RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EGFL7 (Homo sapiens)

Ensembl gene IDs: ENSG00000172889

Ensembl transcript IDs: ENST00000308874.12, ENST00000371698.3, ENST00000371699.5, ENST00000406555.7, ENST00000490469.5, ENST00000492002.1, ENST00000492862.6

Found 327 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGGTGGATTCACAGAGAAGATCCCAGCCCATCCCATGCCAGGGTCTaGGGAGCCTCCCGAGGAAGGGGAGGAGGAAGAGGAGGAAGGCCC +
Preference number: 1 (lower is better)
Translates to: GWIHREDPSPSHARV*GASRGRGGGRGGRP
Trigger: GGGCCTTCCTCCTCTTCCTCCTCCCCTTCCTCGGGAGGCTCCCCAGACCCTGGCATGGGATGGGCTGGGATCTTCTCTGTGAATCCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
3UTR-3UTR CCA 90 bp GGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTGAGGAAGGCCCTGCCTaGCCTTCCGCTCAGTCACCC +
Preference number: 2 (lower is better)
Translates to: GSQAPAGSSYLPSAEGPPEEGPA*PSAQSP
Trigger: GGGTGACTGAGCGGAAGGCCAGGCAGGGCCTTCCTC...AGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
3UTR-3UTR CCA 90 bp GCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTGGCCTTGGGATGCCGTCCCATGCCAGGGTCTaGGGAGCCTCCCGAGGAAGG +
Preference number: 2 (lower is better)
Translates to: AGSSYLPSAEGPPGLGMPSHARV*GASRGR
Trigger: CCTTCCTCGGGAGGCTCCCCAGACCCTGGCATGGGA...CGGCATCCCAAGGCCAGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
3UTR-3UTR CCA 90 bp GCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTGGCCTTGGGATGCCGCCCCGAGGTGGTTTCTaGACCCCCAGCATGTTGGGC +
Preference number: 2 (lower is better)
Translates to: AGSSYLPSAEGPPGLGMPPRGGF*TPSMLG
Trigger: GCCCAACATGCTGGGGGTCCAGAAACCACCTCGGGG...CGGCATCCCAAGGCCAGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
3UTR-3UTR CCA 90 bp GGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTCCCCGAGGTGGTTTCTaGACCCCCAGCATGTTGGGC +
Preference number: 2 (lower is better)
Translates to: GSQAPAGSSYLPSAEGPPPRGGF*TPSMLG
Trigger: GCCCAACATGCTGGGGGTCCAGAAACCACCTCGGGG...AGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
3UTR-3UTR CCA 90 bp GGAGCCTCCCGAGGAAGGGGAGGAGGAAGAGGAGGAAGGCCCTGCCTGGCCTTCCCCCGAGGTGGTTTCTaGACCCCCAGCATGTTGGGC +
Preference number: 2 (lower is better)
Translates to: GASRGRGGGRGGRPCLAFPRGGF*TPSMLG
Trigger: GCCCAACATGCTGGGGGTCCAGAAACCACCTCGGGG...GAAGGCCAGGCAGGGCCTTCCTCCTCTTCCTCCTCCCCTTCCTCGGGAGGCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
3UTR-3UTR CCA 90 bp TGGCCTGTGCCATGGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCGAGGAAGGCCCTGCCTaGCCTTCCGCTCAGTCACCC +
Preference number: 2 (lower is better)
Translates to: WPVPWVPGSSRELVPSLSEEGPA*PSAQSP
Trigger: GGGTGACTGAGCGGAAGGCCAGGCAGGGCCTTCCTC...GCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCCATGGCACAGGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
3UTR-3UTR CCA 90 bp CAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTGGCCTTGGGATGCCGTGAGGAAGGCCCTGCCTaGCCTTCCGCTCAGTCACCC +
Preference number: 2 (lower is better)
Translates to: QGARTFPQLRAHLALGCREEGPA*PSAQSP
Trigger: GGGTGACTGAGCGGAAGGCCAGGCAGGGCCTTCCTC...ACGGCATCCCAAGGCCAGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
3UTR-3UTR CCA 90 bp GGCCTGTGCCATGGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTTCCCATGCCAGGGTCTaGGGAGCCTCCCGAGGAAGG +
Preference number: 2 (lower is better)
Translates to: GLCHGSQAPAGSSYLPSASHARV*GASRGR
Trigger: CCTTCCTCGGGAGGCTCCCCAGACCCTGGCATGGGA...AGCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCCATGGCACAGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
3UTR-3UTR GCA 90 bp CTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTGGCCTTGGGAAGAGGAGGAAGGCCCTaGCTGGCCTTCCGCTCAGTC +
Preference number: 2 (lower is better)
Translates to: LQQGARTFPQLRAHLALGRGGRP*LAFRSV
Trigger: GACTGAGCGGAAGGCCAGGCAGGGCCTTCCTCCTCT...TCCCAAGGCCAGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTGCTGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
3UTR-3UTR GCA 90 bp TGCCATGGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCAGAGGAGGAAGGCCCTaGCTGGCCTTCCGCTCAGTC +
Preference number: 2 (lower is better)
Translates to: CHGSQAPAGSSYLPSAEGRGGRP*LAFRSV
Trigger: GACTGAGCGGAAGGCCAGGCAGGGCCTTCCTCCTCT...GCCCTCAGCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCCATGGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
3UTR-3UTR CCA 90 bp CAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTGGCCTTGGGATGCCGTCCCCGAGGTGGTTTCTaGACCCCCAGCATGTTGGGC +
Preference number: 2 (lower is better)
Translates to: QGARTFPQLRAHLALGCRPRGGF*TPSMLG
Trigger: GCCCAACATGCTGGGGGTCCAGAAACCACCTCGGGG...ACGGCATCCCAAGGCCAGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
3UTR-3UTR CCA 90 bp TGTGCCATGGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGAGGTCCCATGCCAGGGTCTaGGGAGCCTCCCGAGGAAGG +
Preference number: 2 (lower is better)
Translates to: CAMGPRLQQGARTFPQLRSHARV*GASRGR
Trigger: CCTTCCTCGGGAGGCTCCCCAGACCCTGGCATGGGA...CCTCAGCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCCATGGCACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
3UTR-3UTR GCA 90 bp GGGGGTAGCCAGGGGTGGATTCACAGAGAAGATCCCAGCCCATCCCATGCCAGGAGAGGAGGAAGGCCCTaGCTGGCCTTCCGCTCAGTC +
Preference number: 2 (lower is better)
Translates to: GGSQGWIHREDPSPSHARRGGRP*LAFRSV
Trigger: GACTGAGCGGAAGGCCAGGCAGGGCCTTCCTCCTCT...CCTGGCATGGGATGGGCTGGGATCTTCTCTGTGAATCCACCCCTGGCTACCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
3UTR-3UTR CCA 90 bp GGCCTGTGCCATGGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGGGGGTAGCCAGGGGTaGATTCACAGAGAAGATCCC +
Preference number: 2 (lower is better)
Translates to: GLCHGSQAPAGSSYLPSAGGSQG*IHREDP
Trigger: GGGATCTTCTCTGTGAATCCACCCCTGGCTACCCCC...AGCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCCATGGCACAGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
3UTR-3UTR CCA 90 bp TGTGCCATGGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGAGGTCAGTCACCCCGAGGTaGTTTCTGGACCCCCAGCAT +
Preference number: 2 (lower is better)
Translates to: CAMGPRLQQGARTFPQLRSVTPR*FLDPQH
Trigger: ATGCTGGGGGTCCAGAAACCACCTCGGGGTGACTGA...CCTCAGCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCCATGGCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
3UTR-3UTR CCA 90 bp TGTGCCATGGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGGGGGTAGCCAGGGGTaGATTCACAGAGAAGATCCC +
Preference number: 2 (lower is better)
Translates to: CAMGPRLQQGARTFPQLRGGSQG*IHREDP
Trigger: GGGATCTTCTCTGTGAATCCACCCCTGGCTACCCCC...CCTCAGCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCCATGGCACA
62% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
3UTR-3UTR CAA 90 bp TGGCCTGTGCCATGGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCAGGGCCCACCTGGCCTaGGGATGCCGTTGGGGTAGC +
Preference number: 3 (lower is better)
Translates to: WPVPWVPGSSRELVPSLSRAHLA*GCRWGS
Trigger: GCTACCCCAACGGCATCCCAAGGCCAGGTGGGCCCT...GCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCCATGGCACAGGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
3UTR GCA 72 bp TCCCGAGGAAGGGGAGGAGGAAGAGGAGGAAGGCCCTaGCTGGCCTTCCGCTCAGTCACCCCGAGGTGGTTT +
Preference number: 3 (lower is better)
Translates to: SRGRGGGRGGRP*LAFRSVTPRWF
Trigger: AAACCACCTCGGGGTGACTGAGCGGAAGGCCAGGCAGGGCCTTCCTCCTCTTCCTCCTCCCCTTCCTCGGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
3UTR CCA 72 bp GAGGAAGGGGAGGAGGAAGAGGAGGAAGGCCCTGCCTaGCCTTCCGCTCAGTCACCCCGAGGTGGTTTCTGG +
Preference number: 3 (lower is better)
Translates to: EEGEEEEEEGPA*PSAQSPRGGFW
Trigger: CCAGAAACCACCTCGGGGTGACTGAGCGGAAGGCCAGGCAGGGCCTTCCTCCTCTTCCTCCTCCCCTTCCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp GGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTACGCGTAGCGAGGCCTaGCAGGGGCCAGCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: GSQAPAGSSYLPSAEGPPTRSEA*QGPAQG
Trigger: GCCCTGGGCTGGCCCCTGCCAGGCCTCGCTACGCGT...AGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp GCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTGGCCTTGGGATGCCGACGCGTAGCGAGGCCTaGCAGGGGCCAGCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: AGSSYLPSAEGPPGLGMPTRSEA*QGPAQG
Trigger: GCCCTGGGCTGGCCCCTGCCAGGCCTCGCTACGCGT...CGGCATCCCAAGGCCAGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR GCA 90 bp GCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTGGCCTTGGGATGCCGGCCCCTCATGGCCTGTaGCTCCAGGCGGGGTGGCCT +
Preference number: 4 (lower is better)
Translates to: AGSSYLPSAEGPPGLGMPAPHGL*LQAGWP
Trigger: AGGCCACCCCGCCTGGAGGCACAGGCCATGAGGGGC...CGGCATCCCAAGGCCAGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR GCA 90 bp CCTCCCGAGGAAGGGGAGGAGGAAGAGGAGGAAGGCCCTGCCTGGCCTTCCGCTGTGCTGCAGGCCCGGTaGCCGTCGCAGGTGGTGAGG +
Preference number: 4 (lower is better)
Translates to: PPEEGEEEEEEGPAWPSAVLQAR*PSQVVR
Trigger: CCTCACCACCTGCGACGGGCACCGGGCCTGCAGCAC...AGCGGAAGGCCAGGCAGGGCCTTCCTCCTCTTCCTCCTCCCCTTCCTCGGGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR GCA 90 bp CCCGAGGAAGGGGAGGAGGAAGAGGAGGAAGGCCCTGCCTGGCCTTCCGCTCAGGGGCCAGCCCAGGGCTaGGGCGGTAGGCGGTCCTAT +
Preference number: 4 (lower is better)
Translates to: PEEGEEEEEEGPAWPSAQGPAQG*GGRRSY
Trigger: ATAGGACCGCCTACCGCCGCAGCCCTGGGCTGGCCC...CTGAGCGGAAGGCCAGGCAGGGCCTTCCTCCTCTTCCTCCTCCCCTTCCTCGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR GCA 90 bp GCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTGGCCTTGGGATGCCGGGGCCAGCCCAGGGCTaGGGCGGTAGGCGGTCCTAT +
Preference number: 4 (lower is better)
Translates to: AGSSYLPSAEGPPGLGMPGPAQG*GGRRSY
Trigger: ATAGGACCGCCTACCGCCGCAGCCCTGGGCTGGCCC...CGGCATCCCAAGGCCAGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR GCA 90 bp CCCGAGGAAGGGGAGGAGGAAGAGGAGGAAGGCCCTGCCTGGCCTTCCGCTCAGGGGTCCGGGAGCCCATaGTCCAGTGCCTGCGAGGCC +
Preference number: 4 (lower is better)
Translates to: PEEGEEEEEEGPAWPSAQGSGSP*SSACEA
Trigger: GGCCTCGCAGGCACTGGAGCATGGGCTCCCGGACCC...CTGAGCGGAAGGCCAGGCAGGGCCTTCCTCCTCTTCCTCCTCCCCTTCCTCGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp CAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTGGCCTTGGGATGCCGTGGCCCACTGGCCGCCTaGAGGCACCTCCTGAGGCCC +
Preference number: 4 (lower is better)
Translates to: QGARTFPQLRAHLALGCRGPLAA*RHLLRP
Trigger: GGGCCTCAGGAGGTGCCTCCAGGCGGCCAGTGGGCC...ACGGCATCCCAAGGCCAGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308874.12
ENST00000406555.7
CDS-3UTR CCA 90 bp GGCCTGTGCCATGGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGGCCCACTGGCCGCCTaGAGGCACCTCCTGAGGCCC +
Preference number: 4 (lower is better)
Translates to: GLCHGSQAPAGSSYLPSAGPLAA*RHLLRP
Trigger: GGGCCTCAGGAGGTGCCTCCAGGCGGCCAGTGGGCC...AGCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCCATGGCACAGGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308874.12
ENST00000406555.7
CDS-3UTR CCA 90 bp CAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTGGCCTTGGGATGCCGTGGGCCTCAGGCCCACTaGCCGCCTGGAGGCACCTCC +
Preference number: 4 (lower is better)
Translates to: QGARTFPQLRAHLALGCRGPQAH*PPGGTS
Trigger: GGAGGTGCCTCCAGGCGGCCAGTGGGCCTGAGGCCC...ACGGCATCCCAAGGCCAGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308874.12
ENST00000406555.7
CDS-3UTR CCA 90 bp GGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTTGCTCCTCCGGGTGGTaGGGGCCACCTGTGCCTCCC +
Preference number: 4 (lower is better)
Translates to: GSQAPAGSSYLPSAEGPPCSSGW*GPPVPP
Trigger: GGGAGGCACAGGTGGCCCCCACCACCCGGAGGAGCA...AGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308874.12
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp GGCCTGTGCCATGGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTACGCGTAGCGAGGCCTaGCAGGGGCCAGCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: GLCHGSQAPAGSSYLPSATRSEA*QGPAQG
Trigger: GCCCTGGGCTGGCCCCTGCCAGGCCTCGCTACGCGT...AGCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCCATGGCACAGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp GCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTGGCCTTGGGATGCCGCCCCAGGAAGCCCGCTaGTCCTCTTCCAGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: AGSSYLPSAEGPPGLGMPPQEAR*SSSSRG
Trigger: GCCCCGGCTGGAAGAGGACCAGCGGGCTTCCTGGGG...CGGCATCCCAAGGCCAGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp GGAGCCTCCCGAGGAAGGGGAGGAGGAAGAGGAGGAAGGCCCTGCCTGGCCTTCCCCCAGGAAGCCCGCTaGTCCTCTTCCAGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: GASRGRGGGRGGRPCLAFPQEAR*SSSSRG
Trigger: GCCCCGGCTGGAAGAGGACCAGCGGGCTTCCTGGGG...GAAGGCCAGGCAGGGCCTTCCTCCTCTTCCTCCTCCCCTTCCTCGGGAGGCTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp GGAGCCTCCCGAGGAAGGGGAGGAGGAAGAGGAGGAAGGCCCTGCCTGGCCTTCGTGCCTCCCCGGTCCTaGGGGCTGCTTCCCAGAGCG +
Preference number: 4 (lower is better)
Translates to: GASRGRGGGRGGRPCLAFVPPRS*GLLPRA
Trigger: CGCTCTGGGAAGCAGCCCCCAGGACCGGGGAGGCAC...GAAGGCCAGGCAGGGCCTTCCTCCTCTTCCTCCTCCCCTTCCTCGGGAGGCTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371699.5
CDS-3UTR TCA 90 bp GGAGCCTCCCGAGGAAGGGGAGGAGGAAGAGGAGGAAGGCCCTGCCTGGCCTTCGAGACAGGGTCCCCGTaGGCCCGGACAGCACACACC +
Preference number: 4 (lower is better)
Translates to: GASRGRGGGRGGRPCLAFETGSP*ARTAHT
Trigger: GGTGTGTGCTGTCCGGGCTCACGGGGACCCTGTCTC...GAAGGCCAGGCAGGGCCTTCCTCCTCTTCCTCCTCCCCTTCCTCGGGAGGCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR TCA 90 bp GCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTGGCCTTGGGATGCCGGAGACAGGGTCCCCGTaGGCCCGGACAGCACACACC +
Preference number: 4 (lower is better)
Translates to: AGSSYLPSAEGPPGLGMPETGSP*ARTAHT
Trigger: GGTGTGTGCTGTCCGGGCTCACGGGGACCCTGTCTC...CGGCATCCCAAGGCCAGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR TCA 90 bp CCTCCCGAGGAAGGGGAGGAGGAAGAGGAGGAAGGCCCTGCCTGGCCTTCCGCTAACTGCCGGCGGTGTTaGCGCAGCGCTGGGGACAGC +
Preference number: 4 (lower is better)
Translates to: PPEEGEEEEEEGPAWPSANCRRC*RSAGDS
Trigger: GCTGTCCCCAGCGCTGCGTCAACACCGCCGGCAGTT...AGCGGAAGGCCAGGCAGGGCCTTCCTCCTCTTCCTCCTCCCCTTCCTCGGGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR TCA 90 bp CCCGAGGAAGGGGAGGAGGAAGAGGAGGAAGGCCCTGCCTGGCCTTCCGCTCAGAACTGCCGGCGGTGTTaGCGCAGCGCTGGGGACAGC +
Preference number: 4 (lower is better)
Translates to: PEEGEEEEEEGPAWPSAQNCRRC*RSAGDS
Trigger: GCTGTCCCCAGCGCTGCGTCAACACCGCCGGCAGTT...CTGAGCGGAAGGCCAGGCAGGGCCTTCCTCCTCTTCCTCCTCCCCTTCCTCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR TCA 90 bp GCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTGGCCTTGGGATGCCGAACTGCCGGCGGTGTTaGCGCAGCGCTGGGGACAGC +
Preference number: 4 (lower is better)
Translates to: AGSSYLPSAEGPPGLGMPNCRRC*RSAGDS
Trigger: GCTGTCCCCAGCGCTGCGTCAACACCGCCGGCAGTT...CGGCATCCCAAGGCCAGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR TCA 90 bp GGAGCCTCCCGAGGAAGGGGAGGAGGAAGAGGAGGAAGGCCCTGCCTGGCCTTCAACTGCCGGCGGTGTTaGCGCAGCGCTGGGGACAGC +
Preference number: 4 (lower is better)
