RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EGFLAM (Homo sapiens)

Ensembl gene IDs: ENSG00000164318

Ensembl transcript IDs: ENST00000322350.10, ENST00000336740.10, ENST00000354891.7, ENST00000397202.6, ENST00000397210.7, ENST00000504709.1, ENST00000506135.5, ENST00000508131.5, ENST00000508868.5, ENST00000513131.1, ENST00000514476.1

Found 797 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GACAGGGCCACCTCAGAATCCGAAACCACAATGACATGTGGCTGCTaGGGAGCTGCAGGAGGCAGGCAGGAATCTTGGGACAAAGTGGTG +
Preference number: 1 (lower is better)
Translates to: DRATSESETTMTCGC*GAAGGRQESWDKVV
Trigger: CACCACTTTGTCCCAAGATTCCTGCCTGCCTCCTGCAGCTCCCCAGCAGCCACATGTCATTGTGGTTTCGGATTCTGAGGTGGCCCTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504709.1
3UTR GCA 90 bp CCGGCTGAGAGGCACGCTGTGCAACTGCTCCTGCAGGGATTTATCTaGGCCAACCTCAGAGTAAAAGACAGTGTACCCAAGGATGGGACT +
Preference number: 1 (lower is better)
Translates to: PAERHAVQLLLQGFI*ANLRVKDSVPKDGT
Trigger: AGTCCCATCCTTGGGTACACTGTCTTTTACTCTGAGGTTGGCGCAGATAAATCCCTGCAGGAGCAGTTGCACAGCGTGCCTCTCAGCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504709.1
3UTR CCA 90 bp TTTCCAAGACAGGGCCACCTCAGAATCCGAAACCACAATGACATGTaGCTGCTGGGGAGCTGCAGGAGGCAGGCAGGAATCTTGGGACAA +
Preference number: 1 (lower is better)
Translates to: FPRQGHLRIRNHNDM*LLGSCRRQAGILGQ
Trigger: TTGTCCCAAGATTCCTGCCTGCCTCCTGCAGCTCCCCAGCAGCCACATGTCATTGTGGTTTCGGATTCTGAGGTGGCCCTGTCTTGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504709.1
3UTR CCA 90 bp GCCAGCCTGGCTGTAAGCTGCTATGCTCACACGATATTCAGTGCCTaGTTTCAAATCTCCAATCACTTCCTCCGTGGTCGGGATGTCCCG +
Preference number: 1 (lower is better)
Translates to: ASLAVSCYAHTIFSA*FQISNHFLRGRDVP
Trigger: CGGGACATCCCGACCACGGAGGAAGTGATTGGAGATTTGAAACCAGGCACTGAATATCGTGTGAGCATAGCAGCTTACAGCCAGGCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504709.1
3UTR GCA 90 bp ATGCCTTGGCATTTTCCACTGGATGCTGAAAGCCGTACAGTTCAATaGGCCCAGCTTGATGTCAAGAGGAGGCCCTACCTTGCCTGTTCC +
Preference number: 1 (lower is better)
Translates to: MPWHFPLDAESRTVQ*AQLDVKRRPYLACS
Trigger: GGAACAGGCAAGGTAGGGCCTCCTCTTGACATCAAGCTGGGCGCATTGAACTGTACGGCTTTCAGCATCCAGTGGAAAATGCCAAGGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504709.1
3UTR CCA 90 bp CTTGGGGGCAGTGTTCATCTCACCTTTCCCTTAGTAAGTCCATCATaGGGATCTGCCAGTGAACCAGCTGTCTCTGGGGTCATGTGCTTG +
Preference number: 1 (lower is better)
Translates to: LGGSVHLTFPLVSPS*GSASEPAVSGVMCL
Trigger: CAAGCACATGACCCCAGAGACAGCTGGTTCACTGGCAGATCCCCATGATGGACTTACTAAGGGAAAGGTGAGATGAACACTGCCCCCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322350.10
3UTR CCA 90 bp GTGTACCCAAGGATGGGACTTCCAGGATGCCTTGGCATTTTCCACTaGATGCTGAAAGCCGTACAGTTCAATGCGCCCAGCTTGATGTCA +
Preference number: 1 (lower is better)
Translates to: VYPRMGLPGCLGIFH*MLKAVQFNAPSLMS
Trigger: TGACATCAAGCTGGGCGCATTGAACTGTACGGCTTTCAGCATCCAGTGGAAAATGCCAAGGCATCCTGGAAGTCCCATCCTTGGGTACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504709.1
3UTR GCA 90 bp CCATCATGGGGATCTGCCAGTGAACCAGCTGTCTCTGGGGTCATGTaGTTGCATAGTAAAGGGACACAGCTCATGGTACAGAAGGAAGAA +
Preference number: 1 (lower is better)
Translates to: PSWGSASEPAVSGVM*LHSKGTQLMVQKEE
Trigger: TTCTTCCTTCTGTACCATGAGCTGTGTCCCTTTACTATGCAAGCACATGACCCCAGAGACAGCTGGTTCACTGGCAGATCCCCATGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322350.10
3UTR CCA 90 bp AGAGTAAAAGACAGTGTACCCAAGGATGGGACTTCCAGGATGCCTTaGCATTTTCCACTGGATGCTGAAAGCCGTACAGTTCAATGCGCC +
Preference number: 1 (lower is better)
Translates to: RVKDSVPKDGTSRMP*HFPLDAESRTVQCA
Trigger: GGCGCATTGAACTGTACGGCTTTCAGCATCCAGTGGAAAATGCCAAGGCATCCTGGAAGTCCCATCCTTGGGTACACTGTCTTTTACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504709.1
3UTR TCA 90 bp GGTCAGCTCCCCAAGTTGCCCACCCAAGTTACCTATCCATTCCACTaGCACCACAAAAGGCCCAAACAAGTCTCTCTTGGGAGAAATTTT +
Preference number: 1 (lower is better)
Translates to: GQLPKLPTQVTYPFH*HHKRPKQVSLGRNF
Trigger: AAAATTTCTCCCAAGAGAGACTTGTTTGGGCCTTTTGTGGTGTCAGTGGAATGGATAGGTAACTTGGGTGGGCAACTTGGGGAGCTGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322350.10
3UTR TCA 90 bp CTGTCTTGGTTCTCAGTTTCTCATCAGTGTGTACTTTCTTCTTGGTaGGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCA +
Preference number: 1 (lower is better)
Translates to: LSWFSVSHQCVLSSW*EETHLVPGPLHIAS
Trigger: TGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCTCACCAAGAAGAAAGTACACACTGATGAGAAACTGAGAACCAAGACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
3UTR CCA 90 bp AGCTATAGCAGACAGGCTCTGGAATTTGCATTGATGTGTGATCTCTaGCAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTAC +
Preference number: 1 (lower is better)
Translates to: SYSRQALEFALMCDL*QPLHIQWTKSDASY
Trigger: GTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTGCCAGAGATCACACATCAATGCAAATTCCAGAGCCTGTCTGCTATAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
3UTR CCA 90 bp GCCCAGCTTGATGTCAAGAGGAGGCCCTACCTTGCCTGTTCCAGTTaGACTGGTTGCCTTTTCTATCTAGTAAATATTTGTCATTCTAGC +
Preference number: 1 (lower is better)
Translates to: AQLDVKRRPYLACSS*TGCLFYLVNICHSS
Trigger: GCTAGAATGACAAATATTTACTAGATAGAAAAGGCAACCAGTCCAACTGGAACAGGCAAGGTAGGGCCTCCTCTTGACATCAAGCTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504709.1
3UTR CCA 90 bp GAATTTGCATTGATGTGTGATCTCTGGCAGCCGCTACATATTCAATaGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCA +
Preference number: 1 (lower is better)
Translates to: EFALMCDLWQPLHIQ*TKSDASYTENSAGS
Trigger: TGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTGCCAGAGATCACACATCAATGCAAATTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
3UTR CCA 90 bp CTTCATATTCATCCTCTTGAGCCGTCAACATTTACCAAAAGAGAATaGTCAGCTCCCCAAGTTGCCCACCCAAGTTACCTATCCATTCCA +
Preference number: 1 (lower is better)
Translates to: LHIHPLEPSTFTKRE*SAPQVAHPSYLSIP
Trigger: TGGAATGGATAGGTAACTTGGGTGGGCAACTTGGGGAGCTGACCATTCTCTTTTGGTAAATGTTGACGGCTCAAGAGGATGAATATGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322350.10
3UTR GCA 90 bp GATGTCAAGAGGAGGCCCTACCTTGCCTGTTCCAGTTGGACTGGTTaGCTTTTCTATCTAGTAAATATTTGTCATTCTAGCATCTCCTTC +
Preference number: 1 (lower is better)
Translates to: DVKRRPYLACSSWTG*LFYLVNICHSSISF
Trigger: GAAGGAGATGCTAGAATGACAAATATTTACTAGATAGAAAAGGCAACCAGTCCAACTGGAACAGGCAAGGTAGGGCCTCCTCTTGACATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504709.1
3UTR CCA 90 bp AATTATAGGCTCTTGCATAAGTTAGATCATATTTCACCCCCTCCTTaGGGGCAGTGTTCATCTCACCTTTCCCTTAGTAAGTCCATCATG +
Preference number: 1 (lower is better)
Translates to: NYRLLHKLDHISPPP*GQCSSHLSLSKSIM
Trigger: CATGATGGACTTACTAAGGGAAAGGTGAGATGAACACTGCCCCCAAGGAGGGGGTGAAATATGATCTAACTTATGCAAGAGCCTATAATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322350.10
3UTR-3UTR TCA 90 bp CCAGCCAGTGAGGAGTGGAAGGGGTTAATCCGAACAATCCAAGGGCCAATGTGGGCATCAGGCAGGGTCTaGGGGCCCCTGGGATTCTCA +
Preference number: 2 (lower is better)
Translates to: PASEEWKGLIRTIQGPMWASGRV*GPLGFS
Trigger: TGAGAATCCCAGGGGCCCTCAGACCCTGCCTGATGC...CCACATTGGCCCTTGGATTGTTCGGATTAACCCCTTCCACTCCTCACTGGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
3UTR-3UTR TCA 90 bp GGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGAGGCATCAGGCAGGGTCTaGGGGCCCCTGGGATTCTCA +
Preference number: 2 (lower is better)
Translates to: GQSPMLPTQRILLGQLVEASGRV*GPLGFS
Trigger: TGAGAATCCCAGGGGCCCTCAGACCCTGCCTGATGC...CTCCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
3UTR-3UTR TCA 90 bp GGCCACCCAGGGATGCCTGTCTTGGTTCTCAGTTTCTCATCAGTGTGTACTTTCGCATCAGGCAGGGTCTaGGGGCCCCTGGGATTCTCA +
Preference number: 2 (lower is better)
Translates to: GHPGMPVLVLSFSSVCTFASGRV*GPLGFS
Trigger: TGAGAATCCCAGGGGCCCTCAGACCCTGCCTGATGC...GAAAGTACACACTGATGAGAAACTGAGAACCAAGACAGGCATCCCTGGGTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
3UTR-3UTR TCA 90 bp GAATCTTGGGACAAAGTGGTGACATGCCGAGGAGAGCTCAGCCGCCCTTTGCCATCAATGCGCCCAGCTTaGTGTCAAGAGGAGGCCCTA +
Preference number: 2 (lower is better)
Translates to: ESWDKVVTCRGELSRPLPSMRPA*CQEEAL
Trigger: TAGGGCCTCCTCTTGACATCAAGCTGGGCGCATTGA...TGGCAAAGGGCGGCTGAGCTCTCCTCGGCATGTCACCACTTTGTCCCAAGATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504709.1
3UTR-3UTR GCA 90 bp GGAGGCAGGCAGGAATCTTGGGACAAAGTGGTGACATGCCGAGGAGAGCTCAGCCTGTGCAACTGCTCCTaGAGGGATTTATCTGCGCCA +
Preference number: 2 (lower is better)
Translates to: GGRQESWDKVVTCRGELSLCNCS*RDLSAP
Trigger: TGGCGCAGATAAATCCCTGCAGGAGCAGTTGCACAG...GCTGAGCTCTCCTCGGCATGTCACCACTTTGTCCCAAGATTCCTGCCTGCCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504709.1
3UTR-3UTR GCA 90 bp ACTCGCTCCAGGTTTCCAAGACAGGGCCACCTCAGAATCCGAAACCACAATGACAGCTCAGCCGCCCTTTaGCAGCCTGGCTGTAAGCTG +
Preference number: 2 (lower is better)
Translates to: TRSRFPRQGHLRIRNHNDSSAAL*QPGCKL
Trigger: CAGCTTACAGCCAGGCTGGCAAAGGGCGGCTGAGCT...GTCATTGTGGTTTCGGATTCTGAGGTGGCCCTGTCTTGGAAACCTGGAGCGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504709.1
3UTR-3UTR TCA 90 bp TCTCTGGCAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGCATCAGGCAGGGTCTaGGGGCCCCTGGGATTCTCA +
Preference number: 2 (lower is better)
Translates to: SLAAATYSMDKVRCFLHRASGRV*GPLGFS
Trigger: TGAGAATCCCAGGGGCCCTCAGACCCTGCCTGATGC...TCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTGCCAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
3UTR-3UTR TCA 90 bp CTGGCTGTAAGCTGCTATGCTCACACGATATTCAGTGCCTGGTTTCAAATCTCCTCGGGATGTCCCGGCTaGGAGGCACGCTGTGCAACT +
Preference number: 2 (lower is better)
Translates to: LAVSCYAHTIFSAWFQISSGCPG*EARCAT
Trigger: AGTTGCACAGCGTGCCTCTCAGCCGGGACATCCCGA...GGAGATTTGAAACCAGGCACTGAATATCGTGTGAGCATAGCAGCTTACAGCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504709.1
3UTR-3UTR GCA 90 bp TTCACTCGCTCCAGGTTTCCAAGACAGGGCCACCTCAGAATCCGAAACCACAATCTGAGAGGCACGCTGTaGAACTGCTCCTGCAGGGAT +
Preference number: 2 (lower is better)
Translates to: FTRSRFPRQGHLRIRNHNLRGTL*NCSCRD
Trigger: ATCCCTGCAGGAGCAGTTGCACAGCGTGCCTCTCAG...ATTGTGGTTTCGGATTCTGAGGTGGCCCTGTCTTGGAAACCTGGAGCGAGTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504709.1
3UTR-3UTR CCA 90 bp CCAGCCAGTGAGGAGTGGAAGGGGTTAATCCGAACAATCCAAGGGCCAATGTGGAACACACCTGGTCCCTaGGCCTCTGCATATAGCATC +
Preference number: 2 (lower is better)
Translates to: PASEEWKGLIRTIQGPMWNTPGP*ASAYSI
Trigger: GATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTT...CCACATTGGCCCTTGGATTGTTCGGATTAACCCCTTCCACTCCTCACTGGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
3UTR-3UTR GCA 90 bp GGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGAGAAGGCCACCCAGGGATaGCTGTCTTGGTTCTCAGTT +
Preference number: 2 (lower is better)
Translates to: GQSPMLPTQRILLGQLVEKATQG*LSWFSV
Trigger: AACTGAGAACCAAGACAGGCATCCCTGGGTGGCCTT...CTCCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
3UTR-3UTR GCA 90 bp TCACTCGCTCCAGGTTTCCAAGACAGGGCCACCTCAGAATCCGAAACCACAATGGGCACGCTGTGCAACTaGTCCTGCAGGGATTTATCT +
Preference number: 2 (lower is better)
Translates to: SLAPGFQDRATSESETTMGTLCN*SCRDLS
Trigger: AGATAAATCCCTGCAGGAGCAGTTGCACAGCGTGCC...CATTGTGGTTTCGGATTCTGAGGTGGCCCTGTCTTGGAAACCTGGAGCGAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504709.1
3UTR CAA 90 bp ATTTTCCACTGGATGCTGAAAGCCGTACAGTTCAATGCGCCCAGCTaGATGTCAAGAGGAGGCCCTACCTTGCCTGTTCCAGTTGGACTG +
Preference number: 2 (lower is better)
Translates to: IFHWMLKAVQFNAPS*MSRGGPTLPVPVGL
Trigger: CAGTCCAACTGGAACAGGCAAGGTAGGGCCTCCTCTTGACATCAAGCTGGGCGCATTGAACTGTACGGCTTTCAGCATCCAGTGGAAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504709.1
3UTR-3UTR TCA 90 bp CTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGGCATCAGGCAGGGTCTaGGGGCCCCTGGGATTCTCA +
Preference number: 2 (lower is better)
Translates to: LHIQWTKSDASYTENSAGASGRV*GPLGFS
Trigger: TGAGAATCCCAGGGGCCCTCAGACCCTGCCTGATGC...CCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
3UTR-3UTR GCA 90 bp CAGTGCCTGGTTTCAAATCTCCAATCACTTCCTCCGTGGTCGGGATGTCCCGGCCTGCAGGGATTTATCTaGGCCAACCTCAGAGTAAAA +
Preference number: 2 (lower is better)
Translates to: QCLVSNLQSLPPWSGCPGLQGFI*ANLRVK
Trigger: TTTTACTCTGAGGTTGGCGCAGATAAATCCCTGCAG...GCCGGGACATCCCGACCACGGAGGAAGTGATTGGAGATTTGAAACCAGGCACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504709.1
3UTR-3UTR CCA 90 bp TTCACTCGCTCCAGGTTTCCAAGACAGGGCCACCTCAGAATCCGAAACCACAATGGCAGGCAGGAATCTTaGGACAAAGTGGTGACATGC +
Preference number: 2 (lower is better)
Translates to: FTRSRFPRQGHLRIRNHNGRQES*DKVVTC
Trigger: GCATGTCACCACTTTGTCCCAAGATTCCTGCCTGCC...ATTGTGGTTTCGGATTCTGAGGTGGCCCTGTCTTGGAAACCTGGAGCGAGTGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504709.1
3UTR-3UTR TCA 90 bp TGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGAGTACTTTCTTCTTGGTaGGAGGAAACACACCTGGTC +
Preference number: 2 (lower is better)
Translates to: WTKSDASYTENSAGSARGVLSSW*EETHLV
Trigger: GACCAGGTGTGTTTCCTCTCACCAAGAAGAAAGTAC...TCCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
3UTR-3UTR TCA 90 bp TTCCAAGACAGGGCCACCTCAGAATCCGAAACCACAATGACATGTGGCTGCTGGTTTTCCACTGGATGCTaGAAGCCGTACAGTTCAATG +
Preference number: 2 (lower is better)
Translates to: FQDRATSESETTMTCGCWFSTGC*KPYSSM
Trigger: CATTGAACTGTACGGCTTTCAGCATCCAGTGGAAAA...CCAGCAGCCACATGTCATTGTGGTTTCGGATTCTGAGGTGGCCCTGTCTTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504709.1
3UTR-3UTR GCA 90 bp ACATTCGAGGTAAGCTCTGGGGAAGGGGGCCGCATTATGATTATGATTCTGTGTAAGGCCACCCAGGGATaGCTGTCTTGGTTCTCAGTT +
Preference number: 2 (lower is better)
Translates to: TFEVSSGEGGRIMIMILCKATQG*LSWFSV
Trigger: AACTGAGAACCAAGACAGGCATCCCTGGGTGGCCTT...ACACAGAATCATAATCATAATGCGGCCCCCTTCCCCAGAGCTTACCTCGAATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322350.10
3UTR-3UTR GCA 90 bp GATCTCTGGCAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAAAGGCCACCCAGGGATaGCTGTCTTGGTTCTCAGTT +
Preference number: 2 (lower is better)
Translates to: DLWQPLHIQWTKSDASYTKATQG*LSWFSV
Trigger: AACTGAGAACCAAGACAGGCATCCCTGGGTGGCCTT...TGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTGCCAGAGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
3UTR-3UTR GCA 90 bp CCAGCCAGTGAGGAGTGGAAGGGGTTAATCCGAACAATCCAAGGGCCAATGTGGATGGACAAAGTCCGATaGTTCCTACACAGAGAATTC +
Preference number: 2 (lower is better)
Translates to: PASEEWKGLIRTIQGPMWMDKVR*FLHREF
Trigger: GAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCAT...CCACATTGGCCCTTGGATTGTTCGGATTAACCCCTTCCACTCCTCACTGGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
3UTR-3UTR GCA 90 bp CCCTGCACAGCCTTGGGAACACTGATTGTATTAGTGTCCATTGGTATGAACCTGGTCAGCTCCCCAAGTTaGCCACCCAAGTTACCTATC +
Preference number: 2 (lower is better)
Translates to: PCTALGTLIVLVSIGMNLVSSPS*PPKLPI
Trigger: GATAGGTAACTTGGGTGGGCAACTTGGGGAGCTGAC...CAGGTTCATACCAATGGACACTAATACAATCAGTGTTCCCAAGGCTGTGCAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322350.10
3UTR-3UTR CCA 90 bp GATCTCTGGCAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAAACACACCTGGTCCCTaGGCCTCTGCATATAGCATC +
Preference number: 2 (lower is better)
Translates to: DLWQPLHIQWTKSDASYTNTPGP*ASAYSI
Trigger: GATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTT...TGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTGCCAGAGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
3UTR-3UTR CCA 90 bp TTCACTCGCTCCAGGTTTCCAAGACAGGGCCACCTCAGAATCCGAAACCACAATACTTCCAGGATGCCTTaGCATTTTCCACTGGATGCT +
Preference number: 2 (lower is better)
Translates to: FTRSRFPRQGHLRIRNHNTSRMP*HFPLDA
Trigger: AGCATCCAGTGGAAAATGCCAAGGCATCCTGGAAGT...ATTGTGGTTTCGGATTCTGAGGTGGCCCTGTCTTGGAAACCTGGAGCGAGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504709.1
3UTR CAA 90 bp ATGCCTGTCTTGGTTCTCAGTTTCTCATCAGTGTGTACTTTCTTCTaGGTGAGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGC +
Preference number: 2 (lower is better)
Translates to: MPVLVLSFSSVCTFF*VRGNTPGPWASAYS
Trigger: GCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCTCACCAAGAAGAAAGTACACACTGATGAGAAACTGAGAACCAAGACAGGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
3UTR-3UTR TCA 90 bp AATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGTACTTTCTTCTTGGTaGGAGGAAACACACCTGGTC +
Preference number: 2 (lower is better)
Translates to: NGQSPMLPTQRILLGQLVVLSSW*EETHLV
Trigger: GACCAGGTGTGTTTCCTCTCACCAAGAAGAAAGTAC...CACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
3UTR-3UTR GCA 90 bp CAGGCTCTGGAATTTGCATTGATGTGTGATCTCTGGCAGCCGCTACATATTCAAAAGGCCACCCAGGGATaGCTGTCTTGGTTCTCAGTT +
Preference number: 2 (lower is better)
Translates to: QALEFALMCDLWQPLHIQKATQG*LSWFSV
Trigger: AACTGAGAACCAAGACAGGCATCCCTGGGTGGCCTT...TTGAATATGTAGCGGCTGCCAGAGATCACACATCAATGCAAATTCCAGAGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
3UTR-3UTR GCA 90 bp CCAAGACAGGGCCACCTCAGAATCCGAAACCACAATGACATGTGGCTGCTGGGGTCCAGTTGGACTGGTTaGCTTTTCTATCTAGTAAAT +
Preference number: 2 (lower is better)
Translates to: PRQGHLRIRNHNDMWLLGSSWTG*LFYLVN
Trigger: ATTTACTAGATAGAAAAGGCAACCAGTCCAACTGGA...CCCCAGCAGCCACATGTCATTGTGGTTTCGGATTCTGAGGTGGCCCTGTCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504709.1
3UTR-3UTR TCA 90 bp TTCACATTCGAGGTAAGCTCTGGGGAAGGGGGCCGCATTATGATTATGATTCTGATTTGCATTGATGTGTaGTCTCTGGCAGCCGCTACA +
Preference number: 2 (lower is better)
Translates to: FTFEVSSGEGGRIMIMILICIDV*SLAAAT
Trigger: TGTAGCGGCTGCCAGAGATCACACATCAATGCAAAT...CAGAATCATAATCATAATGCGGCCCCCTTCCCCAGAGCTTACCTCGAATGTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322350.10
3UTR-3UTR CCA 90 bp AGTAAAAGACAGTGTACCCAAGGATGGGACTTCCAGGATGCCTTGGCATTTTCCATCCCTCTCCTGGATTaGATCTTCTGTTTCCTGCAG +
Preference number: 2 (lower is better)
Translates to: SKRQCTQGWDFQDALAFSIPLLD*IFCFLQ
Trigger: CTGCAGGAAACAGAAGATCCAATCCAGGAGAGGGAT...GGAAAATGCCAAGGCATCCTGGAAGTCCCATCCTTGGGTACACTGTCTTTTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504709.1
3UTR-3UTR CCA 90 bp TCACTCGCTCCAGGTTTCCAAGACAGGGCCACCTCAGAATCCGAAACCACAATGACGATATTCAGTGCCTaGTTTCAAATCTCCAATCAC +
Preference number: 2 (lower is better)
Translates to: SLAPGFQDRATSESETTMTIFSA*FQISNH
Trigger: GTGATTGGAGATTTGAAACCAGGCACTGAATATCGT...CATTGTGGTTTCGGATTCTGAGGTGGCCCTGTCTTGGAAACCTGGAGCGAGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504709.1
3UTR-3UTR GCA 90 bp TATGCTCACACGATATTCAGTGCCTGGTTTCAAATCTCCAATCACTTCCTCCGTAGCCGTACAGTTCAATaGGCCCAGCTTGATGTCAAG +
Preference number: 2 (lower is better)
Translates to: YAHTIFSAWFQISNHFLRSRTVQ*AQLDVK
Trigger: CTTGACATCAAGCTGGGCGCATTGAACTGTACGGCT...ACGGAGGAAGTGATTGGAGATTTGAAACCAGGCACTGAATATCGTGTGAGCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504709.1
3UTR CAA 90 bp ACAACACAGTCACTGAGCTATAGCAGACAGGCTCTGGAATTTGCATaGATGTGTGATCTCTGGCAGCCGCTACATATTCAATGGACAAAG +
Preference number: 2 (lower is better)
Translates to: TTQSLSYSRQALEFA*MCDLWQPLHIQWTK
Trigger: CTTTGTCCATTGAATATGTAGCGGCTGCCAGAGATCACACATCAATGCAAATTCCAGAGCCTGTCTGCTATAGCTCAGTGACTGTGTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
3UTR-3UTR GCA 90 bp ACAGCCTTGGGAACACTGATTGTATTAGTGTCCATTGGTATGAACCTGACCTCCGTCACACAGTCATTCTaGTGTCAGGAAGAGTGTCAT +
Preference number: 2 (lower is better)
Translates to: TALGTLIVLVSIGMNLTSVTQSF*CQEECH
Trigger: ATGACACTCTTCCTGACAGCAGAATGACTGTGTGAC...GGAGGTCAGGTTCATACCAATGGACACTAATACAATCAGTGTTCCCAAGGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322350.10
3UTR CAA 90 bp TGCACAAACAAATGTAGAGTCGAGACTGGGACTAATTATAGGCTCTaGCATAAGTTAGATCATATTTCACCCCCTCCTTGGGGGCAGTGT +
Preference number: 2 (lower is better)
Translates to: CTNKCRVETGTNYRL*HKLDHISPPPWGQC
Trigger: ACACTGCCCCCAAGGAGGGGGTGAAATATGATCTAACTTATGCAAGAGCCTATAATTAGTCCCAGTCTCGACTCTACATTTGTTTGTGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000322350.10
3UTR-3UTR CCA 90 bp AGTAAAAGACAGTGTACCCAAGGATGGGACTTCCAGGATGCCTTGGCATTTTCCTTCCCACTATTATTCTaGGGACTTCTTATATCCCTC +
Preference number: 2 (lower is better)
Translates to: SKRQCTQGWDFQDALAFSFPLLF*GLLISL
Trigger: GAGGGATATAAGAAGTCCCCAGAATAATAGTGGGAA...GGAAAATGCCAAGGCATCCTGGAAGTCCCATCCTTGGGTACACTGTCTTTTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504709.1
3UTR CAA 90 bp CCTATCCATTCCACTGACACCACAAAAGGCCCAAACAAGTCTCTCTaGGGAGAAATTTTTAGGAAAGGTGTGCAAGAATTCAGAGTCATC +
Preference number: 2 (lower is better)
Translates to: PIHSTDTTKGPNKSL*GEIFRKGVQEFRVI
Trigger: GATGACTCTGAATTCTTGCACACCTTTCCTAAAAATTTCTCCCAAGAGAGACTTGTTTGGGCCTTTTGTGGTGTCAGTGGAATGGATAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322350.10
3UTR-3UTR CCA 90 bp CTTATCTTGGAAAGCTTCATATTCATCCTCTTGAGCCGTCAACATTTACCAAAAAACACACCTGGTCCCTaGGCCTCTGCATATAGCATC +
Preference number: 2 (lower is better)
Translates to: LILESFIFILLSRQHLPKNTPGP*ASAYSI
Trigger: GATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTT...TTTTGGTAAATGTTGACGGCTCAAGAGGATGAATATGAAGCTTTCCAAGATAAG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000322350.10
3UTR-3UTR TCA 90 bp CTTATCTTGGAAAGCTTCATATTCATCCTCTTGAGCCGTCAACATTTACCAAAAACCTATCCATTCCACTaGCACCACAAAAGGCCCAAA +
Preference number: 2 (lower is better)
Translates to: LILESFIFILLSRQHLPKTYPFH*HHKRPK
Trigger: TTTGGGCCTTTTGTGGTGTCAGTGGAATGGATAGGT...TTTTGGTAAATGTTGACGGCTCAAGAGGATGAATATGAAGCTTTCCAAGATAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322350.10
3UTR-3UTR CCA 90 bp AGAGTCGAGACTGGGACTAATTATAGGCTCTTGCATAAGTTAGATCATATTTCACCGCTACATATTCAATaGACAAAGTCCGATGCTTCC +
Preference number: 2 (lower is better)
Translates to: RVETGTNYRLLHKLDHISPLHIQ*TKSDAS
Trigger: GGAAGCATCGGACTTTGTCCATTGAATATGTAGCGG...TGAAATATGATCTAACTTATGCAAGAGCCTATAATTAGTCCCAGTCTCGACTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322350.10
3UTR GCA 72 bp GGAGGCAGGCAGGAATCTTGGGACAAAGTGGTGACATaGCGAGGAGAGCTCAGCCGCCCTTTGCCAGCCTGG +
Preference number: 3 (lower is better)
Translates to: GGRQESWDKVVT*RGELSRPLPAW
Trigger: CCAGGCTGGCAAAGGGCGGCTGAGCTCTCCTCGGCATGTCACCACTTTGTCCCAAGATTCCTGCCTGCCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504709.1
3UTR TCA 72 bp CTCCAATCACTTCCTCCGTGGTCGGGATGTCCCGGCTaGGAGGCACGCTGTGCAACTGCTCCTGCAGGGATT +
Preference number: 3 (lower is better)
Translates to: LQSLPPWSGCPG*EARCATAPAGI
Trigger: AATCCCTGCAGGAGCAGTTGCACAGCGTGCCTCTCAGCCGGGACATCCCGACCACGGAGGAAGTGATTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504709.1
3UTR GCA 72 bp GTCGGGATGTCCCGGCTGAGAGGCACGCTGTGCAACTaGTCCTGCAGGGATTTATCTGCGCCAACCTCAGAG +
Preference number: 3 (lower is better)
Translates to: VGMSRLRGTLCN*SCRDLSAPTSE
Trigger: CTCTGAGGTTGGCGCAGATAAATCCCTGCAGGAGCAGTTGCACAGCGTGCCTCTCAGCCGGGACATCCCGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504709.1
3UTR-3UTR CAA 90 bp AGGGGCGCTTCCTTCACTCGCTCCAGGTTTCCAAGACAGGGCCACCTCAGAATCAGAGGAGGCCCTACCTaGCCTGTTCCAGTTGGACTG +
Preference number: 3 (lower is better)
Translates to: RGASFTRSRFPRQGHLRIRGGPT*PVPVGL
Trigger: CAGTCCAACTGGAACAGGCAAGGTAGGGCCTCCTCT...GATTCTGAGGTGGCCCTGTCTTGGAAACCTGGAGCGAGTGAAGGAAGCGCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504709.1
3UTR-3UTR CAA 90 bp GGTCGGGATGTCCCGGCTGAGAGGCACGCTGTGCAACTGCTCCTGCAGGGATTTCCTTGCCTGTTCCAGTaGGACTGGTTGCCTTTTCTA +
Preference number: 3 (lower is better)
Translates to: GRDVPAERHAVQLLLQGFPCLFQ*DWLPFL
Trigger: TAGAAAAGGCAACCAGTCCAACTGGAACAGGCAAGG...AAATCCCTGCAGGAGCAGTTGCACAGCGTGCCTCTCAGCCGGGACATCCCGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504709.1
3UTR-3UTR CAA 90 bp CTGAATAGGGGCGCTTCCTTCACTCGCTCCAGGTTTCCAAGACAGGGCCACCTCTTCAATGCGCCCAGCTaGATGTCAAGAGGAGGCCCT +
Preference number: 3 (lower is better)
Translates to: LNRGASFTRSRFPRQGHLFNAPS*MSRGGP
Trigger: AGGGCCTCCTCTTGACATCAAGCTGGGCGCATTGAA...GAGGTGGCCCTGTCTTGGAAACCTGGAGCGAGTGAAGGAAGCGCCCCTATTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504709.1
3UTR-3UTR CAA 90 bp AGGGGCGCTTCCTTCACTCGCTCCAGGTTTCCAAGACAGGGCCACCTCAGAATCAGGCAGGCAGGAATCTaGGGACAAAGTGGTGACATG +
Preference number: 3 (lower is better)
Translates to: RGASFTRSRFPRQGHLRIRQAGI*GQSGDM
Trigger: CATGTCACCACTTTGTCCCAAGATTCCTGCCTGCCT...GATTCTGAGGTGGCCCTGTCTTGGAAACCTGGAGCGAGTGAAGGAAGCGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504709.1
3UTR GCA 72 bp AGAGCTCAGCCGCCCTTTGCCAGCCTGGCTGTAAGCTaGTATGCTCACACGATATTCAGTGCCTGGTTTCAA +
Preference number: 3 (lower is better)
Translates to: RAQPPFASLAVS*YAHTIFSAWFQ
Trigger: TTGAAACCAGGCACTGAATATCGTGTGAGCATAGCAGCTTACAGCCAGGCTGGCAAAGGGCGGCTGAGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504709.1
3UTR CCA 72 bp AGGATGGGACTTCCAGGATGCCTTGGCATTTTCCACTaGATGCTGAAAGCCGTACAGTTCAATGCGCCCAGC +
Preference number: 3 (lower is better)
Translates to: RMGLPGCLGIFH*MLKAVQFNAPS
Trigger: GCTGGGCGCATTGAACTGTACGGCTTTCAGCATCCAGTGGAAAATGCCAAGGCATCCTGGAAGTCCCATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504709.1
3UTR GCA 72 bp CTGCCAGTGAACCAGCTGTCTCTGGGGTCATGTGCTTaGATAGTAAAGGGACACAGCTCATGGTACAGAAGG +
Preference number: 3 (lower is better)
Translates to: LPVNQLSLGSCA*IVKGHSSWYRR
Trigger: CCTTCTGTACCATGAGCTGTGTCCCTTTACTATGCAAGCACATGACCCCAGAGACAGCTGGTTCACTGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322350.10
3UTR GCA 72 bp GGATCTGCCAGTGAACCAGCTGTCTCTGGGGTCATGTaGTTGCATAGTAAAGGGACACAGCTCATGGTACAG +
Preference number: 3 (lower is better)
Translates to: GSASEPAVSGVM*LHSKGTQLMVQ
Trigger: CTGTACCATGAGCTGTGTCCCTTTACTATGCAAGCACATGACCCCAGAGACAGCTGGTTCACTGGCAGATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322350.10
3UTR GCA 72 bp TCAGCCGCCCTTTGCCAGCCTGGCTGTAAGCTGCTATaGTCACACGATATTCAGTGCCTGGTTTCAAATCTC +
Preference number: 3 (lower is better)
Translates to: SAALCQPGCKLL*SHDIQCLVSNL
Trigger: GAGATTTGAAACCAGGCACTGAATATCGTGTGAGCATAGCAGCTTACAGCCAGGCTGGCAAAGGGCGGCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504709.1
3UTR-3UTR CAA 90 bp TTCACTCGCTCCAGGTTTCCAAGACAGGGCCACCTCAGAATCCGAAACCACAATGACTTCCAGGATGCCTaGGCATTTTCCACTGGATGC +
Preference number: 3 (lower is better)
Translates to: FTRSRFPRQGHLRIRNHNDFQDA*AFSTGC
Trigger: GCATCCAGTGGAAAATGCCAAGGCATCCTGGAAGTC...ATTGTGGTTTCGGATTCTGAGGTGGCCCTGTCTTGGAAACCTGGAGCGAGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504709.1
3UTR GCA 72 bp CTGGCAGCCGCTACATATTCAATGGACAAAGTCCGATaGTTCCTACACAGAGAATTCTGCTGGGTCAGCTCG +
Preference number: 3 (lower is better)
Translates to: LAAATYSMDKVR*FLHREFCWVSS
Trigger: CGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
3UTR GCA 72 bp CATTTTCCACTGGATGCTGAAAGCCGTACAGTTCAATaGGCCCAGCTTGATGTCAAGAGGAGGCCCTACCTT +
Preference number: 3 (lower is better)
Translates to: HFPLDAESRTVQ*AQLDVKRRPYL
Trigger: AAGGTAGGGCCTCCTCTTGACATCAAGCTGGGCGCATTGAACTGTACGGCTTTCAGCATCCAGTGGAAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504709.1
3UTR CCA 72 bp AGTGTTCATCTCACCTTTCCCTTAGTAAGTCCATCATaGGGATCTGCCAGTGAACCAGCTGTCTCTGGGGTC +
Preference number: 3 (lower is better)
Translates to: SVHLTFPLVSPS*GSASEPAVSGV
Trigger: GACCCCAGAGACAGCTGGTTCACTGGCAGATCCCCATGATGGACTTACTAAGGGAAAGGTGAGATGAACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322350.10
3UTR CCA 72 bp GACAGTGTACCCAAGGATGGGACTTCCAGGATGCCTTaGCATTTTCCACTGGATGCTGAAAGCCGTACAGTT +
Preference number: 3 (lower is better)
Translates to: DSVPKDGTSRMP*HFPLDAESRTV
Trigger: AACTGTACGGCTTTCAGCATCCAGTGGAAAATGCCAAGGCATCCTGGAAGTCCCATCCTTGGGTACACTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504709.1
3UTR CCA 72 bp GCTGTAAGCTGCTATGCTCACACGATATTCAGTGCCTaGTTTCAAATCTCCAATCACTTCCTCCGTGGTCGG +
Preference number: 3 (lower is better)
Translates to: AVSCYAHTIFSA*FQISNHFLRGR
Trigger: CCGACCACGGAGGAAGTGATTGGAGATTTGAAACCAGGCACTGAATATCGTGTGAGCATAGCAGCTTACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504709.1
3UTR TCA 72 bp TTCTCAGTTTCTCATCAGTGTGTACTTTCTTCTTGGTaGGAGGAAACACACCTGGTCCCTGGGCCTCTGCAT +
Preference number: 3 (lower is better)
Translates to: FSVSHQCVLSSW*EETHLVPGPLH
Trigger: ATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCTCACCAAGAAGAAAGTACACACTGATGAGAAACTGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
ENST00000506135.5
3UTR CCA 72 bp CATCCTCTTGAGCCGTCAACATTTACCAAAAGAGAATaGTCAGCTCCCCAAGTTGCCCACCCAAGTTACCTA +
Preference number: 3 (lower is better)
Translates to: HPLEPSTFTKRE*SAPQVAHPSYL
Trigger: TAGGTAACTTGGGTGGGCAACTTGGGGAGCTGACCATTCTCTTTTGGTAAATGTTGACGGCTCAAGAGGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322350.10
3UTR-3UTR CAA 90 bp GATCTCTGGCAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGTGTGTACTTTCTTCTaGGTGAGAGGAAACACACCT +
Preference number: 3 (lower is better)
Translates to: DLWQPLHIQWTKSDASYTVCTFF*VRGNTP
Trigger: AGGTGTGTTTCCTCTCACCAAGAAGAAAGTACACAC...TGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTGCCAGAGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
3UTR-3UTR CAA 90 bp TCTGGCAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAGTGTGTACTTTCTTCTaGGTGAGAGGAAACACACCT +
Preference number: 3 (lower is better)
Translates to: SGSRYIFNGQSPMLPTQRVCTFF*VRGNTP
Trigger: AGGTGTGTTTCCTCTCACCAAGAAGAAAGTACACAC...TCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTGCCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
3UTR-3UTR CAA 90 bp GCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCGTGTGTACTTTCTTCTaGGTGAGAGGAAACACACCT +
Preference number: 3 (lower is better)
Translates to: AATYSMDKVRCFLHREFCVCTFF*VRGNTP
Trigger: AGGTGTGTTTCCTCTCACCAAGAAGAAAGTACACAC...GCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
3UTR CCA 72 bp CCACTATTATTCTGGGGACTTCTTATATCCCTCTCCTaGATTGGATCTTCTGTTTCCTGCAGCTTTGGTCCT +
Preference number: 3 (lower is better)
Translates to: PLLFWGLLISLS*IGSSVSCSFGP
Trigger: AGGACCAAAGCTGCAGGAAACAGAAGATCCAATCCAGGAGAGGGATATAAGAAGTCCCCAGAATAATAGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504709.1
3UTR-3UTR CAA 90 bp CAACTGCTCCTGCAGGGATTTATCTGCGCCAACCTCAGAGTAAAAGACAGTGTATTCCAGTTGGACTGGTaGCCTTTTCTATCTAGTAAA +
Preference number: 3 (lower is better)
Translates to: QLLLQGFICANLRVKDSVFQLDW*PFLSSK
Trigger: TTTACTAGATAGAAAAGGCAACCAGTCCAACTGGAA...TACACTGTCTTTTACTCTGAGGTTGGCGCAGATAAATCCCTGCAGGAGCAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504709.1
3UTR GCA 72 bp AGGAGGCCCTACCTTGCCTGTTCCAGTTGGACTGGTTaGCTTTTCTATCTAGTAAATATTTGTCATTCTAGC +
Preference number: 3 (lower is better)
Translates to: RRPYLACSSWTG*LFYLVNICHSS
Trigger: GCTAGAATGACAAATATTTACTAGATAGAAAAGGCAACCAGTCCAACTGGAACAGGCAAGGTAGGGCCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504709.1
3UTR CCA 72 bp TTGATGTGTGATCTCTGGCAGCCGCTACATATTCAATaGACAAAGTCCGATGCTTCCTACACAGAGAATTCT +
Preference number: 3 (lower is better)
Translates to: LMCDLWQPLHIQ*TKSDASYTENS
Trigger: AGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTGCCAGAGATCACACATCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
3UTR CCA 72 bp CACAGCCTTGGGAACACTGATTGTATTAGTGTCCATTaGTATGAACCTGACCTCCGCAAAATCAGTAACAAC +
Preference number: 3 (lower is better)
Translates to: HSLGNTDCISVH*YEPDLRKISNN
Trigger: GTTGTTACTGATTTTGCGGAGGTCAGGTTCATACCAATGGACACTAATACAATCAGTGTTCCCAAGGCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322350.10
3UTR CCA 72 bp CAAGAGGAGGCCCTACCTTGCCTGTTCCAGTTGGACTaGTTGCCTTTTCTATCTAGTAAATATTTGTCATTC +
Preference number: 3 (lower is better)
Translates to: QEEALPCLFQLD*LPFLSSKYLSF
Trigger: GAATGACAAATATTTACTAGATAGAAAAGGCAACCAGTCCAACTGGAACAGGCAAGGTAGGGCCTCCTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504709.1
3UTR CCA 72 bp ATTTGTCATTCTAGCATCTCCTTCCCACTATTATTCTaGGGACTTCTTATATCCCTCTCCTGGATTGGATCT +
Preference number: 3 (lower is better)
Translates to: ICHSSISFPLLF*GLLISLSWIGS
Trigger: AGATCCAATCCAGGAGAGGGATATAAGAAGTCCCCAGAATAATAGTGGGAAGGAGATGCTAGAATGACAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504709.1
3UTR CCA 72 bp GTCAGGGAAGGAGAGAAGTATTTTAATAGTGCCCTGTaGGATTCTTTCTCTCTCTCTCTCTTTTTAATGTAC +
Preference number: 3 (lower is better)
Translates to: VREGEKYFNSAL*DSFSLSLFLMY
Trigger: GTACATTAAAAAGAGAGAGAGAGAGAAAGAATCCCACAGGGCACTATTAAAATACTTCTCTCCTTCCCTGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
3UTR CCA 72 bp AGAGTCATCCACCCAAACTTCCAAAAGTATACTGTGTaGACAATCTGCAGCTATAAAAATATACACATACAA +
Preference number: 3 (lower is better)
Translates to: RVIHPNFQKYTV*TICSYKNIHIQ
Trigger: TTGTATGTGTATATTTTTATAGCTGCAGATTGTCCACACAGTATACTTTTGGAAGTTTGGGTGGATGACTCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322350.10
CDS-3UTR CCA 90 bp ACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGAGGGCCCCTCATAGCCCTCCTTCCTaGGCCGGCAGCTGCCCCCAT +
Preference number: 4 (lower is better)
Translates to: TPGPWASAYSIRQGLRAPHSPPS*AGSCPH
Trigger: ATGGGGGCAGCTGCCGGCCCAGGAAGGAGGGCTATG...AGGGGCCCTCAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR GCA 90 bp AACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGAGGGCCCACCTTTGCCCAGGGTaGACTGGCATCGCGAGCCCC +
Preference number: 4 (lower is better)
Translates to: NTPGPWASAYSIRQGLRAHLCPG*TGIASP
Trigger: GGGGCTCGCGATGCCAGTGCACCCTGGGCAAAGGTG...GGCCCTCAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
CDS-3UTR CCA 90 bp ACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGAGGGCCCCTGCCAGCTGCGGGGGCTaGGGCCATGGGAATTCATTG +
Preference number: 4 (lower is better)
Translates to: TPGPWASAYSIRQGLRAPASCGG*GHGNSL
Trigger: CAATGAATTCCCATGGCCCCAGCCCCCGCAGCTGGC...AGGGGCCCTCAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS-3UTR CCA 90 bp ACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGAGGGCCCCTCGCTGTTGGGTCTCATaGGGCTGTCTCCCCTCCACA +
Preference number: 4 (lower is better)
Translates to: TPGPWASAYSIRQGLRAPRCWVS*GCLPST
Trigger: TGTGGAGGGGAGACAGCCCCATGAGACCCAACAGCG...AGGGGCCCTCAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
ENST00000506135.5
CDS-3UTR TCA 90 bp AGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGGGCAGAGGGTCCGGATaGTGTCACTGGGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: RGNTPGPWASAYSIRQGLGRGSG*CHWASC
Trigger: GCAGCTGGCCCAGTGACATCATCCGGACCCTCTGCC...CAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS-3UTR TCA 90 bp CCAGCCAGTGAGGAGTGGAAGGGGTTAATCCGAACAATCCAAGGGCCAATGTGGGTCGGCGTGCGCGAGTaGAGCCGGCTGCAAGCTGCA +
Preference number: 4 (lower is better)
Translates to: PASEEWKGLIRTIQGPMWVGVRE*SRLQAA
Trigger: TGCAGCTTGCAGCCGGCTTCACTCGCGCACGCCGAC...CCACATTGGCCCTTGGATTGTTCGGATTAACCCCTTCCACTCCTCACTGGCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354891.7
CDS-3UTR GCA 90 bp CGGGATGTCCCGGCTGAGAGGCACGCTGTGCAACTGCTCCTGCAGGGATTTATCAGCTCAGCCGCCCTTTaGCAGCCTGGCTGTAAGCTG +
Preference number: 4 (lower is better)
Translates to: RDVPAERHAVQLLLQGFISSAAL*QPGCKL
Trigger: CAGCTTACAGCCAGGCTGGCAAAGGGCGGCTGAGCT...GATAAATCCCTGCAGGAGCAGTTGCACAGCGTGCCTCTCAGCCGGGACATCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504709.1
