RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EFTUD2 (Homo sapiens)

Ensembl gene IDs: ENSG00000108883

Ensembl transcript IDs: ENST00000402521.7, ENST00000426333.7, ENST00000585616.5, ENST00000585794.5, ENST00000586276.5, ENST00000586654.5, ENST00000587914.1, ENST00000587957.1, ENST00000588340.1, ENST00000588374.1, ENST00000589211.1, ENST00000589475.1, ENST00000589769.1, ENST00000589825.5, ENST00000590124.5, ENST00000590367.5, ENST00000590977.5, ENST00000591382.5, ENST00000591856.1, ENST00000592408.5, ENST00000592576.5, ENST00000592701.2, ENST00000593072.5, ENST00000593200.5

Found 829 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGGCCCTTCCTACGGCGGGTTTTGATCATGAATTCCCGGGCCAGGTaGGGAGCTGGCTGTGGCTCCAAGGGGCGGATGACAATGCTCTTG +
Preference number: 1 (lower is better)
Translates to: RPFLRRVLIMNSRAR*GAGCGSKGRMTMLL
Trigger: CAAGAGCATTGTCATCCGCCCCTTGGAGCCACAGCCAGCTCCTCACCTGGCCCGGGAATTCATGATCAAAACCCGCCGTAGGAAGGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589769.1
3UTR TCA 90 bp GTGGTCAGATGCTTGAAGCAGCTGTTGGGACCTGGGGCAGAAAGATaGGCGGGAAGCTGGACTCTCAAGGGAGCAGCTAGAGGTGAACCC +
Preference number: 1 (lower is better)
Translates to: VVRCLKQLLGPGAER*AGSWTLKGAARGEP
Trigger: GGGTTCACCTCTAGCTGCTCCCTTGAGAGTCCAGCTTCCCGCTCATCTTTCTGCCCCAGGTCCCAACAGCTGCTTCAAGCATCTGACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426333.7
3UTR CCA 90 bp ACCCAACAACTCCCAAGCCATCTTAGGTTCCACCCAGAAGCAGCATaGAGTGGGAGCAAGGGGGCAATAATGGGGCCTTGGCGCTCATGG +
Preference number: 1 (lower is better)
Translates to: TQQLPSHLRFHPEAA*SGSKGAIMGPWRSW
Trigger: CCATGAGCGCCAAGGCCCCATTATTGCCCCCTTGCTCCCACTCCATGCTGCTTCTGGGTGGAACCTAAGATGGCTTGGGAGTTGTTGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426333.7
3UTR CCA 90 bp TTCCCCAGGTTGTGTGGTCAGATGCTTGAAGCAGCTGTTGGGACCTaGGGCAGAAAGATGAGCGGGAAGCTGGACTCTCAAGGGAGCAGC +
Preference number: 1 (lower is better)
Translates to: FPRLCGQMLEAAVGT*GRKMSGKLDSQGSS
Trigger: GCTGCTCCCTTGAGAGTCCAGCTTCCCGCTCATCTTTCTGCCCCAGGTCCCAACAGCTGCTTCAAGCATCTGACCACACAACCTGGGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426333.7
3UTR CCA 90 bp AGGAAGCAGGAGGCCAAATGCTCCTCTCTCACTGGGGCTCTGGGTTaGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCAGAC +
Preference number: 1 (lower is better)
Translates to: RKQEAKCSSLTGALG*RLVSCSRWQQQLPD
Trigger: GTCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGAGCCCCAGTGAGAGAGGAGCATTTGGCCTCCTGCTTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
3UTR CCA 90 bp CAGAGGCCACAGAAGGAAGCAGGAGGCCAAATGCTCCTCTCTCACTaGGGCTCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACA +
Preference number: 1 (lower is better)
Translates to: QRPQKEAGGQMLLSH*GSGLEVGELFKMAT
Trigger: TGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGAGCCCCAGTGAGAGAGGAGCATTTGGCCTCCTGCTTCCTTCTGTGGCCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
3UTR CCA 90 bp ACACAGGTGCTGTGTACACAATGTACAGCGATTACGTCAAGAGGATaGCACAGGATGCTGGAGAGAAGTAGGACTCCTATAGGAGCCGGG +
Preference number: 1 (lower is better)
Translates to: TQVLCTQCTAITSRG*HRMLERSRTPIGAG
Trigger: CCCGGCTCCTATAGGAGTCCTACTTCTCTCCAGCATCCTGTGCCATCCTCTTGACGTAATCGCTGTACATTGTGTACACAGCACCTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426333.7
3UTR TCA 90 bp CAGCATCACCCCCTCAGCAGCATCAATGAAAAGGACCACTCCATCTaGGATGCGCAAGCCAGCTGTGACCTCATCAGAGAAATTCACATG +
Preference number: 1 (lower is better)
Translates to: QHHPLSSINEKDHSI*DAQASCDLIREIHM
Trigger: CATGTGAATTTCTCTGATGAGGTCACAGCTGGCTTGCGCATCTCAGATGGAGTGGTCCTTTTCATTGATGCTGCTGAGGGGGTGATGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000588374.1
3UTR GCA 90 bp AAGGGTTTGATGCCAAGGGGCATTATTTCTTTTCTCTCACACAGGTaGTGTGTACACAATGTACAGCGATTACGTCAAGAGGATGGCACA +
Preference number: 1 (lower is better)
Translates to: KGLMPRGIISFLSHR*CVHNVQRLRQEDGT
Trigger: TGTGCCATCCTCTTGACGTAATCGCTGTACATTGTGTACACAGCACCTGTGTGAGAGAAAAGAAATAATGCCCCTTGGCATCAAACCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426333.7
3UTR CCA 90 bp TGGAGTGTCCATGATATTGAAGAGATAAGATTTTCCTTTGGTGTCTaGCAAGACCACTGTCACAGGAGTGCTTTTGATGCCTACACCTCT +
Preference number: 1 (lower is better)
Translates to: WSVHDIEEIRFSFGV*QDHCHRSAFDAYTS
Trigger: AGAGGTGTAGGCATCAAAAGCACTCCTGTGACAGTGGTCTTGCCAGACACCAAAGGAAAATCTTATCTCTTCAATATCATGGACACTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588374.1
3UTR-3UTR GCA 90 bp GCATGGAGTGGGAGCAAGGGGGCAATAATGGGGCCTTGGCGCTCATGGGAACACAAGCAGGAGGCCAAATaGTCCTCTCTCACTGGGGCT +
Preference number: 2 (lower is better)
Translates to: AWSGSKGAIMGPWRSWEHKQEAK*SSLTGA
Trigger: AGCCCCAGTGAGAGAGGAGCATTTGGCCTCCTGCTT...GTGTTCCCATGAGCGCCAAGGCCCCATTATTGCCCCCTTGCTCCCACTCCATGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000426333.7
3UTR CAA 90 bp ACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTaGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGGAGTCCACGCAC +
Preference number: 2 (lower is better)
Translates to: TRRPRHMRSQLQVQE*QPTVGSRSSQESTH
Trigger: GTGCGTGGACTCCTGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
3UTR-3UTR CCA 90 bp CCTTCGTCAGGTGGATGCCAAGCTCGTCTAGGGTCCGTGGGAGGCTGGTGTCCACTGGGAGCTGCTAGTTaGGGCCTTTTTGGTGAACTT +
Preference number: 2 (lower is better)
Translates to: PSSGGCQARLGSVGGWCPLGAAS*GLFGEL
Trigger: AAGTTCACCAAAAAGGCCCCAACTAGCAGCTCCCAG...TGGACACCAGCCTCCCACGGACCCTAGACGAGCTTGGCATCCACCTGACGAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591856.1
3UTR-3UTR CCA 90 bp GGATCATCGAAGAATTTGCTGATGCTCACATCTTCACTGAGGCCCTTCCTACGGGGCCAGGTGAGGAGCTaGCTGTGGCTCCAAGGGGCG +
Preference number: 2 (lower is better)
Translates to: GSSKNLLMLTSSLRPFLRGQVRS*LWLQGA
Trigger: CGCCCCTTGGAGCCACAGCCAGCTCCTCACCTGGCC...CCGTAGGAAGGGCCTCAGTGAAGATGTGAGCATCAGCAAATTCTTCGATGATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589769.1
3UTR CAA 90 bp CAGGAGGCCAAATGCTCCTCTCTCACTGGGGCTCTGGGTTGGAGGTaGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACTCTC +
Preference number: 2 (lower is better)
Translates to: QEAKCSSLTGALGWR*VSCSRWQQQLPDTL
Trigger: GAGAGTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGAGCCCCAGTGAGAGAGGAGCATTTGGCCTCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
3UTR-3UTR CCA 90 bp TTCACTGGGGGAGAACAGAGTAAGGGACTGGTGGTAGCTGGGGAGAGGACTTGGTTCCTGAGGAGGTGGTaGGGTAGACTTCTGATCGCA +
Preference number: 2 (lower is better)
Translates to: FTGGEQSKGLVVAGERTWFLRRW*GRLLIA
Trigger: TGCGATCAGAAGTCTACCCCACCACCTCCTCAGGAA...CCAAGTCCTCTCCCCAGCTACCACCAGTCCCTTACTCTGTTCTCCCCCAGTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426333.7
3UTR CAA 90 bp CAAATGCTCCTCTCTCACTGGGGCTCTGGGTTGGAGGTTGGTGAGTaGTTCAAGATGGCAACAGCAGCTTCCAGACACTCTCTGACAACA +
Preference number: 2 (lower is better)
Translates to: QMLLSHWGSGLEVGE*FKMATAASRHSLTT
Trigger: TGTTGTCAGAGAGTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGAGCCCCAGTGAGAGAGGAGCATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
3UTR-3UTR TCA 90 bp AAGTGTTTCGTGAACTGTCAGATAAGTGGTTTCCCCAGGTTGTGTGGTCAGATGCCTGGGGCAGAAAGATaGGCGGGAAGCTGGACTCTC +
Preference number: 2 (lower is better)
Translates to: KCFVNCQISGFPRLCGQMPGAER*AGSWTL
Trigger: GAGAGTCCAGCTTCCCGCTCATCTTTCTGCCCCAGG...CATCTGACCACACAACCTGGGGAAACCACTTATCTGACAGTTCACGAAACACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426333.7
3UTR-3UTR TCA 90 bp AAAGGAGCAGAGCAAGACAGAGGTCAGAATGTTCTGTTCACTTGCAAACCATGGCTTCCAGACACTCTCTaGCAACACGAAGGCCACGTC +
Preference number: 2 (lower is better)
Translates to: KGAEQDRGQNVLFTCKPWLPDTL*QHEGHV
Trigger: GACGTGGCCTTCGTGTTGTCAGAGAGTGTCTGGAAG...CCATGGTTTGCAAGTGAACAGAACATTCTGACCTCTGTCTTGCTCTGCTCCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426333.7
ENST00000592576.5
3UTR-3UTR GCA 90 bp TTGGTGTCTGGCAAGACCACTGTCACAGGAGTGCTTTTGATGCCTACACCTCTCCCACAAAACATGTCTTaGCATGGTGGAGATGTCCAC +
Preference number: 2 (lower is better)
Translates to: LVSGKTTVTGVLLMPTPLPQNMS*HGGDVH
Trigger: GTGGACATCTCCACCATGGCAAGACATGTTTTGTGG...GAGAGGTGTAGGCATCAAAAGCACTCCTGTGACAGTGGTCTTGCCAGACACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588374.1
3UTR CAA 90 bp ACATCCTGTTTGGCAAGTTCCAGCAACATAGGATCATCGAAGAATTaGCTGATGCTCACATCTTCACTGAGGCCCTTCCTACGGCGGGTT +
Preference number: 2 (lower is better)
Translates to: TSCLASSSNIGSSKN*LMLTSSLRPFLRRV
Trigger: AACCCGCCGTAGGAAGGGCCTCAGTGAAGATGTGAGCATCAGCAAATTCTTCGATGATCCTATGTTGCTGGAACTTGCCAAACAGGATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589769.1
3UTR-3UTR GCA 90 bp GACAGAGGTCAGAATGTTCTGTTCACTTGCAAACCATGGCTAAGGTCAAACTTGAAGCAGGAGGCCAAATaGTCCTCTCTCACTGGGGCT +
Preference number: 2 (lower is better)
Translates to: DRGQNVLFTCKPWLRSNLKQEAK*SSLTGA
Trigger: AGCCCCAGTGAGAGAGGAGCATTTGGCCTCCTGCTT...CAAGTTTGACCTTAGCCATGGTTTGCAAGTGAACAGAACATTCTGACCTCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426333.7
ENST00000592576.5
3UTR-3UTR CCA 90 bp GTGAACTGTCAGATAAGTGGTTTCCCCAGGTTGTGTGGTCAGATGCTTGAAGCAAGAAGCAGCATGGAGTaGGAGCAAGGGGGCAATAAT +
Preference number: 2 (lower is better)
Translates to: VNCQISGFPRLCGQMLEARSSME*EQGGNN
Trigger: ATTATTGCCCCCTTGCTCCCACTCCATGCTGCTTCT...TGCTTCAAGCATCTGACCACACAACCTGGGGAAACCACTTATCTGACAGTTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426333.7
3UTR-3UTR CCA 90 bp CACAGGAGTGCTTTTGATGCCTACACCTCTCTCTTGCTCTGTGAAGAGGATGTCAAACATGTCTTGCCATaGTGGAGATGTCCACAAAGG +
Preference number: 2 (lower is better)
Translates to: HRSAFDAYTSLLLCEEDVKHVLP*WRCPQR
Trigger: CCTTTGTGGACATCTCCACCATGGCAAGACATGTTT...GACATCCTCTTCACAGAGCAAGAGAGAGGTGTAGGCATCAAAAGCACTCCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588374.1
3UTR CAA 90 bp TTCCTGATGTGTAACATGACAATAACCACCCCTGGCCTGCCTACCTaGCAGGCTGCTGTGAGGTTTCTCAGATACACAATACATGTGAAA +
Preference number: 2 (lower is better)
Translates to: FLMCNMTITTPGLPT*QAAVRFLRYTIHVK
Trigger: TTTCACATGTATTGTGTATCTGAGAAACCTCACAGCAGCCTGCAAGGTAGGCAGGCCAGGGGTGGTTATTGTCATGTTACACATCAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426333.7
3UTR-3UTR CCA 90 bp AAAGGAGCAGAGCAAGACAGAGGTCAGAATGTTCTGTTCACTTGCAAACCATGGGTGAGTTGTTCAAGATaGCAACAGCAGCTTCCAGAC +
Preference number: 2 (lower is better)
Translates to: KGAEQDRGQNVLFTCKPWVSCSR*QQQLPD
Trigger: GTCTGGAAGCTGCTGTTGCCATCTTGAACAACTCAC...CCATGGTTTGCAAGTGAACAGAACATTCTGACCTCTGTCTTGCTCTGCTCCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426333.7
ENST00000592576.5
3UTR-3UTR GCA 90 bp TTGGGAGATGACATATATTCAGAATGTAAGCACCAGACGGGGCAGGGGAGACGAAATGTTCTGTTCACTTaGAAACCATGGCTAAGGTCA +
Preference number: 2 (lower is better)
Translates to: LGDDIYSECKHQTGQGRRNVLFT*KPWLRS
Trigger: TGACCTTAGCCATGGTTTGCAAGTGAACAGAACATT...TCGTCTCCCCTGCCCCGTCTGGTGCTTACATTCTGAATATATGTCATCTCCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426333.7
3UTR-3UTR CCA 90 bp GTTCACTTGCAAACCATGGCTAAGGTCAAACTTGTAGAAAATAAAATTCCATGTACTGGGGCTCTGGGTTaGAGGTTGGTGAGTTGTTCA +
Preference number: 2 (lower is better)
Translates to: VHLQTMAKVKLVENKIPCTGALG*RLVSCS
Trigger: TGAACAACTCACCAACCTCCAACCCAGAGCCCCAGT...ACATGGAATTTTATTTTCTACAAGTTTGACCTTAGCCATGGTTTGCAAGTGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
3UTR-3UTR GCA 90 bp ATTGAAGAGATAAGATTTTCCTTTGGTGTCTGGCAAGACCACTGTCACAGGAGTGTAACAGGTAATGTCTaGTCCATCAGAGTGAATTTC +
Preference number: 2 (lower is better)
Translates to: IEEIRFSFGVWQDHCHRSVTGNV*SIRVNF
Trigger: GAAATTCACTCTGATGGAGCAGACATTACCTGTTAC...ACTCCTGTGACAGTGGTCTTGCCAGACACCAAAGGAAAATCTTATCTCTTCAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588374.1
3UTR CAA 90 bp GATGAAAGGAGCAGAGCAAGACAGAGGTCAGAATGTTCTGTTCACTaGCAAACCATGGCTAAGGTCAAACTTGTAGAAAATAAAATTCCA +
Preference number: 2 (lower is better)
Translates to: DERSRARQRSECSVH*QTMAKVKLVENKIP
Trigger: TGGAATTTTATTTTCTACAAGTTTGACCTTAGCCATGGTTTGCAAGTGAACAGAACATTCTGACCTCTGTCTTGCTCTGCTCCTTTCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426333.7
ENST00000592576.5
3UTR CCA 72 bp GGTGGATGCCAAGCTCGTCTAGGGTCCGTGGGAGGCTaGTGTCCACGTCACCTACAACCTGGGCGAGGATCT +
Preference number: 3 (lower is better)
Translates to: GGCQARLGSVGG*CPRHLQPGRGS
Trigger: AGATCCTCGCCCAGGTTGTAGGTGACGTGGACACCAGCCTCCCACGGACCCTAGACGAGCTTGGCATCCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591856.1
3UTR CCA 72 bp GGGCGGATGTTCAGCTTCAGCTCCTCCTTCGTCAGGTaGATGCCAAGCTCGTCTAGGGTCCGTGGGAGGCTG +
Preference number: 3 (lower is better)
Translates to: GRMFSFSSSFVR*MPSSSRVRGRL
Trigger: CAGCCTCCCACGGACCCTAGACGAGCTTGGCATCCACCTGACGAAGGAGGAGCTGAAGCTGAACATCCGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591856.1
3UTR GCA 72 bp GGATGTTCAGCTTCAGCTCCTCCTTCGTCAGGTGGATaGCAAGCTCGTCTAGGGTCCGTGGGAGGCTGGTGT +
Preference number: 3 (lower is better)
Translates to: GCSASAPPSSGG*QARLGSVGGWC
Trigger: ACACCAGCCTCCCACGGACCCTAGACGAGCTTGGCATCCACCTGACGAAGGAGGAGCTGAAGCTGAACATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591856.1
3UTR CCA 72 bp CTCCCAAGCCATCTTAGGTTCCACCCAGAAGCAGCATaGAGTGGGAGCAAGGGGGCAATAATGGGGCCTTGG +
Preference number: 3 (lower is better)
Translates to: LPSHLRFHPEAA*SGSKGAIMGPW
Trigger: CCAAGGCCCCATTATTGCCCCCTTGCTCCCACTCCATGCTGCTTCTGGGTGGAACCTAAGATGGCTTGGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426333.7
3UTR CCA 72 bp GGTTTTGATCATGAATTCCCGGGCCAGGTGAGGAGCTaGCTGTGGCTCCAAGGGGCGGATGACAATGCTCTT +
Preference number: 3 (lower is better)
Translates to: GFDHEFPGQVRS*LWLQGADDNAL
Trigger: AAGAGCATTGTCATCCGCCCCTTGGAGCCACAGCCAGCTCCTCACCTGGCCCGGGAATTCATGATCAAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589769.1
3UTR-3UTR CAA 90 bp ACGCCTGAGAGCCAGAGGACGGGTGAAGGGTTTGATGCCAAGGGGCATTATTTCCTTCAAGTACAGGAGTaGCAGCCCACTGTAGGGAGC +
Preference number: 3 (lower is better)
Translates to: TPESQRTGEGFDAKGHYFLQVQE*QPTVGS
Trigger: GCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAG...GAAATAATGCCCCTTGGCATCAAACCCTTCACCCGTCCTCTGGCTCTCAGGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426333.7
3UTR-3UTR CAA 90 bp ACCCAACAACTCCCAAGCCATCTTAGGTTCCACCCAGAAGCAGCATGGAGTGGGGCTCTGGGTTGGAGGTaGGTGAGTTGTTCAAGATGG +
Preference number: 3 (lower is better)
Translates to: TQQLPSHLRFHPEAAWSGALGWR*VSCSRW
Trigger: CCATCTTGAACAACTCACCAACCTCCAACCCAGAGC...CCCACTCCATGCTGCTTCTGGGTGGAACCTAAGATGGCTTGGGAGTTGTTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426333.7
3UTR TCA 72 bp CCCCTCAGCAGCATCAATGAAAAGGACCACTCCATCTaGGATGCGCAAGCCAGCTGTGACCTCATCAGAGAA +
Preference number: 3 (lower is better)
Translates to: PLSSINEKDHSI*DAQASCDLIRE
Trigger: TTCTCTGATGAGGTCACAGCTGGCTTGCGCATCTCAGATGGAGTGGTCCTTTTCATTGATGCTGCTGAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588374.1
3UTR GCA 72 bp GGGAGAGGACTTGGAGTAAATGGCTGGAAATCAAAGTaGTCTGGCCCCCTACTCCAGGGCAAGGAAGATTCT +
Preference number: 3 (lower is better)
Translates to: GRGLGVNGWKSK*SGPLLQGKEDS
Trigger: AGAATCTTCCTTGCCCTGGAGTAGGGGGCCAGAGCACTTTGATTTCCAGCCATTTACTCCAAGTCCTCTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426333.7
3UTR-3UTR CAA 90 bp GAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACTCTCTGACAACACGAAGGCTTCAAGTACAGGAGTaGCAGCCCACTGTAGGGAGC +
Preference number: 3 (lower is better)
Translates to: ELFKMATAASRHSLTTRRLQVQE*QPTVGS
Trigger: GCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAG...CCTTCGTGTTGTCAGAGAGTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
3UTR-3UTR CAA 90 bp GTGAACTGTCAGATAAGTGGTTTCCCCAGGTTGTGTGGTCAGATGCTTGAAGCAGCTCCTCTCTTTTCCTaGGGAATGGAGCCCGGCAGA +
Preference number: 3 (lower is better)
Translates to: VNCQISGFPRLCGQMLEAAPLFS*GMEPGR
Trigger: TCTGCCGGGCTCCATTCCCAAGGAAAAGAGAGGAGC...TGCTTCAAGCATCTGACCACACAACCTGGGGAAACCACTTATCTGACAGTTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426333.7
3UTR-3UTR CAA 90 bp GTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACTCTCTGACAACACTTCAAGTACAGGAGTaGCAGCCCACTGTAGGGAGC +
Preference number: 3 (lower is better)
Translates to: VGELFKMATAASRHSLTTLQVQE*QPTVGS
Trigger: GCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAG...TGTTGTCAGAGAGTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
3UTR-3UTR CAA 90 bp AGGTCAGAATGTTCTGTTCACTTGCAAACCATGGCTAAGGTCAAACTTGTAGAACACTGGGGCTCTGGGTaGGAGGTTGGTGAGTTGTTC +
Preference number: 3 (lower is better)
Translates to: RSECSVHLQTMAKVKLVEHWGSG*EVGELF
Trigger: GAACAACTCACCAACCTCCAACCCAGAGCCCCAGTG...TTCTACAAGTTTGACCTTAGCCATGGTTTGCAAGTGAACAGAACATTCTGACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426333.7
ENST00000592576.5
3UTR CCA 72 bp CTGTGTACACAATGTACAGCGATTACGTCAAGAGGATaGCACAGGATGCTGGAGAGAAGTAGGACTCCTATA +
Preference number: 3 (lower is better)
Translates to: LCTQCTAITSRG*HRMLERSRTPI
Trigger: TATAGGAGTCCTACTTCTCTCCAGCATCCTGTGCCATCCTCTTGACGTAATCGCTGTACATTGTGTACACAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426333.7