Translates to: GASRGRGGGRGGRPCLAFNCRRC*RSAGDS
Trigger: GCTGTCCCCAGCGCTGCGTCAACACCGCCGGCAGTT...GAAGGCCAGGCAGGGCCTTCCTCCTCTTCCTCCTCCCCTTCCTCGGGAGGCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR GCA 90 bp GGCCTGTGCCATGGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGACAGGGGCAGGAGCTaGTCCTCCGGGTGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: GLCHGSQAPAGSSYLPSADRGRS*SSGWWG
Trigger: CCCCCACCACCCGGAGGAGCAGCTCCTGCCCCTGTC...AGCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCCATGGCACAGGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308874.12
ENST00000371699.5
ENST00000406555.7
CDS-3UTR GCA 90 bp GGCCTGTGCCATGGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGCCCCTCATGGCCTGTaGCTCCAGGCGGGGTGGCCT +
Preference number: 4 (lower is better)
Translates to: GLCHGSQAPAGSSYLPSAAPHGL*LQAGWP
Trigger: AGGCCACCCCGCCTGGAGGCACAGGCCATGAGGGGC...AGCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCCATGGCACAGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR GCA 90 bp TGGCCTGTGCCATGGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCGTGCTGCAGGCCCGGTaGCCGTCGCAGGTGGTGAGG +
Preference number: 4 (lower is better)
Translates to: WPVPWVPGSSRELVPSLSVLQAR*PSQVVR
Trigger: CCTCACCACCTGCGACGGGCACCGGGCCTGCAGCAC...GCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCCATGGCACAGGCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR GCA 90 bp AAGGCCCTGCCTGGCCTTCCGCTCAGTCACCCCGAGGTGGTTTCTGGACCCCCAGTGCTGCAGGCCCGGTaGCCGTCGCAGGTGGTGAGG +
Preference number: 4 (lower is better)
Translates to: KALPGLPLSHPEVVSGPPVLQAR*PSQVVR
Trigger: CCTCACCACCTGCGACGGGCACCGGGCCTGCAGCAC...TGGGGGTCCAGAAACCACCTCGGGGTGACTGAGCGGAAGGCCAGGCAGGGCCTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR GCA 90 bp GGCCTGTGCCATGGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGGGCCAGCCCAGGGCTaGGGCGGTAGGCGGTCCTAT +
Preference number: 4 (lower is better)
Translates to: GLCHGSQAPAGSSYLPSAGPAQG*GGRRSY
Trigger: ATAGGACCGCCTACCGCCGCAGCCCTGGGCTGGCCC...AGCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCCATGGCACAGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR GCA 90 bp GGCCTGTGCCATGGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGGGTCCGGGAGCCCATaGTCCAGTGCCTGCGAGGCC +
Preference number: 4 (lower is better)
Translates to: GLCHGSQAPAGSSYLPSAGSGSP*SSACEA
Trigger: GGCCTCGCAGGCACTGGAGCATGGGCTCCCGGACCC...AGCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCCATGGCACAGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR GCA 90 bp CCCGAGGAAGGGGAGGAGGAAGAGGAGGAAGGCCCTGCCTGGCCTTCCGCTCAGAGTGCACCAGGAGGCTaGCGGGGTCCGGGAGCCCAT +
Preference number: 4 (lower is better)
Translates to: PEEGEEEEEEGPAWPSAQSAPGG*RGPGAH
Trigger: ATGGGCTCCCGGACCCCGGCAGCCTCCTGGTGCACT...CTGAGCGGAAGGCCAGGCAGGGCCTTCCTCCTCTTCCTCCTCCCCTTCCTCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp TGTGCCATGGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGGGCCTCAGGCCCACTaGCCGCCTGGAGGCACCTCC +
Preference number: 4 (lower is better)
Translates to: CAMGPRLQQGARTFPQLRGPQAH*PPGGTS
Trigger: GGAGGTGCCTCCAGGCGGCCAGTGGGCCTGAGGCCC...CCTCAGCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCCATGGCACA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000308874.12
ENST00000406555.7
CDS-3UTR CCA 90 bp GGAGCCTCCCGAGGAAGGGGAGGAGGAAGAGGAGGAAGGCCCTGCCTGGCCTTCCAGGCGTGGCCATGGTaGCCGCTGCTGTGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: GASRGRGGGRGGRPCLAFQAWPW*PLLCPG
Trigger: CCCAGGACACAGCAGCGGCCACCATGGCCACGCCTG...GAAGGCCAGGCAGGGCCTTCCTCCTCTTCCTCCTCCCCTTCCTCGGGAGGCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308874.12
ENST00000406555.7
CDS-3UTR CCA 90 bp GCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTGGCCTTGGGATGCCGGCCCAGGCGTGGCCATaGTGGCCGCTGCTGTGTCCT +
Preference number: 4 (lower is better)
Translates to: AGSSYLPSAEGPPGLGMPAQAWP*WPLLCP
Trigger: AGGACACAGCAGCGGCCACCATGGCCACGCCTGGGC...CGGCATCCCAAGGCCAGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308874.12
ENST00000406555.7
CDS-3UTR CCA 90 bp CTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTGGCCTTGGGATGCTCCTCCGGGTGGTaGGGGCCACCTGTGCCTCCC +
Preference number: 4 (lower is better)
Translates to: LQQGARTFPQLRAHLALGCSSGW*GPPVPP
Trigger: GGGAGGCACAGGTGGCCCCCACCACCCGGAGGAGCA...TCCCAAGGCCAGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTGCTGGAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308874.12
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp GCCTTCCGCTCAGTCACCCCGAGGTGGTTTCTGGACCCCCAGCATGTTGGGCAGACGCGTAGCGAGGCCTaGCAGGGGCCAGCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: AFRSVTPRWFLDPQHVGQTRSEA*QGPAQG
Trigger: GCCCTGGGCTGGCCCCTGCCAGGCCTCGCTACGCGT...CTGCCCAACATGCTGGGGGTCCAGAAACCACCTCGGGGTGACTGAGCGGAAGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp TGGCCTGTGCCATGGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCCCCCAGGAAGCCCGCTaGTCCTCTTCCAGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: WPVPWVPGSSRELVPSLSPQEAR*SSSSRG
Trigger: GCCCCGGCTGGAAGAGGACCAGCGGGCTTCCTGGGG...GCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCCATGGCACAGGCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp AAGGCCCTGCCTGGCCTTCCGCTCAGTCACCCCGAGGTGGTTTCTGGACCCCCACCCCAGGAAGCCCGCTaGTCCTCTTCCAGCCGGGGC +
Preference number: 4 (lower is better)
Translates to: KALPGLPLSHPEVVSGPPPQEAR*SSSSRG
Trigger: GCCCCGGCTGGAAGAGGACCAGCGGGCTTCCTGGGG...TGGGGGTCCAGAAACCACCTCGGGGTGACTGAGCGGAAGGCCAGGCAGGGCCTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp CCCGAGGAAGGGGAGGAGGAAGAGGAGGAAGGCCCTGCCTGGCCTTCCGCTCAGCGGCAGCGGCCAGGCTaGACACAGCTCCCTCCGTTC +
Preference number: 4 (lower is better)
Translates to: PEEGEEEEEEGPAWPSAQRQRPG*TQLPPF
Trigger: GAACGGAGGGAGCTGTGTCCAGCCTGGCCGCTGCCG...CTGAGCGGAAGGCCAGGCAGGGCCTTCCTCCTCTTCCTCCTCCCCTTCCTCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp GCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTGGCCTTGGGATGCCGGGGCTCAGTCCAGCCTaGGGCGCTGGGCAGTCACGA +
Preference number: 4 (lower is better)
Translates to: AGSSYLPSAEGPPGLGMPGLSPA*GAGQSR
Trigger: TCGTGACTGCCCAGCGCCCCAGGCTGGACTGAGCCC...CGGCATCCCAAGGCCAGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp CCTCCCGAGGAAGGGGAGGAGGAAGAGGAGGAAGGCCCTGCCTGGCCTTCCGCTGGGCTCAGTCCAGCCTaGGGCGCTGGGCAGTCACGA +
Preference number: 4 (lower is better)
Translates to: PPEEGEEEEEEGPAWPSAGLSPA*GAGQSR
Trigger: TCGTGACTGCCCAGCGCCCCAGGCTGGACTGAGCCC...AGCGGAAGGCCAGGCAGGGCCTTCCTCCTCTTCCTCCTCCCCTTCCTCGGGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp GGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTGGGCCCACCTGGCCTTaGGATGCCGTTGGGGTAGCC +
Preference number: 4 (lower is better)
Translates to: GSQAPAGSSYLPSAEGPPGPTWP*DAVGVA
Trigger: GGCTACCCCAACGGCATCCCAAGGCCAGGTGGGCCC...AGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp GCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTGGCCTTGGGATGCCGGGGCCCACCTGGCCTTaGGATGCCGTTGGGGTAGCC +
Preference number: 4 (lower is better)
Translates to: AGSSYLPSAEGPPGLGMPGPTWP*DAVGVA
Trigger: GGCTACCCCAACGGCATCCCAAGGCCAGGTGGGCCC...CGGCATCCCAAGGCCAGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp GGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTAGCCTCCGGGCTGCCTaGCCTGTGCCATGGGTCCCA +
Preference number: 4 (lower is better)
Translates to: GSQAPAGSSYLPSAEGPPSLRAA*PVPWVP
Trigger: TGGGACCCATGGCACAGGCCAGGCAGCCCGGAGGCT...AGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp TGCCATGGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCGGTGGCCTTCTCCTCTaGGTGGCCGCCGGATCCGGG +
Preference number: 4 (lower is better)
Translates to: CHGSQAPAGSSYLPSAEGGGLLL*VAAGSG
Trigger: CCCGGATCCGGCGGCCACCCAGAGGAGAAGGCCACC...GCCCTCAGCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCCATGGCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371698.3
CDS-3UTR CCA 90 bp AAGGCCCTGCCTGGCCTTCCGCTCAGTCACCCCGAGGTGGTTTCTGGACCCCCACCCTCGCCCTTCCCCTaGCCGCTCCCGTCTCCCTTC +
Preference number: 4 (lower is better)
Translates to: KALPGLPLSHPEVVSGPPPSPFP*PLPSPF
Trigger: GAAGGGAGACGGGAGCGGCCAGGGGAAGGGCGAGGG...TGGGGGTCCAGAAACCACCTCGGGGTGACTGAGCGGAAGGCCAGGCAGGGCCTT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371699.5
CDS-3UTR CCA 90 bp CCCGAGGAAGGGGAGGAGGAAGAGGAGGAAGGCCCTGCCTGGCCTTCCGCTCAGCGGCCTCGGACGGGCTaGCTCTGTCAGCCACGGATG +
Preference number: 4 (lower is better)
Translates to: PEEGEEEEEEGPAWPSAQRPRTG*LCQPRM
Trigger: CATCCGTGGCTGACAGAGCCAGCCCGTCCGAGGCCG...CTGAGCGGAAGGCCAGGCAGGGCCTTCCTCCTCTTCCTCCTCCCCTTCCTCGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371699.5
CDS-3UTR TCA 90 bp CTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTGGCCTTGGGAGAGACAGGGTCCCCGTaGGCCCGGACAGCACACACC +
Preference number: 4 (lower is better)
Translates to: LQQGARTFPQLRAHLALGETGSP*ARTAHT
Trigger: GGTGTGTGCTGTCCGGGCTCACGGGGACCCTGTCTC...TCCCAAGGCCAGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTGCTGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR GCA 90 bp GGAGCCTCCCGAGGAAGGGGAGGAGGAAGAGGAGGAAGGCCCTGCCTGGCCTTCCCTCCCTTGCAGCCGTaGAGGGCCAGCTTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: GASRGRGGGRGGRPCLAFPPLQP*RASLVQ
Trigger: CTGCACCAAGCTGGCCCTGCACGGCTGCAAGGGAGG...GAAGGCCAGGCAGGGCCTTCCTCCTCTTCCTCCTCCCCTTCCTCGGGAGGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308874.12
CDS-3UTR GCA 90 bp GCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTGGCCTTGGGATGCCGCACAGGAGCCTCCCTTaGAGCCGTGCAGGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: AGSSYLPSAEGPPGLGMPHRSLP*SRAGPA
Trigger: AGCTGGCCCTGCACGGCTGCAAGGGAGGCTCCTGTG...CGGCATCCCAAGGCCAGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308874.12
ENST00000406555.7
CDS-3UTR GCA 90 bp TGTGCCATGGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCCTCATGGCCTGTaGCTCCAGGCGGGGTGGCCT +
Preference number: 4 (lower is better)
Translates to: CAMGPRLQQGARTFPQLRAPHGL*LQAGWP
Trigger: AGGCCACCCCGCCTGGAGGCACAGGCCATGAGGGGC...CCTCAGCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCCATGGCACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR GCA 90 bp CAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTGGCCTTGGGATGCCGTTGGTTCGGTAGGTGCTaGAGGCCCGGTGCCCGTCGC +
Preference number: 4 (lower is better)
Translates to: QGARTFPQLRAHLALGCRWFGRC*RPGARR
Trigger: GCGACGGGCACCGGGCCTGCAGCACCTACCGAACCA...ACGGCATCCCAAGGCCAGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR GCA 90 bp TGGCCTGTGCCATGGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGGTTCGGTAGGTGCTaGAGGCCCGGTGCCCGTCGC +
Preference number: 4 (lower is better)
Translates to: WPVPWVPGSSRELVPSLSWFGRC*RPGARR
Trigger: GCGACGGGCACCGGGCCTGCAGCACCTACCGAACCA...GCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCCATGGCACAGGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR GCA 90 bp TGCCATGGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCTGGTTCGGTAGGTGCTaGAGGCCCGGTGCCCGTCGC +
Preference number: 4 (lower is better)
Translates to: CHGSQAPAGSSYLPSAEGWFGRC*RPGARR
Trigger: GCGACGGGCACCGGGCCTGCAGCACCTACCGAACCA...GCCCTCAGCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCCATGGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR GCA 90 bp GCCTTCCGCTCAGTCACCCCGAGGTGGTTTCTGGACCCCCAGCATGTTGGGCAGGGGCCAGCCCAGGGCTaGGGCGGTAGGCGGTCCTAT +
Preference number: 4 (lower is better)
Translates to: AFRSVTPRWFLDPQHVGQGPAQG*GGRRSY
Trigger: ATAGGACCGCCTACCGCCGCAGCCCTGGGCTGGCCC...CTGCCCAACATGCTGGGGGTCCAGAAACCACCTCGGGGTGACTGAGCGGAAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR GCA 90 bp GGAGCCTCCCGAGGAAGGGGAGGAGGAAGAGGAGGAAGGCCCTGCCTGGCCTTCGAGCCCATGCTCCAGTaGCTGCGAGGCCAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: GASRGRGGGRGGRPCLAFEPMLQ*LRGQAV
Trigger: CACAGCCTGGCCTCGCAGGCACTGGAGCATGGGCTC...GAAGGCCAGGCAGGGCCTTCCTCCTCTTCCTCCTCCCCTTCCTCGGGAGGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR GCA 90 bp GGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTGAGCCCATGCTCCAGTaGCTGCGAGGCCAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: GSQAPAGSSYLPSAEGPPEPMLQ*LRGQAV
Trigger: CACAGCCTGGCCTCGCAGGCACTGGAGCATGGGCTC...AGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR GCA 90 bp GAGCCTCCCGAGGAAGGGGAGGAGGAAGAGGAGGAAGGCCCTGCCTGGCCTTCCGAGCCCATGCTCCAGTaGCTGCGAGGCCAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: EPPEEGEEEEEEGPAWPSEPMLQ*LRGQAV
Trigger: CACAGCCTGGCCTCGCAGGCACTGGAGCATGGGCTC...GGAAGGCCAGGCAGGGCCTTCCTCCTCTTCCTCCTCCCCTTCCTCGGGAGGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR GCA 90 bp CCTCCCGAGGAAGGGGAGGAGGAAGAGGAGGAAGGCCCTGCCTGGCCTTCCGCTGAGCCCATGCTCCAGTaGCTGCGAGGCCAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: PPEEGEEEEEEGPAWPSAEPMLQ*LRGQAV
Trigger: CACAGCCTGGCCTCGCAGGCACTGGAGCATGGGCTC...AGCGGAAGGCCAGGCAGGGCCTTCCTCCTCTTCCTCCTCCCCTTCCTCGGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR GCA 90 bp TGTGCCATGGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGGGTCCGGGAGCCCATaGTCCAGTGCCTGCGAGGCC +
Preference number: 4 (lower is better)
Translates to: CAMGPRLQQGARTFPQLRGSGSP*SSACEA
Trigger: GGCCTCGCAGGCACTGGAGCATGGGCTCCCGGACCC...CCTCAGCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCCATGGCACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR GCA 90 bp CCTCCCGAGGAAGGGGAGGAGGAAGAGGAGGAAGGCCCTGCCTGGCCTTCCGCTCGCTCAGGGAGTCGATaGGGCCGAGCTGCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: PPEEGEEEEEEGPAWPSARSGSR*GRAAGR
Trigger: CCTTCCAGCAGCTCGGCCGCATCGACTCCCTGAGCG...AGCGGAAGGCCAGGCAGGGCCTTCCTCCTCTTCCTCCTCCCCTTCCTCGGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR GCA 90 bp GGAGCCTCCCGAGGAAGGGGAGGAGGAAGAGGAGGAAGGCCCTGCCTGGCCTTCTCCCAGCCCATCCCATaGCAGGGTCTGGGGAGCCTC +
Preference number: 4 (lower is better)
Translates to: GASRGRGGGRGGRPCLAFSQPIP*QGLGSL
Trigger: GAGGCTCCCCAGACCCTGGCATGGGATGGGCTGGGA...GAAGGCCAGGCAGGGCCTTCCTCCTCTTCCTCCTCCCCTTCCTCGGGAGGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR GCA 90 bp GAGCCTCCCGAGGAAGGGGAGGAGGAAGAGGAGGAAGGCCCTGCCTGGCCTTCCTCCCAGCCCATCCCATaGCAGGGTCTGGGGAGCCTC +
Preference number: 4 (lower is better)
Translates to: EPPEEGEEEEEEGPAWPSSQPIP*QGLGSL
Trigger: GAGGCTCCCCAGACCCTGGCATGGGATGGGCTGGGA...GGAAGGCCAGGCAGGGCCTTCCTCCTCTTCCTCCTCCCCTTCCTCGGGAGGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR GCA 90 bp CTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTGGCCTTGGGAGGGCTGCCTGGCCTGTaGCATGGGTCCCAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: LQQGARTFPQLRAHLALGGLPGL*HGSQAP
Trigger: TGGAGCCTGGGACCCATGGCACAGGCCAGGCAGCCC...TCCCAAGGCCAGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTGCTGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR GCA 90 bp CAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTGGCCTTGGGATGCCGTGGGCTGCCTGGCCTGTaGCATGGGTCCCAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: QGARTFPQLRAHLALGCRGLPGL*HGSQAP
