTGGATTTTTAGGGCTCATACTATCCTCC +
Preference number: 1 (lower is better)
Translates to: CGHGCWDGGPAVAWS*VSKESGFLGLILSS
Trigger: GGAGGATAGTATGAGCCCTAAAAATCCAGACTCTTTCGATACCCAGGACCAAGCCACAGCAGGTCCTCCATCCCAACAGCCATGCCCGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
3UTR CCA 90 bp TGCAGTGGAAGCCTTGAAGCAGAACCACTGGAATCAAGCATCCTCTaGAAGACTTGTGGCTTGTGCTCCTTGCTCACAGTTGGGCCTGGA +
Preference number: 1 (lower is better)
Translates to: CSGSLEAEPLESSIL*KTCGLCSLLTVGPG
Trigger: TCCAGGCCCAACTGTGAGCAAGGAGCACAAGCCACAAGTCTTCCAGAGGATGCTTGATTCCAGTGGTTCTGCTTCAAGGCTTCCACTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
3UTR CCA 90 bp GCTGCAACTTTTAGGGAACTTGTGGGATGCTCCAAGCTCATCCCCTaGCTTAGAGGGAGCAGGTTGTTTAGGGTGACTGACCTCAGCCTT +
Preference number: 1 (lower is better)
Translates to: AATFRELVGCSKLIP*LRGSRLFRVTDLSL
Trigger: AAGGCTGAGGTCAGTCACCCTAAACAACCTGCTCCCTCTAAGCCAGGGGATGAGCTTGGAGCATCCCACAAGTTCCCTAAAAGTTGCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR CCA 90 bp ATTTCAAACAGAGGGGCAGAAGGAACCAAGGCTAGAAGCATGGACTaGGGCCATGCTAATTACGGAGAAGGCTGGCAGCATGGAGTCCCT +
Preference number: 1 (lower is better)
Translates to: ISNRGAEGTKARSMD*GHANYGEGWQHGVP
Trigger: AGGGACTCCATGCTGCCAGCCTTCTCCGTAATTAGCATGGCCCCAGTCCATGCTTCTAGCCTTGGTTCCTTCTGCCCCTCTGTTTGAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344576.6
3UTR TCA 90 bp ATCAGGAAGACCTTCAGGGATGGAGTCCAAGCTTTGAGTACTGACTaGTCAGGGCTGTTAGGTGAAAATCATGGGACTTTGGGCAGCTCC +
Preference number: 1 (lower is better)
Translates to: IRKTFRDGVQALSTD*SGLLGENHGTLGSS
Trigger: GGAGCTGCCCAAAGTCCCATGATTTTCACCTAACAGCCCTGATCAGTCAGTACTCAAAGCTTGGACTCCATCCCTGAAGGTCTTCCTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR TCA 90 bp GGTTCTAGAAACTTTGATGAATGTTGCAATAACCAGGGGGTGCTCTaGAAAGGCCCTACGGCTGGGCTGCACCTGAGAAAATCAAGCCAC +
Preference number: 1 (lower is better)
Translates to: GSRNFDECCNNQGVL*KGPTAGLHLRKSSH
Trigger: GTGGCTTGATTTTCTCAGGTGCAGCCCAGCCGTAGGGCCTTTTCAGAGCACCCCCTGGTTATTGCAACATTCATCAAAGTTTCTAGAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR GCA 90 bp AGCAAACACCTAAGCTTTGGTGTCATCAGCTGGAGTGCAATAGGATaGATCCACAGTGCTCCCCCTTACAACCTGGACTCACAGCGAATA +
Preference number: 1 (lower is better)
Translates to: SKHLSFGVISWSAIG*IHSAPPYNLDSQRI
Trigger: TATTCGCTGTGAGTCCAGGTTGTAAGGGGGAGCACTGTGGATGCATCCTATTGCACTCCAGCTGATGACACCAAAGCTTAGGTGTTTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR GCA 90 bp AAGAACTTTCAGCAAACACCTAAGCTTTGGTGTCATCAGCTGGAGTaGAATAGGATGCATCCACAGTGCTCCCCCTTACAACCTGGACTC +
Preference number: 1 (lower is better)
Translates to: KNFQQTPKLWCHQLE*NRMHPQCSPLQPGL
Trigger: GAGTCCAGGTTGTAAGGGGGAGCACTGTGGATGCATCCTATTGCACTCCAGCTGATGACACCAAAGCTTAGGTGTTTGCTGAAAGTTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR CCA 90 bp AAGGAATGCAACTTCCCAAAATGTGCCCGAGGTGGAAGTACTTCCTaGCTAGTCGGTGTAAACGTTGCAAAACCAGTCTGTGGGTCTAAG +
Preference number: 1 (lower is better)
Translates to: KECNFPKCARGGSTS*LVGVNVAKPVCGSK
Trigger: CTTAGACCCACAGACTGGTTTTGCAACGTTTACACCGACTAGCCAGGAAGTACTTCCACCTCGGGCACATTTTGGGAAGTTGCATTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
3UTR TCA 90 bp GCCTTTCCTGCTAAGCAATCCATAGTCCCCTTATGTCTGCAGTTGTaGGGCAGGGGTGGTAAGTCACAACATCAAGAACTTTCAGCAAAC +
Preference number: 1 (lower is better)
Translates to: AFPAKQSIVPLCLQL*GRGGKSQHQELSAN
Trigger: GTTTGCTGAAAGTTCTTGATGTTGTGACTTACCACCCCTGCCTCACAACTGCAGACATAAGGGGACTATGGATTGCTTAGCAGGAAAGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR GCA 90 bp AAGCTTTGGTGTCATCAGCTGGAGTGCAATAGGATGCATCCACAGTaGTCCCCCTTACAACCTGGACTCACAGCGAATATAGAGTTTAGA +
Preference number: 1 (lower is better)
Translates to: KLWCHQLECNRMHPQ*SPLQPGLTANIEFR
Trigger: TCTAAACTCTATATTCGCTGTGAGTCCAGGTTGTAAGGGGGAGCACTGTGGATGCATCCTATTGCACTCCAGCTGATGACACCAAAGCTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR CCA 90 bp AAACAATGGAATGGAAGACAAACAAGTCAGTCTAACGCTCATGACTaGAAACCACTGGTCCATCAGTGGGGAGTAAGTACCGTGGGGACA +
Preference number: 1 (lower is better)
Translates to: KQWNGRQTSQSNAHD*KPLVHQWGVSTVGT
Trigger: TGTCCCCACGGTACTTACTCCCCACTGATGGACCAGTGGTTTCCAGTCATGAGCGTTAGACTGACTTGTTTGTCTTCCATTCCATTGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
3UTR CCA 90 bp ACATCAAGAACTTTCAGCAAACACCTAAGCTTTGGTGTCATCAGCTaGAGTGCAATAGGATGCATCCACAGTGCTCCCCCTTACAACCTG +
Preference number: 1 (lower is better)
Translates to: TSRTFSKHLSFGVIS*SAIGCIHSAPPYNL
Trigger: CAGGTTGTAAGGGGGAGCACTGTGGATGCATCCTATTGCACTCCAGCTGATGACACCAAAGCTTAGGTGTTTGCTGAAAGTTCTTGATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR TCA 90 bp TTCGCACCTGTAAAATGCCCTGTTGTGGCCAGAGCTGTAAGTGCTTaGATAGATGACTCAAGGCAGAGACACTTTTTGTGTGACAAAGCG +
Preference number: 1 (lower is better)
Translates to: FAPVKCPVVARAVSA*IDDSRQRHFLCDKA
Trigger: CGCTTTGTCACACAAAAAGTGTCTCTGCCTTGAGTCATCTATTCAAGCACTTACAGCTCTGGCCACAACAGGGCATTTTACAGGTGCGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
3UTR GCA 90 bp AATGCTTCACAGTTTGAAGACAAAGGAATGCAACTTCCCAAAATGTaGCCGAGGTGGAAGTACTTCCTGGCTAGTCGGTGTAAACGTTGC +
Preference number: 1 (lower is better)
Translates to: NASQFEDKGMQLPKM*PRWKYFLASRCKRC
Trigger: GCAACGTTTACACCGACTAGCCAGGAAGTACTTCCACCTCGGGCACATTTTGGGAAGTTGCATTCCTTTGTCTTCAAACTGTGAAGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
3UTR GCA 90 bp TCACAAAGGAGGGAAGAGACTGGTTTCTATAACTTACTTAGAGAATaGAGAGGGTCCCAGGGCGTTTTCAAAGCTCAGGTGGGGGTATTT +
Preference number: 1 (lower is better)
Translates to: SQRREETGFYNLLRE*RGSQGVFKAQVGVF
Trigger: AAATACCCCCACCTGAGCTTTGAAAACGCCCTGGGACCCTCTGCATTCTCTAAGTAAGTTATAGAAACCAGTCTCTTCCCTCCTTTGTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR CCA 90 bp CAGTTTGAAGACAAAGGAATGCAACTTCCCAAAATGTGCCCGAGGTaGAAGTACTTCCTGGCTAGTCGGTGTAAACGTTGCAAAACCAGT +
Preference number: 1 (lower is better)
Translates to: QFEDKGMQLPKMCPR*KYFLASRCKRCKTS
Trigger: ACTGGTTTTGCAACGTTTACACCGACTAGCCAGGAAGTACTTCCACCTCGGGCACATTTTGGGAAGTTGCATTCCTTTGTCTTCAAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
3UTR CCA 90 bp AGGCTAAGGGCTTTGCGGCTTCTACCAGACAGAACTGTGCCTCCCTaGACAGATGAAGTGAGAACTATTTTGGGAAGCACAATCTTAAAA +
Preference number: 1 (lower is better)
Translates to: RLRALRLLPDRTVPP*TDEVRTILGSTILK
Trigger: TTTTAAGATTGTGCTTCCCAAAATAGTTCTCACTTCATCTGTCCAGGGAGGCACAGTTCTGTCTGGTAGAAGCCGCAAAGCCCTTAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR CCA 90 bp GTGGTAAGTCACAACATCAAGAACTTTCAGCAAACACCTAAGCTTTaGTGTCATCAGCTGGAGTGCAATAGGATGCATCCACAGTGCTCC +
Preference number: 1 (lower is better)
Translates to: VVSHNIKNFQQTPKL*CHQLECNRMHPQCS
Trigger: GGAGCACTGTGGATGCATCCTATTGCACTCCAGCTGATGACACCAAAGCTTAGGTGTTTGCTGAAAGTTCTTGATGTTGTGACTTACCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR CCA 90 bp CTTCATGGAAACTCTGTTCAGGTTCTTGACTCTCAGCGACAGATGTaGAGGTCTTTGTGTCTTAGCTCTCTAGGCCTGAGAATCACATAC +
Preference number: 1 (lower is better)
Translates to: LHGNSVQVLDSQRQM*RSLCLSSLGLRITY
Trigger: GTATGTGATTCTCAGGCCTAGAGAGCTAAGACACAAAGACCTCCACATCTGTCGCTGAGAGTCAAGAACCTGAACAGAGTTTCCATGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR GCA 90 bp AGAAAGAAATGCAGAGTAGACATTGAGGGCAATTTCAACAGGTGTTaGCTACGTGGAATAGCAGCTCACTCACAAAGGAGGGAAGAGACT +
Preference number: 1 (lower is better)
Translates to: RKKCRVDIEGNFNRC*LRGIAAHSQRREET
Trigger: AGTCTCTTCCCTCCTTTGTGAGTGAGCTGCTATTCCACGTAGGCAACACCTGTTGAAATTGCCCTCAATGTCTACTCTGCATTTCTTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR CCA 90 bp AGAACAAAAGCGGTGCTATCCTTAGGTATTCCACATTCTCAGCTGTaGGCTATTGGTCCAAATGCTGATGAATCCAATGTGGGCTGGAAT +
Preference number: 1 (lower is better)
Translates to: RTKAVLSLGIPHSQL*AIGPNADESNVGWN
Trigger: ATTCCAGCCCACATTGGATTCATCAGCATTTGGACCAATAGCCCACAGCTGAGAATGTGGAATACCTAAGGATAGCACCGCTTTTGTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
3UTR CCA 90 bp CCTTTGCTTTTCAACCATTGTTTAGACACTCTCCCTTCTAGTGCTTaGAGAACCTTCATGGAAACTCTGTTCAGGTTCTTGACTCTCAGC +
Preference number: 1 (lower is better)
Translates to: PLLFNHCLDTLPSSA*RTFMETLFRFLTLS
Trigger: GCTGAGAGTCAAGAACCTGAACAGAGTTTCCATGAAGGTTCTCCAAGCACTAGAAGGGAGAGTGTCTAAACAATGGTTGAAAAGCAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR TCA 90 bp GGACAATATTCTTGCTGGATGCGTTTCTGTAAATGCTTCACAGTTTaGAGACAAAGGAATGCAACTTCCCAAAATGTGCCCGAGGTGGAA +
Preference number: 1 (lower is better)
Translates to: GQYSCWMRFCKCFTV*RQRNATSQNVPEVE
Trigger: TTCCACCTCGGGCACATTTTGGGAAGTTGCATTCCTTTGTCTTCAAACTGTGAAGCATTTACAGAAACGCATCCAGCAAGAATATTGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
3UTR TCA 90 bp GGCTTTGCGGCTTCTACCAGACAGAACTGTGCCTCCCTGGACAGATaGAGTGAGAACTATTTTGGGAAGCACAATCTTAAAATTAATAGA +
Preference number: 1 (lower is better)
Translates to: GFAASTRQNCASLDR*SENYFGKHNLKINR
Trigger: TCTATTAATTTTAAGATTGTGCTTCCCAAAATAGTTCTCACTTCATCTGTCCAGGGAGGCACAGTTCTGTCTGGTAGAAGCCGCAAAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR GCA 90 bp TCTTACATGTACAGGGTTACACTGGCAGATGATGAGAGTATGGCATaGAACTGGATTTTTCTAGTAGTAACAACAGTGAGCCCTTTCCAT +
Preference number: 1 (lower is better)
Translates to: SYMYRVTLADDESMA*NWIFLVVTTVSPFH
Trigger: ATGGAAAGGGCTCACTGTTGTTACTACTAGAAAAATCCAGTTGCATGCCATACTCTCATCATCTGCCAGTGTAACCCTGTACATGTAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR TCA 90 bp ATAAAAGTGTGTGCTTATCACAAGAAAGAAATGCAGAGTAGACATTaGGGGCAATTTCAACAGGTGTTGCCTACGTGGAATAGCAGCTCA +
Preference number: 1 (lower is better)
Translates to: IKVCAYHKKEMQSRH*GQFQQVLPTWNSSS
Trigger: TGAGCTGCTATTCCACGTAGGCAACACCTGTTGAAATTGCCCTCAATGTCTACTCTGCATTTCTTTCTTGTGATAAGCACACACTTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR TCA 90 bp AACACACACATACACACACACACATACACAGATGTACACACATCATaGACACTCACACACACAGATGTGTATGTCCGTGATTTGCTTCAT +
Preference number: 1 (lower is better)
Translates to: NTHIHTHTYTDVHTS*TLTHTDVYVRDLLH
Trigger: ATGAAGCAAATCACGGACATACACATCTGTGTGTGTGAGTGTTCATGATGTGTGTACATCTGTGTATGTGTGTGTGTGTATGTGTGTGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
3UTR GCA 90 bp ACACTGCAGGTAGTGCAGAGAGACATGGAAGGAAAACACACTGCCTaGTACATAGTTTTTATCCCAGGTATAATTTGTGAGGAATGTATA +
Preference number: 1 (lower is better)
Translates to: TLQVVQRDMEGKHTA*YIVFIPGIICEECI
Trigger: TATACATTCCTCACAAATTATACCTGGGATAAAAACTATGTAGCAGGCAGTGTGTTTTCCTTCCATGTCTCTCTGCACTACCTGCAGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR CCA 90 bp GCATTGAACAAAGCAGCCAGTTTGTTATTGAGATGTTTTCACATCTaGCTTTTGACACAGATAATTGTCCCACAGCTGGCTCTAGAATTT +
Preference number: 1 (lower is better)
Translates to: ALNKAASLLLRCFHI*LLTQIIVPQLALEF
Trigger: AAATTCTAGAGCCAGCTGTGGGACAATTATCTGTGTCAAAAGCCAGATGTGAAAACATCTCAATAACAAACTGGCTGCTTTGTTCAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344576.6
3UTR-3UTR CCA 90 bp GTGAAGAGGCTAAGGGCTTTGCGGCTTCTACCAGACAGAACTGTGCCTCCCTGGTGCGGGCATGGCTGTTaGGATGGAGGACCTGCTGTG +
Preference number: 2 (lower is better)
Translates to: VKRLRALRLLPDRTVPPWCGHGC*DGGPAV
Trigger: CACAGCAGGTCCTCCATCCCAACAGCCATGCCCGCA...CCAGGGAGGCACAGTTCTGTCTGGTAGAAGCCGCAAAGCCCTTAGCCTCTTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR-3UTR CCA 90 bp CAAACAGAGGGGCAGAAGGAACCAAGGCTAGAAGCATGGACTGGGGCCATGCTAATACTCTTGGGAACCTaGCGGCCCACGTGCAGGGGT +
Preference number: 2 (lower is better)
Translates to: QTEGQKEPRLEAWTGAMLILLGT*RPTCRG
Trigger: ACCCCTGCACGTGGGCCGCCAGGTTCCCAAGAGTAT...TAGCATGGCCCCAGTCCATGCTTCTAGCCTTGGTTCCTTCTGCCCCTCTGTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000344576.6
3UTR CAA 90 bp GACCTGCCCATCACAGTCGCCAGATCCGTGAAGAGGCTAAGGGCTTaGCGGCTTCTACCAGACAGAACTGTGCCTCCCTGGACAGATGAA +
Preference number: 2 (lower is better)
Translates to: DLPITVARSVKRLRA*RLLPDRTVPPWTDE
Trigger: TTCATCTGTCCAGGGAGGCACAGTTCTGTCTGGTAGAAGCCGCAAAGCCCTTAGCCTCTTCACGGATCTGGCGACTGTGATGGGCAGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR-3UTR CCA 90 bp CCGCCCTTGAGAACCAGTGCCTTTCCTGCTAAGCAATCCATAGTCCCCTTATGTCGTAAGGAGGGGGTTTaGGGGCAGCTGACCTGGAGG +
Preference number: 2 (lower is better)
Translates to: PPLRTSAFPAKQSIVPLCRKEGV*GQLTWR
Trigger: CCTCCAGGTCAGCTGCCCCCAAACCCCCTCCTTACG...ACATAAGGGGACTATGGATTGCTTAGCAGGAAAGGCACTGGTTCTCAAGGGCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR-3UTR CCA 90 bp CCGCCCTTGAGAACCAGTGCCTTTCCTGCTAAGCAATCCATAGTCCCCTTATGTACCGATCCGGCCTGCTaGGGCCATGAAGGCCTTCTT +
Preference number: 2 (lower is better)
Translates to: PPLRTSAFPAKQSIVPLCTDPAC*GHEGLL
Trigger: AAGAAGGCCTTCATGGCCCCAGCAGGCCGGATCGGT...ACATAAGGGGACTATGGATTGCTTAGCAGGAAAGGCACTGGTTCTCAAGGGCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR-3UTR GCA 90 bp CAAACAAGTCAGTCTAACGCTCATGACTGGAAACCACTGGTCCATCAGTGGGGAAGTACCGATCCGGCCTaGTGGGGCCATGAAGGCCTT +
Preference number: 2 (lower is better)
Translates to: QTSQSNAHDWKPLVHQWGSTDPA*WGHEGL
Trigger: AAGGCCTTCATGGCCCCAGCAGGCCGGATCGGTACT...TCCCCACTGATGGACCAGTGGTTTCCAGTCATGAGCGTTAGACTGACTTGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
3UTR-3UTR GCA 90 bp AGGGCTTTGCGGCTTCTACCAGACAGAACTGTGCCTCCCTGGACAGATGAAGTGCCTCCGTTTCTTCTTTaGCCAGGAAGGGACAGAGTG +
Preference number: 2 (lower is better)
Translates to: RALRLLPDRTVPPWTDEVPPFLL*PGRDRV
Trigger: CACTCTGTCCCTTCCTGGGCAAAGAAGAAACGGAGG...CACTTCATCTGTCCAGGGAGGCACAGTTCTGTCTGGTAGAAGCCGCAAAGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR-3UTR CCA 90 bp CAGCTGTGGGCTATTGGTCCAAATGCTGATGAATCCAATGTGGGCTGGAATCCGCCACTGGTCCATCAGTaGGGAGTAAGTACCGTGGGG +
Preference number: 2 (lower is better)
Translates to: QLWAIGPNADESNVGWNPPLVHQ*GVSTVG
Trigger: CCCCACGGTACTTACTCCCCACTGATGGACCAGTGG...CGGATTCCAGCCCACATTGGATTCATCAGCATTTGGACCAATAGCCCACAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
3UTR CAA 90 bp GAGCTAATGCGGGCATGGCTGTTGGGATGGAGGACCTGCTGTGGCTaGGTCCTGGGTATCGAAAGAGTCTGGATTTTTAGGGCTCATACT +
Preference number: 2 (lower is better)
Translates to: ELMRAWLLGWRTCCG*VLGIERVWIFRAHT
Trigger: AGTATGAGCCCTAAAAATCCAGACTCTTTCGATACCCAGGACCAAGCCACAGCAGGTCCTCCATCCCAACAGCCATGCCCGCATTAGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
3UTR CAA 90 bp CAGTCTTTCTGGTTGGGACCAGAAGATTCCCAAGGGCAGCCGCCCTaGAGAACCAGTGCCTTTCCTGCTAAGCAATCCATAGTCCCCTTA +
Preference number: 2 (lower is better)
Translates to: QSFWLGPEDSQGQPP*RTSAFPAKQSIVPL
Trigger: TAAGGGGACTATGGATTGCTTAGCAGGAAAGGCACTGGTTCTCAAGGGCGGCTGCCCTTGGGAATCTTCTGGTCCCAACCAGAAAGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR-3UTR CCA 90 bp TGCAACTTCCCAAAATGTGCCCGAGGTGGAAGTACTTCCTGGCTAGTCGGTGTAATGGAGGACCTGCTGTaGCTTGGTCCTGGGTATCGA +
Preference number: 2 (lower is better)
Translates to: CNFPKCARGGSTSWLVGVMEDLL*LGPGYR
Trigger: TCGATACCCAGGACCAAGCCACAGCAGGTCCTCCAT...TACACCGACTAGCCAGGAAGTACTTCCACCTCGGGCACATTTTGGGAAGTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
3UTR-3UTR CCA 90 bp CAAACAAGTCAGTCTAACGCTCATGACTGGAAACCACTGGTCCATCAGTGGGGAGAGCTAATGCGGGCATaGCTGTTGGGATGGAGGACC +
Preference number: 2 (lower is better)
Translates to: QTSQSNAHDWKPLVHQWGELMRA*LLGWRT
Trigger: GGTCCTCCATCCCAACAGCCATGCCCGCATTAGCTC...TCCCCACTGATGGACCAGTGGTTTCCAGTCATGAGCGTTAGACTGACTTGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
3UTR-3UTR CCA 90 bp CTAATTACGGAGAAGGCTGGCAGCATGGAGTCCCTGCAGGTTTCTGACAAATTCTGGGTAGGATACTCTTaGGAACCTGGCGGCCCACGT +
Preference number: 2 (lower is better)
Translates to: LITEKAGSMESLQVSDKFWVGYS*EPGGPR
Trigger: ACGTGGGCCGCCAGGTTCCCAAGAGTATCCTACCCA...GAATTTGTCAGAAACCTGCAGGGACTCCATGCTGCCAGCCTTCTCCGTAATTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344576.6
3UTR-3UTR TCA 90 bp AGTCTAAGGAAGAATTCCATCCCCTCCGTTTCTTCTTTGCCCAGGAAGGGACAGGTACCTGCCATGACTTaGTACAGTACCGATCCGGCC +
Preference number: 2 (lower is better)
Translates to: SLRKNSIPSVSSLPRKGQVPAMT*YSTDPA
Trigger: GGCCGGATCGGTACTGTATCAAGTCATGGCAGGTAC...CTGTCCCTTCCTGGGCAAAGAAGAAACGGAGGGGATGGAATTCTTCCTTAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
3UTR-3UTR TCA 90 bp ATAACTTACTTAGAGAATGCAGAGGGTCCCAGGGCGTTTTCAAAGCTCAGGTGGCTCACAGTGCCTGGCTaGTGGGTCCTGTCTGGCATT +
Preference number: 2 (lower is better)
Translates to: ITYLENAEGPRAFSKLRWLTVPG*WVLSGI
Trigger: AATGCCAGACAGGACCCATCAGCCAGGCACTGTGAG...CCACCTGAGCTTTGAAAACGCCCTGGGACCCTCTGCATTCTCTAAGTAAGTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR-3UTR GCA 90 bp TTTGATGTGTCATCCTCTCTTGCTGATTTCATGACAGCAAGACAGGGGCAGCATAGTACCGATCCGGCCTaGTGGGGCCATGAAGGCCTT +
Preference number: 2 (lower is better)
Translates to: FDVSSSLADFMTARQGQHSTDPA*WGHEGL
Trigger: AAGGCCTTCATGGCCCCAGCAGGCCGGATCGGTACT...ATGCTGCCCCTGTCTTGCTGTCATGAAATCAGCAAGAGAGGATGACACATCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
3UTR-3UTR GCA 90 bp TTGGGCAGCTCCTCTCCTGACCTGCCCATCACAGTCGCCAGATCCGTGAAGAGGTTATCCTACTGTACCTaGCATGACTTGATACAGTAC +
Preference number: 2 (lower is better)
Translates to: LGSSSPDLPITVARSVKRLSYCT*HDLIQY
Trigger: GTACTGTATCAAGTCATGGCAGGTACAGTAGGATAA...CCTCTTCACGGATCTGGCGACTGTGATGGGCAGGTCAGGAGAGGAGCTGCCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR-3UTR CCA 90 bp TGCAACTTCCCAAAATGTGCCCGAGGTGGAAGTACTTCCTGGCTAGTCGGTGTAGCTGTGGCTTGGTCCTaGGTATCGAAAGAGTCTGGA +
Preference number: 2 (lower is better)
Translates to: CNFPKCARGGSTSWLVGVAVAWS*VSKESG
Trigger: TCCAGACTCTTTCGATACCCAGGACCAAGCCACAGC...TACACCGACTAGCCAGGAAGTACTTCCACCTCGGGCACATTTTGGGAAGTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
3UTR-3UTR CCA 90 bp TGCAGTGGAAGCCTTGAAGCAGAACCACTGGAATCAAGCATCCTCTGGAAGACTGGACCTGCTGTGGCTTaGTCCTGGGTATCGAAAGAG +
Preference number: 2 (lower is better)
Translates to: CSGSLEAEPLESSILWKTGPAVA*SWVSKE
Trigger: CTCTTTCGATACCCAGGACCAAGCCACAGCAGGTCC...AGTCTTCCAGAGGATGCTTGATTCCAGTGGTTCTGCTTCAAGGCTTCCACTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
3UTR-3UTR CCA 90 bp TTTGATGTGTCATCCTCTCTTGCTGATTTCATGACAGCAAGACAGGGGCAGCATTGCGGGCATGGCTGTTaGGATGGAGGACCTGCTGTG +
Preference number: 2 (lower is better)
Translates to: FDVSSSLADFMTARQGQHCGHGC*DGGPAV
Trigger: CACAGCAGGTCCTCCATCCCAACAGCCATGCCCGCA...ATGCTGCCCCTGTCTTGCTGTCATGAAATCAGCAAGAGAGGATGACACATCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
3UTR-3UTR TCA 90 bp CCGCCCTTGAGAACCAGTGCCTTTCCTGCTAAGCAATCCATAGTCCCCTTATGTGAGACACTTTTTGTGTaGCAAAGCGTAAGGAGGGGG +
Preference number: 2 (lower is better)
Translates to: PPLRTSAFPAKQSIVPLCETLFV*QSVRRG
Trigger: CCCCCTCCTTACGCTTTGTCACACAAAAAGTGTCTC...ACATAAGGGGACTATGGATTGCTTAGCAGGAAAGGCACTGGTTCTCAAGGGCGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR-3UTR TCA 90 bp GTGAAGAGGCTAAGGGCTTTGCGGCTTCTACCAGACAGAACTGTGCCTCCCTGGAAGTGCTTGAATAGATaGCTCAAGGCAGAGACACTT +
Preference number: 2 (lower is better)
Translates to: VKRLRALRLLPDRTVPPWKCLNR*LKAETL
Trigger: AAGTGTCTCTGCCTTGAGTCATCTATTCAAGCACTT...CCAGGGAGGCACAGTTCTGTCTGGTAGAAGCCGCAAAGCCCTTAGCCTCTTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR-3UTR GCA 90 bp TTTGATGTGTCATCCTCTCTTGCTGATTTCATGACAGCAAGACAGGGGCAGCATTTGGGATGGAGGACCTaGTGTGGCTTGGTCCTGGGT +
Preference number: 2 (lower is better)
Translates to: FDVSSSLADFMTARQGQHLGWRT*CGLVLG
Trigger: ACCCAGGACCAAGCCACAGCAGGTCCTCCATCCCAA...ATGCTGCCCCTGTCTTGCTGTCATGAAATCAGCAAGAGAGGATGACACATCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
3UTR-3UTR GCA 90 bp GAATTTGCCTCCAAGTCCATGTCCTTGTGGCTAATCCCTAGGCCAGTAGTTCTCTGGAGTGCAATAGGATaGATCCACAGTGCTCCCCCT +
Preference number: 2 (lower is better)
Translates to: EFASKSMSLWLIPRPVVLWSAIG*IHSAPP
Trigger: AGGGGGAGCACTGTGGATGCATCCTATTGCACTCCA...GAGAACTACTGGCCTAGGGATTAGCCACAAGGACATGGACTTGGAGGCAAATTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR-3UTR TCA 90 bp CCGCCCTTGAGAACCAGTGCCTTTCCTGCTAAGCAATCCATAGTCCCCTTATGTCTACTGTACCTGCCATaGCTTGATACAGTACCGATC +
Preference number: 2 (lower is better)
Translates to: PPLRTSAFPAKQSIVPLCLLYLP*LDTVPI
Trigger: GATCGGTACTGTATCAAGTCATGGCAGGTACAGTAG...ACATAAGGGGACTATGGATTGCTTAGCAGGAAAGGCACTGGTTCTCAAGGGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR-3UTR TCA 90 bp CAGCTGTGGGCTATTGGTCCAAATGCTGATGAATCCAATGTGGGCTGGAATCCGCTACTGTACCTGCCATaGCTTGATACAGTACCGATC +
Preference number: 2 (lower is better)
Translates to: QLWAIGPNADESNVGWNPLLYLP*LDTVPI
Trigger: GATCGGTACTGTATCAAGTCATGGCAGGTACAGTAG...CGGATTCCAGCCCACATTGGATTCATCAGCATTTGGACCAATAGCCCACAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
3UTR-3UTR TCA 90 bp GGGCAGAAGGAACCAAGGCTAGAAGCATGGACTGGGGCCATGCTAATTACGGAGACAAATTCTGTGCTTTaGACAATCATCTGGCAGCGA +
Preference number: 2 (lower is better)
Translates to: GQKEPRLEAWTGAMLITETNSVL*TIIWQR
Trigger: TCGCTGCCAGATGATTGTTCAAAGCACAGAATTTGT...CTCCGTAATTAGCATGGCCCCAGTCCATGCTTCTAGCCTTGGTTCCTTCTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344576.6
3UTR-3UTR GCA 90 bp CAAACAAGTCAGTCTAACGCTCATGACTGGAAACCACTGGTCCATCAGTGGGGAAAGACTTGTGGCTTGTaGTCCTTGCTCACAGTTGGG +
Preference number: 2 (lower is better)
Translates to: QTSQSNAHDWKPLVHQWGKTCGL*SLLTVG
Trigger: CCCAACTGTGAGCAAGGAGCACAAGCCACAAGTCTT...TCCCCACTGATGGACCAGTGGTTTCCAGTCATGAGCGTTAGACTGACTTGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
3UTR-3UTR GCA 90 bp ATTGGAATGACCTCAGGAGCTTTAAAAACTACGAATGCTTGGGTTTCAGCCCCAAACCTCCCTGCTCTGTaGTCTCACAGTGCCTGGCTG +
Preference number: 2 (lower is better)
Translates to: IGMTSGALKTTNAWVSAPNLPAL*SHSAWL
Trigger: CAGCCAGGCACTGTGAGAGCACAGAGCAGGGAGGTT...TGGGGCTGAAACCCAAGCATTCGTAGTTTTTAAAGCTCCTGAGGTCATTCCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR-3UTR GCA 90 bp CCGCCCTTGAGAACCAGTGCCTTTCCTGCTAAGCAATCCATAGTCCCCTTATGTTGTCATCAGCTGGAGTaGAATAGGATGCATCCACAG +
Preference number: 2 (lower is better)
Translates to: PPLRTSAFPAKQSIVPLCCHQLE*NRMHPQ
Trigger: CTGTGGATGCATCCTATTGCACTCCAGCTGATGACA...ACATAAGGGGACTATGGATTGCTTAGCAGGAAAGGCACTGGTTCTCAAGGGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR-3UTR CCA 90 bp CCTCAAATTAGGAGATACGTTTTTGCGAGAACAAAAGCGGTGCTATCCTTAGGTACCGATCCGGCCTGCTaGGGCCATGAAGGCCTTCTT +
Preference number: 2 (lower is better)
Translates to: PQIRRYVFARTKAVLSLGTDPAC*GHEGLL
Trigger: AAGAAGGCCTTCATGGCCCCAGCAGGCCGGATCGGT...ACCTAAGGATAGCACCGCTTTTGTTCTCGCAAAAACGTATCTCCTAATTTGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
3UTR-3UTR TCA 90 bp AGTCACAACATCAAGAACTTTCAGCAAACACCTAAGCTTTGGTGTCATCAGCTGGGGTTTGGGGGCAGCTaGCCTGGAGGGAACATATAC +
Preference number: 2 (lower is better)
Translates to: SHNIKNFQQTPKLWCHQLGFGGS*PGGNIY
Trigger: GTATATGTTCCCTCCAGGTCAGCTGCCCCCAAACCC...CAGCTGATGACACCAAAGCTTAGGTGTTTGCTGAAAGTTCTTGATGTTGTGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR-3UTR TCA 90 bp ATTGGAATGACCTCAGGAGCTTTAAAAACTACGAATGCTTGGGTTTCAGCCCCAGGCAGGTGTGGCTGGTaGAAGAGGCAAGGATTTCTG +
Preference number: 2 (lower is better)
Translates to: IGMTSGALKTTNAWVSAPGRCGW*KRQGFL
Trigger: CAGAAATCCTTGCCTCTTTCACCAGCCACACCTGCC...TGGGGCTGAAACCCAAGCATTCGTAGTTTTTAAAGCTCCTGAGGTCATTCCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR-3UTR GCA 90 bp GTAAATGCTTCACAGTTTGAAGACAAAGGAATGCAACTTCCCAAAATGTGCCCGTTGGGATGGAGGACCTaGTGTGGCTTGGTCCTGGGT +
Preference number: 2 (lower is better)
Translates to: VNASQFEDKGMQLPKMCPLGWRT*CGLVLG
Trigger: ACCCAGGACCAAGCCACAGCAGGTCCTCCATCCCAA...CGGGCACATTTTGGGAAGTTGCATTCCTTTGTCTTCAAACTGTGAAGCATTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
3UTR-3UTR CCA 90 bp CCCTTTCCATTAACACTGCCCCAACAGAACCTGCCTCAGACCAAGCTAAATGTGAAAATGTGCCCGAGGTaGAAGTACTTCCTGGCTAGT +
Preference number: 2 (lower is better)
Translates to: PFPLTLPQQNLPQTKLNVKMCPR*KYFLAS
Trigger: ACTAGCCAGGAAGTACTTCCACCTCGGGCACATTTT...CACATTTAGCTTGGTCTGAGGCAGGTTCTGTTGGGGCAGTGTTAATGGAAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR-3UTR CCA 90 bp TTTGATGTGTCATCCTCTCTTGCTGATTTCATGACAGCAAGACAGGGGCAGCATCCTCTGGAAGACTTGTaGCTTGTGCTCCTTGCTCAC +
Preference number: 2 (lower is better)
Translates to: FDVSSSLADFMTARQGQHPLEDL*LVLLAH
Trigger: GTGAGCAAGGAGCACAAGCCACAAGTCTTCCAGAGG...ATGCTGCCCCTGTCTTGCTGTCATGAAATCAGCAAGAGAGGATGACACATCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
3UTR-3UTR CCA 90 bp AGTCTAAGGAAGAATTCCATCCCCTCCGTTTCTTCTTTGCCCAGGAAGGGACAGGAATCAAGCATCCTCTaGAAGACTTGTGGCTTGTGC +
Preference number: 2 (lower is better)
Translates to: SLRKNSIPSVSSLPRKGQESSIL*KTCGLC
Trigger: GCACAAGCCACAAGTCTTCCAGAGGATGCTTGATTC...CTGTCCCTTCCTGGGCAAAGAAGAAACGGAGGGGATGGAATTCTTCCTTAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
3UTR-3UTR CCA 90 bp CCTCAAATTAGGAGATACGTTTTTGCGAGAACAAAAGCGGTGCTATCCTTAGGTCCACTGGTCCATCAGTaGGGAGTAAGTACCGTGGGG +
Preference number: 2 (lower is better)
Translates to: PQIRRYVFARTKAVLSLGPLVHQ*GVSTVG
Trigger: CCCCACGGTACTTACTCCCCACTGATGGACCAGTGG...ACCTAAGGATAGCACCGCTTTTGTTCTCGCAAAAACGTATCTCCTAATTTGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
3UTR-3UTR CCA 90 bp CTTAGAGGGAGCAGGTTGTTTAGGGTGACTGACCTCAGCCTTATGTGGACTTTATGGGGGCAGCTGACCTaGAGGGAACATATACTCTTT +
Preference number: 2 (lower is better)
Translates to: LRGSRLFRVTDLSLMWTLWGQLT*REHILF
Trigger: AAAGAGTATATGTTCCCTCCAGGTCAGCTGCCCCCA...TAAAGTCCACATAAGGCTGAGGTCAGTCACCCTAAACAACCTGCTCCCTCTAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR CAA 90 bp GCTCTGTGCTCTCACAGTGCCTGGCTGATGGGTCCTGTCTGGCATTaGTCACGTTGTTTTAAGGTTAGCATCTATGAGTCCATTTCCTTT +
Preference number: 2 (lower is better)
Translates to: ALCSHSAWLMGPVWH*SRCFKVSIYESISF
Trigger: AAAGGAAATGGACTCATAGATGCTAACCTTAAAACAACGTGACAAATGCCAGACAGGACCCATCAGCCAGGCACTGTGAGAGCACAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR CAA 90 bp AACTCTGTTCAGGTTCTTGACTCTCAGCGACAGATGTGGAGGTCTTaGTGTCTTAGCTCTCTAGGCCTGAGAATCACATACACCTGCAGA +
Preference number: 2 (lower is better)
Translates to: NSVQVLDSQRQMWRS*CLSSLGLRITYTCR
Trigger: TCTGCAGGTGTATGTGATTCTCAGGCCTAGAGAGCTAAGACACAAAGACCTCCACATCTGTCGCTGAGAGTCAAGAACCTGAACAGAGTT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR CAA 90 bp CCTTCTAGTGCTTGGAGAACCTTCATGGAAACTCTGTTCAGGTTCTaGACTCTCAGCGACAGATGTGGAGGTCTTTGTGTCTTAGCTCTC +
Preference number: 2 (lower is better)
Translates to: PSSAWRTFMETLFRF*TLSDRCGGLCVLAL
Trigger: GAGAGCTAAGACACAAAGACCTCCACATCTGTCGCTGAGAGTCAAGAACCTGAACAGAGTTTCCATGAAGGTTCTCCAAGCACTAGAAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR-3UTR TCA 90 bp CAGCTGTGGGCTATTGGTCCAAATGCTGATGAATCCAATGTGGGCTGGAATCCGACAGGGGCAGCATACTaGGTTTCAAAACAATGGAAT +
Preference number: 2 (lower is better)
Translates to: QLWAIGPNADESNVGWNPTGAAY*VSKQWN
Trigger: ATTCCATTGTTTTGAAACTCAGTATGCTGCCCCTGT...CGGATTCCAGCCCACATTGGATTCATCAGCATTTGGACCAATAGCCCACAGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
3UTR-3UTR CCA 90 bp CTACCTGAATTCCACACTACTCATAATGCTACTGTCATTCGCACCTGTAAAATGGAGCTAATGCGGGCATaGCTGTTGGGATGGAGGACC +
Preference number: 2 (lower is better)
Translates to: LPEFHTTHNATVIRTCKMELMRA*LLGWRT
Trigger: GGTCCTCCATCCCAACAGCCATGCCCGCATTAGCTC...CATTTTACAGGTGCGAATGACAGTAGCATTATGAGTAGTGTGGAATTCAGGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
3UTR-3UTR CCA 90 bp CCTCAAATTAGGAGATACGTTTTTGCGAGAACAAAAGCGGTGCTATCCTTAGGTCTCCTTGCTCACAGTTaGGCCTGGATGAACTCAGGG +
Preference number: 2 (lower is better)
Translates to: PQIRRYVFARTKAVLSLGLLAHS*AWMNSG
Trigger: CCCTGAGTTCATCCAGGCCCAACTGTGAGCAAGGAG...ACCTAAGGATAGCACCGCTTTTGTTCTCGCAAAAACGTATCTCCTAATTTGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
3UTR-3UTR TCA 90 bp CTACCTGAATTCCACACTACTCATAATGCTACTGTCATTCGCACCTGTAAAATGACAGTTGGGCCTGGATaGACTCAGGGTAGCAAGTGC +
Preference number: 2 (lower is better)
Translates to: LPEFHTTHNATVIRTCKMTVGPG*TQGSKC
Trigger: GCACTTGCTACCCTGAGTTCATCCAGGCCCAACTGT...CATTTTACAGGTGCGAATGACAGTAGCATTATGAGTAGTGTGGAATTCAGGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
3UTR-3UTR TCA 90 bp CTTAGAGGGAGCAGGTTGTTTAGGGTGACTGACCTCAGCCTTATGTGGACTTTAGTCATCCTCTCTTGCTaGTTTCATGACAGCAAGACA +
Preference number: 2 (lower is better)
Translates to: LRGSRLFRVTDLSLMWTLVILSC*FHDSKT
Trigger: TGTCTTGCTGTCATGAAATCAGCAAGAGAGGATGAC...TAAAGTCCACATAAGGCTGAGGTCAGTCACCCTAAACAACCTGCTCCCTCTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR-3UTR TCA 90 bp GAATTTGCCTCCAAGTCCATGTCCTTGTGGCTAATCCCTAGGCCAGTAGTTCTCTTCTTGACACATAAGTaGCAGCAGAATGTAGGTCCT +
Preference number: 2 (lower is better)
Translates to: EFASKSMSLWLIPRPVVLFLTHK*QQNVGP
Trigger: AGGACCTACATTCTGCTGTCACTTATGTGTCAAGAA...GAGAACTACTGGCCTAGGGATTAGCCACAAGGACATGGACTTGGAGGCAAATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR-3UTR TCA 90 bp GAATTTGCCTCCAAGTCCATGTCCTTGTGGCTAATCCCTAGGCCAGTAGTTCTCCTAACCAAAGTGTGCTaGACATTATTAGGCTCTCCA +
Preference number: 2 (lower is better)
Translates to: EFASKSMSLWLIPRPVVLLTKVC*TLLGSP
Trigger: TGGAGAGCCTAATAATGTTCAGCACACTTTGGTTAG...GAGAACTACTGGCCTAGGGATTAGCCACAAGGACATGGACTTGGAGGCAAATTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR-3UTR CCA 90 bp TGCAGTGGAAGCCTTGAAGCAGAACCACTGGAATCAAGCATCCTCTGGAAGACTGGTATCGAAAGAGTCTaGATTTTTAGGGCTCATACT +
Preference number: 2 (lower is better)
Translates to: CSGSLEAEPLESSILWKTGIERV*IFRAHT
Trigger: AGTATGAGCCCTAAAAATCCAGACTCTTTCGATACC...AGTCTTCCAGAGGATGCTTGATTCCAGTGGTTCTGCTTCAAGGCTTCCACTGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
3UTR-3UTR CCA 90 bp TTCTGCTCAAAGGGACAATATTCTTGCTGGATGCGTTTCTGTAAATGCTTCACAGCTGTGGCTTGGTCCTaGGTATCGAAAGAGTCTGGA +
Preference number: 2 (lower is better)
Translates to: FCSKGQYSCWMRFCKCFTAVAWS*VSKESG
Trigger: TCCAGACTCTTTCGATACCCAGGACCAAGCCACAGC...TGTGAAGCATTTACAGAAACGCATCCAGCAAGAATATTGTCCCTTTGAGCAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
3UTR-3UTR CCA 90 bp CTACCTGAATTCCACACTACTCATAATGCTACTGTCATTCGCACCTGTAAAATGCCTCTGGAAGACTTGTaGCTTGTGCTCCTTGCTCAC +
Preference number: 2 (lower is better)
Translates to: LPEFHTTHNATVIRTCKMPLEDL*LVLLAH
Trigger: GTGAGCAAGGAGCACAAGCCACAAGTCTTCCAGAGG...CATTTTACAGGTGCGAATGACAGTAGCATTATGAGTAGTGTGGAATTCAGGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
3UTR-3UTR CCA 90 bp TTTGATGTGTCATCCTCTCTTGCTGATTTCATGACAGCAAGACAGGGGCAGCATTTGAAGCAGAACCACTaGAATCAAGCATCCTCTGGA +
Preference number: 2 (lower is better)
Translates to: FDVSSSLADFMTARQGQHLKQNH*NQASSG
Trigger: TCCAGAGGATGCTTGATTCCAGTGGTTCTGCTTCAA...ATGCTGCCCCTGTCTTGCTGTCATGAAATCAGCAAGAGAGGATGACACATCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
3UTR-3UTR CCA 90 bp ATTGGAATGACCTCAGGAGCTTTAAAAACTACGAATGCTTGGGTTTCAGCCCCAAGAACTGTGCCTCCCTaGACAGATGAAGTGAGAACT +
Preference number: 2 (lower is better)
Translates to: IGMTSGALKTTNAWVSAPRTVPP*TDEVRT
Trigger: AGTTCTCACTTCATCTGTCCAGGGAGGCACAGTTCT...TGGGGCTGAAACCCAAGCATTCGTAGTTTTTAAAGCTCCTGAGGTCATTCCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR-3UTR CCA 90 bp ATTGGAATGACCTCAGGAGCTTTAAAAACTACGAATGCTTGGGTTTCAGCCCCAAAGCCACAGTCTTTCTaGTTGGGACCAGAAGATTCC +
Preference number: 2 (lower is better)
Translates to: IGMTSGALKTTNAWVSAPKPQSF*LGPEDS
Trigger: GGAATCTTCTGGTCCCAACCAGAAAGACTGTGGCTT...TGGGGCTGAAACCCAAGCATTCGTAGTTTTTAAAGCTCCTGAGGTCATTCCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR-3UTR CCA 90 bp TACTCTGTGACAGGCGTTGTTCTAGCATTGAACAAAGCAGCCAGTTTGTTATTGCCAAGGCTAGAAGCATaGACTGGGGCCATGCTAATT +
Preference number: 2 (lower is better)
Translates to: YSVTGVVLALNKAASLLLPRLEA*TGAMLI
Trigger: AATTAGCATGGCCCCAGTCCATGCTTCTAGCCTTGG...CAATAACAAACTGGCTGCTTTGTTCAATGCTAGAACAACGCCTGTCACAGAGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344576.6
3UTR-3UTR TCA 90 bp TGCAGTGGAAGCCTTGAAGCAGAACCACTGGAATCAAGCATCCTCTGGAAGACTAAATGCTTCACAGTTTaGAGACAAAGGAATGCAACT +
Preference number: 2 (lower is better)
Translates to: CSGSLEAEPLESSILWKTKCFTV*RQRNAT
Trigger: AGTTGCATTCCTTTGTCTTCAAACTGTGAAGCATTT...AGTCTTCCAGAGGATGCTTGATTCCAGTGGTTCTGCTTCAAGGCTTCCACTGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
3UTR-3UTR TCA 90 bp AGTTTCTACTCTGTGACAGGCGTTGTTCTAGCATTGAACAAAGCAGCCAGTTTGGTCCCTGCAGGTTTCTaGCAAATTCTGTGCTTTGAA +
Preference number: 2 (lower is better)
Translates to: SFYSVTGVVLALNKAASLVPAGF*QILCFE
Trigger: TTCAAAGCACAGAATTTGTCAGAAACCTGCAGGGAC...CAAACTGGCTGCTTTGTTCAATGCTAGAACAACGCCTGTCACAGAGTAGAAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344576.6
3UTR-3UTR GCA 90 bp TACTCTGTGACAGGCGTTGTTCTAGCATTGAACAAAGCAGCCAGTTTGTTATTGGCAGCATGGAGTCCCTaGAGGTTTCTGACAAATTCT +
Preference number: 2 (lower is better)
Translates to: YSVTGVVLALNKAASLLLAAWSP*RFLTNS
Trigger: AGAATTTGTCAGAAACCTGCAGGGACTCCATGCTGC...CAATAACAAACTGGCTGCTTTGTTCAATGCTAGAACAACGCCTGTCACAGAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344576.6
3UTR-3UTR GCA 90 bp ACACAGATGTACACACATCATGAACACTCACACACACAGATGTGTATGTCCGTGACAACAAAGAGCTTGTaGAGGCTCGGTCATGTGTTT +
Preference number: 2 (lower is better)
Translates to: TQMYTHHEHSHTQMCMSVTTKSL*RLGHVF
Trigger: AAACACATGACCGAGCCTGCACAAGCTCTTTGTTGT...CACGGACATACACATCTGTGTGTGTGAGTGTTCATGATGTGTGTACATCTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
3UTR-3UTR CCA 90 bp CACACTGCCTGCTACATAGTTTTTATCCCAGGTATAATTTGTGAGGAATGTATAATGGAGGACCTGCTGTaGCTTGGTCCTGGGTATCGA +
Preference number: 2 (lower is better)
Translates to: HTACYIVFIPGIICEECIMEDLL*LGPGYR
Trigger: TCGATACCCAGGACCAAGCCACAGCAGGTCCTCCAT...TATACATTCCTCACAAATTATACCTGGGATAAAAACTATGTAGCAGGCAGTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR-3UTR CCA 90 bp GTAAATGCTTCACAGTTTGAAGACAAAGGAATGCAACTTCCCAAAATGTGCCCGGGTGGAAGTACTTCCTaGCTAGTCGGTGTAAACGTT +
Preference number: 2 (lower is better)
Translates to: VNASQFEDKGMQLPKMCPGGSTS*LVGVNV
Trigger: AACGTTTACACCGACTAGCCAGGAAGTACTTCCACC...CGGGCACATTTTGGGAAGTTGCATTCCTTTGTCTTCAAACTGTGAAGCATTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
3UTR-3UTR CCA 90 bp CCTCAAATTAGGAGATACGTTTTTGCGAGAACAAAAGCGGTGCTATCCTTAGGTTCTAACGCTCATGACTaGAAACCACTGGTCCATCAG +
Preference number: 2 (lower is better)
Translates to: PQIRRYVFARTKAVLSLGSNAHD*KPLVHQ
Trigger: CTGATGGACCAGTGGTTTCCAGTCATGAGCGTTAGA...ACCTAAGGATAGCACCGCTTTTGTTCTCGCAAAAACGTATCTCCTAATTTGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
3UTR-3UTR CCA 90 bp AGTCACAACATCAAGAACTTTCAGCAAACACCTAAGCTTTGGTGTCATCAGCTGCCACATTCTCAGCTGTaGGCTATTGGTCCAAATGCT +
Preference number: 2 (lower is better)
Translates to: SHNIKNFQQTPKLWCHQLPHSQL*AIGPNA
Trigger: AGCATTTGGACCAATAGCCCACAGCTGAGAATGTGG...CAGCTGATGACACCAAAGCTTAGGTGTTTGCTGAAAGTTCTTGATGTTGTGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR-3UTR CCA 90 bp GAATTTGCCTCCAAGTCCATGTCCTTGTGGCTAATCCCTAGGCCAGTAGTTCTCTCTTCCTTGATAAATTaGATGGGGTGGATATTGACT +
Preference number: 2 (lower is better)
Translates to: EFASKSMSLWLIPRPVVLSSLIN*MGWILT
Trigger: AGTCAATATCCACCCCATCCAATTTATCAAGGAAGA...GAGAACTACTGGCCTAGGGATTAGCCACAAGGACATGGACTTGGAGGCAAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR-3UTR TCA 90 bp AAACACACTGCCTGCTACATAGTTTTTATCCCAGGTATAATTTGTGAGGAATGTCTCTTGCTGATTTCATaGCAGCAAGACAGGGGCAGC +
Preference number: 2 (lower is better)
Translates to: KHTACYIVFIPGIICEECLLLIS*QQDRGS
Trigger: GCTGCCCCTGTCTTGCTGTCATGAAATCAGCAAGAG...ACATTCCTCACAAATTATACCTGGGATAAAAACTATGTAGCAGGCAGTGTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR-3UTR TCA 90 bp AAACACACTGCCTGCTACATAGTTTTTATCCCAGGTATAATTTGTGAGGAATGTTCCAAAGACCACATCTaGAGCTGGGGTCATGGGGTA +
Preference number: 2 (lower is better)
Translates to: KHTACYIVFIPGIICEECSKDHI*SWGHGV
Trigger: TACCCCATGACCCCAGCTTCAGATGTGGTCTTTGGA...ACATTCCTCACAAATTATACCTGGGATAAAAACTATGTAGCAGGCAGTGTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR-3UTR GCA 90 bp CTACCTGAATTCCACACTACTCATAATGCTACTGTCATTCGCACCTGTAAAATGCAACTTCCCAAAATGTaGCCGAGGTGGAAGTACTTC +
Preference number: 2 (lower is better)
Translates to: LPEFHTTHNATVIRTCKMQLPKM*PRWKYF
Trigger: GAAGTACTTCCACCTCGGGCACATTTTGGGAAGTTG...CATTTTACAGGTGCGAATGACAGTAGCATTATGAGTAGTGTGGAATTCAGGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
3UTR-3UTR GCA 90 bp TGCAGTGGAAGCCTTGAAGCAGAACCACTGGAATCAAGCATCCTCTGGAAGACTAATATTCTTGCTGGATaGGTTTCTGTAAATGCTTCA +
Preference number: 2 (lower is better)
Translates to: CSGSLEAEPLESSILWKTNILAG*VSVNAS
Trigger: TGAAGCATTTACAGAAACGCATCCAGCAAGAATATT...AGTCTTCCAGAGGATGCTTGATTCCAGTGGTTCTGCTTCAAGGCTTCCACTGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
3UTR-3UTR GCA 90 bp AAACACACTGCCTGCTACATAGTTTTTATCCCAGGTATAATTTGTGAGGAATGTTCAGGTGGGGGTATTTaGCCCTTTCCAGCTGAACTG +
Preference number: 2 (lower is better)
Translates to: KHTACYIVFIPGIICEECSGGGI*PFPAEL
Trigger: CAGTTCAGCTGGAAAGGGGCAAATACCCCCACCTGA...ACATTCCTCACAAATTATACCTGGGATAAAAACTATGTAGCAGGCAGTGTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR-3UTR CCA 90 bp CTACCTGAATTCCACACTACTCATAATGCTACTGTCATTCGCACCTGTAAAATGGGTGGAAGTACTTCCTaGCTAGTCGGTGTAAACGTT +
Preference number: 2 (lower is better)
Translates to: LPEFHTTHNATVIRTCKMGGSTS*LVGVNV
Trigger: AACGTTTACACCGACTAGCCAGGAAGTACTTCCACC...CATTTTACAGGTGCGAATGACAGTAGCATTATGAGTAGTGTGGAATTCAGGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
3UTR-3UTR CCA 90 bp TTTGATGTGTCATCCTCTCTTGCTGATTTCATGACAGCAAGACAGGGGCAGCATGGACAATATTCTTGCTaGATGCGTTTCTGTAAATGC +
Preference number: 2 (lower is better)
Translates to: FDVSSSLADFMTARQGQHGQYSC*MRFCKC
Trigger: GCATTTACAGAAACGCATCCAGCAAGAATATTGTCC...ATGCTGCCCCTGTCTTGCTGTCATGAAATCAGCAAGAGAGGATGACACATCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
3UTR-3UTR CCA 90 bp AAACACACTGCCTGCTACATAGTTTTTATCCCAGGTATAATTTGTGAGGAATGTGACCTCAGCCTTATGTaGACTTTAGCAGTGGAGGCC +
Preference number: 2 (lower is better)
Translates to: KHTACYIVFIPGIICEECDLSLM*TLAVEA
Trigger: GGCCTCCACTGCTAAAGTCCACATAAGGCTGAGGTC...ACATTCCTCACAAATTATACCTGGGATAAAAACTATGTAGCAGGCAGTGTGTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR-3UTR GCA 90 bp TTTGATGTGTCATCCTCTCTTGCTGATTTCATGACAGCAAGACAGGGGCAGCATAAGGGACAATATTCTTaGTGGATGCGTTTCTGTAAA +
Preference number: 2 (lower is better)
Translates to: FDVSSSLADFMTARQGQHKGQYS*WMRFCK
Trigger: TTTACAGAAACGCATCCAGCAAGAATATTGTCCCTT...ATGCTGCCCCTGTCTTGCTGTCATGAAATCAGCAAGAGAGGATGACACATCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
3UTR-3UTR GCA 90 bp CACACTGCCTGCTACATAGTTTTTATCCCAGGTATAATTTGTGAGGAATGTATATTCGCACCTGTAAAATaGCCTGTTGTGGCCAGAGCT +
Preference number: 2 (lower is better)
Translates to: HTACYIVFIPGIICEECIFAPVK*PVVARA
Trigger: AGCTCTGGCCACAACAGGGCATTTTACAGGTGCGAA...TATACATTCCTCACAAATTATACCTGGGATAAAAACTATGTAGCAGGCAGTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR-3UTR TCA 90 bp AGTCACAACATCAAGAACTTTCAGCAAACACCTAAGCTTTGGTGTCATCAGCTGTTTCCCAGTTCTGACTaGAATATTTCTGCATGTCCT +
Preference number: 2 (lower is better)
Translates to: SHNIKNFQQTPKLWCHQLFPSSD*NISACP
Trigger: AGGACATGCAGAAATATTTCAGTCAGAACTGGGAAA...CAGCTGATGACACCAAAGCTTAGGTGTTTGCTGAAAGTTCTTGATGTTGTGACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR-3UTR GCA 90 bp CCTCAAATTAGGAGATACGTTTTTGCGAGAACAAAAGCGGTGCTATCCTTAGGTTTATCCTACTGTACCTaGCATGACTTGATACAGTAC +
Preference number: 2 (lower is better)
Translates to: PQIRRYVFARTKAVLSLGLSYCT*HDLIQY
Trigger: GTACTGTATCAAGTCATGGCAGGTACAGTAGGATAA...ACCTAAGGATAGCACCGCTTTTGTTCTCGCAAAAACGTATCTCCTAATTTGAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
3UTR-3UTR GCA 90 bp ATTGGAATGACCTCAGGAGCTTTAAAAACTACGAATGCTTGGGTTTCAGCCCCATTCTCACTAAGCATGTaGAGAGATGATAGCTCAAAA +
Preference number: 2 (lower is better)
Translates to: IGMTSGALKTTNAWVSAPFSLSM*RDDSSK
Trigger: TTTTGAGCTATCATCTCTGCACATGCTTAGTGAGAA...TGGGGCTGAAACCCAAGCATTCGTAGTTTTTAAAGCTCCTGAGGTCATTCCAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR-3UTR CCA 90 bp AAACACACTGCCTGCTACATAGTTTTTATCCCAGGTATAATTTGTGAGGAATGTCAAACACCTAAGCTTTaGTGTCATCAGCTGGAGTGC +
Preference number: 2 (lower is better)
Translates to: KHTACYIVFIPGIICEECQTPKL*CHQLEC
Trigger: GCACTCCAGCTGATGACACCAAAGCTTAGGTGTTTG...ACATTCCTCACAAATTATACCTGGGATAAAAACTATGTAGCAGGCAGTGTGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR-3UTR TCA 90 bp AAACACACTGCCTGCTACATAGTTTTTATCCCAGGTATAATTTGTGAGGAATGTAGAGCTGTAAGTGCTTaGATAGATGACTCAAGGCAG +
Preference number: 2 (lower is better)
Translates to: KHTACYIVFIPGIICEECRAVSA*IDDSRQ
Trigger: CTGCCTTGAGTCATCTATTCAAGCACTTACAGCTCT...ACATTCCTCACAAATTATACCTGGGATAAAAACTATGTAGCAGGCAGTGTGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR-3UTR TCA 90 bp CACACTGCCTGCTACATAGTTTTTATCCCAGGTATAATTTGTGAGGAATGTATATGTAGGGGCTCTGACTaGTCTGGGAGTCAAAAATTA +
Preference number: 2 (lower is better)
Translates to: HTACYIVFIPGIICEECICRGSD*SGSQKL
Trigger: TAATTTTTGACTCCCAGATCAGTCAGAGCCCCTACA...TATACATTCCTCACAAATTATACCTGGGATAAAAACTATGTAGCAGGCAGTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR-3UTR TCA 90 bp CACACTGCCTGCTACATAGTTTTTATCCCAGGTATAATTTGTGAGGAATGTATACCTGGACAGATGAAGTaGGAACTATTTTGGGAAGCA +
Preference number: 2 (lower is better)
Translates to: HTACYIVFIPGIICEECIPGQMK*ELFWEA
Trigger: TGCTTCCCAAAATAGTTCTCACTTCATCTGTCCAGG...TATACATTCCTCACAAATTATACCTGGGATAAAAACTATGTAGCAGGCAGTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR-3UTR GCA 90 bp AAACACACTGCCTGCTACATAGTTTTTATCCCAGGTATAATTTGTGAGGAATGTAGGCTTATCAGTGACTaGAGATTGTTCTCTCCACTG +
Preference number: 2 (lower is better)
Translates to: KHTACYIVFIPGIICEECRLISD*RLFSPL
Trigger: CAGTGGAGAGAACAATCTGCAGTCACTGATAAGCCT...ACATTCCTCACAAATTATACCTGGGATAAAAACTATGTAGCAGGCAGTGTGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR-3UTR CCA 90 bp TTCTGCTCAAAGGGACAATATTCTTGCTGGATGCGTTTCTGTAAATGCTTCACAGGTATCGAAAGAGTCTaGATTTTTAGGGCTCATACT +
Preference number: 2 (lower is better)
Translates to: FCSKGQYSCWMRFCKCFTGIERV*IFRAHT
Trigger: AGTATGAGCCCTAAAAATCCAGACTCTTTCGATACC...TGTGAAGCATTTACAGAAACGCATCCAGCAAGAATATTGTCCCTTTGAGCAGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
3UTR-3UTR CCA 90 bp CTACCTGAATTCCACACTACTCATAATGCTACTGTCATTCGCACCTGTAAAATGGGACAATATTCTTGCTaGATGCGTTTCTGTAAATGC +
Preference number: 2 (lower is better)
Translates to: LPEFHTTHNATVIRTCKMGQYSC*MRFCKC
Trigger: GCATTTACAGAAACGCATCCAGCAAGAATATTGTCC...CATTTTACAGGTGCGAATGACAGTAGCATTATGAGTAGTGTGGAATTCAGGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
3UTR-3UTR CCA 90 bp AAACACACTGCCTGCTACATAGTTTTTATCCCAGGTATAATTTGTGAGGAATGTTTTGGTGTCATCAGCTaGAGTGCAATAGGATGCATC +
Preference number: 2 (lower is better)
Translates to: KHTACYIVFIPGIICEECFGVIS*SAIGCI
Trigger: GATGCATCCTATTGCACTCCAGCTGATGACACCAAA...ACATTCCTCACAAATTATACCTGGGATAAAAACTATGTAGCAGGCAGTGTGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR CAA 90 bp AACAAAGCAGCCAGTTTGTTATTGAGATGTTTTCACATCTGGCTTTaGACACAGATAATTGTCCCACAGCTGGCTCTAGAATTTCAAACA +
Preference number: 2 (lower is better)
Translates to: NKAASLLLRCFHIWL*TQIIVPQLALEFQT
Trigger: TGTTTGAAATTCTAGAGCCAGCTGTGGGACAATTATCTGTGTCAAAAGCCAGATGTGAAAACATCTCAATAACAAACTGGCTGCTTTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344576.6
3UTR CAA 90 bp CACACAGATGTGTATGTCCGTGATTTGCTTCATAAGCTAGAAATTTaGCAGATTCATTCTTACAACAGAGGTACAGCAAACAACCAGACA +
Preference number: 2 (lower is better)
Translates to: HTDVYVRDLLHKLEI*QIHSYNRGTANNQT
Trigger: TGTCTGGTTGTTTGCTGTACCTCTGTTGTAAGAATGAATCTGCAAAATTTCTAGCTTATGAAGCAAATCACGGACATACACATCTGTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
3UTR-3UTR GCA 90 bp AAACACACTGCCTGCTACATAGTTTTTATCCCAGGTATAATTTGTGAGGAATGTAATTTCAACAGGTGTTaGCTACGTGGAATAGCAGCT +
Preference number: 2 (lower is better)
Translates to: KHTACYIVFIPGIICEECNFNRC*LRGIAA
Trigger: AGCTGCTATTCCACGTAGGCAACACCTGTTGAAATT...ACATTCCTCACAAATTATACCTGGGATAAAAACTATGTAGCAGGCAGTGTGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR-3UTR GCA 90 bp AAACACACTGCCTGCTACATAGTTTTTATCCCAGGTATAATTTGTGAGGAATGTAGAATCACATACACCTaGAGAATTTGCCTCCAAGTC +
Preference number: 2 (lower is better)
Translates to: KHTACYIVFIPGIICEECRITYT*RICLQV
Trigger: GACTTGGAGGCAAATTCTGCAGGTGTATGTGATTCT...ACATTCCTCACAAATTATACCTGGGATAAAAACTATGTAGCAGGCAGTGTGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR-3UTR CCA 90 bp CACACTGCCTGCTACATAGTTTTTATCCCAGGTATAATTTGTGAGGAATGTATACAGATGATGAGAGTATaGCATGCAACTGGATTTTTC +
Preference number: 2 (lower is better)
Translates to: HTACYIVFIPGIICEECIQMMRV*HATGFF
Trigger: GAAAAATCCAGTTGCATGCCATACTCTCATCATCTG...TATACATTCCTCACAAATTATACCTGGGATAAAAACTATGTAGCAGGCAGTGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR-3UTR CCA 90 bp CACACTGCCTGCTACATAGTTTTTATCCCAGGTATAATTTGTGAGGAATGTATACGTTTTCTTTCACTGTaGGAAATAAAGGCTACTTGG +
Preference number: 2 (lower is better)
Translates to: HTACYIVFIPGIICEECIRFLSL*EIKATW
Trigger: CCAAGTAGCCTTTATTTCCCACAGTGAAAGAAAACG...TATACATTCCTCACAAATTATACCTGGGATAAAAACTATGTAGCAGGCAGTGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR TCA 72 bp GTGCCCCTGATGCACCTGCACTTTCCACCTCCCCGCTaGCTGAGACCTGGTCATCCTCCTGTGAGGCCTCCC +
Preference number: 3 (lower is better)
Translates to: VPLMHLHFPPPR*LRPGHPPVRPP
Trigger: GGGAGGCCTCACAGGAGGATGACCAGGTCTCAGTCAGCGGGGAGGTGGAAAGTGCAGGTGCATCAGGGGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR CCA 72 bp GCACCTGCACTTTCCACCTCCCCGCTGACTGAGACCTaGTCATCCTCCTGTGAGGCCTCCCTTCCAGGTCTC +
Preference number: 3 (lower is better)
Translates to: APALSTSPLTET*SSSCEASLPGL
Trigger: GAGACCTGGAAGGGAGGCCTCACAGGAGGATGACCAGGTCTCAGTCAGCGGGGAGGTGGAAAGTGCAGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR GCA 72 bp GGCAGGACCCAACCTCCCTGCTCTGTGCTCTCACAGTaGCTGGCTGATGGGTCCTGTCTGGCATTTGTCACG +
Preference number: 3 (lower is better)
Translates to: GRTQPPCSVLSQ*LADGSCLAFVT
Trigger: CGTGACAAATGCCAGACAGGACCCATCAGCCAGGCACTGTGAGAGCACAGAGCAGGGAGGTTGGGTCCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR GCA 72 bp GAGCTAATGCGGGCATGGCTGTTGGGATGGAGGACCTaGTGTGGCTTGGTCCTGGGTATCGAAAGAGTCTGG +
Preference number: 3 (lower is better)
Translates to: ELMRAWLLGWRT*CGLVLGIERVW
Trigger: CCAGACTCTTTCGATACCCAGGACCAAGCCACAGCAGGTCCTCCATCCCAACAGCCATGCCCGCATTAGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
3UTR CCA 72 bp AGAGGGGCAGAAGGAACCAAGGCTAGAAGCATGGACTaGGGCCATGCTAATTACGGAGAAGGCTGGCAGCAT +
Preference number: 3 (lower is better)
Translates to: RGAEGTKARSMD*GHANYGEGWQH
Trigger: ATGCTGCCAGCCTTCTCCGTAATTAGCATGGCCCCAGTCCATGCTTCTAGCCTTGGTTCCTTCTGCCCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344576.6
3UTR-3UTR CAA 90 bp TTGGGCAGCTCCTCTCCTGACCTGCCCATCACAGTCGCCAGATCCGTGAAGAGGTTAGGAGATACGTTTTaGCGAGAACAAAAGCGGTGC +
Preference number: 3 (lower is better)
Translates to: LGSSSPDLPITVARSVKRLGDTF*REQKRC
Trigger: GCACCGCTTTTGTTCTCGCAAAAACGTATCTCCTAA...CCTCTTCACGGATCTGGCGACTGTGATGGGCAGGTCAGGAGAGGAGCTGCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR TCA 72 bp GACAGAGTGGCTTATCCTACTGTACCTGCCATGACTTaGTACAGTACCGATCCGGCCTGCTGGGGCCATGAA +
Preference number: 3 (lower is better)
Translates to: DRVAYPTVPAMT*YSTDPACWGHE
Trigger: TTCATGGCCCCAGCAGGCCGGATCGGTACTGTATCAAGTCATGGCAGGTACAGTAGGATAAGCCACTCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
3UTR GCA 72 bp CAAGCATCCTCTGGAAGACTTGTGGCTTGTGCTCCTTaGTCACAGTTGGGCCTGGATGAACTCAGGGTAGCA +
Preference number: 3 (lower is better)
Translates to: QASSGRLVACAP*SQLGLDELRVA
Trigger: TGCTACCCTGAGTTCATCCAGGCCCAACTGTGAGCAAGGAGCACAAGCCACAAGTCTTCCAGAGGATGCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
3UTR-3UTR CAA 90 bp CAAACAAGTCAGTCTAACGCTCATGACTGGAAACCACTGGTCCATCAGTGGGGAGCTCCTTGCTCACAGTaGGGCCTGGATGAACTCAGG +
Preference number: 3 (lower is better)
Translates to: QTSQSNAHDWKPLVHQWGAPCSQ*GLDELR
Trigger: CCTGAGTTCATCCAGGCCCAACTGTGAGCAAGGAGC...TCCCCACTGATGGACCAGTGGTTTCCAGTCATGAGCGTTAGACTGACTTGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
3UTR TCA 72 bp GACTTGATACAGTACCGATCCGGCCTGCTGGGGCCATaGAGGCCTTCTTGGATCTTTAGTGTTTTGCAGTGG +
Preference number: 3 (lower is better)
Translates to: DLIQYRSGLLGP*RPSWIFSVLQW
Trigger: CCACTGCAAAACACTAAAGATCCAAGAAGGCCTTCATGGCCCCAGCAGGCCGGATCGGTACTGTATCAAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
3UTR CCA 72 bp GGCTGTTGGGATGGAGGACCTGCTGTGGCTTGGTCCTaGGTATCGAAAGAGTCTGGATTTTTAGGGCTCATA +
Preference number: 3 (lower is better)
Translates to: GCWDGGPAVAWS*VSKESGFLGLI
Trigger: TATGAGCCCTAAAAATCCAGACTCTTTCGATACCCAGGACCAAGCCACAGCAGGTCCTCCATCCCAACAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
3UTR CCA 72 bp AGAACCACTGGAATCAAGCATCCTCTGGAAGACTTGTaGCTTGTGCTCCTTGCTCACAGTTGGGCCTGGATG +
Preference number: 3 (lower is better)
Translates to: RTTGIKHPLEDL*LVLLAHSWAWM
Trigger: CATCCAGGCCCAACTGTGAGCAAGGAGCACAAGCCACAAGTCTTCCAGAGGATGCTTGATTCCAGTGGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
3UTR CCA 72 bp TTTAGGGAACTTGTGGGATGCTCCAAGCTCATCCCCTaGCTTAGAGGGAGCAGGTTGTTTAGGGTGACTGAC +
Preference number: 3 (lower is better)
Translates to: FRELVGCSKLIP*LRGSRLFRVTD
Trigger: GTCAGTCACCCTAAACAACCTGCTCCCTCTAAGCCAGGGGATGAGCTTGGAGCATCCCACAAGTTCCCTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR-3UTR CAA 90 bp CAGCTGTGGGCTATTGGTCCAAATGCTGATGAATCCAATGTGGGCTGGAATCCGCATCCTCTGGAAGACTaGTGGCTTGTGCTCCTTGCT +
Preference number: 3 (lower is better)
Translates to: QLWAIGPNADESNVGWNPHPLED*WLVLLA
Trigger: AGCAAGGAGCACAAGCCACAAGTCTTCCAGAGGATG...CGGATTCCAGCCCACATTGGATTCATCAGCATTTGGACCAATAGCCCACAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
3UTR-3UTR CAA 90 bp GAATTTGCCTCCAAGTCCATGTCCTTGTGGCTAATCCCTAGGCCAGTAGTTCTCCTTAGAGGGAGCAGGTaGTTTAGGGTGACTGACCTC +
Preference number: 3 (lower is better)
Translates to: EFASKSMSLWLIPRPVVLLRGSR*FRVTDL
Trigger: GAGGTCAGTCACCCTAAACAACCTGCTCCCTCTAAG...GAGAACTACTGGCCTAGGGATTAGCCACAAGGACATGGACTTGGAGGCAAATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR GCA 72 bp CTAAGCTTTGGTGTCATCAGCTGGAGTGCAATAGGATaGATCCACAGTGCTCCCCCTTACAACCTGGACTCA +
Preference number: 3 (lower is better)
Translates to: LSFGVISWSAIG*IHSAPPYNLDS
Trigger: TGAGTCCAGGTTGTAAGGGGGAGCACTGTGGATGCATCCTATTGCACTCCAGCTGATGACACCAAAGCTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR-3UTR CAA 90 bp TTTGATGTGTCATCCTCTCTTGCTGATTTCATGACAGCAAGACAGGGGCAGCATAGGACCTGCTGTGGCTaGGTCCTGGGTATCGAAAGA +
Preference number: 3 (lower is better)
Translates to: FDVSSSLADFMTARQGQHRTCCG*VLGIER
Trigger: TCTTTCGATACCCAGGACCAAGCCACAGCAGGTCCT...ATGCTGCCCCTGTCTTGCTGTCATGAAATCAGCAAGAGAGGATGACACATCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
3UTR-3UTR CAA 90 bp CAGCTGTGGGCTATTGGTCCAAATGCTGATGAATCCAATGTGGGCTGGAATCCGCAGCAAGCTTCTTCCTaGTTGGAAGAGCCCATTGAA +