CDS-3UTR GCA 90 bp ACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGAGGGCCCCTGACAAAGTGGTGACATaGCGAGGAGAGCTCAGCCGC +
Preference number: 4 (lower is better)
Translates to: TPGPWASAYSIRQGLRAPDKVVT*RGELSR
Trigger: GCGGCTGAGCTCTCCTCGGCATGTCACCACTTTGTC...AGGGGCCCTCAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS-3UTR GCA 90 bp ACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGAGGGCCCCTCTCCACGTGGCCCCCTaGCAAGTTGATGGACAGGAA +
Preference number: 4 (lower is better)
Translates to: TPGPWASAYSIRQGLRAPLHVAP*QVDGQE
Trigger: TTCCTGTCCATCAACTTGGCAGGGGGCCACGTGGAG...AGGGGCCCTCAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR GCA 90 bp TGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGAGCCGGGAGGTCGGCGTaGGCGAGTGAAGCCGGCTGC +
Preference number: 4 (lower is better)
Translates to: WTKSDASYTENSAGSARGAGRSA*ASEAGC
Trigger: GCAGCCGGCTTCACTCGCGCACGCCGACCTCCCGGC...TCCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354891.7
CDS-3UTR CCA 90 bp AACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGAGGGCCCGCTGTTGGGTCTCATaGGGCTGTCTCCCCTCCACA +
Preference number: 4 (lower is better)
Translates to: NTPGPWASAYSIRQGLRARCWVS*GCLPST
Trigger: TGTGGAGGGGAGACAGCCCCATGAGACCCAACAGCG...GGCCCTCAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
ENST00000506135.5
CDS-3UTR CCA 90 bp ACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGAGGGCCCCTTGCTGGGTCAGCTCGTaGAGTGTCAGCAGGAAAGGC +
Preference number: 4 (lower is better)
Translates to: TPGPWASAYSIRQGLRAPCWVSS*SVSRKG
Trigger: GCCTTTCCTGCTGACACTCCACGAGCTGACCCAGCA...AGGGGCCCTCAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR TCA 90 bp ACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGAGGGCCCCTCACGGTTATCTTTCCTaGCTGGCCATCCCTAACGGC +
Preference number: 4 (lower is better)
Translates to: TPGPWASAYSIRQGLRAPHGYLS*LAIPNG
Trigger: GCCGTTAGGGATGGCCAGTCAGGAAAGATAACCGTG...AGGGGCCCTCAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
ENST00000506135.5
CDS-3UTR TCA 90 bp GTGAGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTGCATCAGGCAGGGTCTaGGGGCCCCTGGGATTCTCA +
Preference number: 4 (lower is better)
Translates to: VRGNTPGPWASAYSIRQGASGRV*GPLGFS
Trigger: TGAGAATCCCAGGGGCCCTCAGACCCTGCCTGATGC...ACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
ENST00000506135.5
CDS-3UTR TCA 90 bp AGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGGCATCAGGCAGGGTCTaGGGGCCCCTGGGATTCTCA +
Preference number: 4 (lower is better)
Translates to: RGNTPGPWASAYSIRQGLASGRV*GPLGFS
Trigger: TGAGAATCCCAGGGGCCCTCAGACCCTGCCTGATGC...CAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
ENST00000506135.5
CDS-3UTR GCA 90 bp ACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGAGGGCCCCTCTCAAGCCACCTGCATaGAGCGTATCTGTGTGCCAG +
Preference number: 4 (lower is better)
Translates to: TPGPWASAYSIRQGLRAPLKPPA*SVSVCQ
Trigger: CTGGCACACAGATACGCTGCATGCAGGTGGCTTGAG...AGGGGCCCTCAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336740.10
ENST00000397202.6
CDS-3UTR CCA 90 bp GGCCACCCAGGGATGCCTGTCTTGGTTCTCAGTTTCTCATCAGTGTGTACTTTCCGCCGGGTCCGAGGCTaGAAGCCAGGAGCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: GHPGMPVLVLSFSSVCTFRRVRG*KPGAGA
Trigger: GGCTCCTGCTCCTGGCTTCCAGCCTCGGACCCGGCG...GAAAGTACACACTGATGAGAAACTGAGAACCAAGACAGGCATCCCTGGGTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS-3UTR CCA 90 bp AGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGTGCCTGGTTTTCGGATaGCCGCTCGGAGCGACACCG +
Preference number: 4 (lower is better)
Translates to: RGNTPGPWASAYSIRQGLCLVFG*PLGATP
Trigger: CGGTGTCGCTCCGAGCGGCCATCCGAAAACCAGGCA...CAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS-3UTR CCA 90 bp CCAGCCAGTGAGGAGTGGAAGGGGTTAATCCGAACAATCCAAGGGCCAATGTGGCATAGCCCTCCTTCCTaGGCCGGCAGCTGCCCCCAT +
Preference number: 4 (lower is better)
Translates to: PASEEWKGLIRTIQGPMWHSPPS*AGSCPH
Trigger: ATGGGGGCAGCTGCCGGCCCAGGAAGGAGGGCTATG...CCACATTGGCCCTTGGATTGTTCGGATTAACCCCTTCCACTCCTCACTGGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322350.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR CCA 90 bp TTGGTGAGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGCATAGCCCTCCTTCCTaGGCCGGCAGCTGCCCCCAT +
Preference number: 4 (lower is better)
Translates to: LVRGNTPGPWASAYSIRQHSPPS*AGSCPH
Trigger: ATGGGGGCAGCTGCCGGCCCAGGAAGGAGGGCTATG...CTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCTCACCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR CCA 90 bp AGGGGCGCTTCCTTCACTCGCTCCAGGTTTCCAAGACAGGGCCACCTCAGAATCTTCCTGGTTTTCGGATaGCCGCTCGGAGCGACACCG +
Preference number: 4 (lower is better)
Translates to: RGASFTRSRFPRQGHLRIFLVFG*PLGATP
Trigger: CGGTGTCGCTCCGAGCGGCCATCCGAAAACCAGGAA...GATTCTGAGGTGGCCCTGTCTTGGAAACCTGGAGCGAGTGAAGGAAGCGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504709.1
CDS-3UTR TCA 90 bp CGGGATGTCCCGGCTGAGAGGCACGCTGTGCAACTGCTCCTGCAGGGATTTATCTCAATGCGCCCAGCTTaGTGTCAAGAGGAGGCCCTA +
Preference number: 4 (lower is better)
Translates to: RDVPAERHAVQLLLQGFISMRPA*CQEEAL
Trigger: TAGGGCCTCCTCTTGACATCAAGCTGGGCGCATTGA...GATAAATCCCTGCAGGAGCAGTTGCACAGCGTGCCTCTCAGCCGGGACATCCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504709.1
CDS-3UTR TCA 90 bp GTAAGTCCATCATGGGGATCTGCCAGTGAACCAGCTGTCTCTGGGGTCATGTGCTCGGGATGTCCCGGCTaGGAGGCACGCTGTGCAACT +
Preference number: 4 (lower is better)
Translates to: VSPSWGSASEPAVSGVMCSGCPG*EARCAT
Trigger: AGTTGCACAGCGTGCCTCTCAGCCGGGACATCCCGA...GCACATGACCCCAGAGACAGCTGGTTCACTGGCAGATCCCCATGATGGACTTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322350.10
CDS-3UTR TCA 90 bp AACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGAGGGCCAGGAGCCATTCACCATaGTGGATGCCACACCACTGC +
Preference number: 4 (lower is better)
Translates to: NTPGPWASAYSIRQGLRARSHSP*WMPHHC
Trigger: GCAGTGGTGTGGCATCCATCATGGTGAATGGCTCCT...GGCCCTCAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
ENST00000506135.5
CDS-3UTR GCA 90 bp AGGGGCGCTTCCTTCACTCGCTCCAGGTTTCCAAGACAGGGCCACCTCAGAATCGACAAAGTGGTGACATaGCGAGGAGAGCTCAGCCGC +
Preference number: 4 (lower is better)
Translates to: RGASFTRSRFPRQGHLRIDKVVT*RGELSR
Trigger: GCGGCTGAGCTCTCCTCGGCATGTCACCACTTTGTC...GATTCTGAGGTGGCCCTGTCTTGGAAACCTGGAGCGAGTGAAGGAAGCGCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504709.1
CDS-3UTR GCA 90 bp AACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGAGGGCCCACAGATTCCACTGCTaGATTCCCCCACATCAGCCC +
Preference number: 4 (lower is better)
Translates to: NTPGPWASAYSIRQGLRAHRFHC*IPPHQP
Trigger: GGGCTGATGTGGGGGAATGCAGCAGTGGAATCTGTG...GGCCCTCAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
CDS-3UTR GCA 90 bp ACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGAGGGCCCCTCAGTGGCCAGGGAGTTaGAGCGTAAGATCTCAGAGA +
Preference number: 4 (lower is better)
Translates to: TPGPWASAYSIRQGLRAPQWPGS*SVRSQR
Trigger: TCTCTGAGATCTTACGCTGCAACTCCCTGGCCACTG...AGGGGCCCTCAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR GCA 90 bp GTGAGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTGCGAGTGAAGCCGGCTaGAAGCTGCAGGGCTTTTCG +
Preference number: 4 (lower is better)
Translates to: VRGNTPGPWASAYSIRQGASEAG*KLQGFS
Trigger: CGAAAAGCCCTGCAGCTTGCAGCCGGCTTCACTCGC...ACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354891.7
CDS-3UTR CCA 90 bp ACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGAGGGCCCCTGGGATTTGCCTGTTCTaGCTCCATAGTCATCCACGG +
Preference number: 4 (lower is better)
Translates to: TPGPWASAYSIRQGLRAPGICLF*LHSHPR
Trigger: CCGTGGATGACTATGGAGCCAGAACAGGCAAATCCC...AGGGGCCCTCAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
ENST00000506135.5
CDS-3UTR CCA 90 bp ACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGAGGGCCCCTAACACACCTGGTCCCTaGGCCTCTGCATATAGCATC +
Preference number: 4 (lower is better)
Translates to: TPGPWASAYSIRQGLRAPNTPGP*ASAYSI
Trigger: GATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTT...AGGGGCCCTCAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
ENST00000506135.5
CDS-3UTR TCA 90 bp CCAGCCAGTGAGGAGTGGAAGGGGTTAATCCGAACAATCCAAGGGCCAATGTGGTCTGGATGCTCCCGCTaGAAGGCTTCAGGACACCCG +
Preference number: 4 (lower is better)
Translates to: PASEEWKGLIRTIQGPMWSGCSR*KASGHP
Trigger: CGGGTGTCCTGAAGCCTTTCAGCGGGAGCATCCAGA...CCACATTGGCCCTTGGATTGTTCGGATTAACCCCTTCCACTCCTCACTGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322350.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR TCA 90 bp AGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGTGCCCAGGTTATAGCTaGACACGAGGGCTCCATCCC +
Preference number: 4 (lower is better)
Translates to: RGNTPGPWASAYSIRQGLCPGYS*TRGLHP
Trigger: GGGATGGAGCCCTCGTGTTCAGCTATAACCTGGGCA...CAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
ENST00000506135.5
CDS-3UTR GCA 90 bp GTGAGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTTTCGCAGCCGGCGCCTaGAAAGTTTCACCAAGTCCC +
Preference number: 4 (lower is better)
Translates to: VRGNTPGPWASAYSIRQGFAAGA*KVSPSP
Trigger: GGGACTTGGTGAAACTTTGCAGGCGCCGGCTGCGAA...ACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS-3UTR GCA 90 bp TGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGACACCTTTGCCCAGGGTaGACTGGCATCGCGAGCCCC +
Preference number: 4 (lower is better)
Translates to: WTKSDASYTENSAGSARGHLCPG*TGIASP
Trigger: GGGGCTCGCGATGCCAGTGCACCCTGGGCAAAGGTG...TCCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
CDS-3UTR GCA 90 bp GTGAGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTAGCTCTCACCACCTTTaGCCAGGGTGCACTGGCATC +
Preference number: 4 (lower is better)
Translates to: VRGNTPGPWASAYSIRQGSSHHL*PGCTGI
Trigger: GATGCCAGTGCACCCTGGGCAAAGGTGGTGAGAGCT...ACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
CDS-3UTR GCA 90 bp GTGAGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTGGCCTGTCACTGGGGTaGCATTGTTCAGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: VRGNTPGPWASAYSIRQGGLSLG*HCSAAA
Trigger: TGCTGCAGCTGAACAATGGCACCCCAGTGACAGGCC...ACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR GCA 90 bp ACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGAGGGCCCCTATTCACCATGATGGATaGCACACCACTGCCCAGGTT +
Preference number: 4 (lower is better)
Translates to: TPGPWASAYSIRQGLRAPIHHDG*HTTAQV
Trigger: AACCTGGGCAGTGGTGTGGCATCCATCATGGTGAAT...AGGGGCCCTCAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
ENST00000506135.5
CDS-3UTR GCA 90 bp ACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGAGGGCCCCTTCATGCCTGGGGATTTaGCTGTTCTGGCTCCATAGT +
Preference number: 4 (lower is better)
Translates to: TPGPWASAYSIRQGLRAPSCLGI*LFWLHS
Trigger: ACTATGGAGCCAGAACAGGCAAATCCCCAGGCATGA...AGGGGCCCTCAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
ENST00000506135.5
CDS-3UTR CCA 90 bp TCTGGCAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGACGCCGGGTCCGAGGCTaGAAGCCAGGAGCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: SGSRYIFNGQSPMLPTQRRRVRG*KPGAGA
Trigger: GGCTCCTGCTCCTGGCTTCCAGCCTCGGACCCGGCG...TCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTGCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS-3UTR CCA 90 bp CCAGCCAGTGAGGAGTGGAAGGGGTTAATCCGAACAATCCAAGGGCCAATGTGGAGGCCCTACCTTGCCTaGTTTTCGGATGGCCGCTCG +
Preference number: 4 (lower is better)
Translates to: PASEEWKGLIRTIQGPMWRPYLA*FSDGRS
Trigger: CGAGCGGCCATCCGAAAACCAGGCAAGGTAGGGCCT...CCACATTGGCCCTTGGATTGTTCGGATTAACCCCTTCCACTCCTCACTGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS-3UTR CCA 90 bp ACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGAGGGCCCCTACCATGGAGTCCATCTaGATCCGCTCATGGATTGAG +
Preference number: 4 (lower is better)
Translates to: TPGPWASAYSIRQGLRAPTMESI*IRSWIE
Trigger: CTCAATCCATGAGCGGATCCAGATGGACTCCATGGT...AGGGGCCCTCAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS-3UTR CCA 90 bp AGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGTTCTCTGTATGGGAATaGGCTGGGGAGCCACCGTGG +
Preference number: 4 (lower is better)
Translates to: RGNTPGPWASAYSIRQGLFSVWE*AGEPPW
Trigger: CCACGGTGGCTCCCCAGCCCATTCCCATACAGAGAA...CAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
CDS-3UTR CCA 90 bp AGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGCGCCTCCTCAGGGCCTaGATGCATGTTCTCTCAAGC +
Preference number: 4 (lower is better)
Translates to: RGNTPGPWASAYSIRQGLRLLRA*MHVLSS
Trigger: GCTTGAGAGAACATGCATCCAGGCCCTGAGGAGGCG...CAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336740.10
CDS-3UTR TCA 90 bp GTGAGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTTGTAGGAGTCGGCTTTaGTTGCTGTGCAGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: VRGNTPGPWASAYSIRQGCRSRL*LLCRCH
Trigger: GTGGCACCTGCACAGCAATCAAAGCCGACTCCTACA...ACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR TCA 90 bp AGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGTGTAGGAGTCGGCTTTaGTTGCTGTGCAGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: RGNTPGPWASAYSIRQGLCRSRL*LLCRCH
Trigger: GTGGCACCTGCACAGCAATCAAAGCCGACTCCTACA...CAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR TCA 90 bp AACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGAGGGCCTGGGGACTCCGCCAATaGAAATGTCTGTGTTGCACT +
Preference number: 4 (lower is better)
Translates to: NTPGPWASAYSIRQGLRAWGLRQ*KCLCCT
Trigger: AGTGCAACACAGACATTTTCATTGGCGGAGTCCCCA...GGCCCTCAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR TCA 90 bp GGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGAGTCTGGATGCTCCCGCTaGAAGGCTTCAGGACACCCG +
Preference number: 4 (lower is better)
Translates to: GQSPMLPTQRILLGQLVESGCSR*KASGHP
Trigger: CGGGTGTCCTGAAGCCTTTCAGCGGGAGCATCCAGA...CTCCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR TCA 90 bp AGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGAGGAGCCATTCACCATaGTGGATGCCACACCACTGC +
Preference number: 4 (lower is better)
Translates to: RGNTPGPWASAYSIRQGLRSHSP*WMPHHC
Trigger: GCAGTGGTGTGGCATCCATCATGGTGAATGGCTCCT...CAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
ENST00000506135.5
CDS-3UTR TCA 90 bp TGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGAGCATCAGGCAGGGTCTaGGGGCCCCTGGGATTCTCA +
Preference number: 4 (lower is better)
Translates to: WTKSDASYTENSAGSARGASGRV*GPLGFS
Trigger: TGAGAATCCCAGGGGCCCTCAGACCCTGCCTGATGC...TCCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR GCA 90 bp CTGAATAGGGGCGCTTCCTTCACTCGCTCCAGGTTTCCAAGACAGGGCCACCTCGGCACGCTGTGCAACTaGTCCTGCAGGGATTTATCT +
Preference number: 4 (lower is better)
Translates to: LNRGASFTRSRFPRQGHLGTLCN*SCRDLS
Trigger: AGATAAATCCCTGCAGGAGCAGTTGCACAGCGTGCC...GAGGTGGCCCTGTCTTGGAAACCTGGAGCGAGTGAAGGAAGCGCCCCTATTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504709.1
CDS-3UTR GCA 90 bp AGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGGGAGTCGGCTTTGATTaGTGTGCAGGTGCCACCATG +
Preference number: 4 (lower is better)
Translates to: RGNTPGPWASAYSIRQGLGVGFD*CAGATM
Trigger: CATGGTGGCACCTGCACAGCAATCAAAGCCGACTCC...CAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR GCA 90 bp TTGGTGAGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGATACACGAAGCTCGTaGCAGTTGCCCAGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: LVRGNTPGPWASAYSIRQDTRSS*QLPRVR
Trigger: CCTCACCCTGGGCAACTGGCACGAGCTTCGTGTATC...CTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCTCACCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR GCA 90 bp AACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGAGGGCCATTCACCATGATGGATaGCACACCACTGCCCAGGTT +
Preference number: 4 (lower is better)
Translates to: NTPGPWASAYSIRQGLRAIHHDG*HTTAQV
Trigger: AACCTGGGCAGTGGTGTGGCATCCATCATGGTGAAT...GGCCCTCAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
ENST00000506135.5
CDS-3UTR GCA 90 bp GTGAGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTACGGCCTTAACTCGGTaGCACCGACCATCGTTGAAG +
Preference number: 4 (lower is better)
Translates to: VRGNTPGPWASAYSIRQGTALTR*HRPSLK
Trigger: CTTCAACGATGGTCGGTGGCACCGAGTTAAGGCCGT...ACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
ENST00000506135.5
CDS-3UTR GCA 90 bp AACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGAGGGCCCTACACAGAGAATTCTaGTGGGTCAGCTCGTGGAGT +
Preference number: 4 (lower is better)
Translates to: NTPGPWASAYSIRQGLRALHREF*WVSSWS
Trigger: ACTCCACGAGCTGACCCAGCAGAATTCTCTGTGTAG...GGCCCTCAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR GCA 90 bp AACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGAGGGCCCATCACAGATTCCACTaGTGCATTCCCCTGAGACTG +
Preference number: 4 (lower is better)
Translates to: NTPGPWASAYSIRQGLRAHHRFH*CIPLRL
Trigger: CAGTCTCAGGGGAATGCAGCAGTGGAATCTGTGATG...GGCCCTCAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397202.6
CDS-3UTR CCA 90 bp GGCTGTAAGCTGCTATGCTCACACGATATTCAGTGCCTGGTTTCAAATCTCCAACGCCGGGTCCGAGGCTaGAAGCCAGGAGCAGGAGCC +
Preference number: 4 (lower is better)
Translates to: GCKLLCSHDIQCLVSNLQRRVRG*KPGAGA
Trigger: GGCTCCTGCTCCTGGCTTCCAGCCTCGGACCCGGCG...TTGGAGATTTGAAACCAGGCACTGAATATCGTGTGAGCATAGCAGCTTACAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504709.1
CDS-3UTR CCA 90 bp ATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGTGCCTGGTTTTCGGATaGCCGCTCGGAGCGACACCG +
Preference number: 4 (lower is better)
Translates to: MDKVRCFLHREFCWVSSWCLVFG*PLGATP
Trigger: CGGTGTCGCTCCGAGCGGCCATCCGAAAACCAGGCA...CCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS-3UTR CCA 90 bp GACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGAGTGCCAGCTGCGGGGGCTaGGGCCATGGGAATTCATTG +
Preference number: 4 (lower is better)
Translates to: DKVRCFLHREFCWVSSWSASCGG*GHGNSL
Trigger: CAATGAATTCCCATGGCCCCAGCCCCCGCAGCTGGC...ACTCCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS-3UTR CCA 90 bp TGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGAGCTGGGGAGCCACCGTaGTCACAGGGAGAGATGCTG +
Preference number: 4 (lower is better)
Translates to: WTKSDASYTENSAGSARGAGEPP*SQGEML
Trigger: CAGCATCTCTCCCTGTGACCACGGTGGCTCCCCAGC...TCCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
CDS-3UTR CCA 90 bp AACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGAGGGCCTTCAGGATGATCTTCTaGATGCTCCCGCTGAAAGGC +
Preference number: 4 (lower is better)
Translates to: NTPGPWASAYSIRQGLRAFRMIF*MLPLKG
Trigger: GCCTTTCAGCGGGAGCATCCAGAAGATCATCCTGAA...GGCCCTCAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR CCA 90 bp CCAGCCAGTGAGGAGTGGAAGGGGTTAATCCGAACAATCCAAGGGCCAATGTGGGCTCTCACACAGGGGTaGGCCGCATTCTCCACATTC +
Preference number: 4 (lower is better)
Translates to: PASEEWKGLIRTIQGPMWALTQG*AAFSTF
Trigger: GAATGTGGAGAATGCGGCCCACCCCTGTGTGAGAGC...CCACATTGGCCCTTGGATTGTTCGGATTAACCCCTTCCACTCCTCACTGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322350.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR CCA 90 bp CCAGCCAGTGAGGAGTGGAAGGGGTTAATCCGAACAATCCAAGGGCCAATGTGGCTGCCGCATCATGCCTaGGGATTTGCCTGTTCTGGC +
Preference number: 4 (lower is better)
Translates to: PASEEWKGLIRTIQGPMWLPHHA*GFACSG
Trigger: GCCAGAACAGGCAAATCCCCAGGCATGATGCGGCAG...CCACATTGGCCCTTGGATTGTTCGGATTAACCCCTTCCACTCCTCACTGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR CCA 90 bp TTGGTGAGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGCTGCCGCATCATGCCTaGGGATTTGCCTGTTCTGGC +
Preference number: 4 (lower is better)
Translates to: LVRGNTPGPWASAYSIRQLPHHA*GFACSG
Trigger: GCCAGAACAGGCAAATCCCCAGGCATGATGCGGCAG...CTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCTCACCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
ENST00000506135.5
CDS-3UTR CCA 90 bp AACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGAGGGCCTTGGACAAGGCCAGCTaGTGTTACTTGGCTCCACAA +
Preference number: 4 (lower is better)
Translates to: NTPGPWASAYSIRQGLRALDKAS*CYLAPQ
Trigger: TTGTGGAGCCAAGTAACACCAGCTGGCCTTGTCCAA...GGCCCTCAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
ENST00000506135.5
CDS-3UTR CCA 90 bp GTGAGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTGAAGGCTCTGTCCCTTaGACAAGGCCAGCTGGTGTT +
Preference number: 4 (lower is better)
Translates to: VRGNTPGPWASAYSIRQGEGSVP*TRPAGV
Trigger: AACACCAGCTGGCCTTGTCCAAGGGACAGAGCCTTC...ACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
ENST00000506135.5
CDS-3UTR TCA 90 bp TTGGTGAGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGTCAATGCGCCCAGCTTaGTGTCAAGAGGAGGCCCTA +
Preference number: 4 (lower is better)
Translates to: LVRGNTPGPWASAYSIRQSMRPA*CQEEAL
Trigger: TAGGGCCTCCTCTTGACATCAAGCTGGGCGCATTGA...CTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCTCACCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS-3UTR TCA 90 bp ACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGAGGGCCCCTTTTTCCACTGGATGCTaGAAGCCGTACAGTTCAATG +
Preference number: 4 (lower is better)
Translates to: TPGPWASAYSIRQGLRAPFSTGC*KPYSSM
Trigger: CATTGAACTGTACGGCTTTCAGCATCCAGTGGAAAA...AGGGGCCCTCAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS-3UTR TCA 90 bp AAAGACAGTGTACCCAAGGATGGGACTTCCAGGATGCCTTGGCATTTTCCACTGTCGGGATGTCCCGGCTaGGAGGCACGCTGTGCAACT +
Preference number: 4 (lower is better)
Translates to: KDSVPKDGTSRMPWHFPLSGCPG*EARCAT
Trigger: AGTTGCACAGCGTGCCTCTCAGCCGGGACATCCCGA...CAGTGGAAAATGCCAAGGCATCCTGGAAGTCCCATCCTTGGGTACACTGTCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504709.1
CDS-3UTR TCA 90 bp GTGAGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTAATCCGAAACCACAATaGCATGTGGCTGCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: VRGNTPGPWASAYSIRQGNPKPQ*HVAAGE
Trigger: CTCCCCAGCAGCCACATGTCATTGTGGTTTCGGATT...ACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS-3UTR TCA 90 bp TTGGTGAGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGCAGCTCCCATGTCGGTaGTATAACGGGGTCCATAGC +
Preference number: 4 (lower is better)
Translates to: LVRGNTPGPWASAYSIRQQLPCR*YNGVHS
Trigger: GCTATGGACCCCGTTATATCACCGACATGGGAGCTG...CTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCTCACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
CDS-3UTR TCA 90 bp TTGGTGAGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGACTGCACACAGCCTTaGAAGCCTCGGTTTGTCCCT +
Preference number: 4 (lower is better)
Translates to: LVRGNTPGPWASAYSIRQDCTQP*KPRFVP
Trigger: AGGGACAAACCGAGGCTTTCAAGGCTGTGTGCAGTC...CTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCTCACCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
CDS-3UTR TCA 90 bp CCAGCCAGTGAGGAGTGGAAGGGGTTAATCCGAACAATCCAAGGGCCAATGTGGATCGCTTTCTGGCAGTaGAGCCCCTCAAAGCCCAAG +
Preference number: 4 (lower is better)
Translates to: PASEEWKGLIRTIQGPMWIAFWQ*SPSKPK
Trigger: CTTGGGCTTTGAGGGGCTTCACTGCCAGAAAGCGAT...CCACATTGGCCCTTGGATTGTTCGGATTAACCCCTTCCACTCCTCACTGGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000397202.6
CDS-3UTR TCA 90 bp TTGGTGAGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGAGGAGCCATTCACCATaGTGGATGCCACACCACTGC +
Preference number: 4 (lower is better)
Translates to: LVRGNTPGPWASAYSIRQRSHSP*WMPHHC
Trigger: GCAGTGGTGTGGCATCCATCATGGTGAATGGCTCCT...CTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCTCACCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
ENST00000506135.5
CDS-3UTR TCA 90 bp GTGAGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTAATCGGTGGACAGGGTaGAGTGAGAGATACAGCCCA +
Preference number: 4 (lower is better)
Translates to: VRGNTPGPWASAYSIRQGNRWTG*SERYSP
Trigger: TGGGCTGTATCTCTCACTTCACCCTGTCCACCGATT...ACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
ENST00000506135.5
CDS-3UTR TCA 90 bp GTGAGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCACACAAAAGGCCCTTaGGGACAGCTCCTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: VRGNTPGPWASAYSIRQGHTKGP*GQLLPL
Trigger: AAGAGGAAGGAGCTGTCCTCAAGGGCCTTTTGTGTG...ACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336740.10
ENST00000397202.6
CDS-3UTR TCA 90 bp AACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGAGGGCCTGGTTGCAGATCACTTaGAGCCAGCCTTGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: NTPGPWASAYSIRQGLRAWLQIT*SQPCFS
Trigger: AGAGAAACAAGGCTGGCTTCAAGTGATCTGCAACCA...GGCCCTCAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397210.7
ENST00000506135.5
CDS-3UTR TCA 90 bp ACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGAGGGCCCCTGAGGAAGGTGCCTGTTaGAGCTTATTACCTCTTCAA +
Preference number: 4 (lower is better)
Translates to: TPGPWASAYSIRQGLRAPEEGAC*SLLPLQ
Trigger: TTGAAGAGGTAATAAGCTTCAACAGGCACCTTCCTC...AGGGGCCCTCAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506135.5
CDS-3UTR GCA 90 bp TCACTCGCTCCAGGTTTCCAAGACAGGGCCACCTCAGAATCCGAAACCACAATGTTCGCAGCCGGCGCCTaGAAAGTTTCACCAAGTCCC +
Preference number: 4 (lower is better)
Translates to: SLAPGFQDRATSESETTMFAAGA*KVSPSP
Trigger: GGGACTTGGTGAAACTTTGCAGGCGCCGGCTGCGAA...CATTGTGGTTTCGGATTCTGAGGTGGCCCTGTCTTGGAAACCTGGAGCGAGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504709.1
CDS-3UTR GCA 90 bp AGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGCTGTGCAACTGCTCCTaGAGGGATTTATCTGCGCCA +
Preference number: 4 (lower is better)
Translates to: RGNTPGPWASAYSIRQGLLCNCS*RDLSAP
Trigger: TGGCGCAGATAAATCCCTGCAGGAGCAGTTGCACAG...CAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS-3UTR GCA 90 bp AACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGAGGGCCAGCCTGGCTGTAAGCTaGTATGCTCACACGATATTC +
Preference number: 4 (lower is better)
Translates to: NTPGPWASAYSIRQGLRASLAVS*YAHTIF
Trigger: GAATATCGTGTGAGCATAGCAGCTTACAGCCAGGCT...GGCCCTCAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS-3UTR GCA 90 bp TGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGAAGCTCAGCCGCCCTTTaGCAGCCTGGCTGTAAGCTG +
Preference number: 4 (lower is better)
Translates to: WTKSDASYTENSAGSARGSSAAL*QPGCKL
Trigger: CAGCTTACAGCCAGGCTGGCAAAGGGCGGCTGAGCT...TCCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS-3UTR GCA 90 bp TTCCAAGACAGGGCCACCTCAGAATCCGAAACCACAATGACATGTGGCTGCTGGACAATGACATGTGGCTaGTGGGGAGCTGCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: FQDRATSESETTMTCGCWTMTCG*WGAAGG
Trigger: GCCTCCTGCAGCTCCCCAGCAGCCACATGTCATTGT...CCAGCAGCCACATGTCATTGTGGTTTCGGATTCTGAGGTGGCCCTGTCTTGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504709.1
CDS-3UTR GCA 90 bp AACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGAGGGCCTGGACAGGAAGTCTTTaGTGCCTGTGTCATAGCTGT +
Preference number: 4 (lower is better)
Translates to: NTPGPWASAYSIRQGLRAWTGSL*CLCHSC
Trigger: ACAGCTATGACACAGGCAGCAAAGACTTCCTGTCCA...GGCCCTCAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR GCA 90 bp GTGAGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGCGGCCGATAAACTaGGGGATCTCAATGGCTTCT +
Preference number: 4 (lower is better)
Translates to: VRGNTPGPWASAYSIRQGLRPIN*GISMAS
Trigger: AGAAGCCATTGAGATCCCGCAGTTTATCGGCCGCAG...ACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
ENST00000506135.5
CDS-3UTR GCA 90 bp AGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGCTGCGGCCGATAAACTaGGGGATCTCAATGGCTTCT +
Preference number: 4 (lower is better)
Translates to: RGNTPGPWASAYSIRQGLLRPIN*GISMAS
Trigger: AGAAGCCATTGAGATCCCGCAGTTTATCGGCCGCAG...CAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
ENST00000506135.5
CDS-3UTR GCA 90 bp TTGGTGAGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGACGGCCTTAACTCGGTaGCACCGACCATCGTTGAAG +
Preference number: 4 (lower is better)
Translates to: LVRGNTPGPWASAYSIRQTALTR*HRPSLK
Trigger: CTTCAACGATGGTCGGTGGCACCGAGTTAAGGCCGT...CTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCTCACCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
ENST00000506135.5
CDS-3UTR GCA 90 bp CCAGCCAGTGAGGAGTGGAAGGGGTTAATCCGAACAATCCAAGGGCCAATGTGGACGGCCTTAACTCGGTaGCACCGACCATCGTTGAAG +
Preference number: 4 (lower is better)
Translates to: PASEEWKGLIRTIQGPMWTALTR*HRPSLK
Trigger: CTTCAACGATGGTCGGTGGCACCGAGTTAAGGCCGT...CCACATTGGCCCTTGGATTGTTCGGATTAACCCCTTCCACTCCTCACTGGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR GCA 90 bp ACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGAGGGCCCCTAGCCCTCTCATATATTaGCTGTTAGTGTGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: TPGPWASAYSIRQGLRAPSPLIY*LLVCRA
Trigger: TGCTCTGCACACTAACAGGCAATATATGAGAGGGCT...AGGGGCCCTCAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
ENST00000506135.5
CDS-3UTR GCA 90 bp AGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGAAGGCCACCCAGGGATaGCTGTCTTGGTTCTCAGTT +
Preference number: 4 (lower is better)
Translates to: RGNTPGPWASAYSIRQGLKATQG*LSWFSV
Trigger: AACTGAGAACCAAGACAGGCATCCCTGGGTGGCCTT...CAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR GCA 90 bp TTGGTGAGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGCCACACTCTGCCCGGTaGCAGCATGAAAGAGAACAG +
Preference number: 4 (lower is better)
Translates to: LVRGNTPGPWASAYSIRQPHSAR*QHEREQ
Trigger: CTGTTCTCTTTCATGCTGGCACCGGGCAGAGTGTGG...CTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCTCACCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397210.7
ENST00000506135.5
CDS-3UTR CCA 90 bp TGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGAAGGCCCTACCTTGCCTaGTTTTCGGATGGCCGCTCG +
Preference number: 4 (lower is better)
Translates to: WTKSDASYTENSAGSARGRPYLA*FSDGRS
Trigger: CGAGCGGCCATCCGAAAACCAGGCAAGGTAGGGCCT...TCCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS-3UTR CCA 90 bp CGGGATGTCCCGGCTGAGAGGCACGCTGTGCAACTGCTCCTGCAGGGATTTATCACTTCCAGGATGCCTTaGCATTTTCCACTGGATGCT +
Preference number: 4 (lower is better)
Translates to: RDVPAERHAVQLLLQGFITSRMP*HFPLDA
Trigger: AGCATCCAGTGGAAAATGCCAAGGCATCCTGGAAGT...GATAAATCCCTGCAGGAGCAGTTGCACAGCGTGCCTCTCAGCCGGGACATCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504709.1
CDS-3UTR CCA 90 bp AGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGGGCAGGCAGGAATCTTaGGACAAAGTGGTGACATGC +
Preference number: 4 (lower is better)
Translates to: RGNTPGPWASAYSIRQGLGRQES*DKVVTC
Trigger: GCATGTCACCACTTTGTCCCAAGATTCCTGCCTGCC...CAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS-3UTR CCA 90 bp AATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGCTGGGGAGCCACCGTaGTCACAGGGAGAGATGCTG +
Preference number: 4 (lower is better)
Translates to: NGQSPMLPTQRILLGQLVAGEPP*SQGEML
Trigger: CAGCATCTCTCCCTGTGACCACGGTGGCTCCCCAGC...CACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
CDS-3UTR CCA 90 bp GGCCACCCAGGGATGCCTGTCTTGGTTCTCAGTTTCTCATCAGTGTGTACTTTCATGCTGGGGCTCCAGTaGCCAGGGAGTTGCAGCGTA +
Preference number: 4 (lower is better)
Translates to: GHPGMPVLVLSFSSVCTFMLGLQ*PGSCSV
Trigger: TACGCTGCAACTCCCTGGCCACTGGAGCCCCAGCAT...GAAAGTACACACTGATGAGAAACTGAGAACCAAGACAGGCATCCCTGGGTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR CCA 90 bp GGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGAGAAGCGGAACTCCACGTaGCCCCCTGCCAAGTTGATG +
Preference number: 4 (lower is better)
Translates to: GQSPMLPTQRILLGQLVEKRNST*PPAKLM
Trigger: CATCAACTTGGCAGGGGGCCACGTGGAGTTCCGCTT...CTCCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR CCA 90 bp GATCTCTGGCAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACACATAGCCCTCCTTCCTaGGCCGGCAGCTGCCCCCAT +
Preference number: 4 (lower is better)
Translates to: DLWQPLHIQWTKSDASYTHSPPS*AGSCPH
Trigger: ATGGGGGCAGCTGCCGGCCCAGGAAGGAGGGCTATG...TGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTGCCAGAGATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR CCA 90 bp AACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGAGGGCCGTTATCTTTCCTGACTaGCCATCCCTAACGGCCTTA +
Preference number: 4 (lower is better)
Translates to: NTPGPWASAYSIRQGLRAVIFPD*PSLTAL
Trigger: TAAGGCCGTTAGGGATGGCCAGTCAGGAAAGATAAC...GGCCCTCAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
ENST00000506135.5
CDS-3UTR CCA 90 bp GTGAGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTGGGATTTGCCTGTTCTaGCTCCATAGTCATCCACGG +
Preference number: 4 (lower is better)
Translates to: VRGNTPGPWASAYSIRQGGICLF*LHSHPR
Trigger: CCGTGGATGACTATGGAGCCAGAACAGGCAAATCCC...ACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
ENST00000506135.5
CDS-3UTR CCA 90 bp TTGGTGAGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGAAGGCTCTGTCCCTTaGACAAGGCCAGCTGGTGTT +
Preference number: 4 (lower is better)
Translates to: LVRGNTPGPWASAYSIRQEGSVP*TRPAGV
Trigger: AACACCAGCTGGCCTTGTCCAAGGGACAGAGCCTTC...CTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCTCACCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
ENST00000506135.5
CDS-3UTR CCA 90 bp AGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGAACACACCTGGTCCCTaGGCCTCTGCATATAGCATC +
Preference number: 4 (lower is better)
Translates to: RGNTPGPWASAYSIRQGLNTPGP*ASAYSI
Trigger: GATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTT...CAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
ENST00000506135.5
CDS-3UTR CCA 90 bp GTGAGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTAACACACCTGGTCCCTaGGCCTCTGCATATAGCATC +
Preference number: 4 (lower is better)
Translates to: VRGNTPGPWASAYSIRQGNTPGP*ASAYSI
Trigger: GATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTT...ACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
ENST00000506135.5
CDS-3UTR CCA 90 bp GGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGAGTGCTGGGTCAGCTCGTaGAGTGTCAGCAGGAAAGGC +
Preference number: 4 (lower is better)
Translates to: GQSPMLPTQRILLGQLVECWVSS*SVSRKG
Trigger: GCCTTTCCTGCTGACACTCCACGAGCTGACCCAGCA...CTCCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR TCA 90 bp TCTCTGGCAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGATCGGGATGTCCCGGCTaGGAGGCACGCTGTGCAACT +
Preference number: 4 (lower is better)
Translates to: SLAAATYSMDKVRCFLHRSGCPG*EARCAT
Trigger: AGTTGCACAGCGTGCCTCTCAGCCGGGACATCCCGA...TCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTGCCAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS-3UTR TCA 90 bp GGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGAGCTTGGGACAAAGTGGTaGCATGCCGAGGAGAGCTCA +
Preference number: 4 (lower is better)
Translates to: GQSPMLPTQRILLGQLVELGTKW*HAEESS
Trigger: TGAGCTCTCCTCGGCATGTCACCACTTTGTCCCAAG...CTCCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS-3UTR TCA 90 bp TTGGTGAGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGCCCAGGTGTAGTCATTaGCACAGAAGCTGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: LVRGNTPGPWASAYSIRQPRCSH*HRSCQQ
Trigger: CTGCTGACAGCTTCTGTGTCAATGACTACACCTGGG...CTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCTCACCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