Trigger: TGGAGCCTGGGACCCATGGCACAGGCCAGGCAGCCC...ACGGCATCCCAAGGCCAGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR GCA 90 bp TGCCATGGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCGGGCTGCCTGGCCTGTaGCATGGGTCCCAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: CHGSQAPAGSSYLPSAEGGLPGL*HGSQAP
Trigger: TGGAGCCTGGGACCCATGGCACAGGCCAGGCAGCCC...GCCCTCAGCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCCATGGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR GCA 90 bp TGCCATGGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCTCTCACCTCTCCCTaGCTGCTCCGGCCCCTGACC +
Preference number: 4 (lower is better)
Translates to: CHGSQAPAGSSYLPSAEGPLTSP*LLRPLT
Trigger: GGTCAGGGGCCGGAGCAGGCAGGGAGAGGTGAGAGG...GCCCTCAGCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCCATGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371699.5
CDS-3UTR CCA 90 bp CAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTGGCCTTGGGATGCCGTGACCCTAGCCCTTGCTaGGGCCTCAGGCCCACTGGC +
Preference number: 4 (lower is better)
Translates to: QGARTFPQLRAHLALGCRDPSPC*GLRPTG
Trigger: GCCAGTGGGCCTGAGGCCCCAGCAAGGGCTAGGGTC...ACGGCATCCCAAGGCCAGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308874.12
ENST00000406555.7
CDS-3UTR CCA 90 bp GGCCTGTGCCATGGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGCCCAGGCGTGGCCATaGTGGCCGCTGCTGTGTCCT +
Preference number: 4 (lower is better)
Translates to: GLCHGSQAPAGSSYLPSAAQAWP*WPLLCP
Trigger: AGGACACAGCAGCGGCCACCATGGCCACGCCTGGGC...AGCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCCATGGCACAGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308874.12
ENST00000406555.7
CDS-3UTR CCA 90 bp CCCGAGGAAGGGGAGGAGGAAGAGGAGGAAGGCCCTGCCTGGCCTTCCGCTCAGGTGCCTCCCCGGTCCTaGGGGCTGCCTGGATTCACA +
Preference number: 4 (lower is better)
Translates to: PEEGEEEEEEGPAWPSAQVPPRS*GLPGFT
Trigger: TGTGAATCCAGGCAGCCCCCAGGACCGGGGAGGCAC...CTGAGCGGAAGGCCAGGCAGGGCCTTCCTCCTCTTCCTCCTCCCCTTCCTCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000308874.12
CDS-3UTR CCA 90 bp TGCCATGGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCAGCTGCTCCTCCGGGTaGTGGGGGCCACCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: CHGSQAPAGSSYLPSAEGSCSSG*WGPPVP
Trigger: AGGCACAGGTGGCCCCCACCACCCGGAGGAGCAGCT...GCCCTCAGCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCCATGGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308874.12
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp CTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTGGCCTTGGGAAGCTGCTCCTCCGGGTaGTGGGGGCCACCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: LQQGARTFPQLRAHLALGSCSSG*WGPPVP
Trigger: AGGCACAGGTGGCCCCCACCACCCGGAGGAGCAGCT...TCCCAAGGCCAGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTGCTGGAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308874.12
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp TGGCCTGTGCCATGGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCAGCTGCTCCTCCGGGTaGTGGGGGCCACCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: WPVPWVPGSSRELVPSLSSCSSG*WGPPVP
Trigger: AGGCACAGGTGGCCCCCACCACCCGGAGGAGCAGCT...GCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCCATGGCACAGGCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000308874.12
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp CCTCCCGAGGAAGGGGAGGAGGAAGAGGAGGAAGGCCCTGCCTGGCCTTCCGCTGGTGGCCTTCTCCTCTaGGTGGCCTGGCGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: PPEEGEEEEEEGPAWPSAGGLLL*VAWRRR
Trigger: TCTCCTCCGCCAGGCCACCCAGAGGAGAAGGCCACC...AGCGGAAGGCCAGGCAGGGCCTTCCTCCTCTTCCTCCTCCCCTTCCTCGGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000308874.12
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp AAGGCCCTGCCTGGCCTTCCGCTCAGTCACCCCGAGGTGGTTTCTGGACCCCCACCTGAGAGCCCCTCATaGCCTGTGCCTCCAGGCGGG +
Preference number: 4 (lower is better)
Translates to: KALPGLPLSHPEVVSGPPPESPS*PVPPGG
Trigger: CCCGCCTGGAGGCACAGGCCATGAGGGGCTCTCAGG...TGGGGGTCCAGAAACCACCTCGGGGTGACTGAGCGGAAGGCCAGGCAGGGCCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp TGCCATGGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCTGAGAGCCCCTCATaGCCTGTGCCTCCAGGCGGG +
Preference number: 4 (lower is better)
Translates to: CHGSQAPAGSSYLPSAEGPESPS*PVPPGG
Trigger: CCCGCCTGGAGGCACAGGCCATGAGGGGCTCTCAGG...GCCCTCAGCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCCATGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp CAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTGGCCTTGGGATGCCGTCCTGAGAGCCCCTCATaGCCTGTGCCTCCAGGCGGG +
Preference number: 4 (lower is better)
Translates to: QGARTFPQLRAHLALGCRPESPS*PVPPGG
Trigger: CCCGCCTGGAGGCACAGGCCATGAGGGGCTCTCAGG...ACGGCATCCCAAGGCCAGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp CAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTGGCCTTGGGATGCCGTCGGCAGCGGCCAGGCTaGACACAGCTCCCTCCGTTC +
Preference number: 4 (lower is better)
Translates to: QGARTFPQLRAHLALGCRRQRPG*TQLPPF
Trigger: GAACGGAGGGAGCTGTGTCCAGCCTGGCCGCTGCCG...ACGGCATCCCAAGGCCAGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp GGAGCCTCCCGAGGAAGGGGAGGAGGAAGAGGAGGAAGGCCCTGCCTGGCCTTCGAGGAAGGCCCTGCCTaGCCTTCCGCTCAGTCACCC +
Preference number: 4 (lower is better)
Translates to: GASRGRGGGRGGRPCLAFEEGPA*PSAQSP
Trigger: GGGTGACTGAGCGGAAGGCCAGGCAGGGCCTTCCTC...GAAGGCCAGGCAGGGCCTTCCTCCTCTTCCTCCTCCCCTTCCTCGGGAGGCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp CCTCCCGAGGAAGGGGAGGAGGAAGAGGAGGAAGGCCCTGCCTGGCCTTCCGCTTCCCATGCCAGGGTCTaGGGAGCCTCCCGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: PPEEGEEEEEEGPAWPSASHARV*GASRGR
Trigger: CCTTCCTCGGGAGGCTCCCCAGACCCTGGCATGGGA...AGCGGAAGGCCAGGCAGGGCCTTCCTCCTCTTCCTCCTCCCCTTCCTCGGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp GGCCTGTGCCATGGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGGGCCCACCTGGCCTTaGGATGCCGTTGGGGTAGCC +
Preference number: 4 (lower is better)
Translates to: GLCHGSQAPAGSSYLPSAGPTWP*DAVGVA
Trigger: GGCTACCCCAACGGCATCCCAAGGCCAGGTGGGCCC...AGCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCCATGGCACAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp CAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTGGCCTTGGGATGCCGTGCCTGGCCTGTGCCATaGGTCCCAGGCTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: QGARTFPQLRAHLALGCRAWPVP*VPGSSR
Trigger: CCTGCTGGAGCCTGGGACCCATGGCACAGGCCAGGC...ACGGCATCCCAAGGCCAGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp TGGCCTGTGCCATGGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCGCCTGGCCTGTGCCATaGGTCCCAGGCTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: WPVPWVPGSSRELVPSLSAWPVP*VPGSSR
Trigger: CCTGCTGGAGCCTGGGACCCATGGCACAGGCCAGGC...GCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCCATGGCACAGGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp AAGGCCCTGCCTGGCCTTCCGCTCAGTCACCCCGAGGTGGTTTCTGGACCCCCAAGCCTCCGGGCTGCCTaGCCTGTGCCATGGGTCCCA +
Preference number: 4 (lower is better)
Translates to: KALPGLPLSHPEVVSGPPSLRAA*PVPWVP
Trigger: TGGGACCCATGGCACAGGCCAGGCAGCCCGGAGGCT...TGGGGGTCCAGAAACCACCTCGGGGTGACTGAGCGGAAGGCCAGGCAGGGCCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp CTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTGGCCTTGGGAAGCCTCCGGGCTGCCTaGCCTGTGCCATGGGTCCCA +
Preference number: 4 (lower is better)
Translates to: LQQGARTFPQLRAHLALGSLRAA*PVPWVP
Trigger: TGGGACCCATGGCACAGGCCAGGCAGCCCGGAGGCT...TCCCAAGGCCAGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTGCTGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp TGGCCTGTGCCATGGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCAGCCTCCGGGCTGCCTaGCCTGTGCCATGGGTCCCA +
Preference number: 4 (lower is better)
Translates to: WPVPWVPGSSRELVPSLSSLRAA*PVPWVP
Trigger: TGGGACCCATGGCACAGGCCAGGCAGCCCGGAGGCT...GCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCCATGGCACAGGCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp AAGGCCCTGCCTGGCCTTCCGCTCAGTCACCCCGAGGTGGTTTCTGGACCCCCACCAGAGCGTGCTGGCTaGGCAGAGAGGCGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: KALPGLPLSHPEVVSGPPPERAG*AERRGG
Trigger: CCCTCCACGCCTCTCTGCCCAGCCAGCACGCTCTGG...TGGGGGTCCAGAAACCACCTCGGGGTGACTGAGCGGAAGGCCAGGCAGGGCCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371699.5
3UTR CAA 72 bp GCTCGTACCTTCCCTCAGCTGAGGGCCCACCTGGCCTaGGGATGCCGTTGGGGTAGCCAGGGTGGGGGTAGC +
Preference number: 4 (lower is better)
Translates to: ARTFPQLRAHLA*GCRWGSQGGGS
Trigger: GCTACCCCCACCCTGGCTACCCCAACGGCATCCCAAGGCCAGGTGGGCCCTCAGCTGAGGGAAGGTACGAGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR GCA 90 bp GGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTATGGACCCTAGCCCTTaGTGGGGCCTCAGGCCCACT +
Preference number: 4 (lower is better)
Translates to: GSQAPAGSSYLPSAEGPPMDPSP*WGLRPT
Trigger: AGTGGGCCTGAGGCCCCAGCAAGGGCTAGGGTCCAT...AGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308874.12
ENST00000406555.7
CDS-3UTR GCA 90 bp GAGCCTCCCGAGGAAGGGGAGGAGGAAGAGGAGGAAGGCCCTGCCTGGCCTTCCATGGACCCTAGCCCTTaGTGGGGCCTCAGGCCCACT +
Preference number: 4 (lower is better)
Translates to: EPPEEGEEEEEEGPAWPSMDPSP*WGLRPT
Trigger: AGTGGGCCTGAGGCCCCAGCAAGGGCTAGGGTCCAT...GGAAGGCCAGGCAGGGCCTTCCTCCTCTTCCTCCTCCCCTTCCTCGGGAGGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308874.12
ENST00000406555.7
CDS-3UTR GCA 90 bp AAGGCCCTGCCTGGCCTTCCGCTCAGTCACCCCGAGGTGGTTTCTGGACCCCCAGGCCATGGTGGCCGCTaGTGTGTCCTGGGACTGGAG +
Preference number: 4 (lower is better)
Translates to: KALPGLPLSHPEVVSGPPGHGGR*CVLGLE
Trigger: CTCCAGTCCCAGGACACAGCAGCGGCCACCATGGCC...TGGGGGTCCAGAAACCACCTCGGGGTGACTGAGCGGAAGGCCAGGCAGGGCCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308874.12
ENST00000406555.7
CDS-3UTR GCA 90 bp GGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTGGGCCCCCGTTGGGTTaGTCATCCACTGCTAGGGAG +
Preference number: 4 (lower is better)
Translates to: GSQAPAGSSYLPSAEGPPGPPLG*SSTARE
Trigger: CTCCCTAGCAGTGGATGAGCAACCCAACGGGGGCCC...AGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308874.12
CDS-3UTR GCA 90 bp CCCGAGGAAGGGGAGGAGGAAGAGGAGGAAGGCCCTGCCTGGCCTTCCGCTCAGGGTAGGCGTGCTCTGTaGCGCCCACTGCCAACACCA +
Preference number: 4 (lower is better)
Translates to: PEEGEEEEEEGPAWPSAQGRRAL*RPLPTP
Trigger: TGGTGTTGGCAGTGGGCGGCACAGAGCACGCCTACC...CTGAGCGGAAGGCCAGGCAGGGCCTTCCTCCTCTTCCTCCTCCCCTTCCTCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR GCA 90 bp GGAGCCTCCCGAGGAAGGGGAGGAGGAAGAGGAGGAAGGCCCTGCCTGGCCTTCGGTAGGCGTGCTCTGTaGCGCCCACTGCCAACACCA +
Preference number: 4 (lower is better)
Translates to: GASRGRGGGRGGRPCLAFGRRAL*RPLPTP
Trigger: TGGTGTTGGCAGTGGGCGGCACAGAGCACGCCTACC...GAAGGCCAGGCAGGGCCTTCCTCCTCTTCCTCCTCCCCTTCCTCGGGAGGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR GCA 90 bp CCCGAGGAAGGGGAGGAGGAAGAGGAGGAAGGCCCTGCCTGGCCTTCCGCTCAGCCATGCTCCAGTGCCTaGGAGGCCAGGCTGTGCAGT +
Preference number: 4 (lower is better)
Translates to: PEEGEEEEEEGPAWPSAQPCSSA*EARLCS
Trigger: ACTGCACAGCCTGGCCTCGCAGGCACTGGAGCATGG...CTGAGCGGAAGGCCAGGCAGGGCCTTCCTCCTCTTCCTCCTCCCCTTCCTCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR GCA 90 bp GCCTTCCGCTCAGTCACCCCGAGGTGGTTTCTGGACCCCCAGCATGTTGGGCAGAGTGCACCAGGAGGCTaGCGGGGTCCGGGAGCCCAT +
Preference number: 4 (lower is better)
Translates to: AFRSVTPRWFLDPQHVGQSAPGG*RGPGAH
Trigger: ATGGGCTCCCGGACCCCGGCAGCCTCCTGGTGCACT...CTGCCCAACATGCTGGGGGTCCAGAAACCACCTCGGGGTGACTGAGCGGAAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR GCA 90 bp GGAGCCTCCCGAGGAAGGGGAGGAGGAAGAGGAGGAAGGCCCTGCCTGGCCTTCTCGATGCGGCCGAGCTaGTGGAAGGAGTGCACCAGG +
Preference number: 4 (lower is better)
Translates to: GASRGRGGGRGGRPCLAFSMRPS*WKECTR
Trigger: CCTGGTGCACTCCTTCCAGCAGCTCGGCCGCATCGA...GAAGGCCAGGCAGGGCCTTCCTCCTCTTCCTCCTCCCCTTCCTCGGGAGGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR GCA 90 bp GCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTGGCCTTGGGATGCCGTCGATGCGGCCGAGCTaGTGGAAGGAGTGCACCAGG +
Preference number: 4 (lower is better)
Translates to: AGSSYLPSAEGPPGLGMPSMRPS*WKECTR
Trigger: CCTGGTGCACTCCTTCCAGCAGCTCGGCCGCATCGA...CGGCATCCCAAGGCCAGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR GCA 90 bp GGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTTCGATGCGGCCGAGCTaGTGGAAGGAGTGCACCAGG +
Preference number: 4 (lower is better)
Translates to: GSQAPAGSSYLPSAEGPPSMRPS*WKECTR
Trigger: CCTGGTGCACTCCTTCCAGCAGCTCGGCCGCATCGA...AGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR GCA 90 bp AAGGCCCTGCCTGGCCTTCCGCTCAGTCACCCCGAGGTGGTTTCTGGACCCCCACGCTCAGGGAGTCGATaGGGCCGAGCTGCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: KALPGLPLSHPEVVSGPPRSGSR*GRAAGR
Trigger: CCTTCCAGCAGCTCGGCCGCATCGACTCCCTGAGCG...TGGGGGTCCAGAAACCACCTCGGGGTGACTGAGCGGAAGGCCAGGCAGGGCCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR GCA 90 bp CAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTGGCCTTGGGATGCCGTCGCTCAGGGAGTCGATaGGGCCGAGCTGCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: QGARTFPQLRAHLALGCRRSGSR*GRAAGR
Trigger: CCTTCCAGCAGCTCGGCCGCATCGACTCCCTGAGCG...ACGGCATCCCAAGGCCAGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR GCA 90 bp CCTCCCGAGGAAGGGGAGGAGGAAGAGGAGGAAGGCCCTGCCTGGCCTTCCGCTAGAGGAGGAAGGCCCTaGCTGGCCTTCCGCTCAGTC +
Preference number: 4 (lower is better)
Translates to: PPEEGEEEEEEGPAWPSARGGRP*LAFRSV
Trigger: GACTGAGCGGAAGGCCAGGCAGGGCCTTCCTCCTCT...AGCGGAAGGCCAGGCAGGGCCTTCCTCCTCTTCCTCCTCCCCTTCCTCGGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR GCA 90 bp CTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTGGCCTTGGGAGGCAGAGGAGCCGTCTaGTCCCGAGCGAGGGTTTGG +
Preference number: 4 (lower is better)
Translates to: LQQGARTFPQLRAHLALGGRGAV*SRARVW
Trigger: CCAAACCCTCGCTCGGGAGCAGACGGCTCCTCTGCC...TCCCAAGGCCAGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTGCTGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371699.5
CDS-3UTR GCA 90 bp GGAGCCTCCCGAGGAAGGGGAGGAGGAAGAGGAGGAAGGCCCTGCCTGGCCTTCGGGAGTGAAGCAGAGTaGGGGAGGGATGGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: GASRGRGGGRGGRPCLAFGSEAE*GRDGAS
Trigger: GGAAGCCCCATCCCTCCCGCACTCTGCTTCACTCCC...GAAGGCCAGGCAGGGCCTTCCTCCTCTTCCTCCTCCCCTTCCTCGGGAGGCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371699.5
CDS-3UTR CCA 90 bp TGTGCCATGGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGAGGCAGGCGTGGCCATGGTaGCCGCTGCTGTGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: CAMGPRLQQGARTFPQLRQAWPW*PLLCPG
Trigger: CCCAGGACACAGCAGCGGCCACCATGGCCACGCCTG...CCTCAGCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCCATGGCACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308874.12