3UTR-3UTR CAA 90 bp CATGATATTGAAGAGATAAGATTTTCCTTTGGTGTCTGGCAAGACCACTGTCACGCCTACACCTCTCTCTaGCTCTGTGAAGAGGATGTC +
Preference number: 3 (lower is better)
Translates to: HDIEEIRFSFGVWQDHCHAYTSL*LCEEDV
Trigger: GACATCCTCTTCACAGAGCAAGAGAGAGGTGTAGGC...GTGACAGTGGTCTTGCCAGACACCAAAGGAAAATCTTATCTCTTCAATATCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588374.1
3UTR-3UTR CAA 90 bp GTTCACTTGCAAACCATGGCTAAGGTCAAACTTGTAGAAAATAAAATTCCATGTGCTCTGGGTTGGAGGTaGGTGAGTTGTTCAAGATGG +
Preference number: 3 (lower is better)
Translates to: VHLQTMAKVKLVENKIPCALGWR*VSCSRW
Trigger: CCATCTTGAACAACTCACCAACCTCCAACCCAGAGC...ACATGGAATTTTATTTTCTACAAGTTTGACCTTAGCCATGGTTTGCAAGTGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
3UTR TCA 72 bp TGTCAGTATAGCACAGATCTTGGTCATAGCGCTTTCTaGTTTCCGGGTGAGTCTGTTCAATTAAACAATCCA +
Preference number: 3 (lower is better)
Translates to: CQYSTDLGHSAF*FPGESVQLNNP
Trigger: TGGATTGTTTAATTGAACAGACTCACCCGGAAATCAGAAAGCGCTATGACCAAGATCTGTGCTATACTGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588374.1
CDS-3UTR CCA 90 bp CAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGGAGTCCACGCGGTGCAGGGGCTCCTaGGCAACCACCGCATCCAGG +
Preference number: 4 (lower is better)
Translates to: QVQELQPTVGSRSSQESTRCRGS*ATTASR
Trigger: CCTGGATGCGGTGGTTGCCCAGGAGCCCCTGCACCG...CGTGGACTCCTGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR GCA 90 bp CAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGGAGTCCACGGAGTTCCCAGGCCGCTaGCGGAGATCGTGCTTCCGC +
Preference number: 4 (lower is better)
Translates to: QVQELQPTVGSRSSQESTEFPGR*RRSCFR
Trigger: GCGGAAGCACGATCTCCGGCAGCGGCCTGGGAACTC...CGTGGACTCCTGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000592576.5
CDS-3UTR CCA 90 bp TCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGGAGTCCACCGGTGCAGGGGCTCCTaGGCAACCACCGCATCCAGG +
Preference number: 4 (lower is better)
Translates to: SSTGVAAHCREQELPGVHRCRGS*ATTASR
Trigger: CCTGGATGCGGTGGTTGCCCAGGAGCCCCTGCACCG...GTGGACTCCTGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp TCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGGAGTCCACGGCCAGGTGAGGAGCTaGCTGTGGCTCCAAGGGGCG +
Preference number: 4 (lower is better)
Translates to: SSTGVAAHCREQELPGVHGQVRS*LWLQGA
Trigger: CGCCCCTTGGAGCCACAGCCAGCTCCTCACCTGGCC...GTGGACTCCTGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp GTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGGGATGGGTGCATCCTaGGTCACGTGCCCCCTGCGC +
Preference number: 4 (lower is better)
Translates to: VSASSTGVAAHCREQELPGMGAS*VTCPLR
Trigger: GCGCAGGGGGCACGTGACTCAGGATGCACCCATCCC...TGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAGCTGAGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR GCA 90 bp GCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGGAGTCGAGTTCCCAGGCCGCTaGCGGAGATCGTGCTTCCGC +
Preference number: 4 (lower is better)
Translates to: ASSTGVAAHCREQELPGVEFPGR*RRSCFR
Trigger: GCGGAAGCACGATCTCCGGCAGCGGCCTGGGAACTC...GACTCCTGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000592576.5
CDS-3UTR GCA 90 bp TCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGGAGTCCACGAGTCACGTGCCCCCTaGGCCTGGCCAGGACGGTAT +
Preference number: 4 (lower is better)
Translates to: SSTGVAAHCREQELPGVHESRAP*AWPGRY
Trigger: ATACCGTCCTGGCCAGGCGCAGGGGGCACGTGACTC...GTGGACTCCTGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR GCA 90 bp CAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGGAGTCCACGGGAGCCTGGGATGGGTaGATCCTGAGTCACGTGCCC +
Preference number: 4 (lower is better)
Translates to: QVQELQPTVGSRSSQESTGAWDG*ILSHVP
Trigger: GGGCACGTGACTCAGGATGCACCCATCCCAGGCTCC...CGTGGACTCCTGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp GCATGGAGTGGGAGCAAGGGGGCAATAATGGGGCCTTGGCGCTCATGGGAACACGTGAGGAGCTGGCTGTaGCTCCAAGGGGCGGATGAC +
Preference number: 4 (lower is better)
Translates to: AWSGSKGAIMGPWRSWEHVRSWL*LQGADD
Trigger: GTCATCCGCCCCTTGGAGCCACAGCCAGCTCCTCAC...GTGTTCCCATGAGCGCCAAGGCCCCATTATTGCCCCCTTGCTCCCACTCCATGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000426333.7
CDS-3UTR TCA 90 bp CCTCCTTCGTCAGGTGGATGCCAAGCTCGTCTAGGGTCCGTGGGAGGCTGGTGTCAAAGGAGCCCAGCGTaGAGCAGATGCTGTACTGGG +
Preference number: 4 (lower is better)
Translates to: PPSSGGCQARLGSVGGWCQRSPA*SRCCTG
Trigger: CCCAGTACAGCATCTGCTTCACGCTGGGCTCCTTTG...ACACCAGCCTCCCACGGACCCTAGACGAGCTTGGCATCCACCTGACGAAGGAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591856.1
CDS-3UTR GCA 90 bp ACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACCGCTGCCGGAGATCGTaGTTCCGCCCCACGCCGAGG +
Preference number: 4 (lower is better)
Translates to: TKATSYEVSASSTGVAAHRCRRS*FRPTPR
Trigger: CCTCGGCGTGGGGCGGAAGCACGATCTCCGGCAGCG...GTGGGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402521.7
ENST00000426333.7
CDS-3UTR GCA 90 bp TTCACTGGGGGAGAACAGAGTAAGGGACTGGTGGTAGCTGGGGAGAGGACTTGGGAGTCACGTGCCCCCTaGGCCTGGCCAGGACGGTAT +
Preference number: 4 (lower is better)
Translates to: FTGGEQSKGLVVAGERTWESRAP*AWPGRY
Trigger: ATACCGTCCTGGCCAGGCGCAGGGGGCACGTGACTC...CCAAGTCCTCTCCCCAGCTACCACCAGTCCCTTACTCTGTTCTCCCCCAGTGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000426333.7
CDS-3UTR CCA 90 bp GCCCTTCCTACGGCGGGTTTTGATCATGAATTCCCGGGCCAGGTGAGGAGCTGGGAGGGGAGCCTGGGATaGGTGCATCCTGAGTCACGT +
Preference number: 4 (lower is better)
Translates to: ALPTAGFDHEFPGQVRSWEGSLG*VHPESR
Trigger: ACGTGACTCAGGATGCACCCATCCCAGGCTCCCCTC...CCAGCTCCTCACCTGGCCCGGGAATTCATGATCAAAACCCGCCGTAGGAAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589769.1
CDS-3UTR CCA 90 bp CAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGGAGTCCACGGAGGGGAGCCTGGGATaGGTGCATCCTGAGTCACGT +
Preference number: 4 (lower is better)
Translates to: QVQELQPTVGSRSSQESTEGSLG*VHPESR
Trigger: ACGTGACTCAGGATGCACCCATCCCAGGCTCCCCTC...CGTGGACTCCTGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp GCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGGAGTCGTGAGGAGCTGGCTGTaGCTCCAAGGGGCGGATGAC +
Preference number: 4 (lower is better)
Translates to: ASSTGVAAHCREQELPGVVRSWL*LQGADD
Trigger: GTCATCCGCCCCTTGGAGCCACAGCCAGCTCCTCAC...GACTCCTGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp CTCACTGGGGCTCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGGGCCAGGTGAGGAGCTaGCTGTGGCTCCAAGGGGCG +
Preference number: 4 (lower is better)
Translates to: LTGALGWRLVSCSRWQQQGQVRS*LWLQGA
Trigger: CGCCCCTTGGAGCCACAGCCAGCTCCTCACCTGGCC...CTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGAGCCCCAGTGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp CAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGGAGTCCACGCCTGCACCGCATGCTTaGTCAGCCGCTCTGTGTTCA +
Preference number: 4 (lower is better)
Translates to: QVQELQPTVGSRSSQESTPAPHA*SAALCS
Trigger: TGAACACAGAGCGGCTGATCAAGCATGCGGTGCAGG...CGTGGACTCCTGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp CAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGGAGTCCACGCAAAGGAGCCCAGCGTaGAGCAGATGCTGTACTGGG +
Preference number: 4 (lower is better)
Translates to: QVQELQPTVGSRSSQESTQRSPA*SRCCTG
Trigger: CCCAGTACAGCATCTGCTTCACGCTGGGCTCCTTTG...CGTGGACTCCTGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp TCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGGAGTCCACCATCTTGGGCAGCTCTaGGGGGTTGACTGGCTCCAC +
Preference number: 4 (lower is better)
Translates to: SSTGVAAHCREQELPGVHHLGQL*GVDWLH
Trigger: GTGGAGCCAGTCAACCCCTCAGAGCTGCCCAAGATG...GTGGACTCCTGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp ACTGGGGCTCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTGGGATGGGTGCATCCTaGGTCACGTGCCCCCTGCGC +
Preference number: 4 (lower is better)
Translates to: TGALGWRLVSCSRWQQQLGMGAS*VTCPLR
Trigger: GCGCAGGGGGCACGTGACTCAGGATGCACCCATCCC...AAGCTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGAGCCCCAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp TGGACTCTCAAGGGAGCAGCTAGAGGTGAACCCCTAGGACGCCTGAGAGCCAGAGCTCCAAGGGGCGGATaGCAATGCTCTTGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: WTLKGAARGEPLGRLRARAPRGG*QCSCPG
Trigger: CCCTGGACAAGAGCATTGTCATCCGCCCCTTGGAGC...TCTGGCTCTCAGGCGTCCTAGGGGTTCACCTCTAGCTGCTCCCTTGAGAGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426333.7
CDS-3UTR TCA 90 bp GCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGGAGTCTGCTCACATCTTCACTaGGGCCCTTCCTACGGCGGG +
Preference number: 4 (lower is better)
Translates to: ASSTGVAAHCREQELPGVCSHLH*GPSYGG
Trigger: CCCGCCGTAGGAAGGGCCTCAGTGAAGATGTGAGCA...GACTCCTGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR GCA 90 bp AACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCCGCTGCCGGAGATCGTaGTTCCGCCCCACGCCGAGG +
Preference number: 4 (lower is better)
Translates to: NTKATSYEVSASSTGVAARCRRS*FRPTPR
Trigger: CCTCGGCGTGGGGCGGAAGCACGATCTCCGGCAGCG...GGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402521.7
ENST00000426333.7
CDS-3UTR GCA 90 bp CAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGGAGTCCACGACTGCCAGCCTCTCCTaGACCGCATGCTTGATCAGC +
Preference number: 4 (lower is better)
Translates to: QVQELQPTVGSRSSQESTTASLS*TACLIS
Trigger: GCTGATCAAGCATGCGGTGCAGGAGAGGCTGGCAGT...CGTGGACTCCTGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR GCA 90 bp CAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGGAGTCCACGTGCAGAGACGCAATCTaGAGGGGCCTGGACCTCTAC +
Preference number: 4 (lower is better)
Translates to: QVQELQPTVGSRSSQESTCRDAI*RGLDLY
Trigger: GTAGAGGTCCAGGCCCCTGCAGATTGCGTCTCTGCA...CGTGGACTCCTGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR GCA 90 bp TTCACTGAGGCCCTTCCTACGGCGGGTTTTGATCATGAATTCCCGGGCCAGGTGGGAGCCTGGGATGGGTaGATCCTGAGTCACGTGCCC +
Preference number: 4 (lower is better)
Translates to: FTEALPTAGFDHEFPGQVGAWDG*ILSHVP
Trigger: GGGCACGTGACTCAGGATGCACCCATCCCAGGCTCC...CACCTGGCCCGGGAATTCATGATCAAAACCCGCCGTAGGAAGGGCCTCAGTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589769.1
CDS-3UTR CCA 90 bp TCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGGAGTCCACGGGTCCGTGGGAGGCTaGTGTCCACGTCACCTACAA +
Preference number: 4 (lower is better)
Translates to: SSTGVAAHCREQELPGVHGSVGG*CPRHLQ
Trigger: TTGTAGGTGACGTGGACACCAGCCTCCCACGGACCC...GTGGACTCCTGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp TCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGGAGTCCACAGAGGGGGCCCTCCCTaGTTCCCCACTGGAAACCTT +
Preference number: 4 (lower is better)
Translates to: SSTGVAAHCREQELPGVHRGGPP*FPTGNL
Trigger: AAGGTTTCCAGTGGGGAACCAGGGAGGGCCCCCTCT...GTGGACTCCTGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp TTCACTGAGGCCCTTCCTACGGCGGGTTTTGATCATGAATTCCCGGGCCAGGTGGTGAGGAGCTGGCTGTaGCTCCAAGGGGCGGATGAC +
Preference number: 4 (lower is better)
Translates to: FTEALPTAGFDHEFPGQVVRSWL*LQGADD
Trigger: GTCATCCGCCCCTTGGAGCCACAGCCAGCTCCTCAC...CACCTGGCCCGGGAATTCATGATCAAAACCCGCCGTAGGAAGGGCCTCAGTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589769.1
CDS-3UTR CCA 90 bp CATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGGGCCAGGTGAGGAGCTaGCTGTGGCTCCAAGGGGCG +
Preference number: 4 (lower is better)
Translates to: HMRSQLQVQELQPTVGSRGQVRS*LWLQGA
Trigger: CGCCCCTTGGAGCCACAGCCAGCTCCTCACCTGGCC...CCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp TCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGGAGTCCACGCAGCTCTGAGGGGTTaGCTGGCTCCACAGCAATCT +
Preference number: 4 (lower is better)
Translates to: SSTGVAAHCREQELPGVHAALRG*LAPQQS
Trigger: AGATTGCTGTGGAGCCAGTCAACCCCTCAGAGCTGC...GTGGACTCCTGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp GTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCACATCTTGGGCAGCTCTaGGGGGTTGACTGGCTCCAC +
Preference number: 4 (lower is better)
Translates to: VSASSTGVAAHCREQELPHLGQL*GVDWLH
Trigger: GTGGAGCCAGTCAACCCCTCAGAGCTGCCCAAGATG...TGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAGCTGAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp TCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGGAGTCCACGCTTGTCCCTGGGTGTaGGTCCGGAGATCAGTCTCA +
Preference number: 4 (lower is better)
Translates to: SSTGVAAHCREQELPGVHACPWV*VRRSVS
Trigger: TGAGACTGATCTCCGGACTCACACCCAGGGACAAGC...GTGGACTCCTGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp TTCACTGAGGCCCTTCCTACGGCGGGTTTTGATCATGAATTCCCGGGCCAGGTGGCTCCAAGGGGCGGATaGCAATGCTCTTGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: FTEALPTAGFDHEFPGQVAPRGG*QCSCPG
Trigger: CCCTGGACAAGAGCATTGTCATCCGCCCCTTGGAGC...CACCTGGCCCGGGAATTCATGATCAAAACCCGCCGTAGGAAGGGCCTCAGTGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589769.1
CDS-3UTR TCA 90 bp GCATGGAGTGGGAGCAAGGGGGCAATAATGGGGCCTTGGCGCTCATGGGAACACCTTCCAGACACTCTCTaGCAACACGAAGGCCACGTC +
Preference number: 4 (lower is better)
Translates to: AWSGSKGAIMGPWRSWEHLPDTL*QHEGHV
Trigger: GACGTGGCCTTCGTGTTGTCAGAGAGTGTCTGGAAG...GTGTTCCCATGAGCGCCAAGGCCCCATTATTGCCCCCTTGCTCCCACTCCATGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426333.7
CDS-3UTR GCA 90 bp GTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGTGCCCAGGATCACATaGTCGCCAGACTCCTCCACC +
Preference number: 4 (lower is better)
Translates to: VSASSTGVAAHCREQELPVPRIT*SPDSST
Trigger: GGTGGAGGAGTCTGGCGAGCATGTGATCCTGGGCAC...TGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAGCTGAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR GCA 90 bp ACTGGGGCTCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTGAGTCACGTGCCCCCTaGGCCTGGCCAGGACGGTAT +
Preference number: 4 (lower is better)
Translates to: TGALGWRLVSCSRWQQQLESRAP*AWPGRY
Trigger: ATACCGTCCTGGCCAGGCGCAGGGGGCACGTGACTC...AAGCTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGAGCCCCAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR GCA 90 bp TCCTCTCTCACTGGGGCTCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAAGAGTCACGTGCCCCCTaGGCCTGGCCAGGACGGTAT +
Preference number: 4 (lower is better)
Translates to: SSLTGALGWRLVSCSRWQESRAP*AWPGRY
Trigger: ATACCGTCCTGGCCAGGCGCAGGGGGCACGTGACTC...TTGCCATCTTGAACAACTCACCAACCTCCAACCCAGAGCCCCAGTGAGAGAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp AGCTTCAGCTCCTCCTTCGTCAGGTGGATGCCAAGCTCGTCTAGGGTCCGTGGGTCCTCCTTCGTCAGGTaGATGCCAAGCTCGTCTAGG +
Preference number: 4 (lower is better)
Translates to: SFSSSFVRWMPSSSRVRGSSFVR*MPSSSR
Trigger: CCTAGACGAGCTTGGCATCCACCTGACGAAGGAGGA...CCCACGGACCCTAGACGAGCTTGGCATCCACCTGACGAAGGAGGAGCTGAAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591856.1
CDS-3UTR CCA 90 bp AACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCCGGTGCAGGGGCTCCTaGGCAACCACCGCATCCAGG +
Preference number: 4 (lower is better)
Translates to: NTKATSYEVSASSTGVAARCRGS*ATTASR
Trigger: CCTGGATGCGGTGGTTGCCCAGGAGCCCCTGCACCG...GGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp CTGGTGGTAGCTGGGGAGAGGACTTGGAGTAAATGGCTGGAAATCAAAGTGCTCGGCCAGGTGAGGAGCTaGCTGTGGCTCCAAGGGGCG +
Preference number: 4 (lower is better)
Translates to: LVVAGERTWSKWLEIKVLGQVRS*LWLQGA
Trigger: CGCCCCTTGGAGCCACAGCCAGCTCCTCACCTGGCC...GAGCACTTTGATTTCCAGCCATTTACTCCAAGTCCTCTCCCCAGCTACCACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426333.7
CDS-3UTR TCA 90 bp TCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGGAGTCCACAAGGACCACTCCATCTaGGATGCGCAAGCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: SSTGVAAHCREQELPGVHKDHSI*DAQASC
Trigger: ACAGCTGGCTTGCGCATCTCAGATGGAGTGGTCCTT...GTGGACTCCTGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp GCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGGAGTCACCCGGCCAAAGGCGTaGAACTGGACTCCATCATCT +
Preference number: 4 (lower is better)
Translates to: ASSTGVAAHCREQELPGVTRPKA*NWTPSS
Trigger: AGATGATGGAGTCCAGTTTCACGCCTTTGGCCGGGT...GACTCCTGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp CTCACTGGGGCTCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCATCTTGGGCAGCTCTaGGGGGTTGACTGGCTCCAC +
Preference number: 4 (lower is better)
Translates to: LTGALGWRLVSCSRWQQQHLGQL*GVDWLH
Trigger: GTGGAGCCAGTCAACCCCTCAGAGCTGCCCAAGATG...CTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGAGCCCCAGTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp TCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGGAGTCCACCCGTCTCACAAAACGTaGCAACTGGGTCAGCCACCT +
Preference number: 4 (lower is better)
Translates to: SSTGVAAHCREQELPGVHPSHKT*QLGQPP
Trigger: AGGTGGCTGACCCAGTTGTCACGTTTTGTGAGACGG...GTGGACTCCTGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp ACAACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGGGGATGGGTGCATCCTaGGTCACGTGCCCCCTGCGC +
Preference number: 4 (lower is better)