Preference number: 3 (lower is better)
Translates to: QLWAIGPNADESNVGWNPQQASS*LEEPIE
Trigger: TTCAATGGGCTCTTCCAACAAGGAAGAAGCTTGCTG...CGGATTCCAGCCCACATTGGATTCATCAGCATTTGGACCAATAGCCCACAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
3UTR-3UTR CAA 90 bp ATAACTTACTTAGAGAATGCAGAGGGTCCCAGGGCGTTTTCAAAGCTCAGGTGGAAGAGGCTAAGGGCTTaGCGGCTTCTACCAGACAGA +
Preference number: 3 (lower is better)
Translates to: ITYLENAEGPRAFSKLRWKRLRA*RLLPDR
Trigger: TCTGTCTGGTAGAAGCCGCAAAGCCCTTAGCCTCTT...CCACCTGAGCTTTGAAAACGCCCTGGGACCCTCTGCATTCTCTAAGTAAGTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR-3UTR CAA 90 bp ATTGGAATGACCTCAGGAGCTTTAAAAACTACGAATGCTTGGGTTTCAGCCCCATGGCTGGGCCCAGGCTaGGTAAGACTGTTGGTGAAC +
Preference number: 3 (lower is better)
Translates to: IGMTSGALKTTNAWVSAPWLGPG*VRLLVN
Trigger: GTTCACCAACAGTCTTACCAAGCCTGGGCCCAGCCA...TGGGGCTGAAACCCAAGCATTCGTAGTTTTTAAAGCTCCTGAGGTCATTCCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR TCA 72 bp AACTTTGATGAATGTTGCAATAACCAGGGGGTGCTCTaGAAAGGCCCTACGGCTGGGCTGCACCTGAGAAAA +
Preference number: 3 (lower is better)
Translates to: NFDECCNNQGVL*KGPTAGLHLRK
Trigger: TTTTCTCAGGTGCAGCCCAGCCGTAGGGCCTTTTCAGAGCACCCCCTGGTTATTGCAACATTCATCAAAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR GCA 72 bp TGTCATCAGCTGGAGTGCAATAGGATGCATCCACAGTaGTCCCCCTTACAACCTGGACTCACAGCGAATATA +
Preference number: 3 (lower is better)
Translates to: CHQLECNRMHPQ*SPLQPGLTANI
Trigger: TATATTCGCTGTGAGTCCAGGTTGTAAGGGGGAGCACTGTGGATGCATCCTATTGCACTCCAGCTGATGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR GCA 72 bp CAGCAAACACCTAAGCTTTGGTGTCATCAGCTGGAGTaGAATAGGATGCATCCACAGTGCTCCCCCTTACAA +
Preference number: 3 (lower is better)
Translates to: QQTPKLWCHQLE*NRMHPQCSPLQ
Trigger: TTGTAAGGGGGAGCACTGTGGATGCATCCTATTGCACTCCAGCTGATGACACCAAAGCTTAGGTGTTTGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR CCA 72 bp GACAAAGGAATGCAACTTCCCAAAATGTGCCCGAGGTaGAAGTACTTCCTGGCTAGTCGGTGTAAACGTTGC +
Preference number: 3 (lower is better)
Translates to: DKGMQLPKMCPR*KYFLASRCKRC
Trigger: GCAACGTTTACACCGACTAGCCAGGAAGTACTTCCACCTCGGGCACATTTTGGGAAGTTGCATTCCTTTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
3UTR CCA 72 bp AGCCTTGAAGCAGAACCACTGGAATCAAGCATCCTCTaGAAGACTTGTGGCTTGTGCTCCTTGCTCACAGTT +
Preference number: 3 (lower is better)
Translates to: SLEAEPLESSIL*KTCGLCSLLTV
Trigger: AACTGTGAGCAAGGAGCACAAGCCACAAGTCTTCCAGAGGATGCTTGATTCCAGTGGTTCTGCTTCAAGGCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
3UTR CCA 72 bp GCTTTGCGGCTTCTACCAGACAGAACTGTGCCTCCCTaGACAGATGAAGTGAGAACTATTTTGGGAAGCACA +
Preference number: 3 (lower is better)
Translates to: ALRLLPDRTVPP*TDEVRTILGST
Trigger: TGTGCTTCCCAAAATAGTTCTCACTTCATCTGTCCAGGGAGGCACAGTTCTGTCTGGTAGAAGCCGCAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR CCA 72 bp ACTTTCAGCAAACACCTAAGCTTTGGTGTCATCAGCTaGAGTGCAATAGGATGCATCCACAGTGCTCCCCCT +
Preference number: 3 (lower is better)
Translates to: TFSKHLSFGVIS*SAIGCIHSAPP
Trigger: AGGGGGAGCACTGTGGATGCATCCTATTGCACTCCAGCTGATGACACCAAAGCTTAGGTGTTTGCTGAAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR-3UTR CAA 90 bp CCCTTTCCATTAACACTGCCCCAACAGAACCTGCCTCAGACCAAGCTAAATGTGCAGCAAGCTTCTTCCTaGTTGGAAGAGCCCATTGAA +
Preference number: 3 (lower is better)
Translates to: PFPLTLPQQNLPQTKLNVQQASS*LEEPIE
Trigger: TTCAATGGGCTCTTCCAACAAGGAAGAAGCTTGCTG...CACATTTAGCTTGGTCTGAGGCAGGTTCTGTTGGGGCAGTGTTAATGGAAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR-3UTR CAA 90 bp AGTCACAACATCAAGAACTTTCAGCAAACACCTAAGCTTTGGTGTCATCAGCTGTGTGGCTTGTGCTCCTaGCTCACAGTTGGGCCTGGA +
Preference number: 3 (lower is better)
Translates to: SHNIKNFQQTPKLWCHQLCGLCS*LTVGPG
Trigger: TCCAGGCCCAACTGTGAGCAAGGAGCACAAGCCACA...CAGCTGATGACACCAAAGCTTAGGTGTTTGCTGAAAGTTCTTGATGTTGTGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR-3UTR CAA 90 bp CCTCAAATTAGGAGATACGTTTTTGCGAGAACAAAAGCGGTGCTATCCTTAGGTTGTGGCTTGTGCTCCTaGCTCACAGTTGGGCCTGGA +
Preference number: 3 (lower is better)
Translates to: PQIRRYVFARTKAVLSLGCGLCS*LTVGPG
Trigger: TCCAGGCCCAACTGTGAGCAAGGAGCACAAGCCACA...ACCTAAGGATAGCACCGCTTTTGTTCTCGCAAAAACGTATCTCCTAATTTGAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
3UTR GCA 72 bp CAGTTTGAAGACAAAGGAATGCAACTTCCCAAAATGTaGCCGAGGTGGAAGTACTTCCTGGCTAGTCGGTGT +
Preference number: 3 (lower is better)
Translates to: QFEDKGMQLPKM*PRWKYFLASRC
Trigger: ACACCGACTAGCCAGGAAGTACTTCCACCTCGGGCACATTTTGGGAAGTTGCATTCCTTTGTCTTCAAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
3UTR GCA 72 bp TGCAGAGTAGACATTGAGGGCAATTTCAACAGGTGTTaGCTACGTGGAATAGCAGCTCACTCACAAAGGAGG +
Preference number: 3 (lower is better)
Translates to: CRVDIEGNFNRC*LRGIAAHSQRR
Trigger: CCTCCTTTGTGAGTGAGCTGCTATTCCACGTAGGCAACACCTGTTGAAATTGCCCTCAATGTCTACTCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR GCA 72 bp TGTCTTAGCTCTCTAGGCCTGAGAATCACATACACCTaGAGAATTTGCCTCCAAGTCCATGTCCTTGTGGCT +
Preference number: 3 (lower is better)
Translates to: CLSSLGLRITYT*RICLQVHVLVA
Trigger: AGCCACAAGGACATGGACTTGGAGGCAAATTCTGCAGGTGTATGTGATTCTCAGGCCTAGAGAGCTAAGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR CCA 72 bp AACTTCCCAAAATGTGCCCGAGGTGGAAGTACTTCCTaGCTAGTCGGTGTAAACGTTGCAAAACCAGTCTGT +
Preference number: 3 (lower is better)
Translates to: NFPKCARGGSTS*LVGVNVAKPVC
Trigger: ACAGACTGGTTTTGCAACGTTTACACCGACTAGCCAGGAAGTACTTCCACCTCGGGCACATTTTGGGAAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
3UTR CCA 72 bp CTGTGCTCTCACAGTGCCTGGCTGATGGGTCCTGTCTaGCATTTGTCACGTTGTTTTAAGGTTAGCATCTAT +
Preference number: 3 (lower is better)
Translates to: LCSHSAWLMGPV*HLSRCFKVSIY
Trigger: ATAGATGCTAACCTTAAAACAACGTGACAAATGCCAGACAGGACCCATCAGCCAGGCACTGTGAGAGCACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR CCA 72 bp AACTCTGTTCAGGTTCTTGACTCTCAGCGACAGATGTaGAGGTCTTTGTGTCTTAGCTCTCTAGGCCTGAGA +
Preference number: 3 (lower is better)
Translates to: NSVQVLDSQRQM*RSLCLSSLGLR
Trigger: TCTCAGGCCTAGAGAGCTAAGACACAAAGACCTCCACATCTGTCGCTGAGAGTCAAGAACCTGAACAGAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR-3UTR CAA 90 bp TGCAGTGGAAGCCTTGAAGCAGAACCACTGGAATCAAGCATCCTCTGGAAGACTCAAGCTTCTTCCTTGTaGGAAGAGCCCATTGAAGTA +
Preference number: 3 (lower is better)
Translates to: CSGSLEAEPLESSILWKTQASSL*EEPIEV
Trigger: TACTTCAATGGGCTCTTCCAACAAGGAAGAAGCTTG...AGTCTTCCAGAGGATGCTTGATTCCAGTGGTTCTGCTTCAAGGCTTCCACTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
3UTR-3UTR CAA 90 bp GAATTTGCCTCCAAGTCCATGTCCTTGTGGCTAATCCCTAGGCCAGTAGTTCTCGGGTTTCAACCCTGGTaGCCCATTAGAATCATGAAA +
Preference number: 3 (lower is better)
Translates to: EFASKSMSLWLIPRPVVLGFQPW*PIRIMK
Trigger: TTTCATGATTCTAATGGGCAACCAGGGTTGAAACCC...GAGAACTACTGGCCTAGGGATTAGCCACAAGGACATGGACTTGGAGGCAAATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR-3UTR CAA 90 bp CTAGCATTGAACAAAGCAGCCAGTTTGTTATTGAGATGTTTTCACATCTGGCTTATGGGTAGGATACTCTaGGGAACCTGGCGGCCCACG +
Preference number: 3 (lower is better)
Translates to: LALNKAASLLLRCFHIWLMGRIL*GTWRPT
Trigger: CGTGGGCCGCCAGGTTCCCAAGAGTATCCTACCCAT...AAGCCAGATGTGAAAACATCTCAATAACAAACTGGCTGCTTTGTTCAATGCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000344576.6
3UTR TCA 72 bp CCTGCCTCATCGATCATCTGCTTCTTGACACATAAGTaGCAGCAGAATGTAGGTCCTTCTGTTTCCCAGTTC +
Preference number: 3 (lower is better)
Translates to: PASSIICFLTHK*QQNVGPSVSQF
Trigger: GAACTGGGAAACAGAAGGACCTACATTCTGCTGTCACTTATGTGTCAAGAAGCAGATGATCGATGAGGCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR TCA 72 bp ACCTTCAGGGATGGAGTCCAAGCTTTGAGTACTGACTaGTCAGGGCTGTTAGGTGAAAATCATGGGACTTTG +
Preference number: 3 (lower is better)
Translates to: TFRDGVQALSTD*SGLLGENHGTL
Trigger: CAAAGTCCCATGATTTTCACCTAACAGCCCTGATCAGTCAGTACTCAAAGCTTGGACTCCATCCCTGAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR TCA 72 bp GCTAAGCAATCCATAGTCCCCTTATGTCTGCAGTTGTaGGGCAGGGGTGGTAAGTCACAACATCAAGAACTT +
Preference number: 3 (lower is better)
Translates to: AKQSIVPLCLQL*GRGGKSQHQEL
Trigger: AAGTTCTTGATGTTGTGACTTACCACCCCTGCCTCACAACTGCAGACATAAGGGGACTATGGATTGCTTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR TCA 72 bp ACAAAGCTGTACCCCTGGTATGGCAGGTGTGGCTGGTaGAAGAGGCAAGGATTTCTGTTCTGTAAGGTTTTA +
Preference number: 3 (lower is better)
Translates to: TKLYPWYGRCGW*KRQGFLFCKVL
Trigger: TAAAACCTTACAGAACAGAAATCCTTGCCTCTTTCACCAGCCACACCTGCCATACCAGGGGTACAGCTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR TCA 72 bp CTTGGAGAACCTTCATGGAAACTCTGTTCAGGTTCTTaGCTCTCAGCGACAGATGTGGAGGTCTTTGTGTCT +
Preference number: 3 (lower is better)
Translates to: LGEPSWKLCSGS*LSATDVEVFVS
Trigger: AGACACAAAGACCTCCACATCTGTCGCTGAGAGTCAAGAACCTGAACAGAGTTTCCATGAAGGTTCTCCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR GCA 72 bp TCAGGCTTATCAGTGACTGCAGATTGTTCTCTCCACTaGACATGGGAATCTCTACCCTACCCAGCCTTTTAT +
Preference number: 3 (lower is better)
Translates to: SGLSVTADCSLH*TWESLPYPAFY
Trigger: ATAAAAGGCTGGGTAGGGTAGAGATTCCCATGTGCAGTGGAGAGAACAATCTGCAGTCACTGATAAGCCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR GCA 72 bp AGGGAAGAGACTGGTTTCTATAACTTACTTAGAGAATaGAGAGGGTCCCAGGGCGTTTTCAAAGCTCAGGTG +
Preference number: 3 (lower is better)
Translates to: REETGFYNLLRE*RGSQGVFKAQV
Trigger: CACCTGAGCTTTGAAAACGCCCTGGGACCCTCTGCATTCTCTAAGTAAGTTATAGAAACCAGTCTCTTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR CCA 72 bp AATGGAAGACAAACAAGTCAGTCTAACGCTCATGACTaGAAACCACTGGTCCATCAGTGGGGAGTAAGTACC +
Preference number: 3 (lower is better)
Translates to: NGRQTSQSNAHD*KPLVHQWGVST
Trigger: GGTACTTACTCCCCACTGATGGACCAGTGGTTTCCAGTCATGAGCGTTAGACTGACTTGTTTGTCTTCCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
3UTR-3UTR CAA 90 bp AAACACACTGCCTGCTACATAGTTTTTATCCCAGGTATAATTTGTGAGGAATGTGCTCCTTGCTCACAGTaGGGCCTGGATGAACTCAGG +
Preference number: 3 (lower is better)
Translates to: KHTACYIVFIPGIICEECAPCSQ*GLDELR
Trigger: CCTGAGTTCATCCAGGCCCAACTGTGAGCAAGGAGC...ACATTCCTCACAAATTATACCTGGGATAAAAACTATGTAGCAGGCAGTGTGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR-3UTR CAA 90 bp AAACACACTGCCTGCTACATAGTTTTTATCCCAGGTATAATTTGTGAGGAATGTAGGACCTGCTGTGGCTaGGTCCTGGGTATCGAAAGA +
Preference number: 3 (lower is better)
Translates to: KHTACYIVFIPGIICEECRTCCG*VLGIER
Trigger: TCTTTCGATACCCAGGACCAAGCCACAGCAGGTCCT...ACATTCCTCACAAATTATACCTGGGATAAAAACTATGTAGCAGGCAGTGTGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR-3UTR CAA 90 bp CTTAGAGGGAGCAGGTTGTTTAGGGTGACTGACCTCAGCCTTATGTGGACTTTATTCTTCCTTGATAAATaGGATGGGGTGGATATTGAC +
Preference number: 3 (lower is better)
Translates to: LRGSRLFRVTDLSLMWTLFFLDK*DGVDID
Trigger: GTCAATATCCACCCCATCCAATTTATCAAGGAAGAA...TAAAGTCCACATAAGGCTGAGGTCAGTCACCCTAAACAACCTGCTCCCTCTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR TCA 72 bp GCTTCTACCAGACAGAACTGTGCCTCCCTGGACAGATaGAGTGAGAACTATTTTGGGAAGCACAATCTTAAA +
Preference number: 3 (lower is better)
Translates to: ASTRQNCASLDR*SENYFGKHNLK
Trigger: TTTAAGATTGTGCTTCCCAAAATAGTTCTCACTTCATCTGTCCAGGGAGGCACAGTTCTGTCTGGTAGAAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR CCA 72 bp CACAACATCAAGAACTTTCAGCAAACACCTAAGCTTTaGTGTCATCAGCTGGAGTGCAATAGGATGCATCCA +
Preference number: 3 (lower is better)
Translates to: HNIKNFQQTPKL*CHQLECNRMHP
Trigger: TGGATGCATCCTATTGCACTCCAGCTGATGACACCAAAGCTTAGGTGTTTGCTGAAAGTTCTTGATGTTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR TCA 72 bp TCTTGCTGGATGCGTTTCTGTAAATGCTTCACAGTTTaGAGACAAAGGAATGCAACTTCCCAAAATGTGCCC +
Preference number: 3 (lower is better)
Translates to: SCWMRFCKCFTV*RQRNATSQNVP
Trigger: GGGCACATTTTGGGAAGTTGCATTCCTTTGTCTTCAAACTGTGAAGCATTTACAGAAACGCATCCAGCAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
3UTR GCA 72 bp CATTGGAATGACCTCAGGAGCTTTAAAAACTACGAATaGTTGGGTTTCAGCCCCAGAGATTTGCGTTTAATC +
Preference number: 3 (lower is better)
Translates to: HWNDLRSFKNYE*LGFSPRDLRLI
Trigger: GATTAAACGCAAATCTCTGGGGCTGAAACCCAAGCATTCGTAGTTTTTAAAGCTCCTGAGGTCATTCCAATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR CCA 72 bp GCTATTGGTCCAAATGCTGATGAATCCAATGTGGGCTaGAATCCGAGTTATTATTTGATGTGTCATCCTCTC +
Preference number: 3 (lower is better)
Translates to: AIGPNADESNVG*NPSYYLMCHPL
Trigger: GAGAGGATGACACATCAAATAATAACTCGGATTCCAGCCCACATTGGATTCATCAGCATTTGGACCAATAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
3UTR CCA 72 bp TTCAACCATTGTTTAGACACTCTCCCTTCTAGTGCTTaGAGAACCTTCATGGAAACTCTGTTCAGGTTCTTG +
Preference number: 3 (lower is better)
Translates to: FNHCLDTLPSSA*RTFMETLFRFL
Trigger: CAAGAACCTGAACAGAGTTTCCATGAAGGTTCTCCAAGCACTAGAAGGGAGAGTGTCTAAACAATGGTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR-3UTR CAA 90 bp CACACTGCCTGCTACATAGTTTTTATCCCAGGTATAATTTGTGAGGAATGTATACCACAGTCTTTCTGGTaGGGACCAGAAGATTCCCAA +
Preference number: 3 (lower is better)
Translates to: HTACYIVFIPGIICEECIPQSFW*GPEDSQ
Trigger: TTGGGAATCTTCTGGTCCCAACCAGAAAGACTGTGG...TATACATTCCTCACAAATTATACCTGGGATAAAAACTATGTAGCAGGCAGTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR-3UTR CAA 90 bp CACACTGCCTGCTACATAGTTTTTATCCCAGGTATAATTTGTGAGGAATGTATACAGATGTGGAGGTCTTaGTGTCTTAGCTCTCTAGGC +
Preference number: 3 (lower is better)
Translates to: HTACYIVFIPGIICEECIQMWRS*CLSSLG
Trigger: GCCTAGAGAGCTAAGACACAAAGACCTCCACATCTG...TATACATTCCTCACAAATTATACCTGGGATAAAAACTATGTAGCAGGCAGTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR-3UTR CAA 90 bp GTCAAGATAGAGCCAGCAGAGAGAACAGGGATCAAATCTGTCACAAACACACACGTGTATGTCCGTGATTaGCTTCATAAGCTAGAAATT +
Preference number: 3 (lower is better)
Translates to: VKIEPAERTGIKSVTNTHVYVRD*LHKLEI
Trigger: AATTTCTAGCTTATGAAGCAAATCACGGACATACAC...GTGTGTGTTTGTGACAGATTTGATCCCTGTTCTCTCTGCTGGCTCTATCTTGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
3UTR TCA 72 bp ATACACACACACACATACACAGATGTACACACATCATaGACACTCACACACACAGATGTGTATGTCCGTGAT +
Preference number: 3 (lower is better)
Translates to: IHTHTYTDVHTS*TLTHTDVYVRD
Trigger: ATCACGGACATACACATCTGTGTGTGTGAGTGTTCATGATGTGTGTACATCTGTGTATGTGTGTGTGTGTAT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
3UTR CCA 72 bp AAAGCAGCCAGTTTGTTATTGAGATGTTTTCACATCTaGCTTTTGACACAGATAATTGTCCCACAGCTGGCT +
Preference number: 3 (lower is better)
Translates to: KAASLLLRCFHI*LLTQIIVPQLA
Trigger: AGCCAGCTGTGGGACAATTATCTGTGTCAAAAGCCAGATGTGAAAACATCTCAATAACAAACTGGCTGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000344576.6
3UTR-3UTR CAA 90 bp CACACTGCCTGCTACATAGTTTTTATCCCAGGTATAATTTGTGAGGAATGTATACAATTTCAACAGGTGTaGCCTACGTGGAATAGCAGC +
Preference number: 3 (lower is better)
Translates to: HTACYIVFIPGIICEECIQFQQV*PTWNSS
Trigger: GCTGCTATTCCACGTAGGCAACACCTGTTGAAATTG...TATACATTCCTCACAAATTATACCTGGGATAAAAACTATGTAGCAGGCAGTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR TCA 72 bp TATTATTTGATGTGTCATCCTCTCTTGCTGATTTCATaGCAGCAAGACAGGGGCAGCATACTGAGTTTCAAA +
Preference number: 3 (lower is better)
Translates to: YYLMCHPLLLIS*QQDRGSILSFK
Trigger: TTTGAAACTCAGTATGCTGCCCCTGTCTTGCTGTCATGAAATCAGCAAGAGAGGATGACACATCAAATAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp TTGGGCAGCTCCTCTCCTGACCTGCCCATCACAGTCGCCAGATCCGTGAAGAGGAGCAGGCGGCACACGTaGGGGTTGTCCACGCTGGCC +
Preference number: 4 (lower is better)
Translates to: LGSSSPDLPITVARSVKRSRRHT*GLSTLA
Trigger: GGCCAGCGTGGACAACCCCCACGTGTGCCGCCTGCT...CCTCTTCACGGATCTGGCGACTGTGATGGGCAGGTCAGGAGAGGAGCTGCCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR TCA 90 bp GTGAAGAGGCTAAGGGCTTTGCGGCTTCTACCAGACAGAACTGTGCCTCCCTGGGGGCAGGGTTGTTGCTaGACCGCACGGCGCCATGCA +
Preference number: 4 (lower is better)
Translates to: VKRLRALRLLPDRTVPPWGQGCC*TARRHA
Trigger: TGCATGGCGCCGTGCGGTTCAGCAACAACCCTGCCC...CCAGGGAGGCACAGTTCTGTCTGGTAGAAGCCGCAAAGCCCTTAGCCTCTTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CCA 90 bp TGGAGGACCTGCTGTGGCTTGGTCCTGGGTATCGAAAGAGTCTGGATTTTTAGGCGTGCGCGGTGGTTGTaGCGTTGGCGGCGAGGCGGG +
Preference number: 4 (lower is better)
Translates to: WRTCCGLVLGIERVWIFRRARWL*RWRRGG
Trigger: CCCGCCTCGCCGCCAACGCCACAACCACCGCGCACG...CCTAAAAATCCAGACTCTTTCGATACCCAGGACCAAGCCACAGCAGGTCCTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp TGCAACTTCCCAAAATGTGCCCGAGGTGGAAGTACTTCCTGGCTAGTCGGTGTACGTGCGCGGTGGTTGTaGCGTTGGCGGCGAGGCGGG +
Preference number: 4 (lower is better)
Translates to: CNFPKCARGGSTSWLVGVRARWL*RWRRGG
Trigger: CCCGCCTCGCCGCCAACGCCACAACCACCGCGCACG...TACACCGACTAGCCAGGAAGTACTTCCACCTCGGGCACATTTTGGGAAGTTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp CCAAAATGTGCCCGAGGTGGAAGTACTTCCTGGCTAGTCGGTGTAAACGTTGCAGGGGGCCGTGCGCGGTaGTTGTGGCGTTGGCGGCGA +
Preference number: 4 (lower is better)
Translates to: PKCARGGSTSWLVGVNVAGGRAR*LWRWRR
Trigger: TCGCCGCCAACGCCACAACCACCGCGCACGGCCCCC...TGCAACGTTTACACCGACTAGCCAGGAAGTACTTCCACCTCGGGCACATTTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp CCGCCCTTGAGAACCAGTGCCTTTCCTGCTAAGCAATCCATAGTCCCCTTATGTCGGACGCCGACGAGGTaGCCTGTCGTCCGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: PPLRTSAFPAKQSIVPLCRTPTR*PVVRSG
Trigger: CCCAGACCGGACGACAGGCCACCTCGTCGGCGTCCG...ACATAAGGGGACTATGGATTGCTTAGCAGGAAAGGCACTGGTTCTCAAGGGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CCA 90 bp TGGAGGACCTGCTGTGGCTTGGTCCTGGGTATCGAAAGAGTCTGGATTTTTAGGCGGACGCCGACGAGGTaGCCTGTCGTCCGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: WRTCCGLVLGIERVWIFRRTPTR*PVVRSG
Trigger: CCCAGACCGGACGACAGGCCACCTCGTCGGCGTCCG...CCTAAAAATCCAGACTCTTTCGATACCCAGGACCAAGCCACAGCAGGTCCTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp TTGGGCAGCTCCTCTCCTGACCTGCCCATCACAGTCGCCAGATCCGTGAAGAGGGGCAGACCTGGCCTGTaGCCTTGCAGCTGTTTTCAC +
Preference number: 4 (lower is better)
Translates to: LGSSSPDLPITVARSVKRGRPGL*PCSCFH
Trigger: GTGAAAACAGCTGCAAGGCCACAGGCCAGGTCTGCC...CCTCTTCACGGATCTGGCGACTGTGATGGGCAGGTCAGGAGAGGAGCTGCCCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR TCA 90 bp CCAAAATGTGCCCGAGGTGGAAGTACTTCCTGGCTAGTCGGTGTAAACGTTGCACTGCCGGGCAGGTCTTaGCGCAGTGGGGGCCGTCAA +
Preference number: 4 (lower is better)
Translates to: PKCARGGSTSWLVGVNVALPGRS*RSGGRQ
Trigger: TTGACGGCCCCCACTGCGTCAAGACCTGCCCGGCAG...TGCAACGTTTACACCGACTAGCCAGGAAGTACTTCCACCTCGGGCACATTTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp TGCAACTTCCCAAAATGTGCCCGAGGTGGAAGTACTTCCTGGCTAGTCGGTGTAAGTCACTGGGGGACTTaGCACGGCAGCGCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: CNFPKCARGGSTSWLVGVSHWGT*HGSARS
Trigger: GCTCCGGGCGCTGCCGTGGCAAGTCCCCCAGTGACT...TACACCGACTAGCCAGGAAGTACTTCCACCTCGGGCACATTTTGGGAAGTTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp TGCAACTTCCCAAAATGTGCCCGAGGTGGAAGTACTTCCTGGCTAGTCGGTGTAGCTGCCAGGTCGCGGTaGACCAAGCGACGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: CNFPKCARGGSTSWLVGVAARSR*TKRRSS
Trigger: GGAGGACCGTCGCTTGGTGCACCGCGACCTGGCAGC...TACACCGACTAGCCAGGAAGTACTTCCACCTCGGGCACATTTTGGGAAGTTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp CACAACAAAGAGCTTGTGCAGGCTCGGTCATGTGTTTATCTGCTCCTTACGCCCGCTGCCAGGTCGCGGTaGACCAAGCGACGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: HNKELVQARSCVYLLLTPAARSR*TKRRSS
Trigger: GGAGGACCGTCGCTTGGTGCACCGCGACCTGGCAGC...GGGCGTAAGGAGCAGATAAACACATGACCGAGCCTGCACAAGCTCTTTGTTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CCA 90 bp TTGGGCAGCTCCTCTCCTGACCTGCCCATCACAGTCGCCAGATCCGTGAAGAGGGTTGTAGAGCATGAGTaGGGGGCAGGTGTCCTTGCA +
Preference number: 4 (lower is better)
Translates to: LGSSSPDLPITVARSVKRVVEHE*GAGVLA
Trigger: TGCAAGGACACCTGCCCCCCACTCATGCTCTACAAC...CCTCTTCACGGATCTGGCGACTGTGATGGGCAGGTCAGGAGAGGAGCTGCCCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CCA 90 bp CACAACAAAGAGCTTGTGCAGGCTCGGTCATGTGTTTATCTGCTCCTTACGCCCAGCAGGCGGCACACGTaGGGGTTGTCCACGCTGGCC +
Preference number: 4 (lower is better)
Translates to: HNKELVQARSCVYLLLTPSRRHT*GLSTLA
Trigger: GGCCAGCGTGGACAACCCCCACGTGTGCCGCCTGCT...GGGCGTAAGGAGCAGATAAACACATGACCGAGCCTGCACAAGCTCTTTGTTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CCA 90 bp TTGGGCAGCTCCTCTCCTGACCTGCCCATCACAGTCGCCAGATCCGTGAAGAGGCTGGTATGGCAGGTGTaGCTGGTGAAAGAGGCAAGG +
Preference number: 4 (lower is better)
Translates to: LGSSSPDLPITVARSVKRLVWQV*LVKEAR
Trigger: CCTTGCCTCTTTCACCAGCCACACCTGCCATACCAG...CCTCTTCACGGATCTGGCGACTGTGATGGGCAGGTCAGGAGAGGAGCTGCCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR TCA 90 bp GTGAAGAGGCTAAGGGCTTTGCGGCTTCTACCAGACAGAACTGTGCCTCCCTGGCGGCTGGGCTGCACCTaGGAAAATCAAGCCACAGTC +
Preference number: 4 (lower is better)
Translates to: VKRLRALRLLPDRTVPPWRLGCT*ENQATV
Trigger: GACTGTGGCTTGATTTTCTCAGGTGCAGCCCAGCCG...CCAGGGAGGCACAGTTCTGTCTGGTAGAAGCCGCAAAGCCCTTAGCCTCTTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR GCA 90 bp CAAACAAGTCAGTCTAACGCTCATGACTGGAAACCACTGGTCCATCAGTGGGGAGGAGTCAGGGGGCCGTaGGCGGTGGTTGTGGCGTTG +
Preference number: 4 (lower is better)
Translates to: QTSQSNAHDWKPLVHQWGGVRGP*AVVVAL
Trigger: CAACGCCACAACCACCGCGCACGGCCCCCTGACTCC...TCCCCACTGATGGACCAGTGGTTTCCAGTCATGAGCGTTAGACTGACTTGTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp TGGAGGACCTGCTGTGGCTTGGTCCTGGGTATCGAAAGAGTCTGGATTTTTAGGGGAGGGTCGCATCGCTaGTCCCCGAAGAGCTCGCTC +
Preference number: 4 (lower is better)
Translates to: WRTCCGLVLGIERVWIFRGGSHR*SPKSSL
Trigger: GAGCGAGCTCTTCGGGGAGCAGCGATGCGACCCTCC...CCTAAAAATCCAGACTCTTTCGATACCCAGGACCAAGCCACAGCAGGTCCTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp AGGGCTTTGCGGCTTCTACCAGACAGAACTGTGCCTCCCTGGACAGATGAAGTGCACATGGCCGGCGTCTaGGTACTTCCAGACCAGGGT +
Preference number: 4 (lower is better)
Translates to: RALRLLPDRTVPPWTDEVHMAGV*VLPDQG
Trigger: ACCCTGGTCTGGAAGTACGCAGACGCCGGCCATGTG...CACTTCATCTGTCCAGGGAGGCACAGTTCTGTCTGGTAGAAGCCGCAAAGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR GCA 90 bp AGTCTAAGGAAGAATTCCATCCCCTCCGTTTCTTCTTTGCCCAGGAAGGGACAGGCTGCCAGGTCGCGGTaGACCAAGCGACGGTCCTCC +
Preference number: 4 (lower is better)
Translates to: SLRKNSIPSVSSLPRKGQAARSR*TKRRSS
Trigger: GGAGGACCGTCGCTTGGTGCACCGCGACCTGGCAGC...CTGTCCCTTCCTGGGCAAAGAAGAAACGGAGGGGATGGAATTCTTCCTTAGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp TGCAACTTCCCAAAATGTGCCCGAGGTGGAAGTACTTCCTGGCTAGTCGGTGTACTCGGGGTTGCCCACTaGAGTGCTGTGGGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: CNFPKCARGGSTSWLVGVLGVAH*SAVGVL
Trigger: CAGGACCCCCACAGCACTGCAGTGGGCAACCCCGAG...TACACCGACTAGCCAGGAAGTACTTCCACCTCGGGCACATTTTGGGAAGTTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp CCTGCTGTGGCTTGGTCCTGGGTATCGAAAGAGTCTGGATTTTTAGGGCTCATAGGGGTCCTGGTAGTGTaGGTCTCTGCTGGGCGCGGG +
Preference number: 4 (lower is better)
Translates to: PAVAWSWVSKESGFLGLIGVLVV*VSAGRG
Trigger: CCCGCGCCCAGCAGAGACCCACACTACCAGGACCCC...TATGAGCCCTAAAAATCCAGACTCTTTCGATACCCAGGACCAAGCCACAGCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp TTGGGCAGCTCCTCTCCTGACCTGCCCATCACAGTCGCCAGATCCGTGAAGAGGGCTGTGGCTTGGTCCTaGGTATCGAAAGAGTCTGGA +
Preference number: 4 (lower is better)
Translates to: LGSSSPDLPITVARSVKRAVAWS*VSKESG
Trigger: TCCAGACTCTTTCGATACCCAGGACCAAGCCACAGC...CCTCTTCACGGATCTGGCGACTGTGATGGGCAGGTCAGGAGAGGAGCTGCCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR TCA 90 bp AGTCTAAGGAAGAATTCCATCCCCTCCGTTTCTTCTTTGCCCAGGAAGGGACAGTGTGGCGCCTTCGCATaGAGAGGCCGATCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: SLRKNSIPSVSSLPRKGQCGAFA*RGRSPG
Trigger: CCCTGGGGATCGGCCTCTTCATGCGAAGGCGCCACA...CTGTCCCTTCCTGGGCAAAGAAGAAACGGAGGGGATGGAATTCTTCCTTAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR TCA 90 bp AGGGCTTTGCGGCTTCTACCAGACAGAACTGTGCCTCCCTGGACAGATGAAGTGGGGTTTGGGGGCAGCTaGCCTGGAGGGAACATATAC +
Preference number: 4 (lower is better)
Translates to: RALRLLPDRTVPPWTDEVGFGGS*PGGNIY
Trigger: GTATATGTTCCCTCCAGGTCAGCTGCCCCCAAACCC...CACTTCATCTGTCCAGGGAGGCACAGTTCTGTCTGGTAGAAGCCGCAAAGCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR GCA 90 bp AACCAGACACAACAAAGAGCTTGTGCAGGCTCGGTCATGTGTTTATCTGCTCCTAGTCACTGGGGGACTTaGCACGGCAGCGCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: NQTQQRACAGSVMCLSAPSHWGT*HGSARS
Trigger: GCTCCGGGCGCTGCCGTGGCAAGTCCCCCAGTGACT...AGGAGCAGATAAACACATGACCGAGCCTGCACAAGCTCTTTGTTGTGTCTGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR GCA 90 bp AGGGCTTTGCGGCTTCTACCAGACAGAACTGTGCCTCCCTGGACAGATGAAGTGCTTCGTCTCGGAATTTaGGGCAGACCAGGCAGTCGC +
Preference number: 4 (lower is better)
Translates to: RALRLLPDRTVPPWTDEVLRLGI*GRPGSR
Trigger: GCGACTGCCTGGTCTGCCGCAAATTCCGAGACGAAG...CACTTCATCTGTCCAGGGAGGCACAGTTCTGTCTGGTAGAAGCCGCAAAGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR GCA 90 bp CACAACAAAGAGCTTGTGCAGGCTCGGTCATGTGTTTATCTGCTCCTTACGCCCGGGGGCAGGTGTCCTTaGACGTGGCTTCGTCTCGGA +
Preference number: 4 (lower is better)
Translates to: HNKELVQARSCVYLLLTPGGRCP*TWLRLG
Trigger: TCCGAGACGAAGCCACGTGCAAGGACACCTGCCCCC...GGGCGTAAGGAGCAGATAAACACATGACCGAGCCTGCACAAGCTCTTTGTTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR GCA 90 bp TTGGGCAGCTCCTCTCCTGACCTGCCCATCACAGTCGCCAGATCCGTGAAGAGGCACCAAAGCTGTATTTaGCCTCGGGGTTCACATCCA +
Preference number: 4 (lower is better)
Translates to: LGSSSPDLPITVARSVKRHQSCI*PRGSHP
Trigger: TGGATGTGAACCCCGAGGGCAAATACAGCTTTGGTG...CCTCTTCACGGATCTGGCGACTGTGATGGGCAGGTCAGGAGAGGAGCTGCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR GCA 90 bp CCTGCTGTGGCTTGGTCCTGGGTATCGAAAGAGTCTGGATTTTTAGGGCTCATAGCAGCCTCCGCAGCGTaGGCTTCCGAACGATGTGGC +
Preference number: 4 (lower is better)
Translates to: PAVAWSWVSKESGFLGLIAASAA*ASERCG
Trigger: GCCACATCGTTCGGAAGCGCACGCTGCGGAGGCTGC...TATGAGCCCTAAAAATCCAGACTCTTTCGATACCCAGGACCAAGCCACAGCAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp AGTCTAAGGAAGAATTCCATCCCCTCCGTTTCTTCTTTGCCCAGGAAGGGACAGGCAGCCTCCGCAGCGTaGGCTTCCGAACGATGTGGC +
Preference number: 4 (lower is better)
Translates to: SLRKNSIPSVSSLPRKGQAASAA*ASERCG
Trigger: GCCACATCGTTCGGAAGCGCACGCTGCGGAGGCTGC...CTGTCCCTTCCTGGGCAAAGAAGAAACGGAGGGGATGGAATTCTTCCTTAGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp CCAAAATGTGCCCGAGGTGGAAGTACTTCCTGGCTAGTCGGTGTAAACGTTGCAACAAGCTCCCTCTCCTaGAGCAGCCTCCGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: PKCARGGSTSWLVGVNVATSSLS*SSLRSV
Trigger: CACGCTGCGGAGGCTGCTGCAGGAGAGGGAGCTTGT...TGCAACGTTTACACCGACTAGCCAGGAAGTACTTCCACCTCGGGCACATTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp GTGAAGAGGCTAAGGGCTTTGCGGCTTCTACCAGACAGAACTGTGCCTCCCTGGGCAATAACCAGGGGGTaGTCTGAAAAGGCCCTACGG +
Preference number: 4 (lower is better)
Translates to: VKRLRALRLLPDRTVPPWAITRG*SEKALR
Trigger: CCGTAGGGCCTTTTCAGAGCACCCCCTGGTTATTGC...CCAGGGAGGCACAGTTCTGTCTGGTAGAAGCCGCAAAGCCCTTAGCCTCTTCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CCA 90 bp TTTGATGTGTCATCCTCTCTTGCTGATTTCATGACAGCAAGACAGGGGCAGCATCGGTGGTTGTGGCGTTaGCGGCGAGGCGGGGACTCG +
Preference number: 4 (lower is better)
Translates to: FDVSSSLADFMTARQGQHRWLWR*RRGGDS
Trigger: CGAGTCCCCGCCTCGCCGCCAACGCCACAACCACCG...ATGCTGCCCCTGTCTTGCTGTCATGAAATCAGCAAGAGAGGATGACACATCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp GTGAAGAGGCTAAGGGCTTTGCGGCTTCTACCAGACAGAACTGTGCCTCCCTGGACAGCCTTCAAGACCTaGCCCAGTGCATCCGTAGGT +
Preference number: 4 (lower is better)
Translates to: VKRLRALRLLPDRTVPPWTAFKT*PSASVG
Trigger: ACCTACGGATGCACTGGGCCAGGTCTTGAAGGCTGT...CCAGGGAGGCACAGTTCTGTCTGGTAGAAGCCGCAAAGCCCTTAGCCTCTTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CCA 90 bp TGCAACTTCCCAAAATGTGCCCGAGGTGGAAGTACTTCCTGGCTAGTCGGTGTACGTAAGGAGGGGGTTTaGGGGCAGCTGACCTGGAGG +
Preference number: 4 (lower is better)
Translates to: CNFPKCARGGSTSWLVGVRKEGV*GQLTWR
Trigger: CCTCCAGGTCAGCTGCCCCCAAACCCCCTCCTTACG...TACACCGACTAGCCAGGAAGTACTTCCACCTCGGGCACATTTTGGGAAGTTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
3UTR CAA 72 bp ATCACAGTCGCCAGATCCGTGAAGAGGCTAAGGGCTTaGCGGCTTCTACCAGACAGAACTGTGCCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: ITVARSVKRLRA*RLLPDRTVPPW
Trigger: CCAGGGAGGCACAGTTCTGTCTGGTAGAAGCCGCAAAGCCCTTAGCCTCTTCACGGATCTGGCGACTGTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR TCA 90 bp GCAAACAACCAGACACAACAAAGAGCTTGTGCAGGCTCGGTCATGTGTTTATCTCTGCCGGGCAGGTCTTaGCGCAGTGGGGGCCGTCAA +
Preference number: 4 (lower is better)
Translates to: ANNQTQQRACAGSVMCLSLPGRS*RSGGRQ
Trigger: TTGACGGCCCCCACTGCGTCAAGACCTGCCCGGCAG...AGATAAACACATGACCGAGCCTGCACAAGCTCTTTGTTGTGTCTGGTTGTTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR TCA 90 bp AGGGCTTTGCGGCTTCTACCAGACAGAACTGTGCCTCCCTGGACAGATGAAGTGTGTCGAATGTGCTGTTaGCACAGGTGGGCTGGACAG +
Preference number: 4 (lower is better)
Translates to: RALRLLPDRTVPPWTDEVCRMCC*HRWAGQ
Trigger: CTGTCCAGCCCACCTGTGTCAACAGCACATTCGACA...CACTTCATCTGTCCAGGGAGGCACAGTTCTGTCTGGTAGAAGCCGCAAAGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR TCA 90 bp AGGGCTTTGCGGCTTCTACCAGACAGAACTGTGCCTCCCTGGACAGATGAAGTGACAGTTGGGCCTGGATaGACTCAGGGTAGCAAGTGC +
Preference number: 4 (lower is better)
Translates to: RALRLLPDRTVPPWTDEVTVGPG*TQGSKC
Trigger: GCACTTGCTACCCTGAGTTCATCCAGGCCCAACTGT...CACTTCATCTGTCCAGGGAGGCACAGTTCTGTCTGGTAGAAGCCGCAAAGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR GCA 90 bp CCCTTTCCATTAACACTGCCCCAACAGAACCTGCCTCAGACCAAGCTAAATGTGGGGGGCAGGTGTCCTTaGACGTGGCTTCGTCTCGGA +
Preference number: 4 (lower is better)
Translates to: PFPLTLPQQNLPQTKLNVGGRCP*TWLRLG
Trigger: TCCGAGACGAAGCCACGTGCAAGGACACCTGCCCCC...CACATTTAGCTTGGTCTGAGGCAGGTTCTGTTGGGGCAGTGTTAATGGAAAGGG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR GCA 90 bp CCTGCTGTGGCTTGGTCCTGGGTATCGAAAGAGTCTGGATTTTTAGGGCTCATAGGGGGCAGGTGTCCTTaGACGTGGCTTCGTCTCGGA +
Preference number: 4 (lower is better)
Translates to: PAVAWSWVSKESGFLGLIGGRCP*TWLRLG
Trigger: TCCGAGACGAAGCCACGTGCAAGGACACCTGCCCCC...TATGAGCCCTAAAAATCCAGACTCTTTCGATACCCAGGACCAAGCCACAGCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp AGGGCTTTGCGGCTTCTACCAGACAGAACTGTGCCTCCCTGGACAGATGAAGTGCGCACTTCTTACACTTaGGGACGCCGTCTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: RALRLLPDRTVPPWTDEVRTSYT*GRRLPP
Trigger: TGGAGGAAGACGGCGTCCGCAAGTGTAAGAAGTGCG...CACTTCATCTGTCCAGGGAGGCACAGTTCTGTCTGGTAGAAGCCGCAAAGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR GCA 90 bp AACCAGACACAACAAAGAGCTTGTGCAGGCTCGGTCATGTGTTTATCTGCTCCTGCAGCCTCCGCAGCGTaGGCTTCCGAACGATGTGGC +
Preference number: 4 (lower is better)
Translates to: NQTQQRACAGSVMCLSAPAASAA*ASERCG
Trigger: GCCACATCGTTCGGAAGCGCACGCTGCGGAGGCTGC...AGGAGCAGATAAACACATGACCGAGCCTGCACAAGCTCTTTGTTGTGTCTGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR GCA 90 bp TGCAACTTCCCAAAATGTGCCCGAGGTGGAAGTACTTCCTGGCTAGTCGGTGTACCGAAGGGCATGAGCTaGGTGATGAGCTGCACGGTG +
Preference number: 4 (lower is better)
Translates to: CNFPKCARGGSTSWLVGVPKGMS*VMSCTV
Trigger: CACCGTGCAGCTCATCACGCAGCTCATGCCCTTCGG...TACACCGACTAGCCAGGAAGTACTTCCACCTCGGGCACATTTTGGGAAGTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp AGTCTAAGGAAGAATTCCATCCCCTCCGTTTCTTCTTTGCCCAGGAAGGGACAGGGTAGTGTGGGTCTCTaGTGGGCGCGGGGTTCAGAG +
Preference number: 4 (lower is better)
Translates to: SLRKNSIPSVSSLPRKGQGSVGL*WARGSE
Trigger: CTCTGAACCCCGCGCCCAGCAGAGACCCACACTACC...CTGTCCCTTCCTGGGCAAAGAAGAAACGGAGGGGATGGAATTCTTCCTTAGACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp CCTGCTGTGGCTTGGTCCTGGGTATCGAAAGAGTCTGGATTTTTAGGGCTCATAGGTAGTGTGGGTCTCTaGTGGGCGCGGGGTTCAGAG +
Preference number: 4 (lower is better)
Translates to: PAVAWSWVSKESGFLGLIGSVGL*WARGSE
Trigger: CTCTGAACCCCGCGCCCAGCAGAGACCCACACTACC...TATGAGCCCTAAAAATCCAGACTCTTTCGATACCCAGGACCAAGCCACAGCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp AGGGCTTTGCGGCTTCTACCAGACAGAACTGTGCCTCCCTGGACAGATGAAGTGAGGGAACTTGTGGGATaGTCCAAGCTCATCCCCTGG +
Preference number: 4 (lower is better)
Translates to: RALRLLPDRTVPPWTDEVRELVG*SKLIPW
Trigger: CCAGGGGATGAGCTTGGAGCATCCCACAAGTTCCCT...CACTTCATCTGTCCAGGGAGGCACAGTTCTGTCTGGTAGAAGCCGCAAAGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CCA 90 bp ACACAGATGTACACACATCATGAACACTCACACACACAGATGTGTATGTCCGTGCGGACGCCGACGAGGTaGCCTGTCGTCCGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: TQMYTHHEHSHTQMCMSVRTPTR*PVVRSG
Trigger: CCCAGACCGGACGACAGGCCACCTCGTCGGCGTCCG...CACGGACATACACATCTGTGTGTGTGAGTGTTCATGATGTGTGTACATCTGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CCA 90 bp AAGATAGAGCCAGCAGAGAGAACAGGGATCAAATCTGTCACAAACACACACATACGTGCGCGGTGGTTGTaGCGTTGGCGGCGAGGCGGG +
Preference number: 4 (lower is better)
Translates to: KIEPAERTGIKSVTNTHIRARWL*RWRRGG
Trigger: CCCGCCTCGCCGCCAACGCCACAACCACCGCGCACG...TATGTGTGTGTTTGTGACAGATTTGATCCCTGTTCTCTCTGCTGGCTCTATCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CCA 90 bp AAGATAGAGCCAGCAGAGAGAACAGGGATCAAATCTGTCACAAACACACACATAGGGGGCCGTGCGCGGTaGTTGTGGCGTTGGCGGCGA +
Preference number: 4 (lower is better)
Translates to: KIEPAERTGIKSVTNTHIGGRAR*LWRWRR
Trigger: TCGCCGCCAACGCCACAACCACCGCGCACGGCCCCC...TATGTGTGTGTTTGTGACAGATTTGATCCCTGTTCTCTCTGCTGGCTCTATCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CCA 90 bp AGGGCTTTGCGGCTTCTACCAGACAGAACTGTGCCTCCCTGGACAGATGAAGTGACTATGTCCCGCCACTaGATGCTCTCCACGTTGCAC +
Preference number: 4 (lower is better)
Translates to: RALRLLPDRTVPPWTDEVTMSRH*MLSTLH
Trigger: GTGCAACGTGGAGAGCATCCAGTGGCGGGACATAGT...CACTTCATCTGTCCAGGGAGGCACAGTTCTGTCTGGTAGAAGCCGCAAAGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CCA 90 bp CCCTTTCCATTAACACTGCCCCAACAGAACCTGCCTCAGACCAAGCTAAATGTGTGTGGCAGCAGTCACTaGGGGACTTGCCACGGCAGC +
Preference number: 4 (lower is better)
Translates to: PFPLTLPQQNLPQTKLNVCGSSH*GTCHGS
Trigger: GCTGCCGTGGCAAGTCCCCCAGTGACTGCTGCCACA...CACATTTAGCTTGGTCTGAGGCAGGTTCTGTTGGGGCAGTGTTAATGGAAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CCA 90 bp CCAAAATGTGCCCGAGGTGGAAGTACTTCCTGGCTAGTCGGTGTAAACGTTGCAGCCACCGGCAGGATGTaGAGATCGCCACTGATGGAG +
Preference number: 4 (lower is better)
Translates to: PKCARGGSTSWLVGVNVAATGRM*RSPLME
Trigger: CTCCATCAGTGGCGATCTCCACATCCTGCCGGTGGC...TGCAACGTTTACACCGACTAGCCAGGAAGTACTTCCACCTCGGGCACATTTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp TTTGATGTGTCATCCTCTCTTGCTGATTTCATGACAGCAAGACAGGGGCAGCATGGGGTCCTGGTAGTGTaGGTCTCTGCTGGGCGCGGG +
Preference number: 4 (lower is better)
Translates to: FDVSSSLADFMTARQGQHGVLVV*VSAGRG
Trigger: CCCGCGCCCAGCAGAGACCCACACTACCAGGACCCC...ATGCTGCCCCTGTCTTGCTGTCATGAAATCAGCAAGAGAGGATGACACATCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp TGGAGGACCTGCTGTGGCTTGGTCCTGGGTATCGAAAGAGTCTGGATTTTTAGGTGCGGGCATGGCTGTTaGGATGGAGGACCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: WRTCCGLVLGIERVWIFRCGHGC*DGGPAV
Trigger: CACAGCAGGTCCTCCATCCCAACAGCCATGCCCGCA...CCTAAAAATCCAGACTCTTTCGATACCCAGGACCAAGCCACAGCAGGTCCTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp TGGAGGACCTGCTGTGGCTTGGTCCTGGGTATCGAAAGAGTCTGGATTTTTAGGACCGATCCGGCCTGCTaGGGCCATGAAGGCCTTCTT +
Preference number: 4 (lower is better)
Translates to: WRTCCGLVLGIERVWIFRTDPAC*GHEGLL
Trigger: AAGAAGGCCTTCATGGCCCCAGCAGGCCGGATCGGT...CCTAAAAATCCAGACTCTTTCGATACCCAGGACCAAGCCACAGCAGGTCCTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp CACAACAAAGAGCTTGTGCAGGCTCGGTCATGTGTTTATCTGCTCCTTACGCCCCTGGCTGCTGCTGAGTaGGTCGAGGAGGTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: HNKELVQARSCVYLLLTPLAAAE*VEEVEE
Trigger: CTCCTCAACCTCCTCGACCCACTCAGCAGCAGCCAG...GGGCGTAAGGAGCAGATAAACACATGACCGAGCCTGCACAAGCTCTTTGTTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR TCA 90 bp CAAACAAGTCAGTCTAACGCTCATGACTGGAAACCACTGGTCCATCAGTGGGGAATTCCCTGCCTCGGCTaGCATTCCGGCAAGAGACGC +
Preference number: 4 (lower is better)
Translates to: QTSQSNAHDWKPLVHQWGIPCLG*HSGKRR
Trigger: GCGTCTCTTGCCGGAATGTCAGCCGAGGCAGGGAAT...TCCCCACTGATGGACCAGTGGTTTCCAGTCATGAGCGTTAGACTGACTTGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR TCA 90 bp GTCAAGATAGAGCCAGCAGAGAGAACAGGGATCAAATCTGTCACAAACACACACTGTGGCGCCTTCGCATaGAGAGGCCGATCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: VKIEPAERTGIKSVTNTHCGAFA*RGRSPG
Trigger: CCCTGGGGATCGGCCTCTTCATGCGAAGGCGCCACA...GTGTGTGTTTGTGACAGATTTGATCCCTGTTCTCTCTGCTGGCTCTATCTTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR TCA 90 bp TGCAGTGGAAGCCTTGAAGCAGAACCACTGGAATCAAGCATCCTCTGGAAGACTAGCCCTGCTGTGGGATaGGGTACTCGTCGGCATCCA +
Preference number: 4 (lower is better)
Translates to: CSGSLEAEPLESSILWKTSPAVG*GTRRHP
Trigger: TGGATGCCGACGAGTACCTCATCCCACAGCAGGGCT...AGTCTTCCAGAGGATGCTTGATTCCAGTGGTTCTGCTTCAAGGCTTCCACTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR TCA 90 bp AACCAGACACAACAAAGAGCTTGTGCAGGCTCGGTCATGTGTTTATCTGCTCCTACGTGGAGGGGCTGCTaGAGAAGCCCTGCTGTGGGA +
Preference number: 4 (lower is better)
Translates to: NQTQQRACAGSVMCLSAPTWRGC*RSPAVG
Trigger: TCCCACAGCAGGGCTTCTTCAGCAGCCCCTCCACGT...AGGAGCAGATAAACACATGACCGAGCCTGCACAAGCTCTTTGTTGTGTCTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR TCA 90 bp CCCTTTCCATTAACACTGCCCCAACAGAACCTGCCTCAGACCAAGCTAAATGTGGGCGCCTGTGGGGTCTaGGCTGTATCGCTGCAAGAA +
Preference number: 4 (lower is better)
Translates to: PFPLTLPQQNLPQTKLNVGACGV*AVSLQE
Trigger: TTCTTGCAGCGATACAGCTCAGACCCCACAGGCGCC...CACATTTAGCTTGGTCTGAGGCAGGTTCTGTTGGGGCAGTGTTAATGGAAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR TCA 90 bp CAGCTGTGGGCTATTGGTCCAAATGCTGATGAATCCAATGTGGGCTGGAATCCGTGGGCTGGACAGTGTTaGGATACTCGGGGTTGCCCA +
Preference number: 4 (lower is better)
Translates to: QLWAIGPNADESNVGWNPWAGQC*DTRGCP
Trigger: TGGGCAACCCCGAGTATCTCAACACTGTCCAGCCCA...CGGATTCCAGCCCACATTGGATTCATCAGCATTTGGACCAATAGCCCACAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR TCA 90 bp CAGCTGTGGGCTATTGGTCCAAATGCTGATGAATCCAATGTGGGCTGGAATCCGGGCCTGCTGGGGCCATaGAGGCCTTCTTGGATCTTT +
Preference number: 4 (lower is better)
Translates to: QLWAIGPNADESNVGWNPGLLGP*RPSWIF
Trigger: AAAGATCCAAGAAGGCCTTCATGGCCCCAGCAGGCC...CGGATTCCAGCCCACATTGGATTCATCAGCATTTGGACCAATAGCCCACAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp CACAACAAAGAGCTTGTGCAGGCTCGGTCATGTGTTTATCTGCTCCTTACGCCCCAGCGCCCGGAGCACTaGTGGGCACAGATGATTTTG +
Preference number: 4 (lower is better)
Translates to: HNKELVQARSCVYLLLTPQRPEH*WAQMIL
Trigger: CAAAATCATCTGTGCCCAGCAGTGCTCCGGGCGCTG...GGGCGTAAGGAGCAGATAAACACATGACCGAGCCTGCACAAGCTCTTTGTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR GCA 90 bp TGGAGGACCTGCTGTGGCTTGGTCCTGGGTATCGAAAGAGTCTGGATTTTTAGGCTTCGTCTCGGAATTTaGGGCAGACCAGGCAGTCGC +
Preference number: 4 (lower is better)
Translates to: WRTCCGLVLGIERVWIFRLRLGI*GRPGSR
Trigger: GCGACTGCCTGGTCTGCCGCAAATTCCGAGACGAAG...CCTAAAAATCCAGACTCTTTCGATACCCAGGACCAAGCCACAGCAGGTCCTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp CCGCCCTTGAGAACCAGTGCCTTTCCTGCTAAGCAATCCATAGTCCCCTTATGTTTCTCCCATGACTCCTaGCGGGCAGGTCTTGACGCA +
Preference number: 4 (lower is better)
Translates to: PPLRTSAFPAKQSIVPLCFSHDS*RAGLDA
Trigger: TGCGTCAAGACCTGCCCGGCAGGAGTCATGGGAGAA...ACATAAGGGGACTATGGATTGCTTAGCAGGAAAGGCACTGGTTCTCAAGGGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR GCA 90 bp CCTGCTGTGGCTTGGTCCTGGGTATCGAAAGAGTCTGGATTTTTAGGGCTCATACACATGGCCGGCGTCTaGGTACTTCCAGACCAGGGT +
Preference number: 4 (lower is better)
Translates to: PAVAWSWVSKESGFLGLIHMAGV*VLPDQG
Trigger: ACCCTGGTCTGGAAGTACGCAGACGCCGGCCATGTG...TATGAGCCCTAAAAATCCAGACTCTTTCGATACCCAGGACCAAGCCACAGCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp CCTGCTGTGGCTTGGTCCTGGGTATCGAAAGAGTCTGGATTTTTAGGGCTCATAGTCCCTTATACACCGTaGCGAACGCACCGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: PAVAWSWVSKESGFLGLIVPYTP*RTHRSP
Trigger: TGGGCTCCGGTGCGTTCGGCACGGTGTATAAGGGAC...TATGAGCCCTAAAAATCCAGACTCTTTCGATACCCAGGACCAAGCCACAGCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp TGCAGTGGAAGCCTTGAAGCAGAACCACTGGAATCAAGCATCCTCTGGAAGACTAGCTGCGTGATGAGCTaGACGGTGGAGGTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: CSGSLEAEPLESSILWKTSCVMS*TVEVRQ
Trigger: CTGCCTCACCTCCACCGTGCAGCTCATCACGCAGCT...AGTCTTCCAGAGGATGCTTGATTCCAGTGGTTCTGCTTCAAGGCTTCCACTGCA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp CCCTTTCCATTAACACTGCCCCAACAGAACCTGCCTCAGACCAAGCTAAATGTGCAGTACGTTCCTGGCTaGCAGGTCGCGGTGCACCAA +
Preference number: 4 (lower is better)
Translates to: PFPLTLPQQNLPQTKLNVQYVPG*QVAVHQ
Trigger: TTGGTGCACCGCGACCTGGCAGCCAGGAACGTACTG...CACATTTAGCTTGGTCTGAGGCAGGTTCTGTTGGGGCAGTGTTAATGGAAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR GCA 90 bp CAAACAAGTCAGTCTAACGCTCATGACTGGAAACCACTGGTCCATCAGTGGGGAGGTTGCCCACTGCAGTaGTGTGGGGGTCCTGGTAGT +
Preference number: 4 (lower is better)
Translates to: QTSQSNAHDWKPLVHQWGGCPLQ*CGGPGS
Trigger: ACTACCAGGACCCCCACAGCACTGCAGTGGGCAACC...TCCCCACTGATGGACCAGTGGTTTCCAGTCATGAGCGTTAGACTGACTTGTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp TGGAGGACCTGCTGTGGCTTGGTCCTGGGTATCGAAAGAGTCTGGATTTTTAGGTTGGGATGGAGGACCTaGTGTGGCTTGGTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: WRTCCGLVLGIERVWIFRLGWRT*CGLVLG
Trigger: ACCCAGGACCAAGCCACAGCAGGTCCTCCATCCCAA...CCTAAAAATCCAGACTCTTTCGATACCCAGGACCAAGCCACAGCAGGTCCTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp TGCAGTGGAAGCCTTGAAGCAGAACCACTGGAATCAAGCATCCTCTGGAAGACTAGTACCGATCCGGCCTaGTGGGGCCATGAAGGCCTT +
Preference number: 4 (lower is better)
Translates to: CSGSLEAEPLESSILWKTSTDPA*WGHEGL
Trigger: AAGGCCTTCATGGCCCCAGCAGGCCGGATCGGTACT...AGTCTTCCAGAGGATGCTTGATTCCAGTGGTTCTGCTTCAAGGCTTCCACTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp TTCTGCTCAAAGGGACAATATTCTTGCTGGATGCGTTTCTGTAAATGCTTCACAGGGGGCCGTGCGCGGTaGTTGTGGCGTTGGCGGCGA +
Preference number: 4 (lower is better)
Translates to: FCSKGQYSCWMRFCKCFTGGRAR*LWRWRR
Trigger: TCGCCGCCAACGCCACAACCACCGCGCACGGCCCCC...TGTGAAGCATTTACAGAAACGCATCCAGCAAGAATATTGTCCCTTTGAGCAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp CCAAAATGTGCCCGAGGTGGAAGTACTTCCTGGCTAGTCGGTGTAAACGTTGCATCTCCCGATCAATACTaGACGGAGTCAGGGGGCCGT +
Preference number: 4 (lower is better)
Translates to: PKCARGGSTSWLVGVNVASPDQY*TESGGR
Trigger: ACGGCCCCCTGACTCCGTCCAGTATTGATCGGGAGA...TGCAACGTTTACACCGACTAGCCAGGAAGTACTTCCACCTCGGGCACATTTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp CAGCTGTGGGCTATTGGTCCAAATGCTGATGAATCCAATGTGGGCTGGAATCCGTGGCAGCTGCCCAGGTaGTTCTGGAAGTCCATCGAC +
Preference number: 4 (lower is better)
Translates to: QLWAIGPNADESNVGWNPWQLPR*FWKSID
Trigger: GTCGATGGACTTCCAGAACCACCTGGGCAGCTGCCA...CGGATTCCAGCCCACATTGGATTCATCAGCATTTGGACCAATAGCCCACAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CCA 90 bp AGGGCTTTGCGGCTTCTACCAGACAGAACTGTGCCTCCCTGGACAGATGAAGTGCTCCACAAACTCCCTTaGCTCACCCTCCAGAAGGTT +
Preference number: 4 (lower is better)
Translates to: RALRLLPDRTVPPWTDEVLHKLP*LTLQKV
Trigger: AACCTTCTGGAGGGTGAGCCAAGGGAGTTTGTGGAG...CACTTCATCTGTCCAGGGAGGCACAGTTCTGTCTGGTAGAAGCCGCAAAGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CCA 90 bp CCGCCCTTGAGAACCAGTGCCTTTCCTGCTAAGCAATCCATAGTCCCCTTATGTCTGAGGCAGGCACTCTaGGTGGCACTGTATGCACTC +
Preference number: 4 (lower is better)
Translates to: PPLRTSAFPAKQSIVPLCLRQAL*VALYAL
Trigger: GAGTGCATACAGTGCCACCCAGAGTGCCTGCCTCAG...ACATAAGGGGACTATGGATTGCTTAGCAGGAAAGGCACTGGTTCTCAAGGGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CCA 90 bp CCCTTTCCATTAACACTGCCCCAACAGAACCTGCCTCAGACCAAGCTAAATGTGCACAGGTGGCACACATaGCCGGCGTCTGCGTACTTC +
Preference number: 4 (lower is better)
Translates to: PFPLTLPQQNLPQTKLNVHRWHT*PASAYF
Trigger: GAAGTACGCAGACGCCGGCCATGTGTGCCACCTGTG...CACATTTAGCTTGGTCTGAGGCAGGTTCTGTTGGGGCAGTGTTAATGGAAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CCA 90 bp CAGCTGTGGGCTATTGGTCCAAATGCTGATGAATCCAATGTGGGCTGGAATCCGGAAGAAGCCCTGCTGTaGGATGAGGTACTCGTCGGC +
Preference number: 4 (lower is better)
Translates to: QLWAIGPNADESNVGWNPEEALL*DEVLVG
Trigger: GCCGACGAGTACCTCATCCCACAGCAGGGCTTCTTC...CGGATTCCAGCCCACATTGGATTCATCAGCATTTGGACCAATAGCCCACAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp CAGCTGTGGGCTATTGGTCCAAATGCTGATGAATCCAATGTGGGCTGGAATCCGCAGTCAAGGCGCCTGTaGGGTCTGAGCTGTATCGCT +
Preference number: 4 (lower is better)
Translates to: QLWAIGPNADESNVGWNPQSRRL*GLSCIA
Trigger: AGCGATACAGCTCAGACCCCACAGGCGCCTTGACTG...CGGATTCCAGCCCACATTGGATTCATCAGCATTTGGACCAATAGCCCACAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp TGCAGTGGAAGCCTTGAAGCAGAACCACTGGAATCAAGCATCCTCTGGAAGACTACCGATCCGGCCTGCTaGGGCCATGAAGGCCTTCTT +
Preference number: 4 (lower is better)
Translates to: CSGSLEAEPLESSILWKTTDPAC*GHEGLL
Trigger: AAGAAGGCCTTCATGGCCCCAGCAGGCCGGATCGGT...AGTCTTCCAGAGGATGCTTGATTCCAGTGGTTCTGCTTCAAGGCTTCCACTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp TGGAGGACCTGCTGTGGCTTGGTCCTGGGTATCGAAAGAGTCTGGATTTTTAGGCCACTGGTCCATCAGTaGGGAGTAAGTACCGTGGGG +
Preference number: 4 (lower is better)
Translates to: WRTCCGLVLGIERVWIFRPLVHQ*GVSTVG
Trigger: CCCCACGGTACTTACTCCCCACTGATGGACCAGTGG...CCTAAAAATCCAGACTCTTTCGATACCCAGGACCAAGCCACAGCAGGTCCTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp CAGCTGTGGGCTATTGGTCCAAATGCTGATGAATCCAATGTGGGCTGGAATCCGAGCAGTGGAGGCCTCTaGCAGCTGTTTCCTCGGTCA +
Preference number: 4 (lower is better)
Translates to: QLWAIGPNADESNVGWNPSSGGL*QLFPRS
Trigger: TGACCGAGGAAACAGCTGCCAGAGGCCTCCACTGCT...CGGATTCCAGCCCACATTGGATTCATCAGCATTTGGACCAATAGCCCACAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CCA 90 bp AGGGCTTTGCGGCTTCTACCAGACAGAACTGTGCCTCCCTGGACAGATGAAGTGCTGAAGCTGGGGTCATaGGGTAAGGTCTTCCAGGAA +
Preference number: 4 (lower is better)
Translates to: RALRLLPDRTVPPWTDEVLKLGS*GKVFQE
Trigger: TTCCTGGAAGACCTTACCCCATGACCCCAGCTTCAG...CACTTCATCTGTCCAGGGAGGCACAGTTCTGTCTGGTAGAAGCCGCAAAGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CCA 90 bp AGGGCTTTGCGGCTTCTACCAGACAGAACTGTGCCTCCCTGGACAGATGAAGTGAAAAGGCCCTACGGCTaGGCTGCACCTGAGAAAATC +
Preference number: 4 (lower is better)
Translates to: RALRLLPDRTVPPWTDEVKRPYG*AAPEKI
Trigger: GATTTTCTCAGGTGCAGCCCAGCCGTAGGGCCTTTT...CACTTCATCTGTCCAGGGAGGCACAGTTCTGTCTGGTAGAAGCCGCAAAGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR CAA 72 bp AGCAGAACCACTGGAATCAAGCATCCTCTGGAAGACTaGTGGCTTGTGCTCCTTGCTCACAGTTGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: SRTTGIKHPLED*WLVLLAHSWAW
Trigger: CCAGGCCCAACTGTGAGCAAGGAGCACAAGCCACAAGTCTTCCAGAGGATGCTTGATTCCAGTGGTTCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
3UTR CAA 72 bp TGGTTGGGACCAGAAGATTCCCAAGGGCAGCCGCCCTaGAGAACCAGTGCCTTTCCTGCTAAGCAATCCATA +
Preference number: 4 (lower is better)
Translates to: WLGPEDSQGQPP*RTSAFPAKQSI
Trigger: TATGGATTGCTTAGCAGGAAAGGCACTGGTTCTCAAGGGCGGCTGCCCTTGGGAATCTTCTGGTCCCAACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR TCA 90 bp TTGGGCAGCTCCTCTCCTGACCTGCCCATCACAGTCGCCAGATCCGTGAAGAGGATGTTATGTTCAGGCTaGCGACTGCAAGAGAAAACT +
Preference number: 4 (lower is better)
Translates to: LGSSSPDLPITVARSVKRMLCSG*RLQEKT
Trigger: AGTTTTCTCTTGCAGTCGTCAGCCTGAACATAACAT...CCTCTTCACGGATCTGGCGACTGTGATGGGCAGGTCAGGAGAGGAGCTGCCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR TCA 90 bp AGGGCTTTGCGGCTTCTACCAGACAGAACTGTGCCTCCCTGGACAGATGAAGTGCATCACTTATCTCCTTaGGGGAGCGTAATCCCAAGG +
Preference number: 4 (lower is better)
Translates to: RALRLLPDRTVPPWTDEVHHLSP*GSVIPR
Trigger: CCTTGGGATTACGCTCCCTCAAGGAGATAAGTGATG...CACTTCATCTGTCCAGGGAGGCACAGTTCTGTCTGGTAGAAGCCGCAAAGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR TCA 90 bp AACCAGACACAACAAAGAGCTTGTGCAGGCTCGGTCATGTGTTTATCTGCTCCTCCCGTCCTGTGCAGGTaGTGTTCATGGCCTGAGGCA +
Preference number: 4 (lower is better)
Translates to: NQTQQRACAGSVMCLSAPPVLCR*CSWPEA
Trigger: TGCCTCAGGCCATGAACATCACCTGCACAGGACGGG...AGGAGCAGATAAACACATGACCGAGCCTGCACAAGCTCTTTGTTGTGTCTGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR TCA 90 bp CACAACAAAGAGCTTGTGCAGGCTCGGTCATGTGTTTATCTGCTCCTTACGCCCTCTGCACACACCAGTTaGGCAGGTACTGGGAGCCAA +
Preference number: 4 (lower is better)
Translates to: HNKELVQARSCVYLLLTPSAHTS*AGTGSQ
Trigger: TTGGCTCCCAGTACCTGCTCAACTGGTGTGTGCAGA...GGGCGTAAGGAGCAGATAAACACATGACCGAGCCTGCACAAGCTCTTTGTTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR TCA 90 bp CCGCCCTTGAGAACCAGTGCCTTTCCTGCTAAGCAATCCATAGTCCCCTTATGTTTTCATCCCCCTGAATaGCAAGGTAGCGCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: PPLRTSAFPAKQSIVPLCFHPPE*QGSAGG
Trigger: ACCCCCAGCGCTACCTTGTCATTCAGGGGGATGAAA...ACATAAGGGGACTATGGATTGCTTAGCAGGAAAGGCACTGGTTCTCAAGGGCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR TCA 90 bp TGGAGGACCTGCTGTGGCTTGGTCCTGGGTATCGAAAGAGTCTGGATTTTTAGGTTTCATCCCCCTGAATaGCAAGGTAGCGCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: WRTCCGLVLGIERVWIFRFHPPE*QGSAGG
Trigger: ACCCCCAGCGCTACCTTGTCATTCAGGGGGATGAAA...CCTAAAAATCCAGACTCTTTCGATACCCAGGACCAAGCCACAGCAGGTCCTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR TCA 90 bp TTTGATGTGTCATCCTCTCTTGCTGATTTCATGACAGCAAGACAGGGGCAGCATACGTGGAGGGGCTGCTaGAGAAGCCCTGCTGTGGGA +
Preference number: 4 (lower is better)
Translates to: FDVSSSLADFMTARQGQHTWRGC*RSPAVG
Trigger: TCCCACAGCAGGGCTTCTTCAGCAGCCCCTCCACGT...ATGCTGCCCCTGTCTTGCTGTCATGAAATCAGCAAGAGAGGATGACACATCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR TCA 90 bp CAAACAAGTCAGTCTAACGCTCATGACTGGAAACCACTGGTCCATCAGTGGGGAGGCCTGCTGGGGCCATaGAGGCCTTCTTGGATCTTT +
Preference number: 4 (lower is better)
Translates to: QTSQSNAHDWKPLVHQWGGLLGP*RPSWIF
Trigger: AAAGATCCAAGAAGGCCTTCATGGCCCCAGCAGGCC...TCCCCACTGATGGACCAGTGGTTTCCAGTCATGAGCGTTAGACTGACTTGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR TCA 90 bp TGGAGGACCTGCTGTGGCTTGGTCCTGGGTATCGAAAGAGTCTGGATTTTTAGGGTACCTGCCATGACTTaGTACAGTACCGATCCGGCC +
Preference number: 4 (lower is better)
Translates to: WRTCCGLVLGIERVWIFRVPAMT*YSTDPA
Trigger: GGCCGGATCGGTACTGTATCAAGTCATGGCAGGTAC...CCTAAAAATCCAGACTCTTTCGATACCCAGGACCAAGCCACAGCAGGTCCTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp GTAAATGCTTCACAGTTTGAAGACAAAGGAATGCAACTTCCCAAAATGTGCCCGGGAGTCAGGGGGCCGTaGGCGGTGGTTGTGGCGTTG +
Preference number: 4 (lower is better)
Translates to: VNASQFEDKGMQLPKMCPGVRGP*AVVVAL