ENST00000406555.7
CDS-3UTR CCA 90 bp GCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTGGCCTTGGGATGCCGTCCCCGGGCCCCCGTTaGGTTGCTCATCCACTGCTA +
Preference number: 4 (lower is better)
Translates to: AGSSYLPSAEGPPGLGMPSPGPR*VAHPLL
Trigger: TAGCAGTGGATGAGCAACCCAACGGGGGCCCGGGGA...CGGCATCCCAAGGCCAGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308874.12
CDS-3UTR CCA 90 bp GGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTCCCTCCGTTCCGGCATaGCGGCTGGCATATTGCTGC +
Preference number: 4 (lower is better)
Translates to: GSQAPAGSSYLPSAEGPPPSVPA*RLAYCC
Trigger: GCAGCAATATGCCAGCCGCCATGCCGGAACGGAGGG...AGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp TGTGCCATGGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGAGGCGGCAGCGGCCAGGCTaGACACAGCTCCCTCCGTTC +
Preference number: 4 (lower is better)
Translates to: CAMGPRLQQGARTFPQLRRQRPG*TQLPPF
Trigger: GAACGGAGGGAGCTGTGTCCAGCCTGGCCGCTGCCG...CCTCAGCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCCATGGCACA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp AAGGCCCTGCCTGGCCTTCCGCTCAGTCACCCCGAGGTGGTTTCTGGACCCCCAGTGTTGACGCAGCGCTaGGGACAGCCGCCCCTCCTA +
Preference number: 4 (lower is better)
Translates to: KALPGLPLSHPEVVSGPPVLTQR*GQPPLL
Trigger: TAGGAGGGGCGGCTGTCCCCAGCGCTGCGTCAACAC...TGGGGGTCCAGAAACCACCTCGGGGTGACTGAGCGGAAGGCCAGGCAGGGCCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp GGCCTGTGCCATGGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGTGTTGACGCAGCGCTaGGGACAGCCGCCCCTCCTA +
Preference number: 4 (lower is better)
Translates to: GLCHGSQAPAGSSYLPSAVLTQR*GQPPLL
Trigger: TAGGAGGGGCGGCTGTCCCCAGCGCTGCGTCAACAC...AGCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCCATGGCACAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp TGCCATGGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCGTGTTGACGCAGCGCTaGGGACAGCCGCCCCTCCTA +
Preference number: 4 (lower is better)
Translates to: CHGSQAPAGSSYLPSAEGVLTQR*GQPPLL
Trigger: TAGGAGGGGCGGCTGTCCCCAGCGCTGCGTCAACAC...GCCCTCAGCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCCATGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp CCTCCCGAGGAAGGGGAGGAGGAAGAGGAGGAAGGCCCTGCCTGGCCTTCCGCTATGCGGCCGAGCTGCTaGAAGGAGTGCACCAGGAGG +
Preference number: 4 (lower is better)
Translates to: PPEEGEEEEEEGPAWPSAMRPSC*KECTRR
Trigger: CCTCCTGGTGCACTCCTTCCAGCAGCTCGGCCGCAT...AGCGGAAGGCCAGGCAGGGCCTTCCTCCTCTTCCTCCTCCCCTTCCTCGGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp CCCGAGGAAGGGGAGGAGGAAGAGGAGGAAGGCCCTGCCTGGCCTTCCGCTCAGCCCCGAGGTGGTTTCTaGACCCCCAGCATGTTGGGC +
Preference number: 4 (lower is better)
Translates to: PEEGEEEEEEGPAWPSAQPRGGF*TPSMLG
Trigger: GCCCAACATGCTGGGGGTCCAGAAACCACCTCGGGG...CTGAGCGGAAGGCCAGGCAGGGCCTTCCTCCTCTTCCTCCTCCCCTTCCTCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp TGCCATGGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCGAGGAAGGCCCTGCCTaGCCTTCCGCTCAGTCACCC +
Preference number: 4 (lower is better)
Translates to: CHGSQAPAGSSYLPSAEGEEGPA*PSAQSP
Trigger: GGGTGACTGAGCGGAAGGCCAGGCAGGGCCTTCCTC...GCCCTCAGCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCCATGGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp CTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTGGCCTTGGGAGAGGAAGGCCCTGCCTaGCCTTCCGCTCAGTCACCC +
Preference number: 4 (lower is better)
Translates to: LQQGARTFPQLRAHLALGEEGPA*PSAQSP
Trigger: GGGTGACTGAGCGGAAGGCCAGGCAGGGCCTTCCTC...TCCCAAGGCCAGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTGCTGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp GGCCTGTGCCATGGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGAGGAAGGCCCTGCCTaGCCTTCCGCTCAGTCACCC +
Preference number: 4 (lower is better)
Translates to: GLCHGSQAPAGSSYLPSAEEGPA*PSAQSP
Trigger: GGGTGACTGAGCGGAAGGCCAGGCAGGGCCTTCCTC...AGCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCCATGGCACAGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp CTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTGGCCTTGGGATCCCATGCCAGGGTCTaGGGAGCCTCCCGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: LQQGARTFPQLRAHLALGSHARV*GASRGR
Trigger: CCTTCCTCGGGAGGCTCCCCAGACCCTGGCATGGGA...TCCCAAGGCCAGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTGCTGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp CAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTGGCCTTGGGATGCCGTTCCCATGCCAGGGTCTaGGGAGCCTCCCGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: QGARTFPQLRAHLALGCRSHARV*GASRGR
Trigger: CCTTCCTCGGGAGGCTCCCCAGACCCTGGCATGGGA...ACGGCATCCCAAGGCCAGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp GCCTTCCGCTCAGTCACCCCGAGGTGGTTTCTGGACCCCCAGCATGTTGGGCAGGCCTGGCCTGTGCCATaGGTCCCAGGCTCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: AFRSVTPRWFLDPQHVGQAWPVP*VPGSSR
Trigger: CCTGCTGGAGCCTGGGACCCATGGCACAGGCCAGGC...CTGCCCAACATGCTGGGGGTCCAGAAACCACCTCGGGGTGACTGAGCGGAAGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp TGGCCTGTGCCATGGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCCCTGGGCATCTCAGGTaGCGCGAGACAGAGGGGCAC +
Preference number: 4 (lower is better)
Translates to: WPVPWVPGSSRELVPSLSPGHLR*RETEGH
Trigger: GTGCCCCTCTGTCTCGCGCCACCTGAGATGCCCAGG...GCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCCATGGCACAGGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371699.5
CDS-3UTR CCA 90 bp AAGGCCCTGCCTGGCCTTCCGCTCAGTCACCCCGAGGTGGTTTCTGGACCCCCATGGCAGAGGCCAGCCTaGGCATCTCAGGTGGCGCGA +
Preference number: 4 (lower is better)
Translates to: KALPGLPLSHPEVVSGPPWQRPA*ASQVAR
Trigger: TCGCGCCACCTGAGATGCCCAGGCTGGCCTCTGCCA...TGGGGGTCCAGAAACCACCTCGGGGTGACTGAGCGGAAGGCCAGGCAGGGCCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371699.5
CDS-3UTR CCA 90 bp AAGGCCCTGCCTGGCCTTCCGCTCAGTCACCCCGAGGTGGTTTCTGGACCCCCACTTCCCAGAGCGTGCTaGCTGGGCAGAGAGGCGTGG +
Preference number: 4 (lower is better)
Translates to: KALPGLPLSHPEVVSGPPLPRAC*LGREAW
Trigger: CCACGCCTCTCTGCCCAGCCAGCACGCTCTGGGAAG...TGGGGGTCCAGAAACCACCTCGGGGTGACTGAGCGGAAGGCCAGGCAGGGCCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371699.5
CDS-3UTR TCA 90 bp GGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTCTGCTAGGGAGAAGATaGGGAGACCTCAGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: GSQAPAGSSYLPSAEGPPLLGRR*GDLSPR
Trigger: CCGAGGGCTGAGGTCTCCTCATCTTCTCCCTAGCAG...AGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308874.12
CDS-3UTR TCA 90 bp CTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTGGCCTTGGGAGCCCACTGCTCCAGCTaGTGGCGTGGAGGAGTCCAT +
Preference number: 4 (lower is better)
Translates to: LQQGARTFPQLRAHLALGAHCSS*WRGGVH
Trigger: ATGGACTCCTCCACGCCATCAGCTGGAGCAGTGGGC...TCCCAAGGCCAGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTGCTGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371699.5
CDS-3UTR GCA 90 bp TGTGCCATGGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGAGGCACAGGAGCCTCCCTTaGAGCCGTGCAGGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: CAMGPRLQQGARTFPQLRHRSLP*SRAGPA
Trigger: AGCTGGCCCTGCACGGCTGCAAGGGAGGCTCCTGTG...CCTCAGCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCCATGGCACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308874.12
ENST00000406555.7
CDS-3UTR GCA 90 bp AGCCAGGGGTGGATTCACAGAGAAGATCCCAGCCCATCCCATGCCAGGGTCTGGGACAGGGGCAGGAGCTaGTCCTCCGGGTGGTGGGGG +
Preference number: 4 (lower is better)
Translates to: SQGWIHREDPSPSHARVWDRGRS*SSGWWG
Trigger: CCCCCACCACCCGGAGGAGCAGCTCCTGCCCCTGTC...CCAGACCCTGGCATGGGATGGGCTGGGATCTTCTCTGTGAATCCACCCCTGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308874.12
ENST00000371699.5
ENST00000406555.7
CDS-3UTR GCA 90 bp GGGGGTAGCCAGGGGTGGATTCACAGAGAAGATCCCAGCCCATCCCATGCCAGGTGGTTCGGTAGGTGCTaGAGGCCCGGTGCCCGTCGC +
Preference number: 4 (lower is better)
Translates to: GGSQGWIHREDPSPSHARWFGRC*RPGARR
Trigger: GCGACGGGCACCGGGCCTGCAGCACCTACCGAACCA...CCTGGCATGGGATGGGCTGGGATCTTCTCTGTGAATCCACCCCTGGCTACCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR GCA 90 bp TGGCCTGTGCCATGGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCAGATGGTTCGGTAGGTaGTGCAGGCCCGGTGCCCGT +
Preference number: 4 (lower is better)
Translates to: WPVPWVPGSSRELVPSLSRWFGR*CRPGAR
Trigger: ACGGGCACCGGGCCTGCAGCACCTACCGAACCATCT...GCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCCATGGCACAGGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR GCA 90 bp CAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTGGCCTTGGGATGCCGTAGATGGTTCGGTAGGTaGTGCAGGCCCGGTGCCCGT +
Preference number: 4 (lower is better)
Translates to: QGARTFPQLRAHLALGCRRWFGR*CRPGAR
Trigger: ACGGGCACCGGGCCTGCAGCACCTACCGAACCATCT...ACGGCATCCCAAGGCCAGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR GCA 90 bp GGAGCCTCCCGAGGAAGGGGAGGAGGAAGAGGAGGAAGGCCCTGCCTGGCCTTCTCTGCAGACAGGCTGTaGCCCTCCCAACACTGGCAC +
Preference number: 4 (lower is better)
Translates to: GASRGRGGGRGGRPCLAFSADRL*PSQHWH
Trigger: GTGCCAGTGTTGGGAGGGGCACAGCCTGTCTGCAGA...GAAGGCCAGGCAGGGCCTTCCTCCTCTTCCTCCTCCCCTTCCTCGGGAGGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR GCA 90 bp GGCCTGTGCCATGGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTCCATGCTCCAGTGCCTaGGAGGCCAGGCTGTGCAGT +
Preference number: 4 (lower is better)
Translates to: GLCHGSQAPAGSSYLPSAPCSSA*EARLCS
Trigger: ACTGCACAGCCTGGCCTCGCAGGCACTGGAGCATGG...AGCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCCATGGCACAGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR GCA 90 bp AGCCAGGGGTGGATTCACAGAGAAGATCCCAGCCCATCCCATGCCAGGGTCTGGGGGTCCGGGAGCCCATaGTCCAGTGCCTGCGAGGCC +
Preference number: 4 (lower is better)
Translates to: SQGWIHREDPSPSHARVWGSGSP*SSACEA
Trigger: GGCCTCGCAGGCACTGGAGCATGGGCTCCCGGACCC...CCAGACCCTGGCATGGGATGGGCTGGGATCTTCTCTGTGAATCCACCCCTGGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR GCA 90 bp GGGGGTAGCCAGGGGTGGATTCACAGAGAAGATCCCAGCCCATCCCATGCCAGGAGTGCACCAGGAGGCTaGCGGGGTCCGGGAGCCCAT +
Preference number: 4 (lower is better)
Translates to: GGSQGWIHREDPSPSHARSAPGG*RGPGAH
Trigger: ATGGGCTCCCGGACCCCGGCAGCCTCCTGGTGCACT...CCTGGCATGGGATGGGCTGGGATCTTCTCTGTGAATCCACCCCTGGCTACCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR GCA 90 bp TGTGCCATGGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGAGGCGCTCAGGGAGTCGATaGGGCCGAGCTGCTGGAAGG +
Preference number: 4 (lower is better)
Translates to: CAMGPRLQQGARTFPQLRRSGSR*GRAAGR
Trigger: CCTTCCAGCAGCTCGGCCGCATCGACTCCCTGAGCG...CCTCAGCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCCATGGCACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR GCA 90 bp CAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTGGCCTTGGGATGCCGTAGAGGAGGAAGGCCCTaGCTGGCCTTCCGCTCAGTC +
Preference number: 4 (lower is better)
Translates to: QGARTFPQLRAHLALGCRRGGRP*LAFRSV
Trigger: GACTGAGCGGAAGGCCAGGCAGGGCCTTCCTCCTCT...ACGGCATCCCAAGGCCAGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR GCA 90 bp TGGCCTGTGCCATGGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCAGAGGAGGAAGGCCCTaGCTGGCCTTCCGCTCAGTC +
Preference number: 4 (lower is better)
Translates to: WPVPWVPGSSRELVPSLSRGGRP*LAFRSV
Trigger: GACTGAGCGGAAGGCCAGGCAGGGCCTTCCTCCTCT...GCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCCATGGCACAGGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR GCA 90 bp GCCTTCCGCTCAGTCACCCCGAGGTGGTTTCTGGACCCCCAGCATGTTGGGCAGTCCCAGCCCATCCCATaGCAGGGTCTGGGGAGCCTC +
Preference number: 4 (lower is better)
Translates to: AFRSVTPRWFLDPQHVGQSQPIP*QGLGSL
Trigger: GAGGCTCCCCAGACCCTGGCATGGGATGGGCTGGGA...CTGCCCAACATGCTGGGGGTCCAGAAACCACCTCGGGGTGACTGAGCGGAAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR GCA 90 bp GGGGGTAGCCAGGGGTGGATTCACAGAGAAGATCCCAGCCCATCCCATGCCAGGGGGCTGCCTGGCCTGTaGCATGGGTCCCAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: GGSQGWIHREDPSPSHARGLPGL*HGSQAP
Trigger: TGGAGCCTGGGACCCATGGCACAGGCCAGGCAGCCC...CCTGGCATGGGATGGGCTGGGATCTTCTCTGTGAATCCACCCCTGGCTACCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp AGCCAGGGGTGGATTCACAGAGAAGATCCCAGCCCATCCCATGCCAGGGTCTGGTGCTCCTCCGGGTGGTaGGGGCCACCTGTGCCTCCC +
Preference number: 4 (lower is better)
Translates to: SQGWIHREDPSPSHARVWCSSGW*GPPVPP
Trigger: GGGAGGCACAGGTGGCCCCCACCACCCGGAGGAGCA...CCAGACCCTGGCATGGGATGGGCTGGGATCTTCTCTGTGAATCCACCCCTGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308874.12
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp TGGCCTGTGCCATGGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCCCCTCCGTTCCGGCATaGCGGCTGGCATATTGCTGC +
Preference number: 4 (lower is better)
Translates to: WPVPWVPGSSRELVPSLSPSVPA*RLAYCC
Trigger: GCAGCAATATGCCAGCCGCCATGCCGGAACGGAGGG...GCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCCATGGCACAGGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp TGCCATGGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCCTCCGTTCCGGCATaGCGGCTGGCATATTGCTGC +
Preference number: 4 (lower is better)
Translates to: CHGSQAPAGSSYLPSAEGPSVPA*RLAYCC
Trigger: GCAGCAATATGCCAGCCGCCATGCCGGAACGGAGGG...GCCCTCAGCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCCATGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp GGCCTGTGCCATGGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTCCCTCCGTTCCGGCATaGCGGCTGGCATATTGCTGC +
Preference number: 4 (lower is better)
Translates to: GLCHGSQAPAGSSYLPSAPSVPA*RLAYCC
Trigger: GCAGCAATATGCCAGCCGCCATGCCGGAACGGAGGG...AGCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCCATGGCACAGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp GGGGGTAGCCAGGGGTGGATTCACAGAGAAGATCCCAGCCCATCCCATGCCAGGCGGCAGCGGCCAGGCTaGACACAGCTCCCTCCGTTC +
Preference number: 4 (lower is better)
Translates to: GGSQGWIHREDPSPSHARRQRPG*TQLPPF
Trigger: GAACGGAGGGAGCTGTGTCCAGCCTGGCCGCTGCCG...CCTGGCATGGGATGGGCTGGGATCTTCTCTGTGAATCCACCCCTGGCTACCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp GCCTTCCGCTCAGTCACCCCGAGGTGGTTTCTGGACCCCCAGCATGTTGGGCAGGTGTTGACGCAGCGCTaGGGACAGCCGCCCCTCCTA +
Preference number: 4 (lower is better)
Translates to: AFRSVTPRWFLDPQHVGQVLTQR*GQPPLL
Trigger: TAGGAGGGGCGGCTGTCCCCAGCGCTGCGTCAACAC...CTGCCCAACATGCTGGGGGTCCAGAAACCACCTCGGGGTGACTGAGCGGAAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp CCCGAGGAAGGGGAGGAGGAAGAGGAGGAAGGCCCTGCCTGGCCTTCCGCTCAGCCAGCAGGTCCACCCTaGACTGCAGCCTCTGCACTT +
Preference number: 4 (lower is better)
Translates to: PEEGEEEEEEGPAWPSAQPAGPP*TAASAL
Trigger: AAGTGCAGAGGCTGCAGTCCAGGGTGGACCTGCTGG...CTGAGCGGAAGGCCAGGCAGGGCCTTCCTCCTCTTCCTCCTCCCCTTCCTCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp GAGCCTCCCGAGGAAGGGGAGGAGGAAGAGGAGGAAGGCCCTGCCTGGCCTTCCCCAGCAGGTCCACCCTaGACTGCAGCCTCTGCACTT +
Preference number: 4 (lower is better)