Translates to: TTRRPRHMRSQLQVQELQGMGAS*VTCPLR
Trigger: GCGCAGGGGGCACGTGACTCAGGATGCACCCATCCC...CTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp CCAGGGGATCACCAGGCACAATCTGCCAGTGGTGGAAGACAGACAGAGAAAAGGTGCTCACATCTTCACTaGGGCCCTTCCTACGGCGGG +
Preference number: 4 (lower is better)
Translates to: PGDHQAQSASGGRQTEKRCSHLH*GPSYGG
Trigger: CCCGCCGTAGGAAGGGCCTCAGTGAAGATGTGAGCA...CCTTTTCTCTGTCTGTCTTCCACCACTGGCAGATTGTGCCTGGTGATCCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589769.1
CDS-3UTR TCA 90 bp GCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGGAGTCCTTCCAGACACTCTCTaGCAACACGAAGGCCACGTC +
Preference number: 4 (lower is better)
Translates to: ASSTGVAAHCREQELPGVLPDTL*QHEGHV
Trigger: GACGTGGCCTTCGTGTTGTCAGAGAGTGTCTGGAAG...GACTCCTGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR GCA 90 bp TCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGGAGTCCACAAAGGCGGCCCACGGTaGATATCTGGGAGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: SSTGVAAHCREQELPGVHKGGPR*ISGSLP
Trigger: AGGAAGACTCCCAGATATGCACCGTGGGCCGCCTTT...GTGGACTCCTGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR GCA 90 bp TCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGGAGTCCACTCTGAGCCTCCTCATTaGCTCGGGGTTCGGTTATGG +
Preference number: 4 (lower is better)
Translates to: SSTGVAAHCREQELPGVHSEPPH*LGVRLW
Trigger: CCATAACCGAACCCCGAGGCAATGAGGAGGCTCAGA...GTGGACTCCTGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR GCA 90 bp GTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCATGCAGAGACGCAATCTaGAGGGGCCTGGACCTCTAC +
Preference number: 4 (lower is better)
Translates to: VSASSTGVAAHCREQELPCRDAI*RGLDLY
Trigger: GTAGAGGTCCAGGCCCCTGCAGATTGCGTCTCTGCA...TGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAGCTGAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR GCA 90 bp GCATGGAGTGGGAGCAAGGGGGCAATAATGGGGCCTTGGCGCTCATGGGAACACGAGGATGGCACAGGATaGTGGAGAGAAGTAGGACTC +
Preference number: 4 (lower is better)
Translates to: AWSGSKGAIMGPWRSWEHEDGTG*WREVGL
Trigger: GAGTCCTACTTCTCTCCAGCATCCTGTGCCATCCTC...GTGTTCCCATGAGCGCCAAGGCCCCATTATTGCCCCCTTGCTCCCACTCCATGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426333.7
CDS-3UTR CCA 90 bp GCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGGAGTCCCCACGGTGCATATCTaGGAGTCTTCCTCATCCTCC +
Preference number: 4 (lower is better)
Translates to: ASSTGVAAHCREQELPGVPTVHI*ESSSSS
Trigger: GGAGGATGAGGAAGACTCCCAGATATGCACCGTGGG...GACTCCTGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp ACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACCGTGCCCCCTGCGCCTaGCCAGGACGGTATAAACTG +
Preference number: 4 (lower is better)
Translates to: TKATSYEVSASSTGVAAHRAPCA*PGRYKL
Trigger: CAGTTTATACCGTCCTGGCCAGGCGCAGGGGGCACG...GTGGGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp CCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGGTGAGGAGCTGGCTGTaGCTCCAAGGGGCGGATGAC +
Preference number: 4 (lower is better)
Translates to: PRHMRSQLQVQELQPTVGVRSWL*LQGADD
Trigger: GTCATCCGCCCCTTGGAGCCACAGCCAGCTCCTCAC...CCCTACAGTGGGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp TCCTCTCTCACTGGGGCTCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAAGTGAGGAGCTGGCTGTaGCTCCAAGGGGCGGATGAC +
Preference number: 4 (lower is better)
Translates to: SSLTGALGWRLVSCSRWQVRSWL*LQGADD
Trigger: GTCATCCGCCCCTTGGAGCCACAGCCAGCTCCTCAC...TTGCCATCTTGAACAACTCACCAACCTCCAACCCAGAGCCCCAGTGAGAGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp CTCACTGGGGCTCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGGCAGCTGTTGGGACCTaGGGCAGAAAGATGAGCGGG +
Preference number: 4 (lower is better)
Translates to: LTGALGWRLVSCSRWQQQAAVGT*GRKMSG
Trigger: CCCGCTCATCTTTCTGCCCCAGGTCCCAACAGCTGC...CTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGAGCCCCAGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426333.7
CDS-3UTR TCA 90 bp CCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGCATCTTGGGCAGCTCTaGGGGGTTGACTGGCTCCAC +
Preference number: 4 (lower is better)
Translates to: PRHMRSQLQVQELQPTVGHLGQL*GVDWLH
Trigger: GTGGAGCCAGTCAACCCCTCAGAGCTGCCCAAGATG...CCCTACAGTGGGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp ACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACGCTCCAAGGGGCGGATaGCAATGCTCTTGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: TKATSYEVSASSTGVAAHAPRGG*QCSCPG
Trigger: CCCTGGACAAGAGCATTGTCATCCGCCCCTTGGAGC...GTGGGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp CATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGTGCTCACATCTTCACTaGGGCCCTTCCTACGGCGGG +
Preference number: 4 (lower is better)
Translates to: HMRSQLQVQELQPTVGSRCSHLH*GPSYGG
Trigger: CCCGCCGTAGGAAGGGCCTCAGTGAAGATGTGAGCA...CCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp CCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGTGCTCACATCTTCACTaGGGCCCTTCCTACGGCGGG +
Preference number: 4 (lower is better)
Translates to: PRHMRSQLQVQELQPTVGCSHLH*GPSYGG
Trigger: CCCGCCGTAGGAAGGGCCTCAGTGAAGATGTGAGCA...CCCTACAGTGGGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp GGCTCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCAGATGCTCACATCTTCACTaGGGCCCTTCCTACGGCGGG +
Preference number: 4 (lower is better)
Translates to: GSGLEVGELFKMATAASRCSHLH*GPSYGG
Trigger: CCCGCCGTAGGAAGGGCCTCAGTGAAGATGTGAGCA...TCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp ACTGGGGCTCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCTGGGGCAGAAAGATaGGCGGGAAGCTGGACTCTC +
Preference number: 4 (lower is better)
Translates to: TGALGWRLVSCSRWQQQLPGAER*AGSWTL
Trigger: GAGAGTCCAGCTTCCCGCTCATCTTTCTGCCCCAGG...AAGCTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGAGCCCCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426333.7
CDS-3UTR GCA 90 bp CCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGGCCCAGCATGAATGGTaGCACTCAGCACCCGGCCAA +
Preference number: 4 (lower is better)
Translates to: PRHMRSQLQVQELQPTVGAQHEW*HSAPGQ
Trigger: TTGGCCGGGTGCTGAGTGGCACCATTCATGCTGGGC...CCCTACAGTGGGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR GCA 90 bp CATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGGCCCAGCATGAATGGTaGCACTCAGCACCCGGCCAA +
Preference number: 4 (lower is better)
Translates to: HMRSQLQVQELQPTVGSRAQHEW*HSAPGQ
Trigger: TTGGCCGGGTGCTGAGTGGCACCATTCATGCTGGGC...CCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR GCA 90 bp ACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACGTGCCCAGGATCACATaGTCGCCAGACTCCTCCACC +
Preference number: 4 (lower is better)
Translates to: TKATSYEVSASSTGVAAHVPRIT*SPDSST
Trigger: GGTGGAGGAGTCTGGCGAGCATGTGATCCTGGGCAC...GTGGGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR GCA 90 bp CATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGGGTAGAGCTCCCCAGTaGCCAGGATCACATGCTCGC +
Preference number: 4 (lower is better)
Translates to: HMRSQLQVQELQPTVGSRGRAPQ*PGSHAR
Trigger: GCGAGCATGTGATCCTGGGCACTGGGGAGCTCTACC...CCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR GCA 90 bp GGCTCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCAGAGGTAGAGCTCCCCAGTaGCCAGGATCACATGCTCGC +
Preference number: 4 (lower is better)
Translates to: GSGLEVGELFKMATAASRGRAPQ*PGSHAR
Trigger: GCGAGCATGTGATCCTGGGCACTGGGGAGCTCTACC...TCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR GCA 90 bp CTCACTGGGGCTCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCGAAATCGAGGTGTGTaGGTGTGTGCGCGCTTCGGA +
Preference number: 4 (lower is better)
Translates to: LTGALGWRLVSCSRWQQQRNRGV*VCARFG
Trigger: TCCGAAGCGCGCACACACGCACACACCTCGATTTCG...CTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGAGCCCCAGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591382.5
CDS-3UTR CCA 90 bp TGGACTCTCAAGGGAGCAGCTAGAGGTGAACCCCTAGGACGCCTGAGAGCCAGATGCTGTACTGGGAGCTaGAGAAGCAGACGTTACCCA +
Preference number: 4 (lower is better)
Translates to: WTLKGAARGEPLGRLRARCCTGS*RSRRYP
Trigger: TGGGTAACGTCTGCTTCTCCAGCTCCCAGTACAGCA...TCTGGCTCTCAGGCGTCCTAGGGGTTCACCTCTAGCTGCTCCCTTGAGAGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426333.7
CDS-3UTR CCA 90 bp CATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGGGGTCCGTGGGAGGCTaGTGTCCACGTCACCTACAA +
Preference number: 4 (lower is better)
Translates to: HMRSQLQVQELQPTVGSRGSVGG*CPRHLQ
Trigger: TTGTAGGTGACGTGGACACCAGCCTCCCACGGACCC...CCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp GGCTCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCAGAGGGTCCGTGGGAGGCTaGTGTCCACGTCACCTACAA +
Preference number: 4 (lower is better)
Translates to: GSGLEVGELFKMATAASRGSVGG*CPRHLQ
Trigger: TTGTAGGTGACGTGGACACCAGCCTCCCACGGACCC...TCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp GTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCATCCTCCTTCGTCAGGTaGATGCCAAGCTCGTCTAGG +
Preference number: 4 (lower is better)
Translates to: VSASSTGVAAHCREQELPSSFVR*MPSSSR
Trigger: CCTAGACGAGCTTGGCATCCACCTGACGAAGGAGGA...TGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAGCTGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp GTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCACTTGGCGCCCACCTTTaGAGAAGGGATATGCTGCAC +
Preference number: 4 (lower is better)
Translates to: VSASSTGVAAHCREQELPLGAHL*RRDMLH
Trigger: GTGCAGCATATCCCTTCTCCAAAGGTGGGCGCCAAG...TGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAGCTGAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp TCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACGCTGCCCAGCATGAATaGTGCCACTCAGCACCCGGC +
Preference number: 4 (lower is better)
Translates to: SGLEVGELFKMATAASRHAAQHE*CHSAPG
Trigger: GCCGGGTGCTGAGTGGCACCATTCATGCTGGGCAGC...GTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp CCAGGGGATCACCAGGCACAATCTGCCAGTGGTGGAAGACAGACAGAGAAAAGGGGCCAAAAGCCCAGATaGAACGGGCAGCCAGCAGAT +
Preference number: 4 (lower is better)
Translates to: PGDHQAQSASGGRQTEKRGQKPR*NGQPAD
Trigger: ATCTGCTGGCTGCCCGTTCCATCTGGGCTTTTGGCC...CCTTTTCTCTGTCTGTCTTCCACCACTGGCAGATTGTGCCTGGTGATCCCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000589769.1
CDS-3UTR CCA 90 bp ACATCTTCACTGAGGCCCTTCCTACGGCGGGTTTTGATCATGAATTCCCGGGCCCATCCACCAGAATGTTaGGGCCAGTCGCATCAGGGC +
Preference number: 4 (lower is better)
Translates to: TSSLRPFLRRVLIMNSRAHPPEC*GQSHQG
Trigger: GCCCTGATGCGACTGGCCCCAACATTCTGGTGGATG...GGCCCGGGAATTCATGATCAAAACCCGCCGTAGGAAGGGCCTCAGTGAAGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589769.1
CDS-3UTR CCA 90 bp CTCACTGGGGCTCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCATCCACCAGAATGTTaGGGCCAGTCGCATCAGGGC +
Preference number: 4 (lower is better)
Translates to: LTGALGWRLVSCSRWQQQHPPEC*GQSHQG
Trigger: GCCCTGATGCGACTGGCCCCAACATTCTGGTGGATG...CTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGAGCCCCAGTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp ACTGGGGCTCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTAGAGGGGGCCCTCCCTaGTTCCCCACTGGAAACCTT +
Preference number: 4 (lower is better)
Translates to: TGALGWRLVSCSRWQQQLRGGPP*FPTGNL
Trigger: AAGGTTTCCAGTGGGGAACCAGGGAGGGCCCCCTCT...AAGCTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGAGCCCCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp GTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACTCTCTGACAACACGGTGCAGGGGCTCCTaGGCAACCACCGCATCCAGG +
Preference number: 4 (lower is better)
Translates to: VGELFKMATAASRHSLTTRCRGS*ATTASR
Trigger: CCTGGATGCGGTGGTTGCCCAGGAGCCCCTGCACCG...TGTTGTCAGAGAGTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp GCATGGAGTGGGAGCAAGGGGGCAATAATGGGGCCTTGGCGCTCATGGGAACACGGCACAATCTGCCAGTaGTGGAAGACAGACAGAGAA +
Preference number: 4 (lower is better)
Translates to: AWSGSKGAIMGPWRSWEHGTICQ*WKTDRE
Trigger: TTCTCTGTCTGTCTTCCACCACTGGCAGATTGTGCC...GTGTTCCCATGAGCGCCAAGGCCCCATTATTGCCCCCTTGCTCCCACTCCATGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426333.7
CDS-3UTR CCA 90 bp GTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACTCTCTGACAACAGGCCAGGTGAGGAGCTaGCTGTGGCTCCAAGGGGCG +
Preference number: 4 (lower is better)
Translates to: VGELFKMATAASRHSLTTGQVRS*LWLQGA
Trigger: CGCCCCTTGGAGCCACAGCCAGCTCCTCACCTGGCC...TGTTGTCAGAGAGTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp GCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGGAGTCACTGGGGCTCTGGGTTaGAGGTTGGTGAGTTGTTCA +
Preference number: 4 (lower is better)
Translates to: ASSTGVAAHCREQELPGVTGALG*RLVSCS
Trigger: TGAACAACTCACCAACCTCCAACCCAGAGCCCCAGT...GACTCCTGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp CATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGGCGCTTCGGAAGCCTTaGGAAGGCACGAGGACGACA +
Preference number: 4 (lower is better)
Translates to: HMRSQLQVQELQPTVGSRALRKP*EGTRTT
Trigger: TGTCGTCCTCGTGCCTTCCCAAGGCTTCCGAAGCGC...CCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591382.5
3UTR CAA 72 bp CCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTaGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: PRHMRSQLQVQE*QPTVGSRSSQE
Trigger: CTCCTGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp GCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGGAGTCTGCGCAAGCCAGCTGTaGCCTCATCAGAGAAATTCA +
Preference number: 4 (lower is better)
Translates to: ASSTGVAAHCREQELPGVCASQL*PHQRNS
Trigger: TGAATTTCTCTGATGAGGTCACAGCTGGCTTGCGCA...GACTCCTGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp CTCACTGGGGCTCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGAAGGACCACTCCATCTaGGATGCGCAAGCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: LTGALGWRLVSCSRWQQQKDHSI*DAQASC
Trigger: ACAGCTGGCTTGCGCATCTCAGATGGAGTGGTCCTT...CTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGAGCCCCAGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp TCCTCTCTCACTGGGGCTCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACCTGCACCGCATGCTTaGTCAGCCGCTCTGTGTTCA +
Preference number: 4 (lower is better)
Translates to: SSLTGALGWRLVSCSRWQPAPHA*SAALCS
Trigger: TGAACACAGAGCGGCTGATCAAGCATGCGGTGCAGG...TTGCCATCTTGAACAACTCACCAACCTCCAACCCAGAGCCCCAGTGAGAGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp CCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGCAAAGGAGCCCAGCGTaGAGCAGATGCTGTACTGGG +
Preference number: 4 (lower is better)
Translates to: PRHMRSQLQVQELQPTVGQRSPA*SRCCTG
Trigger: CCCAGTACAGCATCTGCTTCACGCTGGGCTCCTTTG...CCCTACAGTGGGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp ACGCCTGAGAGCCAGAGGACGGGTGAAGGGTTTGATGCCAAGGGGCATTATTTCACCCGGCCAAAGGCGTaGAACTGGACTCCATCATCT +
Preference number: 4 (lower is better)
Translates to: TPESQRTGEGFDAKGHYFTRPKA*NWTPSS
Trigger: AGATGATGGAGTCCAGTTTCACGCCTTTGGCCGGGT...GAAATAATGCCCCTTGGCATCAAACCCTTCACCCGTCCTCTGGCTCTCAGGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426333.7
CDS-3UTR TCA 90 bp ACGCCTGAGAGCCAGAGGACGGGTGAAGGGTTTGATGCCAAGGGGCATTATTTCAAGGGTCGGAAAATCTaGGCCTCCTCATTGCCTCGG +
Preference number: 4 (lower is better)
Translates to: TPESQRTGEGFDAKGHYFKGRKI*ASSLPR
Trigger: CCGAGGCAATGAGGAGGCTCAGATTTTCCGACCCTT...GAAATAATGCCCCTTGGCATCAAACCCTTCACCCGTCCTCTGGCTCTCAGGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426333.7
CDS-3UTR TCA 90 bp CCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGGCAGCTCTGAGGGGTTaGCTGGCTCCACAGCAATCT +
Preference number: 4 (lower is better)
Translates to: PRHMRSQLQVQELQPTVGAALRG*LAPQQS
Trigger: AGATTGCTGTGGAGCCAGTCAACCCCTCAGAGCTGC...CCCTACAGTGGGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp CATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGGCAGCTCTGAGGGGTTaGCTGGCTCCACAGCAATCT +
Preference number: 4 (lower is better)
Translates to: HMRSQLQVQELQPTVGSRAALRG*LAPQQS
Trigger: AGATTGCTGTGGAGCCAGTCAACCCCTCAGAGCTGC...CCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp ACGCCTGAGAGCCAGAGGACGGGTGAAGGGTTTGATGCCAAGGGGCATTATTTCCCTCCACCTTGGTGGTaGGGGATGGATAGCTCTTGT +
Preference number: 4 (lower is better)
Translates to: TPESQRTGEGFDAKGHYFPPPWW*GMDSSC
Trigger: ACAAGAGCTATCCATCCCTCACCACCAAGGTGGAGG...GAAATAATGCCCCTTGGCATCAAACCCTTCACCCGTCCTCTGGCTCTCAGGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426333.7
CDS-3UTR TCA 90 bp CAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGGAGTCCACGTTTCAGCAAAGCACTTaGGGGAGGATGTTTCCACCA +
Preference number: 4 (lower is better)
Translates to: QVQELQPTVGSRSSQESTFQQST*GRMFPP
Trigger: TGGTGGAAACATCCTCCCTCAAGTGCTTTGCTGAAA...CGTGGACTCCTGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp GTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCACCCCACTGGAAACCTTaGACGATGCTGTCCTTCACT +
Preference number: 4 (lower is better)