CDS-3UTR TCA 90 bp CCAGCCAGTGAGGAGTGGAAGGGGTTAATCCGAACAATCCAAGGGCCAATGTGGTGGTCTCACTTACGATaGTGGCAACCCCAGTTCCAC +
Preference number: 4 (lower is better)
Translates to: PASEEWKGLIRTIQGPMWWSHLR*WQPQFH
Trigger: GTGGAACTGGGGTTGCCATCATCGTAAGTGAGACCA...CCACATTGGCCCTTGGATTGTTCGGATTAACCCCTTCCACTCCTCACTGGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322350.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR TCA 90 bp GGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGAGGACTGCACACAGCCTTaGAAGCCTCGGTTTGTCCCT +
Preference number: 4 (lower is better)
Translates to: GQSPMLPTQRILLGQLVEDCTQP*KPRFVP
Trigger: AGGGACAAACCGAGGCTTTCAAGGCTGTGTGCAGTC...CTCCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
CDS-3UTR TCA 90 bp AACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGAGGGCCAGAGACTCTCTGAACTaGGGAATGGTCAAGGTGAAA +
Preference number: 4 (lower is better)
Translates to: NTPGPWASAYSIRQGLRARDSLN*GMVKVK
Trigger: TTTCACCTTGACCATTCCTCAGTTCAGAGAGTCTCT...GGCCCTCAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR TCA 90 bp ATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGTGCCCAGGTTATAGCTaGACACGAGGGCTCCATCCC +
Preference number: 4 (lower is better)
Translates to: MDKVRCFLHREFCWVSSWCPGYS*TRGLHP
Trigger: GGGATGGAGCCCTCGTGTTCAGCTATAACCTGGGCA...CCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR TCA 90 bp GACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGAGTTGCCCAGGTTATAGCTaGACACGAGGGCTCCATCCC +
Preference number: 4 (lower is better)
Translates to: DKVRCFLHREFCWVSSWSCPGYS*TRGLHP
Trigger: GGGATGGAGCCCTCGTGTTCAGCTATAACCTGGGCA...ACTCCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR TCA 90 bp GGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGAGAGGAGCCATTCACCATaGTGGATGCCACACCACTGC +
Preference number: 4 (lower is better)
Translates to: GQSPMLPTQRILLGQLVERSHSP*WMPHHC
Trigger: GCAGTGGTGTGGCATCCATCATGGTGAATGGCTCCT...CTCCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR TCA 90 bp TTGGTGAGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGAATCGGTGGACAGGGTaGAGTGAGAGATACAGCCCA +
Preference number: 4 (lower is better)
Translates to: LVRGNTPGPWASAYSIRQNRWTG*SERYSP
Trigger: TGGGCTGTATCTCTCACTTCACCCTGTCCACCGATT...CTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCTCACCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
ENST00000506135.5
CDS-3UTR TCA 90 bp GTGAGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTTGGCTCCACAAGTGTTaGTGTTTTTCCCATCCACGG +
Preference number: 4 (lower is better)
Translates to: VRGNTPGPWASAYSIRQGWLHKC*CFSHPR
Trigger: CCGTGGATGGGAAAAACATCAACACTTGTGGAGCCA...ACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
ENST00000506135.5
CDS-3UTR GCA 90 bp TGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGAACAATGACATGTGGCTaGTGGGGAGCTGCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: WTKSDASYTENSAGSARGTMTCG*WGAAGG
Trigger: GCCTCCTGCAGCTCCCCAGCAGCCACATGTCATTGT...TCCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS-3UTR GCA 90 bp TGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGAGTGCCATTGTTCAGCTaGAGCAGCCCGTTCAGCCCA +
Preference number: 4 (lower is better)
Translates to: WTKSDASYTENSAGSARGVPLFS*SSPFSP
Trigger: TGGGCTGAACGGGCTGCTGCAGCTGAACAATGGCAC...TCCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR GCA 90 bp AGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGCATCACAGATTCCACTaGTGCATTCCCCCACATCAG +
Preference number: 4 (lower is better)
Translates to: RGNTPGPWASAYSIRQGLHHRFH*CIPPHQ
Trigger: CTGATGTGGGGGAATGCAGCAGTGGAATCTGTGATG...CAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
CDS-3UTR GCA 90 bp AACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGAGGGCCACAGGAAGTCTTTGCTaGCTGTGTCATAGCTGTACA +
Preference number: 4 (lower is better)
Translates to: NTPGPWASAYSIRQGLRATGSLC*LCHSCT
Trigger: TGTACAGCTATGACACAGGCAGCAAAGACTTCCTGT...GGCCCTCAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR GCA 90 bp ATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGGATACACGAAGCTCGTaGCAGTTGCCCAGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: MDKVRCFLHREFCWVSSWDTRSS*QLPRVR
Trigger: CCTCACCCTGGGCAACTGGCACGAGCTTCGTGTATC...CCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR GCA 90 bp GGCCACCCAGGGATGCCTGTCTTGGTTCTCAGTTTCTCATCAGTGTGTACTTTCGATACACGAAGCTCGTaGCAGTTGCCCAGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: GHPGMPVLVLSFSSVCTFDTRSS*QLPRVR
Trigger: CCTCACCCTGGGCAACTGGCACGAGCTTCGTGTATC...GAAAGTACACACTGATGAGAAACTGAGAACCAAGACAGGCATCCCTGGGTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR GCA 90 bp ACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGAGGGCCCCTCCCTCCACTATCTTCTaGTTATCCACCTGTAAGATT +
Preference number: 4 (lower is better)
Translates to: TPGPWASAYSIRQGLRAPPSTIF*LSTCKI
Trigger: AATCTTACAGGTGGATAAGCAGAAGATAGTGGAGGG...AGGGGCCCTCAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR GCA 90 bp AGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGCCATTGATGTTAAGCTaGCGCATCATGCCTGGGGAT +
Preference number: 4 (lower is better)
Translates to: RGNTPGPWASAYSIRQGLPLMLS*RIMPGD
Trigger: ATCCCCAGGCATGATGCGGCAGCTTAACATCAATGG...CAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
ENST00000506135.5
CDS-3UTR GCA 90 bp TTGGTGAGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGAAGGCCACCCAGGGATaGCTGTCTTGGTTCTCAGTT +
Preference number: 4 (lower is better)
Translates to: LVRGNTPGPWASAYSIRQKATQG*LSWFSV
Trigger: AACTGAGAACCAAGACAGGCATCCCTGGGTGGCCTT...CTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCTCACCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR GCA 90 bp GTGAGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTACACAGAGAATTCTaGTGGGTCAGCTCGTGGAGT +
Preference number: 4 (lower is better)
Translates to: VRGNTPGPWASAYSIRQGLHREF*WVSSWS
Trigger: ACTCCACGAGCTGACCCAGCAGAATTCTCTGTGTAG...ACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR GCA 90 bp AACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGAGGGCCTGCAGCGTATCTGTGTaGCAGATGTCTTCACACAAA +
Preference number: 4 (lower is better)
Translates to: NTPGPWASAYSIRQGLRACSVSV*QMSSHK
Trigger: TTTGTGTGAAGACATCTGGCACACAGATACGCTGCA...GGCCCTCAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336740.10
ENST00000397202.6
CDS-3UTR GCA 90 bp GCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCAAGCCGGCTGCAAGCTaGAGGGCTTTTCGCGGGGGC +
Preference number: 4 (lower is better)
Translates to: AATYSMDKVRCFLHREFCKPAAS*RAFRGG
Trigger: GCCCCCGCGAAAAGCCCTGCAGCTTGCAGCCGGCTT...GCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000354891.7
CDS-3UTR GCA 90 bp GGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGAGCACAGATTCCACTGCTaGATTCCCCTGAGACTGGCC +
Preference number: 4 (lower is better)
Translates to: GQSPMLPTQRILLGQLVEHRFHC*IPLRLA
Trigger: GGCCAGTCTCAGGGGAATGCAGCAGTGGAATCTGTG...CTCCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397202.6
CDS-3UTR CCA 90 bp TCTCTGGCAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGACGGGGGCTGGGGCCATaGGAATTCATTGCCCTCACG +
Preference number: 4 (lower is better)
Translates to: SLAAATYSMDKVRCFLHRRGLGP*EFIALT
Trigger: CGTGAGGGCAATGAATTCCCATGGCCCCAGCCCCCG...TCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTGCCAGAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS-3UTR CCA 90 bp GGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGAGAGACTGGCCTGTCACTaGGGTGCCATTGTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: GQSPMLPTQRILLGQLVERLACH*GAIVQL
Trigger: CAGCTGAACAATGGCACCCCAGTGACAGGCCAGTCT...CTCCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR CCA 90 bp GGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGAGCCAACCAGTAAGCGCTaGGAGCGCCACCAAGATAGA +
Preference number: 4 (lower is better)
Translates to: GQSPMLPTQRILLGQLVEPTSKR*ERHQDR
Trigger: TCTATCTTGGTGGCGCTCCCAGCGCTTACTGGTTGG...CTCCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
CDS-3UTR CCA 90 bp AATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGATGCTGGGGCTCCAGTaGCCAGGGAGTTGCAGCGTA +
Preference number: 4 (lower is better)
Translates to: NGQSPMLPTQRILLGQLVMLGLQ*PGSCSV
Trigger: TACGCTGCAACTCCCTGGCCACTGGAGCCCCAGCAT...CACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR CCA 90 bp ATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGAAGCGGAACTCCACGTaGCCCCCTGCCAAGTTGATG +
Preference number: 4 (lower is better)
Translates to: MDKVRCFLHREFCWVSSWKRNST*PPAKLM
Trigger: CATCAACTTGGCAGGGGGCCACGTGGAGTTCCGCTT...CCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR CCA 90 bp TGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGAAAGCGGAACTCCACGTaGCCCCCTGCCAAGTTGATG +
Preference number: 4 (lower is better)
Translates to: WTKSDASYTENSAGSARGKRNST*PPAKLM
Trigger: CATCAACTTGGCAGGGGGCCACGTGGAGTTCCGCTT...TCCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR CCA 90 bp AATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGCGCTGTTGGGTCTCATaGGGCTGTCTCCCCTCCACA +
Preference number: 4 (lower is better)
Translates to: NGQSPMLPTQRILLGQLVRCWVS*GCLPST
Trigger: TGTGGAGGGGAGACAGCCCCATGAGACCCAACAGCG...CACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR CCA 90 bp GTGAGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTTTGGACAAGGCCAGCTaGTGTTACTTGGCTCCACAA +
Preference number: 4 (lower is better)
Translates to: VRGNTPGPWASAYSIRQGLDKAS*CYLAPQ
Trigger: TTGTGGAGCCAAGTAACACCAGCTGGCCTTGTCCAA...ACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCTCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
ENST00000506135.5
CDS-3UTR CCA 90 bp AGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGTTGGACAAGGCCAGCTaGTGTTACTTGGCTCCACAA +
Preference number: 4 (lower is better)
Translates to: RGNTPGPWASAYSIRQGLLDKAS*CYLAPQ
Trigger: TTGTGGAGCCAAGTAACACCAGCTGGCCTTGTCCAA...CAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
ENST00000506135.5
CDS-3UTR CCA 90 bp AACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGAGGGCCTTTACCAAAAGAGAATaGTCAGCTCCCCAAGTTGCC +
Preference number: 4 (lower is better)
Translates to: NTPGPWASAYSIRQGLRAFTKRE*SAPQVA
Trigger: GGCAACTTGGGGAGCTGACCATTCTCTTTTGGTAAA...GGCCCTCAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322350.10
3UTR CAA 72 bp TGGATGCTGAAAGCCGTACAGTTCAATGCGCCCAGCTaGATGTCAAGAGGAGGCCCTACCTTGCCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: WMLKAVQFNAPS*MSRGGPTLPVP
Trigger: TGGAACAGGCAAGGTAGGGCCTCCTCTTGACATCAAGCTGGGCGCATTGAACTGTACGGCTTTCAGCATCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504709.1
CDS-3UTR TCA 90 bp GACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGAGTTCAATGCGCCCAGCTTaGTGTCAAGAGGAGGCCCTA +
Preference number: 4 (lower is better)
Translates to: DKVRCFLHREFCWVSSWSSMRPA*CQEEAL
Trigger: TAGGGCCTCCTCTTGACATCAAGCTGGGCGCATTGA...ACTCCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS-3UTR TCA 90 bp GCCAACCTCAGAGTAAAAGACAGTGTACCCAAGGATGGGACTTCCAGGATGCCTCTTGGGACAAAGTGGTaGCATGCCGAGGAGAGCTCA +
Preference number: 4 (lower is better)
Translates to: ANLRVKDSVPKDGTSRMPLGTKW*HAEESS
Trigger: TGAGCTCTCCTCGGCATGTCACCACTTTGTCCCAAG...AGGCATCCTGGAAGTCCCATCCTTGGGTACACTGTCTTTTACTCTGAGGTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504709.1
CDS-3UTR TCA 90 bp GTACAGTTCAATGCGCCCAGCTTGATGTCAAGAGGAGGCCCTACCTTGCCTGTTAATCCGAAACCACAATaGCATGTGGCTGCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: VQFNAPSLMSRGGPTLPVNPKPQ*HVAAGE
Trigger: CTCCCCAGCAGCCACATGTCATTGTGGTTTCGGATT...AACAGGCAAGGTAGGGCCTCCTCTTGACATCAAGCTGGGCGCATTGAACTGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504709.1
CDS-3UTR TCA 90 bp TTGGTGAGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGATCCGCTCATGGATTaGGGTCCACTTCTTGTCGAA +
Preference number: 4 (lower is better)
Translates to: LVRGNTPGPWASAYSIRQDPLMD*GPLLVE
Trigger: TTCGACAAGAAGTGGACCTCAATCCATGAGCGGATC...CTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCTCACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS-3UTR TCA 90 bp TTCAGAGTCATCCACCCAAACTTCCAAAAGTATACTGTGTGGACAATCTGCAGCGGCAGAGGGTCCGGATaGTGTCACTGGGCCAGCTGC +
Preference number: 4 (lower is better)
Translates to: FRVIHPNFQKYTVWTICSGRGSG*CHWASC
Trigger: GCAGCTGGCCCAGTGACATCATCCGGACCCTCTGCC...GCTGCAGATTGTCCACACAGTATACTTTTGGAAGTTTGGGTGGATGACTCTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322350.10
CDS-3UTR TCA 90 bp ATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGCAGCTCCCATGTCGGTaGTATAACGGGGTCCATAGC +
Preference number: 4 (lower is better)
Translates to: MDKVRCFLHREFCWVSSWQLPCR*YNGVHS
Trigger: GCTATGGACCCCGTTATATCACCGACATGGGAGCTG...CCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
CDS-3UTR TCA 90 bp GGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGAGTGGTCTCACTTACGATaGTGGCAACCCCAGTTCCAC +
Preference number: 4 (lower is better)
Translates to: GQSPMLPTQRILLGQLVEWSHLR*WQPQFH
Trigger: GTGGAACTGGGGTTGCCATCATCGTAAGTGAGACCA...CTCCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR TCA 90 bp GTGAGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTATCTCAGAGACTCTCTaGACTGAGGAATGGTCAAGG +
Preference number: 4 (lower is better)
Translates to: VRGNTPGPWASAYSIRQGISETL*TEEWSR
Trigger: CCTTGACCATTCCTCAGTTCAGAGAGTCTCTGAGAT...ACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR TCA 90 bp GGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGAGGAGGACACCATCTCCTaGGTCTGGCCGAAATGTGAT +
Preference number: 4 (lower is better)
Translates to: GQSPMLPTQRILLGQLVEEDTIS*VWPKCD
Trigger: ATCACATTTCGGCCAGACTCAGGAGATGGTGTCCTC...CTCCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR TCA 90 bp TGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGACACGGTTATCTTTCCTaGCTGGCCATCCCTAACGGC +
Preference number: 4 (lower is better)
Translates to: WTKSDASYTENSAGSARGHGYLS*LAIPNG
Trigger: GCCGTTAGGGATGGCCAGTCAGGAAAGATAACCGTG...TCCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR TCA 90 bp ATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGCACGGTTATCTTTCCTaGCTGGCCATCCCTAACGGC +
Preference number: 4 (lower is better)
Translates to: MDKVRCFLHREFCWVSSWHGYLS*LAIPNG
Trigger: GCCGTTAGGGATGGCCAGTCAGGAAAGATAACCGTG...CCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR TCA 90 bp CAGGCTCTGGAATTTGCATTGATGTGTGATCTCTGGCAGCCGCTACATATTCAAGCATCAGGCAGGGTCTaGGGGCCCCTGGGATTCTCA +
Preference number: 4 (lower is better)
Translates to: QALEFALMCDLWQPLHIQASGRV*GPLGFS
Trigger: TGAGAATCCCAGGGGCCCTCAGACCCTGCCTGATGC...TTGAATATGTAGCGGCTGCCAGAGATCACACATCAATGCAAATTCCAGAGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR TCA 90 bp AGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGGTACTTTCTTCTTGGTaGGAGGAAACACACCTGGTC +
Preference number: 4 (lower is better)
Translates to: RGNTPGPWASAYSIRQGLVLSSW*EETHLV
Trigger: GACCAGGTGTGTTTCCTCTCACCAAGAAGAAAGTAC...CAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
ENST00000506135.5
CDS-3UTR TCA 90 bp GTGAGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTGTACTTTCTTCTTGGTaGGAGGAAACACACCTGGTC +
Preference number: 4 (lower is better)
Translates to: VRGNTPGPWASAYSIRQGVLSSW*EETHLV
Trigger: GACCAGGTGTGTTTCCTCTCACCAAGAAGAAAGTAC...ACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
ENST00000506135.5
CDS-3UTR TCA 90 bp AATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGATGGGGATCTGCCAGTaGACCAGCTGTCTCTGGGGT +
Preference number: 4 (lower is better)
Translates to: NGQSPMLPTQRILLGQLVMGICQ*TSCLWG
Trigger: ACCCCAGAGACAGCTGGTTCACTGGCAGATCCCCAT...CACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322350.10
CDS-3UTR TCA 90 bp TGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGACGACCGGCCCGGGGATaGAATTACAATCGAGTGGAA +
Preference number: 4 (lower is better)
Translates to: WTKSDASYTENSAGSARGRPARG*NYNRVE
Trigger: TTCCACTCGATTGTAATTTCATCCCCGGGCCGGTCG...TCCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354891.7
CDS-3UTR TCA 90 bp GGCCACCCAGGGATGCCTGTCTTGGTTCTCAGTTTCTCATCAGTGTGTACTTTCCACTCTTTCTGGCAGTaGAGCCCCTCAAAGCCCAAG +
Preference number: 4 (lower is better)
Translates to: GHPGMPVLVLSFSSVCTFHSFWQ*SPSKPK
Trigger: CTTGGGCTTTGAGGGGCTTCACTGCCAGAAAGAGTG...GAAAGTACACACTGATGAGAAACTGAGAACCAAGACAGGCATCCCTGGGTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354891.7
CDS-3UTR GCA 90 bp CACCCAAGTTACCTATCCATTCCACTGACACCACAAAAGGCCCAAACAAGTCTCGAGGAGGCCCTACCTTaGCTGGTTTTCGGATGGCCG +
Preference number: 4 (lower is better)
Translates to: HPSYLSIPLTPQKAQTSLEEALP*LVFGWP
Trigger: CGGCCATCCGAAAACCAGGCAAGGTAGGGCCTCCTC...GAGACTTGTTTGGGCCTTTTGTGGTGTCAGTGGAATGGATAGGTAACTTGGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322350.10
CDS-3UTR GCA 90 bp GATCTCTGGCAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGGAGGCCCTACCTTaGCTGGTTTTCGGATGGCCG +
Preference number: 4 (lower is better)
Translates to: DLWQPLHIQWTKSDASYTEEALP*LVFGWP
Trigger: CGGCCATCCGAAAACCAGGCAAGGTAGGGCCTCCTC...TGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTGCCAGAGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS-3UTR GCA 90 bp TTGGTGAGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGAGCCGTACAGTTCAATaGGCCCAGCTTGATGTCAAG +
Preference number: 4 (lower is better)
Translates to: LVRGNTPGPWASAYSIRQSRTVQ*AQLDVK
Trigger: CTTGACATCAAGCTGGGCGCATTGAACTGTACGGCT...CTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCTCACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS-3UTR GCA 90 bp GTACAGTTCAATGCGCCCAGCTTGATGTCAAGAGGAGGCCCTACCTTGCCTGTTCTGTGCAACTGCTCCTaGAGGGATTTATCTGCGCCA +
Preference number: 4 (lower is better)
Translates to: VQFNAPSLMSRGGPTLPVLCNCS*RDLSAP
Trigger: TGGCGCAGATAAATCCCTGCAGGAGCAGTTGCACAG...AACAGGCAAGGTAGGGCCTCCTCTTGACATCAAGCTGGGCGCATTGAACTGTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504709.1
CDS-3UTR GCA 90 bp GTGAGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTAGCCTGGCTGTAAGCTaGTATGCTCACACGATATTC +
Preference number: 4 (lower is better)
Translates to: VRGNTPGPWASAYSIRQGSLAVS*YAHTIF
Trigger: GAATATCGTGTGAGCATAGCAGCTTACAGCCAGGCT...ACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS-3UTR GCA 90 bp AATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGACAAAGTGGTGACATaGCGAGGAGAGCTCAGCCGC +
Preference number: 4 (lower is better)
Translates to: NGQSPMLPTQRILLGQLVDKVVT*RGELSR
Trigger: GCGGCTGAGCTCTCCTCGGCATGTCACCACTTTGTC...CACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS-3UTR GCA 90 bp CTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGCACCTTTGCCCAGGGTaGACTGGCATCGCGAGCCCC +
Preference number: 4 (lower is better)
Translates to: LHIQWTKSDASYTENSAGHLCPG*TGIASP
Trigger: GGGGCTCGCGATGCCAGTGCACCCTGGGCAAAGGTG...CCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
CDS-3UTR GCA 90 bp AGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGTCGGTTTGTCCCTGTTaGTCTAACCAACCAGTAAGC +
Preference number: 4 (lower is better)
Translates to: RGNTPGPWASAYSIRQGLSVCPC*SNQPVS
Trigger: GCTTACTGGTTGGTTAGAGCAACAGGGACAAACCGA...CAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
CDS-3UTR GCA 90 bp GACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGAGTCACAGATTCCACTGCTaGATTCCCCCACATCAGCCC +
Preference number: 4 (lower is better)
Translates to: DKVRCFLHREFCWVSSWSHRFHC*IPPHQP
Trigger: GGGCTGATGTGGGGGAATGCAGCAGTGGAATCTGTG...ACTCCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
CDS-3UTR GCA 90 bp TTGGTGAGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGCATCACAGATTCCACTaGTGCATTCCCCCACATCAG +
Preference number: 4 (lower is better)
Translates to: LVRGNTPGPWASAYSIRQHHRFH*CIPPHQ
Trigger: CTGATGTGGGGGAATGCAGCAGTGGAATCTGTGATG...CTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCTCACCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
CDS-3UTR GCA 90 bp CCAGCCAGTGAGGAGTGGAAGGGGTTAATCCGAACAATCCAAGGGCCAATGTGGATTCACCATGATGGATaGCACACCACTGCCCAGGTT +
Preference number: 4 (lower is better)
Translates to: PASEEWKGLIRTIQGPMWIHHDG*HTTAQV
Trigger: AACCTGGGCAGTGGTGTGGCATCCATCATGGTGAAT...CCACATTGGCCCTTGGATTGTTCGGATTAACCCCTTCCACTCCTCACTGGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR GCA 90 bp GACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGAGTACGGCCTTAACTCGGTaGCACCGACCATCGTTGAAG +
Preference number: 4 (lower is better)
Translates to: DKVRCFLHREFCWVSSWSTALTR*HRPSLK
Trigger: CTTCAACGATGGTCGGTGGCACCGAGTTAAGGCCGT...ACTCCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR GCA 90 bp CCAGCCAGTGAGGAGTGGAAGGGGTTAATCCGAACAATCCAAGGGCCAATGTGGTCATGCCTGGGGATTTaGCTGTTCTGGCTCCATAGT +
Preference number: 4 (lower is better)
Translates to: PASEEWKGLIRTIQGPMWSCLGI*LFWLHS
Trigger: ACTATGGAGCCAGAACAGGCAAATCCCCAGGCATGA...CCACATTGGCCCTTGGATTGTTCGGATTAACCCCTTCCACTCCTCACTGGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR GCA 90 bp CCAGCCAGTGAGGAGTGGAAGGGGTTAATCCGAACAATCCAAGGGCCAATGTGGCCATTGATGTTAAGCTaGCGCATCATGCCTGGGGAT +
Preference number: 4 (lower is better)
Translates to: PASEEWKGLIRTIQGPMWPLMLS*RIMPGD
Trigger: ATCCCCAGGCATGATGCGGCAGCTTAACATCAATGG...CCACATTGGCCCTTGGATTGTTCGGATTAACCCCTTCCACTCCTCACTGGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR GCA 90 bp GGCCACCCAGGGATGCCTGTCTTGGTTCTCAGTTTCTCATCAGTGTGTACTTTCTCCTCAGGGCCTGGATaGATGTTCTCTCAAGCCACC +
Preference number: 4 (lower is better)
Translates to: GHPGMPVLVLSFSSVCTFSSGPG*MFSQAT
Trigger: GGTGGCTTGAGAGAACATGCATCCAGGCCCTGAGGA...GAAAGTACACACTGATGAGAAACTGAGAACCAAGACAGGCATCCCTGGGTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336740.10
CDS-3UTR GCA 90 bp GTGAGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCCCAATTACTCTGGTTaGAGATCACTTGAAGCCAGC +
Preference number: 4 (lower is better)
Translates to: VRGNTPGPWASAYSIRQGPNYSG*RSLEAS
Trigger: GCTGGCTTCAAGTGATCTGCAACCAGAGTAATTGGG...ACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397210.7
ENST00000506135.5
CDS-3UTR CCA 90 bp AGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGACTTCCAGGATGCCTTaGCATTTTCCACTGGATGCT +
Preference number: 4 (lower is better)
Translates to: RGNTPGPWASAYSIRQGLTSRMP*HFPLDA
Trigger: AGCATCCAGTGGAAAATGCCAAGGCATCCTGGAAGT...CAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS-3UTR CCA 90 bp GCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCCGGGGGCTGGGGCCATaGGAATTCATTGCCCTCACG +
Preference number: 4 (lower is better)
Translates to: AATYSMDKVRCFLHREFCRGLGP*EFIALT
Trigger: CGTGAGGGCAATGAATTCCCATGGCCCCAGCCCCCG...GCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS-3UTR CCA 90 bp GTGAGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTAGAGCCTTGACATTATaGCCACACCATTCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: VRGNTPGPWASAYSIRQGRALTL*PHHSSP
Trigger: AGGGGAAGAATGGTGTGGCCATAATGTCAAGGCTCT...ACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
CDS-3UTR CCA 90 bp GTAAGTCCATCATGGGGATCTGCCAGTGAACCAGCTGTCTCTGGGGTCATGTGCTTCAGGATGATCTTCTaGATGCTCCCGCTGAAAGGC +
Preference number: 4 (lower is better)
Translates to: VSPSWGSASEPAVSGVMCFRMIF*MLPLKG
Trigger: GCCTTTCAGCGGGAGCATCCAGAAGATCATCCTGAA...GCACATGACCCCAGAGACAGCTGGTTCACTGGCAGATCCCCATGATGGACTTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322350.10
CDS-3UTR CCA 90 bp TCTCTGGCAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGACGCTGTTGGGTCTCATaGGGCTGTCTCCCCTCCACA +
Preference number: 4 (lower is better)
Translates to: SLAAATYSMDKVRCFLHRRCWVS*GCLPST
Trigger: TGTGGAGGGGAGACAGCCCCATGAGACCCAACAGCG...TCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTGCCAGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR CCA 90 bp TTGGTGAGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGTTGGACAAGGCCAGCTaGTGTTACTTGGCTCCACAA +
Preference number: 4 (lower is better)
Translates to: LVRGNTPGPWASAYSIRQLDKAS*CYLAPQ
Trigger: TTGTGGAGCCAAGTAACACCAGCTGGCCTTGTCCAA...CTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCTCACCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
ENST00000506135.5
CDS-3UTR CCA 90 bp GGCCACCCAGGGATGCCTGTCTTGGTTCTCAGTTTCTCATCAGTGTGTACTTTCGAAGGCTCTGTCCCTTaGACAAGGCCAGCTGGTGTT +
Preference number: 4 (lower is better)
Translates to: GHPGMPVLVLSFSSVCTFEGSVP*TRPAGV
Trigger: AACACCAGCTGGCCTTGTCCAAGGGACAGAGCCTTC...GAAAGTACACACTGATGAGAAACTGAGAACCAAGACAGGCATCCCTGGGTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR CCA 90 bp AATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGTGCTGGGTCAGCTCGTaGAGTGTCAGCAGGAAAGGC +
Preference number: 4 (lower is better)
Translates to: NGQSPMLPTQRILLGQLVCWVSS*SVSRKG
Trigger: GCCTTTCCTGCTGACACTCCACGAGCTGACCCAGCA...CACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR CCA 90 bp ACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGAGGGCCCCTTTTAATAGTGCCCTGTaGGATTCTTTCTCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: TPGPWASAYSIRQGLRAPFNSAL*DSFSLS
Trigger: AGAGAGAGAGAAAGAATCCCACAGGGCACTATTAAA...AGGGGCCCTCAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
3UTR CAA 72 bp AATGCGCCCAGCTTGATGTCAAGAGGAGGCCCTACCTaGCCTGTTCCAGTTGGACTGGTTGCCTTTTCTATC +
Preference number: 4 (lower is better)
Translates to: NAPSLMSRGGPT*PVPVGLVAFSI
Trigger: GATAGAAAAGGCAACCAGTCCAACTGGAACAGGCAAGGTAGGGCCTCCTCTTGACATCAAGCTGGGCGCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504709.1
CDS-3UTR TCA 90 bp AATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGTGTAGGAGTCGGCTTTaGTTGCTGTGCAGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: NGQSPMLPTQRILLGQLVCRSRL*LLCRCH
Trigger: GTGGCACCTGCACAGCAATCAAAGCCGACTCCTACA...CACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR TCA 90 bp GTGAGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTAGAGACTCTCTGAACTaGGGAATGGTCAAGGTGAAA +
Preference number: 4 (lower is better)
Translates to: VRGNTPGPWASAYSIRQGRDSLN*GMVKVK
Trigger: TTTCACCTTGACCATTCCTCAGTTCAGAGAGTCTCT...ACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR TCA 90 bp CAGGCTCTGGAATTTGCATTGATGTGTGATCTCTGGCAGCCGCTACATATTCAATCTGGATGCTCCCGCTaGAAGGCTTCAGGACACCCG +
Preference number: 4 (lower is better)
Translates to: QALEFALMCDLWQPLHIQSGCSR*KASGHP
Trigger: CGGGTGTCCTGAAGCCTTTCAGCGGGAGCATCCAGA...TTGAATATGTAGCGGCTGCCAGAGATCACACATCAATGCAAATTCCAGAGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR TCA 90 bp TCTCTGGCAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGATGCCCAGGTTATAGCTaGACACGAGGGCTCCATCCC +
Preference number: 4 (lower is better)
Translates to: SLAAATYSMDKVRCFLHRCPGYS*TRGLHP
Trigger: GGGATGGAGCCCTCGTGTTCAGCTATAACCTGGGCA...TCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTGCCAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR TCA 90 bp TTGGTGAGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGTACTTTCTTCTTGGTaGGAGGAAACACACCTGGTC +
Preference number: 4 (lower is better)
Translates to: LVRGNTPGPWASAYSIRQVLSSW*EETHLV
Trigger: GACCAGGTGTGTTTCCTCTCACCAAGAAGAAAGTAC...CTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCTCACCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
ENST00000506135.5
CDS-3UTR TCA 90 bp TTGGTGAGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGATTTGCATTGATGTGTaGTCTCTGGCAGCCGCTACA +
Preference number: 4 (lower is better)
Translates to: LVRGNTPGPWASAYSIRQICIDV*SLAAAT
Trigger: TGTAGCGGCTGCCAGAGATCACACATCAATGCAAAT...CTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCTCACCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR TCA 90 bp GTGAGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCCAATGTGGGAAATGTaGAGTTCAAGGTCACACAGT +
Preference number: 4 (lower is better)
Translates to: VRGNTPGPWASAYSIRQGPMWEM*SSRSHS
Trigger: ACTGTGTGACCTTGAACTTCACATTTCCCACATTGG...ACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR GCA 90 bp TGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGACTGTGCAACTGCTCCTaGAGGGATTTATCTGCGCCA +
Preference number: 4 (lower is better)
Translates to: WTKSDASYTENSAGSARGLCNCS*RDLSAP
Trigger: TGGCGCAGATAAATCCCTGCAGGAGCAGTTGCACAG...TCCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS-3UTR GCA 90 bp ATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGGGCACGCTGTGCAACTaGTCCTGCAGGGATTTATCT +
Preference number: 4 (lower is better)
Translates to: MDKVRCFLHREFCWVSSWGTLCN*SCRDLS
Trigger: AGATAAATCCCTGCAGGAGCAGTTGCACAGCGTGCC...CCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS-3UTR GCA 90 bp ACATTCGAGGTAAGCTCTGGGGAAGGGGGCCGCATTATGATTATGATTCTGTGTAGCTCTCACCACCTTTaGCCAGGGTGCACTGGCATC +
Preference number: 4 (lower is better)
Translates to: TFEVSSGEGGRIMIMILCSSHHL*PGCTGI
Trigger: GATGCCAGTGCACCCTGGGCAAAGGTGGTGAGAGCT...ACACAGAATCATAATCATAATGCGGCCCCCTTCCCCAGAGCTTACCTCGAATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322350.10
CDS-3UTR GCA 90 bp ACATTCGAGGTAAGCTCTGGGGAAGGGGGCCGCATTATGATTATGATTCTGTGTGGCCTGTCACTGGGGTaGCATTGTTCAGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: TFEVSSGEGGRIMIMILCGLSLG*HCSAAA
Trigger: TGCTGCAGCTGAACAATGGCACCCCAGTGACAGGCC...ACACAGAATCATAATCATAATGCGGCCCCCTTCCCCAGAGCTTACCTCGAATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000322350.10
CDS-3UTR GCA 90 bp AATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGGAGTCGGCTTTGATTaGTGTGCAGGTGCCACCATG +
Preference number: 4 (lower is better)
Translates to: NGQSPMLPTQRILLGQLVGVGFD*CAGATM
Trigger: CATGGTGGCACCTGCACAGCAATCAAAGCCGACTCC...CACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR GCA 90 bp AGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGACAGGAAGTCTTTGCTaGCTGTGTCATAGCTGTACA +
Preference number: 4 (lower is better)
Translates to: RGNTPGPWASAYSIRQGLTGSLC*LCHSCT
Trigger: TGTACAGCTATGACACAGGCAGCAAAGACTTCCTGT...CAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR GCA 90 bp GACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGAGTCCGGAGGTGAAGTCATaGTTCACATGGATGGTTCGG +
Preference number: 4 (lower is better)
Translates to: DKVRCFLHREFCWVSSWSPEVKS*FTWMVR
Trigger: CCGAACCATCCATGTGAAGCATGACTTCACCTCCGG...ACTCCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR GCA 90 bp ACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGAGGGCCCCTTATTGCCTGTTAGTGTaGAGAGCAATTTCCTTCATT +
Preference number: 4 (lower is better)
Translates to: TPGPWASAYSIRQGLRAPYCLLV*RAISFI
Trigger: AATGAAGGAAATTGCTCTGCACACTAACAGGCAATA...AGGGGCCCTCAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
ENST00000506135.5
CDS-3UTR GCA 90 bp AGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGAGCCCTCTCATATATTaGCTGTTAGTGTGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: RGNTPGPWASAYSIRQGLSPLIY*LLVCRA
Trigger: TGCTCTGCACACTAACAGGCAATATATGAGAGGGCT...CAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
ENST00000506135.5
CDS-3UTR GCA 90 bp GTGAGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTAGCCCTCTCATATATTaGCTGTTAGTGTGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: VRGNTPGPWASAYSIRQGSPLIY*LLVCRA
Trigger: TGCTCTGCACACTAACAGGCAATATATGAGAGGGCT...ACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
ENST00000506135.5
CDS-3UTR GCA 90 bp GTGAGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTGTCACACAGTCATTCTaGTGTCAGGAAGAGTGTCAT +
Preference number: 4 (lower is better)
Translates to: VRGNTPGPWASAYSIRQGVTQSF*CQEECH
Trigger: ATGACACTCTTCCTGACAGCAGAATGACTGTGTGAC...ACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCTCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR GCA 90 bp GACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGAGTAATAGCACACTGCCCTaGTCCATCCTGCCTGGGATA +
Preference number: 4 (lower is better)
Translates to: DKVRCFLHREFCWVSSWSNSTLP*SILPGI
Trigger: TATCCCAGGCAGGATGGAGCAGGGCAGTGTGCTATT...ACTCCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336740.10
ENST00000397202.6
CDS-3UTR CCA 90 bp CTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGGCTGGGGAGCCACCGTaGTCACAGGGAGAGATGCTG +
Preference number: 4 (lower is better)
Translates to: LHIQWTKSDASYTENSAGAGEPP*SQGEML
Trigger: CAGCATCTCTCCCTGTGACCACGGTGGCTCCCCAGC...CCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
CDS-3UTR CCA 90 bp AATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGAGACTGGCCTGTCACTaGGGTGCCATTGTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: NGQSPMLPTQRILLGQLVRLACH*GAIVQL
Trigger: CAGCTGAACAATGGCACCCCAGTGACAGGCCAGTCT...CACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR CCA 90 bp TCTGGCAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAGCTCTCACACAGGGGTaGGCCGCATTCTCCACATTC +
Preference number: 4 (lower is better)
Translates to: SGSRYIFNGQSPMLPTQRALTQG*AAFSTF
Trigger: GAATGTGGAGAATGCGGCCCACCCCTGTGTGAGAGC...TCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTGCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR CCA 90 bp GCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCCGCTGTTGGGTCTCATaGGGCTGTCTCCCCTCCACA +
Preference number: 4 (lower is better)
Translates to: AATYSMDKVRCFLHREFCRCWVS*GCLPST
Trigger: TGTGGAGGGGAGACAGCCCCATGAGACCCAACAGCG...GCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR CCA 90 bp CCAGCCAGTGAGGAGTGGAAGGGGTTAATCCGAACAATCCAAGGGCCAATGTGGGTTATCTTTCCTGACTaGCCATCCCTAACGGCCTTA +
Preference number: 4 (lower is better)
Translates to: PASEEWKGLIRTIQGPMWVIFPD*PSLTAL
Trigger: TAAGGCCGTTAGGGATGGCCAGTCAGGAAAGATAAC...CCACATTGGCCCTTGGATTGTTCGGATTAACCCCTTCCACTCCTCACTGGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR CCA 90 bp GGCCACCCAGGGATGCCTGTCTTGGTTCTCAGTTTCTCATCAGTGTGTACTTTCGGGATTTGCCTGTTCTaGCTCCATAGTCATCCACGG +
Preference number: 4 (lower is better)
Translates to: GHPGMPVLVLSFSSVCTFGICLF*LHSHPR
Trigger: CCGTGGATGACTATGGAGCCAGAACAGGCAAATCCC...GAAAGTACACACTGATGAGAAACTGAGAACCAAGACAGGCATCCCTGGGTGGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR CCA 90 bp TGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGAGGGATTTGCCTGTTCTaGCTCCATAGTCATCCACGG +
Preference number: 4 (lower is better)
Translates to: WTKSDASYTENSAGSARGGICLF*LHSHPR
Trigger: CCGTGGATGACTATGGAGCCAGAACAGGCAAATCCC...TCCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR CCA 90 bp TCTCTGGCAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGACTGCCGCATCATGCCTaGGGATTTGCCTGTTCTGGC +
Preference number: 4 (lower is better)
Translates to: SLAAATYSMDKVRCFLHRLPHHA*GFACSG