Translates to: EPPEEGEEEEEEGPAWPSPAGPP*TAASAL
Trigger: AAGTGCAGAGGCTGCAGTCCAGGGTGGACCTGCTGG...GGAAGGCCAGGCAGGGCCTTCCTCCTCTTCCTCCTCCCCTTCCTCGGGAGGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp TGGCCTGTGCCATGGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCATGCGGCCGAGCTGCTaGAAGGAGTGCACCAGGAGG +
Preference number: 4 (lower is better)
Translates to: WPVPWVPGSSRELVPSLSMRPSC*KECTRR
Trigger: CCTCCTGGTGCACTCCTTCCAGCAGCTCGGCCGCAT...GCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCCATGGCACAGGCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp GGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTTCCAGCCTGGGGCGCTaGGCAGTCACGAGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: GSQAPAGSSYLPSAEGPPSSLGR*AVTSLS
Trigger: AGAAAGACTCGTGACTGCCCAGCGCCCCAGGCTGGA...AGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp GCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTGGCCTTGGGATGCCGTCCAGCCTGGGGCGCTaGGCAGTCACGAGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: AGSSYLPSAEGPPGLGMPSSLGR*AVTSLS
Trigger: AGAAAGACTCGTGACTGCCCAGCGCCCCAGGCTGGA...CGGCATCCCAAGGCCAGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp GGGGGTAGCCAGGGGTGGATTCACAGAGAAGATCCCAGCCCATCCCATGCCAGGGGGCTCAGTCCAGCCTaGGGCGCTGGGCAGTCACGA +
Preference number: 4 (lower is better)
Translates to: GGSQGWIHREDPSPSHARGLSPA*GAGQSR
Trigger: TCGTGACTGCCCAGCGCCCCAGGCTGGACTGAGCCC...CCTGGCATGGGATGGGCTGGGATCTTCTCTGTGAATCCACCCCTGGCTACCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp TGCCATGGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCCCGAGGTGGTTTCTaGACCCCCAGCATGTTGGGC +
Preference number: 4 (lower is better)
Translates to: CHGSQAPAGSSYLPSAEGPRGGF*TPSMLG
Trigger: GCCCAACATGCTGGGGGTCCAGAAACCACCTCGGGG...GCCCTCAGCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCCATGGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp GCCTTCCGCTCAGTCACCCCGAGGTGGTTTCTGGACCCCCAGCATGTTGGGCAGTCCCATGCCAGGGTCTaGGGAGCCTCCCGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: AFRSVTPRWFLDPQHVGQSHARV*GASRGR
Trigger: CCTTCCTCGGGAGGCTCCCCAGACCCTGGCATGGGA...CTGCCCAACATGCTGGGGGTCCAGAAACCACCTCGGGGTGACTGAGCGGAAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp CCCGAGGAAGGGGAGGAGGAAGAGGAGGAAGGCCCTGCCTGGCCTTCCGCTCAGTTCAGAGGAGGCAGCTaGCTCACAGGTGGAAGCCGC +
Preference number: 4 (lower is better)
Translates to: PEEGEEEEEEGPAWPSAQFRGGS*LTGGSR
Trigger: GCGGCTTCCACCTGTGAGCCAGCTGCCTCCTCTGAA...CTGAGCGGAAGGCCAGGCAGGGCCTTCCTCCTCTTCCTCCTCCCCTTCCTCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371699.5
CDS-3UTR CCA 90 bp GCCTTCCGCTCAGTCACCCCGAGGTGGTTTCTGGACCCCCAGCATGTTGGGCAGGGCAGACTAAGCCCCTaGCAGAGGCCAGCCTGGGCA +
Preference number: 4 (lower is better)
Translates to: AFRSVTPRWFLDPQHVGQGRLSP*QRPAWA
Trigger: TGCCCAGGCTGGCCTCTGCCAGGGGCTTAGTCTGCC...CTGCCCAACATGCTGGGGGTCCAGAAACCACCTCGGGGTGACTGAGCGGAAGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371699.5
CDS-3UTR CCA 90 bp GGGGGTAGCCAGGGGTGGATTCACAGAGAAGATCCCAGCCCATCCCATGCCAGGGTGCCTCCCCGGTCCTaGGGGCTGCTGATGCTGCTG +
Preference number: 4 (lower is better)
Translates to: GGSQGWIHREDPSPSHARVPPRS*GLLMLL
Trigger: CAGCAGCATCAGCAGCCCCCAGGACCGGGGAGGCAC...CCTGGCATGGGATGGGCTGGGATCTTCTCTGTGAATCCACCCCTGGCTACCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000406555.7
CDS-3UTR TCA 90 bp AAGGCCCTGCCTGGCCTTCCGCTCAGTCACCCCGAGGTGGTTTCTGGACCCCCACGGGCCCAGCCAAGCTaGACTTTGCTGCCAACCACA +
Preference number: 4 (lower is better)
Translates to: KALPGLPLSHPEVVSGPPRAQPS*TLLPTT
Trigger: TGTGGTTGGCAGCAAAGTTCAGCTTGGCTGGGCCCG...TGGGGGTCCAGAAACCACCTCGGGGTGACTGAGCGGAAGGCCAGGCAGGGCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308874.12
CDS-3UTR GCA 90 bp GGGGGTAGCCAGGGGTGGATTCACAGAGAAGATCCCAGCCCATCCCATGCCAGGGGCCATGGTGGCCGCTaGTGTGTCCTGGGACTGGAG +
Preference number: 4 (lower is better)
Translates to: GGSQGWIHREDPSPSHARGHGGR*CVLGLE
Trigger: CTCCAGTCCCAGGACACAGCAGCGGCCACCATGGCC...CCTGGCATGGGATGGGCTGGGATCTTCTCTGTGAATCCACCCCTGGCTACCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000308874.12
ENST00000406555.7
CDS-3UTR GCA 90 bp GGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTCTCTGTGCCGCCCACTaGCAACACCAGAAGCCACAT +
Preference number: 4 (lower is better)
Translates to: GSQAPAGSSYLPSAEGPPLCAAH*QHQKPH
Trigger: ATGTGGCTTCTGGTGTTGGCAGTGGGCGGCACAGAG...AGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR GCA 90 bp GCCTTCCGCTCAGTCACCCCGAGGTGGTTTCTGGACCCCCAGCATGTTGGGCAGGGTAGGCGTGCTCTGTaGCGCCCACTGCCAACACCA +
Preference number: 4 (lower is better)
Translates to: AFRSVTPRWFLDPQHVGQGRRAL*RPLPTP
Trigger: TGGTGTTGGCAGTGGGCGGCACAGAGCACGCCTACC...CTGCCCAACATGCTGGGGGTCCAGAAACCACCTCGGGGTGACTGAGCGGAAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR GCA 90 bp CCCGAGGAAGGGGAGGAGGAAGAGGAGGAAGGCCCTGCCTGGCCTTCCGCTCAGGGCTGGTACACACGCTaGACGAACGACTCGGAGACA +
Preference number: 4 (lower is better)
Translates to: PEEGEEEEEEGPAWPSAQGWYTR*TNDSET
Trigger: TGTCTCCGAGTCGTTCGTGCAGCGTGTGTACCAGCC...CTGAGCGGAAGGCCAGGCAGGGCCTTCCTCCTCTTCCTCCTCCCCTTCCTCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR GCA 90 bp TGTGCCATGGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGAGGAGATGGTTCGGTAGGTaGTGCAGGCCCGGTGCCCGT +
Preference number: 4 (lower is better)
Translates to: CAMGPRLQQGARTFPQLRRWFGR*CRPGAR
Trigger: ACGGGCACCGGGCCTGCAGCACCTACCGAACCATCT...CCTCAGCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCCATGGCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR GCA 90 bp CTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTGGCCTTGGGATCTGCAGACAGGCTGTaGCCCTCCCAACACTGGCAC +
Preference number: 4 (lower is better)
Translates to: LQQGARTFPQLRAHLALGSADRL*PSQHWH
Trigger: GTGCCAGTGTTGGGAGGGGCACAGCCTGTCTGCAGA...TCCCAAGGCCAGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTGCTGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR GCA 90 bp GGAGCCTCCCGAGGAAGGGGAGGAGGAAGAGGAGGAAGGCCCTGCCTGGCCTTCAGGTCCACCCTGGACTaGAGCCTCTGCACTTCTTCC +
Preference number: 4 (lower is better)
Translates to: GASRGRGGGRGGRPCLAFRSTLD*SLCTSS
Trigger: GGAAGAAGTGCAGAGGCTGCAGTCCAGGGTGGACCT...GAAGGCCAGGCAGGGCCTTCCTCCTCTTCCTCCTCCCCTTCCTCGGGAGGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR GCA 90 bp TGTGCCATGGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGAGGCCATGCTCCAGTGCCTaGGAGGCCAGGCTGTGCAGT +
Preference number: 4 (lower is better)
Translates to: CAMGPRLQQGARTFPQLRPCSSA*EARLCS
Trigger: ACTGCACAGCCTGGCCTCGCAGGCACTGGAGCATGG...CCTCAGCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCCATGGCACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR GCA 90 bp AGCCAGGGGTGGATTCACAGAGAAGATCCCAGCCCATCCCATGCCAGGGTCTGGAGTGCACCAGGAGGCTaGCGGGGTCCGGGAGCCCAT +
Preference number: 4 (lower is better)
Translates to: SQGWIHREDPSPSHARVWSAPGG*RGPGAH
Trigger: ATGGGCTCCCGGACCCCGGCAGCCTCCTGGTGCACT...CCAGACCCTGGCATGGGATGGGCTGGGATCTTCTCTGTGAATCCACCCCTGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR GCA 90 bp AAGGCCCTGCCTGGCCTTCCGCTCAGTCACCCCGAGGTGGTTTCTGGACCCCCAGACCCCTCACCAGGGTaGTTTTGGCCTCTGAAGCCC +
Preference number: 4 (lower is better)
Translates to: KALPGLPLSHPEVVSGPPDPSPG*FWPLKP
Trigger: GGGCTTCAGAGGCCAAAAGCACCCTGGTGAGGGGTC...TGGGGGTCCAGAAACCACCTCGGGGTGACTGAGCGGAAGGCCAGGCAGGGCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000371699.5
CDS-3UTR CCA 90 bp GGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTGCTGTGTCCTGGGACTaGAGATGGACCCTAGCCCTT +
Preference number: 4 (lower is better)
Translates to: GSQAPAGSSYLPSAEGPPAVSWD*RWTLAL
Trigger: AAGGGCTAGGGTCCATCTCCAGTCCCAGGACACAGC...AGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308874.12
ENST00000406555.7
CDS-3UTR CCA 90 bp CTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTGGCCTTGGGAGCCGCTGCTGTGTCCTaGGACTGGAGATGGACCCTA +
Preference number: 4 (lower is better)
Translates to: LQQGARTFPQLRAHLALGAAAVS*DWRWTL
Trigger: TAGGGTCCATCTCCAGTCCCAGGACACAGCAGCGGC...TCCCAAGGCCAGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTGCTGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308874.12
ENST00000406555.7
CDS-3UTR CCA 90 bp GGCCTGTGCCATGGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGCCGCTGCTGTGTCCTaGGACTGGAGATGGACCCTA +
Preference number: 4 (lower is better)
Translates to: GLCHGSQAPAGSSYLPSAAAAVS*DWRWTL
Trigger: TAGGGTCCATCTCCAGTCCCAGGACACAGCAGCGGC...AGCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCCATGGCACAGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308874.12
ENST00000406555.7
CDS-3UTR CCA 90 bp GCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTGGCCTTGGGATGCCGCTCCTCTGGGTGGCCTaGCGGAGGAGAATCAGTCAT +
Preference number: 4 (lower is better)
Translates to: AGSSYLPSAEGPPGLGMPLLWVA*RRRISH
Trigger: ATGACTGATTCTCCTCCGCCAGGCCACCCAGAGGAG...CGGCATCCCAAGGCCAGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308874.12
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp AAGGCCCTGCCTGGCCTTCCGCTCAGTCACCCCGAGGTGGTTTCTGGACCCCCAGCCTTCTCCTCTGGGTaGCCTGGCGGAGGAGAATCA +
Preference number: 4 (lower is better)
Translates to: KALPGLPLSHPEVVSGPPAFSSG*PGGGES
Trigger: TGATTCTCCTCCGCCAGGCCACCCAGAGGAGAAGGC...TGGGGGTCCAGAAACCACCTCGGGGTGACTGAGCGGAAGGCCAGGCAGGGCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308874.12
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp GGGGGTAGCCAGGGGTGGATTCACAGAGAAGATCCCAGCCCATCCCATGCCAGGGGTGGCCTTCTCCTCTaGGTGGCCTGGCGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: GGSQGWIHREDPSPSHARGGLLL*VAWRRR
Trigger: TCTCCTCCGCCAGGCCACCCAGAGGAGAAGGCCACC...CCTGGCATGGGATGGGCTGGGATCTTCTCTGTGAATCCACCCCTGGCTACCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000308874.12
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp CCTCCCGAGGAAGGGGAGGAGGAAGAGGAGGAAGGCCCTGCCTGGCCTTCCGCTTTCCGGCATGGCGGCTaGCATATTGCTGCTCCACAG +
Preference number: 4 (lower is better)
Translates to: PPEEGEEEEEEGPAWPSAFRHGG*HIAAPQ
Trigger: CTGTGGAGCAGCAATATGCCAGCCGCCATGCCGGAA...AGCGGAAGGCCAGGCAGGGCCTTCCTCCTCTTCCTCCTCCCCTTCCTCGGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp GGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTTTCCGGCATGGCGGCTaGCATATTGCTGCTCCACAG +
Preference number: 4 (lower is better)
Translates to: GSQAPAGSSYLPSAEGPPFRHGG*HIAAPQ
Trigger: CTGTGGAGCAGCAATATGCCAGCCGCCATGCCGGAA...AGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp GCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTGGCCTTGGGATGCCGTTCCGGCATGGCGGCTaGCATATTGCTGCTCCACAG +
Preference number: 4 (lower is better)
Translates to: AGSSYLPSAEGPPGLGMPFRHGG*HIAAPQ
Trigger: CTGTGGAGCAGCAATATGCCAGCCGCCATGCCGGAA...CGGCATCCCAAGGCCAGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp CAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTGGCCTTGGGATGCCGTCCAGCAGGTCCACCCTaGACTGCAGCCTCTGCACTT +
Preference number: 4 (lower is better)
Translates to: QGARTFPQLRAHLALGCRPAGPP*TAASAL
Trigger: AAGTGCAGAGGCTGCAGTCCAGGGTGGACCTGCTGG...ACGGCATCCCAAGGCCAGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp AGCCAGGGGTGGATTCACAGAGAAGATCCCAGCCCATCCCATGCCAGGGTCTGGGGGCTCAGTCCAGCCTaGGGCGCTGGGCAGTCACGA +
Preference number: 4 (lower is better)
Translates to: SQGWIHREDPSPSHARVWGLSPA*GAGQSR
Trigger: TCGTGACTGCCCAGCGCCCCAGGCTGGACTGAGCCC...CCAGACCCTGGCATGGGATGGGCTGGGATCTTCTCTGTGAATCCACCCCTGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp CCCGAGGAAGGGGAGGAGGAAGAGGAGGAAGGCCCTGCCTGGCCTTCCGCTCAGGGGGGTAGCCAGGGGTaGATTCACAGAGAAGATCCC +
Preference number: 4 (lower is better)
Translates to: PEEGEEEEEEGPAWPSAQGGSQG*IHREDP
Trigger: GGGATCTTCTCTGTGAATCCACCCCTGGCTACCCCC...CTGAGCGGAAGGCCAGGCAGGGCCTTCCTCCTCTTCCTCCTCCCCTTCCTCGGG
64% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp GGCCTGTGCCATGGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTTGTGGGCTGGCTTCTTaGCAGGTCCCCACCGGCTTT +
Preference number: 4 (lower is better)
Translates to: GLCHGSQAPAGSSYLPSACGLAS*QVPTGF
Trigger: AAAGCCGGTGGGGACCTGCCAAGAAGCCAGCCCACA...AGCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCCATGGCACAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371699.5
CDS-3UTR CCA 90 bp AAGGCCCTGCCTGGCCTTCCGCTCAGTCACCCCGAGGTGGTTTCTGGACCCCCACATGGCCTTGTGGGCTaGCTTCTTGGCAGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: KALPGLPLSHPEVVSGPPHGLVG*LLGRSP
Trigger: TGGGGACCTGCCAAGAAGCCAGCCCACAAGGCCATG...TGGGGGTCCAGAAACCACCTCGGGGTGACTGAGCGGAAGGCCAGGCAGGGCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371699.5
CDS-3UTR CCA 90 bp CAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTGGCCTTGGGATGCCGTGCGTGGAGGAGTCCATaGCCTTGTGGGCTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: QGARTFPQLRAHLALGCRAWRSP*PCGLAS
Trigger: AGAAGCCAGCCCACAAGGCCATGGACTCCTCCACGC...ACGGCATCCCAAGGCCAGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371699.5
CDS-3UTR CCA 90 bp TGCCATGGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCAGAGTGCGGGAGGGATaGGGCTTCCTGTTTACCCCG +
Preference number: 4 (lower is better)
Translates to: CHGSQAPAGSSYLPSAEGRVREG*GFLFTP
Trigger: CGGGGTAAACAGGAAGCCCCATCCCTCCCGCACTCT...GCCCTCAGCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCCATGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371699.5
CDS-3UTR TCA 90 bp GAGCCTCCCGAGGAAGGGGAGGAGGAAGAGGAGGAAGGCCCTGCCTGGCCTTCCCAGAGCGACACCCTCTaGGTTGAGGGGCTTCCATTT +
Preference number: 4 (lower is better)
Translates to: EPPEEGEEEEEEGPAWPSQSDTL*VEGLPF
Trigger: AAATGGAAGCCCCTCAACTCAGAGGGTGTCGCTCTG...GGAAGGCCAGGCAGGGCCTTCCTCCTCTTCCTCCTCCCCTTCCTCGGGAGGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371699.5
CDS-3UTR GCA 90 bp TGGCCTGTGCCATGGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCCTCTGTGCCGCCCACTaGCAACACCAGAAGCCACAT +
Preference number: 4 (lower is better)
Translates to: WPVPWVPGSSRELVPSLSLCAAH*QHQKPH
Trigger: ATGTGGCTTCTGGTGTTGGCAGTGGGCGGCACAGAG...GCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCCATGGCACAGGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR GCA 90 bp AAGGCCCTGCCTGGCCTTCCGCTCAGTCACCCCGAGGTGGTTTCTGGACCCCCACTCTGTGCCGCCCACTaGCAACACCAGAAGCCACAT +
Preference number: 4 (lower is better)
Translates to: KALPGLPLSHPEVVSGPPLCAAH*QHQKPH
Trigger: ATGTGGCTTCTGGTGTTGGCAGTGGGCGGCACAGAG...TGGGGGTCCAGAAACCACCTCGGGGTGACTGAGCGGAAGGCCAGGCAGGGCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR GCA 90 bp CAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTGGCCTTGGGATGCCGTCTCTGTGCCGCCCACTaGCAACACCAGAAGCCACAT +
Preference number: 4 (lower is better)
Translates to: QGARTFPQLRAHLALGCRLCAAH*QHQKPH
Trigger: ATGTGGCTTCTGGTGTTGGCAGTGGGCGGCACAGAG...ACGGCATCCCAAGGCCAGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR GCA 90 bp CAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTGGCCTTGGGATGCCGTGGCTGGTACACACGCTaGACGAACGACTCGGAGACA +