Translates to: VSASSTGVAAHCREQELPPHWKP*TMLSFT
Trigger: AGTGAAGGACAGCATCGTTCAAGGTTTCCAGTGGGG...TGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAGCTGAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp CATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGGCTTGTCCCTGGGTGTaGGTCCGGAGATCAGTCTCA +
Preference number: 4 (lower is better)
Translates to: HMRSQLQVQELQPTVGSRACPWV*VRRSVS
Trigger: TGAGACTGATCTCCGGACTCACACCCAGGGACAAGC...CCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp ACTGGGGCTCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTGCTTGTCCCTGGGTGTaGGTCCGGAGATCAGTCTCA +
Preference number: 4 (lower is better)
Translates to: TGALGWRLVSCSRWQQQLACPWV*VRRSVS
Trigger: TGAGACTGATCTCCGGACTCACACCCAGGGACAAGC...AAGCTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGAGCCCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp AACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCGCTCCAAGGGGCGGATaGCAATGCTCTTGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: NTKATSYEVSASSTGVAAAPRGG*QCSCPG
Trigger: CCCTGGACAAGAGCATTGTCATCCGCCCCTTGGAGC...GGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp TGGGGCTCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCCAGGGGAGACGAGGATaGAAGGAGCAGAGCAAGACA +
Preference number: 4 (lower is better)
Translates to: WGSGLEVGELFKMATAASQGRRG*KEQSKT
Trigger: TGTCTTGCTCTGCTCCTTTCATCCTCGTCTCCCCTG...GGAAGCTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGAGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426333.7
ENST00000592576.5
CDS-3UTR TCA 90 bp ACCCAACAACTCCCAAGCCATCTTAGGTTCCACCCAGAAGCAGCATGGAGTGGGGGTGGGGTAGACTTCTaGTCGCAGGAACCCAACAAC +
Preference number: 4 (lower is better)
Translates to: TQQLPSHLRFHPEAAWSGGGVDF*SQEPNN
Trigger: GTTGTTGGGTTCCTGCGATCAGAAGTCTACCCCACC...CCCACTCCATGCTGCTTCTGGGTGGAACCTAAGATGGCTTGGGAGTTGTTGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426333.7
CDS-3UTR TCA 90 bp GGATCATCGAAGAATTTGCTGATGCTCACATCTTCACTGAGGCCCTTCCTACGGGGGATGGGTGCATCCTaGGTCACGTGCCCCCATGAG +
Preference number: 4 (lower is better)
Translates to: GSSKNLLMLTSSLRPFLRGMGAS*VTCPHE
Trigger: CTCATGGGGGCACGTGACTCAGGATGCACCCATCCC...CCGTAGGAAGGGCCTCAGTGAAGATGTGAGCATCAGCAAATTCTTCGATGATCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000589769.1
CDS-3UTR GCA 90 bp TCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGGAGTCCACTACTTCTTGTCCTCATaGAGCACCACCTCCATCCCA +
Preference number: 4 (lower is better)
Translates to: SSTGVAAHCREQELPGVHYFLSS*STTSIP
Trigger: TGGGATGGAGGTGGTGCTGCATGAGGACAAGAAGTA...GTGGACTCCTGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR GCA 90 bp GCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGGAGTCTACTTCTTGTCCTCATaGAGCACCACCTCCATCCCA +
Preference number: 4 (lower is better)
Translates to: ASSTGVAAHCREQELPGVYFLSS*STTSIP
Trigger: TGGGATGGAGGTGGTGCTGCATGAGGACAAGAAGTA...GACTCCTGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR GCA 90 bp ACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACCTCTCCTGCACCGCATaGTTGATCAGCCGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: TKATSYEVSASSTGVAAHLSCTA*LISRSV
Trigger: CACAGAGCGGCTGATCAAGCATGCGGTGCAGGAGAG...GTGGGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR GCA 90 bp CCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGCTCTCCTGCACCGCATaGTTGATCAGCCGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: PRHMRSQLQVQELQPTVGLSCTA*LISRSV
Trigger: CACAGAGCGGCTGATCAAGCATGCGGTGCAGGAGAG...CCCTACAGTGGGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR GCA 90 bp CATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGACTGCCAGCCTCTCCTaGACCGCATGCTTGATCAGC +
Preference number: 4 (lower is better)
Translates to: HMRSQLQVQELQPTVGSRTASLS*TACLIS
Trigger: GCTGATCAAGCATGCGGTGCAGGAGAGGCTGGCAGT...CCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR GCA 90 bp TCCTCTCTCACTGGGGCTCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAAACTGCCAGCCTCTCCTaGACCGCATGCTTGATCAGC +
Preference number: 4 (lower is better)
Translates to: SSLTGALGWRLVSCSRWQTASLS*TACLIS
Trigger: GCTGATCAAGCATGCGGTGCAGGAGAGGCTGGCAGT...TTGCCATCTTGAACAACTCACCAACCTCCAACCCAGAGCCCCAGTGAGAGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR GCA 90 bp ACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACCCTTCGTCAGGTGGATaGCAAGCTCGTCTAGGGTCC +
Preference number: 4 (lower is better)
Translates to: TKATSYEVSASSTGVAAHPSSGG*QARLGS
Trigger: GGACCCTAGACGAGCTTGGCATCCACCTGACGAAGG...GTGGGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR GCA 90 bp AACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCGCCCAGCATGAATGGTaGCACTCAGCACCCGGCCAA +
Preference number: 4 (lower is better)
Translates to: NTKATSYEVSASSTGVAAAQHEW*HSAPGQ
Trigger: TTGGCCGGGTGCTGAGTGGCACCATTCATGCTGGGC...GGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR GCA 90 bp ACCCAACAACTCCCAAGCCATCTTAGGTTCCACCCAGAAGCAGCATGGAGTGGGTCTGAGCCTCCTCATTaGCTCGGGGTTCGGTTATGG +
Preference number: 4 (lower is better)
Translates to: TQQLPSHLRFHPEAAWSGSEPPH*LGVRLW
Trigger: CCATAACCGAACCCCGAGGCAATGAGGAGGCTCAGA...CCCACTCCATGCTGCTTCTGGGTGGAACCTAAGATGGCTTGGGAGTTGTTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426333.7
CDS-3UTR GCA 90 bp TCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACGGTAGAGCTCCCCAGTaGCCAGGATCACATGCTCGC +
Preference number: 4 (lower is better)
Translates to: SGLEVGELFKMATAASRHGRAPQ*PGSHAR
Trigger: GCGAGCATGTGATCCTGGGCACTGGGGAGCTCTACC...GTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR GCA 90 bp TCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGGAGTCCACATTCTCTATGTCCTCTaGCAGGCCCTTCTCAAGAGG +
Preference number: 4 (lower is better)
Translates to: SSTGVAAHCREQELPGVHILYVL*QALLKR
Trigger: CCTCTTGAGAAGGGCCTGGCAGAGGACATAGAGAAT...GTGGACTCCTGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR GCA 90 bp CCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGTGCAGAGACGCAATCTaGAGGGGCCTGGACCTCTAC +
Preference number: 4 (lower is better)
Translates to: PRHMRSQLQVQELQPTVGCRDAI*RGLDLY
Trigger: GTAGAGGTCCAGGCCCCTGCAGATTGCGTCTCTGCA...CCCTACAGTGGGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR GCA 90 bp TCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGGAGTCCACCAGGACGGTATAAACTaGAGAGACGCAATCTGCAGG +
Preference number: 4 (lower is better)
Translates to: SSTGVAAHCREQELPGVHQDGIN*RDAICR
Trigger: CCTGCAGATTGCGTCTCTGCAGTTTATACCGTCCTG...GTGGACTCCTGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR GCA 90 bp GACAACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGGAGCCTGGGATGGGTaGATCCTGAGTCACGTGCCC +
Preference number: 4 (lower is better)
Translates to: DNTKATSYEVSASSTGVAGAWDG*ILSHVP
Trigger: GGGCACGTGACTCAGGATGCACCCATCCCAGGCTCC...TGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR GCA 90 bp CTCACTGGGGCTCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGAAGCAGGAGGCCAAATaGTCCTCTCTCACTGGGGCT +
Preference number: 4 (lower is better)
Translates to: LTGALGWRLVSCSRWQQQKQEAK*SSLTGA
Trigger: AGCCCCAGTGAGAGAGGAGCATTTGGCCTCCTGCTT...CTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGAGCCCCAGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR GCA 90 bp TGGGGCTCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCCGCTTCCCGCTACAATaGAGGAGCTCAGAGGACTTC +
Preference number: 4 (lower is better)
Translates to: WGSGLEVGELFKMATAASRFPLQ*RSSEDF
Trigger: GAAGTCCTCTGAGCTCCTGCATTGTAGCGGGAAGCG...GGAAGCTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGAGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591382.5
CDS-3UTR CCA 90 bp GTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCATGCTGTACTGGGAGCTaGAGAAGCAGACGTTACCCA +
Preference number: 4 (lower is better)
Translates to: VSASSTGVAAHCREQELPCCTGS*RSRRYP
Trigger: TGGGTAACGTCTGCTTCTCCAGCTCCCAGTACAGCA...TGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAGCTGAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp GGGCGGATGTTCAGCTTCAGCTCCTCCTTCGTCAGGTGGATGCCAAGCTCGTCTCTGGGAGCTGCTAGTTaGGGCCTTTTTGGTGAACTT +
Preference number: 4 (lower is better)
Translates to: GRMFSFSSSFVRWMPSSSLGAAS*GLFGEL
Trigger: AAGTTCACCAAAAAGGCCCCAACTAGCAGCTCCCAG...AGACGAGCTTGGCATCCACCTGACGAAGGAGGAGCTGAAGCTGAACATCCGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000591856.1
CDS-3UTR CCA 90 bp CTCTGGGAGCTGCTAGTTGGGGCCTTTTTGGTGAACTTTCGCCTAGCAAAGTGTGGGTCCGTGGGAGGCTaGTGTCCACGTCACCTACAA +
Preference number: 4 (lower is better)
Translates to: LWELLVGAFLVNFRLAKCGSVGG*CPRHLQ
Trigger: TTGTAGGTGACGTGGACACCAGCCTCCCACGGACCC...ACACTTTGCTAGGCGAAAGTTCACCAAAAAGGCCCCAACTAGCAGCTCCCAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591856.1
CDS-3UTR CCA 90 bp TGGGGCTCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCGCTCAATCTTGGGCTTaGCGCCCACCTTTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: WGSGLEVGELFKMATAASAQSWA*RPPLEK
Trigger: CTTCTCCAAAGGTGGGCGCCAAGCCCAAGATTGAGC...GGAAGCTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGAGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp TGGGGCTCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCAGGTGTGCTCAATCTTaGGCTTGGCGCCCACCTTTG +
Preference number: 4 (lower is better)
Translates to: WGSGLEVGELFKMATAASRCAQS*AWRPPL
Trigger: CAAAGGTGGGCGCCAAGCCCAAGATTGAGCACACCT...GGAAGCTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGAGCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp CTCACTGGGGCTCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGAGGTGTGCTCAATCTTaGGCTTGGCGCCCACCTTTG +
Preference number: 4 (lower is better)
Translates to: LTGALGWRLVSCSRWQQQRCAQS*AWRPPL
Trigger: CAAAGGTGGGCGCCAAGCCCAAGATTGAGCACACCT...CTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGAGCCCCAGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp CAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGGAGTCCACGCTTGGTGGTGAGGGATaGATAGCTCTTGTTGACCTT +
Preference number: 4 (lower is better)
Translates to: QVQELQPTVGSRSSQESTLGGEG*IALVDL
Trigger: AAGGTCAACAAGAGCTATCCATCCCTCACCACCAAG...CGTGGACTCCTGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp CAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGGAGTCCACGGATCCCAATCGTACTTaGTCTGGAAGAACTCTCCCA +
Preference number: 4 (lower is better)
Translates to: QVQELQPTVGSRSSQESTDPNRT*SGRTLP
Trigger: TGGGAGAGTTCTTCCAGACCAAGTACGATTGGGATC...CGTGGACTCCTGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp ACTGGGGCTCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTGGCCAAAAGCCCAGATaGAACGGGCAGCCAGCAGAT +
Preference number: 4 (lower is better)
Translates to: TGALGWRLVSCSRWQQQLGQKPR*NGQPAD
Trigger: ATCTGCTGGCTGCCCGTTCCATCTGGGCTTTTGGCC...AAGCTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGAGCCCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp TCCTCTCTCACTGGGGCTCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAAGGCCAAAAGCCCAGATaGAACGGGCAGCCAGCAGAT +
Preference number: 4 (lower is better)
Translates to: SSLTGALGWRLVSCSRWQGQKPR*NGQPAD
Trigger: ATCTGCTGGCTGCCCGTTCCATCTGGGCTTTTGGCC...TTGCCATCTTGAACAACTCACCAACCTCCAACCCAGAGCCCCAGTGAGAGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp CATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGCATCCACCAGAATGTTaGGGCCAGTCGCATCAGGGC +
Preference number: 4 (lower is better)
Translates to: HMRSQLQVQELQPTVGSRHPPEC*GQSHQG
Trigger: GCCCTGATGCGACTGGCCCCAACATTCTGGTGGATG...CCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp AACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCAGAGGGGGCCCTCCCTaGTTCCCCACTGGAAACCTT +
Preference number: 4 (lower is better)
Translates to: NTKATSYEVSASSTGVAARGGPP*FPTGNL
Trigger: AAGGTTTCCAGTGGGGAACCAGGGAGGGCCCCCTCT...GGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp GTGGTAGCTGGGGAGAGGACTTGGAGTAAATGGCTGGAAATCAAAGTGCTCTGGAGAGGGGGCCCTCCCTaGTTCCCCACTGGAAACCTT +
Preference number: 4 (lower is better)
Translates to: VVAGERTWSKWLEIKVLWRGGPP*FPTGNL
Trigger: AAGGTTTCCAGTGGGGAACCAGGGAGGGCCCCCTCT...CCAGAGCACTTTGATTTCCAGCCATTTACTCCAAGTCCTCTCCCCAGCTACCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000426333.7
CDS-3UTR CCA 90 bp TCGAAGAATTTGCTGATGCTCACATCTTCACTGAGGCCCTTCCTACGGCGGGTTAGAGGGGGCCCTCCCTaGTTCCCCACTGGAAACCTT +
Preference number: 4 (lower is better)
Translates to: SKNLLMLTSSLRPFLRRVRGGPP*FPTGNL
Trigger: AAGGTTTCCAGTGGGGAACCAGGGAGGGCCCCCTCT...AACCCGCCGTAGGAAGGGCCTCAGTGAAGATGTGAGCATCAGCAAATTCTTCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589769.1
CDS-3UTR CCA 90 bp CACTCACATGGGGTAATTGAGCACAACATCCTGTTTGGCAAGTTCCAGCAACATCGGTGCAGGGGCTCCTaGGCAACCACCGCATCCAGG +
Preference number: 4 (lower is better)
Translates to: HSHGVIEHNILFGKFQQHRCRGS*ATTASR
Trigger: CCTGGATGCGGTGGTTGCCCAGGAGCCCCTGCACCG...ATGTTGCTGGAACTTGCCAAACAGGATGTTGTGCTCAATTACCCCATGTGAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589769.1
CDS-3UTR CCA 90 bp GAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACTCTCTGACAACACGAAGGCGTGCCCCCTGCGCCTaGCCAGGACGGTATAAACTG +
Preference number: 4 (lower is better)
Translates to: ELFKMATAASRHSLTTRRRAPCA*PGRYKL
Trigger: CAGTTTATACCGTCCTGGCCAGGCGCAGGGGGCACG...CCTTCGTGTTGTCAGAGAGTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp TCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACGAGGGGAGCCTGGGATaGGTGCATCCTGAGTCACGT +
Preference number: 4 (lower is better)
Translates to: SGLEVGELFKMATAASRHEGSLG*VHPESR
Trigger: ACGTGACTCAGGATGCACCCATCCCAGGCTCCCCTC...GTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp GAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACTCTCTGACAACACGAAGGGTGAGGAGCTGGCTGTaGCTCCAAGGGGCGGATGAC +
Preference number: 4 (lower is better)
Translates to: ELFKMATAASRHSLTTRRVRSWL*LQGADD
Trigger: GTCATCCGCCCCTTGGAGCCACAGCCAGCTCCTCAC...CCTTCGTGTTGTCAGAGAGTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp ACCCAACAACTCCCAAGCCATCTTAGGTTCCACCCAGAAGCAGCATGGAGTGGGCTCCTCTCTTTTCCTTaGGAATGGAGCCCGGCAGAG +
Preference number: 4 (lower is better)
Translates to: TQQLPSHLRFHPEAAWSGLLSFP*EWSPAE
Trigger: CTCTGCCGGGCTCCATTCCCAAGGAAAAGAGAGGAG...CCCACTCCATGCTGCTTCTGGGTGGAACCTAAGATGGCTTGGGAGTTGTTGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426333.7
CDS-3UTR TCA 90 bp TCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGGAGTCCACCTCTCTCTTGCTCTGTaGAGAGGATGTCAGTATAGC +
Preference number: 4 (lower is better)
Translates to: SSTGVAAHCREQELPGVHLSLAL*RGCQYS
Trigger: GCTATACTGACATCCTCTTCACAGAGCAAGAGAGAG...GTGGACTCCTGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp AACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCCCTGCACCGCATGCTTaGTCAGCCGCTCTGTGTTCA +
Preference number: 4 (lower is better)
Translates to: NTKATSYEVSASSTGVAAPAPHA*SAALCS
Trigger: TGAACACAGAGCGGCTGATCAAGCATGCGGTGCAGG...GGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp ACTGGGGCTCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTTTTTGCAGACCAGCCTaGGCAAGGGGCGGATGTTCA +
Preference number: 4 (lower is better)
Translates to: TGALGWRLVSCSRWQQQLFCRPA*ARGGCS
Trigger: TGAACATCCGCCCCTTGCTCAGGCTGGTCTGCAAAA...AAGCTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGAGCCCCAGT
54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp AACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCGCAGCTCTGAGGGGTTaGCTGGCTCCACAGCAATCT +
Preference number: 4 (lower is better)
Translates to: NTKATSYEVSASSTGVAAAALRG*LAPQQS
Trigger: AGATTGCTGTGGAGCCAGTCAACCCCTCAGAGCTGC...GGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp CCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGCCTCCACCTTGGTGGTaGGGGATGGATAGCTCTTGT +
Preference number: 4 (lower is better)
Translates to: PRHMRSQLQVQELQPTVGPPPWW*GMDSSC
Trigger: ACAAGAGCTATCCATCCCTCACCACCAAGGTGGAGG...CCCTACAGTGGGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp CATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGCCGTCTCACAAAACGTaGCAACTGGGTCAGCCACCT +
Preference number: 4 (lower is better)
Translates to: HMRSQLQVQELQPTVGSRPSHKT*QLGQPP
Trigger: AGGTGGCTGACCCAGTTGTCACGTTTTGTGAGACGG...CCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp GCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGGAGTCCTCACATGGGGTAATTaGGCACAACATCCTGTTTGG +
Preference number: 4 (lower is better)
Translates to: ASSTGVAAHCREQELPGVLTWGN*AQHPVW
Trigger: CCAAACAGGATGTTGTGCTCAATTACCCCATGTGAG...GACTCCTGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp GTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGAAGGCCACGTCATATaGGGTCTCAGCTTCAAGTAC +
Preference number: 4 (lower is better)
Translates to: VSASSTGVAAHCREQELPEGHVI*GLSFKY