Trigger: CAACGCCACAACCACCGCGCACGGCCCCCTGACTCC...CGGGCACATTTTGGGAAGTTGCATTCCTTTGTCTTCAAACTGTGAAGCATTTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp AGTCTAAGGAAGAATTCCATCCCCTCCGTTTCTTCTTTGCCCAGGAAGGGACAGGCAGTTCTCCTCTCCTaGACCCCAGCAGCTCCCATT +
Preference number: 4 (lower is better)
Translates to: SLRKNSIPSVSSLPRKGQAVLLS*TPAAPI
Trigger: AATGGGAGCTGCTGGGGTGCAGGAGAGGAGAACTGC...CTGTCCCTTCCTGGGCAAAGAAGAAACGGAGGGGATGGAATTCTTCCTTAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp AGTCACAACATCAAGAACTTTCAGCAAACACCTAAGCTTTGGTGTCATCAGCTGAGTCACTGGGGGACTTaGCACGGCAGCGCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: SHNIKNFQQTPKLWCHQLSHWGT*HGSARS
Trigger: GCTCCGGGCGCTGCCGTGGCAAGTCCCCCAGTGACT...CAGCTGATGACACCAAAGCTTAGGTGTTTGCTGAAAGTTCTTGATGTTGTGACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR GCA 90 bp TTTGATGTGTCATCCTCTCTTGCTGATTTCATGACAGCAAGACAGGGGCAGCATGGGGCCTGTGCAGCCTaGAGCACACTGGTTGTGGCA +
Preference number: 4 (lower is better)
Translates to: FDVSSSLADFMTARQGQHGACAA*STLVVA
Trigger: TGCCACAACCAGTGTGCTGCAGGCTGCACAGGCCCC...ATGCTGCCCCTGTCTTGCTGTCATGAAATCAGCAAGAGAGGATGACACATCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp TGGAGGACCTGCTGTGGCTTGGTCCTGGGTATCGAAAGAGTCTGGATTTTTAGGCGCACTTCTTACACTTaGGGACGCCGTCTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: WRTCCGLVLGIERVWIFRRTSYT*GRRLPP
Trigger: TGGAGGAAGACGGCGTCCGCAAGTGTAAGAAGTGCG...CCTAAAAATCCAGACTCTTTCGATACCCAGGACCAAGCCACAGCAGGTCCTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp CAAACAAGTCAGTCTAACGCTCATGACTGGAAACCACTGGTCCATCAGTGGGGAGGAGTCACCCCTAAATaGCACCGGCAGGATGTGGAG +
Preference number: 4 (lower is better)
Translates to: QTSQSNAHDWKPLVHQWGGVTPK*HRQDVE
Trigger: CTCCACATCCTGCCGGTGGCATTTAGGGGTGACTCC...TCCCCACTGATGGACCAGTGGTTTCCAGTCATGAGCGTTAGACTGACTTGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp TGCAGTGGAAGCCTTGAAGCAGAACCACTGGAATCAAGCATCCTCTGGAAGACTTTCTCCCATGACTCCTaGCGGGCAGGTCTTGACGCA +
Preference number: 4 (lower is better)
Translates to: CSGSLEAEPLESSILWKTFSHDS*RAGLDA
Trigger: TGCGTCAAGACCTGCCCGGCAGGAGTCATGGGAGAA...AGTCTTCCAGAGGATGCTTGATTCCAGTGGTTCTGCTTCAAGGCTTCCACTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp AACCAGACACAACAAAGAGCTTGTGCAGGCTCGGTCATGTGTTTATCTGCTCCTCACATGGCCGGCGTCTaGGTACTTCCAGACCAGGGT +
Preference number: 4 (lower is better)
Translates to: NQTQQRACAGSVMCLSAPHMAGV*VLPDQG
Trigger: ACCCTGGTCTGGAAGTACGCAGACGCCGGCCATGTG...AGGAGCAGATAAACACATGACCGAGCCTGCACAAGCTCTTTGTTGTGTCTGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR GCA 90 bp TGGAGGACCTGCTGTGGCTTGGTCCTGGGTATCGAAAGAGTCTGGATTTTTAGGCAAGACCTGGCCCAGTaGATCCGTAGGTGCAGTTTG +
Preference number: 4 (lower is better)
Translates to: WRTCCGLVLGIERVWIFRQDLAQ*IRRCSL
Trigger: CAAACTGCACCTACGGATGCACTGGGCCAGGTCTTG...CCTAAAAATCCAGACTCTTTCGATACCCAGGACCAAGCCACAGCAGGTCCTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp GCAAACAACCAGACACAACAAAGAGCTTGTGCAGGCTCGGTCATGTGTTTATCTACAAGCTCCCTCTCCTaGAGCAGCCTCCGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: ANNQTQQRACAGSVMCLSTSSLS*SSLRSV
Trigger: CACGCTGCGGAGGCTGCTGCAGGAGAGGGAGCTTGT...AGATAAACACATGACCGAGCCTGCACAAGCTCTTTGTTGTGTCTGGTTGTTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR GCA 90 bp AACCAGACACAACAAAGAGCTTGTGCAGGCTCGGTCATGTGTTTATCTGCTCCTCAGTACGTTCCTGGCTaGCAGGTCGCGGTGCACCAA +
Preference number: 4 (lower is better)
Translates to: NQTQQRACAGSVMCLSAPQYVPG*QVAVHQ
Trigger: TTGGTGCACCGCGACCTGGCAGCCAGGAACGTACTG...AGGAGCAGATAAACACATGACCGAGCCTGCACAAGCTCTTTGTTGTGTCTGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR GCA 90 bp TGGAGGACCTGCTGTGGCTTGGTCCTGGGTATCGAAAGAGTCTGGATTTTTAGGCTGCTGAAGAAGCCCTaGTGTGGGATGAGGTACTCG +
Preference number: 4 (lower is better)
Translates to: WRTCCGLVLGIERVWIFRLLKKP*CGMRYS
Trigger: CGAGTACCTCATCCCACAGCAGGGCTTCTTCAGCAG...CCTAAAAATCCAGACTCTTTCGATACCCAGGACCAAGCCACAGCAGGTCCTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp CCTGCTGTGGCTTGGTCCTGGGTATCGAAAGAGTCTGGATTTTTAGGGCTCATATTGGGATGGAGGACCTaGTGTGGCTTGGTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: PAVAWSWVSKESGFLGLILGWRT*CGLVLG
Trigger: ACCCAGGACCAAGCCACAGCAGGTCCTCCATCCCAA...TATGAGCCCTAAAAATCCAGACTCTTTCGATACCCAGGACCAAGCCACAGCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp CTTAGAGGGAGCAGGTTGTTTAGGGTGACTGACCTCAGCCTTATGTGGACTTTAAGTACCGATCCGGCCTaGTGGGGCCATGAAGGCCTT +
Preference number: 4 (lower is better)
Translates to: LRGSRLFRVTDLSLMWTLSTDPA*WGHEGL
Trigger: AAGGCCTTCATGGCCCCAGCAGGCCGGATCGGTACT...TAAAGTCCACATAAGGCTGAGGTCAGTCACCCTAAACAACCTGCTCCCTCTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR GCA 90 bp CCTGCTGTGGCTTGGTCCTGGGTATCGAAAGAGTCTGGATTTTTAGGGCTCATAAACCTCCCTGCTCTGTaGTCTCACAGTGCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: PAVAWSWVSKESGFLGLINLPAL*SHSAWL
Trigger: CAGCCAGGCACTGTGAGAGCACAGAGCAGGGAGGTT...TATGAGCCCTAAAAATCCAGACTCTTTCGATACCCAGGACCAAGCCACAGCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR GCA 90 bp GAATTTGCCTCCAAGTCCATGTCCTTGTGGCTAATCCCTAGGCCAGTAGTTCTCAGGACCCAACCTCCCTaGTCTGTGCTCTCACAGTGC +
Preference number: 4 (lower is better)
Translates to: EFASKSMSLWLIPRPVVLRTQPP*SVLSQC
Trigger: GCACTGTGAGAGCACAGAGCAGGGAGGTTGGGTCCT...GAGAACTACTGGCCTAGGGATTAGCCACAAGGACATGGACTTGGAGGCAAATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CCA 90 bp CACAACAAAGAGCTTGTGCAGGCTCGGTCATGTGTTTATCTGCTCCTTACGCCCCCCAGCAGCTCCCATTaGGACAGCTTGGATCACACT +
Preference number: 4 (lower is better)
Translates to: HNKELVQARSCVYLLLTPPSSSH*DSLDHT
Trigger: AGTGTGATCCAAGCTGTCCCAATGGGAGCTGCTGGG...GGGCGTAAGGAGCAGATAAACACATGACCGAGCCTGCACAAGCTCTTTGTTGTG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CCA 90 bp CAAACAAGTCAGTCTAACGCTCATGACTGGAAACCACTGGTCCATCAGTGGGGACGCCCGGAGCACTGCTaGGCACAGATGATTTTGGTC +
Preference number: 4 (lower is better)
Translates to: QTSQSNAHDWKPLVHQWGRPEHC*AQMILV
Trigger: GACCAAAATCATCTGTGCCCAGCAGTGCTCCGGGCG...TCCCCACTGATGGACCAGTGGTTTCCAGTCATGAGCGTTAGACTGACTTGTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp GCAAACAACCAGACACAACAAAGAGCTTGTGCAGGCTCGGTCATGTGTTTATCTTGTGGCAGCAGTCACTaGGGGACTTGCCACGGCAGC +
Preference number: 4 (lower is better)
Translates to: ANNQTQQRACAGSVMCLSCGSSH*GTCHGS
Trigger: GCTGCCGTGGCAAGTCCCCCAGTGACTGCTGCCACA...AGATAAACACATGACCGAGCCTGCACAAGCTCTTTGTTGTGTCTGGTTGTTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CCA 90 bp CAGCTGTGGGCTATTGGTCCAAATGCTGATGAATCCAATGTGGGCTGGAATCCGGTTGTAGAGCATGAGTaGGGGGCAGGTGTCCTTGCA +
Preference number: 4 (lower is better)
Translates to: QLWAIGPNADESNVGWNPVVEHE*GAGVLA
Trigger: TGCAAGGACACCTGCCCCCCACTCATGCTCTACAAC...CGGATTCCAGCCCACATTGGATTCATCAGCATTTGGACCAATAGCCCACAGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp AACCAGACACAACAAAGAGCTTGTGCAGGCTCGGTCATGTGTTTATCTGCTCCTGCCACCGGCAGGATGTaGAGATCGCCACTGATGGAG +
Preference number: 4 (lower is better)
Translates to: NQTQQRACAGSVMCLSAPATGRM*RSPLME
Trigger: CTCCATCAGTGGCGATCTCCACATCCTGCCGGTGGC...AGGAGCAGATAAACACATGACCGAGCCTGCACAAGCTCTTTGTTGTGTCTGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CCA 90 bp ATAACTTACTTAGAGAATGCAGAGGGTCCCAGGGCGTTTTCAAAGCTCAGGTGGAAGGCATGGCAGACCTaGCCTGTGGCCTTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: ITYLENAEGPRAFSKLRWKAWQT*PVALQL
Trigger: CAGCTGCAAGGCCACAGGCCAGGTCTGCCATGCCTT...CCACCTGAGCTTTGAAAACGCCCTGGGACCCTCTGCATTCTCTAAGTAAGTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CCA 90 bp AACCAGACACAACAAAGAGCTTGTGCAGGCTCGGTCATGTGTTTATCTGCTCCTCACAGGTGGCACACATaGCCGGCGTCTGCGTACTTC +
Preference number: 4 (lower is better)
Translates to: NQTQQRACAGSVMCLSAPHRWHT*PASAYF
Trigger: GAAGTACGCAGACGCCGGCCATGTGTGCCACCTGTG...AGGAGCAGATAAACACATGACCGAGCCTGCACAAGCTCTTTGTTGTGTCTGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CCA 90 bp CCTGCTGTGGCTTGGTCCTGGGTATCGAAAGAGTCTGGATTTTTAGGGCTCATATTTGGATGGCACAGGTaGCACACATGGCCGGCGTCT +
Preference number: 4 (lower is better)
Translates to: PAVAWSWVSKESGFLGLIFGWHR*HTWPAS
Trigger: AGACGCCGGCCATGTGTGCCACCTGTGCCATCCAAA...TATGAGCCCTAAAAATCCAGACTCTTTCGATACCCAGGACCAAGCCACAGCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp TGCAACTTCCCAAAATGTGCCCGAGGTGGAAGTACTTCCTGGCTAGTCGGTGTAACAGCCTTCAAGACCTaGCCCAGTGCATCCGTAGGT +
Preference number: 4 (lower is better)
Translates to: CNFPKCARGGSTSWLVGVTAFKT*PSASVG
Trigger: ACCTACGGATGCACTGGGCCAGGTCTTGAAGGCTGT...TACACCGACTAGCCAGGAAGTACTTCCACCTCGGGCACATTTTGGGAAGTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp CCCTTTCCATTAACACTGCCCCAACAGAACCTGCCTCAGACCAAGCTAAATGTGGAAGAAGCCCTGCTGTaGGATGAGGTACTCGTCGGC +
Preference number: 4 (lower is better)
Translates to: PFPLTLPQQNLPQTKLNVEEALL*DEVLVG
Trigger: GCCGACGAGTACCTCATCCCACAGCAGGGCTTCTTC...CACATTTAGCTTGGTCTGAGGCAGGTTCTGTTGGGGCAGTGTTAATGGAAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CCA 90 bp TGGAGGACCTGCTGTGGCTTGGTCCTGGGTATCGAAAGAGTCTGGATTTTTAGGTCCAGGCTAATTTGGTaGCTGCCTTTCTGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: WRTCCGLVLGIERVWIFRSRLIW*LPFWAQ
Trigger: CTGGGCCCAGAAAGGCAGCCACCAAATTAGCCTGGA...CCTAAAAATCCAGACTCTTTCGATACCCAGGACCAAGCCACAGCAGGTCCTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp CCAAAATGTGCCCGAGGTGGAAGTACTTCCTGGCTAGTCGGTGTAAACGTTGCAGGACCTGCTGTGGCTTaGTCCTGGGTATCGAAAGAG +
Preference number: 4 (lower is better)
Translates to: PKCARGGSTSWLVGVNVAGPAVA*SWVSKE
Trigger: CTCTTTCGATACCCAGGACCAAGCCACAGCAGGTCC...TGCAACGTTTACACCGACTAGCCAGGAAGTACTTCCACCTCGGGCACATTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp TGCAGTGGAAGCCTTGAAGCAGAACCACTGGAATCAAGCATCCTCTGGAAGACTGAGCTAATGCGGGCATaGCTGTTGGGATGGAGGACC +
Preference number: 4 (lower is better)
Translates to: CSGSLEAEPLESSILWKTELMRA*LLGWRT
Trigger: GGTCCTCCATCCCAACAGCCATGCCCGCATTAGCTC...AGTCTTCCAGAGGATGCTTGATTCCAGTGGTTCTGCTTCAAGGCTTCCACTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp TGGAGGACCTGCTGTGGCTTGGTCCTGGGTATCGAAAGAGTCTGGATTTTTAGGCTCCTTGCTCACAGTTaGGCCTGGATGAACTCAGGG +
Preference number: 4 (lower is better)
Translates to: WRTCCGLVLGIERVWIFRLLAHS*AWMNSG
Trigger: CCCTGAGTTCATCCAGGCCCAACTGTGAGCAAGGAG...CCTAAAAATCCAGACTCTTTCGATACCCAGGACCAAGCCACAGCAGGTCCTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp TTTGATGTGTCATCCTCTCTTGCTGATTTCATGACAGCAAGACAGGGGCAGCATCGTAAGGAGGGGGTTTaGGGGCAGCTGACCTGGAGG +
Preference number: 4 (lower is better)
Translates to: FDVSSSLADFMTARQGQHRKEGV*GQLTWR
Trigger: CCTCCAGGTCAGCTGCCCCCAAACCCCCTCCTTACG...ATGCTGCCCCTGTCTTGCTGTCATGAAATCAGCAAGAGAGGATGACACATCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR TCA 90 bp TGCAACTTCCCAAAATGTGCCCGAGGTGGAAGTACTTCCTGGCTAGTCGGTGTAAAGTGCCCAACTGCGTaGGCTTGTTACTCGTGCCTT +
Preference number: 4 (lower is better)
Translates to: CNFPKCARGGSTSWLVGVKCPTA*ACYSCL
Trigger: AAGGCACGAGTAACAAGCTCACGCAGTTGGGCACTT...TACACCGACTAGCCAGGAAGTACTTCCACCTCGGGCACATTTTGGGAAGTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR TCA 90 bp GTCAAGATAGAGCCAGCAGAGAGAACAGGGATCAAATCTGTCACAAACACACACGTGATGTTCATGGCCTaGGGCAGGCACTCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: VKIEPAERTGIKSVTNTHVMFMA*GRHSGW
Trigger: CCACCCAGAGTGCCTGCCTCAGGCCATGAACATCAC...GTGTGTGTTTGTGACAGATTTGATCCCTGTTCTCTCTGCTGGCTCTATCTTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR TCA 90 bp CTACCTGAATTCCACACTACTCATAATGCTACTGTCATTCGCACCTGTAAAATGCTGCCGGGCAGGTCTTaGCGCAGTGGGGGCCGTCAA +
Preference number: 4 (lower is better)
Translates to: LPEFHTTHNATVIRTCKMLPGRS*RSGGRQ
Trigger: TTGACGGCCCCCACTGCGTCAAGACCTGCCCGGCAG...CATTTTACAGGTGCGAATGACAGTAGCATTATGAGTAGTGTGGAATTCAGGTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR TCA 90 bp GTAAATGCTTCACAGTTTGAAGACAAAGGAATGCAACTTCCCAAAATGTGCCCGTGTGGCGCCTTCGCATaGAGAGGCCGATCCCCAGGG +
Preference number: 4 (lower is better)
Translates to: VNASQFEDKGMQLPKMCPCGAFA*RGRSPG
Trigger: CCCTGGGGATCGGCCTCTTCATGCGAAGGCGCCACA...CGGGCACATTTTGGGAAGTTGCATTCCTTTGTCTTCAAACTGTGAAGCATTTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR TCA 90 bp TTTGATGTGTCATCCTCTCTTGCTGATTTCATGACAGCAAGACAGGGGCAGCATGGCGCCTGTGGGGTCTaGGCTGTATCGCTGCAAGAA +
Preference number: 4 (lower is better)
Translates to: FDVSSSLADFMTARQGQHGACGV*AVSLQE
Trigger: TTCTTGCAGCGATACAGCTCAGACCCCACAGGCGCC...ATGCTGCCCCTGTCTTGCTGTCATGAAATCAGCAAGAGAGGATGACACATCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR TCA 90 bp CAAACAAGTCAGTCTAACGCTCATGACTGGAAACCACTGGTCCATCAGTGGGGATGTCGAATGTGCTGTTaGCACAGGTGGGCTGGACAG +
Preference number: 4 (lower is better)
Translates to: QTSQSNAHDWKPLVHQWGCRMCC*HRWAGQ
Trigger: CTGTCCAGCCCACCTGTGTCAACAGCACATTCGACA...TCCCCACTGATGGACCAGTGGTTTCCAGTCATGAGCGTTAGACTGACTTGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR TCA 90 bp CAAACAAGTCAGTCTAACGCTCATGACTGGAAACCACTGGTCCATCAGTGGGGAGTACCTGCCATGACTTaGTACAGTACCGATCCGGCC +
Preference number: 4 (lower is better)
Translates to: QTSQSNAHDWKPLVHQWGVPAMT*YSTDPA
Trigger: GGCCGGATCGGTACTGTATCAAGTCATGGCAGGTAC...TCCCCACTGATGGACCAGTGGTTTCCAGTCATGAGCGTTAGACTGACTTGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR TCA 90 bp CCAAAATGTGCCCGAGGTGGAAGTACTTCCTGGCTAGTCGGTGTAAACGTTGCATCCAAAGACCACATCTaGAGCTGGGGTCATGGGGTA +
Preference number: 4 (lower is better)
Translates to: PKCARGGSTSWLVGVNVASKDHI*SWGHGV
Trigger: TACCCCATGACCCCAGCTTCAGATGTGGTCTTTGGA...TGCAACGTTTACACCGACTAGCCAGGAAGTACTTCCACCTCGGGCACATTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR GCA 90 bp AGAGAGAACAGGGATCAAATCTGTCACAAACACACACATACACACACACACATAGGAGTCAGGGGGCCGTaGGCGGTGGTTGTGGCGTTG +
Preference number: 4 (lower is better)
Translates to: RENRDQICHKHTHTHTHIGVRGP*AVVVAL
Trigger: CAACGCCACAACCACCGCGCACGGCCCCCTGACTCC...TATGTGTGTGTGTGTATGTGTGTGTTTGTGACAGATTTGATCCCTGTTCTCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR GCA 90 bp TGGAGGACCTGCTGTGGCTTGGTCCTGGGTATCGAAAGAGTCTGGATTTTTAGGTTCCGTTACACACTTTaGGGCAAGGCCCTTCGCACT +
Preference number: 4 (lower is better)
Translates to: WRTCCGLVLGIERVWIFRFRYTL*GKALRT
Trigger: AGTGCGAAGGGCCTTGCCGCAAAGTGTGTAACGGAA...CCTAAAAATCCAGACTCTTTCGATACCCAGGACCAAGCCACAGCAGGTCCTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp CACAACAAAGAGCTTGTGCAGGCTCGGTCATGTGTTTATCTGCTCCTTACGCCCTTCCGTTACACACTTTaGGGCAAGGCCCTTCGCACT +
Preference number: 4 (lower is better)
Translates to: HNKELVQARSCVYLLLTPFRYTL*GKALRT
Trigger: AGTGCGAAGGGCCTTGCCGCAAAGTGTGTAACGGAA...GGGCGTAAGGAGCAGATAAACACATGACCGAGCCTGCACAAGCTCTTTGTTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR GCA 90 bp ATAACTTACTTAGAGAATGCAGAGGGTCCCAGGGCGTTTTCAAAGCTCAGGTGGGGAGTCACCCCTAAATaGCACCGGCAGGATGTGGAG +
Preference number: 4 (lower is better)
Translates to: ITYLENAEGPRAFSKLRWGVTPK*HRQDVE
Trigger: CTCCACATCCTGCCGGTGGCATTTAGGGGTGACTCC...CCACCTGAGCTTTGAAAACGCCCTGGGACCCTCTGCATTCTCTAAGTAAGTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR GCA 90 bp TGCAACTTCCCAAAATGTGCCCGAGGTGGAAGTACTTCCTGGCTAGTCGGTGTACAGTGCATCCGTAGGTaGAGTTTGGATGGCACAGGT +
Preference number: 4 (lower is better)
Translates to: CNFPKCARGGSTSWLVGVQCIRR*SLDGTG
Trigger: ACCTGTGCCATCCAAACTGCACCTACGGATGCACTG...TACACCGACTAGCCAGGAAGTACTTCCACCTCGGGCACATTTTGGGAAGTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp TGCAGTGGAAGCCTTGAAGCAGAACCACTGGAATCAAGCATCCTCTGGAAGACTCAAGACCTGGCCCAGTaGATCCGTAGGTGCAGTTTG +
Preference number: 4 (lower is better)
Translates to: CSGSLEAEPLESSILWKTQDLAQ*IRRCSL
Trigger: CAAACTGCACCTACGGATGCACTGGGCCAGGTCTTG...AGTCTTCCAGAGGATGCTTGATTCCAGTGGTTCTGCTTCAAGGCTTCCACTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp CAAACAACCAGACACAACAAAGAGCTTGTGCAGGCTCGGTCATGTGTTTATCTGGTCCCTTATACACCGTaGCGAACGCACCGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: QTTRHNKELVQARSCVYLVPYTP*RTHRSP
Trigger: TGGGCTCCGGTGCGTTCGGCACGGTGTATAAGGGAC...CAGATAAACACATGACCGAGCCTGCACAAGCTCTTTGTTGTGTCTGGTTGTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR GCA 90 bp GCAAACAACCAGACACAACAAAGAGCTTGTGCAGGCTCGGTCATGTGTTTATCTCCGAAGGGCATGAGCTaGGTGATGAGCTGCACGGTG +
Preference number: 4 (lower is better)
Translates to: ANNQTQQRACAGSVMCLSPKGMS*VMSCTV
Trigger: CACCGTGCAGCTCATCACGCAGCTCATGCCCTTCGG...AGATAAACACATGACCGAGCCTGCACAAGCTCTTTGTTGTGTCTGGTTGTTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR GCA 90 bp GAATTTGCCTCCAAGTCCATGTCCTTGTGGCTAATCCCTAGGCCAGTAGTTCTCCTGCTGAAGAAGCCCTaGTGTGGGATGAGGTACTCG +
Preference number: 4 (lower is better)
Translates to: EFASKSMSLWLIPRPVVLLLKKP*CGMRYS
Trigger: CGAGTACCTCATCCCACAGCAGGGCTTCTTCAGCAG...GAGAACTACTGGCCTAGGGATTAGCCACAAGGACATGGACTTGGAGGCAAATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR GCA 90 bp AGTCTAAGGAAGAATTCCATCCCCTCCGTTTCTTCTTTGCCCAGGAAGGGACAGGGAAGGTGTCGTCTATaGTGTCCTCAGTCAAGGCGC +
Preference number: 4 (lower is better)
Translates to: SLRKNSIPSVSSLPRKGQGRCRL*CPQSRR
Trigger: GCGCCTTGACTGAGGACAGCATAGACGACACCTTCC...CTGTCCCTTCCTGGGCAAAGAAGAAACGGAGGGGATGGAATTCTTCCTTAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp CCTCAAATTAGGAGATACGTTTTTGCGAGAACAAAAGCGGTGCTATCCTTAGGTCTCGGGGTTGCCCACTaGAGTGCTGTGGGGGTCCTG +
Preference number: 4 (lower is better)
Translates to: PQIRRYVFARTKAVLSLGLGVAH*SAVGVL
Trigger: CAGGACCCCCACAGCACTGCAGTGGGCAACCCCGAG...ACCTAAGGATAGCACCGCTTTTGTTCTCGCAAAAACGTATCTCCTAATTTGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp TTGGGCAGCTCCTCTCCTGACCTGCCCATCACAGTCGCCAGATCCGTGAAGAGGAAAGGGCTTTCCTCTTaGCTCAACTTAACCCTTTTA +
Preference number: 4 (lower is better)
Translates to: LGSSSPDLPITVARSVKRKGLSS*LNLTLL
Trigger: TAAAAGGGTTAAGTTGAGGCAAGAGGAAAGCCCTTT...CCTCTTCACGGATCTGGCGACTGTGATGGGCAGGTCAGGAGAGGAGCTGCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CCA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAACGTGCGCGGTGGTTGTaGCGTTGGCGGCGAGGCGGG +
Preference number: 4 (lower is better)
Translates to: EIVERKCSFSGRLKSDSERARWL*RWRRGG
Trigger: CCCGCCTCGCCGCCAACGCCACAACCACCGCGCACG...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR CCA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAAGGGGGCCGTGCGCGGTaGTTGTGGCGTTGGCGGCGA +
Preference number: 4 (lower is better)
Translates to: EIVERKCSFSGRLKSDSEGGRAR*LWRWRR
Trigger: TCGCCGCCAACGCCACAACCACCGCGCACGGCCCCC...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR CCA 90 bp TGGAGGACCTGCTGTGGCTTGGTCCTGGGTATCGAAAGAGTCTGGATTTTTAGGCTTGGATCACACTTTTaGCAGCTGCCCAGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: WRTCCGLVLGIERVWIFRLGSHF*QLPRWF
Trigger: GAACCACCTGGGCAGCTGCCAAAAGTGTGATCCAAG...CCTAAAAATCCAGACTCTTTCGATACCCAGGACCAAGCCACAGCAGGTCCTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CCA 90 bp CAAACAAGTCAGTCTAACGCTCATGACTGGAAACCACTGGTCCATCAGTGGGGACCCAGCAGCTCCCATTaGGACAGCTTGGATCACACT +
Preference number: 4 (lower is better)
Translates to: QTSQSNAHDWKPLVHQWGPSSSH*DSLDHT
Trigger: AGTGTGATCCAAGCTGTCCCAATGGGAGCTGCTGGG...TCCCCACTGATGGACCAGTGGTTTCCAGTCATGAGCGTTAGACTGACTTGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp TGGAGGACCTGCTGTGGCTTGGTCCTGGGTATCGAAAGAGTCTGGATTTTTAGGAGGTGTCCTTGCACGTaGCTTCGTCTCGGAATTTGC +
Preference number: 4 (lower is better)
Translates to: WRTCCGLVLGIERVWIFRRCPCT*LRLGIC
Trigger: GCAAATTCCGAGACGAAGCCACGTGCAAGGACACCT...CCTAAAAATCCAGACTCTTTCGATACCCAGGACCAAGCCACAGCAGGTCCTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp CACAACAAAGAGCTTGTGCAGGCTCGGTCATGTGTTTATCTGCTCCTTACGCCCAGGTGTCCTTGCACGTaGCTTCGTCTCGGAATTTGC +
Preference number: 4 (lower is better)
Translates to: HNKELVQARSCVYLLLTPRCPCT*LRLGIC
Trigger: GCAAATTCCGAGACGAAGCCACGTGCAAGGACACCT...GGGCGTAAGGAGCAGATAAACACATGACCGAGCCTGCACAAGCTCTTTGTTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CCA 90 bp CCAAAATGTGCCCGAGGTGGAAGTACTTCCTGGCTAGTCGGTGTAAACGTTGCACTCCACAAACTCCCTTaGCTCACCCTCCAGAAGGTT +
Preference number: 4 (lower is better)
Translates to: PKCARGGSTSWLVGVNVALHKLP*LTLQKV
Trigger: AACCTTCTGGAGGGTGAGCCAAGGGAGTTTGTGGAG...TGCAACGTTTACACCGACTAGCCAGGAAGTACTTCCACCTCGGGCACATTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp CCTGCTGTGGCTTGGTCCTGGGTATCGAAAGAGTCTGGATTTTTAGGGCTCATACTGGATACAGTTGTCTaGTCCCCGTCCTGTGCAGGT +
Preference number: 4 (lower is better)
Translates to: PAVAWSWVSKESGFLGLILDTVV*SPSCAG
Trigger: ACCTGCACAGGACGGGGACCAGACAACTGTATCCAG...TATGAGCCCTAAAAATCCAGACTCTTTCGATACCCAGGACCAAGCCACAGCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp TGCAGTGGAAGCCTTGAAGCAGAACCACTGGAATCAAGCATCCTCTGGAAGACTTCCGTAGGTGCAGTTTaGATGGCACAGGTGGCACAC +
Preference number: 4 (lower is better)
Translates to: CSGSLEAEPLESSILWKTSVGAV*MAQVAH
Trigger: GTGTGCCACCTGTGCCATCCAAACTGCACCTACGGA...AGTCTTCCAGAGGATGCTTGATTCCAGTGGTTCTGCTTCAAGGCTTCCACTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp CTTAGAGGGAGCAGGTTGTTTAGGGTGACTGACCTCAGCCTTATGTGGACTTTACGCTTCCGAACGATGTaGCGCCTTCGCATGAAGAGG +
Preference number: 4 (lower is better)
Translates to: LRGSRLFRVTDLSLMWTLRFRTM*RLRMKR
Trigger: CCTCTTCATGCGAAGGCGCCACATCGTTCGGAAGCG...TAAAGTCCACATAAGGCTGAGGTCAGTCACCCTAAACAACCTGCTCCCTCTAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CCA 90 bp CCAAAATGTGCCCGAGGTGGAAGTACTTCCTGGCTAGTCGGTGTAAACGTTGCATCAAGAGAGCTTGGTTaGGAGCTTCTCCACTGGGTG +
Preference number: 4 (lower is better)
Translates to: PKCARGGSTSWLVGVNVASRELG*ELLHWV
Trigger: CACCCAGTGGAGAAGCTCCCAACCAAGCTCTCTTGA...TGCAACGTTTACACCGACTAGCCAGGAAGTACTTCCACCTCGGGCACATTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp TGCAACTTCCCAAAATGTGCCCGAGGTGGAAGTACTTCCTGGCTAGTCGGTGTATCAAGAGAGCTTGGTTaGGAGCTTCTCCACTGGGTG +
Preference number: 4 (lower is better)
Translates to: CNFPKCARGGSTSWLVGVSRELG*ELLHWV
Trigger: CACCCAGTGGAGAAGCTCCCAACCAAGCTCTCTTGA...TACACCGACTAGCCAGGAAGTACTTCCACCTCGGGCACATTTTGGGAAGTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp CTACCTGAATTCCACACTACTCATAATGCTACTGTCATTCGCACCTGTAAAATGAGCAGGCGGCACACGTaGGGGTTGTCCACGCTGGCC +
Preference number: 4 (lower is better)
Translates to: LPEFHTTHNATVIRTCKMSRRHT*GLSTLA
Trigger: GGCCAGCGTGGACAACCCCCACGTGTGCCGCCTGCT...CATTTTACAGGTGCGAATGACAGTAGCATTATGAGTAGTGTGGAATTCAGGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp AACCAGACACAACAAAGAGCTTGTGCAGGCTCGGTCATGTGTTTATCTGCTCCTGAAGAAGCCCTGCTGTaGGATGAGGTACTCGTCGGC +
Preference number: 4 (lower is better)
Translates to: NQTQQRACAGSVMCLSAPEEALL*DEVLVG
Trigger: GCCGACGAGTACCTCATCCCACAGCAGGGCTTCTTC...AGGAGCAGATAAACACATGACCGAGCCTGCACAAGCTCTTTGTTGTGTCTGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CCA 90 bp CCAAAATGTGCCCGAGGTGGAAGTACTTCCTGGCTAGTCGGTGTAAACGTTGCAAGCCAGCGGGCCTTTTaGGAACGGACTGGTTTATGT +
Preference number: 4 (lower is better)
Translates to: PKCARGGSTSWLVGVNVASQRAF*ERTGLC
Trigger: ACATAAACCAGTCCGTTCCCAAAAGGCCCGCTGGCT...TGCAACGTTTACACCGACTAGCCAGGAAGTACTTCCACCTCGGGCACATTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp CCTGCTGTGGCTTGGTCCTGGGTATCGAAAGAGTCTGGATTTTTAGGGCTCATATCCAGGCTAATTTGGTaGCTGCCTTTCTGGGCCCAG +
Preference number: 4 (lower is better)
Translates to: PAVAWSWVSKESGFLGLISRLIW*LPFWAQ
Trigger: CTGGGCCCAGAAAGGCAGCCACCAAATTAGCCTGGA...TATGAGCCCTAAAAATCCAGACTCTTTCGATACCCAGGACCAAGCCACAGCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp TGGAGGACCTGCTGTGGCTTGGTCCTGGGTATCGAAAGAGTCTGGATTTTTAGGTTGTCCAGGCTAATTTaGTGGCTGCCTTTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: WRTCCGLVLGIERVWIFRLSRLI*WLPFWA
Trigger: GGCCCAGAAAGGCAGCCACCAAATTAGCCTGGACAA...CCTAAAAATCCAGACTCTTTCGATACCCAGGACCAAGCCACAGCAGGTCCTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp CAAACAAGTCAGTCTAACGCTCATGACTGGAAACCACTGGTCCATCAGTGGGGAGGACCTGCTGTGGCTTaGTCCTGGGTATCGAAAGAG +
Preference number: 4 (lower is better)
Translates to: QTSQSNAHDWKPLVHQWGGPAVA*SWVSKE
Trigger: CTCTTTCGATACCCAGGACCAAGCCACAGCAGGTCC...TCCCCACTGATGGACCAGTGGTTTCCAGTCATGAGCGTTAGACTGACTTGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp TGCAGTGGAAGCCTTGAAGCAGAACCACTGGAATCAAGCATCCTCTGGAAGACTATGGAGGACCTGCTGTaGCTTGGTCCTGGGTATCGA +
Preference number: 4 (lower is better)
Translates to: CSGSLEAEPLESSILWKTMEDLL*LGPGYR
Trigger: TCGATACCCAGGACCAAGCCACAGCAGGTCCTCCAT...AGTCTTCCAGAGGATGCTTGATTCCAGTGGTTCTGCTTCAAGGCTTCCACTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp CAAACAAGTCAGTCTAACGCTCATGACTGGAAACCACTGGTCCATCAGTGGGGAATGGAGGACCTGCTGTaGCTTGGTCCTGGGTATCGA +
Preference number: 4 (lower is better)
Translates to: QTSQSNAHDWKPLVHQWGMEDLL*LGPGYR
Trigger: TCGATACCCAGGACCAAGCCACAGCAGGTCCTCCAT...TCCCCACTGATGGACCAGTGGTTTCCAGTCATGAGCGTTAGACTGACTTGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp CAAACAAGTCAGTCTAACGCTCATGACTGGAAACCACTGGTCCATCAGTGGGGACTCCTTGCTCACAGTTaGGCCTGGATGAACTCAGGG +
Preference number: 4 (lower is better)
Translates to: QTSQSNAHDWKPLVHQWGLLAHS*AWMNSG
Trigger: CCCTGAGTTCATCCAGGCCCAACTGTGAGCAAGGAG...TCCCCACTGATGGACCAGTGGTTTCCAGTCATGAGCGTTAGACTGACTTGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp CCGCCCTTGAGAACCAGTGCCTTTCCTGCTAAGCAATCCATAGTCCCCTTATGTGACCTCAGCCTTATGTaGACTTTAGCAGTGGAGGCC +
Preference number: 4 (lower is better)
Translates to: PPLRTSAFPAKQSIVPLCDLSLM*TLAVEA
Trigger: GGCCTCCACTGCTAAAGTCCACATAAGGCTGAGGTC...ACATAAGGGGACTATGGATTGCTTAGCAGGAAAGGCACTGGTTCTCAAGGGCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CCA 90 bp GAATTTGCCTCCAAGTCCATGTCCTTGTGGCTAATCCCTAGGCCAGTAGTTCTCACAAAGCTGTACCCCTaGTATGGCAGGTGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: EFASKSMSLWLIPRPVVLTKLYP*YGRCGW
Trigger: CCAGCCACACCTGCCATACCAGGGGTACAGCTTTGT...GAGAACTACTGGCCTAGGGATTAGCCACAAGGACATGGACTTGGAGGCAAATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CCA 90 bp GTGAAGAGGCTAAGGGCTTTGCGGCTTCTACCAGACAGAACTGTGCCTCCCTGGTGTACAGGGTTACACTaGCAGATGATGAGAGTATGG +
Preference number: 4 (lower is better)
Translates to: VKRLRALRLLPDRTVPPWCTGLH*QMMRVW
Trigger: CCATACTCTCATCATCTGCCAGTGTAACCCTGTACA...CCAGGGAGGCACAGTTCTGTCTGGTAGAAGCCGCAAAGCCCTTAGCCTCTTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR TCA 90 bp TGGAGGACCTGCTGTGGCTTGGTCCTGGGTATCGAAAGAGTCTGGATTTTTAGGCATCACTTATCTCCTTaGGGGAGCGTAATCCCAAGG +
Preference number: 4 (lower is better)
Translates to: WRTCCGLVLGIERVWIFRHHLSP*GSVIPR
Trigger: CCTTGGGATTACGCTCCCTCAAGGAGATAAGTGATG...CCTAAAAATCCAGACTCTTTCGATACCCAGGACCAAGCCACAGCAGGTCCTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR TCA 90 bp CAAGATAGAGCCAGCAGAGAGAACAGGGATCAAATCTGTCACAAACACACACATATTCCCTGCCTCGGCTaGCATTCCGGCAAGAGACGC +
Preference number: 4 (lower is better)
Translates to: QDRASRENRDQICHKHTHIPCLG*HSGKRR
Trigger: GCGTCTCTTGCCGGAATGTCAGCCGAGGCAGGGAAT...ATGTGTGTGTTTGTGACAGATTTGATCCCTGTTCTCTCTGCTGGCTCTATCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR TCA 90 bp ATTGGAATGACCTCAGGAGCTTTAAAAACTACGAATGCTTGGGTTTCAGCCCCAGTGATGTTCATGGCCTaGGGCAGGCACTCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: IGMTSGALKTTNAWVSAPVMFMA*GRHSGW
Trigger: CCACCCAGAGTGCCTGCCTCAGGCCATGAACATCAC...TGGGGCTGAAACCCAAGCATTCGTAGTTTTTAAAGCTCCTGAGGTCATTCCAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR TCA 90 bp AACCAGACACAACAAAGAGCTTGTGCAGGCTCGGTCATGTGTTTATCTGCTCCTTTTCATCCCCCTGAATaGCAAGGTAGCGCTGGGGGT +
Preference number: 4 (lower is better)
Translates to: NQTQQRACAGSVMCLSAPFHPPE*QGSAGG
Trigger: ACCCCCAGCGCTACCTTGTCATTCAGGGGGATGAAA...AGGAGCAGATAAACACATGACCGAGCCTGCACAAGCTCTTTGTTGTGTCTGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR TCA 90 bp CCTCAAATTAGGAGATACGTTTTTGCGAGAACAAAAGCGGTGCTATCCTTAGGTACGTGGAGGGGCTGCTaGAGAAGCCCTGCTGTGGGA +
Preference number: 4 (lower is better)
Translates to: PQIRRYVFARTKAVLSLGTWRGC*RSPAVG
Trigger: TCCCACAGCAGGGCTTCTTCAGCAGCCCCTCCACGT...ACCTAAGGATAGCACCGCTTTTGTTCTCGCAAAAACGTATCTCCTAATTTGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR TCA 90 bp CCTGCTGTGGCTTGGTCCTGGGTATCGAAAGAGTCTGGATTTTTAGGGCTCATAAGAAGCTGTCTTCCTTaGTGGGACAGCTTTGCAGCC +
Preference number: 4 (lower is better)
Translates to: PAVAWSWVSKESGFLGLIRSCLP*WDSFAA
Trigger: GGCTGCAAAGCTGTCCCATCAAGGAAGACAGCTTCT...TATGAGCCCTAAAAATCCAGACTCTTTCGATACCCAGGACCAAGCCACAGCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR TCA 90 bp TGGAGGACCTGCTGTGGCTTGGTCCTGGGTATCGAAAGAGTCTGGATTTTTAGGATGGAGTCCAAGCTTTaGGTACTGACTGATCAGGGC +
Preference number: 4 (lower is better)
Translates to: WRTCCGLVLGIERVWIFRMESKL*VLTDQG
Trigger: GCCCTGATCAGTCAGTACTCAAAGCTTGGACTCCAT...CCTAAAAATCCAGACTCTTTCGATACCCAGGACCAAGCCACAGCAGGTCCTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR GCA 90 bp CCTGCTGTGGCTTGGTCCTGGGTATCGAAAGAGTCTGGATTTTTAGGGCTCATATTCCGTTACACACTTTaGGGCAAGGCCCTTCGCACT +
Preference number: 4 (lower is better)
Translates to: PAVAWSWVSKESGFLGLIFRYTL*GKALRT
Trigger: AGTGCGAAGGGCCTTGCCGCAAAGTGTGTAACGGAA...TATGAGCCCTAAAAATCCAGACTCTTTCGATACCCAGGACCAAGCCACAGCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp GCAAACAACCAGACACAACAAAGAGCTTGTGCAGGCTCGGTCATGTGTTTATCTGGAGTCACCCCTAAATaGCACCGGCAGGATGTGGAG +
Preference number: 4 (lower is better)
Translates to: ANNQTQQRACAGSVMCLSGVTPK*HRQDVE
Trigger: CTCCACATCCTGCCGGTGGCATTTAGGGGTGACTCC...AGATAAACACATGACCGAGCCTGCACAAGCTCTTTGTTGTGTCTGGTTGTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR GCA 90 bp GCAAACAACCAGACACAACAAAGAGCTTGTGCAGGCTCGGTCATGTGTTTATCTTTCTCCCATGACTCCTaGCGGGCAGGTCTTGACGCA +
Preference number: 4 (lower is better)
Translates to: ANNQTQQRACAGSVMCLSFSHDS*RAGLDA
Trigger: TGCGTCAAGACCTGCCCGGCAGGAGTCATGGGAGAA...AGATAAACACATGACCGAGCCTGCACAAGCTCTTTGTTGTGTCTGGTTGTTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR GCA 90 bp CCTCAAATTAGGAGATACGTTTTTGCGAGAACAAAAGCGGTGCTATCCTTAGGTACAAGCTCCCTCTCCTaGAGCAGCCTCCGCAGCGTG +
Preference number: 4 (lower is better)
Translates to: PQIRRYVFARTKAVLSLGTSSLS*SSLRSV
Trigger: CACGCTGCGGAGGCTGCTGCAGGAGAGGGAGCTTGT...ACCTAAGGATAGCACCGCTTTTGTTCTCGCAAAAACGTATCTCCTAATTTGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp TGGAGGACCTGCTGTGGCTTGGTCCTGGGTATCGAAAGAGTCTGGATTTTTAGGAAGACTTGTGGCTTGTaGTCCTTGCTCACAGTTGGG +
Preference number: 4 (lower is better)
Translates to: WRTCCGLVLGIERVWIFRKTCGL*SLLTVG
Trigger: CCCAACTGTGAGCAAGGAGCACAAGCCACAAGTCTT...CCTAAAAATCCAGACTCTTTCGATACCCAGGACCAAGCCACAGCAGGTCCTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp AGTCTAAGGAAGAATTCCATCCCCTCCGTTTCTTCTTTGCCCAGGAAGGGACAGCCTCCGTTTCTTCTTTaGCCAGGAAGGGACAGAGTG +
Preference number: 4 (lower is better)
Translates to: SLRKNSIPSVSSLPRKGQPPFLL*PGRDRV
Trigger: CACTCTGTCCCTTCCTGGGCAAAGAAGAAACGGAGG...CTGTCCCTTCCTGGGCAAAGAAGAAACGGAGGGGATGGAATTCTTCCTTAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp CAGCTGTGGGCTATTGGTCCAAATGCTGATGAATCCAATGTGGGCTGGAATCCGCAGATGATTCTTTTCTaGCTGAGGGGAGGTGCTGAG +
Preference number: 4 (lower is better)
Translates to: QLWAIGPNADESNVGWNPQMILF*LRGGAE
Trigger: CTCAGCACCTCCCCTCAGGCAGAAAAGAATCATCTG...CGGATTCCAGCCCACATTGGATTCATCAGCATTTGGACCAATAGCCCACAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CCA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAACGGACGCCGACGAGGTaGCCTGTCGTCCGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: EIVERKCSFSGRLKSDSERTPTR*PVVRSG
Trigger: CCCAGACCGGACGACAGGCCACCTCGTCGGCGTCCG...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR CCA 90 bp CCGCCCTTGAGAACCAGTGCCTTTCCTGCTAAGCAATCCATAGTCCCCTTATGTCCTGTAAATTTCTCATaGGCAGCTCCTTCAGTCCGG +
Preference number: 4 (lower is better)
Translates to: PPLRTSAFPAKQSIVPLCPVNFS*AAPSVR
Trigger: CCGGACTGAAGGAGCTGCCCATGAGAAATTTACAGG...ACATAAGGGGACTATGGATTGCTTAGCAGGAAAGGCACTGGTTCTCAAGGGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CCA 90 bp CAGCTGTGGGCTATTGGTCCAAATGCTGATGAATCCAATGTGGGCTGGAATCCGCCTGTAAATTTCTCATaGGCAGCTCCTTCAGTCCGG +
Preference number: 4 (lower is better)
Translates to: QLWAIGPNADESNVGWNPPVNFS*AAPSVR
Trigger: CCGGACTGAAGGAGCTGCCCATGAGAAATTTACAGG...CGGATTCCAGCCCACATTGGATTCATCAGCATTTGGACCAATAGCCCACAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp CCTGCTGTGGCTTGGTCCTGGGTATCGAAAGAGTCTGGATTTTTAGGGCTCATACTGCCCAGGTGGTTCTaGAAGTCCATCGACATGTTG +
Preference number: 4 (lower is better)
Translates to: PAVAWSWVSKESGFLGLILPRWF*KSIDML
Trigger: CAACATGTCGATGGACTTCCAGAACCACCTGGGCAG...TATGAGCCCTAAAAATCCAGACTCTTTCGATACCCAGGACCAAGCCACAGCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CCA 90 bp GCAAACAACCAGACACAACAAAGAGCTTGTGCAGGCTCGGTCATGTGTTTATCTCGCCCGGAGCACTGCTaGGCACAGATGATTTTGGTC +
Preference number: 4 (lower is better)
Translates to: ANNQTQQRACAGSVMCLSRPEHC*AQMILV
Trigger: GACCAAAATCATCTGTGCCCAGCAGTGCTCCGGGCG...AGATAAACACATGACCGAGCCTGCACAAGCTCTTTGTTGTGTCTGGTTGTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CCA 90 bp TTTGATGTGTCATCCTCTCTTGCTGATTTCATGACAGCAAGACAGGGGCAGCATCTGAGGCAGGCACTCTaGGTGGCACTGTATGCACTC +
Preference number: 4 (lower is better)
Translates to: FDVSSSLADFMTARQGQHLRQAL*VALYAL
Trigger: GAGTGCATACAGTGCCACCCAGAGTGCCTGCCTCAG...ATGCTGCCCCTGTCTTGCTGTCATGAAATCAGCAAGAGAGGATGACACATCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp CAAACAACCAGACACAACAAAGAGCTTGTGCAGGCTCGGTCATGTGTTTATCTGCGCTTCCGAACGATGTaGCGCCTTCGCATGAAGAGG +
Preference number: 4 (lower is better)
Translates to: QTTRHNKELVQARSCVYLRFRTM*RLRMKR
Trigger: CCTCTTCATGCGAAGGCGCCACATCGTTCGGAAGCG...CAGATAAACACATGACCGAGCCTGCACAAGCTCTTTGTTGTGTCTGGTTGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CCA 90 bp TGCAGTGGAAGCCTTGAAGCAGAACCACTGGAATCAAGCATCCTCTGGAAGACTTGGAGGAGATCTCGCTaGCAGGGATTCCGTCATATG +
Preference number: 4 (lower is better)
Translates to: CSGSLEAEPLESSILWKTWRRSR*QGFRHM
Trigger: CATATGACGGAATCCCTGCCAGCGAGATCTCCTCCA...AGTCTTCCAGAGGATGCTTGATTCCAGTGGTTCTGCTTCAAGGCTTCCACTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp ATAACTTACTTAGAGAATGCAGAGGGTCCCAGGGCGTTTTCAAAGCTCAGGTGGGATGGTACATATGGGTaGCTGAGGGAGGCGTTCTCC +
Preference number: 4 (lower is better)
Translates to: ITYLENAEGPRAFSKLRWDGTYG*LREAFS
Trigger: GGAGAACGCCTCCCTCAGCCACCCATATGTACCATC...CCACCTGAGCTTTGAAAACGCCCTGGGACCCTCTGCATTCTCTAAGTAAGTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CCA 90 bp AGTCTAAGGAAGAATTCCATCCCCTCCGTTTCTTCTTTGCCCAGGAAGGGACAGCATCGATGGTACATATaGGTGGCTGAGGGAGGCGTT +
Preference number: 4 (lower is better)
Translates to: SLRKNSIPSVSSLPRKGQHRWYI*VAEGGV
Trigger: AACGCCTCCCTCAGCCACCCATATGTACCATCGATG...CTGTCCCTTCCTGGGCAAAGAAGAAACGGAGGGGATGGAATTCTTCCTTAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp TGGAGGACCTGCTGTGGCTTGGTCCTGGGTATCGAAAGAGTCTGGATTTTTAGGCAATGCAAGCCACGGTaGAATTGTTGCTGGTTGCAC +
Preference number: 4 (lower is better)
Translates to: WRTCCGLVLGIERVWIFRQCKPR*NCCWLH
Trigger: GTGCAACCAGCAACAATTCCACCGTGGCTTGCATTG...CCTAAAAATCCAGACTCTTTCGATACCCAGGACCAAGCCACAGCAGGTCCTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp AGTCTAAGGAAGAATTCCATCCCCTCCGTTTCTTCTTTGCCCAGGAAGGGACAGAGCCAGCGGGCCTTTTaGGAACGGACTGGTTTATGT +
Preference number: 4 (lower is better)
Translates to: SLRKNSIPSVSSLPRKGQSQRAF*ERTGLC
Trigger: ACATAAACCAGTCCGTTCCCAAAAGGCCCGCTGGCT...CTGTCCCTTCCTGGGCAAAGAAGAAACGGAGGGGATGGAATTCTTCCTTAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp CCTCAAATTAGGAGATACGTTTTTGCGAGAACAAAAGCGGTGCTATCCTTAGGTAGTGTGGGTCTCTGCTaGGCGCGGGGTTCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: PQIRRYVFARTKAVLSLGSVGLC*ARGSEA
Trigger: AGCCTCTGAACCCCGCGCCCAGCAGAGACCCACACT...ACCTAAGGATAGCACCGCTTTTGTTCTCGCAAAAACGTATCTCCTAATTTGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp CCGCCCTTGAGAACCAGTGCCTTTCCTGCTAAGCAATCCATAGTCCCCTTATGTTTGGCTTGGCTTCCTTaGGAAAGAAGTCCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: PPLRTSAFPAKQSIVPLCLAWLP*ERSPAG
Trigger: ACCAGCAGGACTTCTTTCCCAAGGAAGCCAAGCCAA...ACATAAGGGGACTATGGATTGCTTAGCAGGAAAGGCACTGGTTCTCAAGGGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CCA 90 bp CAGCTGTGGGCTATTGGTCCAAATGCTGATGAATCCAATGTGGGCTGGAATCCGTTGGCTTGGCTTCCTTaGGAAAGAAGTCCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: QLWAIGPNADESNVGWNPLAWLP*ERSPAG
Trigger: ACCAGCAGGACTTCTTTCCCAAGGAAGCCAAGCCAA...CGGATTCCAGCCCACATTGGATTCATCAGCATTTGGACCAATAGCCCACAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp CAAACAAGTCAGTCTAACGCTCATGACTGGAAACCACTGGTCCATCAGTGGGGACCTCTGGAAGACTTGTaGCTTGTGCTCCTTGCTCAC +
Preference number: 4 (lower is better)
Translates to: QTSQSNAHDWKPLVHQWGPLEDL*LVLLAH
Trigger: GTGAGCAAGGAGCACAAGCCACAAGTCTTCCAGAGG...TCCCCACTGATGGACCAGTGGTTTCCAGTCATGAGCGTTAGACTGACTTGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp AGGGCTTTGCGGCTTCTACCAGACAGAACTGTGCCTCCCTGGACAGATGAAGTGTTGAAGCAGAACCACTaGAATCAAGCATCCTCTGGA +
Preference number: 4 (lower is better)
Translates to: RALRLLPDRTVPPWTDEVLKQNH*NQASSG
Trigger: TCCAGAGGATGCTTGATTCCAGTGGTTCTGCTTCAA...CACTTCATCTGTCCAGGGAGGCACAGTTCTGTCTGGTAGAAGCCGCAAAGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CCA 90 bp TGCAGTGGAAGCCTTGAAGCAGAACCACTGGAATCAAGCATCCTCTGGAAGACTTTCTCTGATCCCTCATaGGGTGACGGGCATGGTGTA +
Preference number: 4 (lower is better)
Translates to: CSGSLEAEPLESSILWKTFSDPS*GDGHGV
Trigger: TACACCATGCCCGTCACCCCATGAGGGATCAGAGAA...AGTCTTCCAGAGGATGCTTGATTCCAGTGGTTCTGCTTCAAGGCTTCCACTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CCA 90 bp CAAACAAGTCAGTCTAACGCTCATGACTGGAAACCACTGGTCCATCAGTGGGGACCCATTGGGACAGCTTaGATCACACTTTTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: QTSQSNAHDWKPLVHQWGPIGTA*ITLLAL
Trigger: CAGGGCCAAAAGTGTGATCCAAGCTGTCCCAATGGG...TCCCCACTGATGGACCAGTGGTTTCCAGTCATGAGCGTTAGACTGACTTGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454757.6
CDS-3UTR CCA 90 bp CAAACAACCAGACACAACAAAGAGCTTGTGCAGGCTCGGTCATGTGTTTATCTGTTGGACACTGGAGACTaGCTGCTGCTGAGTGGGTCG +
Preference number: 4 (lower is better)
Translates to: QTTRHNKELVQARSCVYLLDTGD*LLLSGS
Trigger: CGACCCACTCAGCAGCAGCCAGTCTCCAGTGTCCAA...CAGATAAACACATGACCGAGCCTGCACAAGCTCTTTGTTGTGTCTGGTTGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CCA 90 bp GTCAAGATAGAGCCAGCAGAGAGAACAGGGATCAAATCTGTCACAAACACACACCACTGTTTCCCCCTCTaGAGATGCTGGAGGGAGCAC +
Preference number: 4 (lower is better)
Translates to: VKIEPAERTGIKSVTNTHHCFPL*RCWREH
Trigger: GTGCTCCCTCCAGCATCTCCAGAGGGGGAAACAGTG...GTGTGTGTTTGTGACAGATTTGATCCCTGTTCTCTCTGCTGGCTCTATCTTGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR TCA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAACTGCCGGGCAGGTCTTaGCGCAGTGGGGGCCGTCAA +
Preference number: 4 (lower is better)
Translates to: EIVERKCSFSGRLKSDSELPGRS*RSGGRQ
Trigger: TTGACGGCCCCCACTGCGTCAAGACCTGCCCGGCAG...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR TCA 90 bp TTTGATGTGTCATCCTCTCTTGCTGATTTCATGACAGCAAGACAGGGGCAGCATTCTGCACACACCAGTTaGGCAGGTACTGGGAGCCAA +
Preference number: 4 (lower is better)
Translates to: FDVSSSLADFMTARQGQHSAHTS*AGTGSQ
Trigger: TTGGCTCCCAGTACCTGCTCAACTGGTGTGTGCAGA...ATGCTGCCCCTGTCTTGCTGTCATGAAATCAGCAAGAGAGGATGACACATCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR TCA 90 bp TTTGATGTGTCATCCTCTCTTGCTGATTTCATGACAGCAAGACAGGGGCAGCATGTACATATGGGTGGCTaGGGGAGGCGTTCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: FDVSSSLADFMTARQGQHVHMGG*GRRSPF
Trigger: GAAAGGAGAACGCCTCCCTCAGCCACCCATATGTAC...ATGCTGCCCCTGTCTTGCTGTCATGAAATCAGCAAGAGAGGATGACACATCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR TCA 90 bp AGTCACAACATCAAGAACTTTCAGCAAACACCTAAGCTTTGGTGTCATCAGCTGAGCCCTGCTGTGGGATaGGGTACTCGTCGGCATCCA +
Preference number: 4 (lower is better)
Translates to: SHNIKNFQQTPKLWCHQLSPAVG*GTRRHP
Trigger: TGGATGCCGACGAGTACCTCATCCCACAGCAGGGCT...CAGCTGATGACACCAAAGCTTAGGTGTTTGCTGAAAGTTCTTGATGTTGTGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR TCA 90 bp AAGATAGAGCCAGCAGAGAGAACAGGGATCAAATCTGTCACAAACACACACATAAGCCCTGCTGTGGGATaGGGTACTCGTCGGCATCCA +
Preference number: 4 (lower is better)
Translates to: KIEPAERTGIKSVTNTHISPAVG*GTRRHP
Trigger: TGGATGCCGACGAGTACCTCATCCCACAGCAGGGCT...TATGTGTGTGTTTGTGACAGATTTGATCCCTGTTCTCTCTGCTGGCTCTATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR TCA 90 bp TGCAACTTCCCAAAATGTGCCCGAGGTGGAAGTACTTCCTGGCTAGTCGGTGTACTACTGTACCTGCCATaGCTTGATACAGTACCGATC +
Preference number: 4 (lower is better)
Translates to: CNFPKCARGGSTSWLVGVLLYLP*LDTVPI
Trigger: GATCGGTACTGTATCAAGTCATGGCAGGTACAGTAG...TACACCGACTAGCCAGGAAGTACTTCCACCTCGGGCACATTTTGGGAAGTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR TCA 90 bp CAAACAAGTCAGTCTAACGCTCATGACTGGAAACCACTGGTCCATCAGTGGGGAATGCCCCAAAGGACCTaGTGCATTTCATCTGAGCCT +
Preference number: 4 (lower is better)
Translates to: QTSQSNAHDWKPLVHQWGMPQRT*CISSEP
Trigger: AGGCTCAGATGAAATGCATCAGGTCCTTTGGGGCAT...TCCCCACTGATGGACCAGTGGTTTCCAGTCATGAGCGTTAGACTGACTTGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR TCA 90 bp TGCAGTGGAAGCCTTGAAGCAGAACCACTGGAATCAAGCATCCTCTGGAAGACTGAGACACTTTTTGTGTaGCAAAGCGTAAGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: CSGSLEAEPLESSILWKTETLFV*QSVRRG
Trigger: CCCCCTCCTTACGCTTTGTCACACAAAAAGTGTCTC...AGTCTTCCAGAGGATGCTTGATTCCAGTGGTTCTGCTTCAAGGCTTCCACTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR TCA 90 bp TGCAGTGGAAGCCTTGAAGCAGAACCACTGGAATCAAGCATCCTCTGGAAGACTGCCTCCCTGGACAGATaGAGTGAGAACTATTTTGGG +
Preference number: 4 (lower is better)
Translates to: CSGSLEAEPLESSILWKTASLDR*SENYFG
Trigger: CCCAAAATAGTTCTCACTTCATCTGTCCAGGGAGGC...AGTCTTCCAGAGGATGCTTGATTCCAGTGGTTCTGCTTCAAGGCTTCCACTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR TCA 90 bp CAGCTGTGGGCTATTGGTCCAAATGCTGATGAATCCAATGTGGGCTGGAATCCGATCAGGGCTGTTAGGTaGAAATCATGGGACTTTGGG +
Preference number: 4 (lower is better)
Translates to: QLWAIGPNADESNVGWNPIRAVR*KSWDFG
Trigger: CCCAAAGTCCCATGATTTTCACCTAACAGCCCTGAT...CGGATTCCAGCCCACATTGGATTCATCAGCATTTGGACCAATAGCCCACAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR TCA 90 bp GTAAATGCTTCACAGTTTGAAGACAAAGGAATGCAACTTCCCAAAATGTGCCCGAAGGGCAGCCGCCCTTaGGAACCAGTGCCTTTCCTG +
Preference number: 4 (lower is better)
Translates to: VNASQFEDKGMQLPKMCPKGSRP*EPVPFL
Trigger: CAGGAAAGGCACTGGTTCTCAAGGGCGGCTGCCCTT...CGGGCACATTTTGGGAAGTTGCATTCCTTTGTCTTCAAACTGTGAAGCATTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR TCA 90 bp TGCAACTTCCCAAAATGTGCCCGAGGTGGAAGTACTTCCTGGCTAGTCGGTGTATGCCCATTAGAATCATaGAAGAGCCCCCGAGATTTG +
Preference number: 4 (lower is better)
Translates to: CNFPKCARGGSTSWLVGVCPLES*KSPRDL
Trigger: CAAATCTCGGGGGCTCTTTCATGATTCTAATGGGCA...TACACCGACTAGCCAGGAAGTACTTCCACCTCGGGCACATTTTGGGAAGTTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR TCA 90 bp CTTAGAGGGAGCAGGTTGTTTAGGGTGACTGACCTCAGCCTTATGTGGACTTTATTGCCCCTTTCCAGCTaGACTGCTGGTGAGGATGAA +
Preference number: 4 (lower is better)
Translates to: LRGSRLFRVTDLSLMWTLLPLSS*TAGEDE
Trigger: TTCATCCTCACCAGCAGTTCAGCTGGAAAGGGGCAA...TAAAGTCCACATAAGGCTGAGGTCAGTCACCCTAAACAACCTGCTCCCTCTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR GCA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAAGGAGTCAGGGGGCCGTaGGCGGTGGTTGTGGCGTTG +
Preference number: 4 (lower is better)
Translates to: EIVERKCSFSGRLKSDSEGVRGP*AVVVAL
Trigger: CAACGCCACAACCACCGCGCACGGCCCCCTGACTCC...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR GCA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAAAGTCACTGGGGGACTTaGCACGGCAGCGCCCGGAGC +
Preference number: 4 (lower is better)
Translates to: EIVERKCSFSGRLKSDSESHWGT*HGSARS
Trigger: GCTCCGGGCGCTGCCGTGGCAAGTCCCCCAGTGACT...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR GCA 90 bp TTATTATTTGATGTGTCATCCTCTCTTGCTGATTTCATGACAGCAAGACAGGGGGGGGCCTGTGCAGCCTaGAGCACACTGGTTGTGGCA +
Preference number: 4 (lower is better)
Translates to: LLFDVSSSLADFMTARQGGACAA*STLVVA
Trigger: TGCCACAACCAGTGTGCTGCAGGCTGCACAGGCCCC...CCCCTGTCTTGCTGTCATGAAATCAGCAAGAGAGGATGACACATCAAATAATAA
50% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp TGCAACTTCCCAAAATGTGCCCGAGGTGGAAGTACTTCCTGGCTAGTCGGTGTAGTTCAGGCTGACGACTaGAAGAGAAAACTGACCATG +
Preference number: 4 (lower is better)
Translates to: CNFPKCARGGSTSWLVGVVQADD*KRKLTM
Trigger: CATGGTCAGTTTTCTCTTGCAGTCGTCAGCCTGAAC...TACACCGACTAGCCAGGAAGTACTTCCACCTCGGGCACATTTTGGGAAGTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp GTCAAGATAGAGCCAGCAGAGAGAACAGGGATCAAATCTGTCACAAACACACACCCTGGCCTGTGGCCTTaGAGCTGTTTTCACCTCTGT +
Preference number: 4 (lower is better)
Translates to: VKIEPAERTGIKSVTNTHPGLWP*SCFHLC
Trigger: ACAGAGGTGAAAACAGCTGCAAGGCCACAGGCCAGG...GTGTGTGTTTGTGACAGATTTGATCCCTGTTCTCTCTGCTGGCTCTATCTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR GCA 90 bp CCCTTTCCATTAACACTGCCCCAACAGAACCTGCCTCAGACCAAGCTAAATGTGCTGGGTGGCACTGTATaGACTCAGAGTTCTCCACAA +
Preference number: 4 (lower is better)
Translates to: PFPLTLPQQNLPQTKLNVLGGTV*TQSSPQ
Trigger: TTGTGGAGAACTCTGAGTGCATACAGTGCCACCCAG...CACATTTAGCTTGGTCTGAGGCAGGTTCTGTTGGGGCAGTGTTAATGGAAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR GCA 90 bp CCTGCTGTGGCTTGGTCCTGGGTATCGAAAGAGTCTGGATTTTTAGGGCTCATACTGGGTGGCACTGTATaGACTCAGAGTTCTCCACAA +
Preference number: 4 (lower is better)
Translates to: PAVAWSWVSKESGFLGLILGGTV*TQSSPQ
Trigger: TTGTGGAGAACTCTGAGTGCATACAGTGCCACCCAG...TATGAGCCCTAAAAATCCAGACTCTTTCGATACCCAGGACCAAGCCACAGCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp GTAAATGCTTCACAGTTTGAAGACAAAGGAATGCAACTTCCCAAAATGTGCCCGAGCTGCGTGATGAGCTaGACGGTGGAGGTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: VNASQFEDKGMQLPKMCPSCVMS*TVEVRQ
Trigger: CTGCCTCACCTCCACCGTGCAGCTCATCACGCAGCT...CGGGCACATTTTGGGAAGTTGCATTCCTTTGTCTTCAAACTGTGAAGCATTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp AAGATAGAGCCAGCAGAGAGAACAGGGATCAAATCTGTCACAAACACACACATAAGCTGCGTGATGAGCTaGACGGTGGAGGTGAGGCAG +
Preference number: 4 (lower is better)
Translates to: KIEPAERTGIKSVTNTHISCVMS*TVEVRQ
Trigger: CTGCCTCACCTCCACCGTGCAGCTCATCACGCAGCT...TATGTGTGTGTTTGTGACAGATTTGATCCCTGTTCTCTCTGCTGGCTCTATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR GCA 90 bp GTAAATGCTTCACAGTTTGAAGACAAAGGAATGCAACTTCCCAAAATGTGCCCGCAGTACGTTCCTGGCTaGCAGGTCGCGGTGCACCAA +
Preference number: 4 (lower is better)
Translates to: VNASQFEDKGMQLPKMCPQYVPG*QVAVHQ
Trigger: TTGGTGCACCGCGACCTGGCAGCCAGGAACGTACTG...CGGGCACATTTTGGGAAGTTGCATTCCTTTGTCTTCAAACTGTGAAGCATTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp CAAACAAGTCAGTCTAACGCTCATGACTGGAAACCACTGGTCCATCAGTGGGGAGGAATTGTTGCTGGTTaGACTCAGAGAGCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: QTSQSNAHDWKPLVHQWGGIVAG*TQRAQE
Trigger: CTCCTGAGCTCTCTGAGTGCAACCAGCAACAATTCC...TCCCCACTGATGGACCAGTGGTTTCCAGTCATGAGCGTTAGACTGACTTGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp CCGCCCTTGAGAACCAGTGCCTTTCCTGCTAAGCAATCCATAGTCCCCTTATGTTCTGAGCTGTATCGCTaGAAGAAGCTGTCTTCCTTG +
Preference number: 4 (lower is better)
Translates to: PPLRTSAFPAKQSIVPLCSELYR*KKLSSL
Trigger: CAAGGAAGACAGCTTCTTGCAGCGATACAGCTCAGA...ACATAAGGGGACTATGGATTGCTTAGCAGGAAAGGCACTGGTTCTCAAGGGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR GCA 90 bp TGGAGGACCTGCTGTGGCTTGGTCCTGGGTATCGAAAGAGTCTGGATTTTTAGGTCTGAGCTGTATCGCTaGAAGAAGCTGTCTTCCTTG +
Preference number: 4 (lower is better)
Translates to: WRTCCGLVLGIERVWIFRSELYR*KKLSSL
Trigger: CAAGGAAGACAGCTTCTTGCAGCGATACAGCTCAGA...CCTAAAAATCCAGACTCTTTCGATACCCAGGACCAAGCCACAGCAGGTCCTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp AGTCACAACATCAAGAACTTTCAGCAAACACCTAAGCTTTGGTGTCATCAGCTGGGTTGCCCACTGCAGTaGTGTGGGGGTCCTGGTAGT +
Preference number: 4 (lower is better)
Translates to: SHNIKNFQQTPKLWCHQLGCPLQ*CGGPGS
Trigger: ACTACCAGGACCCCCACAGCACTGCAGTGGGCAACC...CAGCTGATGACACCAAAGCTTAGGTGTTTGCTGAAAGTTCTTGATGTTGTGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR GCA 90 bp CCTGCTGTGGCTTGGTCCTGGGTATCGAAAGAGTCTGGATTTTTAGGGCTCATAACTCAGGGTAGCAAGTaGTACCAGCAAGCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: PAVAWSWVSKESGFLGLITQGSK*YQQASS
Trigger: GGAAGAAGCTTGCTGGTAGCACTTGCTACCCTGAGT...TATGAGCCCTAAAAATCCAGACTCTTTCGATACCCAGGACCAAGCCACAGCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp CAGCTGTGGGCTATTGGTCCAAATGCTGATGAATCCAATGTGGGCTGGAATCCGTGTCATCAGCTGGAGTaGAATAGGATGCATCCACAG +
Preference number: 4 (lower is better)
Translates to: QLWAIGPNADESNVGWNPCHQLE*NRMHPQ
Trigger: CTGTGGATGCATCCTATTGCACTCCAGCTGATGACA...CGGATTCCAGCCCACATTGGATTCATCAGCATTTGGACCAATAGCCCACAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR GCA 90 bp CCTGCTGTGGCTTGGTCCTGGGTATCGAAAGAGTCTGGATTTTTAGGGCTCATACAGATAGGACAGACTTaGAGCCTCAGAGGACACACT +
Preference number: 4 (lower is better)
Translates to: PAVAWSWVSKESGFLGLIQIGQT*SLRGHT
Trigger: AGTGTGTCCTCTGAGGCTGCAAGTCTGTCCTATCTG...TATGAGCCCTAAAAATCCAGACTCTTTCGATACCCAGGACCAAGCCACAGCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CCA 90 bp ATTGGAATGACCTCAGGAGCTTTAAAAACTACGAATGCTTGGGTTTCAGCCCCACGCCCGGAGCACTGCTaGGCACAGATGATTTTGGTC +
Preference number: 4 (lower is better)
Translates to: IGMTSGALKTTNAWVSAPRPEHC*AQMILV
Trigger: GACCAAAATCATCTGTGCCCAGCAGTGCTCCGGGCG...TGGGGCTGAAACCCAAGCATTCGTAGTTTTTAAAGCTCCTGAGGTCATTCCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CCA 90 bp TTATTATTTGATGTGTCATCCTCTCTTGCTGATTTCATGACAGCAAGACAGGGGTGTGGCAGCAGTCACTaGGGGACTTGCCACGGCAGC +
Preference number: 4 (lower is better)
Translates to: LLFDVSSSLADFMTARQGCGSSH*GTCHGS
Trigger: GCTGCCGTGGCAAGTCCCCCAGTGACTGCTGCCACA...CCCCTGTCTTGCTGTCATGAAATCAGCAAGAGAGGATGACACATCAAATAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp GTCAAGATAGAGCCAGCAGAGAGAACAGGGATCAAATCTGTCACAAACACACACGTTGTAGAGCATGAGTaGGGGGCAGGTGTCCTTGCA +
Preference number: 4 (lower is better)
Translates to: VKIEPAERTGIKSVTNTHVVEHE*GAGVLA
Trigger: TGCAAGGACACCTGCCCCCCACTCATGCTCTACAAC...GTGTGTGTTTGTGACAGATTTGATCCCTGTTCTCTCTGCTGGCTCTATCTTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CCA 90 bp CCTCAAATTAGGAGATACGTTTTTGCGAGAACAAAAGCGGTGCTATCCTTAGGTGCCACCGGCAGGATGTaGAGATCGCCACTGATGGAG +
Preference number: 4 (lower is better)
Translates to: PQIRRYVFARTKAVLSLGATGRM*RSPLME