Preference number: 4 (lower is better)
Translates to: QGARTFPQLRAHLALGCRGWYTR*TNDSET
Trigger: TGTCTCCGAGTCGTTCGTGCAGCGTGTGTACCAGCC...ACGGCATCCCAAGGCCAGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR GCA 90 bp TGGCCTGTGCCATGGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCGGCTGGTACACACGCTaGACGAACGACTCGGAGACA +
Preference number: 4 (lower is better)
Translates to: WPVPWVPGSSRELVPSLSGWYTR*TNDSET
Trigger: TGTCTCCGAGTCGTTCGTGCAGCGTGTGTACCAGCC...GCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCCATGGCACAGGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR GCA 90 bp TGGCCTGTGCCATGGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCACAGAGTGTACCGTCTaGAGACAGGCTGTGCCCCTC +
Preference number: 4 (lower is better)
Translates to: WPVPWVPGSSRELVPSLSTECTV*RQAVPL
Trigger: GAGGGGCACAGCCTGTCTGCAGACGGTACACTCTGT...GCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCCATGGCACAGGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR GCA 90 bp GGCCTGTGCCATGGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTACAGAGTGTACCGTCTaGAGACAGGCTGTGCCCCTC +
Preference number: 4 (lower is better)
Translates to: GLCHGSQAPAGSSYLPSATECTV*RQAVPL
Trigger: GAGGGGCACAGCCTGTCTGCAGACGGTACACTCTGT...AGCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCCATGGCACAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR GCA 90 bp AAGGCCCTGCCTGGCCTTCCGCTCAGTCACCCCGAGGTGGTTTCTGGACCCCCAAGGTCCACCCTGGACTaGAGCCTCTGCACTTCTTCC +
Preference number: 4 (lower is better)
Translates to: KALPGLPLSHPEVVSGPPRSTLD*SLCTSS
Trigger: GGAAGAAGTGCAGAGGCTGCAGTCCAGGGTGGACCT...TGGGGGTCCAGAAACCACCTCGGGGTGACTGAGCGGAAGGCCAGGCAGGGCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR GCA 90 bp TGCCATGGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCAGGTCCACCCTGGACTaGAGCCTCTGCACTTCTTCC +
Preference number: 4 (lower is better)
Translates to: CHGSQAPAGSSYLPSAEGRSTLD*SLCTSS
Trigger: GGAAGAAGTGCAGAGGCTGCAGTCCAGGGTGGACCT...GCCCTCAGCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCCATGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR GCA 90 bp CCTCCCGAGGAAGGGGAGGAGGAAGAGGAGGAAGGCCCTGCCTGGCCTTCCGCTGTCACGAGTCTTTCTTaGAGGAGCAGGACCCCAGCT +
Preference number: 4 (lower is better)
Translates to: PPEEGEEEEEEGPAWPSAVTSLS*RSRTPA
Trigger: AGCTGGGGTCCTGCTCCTGCAAGAAAGACTCGTGAC...AGCGGAAGGCCAGGCAGGGCCTTCCTCCTCTTCCTCCTCCCCTTCCTCGGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR GCA 90 bp GCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTGGCCTTGGGATGCCGGTCACGAGTCTTTCTTaGAGGAGCAGGACCCCAGCT +
Preference number: 4 (lower is better)
Translates to: AGSSYLPSAEGPPGLGMPVTSLS*RSRTPA
Trigger: AGCTGGGGTCCTGCTCCTGCAAGAAAGACTCGTGAC...CGGCATCCCAAGGCCAGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp GGCCTGTGCCATGGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGCTGTGTCCTGGGACTaGAGATGGACCCTAGCCCTT +
Preference number: 4 (lower is better)
Translates to: GLCHGSQAPAGSSYLPSAAVSWD*RWTLAL
Trigger: AAGGGCTAGGGTCCATCTCCAGTCCCAGGACACAGC...AGCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCCATGGCACAGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000308874.12
ENST00000406555.7
CDS-3UTR CCA 90 bp CTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTGGCCTTGGGACTACAGATGTGGCTTTaGGGTTCCTCTCCCTCGGGG +
Preference number: 4 (lower is better)
Translates to: LQQGARTFPQLRAHLALGLQMWL*GSSPSG
Trigger: CCCCGAGGGAGAGGAACCCCAAAGCCACATCTGTAG...TCCCAAGGCCAGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTGCTGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308874.12
CDS-3UTR CCA 90 bp TGGCCTGTGCCATGGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCGTCCTGGGGGCTGCCTaGATTCACACTGCTCATCCT +
Preference number: 4 (lower is better)
Translates to: WPVPWVPGSSRELVPSLSVLGAA*IHTAHP
Trigger: AGGATGAGCAGTGTGAATCCAGGCAGCCCCCAGGAC...GCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCCATGGCACAGGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000308874.12
CDS-3UTR CCA 90 bp CTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTGGCCTTGGGACTCCTCTGGGTGGCCTaGCGGAGGAGAATCAGTCAT +
Preference number: 4 (lower is better)
Translates to: LQQGARTFPQLRAHLALGLLWVA*RRRISH
Trigger: ATGACTGATTCTCCTCCGCCAGGCCACCCAGAGGAG...TCCCAAGGCCAGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTGCTGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308874.12
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp TGGCCTGTGCCATGGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCCTCCTCTGGGTGGCCTaGCGGAGGAGAATCAGTCAT +
Preference number: 4 (lower is better)
Translates to: WPVPWVPGSSRELVPSLSLLWVA*RRRISH
Trigger: ATGACTGATTCTCCTCCGCCAGGCCACCCAGAGGAG...GCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCCATGGCACAGGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308874.12
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp GCCTTCCGCTCAGTCACCCCGAGGTGGTTTCTGGACCCCCAGCATGTTGGGCAGGCCTTCTCCTCTGGGTaGCCTGGCGGAGGAGAATCA +
Preference number: 4 (lower is better)
Translates to: AFRSVTPRWFLDPQHVGQAFSSG*PGGGES
Trigger: TGATTCTCCTCCGCCAGGCCACCCAGAGGAGAAGGC...CTGCCCAACATGCTGGGGGTCCAGAAACCACCTCGGGGTGACTGAGCGGAAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000308874.12
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp TGTGCCATGGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCTTCTCCTCTGGGTaGCCTGGCGGAGGAGAATCA +
Preference number: 4 (lower is better)
Translates to: CAMGPRLQQGARTFPQLRAFSSG*PGGGES
Trigger: TGATTCTCCTCCGCCAGGCCACCCAGAGGAGAAGGC...CCTCAGCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCCATGGCACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000308874.12
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp AGCCAGGGGTGGATTCACAGAGAAGATCCCAGCCCATCCCATGCCAGGGTCTGGGGTGGCCTTCTCCTCTaGGTGGCCTGGCGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: SQGWIHREDPSPSHARVWGGLLL*VAWRRR
Trigger: TCTCCTCCGCCAGGCCACCCAGAGGAGAAGGCCACC...CCAGACCCTGGCATGGGATGGGCTGGGATCTTCTCTGTGAATCCACCCCTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000308874.12
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp CCTCCCGAGGAAGGGGAGGAGGAAGAGGAGGAAGGCCCTGCCTGGCCTTCCGCTAGGCGGTCCTATAGATaGTTCGGTAGGTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: PPEEGEEEEEEGPAWPSARRSYR*FGRCCR
Trigger: CCTGCAGCACCTACCGAACCATCTATAGGACCGCCT...AGCGGAAGGCCAGGCAGGGCCTTCCTCCTCTTCCTCCTCCCCTTCCTCGGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp CCCGAGGAAGGGGAGGAGGAAGAGGAGGAAGGCCCTGCCTGGCCTTCCGCTCAGAGGCGGTCCTATAGATaGTTCGGTAGGTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: PEEGEEEEEEGPAWPSAQRRSYR*FGRCCR
Trigger: CCTGCAGCACCTACCGAACCATCTATAGGACCGCCT...CTGAGCGGAAGGCCAGGCAGGGCCTTCCTCCTCTTCCTCCTCCCCTTCCTCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp CAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTGGCCTTGGGATGCCGTTTCCGGCATGGCGGCTaGCATATTGCTGCTCCACAG +
Preference number: 4 (lower is better)
Translates to: QGARTFPQLRAHLALGCRFRHGG*HIAAPQ
Trigger: CTGTGGAGCAGCAATATGCCAGCCGCCATGCCGGAA...ACGGCATCCCAAGGCCAGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp GGGGGTAGCCAGGGGTGGATTCACAGAGAAGATCCCAGCCCATCCCATGCCAGGATGCGGCCGAGCTGCTaGAAGGAGTGCACCAGGAGG +
Preference number: 4 (lower is better)
Translates to: GGSQGWIHREDPSPSHARMRPSC*KECTRR
Trigger: CCTCCTGGTGCACTCCTTCCAGCAGCTCGGCCGCAT...CCTGGCATGGGATGGGCTGGGATCTTCTCTGTGAATCCACCCCTGGCTACCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp GCCTTCCGCTCAGTCACCCCGAGGTGGTTTCTGGACCCCCAGCATGTTGGGCAGTCCAGCCTGGGGCGCTaGGCAGTCACGAGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: AFRSVTPRWFLDPQHVGQSSLGR*AVTSLS
Trigger: AGAAAGACTCGTGACTGCCCAGCGCCCCAGGCTGGA...CTGCCCAACATGCTGGGGGTCCAGAAACCACCTCGGGGTGACTGAGCGGAAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp CTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTGGCCTTGGGATCAGTCACCCCGAGGTaGTTTCTGGACCCCCAGCAT +
Preference number: 4 (lower is better)
Translates to: LQQGARTFPQLRAHLALGSVTPR*FLDPQH
Trigger: ATGCTGGGGGTCCAGAAACCACCTCGGGGTGACTGA...TCCCAAGGCCAGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTGCTGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp CAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTGGCCTTGGGATGCCGTTCAGTCACCCCGAGGTaGTTTCTGGACCCCCAGCAT +
Preference number: 4 (lower is better)
Translates to: QGARTFPQLRAHLALGCRSVTPR*FLDPQH
Trigger: ATGCTGGGGGTCCAGAAACCACCTCGGGGTGACTGA...ACGGCATCCCAAGGCCAGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp TGGCCTGTGCCATGGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTCAGTCACCCCGAGGTaGTTTCTGGACCCCCAGCAT +
Preference number: 4 (lower is better)
Translates to: WPVPWVPGSSRELVPSLSSVTPR*FLDPQH
Trigger: ATGCTGGGGGTCCAGAAACCACCTCGGGGTGACTGA...GCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCCATGGCACAGGCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp CAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTGGCCTTGGGATGCCGTGGGGGTAGCCAGGGGTaGATTCACAGAGAAGATCCC +
Preference number: 4 (lower is better)
Translates to: QGARTFPQLRAHLALGCRGGSQG*IHREDP
Trigger: GGGATCTTCTCTGTGAATCCACCCCTGGCTACCCCC...ACGGCATCCCAAGGCCAGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp CAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTGGCCTTGGGATGCCGTGAGTCCATGGCCTTGTaGGCTGGCTTCTTGGCAGGT +
Preference number: 4 (lower is better)
Translates to: QGARTFPQLRAHLALGCRESMAL*AGFLAG
Trigger: ACCTGCCAAGAAGCCAGCCCACAAGGCCATGGACTC...ACGGCATCCCAAGGCCAGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371699.5
CDS-3UTR CCA 90 bp CTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTGGCCTTGGGACTCCAGCTGATGGCGTaGAGGAGTCCATGGCCTTGT +
Preference number: 4 (lower is better)
Translates to: LQQGARTFPQLRAHLALGLQLMA*RSPWPC
Trigger: ACAAGGCCATGGACTCCTCCACGCCATCAGCTGGAG...TCCCAAGGCCAGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTGCTGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371699.5
CDS-3UTR CCA 90 bp CCCGAGGAAGGGGAGGAGGAAGAGGAGGAAGGCCCTGCCTGGCCTTCCGCTCAGCAGCCACGGATGTGGTaGAACCTTCCCATCAGAGGA +
Preference number: 4 (lower is better)
Translates to: PEEGEEEEEEGPAWPSAQQPRMW*NLPIRG
Trigger: TCCTCTGATGGGAAGGTTCCACCACATCCGTGGCTG...CTGAGCGGAAGGCCAGGCAGGGCCTTCCTCCTCTTCCTCCTCCCCTTCCTCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371699.5
CDS-3UTR GCA 90 bp GGCCTGTGCCATGGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTCAAGCTGAACTTTGCTaGCAACCACAGGGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: GLCHGSQAPAGSSYLPSAQAELC*QPQGLL
Trigger: GAGCAGCCCCTGTGGTTGGCAGCAAAGTTCAGCTTG...AGCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCCATGGCACAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308874.12
CDS-3UTR GCA 90 bp GGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTTCCAGGAAGGAAATCTaGTCGCTCAGGGAGTCGATG +
Preference number: 4 (lower is better)
Translates to: GSQAPAGSSYLPSAEGPPSRKEI*SLRESM
Trigger: CATCGACTCCCTGAGCGAGCAGATTTCCTTCCTGGA...AGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR GCA 90 bp TGCCATGGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCGTCACGAGTCTTTCTTaGAGGAGCAGGACCCCAGCT +
Preference number: 4 (lower is better)
Translates to: CHGSQAPAGSSYLPSAEGVTSLS*RSRTPA
Trigger: AGCTGGGGTCCTGCTCCTGCAAGAAAGACTCGTGAC...GCCCTCAGCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCCATGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp CAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTGGCCTTGGGATGCCGTAGGCGGTCCTATAGATaGTTCGGTAGGTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: QGARTFPQLRAHLALGCRRRSYR*FGRCCR
Trigger: CCTGCAGCACCTACCGAACCATCTATAGGACCGCCT...ACGGCATCCCAAGGCCAGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp GGCCTGTGCCATGGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTAGGCGGTCCTATAGATaGTTCGGTAGGTGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: GLCHGSQAPAGSSYLPSARRSYR*FGRCCR
Trigger: CCTGCAGCACCTACCGAACCATCTATAGGACCGCCT...AGCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCCATGGCACAGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp GAGCCTCCCGAGGAAGGGGAGGAGGAAGAGGAGGAAGGCCCTGCCTGGCCTTCCTCATCCACATCTGACTaGCAAGTGTCACCCCGCCAT +
Preference number: 4 (lower is better)
Translates to: EPPEEGEEEEEEGPAWPSSSTSD*QVSPRH
Trigger: ATGGCGGGGTGACACTTGCCAGTCAGATGTGGATGA...GGAAGGCCAGGCAGGGCCTTCCTCCTCTTCCTCCTCCCCTTCCTCGGGAGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp CCTCCCGAGGAAGGGGAGGAGGAAGAGGAGGAAGGCCCTGCCTGGCCTTCCGCTTCATCCACATCTGACTaGCAAGTGTCACCCCGCCAT +
Preference number: 4 (lower is better)
Translates to: PPEEGEEEEEEGPAWPSASSTSD*QVSPRH
Trigger: ATGGCGGGGTGACACTTGCCAGTCAGATGTGGATGA...AGCGGAAGGCCAGGCAGGGCCTTCCTCCTCTTCCTCCTCCCCTTCCTCGGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp CCCGAGGAAGGGGAGGAGGAAGAGGAGGAAGGCCCTGCCTGGCCTTCCGCTCAGTCATCCACATCTGACTaGCAAGTGTCACCCCGCCAT +
Preference number: 4 (lower is better)
Translates to: PEEGEEEEEEGPAWPSAQSSTSD*QVSPRH
Trigger: ATGGCGGGGTGACACTTGCCAGTCAGATGTGGATGA...CTGAGCGGAAGGCCAGGCAGGGCCTTCCTCCTCTTCCTCCTCCCCTTCCTCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp AGCCAGGGGTGGATTCACAGAGAAGATCCCAGCCCATCCCATGCCAGGGTCTGGCCCCGAGGTGGTTTCTaGACCCCCAGCATGTTGGGC +
Preference number: 4 (lower is better)
Translates to: SQGWIHREDPSPSHARVWPRGGF*TPSMLG
Trigger: GCCCAACATGCTGGGGGTCCAGAAACCACCTCGGGG...CCAGACCCTGGCATGGGATGGGCTGGGATCTTCTCTGTGAATCCACCCCTGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp GCCTTCCGCTCAGTCACCCCGAGGTGGTTTCTGGACCCCCAGCATGTTGGGCAGTCAGTCACCCCGAGGTaGTTTCTGGACCCCCAGCAT +
Preference number: 4 (lower is better)
Translates to: AFRSVTPRWFLDPQHVGQSVTPR*FLDPQH
Trigger: ATGCTGGGGGTCCAGAAACCACCTCGGGGTGACTGA...CTGCCCAACATGCTGGGGGTCCAGAAACCACCTCGGGGTGACTGAGCGGAAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp GAGCCTCCCGAGGAAGGGGAGGAGGAAGAGGAGGAAGGCCCTGCCTGGCCTTCCTCATTTTTATTGTGCTaGGGGTCAGGCAGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: EPPEEGEEEEEEGPAWPSSFLLC*GSGSSP
Trigger: GGGGCTGCTGCCTGACCCCCAGCACAATAAAAATGA...GGAAGGCCAGGCAGGGCCTTCCTCCTCTTCCTCCTCCCCTTCCTCGGGAGGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp GCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTGGCCTTGGGATGCCGTCATTTTTATTGTGCTaGGGGTCAGGCAGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: AGSSYLPSAEGPPGLGMPSFLLC*GSGSSP
Trigger: GGGGCTGCTGCCTGACCCCCAGCACAATAAAAATGA...CGGCATCCCAAGGCCAGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp TGTGCCATGGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGAGGTCACCAGGGTGCTTTTaGCCTCTGAAGCCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: CAMGPRLQQGARTFPQLRSPGCF*PLKPQE