Trigger: GTACTTGAAGCTGAGACCTCATATGACGTGGCCTTC...TGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAGCTGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp CTCACTGGGGCTCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGATAAGTCGGTATCCATaGTGCTCTCGCCTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: LTGALGWRLVSCSRWQQQISRYP*CSRLLS
Trigger: GCTGAGCAGGCGAGAGCATCATGGATACCGACTTAT...CTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGAGCCCCAGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426333.7
ENST00000592576.5
CDS-3UTR TCA 90 bp GGGCGGATGTTCAGCTTCAGCTCCTCCTTCGTCAGGTGGATGCCAAGCTCGTCTCAGGTGGTTCATAGCTaGGAACTTCTAGCACTTTCC +
Preference number: 4 (lower is better)
Translates to: GRMFSFSSSFVRWMPSSSQVVHS*ELLALS
Trigger: GGAAAGTGCTAGAAGTTCTCAGCTATGAACCACCTG...AGACGAGCTTGGCATCCACCTGACGAAGGAGGAGCTGAAGCTGAACATCCGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591856.1
CDS-3UTR GCA 90 bp AAAGGAGCAGAGCAAGACAGAGGTCAGAATGTTCTGTTCACTTGCAAACCATGGGAGTTCCCAGGCCGCTaGCGGAGATCGTGCTTCCGC +
Preference number: 4 (lower is better)
Translates to: KGAEQDRGQNVLFTCKPWEFPGR*RRSCFR
Trigger: GCGGAAGCACGATCTCCGGCAGCGGCCTGGGAACTC...CCATGGTTTGCAAGTGAACAGAACATTCTGACCTCTGTCTTGCTCTGCTCCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426333.7
ENST00000592576.5
CDS-3UTR GCA 90 bp TCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACCCTTCGTCAGGTGGATaGCAAGCTCGTCTAGGGTCC +
Preference number: 4 (lower is better)
Translates to: SGLEVGELFKMATAASRHPSSGG*QARLGS
Trigger: GGACCCTAGACGAGCTTGGCATCCACCTGACGAAGG...GTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR GCA 90 bp GAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACTCTCTGACAACACGAAGGGCCCAGCATGAATGGTaGCACTCAGCACCCGGCCAA +
Preference number: 4 (lower is better)
Translates to: ELFKMATAASRHSLTTRRAQHEW*HSAPGQ
Trigger: TTGGCCGGGTGCTGAGTGGCACCATTCATGCTGGGC...CCTTCGTGTTGTCAGAGAGTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR GCA 90 bp CAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGGAGTCCACGGGGTTCGGTTATGGTTaGTGTCTTCACAATTGGTTG +
Preference number: 4 (lower is better)
Translates to: QVQELQPTVGSRSSQESTGFGYG*CLHNWL
Trigger: CAACCAATTGTGAAGACAGCAACCATAACCGAACCC...CGTGGACTCCTGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR GCA 90 bp GACAACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGTGCCCAGGATCACATaGTCGCCAGACTCCTCCACC +
Preference number: 4 (lower is better)
Translates to: DNTKATSYEVSASSTGVAVPRIT*SPDSST
Trigger: GGTGGAGGAGTCTGGCGAGCATGTGATCCTGGGCAC...TGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR GCA 90 bp TTGGGAGATGACATATATTCAGAATGTAAGCACCAGACGGGGCAGGGGAGACGAGTGCCCAGGATCACATaGTCGCCAGACTCCTCCACC +
Preference number: 4 (lower is better)
Translates to: LGDDIYSECKHQTGQGRRVPRIT*SPDSST
Trigger: GGTGGAGGAGTCTGGCGAGCATGTGATCCTGGGCAC...TCGTCTCCCCTGCCCCGTCTGGTGCTTACATTCTGAATATATGTCATCTCCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426333.7
CDS-3UTR GCA 90 bp TCTGACAACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGGAGCCTGGGATGGGTaGATCCTGAGTCACGTGCCC +
Preference number: 4 (lower is better)
Translates to: SDNTKATSYEVSASSTGVGAWDG*ILSHVP
Trigger: GGGCACGTGACTCAGGATGCACCCATCCCAGGCTCC...AACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTTGTCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR GCA 90 bp GTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACTCTCTGACAACAGGAGCCTGGGATGGGTaGATCCTGAGTCACGTGCCC +
Preference number: 4 (lower is better)
Translates to: VGELFKMATAASRHSLTTGAWDG*ILSHVP
Trigger: GGGCACGTGACTCAGGATGCACCCATCCCAGGCTCC...TGTTGTCAGAGAGTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR GCA 90 bp CCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGAAGCAGGAGGCCAAATaGTCCTCTCTCACTGGGGCT +
Preference number: 4 (lower is better)
Translates to: PRHMRSQLQVQELQPTVGKQEAK*SSLTGA
Trigger: AGCCCCAGTGAGAGAGGAGCATTTGGCCTCCTGCTT...CCCTACAGTGGGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR GCA 90 bp GTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGCCTACCTTGCAGGCTaGTGTGAGGTTTCTCAGATA +
Preference number: 4 (lower is better)
Translates to: VSASSTGVAAHCREQELPAYLAG*CEVSQI
Trigger: TATCTGAGAAACCTCACAGCAGCCTGCAAGGTAGGC...TGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAGCTGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426333.7
CDS-3UTR CCA 90 bp TCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGGAGTCCACCTTCCTCTTGAACTATaGTCTCCACCTCAGGACCAT +
Preference number: 4 (lower is better)
Translates to: SSTGVAAHCREQELPGVHLPLEL*SPPQDH
Trigger: ATGGTCCTGAGGTGGAGACCATAGTTCAAGAGGAAG...GTGGACTCCTGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp TCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGGAGTCCACTTTTCCTTTGGTGTCTaGCAAGACCACTGTCACAGG +
Preference number: 4 (lower is better)
Translates to: SSTGVAAHCREQELPGVHFSFGV*QDHCHR
Trigger: CCTGTGACAGTGGTCTTGCCAGACACCAAAGGAAAA...GTGGACTCCTGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp TCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGGAGTCCACGTAATAAGCATCAGTTaGAGGCAGCTTCAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: SSTGVAAHCREQELPGVHVISIS*RQLQLQ
Trigger: CTGGAGCTGAAGCTGCCTCCAACTGATGCTTATTAC...GTGGACTCCTGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp GCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGGAGTCGTAATAAGCATCAGTTaGAGGCAGCTTCAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: ASSTGVAAHCREQELPGVVISIS*RQLQLQ
Trigger: CTGGAGCTGAAGCTGCCTCCAACTGATGCTTATTAC...GACTCCTGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp GTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCACTGGGAGCTGCTAGTTaGGGCCTTTTTGGTGAACTT +
Preference number: 4 (lower is better)
Translates to: VSASSTGVAAHCREQELPLGAAS*GLFGEL
Trigger: AAGTTCACCAAAAAGGCCCCAACTAGCAGCTCCCAG...TGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAGCTGAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp AGGTGGTGGGGTAGACTTCTGATCGCAGGAACCCAACAACTCCCAAGCCATCTTTCCTCCTTCGTCAGGTaGATGCCAAGCTCGTCTAGG +
Preference number: 4 (lower is better)
Translates to: RWWGRLLIAGTQQLPSHLSSFVR*MPSSSR
Trigger: CCTAGACGAGCTTGGCATCCACCTGACGAAGGAGGA...AAGATGGCTTGGGAGTTGTTGGGTTCCTGCGATCAGAAGTCTACCCCACCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426333.7
CDS-3UTR CCA 90 bp GGCTCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCAGATCCTCCTTCGTCAGGTaGATGCCAAGCTCGTCTAGG +
Preference number: 4 (lower is better)
Translates to: GSGLEVGELFKMATAASRSSFVR*MPSSSR
Trigger: CCTAGACGAGCTTGGCATCCACCTGACGAAGGAGGA...TCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp ACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACGCTCAATCTTGGGCTTaGCGCCCACCTTTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: TKATSYEVSASSTGVAAHAQSWA*RPPLEK
Trigger: CTTCTCCAAAGGTGGGCGCCAAGCCCAAGATTGAGC...GTGGGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp CATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGGTGTGCTCAATCTTaGGCTTGGCGCCCACCTTTG +
Preference number: 4 (lower is better)
Translates to: HMRSQLQVQELQPTVGSRRCAQS*AWRPPL
Trigger: CAAAGGTGGGCGCCAAGCCCAAGATTGAGCACACCT...CCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp GTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACTCTCTGACAACAGCTGCCCAGCATGAATaGTGCCACTCAGCACCCGGC +
Preference number: 4 (lower is better)
Translates to: VGELFKMATAASRHSLTTAAQHE*CHSAPG
Trigger: GCCGGGTGCTGAGTGGCACCATTCATGCTGGGCAGC...TGTTGTCAGAGAGTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp ACTGGGGCTCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCGGTTCACCTCGATGTaGTACCTGGCCACAGAGATC +
Preference number: 4 (lower is better)
Translates to: TGALGWRLVSCSRWQQQLRFTSM*YLATEI
Trigger: GATCTCTGTGGCCAGGTACCACATCGAGGTGAACCG...AAGCTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGAGCCCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp TGGACTCTCAAGGGAGCAGCTAGAGGTGAACCCCTAGGACGCCTGAGAGCCAGACTCGGGGTTCGGTTATaGTTGCTGTCTTCACAATTG +
Preference number: 4 (lower is better)
Translates to: WTLKGAARGEPLGRLRARLGVRL*LLSSQL
Trigger: CAATTGTGAAGACAGCAACCATAACCGAACCCCGAG...TCTGGCTCTCAGGCGTCCTAGGGGTTCACCTCTAGCTGCTCCCTTGAGAGTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426333.7
CDS-3UTR CCA 90 bp GCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGGAGTCGATCCCAATCGTACTTaGTCTGGAAGAACTCTCCCA +
Preference number: 4 (lower is better)
Translates to: ASSTGVAAHCREQELPGVDPNRT*SGRTLP
Trigger: TGGGAGAGTTCTTCCAGACCAAGTACGATTGGGATC...GACTCCTGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp TCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACGGCCAAAAGCCCAGATaGAACGGGCAGCCAGCAGAT +
Preference number: 4 (lower is better)
Translates to: SGLEVGELFKMATAASRHGQKPR*NGQPAD
Trigger: ATCTGCTGGCTGCCCGTTCCATCTGGGCTTTTGGCC...GTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp AACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCGGCCAAAAGCCCAGATaGAACGGGCAGCCAGCAGAT +
Preference number: 4 (lower is better)
Translates to: NTKATSYEVSASSTGVAAGQKPR*NGQPAD
Trigger: ATCTGCTGGCTGCCCGTTCCATCTGGGCTTTTGGCC...GGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp GACAACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGAGGGGAGCCTGGGATaGGTGCATCCTGAGTCACGT +
Preference number: 4 (lower is better)
Translates to: DNTKATSYEVSASSTGVAEGSLG*VHPESR
Trigger: ACGTGACTCAGGATGCACCCATCCCAGGCTCCCCTC...TGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp GAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACTCTCTGACAACACGAAGGGAGGGGAGCCTGGGATaGGTGCATCCTGAGTCACGT +
Preference number: 4 (lower is better)
Translates to: ELFKMATAASRHSLTTRREGSLG*VHPESR
Trigger: ACGTGACTCAGGATGCACCCATCCCAGGCTCCCCTC...CCTTCGTGTTGTCAGAGAGTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp GTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGGCACAATCTGCCAGTaGTGGAAGACAGACAGAGAA +
Preference number: 4 (lower is better)
Translates to: VSASSTGVAAHCREQELPGTICQ*WKTDRE
Trigger: TTCTCTGTCTGTCTTCCACCACTGGCAGATTGTGCC...TGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAGCTGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp GCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGGAGTCGTGAGTTGTTCAAGATaGCAACAGCAGCTTCCAGAC +
Preference number: 4 (lower is better)
Translates to: ASSTGVAAHCREQELPGVVSCSR*QQQLPD
Trigger: GTCTGGAAGCTGCTGTTGCCATCTTGAACAACTCAC...GACTCCTGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp ACTGGGGCTCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCTCCTCTCTTTTCCTTaGGAATGGAGCCCGGCAGAG +
Preference number: 4 (lower is better)
Translates to: TGALGWRLVSCSRWQQQLLLSFP*EWSPAE
Trigger: CTCTGCCGGGCTCCATTCCCAAGGAAAAGAGAGGAG...AAGCTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGAGCCCCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp TTCACTGGGGGAGAACAGAGTAAGGGACTGGTGGTAGCTGGGGAGAGGACTTGGAGAAGCAGCATGGAGTaGGAGCAAGGGGGCAATAAT +
Preference number: 4 (lower is better)
Translates to: FTGGEQSKGLVVAGERTWRSSME*EQGGNN
Trigger: ATTATTGCCCCCTTGCTCCCACTCCATGCTGCTTCT...CCAAGTCCTCTCCCCAGCTACCACCAGTCCCTTACTCTGTTCTCCCCCAGTGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000426333.7
CDS-3UTR CCA 90 bp ACGCCTGAGAGCCAGAGGACGGGTGAAGGGTTTGATGCCAAGGGGCATTATTTCGAAATCAAAGTGCTCTaGCCCCCTACTCCAGGGCAA +
Preference number: 4 (lower is better)
Translates to: TPESQRTGEGFDAKGHYFEIKVL*PPTPGQ
Trigger: TTGCCCTGGAGTAGGGGGCCAGAGCACTTTGATTTC...GAAATAATGCCCCTTGGCATCAAACCCTTCACCCGTCCTCTGGCTCTCAGGCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426333.7
3UTR CAA 72 bp CTCTCTCACTGGGGCTCTGGGTTGGAGGTTGGTGAGTaGTTCAAGATGGCAACAGCAGCTTCCAGACACTCT +
Preference number: 4 (lower is better)
Translates to: LSHWGSGLEVGE*FKMATAASRHS
Trigger: AGAGTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGAGCCCCAGTGAGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp TTCACTGGGGGAGAACAGAGTAAGGGACTGGTGGTAGCTGGGGAGAGGACTTGGCTCTCTCTTGCTCTGTaGAGAGGATGTCAGTATAGC +
Preference number: 4 (lower is better)
Translates to: FTGGEQSKGLVVAGERTWLSLAL*RGCQYS
Trigger: GCTATACTGACATCCTCTTCACAGAGCAAGAGAGAG...CCAAGTCCTCTCCCCAGCTACCACCAGTCCCTTACTCTGTTCTCCCCCAGTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426333.7
CDS-3UTR TCA 90 bp ACCCAACAACTCCCAAGCCATCTTAGGTTCCACCCAGAAGCAGCATGGAGTGGGTGCGCAAGCCAGCTGTaGCCTCATCAGAGAAATTCA +
Preference number: 4 (lower is better)
Translates to: TQQLPSHLRFHPEAAWSGCASQL*PHQRNS
Trigger: TGAATTTCTCTGATGAGGTCACAGCTGGCTTGCGCA...CCCACTCCATGCTGCTTCTGGGTGGAACCTAAGATGGCTTGGGAGTTGTTGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426333.7
CDS-3UTR TCA 90 bp TCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACAAGGACCACTCCATCTaGGATGCGCAAGCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: SGLEVGELFKMATAASRHKDHSI*DAQASC
Trigger: ACAGCTGGCTTGCGCATCTCAGATGGAGTGGTCCTT...GTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp GACAACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCACCTGCACCGCATGCTTaGTCAGCCGCTCTGTGTTCA +
Preference number: 4 (lower is better)
Translates to: DNTKATSYEVSASSTGVAPAPHA*SAALCS
Trigger: TGAACACAGAGCGGCTGATCAAGCATGCGGTGCAGG...TGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTTGTC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp CAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGGAGTCCACGTGCTTATTAATCCATTaGCCTCATCCACAATGTGGC +
Preference number: 4 (lower is better)
Translates to: QVQELQPTVGSRSSQESTCLLIH*PHPQCG
Trigger: GCCACATTGTGGATGAGGTCAATGGATTAATAAGCA...CGTGGACTCCTGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp GAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACTCTCTGACAACACGAAGGCAAAGGAGCCCAGCGTaGAGCAGATGCTGTACTGGG +
Preference number: 4 (lower is better)
Translates to: ELFKMATAASRHSLTTRRQRSPA*SRCCTG
Trigger: CCCAGTACAGCATCTGCTTCACGCTGGGCTCCTTTG...CCTTCGTGTTGTCAGAGAGTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp TCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACTTTTGCAGACCAGCCTaGGCAAGGGGCGGATGTTCA +
Preference number: 4 (lower is better)
Translates to: SGLEVGELFKMATAASRHFCRPA*ARGGCS
Trigger: TGAACATCCGCCCCTTGCTCAGGCTGGTCTGCAAAA...GTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp TGGGGCTCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCATGGATAGCTCTTGTTaGCCTTGCGCAGGCCATCAA +
Preference number: 4 (lower is better)
Translates to: WGSGLEVGELFKMATAASMDSSC*PCAGHQ
Trigger: TTGATGGCCTGCGCAAGGTCAACAAGAGCTATCCAT...GGAAGCTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGAGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp CATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGCCCCACTGGAAACCTTaGACGATGCTGTCCTTCACT +
Preference number: 4 (lower is better)
Translates to: HMRSQLQVQELQPTVGSRPHWKP*TMLSFT
Trigger: AGTGAAGGACAGCATCGTTCAAGGTTTCCAGTGGGG...CCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp TCTGACAACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCTCCAAGGGGCGGATaGCAATGCTCTTGTCCAGGG +
Preference number: 4 (lower is better)
Translates to: SDNTKATSYEVSASSTGVAPRGG*QCSCPG
Trigger: CCCTGGACAAGAGCATTGTCATCCGCCCCTTGGAGC...AACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTTGTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp GTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACTCTCTGACAACATGCTCACATCTTCACTaGGGCCCTTCCTACGGCGGG +
Preference number: 4 (lower is better)
Translates to: VGELFKMATAASRHSLTTCSHLH*GPSYGG
Trigger: CCCGCCGTAGGAAGGGCCTCAGTGAAGATGTGAGCA...TGTTGTCAGAGAGTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp AACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCCTTCCAGACACTCTCTaGCAACACGAAGGCCACGTC +
Preference number: 4 (lower is better)
Translates to: NTKATSYEVSASSTGVAALPDTL*QHEGHV
Trigger: GACGTGGCCTTCGTGTTGTCAGAGAGTGTCTGGAAG...GGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp CTGGTGGTAGCTGGGGAGAGGACTTGGAGTAAATGGCTGGAAATCAAAGTGCTCGTGTGGTCAGATGCTTaGAGCAGCTGTTGGGACCTG +
Preference number: 4 (lower is better)
Translates to: LVVAGERTWSKWLEIKVLVWSDA*SSCWDL
Trigger: CAGGTCCCAACAGCTGCTTCAAGCATCTGACCACAC...GAGCACTTTGATTTCCAGCCATTTACTCCAAGTCCTCTCCCCAGCTACCACCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426333.7
CDS-3UTR GCA 90 bp GTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCACCTACACCTCTCTCTTaGTCTGTGAAGAGGATGTCA +
Preference number: 4 (lower is better)
Translates to: VSASSTGVAAHCREQELPPTPLS*SVKRMS