Trigger: GCCAGAACAGGCAAATCCCCAGGCATGATGCGGCAG...TCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTGCCAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR CCA 90 bp ATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGATTTCACCCCCTCCTTaGGGGCAGTGTTCATCTCAC +
Preference number: 4 (lower is better)
Translates to: MDKVRCFLHREFCWVSSWISPPP*GQCSSH
Trigger: GTGAGATGAACACTGCCCCCAAGGAGGGGGTGAAAT...CCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322350.10
CDS-3UTR TCA 90 bp AATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGCCCAGGTGTAGTCATTaGCACAGAAGCTGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: NGQSPMLPTQRILLGQLVPRCSH*HRSCQQ
Trigger: CTGCTGACAGCTTCTGTGTCAATGACTACACCTGGG...CACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
CDS-3UTR TCA 90 bp GATCTCTGGCAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACATGTAGGAGTCGGCTTTaGTTGCTGTGCAGGTGCCAC +
Preference number: 4 (lower is better)
Translates to: DLWQPLHIQWTKSDASYTCRSRL*LLCRCH
Trigger: GTGGCACCTGCACAGCAATCAAAGCCGACTCCTACA...TGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTGCCAGAGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR TCA 90 bp TTGGTGAGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGAGAGACTCTCTGAACTaGGGAATGGTCAAGGTGAAA +
Preference number: 4 (lower is better)
Translates to: LVRGNTPGPWASAYSIRQRDSLN*GMVKVK
Trigger: TTTCACCTTGACCATTCCTCAGTTCAGAGAGTCTCT...CTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCTCACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR TCA 90 bp AATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGAGGACACCATCTCCTaGGTCTGGCCGAAATGTGAT +
Preference number: 4 (lower is better)
Translates to: NGQSPMLPTQRILLGQLVEDTIS*VWPKCD
Trigger: ATCACATTTCGGCCAGACTCAGGAGATGGTGTCCTC...CACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR TCA 90 bp ATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGTGGGGACTCCGCCAATaGAAATGTCTGTGTTGCACT +
Preference number: 4 (lower is better)
Translates to: MDKVRCFLHREFCWVSSWWGLRQ*KCLCCT
Trigger: AGTGCAACACAGACATTTTCATTGGCGGAGTCCCCA...CCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR TCA 90 bp GGCCACCCAGGGATGCCTGTCTTGGTTCTCAGTTTCTCATCAGTGTGTACTTTCTGGGGACTCCGCCAATaGAAATGTCTGTGTTGCACT +
Preference number: 4 (lower is better)
Translates to: GHPGMPVLVLSFSSVCTFWGLRQ*KCLCCT
Trigger: AGTGCAACACAGACATTTTCATTGGCGGAGTCCCCA...GAAAGTACACACTGATGAGAAACTGAGAACCAAGACAGGCATCCCTGGGTGGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR TCA 90 bp TTCAGAGTCATCCACCCAAACTTCCAAAAGTATACTGTGTGGACAATCTGCAGCTCTGGATGCTCCCGCTaGAAGGCTTCAGGACACCCG +
Preference number: 4 (lower is better)
Translates to: FRVIHPNFQKYTVWTICSSGCSR*KASGHP
Trigger: CGGGTGTCCTGAAGCCTTTCAGCGGGAGCATCCAGA...GCTGCAGATTGTCCACACAGTATACTTTTGGAAGTTTGGGTGGATGACTCTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322350.10
CDS-3UTR TCA 90 bp GACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGAGTCATTCACTCCGGAGGTaGAGTCATGCTTCACATGGA +
Preference number: 4 (lower is better)
Translates to: DKVRCFLHREFCWVSSWSHSLRR*SHASHG
Trigger: TCCATGTGAAGCATGACTTCACCTCCGGAGTGAATG...ACTCCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR TCA 90 bp CCCTGCACAGCCTTGGGAACACTGATTGTATTAGTGTCCATTGGTATGAACCTGATCGCTTTCTGGCAGTaGAGCCCCTCAAAGCCCAAG +
Preference number: 4 (lower is better)
Translates to: PCTALGTLIVLVSIGMNLIAFWQ*SPSKPK
Trigger: CTTGGGCTTTGAGGGGCTTCACTGCCAGAAAGCGAT...CAGGTTCATACCAATGGACACTAATACAATCAGTGTTCCCAAGGCTGTGCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322350.10
CDS-3UTR TCA 90 bp GATCTCTGGCAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACACACGGTTATCTTTCCTaGCTGGCCATCCCTAACGGC +
Preference number: 4 (lower is better)
Translates to: DLWQPLHIQWTKSDASYTHGYLS*LAIPNG
Trigger: GCCGTTAGGGATGGCCAGTCAGGAAAGATAACCGTG...TGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTGCCAGAGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR TCA 90 bp TCTGGCAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGACACGGTTATCTTTCCTaGCTGGCCATCCCTAACGGC +
Preference number: 4 (lower is better)
Translates to: SGSRYIFNGQSPMLPTQRHGYLS*LAIPNG
Trigger: GCCGTTAGGGATGGCCAGTCAGGAAAGATAACCGTG...TCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTGCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR TCA 90 bp GGCCACCCAGGGATGCCTGTCTTGGTTCTCAGTTTCTCATCAGTGTGTACTTTCTGGCTCCACAAGTGTTaGTGTTTTTCCCATCCACGG +
Preference number: 4 (lower is better)
Translates to: GHPGMPVLVLSFSSVCTFWLHKC*CFSHPR
Trigger: CCGTGGATGGGAAAAACATCAACACTTGTGGAGCCA...GAAAGTACACACTGATGAGAAACTGAGAACCAAGACAGGCATCCCTGGGTGGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR TCA 90 bp TGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGATCACAACACAGTCACTaGGCTATAGCAGACAGGCTC +
Preference number: 4 (lower is better)
Translates to: WTKSDASYTENSAGSARGSQHSH*AIADRL
Trigger: GAGCCTGTCTGCTATAGCTCAGTGACTGTGTTGTGA...TCCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR TCA 90 bp GACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGAGTTCACAACACAGTCACTaGGCTATAGCAGACAGGCTC +
Preference number: 4 (lower is better)
Translates to: DKVRCFLHREFCWVSSWSSQHSH*AIADRL
Trigger: GAGCCTGTCTGCTATAGCTCAGTGACTGTGTTGTGA...ACTCCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR TCA 90 bp CCAGCCAGTGAGGAGTGGAAGGGGTTAATCCGAACAATCCAAGGGCCAATGTGGCCAATGTGGGAAATGTaGAGTTCAAGGTCACACAGT +
Preference number: 4 (lower is better)
Translates to: PASEEWKGLIRTIQGPMWPMWEM*SSRSHS
Trigger: ACTGTGTGACCTTGAACTTCACATTTCCCACATTGG...CCACATTGGCCCTTGGATTGTTCGGATTAACCCCTTCCACTCCTCACTGGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR GCA 90 bp GCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTTCGCAGCCGGCGCCTaGAAAGTTTCACCAAGTCCC +
Preference number: 4 (lower is better)
Translates to: AATYSMDKVRCFLHREFCFAAGA*KVSPSP
Trigger: GGGACTTGGTGAAACTTTGCAGGCGCCGGCTGCGAA...GCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS-3UTR GCA 90 bp GGCTGTAAGCTGCTATGCTCACACGATATTCAGTGCCTGGTTTCAAATCTCCAACTGAGAGGCACGCTGTaGAACTGCTCCTGCAGGGAT +
Preference number: 4 (lower is better)
Translates to: GCKLLCSHDIQCLVSNLQLRGTL*NCSCRD
Trigger: ATCCCTGCAGGAGCAGTTGCACAGCGTGCCTCTCAG...TTGGAGATTTGAAACCAGGCACTGAATATCGTGTGAGCATAGCAGCTTACAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504709.1
CDS-3UTR GCA 90 bp CTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGAGCTCAGCCGCCCTTTaGCAGCCTGGCTGTAAGCTG +
Preference number: 4 (lower is better)
Translates to: LHIQWTKSDASYTENSAGSSAAL*QPGCKL
Trigger: CAGCTTACAGCCAGGCTGGCAAAGGGCGGCTGAGCT...CCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS-3UTR GCA 90 bp GCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCGTGCCATTGTTCAGCTaGAGCAGCCCGTTCAGCCCA +
Preference number: 4 (lower is better)
Translates to: AATYSMDKVRCFLHREFCVPLFS*SSPFSP
Trigger: TGGGCTGAACGGGCTGCTGCAGCTGAACAATGGCAC...GCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR GCA 90 bp GCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCGGCCTGTCACTGGGGTaGCATTGTTCAGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: AATYSMDKVRCFLHREFCGLSLG*HCSAAA
Trigger: TGCTGCAGCTGAACAATGGCACCCCAGTGACAGGCC...GCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR GCA 90 bp TTCACATTCGAGGTAAGCTCTGGGGAAGGGGGCCGCATTATGATTATGATTCTGGGAGTCGGCTTTGATTaGTGTGCAGGTGCCACCATG +
Preference number: 4 (lower is better)
Translates to: FTFEVSSGEGGRIMIMILGVGFD*CAGATM
Trigger: CATGGTGGCACCTGCACAGCAATCAAAGCCGACTCC...CAGAATCATAATCATAATGCGGCCCCCTTCCCCAGAGCTTACCTCGAATGTGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322350.10
CDS-3UTR GCA 90 bp GCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCCTCCACGTGGCCCCCTaGCAAGTTGATGGACAGGAA +
Preference number: 4 (lower is better)
Translates to: AATYSMDKVRCFLHREFCLHVAP*QVDGQE
Trigger: TTCCTGTCCATCAACTTGGCAGGGGGCCACGTGGAG...GCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR GCA 90 bp ATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGATTCACCATGATGGATaGCACACCACTGCCCAGGTT +
Preference number: 4 (lower is better)
Translates to: MDKVRCFLHREFCWVSSWIHHDG*HTTAQV
Trigger: AACCTGGGCAGTGGTGTGGCATCCATCATGGTGAAT...CCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR GCA 90 bp TGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGAATTCACCATGATGGATaGCACACCACTGCCCAGGTT +
Preference number: 4 (lower is better)
Translates to: WTKSDASYTENSAGSARGIHHDG*HTTAQV
Trigger: AACCTGGGCAGTGGTGTGGCATCCATCATGGTGAAT...TCCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR GCA 90 bp GATCTCTGGCAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAACGGCCTTAACTCGGTaGCACCGACCATCGTTGAAG +
Preference number: 4 (lower is better)
Translates to: DLWQPLHIQWTKSDASYTTALTR*HRPSLK
Trigger: CTTCAACGATGGTCGGTGGCACCGAGTTAAGGCCGT...TGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTGCCAGAGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR GCA 90 bp GACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGAGTTCATGCCTGGGGATTTaGCTGTTCTGGCTCCATAGT +
Preference number: 4 (lower is better)
Translates to: DKVRCFLHREFCWVSSWSSCLGI*LFWLHS
Trigger: ACTATGGAGCCAGAACAGGCAAATCCCCAGGCATGA...ACTCCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR GCA 90 bp AACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGAGGGCCTATTGCCTGTTAGTGTaGAGAGCAATTTCCTTCATT +
Preference number: 4 (lower is better)
Translates to: NTPGPWASAYSIRQGLRAYCLLV*RAISFI
Trigger: AATGAAGGAAATTGCTCTGCACACTAACAGGCAATA...GGCCCTCAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
ENST00000506135.5
CDS-3UTR GCA 90 bp GTGAGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTATGGACAAAGTCCGATaGTTCCTACACAGAGAATTC +
Preference number: 4 (lower is better)
Translates to: VRGNTPGPWASAYSIRQGMDKVR*FLHREF
Trigger: GAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCAT...ACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR GCA 90 bp AGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGATGGACAAAGTCCGATaGTTCCTACACAGAGAATTC +
Preference number: 4 (lower is better)
Translates to: RGNTPGPWASAYSIRQGLMDKVR*FLHREF
Trigger: GAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCAT...CAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR GCA 90 bp AATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGAATAGCACACTGCCCTaGTCCATCCTGCCTGGGATA +
Preference number: 4 (lower is better)
Translates to: NGQSPMLPTQRILLGQLVNSTLP*SILPGI
Trigger: TATCCCAGGCAGGATGGAGCAGGGCAGTGTGCTATT...CACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336740.10
ENST00000397202.6
CDS-3UTR GCA 90 bp GATCTCTGGCAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACACCACACTCTGCCCGGTaGCAGCATGAAAGAGAACAG +
Preference number: 4 (lower is better)
Translates to: DLWQPLHIQWTKSDASYTPHSAR*QHEREQ
Trigger: CTGTTCTCTTTCATGCTGGCACCGGGCAGAGTGTGG...TGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTGCCAGAGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397210.7
CDS-3UTR CCA 90 bp ACTGCTCCTGCAGGGATTTATCTGCGCCAACCTCAGAGTAAAAGACAGTGTACCGGCAGGCAGGAATCTTaGGACAAAGTGGTGACATGC +
Preference number: 4 (lower is better)
Translates to: TAPAGIYLRQPQSKRQCTGRQES*DKVVTC
Trigger: GCATGTCACCACTTTGTCCCAAGATTCCTGCCTGCC...GGTACACTGTCTTTTACTCTGAGGTTGGCGCAGATAAATCCCTGCAGGAGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504709.1
CDS-3UTR CCA 90 bp GGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGAGCTGGTAGTTGGTATCTaGATCGAGGCCCTTGATAAC +
Preference number: 4 (lower is better)
Translates to: GQSPMLPTQRILLGQLVELVVGI*IEALDN
Trigger: GTTATCAAGGGCCTCGATCCAGATACCAACTACCAG...CTCCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS-3UTR CCA 90 bp CAGAAGGAAGAAGTCCTGTTTCTCTGGTTCTCACCCAGATGCTCAGACCATCCTCGGCAAACTGGTAGTTaGTATCTGGATCGAGGCCCT +
Preference number: 4 (lower is better)
Translates to: QKEEVLFLWFSPRCSDHPRQTGS*YLDRGP
Trigger: AGGGCCTCGATCCAGATACCAACTACCAGTTTGCCG...AGGATGGTCTGAGCATCTGGGTGAGAACCAGAGAAACAGGACTTCTTCCTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322350.10
CDS-3UTR CCA 90 bp GATCTCTGGCAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAAGACTGGCCTGTCACTaGGGTGCCATTGTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: DLWQPLHIQWTKSDASYTRLACH*GAIVQL
Trigger: CAGCTGAACAATGGCACCCCAGTGACAGGCCAGTCT...TGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTGCCAGAGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR CCA 90 bp CTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGCGCTGTTGGGTCTCATaGGGCTGTCTCCCCTCCACA +
Preference number: 4 (lower is better)
Translates to: LHIQWTKSDASYTENSAGRCWVS*GCLPST
Trigger: TGTGGAGGGGAGACAGCCCCATGAGACCCAACAGCG...CCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR CCA 90 bp CAGGCTCTGGAATTTGCATTGATGTGTGATCTCTGGCAGCCGCTACATATTCAACTGCCGCATCATGCCTaGGGATTTGCCTGTTCTGGC +
Preference number: 4 (lower is better)
Translates to: QALEFALMCDLWQPLHIQLPHHA*GFACSG
Trigger: GCCAGAACAGGCAAATCCCCAGGCATGATGCGGCAG...TTGAATATGTAGCGGCTGCCAGAGATCACACATCAATGCAAATTCCAGAGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR CCA 90 bp GCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCCTGCCGCATCATGCCTaGGGATTTGCCTGTTCTGGC +
Preference number: 4 (lower is better)
Translates to: AATYSMDKVRCFLHREFCLPHHA*GFACSG
Trigger: GCCAGAACAGGCAAATCCCCAGGCATGATGCGGCAG...GCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR CCA 90 bp AATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGCACAGAGAATTCTGCTaGGTCAGCTCGTGGAGTGTC +
Preference number: 4 (lower is better)
Translates to: NGQSPMLPTQRILLGQLVHREFC*VSSWSV
Trigger: GACACTCCACGAGCTGACCCAGCAGAATTCTCTGTG...CACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR CCA 90 bp AGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGTTGATGTGTGATCTCTaGCAGCCGCTACATATTCAA +
Preference number: 4 (lower is better)
Translates to: RGNTPGPWASAYSIRQGLLMCDL*QPLHIQ
Trigger: TTGAATATGTAGCGGCTGCCAGAGATCACACATCAA...CAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR CCA 90 bp GCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCATGCTCCCTGCCCCATaGTCTGCAGCCGTCTCAGTT +
Preference number: 4 (lower is better)
Translates to: AATYSMDKVRCFLHREFCMLPAP*SAAVSV
Trigger: AACTGAGACGGCTGCAGACCATGGGGCAGGGAGCAT...GCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336740.10
3UTR CAA 72 bp TCTGCCAGTGAACCAGCTGTCTCTGGGGTCATGTGCTaGCATAGTAAAGGGACACAGCTCATGGTACAGAAG +
Preference number: 4 (lower is better)
Translates to: SASEPAVSGVMC*HSKGTQLMVQK
Trigger: CTTCTGTACCATGAGCTGTGTCCCTTTACTATGCAAGCACATGACCCCAGAGACAGCTGGTTCACTGGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322350.10
CDS-3UTR TCA 90 bp CAGGCTCTGGAATTTGCATTGATGTGTGATCTCTGGCAGCCGCTACATATTCAACTTGGGACAAAGTGGTaGCATGCCGAGGAGAGCTCA +
Preference number: 4 (lower is better)
Translates to: QALEFALMCDLWQPLHIQLGTKW*HAEESS
Trigger: TGAGCTCTCCTCGGCATGTCACCACTTTGTCCCAAG...TTGAATATGTAGCGGCTGCCAGAGATCACACATCAATGCAAATTCCAGAGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS-3UTR TCA 90 bp TCTCTGGCAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAAATCCGAAACCACAATaGCATGTGGCTGCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: SLAAATYSMDKVRCFLHRNPKPQ*HVAAGE
Trigger: CTCCCCAGCAGCCACATGTCATTGTGGTTTCGGATT...TCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTGCCAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS-3UTR TCA 90 bp CCAGCCAGTGAGGAGTGGAAGGGGTTAATCCGAACAATCCAAGGGCCAATGTGGGATAACAATATCTTCTaGGCAGCTCTCACCACCTTT +
Preference number: 4 (lower is better)
Translates to: PASEEWKGLIRTIQGPMWDNNIF*AALTTF
Trigger: AAAGGTGGTGAGAGCTGCTCAGAAGATATTGTTATC...CCACATTGGCCCTTGGATTGTTCGGATTAACCCCTTCCACTCCTCACTGGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS-3UTR TCA 90 bp CCCTGCACAGCCTTGGGAACACTGATTGTATTAGTGTCCATTGGTATGAACCTGTGGTCTCACTTACGATaGTGGCAACCCCAGTTCCAC +
Preference number: 4 (lower is better)
Translates to: PCTALGTLIVLVSIGMNLWSHLR*WQPQFH
Trigger: GTGGAACTGGGGTTGCCATCATCGTAAGTGAGACCA...CAGGTTCATACCAATGGACACTAATACAATCAGTGTTCCCAAGGCTGTGCAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322350.10
CDS-3UTR TCA 90 bp GGCCACCCAGGGATGCCTGTCTTGGTTCTCAGTTTCTCATCAGTGTGTACTTTCGCCAACCCCCTAGTTTaGTTTTGGTCTCACTTACGA +
Preference number: 4 (lower is better)
Translates to: GHPGMPVLVLSFSSVCTFANPLV*FWSHLR
Trigger: TCGTAAGTGAGACCAAAATCAAACTAGGGGGTTGGC...GAAAGTACACACTGATGAGAAACTGAGAACCAAGACAGGCATCCCTGGGTGGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR TCA 90 bp ATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGGCCAACCCCCTAGTTTaGTTTTGGTCTCACTTACGA +
Preference number: 4 (lower is better)
Translates to: MDKVRCFLHREFCWVSSWANPLV*FWSHLR
Trigger: TCGTAAGTGAGACCAAAATCAAACTAGGGGGTTGGC...CCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR TCA 90 bp TGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGAGAGGAATGGTCAAGGTaGAAGCATCTTCACAGTGTC +
Preference number: 4 (lower is better)
Translates to: WTKSDASYTENSAGSARGEEWSR*KHLHSV
Trigger: GACACTGTGAAGATGCTTTCACCTTGACCATTCCTC...TCCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR TCA 90 bp TTCACATTCGAGGTAAGCTCTGGGGAAGGGGGCCGCATTATGATTATGATTCTGGAGGACACCATCTCCTaGGTCTGGCCGAAATGTGAT +
Preference number: 4 (lower is better)
Translates to: FTFEVSSGEGGRIMIMILEDTIS*VWPKCD
Trigger: ATCACATTTCGGCCAGACTCAGGAGATGGTGTCCTC...CAGAATCATAATCATAATGCGGCCCCCTTCCCCAGAGCTTACCTCGAATGTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322350.10
CDS-3UTR TCA 90 bp AATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGCATTCACTCCGGAGGTaGAGTCATGCTTCACATGGA +
Preference number: 4 (lower is better)
Translates to: NGQSPMLPTQRILLGQLVHSLRR*SHASHG
Trigger: TCCATGTGAAGCATGACTTCACCTCCGGAGTGAATG...CACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR TCA 90 bp ATCACAACACAGTCACTGAGCTATAGCAGACAGGCTCTGGAATTTGCATTGATGTGCCCAGGTTATAGCTaGACACGAGGGCTCCATCCC +
Preference number: 4 (lower is better)
Translates to: ITTQSLSYSRQALEFALMCPGYS*TRGLHP
Trigger: GGGATGGAGCCCTCGTGTTCAGCTATAACCTGGGCA...CATCAATGCAAATTCCAGAGCCTGTCTGCTATAGCTCAGTGACTGTGTTGTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR TCA 90 bp GCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCCACGGTTATCTTTCCTaGCTGGCCATCCCTAACGGC +
Preference number: 4 (lower is better)
Translates to: AATYSMDKVRCFLHREFCHGYLS*LAIPNG
Trigger: GCCGTTAGGGATGGCCAGTCAGGAAAGATAACCGTG...GCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR TCA 90 bp TCTGGCAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAAATCGGTGGACAGGGTaGAGTGAGAGATACAGCCCA +
Preference number: 4 (lower is better)
Translates to: SGSRYIFNGQSPMLPTQRNRWTG*SERYSP
Trigger: TGGGCTGTATCTCTCACTTCACCCTGTCCACCGATT...TCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTGCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR TCA 90 bp CAGAAGGAAGAAGTCCTGTTTCTCTGGTTCTCACCCAGATGCTCAGACCATCCTTGGCTCCACAAGTGTTaGTGTTTTTCCCATCCACGG +
Preference number: 4 (lower is better)
Translates to: QKEEVLFLWFSPRCSDHPWLHKC*CFSHPR
Trigger: CCGTGGATGGGAAAAACATCAACACTTGTGGAGCCA...AGGATGGTCTGAGCATCTGGGTGAGAACCAGAGAAACAGGACTTCTTCCTTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322350.10
CDS-3UTR TCA 90 bp ATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGGTACTTTCTTCTTGGTaGGAGGAAACACACCTGGTC +
Preference number: 4 (lower is better)
Translates to: MDKVRCFLHREFCWVSSWVLSSW*EETHLV
Trigger: GACCAGGTGTGTTTCCTCTCACCAAGAAGAAAGTAC...CCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR TCA 90 bp GGCCACCCAGGGATGCCTGTCTTGGTTCTCAGTTTCTCATCAGTGTGTACTTTCATTTGCATTGATGTGTaGTCTCTGGCAGCCGCTACA +
Preference number: 4 (lower is better)
Translates to: GHPGMPVLVLSFSSVCTFICIDV*SLAAAT
Trigger: TGTAGCGGCTGCCAGAGATCACACATCAATGCAAAT...GAAAGTACACACTGATGAGAAACTGAGAACCAAGACAGGCATCCCTGGGTGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR TCA 90 bp AATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGTCACAACACAGTCACTaGGCTATAGCAGACAGGCTC +
Preference number: 4 (lower is better)
Translates to: NGQSPMLPTQRILLGQLVSQHSH*AIADRL
Trigger: GAGCCTGTCTGCTATAGCTCAGTGACTGTGTTGTGA...CACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR TCA 90 bp TCTGGCAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATCCTGCCTGGGATATaGATCATCCCTCTGTCTGGC +
Preference number: 4 (lower is better)
Translates to: SGSRYIFNGQSPMLPTQRILPGI*IIPLSG
Trigger: GCCAGACAGAGGGATGATTCATATCCCAGGCAGGAT...TCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTGCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336740.10
ENST00000397202.6
CDS-3UTR GCA 90 bp ATCACAACACAGTCACTGAGCTATAGCAGACAGGCTCTGGAATTTGCATTGATGCTGAGAGGCACGCTGTaGAACTGCTCCTGCAGGGAT +
Preference number: 4 (lower is better)
Translates to: ITTQSLSYSRQALEFALMLRGTL*NCSCRD
Trigger: ATCCCTGCAGGAGCAGTTGCACAGCGTGCCTCTCAG...CATCAATGCAAATTCCAGAGCCTGTCTGCTATAGCTCAGTGACTGTGTTGTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS-3UTR GCA 90 bp ATCACAACACAGTCACTGAGCTATAGCAGACAGGCTCTGGAATTTGCATTGATGAGCTCTCACCACCTTTaGCCAGGGTGCACTGGCATC +
Preference number: 4 (lower is better)
Translates to: ITTQSLSYSRQALEFALMSSHHL*PGCTGI
Trigger: GATGCCAGTGCACCCTGGGCAAAGGTGGTGAGAGCT...CATCAATGCAAATTCCAGAGCCTGTCTGCTATAGCTCAGTGACTGTGTTGTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
CDS-3UTR GCA 90 bp CAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGTGCCATTGTTCAGCTaGAGCAGCCCGTTCAGCCCA +
Preference number: 4 (lower is better)
Translates to: QPLHIQWTKSDASYTENSVPLFS*SSPFSP
Trigger: TGGGCTGAACGGGCTGCTGCAGCTGAACAATGGCAC...AGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR GCA 90 bp CTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGGGCCTGTCACTGGGGTaGCATTGTTCAGCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: LHIQWTKSDASYTENSAGGLSLG*HCSAAA
Trigger: TGCTGCAGCTGAACAATGGCACCCCAGTGACAGGCC...CCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR GCA 90 bp ATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGTCGGTTTGTCCCTGTTaGTCTAACCAACCAGTAAGC +
Preference number: 4 (lower is better)
Translates to: MDKVRCFLHREFCWVSSWSVCPC*SNQPVS
Trigger: GCTTACTGGTTGGTTAGAGCAACAGGGACAAACCGA...CCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
CDS-3UTR GCA 90 bp CAGAAGGAAGAAGTCCTGTTTCTCTGGTTCTCACCCAGATGCTCAGACCATCCTCATCACAGATTCCACTaGTGCATTCCCCCACATCAG +
Preference number: 4 (lower is better)
Translates to: QKEEVLFLWFSPRCSDHPHHRFH*CIPPHQ
Trigger: CTGATGTGGGGGAATGCAGCAGTGGAATCTGTGATG...AGGATGGTCTGAGCATCTGGGTGAGAACCAGAGAAACAGGACTTCTTCCTTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322350.10
CDS-3UTR GCA 90 bp ATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGTGGACAGGAAGTCTTTaGTGCCTGTGTCATAGCTGT +
Preference number: 4 (lower is better)
Translates to: MDKVRCFLHREFCWVSSWWTGSL*CLCHSC
Trigger: ACAGCTATGACACAGGCAGCAAAGACTTCCTGTCCA...CCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR GCA 90 bp TCTCTGGCAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGACCGGAGGTGAAGTCATaGTTCACATGGATGGTTCGG +
Preference number: 4 (lower is better)
Translates to: SLAAATYSMDKVRCFLHRPEVKS*FTWMVR
Trigger: CCGAACCATCCATGTGAAGCATGACTTCACCTCCGG...TCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTGCCAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR GCA 90 bp TCTGGCAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAAAGGCCACCCAGGGATaGCTGTCTTGGTTCTCAGTT +
Preference number: 4 (lower is better)
Translates to: SGSRYIFNGQSPMLPTQRKATQG*LSWFSV
Trigger: AACTGAGAACCAAGACAGGCATCCCTGGGTGGCCTT...TCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTGCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR GCA 90 bp CTGGCTGTAAGCTGCTATGCTCACACGATATTCAGTGCCTGGTTTCAAATCTCCCTGCAGCTTTGGTCCTaGGTCATGGTTCTGTCCAAG +
Preference number: 4 (lower is better)
Translates to: LAVSCYAHTIFSAWFQISLQLWS*VMVLSK
Trigger: CTTGGACAGAACCATGACGCAGGACCAAAGCTGCAG...GGAGATTTGAAACCAGGCACTGAATATCGTGTGAGCATAGCAGCTTACAGCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504709.1
CDS-3UTR GCA 90 bp ACTGCTCCTGCAGGGATTTATCTGCGCCAACCTCAGAGTAAAAGACAGTGTACCGGATCTTCTGTTTCCTaGAGCTTTGGTCCTGCGTCA +
Preference number: 4 (lower is better)
Translates to: TAPAGIYLRQPQSKRQCTGSSVS*SFGPAS
Trigger: TGACGCAGGACCAAAGCTGCAGGAAACAGAAGATCC...GGTACACTGTCTTTTACTCTGAGGTTGGCGCAGATAAATCCCTGCAGGAGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504709.1
CDS-3UTR CCA 90 bp TGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGACTTGGCATTTTCCACTaGATGCTGAAAGCCGTACAG +
Preference number: 4 (lower is better)
Translates to: WTKSDASYTENSAGSARGLGIFH*MLKAVQ
Trigger: CTGTACGGCTTTCAGCATCCAGTGGAAAATGCCAAG...TCCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS-3UTR CCA 90 bp TTCACTCGCTCCAGGTTTCCAAGACAGGGCCACCTCAGAATCCGAAACCACAATCTTGGCATTTTCCACTaGATGCTGAAAGCCGTACAG +
Preference number: 4 (lower is better)
Translates to: FTRSRFPRQGHLRIRNHNLGIFH*MLKAVQ
Trigger: CTGTACGGCTTTCAGCATCCAGTGGAAAATGCCAAG...ATTGTGGTTTCGGATTCTGAGGTGGCCCTGTCTTGGAAACCTGGAGCGAGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504709.1
CDS-3UTR CCA 90 bp GGCCACCCAGGGATGCCTGTCTTGGTTCTCAGTTTCTCATCAGTGTGTACTTTCATCTGGATCCGCTCATaGATTGAGGTCCACTTCTTG +
Preference number: 4 (lower is better)
Translates to: GHPGMPVLVLSFSSVCTFIWIRS*IEVHFL
Trigger: CAAGAAGTGGACCTCAATCCATGAGCGGATCCAGAT...GAAAGTACACACTGATGAGAAACTGAGAACCAAGACAGGCATCCCTGGGTGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS-3UTR CCA 90 bp TTGGTGAGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGTTTGGTAGCAGGAAGTaGTTTAACCTCCTCAAAGGA +
Preference number: 4 (lower is better)
Translates to: LVRGNTPGPWASAYSIRQFGSRK*FNLLKG
Trigger: TCCTTTGAGGAGGTTAAACCACTTCCTGCTACCAAA...CTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCTCACCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
CDS-3UTR CCA 90 bp CTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTTCTCTGTATGGGAATaGGCTGGGGAGCCACCGTGG +
Preference number: 4 (lower is better)
Translates to: LHIQWTKSDASYTENSAGFSVWE*AGEPPW
Trigger: CCACGGTGGCTCCCCAGCCCATTCCCATACAGAGAA...CCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
CDS-3UTR CCA 90 bp CAGGCTCTGGAATTTGCATTGATGTGTGATCTCTGGCAGCCGCTACATATTCAATCCCCTTTCTCTGTATaGGAATGGGCTGGGGAGCCA +
Preference number: 4 (lower is better)
Translates to: QALEFALMCDLWQPLHIQSPFSV*EWAGEP
Trigger: TGGCTCCCCAGCCCATTCCCATACAGAGAAAGGGGA...TTGAATATGTAGCGGCTGCCAGAGATCACACATCAATGCAAATTCCAGAGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
CDS-3UTR CCA 90 bp TGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGAAGAGCCTTGACATTATaGCCACACCATTCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: WTKSDASYTENSAGSARGRALTL*PHHSSP
Trigger: AGGGGAAGAATGGTGTGGCCATAATGTCAAGGCTCT...TCCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
CDS-3UTR CCA 90 bp CAGGCTCTGGAATTTGCATTGATGTGTGATCTCTGGCAGCCGCTACATATTCAACCAACCAGTAAGCGCTaGGAGCGCCACCAAGATAGA +
Preference number: 4 (lower is better)
Translates to: QALEFALMCDLWQPLHIQPTSKR*ERHQDR
Trigger: TCTATCTTGGTGGCGCTCCCAGCGCTTACTGGTTGG...TTGAATATGTAGCGGCTGCCAGAGATCACACATCAATGCAAATTCCAGAGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
CDS-3UTR CCA 90 bp TACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTATGCTGGGGCTCCAGTaGCCAGGGAGTTGCAGCGTA +
Preference number: 4 (lower is better)
Translates to: YIFNGQSPMLPTQRILLGMLGLQ*PGSCSV
Trigger: TACGCTGCAACTCCCTGGCCACTGGAGCCCCAGCAT...ACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR CCA 90 bp AATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGTTCAGGATGATCTTCTaGATGCTCCCGCTGAAAGGC +
Preference number: 4 (lower is better)
Translates to: NGQSPMLPTQRILLGQLVFRMIF*MLPLKG
Trigger: GCCTTTCAGCGGGAGCATCCAGAAGATCATCCTGAA...CACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR CCA 90 bp CTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGGCTCTCACACAGGGGTaGGCCGCATTCTCCACATTC +
Preference number: 4 (lower is better)
Translates to: LHIQWTKSDASYTENSAGALTQG*AAFSTF
Trigger: GAATGTGGAGAATGCGGCCCACCCCTGTGTGAGAGC...CCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR CCA 90 bp CCAGCCAGTGAGGAGTGGAAGGGGTTAATCCGAACAATCCAAGGGCCAATGTGGCCTCTTCAAGATATCTaGGTTGTCATACGTCAGGTA +
Preference number: 4 (lower is better)
Translates to: PASEEWKGLIRTIQGPMWPLQDI*VVIRQV
Trigger: TACCTGACGTATGACAACCCAGATATCTTGAAGAGG...CCACATTGGCCCTTGGATTGTTCGGATTAACCCCTTCCACTCCTCACTGGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR CCA 90 bp TTGGTGAGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGCCTCTTCAAGATATCTaGGTTGTCATACGTCAGGTA +
Preference number: 4 (lower is better)
Translates to: LVRGNTPGPWASAYSIRQPLQDI*VVIRQV
Trigger: TACCTGACGTATGACAACCCAGATATCTTGAAGAGG...CTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCTCACCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
ENST00000506135.5
CDS-3UTR CCA 90 bp GGCCACCCAGGGATGCCTGTCTTGGTTCTCAGTTTCTCATCAGTGTGTACTTTCGTTATCTTTCCTGACTaGCCATCCCTAACGGCCTTA +
Preference number: 4 (lower is better)
Translates to: GHPGMPVLVLSFSSVCTFVIFPD*PSLTAL
Trigger: TAAGGCCGTTAGGGATGGCCAGTCAGGAAAGATAAC...GAAAGTACACACTGATGAGAAACTGAGAACCAAGACAGGCATCCCTGGGTGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR CCA 90 bp TCTGGCAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAGGGATTTGCCTGTTCTaGCTCCATAGTCATCCACGG +
Preference number: 4 (lower is better)
Translates to: SGSRYIFNGQSPMLPTQRGICLF*LHSHPR
Trigger: CCGTGGATGACTATGGAGCCAGAACAGGCAAATCCC...TCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTGCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR CCA 90 bp TCTCTGGCAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGGGATTTGCCTGTTCTaGCTCCATAGTCATCCACGG +
Preference number: 4 (lower is better)
Translates to: SLAAATYSMDKVRCFLHRGICLF*LHSHPR
Trigger: CCGTGGATGACTATGGAGCCAGAACAGGCAAATCCC...TCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTGCCAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR CCA 90 bp CAGAAGGAAGAAGTCCTGTTTCTCTGGTTCTCACCCAGATGCTCAGACCATCCTTTGGACAAGGCCAGCTaGTGTTACTTGGCTCCACAA +
Preference number: 4 (lower is better)
Translates to: QKEEVLFLWFSPRCSDHPLDKAS*CYLAPQ
Trigger: TTGTGGAGCCAAGTAACACCAGCTGGCCTTGTCCAA...AGGATGGTCTGAGCATCTGGGTGAGAACCAGAGAAACAGGACTTCTTCCTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322350.10
CDS-3UTR CCA 90 bp GCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCGAAGGCTCTGTCCCTTaGACAAGGCCAGCTGGTGTT +
Preference number: 4 (lower is better)
Translates to: AATYSMDKVRCFLHREFCEGSVP*TRPAGV
Trigger: AACACCAGCTGGCCTTGTCCAAGGGACAGAGCCTTC...GCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR CCA 90 bp ACATTCGAGGTAAGCTCTGGGGAAGGGGGCCGCATTATGATTATGATTCTGTGTAACACACCTGGTCCCTaGGCCTCTGCATATAGCATC +
Preference number: 4 (lower is better)
Translates to: TFEVSSGEGGRIMIMILCNTPGP*ASAYSI
Trigger: GATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTT...ACACAGAATCATAATCATAATGCGGCCCCCTTCCCCAGAGCTTACCTCGAATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322350.10
CDS-3UTR CCA 90 bp TCTGGCAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGACACAGAGAATTCTGCTaGGTCAGCTCGTGGAGTGTC +
Preference number: 4 (lower is better)
Translates to: SGSRYIFNGQSPMLPTQRHREFC*VSSWSV
Trigger: GACACTCCACGAGCTGACCCAGCAGAATTCTCTGTG...TCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTGCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR CCA 90 bp GGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGAGCCGCTACATATTCAATaGACAAAGTCCGATGCTTCC +
Preference number: 4 (lower is better)
Translates to: GQSPMLPTQRILLGQLVEPLHIQ*TKSDAS
Trigger: GGAAGCATCGGACTTTGTCCATTGAATATGTAGCGG...CTCCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR CCA 90 bp GTGAGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTTTTAATAGTGCCCTGTaGGATTCTTTCTCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: VRGNTPGPWASAYSIRQGFNSAL*DSFSLS
Trigger: AGAGAGAGAGAAAGAATCCCACAGGGCACTATTAAA...ACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR CCA 90 bp GATCTCTGGCAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACACCAGCCAGTGAGGAGTaGAAGGGGTTAATCCGAACA +
Preference number: 4 (lower is better)
Translates to: DLWQPLHIQWTKSDASYTPASEE*KGLIRT
Trigger: TGTTCGGATTAACCCCTTCCACTCCTCACTGGCTGG...TGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTGCCAGAGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR CCA 90 bp GTAAGCTGCTATGCTCACACGATATTCAGTGCCTGGTTTCAAATCTCCAATCACCCTCCAACACCTTCCTaGTTTTCGGATGGCCGCTCG +
Preference number: 4 (lower is better)
Translates to: VSCYAHTIFSAWFQISNHPPTPS*FSDGRS
Trigger: CGAGCGGCCATCCGAAAACCAGGAAGGTGTTGGAGG...GTGATTGGAGATTTGAAACCAGGCACTGAATATCGTGTGAGCATAGCAGCTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504709.1
CDS-3UTR CCA 90 bp CAAGAGGAGGCCCTACCTTGCCTGTTCCAGTTGGACTGGTTGCCTTTTCTATCTATCCCTCTCCTGGATTaGATCTTCTGTTTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: QEEALPCLFQLDWLPFLSIPLLD*IFCFLQ
Trigger: CTGCAGGAAACAGAAGATCCAATCCAGGAGAGGGAT...AGATAGAAAAGGCAACCAGTCCAACTGGAACAGGCAAGGTAGGGCCTCCTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504709.1
CDS-3UTR TCA 90 bp TCTCTGGCAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGATCCGCTCATGGATTaGGGTCCACTTCTTGTCGAA +
Preference number: 4 (lower is better)
Translates to: SLAAATYSMDKVRCFLHRDPLMD*GPLLVE
Trigger: TTCGACAAGAAGTGGACCTCAATCCATGAGCGGATC...TCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTGCCAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS-3UTR TCA 90 bp TGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGACATGTCAAAGAGCCTTaGCATTATGGCCACACCATT +
Preference number: 4 (lower is better)
Translates to: WTKSDASYTENSAGSARGHVKEP*HYGHTI
Trigger: AATGGTGTGGCCATAATGTCAAGGCTCTTTGACATG...TCCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
CDS-3UTR TCA 90 bp CTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGGACTGCACACAGCCTTaGAAGCCTCGGTTTGTCCCT +
Preference number: 4 (lower is better)
Translates to: LHIQWTKSDASYTENSAGDCTQP*KPRFVP
Trigger: AGGGACAAACCGAGGCTTTCAAGGCTGTGTGCAGTC...CCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
CDS-3UTR TCA 90 bp TCTGGCAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGACATTCACTCCGGAGGTaGAGTCATGCTTCACATGGA +
Preference number: 4 (lower is better)
Translates to: SGSRYIFNGQSPMLPTQRHSLRR*SHASHG
Trigger: TCCATGTGAAGCATGACTTCACCTCCGGAGTGAATG...TCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTGCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR TCA 90 bp CAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTATCGCTTTCTGGCAGTaGAGCCCCTCAAAGCCCAAG +