Trigger: CTCCTGGGGCTTCAGAGGCCAAAAGCACCCTGGTGA...CCTCAGCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCCATGGCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371699.5
CDS-3UTR GCA 90 bp GGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTTGCCTGGATTCACACTaGTCATCCTGGCTACAGATG +
Preference number: 4 (lower is better)
Translates to: GSQAPAGSSYLPSAEGPPCLDSH*SSWLQM
Trigger: CATCTGTAGCCAGGATGAGCAGTGTGAATCCAGGCA...AGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000308874.12
CDS-3UTR GCA 90 bp GGGGGTAGCCAGGGGTGGATTCACAGAGAAGATCCCAGCCCATCCCATGCCAGGACAGAGTGTACCGTCTaGAGACAGGCTGTGCCCCTC +
Preference number: 4 (lower is better)
Translates to: GGSQGWIHREDPSPSHARTECTV*RQAVPL
Trigger: GAGGGGCACAGCCTGTCTGCAGACGGTACACTCTGT...CCTGGCATGGGATGGGCTGGGATCTTCTCTGTGAATCCACCCCTGGCTACCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR GCA 90 bp TGCCATGGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCTCCAGGAAGGAAATCTaGTCGCTCAGGGAGTCGATG +
Preference number: 4 (lower is better)
Translates to: CHGSQAPAGSSYLPSAEGSRKEI*SLRESM
Trigger: CATCGACTCCCTGAGCGAGCAGATTTCCTTCCTGGA...GCCCTCAGCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCCATGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp CCTCCCGAGGAAGGGGAGGAGGAAGAGGAGGAAGGCCCTGCCTGGCCTTCCGCTTCACACTGCTCATCCTaGCTACAGATGTGGCTTTGG +
Preference number: 4 (lower is better)
Translates to: PPEEGEEEEEEGPAWPSASHCSS*LQMWLW
Trigger: CCAAAGCCACATCTGTAGCCAGGATGAGCAGTGTGA...AGCGGAAGGCCAGGCAGGGCCTTCCTCCTCTTCCTCCTCCCCTTCCTCGGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000308874.12
CDS-3UTR CCA 90 bp GGGGGTAGCCAGGGGTGGATTCACAGAGAAGATCCCAGCCCATCCCATGCCAGGGGGGGTAGCCAGGGGTaGATTCACAGAGAAGATCCC +
Preference number: 4 (lower is better)
Translates to: GGSQGWIHREDPSPSHARGGSQG*IHREDP
Trigger: GGGATCTTCTCTGTGAATCCACCCCTGGCTACCCCC...CCTGGCATGGGATGGGCTGGGATCTTCTCTGTGAATCCACCCCTGGCTACCCCC
61% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp CAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTGGCCTTGGGATGCCGTTCATTTTTATTGTGCTaGGGGTCAGGCAGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: QGARTFPQLRAHLALGCRSFLLC*GSGSSP
Trigger: GGGGCTGCTGCCTGACCCCCAGCACAATAAAAATGA...ACGGCATCCCAAGGCCAGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp GGGGGTAGCCAGGGGTGGATTCACAGAGAAGATCCCAGCCCATCCCATGCCAGGCAGCTGGCTCACAGGTaGAAGCCGCTTGTTCAAGGG +
Preference number: 4 (lower is better)
Translates to: GGSQGWIHREDPSPSHARQLAHR*KPLVQG
Trigger: CCCTTGAACAAGCGGCTTCCACCTGTGAGCCAGCTG...CCTGGCATGGGATGGGCTGGGATCTTCTCTGTGAATCCACCCCTGGCTACCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371699.5
CDS-3UTR TCA 90 bp TGTGCCATGGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGAGGCGACACCCTCTGAGTTaGGGGGCTTCCATTTTCAGA +
Preference number: 4 (lower is better)
Translates to: CAMGPRLQQGARTFPQLRRHPLS*GASIFR
Trigger: TCTGAAAATGGAAGCCCCTCAACTCAGAGGGTGTCG...CCTCAGCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCCATGGCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371699.5
CDS-3UTR GCA 90 bp GGGGGTAGCCAGGGGTGGATTCACAGAGAAGATCCCAGCCCATCCCATGCCAGGAGCCAAGCTGAACTTTaGTGCCAACCACAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: GGSQGWIHREDPSPSHARSQAEL*CQPQGL
Trigger: CAGCCCCTGTGGTTGGCAGCAAAGTTCAGCTTGGCT...CCTGGCATGGGATGGGCTGGGATCTTCTCTGTGAATCCACCCCTGGCTACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000308874.12
CDS-3UTR GCA 90 bp TGTGCCATGGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGAGGTCCAGGAAGGAAATCTaGTCGCTCAGGGAGTCGATG +
Preference number: 4 (lower is better)
Translates to: CAMGPRLQQGARTFPQLRSRKEI*SLRESM
Trigger: CATCGACTCCCTGAGCGAGCAGATTTCCTTCCTGGA...CCTCAGCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCCATGGCACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp AGCCAGGGGTGGATTCACAGAGAAGATCCCAGCCCATCCCATGCCAGGGTCTGGGGGGGTAGCCAGGGGTaGATTCACAGAGAAGATCCC +
Preference number: 4 (lower is better)
Translates to: SQGWIHREDPSPSHARVWGGSQG*IHREDP
Trigger: GGGATCTTCTCTGTGAATCCACCCCTGGCTACCCCC...CCAGACCCTGGCATGGGATGGGCTGGGATCTTCTCTGTGAATCCACCCCTGGCT
60% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR GCA 90 bp AGCCAGGGGTGGATTCACAGAGAAGATCCCAGCCCATCCCATGCCAGGGTCTGGGTCACGAGTCTTTCTTaGAGGAGCAGGACCCCAGCT +
Preference number: 4 (lower is better)
Translates to: SQGWIHREDPSPSHARVWVTSLS*RSRTPA
Trigger: AGCTGGGGTCCTGCTCCTGCAAGAAAGACTCGTGAC...CCAGACCCTGGCATGGGATGGGCTGGGATCTTCTCTGTGAATCCACCCCTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR GCA 90 bp AAGGCCCTGCCTGGCCTTCCGCTCAGTCACCCCGAGGTGGTTTCTGGACCCCCAGTTTCATTTTTATTGTaGTGGGGGTCAGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: KALPGLPLSHPEVVSGPPVSFLL*WGSGSS
Trigger: GCTGCTGCCTGACCCCCAGCACAATAAAAATGAAAC...TGGGGGTCCAGAAACCACCTCGGGGTGACTGAGCGGAAGGCCAGGCAGGGCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR GCA 90 bp CAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTGGCCTTGGGATGCCGTGTTTCATTTTTATTGTaGTGGGGGTCAGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: QGARTFPQLRAHLALGCRVSFLL*WGSGSS
Trigger: GCTGCTGCCTGACCCCCAGCACAATAAAAATGAAAC...ACGGCATCCCAAGGCCAGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp AGCCAGGGGTGGATTCACAGAGAAGATCCCAGCCCATCCCATGCCAGGGTCTGGTCATCCACATCTGACTaGCAAGTGTCACCCCGCCAT +
Preference number: 4 (lower is better)
Translates to: SQGWIHREDPSPSHARVWSSTSD*QVSPRH
Trigger: ATGGCGGGGTGACACTTGCCAGTCAGATGTGGATGA...CCAGACCCTGGCATGGGATGGGCTGGGATCTTCTCTGTGAATCCACCCCTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CCA 90 bp AGCCAGGGGTGGATTCACAGAGAAGATCCCAGCCCATCCCATGCCAGGGTCTGGTGTCAGCCACGGATGTaGTGGAACCTTCCCATCAGA +
Preference number: 4 (lower is better)
Translates to: SQGWIHREDPSPSHARVWCQPRM*WNLPIR
Trigger: TCTGATGGGAAGGTTCCACCACATCCGTGGCTGACA...CCAGACCCTGGCATGGGATGGGCTGGGATCTTCTCTGTGAATCCACCCCTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371699.5
CDS-3UTR GCA 90 bp GGGGGTAGCCAGGGGTGGATTCACAGAGAAGATCCCAGCCCATCCCATGCCAGGGTTTCATTTTTATTGTaGTGGGGGTCAGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GGSQGWIHREDPSPSHARVSFLL*WGSGSS
Trigger: GCTGCTGCCTGACCCCCAGCACAATAAAAATGAAAC...CCTGGCATGGGATGGGCTGGGATCTTCTCTGTGAATCCACCCCTGGCTACCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR GCA 90 bp AGCCAGGGGTGGATTCACAGAGAAGATCCCAGCCCATCCCATGCCAGGGTCTGGGTTTCATTTTTATTGTaGTGGGGGTCAGGCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SQGWIHREDPSPSHARVWVSFLL*WGSGSS
Trigger: GCTGCTGCCTGACCCCCAGCACAATAAAAATGAAAC...CCAGACCCTGGCATGGGATGGGCTGGGATCTTCTCTGTGAATCCACCCCTGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS CCA 90 bp GCCCGCTGGTCCTCTTCCAGCCGGGGCAGCACGCGTAGCGAGGCCTaGCAGGGGCCAGCCCAGGGCTGCGGCGGTAGGCGGTCCTATAGA +
Preference number: 5 (lower is better)
Translates to: ARWSSSSRGSTRSEA*QGPAQGCGGRRSYR
Trigger: TCTATAGGACCGCCTACCGCCGCAGCCCTGGGCTGGCCCCTGCCAGGCCTCGCTACGCGTGCTGCCCCGGCTGGAAGAGGACCAGCGGGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
ENST00000492002.1
CDS GCA 90 bp GGGAGTCGATGCGGCCGAGCTGCTGGAAGGAGTGCACCAGGAGGCTaGCGGGGTCCGGGAGCCCATGCTCCAGTGCCTGCGAGGCCAGGC +
Preference number: 5 (lower is better)
Translates to: GSRCGRAAGRSAPGG*RGPGAHAPVPARPG
Trigger: GCCTGGCCTCGCAGGCACTGGAGCATGGGCTCCCGGACCCCGGCAGCCTCCTGGTGCACTCCTTCCAGCAGCTCGGCCGCATCGACTCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS TCA 90 bp GGCTGGTACACACGCTGCACGAACGACTCGGAGACAGGGTCCCCGTaGGCCCGGACAGCACACACCCTACGGCGCCGGATCCGGGGCGCG +
Preference number: 5 (lower is better)
Translates to: GWYTRCTNDSETGSP*ARTAHTLRRRIRGA
Trigger: CGCGCCCCGGATCCGGCGCCGTAGGGTGTGTGCTGTCCGGGCTCACGGGGACCCTGTCTCCGAGTCGTTCGTGCAGCGTGTGTACCAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492002.1
CDS CCA 90 bp GGCCGCTGCTGTGTCCTGGGACTGGAGATGGACCCTAGCCCTTGCTaGGGCCTCAGGCCCACTGGCCGCCTGGAGGCACCTCCTGAGGCC +
Preference number: 5 (lower is better)
Translates to: GRCCVLGLEMDPSPC*GLRPTGRLEAPPEA
Trigger: GGCCTCAGGAGGTGCCTCCAGGCGGCCAGTGGGCCTGAGGCCCCAGCAAGGGCTAGGGTCCATCTCCAGTCCCAGGACACAGCAGCGGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000406555.7
ENST00000490469.5
ENST00000492862.6
CDS CCA 90 bp CCAGGCGTGGCCATGGTGGCCGCTGCTGTGTCCTGGGACTGGAGATaGACCCTAGCCCTTGCTGGGGCCTCAGGCCCACTGGCCGCCTGG +
Preference number: 5 (lower is better)
Translates to: PGVAMVAAAVSWDWR*TLALAGASGPLAAW
Trigger: CCAGGCGGCCAGTGGGCCTGAGGCCCCAGCAAGGGCTAGGGTCCATCTCCAGTCCCAGGACACAGCAGCGGCCACCATGGCCACGCCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000406555.7
ENST00000490469.5
ENST00000492862.6
CDS CCA 90 bp TGCTGCTGGAGCCCAGGCGTGGCCATGGTGGCCGCTGCTGTGTCCTaGGACTGGAGATGGACCCTAGCCCTTGCTGGGGCCTCAGGCCCA +
Preference number: 5 (lower is better)
Translates to: CCWSPGVAMVAAAVS*DWRWTLALAGASGP
Trigger: TGGGCCTGAGGCCCCAGCAAGGGCTAGGGTCCATCTCCAGTCCCAGGACACAGCAGCGGCCACCATGGCCACGCCTGGGCTCCAGCAGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000406555.7
ENST00000490469.5
ENST00000492862.6
CDS CCA 90 bp ATGGCGGCTGGCATATTGCTGCTCCACAGGCCCCAGGAAGCCCGCTaGTCCTCTTCCAGCCGGGGCAGCACGCGTAGCGAGGCCTGGCAG +
Preference number: 5 (lower is better)
Translates to: MAAGILLLHRPQEAR*SSSSRGSTRSEAWQ
Trigger: CTGCCAGGCCTCGCTACGCGTGCTGCCCCGGCTGGAAGAGGACCAGCGGGCTTCCTGGGGCCTGTGGAGCAGCAATATGCCAGCCGCCAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
ENST00000492002.1
CDS-3UTR CAA 90 bp GAGCCTCCCGAGGAAGGGGAGGAGGAAGAGGAGGAAGGCCCTGCCTGGCCTTCCAGGGCCCACCTGGCCTaGGGATGCCGTTGGGGTAGC +
Preference number: 5 (lower is better)
Translates to: EPPEEGEEEEEEGPAWPSRAHLA*GCRWGS
Trigger: GCTACCCCAACGGCATCCCAAGGCCAGGTGGGCCCT...GGAAGGCCAGGCAGGGCCTTCCTCCTCTTCCTCCTCCCCTTCCTCGGGAGGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS TCA 90 bp CTGGCCGCTCCCGTCTCCCTTCCTGGGGCTGCCCACTGCTCCAGCTaGTGGCGTGGAGGAGTCCATGGCCTTGTGGGCTGGCTTCTTGGC +
Preference number: 5 (lower is better)
Translates to: LAAPVSLPGAAHCSS*WRGGVHGLVGWLLG
Trigger: GCCAAGAAGCCAGCCCACAAGGCCATGGACTCCTCCACGCCATCAGCTGGAGCAGTGGGCAGCCCCAGGAAGGGAGACGGGAGCGGCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371699.5
CDS GCA 90 bp GCTGCTCTGATGCTGCTGGAGCCCAGGCGTGGCCATGGTGGCCGCTaGTGTGTCCTGGGACTGGAGATGGACCCTAGCCCTTGCTGGGGC +
Preference number: 5 (lower is better)
Translates to: AALMLLEPRRGHGGR*CVLGLEMDPSPCWG
Trigger: GCCCCAGCAAGGGCTAGGGTCCATCTCCAGTCCCAGGACACAGCAGCGGCCACCATGGCCACGCCTGGGCTCCAGCAGCATCAGAGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308874.12
ENST00000492862.6
CDS GCA 90 bp CAGAAGCCACATCAGCAGCACCTCCTGAGAGCCCCTCATGGCCTGTaGCTCCAGGCGGGGTGGCCTTCTCCTCTGGGTGGCCGCCGGATC +
Preference number: 5 (lower is better)
Translates to: QKPHQQHLLRAPHGL*LQAGWPSPLGGRRI
Trigger: GATCCGGCGGCCACCCAGAGGAGAAGGCCACCCCGCCTGGAGGCACAGGCCATGAGGGGCTCTCAGGAGGTGCTGCTGATGTGGCTTCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371698.3
CDS CCA 90 bp CAAGTGTCACCCCGCCATCCTGCAGGGCAGCGGCAGCGGCCAGGCTaGACACAGCTCCCTCCGTTCCGGCATGGCGGCTGGCATATTGCT +
Preference number: 5 (lower is better)
Translates to: QVSPRHPAGQRQRPG*TQLPPFRHGGWHIA
Trigger: AGCAATATGCCAGCCGCCATGCCGGAACGGAGGGAGCTGTGTCCAGCCTGGCCGCTGCCGCTGCCCTGCAGGATGGCGGGGTGACACTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
ENST00000492002.1
CDS CCA 90 bp GGGGTGCCTGCGGGCAGAGGAGCCGTCTGCTCCCGAGCGAGGGTTTaGGCAGGGAGAAGTGAGGGTCCCCAGCCTTTCCTCTCACCTCTC +
Preference number: 5 (lower is better)
Translates to: GVPAGRGAVCSRARV*AGRSEGPQPFLSPL
Trigger: GAGAGGTGAGAGGAAAGGCTGGGGACCCTCACTTCTCCCTGCCCAAACCCTCGCTCGGGAGCAGACGGCTCCTCTGCCCGCAGGCACCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371699.5
CDS-3UTR CAA 90 bp AAGGCCCTGCCTGGCCTTCCGCTCAGTCACCCCGAGGTGGTTTCTGGACCCCCAAGGGCCCACCTGGCCTaGGGATGCCGTTGGGGTAGC +
Preference number: 5 (lower is better)
Translates to: KALPGLPLSHPEVVSGPPRAHLA*GCRWGS
Trigger: GCTACCCCAACGGCATCCCAAGGCCAGGTGGGCCCT...TGGGGGTCCAGAAACCACCTCGGGGTGACTGAGCGGAAGGCCAGGCAGGGCCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CAA 90 bp TGCCATGGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCAGGGCCCACCTGGCCTaGGGATGCCGTTGGGGTAGC +
Preference number: 5 (lower is better)
Translates to: CHGSQAPAGSSYLPSAEGRAHLA*GCRWGS
Trigger: GCTACCCCAACGGCATCCCAAGGCCAGGTGGGCCCT...GCCCTCAGCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCCATGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS TCA 90 bp TCCCCGGGCCCCCGTTGGGTTGCTCATCCACTGCTAGGGAGAAGATaGGGAGACCTCAGCCCTCGGGACACCGCAGGGCGTAGCGCGAAG +
Preference number: 5 (lower is better)
Translates to: SPGPRWVAHPLLGRR*GDLSPRDTAGRSAK
Trigger: CTTCGCGCTACGCCCTGCGGTGTCCCGAGGGCTGAGGTCTCCTCATCTTCTCCCTAGCAGTGGATGAGCAACCCAACGGGGGCCCGGGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000308874.12
ENST00000492862.6
CDS GCA 90 bp ACACACCCTACGGCCGGGCCGGTAGGCGTGCTCTGTGCCGCCCACTaGCAACACCAGAAGCCACATCAGCAGCACCTCCTGAGAGCCCCT +
Preference number: 5 (lower is better)
Translates to: THPTAGPVGVLCAAH*QHQKPHQQHLLRAP
Trigger: AGGGGCTCTCAGGAGGTGCTGCTGATGTGGCTTCTGGTGTTGGCAGTGGGCGGCACAGAGCACGCCTACCGGCCCGGCCGTAGGGTGTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
ENST00000492862.6
CDS CCA 90 bp TCCCGTCTCCCTTCCTGGGGCTGCCCACTGCTCCAGCTGATGGCGTaGAGGAGTCCATGGCCTTGTGGGCTGGCTTCTTGGCAGGTCCCC +
Preference number: 5 (lower is better)
Translates to: SRLPSWGCPLLQLMA*RSPWPCGLASWQVP
Trigger: GGGGACCTGCCAAGAAGCCAGCCCACAAGGCCATGGACTCCTCCACGCCATCAGCTGGAGCAGTGGGCAGCCCCAGGAAGGGAGACGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371699.5
CDS-3UTR CAA 90 bp CCTCCCGAGGAAGGGGAGGAGGAAGAGGAGGAAGGCCCTGCCTGGCCTTCCGCTATGGCGGCTGGCATATaGCTGCTCCACAGGCCCCAG +
Preference number: 5 (lower is better)
Translates to: PPEEGEEEEEEGPAWPSAMAAGI*LLHRPQ
Trigger: CTGGGGCCTGTGGAGCAGCAATATGCCAGCCGCCAT...AGCGGAAGGCCAGGCAGGGCCTTCCTCCTCTTCCTCCTCCCCTTCCTCGGGAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS TCA 90 bp GGCTGGTACACACGCTGCACGAACGACTCGGAGACAGGGTCCCCGTaGGCCCGGACAGCACACACCCTACGGCTGGCGGAGGAGAATCAG +
Preference number: 5 (lower is better)
Translates to: GWYTRCTNDSETGSP*ARTAHTLRLAEENQ
Trigger: CTGATTCTCCTCCGCCAGCCGTAGGGTGTGTGCTGTCCGGGCTCACGGGGACCCTGTCTCCGAGTCGTTCGTGCAGCGTGTGTACCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490469.5
CDS GCA 90 bp CCAGCTGCTCCTCCAGGAAGGAAATCTGCTCGCTCAGGGAGTCGATaGGGCCGAGCTGCTGGAAGGAGTGCACCAGGAGGCTGCCGGGGT +
Preference number: 5 (lower is better)
Translates to: PAAPPGRKSARSGSR*GRAAGRSAPGGCRG
Trigger: ACCCCGGCAGCCTCCTGGTGCACTCCTTCCAGCAGCTCGGCCGCATCGACTCCCTGAGCGAGCAGATTTCCTTCCTGGAGGAGCAGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS CCA 90 bp TCCTGGGGCTGCCCACTGCTCCAGCTGATGGCGTGGAGGAGTCCATaGCCTTGTGGGCTGGCTTCTTGGCAGGTCCCCACCGGCTTTGCA +
Preference number: 5 (lower is better)
Translates to: SWGCPLLQLMAWRSP*PCGLASWQVPTGFA
Trigger: TGCAAAGCCGGTGGGGACCTGCCAAGAAGCCAGCCCACAAGGCCATGGACTCCTCCACGCCATCAGCTGGAGCAGTGGGCAGCCCCAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371699.5