Trigger: CTCCATCAGTGGCGATCTCCACATCCTGCCGGTGGC...ACCTAAGGATAGCACCGCTTTTGTTCTCGCAAAAACGTATCTCCTAATTTGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp CACAACAAAGAGCTTGTGCAGGCTCGGTCATGTGTTTATCTGCTCCTTACGCCCAGGTTCTCAAAGGCATaGAGGTCCGTCCTGTTTTCA +
Preference number: 4 (lower is better)
Translates to: HNKELVQARSCVYLLLTPRFSKA*RSVLFS
Trigger: TGAAAACAGGACGGACCTCCATGCCTTTGAGAACCT...GGGCGTAAGGAGCAGATAAACACATGACCGAGCCTGCACAAGCTCTTTGTTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CCA 90 bp ACACAGATGTACACACATCATGAACACTCACACACACAGATGTGTATGTCCGTGGGCAGACCTGGCCTGTaGCCTTGCAGCTGTTTTCAC +
Preference number: 4 (lower is better)
Translates to: TQMYTHHEHSHTQMCMSVGRPGL*PCSCFH
Trigger: GTGAAAACAGCTGCAAGGCCACAGGCCAGGTCTGCC...CACGGACATACACATCTGTGTGTGTGAGTGTTCATGATGTGTGTACATCTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CCA 90 bp GTAAATGCTTCACAGTTTGAAGACAAAGGAATGCAACTTCCCAAAATGTGCCCGAAGGCATGGCAGACCTaGCCTGTGGCCTTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: VNASQFEDKGMQLPKMCPKAWQT*PVALQL
Trigger: CAGCTGCAAGGCCACAGGCCAGGTCTGCCATGCCTT...CGGGCACATTTTGGGAAGTTGCATTCCTTTGTCTTCAAACTGTGAAGCATTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp AAGATAGAGCCAGCAGAGAGAACAGGGATCAAATCTGTCACAAACACACACATAAAGGCATGGCAGACCTaGCCTGTGGCCTTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: KIEPAERTGIKSVTNTHIKAWQT*PVALQL
Trigger: CAGCTGCAAGGCCACAGGCCAGGTCTGCCATGCCTT...TATGTGTGTGTTTGTGACAGATTTGATCCCTGTTCTCTCTGCTGGCTCTATCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CCA 90 bp AACCAGACACAACAAAGAGCTTGTGCAGGCTCGGTCATGTGTTTATCTGCTCCTCTCCACAAACTCCCTTaGCTCACCCTCCAGAAGGTT +
Preference number: 4 (lower is better)
Translates to: NQTQQRACAGSVMCLSAPLHKLP*LTLQKV
Trigger: AACCTTCTGGAGGGTGAGCCAAGGGAGTTTGTGGAG...AGGAGCAGATAAACACATGACCGAGCCTGCACAAGCTCTTTGTTGTGTCTGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CCA 90 bp TTTGATGTGTCATCCTCTCTTGCTGATTTCATGACAGCAAGACAGGGGCAGCATCTGGATACAGTTGTCTaGTCCCCGTCCTGTGCAGGT +
Preference number: 4 (lower is better)
Translates to: FDVSSSLADFMTARQGQHLDTVV*SPSCAG
Trigger: ACCTGCACAGGACGGGGACCAGACAACTGTATCCAG...ATGCTGCCCCTGTCTTGCTGTCATGAAATCAGCAAGAGAGGATGACACATCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp CAAACAACCAGACACAACAAAGAGCTTGTGCAGGCTCGGTCATGTGTTTATCTGCTGGATACAGTTGTCTaGTCCCCGTCCTGTGCAGGT +
Preference number: 4 (lower is better)
Translates to: QTTRHNKELVQARSCVYLLDTVV*SPSCAG
Trigger: ACCTGCACAGGACGGGGACCAGACAACTGTATCCAG...CAGATAAACACATGACCGAGCCTGCACAAGCTCTTTGTTGTGTCTGGTTGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CCA 90 bp CCTCAAATTAGGAGATACGTTTTTGCGAGAACAAAAGCGGTGCTATCCTTAGGTCACAGGTGGCACACATaGCCGGCGTCTGCGTACTTC +
Preference number: 4 (lower is better)
Translates to: PQIRRYVFARTKAVLSLGHRWHT*PASAYF
Trigger: GAAGTACGCAGACGCCGGCCATGTGTGCCACCTGTG...ACCTAAGGATAGCACCGCTTTTGTTCTCGCAAAAACGTATCTCCTAATTTGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp ACACAGATGTACACACATCATGAACACTCACACACACAGATGTGTATGTCCGTGTTTGGATGGCACAGGTaGCACACATGGCCGGCGTCT +
Preference number: 4 (lower is better)
Translates to: TQMYTHHEHSHTQMCMSVFGWHR*HTWPAS
Trigger: AGACGCCGGCCATGTGTGCCACCTGTGCCATCCAAA...CACGGACATACACATCTGTGTGTGTGAGTGTTCATGATGTGTGTACATCTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CCA 90 bp ATAACTTACTTAGAGAATGCAGAGGGTCCCAGGGCGTTTTCAAAGCTCAGGTGGTGGAGGAGATCTCGCTaGCAGGGATTCCGTCATATG +
Preference number: 4 (lower is better)
Translates to: ITYLENAEGPRAFSKLRWWRRSR*QGFRHM
Trigger: CATATGACGGAATCCCTGCCAGCGAGATCTCCTCCA...CCACCTGAGCTTTGAAAACGCCCTGGGACCCTCTGCATTCTCTAAGTAAGTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CCA 90 bp AACCAGACACAACAAAGAGCTTGTGCAGGCTCGGTCATGTGTTTATCTGCTCCTTGGAGGAGATCTCGCTaGCAGGGATTCCGTCATATG +
Preference number: 4 (lower is better)
Translates to: NQTQQRACAGSVMCLSAPWRRSR*QGFRHM
Trigger: CATATGACGGAATCCCTGCCAGCGAGATCTCCTCCA...AGGAGCAGATAAACACATGACCGAGCCTGCACAAGCTCTTTGTTGTGTCTGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CCA 90 bp TGGAGGACCTGCTGTGGCTTGGTCCTGGGTATCGAAAGAGTCTGGATTTTTAGGCAACTCACGGAACTTTaGGCGACTATCTGCGTCTAT +
Preference number: 4 (lower is better)
Translates to: WRTCCGLVLGIERVWIFRQLTEL*ATICVY
Trigger: ATAGACGCAGATAGTCGCCCAAAGTTCCGTGAGTTG...CCTAAAAATCCAGACTCTTTCGATACCCAGGACCAAGCCACAGCAGGTCCTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp CAGCTGTGGGCTATTGGTCCAAATGCTGATGAATCCAATGTGGGCTGGAATCCGCAACTCACGGAACTTTaGGCGACTATCTGCGTCTAT +
Preference number: 4 (lower is better)
Translates to: QLWAIGPNADESNVGWNPQLTEL*ATICVY
Trigger: ATAGACGCAGATAGTCGCCCAAAGTTCCGTGAGTTG...CGGATTCCAGCCCACATTGGATTCATCAGCATTTGGACCAATAGCCCACAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp AGGGCTTTGCGGCTTCTACCAGACAGAACTGTGCCTCCCTGGACAGATGAAGTGGGAGTCTGTAGGACTTaGCAAATGCATTCTTTCATC +
Preference number: 4 (lower is better)
Translates to: RALRLLPDRTVPPWTDEVGVCRT*QMHSFI
Trigger: GATGAAAGAATGCATTTGCCAAGTCCTACAGACTCC...CACTTCATCTGTCCAGGGAGGCACAGTTCTGTCTGGTAGAAGCCGCAAAGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CCA 90 bp GAATTTGCCTCCAAGTCCATGTCCTTGTGGCTAATCCCTAGGCCAGTAGTTCTCCAATGCAAGCCACGGTaGAATTGTTGCTGGTTGCAC +
Preference number: 4 (lower is better)
Translates to: EFASKSMSLWLIPRPVVLQCKPR*NCCWLH
Trigger: GTGCAACCAGCAACAATTCCACCGTGGCTTGCATTG...GAGAACTACTGGCCTAGGGATTAGCCACAAGGACATGGACTTGGAGGCAAATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CCA 90 bp ATTGGAATGACCTCAGGAGCTTTAAAAACTACGAATGCTTGGGTTTCAGCCCCACAGTCAAGGCGCCTGTaGGGTCTGAGCTGTATCGCT +
Preference number: 4 (lower is better)
Translates to: IGMTSGALKTTNAWVSAPQSRRL*GLSCIA
Trigger: AGCGATACAGCTCAGACCCCACAGGCGCCTTGACTG...TGGGGCTGAAACCCAAGCATTCGTAGTTTTTAAAGCTCCTGAGGTCATTCCAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CCA 90 bp CAAGATAGAGCCAGCAGAGAGAACAGGGATCAAATCTGTCACAAACACACACATCAGTCAAGGCGCCTGTaGGGTCTGAGCTGTATCGCT +
Preference number: 4 (lower is better)
Translates to: QDRASRENRDQICHKHTHQSRRL*GLSCIA
Trigger: AGCGATACAGCTCAGACCCCACAGGCGCCTTGACTG...ATGTGTGTGTTTGTGACAGATTTGATCCCTGTTCTCTCTGCTGGCTCTATCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CCA 90 bp TTCTGCTCAAAGGGACAATATTCTTGCTGGATGCGTTTCTGTAAATGCTTCACAAGTGTGGGTCTCTGCTaGGCGCGGGGTTCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: FCSKGQYSCWMRFCKCFTSVGLC*ARGSEA
Trigger: AGCCTCTGAACCCCGCGCCCAGCAGAGACCCACACT...TGTGAAGCATTTACAGAAACGCATCCAGCAAGAATATTGTCCCTTTGAGCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp TGCAACTTCCCAAAATGTGCCCGAGGTGGAAGTACTTCCTGGCTAGTCGGTGTAGGTGGAAGTACTTCCTaGCTAGTCGGTGTAAACGTT +
Preference number: 4 (lower is better)
Translates to: CNFPKCARGGSTSWLVGVGGSTS*LVGVNV
Trigger: AACGTTTACACCGACTAGCCAGGAAGTACTTCCACC...TACACCGACTAGCCAGGAAGTACTTCCACCTCGGGCACATTTTGGGAAGTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp CCAAAATGTGCCCGAGGTGGAAGTACTTCCTGGCTAGTCGGTGTAAACGTTGCAAAAATGTGCCCGAGGTaGAAGTACTTCCTGGCTAGT +
Preference number: 4 (lower is better)
Translates to: PKCARGGSTSWLVGVNVAKMCPR*KYFLAS
Trigger: ACTAGCCAGGAAGTACTTCCACCTCGGGCACATTTT...TGCAACGTTTACACCGACTAGCCAGGAAGTACTTCCACCTCGGGCACATTTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp TGGAGGACCTGCTGTGGCTTGGTCCTGGGTATCGAAAGAGTCTGGATTTTTAGGCAAACACCTAAGCTTTaGTGTCATCAGCTGGAGTGC +
Preference number: 4 (lower is better)
Translates to: WRTCCGLVLGIERVWIFRQTPKL*CHQLEC
Trigger: GCACTCCAGCTGATGACACCAAAGCTTAGGTGTTTG...CCTAAAAATCCAGACTCTTTCGATACCCAGGACCAAGCCACAGCAGGTCCTCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CCA 90 bp GAATTTGCCTCCAAGTCCATGTCCTTGTGGCTAATCCCTAGGCCAGTAGTTCTCTCTCTCCACTGCACATaGGAATCTCTACCCTACCCA +
Preference number: 4 (lower is better)
Translates to: EFASKSMSLWLIPRPVVLSLHCT*ESLPYP
Trigger: TGGGTAGGGTAGAGATTCCCATGTGCAGTGGAGAGA...GAGAACTACTGGCCTAGGGATTAGCCACAAGGACATGGACTTGGAGGCAAATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CCA 90 bp CAAACAAGTCAGTCTAACGCTCATGACTGGAAACCACTGGTCCATCAGTGGGGACAGGTGTTGCCTACGTaGAATAGCAGCTCACTCACA +
Preference number: 4 (lower is better)
Translates to: QTSQSNAHDWKPLVHQWGQVLPT*NSSSLT
Trigger: TGTGAGTGAGCTGCTATTCCACGTAGGCAACACCTG...TCCCCACTGATGGACCAGTGGTTTCCAGTCATGAGCGTTAGACTGACTTGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CCA 90 bp CCGCCCTTGAGAACCAGTGCCTTTCCTGCTAAGCAATCCATAGTCCCCTTATGTAAGTCCATGTCCTTGTaGCTAATCCCTAGGCCAGTA +
Preference number: 4 (lower is better)
Translates to: PPLRTSAFPAKQSIVPLCKSMSL*LIPRPV
Trigger: TACTGGCCTAGGGATTAGCCACAAGGACATGGACTT...ACATAAGGGGACTATGGATTGCTTAGCAGGAAAGGCACTGGTTCTCAAGGGCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CCA 90 bp AGGGCTTTGCGGCTTCTACCAGACAGAACTGTGCCTCCCTGGACAGATGAAGTGCTTGGAGAACCTTCATaGAAACTCTGTTCAGGTTCT +
Preference number: 4 (lower is better)
Translates to: RALRLLPDRTVPPWTDEVLGEPS*KLCSGS
Trigger: AGAACCTGAACAGAGTTTCCATGAAGGTTCTCCAAG...CACTTCATCTGTCCAGGGAGGCACAGTTCTGTCTGGTAGAAGCCGCAAAGCCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR CAA 72 bp CCCATTAGAATCATGAAAGAGCCCCCGAGATTTGGGTaGAATTGGTCTGCAGAGACTCCAGGCCCCTTCTTT +
Preference number: 4 (lower is better)
Translates to: PIRIMKEPPRFG*NWSAETPGPFF
Trigger: AAAGAAGGGGCCTGGAGTCTCTGCAGACCAATTCAACCCAAATCTCGGGGGCTCTTTCATGATTCTAATGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR TCA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAAGGGCAGGGTTGTTGCTaGACCGCACGGCGCCATGCA +
Preference number: 4 (lower is better)
Translates to: EIVERKCSFSGRLKSDSEGQGCC*TARRHA
Trigger: TGCATGGCGCCGTGCGGTTCAGCAACAACCCTGCCC...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR TCA 90 bp CCCTTTCCATTAACACTGCCCCAACAGAACCTGCCTCAGACCAAGCTAAATGTGTTTTCAGGCCAAGCCTaGATCAGCAAAAACCCTGTG +
Preference number: 4 (lower is better)
Translates to: PFPLTLPQQNLPQTKLNVFSGQA*ISKNPV
Trigger: CACAGGGTTTTTGCTGATTCAGGCTTGGCCTGAAAA...CACATTTAGCTTGGTCTGAGGCAGGTTCTGTTGGGGCAGTGTTAATGGAAAGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR TCA 90 bp CCTGCTGTGGCTTGGTCCTGGGTATCGAAAGAGTCTGGATTTTTAGGGCTCATAACTGCAAGAGAAAACTaGCCATGTTGCTTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: PAVAWSWVSKESGFLGLITAREN*PCCLVL
Trigger: CAGGACCAAGCAACATGGTCAGTTTTCTCTTGCAGT...TATGAGCCCTAAAAATCCAGACTCTTTCGATACCCAGGACCAAGCCACAGCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR TCA 90 bp TTCTGCTCAAAGGGACAATATTCTTGCTGGATGCGTTTCTGTAAATGCTTCACAGTGATGTTCATGGCCTaGGGCAGGCACTCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: FCSKGQYSCWMRFCKCFTVMFMA*GRHSGW
Trigger: CCACCCAGAGTGCCTGCCTCAGGCCATGAACATCAC...TGTGAAGCATTTACAGAAACGCATCCAGCAAGAATATTGTCCCTTTGAGCAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR TCA 90 bp TTATTATTTGATGTGTCATCCTCTCTTGCTGATTTCATGACAGCAAGACAGGGGCCCGTCCTGTGCAGGTaGTGTTCATGGCCTGAGGCA +
Preference number: 4 (lower is better)
Translates to: LLFDVSSSLADFMTARQGPVLCR*CSWPEA
Trigger: TGCCTCAGGCCATGAACATCACCTGCACAGGACGGG...CCCCTGTCTTGCTGTCATGAAATCAGCAAGAGAGGATGACACATCAAATAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR TCA 90 bp TTCTGCTCAAAGGGACAATATTCTTGCTGGATGCGTTTCTGTAAATGCTTCACACCCGTCCTGTGCAGGTaGTGTTCATGGCCTGAGGCA +
Preference number: 4 (lower is better)
Translates to: FCSKGQYSCWMRFCKCFTPVLCR*CSWPEA
Trigger: TGCCTCAGGCCATGAACATCACCTGCACAGGACGGG...TGTGAAGCATTTACAGAAACGCATCCAGCAAGAATATTGTCCCTTTGAGCAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR TCA 90 bp ATTGGAATGACCTCAGGAGCTTTAAAAACTACGAATGCTTGGGTTTCAGCCCCATCTGCACACACCAGTTaGGCAGGTACTGGGAGCCAA +
Preference number: 4 (lower is better)
Translates to: IGMTSGALKTTNAWVSAPSAHTS*AGTGSQ
Trigger: TTGGCTCCCAGTACCTGCTCAACTGGTGTGTGCAGA...TGGGGCTGAAACCCAAGCATTCGTAGTTTTTAAAGCTCCTGAGGTCATTCCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR TCA 90 bp CAAGATAGAGCCAGCAGAGAGAACAGGGATCAAATCTGTCACAAACACACACATGTACATATGGGTGGCTaGGGGAGGCGTTCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: QDRASRENRDQICHKHTHVHMGG*GRRSPF
Trigger: GAAAGGAGAACGCCTCCCTCAGCCACCCATATGTAC...ATGTGTGTGTTTGTGACAGATTTGATCCCTGTTCTCTCTGCTGGCTCTATCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR TCA 90 bp TTTGATGTGTCATCCTCTCTTGCTGATTTCATGACAGCAAGACAGGGGCAGCATAGAAGCTGTCTTCCTTaGTGGGACAGCTTTGCAGCC +
Preference number: 4 (lower is better)
Translates to: FDVSSSLADFMTARQGQHRSCLP*WDSFAA
Trigger: GGCTGCAAAGCTGTCCCATCAAGGAAGACAGCTTCT...ATGCTGCCCCTGTCTTGCTGTCATGAAATCAGCAAGAGAGGATGACACATCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR TCA 90 bp AGTCACAACATCAAGAACTTTCAGCAAACACCTAAGCTTTGGTGTCATCAGCTGTGGGCTGGACAGTGTTaGGATACTCGGGGTTGCCCA +
Preference number: 4 (lower is better)
Translates to: SHNIKNFQQTPKLWCHQLWAGQC*DTRGCP
Trigger: TGGGCAACCCCGAGTATCTCAACACTGTCCAGCCCA...CAGCTGATGACACCAAAGCTTAGGTGTTTGCTGAAAGTTCTTGATGTTGTGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR TCA 90 bp ATAACTTACTTAGAGAATGCAGAGGGTCCCAGGGCGTTTTCAAAGCTCAGGTGGATGCCCCAAAGGACCTaGTGCATTTCATCTGAGCCT +
Preference number: 4 (lower is better)
Translates to: ITYLENAEGPRAFSKLRWMPQRT*CISSEP
Trigger: AGGCTCAGATGAAATGCATCAGGTCCTTTGGGGCAT...CCACCTGAGCTTTGAAAACGCCCTGGGACCCTCTGCATTCTCTAAGTAAGTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR TCA 90 bp TGGAGGACCTGCTGTGGCTTGGTCCTGGGTATCGAAAGAGTCTGGATTTTTAGGGGGCTCCTAACTAGCTaGATCTTCCAATCTTCCAAT +
Preference number: 4 (lower is better)
Translates to: WRTCCGLVLGIERVWIFRGLLTS*IFQSSN
Trigger: ATTGGAAGATTGGAAGATTCAGCTAGTTAGGAGCCC...CCTAAAAATCCAGACTCTTTCGATACCCAGGACCAAGCCACAGCAGGTCCTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR TCA 90 bp TGCAACTTCCCAAAATGTGCCCGAGGTGGAAGTACTTCCTGGCTAGTCGGTGTATGTAGGGGCTCTGACTaGTCTGGGAGTCAAAAATTA +
Preference number: 4 (lower is better)
Translates to: CNFPKCARGGSTSWLVGVCRGSD*SGSQKL
Trigger: TAATTTTTGACTCCCAGATCAGTCAGAGCCCCTACA...TACACCGACTAGCCAGGAAGTACTTCCACCTCGGGCACATTTTGGGAAGTTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR TCA 90 bp GTAAATGCTTCACAGTTTGAAGACAAAGGAATGCAACTTCCCAAAATGTGCCCGCTCACAGTGCCTGGCTaGTGGGTCCTGTCTGGCATT +
Preference number: 4 (lower is better)
Translates to: VNASQFEDKGMQLPKMCPLTVPG*WVLSGI
Trigger: AATGCCAGACAGGACCCATCAGCCAGGCACTGTGAG...CGGGCACATTTTGGGAAGTTGCATTCCTTTGTCTTCAAACTGTGAAGCATTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR TCA 90 bp GAATTTGCCTCCAAGTCCATGTCCTTGTGGCTAATCCCTAGGCCAGTAGTTCTCTCTCAGGCTTATCAGTaGCTGCAGATTGTTCTCTCC +
Preference number: 4 (lower is better)
Translates to: EFASKSMSLWLIPRPVVLSQAYQ*LQIVLS
Trigger: GGAGAGAACAATCTGCAGTCACTGATAAGCCTGAGA...GAGAACTACTGGCCTAGGGATTAGCCACAAGGACATGGACTTGGAGGCAAATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR GCA 90 bp CCTGCTGTGGCTTGGTCCTGGGTATCGAAAGAGTCTGGATTTTTAGGGCTCATATCAAAAGTGCCCAACTaGGTGAGCTTGTTACTCGTG +
Preference number: 4 (lower is better)
Translates to: PAVAWSWVSKESGFLGLISKVPN*VSLLLV
Trigger: CACGAGTAACAAGCTCACGCAGTTGGGCACTTTTGA...TATGAGCCCTAAAAATCCAGACTCTTTCGATACCCAGGACCAAGCCACAGCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp AGTCACAACATCAAGAACTTTCAGCAAACACCTAAGCTTTGGTGTCATCAGCTGGGATGCTCTCCACGTTaGACAGGGCAGGGTTGTTGC +
Preference number: 4 (lower is better)
Translates to: SHNIKNFQQTPKLWCHQLGCSPR*TGQGCC
Trigger: GCAACAACCCTGCCCTGTGCAACGTGGAGAGCATCC...CAGCTGATGACACCAAAGCTTAGGTGTTTGCTGAAAGTTCTTGATGTTGTGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR GCA 90 bp TTCTGCTCAAAGGGACAATATTCTTGCTGGATGCGTTTCTGTAAATGCTTCACATGTCCCGCCACTGGATaGTCTCCACGTTGCACAGGG +
Preference number: 4 (lower is better)
Translates to: FCSKGQYSCWMRFCKCFTCPATG*SPRCTG
Trigger: CCCTGTGCAACGTGGAGAGCATCCAGTGGCGGGACA...TGTGAAGCATTTACAGAAACGCATCCAGCAAGAATATTGTCCCTTTGAGCAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR GCA 90 bp GCTAGAAATTTTGCAGATTCATTCTTACAACAGAGGTACAGCAAACAACCAGACGGGGCCTGTGCAGCCTaGAGCACACTGGTTGTGGCA +
Preference number: 4 (lower is better)
Translates to: ARNFADSFLQQRYSKQPDGACAA*STLVVA
Trigger: TGCCACAACCAGTGTGCTGCAGGCTGCACAGGCCCC...GTCTGGTTGTTTGCTGTACCTCTGTTGTAAGAATGAATCTGCAAAATTTCTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR GCA 90 bp TGCAGTGGAAGCCTTGAAGCAGAACCACTGGAATCAAGCATCCTCTGGAAGACTGTTCAGGCTGACGACTaGAAGAGAAAACTGACCATG +
Preference number: 4 (lower is better)
Translates to: CSGSLEAEPLESSILWKTVQADD*KRKLTM
Trigger: CATGGTCAGTTTTCTCTTGCAGTCGTCAGCCTGAAC...AGTCTTCCAGAGGATGCTTGATTCCAGTGGTTCTGCTTCAAGGCTTCCACTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp ATTGGAATGACCTCAGGAGCTTTAAAAACTACGAATGCTTGGGTTTCAGCCCCACACCCTCCAGAAGGTTaGACTTGTCCACGCATTCCC +
Preference number: 4 (lower is better)
Translates to: IGMTSGALKTTNAWVSAPHPPEG*TCPRIP
Trigger: GGGAATGCGTGGACAAGTGCAACCTTCTGGAGGGTG...TGGGGCTGAAACCCAAGCATTCGTAGTTTTTAAAGCTCCTGAGGTCATTCCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR GCA 90 bp ACACAGATGTACACACATCATGAACACTCACACACACAGATGTGTATGTCCGTGCACCCTCCAGAAGGTTaGACTTGTCCACGCATTCCC +
Preference number: 4 (lower is better)
Translates to: TQMYTHHEHSHTQMCMSVHPPEG*TCPRIP
Trigger: GGGAATGCGTGGACAAGTGCAACCTTCTGGAGGGTG...CACGGACATACACATCTGTGTGTGTGAGTGTTCATGATGTGTGTACATCTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR GCA 90 bp TTATTATTTGATGTGTCATCCTCTCTTGCTGATTTCATGACAGCAAGACAGGGGCCGAAGGGCATGAGCTaGGTGATGAGCTGCACGGTG +
Preference number: 4 (lower is better)
Translates to: LLFDVSSSLADFMTARQGPKGMS*VMSCTV
Trigger: CACCGTGCAGCTCATCACGCAGCTCATGCCCTTCGG...CCCCTGTCTTGCTGTCATGAAATCAGCAAGAGAGGATGACACATCAAATAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp AGTCTAAGGAAGAATTCCATCCCCTCCGTTTCTTCTTTGCCCAGGAAGGGACAGGTGATCTTGACATGCTaGGGTGTTTTCACCAGTACG +
Preference number: 4 (lower is better)
Translates to: SLRKNSIPSVSSLPRKGQVILTC*GVFTST
Trigger: CGTACTGGTGAAAACACCGCAGCATGTCAAGATCAC...CTGTCCCTTCCTGGGCAAAGAAGAAACGGAGGGGATGGAATTCTTCCTTAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp ACACAGATGTACACACATCATGAACACTCACACACACAGATGTGTATGTCCGTGCTGCTGAAGAAGCCCTaGTGTGGGATGAGGTACTCG +
Preference number: 4 (lower is better)
Translates to: TQMYTHHEHSHTQMCMSVLLKKP*CGMRYS
Trigger: CGAGTACCTCATCCCACAGCAGGGCTTCTTCAGCAG...CACGGACATACACATCTGTGTGTGTGAGTGTTCATGATGTGTGTACATCTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR GCA 90 bp TTTGATGTGTCATCCTCTCTTGCTGATTTCATGACAGCAAGACAGGGGCAGCATCCACGGTGGAATTGTTaGTGGTTGCACTCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: FDVSSSLADFMTARQGQHPRWNC*WLHSES
Trigger: GCTCTCTGAGTGCAACCAGCAACAATTCCACCGTGG...ATGCTGCCCCTGTCTTGCTGTCATGAAATCAGCAAGAGAGGATGACACATCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp GTCAAGATAGAGCCAGCAGAGAGAACAGGGATCAAATCTGTCACAAACACACACCCACGGTGGAATTGTTaGTGGTTGCACTCAGAGAGC +
Preference number: 4 (lower is better)
Translates to: VKIEPAERTGIKSVTNTHPRWNC*WLHSES
Trigger: GCTCTCTGAGTGCAACCAGCAACAATTCCACCGTGG...GTGTGTGTTTGTGACAGATTTGATCCCTGTTCTCTCTGCTGGCTCTATCTTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR GCA 90 bp AGTCTAAGGAAGAATTCCATCCCCTCCGTTTCTTCTTTGCCCAGGAAGGGACAGAGTCGGTGTAAACGTTaGAAAACCAGTCTGTGGGTC +
Preference number: 4 (lower is better)
Translates to: SLRKNSIPSVSSLPRKGQSRCKR*KTSLWV
Trigger: GACCCACAGACTGGTTTTGCAACGTTTACACCGACT...CTGTCCCTTCCTGGGCAAAGAAGAAACGGAGGGGATGGAATTCTTCCTTAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp TGGAGGACCTGCTGTGGCTTGGTCCTGGGTATCGAAAGAGTCTGGATTTTTAGGAGGCTTATCAGTGACTaGAGATTGTTCTCTCCACTG +
Preference number: 4 (lower is better)
Translates to: WRTCCGLVLGIERVWIFRRLISD*RLFSPL
Trigger: CAGTGGAGAGAACAATCTGCAGTCACTGATAAGCCT...CCTAAAAATCCAGACTCTTTCGATACCCAGGACCAAGCCACAGCAGGTCCTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR GCA 90 bp CCCTTTCCATTAACACTGCCCCAACAGAACCTGCCTCAGACCAAGCTAAATGTGAACTTACTTAGAGAATaGAGAGGGTCCCAGGGCGTT +
Preference number: 4 (lower is better)
Translates to: PFPLTLPQQNLPQTKLNVNLLRE*RGSQGV
Trigger: AACGCCCTGGGACCCTCTGCATTCTCTAAGTAAGTT...CACATTTAGCTTGGTCTGAGGCAGGTTCTGTTGGGGCAGTGTTAATGGAAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CCA 90 bp ATAACTTACTTAGAGAATGCAGAGGGTCCCAGGGCGTTTTCAAAGCTCAGGTGGCCCATTGGGACAGCTTaGATCACACTTTTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: ITYLENAEGPRAFSKLRWPIGTA*ITLLAA
Trigger: AGCTGCCAAAAGTGTGATCCAAGCTGTCCCAATGGG...CCACCTGAGCTTTGAAAACGCCCTGGGACCCTCTGCATTCTCTAAGTAAGTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CCA 90 bp GAATTTGCCTCCAAGTCCATGTCCTTGTGGCTAATCCCTAGGCCAGTAGTTCTCACTTCTTCACGCAGGTaGCACCAAAGCTGTATTTGC +
Preference number: 4 (lower is better)
Translates to: EFASKSMSLWLIPRPVVLTSSRR*HQSCIC
Trigger: GCAAATACAGCTTTGGTGCCACCTGCGTGAAGAAGT...GAGAACTACTGGCCTAGGGATTAGCCACAAGGACATGGACTTGGAGGCAAATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CCA 90 bp TGCAGTGGAAGCCTTGAAGCAGAACCACTGGAATCAAGCATCCTCTGGAAGACTACTTCTTCACGCAGGTaGCACCAAAGCTGTATTTGC +
Preference number: 4 (lower is better)
Translates to: CSGSLEAEPLESSILWKTTSSRR*HQSCIC
Trigger: GCAAATACAGCTTTGGTGCCACCTGCGTGAAGAAGT...AGTCTTCCAGAGGATGCTTGATTCCAGTGGTTCTGCTTCAAGGCTTCCACTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp CCTGCTGTGGCTTGGTCCTGGGTATCGAAAGAGTCTGGATTTTTAGGGCTCATAAGGTTCTCAAAGGCATaGAGGTCCGTCCTGTTTTCA +
Preference number: 4 (lower is better)
Translates to: PAVAWSWVSKESGFLGLIRFSKA*RSVLFS
Trigger: TGAAAACAGGACGGACCTCCATGCCTTTGAGAACCT...TATGAGCCCTAAAAATCCAGACTCTTTCGATACCCAGGACCAAGCCACAGCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp GTCAAGATAGAGCCAGCAGAGAGAACAGGGATCAAATCTGTCACAAACACACACCTTAGGCCCATTCGTTaGACAGCCTTCAAGACCTGG +
Preference number: 4 (lower is better)
Translates to: VKIEPAERTGIKSVTNTHLRPIR*TAFKTW
Trigger: CCAGGTCTTGAAGGCTGTCCAACGAATGGGCCTAAG...GTGTGTGTTTGTGACAGATTTGATCCCTGTTCTCTCTGCTGGCTCTATCTTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CCA 90 bp GTAAATGCTTCACAGTTTGAAGACAAAGGAATGCAACTTCCCAAAATGTGCCCGCGCTTCCGAACGATGTaGCGCCTTCGCATGAAGAGG +
Preference number: 4 (lower is better)
Translates to: VNASQFEDKGMQLPKMCPRFRTM*RLRMKR
Trigger: CCTCTTCATGCGAAGGCGCCACATCGTTCGGAAGCG...CGGGCACATTTTGGGAAGTTGCATTCCTTTGTCTTCAAACTGTGAAGCATTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp CAAACAACCAGACACAACAAAGAGCTTGTGCAGGCTCGGTCATGTGTTTATCTGTCAAGAGAGCTTGGTTaGGAGCTTCTCCACTGGGTG +
Preference number: 4 (lower is better)
Translates to: QTTRHNKELVQARSCVYLSRELG*ELLHWV
Trigger: CACCCAGTGGAGAAGCTCCCAACCAAGCTCTCTTGA...CAGATAAACACATGACCGAGCCTGCACAAGCTCTTTGTTGTGTCTGGTTGTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CCA 90 bp TGGAGGACCTGCTGTGGCTTGGTCCTGGGTATCGAAAGAGTCTGGATTTTTAGGCAGTTGAGCAGGTACTaGGAGCCAATATTGTCTTTG +
Preference number: 4 (lower is better)
Translates to: WRTCCGLVLGIERVWIFRQLSRY*EPILSL
Trigger: CAAAGACAATATTGGCTCCCAGTACCTGCTCAACTG...CCTAAAAATCCAGACTCTTTCGATACCCAGGACCAAGCCACAGCAGGTCCTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp TGCAACTTCCCAAAATGTGCCCGAGGTGGAAGTACTTCCTGGCTAGTCGGTGTAAGGGATTCCGTCATATaGCTTGGATCCAAAGGTCAT +
Preference number: 4 (lower is better)
Translates to: CNFPKCARGGSTSWLVGVRDSVI*LGSKGH
Trigger: ATGACCTTTGGATCCAAGCCATATGACGGAATCCCT...TACACCGACTAGCCAGGAAGTACTTCCACCTCGGGCACATTTTGGGAAGTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp CAAGATAGAGCCAGCAGAGAGAACAGGGATCAAATCTGTCACAAACACACACATGATGGTACATATGGGTaGCTGAGGGAGGCGTTCTCC +
Preference number: 4 (lower is better)
Translates to: QDRASRENRDQICHKHTHDGTYG*LREAFS
Trigger: GGAGAACGCCTCCCTCAGCCACCCATATGTACCATC...ATGTGTGTGTTTGTGACAGATTTGATCCCTGTTCTCTCTGCTGGCTCTATCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CCA 90 bp TTATTATTTGATGTGTCATCCTCTCTTGCTGATTTCATGACAGCAAGACAGGGGTGCGGGCATGGCTGTTaGGATGGAGGACCTGCTGTG +
Preference number: 4 (lower is better)
Translates to: LLFDVSSSLADFMTARQGCGHGC*DGGPAV
Trigger: CACAGCAGGTCCTCCATCCCAACAGCCATGCCCGCA...CCCCTGTCTTGCTGTCATGAAATCAGCAAGAGAGGATGACACATCAAATAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp GTAAATGCTTCACAGTTTGAAGACAAAGGAATGCAACTTCCCAAAATGTGCCCGGAGCTAATGCGGGCATaGCTGTTGGGATGGAGGACC +
Preference number: 4 (lower is better)
Translates to: VNASQFEDKGMQLPKMCPELMRA*LLGWRT
Trigger: GGTCCTCCATCCCAACAGCCATGCCCGCATTAGCTC...CGGGCACATTTTGGGAAGTTGCATTCCTTTGTCTTCAAACTGTGAAGCATTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp CCTGCTGTGGCTTGGTCCTGGGTATCGAAAGAGTCTGGATTTTTAGGGCTCATAGGTGGAAGTACTTCCTaGCTAGTCGGTGTAAACGTT +
Preference number: 4 (lower is better)
Translates to: PAVAWSWVSKESGFLGLIGGSTS*LVGVNV
Trigger: AACGTTTACACCGACTAGCCAGGAAGTACTTCCACC...TATGAGCCCTAAAAATCCAGACTCTTTCGATACCCAGGACCAAGCCACAGCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp TGCAGTGGAAGCCTTGAAGCAGAACCACTGGAATCAAGCATCCTCTGGAAGACTAAAATGTGCCCGAGGTaGAAGTACTTCCTGGCTAGT +
Preference number: 4 (lower is better)
Translates to: CSGSLEAEPLESSILWKTKMCPR*KYFLAS
Trigger: ACTAGCCAGGAAGTACTTCCACCTCGGGCACATTTT...AGTCTTCCAGAGGATGCTTGATTCCAGTGGTTCTGCTTCAAGGCTTCCACTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp TGCAGTGGAAGCCTTGAAGCAGAACCACTGGAATCAAGCATCCTCTGGAAGACTGAATCAAGCATCCTCTaGAAGACTTGTGGCTTGTGC +
Preference number: 4 (lower is better)
Translates to: CSGSLEAEPLESSILWKTESSIL*KTCGLC
Trigger: GCACAAGCCACAAGTCTTCCAGAGGATGCTTGATTC...AGTCTTCCAGAGGATGCTTGATTCCAGTGGTTCTGCTTCAAGGCTTCCACTGCA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp CAGCTGTGGGCTATTGGTCCAAATGCTGATGAATCCAATGTGGGCTGGAATCCGTTGAAGCAGAACCACTaGAATCAAGCATCCTCTGGA +
Preference number: 4 (lower is better)
Translates to: QLWAIGPNADESNVGWNPLKQNH*NQASSG
Trigger: TCCAGAGGATGCTTGATTCCAGTGGTTCTGCTTCAA...CGGATTCCAGCCCACATTGGATTCATCAGCATTTGGACCAATAGCCCACAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp TGCAACTTCCCAAAATGTGCCCGAGGTGGAAGTACTTCCTGGCTAGTCGGTGTATTTGGTGTCATCAGCTaGAGTGCAATAGGATGCATC +
Preference number: 4 (lower is better)
Translates to: CNFPKCARGGSTSWLVGVFGVIS*SAIGCI
Trigger: GATGCATCCTATTGCACTCCAGCTGATGACACCAAA...TACACCGACTAGCCAGGAAGTACTTCCACCTCGGGCACATTTTGGGAAGTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CCA 90 bp GAATTTGCCTCCAAGTCCATGTCCTTGTGGCTAATCCCTAGGCCAGTAGTTCTCAAGCCACAGTCTTTCTaGTTGGGACCAGAAGATTCC +
Preference number: 4 (lower is better)
Translates to: EFASKSMSLWLIPRPVVLKPQSF*LGPEDS
Trigger: GGAATCTTCTGGTCCCAACCAGAAAGACTGTGGCTT...GAGAACTACTGGCCTAGGGATTAGCCACAAGGACATGGACTTGGAGGCAAATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CCA 90 bp ACACAGATGTACACACATCATGAACACTCACACACACAGATGTGTATGTCCGTGCCACTCACCAGGCACTaGGAGGAAGGTGTCGTCTAT +
Preference number: 4 (lower is better)
Translates to: TQMYTHHEHSHTQMCMSVPLTRH*EEGVVY
Trigger: ATAGACGACACCTTCCTCCCAGTGCCTGGTGAGTGG...CACGGACATACACATCTGTGTGTGTGAGTGTTCATGATGTGTGTACATCTGTGT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CCA 90 bp AGAGAGAACAGGGATCAAATCTGTCACAAACACACACATACACACACACACATAAGGGAGCACCTGGCTTaGACACTGGAGACTGGCTGC +
Preference number: 4 (lower is better)
Translates to: RENRDQICHKHTHTHTHIREHLA*TLETGC
Trigger: GCAGCCAGTCTCCAGTGTCCAAGCCAGGTGCTCCCT...TATGTGTGTGTGTGTATGTGTGTGTTTGTGACAGATTTGATCCCTGTTCTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
3UTR CAA 72 bp TCTCACAGTGCCTGGCTGATGGGTCCTGTCTGGCATTaGTCACGTTGTTTTAAGGTTAGCATCTATGAGTCC +
Preference number: 4 (lower is better)
Translates to: SHSAWLMGPVWH*SRCFKVSIYES
Trigger: GGACTCATAGATGCTAACCTTAAAACAACGTGACAAATGCCAGACAGGACCCATCAGCCAGGCACTGTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR CAA 72 bp CCAGGCCCTTCCTTTAGGCCAGAGGTTCTAGAAACTTaGATGAATGTTGCAATAACCAGGGGGTGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: PGPSFRPEVLET*MNVAITRGCSE
Trigger: TTCAGAGCACCCCCTGGTTATTGCAACATTCATCAAAGTTTCTAGAACCTCTGGCCTAAAGGAAGGGCCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR CAA 72 bp CAGGTTCTTGACTCTCAGCGACAGATGTGGAGGTCTTaGTGTCTTAGCTCTCTAGGCCTGAGAATCACATAC +
Preference number: 4 (lower is better)
Translates to: QVLDSQRQMWRS*CLSSLGLRITY
Trigger: GTATGTGATTCTCAGGCCTAGAGAGCTAAGACACAAAGACCTCCACATCTGTCGCTGAGAGTCAAGAACCTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR TCA 90 bp ACACAGATGTACACACATCATGAACACTCACACACACAGATGTGTATGTCCGTGAAGTGCCCAACTGCGTaGGCTTGTTACTCGTGCCTT +
Preference number: 4 (lower is better)
Translates to: TQMYTHHEHSHTQMCMSVKCPTA*ACYSCL
Trigger: AAGGCACGAGTAACAAGCTCACGCAGTTGGGCACTT...CACGGACATACACATCTGTGTGTGTGAGTGTTCATGATGTGTGTACATCTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR TCA 90 bp TTTGATGTGTCATCCTCTCTTGCTGATTTCATGACAGCAAGACAGGGGCAGCATACTGCTGGGCACAGATaGTTTTGGTCAGTTTCTGGC +
Preference number: 4 (lower is better)
Translates to: FDVSSSLADFMTARQGQHTAGHR*FWSVSG
Trigger: GCCAGAAACTGACCAAAATCATCTGTGCCCAGCAGT...ATGCTGCCCCTGTCTTGCTGTCATGAAATCAGCAAGAGAGGATGACACATCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR TCA 90 bp GCAAACAACCAGACACAACAAAGAGCTTGTGCAGGCTCGGTCATGTGTTTATCTACTGCTGGGCACAGATaGTTTTGGTCAGTTTCTGGC +
Preference number: 4 (lower is better)
Translates to: ANNQTQQRACAGSVMCLSTAGHR*FWSVSG
Trigger: GCCAGAAACTGACCAAAATCATCTGTGCCCAGCAGT...AGATAAACACATGACCGAGCCTGCACAAGCTCTTTGTTGTGTCTGGTTGTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR TCA 90 bp TTTGATGTGTCATCCTCTCTTGCTGATTTCATGACAGCAAGACAGGGGCAGCATTGGTCCTGCCGCGTATaGTTTCTAGGTTCTCAAAGG +
Preference number: 4 (lower is better)
Translates to: FDVSSSLADFMTARQGQHWSCRV*FLGSQR
Trigger: CCTTTGAGAACCTAGAAATCATACGCGGCAGGACCA...ATGCTGCCCCTGTCTTGCTGTCATGAAATCAGCAAGAGAGGATGACACATCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR TCA 90 bp TGGAGGACCTGCTGTGGCTTGGTCCTGGGTATCGAAAGAGTCTGGATTTTTAGGATAATTTTGGTTTTCTaGCCGGAGGTCCCAAACAGT +
Preference number: 4 (lower is better)
Translates to: WRTCCGLVLGIERVWIFRIILVF*PEVPNS
Trigger: ACTGTTTGGGACCTCCGGTCAGAAAACCAAAATTAT...CCTAAAAATCCAGACTCTTTCGATACCCAGGACCAAGCCACAGCAGGTCCTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR TCA 90 bp CACAACAAAGAGCTTGTGCAGGCTCGGTCATGTGTTTATCTGCTCCTTACGCCCATAATTTTGGTTTTCTaGCCGGAGGTCCCAAACAGT +
Preference number: 4 (lower is better)
Translates to: HNKELVQARSCVYLLLTPIILVF*PEVPNS
Trigger: ACTGTTTGGGACCTCCGGTCAGAAAACCAAAATTAT...GGGCGTAAGGAGCAGATAAACACATGACCGAGCCTGCACAAGCTCTTTGTTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR TCA 90 bp ACACAGATGTACACACATCATGAACACTCACACACACAGATGTGTATGTCCGTGAGAAGCTGTCTTCCTTaGTGGGACAGCTTTGCAGCC +
Preference number: 4 (lower is better)
Translates to: TQMYTHHEHSHTQMCMSVRSCLP*WDSFAA
Trigger: GGCTGCAAAGCTGTCCCATCAAGGAAGACAGCTTCT...CACGGACATACACATCTGTGTGTGTGAGTGTTCATGATGTGTGTACATCTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR TCA 90 bp GCTAGAAATTTTGCAGATTCATTCTTACAACAGAGGTACAGCAAACAACCAGACGGCGCCTGTGGGGTCTaGGCTGTATCGCTGCAAGAA +
Preference number: 4 (lower is better)
Translates to: ARNFADSFLQQRYSKQPDGACGV*AVSLQE
Trigger: TTCTTGCAGCGATACAGCTCAGACCCCACAGGCGCC...GTCTGGTTGTTTGCTGTACCTCTGTTGTAAGAATGAATCTGCAAAATTTCTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR TCA 90 bp CCAAAATGTGCCCGAGGTGGAAGTACTTCCTGGCTAGTCGGTGTAAACGTTGCAACAGGGGCAGCATACTaGGTTTCAAAACAATGGAAT +
Preference number: 4 (lower is better)
Translates to: PKCARGGSTSWLVGVNVATGAAY*VSKQWN
Trigger: ATTCCATTGTTTTGAAACTCAGTATGCTGCCCCTGT...TGCAACGTTTACACCGACTAGCCAGGAAGTACTTCCACCTCGGGCACATTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR TCA 90 bp TTCTGCTCAAAGGGACAATATTCTTGCTGGATGCGTTTCTGTAAATGCTTCACAGGGTTTGGGGGCAGCTaGCCTGGAGGGAACATATAC +
Preference number: 4 (lower is better)
Translates to: FCSKGQYSCWMRFCKCFTGFGGS*PGGNIY
Trigger: GTATATGTTCCCTCCAGGTCAGCTGCCCCCAAACCC...TGTGAAGCATTTACAGAAACGCATCCAGCAAGAATATTGTCCCTTTGAGCAGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR TCA 90 bp TGGAGGACCTGCTGTGGCTTGGTCCTGGGTATCGAAAGAGTCTGGATTTTTAGGAAGTGCTTGAATAGATaGCTCAAGGCAGAGACACTT +
Preference number: 4 (lower is better)
Translates to: WRTCCGLVLGIERVWIFRKCLNR*LKAETL
Trigger: AAGTGTCTCTGCCTTGAGTCATCTATTCAAGCACTT...CCTAAAAATCCAGACTCTTTCGATACCCAGGACCAAGCCACAGCAGGTCCTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR TCA 90 bp CCCTTTCCATTAACACTGCCCCAACAGAACCTGCCTCAGACCAAGCTAAATGTGAGAGCTGTAAGTGCTTaGATAGATGACTCAAGGCAG +
Preference number: 4 (lower is better)
Translates to: PFPLTLPQQNLPQTKLNVRAVSA*IDDSRQ
Trigger: CTGCCTTGAGTCATCTATTCAAGCACTTACAGCTCT...CACATTTAGCTTGGTCTGAGGCAGGTTCTGTTGGGGCAGTGTTAATGGAAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR TCA 90 bp CACACTGCCTGCTACATAGTTTTTATCCCAGGTATAATTTGTGAGGAATGTATAAACCAGGGGGTGCTCTaGAAAGGCCCTACGGCTGGG +
Preference number: 4 (lower is better)
Translates to: HTACYIVFIPGIICEECINQGVL*KGPTAG
Trigger: CCCAGCCGTAGGGCCTTTTCAGAGCACCCCCTGGTT...TATACATTCCTCACAAATTATACCTGGGATAAAAACTATGTAGCAGGCAGTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR TCA 90 bp CCCTTTCCATTAACACTGCCCCAACAGAACCTGCCTCAGACCAAGCTAAATGTGCCAGGCAAGGAAATGTaGGCAGATCATTATGTTGCA +
Preference number: 4 (lower is better)
Translates to: PFPLTLPQQNLPQTKLNVPGKEM*ADHYVA
Trigger: TGCAACATAATGATCTGCTCACATTTCCTTGCCTGG...CACATTTAGCTTGGTCTGAGGCAGGTTCTGTTGGGGCAGTGTTAATGGAAAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR TCA 90 bp CCTCAAATTAGGAGATACGTTTTTGCGAGAACAAAAGCGGTGCTATCCTTAGGTGGCAGGTGTGGCTGGTaGAAGAGGCAAGGATTTCTG +
Preference number: 4 (lower is better)
Translates to: PQIRRYVFARTKAVLSLGGRCGW*KRQGFL
Trigger: CAGAAATCCTTGCCTCTTTCACCAGCCACACCTGCC...ACCTAAGGATAGCACCGCTTTTGTTCTCGCAAAAACGTATCTCCTAATTTGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR GCA 90 bp CTACCTGAATTCCACACTACTCATAATGCTACTGTCATTCGCACCTGTAAAATGGCAGTTCTCCTCTCCTaGACCCCAGCAGCTCCCATT +
Preference number: 4 (lower is better)
Translates to: LPEFHTTHNATVIRTCKMAVLLS*TPAAPI
Trigger: AATGGGAGCTGCTGGGGTGCAGGAGAGGAGAACTGC...CATTTTACAGGTGCGAATGACAGTAGCATTATGAGTAGTGTGGAATTCAGGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp TTATTATTTGATGTGTCATCCTCTCTTGCTGATTTCATGACAGCAAGACAGGGGCAGCGCCCGGAGCACTaGTGGGCACAGATGATTTTG +
Preference number: 4 (lower is better)
Translates to: LLFDVSSSLADFMTARQGQRPEH*WAQMIL
Trigger: CAAAATCATCTGTGCCCAGCAGTGCTCCGGGCGCTG...CCCCTGTCTTGCTGTCATGAAATCAGCAAGAGAGGATGACACATCAAATAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAAGGGGCCTGTGCAGCCTaGAGCACACTGGTTGTGGCA +
Preference number: 4 (lower is better)
Translates to: EIVERKCSFSGRLKSDSEGACAA*STLVVA
Trigger: TGCCACAACCAGTGTGCTGCAGGCTGCACAGGCCCC...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR GCA 90 bp AGAGAGAACAGGGATCAAATCTGTCACAAACACACACATACACACACACACATACTTCGTCTCGGAATTTaGGGCAGACCAGGCAGTCGC +
Preference number: 4 (lower is better)
Translates to: RENRDQICHKHTHTHTHILRLGI*GRPGSR
Trigger: GCGACTGCCTGGTCTGCCGCAAATTCCGAGACGAAG...TATGTGTGTGTGTGTATGTGTGTGTTTGTGACAGATTTGATCCCTGTTCTCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR GCA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAAGGGGGCAGGTGTCCTTaGACGTGGCTTCGTCTCGGA +
Preference number: 4 (lower is better)
Translates to: EIVERKCSFSGRLKSDSEGGRCP*TWLRLG
Trigger: TCCGAGACGAAGCCACGTGCAAGGACACCTGCCCCC...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR GCA 90 bp AAGATAGAGCCAGCAGAGAGAACAGGGATCAAATCTGTCACAAACACACACATACGCACTTCTTACACTTaGGGACGCCGTCTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: KIEPAERTGIKSVTNTHIRTSYT*GRRLPP
Trigger: TGGAGGAAGACGGCGTCCGCAAGTGTAAGAAGTGCG...TATGTGTGTGTTTGTGACAGATTTGATCCCTGTTCTCTCTGCTGGCTCTATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR GCA 90 bp CCTCAAATTAGGAGATACGTTTTTGCGAGAACAAAAGCGGTGCTATCCTTAGGTCCTGGCCTGTGGCCTTaGAGCTGTTTTCACCTCTGT +
Preference number: 4 (lower is better)
Translates to: PQIRRYVFARTKAVLSLGPGLWP*SCFHLC
Trigger: ACAGAGGTGAAAACAGCTGCAAGGCCACAGGCCAGG...ACCTAAGGATAGCACCGCTTTTGTTCTCGCAAAAACGTATCTCCTAATTTGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp AGTCTAAGGAAGAATTCCATCCCCTCCGTTTCTTCTTTGCCCAGGAAGGGACAGTCTGTGATCTTGACATaGTGCGGTGTTTTCACCAGT +
Preference number: 4 (lower is better)
Translates to: SLRKNSIPSVSSLPRKGQSVILT*CGVFTS
Trigger: ACTGGTGAAAACACCGCAGCATGTCAAGATCACAGA...CTGTCCCTTCCTGGGCAAAGAAGAAACGGAGGGGATGGAATTCTTCCTTAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp AAGATAGAGCCAGCAGAGAGAACAGGGATCAAATCTGTCACAAACACACACATAGGAAGGTGTCGTCTATaGTGTCCTCAGTCAAGGCGC +
Preference number: 4 (lower is better)
Translates to: KIEPAERTGIKSVTNTHIGRCRL*CPQSRR
Trigger: GCGCCTTGACTGAGGACAGCATAGACGACACCTTCC...TATGTGTGTGTTTGTGACAGATTTGATCCCTGTTCTCTCTGCTGGCTCTATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR GCA 90 bp GTAAATGCTTCACAGTTTGAAGACAAAGGAATGCAACTTCCCAAAATGTGCCCGGTGGCTTGTGCTCCTTaGTCACAGTTGGGCCTGGAT +
Preference number: 4 (lower is better)
Translates to: VNASQFEDKGMQLPKMCPVACAP*SQLGLD
Trigger: ATCCAGGCCCAACTGTGAGCAAGGAGCACAAGCCAC...CGGGCACATTTTGGGAAGTTGCATTCCTTTGTCTTCAAACTGTGAAGCATTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp CCGCCCTTGAGAACCAGTGCCTTTCCTGCTAAGCAATCCATAGTCCCCTTATGTGGATCTTTAGTGTTTTaGAGTGGAAGCCTTGAAGCA +
Preference number: 4 (lower is better)
Translates to: PPLRTSAFPAKQSIVPLCGSLVF*SGSLEA
Trigger: TGCTTCAAGGCTTCCACTGCAAAACACTAAAGATCC...ACATAAGGGGACTATGGATTGCTTAGCAGGAAAGGCACTGGTTCTCAAGGGCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR GCA 90 bp CTACCTGAATTCCACACTACTCATAATGCTACTGTCATTCGCACCTGTAAAATGGCTCCTCTCCTGACCTaGCCATCACAGTCGCCAGAT +
Preference number: 4 (lower is better)
Translates to: LPEFHTTHNATVIRTCKMAPLLT*PSQSPD
Trigger: ATCTGGCGACTGTGATGGGCAGGTCAGGAGAGGAGC...CATTTTACAGGTGCGAATGACAGTAGCATTATGAGTAGTGTGGAATTCAGGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR GCA 90 bp AGTCACAACATCAAGAACTTTCAGCAAACACCTAAGCTTTGGTGTCATCAGCTGGATGATGCAAGAAGATaGACGAAGGCTGGCGGCACC +
Preference number: 4 (lower is better)
Translates to: SHNIKNFQQTPKLWCHQLDDARR*TKAGGT
Trigger: GGTGCCGCCAGCCTTCGTGCATCTTCTTGCATCATC...CAGCTGATGACACCAAAGCTTAGGTGTTTGCTGAAAGTTCTTGATGTTGTGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR GCA 90 bp CCAAAATGTGCCCGAGGTGGAAGTACTTCCTGGCTAGTCGGTGTAAACGTTGCAAGAATCACATACACCTaGAGAATTTGCCTCCAAGTC +
Preference number: 4 (lower is better)
Translates to: PKCARGGSTSWLVGVNVARITYT*RICLQV
Trigger: GACTTGGAGGCAAATTCTGCAGGTGTATGTGATTCT...TGCAACGTTTACACCGACTAGCCAGGAAGTACTTCCACCTCGGGCACATTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR GCA 90 bp CAAGATAGAGCCAGCAGAGAGAACAGGGATCAAATCTGTCACAAACACACACATCTGTGTCTGCAAATCTaGCACTGTTTCCCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: QDRASRENRDQICHKHTHLCLQI*HCFPLW
Trigger: CCAGAGGGGGAAACAGTGGCAGATTTGCAGACACAG...ATGTGTGTGTTTGTGACAGATTTGATCCCTGTTCTCTCTGCTGGCTCTATCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CCA 90 bp TGCAGTGGAAGCCTTGAAGCAGAACCACTGGAATCAAGCATCCTCTGGAAGACTCAGCCACCTCCTGGATaGTCTTTAAGAAGGAAAGAT +
Preference number: 4 (lower is better)
Translates to: CSGSLEAEPLESSILWKTQPPPG*SLRRKD
Trigger: ATCTTTCCTTCTTAAAGACCATCCAGGAGGTGGCTG...AGTCTTCCAGAGGATGCTTGATTCCAGTGGTTCTGCTTCAAGGCTTCCACTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp GTCAAGATAGAGCCAGCAGAGAGAACAGGGATCAAATCTGTCACAAACACACACCCTGTAAATTTCTCATaGGCAGCTCCTTCAGTCCGG +
Preference number: 4 (lower is better)
Translates to: VKIEPAERTGIKSVTNTHPVNFS*AAPSVR
Trigger: CCGGACTGAAGGAGCTGCCCATGAGAAATTTACAGG...GTGTGTGTTTGTGACAGATTTGATCCCTGTTCTCTCTGCTGGCTCTATCTTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CCA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAATGTGGCAGCAGTCACTaGGGGACTTGCCACGGCAGC +
Preference number: 4 (lower is better)
Translates to: EIVERKCSFSGRLKSDSECGSSH*GTCHGS
Trigger: GCTGCCGTGGCAAGTCCCCCAGTGACTGCTGCCACA...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR CCA 90 bp ATTGGAATGACCTCAGGAGCTTTAAAAACTACGAATGCTTGGGTTTCAGCCCCAAGGTGTCCTTGCACGTaGCTTCGTCTCGGAATTTGC +
Preference number: 4 (lower is better)
Translates to: IGMTSGALKTTNAWVSAPRCPCT*LRLGIC
Trigger: GCAAATTCCGAGACGAAGCCACGTGCAAGGACACCT...TGGGGCTGAAACCCAAGCATTCGTAGTTTTTAAAGCTCCTGAGGTCATTCCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CCA 90 bp CAAACAAGTCAGTCTAACGCTCATGACTGGAAACCACTGGTCCATCAGTGGGGAAATATCCAGTTCCTGTaGATCCAGAGGAGGAGTATG +
Preference number: 4 (lower is better)
Translates to: QTSQSNAHDWKPLVHQWGNIQFL*IQRRSM
Trigger: CATACTCCTCCTCTGGATCCACAGGAACTGGATATT...TCCCCACTGATGGACCAGTGGTTTCCAGTCATGAGCGTTAGACTGACTTGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp CCTGCTGTGGCTTGGTCCTGGGTATCGAAAGAGTCTGGATTTTTAGGGCTCATAAATATCCAGTTCCTGTaGATCCAGAGGAGGAGTATG +
Preference number: 4 (lower is better)
Translates to: PAVAWSWVSKESGFLGLINIQFL*IQRRSM
Trigger: CATACTCCTCCTCTGGATCCACAGGAACTGGATATT...TATGAGCCCTAAAAATCCAGACTCTTTCGATACCCAGGACCAAGCCACAGCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp TTATTATTTGATGTGTCATCCTCTCTTGCTGATTTCATGACAGCAAGACAGGGGGGCAGACCTGGCCTGTaGCCTTGCAGCTGTTTTCAC +
Preference number: 4 (lower is better)
Translates to: LLFDVSSSLADFMTARQGGRPGL*PCSCFH
Trigger: GTGAAAACAGCTGCAAGGCCACAGGCCAGGTCTGCC...CCCCTGTCTTGCTGTCATGAAATCAGCAAGAGAGGATGACACATCAAATAATAA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp AGAGAGAACAGGGATCAAATCTGTCACAAACACACACATACACACACACACATACTGAGGCAGGCACTCTaGGTGGCACTGTATGCACTC +
Preference number: 4 (lower is better)
Translates to: RENRDQICHKHTHTHTHILRQAL*VALYAL
Trigger: GAGTGCATACAGTGCCACCCAGAGTGCCTGCCTCAG...TATGTGTGTGTGTGTATGTGTGTGTTTGTGACAGATTTGATCCCTGTTCTCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CCA 90 bp CTACCTGAATTCCACACTACTCATAATGCTACTGTCATTCGCACCTGTAAAATGTTTGGATGGCACAGGTaGCACACATGGCCGGCGTCT +
Preference number: 4 (lower is better)
Translates to: LPEFHTTHNATVIRTCKMFGWHR*HTWPAS
Trigger: AGACGCCGGCCATGTGTGCCACCTGTGCCATCCAAA...CATTTTACAGGTGCGAATGACAGTAGCATTATGAGTAGTGTGGAATTCAGGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp CCTCAAATTAGGAGATACGTTTTTGCGAGAACAAAAGCGGTGCTATCCTTAGGTTCCGTAGGTGCAGTTTaGATGGCACAGGTGGCACAC +
Preference number: 4 (lower is better)
Translates to: PQIRRYVFARTKAVLSLGSVGAV*MAQVAH
Trigger: GTGTGCCACCTGTGCCATCCAAACTGCACCTACGGA...ACCTAAGGATAGCACCGCTTTTGTTCTCGCAAAAACGTATCTCCTAATTTGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp AAGATAGAGCCAGCAGAGAGAACAGGGATCAAATCTGTCACAAACACACACATATCCGTAGGTGCAGTTTaGATGGCACAGGTGGCACAC +
Preference number: 4 (lower is better)
Translates to: KIEPAERTGIKSVTNTHISVGAV*MAQVAH
Trigger: GTGTGCCACCTGTGCCATCCAAACTGCACCTACGGA...TATGTGTGTGTTTGTGACAGATTTGATCCCTGTTCTCTCTGCTGGCTCTATCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CCA 90 bp TGGAGGACCTGCTGTGGCTTGGTCCTGGGTATCGAAAGAGTCTGGATTTTTAGGAACTTTCTCACCTTCTaGGATCCAGAGTCCCTTATA +
Preference number: 4 (lower is better)
Translates to: WRTCCGLVLGIERVWIFRNFLTF*DPESLI
Trigger: TATAAGGGACTCTGGATCCCAGAAGGTGAGAAAGTT...CCTAAAAATCCAGACTCTTTCGATACCCAGGACCAAGCCACAGCAGGTCCTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp CACAACAAAGAGCTTGTGCAGGCTCGGTCATGTGTTTATCTGCTCCTTACGCCCAACTTTCTCACCTTCTaGGATCCAGAGTCCCTTATA +
Preference number: 4 (lower is better)
Translates to: HNKELVQARSCVYLLLTPNFLTF*DPESLI
Trigger: TATAAGGGACTCTGGATCCCAGAAGGTGAGAAAGTT...GGGCGTAAGGAGCAGATAAACACATGACCGAGCCTGCACAAGCTCTTTGTTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CCA 90 bp GCAAACAACCAGACACAACAAAGAGCTTGTGCAGGCTCGGTCATGTGTTTATCTCAATGCAAGCCACGGTaGAATTGTTGCTGGTTGCAC +
Preference number: 4 (lower is better)
Translates to: ANNQTQQRACAGSVMCLSQCKPR*NCCWLH
Trigger: GTGCAACCAGCAACAATTCCACCGTGGCTTGCATTG...AGATAAACACATGACCGAGCCTGCACAAGCTCTTTGTTGTGTCTGGTTGTTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CCA 90 bp CCTGCTGTGGCTTGGTCCTGGGTATCGAAAGAGTCTGGATTTTTAGGGCTCATATATGTATTCAGGCACTaGGAGGAAGGTGTCGTCTAT +
Preference number: 4 (lower is better)
Translates to: PAVAWSWVSKESGFLGLIYVFRH*EEGVVY
Trigger: ATAGACGACACCTTCCTCCCAGTGCCTGAATACATA...TATGAGCCCTAAAAATCCAGACTCTTTCGATACCCAGGACCAAGCCACAGCAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp CAGCTGTGGGCTATTGGTCCAAATGCTGATGAATCCAATGTGGGCTGGAATCCGCTTAAAGATGCCATTTaGCTTGGCTTCCTTGGGAAA +
Preference number: 4 (lower is better)
Translates to: QLWAIGPNADESNVGWNPLKDAI*LGFLGK
Trigger: TTTCCCAAGGAAGCCAAGCCAAATGGCATCTTTAAG...CGGATTCCAGCCCACATTGGATTCATCAGCATTTGGACCAATAGCCCACAGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp CTACCTGAATTCCACACTACTCATAATGCTACTGTCATTCGCACCTGTAAAATGCCACTGGTCCATCAGTaGGGAGTAAGTACCGTGGGG +
Preference number: 4 (lower is better)
Translates to: LPEFHTTHNATVIRTCKMPLVHQ*GVSTVG
Trigger: CCCCACGGTACTTACTCCCCACTGATGGACCAGTGG...CATTTTACAGGTGCGAATGACAGTAGCATTATGAGTAGTGTGGAATTCAGGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp CTTAGAGGGAGCAGGTTGTTTAGGGTGACTGACCTCAGCCTTATGTGGACTTTATCTAACGCTCATGACTaGAAACCACTGGTCCATCAG +
Preference number: 4 (lower is better)
Translates to: LRGSRLFRVTDLSLMWTLSNAHD*KPLVHQ
Trigger: CTGATGGACCAGTGGTTTCCAGTCATGAGCGTTAGA...TAAAGTCCACATAAGGCTGAGGTCAGTCACCCTAAACAACCTGCTCCCTCTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CCA 90 bp CTTAGAGGGAGCAGGTTGTTTAGGGTGACTGACCTCAGCCTTATGTGGACTTTACCACATTCTCAGCTGTaGGCTATTGGTCCAAATGCT +
Preference number: 4 (lower is better)
Translates to: LRGSRLFRVTDLSLMWTLPHSQL*AIGPNA
Trigger: AGCATTTGGACCAATAGCCCACAGCTGAGAATGTGG...TAAAGTCCACATAAGGCTGAGGTCAGTCACCCTAAACAACCTGCTCCCTCTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CCA 90 bp AGTCACAACATCAAGAACTTTCAGCAAACACCTAAGCTTTGGTGTCATCAGCTGTCCAAGCTCATCCCCTaGCTTAGAGGGAGCAGGTTG +
Preference number: 4 (lower is better)
Translates to: SHNIKNFQQTPKLWCHQLSKLIP*LRGSRL
Trigger: CAACCTGCTCCCTCTAAGCCAGGGGATGAGCTTGGA...CAGCTGATGACACCAAAGCTTAGGTGTTTGCTGAAAGTTCTTGATGTTGTGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CCA 90 bp GCTAGAAATTTTGCAGATTCATTCTTACAACAGAGGTACAGCAAACAACCAGACGCTGGAGGGAGCACCTaGCTTGGACACTGGAGACTG +
Preference number: 4 (lower is better)
Translates to: ARNFADSFLQQRYSKQPDAGGST*LGHWRL
Trigger: CAGTCTCCAGTGTCCAAGCCAGGTGCTCCCTCCAGC...GTCTGGTTGTTTGCTGTACCTCTGTTGTAAGAATGAATCTGCAAAATTTCTAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR TCA 90 bp TTTGATGTGTCATCCTCTCTTGCTGATTTCATGACAGCAAGACAGGGGCAGCATTTTTCAGGCCAAGCCTaGATCAGCAAAAACCCTGTG +
Preference number: 4 (lower is better)
Translates to: FDVSSSLADFMTARQGQHFSGQA*ISKNPV
Trigger: CACAGGGTTTTTGCTGATTCAGGCTTGGCCTGAAAA...ATGCTGCCCCTGTCTTGCTGTCATGAAATCAGCAAGAGAGGATGACACATCAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR TCA 90 bp GCAAACAACCAGACACAACAAAGAGCTTGTGCAGGCTCGGTCATGTGTTTATCTTTTTCAGGCCAAGCCTaGATCAGCAAAAACCCTGTG +
Preference number: 4 (lower is better)
Translates to: ANNQTQQRACAGSVMCLSFSGQA*ISKNPV
Trigger: CACAGGGTTTTTGCTGATTCAGGCTTGGCCTGAAAA...AGATAAACACATGACCGAGCCTGCACAAGCTCTTTGTTGTGTCTGGTTGTTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR TCA 90 bp ACACAGATGTACACACATCATGAACACTCACACACACAGATGTGTATGTCCGTGTGGTCCTGCCGCGTATaGTTTCTAGGTTCTCAAAGG +
Preference number: 4 (lower is better)
Translates to: TQMYTHHEHSHTQMCMSVWSCRV*FLGSQR
Trigger: CCTTTGAGAACCTAGAAATCATACGCGGCAGGACCA...CACGGACATACACATCTGTGTGTGTGAGTGTTCATGATGTGTGTACATCTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR TCA 90 bp CACACTGCCTGCTACATAGTTTTTATCCCAGGTATAATTTGTGAGGAATGTATAATTCCCTGCCTCGGCTaGCATTCCGGCAAGAGACGC +
Preference number: 4 (lower is better)
Translates to: HTACYIVFIPGIICEECIIPCLG*HSGKRR
Trigger: GCGTCTCTTGCCGGAATGTCAGCCGAGGCAGGGAAT...TATACATTCCTCACAAATTATACCTGGGATAAAAACTATGTAGCAGGCAGTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR TCA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAAATTCCCTGCCTCGGCTaGCATTCCGGCAAGAGACGC +
Preference number: 4 (lower is better)
Translates to: EIVERKCSFSGRLKSDSEIPCLG*HSGKRR
Trigger: GCGTCTCTTGCCGGAATGTCAGCCGAGGCAGGGAAT...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR TCA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAAGTGATGTTCATGGCCTaGGGCAGGCACTCTGGGTGG +
Preference number: 4 (lower is better)
Translates to: EIVERKCSFSGRLKSDSEVMFMA*GRHSGW
Trigger: CCACCCAGAGTGCCTGCCTCAGGCCATGAACATCAC...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR TCA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAACCCGTCCTGTGCAGGTaGTGTTCATGGCCTGAGGCA +
Preference number: 4 (lower is better)
Translates to: EIVERKCSFSGRLKSDSEPVLCR*CSWPEA
Trigger: TGCCTCAGGCCATGAACATCACCTGCACAGGACGGG...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR TCA 90 bp CTACCTGAATTCCACACTACTCATAATGCTACTGTCATTCGCACCTGTAAAATGGTACATATGGGTGGCTaGGGGAGGCGTTCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: LPEFHTTHNATVIRTCKMVHMGG*GRRSPF
Trigger: GAAAGGAGAACGCCTCCCTCAGCCACCCATATGTAC...CATTTTACAGGTGCGAATGACAGTAGCATTATGAGTAGTGTGGAATTCAGGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR TCA 90 bp CCTCAAATTAGGAGATACGTTTTTGCGAGAACAAAAGCGGTGCTATCCTTAGGTCTCTTGCTGATTTCATaGCAGCAAGACAGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: PQIRRYVFARTKAVLSLGLLLIS*QQDRGS
Trigger: GCTGCCCCTGTCTTGCTGTCATGAAATCAGCAAGAG...ACCTAAGGATAGCACCGCTTTTGTTCTCGCAAAAACGTATCTCCTAATTTGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR TCA 90 bp GAATTTGCCTCCAAGTCCATGTCCTTGTGGCTAATCCCTAGGCCAGTAGTTCTCATTTTTGTAGTCTTCTaGTCTATGCCCCAAAGGACC +
Preference number: 4 (lower is better)
Translates to: EFASKSMSLWLIPRPVVLIFVVF*SMPQRT
Trigger: GGTCCTTTGGGGCATAGATCAGAAGACTACAAAAAT...GAGAACTACTGGCCTAGGGATTAGCCACAAGGACATGGACTTGGAGGCAAATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR TCA 90 bp AGTCTAAGGAAGAATTCCATCCCCTCCGTTTCTTCTTTGCCCAGGAAGGGACAGAAGTGCTTGAATAGATaGCTCAAGGCAGAGACACTT +
Preference number: 4 (lower is better)
Translates to: SLRKNSIPSVSSLPRKGQKCLNR*LKAETL
Trigger: AAGTGTCTCTGCCTTGAGTCATCTATTCAAGCACTT...CTGTCCCTTCCTGGGCAAAGAAGAAACGGAGGGGATGGAATTCTTCCTTAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR TCA 90 bp CCTGCTGTGGCTTGGTCCTGGGTATCGAAAGAGTCTGGATTTTTAGGGCTCATAGGATGGGGTGGATATTaGCTAGGAGAGTTTAAAACA +
Preference number: 4 (lower is better)
Translates to: PAVAWSWVSKESGFLGLIGWGGY*LGEFKT
Trigger: TGTTTTAAACTCTCCTAGTCAATATCCACCCCATCC...TATGAGCCCTAAAAATCCAGACTCTTTCGATACCCAGGACCAAGCCACAGCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR TCA 90 bp TGCAGTGGAAGCCTTGAAGCAGAACCACTGGAATCAAGCATCCTCTGGAAGACTGGATGGGGTGGATATTaGCTAGGAGAGTTTAAAACA +
Preference number: 4 (lower is better)
Translates to: CSGSLEAEPLESSILWKTGWGGY*LGEFKT