Trigger: TGACATCCTCTTCACAGAGCAAGAGAGAGGTGTAGG...TGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAGCTGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR GCA 90 bp ACAACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCTCTCCTGCACCGCATaGTTGATCAGCCGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: TTRRPRHMRSQLQVQELQLSCTA*LISRSV
Trigger: CACAGAGCGGCTGATCAAGCATGCGGTGCAGGAGAG...CTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTTGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR GCA 90 bp ACAACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCTTCGTCAGGTGGATaGCAAGCTCGTCTAGGGTCC +
Preference number: 4 (lower is better)
Translates to: TTRRPRHMRSQLQVQELQPSSGG*QARLGS
Trigger: GGACCCTAGACGAGCTTGGCATCCACCTGACGAAGG...CTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR GCA 90 bp ACTTCTCTGGGAGCTGCTAGTTGGGGCCTTTTTGGTGAACTTTCGCCTAGCAAACCTTCGTCAGGTGGATaGCAAGCTCGTCTAGGGTCC +
Preference number: 4 (lower is better)
Translates to: TSLGAASWGLFGELSPSKPSSGG*QARLGS
Trigger: GGACCCTAGACGAGCTTGGCATCCACCTGACGAAGG...TTTGCTAGGCGAAAGTTCACCAAAAAGGCCCCAACTAGCAGCTCCCAGAGAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591856.1
CDS-3UTR GCA 90 bp TCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACAAAGGCGGCCCACGGTaGATATCTGGGAGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: SGLEVGELFKMATAASRHKGGPR*ISGSLP
Trigger: AGGAAGACTCCCAGATATGCACCGTGGGCCGCCTTT...GTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR GCA 90 bp TCTGACAACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGGTAGAGCTCCCCAGTaGCCAGGATCACATGCTCGC +
Preference number: 4 (lower is better)
Translates to: SDNTKATSYEVSASSTGVGRAPQ*PGSHAR
Trigger: GCGAGCATGTGATCCTGGGCACTGGGGAGCTCTACC...AACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTTGTCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR GCA 90 bp GCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGGAGTCGGAAACCTTGAACGATaGTGTCCTTCACTGAACCAA +
Preference number: 4 (lower is better)
Translates to: ASSTGVAAHCREQELPGVGNLER*CPSLNQ
Trigger: TTGGTTCAGTGAAGGACAGCATCGTTCAAGGTTTCC...GACTCCTGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR GCA 90 bp TCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACAAGCAGGAGGCCAAATaGTCCTCTCTCACTGGGGCT +
Preference number: 4 (lower is better)
Translates to: SGLEVGELFKMATAASRHKQEAK*SSLTGA
Trigger: AGCCCCAGTGAGAGAGGAGCATTTGGCCTCCTGCTT...GTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR GCA 90 bp TCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACGGCTGGAAATCAAAGTaGTCTGGCCCCCTACTCCAG +
Preference number: 4 (lower is better)
Translates to: SGLEVGELFKMATAASRHGWKSK*SGPLLQ
Trigger: CTGGAGTAGGGGGCCAGAGCACTTTGATTTCCAGCC...GTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426333.7
CDS-3UTR CCA 90 bp TCTGACAACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGGGTCCGTGGGAGGCTaGTGTCCACGTCACCTACAA +
Preference number: 4 (lower is better)
Translates to: SDNTKATSYEVSASSTGVGSVGG*CPRHLQ
Trigger: TTGTAGGTGACGTGGACACCAGCCTCCCACGGACCC...AACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTTGTCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp AACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCTCCTCCTTCGTCAGGTaGATGCCAAGCTCGTCTAGG +
Preference number: 4 (lower is better)
Translates to: NTKATSYEVSASSTGVAASSFVR*MPSSSR
Trigger: CCTAGACGAGCTTGGCATCCACCTGACGAAGGAGGA...GGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp AACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCCTTGGCGCCCACCTTTaGAGAAGGGATATGCTGCAC +
Preference number: 4 (lower is better)
Translates to: NTKATSYEVSASSTGVAALGAHL*RRDMLH
Trigger: GTGCAGCATATCCCTTCTCCAAAGGTGGGCGCCAAG...GGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp TTCACTGGGGGAGAACAGAGTAAGGGACTGGTGGTAGCTGGGGAGAGGACTTGGTACATCTTAGTAGTGTaGCACATCAGGGGGCCATCA +
Preference number: 4 (lower is better)
Translates to: FTGGEQSKGLVVAGERTWYILVV*HIRGPS
Trigger: TGATGGCCCCCTGATGTGCCACACTACTAAGATGTA...CCAAGTCCTCTCCCCAGCTACCACCAGTCCCTTACTCTGTTCTCCCCCAGTGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000426333.7
CDS-3UTR CCA 90 bp AACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCCCTCGATGTGGTACCTaGCCACAGAGATCCAAAGGC +
Preference number: 4 (lower is better)
Translates to: NTKATSYEVSASSTGVAAPRCGT*PQRSKG
Trigger: GCCTTTGGATCTCTGTGGCCAGGTACCACATCGAGG...GGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp TCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACCGGTTCACCTCGATGTaGTACCTGGCCACAGAGATC +
Preference number: 4 (lower is better)
Translates to: SGLEVGELFKMATAASRHRFTSM*YLATEI
Trigger: GATCTCTGTGGCCAGGTACCACATCGAGGTGAACCG...GTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp GTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAACAAAACGTGACAACTaGGTCAGCCACCTTGATGTC +
Preference number: 4 (lower is better)
Translates to: VSASSTGVAAHCREQELPTKRDN*VSHLDV
Trigger: GACATCAAGGTGGCTGACCCAGTTGTCACGTTTTGT...TGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAGCTGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp GTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGATCCCAATCGTACTTaGTCTGGAAGAACTCTCCCA +
Preference number: 4 (lower is better)
Translates to: VSASSTGVAAHCREQELPDPNRT*SGRTLP
Trigger: TGGGAGAGTTCTTCCAGACCAAGTACGATTGGGATC...TGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAGCTGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp ACAACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCATCCACCAGAATGTTaGGGCCAGTCGCATCAGGGC +
Preference number: 4 (lower is better)
Translates to: TTRRPRHMRSQLQVQELQHPPEC*GQSHQG
Trigger: GCCCTGATGCGACTGGCCCCAACATTCTGGTGGATG...CTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp GACAACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCACATCCACCAGAATGTTaGGGCCAGTCGCATCAGGGC +
Preference number: 4 (lower is better)
Translates to: DNTKATSYEVSASSTGVAHPPEC*GQSHQG
Trigger: GCCCTGATGCGACTGGCCCCAACATTCTGGTGGATG...TGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp GTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGTGAGTTGTTCAAGATaGCAACAGCAGCTTCCAGAC +
Preference number: 4 (lower is better)
Translates to: VSASSTGVAAHCREQELPVSCSR*QQQLPD
Trigger: GTCTGGAAGCTGCTGTTGCCATCTTGAACAACTCAC...TGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAGCTGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp CCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGACTGGGGCTCTGGGTTaGAGGTTGGTGAGTTGTTCA +
Preference number: 4 (lower is better)
Translates to: PRHMRSQLQVQELQPTVGTGALG*RLVSCS
Trigger: TGAACAACTCACCAACCTCCAACCCAGAGCCCCAGT...CCCTACAGTGGGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp TCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGGAGTCCACCTTGGAGTAAATGGCTaGAAATCAAAGTGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: SSTGVAAHCREQELPGVHLGVNG*KSKCSG
Trigger: GCCAGAGCACTTTGATTTCCAGCCATTTACTCCAAG...GTGGACTCCTGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426333.7
3UTR CAA 72 bp AAATGCTCCTCTCTCACTGGGGCTCTGGGTTGGAGGTaGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCA +
Preference number: 4 (lower is better)
Translates to: KCSSLTGALGWR*VSCSRWQQQLP
Trigger: TGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGAGCCCCAGTGAGAGAGGAGCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
3UTR CAA 72 bp CTAGGACGCCTGAGAGCCAGAGGACGGGTGAAGGGTTaGATGCCAAGGGGCATTATTTCTTTTCTCTCACAC +
Preference number: 4 (lower is better)
Translates to: LGRLRARGRVKG*MPRGIISFLSH
Trigger: GTGTGAGAGAAAAGAAATAATGCCCCTTGGCATCAAACCCTTCACCCGTCCTCTGGCTCTCAGGCGTCCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426333.7
CDS-3UTR TCA 90 bp ACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACTGCGCAAGCCAGCTGTaGCCTCATCAGAGAAATTCA +
Preference number: 4 (lower is better)
Translates to: TKATSYEVSASSTGVAAHCASQL*PHQRNS
Trigger: TGAATTTCTCTGATGAGGTCACAGCTGGCTTGCGCA...GTGGGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp GACAACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCATTTTGCAGACCAGCCTaGGCAAGGGGCGGATGTTCA +
Preference number: 4 (lower is better)
Translates to: DNTKATSYEVSASSTGVAFCRPA*ARGGCS
Trigger: TGAACATCCGCCCCTTGCTCAGGCTGGTCTGCAAAA...TGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp GACAACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAACCCGGCCAAAGGCGTaGAACTGGACTCCATCATCT +
Preference number: 4 (lower is better)
Translates to: DNTKATSYEVSASSTGVATRPKA*NWTPSS
Trigger: AGATGATGGAGTCCAGTTTCACGCCTTTGGCCGGGT...TGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp GAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACTCTCTGACAACACGAAGGAAGGGTCGGAAAATCTaGGCCTCCTCATTGCCTCGG +
Preference number: 4 (lower is better)
Translates to: ELFKMATAASRHSLTTRRKGRKI*ASSLPR
Trigger: CCGAGGCAATGAGGAGGCTCAGATTTTCCGACCCTT...CCTTCGTGTTGTCAGAGAGTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp CATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGATGGATAGCTCTTGTTaGCCTTGCGCAGGCCATCAA +
Preference number: 4 (lower is better)
Translates to: HMRSQLQVQELQPTVGSRMDSSC*PCAGHQ
Trigger: TTGATGGCCTGCGCAAGGTCAACAAGAGCTATCCAT...CCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp GAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACTCTCTGACAACACGAAGGCCGTCTCACAAAACGTaGCAACTGGGTCAGCCACCT +
Preference number: 4 (lower is better)
Translates to: ELFKMATAASRHSLTTRRPSHKT*QLGQPP
Trigger: AGGTGGCTGACCCAGTTGTCACGTTTTGTGAGACGG...CCTTCGTGTTGTCAGAGAGTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp AGGTCAGAATGTTCTGTTCACTTGCAAACCATGGCTAAGGTCAAACTTGTAGAAGGGATGGGTGCATCCTaGGTCACGTGCCCCCTGCGC +
Preference number: 4 (lower is better)
Translates to: RSECSVHLQTMAKVKLVEGMGAS*VTCPLR
Trigger: GCGCAGGGGGCACGTGACTCAGGATGCACCCATCCC...TTCTACAAGTTTGACCTTAGCCATGGTTTGCAAGTGAACAGAACATTCTGACCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426333.7
ENST00000592576.5
CDS-3UTR TCA 90 bp CTGATGTGTAACATGACAATAACCACCCCTGGCCTGCCTACCTTGCAGGCTGCTGAAGGCCACGTCATATaGGGTCTCAGCTTCAAGTAC +
Preference number: 4 (lower is better)
Translates to: LMCNMTITTPGLPTLQAAEGHVI*GLSFKY
Trigger: GTACTTGAAGCTGAGACCTCATATGACGTGGCCTTC...AGCAGCCTGCAAGGTAGGCAGGCCAGGGGTGGTTATTGTCATGTTACACATCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426333.7
CDS-3UTR GCA 90 bp CTCACTGGGGCTCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCCACAAAACATGTCTTaGCATGGTGGAGATGTCCAC +
Preference number: 4 (lower is better)
Translates to: LTGALGWRLVSCSRWQQQPQNMS*HGGDVH
Trigger: GTGGACATCTCCACCATGGCAAGACATGTTTTGTGG...CTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGAGCCCCAGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426333.7
ENST00000591382.5
CDS-3UTR GCA 90 bp GAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACTCTCTGACAACACGAAGGAAAGGCGGCCCACGGTaGATATCTGGGAGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: ELFKMATAASRHSLTTRRKGGPR*ISGSLP
Trigger: AGGAAGACTCCCAGATATGCACCGTGGGCCGCCTTT...CCTTCGTGTTGTCAGAGAGTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR GCA 90 bp ACAACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGAAAGGCGGCCCACGGTaGATATCTGGGAGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: TTRRPRHMRSQLQVQELQKGGPR*ISGSLP
Trigger: AGGAAGACTCCCAGATATGCACCGTGGGCCGCCTTT...CTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR GCA 90 bp ACAACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGTCTGAGCCTCCTCATTaGCTCGGGGTTCGGTTATGG +
Preference number: 4 (lower is better)
Translates to: TTRRPRHMRSQLQVQELQSEPPH*LGVRLW
Trigger: CCATAACCGAACCCCGAGGCAATGAGGAGGCTCAGA...CTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR GCA 90 bp GGCTCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCAGAATTCTCTATGTCCTCTaGCAGGCCCTTCTCAAGAGG +
Preference number: 4 (lower is better)
Translates to: GSGLEVGELFKMATAASRILYVL*QALLKR
Trigger: CCTCTTGAGAAGGGCCTGGCAGAGGACATAGAGAAT...TCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR GCA 90 bp GGCAGTGAAGCCTCTTGGGAGATGACATATATTCAGAATGTAAGCACCAGACGGTGCAGAGACGCAATCTaGAGGGGCCTGGACCTCTAC +
Preference number: 4 (lower is better)
Translates to: GSEASWEMTYIQNVSTRRCRDAI*RGLDLY
Trigger: GTAGAGGTCCAGGCCCCTGCAGATTGCGTCTCTGCA...CCGTCTGGTGCTTACATTCTGAATATATGTCATCTCCCAAGAGGCTTCACTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426333.7
CDS-3UTR GCA 90 bp CCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGCAGGACGGTATAAACTaGAGAGACGCAATCTGCAGG +
Preference number: 4 (lower is better)
Translates to: PRHMRSQLQVQELQPTVGQDGIN*RDAICR
Trigger: CCTGCAGATTGCGTCTCTGCAGTTTATACCGTCCTG...CCCTACAGTGGGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR GCA 90 bp GCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGGAGTCTTTCTCTCACACAGGTaGTGTGTACACAATGTACAG +
Preference number: 4 (lower is better)
Translates to: ASSTGVAAHCREQELPGVFLSHR*CVHNVQ
Trigger: CTGTACATTGTGTACACAGCACCTGTGTGAGAGAAA...GACTCCTGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426333.7
CDS-3UTR GCA 90 bp TCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACATCCATGATGCTCACTaGCGCTTCCCGCTACAATGC +
Preference number: 4 (lower is better)
Translates to: SGLEVGELFKMATAASRHIHDAH*RFPLQC
Trigger: GCATTGTAGCGGGAAGCGGCAGTGAGCATCATGGAT...GTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591382.5
CDS-3UTR CCA 90 bp TGGGGCTCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCTTTTCCTTTGGTGTCTaGCAAGACCACTGTCACAGG +
Preference number: 4 (lower is better)
Translates to: WGSGLEVGELFKMATAASFSFGV*QDHCHR
Trigger: CCTGTGACAGTGGTCTTGCCAGACACCAAAGGAAAA...GGAAGCTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGAGCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp ACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACCTGGGAGCTGCTAGTTaGGGCCTTTTTGGTGAACTT +
Preference number: 4 (lower is better)
Translates to: TKATSYEVSASSTGVAAHLGAAS*GLFGEL
Trigger: AAGTTCACCAAAAAGGCCCCAACTAGCAGCTCCCAG...GTGGGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp GACAACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCTCAATCTTGGGCTTaGCGCCCACCTTTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: DNTKATSYEVSASSTGVAAQSWA*RPPLEK
Trigger: CTTCTCCAAAGGTGGGCGCCAAGCCCAAGATTGAGC...TGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp ACAACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGAGGTGTGCTCAATCTTaGGCTTGGCGCCCACCTTTG +
Preference number: 4 (lower is better)
Translates to: TTRRPRHMRSQLQVQELQRCAQS*AWRPPL
Trigger: CAAAGGTGGGCGCCAAGCCCAAGATTGAGCACACCT...CTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp GAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACTCTCTGACAACACGAAGGCCCACGGTGCATATCTaGGAGTCTTCCTCATCCTCC +
Preference number: 4 (lower is better)
Translates to: ELFKMATAASRHSLTTRRPTVHI*ESSSSS
Trigger: GGAGGATGAGGAAGACTCCCAGATATGCACCGTGGG...CCTTCGTGTTGTCAGAGAGTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp GACAACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCACCTCGATGTGGTACCTaGCCACAGAGATCCAAAGGC +
Preference number: 4 (lower is better)
Translates to: DNTKATSYEVSASSTGVAPRCGT*PQRSKG
Trigger: GCCTTTGGATCTCTGTGGCCAGGTACCACATCGAGG...TGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp GAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACTCTCTGACAACACGAAGGCGGTTCACCTCGATGTaGTACCTGGCCACAGAGATC +
Preference number: 4 (lower is better)
Translates to: ELFKMATAASRHSLTTRRRFTSM*YLATEI
Trigger: GATCTCTGTGGCCAGGTACCACATCGAGGTGAACCG...CCTTCGTGTTGTCAGAGAGTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp CTCACTGGGGCTCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGACAAAACGTGACAACTaGGTCAGCCACCTTGATGTC +
Preference number: 4 (lower is better)
Translates to: LTGALGWRLVSCSRWQQQTKRDN*VSHLDV
Trigger: GACATCAAGGTGGCTGACCCAGTTGTCACGTTTTGT...CTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGAGCCCCAGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp GTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCACTGTTCCACGTAATCTaGACCACCTCATTCTCTATG +
Preference number: 4 (lower is better)
Translates to: VSASSTGVAAHCREQELPLFHVI*TTSFSM
Trigger: CATAGAGAATGAGGTGGTCCAGATTACGTGGAACAG...TGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAGCTGAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp ACAACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCTCCTCTCTTTTCCTTaGGAATGGAGCCCGGCAGAG +
Preference number: 4 (lower is better)
Translates to: TTRRPRHMRSQLQVQELQLLSFP*EWSPAE
Trigger: CTCTGCCGGGCTCCATTCCCAAGGAAAAGAGAGGAG...CTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp TCCTCTCTCACTGGGGCTCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAAAAAGATAGGGCCCCTTaGGGTTTCATCCCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: SSLTGALGWRLVSCSRWQKDRAP*GFIPFS