CDS-3UTR CAA 90 bp GGGGGTAGCCAGGGGTGGATTCACAGAGAAGATCCCAGCCCATCCCATGCCAGGCTCCCCGGGCCCCCGTaGGGTTGCTCATCCACTGCT +
Preference number: 5 (lower is better)
Translates to: GGSQGWIHREDPSPSHARLPGPP*GCSSTA
Trigger: AGCAGTGGATGAGCAACCCAACGGGGGCCCGGGGAG...CCTGGCATGGGATGGGCTGGGATCTTCTCTGTGAATCCACCCCTGGCTACCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000308874.12
CDS-3UTR CAA 90 bp CAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTGGCCTTGGGATGCCGTATGGCGGCTGGCATATaGCTGCTCCACAGGCCCCAG +
Preference number: 5 (lower is better)
Translates to: QGARTFPQLRAHLALGCRMAAGI*LLHRPQ
Trigger: CTGGGGCCTGTGGAGCAGCAATATGCCAGCCGCCAT...ACGGCATCCCAAGGCCAGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CAA 90 bp TGCCATGGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCATGGCGGCTGGCATATaGCTGCTCCACAGGCCCCAG +
Preference number: 5 (lower is better)
Translates to: CHGSQAPAGSSYLPSAEGMAAGI*LLHRPQ
Trigger: CTGGGGCCTGTGGAGCAGCAATATGCCAGCCGCCAT...GCCCTCAGCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCCATGGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CAA 90 bp GGAGCCTCCCGAGGAAGGGGAGGAGGAAGAGGAGGAAGGCCCTGCCTGGCCTTCGAGGAGTCCATGGCCTaGTGGGCTGGCTTCTTGGCA +
Preference number: 5 (lower is better)
Translates to: GASRGRGGGRGGRPCLAFEESMA*WAGFLA
Trigger: TGCCAAGAAGCCAGCCCACAAGGCCATGGACTCCTC...GAAGGCCAGGCAGGGCCTTCCTCCTCTTCCTCCTCCCCTTCCTCGGGAGGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371699.5
CDS-3UTR CAA 90 bp CCTCCCGAGGAAGGGGAGGAGGAAGAGGAGGAAGGCCCTGCCTGGCCTTCCGCTCTCACCAGGGTGCTTTaGGCCTCTGAAGCCCCAGGA +
Preference number: 5 (lower is better)
Translates to: PPEEGEEEEEEGPAWPSALTRVL*ASEAPG
Trigger: TCCTGGGGCTTCAGAGGCCAAAAGCACCCTGGTGAG...AGCGGAAGGCCAGGCAGGGCCTTCCTCCTCTTCCTCCTCCCCTTCCTCGGGAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371699.5
CDS TCA 90 bp AGATGGTTCGGTAGGTGCTGCAGGCCCGGTGCCCGTCGCAGGTGGTaGGGAAGGGCTGGTACACACGCTGCACGAACGACTCGGAGACAG +
Preference number: 5 (lower is better)
Translates to: RWFGRCCRPGARRRW*GRAGTHAARTTRRQ
Trigger: CTGTCTCCGAGTCGTTCGTGCAGCGTGTGTACCAGCCCTTCCTCACCACCTGCGACGGGCACCGGGCCTGCAGCACCTACCGAACCATCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
ENST00000490469.5
ENST00000492002.1
CDS-3UTR CAA 90 bp GGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTAGTCACGAGTCTTTCTaGCAGGAGCAGGACCCCAGC +
Preference number: 5 (lower is better)
Translates to: GSQAPAGSSYLPSAEGPPSHESF*QEQDPS
Trigger: GCTGGGGTCCTGCTCCTGCAAGAAAGACTCGTGACT...AGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CAA 90 bp GGAGCCTCCCGAGGAAGGGGAGGAGGAAGAGGAGGAAGGCCCTGCCTGGCCTTCAGTCACGAGTCTTTCTaGCAGGAGCAGGACCCCAGC +
Preference number: 5 (lower is better)
Translates to: GASRGRGGGRGGRPCLAFSHESF*QEQDPS
Trigger: GCTGGGGTCCTGCTCCTGCAAGAAAGACTCGTGACT...GAAGGCCAGGCAGGGCCTTCCTCCTCTTCCTCCTCCCCTTCCTCGGGAGGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CAA 90 bp GCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTGGCCTTGGGATGCCGAGTCACGAGTCTTTCTaGCAGGAGCAGGACCCCAGC +
Preference number: 5 (lower is better)
Translates to: AGSSYLPSAEGPPGLGMPSHESF*QEQDPS
Trigger: GCTGGGGTCCTGCTCCTGCAAGAAAGACTCGTGACT...CGGCATCCCAAGGCCAGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CAA 90 bp AGCCAGGGGTGGATTCACAGAGAAGATCCCAGCCCATCCCATGCCAGGGTCTGGAGGGCCCACCTGGCCTaGGGATGCCGTTGGGGTAGC +
Preference number: 5 (lower is better)
Translates to: SQGWIHREDPSPSHARVWRAHLA*GCRWGS
Trigger: GCTACCCCAACGGCATCCCAAGGCCAGGTGGGCCCT...CCAGACCCTGGCATGGGATGGGCTGGGATCTTCTCTGTGAATCCACCCCTGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CAA 90 bp GCCTTCCGCTCAGTCACCCCGAGGTGGTTTCTGGACCCCCAGCATGTTGGGCAGTTGTGGGCTGGCTTCTaGGCAGGTCCCCACCGGCTT +
Preference number: 5 (lower is better)
Translates to: AFRSVTPRWFLDPQHVGQLWAGF*AGPHRL
Trigger: AAGCCGGTGGGGACCTGCCAAGAAGCCAGCCCACAA...CTGCCCAACATGCTGGGGGTCCAGAAACCACCTCGGGGTGACTGAGCGGAAGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371699.5
CDS-3UTR CAA 90 bp GCCTTCCGCTCAGTCACCCCGAGGTGGTTTCTGGACCCCCAGCATGTTGGGCAGGCTACAGATGTGGCTTaGGGGTTCCTCTCCCTCGGG +
Preference number: 5 (lower is better)
Translates to: AFRSVTPRWFLDPQHVGQATDVA*GFLSLG
Trigger: CCCGAGGGAGAGGAACCCCAAAGCCACATCTGTAGC...CTGCCCAACATGCTGGGGGTCCAGAAACCACCTCGGGGTGACTGAGCGGAAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000308874.12
CDS-3UTR CAA 90 bp TGCCATGGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCACAGGTGGAAGCCGCTaGTTCAAGGGTGGAAAACGG +
Preference number: 5 (lower is better)
Translates to: CHGSQAPAGSSYLPSAEGTGGSR*FKGGKR
Trigger: CCGTTTTCCACCCTTGAACAAGCGGCTTCCACCTGT...GCCCTCAGCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCCATGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371699.5
CDS-3UTR CAA 90 bp GGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTCACGTTTCATTTTTATaGTGCTGGGGGTCAGGCAGC +
Preference number: 5 (lower is better)
Translates to: GSQAPAGSSYLPSAEGPPHVSFL*CWGSGS
Trigger: GCTGCCTGACCCCCAGCACAATAAAAATGAAACGTG...AGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CAA 90 bp AGCCAGGGGTGGATTCACAGAGAAGATCCCAGCCCATCCCATGCCAGGGTCTGGAGTCACGAGTCTTTCTaGCAGGAGCAGGACCCCAGC +
Preference number: 5 (lower is better)
Translates to: SQGWIHREDPSPSHARVWSHESF*QEQDPS
Trigger: GCTGGGGTCCTGCTCCTGCAAGAAAGACTCGTGACT...CCAGACCCTGGCATGGGATGGGCTGGGATCTTCTCTGTGAATCCACCCCTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CAA 90 bp TGCCATGGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCACGTTTCATTTTTATaGTGCTGGGGGTCAGGCAGC +
Preference number: 5 (lower is better)
Translates to: CHGSQAPAGSSYLPSAEGHVSFL*CWGSGS
Trigger: GCTGCCTGACCCCCAGCACAATAAAAATGAAACGTG...GCCCTCAGCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCCATGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CAA 90 bp CTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGAGGGCCCACCTGGCCTTGGGACACGTTTCATTTTTATaGTGCTGGGGGTCAGGCAGC +
Preference number: 5 (lower is better)
Translates to: LQQGARTFPQLRAHLALGHVSFL*CWGSGS
Trigger: GCTGCCTGACCCCCAGCACAATAAAAATGAAACGTG...TCCCAAGGCCAGGTGGGCCCTCAGCTGAGGGAAGGTACGAGCTCCCTGCTGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS-3UTR CAA 90 bp GGGGGTAGCCAGGGGTGGATTCACAGAGAAGATCCCAGCCCATCCCATGCCAGGGCGACACCCTCTGAGTaGAGGGGCTTCCATTTTCAG +
Preference number: 5 (lower is better)
Translates to: GGSQGWIHREDPSPSHARATPSE*RGFHFQ
Trigger: CTGAAAATGGAAGCCCCTCAACTCAGAGGGTGTCGC...CCTGGCATGGGATGGGCTGGGATCTTCTCTGTGAATCCACCCCTGGCTACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000371699.5
CDS-3UTR CAA 90 bp TGTGCCATGGGTCCCAGGCTCCAGCAGGGAGCTCGTACCTTCCCTCAGCTGAGGCACGTTTCATTTTTATaGTGCTGGGGGTCAGGCAGC +
Preference number: 5 (lower is better)
Translates to: CAMGPRLQQGARTFPQLRHVSFL*CWGSGS
Trigger: GCTGCCTGACCCCCAGCACAATAAAAATGAAACGTG...CCTCAGCTGAGGGAAGGTACGAGCTCCCTGCTGGAGCCTGGGACCCATGGCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS CCA 72 bp CCCCGCCATCCTGCAGGGCAGCGGCAGCGGCCAGGCTaGACACAGCTCCCTCCGTTCCGGCATGGCGGCTGG +
Preference number: 6 (lower is better)
Translates to: PRHPAGQRQRPG*TQLPPFRHGGW
Trigger: CCAGCCGCCATGCCGGAACGGAGGGAGCTGTGTCCAGCCTGGCCGCTGCCGCTGCCCTGCAGGATGGCGGGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
ENST00000492002.1
CDS CCA 72 bp CTTCCCATCAGAGGACGTCCCGGACCCGACGGGGGCTaGAGGGAGCTGCCAGGCAGGGGTGCCTGCGGGCAG +
Preference number: 6 (lower is better)
Translates to: LPIRGRPGPDGG*RELPGRGACGQ
Trigger: CTGCCCGCAGGCACCCCTGCCTGGCAGCTCCCTCCAGCCCCCGTCGGGTCCGGGACGTCCTCTGATGGGAAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371699.5
CDS GCA 72 bp TGCGGCCGAGCTGCTGGAAGGAGTGCACCAGGAGGCTaGCGGGGTCCGGGAGCCCATGCTCCAGTGCCTGCG +
Preference number: 6 (lower is better)
Translates to: CGRAAGRSAPGG*RGPGAHAPVPA
Trigger: CGCAGGCACTGGAGCATGGGCTCCCGGACCCCGGCAGCCTCCTGGTGCACTCCTTCCAGCAGCTCGGCCGCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS GCA 72 bp TGCCAGGCAGGGGTGCCTGCGGGCAGAGGAGCCGTCTaGTCCCGAGCGAGGGTTTGGGCAGGGAGAAGTGAG +
Preference number: 6 (lower is better)
Translates to: CQAGVPAGRGAV*SRARVWAGRSE
Trigger: CTCACTTCTCCCTGCCCAAACCCTCGCTCGGGAGCAGACGGCTCCTCTGCCCGCAGGCACCCCTGCCTGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371699.5
CDS CCA 72 bp GCGGCCAGGCTGGACACAGCTCCCTCCGTTCCGGCATaGCGGCTGGCATATTGCTGCTCCACAGGCCCCAGG +
Preference number: 6 (lower is better)
Translates to: AARLDTAPSVPA*RLAYCCSTGPR
Trigger: CCTGGGGCCTGTGGAGCAGCAATATGCCAGCCGCCATGCCGGAACGGAGGGAGCTGTGTCCAGCCTGGCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
ENST00000492002.1
CDS GCA 72 bp ACGGCCGGGCCGGTAGGCGTGCTCTGTGCCGCCCACTaGCAACACCAGAAGCCACATCAGCAGCACCTCCTG +
Preference number: 6 (lower is better)
Translates to: TAGPVGVLCAAH*QHQKPHQQHLL
Trigger: CAGGAGGTGCTGCTGATGTGGCTTCTGGTGTTGGCAGTGGGCGGCACAGAGCACGCCTACCGGCCCGGCCGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
ENST00000492862.6
CDS CCA 72 bp CGGCCTCGGACGGGCTGGCTCTGTCAGCCACGGATGTaGTGGAACCTTCCCATCAGAGGACGTCCCGGACCC +
Preference number: 6 (lower is better)
Translates to: RPRTGWLCQPRM*WNLPIRGRPGP
Trigger: GGGTCCGGGACGTCCTCTGATGGGAAGGTTCCACCACATCCGTGGCTGACAGAGCCAGCCCGTCCGAGGCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371699.5
CDS CAA 72 bp CCTCCCGGGCCTCCCGGACCCCTCACCAGGGTGCTTTaGGCCTCTGAAGCCCCAGGAGAGGGCAGACTAAGC +
Preference number: 6 (lower is better)
Translates to: PPGPPGPLTRVL*ASEAPGEGRLS
Trigger: GCTTAGTCTGCCCTCTCCTGGGGCTTCAGAGGCCAAAAGCACCCTGGTGAGGGGTCCGGGAGGCCCGGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371699.5
CDS TCA 72 bp GGTAGGTGCTGCAGGCCCGGTGCCCGTCGCAGGTGGTaGGGAAGGGCTGGTACACACGCTGCACGAACGACT +
Preference number: 6 (lower is better)
Translates to: GRCCRPGARRRW*GRAGTHAARTT
Trigger: AGTCGTTCGTGCAGCGTGTGTACCAGCCCTTCCTCACCACCTGCGACGGGCACCGGGCCTGCAGCACCTACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
ENST00000490469.5
ENST00000492002.1
ENST00000492862.6
CDS GCA 72 bp CACACACCCTACGGCCGGGCCGGTAGGCGTGCTCTGTaGCGCCCACTGCCAACACCAGAAGCCACATCAGCA +
Preference number: 6 (lower is better)
Translates to: HTPYGRAGRRAL*RPLPTPEATSA
Trigger: TGCTGATGTGGCTTCTGGTGTTGGCAGTGGGCGGCACAGAGCACGCCTACCGGCCCGGCCGTAGGGTGTGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
ENST00000492862.6
CDS GCA 72 bp GAAATCTGCTCGCTCAGGGAGTCGATGCGGCCGAGCTaGTGGAAGGAGTGCACCAGGAGGCTGCCGGGGTCC +
Preference number: 6 (lower is better)
Translates to: EICSLRESMRPS*WKECTRRLPGS
Trigger: GGACCCCGGCAGCCTCCTGGTGCACTCCTTCCAGCAGCTCGGCCGCATCGACTCCCTGAGCGAGCAGATTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
CDS CCA 72 bp TTGCACTGTCCACTCCTGTCGGGTTGGGGGCCACCCTaGGGGGCCCTCCCTTGGGCACACAGAGTGTACCGT +
Preference number: 6 (lower is better)
Translates to: LHCPLLSGWGPP*GALPWAHRVYR
Trigger: ACGGTACACTCTGTGTGCCCAAGGGAGGGCCCCCCAGGGTGGCCCCCAACCCGACAGGAGTGGACAGTGCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000308874.12
ENST00000371698.3
ENST00000371699.5
ENST00000406555.7
ENST00000492002.1
CDS CCA 72 bp CCTCGGACGGGCTGGCTCTGTCAGCCACGGATGTGGTaGAACCTTCCCATCAGAGGACGTCCCGGACCCGAC +
Preference number: 6 (lower is better)
Translates to: PRTGWLCQPRMW*NLPIRGRPGPD
Trigger: GTCGGGTCCGGGACGTCCTCTGATGGGAAGGTTCCACCACATCCGTGGCTGACAGAGCCAGCCCGTCCGAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371699.5
CDS CCA 72 bp TGCCCACTGCTCCAGCTGATGGCGTGGAGGAGTCCATaGCCTTGTGGGCTGGCTTCTTGGCAGGTCCCCACC +
Preference number: 6 (lower is better)
Translates to: CPLLQLMAWRSP*PCGLASWQVPT
Trigger: GGTGGGGACCTGCCAAGAAGCCAGCCCACAAGGCCATGGACTCCTCCACGCCATCAGCTGGAGCAGTGGGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371699.5
CDS CCA 72 bp CCTTCCTGGGGCTGCCCACTGCTCCAGCTGATGGCGTaGAGGAGTCCATGGCCTTGTGGGCTGGCTTCTTGG +
Preference number: 6 (lower is better)
Translates to: PSWGCPLLQLMA*RSPWPCGLASW
Trigger: CCAAGAAGCCAGCCCACAAGGCCATGGACTCCTCCACGCCATCAGCTGGAGCAGTGGGCAGCCCCAGGAAGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371699.5
CDS TCA 72 bp GTAGCGCGAAGCCCCTCACAGCGGGCCCAGCCAAGCTaGACTTTGCTGCCAACCACAGGGGCTGCTCTGATG +
Preference number: 6 (lower is better)
Translates to: VARSPSQRAQPS*TLLPTTGAALM
Trigger: CATCAGAGCAGCCCCTGTGGTTGGCAGCAAAGTTCAGCTTGGCTGGGCCCGCTGTGAGGGGCTTCGCGCTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308874.12
ENST00000492862.6
CDS TCA 72 bp CCCCGTTGGGTTGCTCATCCACTGCTAGGGAGAAGATaGGGAGACCTCAGCCCTCGGGACACCGCAGGGCGT +
Preference number: 6 (lower is better)
Translates to: PRWVAHPLLGRR*GDLSPRDTAGR
Trigger: ACGCCCTGCGGTGTCCCGAGGGCTGAGGTCTCCTCATCTTCTCCCTAGCAGTGGATGAGCAACCCAACGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000308874.12
ENST00000492862.6
CDS CAA 72 bp ACTGCTCCAGCTGATGGCGTGGAGGAGTCCATGGCCTaGTGGGCTGGCTTCTTGGCAGGTCCCCACCGGCTT +
Preference number: 6 (lower is better)
Translates to: TAPADGVEESMA*WAGFLAGPHRL
Trigger: AAGCCGGTGGGGACCTGCCAAGAAGCCAGCCCACAAGGCCATGGACTCCTCCACGCCATCAGCTGGAGCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371699.5
CDS CCA 72 bp CCCGGTCCTGGGGGCCTGGATTCACACTGCTCATCCTaGCTACAGATGTGGCTTTGGGGTTCCTCTCCCTCG +
Preference number: 6 (lower is better)
Translates to: PGPGGLDSHCSS*LQMWLWGSSPS
Trigger: CGAGGGAGAGGAACCCCAAAGCCACATCTGTAGCCAGGATGAGCAGTGTGAATCCAGGCCCCCAGGACCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000492862.6
CDS CCA 72 bp GATTCACACTGCTCATCCTGGCTACAGATGTGGCTTTaGGGTTCCTCTCCCTCGGGGCCAGTTCCCCTCCCC +
Preference number: 6 (lower is better)
Translates to: DSHCSSWLQMWL*GSSPSGPVPLP
Trigger: GGGGAGGGGAACTGGCCCCGAGGGAGAGGAACCCCAAAGCCACATCTGTAGCCAGGATGAGCAGTGTGAATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000308874.12
ENST00000492862.6
CDS CCA 72 bp GGTCCTGGGGGCTGCCTGGATTCACACTGCTCATCCTaGCTACAGATGTGGCTTTGGGGTTCCTCTCCCTCG +
Preference number: 6 (lower is better)
Translates to: GPGGCLDSHCSS*LQMWLWGSSPS
Trigger: CGAGGGAGAGGAACCCCAAAGCCACATCTGTAGCCAGGATGAGCAGTGTGAATCCAGGCAGCCCCCAGGACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000308874.12
CDS CCA 72 bp GGCCTGGATTCACACTGCTCATCCTGGCTACAGATGTaGCTTTGGGGTTCCTCTCCCTCGGGGCCAGTTCCC +
Preference number: 6 (lower is better)
Translates to: GLDSHCSSWLQM*LWGSSPSGPVP
Trigger: GGGAACTGGCCCCGAGGGAGAGGAACCCCAAAGCCACATCTGTAGCCAGGATGAGCAGTGTGAATCCAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000492862.6
CDS CCA 72 bp TGCCTGGATTCACACTGCTCATCCTGGCTACAGATGTaGCTTTGGGGTTCCTCTCCCTCGGGGCCAGTTCCC +
Preference number: 6 (lower is better)
Translates to: CLDSHCSSWLQM*LWGSSPSGPVP
Trigger: GGGAACTGGCCCCGAGGGAGAGGAACCCCAAAGCCACATCTGTAGCCAGGATGAGCAGTGTGAATCCAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000308874.12
CDS CCA 72 bp GGCTTCCATTTTCAGAGGAGGCAGCTGGCTCACAGGTaGAAGCCGCTTGTTCAAGGGTGGAAAACGGAGGCC +
Preference number: 6 (lower is better)
Translates to: GFHFQRRQLAHR*KPLVQGWKTEA
Trigger: GGCCTCCGTTTTCCACCCTTGAACAAGCGGCTTCCACCTGTGAGCCAGCTGCCTCCTCTGAAAATGGAAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371699.5