Trigger: TGTTTTAAACTCTCCTAGTCAATATCCACCCCATCC...AGTCTTCCAGAGGATGCTTGATTCCAGTGGTTCTGCTTCAAGGCTTCCACTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR TCA 90 bp CAGCTGTGGGCTATTGGTCCAAATGCTGATGAATCCAATGTGGGCTGGAATCCGATGCTTAGGGGTATTTaGGAGCATAATAGAGTGGAA +
Preference number: 4 (lower is better)
Translates to: QLWAIGPNADESNVGWNPMLRGI*EHNRVE
Trigger: TTCCACTCTATTATGCTCTCAAATACCCCTAAGCAT...CGGATTCCAGCCCACATTGGATTCATCAGCATTTGGACCAATAGCCCACAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR TCA 90 bp TGCAACTTCCCAAAATGTGCCCGAGGTGGAAGTACTTCCTGGCTAGTCGGTGTATTTCCCAGTTCTGACTaGAATATTTCTGCATGTCCT +
Preference number: 4 (lower is better)
Translates to: CNFPKCARGGSTSWLVGVFPSSD*NISACP
Trigger: AGGACATGCAGAAATATTTCAGTCAGAACTGGGAAA...TACACCGACTAGCCAGGAAGTACTTCCACCTCGGGCACATTTTGGGAAGTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR TCA 90 bp TGCAACTTCCCAAAATGTGCCCGAGGTGGAAGTACTTCCTGGCTAGTCGGTGTATCTGTTTCCCAGTTCTaGCTGAAATATTTCTGCATG +
Preference number: 4 (lower is better)
Translates to: CNFPKCARGGSTSWLVGVSVSQF*LKYFCM
Trigger: CATGCAGAAATATTTCAGTCAGAACTGGGAAACAGA...TACACCGACTAGCCAGGAAGTACTTCCACCTCGGGCACATTTTGGGAAGTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR TCA 90 bp ATTGGAATGACCTCAGGAGCTTTAAAAACTACGAATGCTTGGGTTTCAGCCCCACCTTTTATTCTACTCTaGCGGGGGCTCTGGTACAGA +
Preference number: 4 (lower is better)
Translates to: IGMTSGALKTTNAWVSAPPFILL*RGLWYR
Trigger: TCTGTACCAGAGCCCCCGTCAGAGTAGAATAAAAGG...TGGGGCTGAAACCCAAGCATTCGTAGTTTTTAAAGCTCCTGAGGTCATTCCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR TCA 90 bp CAAACAAGTCAGTCTAACGCTCATGACTGGAAACCACTGGTCCATCAGTGGGGACTAACCAAAGTGTGCTaGACATTATTAGGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: QTSQSNAHDWKPLVHQWGLTKVC*TLLGSP
Trigger: TGGAGAGCCTAATAATGTTCAGCACACTTTGGTTAG...TCCCCACTGATGGACCAGTGGTTTCCAGTCATGAGCGTTAGACTGACTTGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR GCA 90 bp TTTGATGTGTCATCCTCTCTTGCTGATTTCATGACAGCAAGACAGGGGCAGCATTCAAAAGTGCCCAACTaGGTGAGCTTGTTACTCGTG +
Preference number: 4 (lower is better)
Translates to: FDVSSSLADFMTARQGQHSKVPN*VSLLLV
Trigger: CACGAGTAACAAGCTCACGCAGTTGGGCACTTTTGA...ATGCTGCCCCTGTCTTGCTGTCATGAAATCAGCAAGAGAGGATGACACATCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAATGTCCCGCCACTGGATaGTCTCCACGTTGCACAGGG +
Preference number: 4 (lower is better)
Translates to: EIVERKCSFSGRLKSDSECPATG*SPRCTG
Trigger: CCCTGTGCAACGTGGAGAGCATCCAGTGGCGGGACA...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR GCA 90 bp CCTCAAATTAGGAGATACGTTTTTGCGAGAACAAAAGCGGTGCTATCCTTAGGTCACACTTTTGGCAGCTaGCCAGGTGGTTCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: PQIRRYVFARTKAVLSLGHTFGS*PGGSGS
Trigger: ACTTCCAGAACCACCTGGGCAGCTGCCAAAAGTGTG...ACCTAAGGATAGCACCGCTTTTGTTCTCGCAAAAACGTATCTCCTAATTTGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR GCA 90 bp GCTAGAAATTTTGCAGATTCATTCTTACAACAGAGGTACAGCAAACAACCAGACGCAGTTCTCCTCTCCTaGACCCCAGCAGCTCCCATT +
Preference number: 4 (lower is better)
Translates to: ARNFADSFLQQRYSKQPDAVLLS*TPAAPI
Trigger: AATGGGAGCTGCTGGGGTGCAGGAGAGGAGAACTGC...GTCTGGTTGTTTGCTGTACCTCTGTTGTAAGAATGAATCTGCAAAATTTCTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR GCA 90 bp CTACCTGAATTCCACACTACTCATAATGCTACTGTCATTCGCACCTGTAAAATGCACCCTCCAGAAGGTTaGACTTGTCCACGCATTCCC +
Preference number: 4 (lower is better)
Translates to: LPEFHTTHNATVIRTCKMHPPEG*TCPRIP
Trigger: GGGAATGCGTGGACAAGTGCAACCTTCTGGAGGGTG...CATTTTACAGGTGCGAATGACAGTAGCATTATGAGTAGTGTGGAATTCAGGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAACACATGGCCGGCGTCTaGGTACTTCCAGACCAGGGT +
Preference number: 4 (lower is better)
Translates to: EIVERKCSFSGRLKSDSEHMAGV*VLPDQG
Trigger: ACCCTGGTCTGGAAGTACGCAGACGCCGGCCATGTG...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR GCA 90 bp CCTCAAATTAGGAGATACGTTTTTGCGAGAACAAAAGCGGTGCTATCCTTAGGTCAGTGCATCCGTAGGTaGAGTTTGGATGGCACAGGT +
Preference number: 4 (lower is better)
Translates to: PQIRRYVFARTKAVLSLGQCIRR*SLDGTG
Trigger: ACCTGTGCCATCCAAACTGCACCTACGGATGCACTG...ACCTAAGGATAGCACCGCTTTTGTTCTCGCAAAAACGTATCTCCTAATTTGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp CACACTGCCTGCTACATAGTTTTTATCCCAGGTATAATTTGTGAGGAATGTATAGTCCCTTATACACCGTaGCGAACGCACCGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: HTACYIVFIPGIICEECIVPYTP*RTHRSP
Trigger: TGGGCTCCGGTGCGTTCGGCACGGTGTATAAGGGAC...TATACATTCCTCACAAATTATACCTGGGATAAAAACTATGTAGCAGGCAGTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR GCA 90 bp GCAAACAACCAGACACAACAAAGAGCTTGTGCAGGCTCGGTCATGTGTTTATCTGTGATCTTGACATGCTaGGGTGTTTTCACCAGTACG +
Preference number: 4 (lower is better)
Translates to: ANNQTQQRACAGSVMCLSVILTC*GVFTST
Trigger: CGTACTGGTGAAAACACCGCAGCATGTCAAGATCAC...AGATAAACACATGACCGAGCCTGCACAAGCTCTTTGTTGTGTCTGGTTGTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR GCA 90 bp TTTGATGTGTCATCCTCTCTTGCTGATTTCATGACAGCAAGACAGGGGCAGCATCTTTGGGCGACTATCTaGGTCTATCATCCAGCACTT +
Preference number: 4 (lower is better)
Translates to: FDVSSSLADFMTARQGQHLWATI*VYHPAL
Trigger: AAGTGCTGGATGATAGACGCAGATAGTCGCCCAAAG...ATGCTGCCCCTGTCTTGCTGTCATGAAATCAGCAAGAGAGGATGACACATCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp ACACAGATGTACACACATCATGAACACTCACACACACAGATGTGTATGTCCGTGGGAATTGTTGCTGGTTaGACTCAGAGAGCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: TQMYTHHEHSHTQMCMSVGIVAG*TQRAQE
Trigger: CTCCTGAGCTCTCTGAGTGCAACCAGCAACAATTCC...CACGGACATACACATCTGTGTGTGTGAGTGTTCATGATGTGTGTACATCTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR GCA 90 bp TTCTGCTCAAAGGGACAATATTCTTGCTGGATGCGTTTCTGTAAATGCTTCACAGGAAGGTGTCGTCTATaGTGTCCTCAGTCAAGGCGC +
Preference number: 4 (lower is better)
Translates to: FCSKGQYSCWMRFCKCFTGRCRL*CPQSRR
Trigger: GCGCCTTGACTGAGGACAGCATAGACGACACCTTCC...TGTGAAGCATTTACAGAAACGCATCCAGCAAGAATATTGTCCCTTTGAGCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp ATTGGAATGACCTCAGGAGCTTTAAAAACTACGAATGCTTGGGTTTCAGCCCCAAAGACTTGTGGCTTGTaGTCCTTGCTCACAGTTGGG +
Preference number: 4 (lower is better)
Translates to: IGMTSGALKTTNAWVSAPKTCGL*SLLTVG
Trigger: CCCAACTGTGAGCAAGGAGCACAAGCCACAAGTCTT...TGGGGCTGAAACCCAAGCATTCGTAGTTTTTAAAGCTCCTGAGGTCATTCCAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR GCA 90 bp ATAACTTACTTAGAGAATGCAGAGGGTCCCAGGGCGTTTTCAAAGCTCAGGTGGCACTTACAACTGACCTaGCTCATCGATCATCTGCTT +
Preference number: 4 (lower is better)
Translates to: ITYLENAEGPRAFSKLRWHLQLT*LIDHLL
Trigger: AAGCAGATGATCGATGAGGCAGGTCAGTTGTAAGTG...CCACCTGAGCTTTGAAAACGCCCTGGGACCCTCTGCATTCTCTAAGTAAGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR GCA 90 bp AGTCACAACATCAAGAACTTTCAGCAAACACCTAAGCTTTGGTGTCATCAGCTGAGGATGCATCCACAGTaGTCCCCCTTACAACCTGGA +
Preference number: 4 (lower is better)
Translates to: SHNIKNFQQTPKLWCHQLRMHPQ*SPLQPG
Trigger: TCCAGGTTGTAAGGGGGAGCACTGTGGATGCATCCT...CAGCTGATGACACCAAAGCTTAGGTGTTTGCTGAAAGTTCTTGATGTTGTGACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR GCA 90 bp GAATTTGCCTCCAAGTCCATGTCCTTGTGGCTAATCCCTAGGCCAGTAGTTCTCAACTTTGATGAATGTTaGAATAACCAGGGGGTGCTC +
Preference number: 4 (lower is better)
Translates to: EFASKSMSLWLIPRPVVLNFDEC*NNQGVL
Trigger: GAGCACCCCCTGGTTATTGCAACATTCATCAAAGTT...GAGAACTACTGGCCTAGGGATTAGCCACAAGGACATGGACTTGGAGGCAAATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR GCA 90 bp GCAAACAACCAGACACAACAAAGAGCTTGTGCAGGCTCGGTCATGTGTTTATCTGGTCATGTGTTTATCTaGTCCTTACGCCCTTCACTG +
Preference number: 4 (lower is better)
Translates to: ANNQTQQRACAGSVMCLSGHVFI*SLRPSL
Trigger: CAGTGAAGGGCGTAAGGAGCAGATAAACACATGACC...AGATAAACACATGACCGAGCCTGCACAAGCTCTTTGTTGTGTCTGGTTGTTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CCA 90 bp GCTAGAAATTTTGCAGATTCATTCTTACAACAGAGGTACAGCAAACAACCAGACTCTCCCGATCAATACTaGACGGAGTCAGGGGGCCGT +
Preference number: 4 (lower is better)
Translates to: ARNFADSFLQQRYSKQPDSPDQY*TESGGR
Trigger: ACGGCCCCCTGACTCCGTCCAGTATTGATCGGGAGA...GTCTGGTTGTTTGCTGTACCTCTGTTGTAAGAATGAATCTGCAAAATTTCTAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CCA 90 bp TGCAGTGGAAGCCTTGAAGCAGAACCACTGGAATCAAGCATCCTCTGGAAGACTTTGTTACTCGTGCCTTaGCAAACTTTCTTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: CSGSLEAEPLESSILWKTLLLVP*QTFFSS
Trigger: GGAGGAAAAGAAAGTTTGCCAAGGCACGAGTAACAA...AGTCTTCCAGAGGATGCTTGATTCCAGTGGTTCTGCTTCAAGGCTTCCACTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp CTACCTGAATTCCACACTACTCATAATGCTACTGTCATTCGCACCTGTAAAATGCCCAGCAGCTCCCATTaGGACAGCTTGGATCACACT +
Preference number: 4 (lower is better)
Translates to: LPEFHTTHNATVIRTCKMPSSSH*DSLDHT
Trigger: AGTGTGATCCAAGCTGTCCCAATGGGAGCTGCTGGG...CATTTTACAGGTGCGAATGACAGTAGCATTATGAGTAGTGTGGAATTCAGGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp GCAAACAACCAGACACAACAAAGAGCTTGTGCAGGCTCGGTCATGTGTTTATCTACTTCTTCACGCAGGTaGCACCAAAGCTGTATTTGC +
Preference number: 4 (lower is better)
Translates to: ANNQTQQRACAGSVMCLSTSSRR*HQSCIC
Trigger: GCAAATACAGCTTTGGTGCCACCTGCGTGAAGAAGT...AGATAAACACATGACCGAGCCTGCACAAGCTCTTTGTTGTGTCTGGTTGTTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CCA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAAGCCACCGGCAGGATGTaGAGATCGCCACTGATGGAG +
Preference number: 4 (lower is better)
Translates to: EIVERKCSFSGRLKSDSEATGRM*RSPLME
Trigger: CTCCATCAGTGGCGATCTCCACATCCTGCCGGTGGC...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR CCA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAAAAGGCATGGCAGACCTaGCCTGTGGCCTTGCAGCTG +
Preference number: 4 (lower is better)
Translates to: EIVERKCSFSGRLKSDSEKAWQT*PVALQL
Trigger: CAGCTGCAAGGCCACAGGCCAGGTCTGCCATGCCTT...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR CCA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAACACAGGTGGCACACATaGCCGGCGTCTGCGTACTTC +
Preference number: 4 (lower is better)
Translates to: EIVERKCSFSGRLKSDSEHRWHT*PASAYF
Trigger: GAAGTACGCAGACGCCGGCCATGTGTGCCACCTGTG...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR CCA 90 bp AGTCACAACATCAAGAACTTTCAGCAAACACCTAAGCTTTGGTGTCATCAGCTGCTTAGGCCCATTCGTTaGACAGCCTTCAAGACCTGG +
Preference number: 4 (lower is better)
Translates to: SHNIKNFQQTPKLWCHQLLRPIR*TAFKTW
Trigger: CCAGGTCTTGAAGGCTGTCCAACGAATGGGCCTAAG...CAGCTGATGACACCAAAGCTTAGGTGTTTGCTGAAAGTTCTTGATGTTGTGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CCA 90 bp AGTCTAAGGAAGAATTCCATCCCCTCCGTTTCTTCTTTGCCCAGGAAGGGACAGTTCCGTCATATGGCTTaGATCCAAAGGTCATCAACT +
Preference number: 4 (lower is better)
Translates to: SLRKNSIPSVSSLPRKGQFRHMA*IQRSST
Trigger: AGTTGATGACCTTTGGATCCAAGCCATATGACGGAA...CTGTCCCTTCCTGGGCAAAGAAGAAACGGAGGGGATGGAATTCTTCCTTAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp AACCAGACACAACAAAGAGCTTGTGCAGGCTCGGTCATGTGTTTATCTGCTCCTAGGGATTCCGTCATATaGCTTGGATCCAAAGGTCAT +
Preference number: 4 (lower is better)
Translates to: NQTQQRACAGSVMCLSAPRDSVI*LGSKGH
Trigger: ATGACCTTTGGATCCAAGCCATATGACGGAATCCCT...AGGAGCAGATAAACACATGACCGAGCCTGCACAAGCTCTTTGTTGTGTCTGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CCA 90 bp TTATTATTTGATGTGTCATCCTCTCTTGCTGATTTCATGACAGCAAGACAGGGGGATGGTACATATGGGTaGCTGAGGGAGGCGTTCTCC +
Preference number: 4 (lower is better)
Translates to: LLFDVSSSLADFMTARQGDGTYG*LREAFS
Trigger: GGAGAACGCCTCCCTCAGCCACCCATATGTACCATC...CCCCTGTCTTGCTGTCATGAAATCAGCAAGAGAGGATGACACATCAAATAATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp AAGATAGAGCCAGCAGAGAGAACAGGGATCAAATCTGTCACAAACACACACATACATCGATGGTACATATaGGTGGCTGAGGGAGGCGTT +
Preference number: 4 (lower is better)
Translates to: KIEPAERTGIKSVTNTHIHRWYI*VAEGGV
Trigger: AACGCCTCCCTCAGCCACCCATATGTACCATCGATG...TATGTGTGTGTTTGTGACAGATTTGATCCCTGTTCTCTCTGCTGGCTCTATCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CCA 90 bp TGCAACTTCCCAAAATGTGCCCGAGGTGGAAGTACTTCCTGGCTAGTCGGTGTATCATACTATCCTCCGTaGTCATGCTCCAATAAATTC +
Preference number: 4 (lower is better)
Translates to: CNFPKCARGGSTSWLVGVSYYPP*SCSNKF
Trigger: GAATTTATTGGAGCATGACCACGGAGGATAGTATGA...TACACCGACTAGCCAGGAAGTACTTCCACCTCGGGCACATTTTGGGAAGTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp TTTGATGTGTCATCCTCTCTTGCTGATTTCATGACAGCAAGACAGGGGCAGCATGAATCAAGCATCCTCTaGAAGACTTGTGGCTTGTGC +
Preference number: 4 (lower is better)
Translates to: FDVSSSLADFMTARQGQHESSIL*KTCGLC
Trigger: GCACAAGCCACAAGTCTTCCAGAGGATGCTTGATTC...ATGCTGCCCCTGTCTTGCTGTCATGAAATCAGCAAGAGAGGATGACACATCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp TGCAACTTCCCAAAATGTGCCCGAGGTGGAAGTACTTCCTGGCTAGTCGGTGTAGAATCCAATGTGGGCTaGAATCCGAGTTATTATTTG +
Preference number: 4 (lower is better)
Translates to: CNFPKCARGGSTSWLVGVESNVG*NPSYYL
Trigger: CAAATAATAACTCGGATTCCAGCCCACATTGGATTC...TACACCGACTAGCCAGGAAGTACTTCCACCTCGGGCACATTTTGGGAAGTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp CCTGCTGTGGCTTGGTCCTGGGTATCGAAAGAGTCTGGATTTTTAGGGCTCATACTGATGAATCCAATGTaGGCTGGAATCCGAGTTATT +
Preference number: 4 (lower is better)
Translates to: PAVAWSWVSKESGFLGLILMNPM*AGIRVI
Trigger: AATAACTCGGATTCCAGCCCACATTGGATTCATCAG...TATGAGCCCTAAAAATCCAGACTCTTTCGATACCCAGGACCAAGCCACAGCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp TTTGATGTGTCATCCTCTCTTGCTGATTTCATGACAGCAAGACAGGGGCAGCATCTTTTAGGGAACTTGTaGGATGCTCCAAGCTCATCC +
Preference number: 4 (lower is better)
Translates to: FDVSSSLADFMTARQGQHLLGNL*DAPSSS
Trigger: GGATGAGCTTGGAGCATCCCACAAGTTCCCTAAAAG...ATGCTGCCCCTGTCTTGCTGTCATGAAATCAGCAAGAGAGGATGACACATCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CCA 90 bp TTCTGCTCAAAGGGACAATATTCTTGCTGGATGCGTTTCTGTAAATGCTTCACAGCTGTACCCCTGGTATaGCAGGTGTGGCTGGTGAAA +
Preference number: 4 (lower is better)
Translates to: FCSKGQYSCWMRFCKCFTAVPLV*QVWLVK
Trigger: TTTCACCAGCCACACCTGCCATACCAGGGGTACAGC...TGTGAAGCATTTACAGAAACGCATCCAGCAAGAATATTGTCCCTTTGAGCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CCA 90 bp GTAAATGCTTCACAGTTTGAAGACAAAGGAATGCAACTTCCCAAAATGTGCCCGATAACTTCTCTAGGGTaGCTGGGCCCAGGCTTGGTA +
Preference number: 4 (lower is better)
Translates to: VNASQFEDKGMQLPKMCPITSLG*LGPGLV
Trigger: TACCAAGCCTGGGCCCAGCCACCCTAGAGAAGTTAT...CGGGCACATTTTGGGAAGTTGCATTCCTTTGTCTTCAAACTGTGAAGCATTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CCA 90 bp TTTGATGTGTCATCCTCTCTTGCTGATTTCATGACAGCAAGACAGGGGCAGCATTCTCAGCGACAGATGTaGAGGTCTTTGTGTCTTAGC +
Preference number: 4 (lower is better)
Translates to: FDVSSSLADFMTARQGQHSQRQM*RSLCLS
Trigger: GCTAAGACACAAAGACCTCCACATCTGTCGCTGAGA...ATGCTGCCCCTGTCTTGCTGTCATGAAATCAGCAAGAGAGGATGACACATCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CCA 90 bp CTTAGAGGGAGCAGGTTGTTTAGGGTGACTGACCTCAGCCTTATGTGGACTTTACTCCCTTCTAGTGCTTaGAGAACCTTCATGGAAACT +
Preference number: 4 (lower is better)
Translates to: LRGSRLFRVTDLSLMWTLLPSSA*RTFMET
Trigger: AGTTTCCATGAAGGTTCTCCAAGCACTAGAAGGGAG...TAAAGTCCACATAAGGCTGAGGTCAGTCACCCTAAACAACCTGCTCCCTCTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CCA 90 bp CCAAAATGTGCCCGAGGTGGAAGTACTTCCTGGCTAGTCGGTGTAAACGTTGCACGTTTTCTTTCACTGTaGGAAATAAAGGCTACTTGG +
Preference number: 4 (lower is better)
Translates to: PKCARGGSTSWLVGVNVARFLSL*EIKATW
Trigger: CCAAGTAGCCTTTATTTCCCACAGTGAAAGAAAACG...TGCAACGTTTACACCGACTAGCCAGGAAGTACTTCCACCTCGGGCACATTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CCA 90 bp AAGATAGAGCCAGCAGAGAGAACAGGGATCAAATCTGTCACAAACACACACATACCCATTGGGACAGCTTaGATCACACTTTTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: KIEPAERTGIKSVTNTHIPIGTA*ITLLAL
Trigger: CAGGGCCAAAAGTGTGATCCAAGCTGTCCCAATGGG...TATGTGTGTGTTTGTGACAGATTTGATCCCTGTTCTCTCTGCTGGCTCTATCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455089.5
3UTR CAA 72 bp AAAAACTACGAATGCTTGGGTTTCAGCCCCAGAGATTaGCGTTTAATCGGTCTGAGGTGTAGCTGGGCTTCA +
Preference number: 4 (lower is better)
Translates to: KNYECLGFSPRD*RLIGLRCSWAS
Trigger: TGAAGCCCAGCTACACCTCAGACCGATTAAACGCAAATCTCTGGGGCTGAAACCCAAGCATTCGTAGTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR CAA 72 bp CCAGCGTTTTCTTTCACTGTGGGAAATAAAGGCTACTaGGTTGCTTTAGGGAGGGCAACAATGTCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: PAFSFTVGNKGY*VALGRATMSAA
Trigger: TGCAGCTGACATTGTTGCCCTCCCTAAAGCAACCAAGTAGCCTTTATTTCCCACAGTGAAAGAAAACGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR TCA 90 bp TTCTGCTCAAAGGGACAATATTCTTGCTGGATGCGTTTCTGTAAATGCTTCACAAAGTGCCCAACTGCGTaGGCTTGTTACTCGTGCCTT +
Preference number: 4 (lower is better)
Translates to: FCSKGQYSCWMRFCKCFTKCPTA*ACYSCL
Trigger: AAGGCACGAGTAACAAGCTCACGCAGTTGGGCACTT...TGTGAAGCATTTACAGAAACGCATCCAGCAAGAATATTGTCCCTTTGAGCAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR TCA 90 bp AGTCACAACATCAAGAACTTTCAGCAAACACCTAAGCTTTGGTGTCATCAGCTGTGGTCCTGCCGCGTATaGTTTCTAGGTTCTCAAAGG +
Preference number: 4 (lower is better)
Translates to: SHNIKNFQQTPKLWCHQLWSCRV*FLGSQR
Trigger: CCTTTGAGAACCTAGAAATCATACGCGGCAGGACCA...CAGCTGATGACACCAAAGCTTAGGTGTTTGCTGAAAGTTCTTGATGTTGTGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR TCA 90 bp ACACAGATGTACACACATCATGAACACTCACACACACAGATGTGTATGTCCGTGACTGCAAGAGAAAACTaGCCATGTTGCTTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: TQMYTHHEHSHTQMCMSVTAREN*PCCLVL
Trigger: CAGGACCAAGCAACATGGTCAGTTTTCTCTTGCAGT...CACGGACATACACATCTGTGTGTGTGAGTGTTCATGATGTGTGTACATCTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR TCA 90 bp CTACCTGAATTCCACACTACTCATAATGCTACTGTCATTCGCACCTGTAAAATGCTCTTGCTGATTTCATaGCAGCAAGACAGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: LPEFHTTHNATVIRTCKMLLLIS*QQDRGS
Trigger: GCTGCCCCTGTCTTGCTGTCATGAAATCAGCAAGAG...CATTTTACAGGTGCGAATGACAGTAGCATTATGAGTAGTGTGGAATTCAGGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR TCA 90 bp TTTGATGTGTCATCCTCTCTTGCTGATTTCATGACAGCAAGACAGGGGCAGCATGTCATCCTCTCTTGCTaGTTTCATGACAGCAAGACA +
Preference number: 4 (lower is better)
Translates to: FDVSSSLADFMTARQGQHVILSC*FHDSKT
Trigger: TGTCTTGCTGTCATGAAATCAGCAAGAGAGGATGAC...ATGCTGCCCCTGTCTTGCTGTCATGAAATCAGCAAGAGAGGATGACACATCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR TCA 90 bp TTTGATGTGTCATCCTCTCTTGCTGATTTCATGACAGCAAGACAGGGGCAGCATAGAGCTGTAAGTGCTTaGATAGATGACTCAAGGCAG +
Preference number: 4 (lower is better)
Translates to: FDVSSSLADFMTARQGQHRAVSA*IDDSRQ
Trigger: CTGCCTTGAGTCATCTATTCAAGCACTTACAGCTCT...ATGCTGCCCCTGTCTTGCTGTCATGAAATCAGCAAGAGAGGATGACACATCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR TCA 90 bp AGTCACAACATCAAGAACTTTCAGCAAACACCTAAGCTTTGGTGTCATCAGCTGCCAAGCTTTGAGTACTaGCTGATCAGGGCTGTTAGG +
Preference number: 4 (lower is better)
Translates to: SHNIKNFQQTPKLWCHQLPSFEY*LIRAVR
Trigger: CCTAACAGCCCTGATCAGTCAGTACTCAAAGCTTGG...CAGCTGATGACACCAAAGCTTAGGTGTTTGCTGAAAGTTCTTGATGTTGTGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR GCA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAAGGATGCTCTCCACGTTaGACAGGGCAGGGTTGTTGC +
Preference number: 4 (lower is better)
Translates to: EIVERKCSFSGRLKSDSEGCSPR*TGQGCC
Trigger: GCAACAACCCTGCCCTGTGCAACGTGGAGAGCATCC...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR GCA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAAGCAGTTCTCCTCTCCTaGACCCCAGCAGCTCCCATT +
Preference number: 4 (lower is better)
Translates to: EIVERKCSFSGRLKSDSEAVLLS*TPAAPI
Trigger: AATGGGAGCTGCTGGGGTGCAGGAGAGGAGAACTGC...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR GCA 90 bp AAACACACTGCCTGCTACATAGTTTTTATCCCAGGTATAATTTGTGAGGAATGTCAGCGCCCGGAGCACTaGTGGGCACAGATGATTTTG +
Preference number: 4 (lower is better)
Translates to: KHTACYIVFIPGIICEECQRPEH*WAQMIL
Trigger: CAAAATCATCTGTGCCCAGCAGTGCTCCGGGCGCTG...ACATTCCTCACAAATTATACCTGGGATAAAAACTATGTAGCAGGCAGTGTGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR GCA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAACAGCGCCCGGAGCACTaGTGGGCACAGATGATTTTG +
Preference number: 4 (lower is better)
Translates to: EIVERKCSFSGRLKSDSEQRPEH*WAQMIL
Trigger: CAAAATCATCTGTGCCCAGCAGTGCTCCGGGCGCTG...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR GCA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAACTTCGTCTCGGAATTTaGGGCAGACCAGGCAGTCGC +
Preference number: 4 (lower is better)
Translates to: EIVERKCSFSGRLKSDSELRLGI*GRPGSR
Trigger: GCGACTGCCTGGTCTGCCGCAAATTCCGAGACGAAG...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR GCA 90 bp CCTCAAATTAGGAGATACGTTTTTGCGAGAACAAAAGCGGTGCTATCCTTAGGTCACCAAAGCTGTATTTaGCCTCGGGGTTCACATCCA +
Preference number: 4 (lower is better)
Translates to: PQIRRYVFARTKAVLSLGHQSCI*PRGSHP
Trigger: TGGATGTGAACCCCGAGGGCAAATACAGCTTTGGTG...ACCTAAGGATAGCACCGCTTTTGTTCTCGCAAAAACGTATCTCCTAATTTGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAAGGAGTCACCCCTAAATaGCACCGGCAGGATGTGGAG +
Preference number: 4 (lower is better)
Translates to: EIVERKCSFSGRLKSDSEGVTPK*HRQDVE
Trigger: CTCCACATCCTGCCGGTGGCATTTAGGGGTGACTCC...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR GCA 90 bp AAGATAGAGCCAGCAGAGAGAACAGGGATCAAATCTGTCACAAACACACACATACTGGGTGGCACTGTATaGACTCAGAGTTCTCCACAA +
Preference number: 4 (lower is better)
Translates to: KIEPAERTGIKSVTNTHILGGTV*TQSSPQ
Trigger: TTGTGGAGAACTCTGAGTGCATACAGTGCCACCCAG...TATGTGTGTGTTTGTGACAGATTTGATCCCTGTTCTCTCTGCTGGCTCTATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR GCA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAATTCTCCCATGACTCCTaGCGGGCAGGTCTTGACGCA +
Preference number: 4 (lower is better)
Translates to: EIVERKCSFSGRLKSDSEFSHDS*RAGLDA
Trigger: TGCGTCAAGACCTGCCCGGCAGGAGTCATGGGAGAA...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR GCA 90 bp GCTAGAAATTTTGCAGATTCATTCTTACAACAGAGGTACAGCAAACAACCAGACCAAGACCTGGCCCAGTaGATCCGTAGGTGCAGTTTG +
Preference number: 4 (lower is better)
Translates to: ARNFADSFLQQRYSKQPDQDLAQ*IRRCSL
Trigger: CAAACTGCACCTACGGATGCACTGGGCCAGGTCTTG...GTCTGGTTGTTTGCTGTACCTCTGTTGTAAGAATGAATCTGCAAAATTTCTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR GCA 90 bp ATTGGAATGACCTCAGGAGCTTTAAAAACTACGAATGCTTGGGTTTCAGCCCCAGTAGTTCATGCCCTTTaGGATCTGCACACACCAGTT +
Preference number: 4 (lower is better)
Translates to: IGMTSGALKTTNAWVSAPVVHAL*DLHTPV
Trigger: AACTGGTGTGTGCAGATCGCAAAGGGCATGAACTAC...TGGGGCTGAAACCCAAGCATTCGTAGTTTTTAAAGCTCCTGAGGTCATTCCAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR GCA 90 bp TTTGATGTGTCATCCTCTCTTGCTGATTTCATGACAGCAAGACAGGGGCAGCATGCCCATTTCTATCAATaGAAGCCACGGTGGAATTGT +
Preference number: 4 (lower is better)
Translates to: FDVSSSLADFMTARQGQHAHFYQ*KPRWNC
Trigger: ACAATTCCACCGTGGCTTGCATTGATAGAAATGGGC...ATGCTGCCCCTGTCTTGCTGTCATGAAATCAGCAAGAGAGGATGACACATCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp GTCAAGATAGAGCCAGCAGAGAGAACAGGGATCAAATCTGTCACAAACACACACGCCCATTTCTATCAATaGAAGCCACGGTGGAATTGT +
Preference number: 4 (lower is better)
Translates to: VKIEPAERTGIKSVTNTHAHFYQ*KPRWNC
Trigger: ACAATTCCACCGTGGCTTGCATTGATAGAAATGGGC...GTGTGTGTTTGTGACAGATTTGATCCCTGTTCTCTCTGCTGGCTCTATCTTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR GCA 90 bp CTTAGAGGGAGCAGGTTGTTTAGGGTGACTGACCTCAGCCTTATGTGGACTTTATATCCTCCGTGGTCATaGTCCAATAAATTCACTGCT +
Preference number: 4 (lower is better)
Translates to: LRGSRLFRVTDLSLMWTLYPPWS*SNKFTA
Trigger: AGCAGTGAATTTATTGGAGCATGACCACGGAGGATA...TAAAGTCCACATAAGGCTGAGGTCAGTCACCCTAAACAACCTGCTCCCTCTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR GCA 90 bp GTAAATGCTTCACAGTTTGAAGACAAAGGAATGCAACTTCCCAAAATGTGCCCGACTCAGGGTAGCAAGTaGTACCAGCAAGCTTCTTCC +
Preference number: 4 (lower is better)
Translates to: VNASQFEDKGMQLPKMCPTQGSK*YQQASS
Trigger: GGAAGAAGCTTGCTGGTAGCACTTGCTACCCTGAGT...CGGGCACATTTTGGGAAGTTGCATTCCTTTGTCTTCAAACTGTGAAGCATTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp AGTCTAAGGAAGAATTCCATCCCCTCCGTTTCTTCTTTGCCCAGGAAGGGACAGTTATCCTACTGTACCTaGCATGACTTGATACAGTAC +
Preference number: 4 (lower is better)
Translates to: SLRKNSIPSVSSLPRKGQLSYCT*HDLIQY
Trigger: GTACTGTATCAAGTCATGGCAGGTACAGTAGGATAA...CTGTCCCTTCCTGGGCAAAGAAGAAACGGAGGGGATGGAATTCTTCCTTAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp GTAAATGCTTCACAGTTTGAAGACAAAGGAATGCAACTTCCCAAAATGTGCCCGTTCGCACCTGTAAAATaGCCTGTTGTGGCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: VNASQFEDKGMQLPKMCPFAPVK*PVVARA
Trigger: AGCTCTGGCCACAACAGGGCATTTTACAGGTGCGAA...CGGGCACATTTTGGGAAGTTGCATTCCTTTGTCTTCAAACTGTGAAGCATTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp TGCAACTTCCCAAAATGTGCCCGAGGTGGAAGTACTTCCTGGCTAGTCGGTGTATTCTCACTAAGCATGTaGAGAGATGATAGCTCAAAA +
Preference number: 4 (lower is better)
Translates to: CNFPKCARGGSTSWLVGVFSLSM*RDDSSK
Trigger: TTTTGAGCTATCATCTCTGCACATGCTTAGTGAGAA...TACACCGACTAGCCAGGAAGTACTTCCACCTCGGGCACATTTTGGGAAGTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR GCA 90 bp AGTCACAACATCAAGAACTTTCAGCAAACACCTAAGCTTTGGTGTCATCAGCTGTACCAGACAGAACTGTaGCTCCCTGGACAGATGAAG +
Preference number: 4 (lower is better)
Translates to: SHNIKNFQQTPKLWCHQLYQTEL*LPGQMK
Trigger: CTTCATCTGTCCAGGGAGGCACAGTTCTGTCTGGTA...CAGCTGATGACACCAAAGCTTAGGTGTTTGCTGAAAGTTCTTGATGTTGTGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR GCA 90 bp TTCTGCTCAAAGGGACAATATTCTTGCTGGATGCGTTTCTGTAAATGCTTCACATGGAGTGCAATAGGATaGATCCACAGTGCTCCCCCT +
Preference number: 4 (lower is better)
Translates to: FCSKGQYSCWMRFCKCFTWSAIG*IHSAPP
Trigger: AGGGGGAGCACTGTGGATGCATCCTATTGCACTCCA...TGTGAAGCATTTACAGAAACGCATCCAGCAAGAATATTGTCCCTTTGAGCAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR GCA 90 bp GCAAACAACCAGACACAACAAAGAGCTTGTGCAGGCTCGGTCATGTGTTTATCTACAACAAAGAGCTTGTaGAGGCTCGGTCATGTGTTT +
Preference number: 4 (lower is better)
Translates to: ANNQTQQRACAGSVMCLSTTKSL*RLGHVF
Trigger: AAACACATGACCGAGCCTGCACAAGCTCTTTGTTGT...AGATAAACACATGACCGAGCCTGCACAAGCTCTTTGTTGTGTCTGGTTGTTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CCA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAATCTCCCGATCAATACTaGACGGAGTCAGGGGGCCGT +
Preference number: 4 (lower is better)
Translates to: EIVERKCSFSGRLKSDSESPDQY*TESGGR
Trigger: ACGGCCCCCTGACTCCGTCCAGTATTGATCGGGAGA...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR CCA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAATGGCAGCTGCCCAGGTaGTTCTGGAAGTCCATCGAC +
Preference number: 4 (lower is better)
Translates to: EIVERKCSFSGRLKSDSEWQLPR*FWKSID
Trigger: GTCGATGGACTTCCAGAACCACCTGGGCAGCTGCCA...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR CCA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAACGCCCGGAGCACTGCTaGGCACAGATGATTTTGGTC +
Preference number: 4 (lower is better)
Translates to: EIVERKCSFSGRLKSDSERPEHC*AQMILV
Trigger: GACCAAAATCATCTGTGCCCAGCAGTGCTCCGGGCG...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR CCA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAAGGCAGACCTGGCCTGTaGCCTTGCAGCTGTTTTCAC +
Preference number: 4 (lower is better)
Translates to: EIVERKCSFSGRLKSDSEGRPGL*PCSCFH
Trigger: GTGAAAACAGCTGCAAGGCCACAGGCCAGGTCTGCC...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR CCA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAACTGAGGCAGGCACTCTaGGTGGCACTGTATGCACTC +
Preference number: 4 (lower is better)
Translates to: EIVERKCSFSGRLKSDSELRQAL*VALYAL
Trigger: GAGTGCATACAGTGCCACCCAGAGTGCCTGCCTCAG...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR CCA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAATTTGGATGGCACAGGTaGCACACATGGCCGGCGTCT +
Preference number: 4 (lower is better)
Translates to: EIVERKCSFSGRLKSDSEFGWHR*HTWPAS
Trigger: AGACGCCGGCCATGTGTGCCACCTGTGCCATCCAAA...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR CCA 90 bp GCTAGAAATTTTGCAGATTCATTCTTACAACAGAGGTACAGCAAACAACCAGACACAGCCTTCAAGACCTaGCCCAGTGCATCCGTAGGT +
Preference number: 4 (lower is better)
Translates to: ARNFADSFLQQRYSKQPDTAFKT*PSASVG
Trigger: ACCTACGGATGCACTGGGCCAGGTCTTGAAGGCTGT...GTCTGGTTGTTTGCTGTACCTCTGTTGTAAGAATGAATCTGCAAAATTTCTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CCA 90 bp CTACCTGAATTCCACACTACTCATAATGCTACTGTCATTCGCACCTGTAAAATGCTTAGGCCCATTCGTTaGACAGCCTTCAAGACCTGG +
Preference number: 4 (lower is better)
Translates to: LPEFHTTHNATVIRTCKMLRPIR*TAFKTW
Trigger: CCAGGTCTTGAAGGCTGTCCAACGAATGGGCCTAAG...CATTTTACAGGTGCGAATGACAGTAGCATTATGAGTAGTGTGGAATTCAGGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp GTCAAGATAGAGCCAGCAGAGAGAACAGGGATCAAATCTGTCACAAACACACACCAGTTGAGCAGGTACTaGGAGCCAATATTGTCTTTG +
Preference number: 4 (lower is better)
Translates to: VKIEPAERTGIKSVTNTHQLSRY*EPILSL
Trigger: CAAAGACAATATTGGCTCCCAGTACCTGCTCAACTG...GTGTGTGTTTGTGACAGATTTGATCCCTGTTCTCTCTGCTGGCTCTATCTTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CCA 90 bp TTATTATTTGATGTGTCATCCTCTCTTGCTGATTTCATGACAGCAAGACAGGGGCATCGATGGTACATATaGGTGGCTGAGGGAGGCGTT +
Preference number: 4 (lower is better)
Translates to: LLFDVSSSLADFMTARQGHRWYI*VAEGGV
Trigger: AACGCCTCCCTCAGCCACCCATATGTACCATCGATG...CCCCTGTCTTGCTGTCATGAAATCAGCAAGAGAGGATGACACATCAAATAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp CCTCAAATTAGGAGATACGTTTTTGCGAGAACAAAAGCGGTGCTATCCTTAGGTTTGACACAGGTGGGCTaGACAGTGTTGAGATACTCG +
Preference number: 4 (lower is better)
Translates to: PQIRRYVFARTKAVLSLGLTQVG*TVLRYS
Trigger: CGAGTATCTCAACACTGTCCAGCCCACCTGTGTCAA...ACCTAAGGATAGCACCGCTTTTGTTCTCGCAAAAACGTATCTCCTAATTTGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp TTCTGCTCAAAGGGACAATATTCTTGCTGGATGCGTTTCTGTAAATGCTTCACATTGTCCAGGCTAATTTaGTGGCTGCCTTTCTGGGCC +
Preference number: 4 (lower is better)
Translates to: FCSKGQYSCWMRFCKCFTLSRLI*WLPFWA
Trigger: GGCCCAGAAAGGCAGCCACCAAATTAGCCTGGACAA...TGTGAAGCATTTACAGAAACGCATCCAGCAAGAATATTGTCCCTTTGAGCAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp CTACCTGAATTCCACACTACTCATAATGCTACTGTCATTCGCACCTGTAAAATGGCTGTGGCTTGGTCCTaGGTATCGAAAGAGTCTGGA +
Preference number: 4 (lower is better)
Translates to: LPEFHTTHNATVIRTCKMAVAWS*VSKESG
Trigger: TCCAGACTCTTTCGATACCCAGGACCAAGCCACAGC...CATTTTACAGGTGCGAATGACAGTAGCATTATGAGTAGTGTGGAATTCAGGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp AGTCTAAGGAAGAATTCCATCCCCTCCGTTTCTTCTTTGCCCAGGAAGGGACAGGGACAATATTCTTGCTaGATGCGTTTCTGTAAATGC +
Preference number: 4 (lower is better)
Translates to: SLRKNSIPSVSSLPRKGQGQYSC*MRFCKC
Trigger: GCATTTACAGAAACGCATCCAGCAAGAATATTGTCC...CTGTCCCTTCCTGGGCAAAGAAGAAACGGAGGGGATGGAATTCTTCCTTAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAACCCGTAGGTGCAGTTTaGATGGCACAGGTGGCACAC +
Preference number: 4 (lower is better)
Translates to: EIVERKCSFSGRLKSDSEPVGAV*MAQVAH
Trigger: GTGTGCCACCTGTGCCATCCAAACTGCACCTACGGG...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR TCA 90 bp CTACCTGAATTCCACACTACTCATAATGCTACTGTCATTCGCACCTGTAAAATGACTGCTGGGCACAGATaGTTTTGGTCAGTTTCTGGC +
Preference number: 4 (lower is better)
Translates to: LPEFHTTHNATVIRTCKMTAGHR*FWSVSG
Trigger: GCCAGAAACTGACCAAAATCATCTGTGCCCAGCAGT...CATTTTACAGGTGCGAATGACAGTAGCATTATGAGTAGTGTGGAATTCAGGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR TCA 90 bp CAAACAAGTCAGTCTAACGCTCATGACTGGAAACCACTGGTCCATCAGTGGGGAAAATGCTTCACAGTTTaGAGACAAAGGAATGCAACT +
Preference number: 4 (lower is better)
Translates to: QTSQSNAHDWKPLVHQWGKCFTV*RQRNAT
Trigger: AGTTGCATTCCTTTGTCTTCAAACTGTGAAGCATTT...TCCCCACTGATGGACCAGTGGTTTCCAGTCATGAGCGTTAGACTGACTTGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR TCA 90 bp ATTGGAATGACCTCAGGAGCTTTAAAAACTACGAATGCTTGGGTTTCAGCCCCAGGGCTCCTAACTAGCTaGATCTTCCAATCTTCCAAT +
Preference number: 4 (lower is better)
Translates to: IGMTSGALKTTNAWVSAPGLLTS*IFQSSN
Trigger: ATTGGAAGATTGGAAGATTCAGCTAGTTAGGAGCCC...TGGGGCTGAAACCCAAGCATTCGTAGTTTTTAAAGCTCCTGAGGTCATTCCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR TCA 90 bp TTATTATTTGATGTGTCATCCTCTCTTGCTGATTTCATGACAGCAAGACAGGGGGCAGGTTGTTTAGGGTaGCTGACCTCAGCCTTATGT +
Preference number: 4 (lower is better)
Translates to: LLFDVSSSLADFMTARQGAGCLG*LTSALC
Trigger: ACATAAGGCTGAGGTCAGTCACCCTAAACAACCTGC...CCCCTGTCTTGCTGTCATGAAATCAGCAAGAGAGGATGACACATCAAATAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR TCA 90 bp TTCTGCTCAAAGGGACAATATTCTTGCTGGATGCGTTTCTGTAAATGCTTCACATTATGTCTGCAGTTGTaGGGCAGGGGTGGTAAGTCA +
Preference number: 4 (lower is better)
Translates to: FCSKGQYSCWMRFCKCFTLCLQL*GRGGKS
Trigger: TGACTTACCACCCCTGCCTCACAACTGCAGACATAA...TGTGAAGCATTTACAGAAACGCATCCAGCAAGAATATTGTCCCTTTGAGCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR TCA 90 bp CACACTGCCTGCTACATAGTTTTTATCCCAGGTATAATTTGTGAGGAATGTATACACTGCAGCCAGGGCTaGATAACTTCTCTAGGGTGG +
Preference number: 4 (lower is better)
Translates to: HTACYIVFIPGIICEECIHCSQG*ITSLGW
Trigger: CCACCCTAGAGAAGTTATTCAGCCCTGGCTGCAGTG...TATACATTCCTCACAAATTATACCTGGGATAAAAACTATGTAGCAGGCAGTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR GCA 90 bp AGAGAGAACAGGGATCAAATCTGTCACAAACACACACATACACACACACACATACACCAAAGCTGTATTTaGCCTCGGGGTTCACATCCA +
Preference number: 4 (lower is better)
Translates to: RENRDQICHKHTHTHTHIHQSCI*PRGSHP
Trigger: TGGATGTGAACCCCGAGGGCAAATACAGCTTTGGTG...TATGTGTGTGTGTGTATGTGTGTGTTTGTGACAGATTTGATCCCTGTTCTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR GCA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAACGCACTTCTTACACTTaGGGACGCCGTCTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: EIVERKCSFSGRLKSDSERTSYT*GRRLPP
Trigger: TGGAGGAAGACGGCGTCCGCAAGTGTAAGAAGTGCG...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR GCA 90 bp CACACTGCCTGCTACATAGTTTTTATCCCAGGTATAATTTGTGAGGAATGTATACCTGGCCTGTGGCCTTaGAGCTGTTTTCACCTCTGT +
Preference number: 4 (lower is better)
Translates to: HTACYIVFIPGIICEECIPGLWP*SCFHLC
Trigger: ACAGAGGTGAAAACAGCTGCAAGGCCACAGGCCAGG...TATACATTCCTCACAAATTATACCTGGGATAAAAACTATGTAGCAGGCAGTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR GCA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAACCTGGCCTGTGGCCTTaGAGCTGTTTTCACCTCTGT +
Preference number: 4 (lower is better)
Translates to: EIVERKCSFSGRLKSDSEPGLWP*SCFHLC
Trigger: ACAGAGGTGAAAACAGCTGCAAGGCCACAGGCCAGG...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR GCA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAACACCCTCCAGAAGGTTaGACTTGTCCACGCATTCCC +
Preference number: 4 (lower is better)
Translates to: EIVERKCSFSGRLKSDSEHPPEG*TCPRIP
Trigger: GGGAATGCGTGGACAAGTGCAACCTTCTGGAGGGTG...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR GCA 90 bp GCTAGAAATTTTGCAGATTCATTCTTACAACAGAGGTACAGCAAACAACCAGACCAGTGCATCCGTAGGTaGAGTTTGGATGGCACAGGT +
Preference number: 4 (lower is better)
Translates to: ARNFADSFLQQRYSKQPDQCIRR*SLDGTG
Trigger: ACCTGTGCCATCCAAACTGCACCTACGGATGCACTG...GTCTGGTTGTTTGCTGTACCTCTGTTGTAAGAATGAATCTGCAAAATTTCTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR GCA 90 bp CCTCAAATTAGGAGATACGTTTTTGCGAGAACAAAAGCGGTGCTATCCTTAGGTGTAGTTCATGCCCTTTaGGATCTGCACACACCAGTT +
Preference number: 4 (lower is better)
Translates to: PQIRRYVFARTKAVLSLGVVHAL*DLHTPV
Trigger: AACTGGTGTGTGCAGATCGCAAAGGGCATGAACTAC...ACCTAAGGATAGCACCGCTTTTGTTCTCGCAAAAACGTATCTCCTAATTTGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp CCTCAAATTAGGAGATACGTTTTTGCGAGAACAAAAGCGGTGCTATCCTTAGGTGTGATCTTGACATGCTaGGGTGTTTTCACCAGTACG +
Preference number: 4 (lower is better)
Translates to: PQIRRYVFARTKAVLSLGVILTC*GVFTST
Trigger: CGTACTGGTGAAAACACCGCAGCATGTCAAGATCAC...ACCTAAGGATAGCACCGCTTTTGTTCTCGCAAAAACGTATCTCCTAATTTGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp GCAAACAACCAGACACAACAAAGAGCTTGTGCAGGCTCGGTCATGTGTTTATCTCACTTTGCCTCCTTCTaGATGGTATTCTTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: ANNQTQQRACAGSVMCLSHFASF*MVFFLF
Trigger: GAAGAGAAAGAATACCATGCAGAAGGAGGCAAAGTG...AGATAAACACATGACCGAGCCTGCACAAGCTCTTTGTTGTGTCTGGTTGTTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR GCA 90 bp AGTCACAACATCAAGAACTTTCAGCAAACACCTAAGCTTTGGTGTCATCAGCTGCTTTGGGCGACTATCTaGGTCTATCATCCAGCACTT +
Preference number: 4 (lower is better)
Translates to: SHNIKNFQQTPKLWCHQLLWATI*VYHPAL
Trigger: AAGTGCTGGATGATAGACGCAGATAGTCGCCCAAAG...CAGCTGATGACACCAAAGCTTAGGTGTTTGCTGAAAGTTCTTGATGTTGTGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR GCA 90 bp CTACCTGAATTCCACACTACTCATAATGCTACTGTCATTCGCACCTGTAAAATGGGAATTGTTGCTGGTTaGACTCAGAGAGCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: LPEFHTTHNATVIRTCKMGIVAG*TQRAQE
Trigger: CTCCTGAGCTCTCTGAGTGCAACCAGCAACAATTCC...CATTTTACAGGTGCGAATGACAGTAGCATTATGAGTAGTGTGGAATTCAGGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp AAGATAGAGCCAGCAGAGAGAACAGGGATCAAATCTGTCACAAACACACACATATCTGAGCTGTATCGCTaGAAGAAGCTGTCTTCCTTG +
Preference number: 4 (lower is better)
Translates to: KIEPAERTGIKSVTNTHISELYR*KKLSSL
Trigger: CAAGGAAGACAGCTTCTTGCAGCGATACAGCTCAGA...TATGTGTGTGTTTGTGACAGATTTGATCCCTGTTCTCTCTGCTGGCTCTATCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR GCA 90 bp CCTCAAATTAGGAGATACGTTTTTGCGAGAACAAAAGCGGTGCTATCCTTAGGTAGTCGGTGTAAACGTTaGAAAACCAGTCTGTGGGTC +
Preference number: 4 (lower is better)
Translates to: PQIRRYVFARTKAVLSLGSRCKR*KTSLWV
Trigger: GACCCACAGACTGGTTTTGCAACGTTTACACCGACT...ACCTAAGGATAGCACCGCTTTTGTTCTCGCAAAAACGTATCTCCTAATTTGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp CCTCAAATTAGGAGATACGTTTTTGCGAGAACAAAAGCGGTGCTATCCTTAGGTCAACTTCCCAAAATGTaGCCGAGGTGGAAGTACTTC +
Preference number: 4 (lower is better)
Translates to: PQIRRYVFARTKAVLSLGQLPKM*PRWKYF
Trigger: GAAGTACTTCCACCTCGGGCACATTTTGGGAAGTTG...ACCTAAGGATAGCACCGCTTTTGTTCTCGCAAAAACGTATCTCCTAATTTGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp CCCTTTCCATTAACACTGCCCCAACAGAACCTGCCTCAGACCAAGCTAAATGTGAAGGGACAATATTCTTaGTGGATGCGTTTCTGTAAA +
Preference number: 4 (lower is better)
Translates to: PFPLTLPQQNLPQTKLNVKGQYS*WMRFCK
Trigger: TTTACAGAAACGCATCCAGCAAGAATATTGTCCCTT...CACATTTAGCTTGGTCTGAGGCAGGTTCTGTTGGGGCAGTGTTAATGGAAAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR GCA 90 bp AAACACACTGCCTGCTACATAGTTTTTATCCCAGGTATAATTTGTGAGGAATGTGTGGCTTGTGCTCCTTaGTCACAGTTGGGCCTGGAT +
Preference number: 4 (lower is better)
Translates to: KHTACYIVFIPGIICEECVACAP*SQLGLD
Trigger: ATCCAGGCCCAACTGTGAGCAAGGAGCACAAGCCAC...ACATTCCTCACAAATTATACCTGGGATAAAAACTATGTAGCAGGCAGTGTGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR GCA 90 bp TTATTATTTGATGTGTCATCCTCTCTTGCTGATTTCATGACAGCAAGACAGGGGTTCGCACCTGTAAAATaGCCTGTTGTGGCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: LLFDVSSSLADFMTARQGFAPVK*PVVARA
Trigger: AGCTCTGGCCACAACAGGGCATTTTACAGGTGCGAA...CCCCTGTCTTGCTGTCATGAAATCAGCAAGAGAGGATGACACATCAAATAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp AGTCTAAGGAAGAATTCCATCCCCTCCGTTTCTTCTTTGCCCAGGAAGGGACAGGGAAGGAAAACACACTaGCTGCTACATAGTTTTTAT +
Preference number: 4 (lower is better)
Translates to: SLRKNSIPSVSSLPRKGQGRKTH*LLHSFY
Trigger: ATAAAAACTATGTAGCAGGCAGTGTGTTTTCCTTCC...CTGTCCCTTCCTGGGCAAAGAAGAAACGGAGGGGATGGAATTCTTCCTTAGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CCA 90 bp CAAACAACCAGACACAACAAAGAGCTTGTGCAGGCTCGGTCATGTGTTTATCTGTTGTTACTCGTGCCTTaGCAAACTTTCTTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: QTTRHNKELVQARSCVYLLLLVP*QTFFSS
Trigger: GGAGGAAAAGAAAGTTTGCCAAGGCACGAGTAACAA...CAGATAAACACATGACCGAGCCTGCACAAGCTCTTTGTTGTGTCTGGTTGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CCA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAAACTATGTCCCGCCACTaGATGCTCTCCACGTTGCAC +
Preference number: 4 (lower is better)
Translates to: EIVERKCSFSGRLKSDSETMSRH*MLSTLH
Trigger: GTGCAACGTGGAGAGCATCCAGTGGCGGGACATAGT...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR CCA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAACCCAGCAGCTCCCATTaGGACAGCTTGGATCACACT +
Preference number: 4 (lower is better)
Translates to: EIVERKCSFSGRLKSDSEPSSSH*DSLDHT
Trigger: AGTGTGATCCAAGCTGTCCCAATGGGAGCTGCTGGG...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR CCA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAAGTTGTAGAGCATGAGTaGGGGGCAGGTGTCCTTGCA +
Preference number: 4 (lower is better)
Translates to: EIVERKCSFSGRLKSDSEVVEHE*GAGVLA
Trigger: TGCAAGGACACCTGCCCCCCACTCATGCTCTACAAC...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR CCA 90 bp ACACAGATGTACACACATCATGAACACTCACACACACAGATGTGTATGTCCGTGAATATCCAGTTCCTGTaGATCCAGAGGAGGAGTATG +
Preference number: 4 (lower is better)
Translates to: TQMYTHHEHSHTQMCMSVNIQFL*IQRRSM
Trigger: CATACTCCTCCTCTGGATCCACAGGAACTGGATATT...CACGGACATACACATCTGTGTGTGTGAGTGTTCATGATGTGTGTACATCTGTGT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CCA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAACTGGATACAGTTGTCTaGTCCCCGTCCTGTGCAGGT +
Preference number: 4 (lower is better)
Translates to: EIVERKCSFSGRLKSDSELDTVV*SPSCAG
Trigger: ACCTGCACAGGACGGGGACCAGACAACTGTATCCAG...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR CCA 90 bp TTTGATGTGTCATCCTCTCTTGCTGATTTCATGACAGCAAGACAGGGGCAGCATTTCCGTCATATGGCTTaGATCCAAAGGTCATCAACT +
Preference number: 4 (lower is better)
Translates to: FDVSSSLADFMTARQGQHFRHMA*IQRSST
Trigger: AGTTGATGACCTTTGGATCCAAGCCATATGACGGAA...ATGCTGCCCCTGTCTTGCTGTCATGAAATCAGCAAGAGAGGATGACACATCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp GCAAACAACCAGACACAACAAAGAGCTTGTGCAGGCTCGGTCATGTGTTTATCTGGAGTCTGTAGGACTTaGCAAATGCATTCTTTCATC +
Preference number: 4 (lower is better)
Translates to: ANNQTQQRACAGSVMCLSGVCRT*QMHSFI
Trigger: GATGAAAGAATGCATTTGCCAAGTCCTACAGACTCC...AGATAAACACATGACCGAGCCTGCACAAGCTCTTTGTTGTGTCTGGTTGTTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CCA 90 bp CTACCTGAATTCCACACTACTCATAATGCTACTGTCATTCGCACCTGTAAAATGTTGACACAGGTGGGCTaGACAGTGTTGAGATACTCG +
Preference number: 4 (lower is better)
Translates to: LPEFHTTHNATVIRTCKMLTQVG*TVLRYS
Trigger: CGAGTATCTCAACACTGTCCAGCCCACCTGTGTCAA...CATTTTACAGGTGCGAATGACAGTAGCATTATGAGTAGTGTGGAATTCAGGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp ATAACTTACTTAGAGAATGCAGAGGGTCCCAGGGCGTTTTCAAAGCTCAGGTGGGGTATCGAAAGAGTCTaGATTTTTAGGGCTCATACT +
Preference number: 4 (lower is better)
Translates to: ITYLENAEGPRAFSKLRWGIERV*IFRAHT
Trigger: AGTATGAGCCCTAAAAATCCAGACTCTTTCGATACC...CCACCTGAGCTTTGAAAACGCCCTGGGACCCTCTGCATTCTCTAAGTAAGTTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CCA 90 bp GTAAATGCTTCACAGTTTGAAGACAAAGGAATGCAACTTCCCAAAATGTGCCCGTCTAACGCTCATGACTaGAAACCACTGGTCCATCAG +
Preference number: 4 (lower is better)
Translates to: VNASQFEDKGMQLPKMCPSNAHD*KPLVHQ
Trigger: CTGATGGACCAGTGGTTTCCAGTCATGAGCGTTAGA...CGGGCACATTTTGGGAAGTTGCATTCCTTTGTCTTCAAACTGTGAAGCATTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp CTTAGAGGGAGCAGGTTGTTTAGGGTGACTGACCTCAGCCTTATGTGGACTTTAGAATCCAATGTGGGCTaGAATCCGAGTTATTATTTG +
Preference number: 4 (lower is better)
Translates to: LRGSRLFRVTDLSLMWTLESNVG*NPSYYL
Trigger: CAAATAATAACTCGGATTCCAGCCCACATTGGATTC...TAAAGTCCACATAAGGCTGAGGTCAGTCACCCTAAACAACCTGCTCCCTCTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CCA 90 bp CCTCAAATTAGGAGATACGTTTTTGCGAGAACAAAAGCGGTGCTATCCTTAGGTCCACATTCTCAGCTGTaGGCTATTGGTCCAAATGCT +
Preference number: 4 (lower is better)
Translates to: PQIRRYVFARTKAVLSLGPHSQL*AIGPNA
Trigger: AGCATTTGGACCAATAGCCCACAGCTGAGAATGTGG...ACCTAAGGATAGCACCGCTTTTGTTCTCGCAAAAACGTATCTCCTAATTTGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp CTACCTGAATTCCACACTACTCATAATGCTACTGTCATTCGCACCTGTAAAATGTGGGGGCAGCTGACCTaGAGGGAACATATACTCTTT +
Preference number: 4 (lower is better)
Translates to: LPEFHTTHNATVIRTCKMWGQLT*REHILF
Trigger: AAAGAGTATATGTTCCCTCCAGGTCAGCTGCCCCCA...CATTTTACAGGTGCGAATGACAGTAGCATTATGAGTAGTGTGGAATTCAGGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp TTCTGCTCAAAGGGACAATATTCTTGCTGGATGCGTTTCTGTAAATGCTTCACATGGGGGCAGCTGACCTaGAGGGAACATATACTCTTT +
Preference number: 4 (lower is better)
Translates to: FCSKGQYSCWMRFCKCFTWGQLT*REHILF
Trigger: AAAGAGTATATGTTCCCTCCAGGTCAGCTGCCCCCA...TGTGAAGCATTTACAGAAACGCATCCAGCAAGAATATTGTCCCTTTGAGCAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp CCCTTTCCATTAACACTGCCCCAACAGAACCTGCCTCAGACCAAGCTAAATGTGTCTTCCTTGATAAATTaGATGGGGTGGATATTGACT +
Preference number: 4 (lower is better)
Translates to: PFPLTLPQQNLPQTKLNVSSLIN*MGWILT
Trigger: AGTCAATATCCACCCCATCCAATTTATCAAGGAAGA...CACATTTAGCTTGGTCTGAGGCAGGTTCTGTTGGGGCAGTGTTAATGGAAAGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CCA 90 bp TTCTGCTCAAAGGGACAATATTCTTGCTGGATGCGTTTCTGTAAATGCTTCACAAAAATCATGGGACTTTaGGCAGCTCCTCTCCTGACC +
Preference number: 4 (lower is better)
Translates to: FCSKGQYSCWMRFCKCFTKIMGL*AAPLLT
Trigger: GGTCAGGAGAGGAGCTGCCCAAAGTCCCATGATTTT...TGTGAAGCATTTACAGAAACGCATCCAGCAAGAATATTGTCCCTTTGAGCAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CCA 90 bp AGTCACAACATCAAGAACTTTCAGCAAACACCTAAGCTTTGGTGTCATCAGCTGCTCCCCCTTACAACCTaGACTCACAGCGAATATAGA +
Preference number: 4 (lower is better)
Translates to: SHNIKNFQQTPKLWCHQLLPLTT*THSEYR
Trigger: TCTATATTCGCTGTGAGTCCAGGTTGTAAGGGGGAG...CAGCTGATGACACCAAAGCTTAGGTGTTTGCTGAAAGTTCTTGATGTTGTGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CCA 90 bp GTAAATGCTTCACAGTTTGAAGACAAAGGAATGCAACTTCCCAAAATGTGCCCGAGATTTGGGTTGAATTaGTCTGCAGAGACTCCAGGC +
Preference number: 4 (lower is better)
Translates to: VNASQFEDKGMQLPKMCPRFGLN*SAETPG
Trigger: GCCTGGAGTCTCTGCAGACCAATTCAACCCAAATCT...CGGGCACATTTTGGGAAGTTGCATTCCTTTGTCTTCAAACTGTGAAGCATTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
3UTR CAA 72 bp TGGAATGACCTCAGGAGCTTTAAAAACTACGAATGCTaGGGTTTCAGCCCCAGAGATTTGCGTTTAATCGGT +
Preference number: 4 (lower is better)
Translates to: WNDLRSFKNYEC*GFSPRDLRLIG
Trigger: ACCGATTAAACGCAAATCTCTGGGGCTGAAACCCAAGCATTCGTAGTTTTTAAAGCTCCTGAGGTCATTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR TCA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAAAAGTGCCCAACTGCGTaGGCTTGTTACTCGTGCCTT +
Preference number: 4 (lower is better)
Translates to: EIVERKCSFSGRLKSDSEKCPTA*ACYSCL
Trigger: AAGGCACGAGTAACAAGCTCACGCAGTTGGGCACTT...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR TCA 90 bp GTAAATGCTTCACAGTTTGAAGACAAAGGAATGCAACTTCCCAAAATGTGCCCGTGGAGGCTGAGAAAATaGTCTTCAAAAGTGCCCAAC +
Preference number: 4 (lower is better)
Translates to: VNASQFEDKGMQLPKMCPWRLRK*SSKVPN
Trigger: GTTGGGCACTTTTGAAGATCATTTTCTCAGCCTCCA...CGGGCACATTTTGGGAAGTTGCATTCCTTTGTCTTCAAACTGTGAAGCATTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR TCA 90 bp CTACCTGAATTCCACACTACTCATAATGCTACTGTCATTCGCACCTGTAAAATGACTGCAAGAGAAAACTaGCCATGTTGCTTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: LPEFHTTHNATVIRTCKMTAREN*PCCLVL
Trigger: CAGGACCAAGCAACATGGTCAGTTTTCTCTTGCAGT...CATTTTACAGGTGCGAATGACAGTAGCATTATGAGTAGTGTGGAATTCAGGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR TCA 90 bp GCTAGAAATTTTGCAGATTCATTCTTACAACAGAGGTACAGCAAACAACCAGACCATCACTTATCTCCTTaGGGGAGCGTAATCCCAAGG +
Preference number: 4 (lower is better)
Translates to: ARNFADSFLQQRYSKQPDHHLSP*GSVIPR
Trigger: CCTTGGGATTACGCTCCCTCAAGGAGATAAGTGATG...GTCTGGTTGTTTGCTGTACCTCTGTTGTAAGAATGAATCTGCAAAATTTCTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR TCA 90 bp TTTGATGTGTCATCCTCTCTTGCTGATTTCATGACAGCAAGACAGGGGCAGCATTTTTGGAGAATTCGATaGTCAACTCACGGAACTTTG +
Preference number: 4 (lower is better)
Translates to: FDVSSSLADFMTARQGQHFWRIR*STHGTL
Trigger: CAAAGTTCCGTGAGTTGATCATCGAATTCTCCAAAA...ATGCTGCCCCTGTCTTGCTGTCATGAAATCAGCAAGAGAGGATGACACATCAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR TCA 90 bp CTACCTGAATTCCACACTACTCATAATGCTACTGTCATTCGCACCTGTAAAATGCTACTGTACCTGCCATaGCTTGATACAGTACCGATC +
Preference number: 4 (lower is better)
Translates to: LPEFHTTHNATVIRTCKMLLYLP*LDTVPI
Trigger: GATCGGTACTGTATCAAGTCATGGCAGGTACAGTAG...CATTTTACAGGTGCGAATGACAGTAGCATTATGAGTAGTGTGGAATTCAGGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR TCA 90 bp GTAAATGCTTCACAGTTTGAAGACAAAGGAATGCAACTTCCCAAAATGTGCCCGGTCATCCTCTCTTGCTaGTTTCATGACAGCAAGACA +
Preference number: 4 (lower is better)
Translates to: VNASQFEDKGMQLPKMCPVILSC*FHDSKT
Trigger: TGTCTTGCTGTCATGAAATCAGCAAGAGAGGATGAC...CGGGCACATTTTGGGAAGTTGCATTCCTTTGTCTTCAAACTGTGAAGCATTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR TCA 90 bp CCTCAAATTAGGAGATACGTTTTTGCGAGAACAAAAGCGGTGCTATCCTTAGGTTGTAGGGGCTCTGACTaGTCTGGGAGTCAAAAATTA +
Preference number: 4 (lower is better)
Translates to: PQIRRYVFARTKAVLSLGCRGSD*SGSQKL
Trigger: TAATTTTTGACTCCCAGATCAGTCAGAGCCCCTACA...ACCTAAGGATAGCACCGCTTTTGTTCTCGCAAAAACGTATCTCCTAATTTGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR TCA 90 bp ATTGGAATGACCTCAGGAGCTTTAAAAACTACGAATGCTTGGGTTTCAGCCCCATTCTTGACACATAAGTaGCAGCAGAATGTAGGTCCT +
Preference number: 4 (lower is better)
Translates to: IGMTSGALKTTNAWVSAPFLTHK*QQNVGP
Trigger: AGGACCTACATTCTGCTGTCACTTATGTGTCAAGAA...TGGGGCTGAAACCCAAGCATTCGTAGTTTTTAAAGCTCCTGAGGTCATTCCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR TCA 90 bp CCTCAAATTAGGAGATACGTTTTTGCGAGAACAAAAGCGGTGCTATCCTTAGGTCCTGGACAGATGAAGTaGGAACTATTTTGGGAAGCA +
Preference number: 4 (lower is better)
Translates to: PQIRRYVFARTKAVLSLGPGQMK*ELFWEA
Trigger: TGCTTCCCAAAATAGTTCTCACTTCATCTGTCCAGG...ACCTAAGGATAGCACCGCTTTTGTTCTCGCAAAAACGTATCTCCTAATTTGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR TCA 90 bp TTATTATTTGATGTGTCATCCTCTCTTGCTGATTTCATGACAGCAAGACAGGGGGCTTTGAGTACTGACTaGTCAGGGCTGTTAGGTGAA +
Preference number: 4 (lower is better)
Translates to: LLFDVSSSLADFMTARQGALSTD*SGLLGE
Trigger: TTCACCTAACAGCCCTGATCAGTCAGTACTCAAAGC...CCCCTGTCTTGCTGTCATGAAATCAGCAAGAGAGGATGACACATCAAATAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR GCA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAACACACTTTTGGCAGCTaGCCAGGTGGTTCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: EIVERKCSFSGRLKSDSEHTFGS*PGGSGS
Trigger: ACTTCCAGAACCACCTGGGCAGCTGCCAAAAGTGTG...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR GCA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAATTCCGTTACACACTTTaGGGCAAGGCCCTTCGCACT +
Preference number: 4 (lower is better)
Translates to: EIVERKCSFSGRLKSDSEFRYTL*GKALRT