Trigger: AGAGAAGGGGATGAAACCCCAAGGGGCCCTATCTTT...TTGCCATCTTGAACAACTCACCAACCTCCAACCCAGAGCCCCAGTGAGAGAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp TCTGACAACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGACAATAACCACCCCTaGCCTGCCTACCTTGCAGGC +
Preference number: 4 (lower is better)
Translates to: SDNTKATSYEVSASSTGVDNNHP*PAYLAG
Trigger: GCCTGCAAGGTAGGCAGGCCAGGGGTGGTTATTGTC...AACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTTGTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426333.7
CDS-3UTR CCA 90 bp GAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACTCTCTGACAACACGAAGGAGTGAGCGAGGGGACTaGACAGTTAGAGCACCACTC +
Preference number: 4 (lower is better)
Translates to: ELFKMATAASRHSLTTRRSERGD*TVRAPL
Trigger: GAGTGGTGCTCTAACTGTCCAGTCCCCTCGCTCACT...CCTTCGTGTTGTCAGAGAGTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591382.5
CDS-3UTR TCA 90 bp TCTGACAACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTAAGGACCACTCCATCTaGGATGCGCAAGCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: SDNTKATSYEVSASSTGVKDHSI*DAQASC
Trigger: ACAGCTGGCTTGCGCATCTCAGATGGAGTGGTCCTT...AACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTTGTCAGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp TGGGGCTCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCTGTCCACAAAGCCTGTaGACTCGCCAAAGAACTTTT +
Preference number: 4 (lower is better)
Translates to: WGSGLEVGELFKMATAASCPQSL*TRQRTF
Trigger: AAAAGTTCTTTGGCGAGTTCACAGGCTTTGTGGACA...GGAAGCTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGAGCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp GTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACTCTCTGACAACAAAGGGTCGGAAAATCTaGGCCTCCTCATTGCCTCGG +
Preference number: 4 (lower is better)
Translates to: VGELFKMATAASRHSLTTKGRKI*ASSLPR
Trigger: CCGAGGCAATGAGGAGGCTCAGATTTTCCGACCCTT...TGTTGTCAGAGAGTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp AACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCATGGATAGCTCTTGTTaGCCTTGCGCAGGCCATCAA +
Preference number: 4 (lower is better)
Translates to: NTKATSYEVSASSTGVAAMDSSC*PCAGHQ
Trigger: TTGATGGCCTGCGCAAGGTCAACAAGAGCTATCCAT...GGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp GTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACTCTCTGACAACACCTCCACCTTGGTGGTaGGGGATGGATAGCTCTTGT +
Preference number: 4 (lower is better)
Translates to: VGELFKMATAASRHSLTTPPPWW*GMDSSC
Trigger: ACAAGAGCTATCCATCCCTCACCACCAAGGTGGAGG...TGTTGTCAGAGAGTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp TCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACCTGGGTCAGCCACCTTaGTGTCTATCTCTGAGTACA +
Preference number: 4 (lower is better)
Translates to: SGLEVGELFKMATAASRHLGQPP*CLSLST
Trigger: TGTACTCAGAGATAGACATCAAGGTGGCTGACCCAG...GTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp TCTGACAACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTCCGTCTCACAAAACGTaGCAACTGGGTCAGCCACCT +
Preference number: 4 (lower is better)
Translates to: SDNTKATSYEVSASSTGVPSHKT*QLGQPP
Trigger: AGGTGGCTGACCCAGTTGTCACGTTTTGTGAGACGG...AACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTTGTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp CATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGTTTCAGCAAAGCACTTaGGGGAGGATGTTTCCACCA +
Preference number: 4 (lower is better)
Translates to: HMRSQLQVQELQPTVGSRFQQST*GRMFPP
Trigger: TGGTGGAAACATCCTCCCTCAAGTGCTTTGCTGAAA...CCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp GACAACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCACCCCACTGGAAACCTTaGACGATGCTGTCCTTCACT +
Preference number: 4 (lower is better)
Translates to: DNTKATSYEVSASSTGVAPHWKP*TMLSFT
Trigger: AGTGAAGGACAGCATCGTTCAAGGTTTCCAGTGGGG...TGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp AGCAACATAGGATCATCGAAGAATTTGCTGATGCTCACATCTTCACTGAGGCCCGCTTGTCCCTGGGTGTaGGTCCGGAGATCAGTCTCA +
Preference number: 4 (lower is better)
Translates to: SNIGSSKNLLMLTSSLRPACPWV*VRRSVS
Trigger: TGAGACTGATCTCCGGACTCACACCCAGGGACAAGC...GGGCCTCAGTGAAGATGTGAGCATCAGCAAATTCTTCGATGATCCTATGTTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589769.1
CDS-3UTR TCA 90 bp CCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGCTCACATGGGGTAATTaGGCACAACATCCTGTTTGG +
Preference number: 4 (lower is better)
Translates to: PRHMRSQLQVQELQPTVGLTWGN*AQHPVW
Trigger: CCAAACAGGATGTTGTGCTCAATTACCCCATGTGAG...CCCTACAGTGGGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp GGCTCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACTCACATGGGGTAATTaGGCACAACATCCTGTTTGG +
Preference number: 4 (lower is better)
Translates to: GSGLEVGELFKMATAASRLTWGN*AQHPVW
Trigger: CCAAACAGGATGTTGTGCTCAATTACCCCATGTGAG...TCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp AACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCGAAGGCCACGTCATATaGGGTCTCAGCTTCAAGTAC +
Preference number: 4 (lower is better)
Translates to: NTKATSYEVSASSTGVAAEGHVI*GLSFKY
Trigger: GTACTTGAAGCTGAGACCTCATATGACGTGGCCTTC...GGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp GTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACTCTCTGACAACACTTCCAGACACTCTCTaGCAACACGAAGGCCACGTC +
Preference number: 4 (lower is better)
Translates to: VGELFKMATAASRHSLTTLPDTL*QHEGHV
Trigger: GACGTGGCCTTCGTGTTGTCAGAGAGTGTCTGGAAG...TGTTGTCAGAGAGTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp CACTCACATGGGGTAATTGAGCACAACATCCTGTTTGGCAAGTTCCAGCAACATAGTCACGTGCCCCCATaGGGAAGGCAGAGTAGACGA +
Preference number: 4 (lower is better)
Translates to: HSHGVIEHNILFGKFQQHSHVPP*GRQSRR
Trigger: TCGTCTACTCTGCCTTCCTCATGGGGGCACGTGACT...ATGTTGCTGGAACTTGCCAAACAGGATGTTGTGCTCAATTACCCCATGTGAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589769.1
CDS-3UTR TCA 90 bp ACAACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGGGTCATAGCGCTTTCTaGTTTCCGGGTGAGTCTTGC +
Preference number: 4 (lower is better)
Translates to: TTRRPRHMRSQLQVQELQGHSAF*FPGESC
Trigger: GCAAGACTCACCCGGAAATCAGAAAGCGCTATGACC...CTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592576.5
CDS-3UTR GCA 90 bp TCCTCTCTCACTGGGGCTCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACCACAAAACATGTCTTaGCATGGTGGAGATGTCCAC +
Preference number: 4 (lower is better)
Translates to: SSLTGALGWRLVSCSRWQPQNMS*HGGDVH
Trigger: GTGGACATCTCCACCATGGCAAGACATGTTTTGTGG...TTGCCATCTTGAACAACTCACCAACCTCCAACCCAGAGCCCCAGTGAGAGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000426333.7
ENST00000591382.5
CDS-3UTR GCA 90 bp AGGTGGTGGGGTAGACTTCTGATCGCAGGAACCCAACAACTCCCAAGCCATCTTCCTACACCTCTCTCTTaGTCTGTGAAGAGGATGTCA +
Preference number: 4 (lower is better)
Translates to: RWWGRLLIAGTQQLPSHLPTPLS*SVKRMS
Trigger: TGACATCCTCTTCACAGAGCAAGAGAGAGGTGTAGG...AAGATGGCTTGGGAGTTGTTGGGTTCCTGCGATCAGAAGTCTACCCCACCACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426333.7
CDS-3UTR GCA 90 bp GGCTCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACCTACACCTCTCTCTTaGTCTGTGAAGAGGATGTCA +
Preference number: 4 (lower is better)
Translates to: GSGLEVGELFKMATAASRPTPLS*SVKRMS
Trigger: TGACATCCTCTTCACAGAGCAAGAGAGAGGTGTAGG...TCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR GCA 90 bp AAAGGAGCAGAGCAAGACAGAGGTCAGAATGTTCTGTTCACTTGCAAACCATGGACTGCCAGCCTCTCCTaGACCGCATGCTTGATCAGC +
Preference number: 4 (lower is better)
Translates to: KGAEQDRGQNVLFTCKPWTASLS*TACLIS
Trigger: GCTGATCAAGCATGCGGTGCAGGAGAGGCTGGCAGT...CCATGGTTTGCAAGTGAACAGAACATTCTGACCTCTGTCTTGCTCTGCTCCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426333.7
ENST00000592576.5
CDS-3UTR GCA 90 bp ACCCAACAACTCCCAAGCCATCTTAGGTTCCACCCAGAAGCAGCATGGAGTGGGGGGTTCGGTTATGGTTaGTGTCTTCACAATTGGTTG +
Preference number: 4 (lower is better)
Translates to: TQQLPSHLRFHPEAAWSGGFGYG*CLHNWL
Trigger: CAACCAATTGTGAAGACAGCAACCATAACCGAACCC...CCCACTCCATGCTGCTTCTGGGTGGAACCTAAGATGGCTTGGGAGTTGTTGGGT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000426333.7
CDS-3UTR GCA 90 bp TCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACATTCTCTATGTCCTCTaGCAGGCCCTTCTCAAGAGG +
Preference number: 4 (lower is better)
Translates to: SGLEVGELFKMATAASRHILYVL*QALLKR
Trigger: CCTCTTGAGAAGGGCCTGGCAGAGGACATAGAGAAT...GTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR GCA 90 bp AACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCATTCTCTATGTCCTCTaGCAGGCCCTTCTCAAGAGG +
Preference number: 4 (lower is better)
Translates to: NTKATSYEVSASSTGVAAILYVL*QALLKR
Trigger: CCTCTTGAGAAGGGCCTGGCAGAGGACATAGAGAAT...GGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR GCA 90 bp GTGGTAGCTGGGGAGAGGACTTGGAGTAAATGGCTGGAAATCAAAGTGCTCTGGCAGGACGGTATAAACTaGAGAGACGCAATCTGCAGG +
Preference number: 4 (lower is better)
Translates to: VVAGERTWSKWLEIKVLWQDGIN*RDAICR
Trigger: CCTGCAGATTGCGTCTCTGCAGTTTATACCGTCCTG...CCAGAGCACTTTGATTTCCAGCCATTTACTCCAAGTCCTCTCCCCAGCTACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426333.7
CDS-3UTR GCA 90 bp TGGACTCTCAAGGGAGCAGCTAGAGGTGAACCCCTAGGACGCCTGAGAGCCAGAAATGTTCTGTTCACTTaGAAACCATGGCTAAGGTCA +
Preference number: 4 (lower is better)
Translates to: WTLKGAARGEPLGRLRARNVLFT*KPWLRS
Trigger: TGACCTTAGCCATGGTTTGCAAGTGAACAGAACATT...TCTGGCTCTCAGGCGTCCTAGGGGTTCACCTCTAGCTGCTCCCTTGAGAGTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426333.7
CDS-3UTR GCA 90 bp TCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACGGTTGTGTGGTCAGATaGTTGAAGCAGCTGTTGGGA +
Preference number: 4 (lower is better)
Translates to: SGLEVGELFKMATAASRHGCVVR*LKQLLG
Trigger: TCCCAACAGCTGCTTCAAGCATCTGACCACACAACC...GTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426333.7
CDS-3UTR GCA 90 bp ACAACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGTTTCCGGGTGAGTCTTaGCATGGTGGAGATGTCCAC +
Preference number: 4 (lower is better)
Translates to: TTRRPRHMRSQLQVQELQFPGES*HGGDVH
Trigger: GTGGACATCTCCACCATGGCAAGACTCACCCGGAAA...CTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592576.5
CDS-3UTR CCA 90 bp GAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACTCTCTGACAACACGAAGGCACCTCCTCGGCTGTTaGGTAGTACTTCTTGTCCTC +
Preference number: 4 (lower is better)
Translates to: ELFKMATAASRHSLTTRRHLLGC*VVLLVL
Trigger: GAGGACAAGAAGTACTACCCAACAGCCGAGGAGGTG...CCTTCGTGTTGTCAGAGAGTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp ACAACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCACCTCCTCGGCTGTTaGGTAGTACTTCTTGTCCTC +
Preference number: 4 (lower is better)
Translates to: TTRRPRHMRSQLQVQELQHLLGC*VVLLVL
Trigger: GAGGACAAGAAGTACTACCCAACAGCCGAGGAGGTG...CTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTTGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp ACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACGTAATAAGCATCAGTTaGAGGCAGCTTCAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: TKATSYEVSASSTGVAAHVISIS*RQLQLQ
Trigger: CTGGAGCTGAAGCTGCCTCCAACTGATGCTTATTAC...GTGGGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp TCTGACAACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTCTTGGCGCCCACCTTTaGAGAAGGGATATGCTGCAC +
Preference number: 4 (lower is better)
Translates to: SDNTKATSYEVSASSTGVLGAHL*RRDMLH
Trigger: GTGCAGCATATCCCTTCTCCAAAGGTGGGCGCCAAG...AACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTTGTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp GGCAGTGAAGCCTCTTGGGAGATGACATATATTCAGAATGTAAGCACCAGACGGGCTCAATCTTGGGCTTaGCGCCCACCTTTGGAGAAG +
Preference number: 4 (lower is better)
Translates to: GSEASWEMTYIQNVSTRRAQSWA*RPPLEK
Trigger: CTTCTCCAAAGGTGGGCGCCAAGCCCAAGATTGAGC...CCGTCTGGTGCTTACATTCTGAATATATGTCATCTCCCAAGAGGCTTCACTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426333.7
CDS-3UTR CCA 90 bp GGCAGTGAAGCCTCTTGGGAGATGACATATATTCAGAATGTAAGCACCAGACGGCCCACGGTGCATATCTaGGAGTCTTCCTCATCCTCC +
Preference number: 4 (lower is better)
Translates to: GSEASWEMTYIQNVSTRRPTVHI*ESSSSS
Trigger: GGAGGATGAGGAAGACTCCCAGATATGCACCGTGGG...CCGTCTGGTGCTTACATTCTGAATATATGTCATCTCCCAAGAGGCTTCACTGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426333.7
CDS-3UTR CCA 90 bp TCTGACAACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTCCCACGGTGCATATCTaGGAGTCTTCCTCATCCTCC +
Preference number: 4 (lower is better)
Translates to: SDNTKATSYEVSASSTGVPTVHI*ESSSSS
Trigger: GGAGGATGAGGAAGACTCCCAGATATGCACCGTGGG...AACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTTGTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp GTGAACTGTCAGATAAGTGGTTTCCCCAGGTTGTGTGGTCAGATGCTTGAAGCACCTCGATGTGGTACCTaGCCACAGAGATCCAAAGGC +
Preference number: 4 (lower is better)
Translates to: VNCQISGFPRLCGQMLEAPRCGT*PQRSKG
Trigger: GCCTTTGGATCTCTGTGGCCAGGTACCACATCGAGG...TGCTTCAAGCATCTGACCACACAACCTGGGGAAACCACTTATCTGACAGTTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426333.7
CDS-3UTR CCA 90 bp CAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGGAGTCCACGTGCTGTCTTCACAATTaGTTGATCAACACCTTCAAT +
Preference number: 4 (lower is better)
Translates to: QVQELQPTVGSRSSQESTCCLHN*LINTFN
Trigger: ATTGAAGGTGTTGATCAACCAATTGTGAAGACAGCA...CGTGGACTCCTGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp CCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGCTCGGGGTTCGGTTATaGTTGCTGTCTTCACAATTG +
Preference number: 4 (lower is better)
Translates to: PRHMRSQLQVQELQPTVGLGVRL*LLSSQL
Trigger: CAATTGTGAAGACAGCAACCATAACCGAACCCCGAG...CCCTACAGTGGGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp ACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACCTCGGGGTTCGGTTATaGTTGCTGTCTTCACAATTG +
Preference number: 4 (lower is better)
Translates to: TKATSYEVSASSTGVAAHLGVRL*LLSSQL
Trigger: CAATTGTGAAGACAGCAACCATAACCGAACCCCGAG...GTGGGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp CCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGCTTGGTGGTGAGGGATaGATAGCTCTTGTTGACCTT +
Preference number: 4 (lower is better)
Translates to: PRHMRSQLQVQELQPTVGLGGEG*IALVDL
Trigger: AAGGTCAACAAGAGCTATCCATCCCTCACCACCAAG...CCCTACAGTGGGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp CATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGGATCCCAATCGTACTTaGTCTGGAAGAACTCTCCCA +
Preference number: 4 (lower is better)
Translates to: HMRSQLQVQELQPTVGSRDPNRT*SGRTLP
Trigger: TGGGAGAGTTCTTCCAGACCAAGTACGATTGGGATC...CCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp TCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACGGCACAATCTGCCAGTaGTGGAAGACAGACAGAGAA +
Preference number: 4 (lower is better)
Translates to: SGLEVGELFKMATAASRHGTICQ*WKTDRE
Trigger: TTCTCTGTCTGTCTTCCACCACTGGCAGATTGTGCC...GTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp TTGGGAGATGACATATATTCAGAATGTAAGCACCAGACGGGGCAGGGGAGACGAACTGGGGCTCTGGGTTaGAGGTTGGTGAGTTGTTCA +
Preference number: 4 (lower is better)
Translates to: LGDDIYSECKHQTGQGRRTGALG*RLVSCS
Trigger: TGAACAACTCACCAACCTCCAACCCAGAGCCCCAGT...TCGTCTCCCCTGCCCCGTCTGGTGCTTACATTCTGAATATATGTCATCTCCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000426333.7
CDS-3UTR CCA 90 bp CTGGTGGTAGCTGGGGAGAGGACTTGGAGTAAATGGCTGGAAATCAAAGTGCTCAGTTTCCTGAGGAGGTaGTGGGGTAGACTTCTGATC +
Preference number: 4 (lower is better)
Translates to: LVVAGERTWSKWLEIKVLSFLRR*WGRLLI
Trigger: GATCAGAAGTCTACCCCACCACCTCCTCAGGAAACT...GAGCACTTTGATTTCCAGCCATTTACTCCAAGTCCTCTCCCCAGCTACCACCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426333.7
3UTR CAA 72 bp TTGGTGTCTGGCAAGACCACTGTCACAGGAGTGCTTTaGATGCCTACACCTCTCTCTTGCTCTGTGAAGAGG +
Preference number: 4 (lower is better)
Translates to: LVSGKTTVTGVL*MPTPLSCSVKR
Trigger: CCTCTTCACAGAGCAAGAGAGAGGTGTAGGCATCAAAAGCACTCCTGTGACAGTGGTCTTGCCAGACACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588374.1
CDS-3UTR TCA 90 bp GAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACTCTCTGACAACACGAAGGGGTCATAGCGCTTTCTaGTTTCCGGGTGAGTCTGTT +
Preference number: 4 (lower is better)
Translates to: ELFKMATAASRHSLTTRRGHSAF*FPGESV
Trigger: AACAGACTCACCCGGAAATCAGAAAGCGCTATGACC...CCTTCGTGTTGTCAGAGAGTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
CDS-3UTR TCA 90 bp TTGGTGTCTGGCAAGACCACTGTCACAGGAGTGCTTTTGATGCCTACACCTCTCCTCTCTCTTGCTCTGTaGAGAGGATGTCAGTATAGC +
Preference number: 4 (lower is better)
Translates to: LVSGKTTVTGVLLMPTPLLSLAL*RGCQYS
Trigger: GCTATACTGACATCCTCTTCACAGAGCAAGAGAGAG...GAGAGGTGTAGGCATCAAAAGCACTCCTGTGACAGTGGTCTTGCCAGACACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588374.1