Preference number: 4 (lower is better)
Translates to: QPLHIQWTKSDASYTENSIAFWQ*SPSKPK
Trigger: CTTGGGCTTTGAGGGGCTTCACTGCCAGAAAGCGAT...AGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000397202.6
CDS-3UTR TCA 90 bp AGAGTCATCCACCCAAACTTCCAAAAGTATACTGTGTGGACAATCTGCAGCTATTGCCCAGGTTATAGCTaGACACGAGGGCTCCATCCC +
Preference number: 4 (lower is better)
Translates to: RVIHPNFQKYTVWTICSYCPGYS*TRGLHP
Trigger: GGGATGGAGCCCTCGTGTTCAGCTATAACCTGGGCA...ATAGCTGCAGATTGTCCACACAGTATACTTTTGGAAGTTTGGGTGGATGACTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322350.10
CDS-3UTR TCA 90 bp ATCACAACACAGTCACTGAGCTATAGCAGACAGGCTCTGGAATTTGCATTGATGAGGAGCCATTCACCATaGTGGATGCCACACCACTGC +
Preference number: 4 (lower is better)
Translates to: ITTQSLSYSRQALEFALMRSHSP*WMPHHC
Trigger: GCAGTGGTGTGGCATCCATCATGGTGAATGGCTCCT...CATCAATGCAAATTCCAGAGCCTGTCTGCTATAGCTCAGTGACTGTGTTGTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR TCA 90 bp CAGGCTCTGGAATTTGCATTGATGTGTGATCTCTGGCAGCCGCTACATATTCAAAATCGGTGGACAGGGTaGAGTGAGAGATACAGCCCA +
Preference number: 4 (lower is better)
Translates to: QALEFALMCDLWQPLHIQNRWTG*SERYSP
Trigger: TGGGCTGTATCTCTCACTTCACCCTGTCCACCGATT...TTGAATATGTAGCGGCTGCCAGAGATCACACATCAATGCAAATTCCAGAGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR TCA 90 bp TCTGGCAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGATGGCTCCACAAGTGTTaGTGTTTTTCCCATCCACGG +
Preference number: 4 (lower is better)
Translates to: SGSRYIFNGQSPMLPTQRWLHKC*CFSHPR
Trigger: CCGTGGATGGGAAAAACATCAACACTTGTGGAGCCA...TCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTGCCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR GCA 90 bp CAACCTCAGAGTAAAAGACAGTGTACCCAAGGATGGGACTTCCAGGATGCCTTGAGCCTGGCTGTAAGCTaGTATGCTCACACGATATTC +
Preference number: 4 (lower is better)
Translates to: QPQSKRQCTQGWDFQDALSLAVS*YAHTIF
Trigger: GAATATCGTGTGAGCATAGCAGCTTACAGCCAGGCT...CAAGGCATCCTGGAAGTCCCATCCTTGGGTACACTGTCTTTTACTCTGAGGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504709.1
CDS-3UTR GCA 90 bp TGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGACAATTAAACCTGAACTaGAGGGAGCGTCGGATGATA +
Preference number: 4 (lower is better)
Translates to: WTKSDASYTENSAGSARGQLNLN*RERRMI
Trigger: TATCATCCGACGCTCCCTGCAGTTCAGGTTTAATTG...TCCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
CDS-3UTR GCA 90 bp TACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTGTGCCATTGTTCAGCTaGAGCAGCCCGTTCAGCCCA +
Preference number: 4 (lower is better)
Translates to: YIFNGQSPMLPTQRILLGVPLFS*SSPFSP
Trigger: TGGGCTGAACGGGCTGCTGCAGCTGAACAATGGCAC...ACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR GCA 90 bp ATCACAACACAGTCACTGAGCTATAGCAGACAGGCTCTGGAATTTGCATTGATGCACAGATTCCACTGCTaGATTCCCCCACATCAGCCC +
Preference number: 4 (lower is better)
Translates to: ITTQSLSYSRQALEFALMHRFHC*IPPHQP
Trigger: GGGCTGATGTGGGGGAATGCAGCAGTGGAATCTGTG...CATCAATGCAAATTCCAGAGCCTGTCTGCTATAGCTCAGTGACTGTGTTGTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
CDS-3UTR GCA 90 bp TACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCTCCACGTGGCCCCCTaGCAAGTTGATGGACAGGAA +
Preference number: 4 (lower is better)
Translates to: YIFNGQSPMLPTQRILLGLHVAP*QVDGQE
Trigger: TTCCTGTCCATCAACTTGGCAGGGGGCCACGTGGAG...ACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR GCA 90 bp CAGGCTCTGGAATTTGCATTGATGTGTGATCTCTGGCAGCCGCTACATATTCAACCGGAGGTGAAGTCATaGTTCACATGGATGGTTCGG +
Preference number: 4 (lower is better)
Translates to: QALEFALMCDLWQPLHIQPEVKS*FTWMVR
Trigger: CCGAACCATCCATGTGAAGCATGACTTCACCTCCGG...TTGAATATGTAGCGGCTGCCAGAGATCACACATCAATGCAAATTCCAGAGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR GCA 90 bp GCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCCTGCGGCCGATAAACTaGGGGATCTCAATGGCTTCT +
Preference number: 4 (lower is better)
Translates to: AATYSMDKVRCFLHREFCLRPIN*GISMAS
Trigger: AGAAGCCATTGAGATCCCGCAGTTTATCGGCCGCAG...GCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR GCA 90 bp TCTGGCAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGACCATTGATGTTAAGCTaGCGCATCATGCCTGGGGAT +
Preference number: 4 (lower is better)
Translates to: SGSRYIFNGQSPMLPTQRPLMLS*RIMPGD
Trigger: ATCCCCAGGCATGATGCGGCAGCTTAACATCAATGG...TCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTGCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR GCA 90 bp ACATTCGAGGTAAGCTCTGGGGAAGGGGGCCGCATTATGATTATGATTCTGTGTCTACACAGAGAATTCTaGTGGGTCAGCTCGTGGAGT +
Preference number: 4 (lower is better)
Translates to: TFEVSSGEGGRIMIMILCLHREF*WVSSWS
Trigger: ACTCCACGAGCTGACCCAGCAGAATTCTCTGTGTAG...ACACAGAATCATAATCATAATGCGGCCCCCTTCCCCAGAGCTTACCTCGAATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322350.10
CDS-3UTR GCA 90 bp TCTGGCAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGACTACACAGAGAATTCTaGTGGGTCAGCTCGTGGAGT +
Preference number: 4 (lower is better)
Translates to: SGSRYIFNGQSPMLPTQRLHREF*WVSSWS
Trigger: ACTCCACGAGCTGACCCAGCAGAATTCTCTGTGTAG...TCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTGCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR GCA 90 bp TGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGAGTCACACAGTCATTCTaGTGTCAGGAAGAGTGTCAT +
Preference number: 4 (lower is better)
Translates to: WTKSDASYTENSAGSARGVTQSF*CQEECH
Trigger: ATGACACTCTTCCTGACAGCAGAATGACTGTGTGAC...TCCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR GCA 90 bp CTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTATCCGTGCTCCATATaGTCCCTGCCCCATGGTCTG +
Preference number: 4 (lower is better)
Translates to: LHIQWTKSDASYTENSAGYPCSI*SLPHGL
Trigger: CAGACCATGGGGCAGGGAGCATATGGAGCACGGATA...CCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336740.10
ENST00000397202.6
CDS-3UTR GCA 90 bp CAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTCTCAAGCCACCTGCATaGAGCGTATCTGTGTGCCAG +
Preference number: 4 (lower is better)
Translates to: QPLHIQWTKSDASYTENSLKPPA*SVSVCQ
Trigger: CTGGCACACAGATACGCTGCATGCAGGTGGCTTGAG...AGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336740.10
ENST00000397202.6
CDS-3UTR CCA 90 bp ACAGCCTTGGGAACACTGATTGTATTAGTGTCCATTGGTATGAACCTGACCTCCGGCAGGCAGGAATCTTaGGACAAAGTGGTGACATGC +
Preference number: 4 (lower is better)
Translates to: TALGTLIVLVSIGMNLTSGRQES*DKVVTC
Trigger: GCATGTCACCACTTTGTCCCAAGATTCCTGCCTGCC...GGAGGTCAGGTTCATACCAATGGACACTAATACAATCAGTGTTCCCAAGGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322350.10
CDS-3UTR CCA 90 bp GGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGAGCTTCTTGTCGAAATCTaGCCTGATGAATTCCACAGA +
Preference number: 4 (lower is better)
Translates to: GQSPMLPTQRILLGQLVELLVEI*PDEFHR
Trigger: TCTGTGGAATTCATCAGGCCAGATTTCGACAAGAAG...CTCCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS-3UTR CCA 90 bp AATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGCTGGTAGTTGGTATCTaGATCGAGGCCCTTGATAAC +
Preference number: 4 (lower is better)
Translates to: NGQSPMLPTQRILLGQLVLVVGI*IEALDN
Trigger: GTTATCAAGGGCCTCGATCCAGATACCAACTACCAG...CACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS-3UTR CCA 90 bp TACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTTTCTCTGTATGGGAATaGGCTGGGGAGCCACCGTGG +
Preference number: 4 (lower is better)
Translates to: YIFNGQSPMLPTQRILLGFSVWE*AGEPPW
Trigger: CCACGGTGGCTCCCCAGCCCATTCCCATACAGAGAA...ACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
CDS-3UTR CCA 90 bp TTCAGAGTCATCCACCCAAACTTCCAAAAGTATACTGTGTGGACAATCTGCAGCCCAACCAGTAAGCGCTaGGAGCGCCACCAAGATAGA +
Preference number: 4 (lower is better)
Translates to: FRVIHPNFQKYTVWTICSPTSKR*ERHQDR
Trigger: TCTATCTTGGTGGCGCTCCCAGCGCTTACTGGTTGG...GCTGCAGATTGTCCACACAGTATACTTTTGGAAGTTTGGGTGGATGACTCTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322350.10
CDS-3UTR CCA 90 bp TACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTAAGCGGAACTCCACGTaGCCCCCTGCCAAGTTGATG +
Preference number: 4 (lower is better)
Translates to: YIFNGQSPMLPTQRILLGKRNST*PPAKLM
Trigger: CATCAACTTGGCAGGGGGCCACGTGGAGTTCCGCTT...ACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR CCA 90 bp GACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGAGTAAGTCATGCTTCACATaGATGGTTCGGTCATTCAGG +
Preference number: 4 (lower is better)
Translates to: DKVRCFLHREFCWVSSWSKSCFT*MVRSFR
Trigger: CCTGAATGACCGAACCATCCATGTGAAGCATGACTT...ACTCCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR CCA 90 bp TACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTGCTCTCACACAGGGGTaGGCCGCATTCTCCACATTC +
Preference number: 4 (lower is better)
Translates to: YIFNGQSPMLPTQRILLGALTQG*AAFSTF
Trigger: GAATGTGGAGAATGCGGCCCACCCCTGTGTGAGAGC...ACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR CCA 90 bp GCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCAACACACCTGGTCCCTaGGCCTCTGCATATAGCATC +
Preference number: 4 (lower is better)
Translates to: AATYSMDKVRCFLHREFCNTPGP*ASAYSI
Trigger: GATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTT...GCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR CCA 90 bp CAGGCTCTGGAATTTGCATTGATGTGTGATCTCTGGCAGCCGCTACATATTCAACACAGAGAATTCTGCTaGGTCAGCTCGTGGAGTGTC +
Preference number: 4 (lower is better)
Translates to: QALEFALMCDLWQPLHIQHREFC*VSSWSV
Trigger: GACACTCCACGAGCTGACCCAGCAGAATTCTCTGTG...TTGAATATGTAGCGGCTGCCAGAGATCACACATCAATGCAAATTCCAGAGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
3UTR CAA 72 bp TTGGTTCTCAGTTTCTCATCAGTGTGTACTTTCTTCTaGGTGAGAGGAAACACACCTGGTCCCTGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: LVLSFSSVCTFF*VRGNTPGPWAS
Trigger: AGAGGCCCAGGGACCAGGTGTGTTTCCTCTCACCAAGAAGAAAGTACACACTGATGAGAAACTGAGAACCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR TCA 90 bp CTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGCCCAGGTGTAGTCATTaGCACAGAAGCTGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: LHIQWTKSDASYTENSAGPRCSH*HRSCQQ
Trigger: CTGCTGACAGCTTCTGTGTCAATGACTACACCTGGG...CCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
CDS-3UTR TCA 90 bp GACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGAGTGATAACAATATCTTCTaGGCAGCTCTCACCACCTTT +
Preference number: 4 (lower is better)
Translates to: DKVRCFLHREFCWVSSWSDNNIF*AALTTF
Trigger: AAAGGTGGTGAGAGCTGCTCAGAAGATATTGTTATC...ACTCCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
CDS-3UTR TCA 90 bp CTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTGGTCTCACTTACGATaGTGGCAACCCCAGTTCCAC +
Preference number: 4 (lower is better)
Translates to: LHIQWTKSDASYTENSAGWSHLR*WQPQFH
Trigger: GTGGAACTGGGGTTGCCATCATCGTAAGTGAGACCA...CCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR TCA 90 bp TCTCTGGCAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAATCTCAGAGACTCTCTaGACTGAGGAATGGTCAAGG +
Preference number: 4 (lower is better)
Translates to: SLAAATYSMDKVRCFLHRISETL*TEEWSR
Trigger: CCTTGACCATTCCTCAGTTCAGAGAGTCTCTGAGAT...TCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTGCCAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR TCA 90 bp ATCACAACACAGTCACTGAGCTATAGCAGACAGGCTCTGGAATTTGCATTGATGAATCGGTGGACAGGGTaGAGTGAGAGATACAGCCCA +
Preference number: 4 (lower is better)
Translates to: ITTQSLSYSRQALEFALMNRWTG*SERYSP
Trigger: TGGGCTGTATCTCTCACTTCACCCTGTCCACCGATT...CATCAATGCAAATTCCAGAGCCTGTCTGCTATAGCTCAGTGACTGTGTTGTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR TCA 90 bp CAGGCTCTGGAATTTGCATTGATGTGTGATCTCTGGCAGCCGCTACATATTCAATGGCTCCACAAGTGTTaGTGTTTTTCCCATCCACGG +
Preference number: 4 (lower is better)
Translates to: QALEFALMCDLWQPLHIQWLHKC*CFSHPR
Trigger: CCGTGGATGGGAAAAACATCAACACTTGTGGAGCCA...TTGAATATGTAGCGGCTGCCAGAGATCACACATCAATGCAAATTCCAGAGCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR TCA 90 bp TTCACATTCGAGGTAAGCTCTGGGGAAGGGGGCCGCATTATGATTATGATTCTGGTACTTTCTTCTTGGTaGGAGGAAACACACCTGGTC +
Preference number: 4 (lower is better)
Translates to: FTFEVSSGEGGRIMIMILVLSSW*EETHLV
Trigger: GACCAGGTGTGTTTCCTCTCACCAAGAAGAAAGTAC...CAGAATCATAATCATAATGCGGCCCCCTTCCCCAGAGCTTACCTCGAATGTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322350.10
CDS-3UTR TCA 90 bp TCTGGCAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAGTACTTTCTTCTTGGTaGGAGGAAACACACCTGGTC +
Preference number: 4 (lower is better)
Translates to: SGSRYIFNGQSPMLPTQRVLSSW*EETHLV
Trigger: GACCAGGTGTGTTTCCTCTCACCAAGAAGAAAGTAC...TCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTGCCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR TCA 90 bp GATCTCTGGCAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAATTTGCATTGATGTGTaGTCTCTGGCAGCCGCTACA +
Preference number: 4 (lower is better)
Translates to: DLWQPLHIQWTKSDASYTICIDV*SLAAAT
Trigger: TGTAGCGGCTGCCAGAGATCACACATCAATGCAAAT...TGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTGCCAGAGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR TCA 90 bp GCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTCACAACACAGTCACTaGGCTATAGCAGACAGGCTC +
Preference number: 4 (lower is better)
Translates to: AATYSMDKVRCFLHREFCSQHSH*AIADRL
Trigger: GAGCCTGTCTGCTATAGCTCAGTGACTGTGTTGTGA...GCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR TCA 90 bp ATCACAACACAGTCACTGAGCTATAGCAGACAGGCTCTGGAATTTGCATTGATGCACACAAAAGGCCCTTaGGGACAGCTCCTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: ITTQSLSYSRQALEFALMHTKGP*GQLLPL
Trigger: AAGAGGAAGGAGCTGTCCTCAAGGGCCTTTTGTGTG...CATCAATGCAAATTCCAGAGCCTGTCTGCTATAGCTCAGTGACTGTGTTGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336740.10
ENST00000397202.6
CDS-3UTR GCA 90 bp AGGCCCTACCTTGCCTGTTCCAGTTGGACTGGTTGCCTTTTCTATCTAGTAAATAGCCGTACAGTTCAATaGGCCCAGCTTGATGTCAAG +
Preference number: 4 (lower is better)
Translates to: RPYLACSSWTGCLFYLVNSRTVQ*AQLDVK
Trigger: CTTGACATCAAGCTGGGCGCATTGAACTGTACGGCT...ATTTACTAGATAGAAAAGGCAACCAGTCCAACTGGAACAGGCAAGGTAGGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504709.1
CDS-3UTR GCA 90 bp GATCTCTGGCAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACATCGGTTTGTCCCTGTTaGTCTAACCAACCAGTAAGC +
Preference number: 4 (lower is better)
Translates to: DLWQPLHIQWTKSDASYTSVCPC*SNQPVS
Trigger: GCTTACTGGTTGGTTAGAGCAACAGGGACAAACCGA...TGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTGCCAGAGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
CDS-3UTR GCA 90 bp CTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGCAGTGGCCAGGGAGTTaGAGCGTAAGATCTCAGAGA +
Preference number: 4 (lower is better)
Translates to: LHIQWTKSDASYTENSAGQWPGS*SVRSQR
Trigger: TCTCTGAGATCTTACGCTGCAACTCCCTGGCCACTG...CCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR GCA 90 bp AATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGACAGGAAGTCTTTGCTaGCTGTGTCATAGCTGTACA +
Preference number: 4 (lower is better)
Translates to: NGQSPMLPTQRILLGQLVTGSLC*LCHSCT
Trigger: TGTACAGCTATGACACAGGCAGCAAAGACTTCCTGT...CACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR GCA 90 bp TTCATATTCATCCTCTTGAGCCGTCAACATTTACCAAAAGAGAATGGTCAGCTCGATACACGAAGCTCGTaGCAGTTGCCCAGGGTGAGG +
Preference number: 4 (lower is better)
Translates to: FIFILLSRQHLPKENGQLDTRSS*QLPRVR
Trigger: CCTCACCCTGGGCAACTGGCACGAGCTTCGTGTATC...GAGCTGACCATTCTCTTTTGGTAAATGTTGACGGCTCAAGAGGATGAATATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322350.10
CDS-3UTR GCA 90 bp GACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGAGTCCCTCCACTATCTTCTaGTTATCCACCTGTAAGATT +
Preference number: 4 (lower is better)
Translates to: DKVRCFLHREFCWVSSWSPSTIF*LSTCKI
Trigger: AATCTTACAGGTGGATAAGCAGAAGATAGTGGAGGG...ACTCCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR GCA 90 bp CTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGCTGCGGCCGATAAACTaGGGGATCTCAATGGCTTCT +
Preference number: 4 (lower is better)
Translates to: LHIQWTKSDASYTENSAGLRPIN*GISMAS
Trigger: AGAAGCCATTGAGATCCCGCAGTTTATCGGCCGCAG...CCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR GCA 90 bp ATCACAACACAGTCACTGAGCTATAGCAGACAGGCTCTGGAATTTGCATTGATGCTGCGGCCGATAAACTaGGGGATCTCAATGGCTTCT +
Preference number: 4 (lower is better)
Translates to: ITTQSLSYSRQALEFALMLRPIN*GISMAS
Trigger: AGAAGCCATTGAGATCCCGCAGTTTATCGGCCGCAG...CATCAATGCAAATTCCAGAGCCTGTCTGCTATAGCTCAGTGACTGTGTTGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR GCA 90 bp CAGGCTCTGGAATTTGCATTGATGTGTGATCTCTGGCAGCCGCTACATATTCAATCATGCCTGGGGATTTaGCTGTTCTGGCTCCATAGT +
Preference number: 4 (lower is better)
Translates to: QALEFALMCDLWQPLHIQSCLGI*LFWLHS
Trigger: ACTATGGAGCCAGAACAGGCAAATCCCCAGGCATGA...TTGAATATGTAGCGGCTGCCAGAGATCACACATCAATGCAAATTCCAGAGCCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR GCA 90 bp AATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGAGCCCTCTCATATATTaGCTGTTAGTGTGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: NGQSPMLPTQRILLGQLVSPLIY*LLVCRA
Trigger: TGCTCTGCACACTAACAGGCAATATATGAGAGGGCT...CACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR GCA 90 bp CAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTAAGGCCACCCAGGGATaGCTGTCTTGGTTCTCAGTT +
Preference number: 4 (lower is better)
Translates to: QPLHIQWTKSDASYTENSKATQG*LSWFSV
Trigger: AACTGAGAACCAAGACAGGCATCCCTGGGTGGCCTT...AGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR GCA 90 bp CAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGTCAGCTCCCCAAGTTaGCCACCCAAGTTACCTATC +
Preference number: 4 (lower is better)
Translates to: QPLHIQWTKSDASYTENSVSSPS*PPKLPI
Trigger: GATAGGTAACTTGGGTGGGCAACTTGGGGAGCTGAC...AGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322350.10
CDS-3UTR GCA 90 bp ATCACAACACAGTCACTGAGCTATAGCAGACAGGCTCTGGAATTTGCATTGATGTGGTTCTCACCCAGATaGTCAGACCATCCTGACAGC +
Preference number: 4 (lower is better)
Translates to: ITTQSLSYSRQALEFALMWFSPR*SDHPDS
Trigger: GCTGTCAGGATGGTCTGAGCATCTGGGTGAGAACCA...CATCAATGCAAATTCCAGAGCCTGTCTGCTATAGCTCAGTGACTGTGTTGTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322350.10
CDS-3UTR GCA 90 bp GCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCCTGGGGTCATGTGCTTaGATAGTAAAGGGACACAGC +
Preference number: 4 (lower is better)
Translates to: AATYSMDKVRCFLHREFCLGSCA*IVKGHS
Trigger: GCTGTGTCCCTTTACTATGCAAGCACATGACCCCAG...GCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322350.10
CDS-3UTR GCA 90 bp TCTGGCAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAGTCTCTGGGGTCATGTaGTTGCATAGTAAAGGGACA +
Preference number: 4 (lower is better)
Translates to: SGSRYIFNGQSPMLPTQRVSGVM*LHSKGT
Trigger: TGTCCCTTTACTATGCAAGCACATGACCCCAGAGAC...TCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTGCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322350.10
CDS-3UTR GCA 90 bp TACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTTATCCGTGCTCCATATaGTCCCTGCCCCATGGTCTG +
Preference number: 4 (lower is better)
Translates to: YIFNGQSPMLPTQRILLGYPCSI*SLPHGL
Trigger: CAGACCATGGGGCAGGGAGCATATGGAGCACGGATA...ACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336740.10
ENST00000397202.6
CDS-3UTR GCA 90 bp GATCTCTGGCAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACACCCAATTACTCTGGTTaGAGATCACTTGAAGCCAGC +
Preference number: 4 (lower is better)
Translates to: DLWQPLHIQWTKSDASYTPNYSG*RSLEAS
Trigger: GCTGGCTTCAAGTGATCTGCAACCAGAGTAATTGGG...TGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTGCCAGAGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397210.7
CDS-3UTR CCA 90 bp ACATTCGAGGTAAGCTCTGGGGAAGGGGGCCGCATTATGATTATGATTCTGTGTACTTCCAGGATGCCTTaGCATTTTCCACTGGATGCT +
Preference number: 4 (lower is better)
Translates to: TFEVSSGEGGRIMIMILCTSRMP*HFPLDA
Trigger: AGCATCCAGTGGAAAATGCCAAGGCATCCTGGAAGT...ACACAGAATCATAATCATAATGCGGCCCCCTTCCCCAGAGCTTACCTCGAATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000322350.10
CDS-3UTR CCA 90 bp TTCCAAGACAGGGCCACCTCAGAATCCGAAACCACAATGACATGTGGCTGCTGGACGATATTCAGTGCCTaGTTTCAAATCTCCAATCAC +
Preference number: 4 (lower is better)
Translates to: FQDRATSESETTMTCGCWTIFSA*FQISNH
Trigger: GTGATTGGAGATTTGAAACCAGGCACTGAATATCGT...CCAGCAGCCACATGTCATTGTGGTTTCGGATTCTGAGGTGGCCCTGTCTTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504709.1
CDS-3UTR CCA 90 bp CAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTCGGCAAACTGGTAGTTaGTATCTGGATCGAGGCCCT +
Preference number: 4 (lower is better)
Translates to: QPLHIQWTKSDASYTENSRQTGS*YLDRGP
Trigger: AGGGCCTCGATCCAGATACCAACTACCAGTTTGCCG...AGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS-3UTR CCA 90 bp TACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTTCCCCTTTCTCTGTATaGGAATGGGCTGGGGAGCCA +
Preference number: 4 (lower is better)
Translates to: YIFNGQSPMLPTQRILLGSPFSV*EWAGEP
Trigger: TGGCTCCCCAGCCCATTCCCATACAGAGAAAGGGGA...ACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
CDS-3UTR CCA 90 bp TACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTAGACTGGCCTGTCACTaGGGTGCCATTGTTCAGCTG +
Preference number: 4 (lower is better)
Translates to: YIFNGQSPMLPTQRILLGRLACH*GAIVQL
Trigger: CAGCTGAACAATGGCACCCCAGTGACAGGCCAGTCT...ACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR CCA 90 bp GGCCACCCAGGGATGCCTGTCTTGGTTCTCAGTTTCTCATCAGTGTGTACTTTCCCTCTTCAAGATATCTaGGTTGTCATACGTCAGGTA +
Preference number: 4 (lower is better)
Translates to: GHPGMPVLVLSFSSVCTFPLQDI*VVIRQV
Trigger: TACCTGACGTATGACAACCCAGATATCTTGAAGAGG...GAAAGTACACACTGATGAGAAACTGAGAACCAAGACAGGCATCCCTGGGTGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR CCA 90 bp TCTCTGGCAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGTTATCTTTCCTGACTaGCCATCCCTAACGGCCTTA +
Preference number: 4 (lower is better)
Translates to: SLAAATYSMDKVRCFLHRVIFPD*PSLTAL
Trigger: TAAGGCCGTTAGGGATGGCCAGTCAGGAAAGATAAC...TCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTGCCAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR CCA 90 bp CTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGCACAGAGAATTCTGCTaGGTCAGCTCGTGGAGTGTC +
Preference number: 4 (lower is better)
Translates to: LHIQWTKSDASYTENSAGHREFC*VSSWSV
Trigger: GACACTCCACGAGCTGACCCAGCAGAATTCTCTGTG...CCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR CCA 90 bp AATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGCCGCTACATATTCAATaGACAAAGTCCGATGCTTCC +
Preference number: 4 (lower is better)
Translates to: NGQSPMLPTQRILLGQLVPLHIQ*TKSDAS
Trigger: GGAAGCATCGGACTTTGTCCATTGAATATGTAGCGG...CACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR CCA 90 bp GGCCACCCAGGGATGCCTGTCTTGGTTCTCAGTTTCTCATCAGTGTGTACTTTCTTGATGTGTGATCTCTaGCAGCCGCTACATATTCAA +
Preference number: 4 (lower is better)
Translates to: GHPGMPVLVLSFSSVCTFLMCDL*QPLHIQ
Trigger: TTGAATATGTAGCGGCTGCCAGAGATCACACATCAA...GAAAGTACACACTGATGAGAAACTGAGAACCAAGACAGGCATCCCTGGGTGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR CCA 90 bp ATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGTTGATGTGTGATCTCTaGCAGCCGCTACATATTCAA +
Preference number: 4 (lower is better)
Translates to: MDKVRCFLHREFCWVSSWLMCDL*QPLHIQ
Trigger: TTGAATATGTAGCGGCTGCCAGAGATCACACATCAA...CCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR CCA 90 bp TTCAGAGTCATCCACCCAAACTTCCAAAAGTATACTGTGTGGACAATCTGCAGCCCAGCCAGTGAGGAGTaGAAGGGGTTAATCCGAACA +
Preference number: 4 (lower is better)
Translates to: FRVIHPNFQKYTVWTICSPASEE*KGLIRT
Trigger: TGTTCGGATTAACCCCTTCCACTCCTCACTGGCTGG...GCTGCAGATTGTCCACACAGTATACTTTTGGAAGTTTGGGTGGATGACTCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322350.10
CDS-3UTR CCA 90 bp CTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGCCAGCCAGTGAGGAGTaGAAGGGGTTAATCCGAACA +
Preference number: 4 (lower is better)
Translates to: LHIQWTKSDASYTENSAGPASEE*KGLIRT
Trigger: TGTTCGGATTAACCCCTTCCACTCCTCACTGGCTGG...CCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR CCA 90 bp CAGAAGGAAGAAGTCCTGTTTCTCTGGTTCTCACCCAGATGCTCAGACCATCCTACAGCTACAAAATCATaGGGGCTCAGCTCCTTAACT +
Preference number: 4 (lower is better)
Translates to: QKEEVLFLWFSPRCSDHPTATKS*GLSSLT
Trigger: AGTTAAGGAGCTGAGCCCCCATGATTTTGTAGCTGT...AGGATGGTCTGAGCATCTGGGTGAGAACCAGAGAAACAGGACTTCTTCCTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322350.10
CDS-3UTR CCA 90 bp AGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGCAAAAGTATACTGTGTaGACAATCTGCAGCTATAAA +
Preference number: 4 (lower is better)
Translates to: RGNTPGPWASAYSIRQGLQKYTV*TICSYK
Trigger: TTTATAGCTGCAGATTGTCCACACAGTATACTTTTG...CAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322350.10
CDS-3UTR CCA 90 bp ACATTCGAGGTAAGCTCTGGGGAAGGGGGCCGCATTATGATTATGATTCTGTGTGAAGTCCTGTTTCTCTaGTTCTCACCCAGATGCTCA +
Preference number: 4 (lower is better)
Translates to: TFEVSSGEGGRIMIMILCEVLFL*FSPRCS
Trigger: TGAGCATCTGGGTGAGAACCAGAGAAACAGGACTTC...ACACAGAATCATAATCATAATGCGGCCCCCTTCCCCAGAGCTTACCTCGAATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322350.10
CDS-3UTR CCA 90 bp AAGAGGAGGCCCTACCTTGCCTGTTCCAGTTGGACTGGTTGCCTTTTCTATCTATTTGGTCCTGCGTCATaGTTCTGTCCAAGTTTTCGT +
Preference number: 4 (lower is better)
Translates to: KRRPYLACSSWTGCLFYLFGPAS*FCPSFR
Trigger: ACGAAAACTTGGACAGAACCATGACGCAGGACCAAA...TAGATAGAAAAGGCAACCAGTCCAACTGGAACAGGCAAGGTAGGGCCTCCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504709.1
CDS-3UTR TCA 90 bp CAGGCTCTGGAATTTGCATTGATGTGTGATCTCTGGCAGCCGCTACATATTCAAGCCAACCCCCTAGTTTaGTTTTGGTCTCACTTACGA +
Preference number: 4 (lower is better)
Translates to: QALEFALMCDLWQPLHIQANPLV*FWSHLR
Trigger: TCGTAAGTGAGACCAAAATCAAACTAGGGGGTTGGC...TTGAATATGTAGCGGCTGCCAGAGATCACACATCAATGCAAATTCCAGAGCCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR TCA 90 bp CAGGCTCTGGAATTTGCATTGATGTGTGATCTCTGGCAGCCGCTACATATTCAAGAGGAATGGTCAAGGTaGAAGCATCTTCACAGTGTC +
Preference number: 4 (lower is better)
Translates to: QALEFALMCDLWQPLHIQEEWSR*KHLHSV
Trigger: GACACTGTGAAGATGCTTTCACCTTGACCATTCCTC...TTGAATATGTAGCGGCTGCCAGAGATCACACATCAATGCAAATTCCAGAGCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR TCA 90 bp TCTCTGGCAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAAGAGACTCTCTGAACTaGGGAATGGTCAAGGTGAAA +
Preference number: 4 (lower is better)
Translates to: SLAAATYSMDKVRCFLHRRDSLN*GMVKVK
Trigger: TTTCACCTTGACCATTCCTCAGTTCAGAGAGTCTCT...TCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTGCCAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR TCA 90 bp ATCACAACACAGTCACTGAGCTATAGCAGACAGGCTCTGGAATTTGCATTGATGTGGGGACTCCGCCAATaGAAATGTCTGTGTTGCACT +
Preference number: 4 (lower is better)
Translates to: ITTQSLSYSRQALEFALMWGLRQ*KCLCCT
Trigger: AGTGCAACACAGACATTTTCATTGGCGGAGTCCCCA...CATCAATGCAAATTCCAGAGCCTGTCTGCTATAGCTCAGTGACTGTGTTGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR TCA 90 bp CTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTGGCTCCACAAGTGTTaGTGTTTTTCCCATCCACGG +
Preference number: 4 (lower is better)
Translates to: LHIQWTKSDASYTENSAGWLHKC*CFSHPR
Trigger: CCGTGGATGGGAAAAACATCAACACTTGTGGAGCCA...CCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR TCA 90 bp GCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCATTTGCATTGATGTGTaGTCTCTGGCAGCCGCTACA +
Preference number: 4 (lower is better)
Translates to: AATYSMDKVRCFLHREFCICIDV*SLAAAT
Trigger: TGTAGCGGCTGCCAGAGATCACACATCAATGCAAAT...GCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR TCA 90 bp CAGGCTCTGGAATTTGCATTGATGTGTGATCTCTGGCAGCCGCTACATATTCAAATTTGCATTGATGTGTaGTCTCTGGCAGCCGCTACA +
Preference number: 4 (lower is better)
Translates to: QALEFALMCDLWQPLHIQICIDV*SLAAAT
Trigger: TGTAGCGGCTGCCAGAGATCACACATCAATGCAAAT...TTGAATATGTAGCGGCTGCCAGAGATCACACATCAATGCAAATTCCAGAGCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR TCA 90 bp CTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCACAACACAGTCACTaGGCTATAGCAGACAGGCTC +
Preference number: 4 (lower is better)
Translates to: LHIQWTKSDASYTENSAGSQHSH*AIADRL
Trigger: GAGCCTGTCTGCTATAGCTCAGTGACTGTGTTGTGA...CCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR TCA 90 bp CAGGCTCTGGAATTTGCATTGATGTGTGATCTCTGGCAGCCGCTACATATTCAAACCTATCCATTCCACTaGCACCACAAAAGGCCCAAA +
Preference number: 4 (lower is better)
Translates to: QALEFALMCDLWQPLHIQTYPFH*HHKRPK
Trigger: TTTGGGCCTTTTGTGGTGTCAGTGGAATGGATAGGT...TTGAATATGTAGCGGCTGCCAGAGATCACACATCAATGCAAATTCCAGAGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322350.10
CDS-3UTR GCA 90 bp CAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTAGCCGTACAGTTCAATaGGCCCAGCTTGATGTCAAG +
Preference number: 4 (lower is better)
Translates to: QPLHIQWTKSDASYTENSSRTVQ*AQLDVK
Trigger: CTTGACATCAAGCTGGGCGCATTGAACTGTACGGCT...AGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS-3UTR GCA 90 bp GATCTCTGGCAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACACTGCAGGGATTTATCTaGGCCAACCTCAGAGTAAAA +
Preference number: 4 (lower is better)
Translates to: DLWQPLHIQWTKSDASYTLQGFI*ANLRVK
Trigger: TTTTACTCTGAGGTTGGCGCAGATAAATCCCTGCAG...TGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTGCCAGAGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS-3UTR GCA 90 bp TCTTATATCCCTCTCCTGGATTGGATCTTCTGTTTCCTGCAGCTTTGGTCCTGCCTGCAGGGATTTATCTaGGCCAACCTCAGAGTAAAA +
Preference number: 4 (lower is better)
Translates to: SYIPLLDWIFCFLQLWSCLQGFI*ANLRVK
Trigger: TTTTACTCTGAGGTTGGCGCAGATAAATCCCTGCAG...GCAGGACCAAAGCTGCAGGAAACAGAAGATCCAATCCAGGAGAGGGATATAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504709.1
CDS-3UTR GCA 90 bp TACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTGGCACGCTGTGCAACTaGTCCTGCAGGGATTTATCT +
Preference number: 4 (lower is better)
Translates to: YIFNGQSPMLPTQRILLGGTLCN*SCRDLS
Trigger: AGATAAATCCCTGCAGGAGCAGTTGCACAGCGTGCC...ACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS-3UTR GCA 90 bp GGCATTTTCCACTGGATGCTGAAAGCCGTACAGTTCAATGCGCCCAGCTTGATGTCACACGATATTCAGTaGCTGGTTTCAAATCTCCAA +
Preference number: 4 (lower is better)
Translates to: GIFHWMLKAVQFNAPSLMSHDIQ*LVSNLQ
Trigger: TTGGAGATTTGAAACCAGGCACTGAATATCGTGTGA...CATCAAGCTGGGCGCATTGAACTGTACGGCTTTCAGCATCCAGTGGAAAATGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504709.1
CDS-3UTR GCA 90 bp AAGCTTCATATTCATCCTCTTGAGCCGTCAACATTTACCAAAAGAGAATGGTCAACAATGACATGTGGCTaGTGGGGAGCTGCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: KLHIHPLEPSTFTKREWSTMTCG*WGAAGG
Trigger: GCCTCCTGCAGCTCCCCAGCAGCCACATGTCATTGT...TGACCATTCTCTTTTGGTAAATGTTGACGGCTCAAGAGGATGAATATGAAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322350.10
CDS-3UTR GCA 90 bp TACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGTGGCCAGGGAGTTaGAGCGTAAGATCTCAGAGA +
Preference number: 4 (lower is better)
Translates to: YIFNGQSPMLPTQRILLGQWPGS*SVRSQR
Trigger: TCTCTGAGATCTTACGCTGCAACTCCCTGGCCACTG...ACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR GCA 90 bp GCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGACAGGAAGTCTTTaGTGCCTGTGTCATAGCTGT +
Preference number: 4 (lower is better)
Translates to: AATYSMDKVRCFLHREFCWTGSL*CLCHSC
Trigger: ACAGCTATGACACAGGCAGCAAAGACTTCCTGTCCA...GCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR GCA 90 bp TACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCCGGAGGTGAAGTCATaGTTCACATGGATGGTTCGG +
Preference number: 4 (lower is better)
Translates to: YIFNGQSPMLPTQRILLGPEVKS*FTWMVR
Trigger: CCGAACCATCCATGTGAAGCATGACTTCACCTCCGG...ACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR GCA 90 bp CTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGATTCACCATGATGGATaGCACACCACTGCCCAGGTT +
Preference number: 4 (lower is better)
Translates to: LHIQWTKSDASYTENSAGIHHDG*HTTAQV
Trigger: AACCTGGGCAGTGGTGTGGCATCCATCATGGTGAAT...CCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR GCA 90 bp ATCACAACACAGTCACTGAGCTATAGCAGACAGGCTCTGGAATTTGCATTGATGTCATGCCTGGGGATTTaGCTGTTCTGGCTCCATAGT +
Preference number: 4 (lower is better)
Translates to: ITTQSLSYSRQALEFALMSCLGI*LFWLHS
Trigger: ACTATGGAGCCAGAACAGGCAAATCCCCAGGCATGA...CATCAATGCAAATTCCAGAGCCTGTCTGCTATAGCTCAGTGACTGTGTTGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR GCA 90 bp GGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGAGTATTGCCTGTTAGTGTaGAGAGCAATTTCCTTCATT +
Preference number: 4 (lower is better)
Translates to: GQSPMLPTQRILLGQLVEYCLLV*RAISFI
Trigger: AATGAAGGAAATTGCTCTGCACACTAACAGGCAATA...CTCCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR GCA 90 bp ATCACAACACAGTCACTGAGCTATAGCAGACAGGCTCTGGAATTTGCATTGATGCTACACAGAGAATTCTaGTGGGTCAGCTCGTGGAGT +
Preference number: 4 (lower is better)
Translates to: ITTQSLSYSRQALEFALMLHREF*WVSSWS
Trigger: ACTCCACGAGCTGACCCAGCAGAATTCTCTGTGTAG...CATCAATGCAAATTCCAGAGCCTGTCTGCTATAGCTCAGTGACTGTGTTGTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR GCA 90 bp TGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGAATGTGCTTAAAACTGTaGCTTGCACAAACCCCAAAA +
Preference number: 4 (lower is better)
Translates to: WTKSDASYTENSAGSARGMCLKL*LAQTPK
Trigger: TTTTGGGGTTTGTGCAAGGCACAGTTTTAAGCACAT...TCCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322350.10
CDS-3UTR GCA 90 bp AATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGACAATTAAACCTGGATaGATGTTCTCTCAAGCCACC +
Preference number: 4 (lower is better)
Translates to: NGQSPMLPTQRILLGQLVTIKPG*MFSQAT
Trigger: GGTGGCTTGAGAGAACATGCATCCAGGTTTAATTGT...CACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397202.6
CDS-3UTR CCA 90 bp TGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGAACGATATTCAGTGCCTaGTTTCAAATCTCCAATCAC +
Preference number: 4 (lower is better)
Translates to: WTKSDASYTENSAGSARGTIFSA*FQISNH
Trigger: GTGATTGGAGATTTGAAACCAGGCACTGAATATCGT...TCCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS-3UTR CCA 90 bp CAGAAGGAAGAAGTCCTGTTTCTCTGGTTCTCACCCAGATGCTCAGACCATCCTTTTGGTAGCAGGAAGTaGTTTAACCTCCTCAAAGGA +
Preference number: 4 (lower is better)
Translates to: QKEEVLFLWFSPRCSDHPFGSRK*FNLLKG
Trigger: TCCTTTGAGGAGGTTAAACCACTTCCTGCTACCAAA...AGGATGGTCTGAGCATCTGGGTGAGAACCAGAGAAACAGGACTTCTTCCTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322350.10
CDS-3UTR CCA 90 bp AATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGTTTGGTAGCAGGAAGTaGTTTAACCTCCTCAAAGGA +
Preference number: 4 (lower is better)
Translates to: NGQSPMLPTQRILLGQLVFGSRK*FNLLKG
Trigger: TCCTTTGAGGAGGTTAAACCACTTCCTGCTACCAAA...CACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
CDS-3UTR CCA 90 bp CTTATCTTGGAAAGCTTCATATTCATCCTCTTGAGCCGTCAACATTTACCAAAAATGCTGGGGCTCCAGTaGCCAGGGAGTTGCAGCGTA +