Trigger: AGTGCGAAGGGCCTTGCCGCAAAGTGTGTAACGGAA...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR GCA 90 bp AGAGAGAACAGGGATCAAATCTGTCACAAACACACACATACACACACACACATAGTAGTTCATGCCCTTTaGGATCTGCACACACCAGTT +
Preference number: 4 (lower is better)
Translates to: RENRDQICHKHTHTHTHIVVHAL*DLHTPV
Trigger: AACTGGTGTGTGCAGATCGCAAAGGGCATGAACTAC...TATGTGTGTGTGTGTATGTGTGTGTTTGTGACAGATTTGATCCCTGTTCTCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR GCA 90 bp GTAAATGCTTCACAGTTTGAAGACAAAGGAATGCAACTTCCCAAAATGTGCCCGTCTGTGATCTTGACATaGTGCGGTGTTTTCACCAGT +
Preference number: 4 (lower is better)
Translates to: VNASQFEDKGMQLPKMCPSVILT*CGVFTS
Trigger: ACTGGTGAAAACACCGCAGCATGTCAAGATCACAGA...CGGGCACATTTTGGGAAGTTGCATTCCTTTGTCTTCAAACTGTGAAGCATTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp AAGATAGAGCCAGCAGAGAGAACAGGGATCAAATCTGTCACAAACACACACATATCTGTGATCTTGACATaGTGCGGTGTTTTCACCAGT +
Preference number: 4 (lower is better)
Translates to: KIEPAERTGIKSVTNTHISVILT*CGVFTS
Trigger: ACTGGTGAAAACACCGCAGCATGTCAAGATCACAGA...TATGTGTGTGTTTGTGACAGATTTGATCCCTGTTCTCTCTGCTGGCTCTATCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR GCA 90 bp CCTCAAATTAGGAGATACGTTTTTGCGAGAACAAAAGCGGTGCTATCCTTAGGTGCCCATTTCTATCAATaGAAGCCACGGTGGAATTGT +
Preference number: 4 (lower is better)
Translates to: PQIRRYVFARTKAVLSLGAHFYQ*KPRWNC
Trigger: ACAATTCCACCGTGGCTTGCATTGATAGAAATGGGC...ACCTAAGGATAGCACCGCTTTTGTTCTCGCAAAAACGTATCTCCTAATTTGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp TTCTGCTCAAAGGGACAATATTCTTGCTGGATGCGTTTCTGTAAATGCTTCACACAACTTCCCAAAATGTaGCCGAGGTGGAAGTACTTC +
Preference number: 4 (lower is better)
Translates to: FCSKGQYSCWMRFCKCFTQLPKM*PRWKYF
Trigger: GAAGTACTTCCACCTCGGGCACATTTTGGGAAGTTG...TGTGAAGCATTTACAGAAACGCATCCAGCAAGAATATTGTCCCTTTGAGCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp GCTAGAAATTTTGCAGATTCATTCTTACAACAGAGGTACAGCAAACAACCAGACGCCCTTCACTGTGTCTaGAAATCTGCCACTGTTTCC +
Preference number: 4 (lower is better)
Translates to: ARNFADSFLQQRYSKQPDALHCV*KSATVS
Trigger: GGAAACAGTGGCAGATTTGCAGACACAGTGAAGGGC...GTCTGGTTGTTTGCTGTACCTCTGTTGTAAGAATGAATCTGCAAAATTTCTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CCA 90 bp AAGATAGAGCCAGCAGAGAGAACAGGGATCAAATCTGTCACAAACACACACATACAGCCACCTCCTGGATaGTCTTTAAGAAGGAAAGAT +
Preference number: 4 (lower is better)
Translates to: KIEPAERTGIKSVTNTHIQPPPG*SLRRKD
Trigger: ATCTTTCCTTCTTAAAGACCATCCAGGAGGTGGCTG...TATGTGTGTGTTTGTGACAGATTTGATCCCTGTTCTCTCTGCTGGCTCTATCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CCA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAACTGCCCAGGTGGTTCTaGAAGTCCATCGACATGTTG +
Preference number: 4 (lower is better)
Translates to: EIVERKCSFSGRLKSDSELPRWF*KSIDML
Trigger: CAACATGTCGATGGACTTCCAGAACCACCTGGGCAG...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR CCA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAACTTGGATCACACTTTTaGCAGCTGCCCAGGTGGTTC +
Preference number: 4 (lower is better)
Translates to: EIVERKCSFSGRLKSDSELGSHF*QLPRWF
Trigger: GAACCACCTGGGCAGCTGCCAAAAGTGTGATCCAAG...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR CCA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAAAGGTGTCCTTGCACGTaGCTTCGTCTCGGAATTTGC +
Preference number: 4 (lower is better)
Translates to: EIVERKCSFSGRLKSDSERCPCT*LRLGIC
Trigger: GCAAATTCCGAGACGAAGCCACGTGCAAGGACACCT...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR CCA 90 bp TTATTATTTGATGTGTCATCCTCTCTTGCTGATTTCATGACAGCAAGACAGGGGAGGTTCTCAAAGGCATaGAGGTCCGTCCTGTTTTCA +
Preference number: 4 (lower is better)
Translates to: LLFDVSSSLADFMTARQGRFSKA*RSVLFS
Trigger: TGAAAACAGGACGGACCTCCATGCCTTTGAGAACCT...CCCCTGTCTTGCTGTCATGAAATCAGCAAGAGAGGATGACACATCAAATAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAACTCCACAAACTCCCTTaGCTCACCCTCCAGAAGGTT +
Preference number: 4 (lower is better)
Translates to: EIVERKCSFSGRLKSDSELHKLP*LTLQKV
Trigger: AACCTTCTGGAGGGTGAGCCAAGGGAGTTTGTGGAG...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR CCA 90 bp ACACAGATGTACACACATCATGAACACTCACACACACAGATGTGTATGTCCGTGTTCCGTCATATGGCTTaGATCCAAAGGTCATCAACT +
Preference number: 4 (lower is better)
Translates to: TQMYTHHEHSHTQMCMSVFRHMA*IQRSST
Trigger: AGTTGATGACCTTTGGATCCAAGCCATATGACGGAA...CACGGACATACACATCTGTGTGTGTGAGTGTTCATGATGTGTGTACATCTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CCA 90 bp GTAAATGCTTCACAGTTTGAAGACAAAGGAATGCAACTTCCCAAAATGTGCCCGTATGTATTCAGGCACTaGGAGGAAGGTGTCGTCTAT +
Preference number: 4 (lower is better)
Translates to: VNASQFEDKGMQLPKMCPYVFRH*EEGVVY
Trigger: ATAGACGACACCTTCCTCCCAGTGCCTGAATACATA...CGGGCACATTTTGGGAAGTTGCATTCCTTTGTCTTCAAACTGTGAAGCATTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp CACACTGCCTGCTACATAGTTTTTATCCCAGGTATAATTTGTGAGGAATGTATACCTCTGGAAGACTTGTaGCTTGTGCTCCTTGCTCAC +
Preference number: 4 (lower is better)
Translates to: HTACYIVFIPGIICEECIPLEDL*LVLLAH
Trigger: GTGAGCAAGGAGCACAAGCCACAAGTCTTCCAGAGG...TATACATTCCTCACAAATTATACCTGGGATAAAAACTATGTAGCAGGCAGTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CCA 90 bp CTACCTGAATTCCACACTACTCATAATGCTACTGTCATTCGCACCTGTAAAATGAGAACTGTGCCTCCCTaGACAGATGAAGTGAGAACT +
Preference number: 4 (lower is better)
Translates to: LPEFHTTHNATVIRTCKMRTVPP*TDEVRT
Trigger: AGTTCTCACTTCATCTGTCCAGGGAGGCACAGTTCT...CATTTTACAGGTGCGAATGACAGTAGCATTATGAGTAGTGTGGAATTCAGGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR TCA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAAACTGCTGGGCACAGATaGTTTTGGTCAGTTTCTGGC +
Preference number: 4 (lower is better)
Translates to: EIVERKCSFSGRLKSDSETAGHR*FWSVSG
Trigger: GCCAGAAACTGACCAAAATCATCTGTGCCCAGCAGT...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR TCA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAATGGTCCTGCCGCGTATaGTTTCTAGGTTCTCAAAGG +
Preference number: 4 (lower is better)
Translates to: EIVERKCSFSGRLKSDSEWSCRV*FLGSQR
Trigger: CCTTTGAGAACCTAGAAATCATACGCGGCAGGACCA...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR TCA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAACATCACTTATCTCCTTaGGGGAGCGTAATCCCAAGG +
Preference number: 4 (lower is better)
Translates to: EIVERKCSFSGRLKSDSEHHLSP*GSVIPR
Trigger: CCTTGGGATTACGCTCCCTCAAGGAGATAAGTGATG...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR TCA 90 bp GTAAATGCTTCACAGTTTGAAGACAAAGGAATGCAACTTCCCAAAATGTGCCCGATAATTTTGGTTTTCTaGCCGGAGGTCCCAAACAGT +
Preference number: 4 (lower is better)
Translates to: VNASQFEDKGMQLPKMCPIILVF*PEVPNS
Trigger: ACTGTTTGGGACCTCCGGTCAGAAAACCAAAATTAT...CGGGCACATTTTGGGAAGTTGCATTCCTTTGTCTTCAAACTGTGAAGCATTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR TCA 90 bp GTAAATGCTTCACAGTTTGAAGACAAAGGAATGCAACTTCCCAAAATGTGCCCGATTTTTGTAGTCTTCTaGTCTATGCCCCAAAGGACC +
Preference number: 4 (lower is better)
Translates to: VNASQFEDKGMQLPKMCPIFVVF*SMPQRT
Trigger: GGTCCTTTGGGGCATAGATCAGAAGACTACAAAAAT...CGGGCACATTTTGGGAAGTTGCATTCCTTTGTCTTCAAACTGTGAAGCATTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR TCA 90 bp AAACACACTGCCTGCTACATAGTTTTTATCCCAGGTATAATTTGTGAGGAATGTGAGACACTTTTTGTGTaGCAAAGCGTAAGGAGGGGG +
Preference number: 4 (lower is better)
Translates to: KHTACYIVFIPGIICEECETLFV*QSVRRG
Trigger: CCCCCTCCTTACGCTTTGTCACACAAAAAGTGTCTC...ACATTCCTCACAAATTATACCTGGGATAAAAACTATGTAGCAGGCAGTGTGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR TCA 90 bp CACACTGCCTGCTACATAGTTTTTATCCCAGGTATAATTTGTGAGGAATGTATACTTCCAGGAACTGACTaGGGAAGAAACAGCCAATGG +
Preference number: 4 (lower is better)
Translates to: HTACYIVFIPGIICEECILPGTD*GRNSQW
Trigger: CCATTGGCTGTTTCTTCCTCAGTCAGTTCCTGGAAG...TATACATTCCTCACAAATTATACCTGGGATAAAAACTATGTAGCAGGCAGTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR TCA 90 bp CTACCTGAATTCCACACTACTCATAATGCTACTGTCATTCGCACCTGTAAAATGATGCAGAGTAGACATTaGGGGCAATTTCAACAGGTG +
Preference number: 4 (lower is better)
Translates to: LPEFHTTHNATVIRTCKMMQSRH*GQFQQV
Trigger: CACCTGTTGAAATTGCCCTCAATGTCTACTCTGCAT...CATTTTACAGGTGCGAATGACAGTAGCATTATGAGTAGTGTGGAATTCAGGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR TCA 90 bp CACACTGCCTGCTACATAGTTTTTATCCCAGGTATAATTTGTGAGGAATGTATACTCTGTTCAGGTTCTTaGCTCTCAGCGACAGATGTG +
Preference number: 4 (lower is better)
Translates to: HTACYIVFIPGIICEECILCSGS*LSATDV
Trigger: CACATCTGTCGCTGAGAGTCAAGAACCTGAACAGAG...TATACATTCCTCACAAATTATACCTGGGATAAAAACTATGTAGCAGGCAGTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR GCA 90 bp GCTAGAAATTTTGCAGATTCATTCTTACAACAGAGGTACAGCAAACAACCAGACTCAAAAGTGCCCAACTaGGTGAGCTTGTTACTCGTG +
Preference number: 4 (lower is better)
Translates to: ARNFADSFLQQRYSKQPDSKVPN*VSLLLV
Trigger: CACGAGTAACAAGCTCACGCAGTTGGGCACTTTTGA...GTCTGGTTGTTTGCTGTACCTCTGTTGTAAGAATGAATCTGCAAAATTTCTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR GCA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAACACCAAAGCTGTATTTaGCCTCGGGGTTCACATCCA +
Preference number: 4 (lower is better)
Translates to: EIVERKCSFSGRLKSDSEHQSCI*PRGSHP
Trigger: TGGATGTGAACCCCGAGGGCAAATACAGCTTTGGTG...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR GCA 90 bp GCTAGAAATTTTGCAGATTCATTCTTACAACAGAGGTACAGCAAACAACCAGACGTTCAGGCTGACGACTaGAAGAGAAAACTGACCATG +
Preference number: 4 (lower is better)
Translates to: ARNFADSFLQQRYSKQPDVQADD*KRKLTM
Trigger: CATGGTCAGTTTTCTCTTGCAGTCGTCAGCCTGAAC...GTCTGGTTGTTTGCTGTACCTCTGTTGTAAGAATGAATCTGCAAAATTTCTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR GCA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAACTGGGTGGCACTGTATaGACTCAGAGTTCTCCACAA +
Preference number: 4 (lower is better)
Translates to: EIVERKCSFSGRLKSDSELGGTV*TQSSPQ
Trigger: TTGTGGAGAACTCTGAGTGCATACAGTGCCACCCAG...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR GCA 90 bp GTAAATGCTTCACAGTTTGAAGACAAAGGAATGCAACTTCCCAAAATGTGCCCGCACTTTGCCTCCTTCTaGATGGTATTCTTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: VNASQFEDKGMQLPKMCPHFASF*MVFFLF
Trigger: GAAGAGAAAGAATACCATGCAGAAGGAGGCAAAGTG...CGGGCACATTTTGGGAAGTTGCATTCCTTTGTCTTCAAACTGTGAAGCATTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp GCTAGAAATTTTGCAGATTCATTCTTACAACAGAGGTACAGCAAACAACCAGACCTTTGGGCGACTATCTaGGTCTATCATCCAGCACTT +
Preference number: 4 (lower is better)
Translates to: ARNFADSFLQQRYSKQPDLWATI*VYHPAL
Trigger: AAGTGCTGGATGATAGACGCAGATAGTCGCCCAAAG...GTCTGGTTGTTTGCTGTACCTCTGTTGTAAGAATGAATCTGCAAAATTTCTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR GCA 90 bp GTAAATGCTTCACAGTTTGAAGACAAAGGAATGCAACTTCCCAAAATGTGCCCGTATCCTCCGTGGTCATaGTCCAATAAATTCACTGCT +
Preference number: 4 (lower is better)
Translates to: VNASQFEDKGMQLPKMCPYPPWS*SNKFTA
Trigger: AGCAGTGAATTTATTGGAGCATGACCACGGAGGATA...CGGGCACATTTTGGGAAGTTGCATTCCTTTGTCTTCAAACTGTGAAGCATTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp ATTGGAATGACCTCAGGAGCTTTAAAAACTACGAATGCTTGGGTTTCAGCCCCATCCCCAATGAGGTTGTaGCTTTTTATAAGAGAGAGA +
Preference number: 4 (lower is better)
Translates to: IGMTSGALKTTNAWVSAPSPMRL*LFIRER
Trigger: TCTCTCTCTTATAAAAAGGCACAACCTCATTGGGGA...TGGGGCTGAAACCCAAGCATTCGTAGTTTTTAAAGCTCCTGAGGTCATTCCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR GCA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAAATTAGGACCCGTAGGTaGAGTTTGGATGGCACAGGT +
Preference number: 4 (lower is better)
Translates to: EIVERKCSFSGRLKSDSEIRTRR*SLDGTG
Trigger: ACCTGTGCCATCCAAACTGCACCTACGGGTCCTAAT...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR CCA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAACCTGTAAATTTCTCATaGGCAGCTCCTTCAGTCCGG +
Preference number: 4 (lower is better)
Translates to: EIVERKCSFSGRLKSDSEPVNFS*AAPSVR
Trigger: CCGGACTGAAGGAGCTGCCCATGAGAAATTTACAGG...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR CCA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAACCCATTGGGACAGCTTaGATCACACTTTTGGCAGCT +
Preference number: 4 (lower is better)
Translates to: EIVERKCSFSGRLKSDSEPIGTA*ITLLAA
Trigger: AGCTGCCAAAAGTGTGATCCAAGCTGTCCCAATGGG...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR CCA 90 bp CTACCTGAATTCCACACTACTCATAATGCTACTGTCATTCGCACCTGTAAAATGCAGTTGAGCAGGTACTaGGAGCCAATATTGTCTTTG +
Preference number: 4 (lower is better)
Translates to: LPEFHTTHNATVIRTCKMQLSRY*EPILSL
Trigger: CAAAGACAATATTGGCTCCCAGTACCTGCTCAACTG...CATTTTACAGGTGCGAATGACAGTAGCATTATGAGTAGTGTGGAATTCAGGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp GCTAGAAATTTTGCAGATTCATTCTTACAACAGAGGTACAGCAAACAACCAGACCAACTCACGGAACTTTaGGCGACTATCTGCGTCTAT +
Preference number: 4 (lower is better)
Translates to: ARNFADSFLQQRYSKQPDQLTEL*ATICVY
Trigger: ATAGACGCAGATAGTCGCCCAAAGTTCCGTGAGTTG...GTCTGGTTGTTTGCTGTACCTCTGTTGTAAGAATGAATCTGCAAAATTTCTAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CCA 90 bp CCTCAAATTAGGAGATACGTTTTTGCGAGAACAAAAGCGGTGCTATCCTTAGGTGGAGTCTGTAGGACTTaGCAAATGCATTCTTTCATC +
Preference number: 4 (lower is better)
Translates to: PQIRRYVFARTKAVLSLGGVCRT*QMHSFI
Trigger: GATGAAAGAATGCATTTGCCAAGTCCTACAGACTCC...ACCTAAGGATAGCACCGCTTTTGTTCTCGCAAAAACGTATCTCCTAATTTGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp TTTGATGTGTCATCCTCTCTTGCTGATTTCATGACAGCAAGACAGGGGCAGCATTCTTCCTTGATAAATTaGATGGGGTGGATATTGACT +
Preference number: 4 (lower is better)
Translates to: FDVSSSLADFMTARQGQHSSLIN*MGWILT
Trigger: AGTCAATATCCACCCCATCCAATTTATCAAGGAAGA...ATGCTGCCCCTGTCTTGCTGTCATGAAATCAGCAAGAGAGGATGACACATCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR TCA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAATTTTCAGGCCAAGCCTaGATCAGCAAAAACCCTGTG +
Preference number: 4 (lower is better)
Translates to: EIVERKCSFSGRLKSDSEFSGQA*ISKNPV
Trigger: CACAGGGTTTTTGCTGATTCAGGCTTGGCCTGAAAA...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR TCA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAAACTGCAAGAGAAAACTaGCCATGTTGCTTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: EIVERKCSFSGRLKSDSETAREN*PCCLVL
Trigger: CAGGACCAAGCAACATGGTCAGTTTTCTCTTGCAGT...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR TCA 90 bp CTACCTGAATTCCACACTACTCATAATGCTACTGTCATTCGCACCTGTAAAATGATGTTATGTTCAGGCTaGCGACTGCAAGAGAAAACT +
Preference number: 4 (lower is better)
Translates to: LPEFHTTHNATVIRTCKMMLCSG*RLQEKT
Trigger: AGTTTTCTCTTGCAGTCGTCAGCCTGAACATAACAT...CATTTTACAGGTGCGAATGACAGTAGCATTATGAGTAGTGTGGAATTCAGGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR TCA 90 bp GTAAATGCTTCACAGTTTGAAGACAAAGGAATGCAACTTCCCAAAATGTGCCCGTTTTGGAGAATTCGATaGTCAACTCACGGAACTTTG +
Preference number: 4 (lower is better)
Translates to: VNASQFEDKGMQLPKMCPFWRIR*STHGTL
Trigger: CAAAGTTCCGTGAGTTGATCATCGAATTCTCCAAAA...CGGGCACATTTTGGGAAGTTGCATTCCTTTGTCTTCAAACTGTGAAGCATTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR TCA 90 bp TTATTATTTGATGTGTCATCCTCTCTTGCTGATTTCATGACAGCAAGACAGGGGACAGGGGCAGCATACTaGGTTTCAAAACAATGGAAT +
Preference number: 4 (lower is better)
Translates to: LLFDVSSSLADFMTARQGTGAAY*VSKQWN
Trigger: ATTCCATTGTTTTGAAACTCAGTATGCTGCCCCTGT...CCCCTGTCTTGCTGTCATGAAATCAGCAAGAGAGGATGACACATCAAATAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAATCAAAAGTGCCCAACTaGGTGAGCTTGTTACTCGTG +
Preference number: 4 (lower is better)
Translates to: EIVERKCSFSGRLKSDSESKVPN*VSLLLV
Trigger: CACGAGTAACAAGCTCACGCAGTTGGGCACTTTTGA...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR GCA 90 bp AAACACACTGCCTGCTACATAGTTTTTATCCCAGGTATAATTTGTGAGGAATGTAACCGCACGGCGCCATaGAGGATTTCCTGTAAATTT +
Preference number: 4 (lower is better)
Translates to: KHTACYIVFIPGIICEECNRTAP*RISCKF
Trigger: AAATTTACAGGAAATCCTGCATGGCGCCGTGCGGTT...ACATTCCTCACAAATTATACCTGGGATAAAAACTATGTAGCAGGCAGTGTGTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR GCA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAAAACCGCACGGCGCCATaGAGGATTTCCTGTAAATTT +
Preference number: 4 (lower is better)
Translates to: EIVERKCSFSGRLKSDSENRTAP*RISCKF
Trigger: AAATTTACAGGAAATCCTGCATGGCGCCGTGCGGTT...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR GCA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAAGTTCAGGCTGACGACTaGAAGAGAAAACTGACCATG +
Preference number: 4 (lower is better)
Translates to: EIVERKCSFSGRLKSDSEVQADD*KRKLTM
Trigger: CATGGTCAGTTTTCTCTTGCAGTCGTCAGCCTGAAC...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR GCA 90 bp TTATTATTTGATGTGTCATCCTCTCTTGCTGATTTCATGACAGCAAGACAGGGGCACTTTGCCTCCTTCTaGATGGTATTCTTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: LLFDVSSSLADFMTARQGHFASF*MVFFLF
Trigger: GAAGAGAAAGAATACCATGCAGAAGGAGGCAAAGTG...CCCCTGTCTTGCTGTCATGAAATCAGCAAGAGAGGATGACACATCAAATAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp CTACCTGAATTCCACACTACTCATAATGCTACTGTCATTCGCACCTGTAAAATGGGATCTTTAGTGTTTTaGAGTGGAAGCCTTGAAGCA +
Preference number: 4 (lower is better)
Translates to: LPEFHTTHNATVIRTCKMGSLVF*SGSLEA
Trigger: TGCTTCAAGGCTTCCACTGCAAAACACTAAAGATCC...CATTTTACAGGTGCGAATGACAGTAGCATTATGAGTAGTGTGGAATTCAGGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp GTAAATGCTTCACAGTTTGAAGACAAAGGAATGCAACTTCCCAAAATGTGCCCGTTATCCTACTGTACCTaGCATGACTTGATACAGTAC +
Preference number: 4 (lower is better)
Translates to: VNASQFEDKGMQLPKMCPLSYCT*HDLIQY
Trigger: GTACTGTATCAAGTCATGGCAGGTACAGTAGGATAA...CGGGCACATTTTGGGAAGTTGCATTCCTTTGTCTTCAAACTGTGAAGCATTTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp CTACCTGAATTCCACACTACTCATAATGCTACTGTCATTCGCACCTGTAAAATGAATTTCAACAGGTGTTaGCTACGTGGAATAGCAGCT +
Preference number: 4 (lower is better)
Translates to: LPEFHTTHNATVIRTCKMNFNRC*LRGIAA
Trigger: AGCTGCTATTCCACGTAGGCAACACCTGTTGAAATT...CATTTTACAGGTGCGAATGACAGTAGCATTATGAGTAGTGTGGAATTCAGGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CCA 90 bp TTCTGCTCAAAGGGACAATATTCTTGCTGGATGCGTTTCTGTAAATGCTTCACATTGTTACTCGTGCCTTaGCAAACTTTCTTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: FCSKGQYSCWMRFCKCFTLLLVP*QTFFSS
Trigger: GGAGGAAAAGAAAGTTTGCCAAGGCACGAGTAACAA...TGTGAAGCATTTACAGAAACGCATCCAGCAAGAATATTGTCCCTTTGAGCAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAAACTTCTTCACGCAGGTaGCACCAAAGCTGTATTTGC +
Preference number: 4 (lower is better)
Translates to: EIVERKCSFSGRLKSDSETSSRR*HQSCIC
Trigger: GCAAATACAGCTTTGGTGCCACCTGCGTGAAGAAGT...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR CCA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAAAGGTTCTCAAAGGCATaGAGGTCCGTCCTGTTTTCA +
Preference number: 4 (lower is better)
Translates to: EIVERKCSFSGRLKSDSERFSKA*RSVLFS
Trigger: TGAAAACAGGACGGACCTCCATGCCTTTGAGAACCT...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR CCA 90 bp TTATTATTTGATGTGTCATCCTCTCTTGCTGATTTCATGACAGCAAGACAGGGGCTTAAAGATGCCATTTaGCTTGGCTTCCTTGGGAAA +
Preference number: 4 (lower is better)
Translates to: LLFDVSSSLADFMTARQGLKDAI*LGFLGK
Trigger: TTTCCCAAGGAAGCCAAGCCAAATGGCATCTTTAAG...CCCCTGTCTTGCTGTCATGAAATCAGCAAGAGAGGATGACACATCAAATAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp CTACCTGAATTCCACACTACTCATAATGCTACTGTCATTCGCACCTGTAAAATGCTGATGAATCCAATGTaGGCTGGAATCCGAGTTATT +
Preference number: 4 (lower is better)
Translates to: LPEFHTTHNATVIRTCKMLMNPM*AGIRVI
Trigger: AATAACTCGGATTCCAGCCCACATTGGATTCATCAG...CATTTTACAGGTGCGAATGACAGTAGCATTATGAGTAGTGTGGAATTCAGGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CCA 90 bp CACACTGCCTGCTACATAGTTTTTATCCCAGGTATAATTTGTGAGGAATGTATAGAAGACCTTCAGGGATaGAGTCCAAGCTTTGAGTAC +
Preference number: 4 (lower is better)
Translates to: HTACYIVFIPGIICEECIEDLQG*SPSFEY
Trigger: GTACTCAAAGCTTGGACTCCATCCCTGAAGGTCTTC...TATACATTCCTCACAAATTATACCTGGGATAAAAACTATGTAGCAGGCAGTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR TCA 90 bp GCTAGAAATTTTGCAGATTCATTCTTACAACAGAGGTACAGCAAACAACCAGACATGTTATGTTCAGGCTaGCGACTGCAAGAGAAAACT +
Preference number: 4 (lower is better)
Translates to: ARNFADSFLQQRYSKQPDMLCSG*RLQEKT
Trigger: AGTTTTCTCTTGCAGTCGTCAGCCTGAACATAACAT...GTCTGGTTGTTTGCTGTACCTCTGTTGTAAGAATGAATCTGCAAAATTTCTAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR TCA 90 bp AGAGAGAACAGGGATCAAATCTGTCACAAACACACACATACACACACACACATATTTTGGAGAATTCGATaGTCAACTCACGGAACTTTG +
Preference number: 4 (lower is better)
Translates to: RENRDQICHKHTHTHTHIFWRIR*STHGTL
Trigger: CAAAGTTCCGTGAGTTGATCATCGAATTCTCCAAAA...TATGTGTGTGTGTGTATGTGTGTGTTTGTGACAGATTTGATCCCTGTTCTCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR GCA 90 bp ATTGGAATGACCTCAGGAGCTTTAAAAACTACGAATGCTTGGGTTTCAGCCCCAAATATTCTTGCTGGATaGGTTTCTGTAAATGCTTCA +
Preference number: 4 (lower is better)
Translates to: IGMTSGALKTTNAWVSAPNILAG*VSVNAS
Trigger: TGAAGCATTTACAGAAACGCATCCAGCAAGAATATT...TGGGGCTGAAACCCAAGCATTCGTAGTTTTTAAAGCTCCTGAGGTCATTCCAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR GCA 90 bp CTACCTGAATTCCACACTACTCATAATGCTACTGTCATTCGCACCTGTAAAATGGGAAAACACACTGCCTaGTACATAGTTTTTATCCCA +
Preference number: 4 (lower is better)
Translates to: LPEFHTTHNATVIRTCKMGKHTA*YIVFIP
Trigger: TGGGATAAAAACTATGTAGCAGGCAGTGTGTTTTCC...CATTTTACAGGTGCGAATGACAGTAGCATTATGAGTAGTGTGGAATTCAGGTAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CCA 90 bp CACACTGCCTGCTACATAGTTTTTATCCCAGGTATAATTTGTGAGGAATGTATACAGCCACCTCCTGGATaGTCTTTAAGAAGGAAAGAT +
Preference number: 4 (lower is better)
Translates to: HTACYIVFIPGIICEECIQPPPG*SLRRKD
Trigger: ATCTTTCCTTCTTAAAGACCATCCAGGAGGTGGCTG...TATACATTCCTCACAAATTATACCTGGGATAAAAACTATGTAGCAGGCAGTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CCA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAACAGCCACCTCCTGGATaGTCTTTAAGAAGGAAAGAT +
Preference number: 4 (lower is better)
Translates to: EIVERKCSFSGRLKSDSEQPPPG*SLRRKD
Trigger: ATCTTTCCTTCTTAAAGACCATCCAGGAGGTGGCTG...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR CCA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAAAATATCCAGTTCCTGTaGATCCAGAGGAGGAGTATG +
Preference number: 4 (lower is better)
Translates to: EIVERKCSFSGRLKSDSENIQFL*IQRRSM
Trigger: CATACTCCTCCTCTGGATCCACAGGAACTGGATATT...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR TCA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAAATGTTATGTTCAGGCTaGCGACTGCAAGAGAAAACT +
Preference number: 4 (lower is better)
Translates to: EIVERKCSFSGRLKSDSEMLCSG*RLQEKT
Trigger: AGTTTTCTCTTGCAGTCGTCAGCCTGAACATAACAT...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR TCA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAAATAATTTTGGTTTTCTaGCCGGAGGTCCCAAACAGT +
Preference number: 4 (lower is better)
Translates to: EIVERKCSFSGRLKSDSEIILVF*PEVPNS
Trigger: ACTGTTTGGGACCTCCGGTCAGAAAACCAAAATTAT...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR TCA 90 bp TTCTGCTCAAAGGGACAATATTCTTGCTGGATGCGTTTCTGTAAATGCTTCACAAAATGCTTCACAGTTTaGAGACAAAGGAATGCAACT +
Preference number: 4 (lower is better)
Translates to: FCSKGQYSCWMRFCKCFTKCFTV*RQRNAT
Trigger: AGTTGCATTCCTTTGTCTTCAAACTGTGAAGCATTT...TGTGAAGCATTTACAGAAACGCATCCAGCAAGAATATTGTCCCTTTGAGCAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp GTAAATGCTTCACAGTTTGAAGACAAAGGAATGCAACTTCCCAAAATGTGCCCGAATATTCTTGCTGGATaGGTTTCTGTAAATGCTTCA +
Preference number: 4 (lower is better)
Translates to: VNASQFEDKGMQLPKMCPNILAG*VSVNAS
Trigger: TGAAGCATTTACAGAAACGCATCCAGCAAGAATATT...CGGGCACATTTTGGGAAGTTGCATTCCTTTGTCTTCAAACTGTGAAGCATTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp CTACCTGAATTCCACACTACTCATAATGCTACTGTCATTCGCACCTGTAAAATGAAGGGACAATATTCTTaGTGGATGCGTTTCTGTAAA +
Preference number: 4 (lower is better)
Translates to: LPEFHTTHNATVIRTCKMKGQYS*WMRFCK
Trigger: TTTACAGAAACGCATCCAGCAAGAATATTGTCCCTT...CATTTTACAGGTGCGAATGACAGTAGCATTATGAGTAGTGTGGAATTCAGGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR GCA 90 bp GTAAATGCTTCACAGTTTGAAGACAAAGGAATGCAACTTCCCAAAATGTGCCCGCTAAAACGAAGTTATTaGTGTCTGTTGTTAATCGGT +
Preference number: 4 (lower is better)
Translates to: VNASQFEDKGMQLPKMCPLKRSY*CLLLIG
Trigger: ACCGATTAACAACAGACAGCAATAACTTCGTTTTAG...CGGGCACATTTTGGGAAGTTGCATTCCTTTGTCTTCAAACTGTGAAGCATTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CCA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAATTGTTACTCGTGCCTTaGCAAACTTTCTTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: EIVERKCSFSGRLKSDSELLLVP*QTFFSS
Trigger: GGAGGAAAAGAAAGTTTGCCAAGGCACGAGTAACAA...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342916.7
3UTR CAA 72 bp TTGAGTTTCTACTCTGTGACAGGCGTTGTTCTAGCATaGAACAAAGCAGCCAGTTTGTTATTGAGATGTTTT +
Preference number: 4 (lower is better)
Translates to: LSFYSVTGVVLA*NKAASLLLRCF
Trigger: AAAACATCTCAATAACAAACTGGCTGCTTTGTTCAATGCTAGAACAACGCCTGTCACAGAGTAGAAACTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344576.6
CDS-3UTR TCA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAAACTAAAGTCAGACAGTaGAGATTTATTAGGACCCGT +
Preference number: 4 (lower is better)
Translates to: EIVERKCSFSGRLKSDSETKVRQ*RFIRTR
Trigger: ACGGGTCCTAATAAATCTTCACTGTCTGACTTTAGT...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR CCA 90 bp CACACTGCCTGCTACATAGTTTTTATCCCAGGTATAATTTGTGAGGAATGTATATCATACTATCCTCCGTaGTCATGCTCCAATAAATTC +
Preference number: 4 (lower is better)
Translates to: HTACYIVFIPGIICEECISYYPP*SCSNKF
Trigger: GAATTTATTGGAGCATGACCACGGAGGATAGTATGA...TATACATTCCTCACAAATTATACCTGGGATAAAAACTATGTAGCAGGCAGTGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CCA 90 bp AAACACACTGCCTGCTACATAGTTTTTATCCCAGGTATAATTTGTGAGGAATGTCAGATGATGAGAGTATaGCATGCAACTGGATTTTTC +
Preference number: 4 (lower is better)
Translates to: KHTACYIVFIPGIICEECQMMRV*HATGFF
Trigger: GAAAAATCCAGTTGCATGCCATACTCTCATCATCTG...ACATTCCTCACAAATTATACCTGGGATAAAAACTATGTAGCAGGCAGTGTGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR GCA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAAATTGTAGAAAGGAAATaGAGTTTTAGTGGGAGACTA +
Preference number: 4 (lower is better)
Translates to: EIVERKCSFSGRLKSDSEIVERK*SFSGRL
Trigger: TAGTCTCCCACTAAAACTGCATTTCCTTTCTACAAT...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342916.7
3UTR CAA 72 bp TTTTATGAAAGCCATCCAACTACTTACTCAATCCTCTaGAAATCTGCCTTTTGTAATGTAACTGATAGGCCA +
Preference number: 4 (lower is better)
Translates to: FYESHPTTYSIL*KSAFCNVTDRP
Trigger: TGGCCTATCAGTTACATTACAAAAGGCAGATTTCAAGAGGATTGAGTAAGTAGTTGGATGGCTTTCATAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS GCA 90 bp TCGCTCCGGCTCTCCCGATCAATACTGGACGGAGTCAGGGGGCCGTaGGCGGTGGTTGTGGCGTTGGCGGCGAGGCGGGGACTCGGGCGG +
Preference number: 5 (lower is better)
Translates to: SLRLSRSILDGVRGP*AVVVALAARRGLGR
Trigger: CCGCCCGAGTCCCCGCCTCGCCGCCAACGCCACAACCACCGCGCACGGCCCCCTGACTCCGTCCAGTATTGATCGGGAGAGCCGGAGCGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000275493.7
ENST00000342916.7
ENST00000344576.7
ENST00000420316.6
ENST00000454757.6
ENST00000455089.5
ENST00000459688.1
ENST00000463948.1
CDS CCA 90 bp GGCTCTCCCGATCAATACTGGACGGAGTCAGGGGGCCGTGCGCGGTaGTTGTGGCGTTGGCGGCGAGGCGGGGACTCGGGCGGACGCCGA +
Preference number: 5 (lower is better)
Translates to: GSPDQYWTESGGRAR*LWRWRRGGDSGGRR
Trigger: TCGGCGTCCGCCCGAGTCCCCGCCTCGCCGCCAACGCCACAACCACCGCGCACGGCCCCCTGACTCCGTCCAGTATTGATCGGGAGAGCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000275493.7
ENST00000342916.7
ENST00000344576.7
ENST00000420316.6
ENST00000454757.6
ENST00000455089.5
ENST00000459688.1
ENST00000463948.1
CDS GCA 90 bp CAGCGCCAGGAGCGCTGCCCCGGCCGTCCCGGAGGGTCGCATCGCTaGTCCCCGAAGAGCTCGCTCCGGCTCTCCCGATCAATACTGGAC +
Preference number: 5 (lower is better)
Translates to: QRQERCPGRPGGSHR*SPKSSLRLSRSILD
Trigger: GTCCAGTATTGATCGGGAGAGCCGGAGCGAGCTCTTCGGGGAGCAGCGATGCGACCCTCCGGGACGGCCGGGGCAGCGCTCCTGGCGCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000275493.7
ENST00000342916.7
ENST00000344576.7
ENST00000420316.6
ENST00000454757.6
ENST00000455089.5
ENST00000459688.1
ENST00000463948.1
CDS CCA 90 bp ATCGCTGCTCCCCGAAGAGCTCGCTCCGGCTCTCCCGATCAATACTaGACGGAGTCAGGGGGCCGTGCGCGGTGGTTGTGGCGTTGGCGG +
Preference number: 5 (lower is better)
Translates to: IAAPRRARSGSPDQY*TESGGRARWLWRWR
Trigger: CCGCCAACGCCACAACCACCGCGCACGGCCCCCTGACTCCGTCCAGTATTGATCGGGAGAGCCGGAGCGAGCTCTTCGGGGAGCAGCGAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000275493.7
ENST00000342916.7
ENST00000344576.7
ENST00000420316.6
ENST00000454757.6
ENST00000455089.5
ENST00000459688.1
ENST00000463948.1
CDS TCA 90 bp CACCCTCCAGAAGGTTGCACTTGTCCACGCATTCCCTGCCTCGGCTaGCATTCCGGCAAGAGACGCAGTCCCTGGGCTCCGGGCCCCAGC +
Preference number: 5 (lower is better)
Translates to: HPPEGCTCPRIPCLG*HSGKRRSPWAPGPS
Trigger: GCTGGGGCCCGGAGCCCAGGGACTGCGTCTCTTGCCGGAATGTCAGCCGAGGCAGGGAATGCGTGGACAAGTGCAACCTTCTGGAGGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000275493.7
ENST00000342916.7
ENST00000344576.7
ENST00000454757.6
ENST00000455089.5
CDS GCA 90 bp GACACAGGTGGGCTGGACAGTGTTGAGATACTCGGGGTTGCCCACTaGAGTGCTGTGGGGGTCCTGGTAGTGTGGGTCTCTGCTGGGCGC +
Preference number: 5 (lower is better)
Translates to: DTGGLDSVEILGVAH*SAVGVLVVWVSAGR
Trigger: GCGCCCAGCAGAGACCCACACTACCAGGACCCCCACAGCACTGCAGTGGGCAACCCCGAGTATCTCAACACTGTCCAGCCCACCTGTGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp GTGAAGAGGCTAAGGGCTTTGCGGCTTCTACCAGACAGAACTGTGCCTCCCTGGCAGTCACTGGGGGACTaGCCACGGCAGCGCCCGGAG +
Preference number: 5 (lower is better)
Translates to: VKRLRALRLLPDRTVPPWQSLGD*PRQRPE
Trigger: CTCCGGGCGCTGCCGTGGCAAGTCCCCCAGTGACTG...CCAGGGAGGCACAGTTCTGTCTGGTAGAAGCCGCAAAGCCCTTAGCCTCTTCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS GCA 90 bp TTCTCAGCGCGGAGAGGTCGCCTGCCGGAGGGAACCCACAGCAAATaGACAACCAGCCAGCAGCCCAGAGCTCCCTCTTGTTCTGAAGTC +
Preference number: 5 (lower is better)
Translates to: FSARRGRLPEGTHSK*TTSQQPRAPSCSEV
Trigger: GACTTCAGAACAAGAGGGAGCTCTGGGCTGCTGGCTGGTTGTGCATTTGCTGTGGGTTCCCTCCGGCAGGCGACCTCTCCGCGCTGAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000450046.1
CDS-3UTR CAA 90 bp CAGCTGTGGGCTATTGGTCCAAATGCTGATGAATCCAATGTGGGCTGGAATCCGGCGGTGGTTGTGGCGTaGGCGGCGAGGCGGGGACTC +
Preference number: 5 (lower is better)
Translates to: QLWAIGPNADESNVGWNPAVVVA*AARRGL
Trigger: GAGTCCCCGCCTCGCCGCCAACGCCACAACCACCGC...CGGATTCCAGCCCACATTGGATTCATCAGCATTTGGACCAATAGCCCACAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp TGCAACTTCCCAAAATGTGCCCGAGGTGGAAGTACTTCCTGGCTAGTCGGTGTAGCGGTGGTTGTGGCGTaGGCGGCGAGGCGGGGACTC +
Preference number: 5 (lower is better)
Translates to: CNFPKCARGGSTSWLVGVAVVVA*AARRGL
Trigger: GAGTCCCCGCCTCGCCGCCAACGCCACAACCACCGC...TACACCGACTAGCCAGGAAGTACTTCCACCTCGGGCACATTTTGGGAAGTTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS GCA 90 bp TGGCAGCAGTCACTGGGGGACTTGCCACGGCAGCGCCCGGAGCACTaGTGGGCACAGATGATTTTGGTCAGTTTCTGGCAGTTCTCCTCT +
Preference number: 5 (lower is better)
Translates to: WQQSLGDLPRQRPEH*WAQMILVSFWQFSS
Trigger: AGAGGAGAACTGCCAGAAACTGACCAAAATCATCTGTGCCCAGCAGTGCTCCGGGCGCTGCCGTGGCAAGTCCCCCAGTGACTGCTGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000275493.7
ENST00000342916.7
ENST00000344576.7
ENST00000420316.6
ENST00000454757.6
ENST00000455089.5
CDS GCA 90 bp GTCTGCGTACTTCCAGACCAGGGTGTTGTTTTCTCCCATGACTCCTaGCGGGCAGGTCTTGACGCAGTGGGGGCCGTCAATGTAGTGGGC +
Preference number: 5 (lower is better)
Translates to: VCVLPDQGVVFSHDS*RAGLDAVGAVNVVG
Trigger: GCCCACTACATTGACGGCCCCCACTGCGTCAAGACCTGCCCGGCAGGAGTCATGGGAGAAAACAACACCCTGGTCTGGAAGTACGCAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000275493.7
ENST00000342916.7
ENST00000344576.7
ENST00000454757.6
ENST00000455089.5
CDS GCA 90 bp GGTTGCCCACTGCAGTGCTGTGGGGGTCCTGGTAGTGTGGGTCTCTaGTGGGCGCGGGGTTCAGAGGCTGATTGTGATAGACAGGATTCT +
Preference number: 5 (lower is better)
Translates to: GCPLQCCGGPGSVGL*WARGSEADCDRQDS
Trigger: AGAATCCTGTCTATCACAATCAGCCTCTGAACCCCGCGCCCAGCAGAGACCCACACTACCAGGACCCCCACAGCACTGCAGTGGGCAACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp CCAAAATGTGCCCGAGGTGGAAGTACTTCCTGGCTAGTCGGTGTAAACGTTGCACCTGCCGGGCAGGTCTaGACGCAGTGGGGGCCGTCA +
Preference number: 5 (lower is better)
Translates to: PKCARGGSTSWLVGVNVAPAGQV*TQWGPS
Trigger: TGACGGCCCCCACTGCGTCAAGACCTGCCCGGCAGG...TGCAACGTTTACACCGACTAGCCAGGAAGTACTTCCACCTCGGGCACATTTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS GCA 90 bp TCCAGACAAGCCACTCACCAGGCACTGGGAGGAAGGTGTCGTCTATaGTGTCCTCAGTCAAGGCGCCTGTGGGGTCTGAGCTGTATCGCT +
Preference number: 5 (lower is better)
Translates to: SRQATHQALGGRCRL*CPQSRRLWGLSCIA
Trigger: AGCGATACAGCTCAGACCCCACAGGCGCCTTGACTGAGGACAGCATAGACGACACCTTCCTCCCAGTGCCTGGTGAGTGGCTTGTCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS GCA 90 bp CCTTCACTGTGTCTGCAAATCTGCCACTGTTTCCCCCTCTGGAGATaGTGGAGGGAGCACCTGGCTTGGACACTGGAGACTGGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: PSLCLQICHCFPLWR*WREHLAWTLETGCC
Trigger: GCAGCAGCCAGTCTCCAGTGTCCAAGCCAGGTGCTCCCTCCAGCATCTCCAGAGGGGGAAACAGTGGCAGATTTGCAGACACAGTGAAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CAA 90 bp TTGGGCAGCTCCTCTCCTGACCTGCCCATCACAGTCGCCAGATCCGTGAAGAGGCCCAACTGCGTGAGCTaGTTACTCGTGCCTTGGCAA +
Preference number: 5 (lower is better)
Translates to: LGSSSPDLPITVARSVKRPNCVS*LLVPWQ
Trigger: TTGCCAAGGCACGAGTAACAAGCTCACGCAGTTGGG...CCTCTTCACGGATCTGGCGACTGTGATGGGCAGGTCAGGAGAGGAGCTGCCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CAA 90 bp AGTCTAAGGAAGAATTCCATCCCCTCCGTTTCTTCTTTGCCCAGGAAGGGACAGCAGTCACTGGGGGACTaGCCACGGCAGCGCCCGGAG +
Preference number: 5 (lower is better)
Translates to: SLRKNSIPSVSSLPRKGQQSLGD*PRQRPE
Trigger: CTCCGGGCGCTGCCGTGGCAAGTCCCCCAGTGACTG...CTGTCCCTTCCTGGGCAAAGAAGAAACGGAGGGGATGGAATTCTTCCTTAGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp TGCAACTTCCCAAAATGTGCCCGAGGTGGAAGTACTTCCTGGCTAGTCGGTGTACGGCACACGTGGGGGTaGTCCACGCTGGCCATCACG +
Preference number: 5 (lower is better)
Translates to: CNFPKCARGGSTSWLVGVRHTWG*STLAIT
Trigger: CGTGATGGCCAGCGTGGACAACCCCCACGTGTGCCG...TACACCGACTAGCCAGGAAGTACTTCCACCTCGGGCACATTTTGGGAAGTTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS GCA 90 bp TTCCGTTACACACTTTGCGGCAAGGCCCTTCGCACTTCTTACACTTaGGGACGCCGTCTTCCTCCATCTCATAGCTGTCGGCCCCACAGG +
Preference number: 5 (lower is better)
Translates to: FRYTLCGKALRTSYT*GRRLPPSHSCRPHR
Trigger: CCTGTGGGGCCGACAGCTATGAGATGGAGGAAGACGGCGTCCGCAAGTGTAAGAAGTGCGAAGGGCCTTGCCGCAAAGTGTGTAACGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000275493.7
ENST00000342916.7
ENST00000344576.7
ENST00000420316.6
ENST00000454757.6
ENST00000455089.5
CDS-3UTR CAA 90 bp TGCAACTTCCCAAAATGTGCCCGAGGTGGAAGTACTTCCTGGCTAGTCGGTGTACACAGGGCAGGGTTGTaGCTGAACCGCACGGCGCCA +
Preference number: 5 (lower is better)
Translates to: CNFPKCARGGSTSWLVGVHRAGL*LNRTAP
Trigger: TGGCGCCGTGCGGTTCAGCAACAACCCTGCCCTGTG...TACACCGACTAGCCAGGAAGTACTTCCACCTCGGGCACATTTTGGGAAGTTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CAA 90 bp CTTAGAGGGAGCAGGTTGTTTAGGGTGACTGACCTCAGCCTTATGTGGACTTTACCTGCCGGGCAGGTCTaGACGCAGTGGGGGCCGTCA +
Preference number: 5 (lower is better)
Translates to: LRGSRLFRVTDLSLMWTLPAGQV*TQWGPS
Trigger: TGACGGCCCCCACTGCGTCAAGACCTGCCCGGCAGG...TAAAGTCCACATAAGGCTGAGGTCAGTCACCCTAAACAACCTGCTCCCTCTAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CAA 90 bp AACCAGACACAACAAAGAGCTTGTGCAGGCTCGGTCATGTGTTTATCTGCTCCTCCTGCCGGGCAGGTCTaGACGCAGTGGGGGCCGTCA +
Preference number: 5 (lower is better)
Translates to: NQTQQRACAGSVMCLSAPPAGQV*TQWGPS
Trigger: TGACGGCCCCCACTGCGTCAAGACCTGCCCGGCAGG...AGGAGCAGATAAACACATGACCGAGCCTGCACAAGCTCTTTGTTGTGTCTGGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CAA 90 bp GAATTTGCCTCCAAGTCCATGTCCTTGTGGCTAATCCCTAGGCCAGTAGTTCTCCGGCACACGTGGGGGTaGTCCACGCTGGCCATCACG +
Preference number: 5 (lower is better)
Translates to: EFASKSMSLWLIPRPVVLRHTWG*STLAIT
Trigger: CGTGATGGCCAGCGTGGACAACCCCCACGTGTGCCG...GAGAACTACTGGCCTAGGGATTAGCCACAAGGACATGGACTTGGAGGCAAATTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CAA 90 bp TTGGGCAGCTCCTCTCCTGACCTGCCCATCACAGTCGCCAGATCCGTGAAGAGGCAAGCCACGGTGGAATaGTTGCTGGTTGCACTCAGA +
Preference number: 5 (lower is better)
Translates to: LGSSSPDLPITVARSVKRQATVE*LLVALR
Trigger: TCTGAGTGCAACCAGCAACAATTCCACCGTGGCTTG...CCTCTTCACGGATCTGGCGACTGTGATGGGCAGGTCAGGAGAGGAGCTGCCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CAA 90 bp TTGGGCAGCTCCTCTCCTGACCTGCCCATCACAGTCGCCAGATCCGTGAAGAGGCATCCTCTGGAAGACTaGTGGCTTGTGCTCCTTGCT +
Preference number: 5 (lower is better)
Translates to: LGSSSPDLPITVARSVKRHPLED*WLVLLA
Trigger: AGCAAGGAGCACAAGCCACAAGTCTTCCAGAGGATG...CCTCTTCACGGATCTGGCGACTGTGATGGGCAGGTCAGGAGAGGAGCTGCCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS TCA 90 bp AACTCTGACGGCAGAAGAGAAGGGATCCATCCTAAGCATGACTCCTaGGCAGCTGGGCTCCCGCTCTGGTGGGACACGCTGCCATCATTA +
Preference number: 5 (lower is better)
Translates to: NSDGRREGIHPKHDS*AAGLPLWWDTLPSL
Trigger: TAATGATGGCAGCGTGTCCCACCAGAGCGGGAGCCCAGCTGCTCAGGAGTCATGCTTAGGATGGATCCCTTCTCTTCTGCCGTCAGAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000344576.7
CDS-3UTR CAA 90 bp CAAGATAGAGCCAGCAGAGAGAACAGGGATCAAATCTGTCACAAACACACACATGCGGTGGTTGTGGCGTaGGCGGCGAGGCGGGGACTC +
Preference number: 5 (lower is better)
Translates to: QDRASRENRDQICHKHTHAVVVA*AARRGL
Trigger: GAGTCCCCGCCTCGCCGCCAACGCCACAACCACCGC...ATGTGTGTGTTTGTGACAGATTTGATCCCTGTTCTCTCTGCTGGCTCTATCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CAA 90 bp TGGAGGACCTGCTGTGGCTTGGTCCTGGGTATCGAAAGAGTCTGGATTTTTAGGTTGCACAGGGCAGGGTaGTTGCTGAACCGCACGGCG +
Preference number: 5 (lower is better)
Translates to: WRTCCGLVLGIERVWIFRLHRAG*LLNRTA
Trigger: CGCCGTGCGGTTCAGCAACAACCCTGCCCTGTGCAA...CCTAAAAATCCAGACTCTTTCGATACCCAGGACCAAGCCACAGCAGGTCCTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CAA 90 bp GTCAAGATAGAGCCAGCAGAGAGAACAGGGATCAAATCTGTCACAAACACACACCAGTCACTGGGGGACTaGCCACGGCAGCGCCCGGAG +
Preference number: 5 (lower is better)
Translates to: VKIEPAERTGIKSVTNTHQSLGD*PRQRPE
Trigger: CTCCGGGCGCTGCCGTGGCAAGTCCCCCAGTGACTG...GTGTGTGTTTGTGACAGATTTGATCCCTGTTCTCTCTGCTGGCTCTATCTTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS TCA 90 bp GAAGGTGTCGTCTATGCTGTCCTCAGTCAAGGCGCCTGTGGGGTCTaGGCTGTATCGCTGCAAGAAGCTGTCTTCCTTGATGGGACAGCT +
Preference number: 5 (lower is better)
Translates to: EGVVYAVLSQGACGV*AVSLQEAVFLDGTA
Trigger: AGCTGTCCCATCAAGGAAGACAGCTTCTTGCAGCGATACAGCTCAGACCCCACAGGCGCCTTGACTGAGGACAGCATAGACGACACCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275493.7
ENST00000454757.6
ENST00000455089.5
CDS GCA 90 bp TGTGATCTTGACATGCTGCGGTGTTTTCACCAGTACGTTCCTGGCTaGCAGGTCGCGGTGCACCAAGCGACGGTCCTCCAAGTAGTTCAT +
Preference number: 5 (lower is better)
Translates to: CDLDMLRCFHQYVPG*QVAVHQATVLQVVH
Trigger: ATGAACTACTTGGAGGACCGTCGCTTGGTGCACCGCGACCTGGCAGCCAGGAACGTACTGGTGAAAACACCGCAGCATGTCAAGATCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275493.7
ENST00000454757.6
ENST00000455089.5
CDS GCA 90 bp CGGACTGGTTTATGTATTCAGGCACTGGGAGGAAGGTGTCGTCTATaGTGTCCTCAGTCAAGGCGCCTGTGGGGTCTGAGCTGTATCGCT +
Preference number: 5 (lower is better)
Translates to: RTGLCIQALGGRCRL*CPQSRRLWGLSCIA
Trigger: AGCGATACAGCTCAGACCCCACAGGCGCCTTGACTGAGGACAGCATAGACGACACCTTCCTCCCAGTGCCTGAATACATAAACCAGTCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS GCA 90 bp GGCTCGGTCATGTGTTTATCTGCTCCTTACGCCCTTCACTGTGTCTaGAAATCTGCCACTGTTTCCCCCTCTGGAGATGCTGGAGGGAGC +
Preference number: 5 (lower is better)
Translates to: GSVMCLSAPYALHCV*KSATVSPSGDAGGS
Trigger: GCTCCCTCCAGCATCTCCAGAGGGGGAAACAGTGGCAGATTTGCAGACACAGTGAAGGGCGTAAGGAGCAGATAAACACATGACCGAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS CCA 90 bp ATCGACATGTTGCTGAGAAAGTCACTGCTGACTATGTCCCGCCACTaGATGCTCTCCACGTTGCACAGGGCAGGGTTGTTGCTGAACCGC +
Preference number: 5 (lower is better)
Translates to: IDMLLRKSLLTMSRH*MLSTLHRAGLLLNR
Trigger: GCGGTTCAGCAACAACCCTGCCCTGTGCAACGTGGAGAGCATCCAGTGGCGGGACATAGTCAGCAGTGACTTTCTCAGCAACATGTCGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000275493.7
ENST00000342916.7
ENST00000344576.7
ENST00000420316.6
ENST00000450046.1
CDS-3UTR CAA 90 bp TTATTATTTGATGTGTCATCCTCTCTTGCTGATTTCATGACAGCAAGACAGGGGGGCCGTGCGCGGTGGTaGTGGCGTTGGCGGCGAGGC +
Preference number: 5 (lower is better)
Translates to: LLFDVSSSLADFMTARQGGRARW*WRWRRG
Trigger: GCCTCGCCGCCAACGCCACAACCACCGCGCACGGCC...CCCCTGTCTTGCTGTCATGAAATCAGCAAGAGAGGATGACACATCAAATAATAA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp CAGCTGTGGGCTATTGGTCCAAATGCTGATGAATCCAATGTGGGCTGGAATCCGCCCCAGCAGCTCCCATaGGGACAGCTTGGATCACAC +
Preference number: 5 (lower is better)
Translates to: QLWAIGPNADESNVGWNPPQQLP*GQLGSH
Trigger: GTGTGATCCAAGCTGTCCCAATGGGAGCTGCTGGGG...CGGATTCCAGCCCACATTGGATTCATCAGCATTTGGACCAATAGCCCACAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp CACAACAAAGAGCTTGTGCAGGCTCGGTCATGTGTTTATCTGCTCCTTACGCCCCCCCAGCAGCTCCCATaGGGACAGCTTGGATCACAC +
Preference number: 5 (lower is better)
Translates to: HNKELVQARSCVYLLLTPPQQLP*GQLGSH
Trigger: GTGTGATCCAAGCTGTCCCAATGGGAGCTGCTGGGG...GGGCGTAAGGAGCAGATAAACACATGACCGAGCCTGCACAAGCTCTTTGTTGTG
56% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CAA 90 bp AGGGCTTTGCGGCTTCTACCAGACAGAACTGTGCCTCCCTGGACAGATGAAGTGGCACCAAAGCTGTATTaGCCCTCGGGGTTCACATCC +
Preference number: 5 (lower is better)
Translates to: RALRLLPDRTVPPWTDEVAPKLY*PSGFTS
Trigger: GGATGTGAACCCCGAGGGCAAATACAGCTTTGGTGC...CACTTCATCTGTCCAGGGAGGCACAGTTCTGTCTGGTAGAAGCCGCAAAGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CAA 90 bp GCAAACAACCAGACACAACAAAGAGCTTGTGCAGGCTCGGTCATGTGTTTATCTCGGCACACGTGGGGGTaGTCCACGCTGGCCATCACG +
Preference number: 5 (lower is better)
Translates to: ANNQTQQRACAGSVMCLSRHTWG*STLAIT
Trigger: CGTGATGGCCAGCGTGGACAACCCCCACGTGTGCCG...AGATAAACACATGACCGAGCCTGCACAAGCTCTTTGTTGTGTCTGGTTGTTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CAA 90 bp TGGAGGACCTGCTGTGGCTTGGTCCTGGGTATCGAAAGAGTCTGGATTTTTAGGGTGGGCTGGACAGTGTaGAGATACTCGGGGTTGCCC +
Preference number: 5 (lower is better)
Translates to: WRTCCGLVLGIERVWIFRVGWTV*RYSGLP
Trigger: GGGCAACCCCGAGTATCTCAACACTGTCCAGCCCAC...CCTAAAAATCCAGACTCTTTCGATACCCAGGACCAAGCCACAGCAGGTCCTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS GCA 90 bp ATGCTGTCCTCAGTCAAGGCGCCTGTGGGGTCTGAGCTGTATCGCTaGAAGAAGCTGTCTTCCTTGATGGGACAGCTTTGCAGCCCATTT +
Preference number: 5 (lower is better)
Translates to: MLSSVKAPVGSELYR*KKLSSLMGQLCSPF
Trigger: AAATGGGCTGCAAAGCTGTCCCATCAAGGAAGACAGCTTCTTGCAGCGATACAGCTCAGACCCCACAGGCGCCTTGACTGAGGACAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275493.7
ENST00000454757.6
ENST00000455089.5
CDS GCA 90 bp CATGTGTTTATCTGCTCCTTACGCCCTTCACTGTGTCTGCAAATCTaGCACTGTTTCCCCCTCTGGAGATGCTGGAGGGAGCACCTGGCT +
Preference number: 5 (lower is better)
Translates to: HVFICSLRPSLCLQI*HCFPLWRCWREHLA
Trigger: AGCCAGGTGCTCCCTCCAGCATCTCCAGAGGGGGAAACAGTGGCAGATTTGCAGACACAGTGAAGGGCGTAAGGAGCAGATAAACACATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CAA 90 bp CAGCTGTGGGCTATTGGTCCAAATGCTGATGAATCCAATGTGGGCTGGAATCCGTGGATGCTCTCCACGTaGCACAGGGCAGGGTTGTTG +
Preference number: 5 (lower is better)
Translates to: QLWAIGPNADESNVGWNPWMLST*HRAGLL
Trigger: CAACAACCCTGCCCTGTGCAACGTGGAGAGCATCCA...CGGATTCCAGCCCACATTGGATTCATCAGCATTTGGACCAATAGCCCACAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CAA 90 bp CAAACAAGTCAGTCTAACGCTCATGACTGGAAACCACTGGTCCATCAGTGGGGAGCTTCGTCTCGGAATTaGCGGCAGACCAGGCAGTCG +
Preference number: 5 (lower is better)
Translates to: QTSQSNAHDWKPLVHQWGASSRN*RQTRQS
Trigger: CGACTGCCTGGTCTGCCGCAAATTCCGAGACGAAGC...TCCCCACTGATGGACCAGTGGTTTCCAGTCATGAGCGTTAGACTGACTTGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp TGCAACTTCCCAAAATGTGCCCGAGGTGGAAGTACTTCCTGGCTAGTCGGTGTAACCTGGCCTGTGGCCTaGCAGCTGTTTTCACCTCTG +
Preference number: 5 (lower is better)
Translates to: CNFPKCARGGSTSWLVGVTWPVA*QLFSPL
Trigger: CAGAGGTGAAAACAGCTGCAAGGCCACAGGCCAGGT...TACACCGACTAGCCAGGAAGTACTTCCACCTCGGGCACATTTTGGGAAGTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp TGGAGGACCTGCTGTGGCTTGGTCCTGGGTATCGAAAGAGTCTGGATTTTTAGGACCTGGCCTGTGGCCTaGCAGCTGTTTTCACCTCTG +
Preference number: 5 (lower is better)
Translates to: WRTCCGLVLGIERVWIFRTWPVA*QLFSPL
Trigger: CAGAGGTGAAAACAGCTGCAAGGCCACAGGCCAGGT...CCTAAAAATCCAGACTCTTTCGATACCCAGGACCAAGCCACAGCAGGTCCTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp TGGAGGACCTGCTGTGGCTTGGTCCTGGGTATCGAAAGAGTCTGGATTTTTAGGGCACACTGGATACAGTaGTCTGGTCCCCGTCCTGTG +
Preference number: 5 (lower is better)
Translates to: WRTCCGLVLGIERVWIFRAHWIQ*SGPRPV
Trigger: CACAGGACGGGGACCAGACAACTGTATCCAGTGTGC...CCTAAAAATCCAGACTCTTTCGATACCCAGGACCAAGCCACAGCAGGTCCTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp CACAACAAAGAGCTTGTGCAGGCTCGGTCATGTGTTTATCTGCTCCTTACGCCCGCACACTGGATACAGTaGTCTGGTCCCCGTCCTGTG +
Preference number: 5 (lower is better)
Translates to: HNKELVQARSCVYLLLTPAHWIQ*SGPRPV
Trigger: CACAGGACGGGGACCAGACAACTGTATCCAGTGTGC...GGGCGTAAGGAGCAGATAAACACATGACCGAGCCTGCACAAGCTCTTTGTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CAA 90 bp GTGAAGAGGCTAAGGGCTTTGCGGCTTCTACCAGACAGAACTGTGCCTCCCTGGAGTAGTTCATGCCCTTaGCGATCTGCACACACCAGT +
Preference number: 5 (lower is better)
Translates to: VKRLRALRLLPDRTVPPWSSSCP*RSAHTS
Trigger: ACTGGTGTGTGCAGATCGCAAAGGGCATGAACTACT...CCAGGGAGGCACAGTTCTGTCTGGTAGAAGCCGCAAAGCCCTTAGCCTCTTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CAA 90 bp CAGCTGTGGGCTATTGGTCCAAATGCTGATGAATCCAATGTGGGCTGGAATCCGGAGCCAGCGGGCCTTTaGGGAACGGACTGGTTTATG +
Preference number: 5 (lower is better)
Translates to: QLWAIGPNADESNVGWNPEPAGL*GTDWFM
Trigger: CATAAACCAGTCCGTTCCCAAAAGGCCCGCTGGCTC...CGGATTCCAGCCCACATTGGATTCATCAGCATTTGGACCAATAGCCCACAGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS GCA 90 bp TGGAATGCTAGGCCAAGTGCAACTGGTCAGGAATGCCATCCTGCATaGTGGCTGTTGCTCTTCTGGGCACTTAGAAAGTCCAGGCAAAGG +
Preference number: 5 (lower is better)
Translates to: WNARPSATGQECHPA*WLLLFWALRKSRQR
Trigger: CCTTTGCCTGGACTTTCTAAGTGCCCAGAAGAGCAACAGCCAGCATGCAGGATGGCATTCCTGACCAGTTGCACTTGGCCTAGCATTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459688.1
CDS GCA 90 bp CGGATGCTGCTTAGTTCACGATGTGGCCTGCGCCTTACTGAGGCTTaGTCTAATGCGCTGGAGGGTTTAATAATGCGATCTGGGACACAG +
Preference number: 5 (lower is better)
Translates to: RMLLSSRCGLRLTEA*SNALEGLIMRSGTQ
Trigger: CTGTGTCCCAGATCGCATTATTAAACCCTCCAGCGCATTAGAGCAAGCCTCAGTAAGGCGCAGGCCACATCGTGAACTAAGCAGCATCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485503.1
CDS-3UTR CAA 90 bp CTTAGAGGGAGCAGGTTGTTTAGGGTGACTGACCTCAGCCTTATGTGGACTTTACCCCAGCAGCTCCCATaGGGACAGCTTGGATCACAC +
Preference number: 5 (lower is better)
Translates to: LRGSRLFRVTDLSLMWTLPQQLP*GQLGSH
Trigger: GTGTGATCCAAGCTGTCCCAATGGGAGCTGCTGGGG...TAAAGTCCACATAAGGCTGAGGTCAGTCACCCTAAACAACCTGCTCCCTCTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CAA 90 bp GAATTTGCCTCCAAGTCCATGTCCTTGTGGCTAATCCCTAGGCCAGTAGTTCTCTCGCACTTCTTACACTaGCGGACGCCGTCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: EFASKSMSLWLIPRPVVLSHFLH*RTPSSS
Trigger: GGAGGAAGACGGCGTCCGCAAGTGTAAGAAGTGCGA...GAGAACTACTGGCCTAGGGATTAGCCACAAGGACATGGACTTGGAGGCAAATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CAA 90 bp TGGAGGACCTGCTGTGGCTTGGTCCTGGGTATCGAAAGAGTCTGGATTTTTAGGATTCCGTTACACACTTaGCGGCAAGGCCCTTCGCAC +
Preference number: 5 (lower is better)
Translates to: WRTCCGLVLGIERVWIFRIPLHT*RQGPSH
Trigger: GTGCGAAGGGCCTTGCCGCAAAGTGTGTAACGGAAT...CCTAAAAATCCAGACTCTTTCGATACCCAGGACCAAGCCACAGCAGGTCCTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp CAGCTGTGGGCTATTGGTCCAAATGCTGATGAATCCAATGTGGGCTGGAATCCGTCACCCTCCAGAAGGTaGCACTTGTCCACGCATTCC +
Preference number: 5 (lower is better)
Translates to: QLWAIGPNADESNVGWNPSPSRR*HLSTHS
Trigger: GGAATGCGTGGACAAGTGCAACCTTCTGGAGGGTGA...CGGATTCCAGCCCACATTGGATTCATCAGCATTTGGACCAATAGCCCACAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp CACAACAAAGAGCTTGTGCAGGCTCGGTCATGTGTTTATCTGCTCCTTACGCCCTCACCCTCCAGAAGGTaGCACTTGTCCACGCATTCC +
Preference number: 5 (lower is better)
Translates to: HNKELVQARSCVYLLLTPSPSRR*HLSTHS
Trigger: GGAATGCGTGGACAAGTGCAACCTTCTGGAGGGTGA...GGGCGTAAGGAGCAGATAAACACATGACCGAGCCTGCACAAGCTCTTTGTTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CAA 90 bp CCGCCCTTGAGAACCAGTGCCTTTCCTGCTAAGCAATCCATAGTCCCCTTATGTTCTCCACAAACTCCCTaGGCTCACCCTCCAGAAGGT +
Preference number: 5 (lower is better)
Translates to: PPLRTSAFPAKQSIVPLCSPQTP*AHPPEG
Trigger: ACCTTCTGGAGGGTGAGCCAAGGGAGTTTGTGGAGA...ACATAAGGGGACTATGGATTGCTTAGCAGGAAAGGCACTGGTTCTCAAGGGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CAA 90 bp TGCAGTGGAAGCCTTGAAGCAGAACCACTGGAATCAAGCATCCTCTGGAAGACTGCACACTGGATACAGTaGTCTGGTCCCCGTCCTGTG +
Preference number: 5 (lower is better)
Translates to: CSGSLEAEPLESSILWKTAHWIQ*SGPRPV
Trigger: CACAGGACGGGGACCAGACAACTGTATCCAGTGTGC...AGTCTTCCAGAGGATGCTTGATTCCAGTGGTTCTGCTTCAAGGCTTCCACTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp TGCAACTTCCCAAAATGTGCCCGAGGTGGAAGTACTTCCTGGCTAGTCGGTGTAATCCGTAGGTGCAGTTaGGATGGCACAGGTGGCACA +
Preference number: 5 (lower is better)
Translates to: CNFPKCARGGSTSWLVGVIRRCS*DGTGGT
Trigger: TGTGCCACCTGTGCCATCCAAACTGCACCTACGGAT...TACACCGACTAGCCAGGAAGTACTTCCACCTCGGGCACATTTTGGGAAGTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp CCCTTTCCATTAACACTGCCCCAACAGAACCTGCCTCAGACCAAGCTAAATGTGTCCGCACCCAGCAGTTaGGCCAGCCCAAAATCTGTG +
Preference number: 5 (lower is better)
Translates to: PFPLTLPQQNLPQTKLNVSAPSS*ASPKSV
Trigger: CACAGATTTTGGGCTGGCCAAACTGCTGGGTGCGGA...CACATTTAGCTTGGTCTGAGGCAGGTTCTGTTGGGGCAGTGTTAATGGAAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CAA 90 bp TGCAGTGGAAGCCTTGAAGCAGAACCACTGGAATCAAGCATCCTCTGGAAGACTTCCGCACCCAGCAGTTaGGCCAGCCCAAAATCTGTG +
Preference number: 5 (lower is better)
Translates to: CSGSLEAEPLESSILWKTSAPSS*ASPKSV
Trigger: CACAGATTTTGGGCTGGCCAAACTGCTGGGTGCGGA...AGTCTTCCAGAGGATGCTTGATTCCAGTGGTTCTGCTTCAAGGCTTCCACTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp TGCAGTGGAAGCCTTGAAGCAGAACCACTGGAATCAAGCATCCTCTGGAAGACTGAGCCAGCGGGCCTTTaGGGAACGGACTGGTTTATG +