Preference number: 4 (lower is better)
Translates to: LILESFIFILLSRQHLPKMLGLQ*PGSCSV
Trigger: TACGCTGCAACTCCCTGGCCACTGGAGCCCCAGCAT...TTTTGGTAAATGTTGACGGCTCAAGAGGATGAATATGAAGCTTTCCAAGATAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322350.10
CDS-3UTR CCA 90 bp AATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGCCTCTTCAAGATATCTaGGTTGTCATACGTCAGGTA +
Preference number: 4 (lower is better)
Translates to: NGQSPMLPTQRILLGQLVPLQDI*VVIRQV
Trigger: TACCTGACGTATGACAACCCAGATATCTTGAAGAGG...CACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR CCA 90 bp GCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCGTTATCTTTCCTGACTaGCCATCCCTAACGGCCTTA +
Preference number: 4 (lower is better)
Translates to: AATYSMDKVRCFLHREFCVIFPD*PSLTAL
Trigger: TAAGGCCGTTAGGGATGGCCAGTCAGGAAAGATAAC...GCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR CCA 90 bp TACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTAACACACCTGGTCCCTaGGCCTCTGCATATAGCATC +
Preference number: 4 (lower is better)
Translates to: YIFNGQSPMLPTQRILLGNTPGP*ASAYSI
Trigger: GATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTT...ACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR CCA 90 bp TACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCACAGAGAATTCTGCTaGGTCAGCTCGTGGAGTGTC +
Preference number: 4 (lower is better)
Translates to: YIFNGQSPMLPTQRILLGHREFC*VSSWSV
Trigger: GACACTCCACGAGCTGACCCAGCAGAATTCTCTGTG...ACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR CCA 90 bp GATCTCTGGCAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACACCGCTACATATTCAATaGACAAAGTCCGATGCTTCC +
Preference number: 4 (lower is better)
Translates to: DLWQPLHIQWTKSDASYTPLHIQ*TKSDAS
Trigger: GGAAGCATCGGACTTTGTCCATTGAATATGTAGCGG...TGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTGCCAGAGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR CCA 90 bp TACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCCAGCCAGTGAGGAGTaGAAGGGGTTAATCCGAACA +
Preference number: 4 (lower is better)
Translates to: YIFNGQSPMLPTQRILLGPASEE*KGLIRT
Trigger: TGTTCGGATTAACCCCTTCCACTCCTCACTGGCTGG...ACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR CCA 90 bp TCTCTGGCAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGATTAGTAAGTCCATCATaGGGATCTGCCAGTGAACCA +
Preference number: 4 (lower is better)
Translates to: SLAAATYSMDKVRCFLHRLVSPS*GSASEP
Trigger: TGGTTCACTGGCAGATCCCCATGATGGACTTACTAA...TCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTGCCAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322350.10
CDS-3UTR TCA 90 bp AAGCTTCATATTCATCCTCTTGAGCCGTCAACATTTACCAAAAGAGAATGGTCACAGCTCCCATGTCGGTaGTATAACGGGGTCCATAGC +
Preference number: 4 (lower is better)
Translates to: KLHIHPLEPSTFTKREWSQLPCR*YNGVHS
Trigger: GCTATGGACCCCGTTATATCACCGACATGGGAGCTG...TGACCATTCTCTTTTGGTAAATGTTGACGGCTCAAGAGGATGAATATGAAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322350.10
CDS-3UTR TCA 90 bp GCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCCATGTCAAAGAGCCTTaGCATTATGGCCACACCATT +
Preference number: 4 (lower is better)
Translates to: AATYSMDKVRCFLHREFCHVKEP*HYGHTI
Trigger: AATGGTGTGGCCATAATGTCAAGGCTCTTTGACATG...GCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
CDS-3UTR TCA 90 bp CAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCCAACCCCCTAGTTTaGTTTTGGTCTCACTTACGA +
Preference number: 4 (lower is better)
Translates to: QPLHIQWTKSDASYTENSANPLV*FWSHLR
Trigger: TCGTAAGTGAGACCAAAATCAAACTAGGGGGTTGGC...AGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR TCA 90 bp CAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGAGGAATGGTCAAGGTaGAAGCATCTTCACAGTGTC +
Preference number: 4 (lower is better)
Translates to: QPLHIQWTKSDASYTENSEEWSR*KHLHSV
Trigger: GACACTGTGAAGATGCTTTCACCTTGACCATTCCTC...AGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR TCA 90 bp CAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTATCTCAGAGACTCTCTaGACTGAGGAATGGTCAAGG +
Preference number: 4 (lower is better)
Translates to: QPLHIQWTKSDASYTENSISETL*TEEWSR
Trigger: CCTTGACCATTCCTCAGTTCAGAGAGTCTCTGAGAT...AGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR TCA 90 bp CAGGCTCTGGAATTTGCATTGATGTGTGATCTCTGGCAGCCGCTACATATTCAACCAATGTGGGAAATGTaGAGTTCAAGGTCACACAGT +
Preference number: 4 (lower is better)
Translates to: QALEFALMCDLWQPLHIQPMWEM*SSRSHS
Trigger: ACTGTGTGACCTTGAACTTCACATTTCCCACATTGG...TTGAATATGTAGCGGCTGCCAGAGATCACACATCAATGCAAATTCCAGAGCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR TCA 90 bp ATCACAACACAGTCACTGAGCTATAGCAGACAGGCTCTGGAATTTGCATTGATGTGGTTGCAGATCACTTaGAGCCAGCCTTGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: ITTQSLSYSRQALEFALMWLQIT*SQPCFS
Trigger: AGAGAAACAAGGCTGGCTTCAAGTGATCTGCAACCA...CATCAATGCAAATTCCAGAGCCTGTCTGCTATAGCTCAGTGACTGTGTTGTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397210.7
CDS-3UTR GCA 90 bp TACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTGCCATGGGAATTCATTaGCCTCACGGCAAACTGGTA +
Preference number: 4 (lower is better)
Translates to: YIFNGQSPMLPTQRILLGAMGIH*PHGKLV
Trigger: TACCAGTTTGCCGTGAGGGCAATGAATTCCCATGGC...ACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS-3UTR GCA 90 bp AAGCTTCATATTCATCCTCTTGAGCCGTCAACATTTACCAAAAGAGAATGGTCAACGGCCTTAACTCGGTaGCACCGACCATCGTTGAAG +
Preference number: 4 (lower is better)
Translates to: KLHIHPLEPSTFTKREWSTALTR*HRPSLK
Trigger: CTTCAACGATGGTCGGTGGCACCGAGTTAAGGCCGT...TGACCATTCTCTTTTGGTAAATGTTGACGGCTCAAGAGGATGAATATGAAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322350.10
CDS-3UTR GCA 90 bp TACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCCATTGATGTTAAGCTaGCGCATCATGCCTGGGGAT +
Preference number: 4 (lower is better)
Translates to: YIFNGQSPMLPTQRILLGPLMLS*RIMPGD
Trigger: ATCCCCAGGCATGATGCGGCAGCTTAACATCAATGG...ACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR GCA 90 bp GACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGAGTTATTGCCTGTTAGTGTaGAGAGCAATTTCCTTCATT +
Preference number: 4 (lower is better)
Translates to: DKVRCFLHREFCWVSSWSYCLLV*RAISFI
Trigger: AATGAAGGAAATTGCTCTGCACACTAACAGGCAATA...ACTCCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR CCA 90 bp AATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGACGATATTCAGTGCCTaGTTTCAAATCTCCAATCAC +
Preference number: 4 (lower is better)
Translates to: NGQSPMLPTQRILLGQLVTIFSA*FQISNH
Trigger: GTGATTGGAGATTTGAAACCAGGCACTGAATATCGT...CACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS-3UTR CCA 90 bp CAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTATCTGGATCCGCTCATaGATTGAGGTCCACTTCTTG +
Preference number: 4 (lower is better)
Translates to: QPLHIQWTKSDASYTENSIWIRS*IEVHFL
Trigger: CAAGAAGTGGACCTCAATCCATGAGCGGATCCAGAT...AGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS-3UTR CCA 90 bp AGAGTCATCCACCCAAACTTCCAAAAGTATACTGTGTGGACAATCTGCAGCTATACCATGGAGTCCATCTaGATCCGCTCATGGATTGAG +
Preference number: 4 (lower is better)
Translates to: RVIHPNFQKYTVWTICSYTMESI*IRSWIE
Trigger: CTCAATCCATGAGCGGATCCAGATGGACTCCATGGT...ATAGCTGCAGATTGTCCACACAGTATACTTTTGGAAGTTTGGGTGGATGACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322350.10
CDS-3UTR CCA 90 bp ATCACAACACAGTCACTGAGCTATAGCAGACAGGCTCTGGAATTTGCATTGATGAGAGCCTTGACATTATaGCCACACCATTCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: ITTQSLSYSRQALEFALMRALTL*PHHSSP
Trigger: AGGGGAAGAATGGTGTGGCCATAATGTCAAGGCTCT...CATCAATGCAAATTCCAGAGCCTGTCTGCTATAGCTCAGTGACTGTGTTGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
CDS-3UTR CCA 90 bp TACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTTTCAGGATGATCTTCTaGATGCTCCCGCTGAAAGGC +
Preference number: 4 (lower is better)
Translates to: YIFNGQSPMLPTQRILLGFRMIF*MLPLKG
Trigger: GCCTTTCAGCGGGAGCATCCAGAAGATCATCCTGAA...ACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR CCA 90 bp GCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCAAGTCATGCTTCACATaGATGGTTCGGTCATTCAGG +
Preference number: 4 (lower is better)
Translates to: AATYSMDKVRCFLHREFCKSCFT*MVRSFR
Trigger: CCTGAATGACCGAACCATCCATGTGAAGCATGACTT...GCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR CCA 90 bp GATCTCTGGCAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACACCTCTTCAAGATATCTaGGTTGTCATACGTCAGGTA +
Preference number: 4 (lower is better)
Translates to: DLWQPLHIQWTKSDASYTPLQDI*VVIRQV
Trigger: TACCTGACGTATGACAACCCAGATATCTTGAAGAGG...TGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTGCCAGAGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR CCA 90 bp CTTATCTTGGAAAGCTTCATATTCATCCTCTTGAGCCGTCAACATTTACCAAAACTGCCGCATCATGCCTaGGGATTTGCCTGTTCTGGC +
Preference number: 4 (lower is better)
Translates to: LILESFIFILLSRQHLPKLPHHA*GFACSG
Trigger: GCCAGAACAGGCAAATCCCCAGGCATGATGCGGCAG...TTTTGGTAAATGTTGACGGCTCAAGAGGATGAATATGAAGCTTTCCAAGATAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322350.10
CDS-3UTR CCA 90 bp TCTCTGGCAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGATTGATGTGTGATCTCTaGCAGCCGCTACATATTCAA +
Preference number: 4 (lower is better)
Translates to: SLAAATYSMDKVRCFLHRLMCDL*QPLHIQ
Trigger: TTGAATATGTAGCGGCTGCCAGAGATCACACATCAA...TCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTGCCAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
3UTR CAA 72 bp TCACTGAGCTATAGCAGACAGGCTCTGGAATTTGCATaGATGTGTGATCTCTGGCAGCCGCTACATATTCAA +
Preference number: 4 (lower is better)
Translates to: SLSYSRQALEFA*MCDLWQPLHIQ
Trigger: TTGAATATGTAGCGGCTGCCAGAGATCACACATCAATGCAAATTCCAGAGCCTGTCTGCTATAGCTCAGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR TCA 90 bp CTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTTTTCCACTGGATGCTaGAAGCCGTACAGTTCAATG +
Preference number: 4 (lower is better)
Translates to: LHIQWTKSDASYTENSAGFSTGC*KPYSSM
Trigger: CATTGAACTGTACGGCTTTCAGCATCCAGTGGAAAA...CCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS-3UTR TCA 90 bp TACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTGAGGAATGGTCAAGGTaGAAGCATCTTCACAGTGTC +
Preference number: 4 (lower is better)
Translates to: YIFNGQSPMLPTQRILLGEEWSR*KHLHSV
Trigger: GACACTGTGAAGATGCTTTCACCTTGACCATTCCTC...ACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR TCA 90 bp TACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTATCTCAGAGACTCTCTaGACTGAGGAATGGTCAAGG +
Preference number: 4 (lower is better)
Translates to: YIFNGQSPMLPTQRILLGISETL*TEEWSR
Trigger: CCTTGACCATTCCTCAGTTCAGAGAGTCTCTGAGAT...ACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR TCA 90 bp ACAGCCTTGGGAACACTGATTGTATTAGTGTCCATTGGTATGAACCTGACCTCCCCCAAAAGTCTTTGCTaGATGAATGCTGCACAAACA +
Preference number: 4 (lower is better)
Translates to: TALGTLIVLVSIGMNLTSPKSLC*MNAAQT
Trigger: TGTTTGTGCAGCATTCATTCAGCAAAGACTTTTGGG...GGAGGTCAGGTTCATACCAATGGACACTAATACAATCAGTGTTCCCAAGGCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322350.10
CDS-3UTR GCA 90 bp ATCACAACACAGTCACTGAGCTATAGCAGACAGGCTCTGGAATTTGCATTGATGCTGCAGGGATTTATCTaGGCCAACCTCAGAGTAAAA +
Preference number: 4 (lower is better)
Translates to: ITTQSLSYSRQALEFALMLQGFI*ANLRVK
Trigger: TTTTACTCTGAGGTTGGCGCAGATAAATCCCTGCAG...CATCAATGCAAATTCCAGAGCCTGTCTGCTATAGCTCAGTGACTGTGTTGTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS-3UTR GCA 90 bp CACCCAAGTTACCTATCCATTCCACTGACACCACAAAAGGCCCAAACAAGTCTCTCACACGATATTCAGTaGCTGGTTTCAAATCTCCAA +
Preference number: 4 (lower is better)
Translates to: HPSYLSIPLTPQKAQTSLSHDIQ*LVSNLQ
Trigger: TTGGAGATTTGAAACCAGGCACTGAATATCGTGTGA...GAGACTTGTTTGGGCCTTTTGTGGTGTCAGTGGAATGGATAGGTAACTTGGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322350.10
CDS-3UTR GCA 90 bp TTCATATTCATCCTCTTGAGCCGTCAACATTTACCAAAAGAGAATGGTCAGCTCGCCATGGGAATTCATTaGCCTCACGGCAAACTGGTA +
Preference number: 4 (lower is better)
Translates to: FIFILLSRQHLPKENGQLAMGIH*PHGKLV
Trigger: TACCAGTTTGCCGTGAGGGCAATGAATTCCCATGGC...GAGCTGACCATTCTCTTTTGGTAAATGTTGACGGCTCAAGAGGATGAATATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322350.10
CDS-3UTR GCA 90 bp ATCACAACACAGTCACTGAGCTATAGCAGACAGGCTCTGGAATTTGCATTGATGCAATTAAACCTGAACTaGAGGGAGCGTCGGATGATA +
Preference number: 4 (lower is better)
Translates to: ITTQSLSYSRQALEFALMQLNLN*RERRMI
Trigger: TATCATCCGACGCTCCCTGCAGTTCAGGTTTAATTG...CATCAATGCAAATTCCAGAGCCTGTCTGCTATAGCTCAGTGACTGTGTTGTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
CDS-3UTR GCA 90 bp AAGCTTCATATTCATCCTCTTGAGCCGTCAACATTTACCAAAAGAGAATGGTCACTGCGGCCGATAAACTaGGGGATCTCAATGGCTTCT +
Preference number: 4 (lower is better)
Translates to: KLHIHPLEPSTFTKREWSLRPIN*GISMAS
Trigger: AGAAGCCATTGAGATCCCGCAGTTTATCGGCCGCAG...TGACCATTCTCTTTTGGTAAATGTTGACGGCTCAAGAGGATGAATATGAAGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322350.10
CDS-3UTR GCA 90 bp CAGAAGGAAGAAGTCCTGTTTCTCTGGTTCTCACCCAGATGCTCAGACCATCCTTATTGCCTGTTAGTGTaGAGAGCAATTTCCTTCATT +
Preference number: 4 (lower is better)
Translates to: QKEEVLFLWFSPRCSDHPYCLLV*RAISFI
Trigger: AATGAAGGAAATTGCTCTGCACACTAACAGGCAATA...AGGATGGTCTGAGCATCTGGGTGAGAACCAGAGAAACAGGACTTCTTCCTTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322350.10
CDS-3UTR GCA 90 bp ATCACAACACAGTCACTGAGCTATAGCAGACAGGCTCTGGAATTTGCATTGATGAGCCCTCTCATATATTaGCTGTTAGTGTGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: ITTQSLSYSRQALEFALMSPLIY*LLVCRA
Trigger: TGCTCTGCACACTAACAGGCAATATATGAGAGGGCT...CATCAATGCAAATTCCAGAGCCTGTCTGCTATAGCTCAGTGACTGTGTTGTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR GCA 90 bp CTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGAGCCCTCTCATATATTaGCTGTTAGTGTGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: LHIQWTKSDASYTENSAGSPLIY*LLVCRA
Trigger: TGCTCTGCACACTAACAGGCAATATATGAGAGGGCT...CCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR GCA 90 bp GCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCATGGACAAAGTCCGATaGTTCCTACACAGAGAATTC +
Preference number: 4 (lower is better)
Translates to: AATYSMDKVRCFLHREFCMDKVR*FLHREF
Trigger: GAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCAT...GCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR GCA 90 bp CTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGGTCACACAGTCATTCTaGTGTCAGGAAGAGTGTCAT +
Preference number: 4 (lower is better)
Translates to: LHIQWTKSDASYTENSAGVTQSF*CQEECH
Trigger: ATGACACTCTTCCTGACAGCAGAATGACTGTGTGAC...CCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR GCA 90 bp CAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTTGCAGCGTATCTGTGTaGCAGATGTCTTCACACAAA +
Preference number: 4 (lower is better)
Translates to: QPLHIQWTKSDASYTENSCSVSV*QMSSHK
Trigger: TTTGTGTGAAGACATCTGGCACACAGATACGCTGCA...AGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336740.10
ENST00000397202.6
CDS-3UTR CCA 90 bp AGAGTCGAGACTGGGACTAATTATAGGCTCTTGCATAAGTTAGATCATATTTCATCCCCTTTCTCTGTATaGGAATGGGCTGGGGAGCCA +
Preference number: 4 (lower is better)
Translates to: RVETGTNYRLLHKLDHISSPFSV*EWAGEP
Trigger: TGGCTCCCCAGCCCATTCCCATACAGAGAAAGGGGA...TGAAATATGATCTAACTTATGCAAGAGCCTATAATTAGTCCCAGTCTCGACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322350.10
CDS-3UTR CCA 90 bp ATCACAACACAGTCACTGAGCTATAGCAGACAGGCTCTGGAATTTGCATTGATGAAGTCATGCTTCACATaGATGGTTCGGTCATTCAGG +
Preference number: 4 (lower is better)
Translates to: ITTQSLSYSRQALEFALMKSCFT*MVRSFR
Trigger: CCTGAATGACCGAACCATCCATGTGAAGCATGACTT...CATCAATGCAAATTCCAGAGCCTGTCTGCTATAGCTCAGTGACTGTGTTGTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR CCA 90 bp CAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTCCGCTACATATTCAATaGACAAAGTCCGATGCTTCC +
Preference number: 4 (lower is better)
Translates to: QPLHIQWTKSDASYTENSPLHIQ*TKSDAS
Trigger: GGAAGCATCGGACTTTGTCCATTGAATATGTAGCGG...AGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR CCA 90 bp CTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTGTATTAGTGTCCATTaGTATGAACCTGACCTCCGC +
Preference number: 4 (lower is better)
Translates to: LHIQWTKSDASYTENSAGCISVH*YEPDLR
Trigger: GCGGAGGTCAGGTTCATACCAATGGACACTAATACA...CCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322350.10
CDS-3UTR GCA 90 bp CAGGCTCTGGAATTTGCATTGATGTGTGATCTCTGGCAGCCGCTACATATTCAATCACACGATATTCAGTaGCTGGTTTCAAATCTCCAA +
Preference number: 4 (lower is better)
Translates to: QALEFALMCDLWQPLHIQSHDIQ*LVSNLQ
Trigger: TTGGAGATTTGAAACCAGGCACTGAATATCGTGTGA...TTGAATATGTAGCGGCTGCCAGAGATCACACATCAATGCAAATTCCAGAGCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS-3UTR GCA 90 bp TACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAATTAAACCTGAACTaGAGGGAGCGTCGGATGATA +
Preference number: 4 (lower is better)
Translates to: YIFNGQSPMLPTQRILLGQLNLN*RERRMI
Trigger: TATCATCCGACGCTCCCTGCAGTTCAGGTTTAATTG...ACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
CDS-3UTR GCA 90 bp CTTATCTTGGAAAGCTTCATATTCATCCTCTTGAGCCGTCAACATTTACCAAAACAGTGGCCAGGGAGTTaGAGCGTAAGATCTCAGAGA +
Preference number: 4 (lower is better)
Translates to: LILESFIFILLSRQHLPKQWPGS*SVRSQR
Trigger: TCTCTGAGATCTTACGCTGCAACTCCCTGGCCACTG...TTTTGGTAAATGTTGACGGCTCAAGAGGATGAATATGAAGCTTTCCAAGATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322350.10
CDS-3UTR GCA 90 bp CAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTCCCTCCACTATCTTCTaGTTATCCACCTGTAAGATT +
Preference number: 4 (lower is better)
Translates to: QPLHIQWTKSDASYTENSPSTIF*LSTCKI
Trigger: AATCTTACAGGTGGATAAGCAGAAGATAGTGGAGGG...AGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR CCA 90 bp TACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTAAGTCATGCTTCACATaGATGGTTCGGTCATTCAGG +
Preference number: 4 (lower is better)
Translates to: YIFNGQSPMLPTQRILLGKSCFT*MVRSFR
Trigger: CCTGAATGACCGAACCATCCATGTGAAGCATGACTT...ACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR CCA 90 bp CTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGCCTCTTCAAGATATCTaGGTTGTCATACGTCAGGTA +
Preference number: 4 (lower is better)
Translates to: LHIQWTKSDASYTENSAGPLQDI*VVIRQV
Trigger: TACCTGACGTATGACAACCCAGATATCTTGAAGAGG...CCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR CCA 90 bp TTCATATTCATCCTCTTGAGCCGTCAACATTTACCAAAAGAGAATGGTCAGCTCGTTATCTTTCCTGACTaGCCATCCCTAACGGCCTTA +
Preference number: 4 (lower is better)
Translates to: FIFILLSRQHLPKENGQLVIFPD*PSLTAL
Trigger: TAAGGCCGTTAGGGATGGCCAGTCAGGAAAGATAAC...GAGCTGACCATTCTCTTTTGGTAAATGTTGACGGCTCAAGAGGATGAATATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322350.10
CDS-3UTR CCA 90 bp CAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTTTGATGTGTGATCTCTaGCAGCCGCTACATATTCAA +
Preference number: 4 (lower is better)
Translates to: QPLHIQWTKSDASYTENSLMCDL*QPLHIQ
Trigger: TTGAATATGTAGCGGCTGCCAGAGATCACACATCAA...AGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR GCA 90 bp GGCTGTAAGCTGCTATGCTCACACGATATTCAGTGCCTGGTTTCAAATCTCCAATCCAGTTGGACTGGTTaGCTTTTCTATCTAGTAAAT +
Preference number: 4 (lower is better)
Translates to: GCKLLCSHDIQCLVSNLQSSWTG*LFYLVN
Trigger: ATTTACTAGATAGAAAAGGCAACCAGTCCAACTGGA...TTGGAGATTTGAAACCAGGCACTGAATATCGTGTGAGCATAGCAGCTTACAGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504709.1
CDS-3UTR CCA 90 bp AGAGTCATCCACCCAAACTTCCAAAAGTATACTGTGTGGACAATCTGCAGCTATCTTCTTGTCGAAATCTaGCCTGATGAATTCCACAGA +
Preference number: 4 (lower is better)
Translates to: RVIHPNFQKYTVWTICSYLLVEI*PDEFHR
Trigger: TCTGTGGAATTCATCAGGCCAGATTTCGACAAGAAG...ATAGCTGCAGATTGTCCACACAGTATACTTTTGGAAGTTTGGGTGGATGACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322350.10
CDS-3UTR CCA 90 bp CTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTTTAATAGTGCCCTGTaGGATTCTTTCTCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: LHIQWTKSDASYTENSAGFNSAL*DSFSLS
Trigger: AGAGAGAGAGAAAGAATCCCACAGGGCACTATTAAA...CCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR CCA 90 bp GTAAGCTGCTATGCTCACACGATATTCAGTGCCTGGTTTCAAATCTCCAATCACTTCCCACTATTATTCTaGGGACTTCTTATATCCCTC +
Preference number: 4 (lower is better)
Translates to: VSCYAHTIFSAWFQISNHFPLLF*GLLISL
Trigger: GAGGGATATAAGAAGTCCCCAGAATAATAGTGGGAA...GTGATTGGAGATTTGAAACCAGGCACTGAATATCGTGTGAGCATAGCAGCTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504709.1
3UTR CAA 72 bp AAATGTAGAGTCGAGACTGGGACTAATTATAGGCTCTaGCATAAGTTAGATCATATTTCACCCCCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: KCRVETGTNYRL*HKLDHISPPPW
Trigger: CCAAGGAGGGGGTGAAATATGATCTAACTTATGCAAGAGCCTATAATTAGTCCCAGTCTCGACTCTACATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322350.10
CDS-3UTR GCA 90 bp ATCACAACACAGTCACTGAGCTATAGCAGACAGGCTCTGGAATTTGCATTGATGTATTGCCTGTTAGTGTaGAGAGCAATTTCCTTCATT +
Preference number: 4 (lower is better)
Translates to: ITTQSLSYSRQALEFALMYCLLV*RAISFI
Trigger: AATGAAGGAAATTGCTCTGCACACTAACAGGCAATA...CATCAATGCAAATTCCAGAGCCTGTCTGCTATAGCTCAGTGACTGTGTTGTGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR CCA 90 bp CTTATCTTGGAAAGCTTCATATTCATCCTCTTGAGCCGTCAACATTTACCAAAACTTGGCATTTTCCACTaGATGCTGAAAGCCGTACAG +
Preference number: 4 (lower is better)
Translates to: LILESFIFILLSRQHLPKLGIFH*MLKAVQ
Trigger: CTGTACGGCTTTCAGCATCCAGTGGAAAATGCCAAG...TTTTGGTAAATGTTGACGGCTCAAGAGGATGAATATGAAGCTTTCCAAGATAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322350.10
CDS-3UTR CCA 90 bp TACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTTTTAATAGTGCCCTGTaGGATTCTTTCTCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: YIFNGQSPMLPTQRILLGFNSAL*DSFSLS
Trigger: AGAGAGAGAGAAAGAATCCCACAGGGCACTATTAAA...ACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
3UTR CAA 72 bp ACCTCGGTAACACATGTTCCTTTTAATCTGCTTATCTaGGAAAGCTTCATATTCATCCTCTTGAGCCGTCAA +
Preference number: 4 (lower is better)
Translates to: TSVTHVPFNLLI*ESFIFILLSRQ
Trigger: TTGACGGCTCAAGAGGATGAATATGAAGCTTTCCAAGATAAGCAGATTAAAAGGAACATGTGTTACCGAGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322350.10
CDS-3UTR CCA 90 bp AAGCTTCATATTCATCCTCTTGAGCCGTCAACATTTACCAAAAGAGAATGGTCATTTAATAGTGCCCTGTaGGATTCTTTCTCTCTCTCT +
Preference number: 4 (lower is better)
Translates to: KLHIHPLEPSTFTKREWSFNSAL*DSFSLS
Trigger: AGAGAGAGAGAAAGAATCCCACAGGGCACTATTAAA...TGACCATTCTCTTTTGGTAAATGTTGACGGCTCAAGAGGATGAATATGAAGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322350.10
CDS-3UTR GCA 90 bp CTTATCTTGGAAAGCTTCATATTCATCCTCTTGAGCCGTCAACATTTACCAAAATTGCTGAATGAATGCTaGACAAACAAATGTAGAGTC +
Preference number: 4 (lower is better)
Translates to: LILESFIFILLSRQHLPKLLNEC*TNKCRV
Trigger: GACTCTACATTTGTTTGTGCAGCATTCATTCAGCAA...TTTTGGTAAATGTTGACGGCTCAAGAGGATGAATATGAAGCTTTCCAAGATAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322350.10
CDS GCA 90 bp ACACGGGTAGTTCCAAGAGGTAGGACTGCAGCCGGGAGGTCGGCGTaGGCGAGTGAAGCCGGCTGCAAGCTGCAGGGCTTTTCGCGGGGG +
Preference number: 5 (lower is better)
Translates to: TRVVPRGRTAAGRSA*ASEAGCKLQGFSRG
Trigger: CCCCCGCGAAAAGCCCTGCAGCTTGCAGCCGGCTTCACTCGCGCACGCCGACCTCCCGGCTGCAGTCCTACCTCTTGGAACTACCCGTGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000354891.7
CDS GCA 90 bp GATGTCACTGGGCCAGCTGCGGGGGCTGGGGCCATGGGAATTCATTaGCCTCACGGCAAACTGGTAGTTGGTATCTGGATCGAGGCCCTT +
Preference number: 5 (lower is better)
Translates to: DVTGPAAGAGAMGIH*PHGKLVVGIWIEAL
Trigger: AAGGGCCTCGATCCAGATACCAACTACCAGTTTGCCGTGAGGGCAATGAATTCCCATGGCCCCAGCCCCCGCAGCTGGCCCAGTGACATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS CCA 90 bp CTGAGGACACCGGTCCCAGAGCCACAGTCAAAGCGGAACTCCACGTaGCCCCCTGCCAAGTTGATGGACAGGAAGTCTTTGCTGCCTGTG +
Preference number: 5 (lower is better)
Translates to: LRTPVPEPQSKRNST*PPAKLMDRKSLLPV
Trigger: CACAGGCAGCAAAGACTTCCTGTCCATCAACTTGGCAGGGGGCCACGTGGAGTTCCGCTTTGACTGTGGCTCTGGGACCGGTGTCCTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS CCA 90 bp TGGTTCTGTCCAAGTTTTCGTGACAGTCATCCTCCAACACCTTCCTaGTTTTCGGATGGCCGCTCGGAGCGACACCGCGCCGGGTCCGAG +
Preference number: 5 (lower is better)
Translates to: WFCPSFRDSHPPTPS*FSDGRSERHRAGSE
Trigger: CTCGGACCCGGCGCGGTGTCGCTCCGAGCGGCCATCCGAAAACCAGGAAGGTGTTGGAGGATGACTGTCACGAAAACTTGGACAGAACCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504709.1
CDS-3UTR CAA 90 bp GGTCGGGATGTCCCGGCTGAGAGGCACGCTGTGCAACTGCTCCTGCAGGGATTTTTCAATGCGCCCAGCTaGATGTCAAGAGGAGGCCCT +
Preference number: 5 (lower is better)
Translates to: GRDVPAERHAVQLLLQGFFNAPS*MSRGGP
Trigger: AGGGCCTCCTCTTGACATCAAGCTGGGCGCATTGAA...AAATCCCTGCAGGAGCAGTTGCACAGCGTGCCTCTCAGCCGGGACATCCCGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504709.1
CDS-3UTR CAA 90 bp GTGAGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTGTCACTGGGGTGCCATaGTTCAGCTGCAGCAGCCCG +
Preference number: 5 (lower is better)
Translates to: VRGNTPGPWASAYSIRQGVTGVP*FSCSSP
Trigger: CGGGCTGCTGCAGCTGAACAATGGCACCCCAGTGAC...ACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR CAA 90 bp GTGAGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCGAAGCTCGTGCCAGTaGCCCAGGGTGAGGGGATCT +
Preference number: 5 (lower is better)
Translates to: VRGNTPGPWASAYSIRQGRSSCQ*PRVRGS
Trigger: AGATCCCCTCACCCTGGGCAACTGGCACGAGCTTCG...ACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR CAA 90 bp ACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGAGGGCCCCTTGCCACCGACCATCGTaGAAGGAGCCATTCACCATG +
Preference number: 5 (lower is better)
Translates to: TPGPWASAYSIRQGLRAPCHRPS*KEPFTM
Trigger: CATGGTGAATGGCTCCTTCAACGATGGTCGGTGGCA...AGGGGCCCTCAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
ENST00000506135.5
CDS-3UTR CAA 90 bp CCAGCCAGTGAGGAGTGGAAGGGGTTAATCCGAACAATCCAAGGGCCAATGTGGCGAAGCTCGTGCCAGTaGCCCAGGGTGAGGGGATCT +
Preference number: 5 (lower is better)
Translates to: PASEEWKGLIRTIQGPMWRSSCQ*PRVRGS
Trigger: AGATCCCCTCACCCTGGGCAACTGGCACGAGCTTCG...CCACATTGGCCCTTGGATTGTTCGGATTAACCCCTTCCACTCCTCACTGGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322350.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR CAA 90 bp ACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGAGGGCCCCTGAAATGAAGTCGCTGTaGGGTCTCATGGGGCTGTCT +
Preference number: 5 (lower is better)
Translates to: TPGPWASAYSIRQGLRAPEMKSL*GLMGLS
Trigger: AGACAGCCCCATGAGACCCAACAGCGACTTCATTTC...AGGGGCCCTCAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
ENST00000506135.5
CDS-3UTR CAA 90 bp AACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGAGGGCCTGCCACCGACCATCGTaGAAGGAGCCATTCACCATG +
Preference number: 5 (lower is better)
Translates to: NTPGPWASAYSIRQGLRACHRPS*KEPFTM
Trigger: CATGGTGAATGGCTCCTTCAACGATGGTCGGTGGCA...GGCCCTCAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
ENST00000506135.5
CDS-3UTR CAA 90 bp CTGAATAGGGGCGCTTCCTTCACTCGCTCCAGGTTTCCAAGACAGGGCCACCTCAGAGGAGGCCCTACCTaGCCTGTTCCAGTTGGACTG +
Preference number: 5 (lower is better)
Translates to: LNRGASFTRSRFPRQGHLRGGPT*PVPVGL
Trigger: CAGTCCAACTGGAACAGGCAAGGTAGGGCCTCCTCT...GAGGTGGCCCTGTCTTGGAAACCTGGAGCGAGTGAAGGAAGCGCCCCTATTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504709.1
CDS GCA 90 bp ACCGGTCCCAGAGCCACAGTCAAAGCGGAACTCCACGTGGCCCCCTaGCAAGTTGATGGACAGGAAGTCTTTGCTGCCTGTGTCATAGCT +
Preference number: 5 (lower is better)
Translates to: TGPRATVKAELHVAP*QVDGQEVFAACVIA
Trigger: AGCTATGACACAGGCAGCAAAGACTTCCTGTCCATCAACTTGGCAGGGGGCCACGTGGAGTTCCGCTTTGACTGTGGCTCTGGGACCGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS GCA 90 bp CAGATTCCACTGCTGCATTCCCCTGAGACTGGCCTGTCACTGGGGTaGCATTGTTCAGCTGCAGCAGCCCGTTCAGCCCATCTCTGTAGA +
Preference number: 5 (lower is better)
Translates to: QIPLLHSPETGLSLG*HCSAAAARSAHLCR
Trigger: TCTACAGAGATGGGCTGAACGGGCTGCTGCAGCTGAACAATGGCACCCCAGTGACAGGCCAGTCTCAGGGGAATGCAGCAGTGGAATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397202.6
CDS-3UTR CAA 90 bp AACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGAGGGCCTCTGGATCGAGGCCCTaGATAACCATGGAGTCCATC +
Preference number: 5 (lower is better)
Translates to: NTPGPWASAYSIRQGLRASGSRP*ITMESI
Trigger: GATGGACTCCATGGTTATCAAGGGCCTCGATCCAGA...GGCCCTCAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS-3UTR CAA 90 bp AGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGCCAGTGGCCAGGGAGTaGCAGCGTAAGATCTCAGAG +
Preference number: 5 (lower is better)
Translates to: RGNTPGPWASAYSIRQGLPVARE*QRKISE
Trigger: CTCTGAGATCTTACGCTGCAACTCCCTGGCCACTGG...CAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR CAA 90 bp AACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGAGGGCCGCCAGCTGGTGTTACTaGGCTCCACAAGTGTTGATG +
Preference number: 5 (lower is better)
Translates to: NTPGPWASAYSIRQGLRAASWCY*APQVLM
Trigger: CATCAACACTTGTGGAGCCAAGTAACACCAGCTGGC...GGCCCTCAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
ENST00000506135.5
CDS-3UTR CAA 90 bp ACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGAGGGCCCCTCTGGTTGCAGATCACTaGAAGCCAGCCTTGTTTCTC +
Preference number: 5 (lower is better)
Translates to: TPGPWASAYSIRQGLRAPLVADH*KPALFL
Trigger: GAGAAACAAGGCTGGCTTCAAGTGATCTGCAACCAG...AGGGGCCCTCAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000397210.7
ENST00000506135.5
CDS TCA 90 bp AGTCGTCTTCAAATCCTTCATCATCCTCACCAGCTCCCATGTCGGTaGTATAACGGGGTCCATAGCGGCCACTTCCCGCCTCCTCAGGGC +
Preference number: 5 (lower is better)
Translates to: SRLQILHHPHQLPCR*YNGVHSGHFPPPQG
Trigger: GCCCTGAGGAGGCGGGAAGTGGCCGCTATGGACCCCGTTATATCACCGACATGGGAGCTGGTGAGGATGATGAAGGATTTGAAGACGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
CDS GCA 90 bp AGCGAGCGACTGCACACAGCCTTGAAAGCCTCGGTTTGTCCCTGTTaGTCTAACCAACCAGTAAGCGCTGGGAGCGCCACCAAGATAGAG +
Preference number: 5 (lower is better)
Translates to: SERLHTALKASVCPC*SNQPVSAGSATKIE
Trigger: CTCTATCTTGGTGGCGCTCCCAGCGCTTACTGGTTGGTTAGAGCAACAGGGACAAACCGAGGCTTTCAAGGCTGTGTGCAGTCGCTCGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
CDS GCA 90 bp TCGGTGCCACCGACCATCGTTGAAGGAGCCATTCACCATGATGGATaGCACACCACTGCCCAGGTTATAGCTGAACACGAGGGCTCCATC +
Preference number: 5 (lower is better)
Translates to: SVPPTIVEGAIHHDG*HTTAQVIAEHEGSI
Trigger: GATGGAGCCCTCGTGTTCAGCTATAACCTGGGCAGTGGTGTGGCATCCATCATGGTGAATGGCTCCTTCAACGATGGTCGGTGGCACCGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
ENST00000506135.5
ENST00000508131.5
ENST00000514476.1
CDS CCA 90 bp GATCTGCAATGTCTGAGAAAATCGCAAGGTGCTGCTGAAGGCAGATaGAGAGGGGGTTACCTGAACACGAGGGCTCCATCCCGAAGGCCC +
Preference number: 5 (lower is better)
Translates to: DLQCLRKSQGAAEGR*RGGYLNTRAPSRRP
Trigger: GGGCCTTCGGGATGGAGCCCTCGTGTTCAGGTAACCCCCTCTCCATCTGCCTTCAGCAGCACCTTGCGATTTTCTCAGACATTGCAGATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508868.5
CDS-3UTR CAA 90 bp GTGAGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTTTCAATGCGCCCAGCTaGATGTCAAGAGGAGGCCCT +
Preference number: 5 (lower is better)
Translates to: VRGNTPGPWASAYSIRQGFNAPS*MSRGGP
Trigger: AGGGCCTCCTCTTGACATCAAGCTGGGCGCATTGAA...ACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS-3UTR CAA 90 bp AGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGGGCCATGGGAATTCATaGCCCTCACGGCAAACTGGT +
Preference number: 5 (lower is better)
Translates to: RGNTPGPWASAYSIRQGLGHGNS*PSRQTG
Trigger: ACCAGTTTGCCGTGAGGGCAATGAATTCCCATGGCC...CAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS-3UTR CAA 90 bp GACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGAGTGTCACTGGGGTGCCATaGTTCAGCTGCAGCAGCCCG +
Preference number: 5 (lower is better)
Translates to: DKVRCFLHREFCWVSSWSVTGVP*FSCSSP
Trigger: CGGGCTGCTGCAGCTGAACAATGGCACCCCAGTGAC...ACTCCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR CAA 90 bp ACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGAGGGCCCCTTTGGCTCCACAAGTGTaGATGTTTTTCCCATCCACG +
Preference number: 5 (lower is better)
Translates to: TPGPWASAYSIRQGLRAPLAPQV*MFFPST
Trigger: CGTGGATGGGAAAAACATCAACACTTGTGGAGCCAA...AGGGGCCCTCAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
ENST00000506135.5
CDS-3UTR CAA 90 bp AACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGAGGGCCCTCTTGTCTCTATCTTaGTACAGCAAGCAGTCCCCC +
Preference number: 5 (lower is better)
Translates to: NTPGPWASAYSIRQGLRALLSLS*YSKQSP
Trigger: GGGGGACTGCTTGCTGTACAAAGATAGAGACAAGAG...GGCCCTCAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336740.10
ENST00000397202.6
CDS TCA 90 bp CAGAGCCACAGTCAAAGCGGAACTCCACGTGGCCCCCTGCCAAGTTaGTGGACAGGAAGTCTTTGCTGCCTGTGTCATAGCTGTACAGGA +
Preference number: 5 (lower is better)
Translates to: QSHSQSGTPRGPLPS*WTGSLCCLCHSCTG
Trigger: TCCTGTACAGCTATGACACAGGCAGCAAAGACTTCCTGTCCATCAACTTGGCAGGGGGCCACGTGGAGTTCCGCTTTGACTGTGGCTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR CAA 90 bp CCAGCCAGTGAGGAGTGGAAGGGGTTAATCCGAACAATCCAAGGGCCAATGTGGTGGCCCCCTGCCAAGTaGATGGACAGGAAGTCTTTG +
Preference number: 5 (lower is better)
Translates to: PASEEWKGLIRTIQGPMWWPPAK*MDRKSL
Trigger: CAAAGACTTCCTGTCCATCAACTTGGCAGGGGGCCA...CCACATTGGCCCTTGGATTGTTCGGATTAACCCCTTCCACTCCTCACTGGCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322350.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR CAA 90 bp GTGAGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTGAAATGAAGTCGCTGTaGGGTCTCATGGGGCTGTCT +
Preference number: 5 (lower is better)
Translates to: VRGNTPGPWASAYSIRQGEMKSL*GLMGLS
Trigger: AGACAGCCCCATGAGACCCAACAGCGACTTCATTTC...ACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
ENST00000506135.5
CDS-3UTR CAA 90 bp AACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGAGGGCCTTGGCTCCACAAGTGTaGATGTTTTTCCCATCCACG +
Preference number: 5 (lower is better)
Translates to: NTPGPWASAYSIRQGLRALAPQV*MFFPST
Trigger: CGTGGATGGGAAAAACATCAACACTTGTGGAGCCAA...GGCCCTCAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
ENST00000506135.5
CDS-3UTR CAA 90 bp GTGAGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTGCCAGCTGGTGTTACTaGGCTCCACAAGTGTTGATG +
Preference number: 5 (lower is better)
Translates to: VRGNTPGPWASAYSIRQGASWCY*APQVLM
Trigger: CATCAACACTTGTGGAGCCAAGTAACACCAGCTGGC...ACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
ENST00000506135.5
CDS-3UTR CAA 90 bp AACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGAGGGCCGCTCTGGAATTTGCATaGATGTGTGATCTCTGGCAG +
Preference number: 5 (lower is better)
Translates to: NTPGPWASAYSIRQGLRAALEFA*MCDLWQ
Trigger: CTGCCAGAGATCACACATCAATGCAAATTCCAGAGC...GGCCCTCAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS GCA 90 bp ACCTGTAAGATTCCATTCTTTGCTGTGCGAGATACACGAAGCTCGTaGCAGTTGCCCAGGGTGAGGGGATCTTCACTCCTGAGGACACCG +
Preference number: 5 (lower is better)
Translates to: TCKIPFFAVRDTRSS*QLPRVRGSSLLRTP
Trigger: CGGTGTCCTCAGGAGTGAAGATCCCCTCACCCTGGGCAACTGGCACGAGCTTCGTGTATCTCGCACAGCAAAGAATGGAATCTTACAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR CAA 90 bp GTAAGTCCATCATGGGGATCTGCCAGTGAACCAGCTGTCTCTGGGGTCATGTGCTCTGGATCGAGGCCCTaGATAACCATGGAGTCCATC +
Preference number: 5 (lower is better)
Translates to: VSPSWGSASEPAVSGVMCSGSRP*ITMESI
Trigger: GATGGACTCCATGGTTATCAAGGGCCTCGATCCAGA...GCACATGACCCCAGAGACAGCTGGTTCACTGGCAGATCCCCATGATGGACTTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322350.10
CDS-3UTR CAA 90 bp TCTCTGGCAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGTCACTGGGGTGCCATaGTTCAGCTGCAGCAGCCCG +
Preference number: 5 (lower is better)
Translates to: SLAAATYSMDKVRCFLHRVTGVP*FSCSSP
Trigger: CGGGCTGCTGCAGCTGAACAATGGCACCCCAGTGAC...TCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTGCCAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR CAA 90 bp AACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGAGGGCCAGTAATTTTACTGTATaGGCCCTGAGACTGGCCTGT +
Preference number: 5 (lower is better)
Translates to: NTPGPWASAYSIRQGLRASNFTV*ALRLAC
Trigger: ACAGGCCAGTCTCAGGGCCAATACAGTAAAATTACT...GGCCCTCAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
CDS-3UTR CAA 90 bp TGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGACGACTGCACACAGCCTaGAAAGCCTCGGTTTGTCCC +
Preference number: 5 (lower is better)
Translates to: WTKSDASYTENSAGSARGRLHTA*KASVCP
Trigger: GGGACAAACCGAGGCTTTCAAGGCTGTGTGCAGTCG...TCCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
CDS-3UTR CAA 90 bp GATCTCTGGCAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACACGAAGCTCGTGCCAGTaGCCCAGGGTGAGGGGATCT +
Preference number: 5 (lower is better)
Translates to: DLWQPLHIQWTKSDASYTRSSCQ*PRVRGS
Trigger: AGATCCCCTCACCCTGGGCAACTGGCACGAGCTTCG...TGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTGCCAGAGATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR CAA 90 bp ACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGAGGGCCCCTGTAAGATTCCATTCTTaGCTGTGCGAGATACACGAA +
Preference number: 5 (lower is better)
Translates to: TPGPWASAYSIRQGLRAPVRFHS*LCEIHE
Trigger: TTCGTGTATCTCGCACAGCAAAGAATGGAATCTTAC...AGGGGCCCTCAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR CAA 90 bp CCAGCCAGTGAGGAGTGGAAGGGGTTAATCCGAACAATCCAAGGGCCAATGTGGGAAATGAAGTCGCTGTaGGGTCTCATGGGGCTGTCT +
Preference number: 5 (lower is better)
Translates to: PASEEWKGLIRTIQGPMWEMKSL*GLMGLS
Trigger: AGACAGCCCCATGAGACCCAACAGCGACTTCATTTC...CCACATTGGCCCTTGGATTGTTCGGATTAACCCCTTCCACTCCTCACTGGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR CAA 90 bp AGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGGAGCCCTCTCATATATaGCCTGTTAGTGTGCAGAGC +
Preference number: 5 (lower is better)
Translates to: RGNTPGPWASAYSIRQGLEPSHI*PVSVQS
Trigger: GCTCTGCACACTAACAGGCAATATATGAGAGGGCTC...CAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
ENST00000506135.5
CDS TCA 90 bp CCACGGCATCTTCCACGAGGGAAATGTGGTAATCGGTGGACAGGGTaGAGTGAGAGATACAGCCCACGAGCCCTCTCATATATTGCCTGT +
Preference number: 5 (lower is better)
Translates to: PRHLPRGKCGNRWTG*SERYSPRALSYIAC
Trigger: ACAGGCAATATATGAGAGGGCTCGTGGGCTGTATCTCTCACTTCACCCTGTCCACCGATTACCACATTTCCCTCGTGGAAGATGCCGTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
ENST00000506135.5
ENST00000513131.1
ENST00000514476.1
CDS TCA 90 bp TTCCTGCAGCTTTGGTCCTGCGTCATGGTTCTGTCCAAGTTTTCGTaGCAGTCATCCTCCAACACCTTCCTGGTTTTCGGATGGCCGCTC +
Preference number: 5 (lower is better)
Translates to: FLQLWSCVMVLSKFS*QSSSNTFLVFGWPL
Trigger: GAGCGGCCATCCGAAAACCAGGAAGGTGTTGGAGGATGACTGTCACGAAAACTTGGACAGAACCATGACGCAGGACCAAAGCTGCAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504709.1
CDS GCA 90 bp CAGGGGTGGGCCGCATTCTCCACATTCACTCCGGAGGTGAAGTCATaGTTCACATGGATGGTTCGGTCATTCAGGATGATCTTCTGGATG +
Preference number: 5 (lower is better)
Translates to: QGWAAFSTFTPEVKS*FTWMVRSFRMIFWM
Trigger: CATCCAGAAGATCATCCTGAATGACCGAACCATCCATGTGAAGCATGACTTCACCTCCGGAGTGAATGTGGAGAATGCGGCCCACCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS CCA 90 bp GCCATGGGAATTCATTGCCCTCACGGCAAACTGGTAGTTGGTATCTaGATCGAGGCCCTTGATAACCATGGAGTCCATCTGGATCCGCTC +
Preference number: 5 (lower is better)
Translates to: AMGIHCPHGKLVVGI*IEALDNHGVHLDPL
Trigger: GAGCGGATCCAGATGGACTCCATGGTTATCAAGGGCCTCGATCCAGATACCAACTACCAGTTTGCCGTGAGGGCAATGAATTCCCATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS CCA 90 bp GCCGCATTCTCCACATTCACTCCGGAGGTGAAGTCATGCTTCACATaGATGGTTCGGTCATTCAGGATGATCTTCTGGATGCTCCCGCTG +
Preference number: 5 (lower is better)
Translates to: AAFSTFTPEVKSCFT*MVRSFRMIFWMLPL
Trigger: CAGCGGGAGCATCCAGAAGATCATCCTGAATGACCGAACCATCCATGTGAAGCATGACTTCACCTCCGGAGTGAATGTGGAGAATGCGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR CAA 90 bp GTACAGTTCAATGCGCCCAGCTTGATGTCAAGAGGAGGCCCTACCTTGCCTGTTGACTTCCAGGATGCCTaGGCATTTTCCACTGGATGC +
Preference number: 5 (lower is better)
Translates to: VQFNAPSLMSRGGPTLPVDFQDA*AFSTGC
Trigger: GCATCCAGTGGAAAATGCCAAGGCATCCTGGAAGTC...AACAGGCAAGGTAGGGCCTCCTCTTGACATCAAGCTGGGCGCATTGAACTGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504709.1
CDS-3UTR CAA 90 bp GTGAGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTATTGAGGTCCACTTCTaGTCGAAATCTGGCCTGATG +
Preference number: 5 (lower is better)
Translates to: VRGNTPGPWASAYSIRQGIEVHF*SKSGLM
Trigger: CATCAGGCCAGATTTCGACAAGAAGTGGACCTCAAT...ACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS-3UTR CAA 90 bp GGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGAGGGATCCGCTCATGGATaGAGGTCCACTTCTTGTCGA +
Preference number: 5 (lower is better)
Translates to: GQSPMLPTQRILLGQLVEGSAHG*RSTSCR
Trigger: TCGACAAGAAGTGGACCTCAATCCATGAGCGGATCC...CTCCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS-3UTR CAA 90 bp TCTGGCAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGACAGCTCTCACCACCTTaGCCCAGGGTGCACTGGCAT +
Preference number: 5 (lower is better)
Translates to: SGSRYIFNGQSPMLPTQRQLSPP*PRVHWH
Trigger: ATGCCAGTGCACCCTGGGCAAAGGTGGTGAGAGCTG...TCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTGCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
CDS-3UTR CAA 90 bp GACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGAGTTGCCACCGACCATCGTaGAAGGAGCCATTCACCATG +
Preference number: 5 (lower is better)
Translates to: DKVRCFLHREFCWVSSWSCHRPS*KEPFTM
Trigger: CATGGTGAATGGCTCCTTCAACGATGGTCGGTGGCA...ACTCCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR CAA 90 bp GTGAGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTACATACAGAGCTCCATaGATGTTAAGCTGCCGCATC +
Preference number: 5 (lower is better)
Translates to: VRGNTPGPWASAYSIRQGTYRAP*MLSCRI
Trigger: GATGCGGCAGCTTAACATCAATGGAGCTCTGTATGT...ACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
ENST00000506135.5
CDS-3UTR CAA 90 bp AGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGTTGGCTCCACAAGTGTaGATGTTTTTCCCATCCACG +
Preference number: 5 (lower is better)
Translates to: RGNTPGPWASAYSIRQGLLAPQV*MFFPST
Trigger: CGTGGATGGGAAAAACATCAACACTTGTGGAGCCAA...CAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
ENST00000506135.5
CDS-3UTR CAA 90 bp AGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGGACAGCTCCTTCCTCTaGTCTCTATCTTTGTACAGC +
Preference number: 5 (lower is better)
Translates to: RGNTPGPWASAYSIRQGLDSSFL*SLSLYS
Trigger: GCTGTACAAAGATAGAGACAAGAGGAAGGAGCTGTC...CAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336740.10
ENST00000397202.6
CDS-3UTR CAA 90 bp TTCAGTGCCTGGTTTCAAATCTCCAATCACTTCCTCCGTGGTCGGGATGTCCCGCTGTTTCCTGCAGCTTaGGTCCTGCGTCATGGTTCT +
Preference number: 5 (lower is better)
Translates to: FSAWFQISNHFLRGRDVPLFPAA*VLRHGS
Trigger: AGAACCATGACGCAGGACCAAAGCTGCAGGAAACAG...CGGGACATCCCGACCACGGAGGAAGTGATTGGAGATTTGAAACCAGGCACTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504709.1
CDS TCA 90 bp GTCCCTTGGACAAGGCCAGCTGGTGTTACTTGGCTCCACAAGTGTTaGTGTTTTTCCCATCCACGGCATCTTCCACGAGGGAAATGTGGT +
Preference number: 5 (lower is better)
Translates to: VPWTRPAGVTWLHKC*CFSHPRHLPRGKCG
Trigger: ACCACATTTCCCTCGTGGAAGATGCCGTGGATGGGAAAAACATCAACACTTGTGGAGCCAAGTAACACCAGCTGGCCTTGTCCAAGGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
ENST00000506135.5
ENST00000513131.1
ENST00000514476.1
CDS GCA 90 bp ATGCCTTGGCATTTTCCACTGGATGCTGAAAGCCGTACAGTTCAATaGGCCCAGCTTGATGTCAAGAGGAGGCCCTACCTTGCCTGGTTT +
Preference number: 5 (lower is better)
Translates to: MPWHFPLDAESRTVQ*AQLDVKRRPYLAWF
Trigger: AAACCAGGCAAGGTAGGGCCTCCTCTTGACATCAAGCTGGGCGCATTGAACTGTACGGCTTTCAGCATCCAGTGGAAAATGCCAAGGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS-3UTR CAA 90 bp GCCAACCTCAGAGTAAAAGACAGTGTACCCAAGGATGGGACTTCCAGGATGCCTAGGCAGGCAGGAATCTaGGGACAAAGTGGTGACATG +
Preference number: 5 (lower is better)
Translates to: ANLRVKDSVPKDGTSRMPRQAGI*GQSGDM
Trigger: CATGTCACCACTTTGTCCCAAGATTCCTGCCTGCCT...AGGCATCCTGGAAGTCCCATCCTTGGGTACACTGTCTTTTACTCTGAGGTTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504709.1
CDS-3UTR CAA 90 bp GCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCCAGCTCTCACCACCTTaGCCCAGGGTGCACTGGCAT +
Preference number: 5 (lower is better)
Translates to: AATYSMDKVRCFLHREFCQLSPP*PRVHWH
Trigger: ATGCCAGTGCACCCTGGGCAAAGGTGGTGAGAGCTG...GCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
CDS-3UTR CAA 90 bp TTCAGAGTCATCCACCCAAACTTCCAAAAGTATACTGTGTGGACAATCTGCAGCGTCACTGGGGTGCCATaGTTCAGCTGCAGCAGCCCG +
Preference number: 5 (lower is better)
Translates to: FRVIHPNFQKYTVWTICSVTGVP*FSCSSP
Trigger: CGGGCTGCTGCAGCTGAACAATGGCACCCCAGTGAC...GCTGCAGATTGTCCACACAGTATACTTTTGGAAGTTTGGGTGGATGACTCTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322350.10
CDS-3UTR CAA 90 bp TTCACATTCGAGGTAAGCTCTGGGGAAGGGGGCCGCATTATGATTATGATTCTGCCAGTGGCCAGGGAGTaGCAGCGTAAGATCTCAGAG +
Preference number: 5 (lower is better)
Translates to: FTFEVSSGEGGRIMIMILPVARE*QRKISE
Trigger: CTCTGAGATCTTACGCTGCAACTCCCTGGCCACTGG...CAGAATCATAATCATAATGCGGCCCCCTTCCCCAGAGCTTACCTCGAATGTGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322350.10
CDS-3UTR CAA 90 bp TCTCTGGCAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGACCAGTGGCCAGGGAGTaGCAGCGTAAGATCTCAGAG +
Preference number: 5 (lower is better)
Translates to: SLAAATYSMDKVRCFLHRPVARE*QRKISE
Trigger: CTCTGAGATCTTACGCTGCAACTCCCTGGCCACTGG...TCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTGCCAGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR CAA 90 bp GTGAGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTAGCAAAAGGCCATCCTaGGCAGTTGTTTTAAACCTC +
Preference number: 5 (lower is better)
Translates to: VRGNTPGPWASAYSIRQGSKRPS*AVVLNL
Trigger: GAGGTTTAAAACAACTGCCAAGGATGGCCTTTTGCT...ACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
ENST00000506135.5
CDS-3UTR CAA 90 bp AGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGAGCAAAAGGCCATCCTaGGCAGTTGTTTTAAACCTC +
Preference number: 5 (lower is better)
Translates to: RGNTPGPWASAYSIRQGLSKRPS*AVVLNL
Trigger: GAGGTTTAAAACAACTGCCAAGGATGGCCTTTTGCT...CAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
ENST00000506135.5
CDS-3UTR CAA 90 bp CGGGATGTCCCGGCTGAGAGGCACGCTGTGCAACTGCTCCTGCAGGGATTTATCTTCCAGTTGGACTGGTaGCCTTTTCTATCTAGTAAA +
Preference number: 5 (lower is better)
Translates to: RDVPAERHAVQLLLQGFIFQLDW*PFLSSK
Trigger: TTTACTAGATAGAAAAGGCAACCAGTCCAACTGGAA...GATAAATCCCTGCAGGAGCAGTTGCACAGCGTGCCTCTCAGCCGGGACATCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504709.1
CDS-3UTR CAA 90 bp TCACTCGCTCCAGGTTTCCAAGACAGGGCCACCTCAGAATCCGAAACCACAATGCCTTGCCTGTTCCAGTaGGACTGGTTGCCTTTTCTA +
Preference number: 5 (lower is better)
Translates to: SLAPGFQDRATSESETTMPCLFQ*DWLPFL
Trigger: TAGAAAAGGCAACCAGTCCAACTGGAACAGGCAAGG...CATTGTGGTTTCGGATTCTGAGGTGGCCCTGTCTTGGAAACCTGGAGCGAGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504709.1
CDS TCA 90 bp GATCGTATTGAGGCAGTAGTTCCCACACTCTGCCCGGTGCCAGCATaGAAGAGAACAGGGAGAGTCAGCCTTTCACAGTCCTTGTCAAAT +
Preference number: 5 (lower is better)
Translates to: DRIEAVVPTLCPVPA*KRTGRVSLSQSLSN
Trigger: ATTTGACAAGGACTGTGAAAGGCTGACTCTCCCTGTTCTCTTTCATGCTGGCACCGGGCAGAGTGTGGGAACTACTGCCTCAATACGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000397210.7
ENST00000506135.5
ENST00000508868.5
CDS TCA 90 bp TGTTCTGGCTCCCTTCTGAATCACTCTGGCATGATCTGCAATGTCTaGGAAAATCGCAAGGTGCTGCTGAAGGCAGATGGAGAGGGGGTT +
Preference number: 5 (lower is better)
Translates to: CSGSLLNHSGMICNV*ENRKVLLKADGEGV
Trigger: AACCCCCTCTCCATCTGCCTTCAGCAGCACCTTGCGATTTTCTCAGACATTGCAGATCATGCCAGAGTGATTCAGAAGGGAGCCAGAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508868.5
CDS CCA 90 bp GGATCGAGGCCCTTGATAACCATGGAGTCCATCTGGATCCGCTCATaGATTGAGGTCCACTTCTTGTCGAAATCTGGCCTGATGAATTCC +
Preference number: 5 (lower is better)
Translates to: GSRPLITMESIWIRS*IEVHFLSKSGLMNS
Trigger: GGAATTCATCAGGCCAGATTTCGACAAGAAGTGGACCTCAATCCATGAGCGGATCCAGATGGACTCCATGGTTATCAAGGGCCTCGATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS-3UTR CAA 90 bp CTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGAGAGGAGGCCCTACCTaGCCTGGTTTTCGGATGGCC +
Preference number: 5 (lower is better)
Translates to: LHIQWTKSDASYTENSAGRGGPT*PGFRMA
Trigger: GGCCATCCGAAAACCAGGCAAGGTAGGGCCTCCTCT...CCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS-3UTR CAA 90 bp CAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTAGAGGAGGCCCTACCTaGCCTGGTTTTCGGATGGCC +
Preference number: 5 (lower is better)
Translates to: QPLHIQWTKSDASYTENSRGGPT*PGFRMA
Trigger: GGCCATCCGAAAACCAGGCAAGGTAGGGCCTCCTCT...AGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS-3UTR CAA 90 bp CCCTGCACAGCCTTGGGAACACTGATTGTATTAGTGTCCATTGGTATGAACCTGTTCAATGCGCCCAGCTaGATGTCAAGAGGAGGCCCT +
Preference number: 5 (lower is better)
Translates to: PCTALGTLIVLVSIGMNLFNAPS*MSRGGP
Trigger: AGGGCCTCCTCTTGACATCAAGCTGGGCGCATTGAA...CAGGTTCATACCAATGGACACTAATACAATCAGTGTTCCCAAGGCTGTGCAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322350.10
CDS-3UTR CAA 90 bp AGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTCTGTTCTTATTCCCTCCTTaGGTAGCAGGAAGTGGTTTA +
Preference number: 5 (lower is better)
Translates to: RGNTPGPWASAYSIRQGLFLFPP*VAGSGL
Trigger: TAAACCACTTCCTGCTACCAAAGGAGGGAATAAGAA...CAGACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
CDS-3UTR CAA 90 bp CAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTCAGCTCTCACCACCTTaGCCCAGGGTGCACTGGCAT +
Preference number: 5 (lower is better)
Translates to: QPLHIQWTKSDASYTENSQLSPP*PRVHWH
Trigger: ATGCCAGTGCACCCTGGGCAAAGGTGGTGAGAGCTG...AGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
CDS-3UTR CAA 90 bp GGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGAGTGCCAACCCCCTAGTTaGATTTTGGTCTCACTTACG +
Preference number: 5 (lower is better)
Translates to: GQSPMLPTQRILLGQLVECQPPS*ILVSLT
Trigger: CGTAAGTGAGACCAAAATCAAACTAGGGGGTTGGCA...CTCCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR CAA 90 bp TTGGTGAGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGAGTAATTTTACTGTATaGGCCCTGAGACTGGCCTGT +
Preference number: 5 (lower is better)
Translates to: LVRGNTPGPWASAYSIRQSNFTV*ALRLAC
Trigger: ACAGGCCAGTCTCAGGGCCAATACAGTAAAATTACT...CTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCTCACCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
CDS-3UTR CAA 90 bp GATCTCTGGCAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACATGGCCCCCTGCCAAGTaGATGGACAGGAAGTCTTTG +
Preference number: 5 (lower is better)
Translates to: DLWQPLHIQWTKSDASYTWPPAK*MDRKSL
Trigger: CAAAGACTTCCTGTCCATCAACTTGGCAGGGGGCCA...TGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTGCCAGAGATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR CAA 90 bp TCTGGCAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGATGCCACCGACCATCGTaGAAGGAGCCATTCACCATG +
Preference number: 5 (lower is better)
Translates to: SGSRYIFNGQSPMLPTQRCHRPS*KEPFTM
Trigger: CATGGTGAATGGCTCCTTCAACGATGGTCGGTGGCA...TCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTGCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR CAA 90 bp GATCTCTGGCAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACATGCCACCGACCATCGTaGAAGGAGCCATTCACCATG +
Preference number: 5 (lower is better)
Translates to: DLWQPLHIQWTKSDASYTCHRPS*KEPFTM
Trigger: CATGGTGAATGGCTCCTTCAACGATGGTCGGTGGCA...TGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTGCCAGAGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR CAA 90 bp GGCCACCCAGGGATGCCTGTCTTGGTTCTCAGTTTCTCATCAGTGTGTACTTTCGAGCCCTCTCATATATaGCCTGTTAGTGTGCAGAGC +
Preference number: 5 (lower is better)
Translates to: GHPGMPVLVLSFSSVCTFEPSHI*PVSVQS
Trigger: GCTCTGCACACTAACAGGCAATATATGAGAGGGCTC...GAAAGTACACACTGATGAGAAACTGAGAACCAAGACAGGCATCCCTGGGTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR CAA 90 bp GGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGAGTTGGCTCCACAAGTGTaGATGTTTTTCCCATCCACG +
Preference number: 5 (lower is better)
Translates to: GQSPMLPTQRILLGQLVELAPQV*MFFPST
Trigger: CGTGGATGGGAAAAACATCAACACTTGTGGAGCCAA...CTCCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR CAA 90 bp TTGGTGAGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGTGTGTACTTTCTTCTaGGTGAGAGGAAACACACCT +
Preference number: 5 (lower is better)
Translates to: LVRGNTPGPWASAYSIRQVCTFF*VRGNTP
Trigger: AGGTGTGTTTCCTCTCACCAAGAAGAAAGTACACAC...CTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCTCACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
ENST00000506135.5
CDS-3UTR CAA 90 bp GATCTCTGGCAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGGTCAGCTCCCCAAGTaGCCCACCCAAGTTACCTAT +
Preference number: 5 (lower is better)
Translates to: DLWQPLHIQWTKSDASYTGQLPK*PTQVTY
Trigger: ATAGGTAACTTGGGTGGGCAACTTGGGGAGCTGACC...TGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTGCCAGAGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322350.10
CDS-3UTR CAA 90 bp GTGAGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTAGCCTTTCACAGTCCTaGTCAAATCCCAATTACTCT +
Preference number: 5 (lower is better)
Translates to: VRGNTPGPWASAYSIRQGSLSQS*SNPNYS
Trigger: AGAGTAATTGGGATTTGACAAGGACTGTGAAAGGCT...ACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397210.7
ENST00000506135.5
CDS TCA 90 bp GAGGCCCTTGATAACCATGGAGTCCATCTGGATCCGCTCATGGATTaGGGTCCACTTCTTGTCGAAATCTGGCCTGATGAATTCCACAGA +
Preference number: 5 (lower is better)
Translates to: EALDNHGVHLDPLMD*GPLLVEIWPDEFHR
Trigger: TCTGTGGAATTCATCAGGCCAGATTTCGACAAGAAGTGGACCTCAATCCATGAGCGGATCCAGATGGACTCCATGGTTATCAAGGGCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS TCA 90 bp CTTACTATTGAGGCAGTAGTTCCCACACTCTGCCCGGTGCCAGCATaGAAGAGAACAGGGAGAGTCAGCCTTTCACAGTCCTTGTCAAAT +
Preference number: 5 (lower is better)
Translates to: LTIEAVVPTLCPVPA*KRTGRVSLSQSLSN
Trigger: ATTTGACAAGGACTGTGAAAGGCTGACTCTCCCTGTTCTCTTTCATGCTGGCACCGGGCAGAGTGTGGGAACTACTGCCTCAATAGTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508131.5
CDS CCA 90 bp ACCCACATACAGAGCTCCATTGATGTTAAGCTGCCGCATCATGCCTaGGGATTTGCCTGTTCTGGCTCCATAGTCATCCACGGTTATCTT +
Preference number: 5 (lower is better)
Translates to: THIQSSIDVKLPHHA*GFACSGSIVIHGYL
Trigger: AAGATAACCGTGGATGACTATGGAGCCAGAACAGGCAAATCCCCAGGCATGATGCGGCAGCTTAACATCAATGGAGCTCTGTATGTGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
ENST00000506135.5
ENST00000508131.5
ENST00000513131.1
ENST00000514476.1
CDS CCA 90 bp TCCTGGATTGGATCTTCTGTTTCCTGCAGCTTTGGTCCTGCGTCATaGTTCTGTCCAAGTTTTCGTGACAGTCATCCTCCAACACCTTCC +
Preference number: 5 (lower is better)
Translates to: SWIGSSVSCSFGPAS*FCPSFRDSHPPTPS
Trigger: GGAAGGTGTTGGAGGATGACTGTCACGAAAACTTGGACAGAACCATGACGCAGGACCAAAGCTGCAGGAAACAGAAGATCCAATCCAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504709.1
CDS CCA 90 bp AGCCTTGAAGCTTCAGGCTTCAGCCAATTCCAGCAGACTGTGTTCTaGCTCCCTTCTGAATCACTCTGGCATGATCTGCAATGTCTGAGA +
Preference number: 5 (lower is better)
Translates to: SLEASGFSQFQQTVF*LPSESLWHDLQCLR
Trigger: TCTCAGACATTGCAGATCATGCCAGAGTGATTCAGAAGGGAGCCAGAACACAGTCTGCTGGAATTGGCTGAAGCCTGAAGCTTCAAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508868.5
CDS-3UTR CAA 90 bp CAGGCTCTGGAATTTGCATTGATGTGTGATCTCTGGCAGCCGCTACATATTCAAGGCCATGGGAATTCATaGCCCTCACGGCAAACTGGT +
Preference number: 5 (lower is better)
Translates to: QALEFALMCDLWQPLHIQGHGNS*PSRQTG
Trigger: ACCAGTTTGCCGTGAGGGCAATGAATTCCCATGGCC...TTGAATATGTAGCGGCTGCCAGAGATCACACATCAATGCAAATTCCAGAGCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS-3UTR CAA 90 bp ATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGTGCCAACCCCCTAGTTaGATTTTGGTCTCACTTACG +
Preference number: 5 (lower is better)
Translates to: MDKVRCFLHREFCWVSSWCQPPS*ILVSLT
Trigger: CGTAAGTGAGACCAAAATCAAACTAGGGGGTTGGCA...CCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR CAA 90 bp CTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGCCAGTGGCCAGGGAGTaGCAGCGTAAGATCTCAGAG +
Preference number: 5 (lower is better)
Translates to: LHIQWTKSDASYTENSAGPVARE*QRKISE
Trigger: CTCTGAGATCTTACGCTGCAACTCCCTGGCCACTGG...CCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR CAA 90 bp GATCTCTGGCAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAAATGAAGTCGCTGTaGGGTCTCATGGGGCTGTCT +
Preference number: 5 (lower is better)
Translates to: DLWQPLHIQWTKSDASYTEMKSL*GLMGLS
Trigger: AGACAGCCCCATGAGACCCAACAGCGACTTCATTTC...TGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTGCCAGAGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR CAA 90 bp TCTCTGGCAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAAATGAAGTCGCTGTaGGGTCTCATGGGGCTGTCT +
Preference number: 5 (lower is better)
Translates to: SLAAATYSMDKVRCFLHREMKSL*GLMGLS
Trigger: AGACAGCCCCATGAGACCCAACAGCGACTTCATTTC...TCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTGCCAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR CAA 90 bp GCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGCCACCGACCATCGTaGAAGGAGCCATTCACCATG +
Preference number: 5 (lower is better)
Translates to: AATYSMDKVRCFLHREFCCHRPS*KEPFTM
Trigger: CATGGTGAATGGCTCCTTCAACGATGGTCGGTGGCA...GCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR CAA 90 bp TCTGGCAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAGCCAGCTGGTGTTACTaGGCTCCACAAGTGTTGATG +
Preference number: 5 (lower is better)
Translates to: SGSRYIFNGQSPMLPTQRASWCY*APQVLM
Trigger: CATCAACACTTGTGGAGCCAAGTAACACCAGCTGGC...TCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTGCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR CAA 90 bp ATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGGCTCTGGAATTTGCATaGATGTGTGATCTCTGGCAG +
Preference number: 5 (lower is better)
Translates to: MDKVRCFLHREFCWVSSWALEFA*MCDLWQ
Trigger: CTGCCAGAGATCACACATCAATGCAAATTCCAGAGC...CCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR CAA 90 bp GTAAGTCCATCATGGGGATCTGCCAGTGAACCAGCTGTCTCTGGGGTCATGTGCAAACCCCAAAAGTCTTaGCTGAATGAATGCTGCACA +
Preference number: 5 (lower is better)
Translates to: VSPSWGSASEPAVSGVMCKPQKS*LNECCT
Trigger: TGTGCAGCATTCATTCAGCAAAGACTTTTGGGGTTT...GCACATGACCCCAGAGACAGCTGGTTCACTGGCAGATCCCCATGATGGACTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000322350.10
CDS-3UTR CAA 90 bp TGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGACACTTGAAGCCAGCCTaGTTTCTCTCACAAAGCTCT +
Preference number: 5 (lower is better)
Translates to: WTKSDASYTENSAGSARGHLKPA*FLSQSS
Trigger: AGAGCTTTGTGAGAGAAACAAGGCTGGCTTCAAGTG...TCCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397210.7
CDS TCA 90 bp CATGCAGCGTATCTGTGTGCCAGATGTCTTCACACAAAAGGCCCTTaGGGACAGCTCCTTCCTCTTGTCTCTATCTTTGTACAGCAAGCA +
Preference number: 5 (lower is better)
Translates to: HAAYLCARCLHTKGP*GQLLPLVSIFVQQA
Trigger: TGCTTGCTGTACAAAGATAGAGACAAGAGGAAGGAGCTGTCCTCAAGGGCCTTTTGTGTGAAGACATCTGGCACACAGATACGCTGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336740.10
ENST00000397202.6
CDS GCA 90 bp TGGGGACTTCTTATATCCCTCTCCTGGATTGGATCTTCTGTTTCCTaGAGCTTTGGTCCTGCGTCATGGTTCTGTCCAAGTTTTCGTGAC +
Preference number: 5 (lower is better)
Translates to: WGLLISLSWIGSSVS*SFGPASWFCPSFRD
Trigger: GTCACGAAAACTTGGACAGAACCATGACGCAGGACCAAAGCTGCAGGAAACAGAAGATCCAATCCAGGAGAGGGATATAAGAAGTCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504709.1
CDS CCA 90 bp AGCCAATTCCAGCAGACTGTGTTCTGGCTCCCTTCTGAATCACTCTaGCATGATCTGCAATGTCTGAGAAAATCGCAAGGTGCTGCTGAA +
Preference number: 5 (lower is better)
Translates to: SQFQQTVFWLPSESL*HDLQCLRKSQGAAE
Trigger: TTCAGCAGCACCTTGCGATTTTCTCAGACATTGCAGATCATGCCAGAGTGATTCAGAAGGGAGCCAGAACACAGTCTGCTGGAATTGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508868.5
CDS-3UTR CAA 90 bp GCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCAGGCAGGCAGGAATCTaGGGACAAAGTGGTGACATG +
Preference number: 5 (lower is better)
Translates to: AATYSMDKVRCFLHREFCRQAGI*GQSGDM
Trigger: CATGTCACCACTTTGTCCCAAGATTCCTGCCTGCCT...GCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS-3UTR CAA 90 bp ATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGCCCCCTAGTTTGATTTaGGTCTCACTTACGATGATG +
Preference number: 5 (lower is better)
Translates to: MDKVRCFLHREFCWVSSWPPSLI*VSLTMM
Trigger: CATCATCGTAAGTGAGACCAAAATCAAACTAGGGGG...CCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR CAA 90 bp AATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGTGCCAACCCCCTAGTTaGATTTTGGTCTCACTTACG +
Preference number: 5 (lower is better)
Translates to: NGQSPMLPTQRILLGQLVCQPPS*ILVSLT
Trigger: CGTAAGTGAGACCAAAATCAAACTAGGGGGTTGGCA...CACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR CAA 90 bp TACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCGACTGCACACAGCCTaGAAAGCCTCGGTTTGTCCC +
Preference number: 5 (lower is better)
Translates to: YIFNGQSPMLPTQRILLGRLHTA*KASVCP
Trigger: GGGACAAACCGAGGCTTTCAAGGCTGTGTGCAGTCG...ACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
CDS-3UTR CAA 90 bp CAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTTGGCCCCCTGCCAAGTaGATGGACAGGAAGTCTTTG +
Preference number: 5 (lower is better)
Translates to: QPLHIQWTKSDASYTENSWPPAK*MDRKSL
Trigger: CAAAGACTTCCTGTCCATCAACTTGGCAGGGGGCCA...AGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR CAA 90 bp CTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTGGCCCCCTGCCAAGTaGATGGACAGGAAGTCTTTG +
Preference number: 5 (lower is better)
Translates to: LHIQWTKSDASYTENSAGWPPAK*MDRKSL
Trigger: CAAAGACTTCCTGTCCATCAACTTGGCAGGGGGCCA...CCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR CAA 90 bp GTGAGAGGAAACACACCTGGTCCCTGGGCCTCTGCATATAGCATCAGGCAGGGTATGAAAATGTCTGTGTaGCACTTAATCTGTGTGAAG +
Preference number: 5 (lower is better)
Translates to: VRGNTPGPWASAYSIRQGMKMSV*HLICVK
Trigger: CTTCACACAGATTAAGTGCAACACAGACATTTTCAT...ACCCTGCCTGATGCTATATGCAGAGGCCCAGGGACCAGGTGTGTTTCCTCTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR CAA 90 bp TGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGAAGCAAAAGGCCATCCTaGGCAGTTGTTTTAAACCTC +
Preference number: 5 (lower is better)
Translates to: WTKSDASYTENSAGSARGSKRPS*AVVLNL
Trigger: GAGGTTTAAAACAACTGCCAAGGATGGCCTTTTGCT...TCCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR CAA 90 bp GACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGAGTAGCAAAAGGCCATCCTaGGCAGTTGTTTTAAACCTC +
Preference number: 5 (lower is better)
Translates to: DKVRCFLHREFCWVSSWSSKRPS*AVVLNL
Trigger: GAGGTTTAAAACAACTGCCAAGGATGGCCTTTTGCT...ACTCCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR CAA 90 bp ACAGCCTTGGGAACACTGATTGTATTAGTGTCCATTGGTATGAACCTGACCTCCGCCAGCTGGTGTTACTaGGCTCCACAAGTGTTGATG +
Preference number: 5 (lower is better)
Translates to: TALGTLIVLVSIGMNLTSASWCY*APQVLM
Trigger: CATCAACACTTGTGGAGCCAAGTAACACCAGCTGGC...GGAGGTCAGGTTCATACCAATGGACACTAATACAATCAGTGTTCCCAAGGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322350.10
CDS-3UTR CAA 90 bp GACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGAGTGTGTGTACTTTCTTCTaGGTGAGAGGAAACACACCT +
Preference number: 5 (lower is better)
Translates to: DKVRCFLHREFCWVSSWSVCTFF*VRGNTP
Trigger: AGGTGTGTTTCCTCTCACCAAGAAGAAAGTACACAC...ACTCCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR CAA 90 bp ATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGGTGTGTACTTTCTTCTaGGTGAGAGGAAACACACCT +
Preference number: 5 (lower is better)
Translates to: MDKVRCFLHREFCWVSSWVCTFF*VRGNTP
Trigger: AGGTGTGTTTCCTCTCACCAAGAAGAAAGTACACAC...CCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR CAA 90 bp TCTGGCAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGACTCTTGTCTCTATCTTaGTACAGCAAGCAGTCCCCC +
Preference number: 5 (lower is better)
Translates to: SGSRYIFNGQSPMLPTQRLLSLS*YSKQSP
Trigger: GGGGGACTGCTTGCTGTACAAAGATAGAGACAAGAG...TCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTGCCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336740.10
ENST00000397202.6
CDS-3UTR CAA 90 bp CAGGCTCTGGAATTTGCATTGATGTGTGATCTCTGGCAGCCGCTACATATTCAATCACACAAAAGGCCCTaGAGGACAGCTCCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: QALEFALMCDLWQPLHIQSHKRP*RTAPSS
Trigger: AGAGGAAGGAGCTGTCCTCAAGGGCCTTTTGTGTGA...TTGAATATGTAGCGGCTGCCAGAGATCACACATCAATGCAAATTCCAGAGCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336740.10
ENST00000397202.6
CDS TCA 90 bp GTCTTTGCTGCCTGTGTCATAGCTGTACAGGAGGACACCATCTCCTaGGTCTGGCCGAAATGTGATCTCAAATTCCATGAAGGAAAGGTA +
Preference number: 5 (lower is better)
Translates to: VFAACVIAVQEDTIS*VWPKCDLKFHEGKV
Trigger: TACCTTTCCTTCATGGAATTTGAGATCACATTTCGGCCAGACTCAGGAGATGGTGTCCTCCTGTACAGCTATGACACAGGCAGCAAAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS TCA 90 bp TTCACAGTCCTTGTCAAATCCCAATTACTCTGGTTGCAGATCACTTaGAGCCAGCCTTGTTTCTCTCACAAAGCTCTGCCCGAGAGTCCA +
Preference number: 5 (lower is better)
Translates to: FTVLVKSQLLWLQIT*SQPCFSHKALPESP
Trigger: TGGACTCTCGGGCAGAGCTTTGTGAGAGAAACAAGGCTGGCTTCAAGTGATCTGCAACCAGAGTAATTGGGATTTGACAAGGACTGTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397210.7
ENST00000508868.5
CDS CCA 90 bp ATCTCCTTCCCACTATTATTCTGGGGACTTCTTATATCCCTCTCCTaGATTGGATCTTCTGTTTCCTGCAGCTTTGGTCCTGCGTCATGG +
Preference number: 5 (lower is better)
Translates to: ISFPLLFWGLLISLS*IGSSVSCSFGPASW
Trigger: CCATGACGCAGGACCAAAGCTGCAGGAAACAGAAGATCCAATCCAGGAGAGGGATATAAGAAGTCCCCAGAATAATAGTGGGAAGGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504709.1
CDS-3UTR CAA 90 bp TTCAGAGTCATCCACCCAAACTTCCAAAAGTATACTGTGTGGACAATCTGCAGCGACTTCCAGGATGCCTaGGCATTTTCCACTGGATGC +
Preference number: 5 (lower is better)
Translates to: FRVIHPNFQKYTVWTICSDFQDA*AFSTGC
Trigger: GCATCCAGTGGAAAATGCCAAGGCATCCTGGAAGTC...GCTGCAGATTGTCCACACAGTATACTTTTGGAAGTTTGGGTGGATGACTCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322350.10
CDS-3UTR CAA 90 bp CAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGACTTCCAGGATGCCTaGGCATTTTCCACTGGATGC +
Preference number: 5 (lower is better)
Translates to: QPLHIQWTKSDASYTENSDFQDA*AFSTGC
Trigger: GCATCCAGTGGAAAATGCCAAGGCATCCTGGAAGTC...AGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS-3UTR CAA 90 bp TTCAGAGTCATCCACCCAAACTTCCAAAAGTATACTGTGTGGACAATCTGCAGCAGGCAGGCAGGAATCTaGGGACAAAGTGGTGACATG +
Preference number: 5 (lower is better)
Translates to: FRVIHPNFQKYTVWTICSRQAGI*GQSGDM
Trigger: CATGTCACCACTTTGTCCCAAGATTCCTGCCTGCCT...GCTGCAGATTGTCCACACAGTATACTTTTGGAAGTTTGGGTGGATGACTCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322350.10
CDS-3UTR CAA 90 bp CTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGGGATCCGCTCATGGATaGAGGTCCACTTCTTGTCGA +
Preference number: 5 (lower is better)
Translates to: LHIQWTKSDASYTENSAGGSAHG*RSTSCR
Trigger: TCGACAAGAAGTGGACCTCAATCCATGAGCGGATCC...CCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS-3UTR CAA 90 bp GGCCACCCAGGGATGCCTGTCTTGGTTCTCAGTTTCTCATCAGTGTGTACTTTCTTCTTATTCCCTCCTTaGGTAGCAGGAAGTGGTTTA +
Preference number: 5 (lower is better)
Translates to: GHPGMPVLVLSFSSVCTFFLFPP*VAGSGL
Trigger: TAAACCACTTCCTGCTACCAAAGGAGGGAATAAGAA...GAAAGTACACACTGATGAGAAACTGAGAACCAAGACAGGCATCCCTGGGTGGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
CDS-3UTR CAA 90 bp CAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGAAATGAAGTCGCTGTaGGGTCTCATGGGGCTGTCT +
Preference number: 5 (lower is better)
Translates to: QPLHIQWTKSDASYTENSEMKSL*GLMGLS
Trigger: AGACAGCCCCATGAGACCCAACAGCGACTTCATTTC...AGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR CAA 90 bp GATCTCTGGCAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAACATACAGAGCTCCATaGATGTTAAGCTGCCGCATC +
Preference number: 5 (lower is better)
Translates to: DLWQPLHIQWTKSDASYTTYRAP*MLSCRI
Trigger: GATGCGGCAGCTTAACATCAATGGAGCTCTGTATGT...TGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTGCCAGAGATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR CAA 90 bp TCTCTGGCAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAACATACAGAGCTCCATaGATGTTAAGCTGCCGCATC +
Preference number: 5 (lower is better)
Translates to: SLAAATYSMDKVRCFLHRTYRAP*MLSCRI
Trigger: GATGCGGCAGCTTAACATCAATGGAGCTCTGTATGT...TCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTGCCAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR CAA 90 bp GCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCGAGCCCTCTCATATATaGCCTGTTAGTGTGCAGAGC +
Preference number: 5 (lower is better)
Translates to: AATYSMDKVRCFLHREFCEPSHI*PVSVQS
Trigger: GCTCTGCACACTAACAGGCAATATATGAGAGGGCTC...GCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR CAA 90 bp ATCACAACACAGTCACTGAGCTATAGCAGACAGGCTCTGGAATTTGCATTGATGGCCAGCTGGTGTTACTaGGCTCCACAAGTGTTGATG +
Preference number: 5 (lower is better)
Translates to: ITTQSLSYSRQALEFALMASWCY*APQVLM
Trigger: CATCAACACTTGTGGAGCCAAGTAACACCAGCTGGC...CATCAATGCAAATTCCAGAGCCTGTCTGCTATAGCTCAGTGACTGTGTTGTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR CAA 90 bp AATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGTGTGTACTTTCTTCTaGGTGAGAGGAAACACACCT +
Preference number: 5 (lower is better)
Translates to: NGQSPMLPTQRILLGQLVVCTFF*VRGNTP
Trigger: AGGTGTGTTTCCTCTCACCAAGAAGAAAGTACACAC...CACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR CAA 90 bp TCTCTGGCAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGCTCTGGAATTTGCATaGATGTGTGATCTCTGGCAG +
Preference number: 5 (lower is better)
Translates to: SLAAATYSMDKVRCFLHRALEFA*MCDLWQ