Preference number: 5 (lower is better)
Translates to: CSGSLEAEPLESSILWKTEPAGL*GTDWFM
Trigger: CATAAACCAGTCCGTTCCCAAAAGGCCCGCTGGCTC...AGTCTTCCAGAGGATGCTTGATTCCAGTGGTTCTGCTTCAAGGCTTCCACTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp CAGCTGTGGGCTATTGGTCCAAATGCTGATGAATCCAATGTGGGCTGGAATCCGCTGTCGAATGTGCTGTaGACACAGGTGGGCTGGACA +
Preference number: 5 (lower is better)
Translates to: QLWAIGPNADESNVGWNPLSNVL*TQVGWT
Trigger: TGTCCAGCCCACCTGTGTCAACAGCACATTCGACAG...CGGATTCCAGCCCACATTGGATTCATCAGCATTTGGACCAATAGCCCACAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp CAGCTGTGGGCTATTGGTCCAAATGCTGATGAATCCAATGTGGGCTGGAATCCGGTTGTCCAGGCTAATTaGGTGGCTGCCTTTCTGGGC +
Preference number: 5 (lower is better)
Translates to: QLWAIGPNADESNVGWNPVVQAN*VAAFLG
Trigger: GCCCAGAAAGGCAGCCACCAAATTAGCCTGGACAAC...CGGATTCCAGCCCACATTGGATTCATCAGCATTTGGACCAATAGCCCACAGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp CCTGCTGTGGCTTGGTCCTGGGTATCGAAAGAGTCTGGATTTTTAGGGCTCATAGCTCCTTGCTCACAGTaGGGCCTGGATGAACTCAGG +
Preference number: 5 (lower is better)
Translates to: PAVAWSWVSKESGFLGLIAPCSQ*GLDELR
Trigger: CCTGAGTTCATCCAGGCCCAACTGTGAGCAAGGAGC...TATGAGCCCTAAAAATCCAGACTCTTTCGATACCCAGGACCAAGCCACAGCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp TGGAGGACCTGCTGTGGCTTGGTCCTGGGTATCGAAAGAGTCTGGATTTTTAGGCCCTCCGTTTCTTCTTaGCCCAGGAAGGGACAGAGT +
Preference number: 5 (lower is better)
Translates to: WRTCCGLVLGIERVWIFRPSVSS*PRKGQS
Trigger: ACTCTGTCCCTTCCTGGGCAAAGAAGAAACGGAGGG...CCTAAAAATCCAGACTCTTTCGATACCCAGGACCAAGCCACAGCAGGTCCTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp CTTAGAGGGAGCAGGTTGTTTAGGGTGACTGACCTCAGCCTTATGTGGACTTTACAAGGGCAGCCGCCCTaGAGAACCAGTGCCTTTCCT +
Preference number: 5 (lower is better)
Translates to: LRGSRLFRVTDLSLMWTLQGQPP*RTSAFP
Trigger: AGGAAAGGCACTGGTTCTCAAGGGCGGCTGCCCTTG...TAAAGTCCACATAAGGCTGAGGTCAGTCACCCTAAACAACCTGCTCCCTCTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CAA 90 bp AGTCTAAGGAAGAATTCCATCCCCTCCGTTTCTTCTTTGCCCAGGAAGGGACAGTGGCTGGGCCCAGGCTaGGTAAGACTGTTGGTGAAC +
Preference number: 5 (lower is better)
Translates to: SLRKNSIPSVSSLPRKGQWLGPG*VRLLVN
Trigger: GTTCACCAACAGTCTTACCAAGCCTGGGCCCAGCCA...CTGTCCCTTCCTGGGCAAAGAAGAAACGGAGGGGATGGAATTCTTCCTTAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS GCA 90 bp CATGAGATGCTCATTAGAGGGACTCTTCCCAATGGAAGCACAGACTaGAATTTGTACCTGAATGACAAGGTAGCGCTGGGGGTCTCGGGC +
Preference number: 5 (lower is better)
Translates to: HEMLIRGTLPNGSTD*NLYLNDKVALGVSG
Trigger: GCCCGAGACCCCCAGCGCTACCTTGTCATTCAGGTACAAATTGCAGTCTGTGCTTCCATTGGGAAGAGTCCCTCTAATGAGCATCTCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485503.1
CDS CCA 90 bp AATGCTAGGCCAAGTGCAACTGGTCAGGAATGCCATCCTGCATGCTaGCTGTTGCTCTTCTGGGCACTTAGAAAGTCCAGGCAAAGGATC +
Preference number: 5 (lower is better)
Translates to: NARPSATGQECHPAC*LLLFWALRKSRQRI
Trigger: GATCCTTTGCCTGGACTTTCTAAGTGCCCAGAAGAGCAACAGCCAGCATGCAGGATGGCATTCCTGACCAGTTGCACTTGGCCTAGCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459688.1
CDS-3UTR CAA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAAGCGGTGGTTGTGGCGTaGGCGGCGAGGCGGGGACTC +
Preference number: 5 (lower is better)
Translates to: EIVERKCSFSGRLKSDSEAVVVA*AARRGL
Trigger: GAGTCCCCGCCTCGCCGCCAACGCCACAACCACCGC...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR CAA 90 bp CAAACAAGTCAGTCTAACGCTCATGACTGGAAACCACTGGTCCATCAGTGGGGATCACCCTCCAGAAGGTaGCACTTGTCCACGCATTCC +
Preference number: 5 (lower is better)
Translates to: QTSQSNAHDWKPLVHQWGSPSRR*HLSTHS
Trigger: GGAATGCGTGGACAAGTGCAACCTTCTGGAGGGTGA...TCCCCACTGATGGACCAGTGGTTTCCAGTCATGAGCGTTAGACTGACTTGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp AGGGCTTTGCGGCTTCTACCAGACAGAACTGTGCCTCCCTGGACAGATGAAGTGTCGAGGATTTCCTTGTaGGCTTTCGGAGATGTTGCT +
Preference number: 5 (lower is better)
Translates to: RALRLLPDRTVPPWTDEVSRISL*AFGDVA
Trigger: AGCAACATCTCCGAAAGCCAACAAGGAAATCCTCGA...CACTTCATCTGTCCAGGGAGGCACAGTTCTGTCTGGTAGAAGCCGCAAAGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CAA 90 bp GAATTTGCCTCCAAGTCCATGTCCTTGTGGCTAATCCCTAGGCCAGTAGTTCTCATCTGCACACACCAGTaGAGCAGGTACTGGGAGCCA +
Preference number: 5 (lower is better)
Translates to: EFASKSMSLWLIPRPVVLICTHQ*SRYWEP
Trigger: TGGCTCCCAGTACCTGCTCAACTGGTGTGTGCAGAT...GAGAACTACTGGCCTAGGGATTAGCCACAAGGACATGGACTTGGAGGCAAATTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CAA 90 bp CCTGCTGTGGCTTGGTCCTGGGTATCGAAAGAGTCTGGATTTTTAGGGCTCATAATCTGCACACACCAGTaGAGCAGGTACTGGGAGCCA +
Preference number: 5 (lower is better)
Translates to: PAVAWSWVSKESGFLGLIICTHQ*SRYWEP
Trigger: TGGCTCCCAGTACCTGCTCAACTGGTGTGTGCAGAT...TATGAGCCCTAAAAATCCAGACTCTTTCGATACCCAGGACCAAGCCACAGCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp AGTCTAAGGAAGAATTCCATCCCCTCCGTTTCTTCTTTGCCCAGGAAGGGACAGGTTGTCCAGGCTAATTaGGTGGCTGCCTTTCTGGGC +
Preference number: 5 (lower is better)
Translates to: SLRKNSIPSVSSLPRKGQVVQAN*VAAFLG
Trigger: GCCCAGAAAGGCAGCCACCAAATTAGCCTGGACAAC...CTGTCCCTTCCTGGGCAAAGAAGAAACGGAGGGGATGGAATTCTTCCTTAGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp CCTGCTGTGGCTTGGTCCTGGGTATCGAAAGAGTCTGGATTTTTAGGGCTCATAAGGACCTGCTGTGGCTaGGTCCTGGGTATCGAAAGA +
Preference number: 5 (lower is better)
Translates to: PAVAWSWVSKESGFLGLIRTCCG*VLGIER
Trigger: TCTTTCGATACCCAGGACCAAGCCACAGCAGGTCCT...TATGAGCCCTAAAAATCCAGACTCTTTCGATACCCAGGACCAAGCCACAGCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp TGCAACTTCCCAAAATGTGCCCGAGGTGGAAGTACTTCCTGGCTAGTCGGTGTATCCAAGTCCATGTCCTaGTGGCTAATCCCTAGGCCA +
Preference number: 5 (lower is better)
Translates to: CNFPKCARGGSTSWLVGVSKSMS*WLIPRP
Trigger: TGGCCTAGGGATTAGCCACAAGGACATGGACTTGGA...TACACCGACTAGCCAGGAAGTACTTCCACCTCGGGCACATTTTGGGAAGTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CAA 90 bp CAAGATAGAGCCAGCAGAGAGAACAGGGATCAAATCTGTCACAAACACACACATGAGGGAGCACCTGGCTaGGACACTGGAGACTGGCTG +
Preference number: 5 (lower is better)
Translates to: QDRASRENRDQICHKHTHEGAPG*DTGDWL
Trigger: CAGCCAGTCTCCAGTGTCCAAGCCAGGTGCTCCCTC...ATGTGTGTGTTTGTGACAGATTTGATCCCTGTTCTCTCTGCTGGCTCTATCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS GCA 90 bp GGCCAAGTGCAACTGGTCAGGAATGCCATCCTGCATGCTGGCTGTTaGTCTTCTGGGCACTTAGAAAGTCCAGGCAAAGGATCATTAACT +
Preference number: 5 (lower is better)
Translates to: GQVQLVRNAILHAGC*SSGHLESPGKGSLT
Trigger: AGTTAATGATCCTTTGCCTGGACTTTCTAAGTGCCCAGAAGAGCAACAGCCAGCATGCAGGATGGCATTCCTGACCAGTTGCACTTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459688.1
CDS GCA 90 bp ACAGGGAGGCCAGGCTGGCATGTGACAGAACACAGTGACATGAGATaGTCATTAGAGGGACTCTTCCCAATGGAAGCACAGACTGCAATT +
Preference number: 5 (lower is better)
Translates to: TGRPGWHVTEHSDMR*SLEGLFPMEAQTAI
Trigger: AATTGCAGTCTGTGCTTCCATTGGGAAGAGTCCCTCTAATGAGCATCTCATGTCACTGTGTTCTGTCACATGCCAGCCTGGCCTCCCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485503.1
CDS CCA 90 bp GGATGGAGGACCTGCTGTGGCTTGGTCCTGGGTATCGAAAGAGTCTaGATTTTTAGGGCTCATACTATCCTCCGTGGTCATGCTCCAATA +
Preference number: 5 (lower is better)
Translates to: GWRTCCGLVLGIERV*IFRAHTILRGHAPI
Trigger: TATTGGAGCATGACCACGGAGGATAGTATGAGCCCTAAAAATCCAGACTCTTTCGATACCCAGGACCAAGCCACAGCAGGTCCTCCATCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp AGGGCTTTGCGGCTTCTACCAGACAGAACTGTGCCTCCCTGGACAGATGAAGTGCTTGTTACTCGTGCCTaGGCAAACTTTCTTTTCCTC +
Preference number: 5 (lower is better)
Translates to: RALRLLPDRTVPPWTDEVLVTRA*ANFLFL
Trigger: GAGGAAAAGAAAGTTTGCCAAGGCACGAGTAACAAG...CACTTCATCTGTCCAGGGAGGCACAGTTCTGTCTGGTAGAAGCCGCAAAGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CAA 90 bp TGCAACTTCCCAAAATGTGCCCGAGGTGGAAGTACTTCCTGGCTAGTCGGTGTAACCACCTCACAGTTATaGAACATCCTCTGGAGGCTG +
Preference number: 5 (lower is better)
Translates to: CNFPKCARGGSTSWLVGVTTSQL*NILWRL
Trigger: CAGCCTCCAGAGGATGTTCAATAACTGTGAGGTGGT...TACACCGACTAGCCAGGAAGTACTTCCACCTCGGGCACATTTTGGGAAGTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp CAGCTGTGGGCTATTGGTCCAAATGCTGATGAATCCAATGTGGGCTGGAATCCGACCACCTCACAGTTATaGAACATCCTCTGGAGGCTG +
Preference number: 5 (lower is better)
Translates to: QLWAIGPNADESNVGWNPTTSQL*NILWRL
Trigger: CAGCCTCCAGAGGATGTTCAATAACTGTGAGGTGGT...CGGATTCCAGCCCACATTGGATTCATCAGCATTTGGACCAATAGCCCACAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAACAGTCACTGGGGGACTaGCCACGGCAGCGCCCGGAG +
Preference number: 5 (lower is better)
Translates to: EIVERKCSFSGRLKSDSEQSLGD*PRQRPE
Trigger: CTCCGGGCGCTGCCGTGGCAAGTCCCCCAGTGACTG...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR CAA 90 bp ACACAGATGTACACACATCATGAACACTCACACACACAGATGTGTATGTCCGTGGCTTCGTCTCGGAATTaGCGGCAGACCAGGCAGTCG +
Preference number: 5 (lower is better)
Translates to: TQMYTHHEHSHTQMCMSVASSRN*RQTRQS
Trigger: CGACTGCCTGGTCTGCCGCAAATTCCGAGACGAAGC...CACGGACATACACATCTGTGTGTGTGAGTGTTCATGATGTGTGTACATCTGTGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CAA 90 bp CAGCTGTGGGCTATTGGTCCAAATGCTGATGAATCCAATGTGGGCTGGAATCCGAGAAAACTGACCATGTaGCTTGGTCCTGCCGCGTAT +
Preference number: 5 (lower is better)
Translates to: QLWAIGPNADESNVGWNPRKLTM*LGPAAY
Trigger: ATACGCGGCAGGACCAAGCAACATGGTCAGTTTTCT...CGGATTCCAGCCCACATTGGATTCATCAGCATTTGGACCAATAGCCCACAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp AACCAGACACAACAAAGAGCTTGTGCAGGCTCGGTCATGTGTTTATCTGCTCCTTCTCCACAAACTCCCTaGGCTCACCCTCCAGAAGGT +
Preference number: 5 (lower is better)
Translates to: NQTQQRACAGSVMCLSAPSPQTP*AHPPEG
Trigger: ACCTTCTGGAGGGTGAGCCAAGGGAGTTTGTGGAGA...AGGAGCAGATAAACACATGACCGAGCCTGCACAAGCTCTTTGTTGTGTCTGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CAA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAACCTGCCGGGCAGGTCTaGACGCAGTGGGGGCCGTCA +
Preference number: 5 (lower is better)
Translates to: EIVERKCSFSGRLKSDSEPAGQV*TQWGPS
Trigger: TGACGGCCCCCACTGCGTCAAGACCTGCCCGGCAGG...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR CAA 90 bp TGCAGTGGAAGCCTTGAAGCAGAACCACTGGAATCAAGCATCCTCTGGAAGACTGATCCTCAAGAGAGCTaGGTTGGGAGCTTCTCCACT +
Preference number: 5 (lower is better)
Translates to: CSGSLEAEPLESSILWKTDPQES*VGSFST
Trigger: AGTGGAGAAGCTCCCAACCAAGCTCTCTTGAGGATC...AGTCTTCCAGAGGATGCTTGATTCCAGTGGTTCTGCTTCAAGGCTTCCACTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp GTCAAGATAGAGCCAGCAGAGAGAACAGGGATCAAATCTGTCACAAACACACACTCCGCACCCAGCAGTTaGGCCAGCCCAAAATCTGTG +
Preference number: 5 (lower is better)
Translates to: VKIEPAERTGIKSVTNTHSAPSS*ASPKSV
Trigger: CACAGATTTTGGGCTGGCCAAACTGCTGGGTGCGGA...GTGTGTGTTTGTGACAGATTTGATCCCTGTTCTCTCTGCTGGCTCTATCTTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CAA 90 bp CAGCTGTGGGCTATTGGTCCAAATGCTGATGAATCCAATGTGGGCTGGAATCCGGGGTCTCGGGCCATTTaGGAGAATTCGATGATCAAC +
Preference number: 5 (lower is better)
Translates to: QLWAIGPNADESNVGWNPGSRAI*ENSMIN
Trigger: GTTGATCATCGAATTCTCCAAAATGGCCCGAGACCC...CGGATTCCAGCCCACATTGGATTCATCAGCATTTGGACCAATAGCCCACAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp TGGAGGACCTGCTGTGGCTTGGTCCTGGGTATCGAAAGAGTCTGGATTTTTAGGTGGAATTGTTGCTGGTaGCACTCAGAGAGCTCAGGA +
Preference number: 5 (lower is better)
Translates to: WRTCCGLVLGIERVWIFRWNCCW*HSESSG
Trigger: TCCTGAGCTCTCTGAGTGCAACCAGCAACAATTCCA...CCTAAAAATCCAGACTCTTTCGATACCCAGGACCAAGCCACAGCAGGTCCTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp TTTGATGTGTCATCCTCTCTTGCTGATTTCATGACAGCAAGACAGGGGCAGCATTGTGGCTTGTGCTCCTaGCTCACAGTTGGGCCTGGA +
Preference number: 5 (lower is better)
Translates to: FDVSSSLADFMTARQGQHCGLCS*LTVGPG
Trigger: TCCAGGCCCAACTGTGAGCAAGGAGCACAAGCCACA...ATGCTGCCCCTGTCTTGCTGTCATGAAATCAGCAAGAGAGGATGACACATCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp CCTGCTGTGGCTTGGTCCTGGGTATCGAAAGAGTCTGGATTTTTAGGGCTCATACATCCTCTGGAAGACTaGTGGCTTGTGCTCCTTGCT +
Preference number: 5 (lower is better)
Translates to: PAVAWSWVSKESGFLGLIHPLED*WLVLLA
Trigger: AGCAAGGAGCACAAGCCACAAGTCTTCCAGAGGATG...TATGAGCCCTAAAAATCCAGACTCTTTCGATACCCAGGACCAAGCCACAGCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp CTTAGAGGGAGCAGGTTGTTTAGGGTGACTGACCTCAGCCTTATGTGGACTTTACCCTCCGTTTCTTCTTaGCCCAGGAAGGGACAGAGT +
Preference number: 5 (lower is better)
Translates to: LRGSRLFRVTDLSLMWTLPSVSS*PRKGQS
Trigger: ACTCTGTCCCTTCCTGGGCAAAGAAGAAACGGAGGG...TAAAGTCCACATAAGGCTGAGGTCAGTCACCCTAAACAACCTGCTCCCTCTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CAA 90 bp CAAACAAGTCAGTCTAACGCTCATGACTGGAAACCACTGGTCCATCAGTGGGGACCCCCGAGATTTGGGTaGAATTGGTCTGCAGAGACT +
Preference number: 5 (lower is better)
Translates to: QTSQSNAHDWKPLVHQWGPPRFG*NWSAET
Trigger: AGTCTCTGCAGACCAATTCAACCCAAATCTCGGGGG...TCCCCACTGATGGACCAGTGGTTTCCAGTCATGAGCGTTAGACTGACTTGTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CAA 90 bp CCGCCCTTGAGAACCAGTGCCTTTCCTGCTAAGCAATCCATAGTCCCCTTATGTCAGATGTGGAGGTCTTaGTGTCTTAGCTCTCTAGGC +
Preference number: 5 (lower is better)
Translates to: PPLRTSAFPAKQSIVPLCQMWRS*CLSSLG
Trigger: GCCTAGAGAGCTAAGACACAAAGACCTCCACATCTG...ACATAAGGGGACTATGGATTGCTTAGCAGGAAAGGCACTGGTTCTCAAGGGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CAA 90 bp CCTGCTGTGGCTTGGTCCTGGGTATCGAAAGAGTCTGGATTTTTAGGGCTCATATCAGATAGGACAGACTaGCAGCCTCAGAGGACACAC +
Preference number: 5 (lower is better)
Translates to: PAVAWSWVSKESGFLGLISDRTD*QPQRTH
Trigger: GTGTGTCCTCTGAGGCTGCAAGTCTGTCCTATCTGA...TATGAGCCCTAAAAATCCAGACTCTTTCGATACCCAGGACCAAGCCACAGCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS TCA 90 bp CGACTGCAAGAGAAAACTGACCATGTTGCTTGGTCCTGCCGCGTATaGTTTCTAGGTTCTCAAAGGCATGGAGGTCCGTCCTGTTTTCAG +
Preference number: 5 (lower is better)
Translates to: RLQEKTDHVAWSCRV*FLGSQRHGGPSCFQ
Trigger: CTGAAAACAGGACGGACCTCCATGCCTTTGAGAACCTAGAAATCATACGCGGCAGGACCAAGCAACATGGTCAGTTTTCTCTTGCAGTCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000275493.7
ENST00000342916.7
ENST00000344576.7
ENST00000454757.6
ENST00000455089.5
CDS GCA 90 bp CCAGACACAACAAAGAGCTTGTGCAGGCTCGGTCATGTGTTTATCTaGTCCTTACGCCCTTCACTGTGTCTGCAAATCTGCCACTGTTTC +
Preference number: 5 (lower is better)
Translates to: PDTTKSLCRLGHVFI*SLRPSLCLQICHCF
Trigger: GAAACAGTGGCAGATTTGCAGACACAGTGAAGGGCGTAAGGAGCAGATAAACACATGACCGAGCCTGCACAAGCTCTTTGTTGTGTCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS GCA 90 bp GTGTCTGGGTGGGTGCATATAACTAAGGCGTCTTCACGTGGCTCTTaGTTTCACTTGGTAGGTTTTCAGGTTGAACAAGCTGAGGCAGGT +
Preference number: 5 (lower is better)
Translates to: VSGWVHITKASSRGS*FHLVGFQVEQAEAG
Trigger: ACCTGCCTCAGCTTGTTCAACCTGAAAACCTACCAAGTGAAAGCAAGAGCCACGTGAAGACGCCTTAGTTATATGCACCCACCCAGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459688.1
CDS-3UTR CAA 90 bp CAAACAACCAGACACAACAAAGAGCTTGTGCAGGCTCGGTCATGTGTTTATCTGCCCAACTGCGTGAGCTaGTTACTCGTGCCTTGGCAA +
Preference number: 5 (lower is better)
Translates to: QTTRHNKELVQARSCVYLPNCVS*LLVPWQ
Trigger: TTGCCAAGGCACGAGTAACAAGCTCACGCAGTTGGG...CAGATAAACACATGACCGAGCCTGCACAAGCTCTTTGTTGTGTCTGGTTGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CAA 90 bp CACAACAAAGAGCTTGTGCAGGCTCGGTCATGTGTTTATCTGCTCCTTACGCCCTGGGCACAGATGATTTaGGTCAGTTTCTGGCAGTTC +
Preference number: 5 (lower is better)
Translates to: HNKELVQARSCVYLLLTPWAQMI*VSFWQF
Trigger: GAACTGCCAGAAACTGACCAAAATCATCTGTGCCCA...GGGCGTAAGGAGCAGATAAACACATGACCGAGCCTGCACAAGCTCTTTGTTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CAA 90 bp CCTCAAATTAGGAGATACGTTTTTGCGAGAACAAAAGCGGTGCTATCCTTAGGTGCTTCGTCTCGGAATTaGCGGCAGACCAGGCAGTCG +
Preference number: 5 (lower is better)
Translates to: PQIRRYVFARTKAVLSLGASSRN*RQTRQS
Trigger: CGACTGCCTGGTCTGCCGCAAATTCCGAGACGAAGC...ACCTAAGGATAGCACCGCTTTTGTTCTCGCAAAAACGTATCTCCTAATTTGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp GAATTTGCCTCCAAGTCCATGTCCTTGTGGCTAATCCCTAGGCCAGTAGTTCTCCCATCACTTATCTCCTaGAGGGAGCGTAATCCCAAG +
Preference number: 5 (lower is better)
Translates to: EFASKSMSLWLIPRPVVLPSLIS*RERNPK
Trigger: CTTGGGATTACGCTCCCTCAAGGAGATAAGTGATGG...GAGAACTACTGGCCTAGGGATTAGCCACAAGGACATGGACTTGGAGGCAAATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CAA 90 bp ACACAGATGTACACACATCATGAACACTCACACACACAGATGTGTATGTCCGTGACCTGGCCTGTGGCCTaGCAGCTGTTTTCACCTCTG +
Preference number: 5 (lower is better)
Translates to: TQMYTHHEHSHTQMCMSVTWPVA*QLFSPL
Trigger: CAGAGGTGAAAACAGCTGCAAGGCCACAGGCCAGGT...CACGGACATACACATCTGTGTGTGTGAGTGTTCATGATGTGTGTACATCTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CAA 90 bp TGCAGTGGAAGCCTTGAAGCAGAACCACTGGAATCAAGCATCCTCTGGAAGACTTTCCAGACCAGGGTGTaGTTTTCTCCCATGACTCCT +
Preference number: 5 (lower is better)
Translates to: CSGSLEAEPLESSILWKTFQTRV*FSPMTP
Trigger: AGGAGTCATGGGAGAAAACAACACCCTGGTCTGGAA...AGTCTTCCAGAGGATGCTTGATTCCAGTGGTTCTGCTTCAAGGCTTCCACTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp CAAACAACCAGACACAACAAAGAGCTTGTGCAGGCTCGGTCATGTGTTTATCTGCTCAAGAGAGCTTGGTaGGGAGCTTCTCCACTGGGT +
Preference number: 5 (lower is better)
Translates to: QTTRHNKELVQARSCVYLLKRAW*GASPLG
Trigger: ACCCAGTGGAGAAGCTCCCAACCAAGCTCTCTTGAG...CAGATAAACACATGACCGAGCCTGCACAAGCTCTTTGTTGTGTCTGGTTGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CAA 90 bp AGTCTAAGGAAGAATTCCATCCCCTCCGTTTCTTCTTTGCCCAGGAAGGGACAGAGTAGTTCATGCCCTTaGCGATCTGCACACACCAGT +
Preference number: 5 (lower is better)
Translates to: SLRKNSIPSVSSLPRKGQSSSCP*RSAHTS
Trigger: ACTGGTGTGTGCAGATCGCAAAGGGCATGAACTACT...CTGTCCCTTCCTGGGCAAAGAAGAAACGGAGGGGATGGAATTCTTCCTTAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp CCAAAATGTGCCCGAGGTGGAAGTACTTCCTGGCTAGTCGGTGTAAACGTTGCACACTTGATAGGCACTTaGCCTCCTTCTGCATGGTAT +
Preference number: 5 (lower is better)
Translates to: PKCARGGSTSWLVGVNVAHLIGT*PPSAWY
Trigger: ATACCATGCAGAAGGAGGCAAAGTGCCTATCAAGTG...TGCAACGTTTACACCGACTAGCCAGGAAGTACTTCCACCTCGGGCACATTTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp CAAACAAGTCAGTCTAACGCTCATGACTGGAAACCACTGGTCCATCAGTGGGGAGGGTCTCGGGCCATTTaGGAGAATTCGATGATCAAC +
Preference number: 5 (lower is better)
Translates to: QTSQSNAHDWKPLVHQWGGSRAI*ENSMIN
Trigger: GTTGATCATCGAATTCTCCAAAATGGCCCGAGACCC...TCCCCACTGATGGACCAGTGGTTTCCAGTCATGAGCGTTAGACTGACTTGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp AGTCTAAGGAAGAATTCCATCCCCTCCGTTTCTTCTTTGCCCAGGAAGGGACAGAAGAAGCTGTCTTCCTaGATGGGACAGCTTTGCAGC +
Preference number: 5 (lower is better)
Translates to: SLRKNSIPSVSSLPRKGQKKLSS*MGQLCS
Trigger: GCTGCAAAGCTGTCCCATCAAGGAAGACAGCTTCTT...CTGTCCCTTCCTGGGCAAAGAAGAAACGGAGGGGATGGAATTCTTCCTTAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp CCTCAAATTAGGAGATACGTTTTTGCGAGAACAAAAGCGGTGCTATCCTTAGGTGTGGGCTGGACAGTGTaGAGATACTCGGGGTTGCCC +
Preference number: 5 (lower is better)
Translates to: PQIRRYVFARTKAVLSLGVGWTV*RYSGLP
Trigger: GGGCAACCCCGAGTATCTCAACACTGTCCAGCCCAC...ACCTAAGGATAGCACCGCTTTTGTTCTCGCAAAAACGTATCTCCTAATTTGAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp CTTAGAGGGAGCAGGTTGTTTAGGGTGACTGACCTCAGCCTTATGTGGACTTTACTTAGAGGGAGCAGGTaGTTTAGGGTGACTGACCTC +
Preference number: 5 (lower is better)
Translates to: LRGSRLFRVTDLSLMWTLLRGSR*FRVTDL
Trigger: GAGGTCAGTCACCCTAAACAACCTGCTCCCTCTAAG...TAAAGTCCACATAAGGCTGAGGTCAGTCACCCTAAACAACCTGCTCCCTCTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CAA 90 bp CAGCTGTGGGCTATTGGTCCAAATGCTGATGAATCCAATGTGGGCTGGAATCCGCAATTTCAACAGGTGTaGCCTACGTGGAATAGCAGC +
Preference number: 5 (lower is better)
Translates to: QLWAIGPNADESNVGWNPQFQQV*PTWNSS
Trigger: GCTGCTATTCCACGTAGGCAACACCTGTTGAAATTG...CGGATTCCAGCCCACATTGGATTCATCAGCATTTGGACCAATAGCCCACAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS TCA 90 bp CAGCAAATGCACAACCAGCCAGCAGCCCAGAGCTCCCTCTTGTTCTaGAGTCCAGTGGAGAACTGTTTTAGAGCTCATTCAAAAGGAGAT +
Preference number: 5 (lower is better)
Translates to: QQMHNQPAAQSSLLF*SPVENCFRAHSKGD
Trigger: ATCTCCTTTTGAATGAGCTCTAAAACAGTTCTCCACTGGACTTCAGAACAAGAGGGAGCTCTGGGCTGCTGGCTGGTTGTGCATTTGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000450046.1
CDS-3UTR CAA 90 bp CAGCTGTGGGCTATTGGTCCAAATGCTGATGAATCCAATGTGGGCTGGAATCCGCTTGTTACTCGTGCCTaGGCAAACTTTCTTTTCCTC +
Preference number: 5 (lower is better)
Translates to: QLWAIGPNADESNVGWNPLVTRA*ANFLFL
Trigger: GAGGAAAAGAAAGTTTGCCAAGGCACGAGTAACAAG...CGGATTCCAGCCCACATTGGATTCATCAGCATTTGGACCAATAGCCCACAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp AACCAGACACAACAAAGAGCTTGTGCAGGCTCGGTCATGTGTTTATCTGCTCCTACCACCTCACAGTTATaGAACATCCTCTGGAGGCTG +
Preference number: 5 (lower is better)
Translates to: NQTQQRACAGSVMCLSAPTTSQL*NILWRL
Trigger: CAGCCTCCAGAGGATGTTCAATAACTGTGAGGTGGT...AGGAGCAGATAAACACATGACCGAGCCTGCACAAGCTCTTTGTTGTGTCTGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CAA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAACACAGGGCAGGGTTGTaGCTGAACCGCACGGCGCCA +
Preference number: 5 (lower is better)
Translates to: EIVERKCSFSGRLKSDSEHRAGL*LNRTAP
Trigger: TGGCGCCGTGCGGTTCAGCAACAACCCTGCCCTGTG...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR CAA 90 bp TGCAGTGGAAGCCTTGAAGCAGAACCACTGGAATCAAGCATCCTCTGGAAGACTTGGGCACAGATGATTTaGGTCAGTTTCTGGCAGTTC +
Preference number: 5 (lower is better)
Translates to: CSGSLEAEPLESSILWKTWAQMI*VSFWQF
Trigger: GAACTGCCAGAAACTGACCAAAATCATCTGTGCCCA...AGTCTTCCAGAGGATGCTTGATTCCAGTGGTTCTGCTTCAAGGCTTCCACTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp CAAGATAGAGCCAGCAGAGAGAACAGGGATCAAATCTGTCACAAACACACACATTCCAGAAGGTTGCACTaGTCCACGCATTCCCTGCCT +
Preference number: 5 (lower is better)
Translates to: QDRASRENRDQICHKHTHSRRLH*STHSLP
Trigger: AGGCAGGGAATGCGTGGACAAGTGCAACCTTCTGGA...ATGTGTGTGTTTGTGACAGATTTGATCCCTGTTCTCTCTGCTGGCTCTATCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CAA 90 bp ATTGGAATGACCTCAGGAGCTTTAAAAACTACGAATGCTTGGGTTTCAGCCCCACTCAAGAGAGCTTGGTaGGGAGCTTCTCCACTGGGT +
Preference number: 5 (lower is better)
Translates to: IGMTSGALKTTNAWVSAPLKRAW*GASPLG
Trigger: ACCCAGTGGAGAAGCTCCCAACCAAGCTCTCTTGAG...TGGGGCTGAAACCCAAGCATTCGTAGTTTTTAAAGCTCCTGAGGTCATTCCAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CAA 90 bp AGGGCTTTGCGGCTTCTACCAGACAGAACTGTGCCTCCCTGGACAGATGAAGTGGCTTCTCTTAATTCCTaGATAGCGACGGGAATTTTA +
Preference number: 5 (lower is better)
Translates to: RALRLLPDRTVPPWTDEVASLNS*IATGIL
Trigger: TAAAATTCCCGTCGCTATCAAGGAATTAAGAGAAGC...CACTTCATCTGTCCAGGGAGGCACAGTTCTGTCTGGTAGAAGCCGCAAAGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CAA 90 bp TGCAGTGGAAGCCTTGAAGCAGAACCACTGGAATCAAGCATCCTCTGGAAGACTTCGAGGATTTCCTTGTaGGCTTTCGGAGATGTTGCT +
Preference number: 5 (lower is better)
Translates to: CSGSLEAEPLESSILWKTSRISL*AFGDVA
Trigger: AGCAACATCTCCGAAAGCCAACAAGGAAATCCTCGA...AGTCTTCCAGAGGATGCTTGATTCCAGTGGTTCTGCTTCAAGGCTTCCACTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp ACACAGATGTACACACATCATGAACACTCACACACACAGATGTGTATGTCCGTGATCTGCACACACCAGTaGAGCAGGTACTGGGAGCCA +
Preference number: 5 (lower is better)
Translates to: TQMYTHHEHSHTQMCMSVICTHQ*SRYWEP
Trigger: TGGCTCCCAGTACCTGCTCAACTGGTGTGTGCAGAT...CACGGACATACACATCTGTGTGTGTGAGTGTTCATGATGTGTGTACATCTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CAA 90 bp CAGCTGTGGGCTATTGGTCCAAATGCTGATGAATCCAATGTGGGCTGGAATCCGATTCCGTCATATGGCTaGGATCCAAAGGTCATCAAC +
Preference number: 5 (lower is better)
Translates to: QLWAIGPNADESNVGWNPIPSYG*DPKVIN
Trigger: GTTGATGACCTTTGGATCCAAGCCATATGACGGAAT...CGGATTCCAGCCCACATTGGATTCATCAGCATTTGGACCAATAGCCCACAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp CCCTTTCCATTAACACTGCCCCAACAGAACCTGCCTCAGACCAAGCTAAATGTGAAGATGCCATTTGGCTaGGCTTCCTTGGGAAAGAAG +
Preference number: 5 (lower is better)
Translates to: PFPLTLPQQNLPQTKLNVKMPFG*ASLGKK
Trigger: CTTCTTTCCCAAGGAAGCCAAGCCAAATGGCATCTT...CACATTTAGCTTGGTCTGAGGCAGGTTCTGTTGGGGCAGTGTTAATGGAAAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CAA 90 bp TGCAACTTCCCAAAATGTGCCCGAGGTGGAAGTACTTCCTGGCTAGTCGGTGTACAAGCTTCTTCCTTGTaGGAAGAGCCCATTGAAGTA +
Preference number: 5 (lower is better)
Translates to: CNFPKCARGGSTSWLVGVQASSL*EEPIEV
Trigger: TACTTCAATGGGCTCTTCCAACAAGGAAGAAGCTTG...TACACCGACTAGCCAGGAAGTACTTCCACCTCGGGCACATTTTGGGAAGTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp TGCAGTGGAAGCCTTGAAGCAGAACCACTGGAATCAAGCATCCTCTGGAAGACTCTCAGCTGTGGGCTATaGGTCCAAATGCTGATGAAT +
Preference number: 5 (lower is better)
Translates to: CSGSLEAEPLESSILWKTLSCGL*VQMLMN
Trigger: ATTCATCAGCATTTGGACCAATAGCCCACAGCTGAG...AGTCTTCCAGAGGATGCTTGATTCCAGTGGTTCTGCTTCAAGGCTTCCACTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp AGTCTAAGGAAGAATTCCATCCCCTCCGTTTCTTCTTTGCCCAGGAAGGGACAGCTCAGCTGTGGGCTATaGGTCCAAATGCTGATGAAT +
Preference number: 5 (lower is better)
Translates to: SLRKNSIPSVSSLPRKGQLSCGL*VQMLMN
Trigger: ATTCATCAGCATTTGGACCAATAGCCCACAGCTGAG...CTGTCCCTTCCTGGGCAAAGAAGAAACGGAGGGGATGGAATTCTTCCTTAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp CCGCCCTTGAGAACCAGTGCCTTTCCTGCTAAGCAATCCATAGTCCCCTTATGTTTAGGAGATACGTTTTaGCGAGAACAAAAGCGGTGC +
Preference number: 5 (lower is better)
Translates to: PPLRTSAFPAKQSIVPLCLGDTF*REQKRC
Trigger: GCACCGCTTTTGTTCTCGCAAAAACGTATCTCCTAA...ACATAAGGGGACTATGGATTGCTTAGCAGGAAAGGCACTGGTTCTCAAGGGCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CAA 90 bp ATAACTTACTTAGAGAATGCAGAGGGTCCCAGGGCGTTTTCAAAGCTCAGGTGGCCACAGTCTTTCTGGTaGGGACCAGAAGATTCCCAA +
Preference number: 5 (lower is better)
Translates to: ITYLENAEGPRAFSKLRWPQSFW*GPEDSQ
Trigger: TTGGGAATCTTCTGGTCCCAACCAGAAAGACTGTGG...CCACCTGAGCTTTGAAAACGCCCTGGGACCCTCTGCATTCTCTAAGTAAGTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CAA 90 bp TGGAGGACCTGCTGTGGCTTGGTCCTGGGTATCGAAAGAGTCTGGATTTTTAGGGGGTTTCAACCCTGGTaGCCCATTAGAATCATGAAA +
Preference number: 5 (lower is better)
Translates to: WRTCCGLVLGIERVWIFRGFQPW*PIRIMK
Trigger: TTTCATGATTCTAATGGGCAACCAGGGTTGAAACCC...CCTAAAAATCCAGACTCTTTCGATACCCAGGACCAAGCCACAGCAGGTCCTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CAA 90 bp AGTCTAAGGAAGAATTCCATCCCCTCCGTTTCTTCTTTGCCCAGGAAGGGACAGACTCTGTTCAGGTTCTaGACTCTCAGCGACAGATGT +
Preference number: 5 (lower is better)
Translates to: SLRKNSIPSVSSLPRKGQTLFRF*TLSDRC
Trigger: ACATCTGTCGCTGAGAGTCAAGAACCTGAACAGAGT...CTGTCCCTTCCTGGGCAAAGAAGAAACGGAGGGGATGGAATTCTTCCTTAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CAA 90 bp AGGGCTTTGCGGCTTCTACCAGACAGAACTGTGCCTCCCTGGACAGATGAAGTGTTTGCTTTTCAACCATaGTTTAGACACTCTCCCTTC +
Preference number: 5 (lower is better)
Translates to: RALRLLPDRTVPPWTDEVFAFQP*FRHSPF
Trigger: GAAGGGAGAGTGTCTAAACAATGGTTGAAAAGCAAA...CACTTCATCTGTCCAGGGAGGCACAGTTCTGTCTGGTAGAAGCCGCAAAGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CAA 90 bp GCAAACAACCAGACACAACAAAGAGCTTGTGCAGGCTCGGTCATGTGTTTATCTTCCCATTGGGACAGCTaGGATCACACTTTTGGCCCT +
Preference number: 5 (lower is better)
Translates to: ANNQTQQRACAGSVMCLSSHWDS*DHTFGP
Trigger: AGGGCCAAAAGTGTGATCCAAGCTGTCCCAATGGGA...AGATAAACACATGACCGAGCCTGCACAAGCTCTTTGTTGTGTCTGGTTGTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CAA 90 bp GTCAAGATAGAGCCAGCAGAGAGAACAGGGATCAAATCTGTCACAAACACACACGACACAACAAAGAGCTaGTGCAGGCTCGGTCATGTG +
Preference number: 5 (lower is better)
Translates to: VKIEPAERTGIKSVTNTHDTTKS*CRLGHV
Trigger: CACATGACCGAGCCTGCACAAGCTCTTTGTTGTGTC...GTGTGTGTTTGTGACAGATTTGATCCCTGTTCTCTCTGCTGGCTCTATCTTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS TCA 90 bp AGGACCACCTCACAGTTATTGAACATCCTCTGGAGGCTGAGAAAATaGTCTTCAAAAGTGCCCAACTGCGTGAGCTTGTTACTCGTGCCT +
Preference number: 5 (lower is better)
Translates to: RTTSQLLNILWRLRK*SSKVPNCVSLLLVP
Trigger: AGGCACGAGTAACAAGCTCACGCAGTTGGGCACTTTTGAAGATCATTTTCTCAGCCTCCAGAGGATGTTCAATAACTGTGAGGTGGTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000275493.7
ENST00000342916.7
ENST00000344576.7
ENST00000420316.6
ENST00000450046.1
ENST00000454757.6
ENST00000455089.5
CDS-3UTR CAA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAATTGCACAGGGCAGGGTaGTTGCTGAACCGCACGGCG +
Preference number: 5 (lower is better)
Translates to: EIVERKCSFSGRLKSDSELHRAG*LLNRTA
Trigger: CGCCGTGCGGTTCAGCAACAACCCTGCCCTGTGCAA...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR CAA 90 bp AGTCACAACATCAAGAACTTTCAGCAAACACCTAAGCTTTGGTGTCATCAGCTGGCTTGGATCACACTTTaGGCAGCTGCCCAGGTGGTT +
Preference number: 5 (lower is better)
Translates to: SHNIKNFQQTPKLWCHQLAWITL*AAAQVV
Trigger: AACCACCTGGGCAGCTGCCAAAAGTGTGATCCAAGC...CAGCTGATGACACCAAAGCTTAGGTGTTTGCTGAAAGTTCTTGATGTTGTGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CAA 90 bp CCTCAAATTAGGAGATACGTTTTTGCGAGAACAAAAGCGGTGCTATCCTTAGGTGCACCAAAGCTGTATTaGCCCTCGGGGTTCACATCC +
Preference number: 5 (lower is better)
Translates to: PQIRRYVFARTKAVLSLGAPKLY*PSGFTS
Trigger: GGATGTGAACCCCGAGGGCAAATACAGCTTTGGTGC...ACCTAAGGATAGCACCGCTTTTGTTCTCGCAAAAACGTATCTCCTAATTTGAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp TTATTATTTGATGTGTCATCCTCTCTTGCTGATTTCATGACAGCAAGACAGGGGTCGCACTTCTTACACTaGCGGACGCCGTCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: LLFDVSSSLADFMTARQGSHFLH*RTPSSS
Trigger: GGAGGAAGACGGCGTCCGCAAGTGTAAGAAGTGCGA...CCCCTGTCTTGCTGTCATGAAATCAGCAAGAGAGGATGACACATCAAATAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp AGAGAGAACAGGGATCAAATCTGTCACAAACACACACATACACACACACACATATCGCACTTCTTACACTaGCGGACGCCGTCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: RENRDQICHKHTHTHTHISHFLH*RTPSSS
Trigger: GGAGGAAGACGGCGTCCGCAAGTGTAAGAAGTGCGA...TATGTGTGTGTGTGTATGTGTGTGTTTGTGACAGATTTGATCCCTGTTCTCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CAA 90 bp AGTCACAACATCAAGAACTTTCAGCAAACACCTAAGCTTTGGTGTCATCAGCTGTCCAGAAGGTTGCACTaGTCCACGCATTCCCTGCCT +
Preference number: 5 (lower is better)
Translates to: SHNIKNFQQTPKLWCHQLSRRLH*STHSLP
Trigger: AGGCAGGGAATGCGTGGACAAGTGCAACCTTCTGGA...CAGCTGATGACACCAAAGCTTAGGTGTTTGCTGAAAGTTCTTGATGTTGTGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CAA 90 bp GCAAACAACCAGACACAACAAAGAGCTTGTGCAGGCTCGGTCATGTGTTTATCTTTCCAGACCAGGGTGTaGTTTTCTCCCATGACTCCT +
Preference number: 5 (lower is better)
Translates to: ANNQTQQRACAGSVMCLSFQTRV*FSPMTP
Trigger: AGGAGTCATGGGAGAAAACAACACCCTGGTCTGGAA...AGATAAACACATGACCGAGCCTGCACAAGCTCTTTGTTGTGTCTGGTTGTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CAA 90 bp GTAAATGCTTCACAGTTTGAAGACAAAGGAATGCAACTTCCCAAAATGTGCCCGCTCAAGAGAGCTTGGTaGGGAGCTTCTCCACTGGGT +
Preference number: 5 (lower is better)
Translates to: VNASQFEDKGMQLPKMCPLKRAW*GASPLG
Trigger: ACCCAGTGGAGAAGCTCCCAACCAAGCTCTCTTGAG...CGGGCACATTTTGGGAAGTTGCATTCCTTTGTCTTCAAACTGTGAAGCATTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp ATTGGAATGACCTCAGGAGCTTTAAAAACTACGAATGCTTGGGTTTCAGCCCCAGATCCTCAAGAGAGCTaGGTTGGGAGCTTCTCCACT +
Preference number: 5 (lower is better)
Translates to: IGMTSGALKTTNAWVSAPDPQES*VGSFST
Trigger: AGTGGAGAAGCTCCCAACCAAGCTCTCTTGAGGATC...TGGGGCTGAAACCCAAGCATTCGTAGTTTTTAAAGCTCCTGAGGTCATTCCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CAA 90 bp ACACAGATGTACACACATCATGAACACTCACACACACAGATGTGTATGTCCGTGGATCCTCAAGAGAGCTaGGTTGGGAGCTTCTCCACT +
Preference number: 5 (lower is better)
Translates to: TQMYTHHEHSHTQMCMSVDPQES*VGSFST
Trigger: AGTGGAGAAGCTCCCAACCAAGCTCTCTTGAGGATC...CACGGACATACACATCTGTGTGTGTGAGTGTTCATGATGTGTGTACATCTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CAA 90 bp TGCAGTGGAAGCCTTGAAGCAGAACCACTGGAATCAAGCATCCTCTGGAAGACTCCGGAGCCCAGCACTTaGATCTTTTTGAATTCAGTT +
Preference number: 5 (lower is better)
Translates to: CSGSLEAEPLESSILWKTPEPST*IFLNSV
Trigger: AACTGAATTCAAAAAGATCAAAGTGCTGGGCTCCGG...AGTCTTCCAGAGGATGCTTGATTCCAGTGGTTCTGCTTCAAGGCTTCCACTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp AACCAGACACAACAAAGAGCTTGTGCAGGCTCGGTCATGTGTTTATCTGCTCCTTACTGGGAGCCAATATaGTCTTTGTGTTCCCGGACA +
Preference number: 5 (lower is better)
Translates to: NQTQQRACAGSVMCLSAPYWEPI*SLCSRT
Trigger: TGTCCGGGAACACAAAGACAATATTGGCTCCCAGTA...AGGAGCAGATAAACACATGACCGAGCCTGCACAAGCTCTTTGTTGTGTCTGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CAA 90 bp GCAAACAACCAGACACAACAAAGAGCTTGTGCAGGCTCGGTCATGTGTTTATCTTGGAATTGTTGCTGGTaGCACTCAGAGAGCTCAGGA +
Preference number: 5 (lower is better)
Translates to: ANNQTQQRACAGSVMCLSWNCCW*HSESSG
Trigger: TCCTGAGCTCTCTGAGTGCAACCAGCAACAATTCCA...AGATAAACACATGACCGAGCCTGCACAAGCTCTTTGTTGTGTCTGGTTGTTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CAA 90 bp CAAGATAGAGCCAGCAGAGAGAACAGGGATCAAATCTGTCACAAACACACACATCAAGCCACGGTGGAATaGTTGCTGGTTGCACTCAGA +
Preference number: 5 (lower is better)
Translates to: QDRASRENRDQICHKHTHQATVE*LLVALR
Trigger: TCTGAGTGCAACCAGCAACAATTCCACCGTGGCTTG...ATGTGTGTGTTTGTGACAGATTTGATCCCTGTTCTCTCTGCTGGCTCTATCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CAA 90 bp TGCAGTGGAAGCCTTGAAGCAGAACCACTGGAATCAAGCATCCTCTGGAAGACTCTTGATGGGACAGCTTaGCAGCCCATTTCTATCAAT +
Preference number: 5 (lower is better)
Translates to: CSGSLEAEPLESSILWKTLDGTA*QPISIN
Trigger: ATTGATAGAAATGGGCTGCAAAGCTGTCCCATCAAG...AGTCTTCCAGAGGATGCTTGATTCCAGTGGTTCTGCTTCAAGGCTTCCACTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp TTCTGCTCAAAGGGACAATATTCTTGCTGGATGCGTTTCTGTAAATGCTTCACATGTGGCTTGTGCTCCTaGCTCACAGTTGGGCCTGGA +
Preference number: 5 (lower is better)
Translates to: FCSKGQYSCWMRFCKCFTCGLCS*LTVGPG
Trigger: TCCAGGCCCAACTGTGAGCAAGGAGCACAAGCCACA...TGTGAAGCATTTACAGAAACGCATCCAGCAAGAATATTGTCCCTTTGAGCAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp CCCTTTCCATTAACACTGCCCCAACAGAACCTGCCTCAGACCAAGCTAAATGTGAAAAACTACGAATGCTaGGGTTTCAGCCCCAGAGAT +
Preference number: 5 (lower is better)
Translates to: PFPLTLPQQNLPQTKLNVKNYEC*GFSPRD
Trigger: ATCTCTGGGGCTGAAACCCAAGCATTCGTAGTTTTT...CACATTTAGCTTGGTCTGAGGCAGGTTCTGTTGGGGCAGTGTTAATGGAAAGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CAA 90 bp AGGGCTTTGCGGCTTCTACCAGACAGAACTGTGCCTCCCTGGACAGATGAAGTGACAGCAAGATTATTTTaGTGGCCAAATCAGGTCATA +
Preference number: 5 (lower is better)
Translates to: RALRLLPDRTVPPWTDEVTARLF*WPNQVI
Trigger: TATGACCTGATTTGGCCACAAAAATAATCTTGCTGT...CACTTCATCTGTCCAGGGAGGCACAGTTCTGTCTGGTAGAAGCCGCAAAGCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CAA 90 bp AACCAGACACAACAAAGAGCTTGTGCAGGCTCGGTCATGTGTTTATCTGCTCCTCTTGTTACTCGTGCCTaGGCAAACTTTCTTTTCCTC +
Preference number: 5 (lower is better)
Translates to: NQTQQRACAGSVMCLSAPLVTRA*ANFLFL
Trigger: GAGGAAAAGAAAGTTTGCCAAGGCACGAGTAACAAG...AGGAGCAGATAAACACATGACCGAGCCTGCACAAGCTCTTTGTTGTGTCTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CAA 90 bp TTCTGCTCAAAGGGACAATATTCTTGCTGGATGCGTTTCTGTAAATGCTTCACACCCAACTGCGTGAGCTaGTTACTCGTGCCTTGGCAA +
Preference number: 5 (lower is better)
Translates to: FCSKGQYSCWMRFCKCFTPNCVS*LLVPWQ
Trigger: TTGCCAAGGCACGAGTAACAAGCTCACGCAGTTGGG...TGTGAAGCATTTACAGAAACGCATCCAGCAAGAATATTGTCCCTTTGAGCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp AGTCACAACATCAAGAACTTTCAGCAAACACCTAAGCTTTGGTGTCATCAGCTGTCCCATTGGGACAGCTaGGATCACACTTTTGGCAGC +
Preference number: 5 (lower is better)
Translates to: SHNIKNFQQTPKLWCHQLSHWDS*DHTFGS
Trigger: GCTGCCAAAAGTGTGATCCAAGCTGTCCCAATGGGA...CAGCTGATGACACCAAAGCTTAGGTGTTTGCTGAAAGTTCTTGATGTTGTGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CAA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAACCCCAGCAGCTCCCATaGGGACAGCTTGGATCACAC +
Preference number: 5 (lower is better)
Translates to: EIVERKCSFSGRLKSDSEPQQLP*GQLGSH
Trigger: GTGTGATCCAAGCTGTCCCAATGGGAGCTGCTGGGG...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR CAA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAAGCTTCGTCTCGGAATTaGCGGCAGACCAGGCAGTCG +
Preference number: 5 (lower is better)
Translates to: EIVERKCSFSGRLKSDSEASSRN*RQTRQS
Trigger: CGACTGCCTGGTCTGCCGCAAATTCCGAGACGAAGC...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR CAA 90 bp AGAGAGAACAGGGATCAAATCTGTCACAAACACACACATACACACACACACATAGCACCAAAGCTGTATTaGCCCTCGGGGTTCACATCC +
Preference number: 5 (lower is better)
Translates to: RENRDQICHKHTHTHTHIAPKLY*PSGFTS
Trigger: GGATGTGAACCCCGAGGGCAAATACAGCTTTGGTGC...TATGTGTGTGTGTGTATGTGTGTGTTTGTGACAGATTTGATCCCTGTTCTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CAA 90 bp CTACCTGAATTCCACACTACTCATAATGCTACTGTCATTCGCACCTGTAAAATGATTCCGTTACACACTTaGCGGCAAGGCCCTTCGCAC +
Preference number: 5 (lower is better)
Translates to: LPEFHTTHNATVIRTCKMIPLHT*RQGPSH
Trigger: GTGCGAAGGGCCTTGCCGCAAAGTGTGTAACGGAAT...CATTTTACAGGTGCGAATGACAGTAGCATTATGAGTAGTGTGGAATTCAGGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp AGAGAGAACAGGGATCAAATCTGTCACAAACACACACATACACACACACACATAATTCCGTTACACACTTaGCGGCAAGGCCCTTCGCAC +
Preference number: 5 (lower is better)
Translates to: RENRDQICHKHTHTHTHIIPLHT*RQGPSH
Trigger: GTGCGAAGGGCCTTGCCGCAAAGTGTGTAACGGAAT...TATGTGTGTGTGTGTATGTGTGTGTTTGTGACAGATTTGATCCCTGTTCTCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CAA 90 bp ACACAGATGTACACACATCATGAACACTCACACACACAGATGTGTATGTCCGTGCCATCACTTATCTCCTaGAGGGAGCGTAATCCCAAG +
Preference number: 5 (lower is better)
Translates to: TQMYTHHEHSHTQMCMSVPSLIS*RERNPK
Trigger: CTTGGGATTACGCTCCCTCAAGGAGATAAGTGATGG...CACGGACATACACATCTGTGTGTGTGAGTGTTCATGATGTGTGTACATCTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CAA 90 bp TTCTGCTCAAAGGGACAATATTCTTGCTGGATGCGTTTCTGTAAATGCTTCACATCCAGAAGGTTGCACTaGTCCACGCATTCCCTGCCT +
Preference number: 5 (lower is better)
Translates to: FCSKGQYSCWMRFCKCFTSRRLH*STHSLP
Trigger: AGGCAGGGAATGCGTGGACAAGTGCAACCTTCTGGA...TGTGAAGCATTTACAGAAACGCATCCAGCAAGAATATTGTCCCTTTGAGCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp CTACCTGAATTCCACACTACTCATAATGCTACTGTCATTCGCACCTGTAAAATGTCTCCACAAACTCCCTaGGCTCACCCTCCAGAAGGT +
Preference number: 5 (lower is better)
Translates to: LPEFHTTHNATVIRTCKMSPQTP*AHPPEG
Trigger: ACCTTCTGGAGGGTGAGCCAAGGGAGTTTGTGGAGA...CATTTTACAGGTGCGAATGACAGTAGCATTATGAGTAGTGTGGAATTCAGGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp TTTGATGTGTCATCCTCTCTTGCTGATTTCATGACAGCAAGACAGGGGCAGCATTACTGGGAGCCAATATaGTCTTTGTGTTCCCGGACA +
Preference number: 5 (lower is better)
Translates to: FDVSSSLADFMTARQGQHYWEPI*SLCSRT
Trigger: TGTCCGGGAACACAAAGACAATATTGGCTCCCAGTA...ATGCTGCCCCTGTCTTGCTGTCATGAAATCAGCAAGAGAGGATGACACATCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp GCAAACAACCAGACACAACAAAGAGCTTGTGCAGGCTCGGTCATGTGTTTATCTCACTTGATAGGCACTTaGCCTCCTTCTGCATGGTAT +
Preference number: 5 (lower is better)
Translates to: ANNQTQQRACAGSVMCLSHLIGT*PPSAWY
Trigger: ATACCATGCAGAAGGAGGCAAAGTGCCTATCAAGTG...AGATAAACACATGACCGAGCCTGCACAAGCTCTTTGTTGTGTCTGGTTGTTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CAA 90 bp TTCTGCTCAAAGGGACAATATTCTTGCTGGATGCGTTTCTGTAAATGCTTCACAGCCACGGTGGAATTGTaGCTGGTTGCACTCAGAGAG +
Preference number: 5 (lower is better)
Translates to: FCSKGQYSCWMRFCKCFTATVEL*LVALRE
Trigger: CTCTCTGAGTGCAACCAGCAACAATTCCACCGTGGC...TGTGAAGCATTTACAGAAACGCATCCAGCAAGAATATTGTCCCTTTGAGCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp AGAGAGAACAGGGATCAAATCTGTCACAAACACACACATACACACACACACATAGCCACGGTGGAATTGTaGCTGGTTGCACTCAGAGAG +
Preference number: 5 (lower is better)
Translates to: RENRDQICHKHTHTHTHIATVEL*LVALRE
Trigger: CTCTCTGAGTGCAACCAGCAACAATTCCACCGTGGC...TATGTGTGTGTGTGTATGTGTGTGTTTGTGACAGATTTGATCCCTGTTCTCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CAA 90 bp GTAAATGCTTCACAGTTTGAAGACAAAGGAATGCAACTTCCCAAAATGTGCCCGCAAGCCACGGTGGAATaGTTGCTGGTTGCACTCAGA +
Preference number: 5 (lower is better)
Translates to: VNASQFEDKGMQLPKMCPQATVE*LLVALR
Trigger: TCTGAGTGCAACCAGCAACAATTCCACCGTGGCTTG...CGGGCACATTTTGGGAAGTTGCATTCCTTTGTCTTCAAACTGTGAAGCATTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp CTACCTGAATTCCACACTACTCATAATGCTACTGTCATTCGCACCTGTAAAATGCTGTCGAATGTGCTGTaGACACAGGTGGGCTGGACA +
Preference number: 5 (lower is better)
Translates to: LPEFHTTHNATVIRTCKMLSNVL*TQVGWT
Trigger: TGTCCAGCCCACCTGTGTCAACAGCACATTCGACAG...CATTTTACAGGTGCGAATGACAGTAGCATTATGAGTAGTGTGGAATTCAGGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp CTACCTGAATTCCACACTACTCATAATGCTACTGTCATTCGCACCTGTAAAATGAGGACCTGCTGTGGCTaGGTCCTGGGTATCGAAAGA +
Preference number: 5 (lower is better)
Translates to: LPEFHTTHNATVIRTCKMRTCCG*VLGIER
Trigger: TCTTTCGATACCCAGGACCAAGCCACAGCAGGTCCT...CATTTTACAGGTGCGAATGACAGTAGCATTATGAGTAGTGTGGAATTCAGGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp TGCAACTTCCCAAAATGTGCCCGAGGTGGAAGTACTTCCTGGCTAGTCGGTGTATTCTTCCTTGATAAATaGGATGGGGTGGATATTGAC +
Preference number: 5 (lower is better)
Translates to: CNFPKCARGGSTSWLVGVFFLDK*DGVDID
Trigger: GTCAATATCCACCCCATCCAATTTATCAAGGAAGAA...TACACCGACTAGCCAGGAAGTACTTCCACCTCGGGCACATTTTGGGAAGTTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp GCTAGAAATTTTGCAGATTCATTCTTACAACAGAGGTACAGCAAACAACCAGACAGTGGGTCGAGGAGGTaGAGGAGCAGGACTGTTTCC +
Preference number: 5 (lower is better)
Translates to: ARNFADSFLQQRYSKQPDSGSRR*RSRTVS
Trigger: GGAAACAGTCCTGCTCCTCAACCTCCTCGACCCACT...GTCTGGTTGTTTGCTGTACCTCTGTTGTAAGAATGAATCTGCAAAATTTCTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CAA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAATGGATGCTCTCCACGTaGCACAGGGCAGGGTTGTTG +
Preference number: 5 (lower is better)
Translates to: EIVERKCSFSGRLKSDSEWMLST*HRAGLL
Trigger: CAACAACCCTGCCCTGTGCAACGTGGAGAGCATCCA...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR CAA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAATCGCACTTCTTACACTaGCGGACGCCGTCTTCCTCC +
Preference number: 5 (lower is better)
Translates to: EIVERKCSFSGRLKSDSESHFLH*RTPSSS
Trigger: GGAGGAAGACGGCGTCCGCAAGTGTAAGAAGTGCGA...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR CAA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAAACCTGGCCTGTGGCCTaGCAGCTGTTTTCACCTCTG +
Preference number: 5 (lower is better)
Translates to: EIVERKCSFSGRLKSDSETWPVA*QLFSPL
Trigger: CAGAGGTGAAAACAGCTGCAAGGCCACAGGCCAGGT...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR CAA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAAGCACACTGGATACAGTaGTCTGGTCCCCGTCCTGTG +
Preference number: 5 (lower is better)
Translates to: EIVERKCSFSGRLKSDSEAHWIQ*SGPRPV
Trigger: CACAGGACGGGGACCAGACAACTGTATCCAGTGTGC...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR CAA 90 bp CCTCAAATTAGGAGATACGTTTTTGCGAGAACAAAAGCGGTGCTATCCTTAGGTTTCCAGACCAGGGTGTaGTTTTCTCCCATGACTCCT +
Preference number: 5 (lower is better)
Translates to: PQIRRYVFARTKAVLSLGFQTRV*FSPMTP
Trigger: AGGAGTCATGGGAGAAAACAACACCCTGGTCTGGAA...ACCTAAGGATAGCACCGCTTTTGTTCTCGCAAAAACGTATCTCCTAATTTGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp GCTAGAAATTTTGCAGATTCATTCTTACAACAGAGGTACAGCAAACAACCAGACATCCGTAGGTGCAGTTaGGATGGCACAGGTGGCACA +
Preference number: 5 (lower is better)
Translates to: ARNFADSFLQQRYSKQPDIRRCS*DGTGGT
Trigger: TGTGCCACCTGTGCCATCCAAACTGCACCTACGGAT...GTCTGGTTGTTTGCTGTACCTCTGTTGTAAGAATGAATCTGCAAAATTTCTAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CAA 90 bp TGCAGTGGAAGCCTTGAAGCAGAACCACTGGAATCAAGCATCCTCTGGAAGACTGCTTCTCTTAATTCCTaGATAGCGACGGGAATTTTA +
Preference number: 5 (lower is better)
Translates to: CSGSLEAEPLESSILWKTASLNS*IATGIL
Trigger: TAAAATTCCCGTCGCTATCAAGGAATTAAGAGAAGC...AGTCTTCCAGAGGATGCTTGATTCCAGTGGTTCTGCTTCAAGGCTTCCACTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp TTTGATGTGTCATCCTCTCTTGCTGATTTCATGACAGCAAGACAGGGGCAGCATTCATCGAGGATTTCCTaGTTGGCTTTCGGAGATGTT +
Preference number: 5 (lower is better)
Translates to: FDVSSSLADFMTARQGQHSSRIS*LAFGDV
Trigger: AACATCTCCGAAAGCCAACAAGGAAATCCTCGATGA...ATGCTGCCCCTGTCTTGCTGTCATGAAATCAGCAAGAGAGGATGACACATCAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp GCAAACAACCAGACACAACAAAGAGCTTGTGCAGGCTCGGTCATGTGTTTATCTTCATCGAGGATTTCCTaGTTGGCTTTCGGAGATGTT +
Preference number: 5 (lower is better)
Translates to: ANNQTQQRACAGSVMCLSSSRIS*LAFGDV
Trigger: AACATCTCCGAAAGCCAACAAGGAAATCCTCGATGA...AGATAAACACATGACCGAGCCTGCACAAGCTCTTTGTTGTGTCTGGTTGTTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CAA 90 bp AAGATAGAGCCAGCAGAGAGAACAGGGATCAAATCTGTCACAAACACACACATAAGTAGTTCATGCCCTTaGCGATCTGCACACACCAGT +
Preference number: 5 (lower is better)
Translates to: KIEPAERTGIKSVTNTHISSSCP*RSAHTS
Trigger: ACTGGTGTGTGCAGATCGCAAAGGGCATGAACTACT...TATGTGTGTGTTTGTGACAGATTTGATCCCTGTTCTCTCTGCTGGCTCTATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CAA 90 bp GTCAAGATAGAGCCAGCAGAGAGAACAGGGATCAAATCTGTCACAAACACACACCCAAAATCTGTGATCTaGACATGCTGCGGTGTTTTC +
Preference number: 5 (lower is better)
Translates to: VKIEPAERTGIKSVTNTHPKSVI*TCCGVF
Trigger: GAAAACACCGCAGCATGTCAAGATCACAGATTTTGG...GTGTGTGTTTGTGACAGATTTGATCCCTGTTCTCTCTGCTGGCTCTATCTTGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CAA 90 bp CCTCAAATTAGGAGATACGTTTTTGCGAGAACAAAAGCGGTGCTATCCTTAGGTTCAACTCACGGAACTTaGGGCGACTATCTGCGTCTA +
Preference number: 5 (lower is better)
Translates to: PQIRRYVFARTKAVLSLGSTHGT*GDYLRL
Trigger: TAGACGCAGATAGTCGCCCAAAGTTCCGTGAGTTGA...ACCTAAGGATAGCACCGCTTTTGTTCTCGCAAAAACGTATCTCCTAATTTGAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp GTAAATGCTTCACAGTTTGAAGACAAAGGAATGCAACTTCCCAAAATGTGCCCGTCAACTCACGGAACTTaGGGCGACTATCTGCGTCTA +
Preference number: 5 (lower is better)
Translates to: VNASQFEDKGMQLPKMCPSTHGT*GDYLRL
Trigger: TAGACGCAGATAGTCGCCCAAAGTTCCGTGAGTTGA...CGGGCACATTTTGGGAAGTTGCATTCCTTTGTCTTCAAACTGTGAAGCATTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp AAGATAGAGCCAGCAGAGAGAACAGGGATCAAATCTGTCACAAACACACACATATCAACTCACGGAACTTaGGGCGACTATCTGCGTCTA +
Preference number: 5 (lower is better)
Translates to: KIEPAERTGIKSVTNTHISTHGT*GDYLRL
Trigger: TAGACGCAGATAGTCGCCCAAAGTTCCGTGAGTTGA...TATGTGTGTGTTTGTGACAGATTTGATCCCTGTTCTCTCTGCTGGCTCTATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CAA 90 bp CAAACAACCAGACACAACAAAGAGCTTGTGCAGGCTCGGTCATGTGTTTATCTGCTTGATGGGACAGCTTaGCAGCCCATTTCTATCAAT +
Preference number: 5 (lower is better)
Translates to: QTTRHNKELVQARSCVYLLDGTA*QPISIN
Trigger: ATTGATAGAAATGGGCTGCAAAGCTGTCCCATCAAG...CAGATAAACACATGACCGAGCCTGCACAAGCTCTTTGTTGTGTCTGGTTGTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CAA 90 bp AAGATAGAGCCAGCAGAGAGAACAGGGATCAAATCTGTCACAAACACACACATAAAGAAGCTGTCTTCCTaGATGGGACAGCTTTGCAGC +
Preference number: 5 (lower is better)
Translates to: KIEPAERTGIKSVTNTHIKKLSS*MGQLCS
Trigger: GCTGCAAAGCTGTCCCATCAAGGAAGACAGCTTCTT...TATGTGTGTGTTTGTGACAGATTTGATCCCTGTTCTCTCTGCTGGCTCTATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CAA 90 bp CTACCTGAATTCCACACTACTCATAATGCTACTGTCATTCGCACCTGTAAAATGTGTACCTGCCATGACTaGATACAGTACCGATCCGGC +
Preference number: 5 (lower is better)
Translates to: LPEFHTTHNATVIRTCKMCTCHD*IQYRSG
Trigger: GCCGGATCGGTACTGTATCAAGTCATGGCAGGTACA...CATTTTACAGGTGCGAATGACAGTAGCATTATGAGTAGTGTGGAATTCAGGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp TTCTGCTCAAAGGGACAATATTCTTGCTGGATGCGTTTCTGTAAATGCTTCACATGTACCTGCCATGACTaGATACAGTACCGATCCGGC +
Preference number: 5 (lower is better)
Translates to: FCSKGQYSCWMRFCKCFTCTCHD*IQYRSG
Trigger: GCCGGATCGGTACTGTATCAAGTCATGGCAGGTACA...TGTGAAGCATTTACAGAAACGCATCCAGCAAGAATATTGTCCCTTTGAGCAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp CCAAAATGTGCCCGAGGTGGAAGTACTTCCTGGCTAGTCGGTGTAAACGTTGCAAATCCGAGTTATTATTaGATGTGTCATCCTCTCTTG +
Preference number: 5 (lower is better)
Translates to: PKCARGGSTSWLVGVNVANPSYY*MCHPLL
Trigger: CAAGAGAGGATGACACATCAAATAATAACTCGGATT...TGCAACGTTTACACCGACTAGCCAGGAAGTACTTCCACCTCGGGCACATTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp CCCTTTCCATTAACACTGCCCCAACAGAACCTGCCTCAGACCAAGCTAAATGTGTTCTTCCTTGATAAATaGGATGGGGTGGATATTGAC +
Preference number: 5 (lower is better)
Translates to: PFPLTLPQQNLPQTKLNVFFLDK*DGVDID
Trigger: GTCAATATCCACCCCATCCAATTTATCAAGGAAGAA...CACATTTAGCTTGGTCTGAGGCAGGTTCTGTTGGGGCAGTGTTAATGGAAAGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CAA 90 bp TTCTGCTCAAAGGGACAATATTCTTGCTGGATGCGTTTCTGTAAATGCTTCACAGAAAATCATGGGACTTaGGGCAGCTCCTCTCCTGAC +
Preference number: 5 (lower is better)
Translates to: FCSKGQYSCWMRFCKCFTENHGT*GSSSPD
Trigger: GTCAGGAGAGGAGCTGCCCAAAGTCCCATGATTTTC...TGTGAAGCATTTACAGAAACGCATCCAGCAAGAATATTGTCCCTTTGAGCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CAA 90 bp TGCAACTTCCCAAAATGTGCCCGAGGTGGAAGTACTTCCTGGCTAGTCGGTGTATCTAAAACGAAGTTATaGCTGTCTGTTGTTAATCGG +
Preference number: 5 (lower is better)
Translates to: CNFPKCARGGSTSWLVGVSKTKL*LSVVNR
Trigger: CCGATTAACAACAGACAGCAATAACTTCGTTTTAGA...TACACCGACTAGCCAGGAAGTACTTCCACCTCGGGCACATTTTGGGAAGTTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CAA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAAACCCGTAGGTGCAGTTaGGATGGCACAGGTGGCACA +
Preference number: 5 (lower is better)
Translates to: EIVERKCSFSGRLKSDSETRRCS*DGTGGT
Trigger: TGTGCCACCTGTGCCATCCAAACTGCACCTACGGGT...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR CAA 90 bp TTATTATTTGATGTGTCATCCTCTCTTGCTGATTTCATGACAGCAAGACAGGGGTCCCATTGGGACAGCTaGGATCACACTTTTGGCCCT +
Preference number: 5 (lower is better)
Translates to: LLFDVSSSLADFMTARQGSHWDS*DHTFGP
Trigger: AGGGCCAAAAGTGTGATCCAAGCTGTCCCAATGGGA...CCCCTGTCTTGCTGTCATGAAATCAGCAAGAGAGGATGACACATCAAATAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000454757.6
CDS-3UTR CAA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAACCCAACTGCGTGAGCTaGTTACTCGTGCCTTGGCAA +
Preference number: 5 (lower is better)
Translates to: EIVERKCSFSGRLKSDSEPNCVS*LLVPWQ
Trigger: TTGCCAAGGCACGAGTAACAAGCTCACGCAGTTGGG...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR CAA 90 bp CCTCAAATTAGGAGATACGTTTTTGCGAGAACAAAAGCGGTGCTATCCTTAGGTAAGTCCATCGACATGTaGCTGAGAAAGTCACTGCTG +
Preference number: 5 (lower is better)
Translates to: PQIRRYVFARTKAVLSLGKSIDM*LRKSLL
Trigger: CAGCAGTGACTTTCTCAGCAACATGTCGATGGACTT...ACCTAAGGATAGCACCGCTTTTGTTCTCGCAAAAACGTATCTCCTAATTTGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CAA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAAGCTTGGATCACACTTTaGGCAGCTGCCCAGGTGGTT +
Preference number: 5 (lower is better)
Translates to: EIVERKCSFSGRLKSDSEAWITL*AAAQVV
Trigger: AACCACCTGGGCAGCTGCCAAAAGTGTGATCCAAGC...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR CAA 90 bp GTAAATGCTTCACAGTTTGAAGACAAAGGAATGCAACTTCCCAAAATGTGCCCGTGGGCACAGATGATTTaGGTCAGTTTCTGGCAGTTC +
Preference number: 5 (lower is better)
Translates to: VNASQFEDKGMQLPKMCPWAQMI*VSFWQF
Trigger: GAACTGCCAGAAACTGACCAAAATCATCTGTGCCCA...CGGGCACATTTTGGGAAGTTGCATTCCTTTGTCTTCAAACTGTGAAGCATTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAAGCACCAAAGCTGTATTaGCCCTCGGGGTTCACATCC +
Preference number: 5 (lower is better)
Translates to: EIVERKCSFSGRLKSDSEAPKLY*PSGFTS
Trigger: GGATGTGAACCCCGAGGGCAAATACAGCTTTGGTGC...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR CAA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAAATTCCGTTACACACTTaGCGGCAAGGCCCTTCGCAC +
Preference number: 5 (lower is better)
Translates to: EIVERKCSFSGRLKSDSEIPLHT*RQGPSH
Trigger: GTGCGAAGGGCCTTGCCGCAAAGTGTGTAACGGAAT...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR CAA 90 bp TTCTGCTCAAAGGGACAATATTCTTGCTGGATGCGTTTCTGTAAATGCTTCACACCATCACTTATCTCCTaGAGGGAGCGTAATCCCAAG +
Preference number: 5 (lower is better)
Translates to: FCSKGQYSCWMRFCKCFTPSLIS*RERNPK
Trigger: CTTGGGATTACGCTCCCTCAAGGAGATAAGTGATGG...TGTGAAGCATTTACAGAAACGCATCCAGCAAGAATATTGTCCCTTTGAGCAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAATCCAGAAGGTTGCACTaGTCCACGCATTCCCTGCCT +
Preference number: 5 (lower is better)
Translates to: EIVERKCSFSGRLKSDSESRRLH*STHSLP
Trigger: AGGCAGGGAATGCGTGGACAAGTGCAACCTTCTGGA...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR CAA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAATCACCCTCCAGAAGGTaGCACTTGTCCACGCATTCC +
Preference number: 5 (lower is better)
Translates to: EIVERKCSFSGRLKSDSESPSRR*HLSTHS
Trigger: GGAATGCGTGGACAAGTGCAACCTTCTGGAGGGTGA...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR CAA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAATCTCCACAAACTCCCTaGGCTCACCCTCCAGAAGGT +
Preference number: 5 (lower is better)
Translates to: EIVERKCSFSGRLKSDSESPQTP*AHPPEG
Trigger: ACCTTCTGGAGGGTGAGCCAAGGGAGTTTGTGGAGA...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR CAA 90 bp AAACACACTGCCTGCTACATAGTTTTTATCCCAGGTATAATTTGTGAGGAATGTATCCGTAGGTGCAGTTaGGATGGCACAGGTGGCACA +
Preference number: 5 (lower is better)
Translates to: KHTACYIVFIPGIICEECIRRCS*DGTGGT
Trigger: TGTGCCACCTGTGCCATCCAAACTGCACCTACGGAT...ACATTCCTCACAAATTATACCTGGGATAAAAACTATGTAGCAGGCAGTGTGTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CAA 90 bp CAAGATAGAGCCAGCAGAGAGAACAGGGATCAAATCTGTCACAAACACACACATCCGGAGCCCAGCACTTaGATCTTTTTGAATTCAGTT +
Preference number: 5 (lower is better)
Translates to: QDRASRENRDQICHKHTHPEPST*IFLNSV
Trigger: AACTGAATTCAAAAAGATCAAAGTGCTGGGCTCCGG...ATGTGTGTGTTTGTGACAGATTTGATCCCTGTTCTCTCTGCTGGCTCTATCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CAA 90 bp AGTCACAACATCAAGAACTTTCAGCAAACACCTAAGCTTTGGTGTCATCAGCTGTACTGGGAGCCAATATaGTCTTTGTGTTCCCGGACA +
Preference number: 5 (lower is better)
Translates to: SHNIKNFQQTPKLWCHQLYWEPI*SLCSRT
Trigger: TGTCCGGGAACACAAAGACAATATTGGCTCCCAGTA...CAGCTGATGACACCAAAGCTTAGGTGTTTGCTGAAAGTTCTTGATGTTGTGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CAA 90 bp CAAGATAGAGCCAGCAGAGAGAACAGGGATCAAATCTGTCACAAACACACACATATTCCGTCATATGGCTaGGATCCAAAGGTCATCAAC +
Preference number: 5 (lower is better)
Translates to: QDRASRENRDQICHKHTHIPSYG*DPKVIN
Trigger: GTTGATGACCTTTGGATCCAAGCCATATGACGGAAT...ATGTGTGTGTTTGTGACAGATTTGATCCCTGTTCTCTCTGCTGGCTCTATCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CAA 90 bp AGAGAGAACAGGGATCAAATCTGTCACAAACACACACATACACACACACACATAGGGTCTCGGGCCATTTaGGAGAATTCGATGATCAAC +
Preference number: 5 (lower is better)
Translates to: RENRDQICHKHTHTHTHIGSRAI*ENSMIN
Trigger: GTTGATCATCGAATTCTCCAAAATGGCCCGAGACCC...TATGTGTGTGTGTGTATGTGTGTGTTTGTGACAGATTTGATCCCTGTTCTCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CAA 90 bp CACACTGCCTGCTACATAGTTTTTATCCCAGGTATAATTTGTGAGGAATGTATAGCCACGGTGGAATTGTaGCTGGTTGCACTCAGAGAG +
Preference number: 5 (lower is better)
Translates to: HTACYIVFIPGIICEECIATVEL*LVALRE
Trigger: CTCTCTGAGTGCAACCAGCAACAATTCCACCGTGGC...TATACATTCCTCACAAATTATACCTGGGATAAAAACTATGTAGCAGGCAGTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CAA 90 bp CTACCTGAATTCCACACTACTCATAATGCTACTGTCATTCGCACCTGTAAAATGAAGAAGCTGTCTTCCTaGATGGGACAGCTTTGCAGC +
Preference number: 5 (lower is better)
Translates to: LPEFHTTHNATVIRTCKMKKLSS*MGQLCS
Trigger: GCTGCAAAGCTGTCCCATCAAGGAAGACAGCTTCTT...CATTTTACAGGTGCGAATGACAGTAGCATTATGAGTAGTGTGGAATTCAGGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp TTCTGCTCAAAGGGACAATATTCTTGCTGGATGCGTTTCTGTAAATGCTTCACATGGAAGACTTGTGGCTaGTGCTCCTTGCTCACAGTT +
Preference number: 5 (lower is better)
Translates to: FCSKGQYSCWMRFCKCFTWKTCG*CSLLTV
Trigger: AACTGTGAGCAAGGAGCACAAGCCACAAGTCTTCCA...TGTGAAGCATTTACAGAAACGCATCCAGCAAGAATATTGTCCCTTTGAGCAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp TTATTATTTGATGTGTCATCCTCTCTTGCTGATTTCATGACAGCAAGACAGGGGGAGATTTGGGTTGAATaGGTCTGCAGAGACTCCAGG +
Preference number: 5 (lower is better)
Translates to: LLFDVSSSLADFMTARQGEIWVE*VCRDSR
Trigger: CCTGGAGTCTCTGCAGACCAATTCAACCCAAATCTC...CCCCTGTCTTGCTGTCATGAAATCAGCAAGAGAGGATGACACATCAAATAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CAA 90 bp ATTGGAATGACCTCAGGAGCTTTAAAAACTACGAATGCTTGGGTTTCAGCCCCAAGCTCCCCAATGAGGTaGTGCCTTTTTATAAGAGAG +
Preference number: 5 (lower is better)
Translates to: IGMTSGALKTTNAWVSAPSSPMR*CLFIRE
Trigger: CTCTCTTATAAAAAGGCACAACCTCATTGGGGAGCT...TGGGGCTGAAACCCAAGCATTCGTAGTTTTTAAAGCTCCTGAGGTCATTCCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CAA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAATCCCATTGGGACAGCTaGGATCACACTTTTGGCAGC +
Preference number: 5 (lower is better)
Translates to: EIVERKCSFSGRLKSDSESHWDS*DHTFGS
Trigger: GCTGCCAAAAGTGTGATCCAAGCTGTCCCAATGGGA...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR CAA 90 bp GCTAGAAATTTTGCAGATTCATTCTTACAACAGAGGTACAGCAAACAACCAGACAGAAAACTGACCATGTaGCTTGGTCCTGCCGCGTAT +
Preference number: 5 (lower is better)
Translates to: ARNFADSFLQQRYSKQPDRKLTM*LGPAAY
Trigger: ATACGCGGCAGGACCAAGCAACATGGTCAGTTTTCT...GTCTGGTTGTTTGCTGTACCTCTGTTGTAAGAATGAATCTGCAAAATTTCTAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CAA 90 bp AGAGAGAACAGGGATCAAATCTGTCACAAACACACACATACACACACACACATATCGAGGATTTCCTTGTaGGCTTTCGGAGATGTTGCT +
Preference number: 5 (lower is better)
Translates to: RENRDQICHKHTHTHTHISRISL*AFGDVA
Trigger: AGCAACATCTCCGAAAGCCAACAAGGAAATCCTCGA...TATGTGTGTGTGTGTATGTGTGTGTTTGTGACAGATTTGATCCCTGTTCTCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CAA 90 bp CCTCAAATTAGGAGATACGTTTTTGCGAGAACAAAAGCGGTGCTATCCTTAGGTTCATCGAGGATTTCCTaGTTGGCTTTCGGAGATGTT +
Preference number: 5 (lower is better)
Translates to: PQIRRYVFARTKAVLSLGSSRIS*LAFGDV
Trigger: AACATCTCCGAAAGCCAACAAGGAAATCCTCGATGA...ACCTAAGGATAGCACCGCTTTTGTTCTCGCAAAAACGTATCTCCTAATTTGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp AGTCACAACATCAAGAACTTTCAGCAAACACCTAAGCTTTGGTGTCATCAGCTGATTCCGTCATATGGCTaGGATCCAAAGGTCATCAAC +
Preference number: 5 (lower is better)
Translates to: SHNIKNFQQTPKLWCHQLIPSYG*DPKVIN
Trigger: GTTGATGACCTTTGGATCCAAGCCATATGACGGAAT...CAGCTGATGACACCAAAGCTTAGGTGTTTGCTGAAAGTTCTTGATGTTGTGACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CAA 90 bp TTCTGCTCAAAGGGACAATATTCTTGCTGGATGCGTTTCTGTAAATGCTTCACAAAGATGCCATTTGGCTaGGCTTCCTTGGGAAAGAAG +
Preference number: 5 (lower is better)
Translates to: FCSKGQYSCWMRFCKCFTKMPFG*ASLGKK
Trigger: CTTCTTTCCCAAGGAAGCCAAGCCAAATGGCATCTT...TGTGAAGCATTTACAGAAACGCATCCAGCAAGAATATTGTCCCTTTGAGCAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp TTCTGCTCAAAGGGACAATATTCTTGCTGGATGCGTTTCTGTAAATGCTTCACACAGCAAGCTTCTTCCTaGTTGGAAGAGCCCATTGAA +
Preference number: 5 (lower is better)
Translates to: FCSKGQYSCWMRFCKCFTQQASS*LEEPIE
Trigger: TTCAATGGGCTCTTCCAACAAGGAAGAAGCTTGCTG...TGTGAAGCATTTACAGAAACGCATCCAGCAAGAATATTGTCCCTTTGAGCAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp CCTCAAATTAGGAGATACGTTTTTGCGAGAACAAAAGCGGTGCTATCCTTAGGTTTAGGAGATACGTTTTaGCGAGAACAAAAGCGGTGC +
Preference number: 5 (lower is better)
Translates to: PQIRRYVFARTKAVLSLGLGDTF*REQKRC
Trigger: GCACCGCTTTTGTTCTCGCAAAAACGTATCTCCTAA...ACCTAAGGATAGCACCGCTTTTGTTCTCGCAAAAACGTATCTCCTAATTTGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp CACACTGCCTGCTACATAGTTTTTATCCCAGGTATAATTTGTGAGGAATGTATAAAGAGGCTAAGGGCTTaGCGGCTTCTACCAGACAGA +
Preference number: 5 (lower is better)
Translates to: HTACYIVFIPGIICEECIKRLRA*RLLPDR
Trigger: TCTGTCTGGTAGAAGCCGCAAAGCCCTTAGCCTCTT...TATACATTCCTCACAAATTATACCTGGGATAAAAACTATGTAGCAGGCAGTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CAA 90 bp CTTAGAGGGAGCAGGTTGTTTAGGGTGACTGACCTCAGCCTTATGTGGACTTTAAGTTATTGCTGTCTGTaGTTAATCGGTTACATTGTC +
Preference number: 5 (lower is better)
Translates to: LRGSRLFRVTDLSLMWTLSYCCL*LIGYIV
Trigger: GACAATGTAACCGATTAACAACAGACAGCAATAACT...TAAAGTCCACATAAGGCTGAGGTCAGTCACCCTAAACAACCTGCTCCCTCTAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CAA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAAACCACCTCACAGTTATaGAACATCCTCTGGAGGCTG +
Preference number: 5 (lower is better)
Translates to: EIVERKCSFSGRLKSDSETTSQL*NILWRL
Trigger: CAGCCTCCAGAGGATGTTCAATAACTGTGAGGTGGT...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR CAA 90 bp CACACTGCCTGCTACATAGTTTTTATCCCAGGTATAATTTGTGAGGAATGTATAAGAAAACTGACCATGTaGCTTGGTCCTGCCGCGTAT +
Preference number: 5 (lower is better)
Translates to: HTACYIVFIPGIICEECIRKLTM*LGPAAY
Trigger: ATACGCGGCAGGACCAAGCAACATGGTCAGTTTTCT...TATACATTCCTCACAAATTATACCTGGGATAAAAACTATGTAGCAGGCAGTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CAA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAAAGAAAACTGACCATGTaGCTTGGTCCTGCCGCGTAT +
Preference number: 5 (lower is better)
Translates to: EIVERKCSFSGRLKSDSERKLTM*LGPAAY
Trigger: ATACGCGGCAGGACCAAGCAACATGGTCAGTTTTCT...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR CAA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAACCATCACTTATCTCCTaGAGGGAGCGTAATCCCAAG +
Preference number: 5 (lower is better)
Translates to: EIVERKCSFSGRLKSDSEPSLIS*RERNPK
Trigger: CTTGGGATTACGCTCCCTCAAGGAGATAAGTGATGG...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR CAA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAATTCCAGACCAGGGTGTaGTTTTCTCCCATGACTCCT +
Preference number: 5 (lower is better)
Translates to: EIVERKCSFSGRLKSDSEFQTRV*FSPMTP
Trigger: AGGAGTCATGGGAGAAAACAACACCCTGGTCTGGAA...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR CAA 90 bp TTCTGCTCAAAGGGACAATATTCTTGCTGGATGCGTTTCTGTAAATGCTTCACACCGGAGCCCAGCACTTaGATCTTTTTGAATTCAGTT +
Preference number: 5 (lower is better)
Translates to: FCSKGQYSCWMRFCKCFTPEPST*IFLNSV
Trigger: AACTGAATTCAAAAAGATCAAAGTGCTGGGCTCCGG...TGTGAAGCATTTACAGAAACGCATCCAGCAAGAATATTGTCCCTTTGAGCAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp TTATTATTTGATGTGTCATCCTCTCTTGCTGATTTCATGACAGCAAGACAGGGGCCAAAATCTGTGATCTaGACATGCTGCGGTGTTTTC +
Preference number: 5 (lower is better)
Translates to: LLFDVSSSLADFMTARQGPKSVI*TCCGVF
Trigger: GAAAACACCGCAGCATGTCAAGATCACAGATTTTGG...CCCCTGTCTTGCTGTCATGAAATCAGCAAGAGAGGATGACACATCAAATAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp TTCTGCTCAAAGGGACAATATTCTTGCTGGATGCGTTTCTGTAAATGCTTCACACCAAAATCTGTGATCTaGACATGCTGCGGTGTTTTC +
Preference number: 5 (lower is better)
Translates to: FCSKGQYSCWMRFCKCFTPKSVI*TCCGVF
Trigger: GAAAACACCGCAGCATGTCAAGATCACAGATTTTGG...TGTGAAGCATTTACAGAAACGCATCCAGCAAGAATATTGTCCCTTTGAGCAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp CACACTGCCTGCTACATAGTTTTTATCCCAGGTATAATTTGTGAGGAATGTATATGGAATTGTTGCTGGTaGCACTCAGAGAGCTCAGGA +
Preference number: 5 (lower is better)
Translates to: HTACYIVFIPGIICEECIWNCCW*HSESSG
Trigger: TCCTGAGCTCTCTGAGTGCAACCAGCAACAATTCCA...TATACATTCCTCACAAATTATACCTGGGATAAAAACTATGTAGCAGGCAGTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CAA 90 bp CTACCTGAATTCCACACTACTCATAATGCTACTGTCATTCGCACCTGTAAAATGCAAGCTTCTTCCTTGTaGGAAGAGCCCATTGAAGTA +
Preference number: 5 (lower is better)
Translates to: LPEFHTTHNATVIRTCKMQASSL*EEPIEV
Trigger: TACTTCAATGGGCTCTTCCAACAAGGAAGAAGCTTG...CATTTTACAGGTGCGAATGACAGTAGCATTATGAGTAGTGTGGAATTCAGGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp CACACTGCCTGCTACATAGTTTTTATCCCAGGTATAATTTGTGAGGAATGTATATGGAAGACTTGTGGCTaGTGCTCCTTGCTCACAGTT +
Preference number: 5 (lower is better)
Translates to: HTACYIVFIPGIICEECIWKTCG*CSLLTV
Trigger: AACTGTGAGCAAGGAGCACAAGCCACAAGTCTTCCA...TATACATTCCTCACAAATTATACCTGGGATAAAAACTATGTAGCAGGCAGTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CAA 90 bp TTTGATGTGTCATCCTCTCTTGCTGATTTCATGACAGCAAGACAGGGGCAGCATAATCCGAGTTATTATTaGATGTGTCATCCTCTCTTG +
Preference number: 5 (lower is better)
Translates to: FDVSSSLADFMTARQGQHNPSYY*MCHPLL
Trigger: CAAGAGAGGATGACACATCAAATAATAACTCGGATT...ATGCTGCCCCTGTCTTGCTGTCATGAAATCAGCAAGAGAGGATGACACATCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS-3UTR CAA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAAAAGTCCATCGACATGTaGCTGAGAAAGTCACTGCTG +
Preference number: 5 (lower is better)
Translates to: EIVERKCSFSGRLKSDSEKSIDM*LRKSLL
Trigger: CAGCAGTGACTTTCTCAGCAACATGTCGATGGACTT...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR CAA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAATGGGCACAGATGATTTaGGTCAGTTTCTGGCAGTTC +
Preference number: 5 (lower is better)
Translates to: EIVERKCSFSGRLKSDSEWAQMI*VSFWQF
Trigger: GAACTGCCAGAAACTGACCAAAATCATCTGTGCCCA...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR CAA 90 bp CACACTGCCTGCTACATAGTTTTTATCCCAGGTATAATTTGTGAGGAATGTATACACTTGATAGGCACTTaGCCTCCTTCTGCATGGTAT +
Preference number: 5 (lower is better)
Translates to: HTACYIVFIPGIICEECIHLIGT*PPSAWY
Trigger: ATACCATGCAGAAGGAGGCAAAGTGCCTATCAAGTG...TATACATTCCTCACAAATTATACCTGGGATAAAAACTATGTAGCAGGCAGTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CAA 90 bp CACACTGCCTGCTACATAGTTTTTATCCCAGGTATAATTTGTGAGGAATGTATACAGCAAGCTTCTTCCTaGTTGGAAGAGCCCATTGAA +
Preference number: 5 (lower is better)
Translates to: HTACYIVFIPGIICEECIQQASS*LEEPIE
Trigger: TTCAATGGGCTCTTCCAACAAGGAAGAAGCTTGCTG...TATACATTCCTCACAAATTATACCTGGGATAAAAACTATGTAGCAGGCAGTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS-3UTR CAA 90 bp CAAGATAGAGCCAGCAGAGAGAACAGGGATCAAATCTGTCACAAACACACACATGTGTATGTCCGTGATTaGCTTCATAAGCTAGAAATT +
Preference number: 5 (lower is better)
Translates to: QDRASRENRDQICHKHTHVYVRD*LHKLEI
Trigger: AATTTCTAGCTTATGAAGCAAATCACGGACATACAC...ATGTGTGTGTTTGTGACAGATTTGATCCCTGTTCTCTCTGCTGGCTCTATCTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CAA 90 bp GAAATTGTAGAAAGGAAATGCAGTTTTAGTGGGAGACTAAAGTCAGACAGTGAACTTGTTACTCGTGCCTaGGCAAACTTTCTTTTCCTC +
Preference number: 5 (lower is better)
Translates to: EIVERKCSFSGRLKSDSELVTRA*ANFLFL
Trigger: GAGGAAAAGAAAGTTTGCCAAGGCACGAGTAACAAG...TTCACTGTCTGACTTTAGTCTCCCACTAAAACTGCATTTCCTTTCTACAATTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342916.7
CDS-3UTR CAA 90 bp AGAGAGAACAGGGATCAAATCTGTCACAAACACACACATACACACACACACATAGCTTCTCTTAATTCCTaGATAGCGACGGGAATTTTA +
Preference number: 5 (lower is better)
Translates to: RENRDQICHKHTHTHTHIASLNS*IATGIL
Trigger: TAAAATTCCCGTCGCTATCAAGGAATTAAGAGAAGC...TATGTGTGTGTGTGTATGTGTGTGTTTGTGACAGATTTGATCCCTGTTCTCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS-3UTR CAA 90 bp CACACTGCCTGCTACATAGTTTTTATCCCAGGTATAATTTGTGAGGAATGTATACTTGATGGGACAGCTTaGCAGCCCATTTCTATCAAT +
Preference number: 5 (lower is better)
Translates to: HTACYIVFIPGIICEECILDGTA*QPISIN
Trigger: ATTGATAGAAATGGGCTGCAAAGCTGTCCCATCAAG...TATACATTCCTCACAAATTATACCTGGGATAAAAACTATGTAGCAGGCAGTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000275493.7
CDS TCA 90 bp GGTGCAGTTTTTGAAGTGTTTAATATTCGTAGCATTTATGGAGAGTaGGTCTTTAAATTCACCAATACCTATTCCGTTACACACTTTGCG +
Preference number: 5 (lower is better)
Translates to: GAVFEVFNIRSIYGE*VFKFTNTYSVTHFA
Trigger: CGCAAAGTGTGTAACGGAATAGGTATTGGTGAATTTAAAGACTCACTCTCCATAAATGCTACGAATATTAAACACTTCAAAAACTGCACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000275493.7
ENST00000342916.7
ENST00000344576.7
ENST00000420316.6
ENST00000454757.6
ENST00000455089.5
CDS TCA 90 bp CCAAGGGAACAGGAAATATGTCGAAAAGTTCTCTCTCTAAAACACTaGTTTCCCATTTATATTCATGTGATAATTCAGCTCAAACCTGTG +
Preference number: 5 (lower is better)
Translates to: PREQEICRKVLSLKH*FPIYIHVIIQLKPV
Trigger: CACAGGTTTGAGCTGAATTATCACATGAATATAAATGGGAAATCAGTGTTTTAGAGAGAGAACTTTTCGACATATTTCCTGTTCCCTTGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420316.6
CDS CAA 72 bp GACGGAGTCAGGGGGCCGTGCGCGGTGGTTGTGGCGTaGGCGGCGAGGCGGGGACTCGGGCGGACGCCGACG +
Preference number: 6 (lower is better)
Translates to: DGVRGPCAVVVA*AARRGLGRTPT
Trigger: CGTCGGCGTCCGCCCGAGTCCCCGCCTCGCCGCCAACGCCACAACCACCGCGCACGGCCCCCTGACTCCGTC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000275493.7
ENST00000342916.7
ENST00000344576.7
ENST00000420316.6
ENST00000454757.6
ENST00000455089.5
ENST00000459688.1
ENST00000463948.1
CDS GCA 72 bp GAGCGCTGCCCCGGCCGTCCCGGAGGGTCGCATCGCTaGTCCCCGAAGAGCTCGCTCCGGCTCTCCCGATCA +
Preference number: 6 (lower is better)
Translates to: ERCPGRPGGSHR*SPKSSLRLSRS
Trigger: TGATCGGGAGAGCCGGAGCGAGCTCTTCGGGGAGCAGCGATGCGACCCTCCGGGACGGCCGGGGCAGCGCTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000275493.7
ENST00000342916.7
ENST00000344576.7
ENST00000420316.6
ENST00000454757.6
ENST00000455089.5
ENST00000459688.1
ENST00000463948.1
CDS CAA 90 bp TCAATACTGGACGGAGTCAGGGGGCCGTGCGCGGTGGTTGTGGCGTaGGCGGCGAGGCGGGGACTCGGGCGGACGCCGACGAGGTGGCCT +
Preference number: 6 (lower is better)
Translates to: SILDGVRGPCAVVVA*AARRGLGRTPTRWP
Trigger: AGGCCACCTCGTCGGCGTCCGCCCGAGTCCCCGCCTCGCCGCCAACGCCACAACCACCGCGCACGGCCCCCTGACTCCGTCCAGTATTGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000275493.7
ENST00000342916.7
ENST00000344576.7
ENST00000420316.6
ENST00000454757.6
ENST00000455089.5
ENST00000459688.1
ENST00000463948.1
CDS CAA 72 bp CAATACTGGACGGAGTCAGGGGGCCGTGCGCGGTGGTaGTGGCGTTGGCGGCGAGGCGGGGACTCGGGCGGA +
Preference number: 6 (lower is better)
Translates to: QYWTESGGRARW*WRWRRGGDSGG
Trigger: TCCGCCCGAGTCCCCGCCTCGCCGCCAACGCCACAACCACCGCGCACGGCCCCCTGACTCCGTCCAGTATTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000275493.7
ENST00000342916.7
ENST00000344576.7
ENST00000420316.6
ENST00000454757.6
ENST00000455089.5
ENST00000459688.1
ENST00000463948.1
CDS CAA 90 bp TCTCCCGATCAATACTGGACGGAGTCAGGGGGCCGTGCGCGGTGGTaGTGGCGTTGGCGGCGAGGCGGGGACTCGGGCGGACGCCGACGA +
Preference number: 6 (lower is better)
Translates to: SPDQYWTESGGRARW*WRWRRGGDSGGRRR
Trigger: TCGTCGGCGTCCGCCCGAGTCCCCGCCTCGCCGCCAACGCCACAACCACCGCGCACGGCCCCCTGACTCCGTCCAGTATTGATCGGGAGA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000275493.7
ENST00000342916.7
ENST00000344576.7
ENST00000420316.6
ENST00000454757.6
ENST00000455089.5
ENST00000459688.1
ENST00000463948.1
CDS CCA 72 bp GATCAATACTGGACGGAGTCAGGGGGCCGTGCGCGGTaGTTGTGGCGTTGGCGGCGAGGCGGGGACTCGGGC +
Preference number: 6 (lower is better)
Translates to: DQYWTESGGRAR*LWRWRRGGDSG
Trigger: GCCCGAGTCCCCGCCTCGCCGCCAACGCCACAACCACCGCGCACGGCCCCCTGACTCCGTCCAGTATTGATC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000275493.7
ENST00000342916.7
ENST00000344576.7
ENST00000420316.6
ENST00000454757.6
ENST00000455089.5
ENST00000459688.1
ENST00000463948.1
CDS GCA 72 bp CTCTCCCGATCAATACTGGACGGAGTCAGGGGGCCGTaGGCGGTGGTTGTGGCGTTGGCGGCGAGGCGGGGA +
Preference number: 6 (lower is better)
Translates to: LSRSILDGVRGP*AVVVALAARRG
Trigger: TCCCCGCCTCGCCGCCAACGCCACAACCACCGCGCACGGCCCCCTGACTCCGTCCAGTATTGATCGGGAGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000275493.7
ENST00000342916.7
ENST00000344576.7
ENST00000420316.6
ENST00000454757.6
ENST00000455089.5
ENST00000459688.1
ENST00000463948.1
CDS CCA 72 bp CCCCGAAGAGCTCGCTCCGGCTCTCCCGATCAATACTaGACGGAGTCAGGGGGCCGTGCGCGGTGGTTGTGG +
Preference number: 6 (lower is better)
Translates to: PRRARSGSPDQY*TESGGRARWLW
Trigger: CCACAACCACCGCGCACGGCCCCCTGACTCCGTCCAGTATTGATCGGGAGAGCCGGAGCGAGCTCTTCGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000275493.7
ENST00000342916.7
ENST00000344576.7
ENST00000420316.6
ENST00000454757.6
ENST00000455089.5
ENST00000459688.1
ENST00000463948.1
CDS CCA 72 bp TGCAGCAGCCTCCGCAGCGTGCGCTTCCGAACGATGTaGCGCCTTCGCATGAAGAGGCCGATCCCCAGGGCC +
Preference number: 6 (lower is better)
Translates to: CSSLRSVRFRTM*RLRMKRPIPRA
Trigger: GGCCCTGGGGATCGGCCTCTTCATGCGAAGGCGCCACATCGTTCGGAAGCGCACGCTGCGGAGGCTGCTGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275493.7
ENST00000454757.6
ENST00000455089.5
CDS TCA 72 bp GCTGGTTGCACTCAGAGAGCTCAGGAGGGGAGTCCGTaGCGTGGAGGGGCTGCTGAAGAAGCCCTGCTGTGG +
Preference number: 6 (lower is better)
Translates to: AGCTQRAQEGSP*RGGAAEEALLW
Trigger: CCACAGCAGGGCTTCTTCAGCAGCCCCTCCACGTCACGGACTCCCCTCCTGAGCTCTCTGAGTGCAACCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000275493.7
ENST00000454757.6
ENST00000455089.5
CDS CCA 72 bp GTTGCCCACTGCAGTGCTGTGGGGGTCCTGGTAGTGTaGGTCTCTGCTGGGCGCGGGGTTCAGAGGCTGATT +
Preference number: 6 (lower is better)
Translates to: VAHCSAVGVLVV*VSAGRGVQRLI
Trigger: AATCAGCCTCTGAACCCCGCGCCCAGCAGAGACCCACACTACCAGGACCCCCACAGCACTGCAGTGGGCAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS CAA 90 bp CTGCCACTGTTTCCCCCTCTGGAGATGCTGGAGGGAGCACCTGGCTaGGACACTGGAGACTGGCTGCTGCTGAGTGGGTCGAGGAGGTTG +
Preference number: 6 (lower is better)
Translates to: LPLFPPLEMLEGAPG*DTGDWLLLSGSRRL
Trigger: CAACCTCCTCGACCCACTCAGCAGCAGCCAGTCTCCAGTGTCCAAGCCAGGTGCTCCCTCCAGCATCTCCAGAGGGGGAAACAGTGGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS TCA 72 bp GAAGGTTGCACTTGTCCACGCATTCCCTGCCTCGGCTaGCATTCCGGCAAGAGACGCAGTCCCTGGGCTCCG +
Preference number: 6 (lower is better)
Translates to: EGCTCPRIPCLG*HSGKRRSPWAP
Trigger: CGGAGCCCAGGGACTGCGTCTCTTGCCGGAATGTCAGCCGAGGCAGGGAATGCGTGGACAAGTGCAACCTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000275493.7
ENST00000342916.7
ENST00000344576.7
ENST00000454757.6
ENST00000455089.5
CDS GCA 72 bp GCCACTCACCAGGCACTGGGAGGAAGGTGTCGTCTATaGTGTCCTCAGTCAAGGCGCCTGTGGGGTCTGAGC +
Preference number: 6 (lower is better)
Translates to: ATHQALGGRCRL*CPQSRRLWGLS
Trigger: GCTCAGACCCCACAGGCGCCTTGACTGAGGACAGCATAGACGACACCTTCCTCCCAGTGCCTGGTGAGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS CAA 72 bp CGCCACTGGATGCTCTCCACGTTGCACAGGGCAGGGTaGTTGCTGAACCGCACGGCGCCATGCAGGATTTCC +
Preference number: 6 (lower is better)
Translates to: RHWMLSTLHRAG*LLNRTAPCRIS
Trigger: GGAAATCCTGCATGGCGCCGTGCGGTTCAGCAACAACCCTGCCCTGTGCAACGTGGAGAGCATCCAGTGGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000275493.7
ENST00000342916.7
ENST00000344576.7
ENST00000420316.6
ENST00000450046.1
CDS CAA 72 bp CTGCTGACTATGTCCCGCCACTGGATGCTCTCCACGTaGCACAGGGCAGGGTTGTTGCTGAACCGCACGGCG +
Preference number: 6 (lower is better)
Translates to: LLTMSRHWMLST*HRAGLLLNRTA
Trigger: CGCCGTGCGGTTCAGCAACAACCCTGCCCTGTGCAACGTGGAGAGCATCCAGTGGCGGGACATAGTCAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000275493.7
ENST00000342916.7
ENST00000344576.7
ENST00000420316.6
ENST00000450046.1
CDS CAA 72 bp TTTCCCCCTCTGGAGATGCTGGAGGGAGCACCTGGCTaGGACACTGGAGACTGGCTGCTGCTGAGTGGGTCG +
Preference number: 6 (lower is better)
Translates to: FPPLEMLEGAPG*DTGDWLLLSGS
Trigger: CGACCCACTCAGCAGCAGCCAGTCTCCAGTGTCCAAGCCAGGTGCTCCCTCCAGCATCTCCAGAGGGGGAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS CAA 90 bp AGGTGGCACACATGGCCGGCGTCTGCGTACTTCCAGACCAGGGTGTaGTTTTCTCCCATGACTCCTGCCGGGCAGGTCTTGACGCAGTGG +
Preference number: 6 (lower is better)
Translates to: RWHTWPASAYFQTRV*FSPMTPAGQVLTQW
Trigger: CCACTGCGTCAAGACCTGCCCGGCAGGAGTCATGGGAGAAAACAACACCCTGGTCTGGAAGTACGCAGACGCCGGCCATGTGTGCCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000275493.7
ENST00000342916.7
ENST00000344576.7
ENST00000454757.6
ENST00000455089.5
CDS CAA 90 bp GCAGGGCTGTCGAATGTGCTGTTGACACAGGTGGGCTGGACAGTGTaGAGATACTCGGGGTTGCCCACTGCAGTGCTGTGGGGGTCCTGG +
Preference number: 6 (lower is better)
Translates to: AGLSNVLLTQVGWTV*RYSGLPTAVLWGSW
Trigger: CCAGGACCCCCACAGCACTGCAGTGGGCAACCCCGAGTATCTCAACACTGTCCAGCCCACCTGTGTCAACAGCACATTCGACAGCCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS CAA 90 bp TGGCTGCCTTTCTGGGCCCAGTGGGCAGGGCTGTCGAATGTGCTGTaGACACAGGTGGGCTGGACAGTGTTGAGATACTCGGGGTTGCCC +
Preference number: 6 (lower is better)
Translates to: WLPFWAQWAGLSNVL*TQVGWTVLRYSGLP
Trigger: GGGCAACCCCGAGTATCTCAACACTGTCCAGCCCACCTGTGTCAACAGCACATTCGACAGCCCTGCCCACTGGGCCCAGAAAGGCAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS GCA 72 bp TCACTGGGGGACTTGCCACGGCAGCGCCCGGAGCACTaGTGGGCACAGATGATTTTGGTCAGTTTCTGGCAG +
Preference number: 6 (lower is better)
Translates to: SLGDLPRQRPEH*WAQMILVSFWQ
Trigger: CTGCCAGAAACTGACCAAAATCATCTGTGCCCAGCAGTGCTCCGGGCGCTGCCGTGGCAAGTCCCCCAGTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000275493.7
ENST00000342916.7
ENST00000344576.7
ENST00000420316.6
ENST00000454757.6
ENST00000455089.5
CDS GCA 72 bp GACATGCTGCGGTGTTTTCACCAGTACGTTCCTGGCTaGCAGGTCGCGGTGCACCAAGCGACGGTCCTCCAA +
Preference number: 6 (lower is better)
Translates to: DMLRCFHQYVPG*QVAVHQATVLQ
Trigger: TTGGAGGACCGTCGCTTGGTGCACCGCGACCTGGCAGCCAGGAACGTACTGGTGAAAACACCGCAGCATGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275493.7
ENST00000454757.6
ENST00000455089.5
CDS GCA 72 bp CTGCAGTGCTGTGGGGGTCCTGGTAGTGTGGGTCTCTaGTGGGCGCGGGGTTCAGAGGCTGATTGTGATAGA +
Preference number: 6 (lower is better)
Translates to: LQCCGGPGSVGL*WARGSEADCDR
Trigger: TCTATCACAATCAGCCTCTGAACCCCGCGCCCAGCAGAGACCCACACTACCAGGACCCCCACAGCACTGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS GCA 72 bp GGGCTGGACAGTGTTGAGATACTCGGGGTTGCCCACTaGAGTGCTGTGGGGGTCCTGGTAGTGTGGGTCTCT +
Preference number: 6 (lower is better)
Translates to: GLDSVEILGVAH*SAVGVLVVWVS
Trigger: AGAGACCCACACTACCAGGACCCCCACAGCACTGCAGTGGGCAACCCCGAGTATCTCAACACTGTCCAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS GCA 72 bp GGGAGATGGAGTTGGGTGGGCCCCACTCACGGATGCTaGTTAGTTCACGATGTGGCCTGCGCCTTACTGAGG +
Preference number: 6 (lower is better)
Translates to: GRWSWVGPTHGC*LVHDVACALLR
Trigger: CCTCAGTAAGGCGCAGGCCACATCGTGAACTAAGCAGCATCCGTGAGTGGGGCCCACCCAACTCCATCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485503.1
CDS GCA 72 bp AGGGGGAGATGGAGTTGGGTGGGCCCCACTCACGGATaGTGCTTAGTTCACGATGTGGCCTGCGCCTTACTG +
Preference number: 6 (lower is better)
Translates to: RGRWSWVGPTHG*CLVHDVACALL
Trigger: CAGTAAGGCGCAGGCCACATCGTGAACTAAGCAGCATCCGTGAGTGGGGCCCACCCAACTCCATCTCCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485503.1
CDS CCA 72 bp CTGGGGGACTTGCCACGGCAGCGCCCGGAGCACTGCTaGGCACAGATGATTTTGGTCAGTTTCTGGCAGTTC +
Preference number: 6 (lower is better)
Translates to: LGDLPRQRPEHC*AQMILVSFWQF
Trigger: GAACTGCCAGAAACTGACCAAAATCATCTGTGCCCAGCAGTGCTCCGGGCGCTGCCGTGGCAAGTCCCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000275493.7
ENST00000342916.7
ENST00000344576.7
ENST00000420316.6
ENST00000454757.6
ENST00000455089.5
CDS CCA 72 bp CAGTGCTGTGGGGGTCCTGGTAGTGTGGGTCTCTGCTaGGCGCGGGGTTCAGAGGCTGATTGTGATAGACAG +
Preference number: 6 (lower is better)
Translates to: QCCGGPGSVGLC*ARGSEADCDRQ
Trigger: CTGTCTATCACAATCAGCCTCTGAACCCCGCGCCCAGCAGAGACCCACACTACCAGGACCCCCACAGCACTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS CAA 90 bp AGAAAGTCACTGCTGACTATGTCCCGCCACTGGATGCTCTCCACGTaGCACAGGGCAGGGTTGTTGCTGAACCGCACGGCGCCATGCAGG +
Preference number: 6 (lower is better)
Translates to: RKSLLTMSRHWMLST*HRAGLLLNRTAPCR
Trigger: CCTGCATGGCGCCGTGCGGTTCAGCAACAACCCTGCCCTGTGCAACGTGGAGAGCATCCAGTGGCGGGACATAGTCAGCAGTGACTTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000275493.7
ENST00000342916.7
ENST00000344576.7
ENST00000420316.6
ENST00000450046.1
CDS CAA 90 bp GGCTTGGACACTGGAGACTGGCTGCTGCTGAGTGGGTCGAGGAGGTaGAGGAGCAGGACTGTTTCCAGACAAGCCACTCACCAGGCACTG +
Preference number: 6 (lower is better)
Translates to: GLDTGDWLLLSGSRR*RSRTVSRQATHQAL
Trigger: CAGTGCCTGGTGAGTGGCTTGTCTGGAAACAGTCCTGCTCCTCAACCTCCTCGACCCACTCAGCAGCAGCCAGTCTCCAGTGTCCAAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS TCA 72 bp TGCCACGGCAGCGCCCGGAGCACTGCTGGGCACAGATaGTTTTGGTCAGTTTCTGGCAGTTCTCCTCTCCTG +
Preference number: 6 (lower is better)
Translates to: CHGSARSTAGHR*FWSVSGSSPLL
Trigger: CAGGAGAGGAGAACTGCCAGAAACTGACCAAAATCATCTGTGCCCAGCAGTGCTCCGGGCGCTGCCGTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000275493.7
ENST00000342916.7
ENST00000344576.7
ENST00000420316.6
ENST00000454757.6
ENST00000455089.5
CDS GCA 72 bp CTTCCAGACCAGGGTGTTGTTTTCTCCCATGACTCCTaGCGGGCAGGTCTTGACGCAGTGGGGGCCGTCAAT +
Preference number: 6 (lower is better)
Translates to: LPDQGVVFSHDS*RAGLDAVGAVN
Trigger: ATTGACGGCCCCCACTGCGTCAAGACCTGCCCGGCAGGAGTCATGGGAGAAAACAACACCCTGGTCTGGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000275493.7
ENST00000342916.7
ENST00000344576.7
ENST00000454757.6
ENST00000455089.5
CDS CCA 72 bp CTCTCCTGCACCCCAGCAGCTCCCATTGGGACAGCTTaGATCACACTTTTGGCAGCTGCCCAGGTGGTTCTG +
Preference number: 6 (lower is better)
Translates to: LSCTPAAPIGTA*ITLLAAAQVVL
Trigger: CAGAACCACCTGGGCAGCTGCCAAAAGTGTGATCCAAGCTGTCCCAATGGGAGCTGCTGGGGTGCAGGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000275493.7
ENST00000342916.7
ENST00000344576.7
ENST00000420316.6
CDS CAA 72 bp CACTGGATGCTCTCCACGTTGCACAGGGCAGGGTTGTaGCTGAACCGCACGGCGCCATGCAGGATTTCCTGT +
Preference number: 6 (lower is better)
Translates to: HWMLSTLHRAGL*LNRTAPCRISC
Trigger: ACAGGAAATCCTGCATGGCGCCGTGCGGTTCAGCAACAACCCTGCCCTGTGCAACGTGGAGAGCATCCAGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000275493.7
ENST00000342916.7
ENST00000344576.7
ENST00000420316.6
ENST00000450046.1
CDS CAA 72 bp ACATGGCCGGCGTCTGCGTACTTCCAGACCAGGGTGTaGTTTTCTCCCATGACTCCTGCCGGGCAGGTCTTG +
Preference number: 6 (lower is better)
Translates to: TWPASAYFQTRV*FSPMTPAGQVL
Trigger: CAAGACCTGCCCGGCAGGAGTCATGGGAGAAAACAACACCCTGGTCTGGAAGTACGCAGACGCCGGCCATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000275493.7
ENST00000342916.7
ENST00000344576.7
ENST00000454757.6
ENST00000455089.5
CDS GCA 72 bp CCCACTCACGGATGCTGCTTAGTTCACGATGTGGCCTaGGCCTTACTGAGGCTTGCTCTAATGCGCTGGAGG +
Preference number: 6 (lower is better)
Translates to: PTHGCCLVHDVA*ALLRLALMRWR
Trigger: CCTCCAGCGCATTAGAGCAAGCCTCAGTAAGGCGCAGGCCACATCGTGAACTAAGCAGCATCCGTGAGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485503.1
CDS CCA 72 bp GCAGGGCTGTCGAATGTGCTGTTGACACAGGTGGGCTaGACAGTGTTGAGATACTCGGGGTTGCCCACTGCA +
Preference number: 6 (lower is better)
Translates to: AGLSNVLLTQVG*TVLRYSGLPTA
Trigger: TGCAGTGGGCAACCCCGAGTATCTCAACACTGTCCAGCCCACCTGTGTCAACAGCACATTCGACAGCCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS CAA 72 bp ACAAACTCCCTTGGCTCACCCTCCAGAAGGTTGCACTaGTCCACGCATTCCCTGCCTCGGCTGACATTCCGG +
Preference number: 6 (lower is better)
Translates to: TNSLGSPSRRLH*STHSLPRLTFR
Trigger: CCGGAATGTCAGCCGAGGCAGGGAATGCGTGGACAAGTGCAACCTTCTGGAGGGTGAGCCAAGGGAGTTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000275493.7
ENST00000342916.7
ENST00000344576.7
ENST00000454757.6
ENST00000455089.5
CDS CAA 90 bp ATGTCCCGCCACTGGATGCTCTCCACGTTGCACAGGGCAGGGTTGTaGCTGAACCGCACGGCGCCATGCAGGATTTCCTGTAAATTTCTC +
Preference number: 6 (lower is better)
Translates to: MSRHWMLSTLHRAGL*LNRTAPCRISCKFL
Trigger: GAGAAATTTACAGGAAATCCTGCATGGCGCCGTGCGGTTCAGCAACAACCCTGCCCTGTGCAACGTGGAGAGCATCCAGTGGCGGGACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000275493.7
ENST00000342916.7
ENST00000344576.7
ENST00000420316.6
ENST00000450046.1
CDS GCA 72 bp ACACTTTGCGGCAAGGCCCTTCGCACTTCTTACACTTaGGGACGCCGTCTTCCTCCATCTCATAGCTGTCGG +
Preference number: 6 (lower is better)
Translates to: TLCGKALRTSYT*GRRLPPSHSCR
Trigger: CCGACAGCTATGAGATGGAGGAAGACGGCGTCCGCAAGTGTAAGAAGTGCGAAGGGCCTTGCCGCAAAGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000275493.7
ENST00000342916.7
ENST00000344576.7
ENST00000420316.6
ENST00000454757.6
ENST00000455089.5
CDS CAA 90 bp ACTATGTCCCGCCACTGGATGCTCTCCACGTTGCACAGGGCAGGGTaGTTGCTGAACCGCACGGCGCCATGCAGGATTTCCTGTAAATTT +
Preference number: 6 (lower is better)
Translates to: TMSRHWMLSTLHRAG*LLNRTAPCRISCKF
Trigger: AAATTTACAGGAAATCCTGCATGGCGCCGTGCGGTTCAGCAACAACCCTGCCCTGTGCAACGTGGAGAGCATCCAGTGGCGGGACATAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000275493.7
ENST00000342916.7
ENST00000344576.7
ENST00000420316.6
ENST00000450046.1
CDS GCA 72 bp GACACTTCTTCACGCAGGTGGCACCAAAGCTGTATTTaGCCTCGGGGTTCACATCCATCTGGTACGTGGTGG +
Preference number: 6 (lower is better)
Translates to: DTSSRRWHQSCI*PRGSHPSGTWW
Trigger: CCACCACGTACCAGATGGATGTGAACCCCGAGGGCAAATACAGCTTTGGTGCCACCTGCGTGAAGAAGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000275493.7
ENST00000342916.7
ENST00000344576.7
ENST00000420316.6
ENST00000454757.6
ENST00000455089.5
CDS GCA 72 bp TCAGTCAAGGCGCCTGTGGGGTCTGAGCTGTATCGCTaGAAGAAGCTGTCTTCCTTGATGGGACAGCTTTGC +
Preference number: 6 (lower is better)
Translates to: SVKAPVGSELYR*KKLSSLMGQLC
Trigger: GCAAAGCTGTCCCATCAAGGAAGACAGCTTCTTGCAGCGATACAGCTCAGACCCCACAGGCGCCTTGACTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275493.7
ENST00000454757.6
ENST00000455089.5
CDS GCA 72 bp TTATGTATTCAGGCACTGGGAGGAAGGTGTCGTCTATaGTGTCCTCAGTCAAGGCGCCTGTGGGGTCTGAGC +
Preference number: 6 (lower is better)
Translates to: LCIQALGGRCRL*CPQSRRLWGLS
Trigger: GCTCAGACCCCACAGGCGCCTTGACTGAGGACAGCATAGACGACACCTTCCTCCCAGTGCCTGAATACATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS GCA 72 bp ATCTGCTCCTTACGCCCTTCACTGTGTCTGCAAATCTaGCACTGTTTCCCCCTCTGGAGATGCTGGAGGGAG +
Preference number: 6 (lower is better)
Translates to: ICSLRPSLCLQI*HCFPLWRCWRE
Trigger: CTCCCTCCAGCATCTCCAGAGGGGGAAACAGTGGCAGATTTGCAGACACAGTGAAGGGCGTAAGGAGCAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS GCA 72 bp GGTTGGAATGCTAGGCCAAGTGCAACTGGTCAGGAATaGCATCCTGCATGCTGGCTGTTGCTCTTCTGGGCA +
Preference number: 6 (lower is better)
Translates to: GWNARPSATGQE*HPACWLLLFWA
Trigger: TGCCCAGAAGAGCAACAGCCAGCATGCAGGATGGCATTCCTGACCAGTTGCACTTGGCCTAGCATTCCAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459688.1
CDS CCA 72 bp TTGCTGAGAAAGTCACTGCTGACTATGTCCCGCCACTaGATGCTCTCCACGTTGCACAGGGCAGGGTTGTTG +
Preference number: 6 (lower is better)
Translates to: LLRKSLLTMSRH*MLSTLHRAGLL
Trigger: CAACAACCCTGCCCTGTGCAACGTGGAGAGCATCCAGTGGCGGGACATAGTCAGCAGTGACTTTCTCAGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000275493.7
ENST00000342916.7
ENST00000344576.7
ENST00000420316.6
ENST00000450046.1
CDS CCA 72 bp AGGTGTCGTCTATGCTGTCCTCAGTCAAGGCGCCTGTaGGGTCTGAGCTGTATCGCTGCAAGAAGCTGTCTT +
Preference number: 6 (lower is better)
Translates to: RCRLCCPQSRRL*GLSCIAARSCL
Trigger: AAGACAGCTTCTTGCAGCGATACAGCTCAGACCCCACAGGCGCCTTGACTGAGGACAGCATAGACGACACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275493.7
ENST00000454757.6
ENST00000455089.5
CDS CCA 72 bp GCAGGACTGTTTCCAGACAAGCCACTCACCAGGCACTaGGAGGAAGGTGTCGTCTATGCTGTCCTCAGTCAA +
Preference number: 6 (lower is better)
Translates to: AGLFPDKPLTRH*EEGVVYAVLSQ
Trigger: TTGACTGAGGACAGCATAGACGACACCTTCCTCCCAGTGCCTGGTGAGTGGCTTGTCTGGAAACAGTCCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS CAA 72 bp CAGCTGCCCAGGTGGTTCTGGAAGTCCATCGACATGTaGCTGAGAAAGTCACTGCTGACTATGTCCCGCCAC +
Preference number: 6 (lower is better)
Translates to: QLPRWFWKSIDM*LRKSLLTMSRH
Trigger: GTGGCGGGACATAGTCAGCAGTGACTTTCTCAGCAACATGTCGATGGACTTCCAGAACCACCTGGGCAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275493.7
ENST00000342916.7
ENST00000344576.7
ENST00000420316.6
CDS CAA 72 bp GGACACTTCTTCACGCAGGTGGCACCAAAGCTGTATTaGCCCTCGGGGTTCACATCCATCTGGTACGTGGTG +
Preference number: 6 (lower is better)
Translates to: GHFFTQVAPKLY*PSGFTSIWYVV
Trigger: CACCACGTACCAGATGGATGTGAACCCCGAGGGCAAATACAGCTTTGGTGCCACCTGCGTGAAGAAGTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000275493.7
ENST00000342916.7
ENST00000344576.7
ENST00000420316.6
ENST00000454757.6
ENST00000455089.5
CDS CAA 72 bp ATAGACCATGCTTCTCTCTTAGACCCAGCTGAGGCTTaGGCTAGCCGGACAGTGAGGACGAGCACCAGAGGA +
Preference number: 6 (lower is better)
Translates to: IDHASLLDPAEA*ASRTVRTSTRG
Trigger: TCCTCTGGTGCTCGTCCTCACTGTCCGGCTAGCCAAAGCCTCAGCTGGGTCTAAGAGAGAAGCATGGTCTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485503.1
CDS CAA 90 bp CACTTTTGGCAGCTGCCCAGGTGGTTCTGGAAGTCCATCGACATGTaGCTGAGAAAGTCACTGCTGACTATGTCCCGCCACTGGATGCTC +
Preference number: 6 (lower is better)
Translates to: HFWQLPRWFWKSIDM*LRKSLLTMSRHWML
Trigger: GAGCATCCAGTGGCGGGACATAGTCAGCAGTGACTTTCTCAGCAACATGTCGATGGACTTCCAGAACCACCTGGGCAGCTGCCAAAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275493.7
ENST00000342916.7
ENST00000344576.7
ENST00000420316.6
CDS CAA 90 bp CAAAGCCCAATAGACCATGCTTCTCTCTTAGACCCAGCTGAGGCTTaGGCTAGCCGGACAGTGAGGACGAGCACCAGAGGAGAGTTCAGA +
Preference number: 6 (lower is better)
Translates to: QSPIDHASLLDPAEA*ASRTVRTSTRGEFR
Trigger: TCTGAACTCTCCTCTGGTGCTCGTCCTCACTGTCCGGCTAGCCAAAGCCTCAGCTGGGTCTAAGAGAGAAGCATGGTCTATTGGGCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485503.1
CDS TCA 72 bp GTCTATGCTGTCCTCAGTCAAGGCGCCTGTGGGGTCTaGGCTGTATCGCTGCAAGAAGCTGTCTTCCTTGAT +
Preference number: 6 (lower is better)
Translates to: VYAVLSQGACGV*AVSLQEAVFLD
Trigger: ATCAAGGAAGACAGCTTCTTGCAGCGATACAGCTCAGACCCCACAGGCGCCTTGACTGAGGACAGCATAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275493.7
ENST00000454757.6
ENST00000455089.5
CDS GCA 72 bp GATGATTTTGGTCAGTTTCTGGCAGTTCTCCTCTCCTaGACCCCAGCAGCTCCCATTGGGACAGCTTGGATC +
Preference number: 6 (lower is better)
Translates to: DDFGQFLAVLLS*TPAAPIGTAWI
Trigger: GATCCAAGCTGTCCCAATGGGAGCTGCTGGGGTGCAGGAGAGGAGAACTGCCAGAAACTGACCAAAATCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000275493.7
ENST00000342916.7
ENST00000344576.7
ENST00000420316.6
ENST00000454757.6
ENST00000455089.5
CDS GCA 72 bp AGGCCAAGTGCAACTGGTCAGGAATGCCATCCTGCATaGTGGCTGTTGCTCTTCTGGGCACTTAGAAAGTCC +
Preference number: 6 (lower is better)
Translates to: RPSATGQECHPA*WLLLFWALRKS
Trigger: GGACTTTCTAAGTGCCCAGAAGAGCAACAGCCAGCATGCAGGATGGCATTCCTGACCAGTTGCACTTGGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459688.1
CDS CCA 72 bp GTGAAGGAGTCACCCCTAAATGCCACCGGCAGGATGTaGAGATCGCCACTGATGGAGGTGCAGTTTTTGAAG +
Preference number: 6 (lower is better)
Translates to: VKESPLNATGRM*RSPLMEVQFLK
Trigger: CTTCAAAAACTGCACCTCCATCAGTGGCGATCTCCACATCCTGCCGGTGGCATTTAGGGGTGACTCCTTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000275493.7
ENST00000342916.7
ENST00000344576.7
ENST00000420316.6
ENST00000454757.6
ENST00000455089.5
CDS CCA 72 bp CCAAGTGCAACTGGTCAGGAATGCCATCCTGCATGCTaGCTGTTGCTCTTCTGGGCACTTAGAAAGTCCAGG +
Preference number: 6 (lower is better)
Translates to: PSATGQECHPAC*LLLFWALRKSR
Trigger: CCTGGACTTTCTAAGTGCCCAGAAGAGCAACAGCCAGCATGCAGGATGGCATTCCTGACCAGTTGCACTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459688.1
CDS TCA 72 bp TCCCAATGGAAGCACAGACTGCAATTTGTACCTGAATaGCAAGGTAGCGCTGGGGGTCTCGGGCCATTTTGG +
Preference number: 6 (lower is better)
Translates to: SQWKHRLQFVPE*QGSAGGLGPFW
Trigger: CCAAAATGGCCCGAGACCCCCAGCGCTACCTTGTCATTCAGGTACAAATTGCAGTCTGTGCTTCCATTGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485503.1
CDS TCA 72 bp GAAGTGGAGAGTCAGGGGTGTGAAGCCACGTCTGCCTaGCACCAAAGCCCAATAGACCATGCTTCTCTCTTA +
Preference number: 6 (lower is better)
Translates to: EVESQGCEATSA*HQSPIDHASLL
Trigger: TAAGAGAGAAGCATGGTCTATTGGGCTTTGGTGTCAGGCAGACGTGGCTTCACACCCCTGACTCTCCACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000485503.1
CDS CAA 72 bp AGCCCATTTCTATCAATGCAAGCCACGGTGGAATTGTaGCTGGTTGCACTCAGAGAGCTCAGGAGGGGAGTC +
Preference number: 6 (lower is better)
Translates to: SPFLSMQATVEL*LVALRELRRGV
Trigger: GACTCCCCTCCTGAGCTCTCTGAGTGCAACCAGCAACAATTCCACCGTGGCTTGCATTGATAGAAATGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000275493.7
ENST00000454757.6
ENST00000455089.5
CDS CAA 72 bp AGAGGGACTCTTCCCAATGGAAGCACAGACTGCAATTaGTACCTGAATGACAAGGTAGCGCTGGGGGTCTCG +
Preference number: 6 (lower is better)
Translates to: RGTLPNGSTDCN*YLNDKVALGVS
Trigger: CGAGACCCCCAGCGCTACCTTGTCATTCAGGTACAAATTGCAGTCTGTGCTTCCATTGGGAAGAGTCCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485503.1
CDS TCA 72 bp GAGAAAACTGACCATGTTGCTTGGTCCTGCCGCGTATaGTTTCTAGGTTCTCAAAGGCATGGAGGTCCGTCC +
Preference number: 6 (lower is better)
Translates to: EKTDHVAWSCRV*FLGSQRHGGPS
Trigger: GGACGGACCTCCATGCCTTTGAGAACCTAGAAATCATACGCGGCAGGACCAAGCAACATGGTCAGTTTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000275493.7
ENST00000342916.7
ENST00000344576.7
ENST00000454757.6
ENST00000455089.5
CDS GCA 72 bp CCAGGCTGGCATGTGACAGAACACAGTGACATGAGATaGTCATTAGAGGGACTCTTCCCAATGGAAGCACAG +
Preference number: 6 (lower is better)
Translates to: PGWHVTEHSDMR*SLEGLFPMEAQ
Trigger: CTGTGCTTCCATTGGGAAGAGTCCCTCTAATGAGCATCTCATGTCACTGTGTTCTGTCACATGCCAGCCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485503.1
CDS CCA 72 bp CTTGGATCACACTTTTGGCAGCTGCCCAGGTGGTTCTaGAAGTCCATCGACATGTTGCTGAGAAAGTCACTG +
Preference number: 6 (lower is better)
Translates to: LGSHFWQLPRWF*KSIDMLLRKSL
Trigger: CAGTGACTTTCTCAGCAACATGTCGATGGACTTCCAGAACCACCTGGGCAGCTGCCAAAAGTGTGATCCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275493.7
ENST00000342916.7
ENST00000344576.7
ENST00000420316.6
CDS CCA 72 bp TCACCACATAATTACGGGGACACTTCTTCACGCAGGTaGCACCAAAGCTGTATTTGCCCTCGGGGTTCACAT +
Preference number: 6 (lower is better)
Translates to: SPHNYGDTSSRR*HQSCICPRGSH
Trigger: ATGTGAACCCCGAGGGCAAATACAGCTTTGGTGCCACCTGCGTGAAGAAGTGTCCCCGTAATTATGTGGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000275493.7
ENST00000342916.7
ENST00000344576.7
ENST00000420316.6
ENST00000454757.6
ENST00000455089.5
CDS GCA 72 bp ATGTGTTTATCTGCTCCTTACGCCCTTCACTGTGTCTaGAAATCTGCCACTGTTTCCCCCTCTGGAGATGCT +
Preference number: 6 (lower is better)
Translates to: MCLSAPYALHCV*KSATVSPSGDA
Trigger: AGCATCTCCAGAGGGGGAAACAGTGGCAGATTTGCAGACACAGTGAAGGGCGTAAGGAGCAGATAAACACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS GCA 72 bp ACAAAGAGCTTGTGCAGGCTCGGTCATGTGTTTATCTaGTCCTTACGCCCTTCACTGTGTCTGCAAATCTGC +
Preference number: 6 (lower is better)
Translates to: TKSLCRLGHVFI*SLRPSLCLQIC
Trigger: GCAGATTTGCAGACACAGTGAAGGGCGTAAGGAGCAGATAAACACATGACCGAGCCTGCACAAGCTCTTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455089.5
CDS GCA 72 bp CTCATTAGAGGGACTCTTCCCAATGGAAGCACAGACTaGAATTTGTACCTGAATGACAAGGTAGCGCTGGGG +
Preference number: 6 (lower is better)
Translates to: LIRGTLPNGSTD*NLYLNDKVALG
Trigger: CCCCAGCGCTACCTTGTCATTCAGGTACAAATTGCAGTCTGTGCTTCCATTGGGAAGAGTCCCTCTAATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485503.1
CDS GCA 72 bp CTTAGTTCACGATGTGGCCTGCGCCTTACTGAGGCTTaGTCTAATGCGCTGGAGGGTTTAATAATGCGATCT +
Preference number: 6 (lower is better)
Translates to: LSSRCGLRLTEA*SNALEGLIMRS
Trigger: AGATCGCATTATTAAACCCTCCAGCGCATTAGAGCAAGCCTCAGTAAGGCGCAGGCCACATCGTGAACTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485503.1
CDS CCA 72 bp ACCTGCTGTGGCTTGGTCCTGGGTATCGAAAGAGTCTaGATTTTTAGGGCTCATACTATCCTCCGTGGTCAT +
Preference number: 6 (lower is better)
Translates to: TCCGLVLGIERV*IFRAHTILRGH
Trigger: ATGACCACGGAGGATAGTATGAGCCCTAAAAATCCAGACTCTTTCGATACCCAGGACCAAGCCACAGCAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000275493.7
ENST00000454757.6
CDS CCA 72 bp CAGGAATGCCATCCTGCATGCTGGCTGTTGCTCTTCTaGGCACTTAGAAAGTCCAGGCAAAGGATCATTAAC +
Preference number: 6 (lower is better)
Translates to: QECHPACWLLLF*ALRKSRQRIIN
Trigger: GTTAATGATCCTTTGCCTGGACTTTCTAAGTGCCCAGAAGAGCAACAGCCAGCATGCAGGATGGCATTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000459688.1
CDS CAA 90 bp TGGGTGCATATAACTAAGGCGTCTTCACGTGGCTCTTGCTTTCACTaGGTAGGTTTTCAGGTTGAACAAGCTGAGGCAGGTGAGGTTGGA +
Preference number: 6 (lower is better)
Translates to: WVHITKASSRGSCFH*VGFQVEQAEAGEVG
Trigger: TCCAACCTCACCTGCCTCAGCTTGTTCAACCTGAAAACCTACCAAGTGAAAGCAAGAGCCACGTGAAGACGCCTTAGTTATATGCACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459688.1
CDS CCA 72 bp GCACGGCGCCATGCAGGATTTCCTGTAAATTTCTCATaGGCAGCTCCTTCAGTCCGGTTTTATTTGCATCAT +
Preference number: 6 (lower is better)
Translates to: ARRHAGFPVNFS*AAPSVRFYLHH
Trigger: ATGATGCAAATAAAACCGGACTGAAGGAGCTGCCCATGAGAAATTTACAGGAAATCCTGCATGGCGCCGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000275493.7
ENST00000342916.7
ENST00000344576.7
ENST00000420316.6
ENST00000450046.1
CDS CCA 72 bp CATCAGGGCACGGTAGAAGTTGGAGTCTGTAGGACTTaGCAAATGCATTCTTTCATCCCCCTGAATGACAAG +
Preference number: 6 (lower is better)
Translates to: HQGTVEVGVCRT*QMHSFIPLNDK
Trigger: CTTGTCATTCAGGGGGATGAAAGAATGCATTTGCCAAGTCCTACAGACTCCAACTTCTACCGTGCCCTGATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000275493.7
ENST00000454757.6
ENST00000455089.5
CDS CAA 72 bp AATTCAGTTTCCTTCAAGATCCTCAAGAGAGCTTGGTaGGGAGCTTCTCCACTGGGTGTAAGAGGCTCCACA +
Preference number: 6 (lower is better)
Translates to: NSVSFKILKRAW*GASPLGVRGST
Trigger: TGTGGAGCCTCTTACACCCAGTGGAGAAGCTCCCAACCAAGCTCTCTTGAGGATCTTGAAGGAAACTGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000275493.7
ENST00000454757.6
ENST00000455089.5
CDS CAA 72 bp ATAACTAAGGCGTCTTCACGTGGCTCTTGCTTTCACTaGGTAGGTTTTCAGGTTGAACAAGCTGAGGCAGGT +
Preference number: 6 (lower is better)
Translates to: ITKASSRGSCFH*VGFQVEQAEAG
Trigger: ACCTGCCTCAGCTTGTTCAACCTGAAAACCTACCAAGTGAAAGCAAGAGCCACGTGAAGACGCCTTAGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459688.1
CDS CAA 90 bp GCCACCGGCAGGATGTGGAGATCGCCACTGATGGAGGTGCAGTTTTaGAAGTGTTTAATATTCGTAGCATTTATGGAGAGTGAGTCTTTA +
Preference number: 6 (lower is better)
Translates to: ATGRMWRSPLMEVQF*KCLIFVAFMESESL
Trigger: TAAAGACTCACTCTCCATAAATGCTACGAATATTAAACACTTCAAAAACTGCACCTCCATCAGTGGCGATCTCCACATCCTGCCGGTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000275493.7
ENST00000342916.7
ENST00000344576.7
ENST00000420316.6
ENST00000454757.6
ENST00000455089.5
CDS GCA 72 bp TTCGATGATCAACTCACGGAACTTTGGGCGACTATCTaGGTCTATCATCCAGCACTTGACCATGATCATGTA +
Preference number: 6 (lower is better)
Translates to: FDDQLTELWATI*VYHPALDHDHV
Trigger: TACATGATCATGGTCAAGTGCTGGATGATAGACGCAGATAGTCGCCCAAAGTTCCGTGAGTTGATCATCGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000275493.7
ENST00000454757.6
ENST00000455089.5
ENST00000485503.1
CDS GCA 72 bp TGGGTGCATATAACTAAGGCGTCTTCACGTGGCTCTTaGTTTCACTTGGTAGGTTTTCAGGTTGAACAAGCT +
Preference number: 6 (lower is better)
Translates to: WVHITKASSRGS*FHLVGFQVEQA
Trigger: AGCTTGTTCAACCTGAAAACCTACCAAGTGAAAGCAAGAGCCACGTGAAGACGCCTTAGTTATATGCACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000459688.1
CDS CCA 72 bp GATTTCCTTTACGGTTTTCAGAATATCCAGTTCCTGTaGATCCAGAGGAGGAGTATGTGTGAAGGAGTCACC +
Preference number: 6 (lower is better)
Translates to: DFLYGFQNIQFL*IQRRSMCEGVT
Trigger: GGTGACTCCTTCACACATACTCCTCCTCTGGATCCACAGGAACTGGATATTCTGAAAACCGTAAAGGAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000275493.7
ENST00000342916.7
ENST00000344576.7
ENST00000420316.6
ENST00000454757.6
ENST00000455089.5
CDS CCA 72 bp CATTTTGGAGAATTCGATGATCAACTCACGGAACTTTaGGCGACTATCTGCGTCTATCATCCAGCACTTGAC +
Preference number: 6 (lower is better)
Translates to: HFGEFDDQLTEL*ATICVYHPALD
Trigger: GTCAAGTGCTGGATGATAGACGCAGATAGTCGCCCAAAGTTCCGTGAGTTGATCATCGAATTCTCCAAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000275493.7
ENST00000454757.6
ENST00000455089.5
ENST00000485503.1
CDS CCA 72 bp AGCTTGGATCACACTTTTGGCCCTGTAAATTTCTCATaGGCAGCTCCTTCAGTCCGGTTTTATTTGCATCAT +
Preference number: 6 (lower is better)
Translates to: SLDHTFGPVNFS*AAPSVRFYLHH
Trigger: ATGATGCAAATAAAACCGGACTGAAGGAGCTGCCCATGAGAAATTTACAGGGCCAAAAGTGTGATCCAAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000454757.6
ENST00000455089.5
CDS CCA 72 bp ACTCGGAAGATTGTGTTGGTTTCAGGCTCTATGTCATaGCTTATTGTCTTAAACCAGGAGAGTCTGACATCC +
Preference number: 6 (lower is better)
Translates to: TRKIVLVSGSMS*LIVLNQESLTS
Trigger: GGATGTCAGACTCTCCTGGTTTAAGACAATAAGCCATGACATAGAGCCTGAAACCAACACAATCTTCCGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463948.1
CDS TCA 72 bp TTCCTGAAATTATCACATCTCCATCACTTATCTCCTTaGGGGAGCGTAATCCCAAGGATGTTATGTTCAGGC +
Preference number: 6 (lower is better)
Translates to: FLKLSHLHHLSP*GSVIPRMLCSG
Trigger: GCCTGAACATAACATCCTTGGGATTACGCTCCCTCAAGGAGATAAGTGATGGAGATGTGATAATTTCAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000275493.7
ENST00000342916.7
ENST00000344576.7
ENST00000454757.6
ENST00000455089.5
CDS CAA 72 bp CCCCTATATGTTTCTGGAACCACTCGGAAGATTGTGTaGGTTTCAGGCTCTATGTCATGGCTTATTGTCTTA +
Preference number: 6 (lower is better)
Translates to: PLYVSGTTRKIV*VSGSMSWLIVL
Trigger: TAAGACAATAAGCCATGACATAGAGCCTGAAACCAACACAATCTTCCGAGTGGTTCCAGAAACATATAGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463948.1
CDS CAA 72 bp TTTCCTGAAATTATCACATCTCCATCACTTATCTCCTaGAGGGAGCGTAATCCCAAGGATGTTATGTTCAGG +
Preference number: 6 (lower is better)
Translates to: FPEIITSPSLIS*RERNPKDVMFR
Trigger: CCTGAACATAACATCCTTGGGATTACGCTCCCTCAAGGAGATAAGTGATGGAGATGTGATAATTTCAGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000275493.7
ENST00000342916.7
ENST00000344576.7
ENST00000454757.6
ENST00000455089.5