Trigger: CTGCCAGAGATCACACATCAATGCAAATTCCAGAGC...TCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTGCCAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR CAA 90 bp ATCACAACACAGTCACTGAGCTATAGCAGACAGGCTCTGGAATTTGCATTGATGTCACACAAAAGGCCCTaGAGGACAGCTCCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: ITTQSLSYSRQALEFALMSHKRP*RTAPSS
Trigger: AGAGGAAGGAGCTGTCCTCAAGGGCCTTTTGTGTGA...CATCAATGCAAATTCCAGAGCCTGTCTGCTATAGCTCAGTGACTGTGTTGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336740.10
ENST00000397202.6
CDS-3UTR CAA 90 bp GCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCCTGGTTGCAGATCACTaGAAGCCAGCCTTGTTTCTC +
Preference number: 5 (lower is better)
Translates to: AATYSMDKVRCFLHREFCLVADH*KPALFL
Trigger: GAGAAACAAGGCTGGCTTCAAGTGATCTGCAACCAG...GCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397210.7
CDS GCA 90 bp AGAGTCAGCCTTTCACAGTCCTTGTCAAATCCCAATTACTCTGGTTaGAGATCACTTGAAGCCAGCCTTGTTTCTCTCACAAAGCTCTGC +
Preference number: 5 (lower is better)
Translates to: RVSLSQSLSNPNYSG*RSLEASLVSLTKLC
Trigger: GCAGAGCTTTGTGAGAGAAACAAGGCTGGCTTCAAGTGATCTGCAACCAGAGTAATTGGGATTTGACAAGGACTGTGAAAGGCTGACTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397210.7
ENST00000508868.5
CDS-3UTR CAA 90 bp CCCTGCACAGCCTTGGGAACACTGATTGTATTAGTGTCCATTGGTATGAACCTGCCCCCTAGTTTGATTTaGGTCTCACTTACGATGATG +
Preference number: 5 (lower is better)
Translates to: PCTALGTLIVLVSIGMNLPPSLI*VSLTMM
Trigger: CATCATCGTAAGTGAGACCAAAATCAAACTAGGGGG...CAGGTTCATACCAATGGACACTAATACAATCAGTGTTCCCAAGGCTGTGCAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322350.10
CDS-3UTR CAA 90 bp GATCTCTGGCAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACACCCCCTAGTTTGATTTaGGTCTCACTTACGATGATG +
Preference number: 5 (lower is better)
Translates to: DLWQPLHIQWTKSDASYTPPSLI*VSLTMM
Trigger: CATCATCGTAAGTGAGACCAAAATCAAACTAGGGGG...TGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTGCCAGAGATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR CAA 90 bp TCTGGCAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGACCCCCTAGTTTGATTTaGGTCTCACTTACGATGATG +
Preference number: 5 (lower is better)
Translates to: SGSRYIFNGQSPMLPTQRPPSLI*VSLTMM
Trigger: CATCATCGTAAGTGAGACCAAAATCAAACTAGGGGG...TCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTGCCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR CAA 90 bp ACAGCCTTGGGAACACTGATTGTATTAGTGTCCATTGGTATGAACCTGACCTCCTGCCAACCCCCTAGTTaGATTTTGGTCTCACTTACG +
Preference number: 5 (lower is better)
Translates to: TALGTLIVLVSIGMNLTSCQPPS*ILVSLT
Trigger: CGTAAGTGAGACCAAAATCAAACTAGGGGGTTGGCA...GGAGGTCAGGTTCATACCAATGGACACTAATACAATCAGTGTTCCCAAGGCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322350.10
CDS-3UTR CAA 90 bp TCTCTGGCAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAAGTAATTTTACTGTATaGGCCCTGAGACTGGCCTGT +
Preference number: 5 (lower is better)
Translates to: SLAAATYSMDKVRCFLHRSNFTV*ALRLAC
Trigger: ACAGGCCAGTCTCAGGGCCAATACAGTAAAATTACT...TCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTGCCAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
CDS-3UTR CAA 90 bp GATCTCTGGCAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAAGCAAAAGGCCATCCTaGGCAGTTGTTTTAAACCTC +
Preference number: 5 (lower is better)
Translates to: DLWQPLHIQWTKSDASYTSKRPS*AVVLNL
Trigger: GAGGTTTAAAACAACTGCCAAGGATGGCCTTTTGCT...TGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTGCCAGAGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR CAA 90 bp TCTCTGGCAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAAGCAAAAGGCCATCCTaGGCAGTTGTTTTAAACCTC +
Preference number: 5 (lower is better)
Translates to: SLAAATYSMDKVRCFLHRSKRPS*AVVLNL
Trigger: GAGGTTTAAAACAACTGCCAAGGATGGCCTTTTGCT...TCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTGCCAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR CAA 90 bp ATCACAACACAGTCACTGAGCTATAGCAGACAGGCTCTGGAATTTGCATTGATGGAGCCCTCTCATATATaGCCTGTTAGTGTGCAGAGC +
Preference number: 5 (lower is better)
Translates to: ITTQSLSYSRQALEFALMEPSHI*PVSVQS
Trigger: GCTCTGCACACTAACAGGCAATATATGAGAGGGCTC...CATCAATGCAAATTCCAGAGCCTGTCTGCTATAGCTCAGTGACTGTGTTGTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR CAA 90 bp GCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTTGGCTCCACAAGTGTaGATGTTTTTCCCATCCACG +
Preference number: 5 (lower is better)
Translates to: AATYSMDKVRCFLHREFCLAPQV*MFFPST
Trigger: CGTGGATGGGAAAAACATCAACACTTGTGGAGCCAA...GCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR CAA 90 bp TACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTGCCAGCTGGTGTTACTaGGCTCCACAAGTGTTGATG +
Preference number: 5 (lower is better)
Translates to: YIFNGQSPMLPTQRILLGASWCY*APQVLM
Trigger: CATCAACACTTGTGGAGCCAAGTAACACCAGCTGGC...ACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR CAA 90 bp CTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCTGGGGTCATGTGCTaGCATAGTAAAGGGACACAG +
Preference number: 5 (lower is better)
Translates to: LHIQWTKSDASYTENSAGSGVMC*HSKGTQ
Trigger: CTGTGTCCCTTTACTATGCAAGCACATGACCCCAGA...CCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322350.10
CDS GCA 90 bp TTAATCTGTGTGAAGCCTCCCTCTGCCATTCCCTCCACTATCTTCTaGTTATCCACCTGTAAGATTCCATTCTTTGCTGTGCGAGATACA +
Preference number: 5 (lower is better)
Translates to: LICVKPPSAIPSTIF*LSTCKIPFFAVRDT
Trigger: TGTATCTCGCACAGCAAAGAATGGAATCTTACAGGTGGATAAGCAGAAGATAGTGGAGGGAATGGCAGAGGGAGGCTTCACACAGATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR CAA 90 bp CAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTATTGAGGTCCACTTCTaGTCGAAATCTGGCCTGATG +
Preference number: 5 (lower is better)
Translates to: QPLHIQWTKSDASYTENSIEVHF*SKSGLM
Trigger: CATCAGGCCAGATTTCGACAAGAAGTGGACCTCAAT...AGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS-3UTR CAA 90 bp TCTGGCAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAGTAAGATTCCATTCTTaGCTGTGCGAGATACACGAA +
Preference number: 5 (lower is better)
Translates to: SGSRYIFNGQSPMLPTQRVRFHS*LCEIHE
Trigger: TTCGTGTATCTCGCACAGCAAAGAATGGAATCTTAC...TCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTGCCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR CAA 90 bp ATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTCAGCTCGTGGATGAAAATGTCTGTGTaGCACTTAATCTGTGTGAAG +
Preference number: 5 (lower is better)
Translates to: MDKVRCFLHREFCWVSSWMKMSV*HLICVK
Trigger: CTTCACACAGATTAAGTGCAACACAGACATTTTCAT...CCACGAGCTGACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR CAA 90 bp CTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGACATACAGAGCTCCATaGATGTTAAGCTGCCGCATC +
Preference number: 5 (lower is better)
Translates to: LHIQWTKSDASYTENSAGTYRAP*MLSCRI
Trigger: GATGCGGCAGCTTAACATCAATGGAGCTCTGTATGT...CCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR CAA 90 bp CAGGCTCTGGAATTTGCATTGATGTGTGATCTCTGGCAGCCGCTACATATTCAAGTGTGTACTTTCTTCTaGGTGAGAGGAAACACACCT +
Preference number: 5 (lower is better)
Translates to: QALEFALMCDLWQPLHIQVCTFF*VRGNTP
Trigger: AGGTGTGTTTCCTCTCACCAAGAAGAAAGTACACAC...TTGAATATGTAGCGGCTGCCAGAGATCACACATCAATGCAAATTCCAGAGCCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR CAA 90 bp CAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTCTGGAATTTGCATaGATGTGTGATCTCTGGCAG +
Preference number: 5 (lower is better)
Translates to: QPLHIQWTKSDASYTENSALEFA*MCDLWQ
Trigger: CTGCCAGAGATCACACATCAATGCAAATTCCAGAGC...AGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR CAA 90 bp CAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGACAGCTCCTTCCTCTaGTCTCTATCTTTGTACAGC +
Preference number: 5 (lower is better)
Translates to: QPLHIQWTKSDASYTENSDSSFL*SLSLYS
Trigger: GCTGTACAAAGATAGAGACAAGAGGAAGGAGCTGTC...AGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336740.10
ENST00000397202.6
CDS-3UTR CAA 90 bp GCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTTCTTATTCCCTCCTTaGGTAGCAGGAAGTGGTTTA +
Preference number: 5 (lower is better)
Translates to: AATYSMDKVRCFLHREFCFLFPP*VAGSGL
Trigger: TAAACCACTTCCTGCTACCAAAGGAGGGAATAAGAA...GCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
CDS-3UTR CAA 90 bp CAGGCTCTGGAATTTGCATTGATGTGTGATCTCTGGCAGCCGCTACATATTCAAGTAAGATTCCATTCTTaGCTGTGCGAGATACACGAA +
Preference number: 5 (lower is better)
Translates to: QALEFALMCDLWQPLHIQVRFHS*LCEIHE
Trigger: TTCGTGTATCTCGCACAGCAAAGAATGGAATCTTAC...TTGAATATGTAGCGGCTGCCAGAGATCACACATCAATGCAAATTCCAGAGCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR CAA 90 bp TACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGTGCTCTGGAATTTGCATaGATGTGTGATCTCTGGCAG +
Preference number: 5 (lower is better)
Translates to: YIFNGQSPMLPTQRILLGALEFA*MCDLWQ
Trigger: CTGCCAGAGATCACACATCAATGCAAATTCCAGAGC...ACCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
CDS-3UTR CAA 90 bp CTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAGAATTCTGCTGGGGTAAGATTCCATTCTTaGCTGTGCGAGATACACGAA +
Preference number: 5 (lower is better)
Translates to: LHIQWTKSDASYTENSAGVRFHS*LCEIHE
Trigger: TTCGTGTATCTCGCACAGCAAAGAATGGAATCTTAC...CCCAGCAGAATTCTCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR CAA 90 bp TCTCTGGCAGCCGCTACATATTCAATGGACAAAGTCCGATGCTTCCTACACAGAATGAAAATGTCTGTGTaGCACTTAATCTGTGTGAAG +
Preference number: 5 (lower is better)
Translates to: SLAAATYSMDKVRCFLHRMKMSV*HLICVK
Trigger: CTTCACACAGATTAAGTGCAACACAGACATTTTCAT...TCTGTGTAGGAAGCATCGGACTTTGTCCATTGAATATGTAGCGGCTGCCAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS-3UTR CAA 90 bp AAGCTTCATATTCATCCTCTTGAGCCGTCAACATTTACCAAAAGAGAATGGTCACACCCCTGCACAGCCTaGGGAACACTGATTGTATTA +
Preference number: 5 (lower is better)
Translates to: KLHIHPLEPSTFTKREWSHPCTA*GTLIVL
Trigger: TAATACAATCAGTGTTCCCAAGGCTGTGCAGGGGTG...TGACCATTCTCTTTTGGTAAATGTTGACGGCTCAAGAGGATGAATATGAAGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322350.10
CDS-3UTR CAA 90 bp CTTATCTTGGAAAGCTTCATATTCATCCTCTTGAGCCGTCAACATTTACCAAAATATTTCACCCCCTCCTaGGGGGCAGTGTTCATCTCA +
Preference number: 5 (lower is better)
Translates to: LILESFIFILLSRQHLPKYFTPS*GAVFIS
Trigger: TGAGATGAACACTGCCCCCAAGGAGGGGGTGAAATA...TTTTGGTAAATGTTGACGGCTCAAGAGGATGAATATGAAGCTTTCCAAGATAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000322350.10
CDS-3UTR CAA 90 bp ATCACAACACAGTCACTGAGCTATAGCAGACAGGCTCTGGAATTTGCATTGATGAGCCTTTCACAGTCCTaGTCAAATCCCAATTACTCT +
Preference number: 5 (lower is better)
Translates to: ITTQSLSYSRQALEFALMSLSQS*SNPNYS
Trigger: AGAGTAATTGGGATTTGACAAGGACTGTGAAAGGCT...CATCAATGCAAATTCCAGAGCCTGTCTGCTATAGCTCAGTGACTGTGTTGTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397210.7
CDS-3UTR CAA 90 bp AGAGTCGAGACTGGGACTAATTATAGGCTCTTGCATAAGTTAGATCATATTTCAGAGCCCTCTCATATATaGCCTGTTAGTGTGCAGAGC +
Preference number: 5 (lower is better)
Translates to: RVETGTNYRLLHKLDHISEPSHI*PVSVQS
Trigger: GCTCTGCACACTAACAGGCAATATATGAGAGGGCTC...TGAAATATGATCTAACTTATGCAAGAGCCTATAATTAGTCCCAGTCTCGACTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322350.10
CDS-3UTR CAA 90 bp TTCAGAGTCATCCACCCAAACTTCCAAAAGTATACTGTGTGGACAATCTGCAGCATGAAAATGTCTGTGTaGCACTTAATCTGTGTGAAG +
Preference number: 5 (lower is better)
Translates to: FRVIHPNFQKYTVWTICSMKMSV*HLICVK
Trigger: CTTCACACAGATTAAGTGCAACACAGACATTTTCAT...GCTGCAGATTGTCCACACAGTATACTTTTGGAAGTTTGGGTGGATGACTCTGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322350.10
CDS-3UTR CAA 90 bp TTCAGAGTCATCCACCCAAACTTCCAAAAGTATACTGTGTGGACAATCTGCAGCCCAAACAAGTCTCTCTaGGGAGAAATTTTTAGGAAA +
Preference number: 5 (lower is better)
Translates to: FRVIHPNFQKYTVWTICSPNKSL*GEIFRK
Trigger: TTTCCTAAAAATTTCTCCCAAGAGAGACTTGTTTGG...GCTGCAGATTGTCCACACAGTATACTTTTGGAAGTTTGGGTGGATGACTCTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000322350.10
CDS GCA 90 bp TGTCTCTATCTTTGTACAGCAAGCAGTCCCCCTTATCTGTATTTTTaGTTTCTGCAATTTCATTTACCCTCGATCAACCACAGTCCAAAA +
Preference number: 5 (lower is better)
Translates to: CLYLCTASSPPYLYF*FLQFHLPSINHSPK
Trigger: TTTTGGACTGTGGTTGATCGAGGGTAAATGAAATTGCAGAAAGCAAAAATACAGATAAGGGGGACTGCTTGCTGTACAAAGATAGAGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336740.10
ENST00000397202.6
CDS-3UTR CAA 90 bp TTCATATTCATCCTCTTGAGCCGTCAACATTTACCAAAAGAGAATGGTCAGCTCTTCATATTCATCCTCTaGAGCCGTCAACATTTACCA +
Preference number: 5 (lower is better)
Translates to: FIFILLSRQHLPKENGQLFIFIL*SRQHLP
Trigger: TGGTAAATGTTGACGGCTCAAGAGGATGAATATGAA...GAGCTGACCATTCTCTTTTGGTAAATGTTGACGGCTCAAGAGGATGAATATGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322350.10
CDS GCA 72 bp GTTCCAAGAGGTAGGACTGCAGCCGGGAGGTCGGCGTaGGCGAGTGAAGCCGGCTGCAAGCTGCAGGGCTTT +
Preference number: 6 (lower is better)
Translates to: VPRGRTAAGRSA*ASEAGCKLQGF
Trigger: AAAGCCCTGCAGCTTGCAGCCGGCTTCACTCGCGCACGCCGACCTCCCGGCTGCAGTCCTACCTCTTGGAAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000354891.7
CDS GCA 72 bp GGGCCAGCTGCGGGGGCTGGGGCCATGGGAATTCATTaGCCTCACGGCAAACTGGTAGTTGGTATCTGGATC +
Preference number: 6 (lower is better)
Translates to: GPAAGAGAMGIH*PHGKLVVGIWI
Trigger: GATCCAGATACCAACTACCAGTTTGCCGTGAGGGCAATGAATTCCCATGGCCCCAGCCCCCGCAGCTGGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS GCA 72 bp CTGCTGCATTCCCCTGAGACTGGCCTGTCACTGGGGTaGCATTGTTCAGCTGCAGCAGCCCGTTCAGCCCAT +
Preference number: 6 (lower is better)
Translates to: LLHSPETGLSLG*HCSAAAARSAH
Trigger: ATGGGCTGAACGGGCTGCTGCAGCTGAACAATGGCACCCCAGTGACAGGCCAGTCTCAGGGGAATGCAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000397202.6
CDS CCA 72 bp TTCCACTGCTGCATTCCCCTGAGACTGGCCTGTCACTaGGGTGCCATTGTTCAGCTGCAGCAGCCCGTTCAG +
Preference number: 6 (lower is better)
Translates to: FHCCIPLRLACH*GAIVQLQQPVQ
Trigger: CTGAACGGGCTGCTGCAGCTGAACAATGGCACCCCAGTGACAGGCCAGTCTCAGGGGAATGCAGCAGTGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000397202.6
CDS CCA 72 bp CCAAGTTTTCGTGACAGTCATCCTCCAACACCTTCCTaGTTTTCGGATGGCCGCTCGGAGCGACACCGCGCC +
Preference number: 6 (lower is better)
Translates to: PSFRDSHPPTPS*FSDGRSERHRA
Trigger: GGCGCGGTGTCGCTCCGAGCGGCCATCCGAAAACCAGGAAGGTGTTGGAGGATGACTGTCACGAAAACTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504709.1
CDS CAA 72 bp TGGGCCAGCTGCGGGGGCTGGGGCCATGGGAATTCATaGCCCTCACGGCAAACTGGTAGTTGGTATCTGGAT +
Preference number: 6 (lower is better)
Translates to: WASCGGWGHGNS*PSRQTGSWYLD
Trigger: ATCCAGATACCAACTACCAGTTTGCCGTGAGGGCAATGAATTCCCATGGCCCCAGCCCCCGCAGCTGGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS CAA 90 bp GACTGGCCATCCCTAACGGCCTTAACTCGGTGCCACCGACCATCGTaGAAGGAGCCATTCACCATGATGGATGCCACACCACTGCCCAGG +
Preference number: 6 (lower is better)
Translates to: DWPSLTALTRCHRPS*KEPFTMMDATPLPR
Trigger: CCTGGGCAGTGGTGTGGCATCCATCATGGTGAATGGCTCCTTCAACGATGGTCGGTGGCACCGAGTTAAGGCCGTTAGGGATGGCCAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
ENST00000506135.5
ENST00000508131.5
ENST00000514476.1
CDS TCA 72 bp AAGGTGCTGCTGAAGGCAGATGGAGAGGGGGTTACCTaGACACGAGGGCTCCATCCCGAAGGCCCAAGGAAA +
Preference number: 6 (lower is better)
Translates to: KVLLKADGEGVT*TRGLHPEGPRK
Trigger: TTTCCTTGGGCCTTCGGGATGGAGCCCTCGTGTTCAGGTAACCCCCTCTCCATCTGCCTTCAGCAGCACCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508868.5
CDS GCA 72 bp TACTGTATTGGCCCTGAGACTGGCCTGTCACTGGGGTaGCATTGTTCAGCTGCAGCAGCCCGTTCAGCCCAT +
Preference number: 6 (lower is better)
Translates to: YCIGPETGLSLG*HCSAAAARSAH
Trigger: ATGGGCTGAACGGGCTGCTGCAGCTGAACAATGGCACCCCAGTGACAGGCCAGTCTCAGGGCCAATACAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
CDS GCA 72 bp CTGCACACAGCCTTGAAAGCCTCGGTTTGTCCCTGTTaGTCTAACCAACCAGTAAGCGCTGGGAGCGCCACC +
Preference number: 6 (lower is better)
Translates to: LHTALKASVCPC*SNQPVSAGSAT
Trigger: GGTGGCGCTCCCAGCGCTTACTGGTTGGTTAGAGCAACAGGGACAAACCGAGGCTTTCAAGGCTGTGTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
CDS GCA 72 bp CACAGTGCCAGCACTCCACGGCGAAGACCACAAGGGTaGTGTGGAATTACACCAGAGGAGCAGCGCCTAACT +
Preference number: 6 (lower is better)
Translates to: HSASTPRRRPQG*CGITPEEQRLT
Trigger: AGTTAGGCGCTGCTCCTCTGGTGTAATTCCACAGCACCCTTGTGGTCTTCGCCGTGGAGTGCTGGCACTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000513131.1
CDS CAA 72 bp GCTCCATCCCGAAGGCCCAAGGAAATGAAGTCGCTGTaGGGTCTCATGGGGCTGTCTCCCCTCCACAGCAAA +
Preference number: 6 (lower is better)
Translates to: APSRRPKEMKSL*GLMGLSPLHSK
Trigger: TTTGCTGTGGAGGGGAGACAGCCCCATGAGACCCAACAGCGACTTCATTTCCTTGGGCCTTCGGGATGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
ENST00000506135.5
ENST00000508131.5
ENST00000508868.5
ENST00000514476.1
CDS GCA 72 bp GAATCATCCCTCTGTCTGGCATATCCGTGCTCCATATaGTCCCTGCCCCATGGTCTGCAGCCGTCTCAGTTG +
Preference number: 6 (lower is better)
Translates to: ESSLCLAYPCSI*SLPHGLQPSQL
Trigger: CAACTGAGACGGCTGCAGACCATGGGGCAGGGAGCATATGGAGCACGGATATGCCAGACAGAGGGATGATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336740.10
CDS CAA 90 bp GGGTCTGAGGGCCCCTGGGATTCTCAGAATAGAAGGCTCTGTCCCTaGGACAAGGCCAGCTGGTGTTACTTGGCTCCACAAGTGTTGATG +
Preference number: 6 (lower is better)
Translates to: GSEGPWDSQNRRLCP*DKASWCYLAPQVLM
Trigger: CATCAACACTTGTGGAGCCAAGTAACACCAGCTGGCCTTGTCCAAGGGACAGAGCCTTCTATTCTGAGAATCCCAGGGGCCCTCAGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
ENST00000506135.5
ENST00000513131.1
ENST00000514476.1
CDS TCA 72 bp CAAATCCTTCATCATCCTCACCAGCTCCCATGTCGGTaGTATAACGGGGTCCATAGCGGCCACTTCCCGCCT +
Preference number: 6 (lower is better)
Translates to: QILHHPHQLPCR*YNGVHSGHFPP
Trigger: AGGCGGGAAGTGGCCGCTATGGACCCCGTTATATCACCGACATGGGAGCTGGTGAGGATGATGAAGGATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
CDS GCA 72 bp TTTCCTGACTGGCCATCCCTAACGGCCTTAACTCGGTaGCACCGACCATCGTTGAAGGAGCCATTCACCATG +
Preference number: 6 (lower is better)
Translates to: FPDWPSLTALTR*HRPSLKEPFTM
Trigger: CATGGTGAATGGCTCCTTCAACGATGGTCGGTGGCACCGAGTTAAGGCCGTTAGGGATGGCCAGTCAGGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
ENST00000506135.5
ENST00000508131.5
ENST00000514476.1
CDS CCA 72 bp CTCCATCCTGCCTGGGATATGAATCATCCCTCTGTCTaGCATATCCGTGCTCCATATGCTCCCTGCCCCATG +
Preference number: 6 (lower is better)
Translates to: LHPAWDMNHPSV*HIRAPYAPCPM
Trigger: CATGGGGCAGGGAGCATATGGAGCACGGATATGCCAGACAGAGGGATGATTCATATCCCAGGCAGGATGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336740.10
ENST00000397202.6
CDS CCA 72 bp TGTCTGAGAAAATCGCAAGGTGCTGCTGAAGGCAGATaGAGAGGGGGTTACCTGAACACGAGGGCTCCATCC +
Preference number: 6 (lower is better)
Translates to: CLRKSQGAAEGR*RGGYLNTRAPS
Trigger: GGATGGAGCCCTCGTGTTCAGGTAACCCCCTCTCCATCTGCCTTCAGCAGCACCTTGCGATTTTCTCAGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508868.5
CDS CAA 72 bp TCCCTAACGGCCTTAACTCGGTGCCACCGACCATCGTaGAAGGAGCCATTCACCATGATGGATGCCACACCA +
Preference number: 6 (lower is better)
Translates to: SLTALTRCHRPS*KEPFTMMDATP
Trigger: TGGTGTGGCATCCATCATGGTGAATGGCTCCTTCAACGATGGTCGGTGGCACCGAGTTAAGGCCGTTAGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
ENST00000506135.5
ENST00000508131.5
ENST00000514476.1
CDS GCA 72 bp ATTCCATTCTTTGCTGTGCGAGATACACGAAGCTCGTaGCAGTTGCCCAGGGTGAGGGGATCTTCACTCCTG +
Preference number: 6 (lower is better)
Translates to: IPFFAVRDTRSS*QLPRVRGSSLL
Trigger: CAGGAGTGAAGATCCCCTCACCCTGGGCAACTGGCACGAGCTTCGTGTATCTCGCACAGCAAAGAATGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS GCA 72 bp CCGACCATCGTTGAAGGAGCCATTCACCATGATGGATaGCACACCACTGCCCAGGTTATAGCTGAACACGAG +
Preference number: 6 (lower is better)
Translates to: PTIVEGAIHHDG*HTTAQVIAEHE
Trigger: CTCGTGTTCAGCTATAACCTGGGCAGTGGTGTGGCATCCATCATGGTGAATGGCTCCTTCAACGATGGTCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
ENST00000506135.5
ENST00000508131.5
ENST00000514476.1
CDS CAA 72 bp TCTCCTCCCATTCACAGCGAGCGACTGCACACAGCCTaGAAAGCCTCGGTTTGTCCCTGTTGCTCTAACCAA +
Preference number: 6 (lower is better)
Translates to: SPPIHSERLHTA*KASVCPCCSNQ
Trigger: TTGGTTAGAGCAACAGGGACAAACCGAGGCTTTCAAGGCTGTGTGCAGTCGCTCGCTGTGAATGGGAGGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
CDS CAA 90 bp ATTTTCCACTGGATGCTGAAAGCCGTACAGTTCAATGCGCCCAGCTaGATGTCAAGAGGAGGCCCTACCTTGCCTGGTTTTCGGATGGCC +
Preference number: 6 (lower is better)
Translates to: IFHWMLKAVQFNAPS*MSRGGPTLPGFRMA
Trigger: GGCCATCCGAAAACCAGGCAAGGTAGGGCCTCCTCTTGACATCAAGCTGGGCGCATTGAACTGTACGGCTTTCAGCATCCAGTGGAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS TCA 72 bp TGTTCTGGCTCCATAGTCATCCACGGTTATCTTTCCTaGCTGGCCATCCCTAACGGCCTTAACTCGGTGCCA +
Preference number: 6 (lower is better)
Translates to: CSGSIVIHGYLS*LAIPNGLNSVP
Trigger: TGGCACCGAGTTAAGGCCGTTAGGGATGGCCAGTCAGGAAAGATAACCGTGGATGACTATGGAGCCAGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
ENST00000506135.5
ENST00000508131.5
ENST00000514476.1
CDS TCA 72 bp CTTCCACGAGGGAAATGTGGTAATCGGTGGACAGGGTaGAGTGAGAGATACAGCCCACGAGCCCTCTCATAT +
Preference number: 6 (lower is better)
Translates to: LPRGKCGNRWTG*SERYSPRALSY
Trigger: ATATGAGAGGGCTCGTGGGCTGTATCTCTCACTTCACCCTGTCCACCGATTACCACATTTCCCTCGTGGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
ENST00000506135.5
ENST00000513131.1
ENST00000514476.1
CDS TCA 72 bp ACAAGGCCAGCTGGTGTTACTTGGCTCCACAAGTGTTaGTGTTTTTCCCATCCACGGCATCTTCCACGAGGG +
Preference number: 6 (lower is better)
Translates to: TRPAGVTWLHKC*CFSHPRHLPRG
Trigger: CCCTCGTGGAAGATGCCGTGGATGGGAAAAACATCAACACTTGTGGAGCCAAGTAACACCAGCTGGCCTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
ENST00000506135.5
ENST00000513131.1
ENST00000514476.1
CDS TCA 72 bp AATAGCACACTGCCCTGCTCCATCCTGCCTGGGATATaGATCATCCCTCTGTCTGGCATATCCGTGCTCCAT +
Preference number: 6 (lower is better)
Translates to: NSTLPCSILPGI*IIPLSGISVLH
Trigger: ATGGAGCACGGATATGCCAGACAGAGGGATGATTCATATCCCAGGCAGGATGGAGCAGGGCAGTGTGCTATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336740.10
ENST00000397202.6
CDS GCA 72 bp CAGGGCCTGGATGCATGTTCTCTCAAGCCACCTGCATaGAGCGTATCTGTGTGCCAGATGTCTTCACACAAA +
Preference number: 6 (lower is better)
Translates to: QGLDACSLKPPA*SVSVCQMSSHK
Trigger: TTTGTGTGAAGACATCTGGCACACAGATACGCTGCATGCAGGTGGCTTGAGAGAACATGCATCCAGGCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336740.10
CDS CCA 72 bp TCTGGATCGAGGCCCTTGATAACCATGGAGTCCATCTaGATCCGCTCATGGATTGAGGTCCACTTCTTGTCG +
Preference number: 6 (lower is better)
Translates to: SGSRPLITMESI*IRSWIEVHFLS
Trigger: CGACAAGAAGTGGACCTCAATCCATGAGCGGATCCAGATGGACTCCATGGTTATCAAGGGCCTCGATCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS CCA 72 bp CAGAGCTCCATTGATGTTAAGCTGCCGCATCATGCCTaGGGATTTGCCTGTTCTGGCTCCATAGTCATCCAC +
Preference number: 6 (lower is better)
Translates to: QSSIDVKLPHHA*GFACSGSIVIH
Trigger: GTGGATGACTATGGAGCCAGAACAGGCAAATCCCCAGGCATGATGCGGCAGCTTAACATCAATGGAGCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
ENST00000506135.5
ENST00000508131.5
ENST00000513131.1
ENST00000514476.1
CDS CAA 72 bp TGGATGCTGAAAGCCGTACAGTTCAATGCGCCCAGCTaGATGTCAAGAGGAGGCCCTACCTTGCCTGGTTTT +
Preference number: 6 (lower is better)
Translates to: WMLKAVQFNAPS*MSRGGPTLPGF
Trigger: AAAACCAGGCAAGGTAGGGCCTCCTCTTGACATCAAGCTGGGCGCATTGAACTGTACGGCTTTCAGCATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS CAA 72 bp GACAAGGCCAGCTGGTGTTACTTGGCTCCACAAGTGTaGATGTTTTTCCCATCCACGGCATCTTCCACGAGG +
Preference number: 6 (lower is better)
Translates to: DKASWCYLAPQV*MFFPSTASSTR
Trigger: CCTCGTGGAAGATGCCGTGGATGGGAAAAACATCAACACTTGTGGAGCCAAGTAACACCAGCTGGCCTTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
ENST00000506135.5
ENST00000513131.1
ENST00000514476.1
CDS CAA 72 bp AGGCTCTGTCCCTTGGACAAGGCCAGCTGGTGTTACTaGGCTCCACAAGTGTTGATGTTTTTCCCATCCACG +
Preference number: 6 (lower is better)
Translates to: RLCPLDKASWCY*APQVLMFFPST
Trigger: CGTGGATGGGAAAAACATCAACACTTGTGGAGCCAAGTAACACCAGCTGGCCTTGTCCAAGGGACAGAGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
ENST00000506135.5
ENST00000513131.1
ENST00000514476.1
CDS CAA 90 bp CATGTCAATTCTCCTCCCATTCACAGCGAGCGACTGCACACAGCCTaGAAAGCCTCGGTTTGTCCCTGTTGCTCTAACCAACCAGTAAGC +
Preference number: 6 (lower is better)
Translates to: HVNSPPIHSERLHTA*KASVCPCCSNQPVS
Trigger: GCTTACTGGTTGGTTAGAGCAACAGGGACAAACCGAGGCTTTCAAGGCTGTGTGCAGTCGCTCGCTGTGAATGGGAGGAGAATTGACATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
CDS CAA 90 bp TGTCCCTTGGACAAGGCCAGCTGGTGTTACTTGGCTCCACAAGTGTaGATGTTTTTCCCATCCACGGCATCTTCCACGAGGGAAATGTGG +
Preference number: 6 (lower is better)
Translates to: CPLDKASWCYLAPQV*MFFPSTASSTREMW
Trigger: CCACATTTCCCTCGTGGAAGATGCCGTGGATGGGAAAAACATCAACACTTGTGGAGCCAAGTAACACCAGCTGGCCTTGTCCAAGGGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
ENST00000506135.5
ENST00000513131.1
ENST00000514476.1
CDS CAA 90 bp CAGAATAGAAGGCTCTGTCCCTTGGACAAGGCCAGCTGGTGTTACTaGGCTCCACAAGTGTTGATGTTTTTCCCATCCACGGCATCTTCC +
Preference number: 6 (lower is better)
Translates to: QNRRLCPLDKASWCY*APQVLMFFPSTASS
Trigger: GGAAGATGCCGTGGATGGGAAAAACATCAACACTTGTGGAGCCAAGTAACACCAGCTGGCCTTGTCCAAGGGACAGAGCCTTCTATTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
ENST00000506135.5
ENST00000513131.1
ENST00000514476.1
CDS GCA 72 bp GCCGCATTCTCCACATTCACTCCGGAGGTGAAGTCATaGTTCACATGGATGGTTCGGTCATTCAGGATGATC +
Preference number: 6 (lower is better)
Translates to: AAFSTFTPEVKS*FTWMVRSFRMI
Trigger: GATCATCCTGAATGACCGAACCATCCATGTGAAGCATGACTTCACCTCCGGAGTGAATGTGGAGAATGCGGC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS GCA 72 bp ATTCCACCCACATACAGAGCTCCATTGATGTTAAGCTaGCGCATCATGCCTGGGGATTTGCCTGTTCTGGCT +
Preference number: 6 (lower is better)
Translates to: IPPTYRAPLMLS*RIMPGDLPVLA
Trigger: AGCCAGAACAGGCAAATCCCCAGGCATGATGCGGCAGCTTAACATCAATGGAGCTCTGTATGTGGGTGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
ENST00000506135.5
ENST00000508131.5
ENST00000513131.1
ENST00000514476.1
CDS CCA 72 bp CCCTTGATAACCATGGAGTCCATCTGGATCCGCTCATaGATTGAGGTCCACTTCTTGTCGAAATCTGGCCTG +
Preference number: 6 (lower is better)
Translates to: PLITMESIWIRS*IEVHFLSKSGL
Trigger: CAGGCCAGATTTCGACAAGAAGTGGACCTCAATCCATGAGCGGATCCAGATGGACTCCATGGTTATCAAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS CCA 72 bp GCTTCAGGCTTCAGCCAATTCCAGCAGACTGTGTTCTaGCTCCCTTCTGAATCACTCTGGCATGATCTGCAA +
Preference number: 6 (lower is better)
Translates to: ASGFSQFQQTVF*LPSESLWHDLQ
Trigger: TTGCAGATCATGCCAGAGTGATTCAGAAGGGAGCCAGAACACAGTCTGCTGGAATTGGCTGAAGCCTGAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508868.5
CDS CAA 90 bp GCATGCAGCGTATCTGTGTGCCAGATGTCTTCACACAAAAGGCCCTaGAGGACAGCTCCTTCCTCTTGTCTCTATCTTTGTACAGCAAGC +
Preference number: 6 (lower is better)
Translates to: ACSVSVCQMSSHKRP*RTAPSSCLYLCTAS
Trigger: GCTTGCTGTACAAAGATAGAGACAAGAGGAAGGAGCTGTCCTCAAGGGCCTTTTGTGTGAAGACATCTGGCACACAGATACGCTGCATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336740.10
ENST00000397202.6
CDS CCA 72 bp ATTCATTGCCCTCACGGCAAACTGGTAGTTGGTATCTaGATCGAGGCCCTTGATAACCATGGAGTCCATCTG +
Preference number: 6 (lower is better)
Translates to: IHCPHGKLVVGI*IEALDNHGVHL
Trigger: CAGATGGACTCCATGGTTATCAAGGGCCTCGATCCAGATACCAACTACCAGTTTGCCGTGAGGGCAATGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS CAA 90 bp GGACAGGGTGAAGTGAGAGATACAGCCCACGAGCCCTCTCATATATaGCCTGTTAGTGTGCAGAGCAATTTCCTTCATTCCACCCACATA +
Preference number: 6 (lower is better)
Translates to: GQGEVRDTAHEPSHI*PVSVQSNFLHSTHI
Trigger: TATGTGGGTGGAATGAAGGAAATTGCTCTGCACACTAACAGGCAATATATGAGAGGGCTCGTGGGCTGTATCTCTCACTTCACCCTGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
ENST00000506135.5
ENST00000513131.1
ENST00000514476.1
CDS CAA 90 bp TGTCAAATCCCAATTACTCTGGTTGCAGATCACTTGAAGCCAGCCTaGTTTCTCTCACAAAGCTCTGCCCGAGAGTCCAGAACGTCCTCT +
Preference number: 6 (lower is better)
Translates to: CQIPITLVADHLKPA*FLSQSSARESRTSS
Trigger: AGAGGACGTTCTGGACTCTCGGGCAGAGCTTTGTGAGAGAAACAAGGCTGGCTTCAAGTGATCTGCAACCAGAGTAATTGGGATTTGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508868.5
CDS TCA 72 bp GATAACCATGGAGTCCATCTGGATCCGCTCATGGATTaGGGTCCACTTCTTGTCGAAATCTGGCCTGATGAA +
Preference number: 6 (lower is better)
Translates to: DNHGVHLDPLMD*GPLLVEIWPDE
Trigger: TTCATCAGGCCAGATTTCGACAAGAAGTGGACCTCAATCCATGAGCGGATCCAGATGGACTCCATGGTTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322350.10
ENST00000354891.7
CDS TCA 72 bp GCCTGTGTCATAGCTGTACAGGAGGACACCATCTCCTaGGTCTGGCCGAAATGTGATCTCAAATTCCATGAA +
Preference number: 6 (lower is better)
Translates to: ACVIAVQEDTIS*VWPKCDLKFHE
Trigger: TTCATGGAATTTGAGATCACATTTCGGCCAGACTCAGGAGATGGTGTCCTCCTGTACAGCTATGACACAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS TCA 72 bp TCCCTTCTGAATCACTCTGGCATGATCTGCAATGTCTaGGAAAATCGCAAGGTGCTGCTGAAGGCAGATGGA +
Preference number: 6 (lower is better)
Translates to: SLLNHSGMICNV*ENRKVLLKADG
Trigger: TCCATCTGCCTTCAGCAGCACCTTGCGATTTTCTCAGACATTGCAGATCATGCCAGAGTGATTCAGAAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508868.5
CDS TCA 72 bp TGGTCTACTGAGGAAGACAAAAAGTCAAACTGTGAATaGCAACACAGTGCCAGCACTCCACGGCGAAGACCA +
Preference number: 6 (lower is better)
Translates to: WSTEEDKKSNCE*QHSASTPRRRP
Trigger: TGGTCTTCGCCGTGGAGTGCTGGCACTGTGTTGTCATTCACAGTTTGACTTTTTGTCTTCCTCAGTAGACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000513131.1
CDS GCA 72 bp CAGCCCACGAGCCCTCTCATATATTGCCTGTTAGTGTaGAGAGCAATTTCCTTCATTCCACCCACATACAGA +
Preference number: 6 (lower is better)
Translates to: QPTSPLIYCLLV*RAISFIPPTYR
Trigger: TCTGTATGTGGGTGGAATGAAGGAAATTGCTCTGCACACTAACAGGCAATATATGAGAGGGCTCGTGGGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
ENST00000506135.5
ENST00000513131.1
ENST00000514476.1
CDS GCA 72 bp CTTATATCCCTCTCCTGGATTGGATCTTCTGTTTCCTaGAGCTTTGGTCCTGCGTCATGGTTCTGTCCAAGT +
Preference number: 6 (lower is better)
Translates to: LISLSWIGSSVS*SFGPASWFCPS
Trigger: ACTTGGACAGAACCATGACGCAGGACCAAAGCTGCAGGAAACAGAAGATCCAATCCAGGAGAGGGATATAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504709.1
CDS CCA 72 bp TCCACATTCACTCCGGAGGTGAAGTCATGCTTCACATaGATGGTTCGGTCATTCAGGATGATCTTCTGGATG +
Preference number: 6 (lower is better)
Translates to: STFTPEVKSCFT*MVRSFRMIFWM
Trigger: CATCCAGAAGATCATCCTGAATGACCGAACCATCCATGTGAAGCATGACTTCACCTCCGGAGTGAATGTGGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
CDS CAA 72 bp GCAATTTCCTTCATTCCACCCACATACAGAGCTCCATaGATGTTAAGCTGCCGCATCATGCCTGGGGATTTG +
Preference number: 6 (lower is better)
Translates to: AISFIPPTYRAP*MLSCRIMPGDL
Trigger: CAAATCCCCAGGCATGATGCGGCAGCTTAACATCAATGGAGCTCTGTATGTGGGTGGAATGAAGGAAATTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
ENST00000506135.5
ENST00000508131.5
ENST00000513131.1
ENST00000514476.1
CDS CAA 72 bp TTCACACAAAAGGCCCTTGAGGACAGCTCCTTCCTCTaGTCTCTATCTTTGTACAGCAAGCAGTCCCCCTTA +
Preference number: 6 (lower is better)
Translates to: FTQKALEDSSFL*SLSLYSKQSPL
Trigger: TAAGGGGGACTGCTTGCTGTACAAAGATAGAGACAAGAGGAAGGAGCTGTCCTCAAGGGCCTTTTGTGTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336740.10
ENST00000397202.6
CDS CAA 90 bp TTTCACAGTCCTTGTCAAATCCCAATTACTCTGGTTGCAGATCACTaGAAGCCAGCCTTGTTTCTCTCACAAAGCTCTGCCCGAGAGTCC +
Preference number: 6 (lower is better)
Translates to: FHSPCQIPITLVADH*KPALFLSQSSARES
Trigger: GGACTCTCGGGCAGAGCTTTGTGAGAGAAACAAGGCTGGCTTCAAGTGATCTGCAACCAGAGTAATTGGGATTTGACAAGGACTGTGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397210.7
ENST00000508868.5
CDS TCA 72 bp CTTGTCAAATCCCAATTACTCTGGTTGCAGATCACTTaGAGCCAGCCTTGTTTCTCTCACAAAGCTCTGCCC +
Preference number: 6 (lower is better)
Translates to: LVKSQLLWLQIT*SQPCFSHKALP
Trigger: GGGCAGAGCTTTGTGAGAGAAACAAGGCTGGCTTCAAGTGATCTGCAACCAGAGTAATTGGGATTTGACAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397210.7
ENST00000508868.5
CDS TCA 72 bp TGTTGGAAAGAAAGACCAGGAGCTTCCAATAAGCCTTaGAGCTTCAGGCTTCAGCCAATTCCAGCAGACTGT +
Preference number: 6 (lower is better)
Translates to: CWKERPGASNKP*SFRLQPIPADC
Trigger: ACAGTCTGCTGGAATTGGCTGAAGCCTGAAGCTTCAAGGCTTATTGGAAGCTCCTGGTCTTTCTTTCCAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508868.5
CDS GCA 72 bp TTAAACCTGGATGCATGTTCTCTCAAGCCACCTGCATaGAGCGTATCTGTGTGCCAGATGTCTTCACACAAA +
Preference number: 6 (lower is better)
Translates to: LNLDACSLKPPA*SVSVCQMSSHK
Trigger: TTTGTGTGAAGACATCTGGCACACAGATACGCTGCATGCAGGTGGCTTGAGAGAACATGCATCCAGGTTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000397202.6
CDS CCA 72 bp ATTATTCTGGGGACTTCTTATATCCCTCTCCTGGATTaGATCTTCTGTTTCCTGCAGCTTTGGTCCTGCGTC +
Preference number: 6 (lower is better)
Translates to: IILGTSYIPLLD*IFCFLQLWSCV
Trigger: GACGCAGGACCAAAGCTGCAGGAAACAGAAGATCCAATCCAGGAGAGGGATATAAGAAGTCCCCAGAATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504709.1
CDS CAA 72 bp GAAGTGAGAGATACAGCCCACGAGCCCTCTCATATATaGCCTGTTAGTGTGCAGAGCAATTTCCTTCATTCC +
Preference number: 6 (lower is better)
Translates to: EVRDTAHEPSHI*PVSVQSNFLHS
Trigger: GGAATGAAGGAAATTGCTCTGCACACTAACAGGCAATATATGAGAGGGCTCGTGGGCTGTATCTCTCACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000322350.10
ENST00000336740.10
ENST00000354891.7
ENST00000397202.6
ENST00000397210.7
ENST00000506135.5
ENST00000513131.1
ENST00000514476.1
CDS CAA 72 bp GCCCTTGAGGACAGCTCCTTCCTCTTGTCTCTATCTTaGTACAGCAAGCAGTCCCCCTTATCTGTATTTTTG +
Preference number: 6 (lower is better)
Translates to: ALEDSSFLLSLS*YSKQSPLSVFL
Trigger: CAAAAATACAGATAAGGGGGACTGCTTGCTGTACAAAGATAGAGACAAGAGGAAGGAGCTGTCCTCAAGGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336740.10
ENST00000397202.6
CDS CAA 72 bp CCTTGTCAAATCCCAATTACTCTGGTTGCAGATCACTaGAAGCCAGCCTTGTTTCTCTCACAAAGCTCTGCC +
Preference number: 6 (lower is better)
Translates to: PCQIPITLVADH*KPALFLSQSSA
Trigger: GGCAGAGCTTTGTGAGAGAAACAAGGCTGGCTTCAAGTGATCTGCAACCAGAGTAATTGGGATTTGACAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397210.7
ENST00000508868.5
CDS GCA 72 bp CTTTCACAGTCCTTGTCAAATCCCAATTACTCTGGTTaGAGATCACTTGAAGCCAGCCTTGTTTCTCTCACA +
Preference number: 6 (lower is better)
Translates to: LSQSLSNPNYSG*RSLEASLVSLT
Trigger: TGTGAGAGAAACAAGGCTGGCTTCAAGTGATCTGCAACCAGAGTAATTGGGATTTGACAAGGACTGTGAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000397210.7
ENST00000508868.5
CDS CCA 72 bp AAAGCAAAAAGCAAATGTGTGGCCCTCAGGAGCCTGTaGTCTACTGAGGAAGACAAAAAGTCAAACTGTGAA +
Preference number: 6 (lower is better)
Translates to: KAKSKCVALRSL*STEEDKKSNCE
Trigger: TTCACAGTTTGACTTTTTGTCTTCCTCAGTAGACCACAGGCTCCTGAGGGCCACACATTTGCTTTTTGCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000513131.1
CDS CCA 72 bp GATAAACTGCGGGATCTCAATGGCTTCTATGATCGCTaGGACAGAACAGAAAAAGGAGGTTACATAGTATGT +
Preference number: 6 (lower is better)
Translates to: DKLRDLNGFYDR*DRTEKGGYIVC
Trigger: ACATACTATGTAACCTCCTTTTTCTGTTCTGTCCCAGCGATCATAGAAGCCATTGAGATCCCGCAGTTTATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514476.1