CDS-3UTR TCA 90 bp AACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCTCACAGGAGTGCTTTTaGTGCCTACACCTCTCTCTT +
Preference number: 4 (lower is better)
Translates to: NTKATSYEVSASSTGVAASQECF*CLHLSL
Trigger: AAGAGAGAGGTGTAGGCATCAAAAGCACTCCTGTGA...GGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp GTGGTAGCTGGGGAGAGGACTTGGAGTAAATGGCTGGAAATCAAAGTGCTCTGGTCACAGGAGTGCTTTTaGTGCCTACACCTCTCTCTT +
Preference number: 4 (lower is better)
Translates to: VVAGERTWSKWLEIKVLWSQECF*CLHLSL
Trigger: AAGAGAGAGGTGTAGGCATCAAAAGCACTCCTGTGA...CCAGAGCACTTTGATTTCCAGCCATTTACTCCAAGTCCTCTCCCCAGCTACCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426333.7
CDS-3UTR TCA 90 bp ACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACTGTCCACAAAGCCTGTaGACTCGCCAAAGAACTTTT +
Preference number: 4 (lower is better)
Translates to: TKATSYEVSASSTGVAAHCPQSL*TRQRTF
Trigger: AAAAGTTCTTTGGCGAGTTCACAGGCTTTGTGGACA...GTGGGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp ACGCCTGAGAGCCAGAGGACGGGTGAAGGGTTTGATGCCAAGGGGCATTATTTCCTTGATGTCTATCTCTaGGTACATCTTCCGCAAATC +
Preference number: 4 (lower is better)
Translates to: TPESQRTGEGFDAKGHYFLDVYL*VHLPQI
Trigger: GATTTGCGGAAGATGTACTCAGAGATAGACATCAAG...GAAATAATGCCCCTTGGCATCAAACCCTTCACCCGTCCTCTGGCTCTCAGGCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426333.7
CDS-3UTR TCA 90 bp CTCACTGGGGCTCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTGATGTCTATCTCTaGGTACATCTTCCGCAAATC +
Preference number: 4 (lower is better)
Translates to: LTGALGWRLVSCSRWQQQLDVYL*VHLPQI
Trigger: GATTTGCGGAAGATGTACTCAGAGATAGACATCAAG...CTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGAGCCCCAGTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp TCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACTTTCAGCAAAGCACTTaGGGGAGGATGTTTCCACCA +
Preference number: 4 (lower is better)
Translates to: SGLEVGELFKMATAASRHFQQST*GRMFPP
Trigger: TGGTGGAAACATCCTCCCTCAAGTGCTTTGCTGAAA...GTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp TCTGACAACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTCCCCACTGGAAACCTTaGACGATGCTGTCCTTCACT +
Preference number: 4 (lower is better)
Translates to: SDNTKATSYEVSASSTGVPHWKP*TMLSFT
Trigger: AGTGAAGGACAGCATCGTTCAAGGTTTCCAGTGGGG...AACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTTGTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp GAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACTCTCTGACAACACGAAGGGAAGGCCACGTCATATaGGGTCTCAGCTTCAAGTAC +
Preference number: 4 (lower is better)
Translates to: ELFKMATAASRHSLTTRREGHVI*GLSFKY
Trigger: GTACTTGAAGCTGAGACCTCATATGACGTGGCCTTC...CCTTCGTGTTGTCAGAGAGTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp GAGCAAGACAGAGGTCAGAATGTTCTGTTCACTTGCAAACCATGGCTAAGGTCACAGGGGAGACGAGGATaGAAGGAGCAGAGCAAGACA +
Preference number: 4 (lower is better)
Translates to: EQDRGQNVLFTCKPWLRSQGRRG*KEQSKT
Trigger: TGTCTTGCTCTGCTCCTTTCATCCTCGTCTCCCCTG...TGACCTTAGCCATGGTTTGCAAGTGAACAGAACATTCTGACCTCTGTCTTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426333.7
ENST00000592576.5
CDS-3UTR TCA 90 bp GTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACTCTCTGACAACATACGATTTTACGGACTaGGGCTATAGAGGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: VGELFKMATAASRHSLTTYDFTD*GYRGSP
Trigger: GGGGCTGCCTCTATAGCCTCAGTCCGTAAAATCGTA...TGTTGTCAGAGAGTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591382.5
CDS-3UTR GCA 90 bp GTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACTCTCTGACAACACATCCATCTCTCGCCTaGTCAGCTAAGAGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: VGELFKMATAASRHSLTTHPSLA*SAKSSQ
Trigger: CTGGGAACTCTTAGCTGAGCAGGCGAGAGATGGATG...TGTTGTCAGAGAGTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402521.7
CDS-3UTR GCA 90 bp TTGGTGTCTGGCAAGACCACTGTCACAGGAGTGCTTTTGATGCCTACACCTCTCCCTACACCTCTCTCTTaGTCTGTGAAGAGGATGTCA +
Preference number: 4 (lower is better)
Translates to: LVSGKTTVTGVLLMPTPLPTPLS*SVKRMS
Trigger: TGACATCCTCTTCACAGAGCAAGAGAGAGGTGTAGG...GAGAGGTGTAGGCATCAAAAGCACTCCTGTGACAGTGGTCTTGCCAGACACCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588374.1
CDS-3UTR GCA 90 bp CATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGTTTGGAGAAGGGATATaGTGCACACACATGTCCACA +
Preference number: 4 (lower is better)
Translates to: HMRSQLQVQELQPTVGSRFGEGI*CTHMST
Trigger: TGTGGACATGTGTGTGCAGCATATCCCTTCTCCAAA...CCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR GCA 90 bp ACTGGGGCTCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTTTTGGAGAAGGGATATaGTGCACACACATGTCCACA +
Preference number: 4 (lower is better)
Translates to: TGALGWRLVSCSRWQQQLFGEGI*CTHMST
Trigger: TGTGGACATGTGTGTGCAGCATATCCCTTCTCCAAA...AAGCTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGAGCCCCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR GCA 90 bp ACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACGGGTTCGGTTATGGTTaGTGTCTTCACAATTGGTTG +
Preference number: 4 (lower is better)
Translates to: TKATSYEVSASSTGVAAHGFGYG*CLHNWL
Trigger: CAACCAATTGTGAAGACAGCAACCATAACCGAACCC...GTGGGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR GCA 90 bp GAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACTCTCTGACAACACGAAGGATTCTCTATGTCCTCTaGCAGGCCCTTCTCAAGAGG +
Preference number: 4 (lower is better)
Translates to: ELFKMATAASRHSLTTRRILYVL*QALLKR
Trigger: CCTCTTGAGAAGGGCCTGGCAGAGGACATAGAGAAT...CCTTCGTGTTGTCAGAGAGTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR GCA 90 bp CCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGGGAAACCTTGAACGATaGTGTCCTTCACTGAACCAA +
Preference number: 4 (lower is better)
Translates to: PRHMRSQLQVQELQPTVGGNLER*CPSLNQ
Trigger: TTGGTTCAGTGAAGGACAGCATCGTTCAAGGTTTCC...CCCTACAGTGGGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp GTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACTCTCTGACAACACACCTCCTCGGCTGTTaGGTAGTACTTCTTGTCCTC +
Preference number: 4 (lower is better)
Translates to: VGELFKMATAASRHSLTTHLLGC*VVLLVL
Trigger: GAGGACAAGAAGTACTACCCAACAGCCGAGGAGGTG...TGTTGTCAGAGAGTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp CAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGGAGTCCACGTTTCTTGGTTTTCACTaGCTTAATAATGGGTTCTGT +
Preference number: 4 (lower is better)
Translates to: QVQELQPTVGSRSSQESTFLGFH*LNNGFC
Trigger: ACAGAACCCATTATTAAGCCAGTGAAAACCAAGAAA...CGTGGACTCCTGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp TCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGGAGTCCACGAAATTCACATGTCCTaGAGTGTCCATGATATTGAA +
Preference number: 4 (lower is better)
Translates to: SSTGVAAHCREQELPGVHEIHMS*SVHDIE
Trigger: TTCAATATCATGGACACTCCAGGACATGTGAATTTC...GTGGACTCCTGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp TCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACTACATCTTAGTAGTGTaGCACATCAGGGGGCCATCA +
Preference number: 4 (lower is better)
Translates to: SGLEVGELFKMATAASRHYILVV*HIRGPS
Trigger: TGATGGCCCCCTGATGTGCCACACTACTAAGATGTA...GTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp AGGTCAGAATGTTCTGTTCACTTGCAAACCATGGCTAAGGTCAAACTTGTAGAAGCTGCCCAGCATGAATaGTGCCACTCAGCACCCGGC +
Preference number: 4 (lower is better)
Translates to: RSECSVHLQTMAKVKLVEAAQHE*CHSAPG
Trigger: GCCGGGTGCTGAGTGGCACCATTCATGCTGGGCAGC...TTCTACAAGTTTGACCTTAGCCATGGTTTGCAAGTGAACAGAACATTCTGACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426333.7
ENST00000592576.5
CDS-3UTR CCA 90 bp TCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACCTTGGTGGTGAGGGATaGATAGCTCTTGTTGACCTT +
Preference number: 4 (lower is better)
Translates to: SGLEVGELFKMATAASRHLGGEG*IALVDL
Trigger: AAGGTCAACAAGAGCTATCCATCCCTCACCACCAAG...GTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp AGGTCAGAATGTTCTGTTCACTTGCAAACCATGGCTAAGGTCAAACTTGTAGAACGTGCCCCCTGCGCCTaGCCAGGACGGTATAAACTG +
Preference number: 4 (lower is better)
Translates to: RSECSVHLQTMAKVKLVERAPCA*PGRYKL
Trigger: CAGTTTATACCGTCCTGGCCAGGCGCAGGGGGCACG...TTCTACAAGTTTGACCTTAGCCATGGTTTGCAAGTGAACAGAACATTCTGACCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426333.7
ENST00000592576.5
CDS-3UTR CCA 90 bp GAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACTCTCTGACAACACGAAGGAAAGATAGGGCCCCTTaGGGTTTCATCCCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: ELFKMATAASRHSLTTRRKDRAP*GFIPFS
Trigger: AGAGAAGGGGATGAAACCCCAAGGGGCCCTATCTTT...CCTTCGTGTTGTCAGAGAGTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp ACAACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGAAAGATAGGGCCCCTTaGGGTTTCATCCCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: TTRRPRHMRSQLQVQELQKDRAP*GFIPFS
Trigger: AGAGAAGGGGATGAAACCCCAAGGGGCCCTATCTTT...CTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp ACCCAACAACTCCCAAGCCATCTTAGGTTCCACCCAGAAGCAGCATGGAGTGGGAGGACTTGGAGTAAATaGCTGGAAATCAAAGTGCTC +
Preference number: 4 (lower is better)
Translates to: TQQLPSHLRFHPEAAWSGRTWSK*LEIKVL
Trigger: GAGCACTTTGATTTCCAGCCATTTACTCCAAGTCCT...CCCACTCCATGCTGCTTCTGGGTGGAACCTAAGATGGCTTGGGAGTTGTTGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426333.7
3UTR CAA 72 bp TGTTTCGTGAACTGTCAGATAAGTGGTTTCCCCAGGTaGTGTGGTCAGATGCTTGAAGCAGCTGTTGGGACC +
Preference number: 4 (lower is better)
Translates to: CFVNCQISGFPR*CGQMLEAAVGT
Trigger: GGTCCCAACAGCTGCTTCAAGCATCTGACCACACAACCTGGGGAAACCACTTATCTGACAGTTCACGAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426333.7
CDS-3UTR TCA 90 bp ACAACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCTCTCTCTTGCTCTGTaGAGAGGATGTCAGTATAGC +
Preference number: 4 (lower is better)
Translates to: TTRRPRHMRSQLQVQELQLSLAL*RGCQYS
Trigger: GCTATACTGACATCCTCTTCACAGAGCAAGAGAGAG...CTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTTGT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp CACAGGAGTGCTTTTGATGCCTACACCTCTCTCTTGCTCTGTGAAGAGGATGTCTCACAGGAGTGCTTTTaGTGCCTACACCTCTCTCTT +
Preference number: 4 (lower is better)
Translates to: HRSAFDAYTSLLLCEEDVSQECF*CLHLSL
Trigger: AAGAGAGAGGTGTAGGCATCAAAAGCACTCCTGTGA...GACATCCTCTTCACAGAGCAAGAGAGAGGTGTAGGCATCAAAAGCACTCCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588374.1
CDS-3UTR TCA 90 bp GACAACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCATCACAGGAGTGCTTTTaGTGCCTACACCTCTCTCTT +
Preference number: 4 (lower is better)
Translates to: DNTKATSYEVSASSTGVASQECF*CLHLSL
Trigger: AAGAGAGAGGTGTAGGCATCAAAAGCACTCCTGTGA...TGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp CATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGCTTGATGTCTATCTCTaGGTACATCTTCCGCAAATC +
Preference number: 4 (lower is better)
Translates to: HMRSQLQVQELQPTVGSRLDVYL*VHLPQI
Trigger: GATTTGCGGAAGATGTACTCAGAGATAGACATCAAG...CCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp TCTGACAACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTCTGGGTCAGCCACCTTaGTGTCTATCTCTGAGTACA +
Preference number: 4 (lower is better)
Translates to: SDNTKATSYEVSASSTGVLGQPP*CLSLST
Trigger: TGTACTCAGAGATAGACATCAAGGTGGCTGACCCAG...AACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTTGTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp GTGAACTGTCAGATAAGTGGTTTCCCCAGGTTGTGTGGTCAGATGCTTGAAGCACTGGGTCAGCCACCTTaGTGTCTATCTCTGAGTACA +
Preference number: 4 (lower is better)
Translates to: VNCQISGFPRLCGQMLEALGQPP*CLSLST
Trigger: TGTACTCAGAGATAGACATCAAGGTGGCTGACCCAG...TGCTTCAAGCATCTGACCACACAACCTGGGGAAACCACTTATCTGACAGTTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426333.7
CDS-3UTR TCA 90 bp CATAGGATCATCGAAGAATTTGCTGATGCTCACATCTTCACTGAGGCCCTTCCTCCCCACTGGAAACCTTaGACGATGCTGTCCTTCACT +
Preference number: 4 (lower is better)
Translates to: HRIIEEFADAHIFTEALPPHWKP*TMLSFT
Trigger: AGTGAAGGACAGCATCGTTCAAGGTTTCCAGTGGGG...AGGAAGGGCCTCAGTGAAGATGTGAGCATCAGCAAATTCTTCGATGATCCTATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589769.1
CDS-3UTR TCA 90 bp GAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACTCTCTGACAACACGAAGGCTCACATGGGGTAATTaGGCACAACATCCTGTTTGG +
Preference number: 4 (lower is better)
Translates to: ELFKMATAASRHSLTTRRLTWGN*AQHPVW
Trigger: CCAAACAGGATGTTGTGCTCAATTACCCCATGTGAG...CCTTCGTGTTGTCAGAGAGTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp GTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACTCTCTGACAACAGAAGGCCACGTCATATaGGGTCTCAGCTTCAAGTAC +
Preference number: 4 (lower is better)
Translates to: VGELFKMATAASRHSLTTEGHVI*GLSFKY
Trigger: GTACTTGAAGCTGAGACCTCATATGACGTGGCCTTC...TGTTGTCAGAGAGTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp GTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACTCTCTGACAACACCTTGCAGGCTGCTGTaGGGTTTCTCAGATACACAA +
Preference number: 4 (lower is better)
Translates to: VGELFKMATAASRHSLTTPCRLL*GFSDTQ
Trigger: TTGTGTATCTGAGAAACCTCACAGCAGCCTGCAAGG...TGTTGTCAGAGAGTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426333.7
CDS-3UTR GCA 90 bp ACAACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCACAAAACATGTCTTaGCATGGTGGAGATGTCCAC +
Preference number: 4 (lower is better)
Translates to: TTRRPRHMRSQLQVQELQPQNMS*HGGDVH
Trigger: GTGGACATCTCCACCATGGCAAGACATGTTTTGTGG...CTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
CDS-3UTR GCA 90 bp TCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACGGAAACCTTGAACGATaGTGTCCTTCACTGAACCAA +
Preference number: 4 (lower is better)
Translates to: SGLEVGELFKMATAASRHGNLER*CPSLNQ
Trigger: TTGGTTCAGTGAAGGACAGCATCGTTCAAGGTTTCC...GTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR GCA 90 bp GTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACTCTCTGACAACACAGGACGGTATAAACTaGAGAGACGCAATCTGCAGG +
Preference number: 4 (lower is better)
Translates to: VGELFKMATAASRHSLTTQDGIN*RDAICR
Trigger: CCTGCAGATTGCGTCTCTGCAGTTTATACCGTCCTG...TGTTGTCAGAGAGTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR GCA 90 bp AAGTGTTTCGTGAACTGTCAGATAAGTGGTTTCCCCAGGTTGTGTGGTCAGATGCATGATGCTCTCGCCTaGTCAGCTAAGAGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: KCFVNCQISGFPRLCGQMHDALA*SAKSSQ
Trigger: CTGGGAACTCTTAGCTGAGCAGGCGAGAGCATCATG...CATCTGACCACACAACCTGGGGAAACCACTTATCTGACAGTTCACGAAACACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426333.7
CDS-3UTR GCA 90 bp AAAGGAGCAGAGCAAGACAGAGGTCAGAATGTTCTGTTCACTTGCAAACCATGGCATGATGCTCTCGCCTaGTCAGCTAAGAGTTCCCAG +
Preference number: 4 (lower is better)
Translates to: KGAEQDRGQNVLFTCKPWHDALA*SAKSSQ
Trigger: CTGGGAACTCTTAGCTGAGCAGGCGAGAGCATCATG...CCATGGTTTGCAAGTGAACAGAACATTCTGACCTCTGTCTTGCTCTGCTCCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426333.7
ENST00000592576.5
CDS-3UTR CCA 90 bp ACAACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGGTAATAAGCATCAGTTaGAGGCAGCTTCAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: TTRRPRHMRSQLQVQELQVISIS*RQLQLQ
Trigger: CTGGAGCTGAAGCTGCCTCCAACTGATGCTTATTAC...CTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTTGT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp TCTGACAACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTCTGGGAGCTGCTAGTTaGGGCCTTTTTGGTGAACTT +
Preference number: 4 (lower is better)
Translates to: SDNTKATSYEVSASSTGVLGAAS*GLFGEL
Trigger: AAGTTCACCAAAAAGGCCCCAACTAGCAGCTCCCAG...AACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTTGTCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp GACAGAGGTCAGAATGTTCTGTTCACTTGCAAACCATGGCTAAGGTCAAACTTGCTTGGCGCCCACCTTTaGAGAAGGGATATGCTGCAC +
Preference number: 4 (lower is better)
Translates to: DRGQNVLFTCKPWLRSNLLGAHL*RRDMLH
Trigger: GTGCAGCATATCCCTTCTCCAAAGGTGGGCGCCAAG...CAAGTTTGACCTTAGCCATGGTTTGCAAGTGAACAGAACATTCTGACCTCTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426333.7
ENST00000592576.5
CDS-3UTR CCA 90 bp ACAACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGTACATCTTAGTAGTGTaGCACATCAGGGGGCCATCA +
Preference number: 4 (lower is better)
Translates to: TTRRPRHMRSQLQVQELQYILVV*HIRGPS
Trigger: TGATGGCCCCCTGATGTGCCACACTACTAAGATGTA...CTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp GACAGAGGTCAGAATGTTCTGTTCACTTGCAAACCATGGCTAAGGTCAAACTTGCCTCGATGTGGTACCTaGCCACAGAGATCCAAAGGC +
Preference number: 4 (lower is better)
Translates to: DRGQNVLFTCKPWLRSNLPRCGT*PQRSKG
Trigger: GCCTTTGGATCTCTGTGGCCAGGTACCACATCGAGG...CAAGTTTGACCTTAGCCATGGTTTGCAAGTGAACAGAACATTCTGACCTCTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426333.7
ENST00000592576.5
CDS-3UTR CCA 90 bp GAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACTCTCTGACAACACGAAGGCTCGGGGTTCGGTTATaGTTGCTGTCTTCACAATTG +
Preference number: 4 (lower is better)
Translates to: ELFKMATAASRHSLTTRRLGVRL*LLSSQL
Trigger: CAATTGTGAAGACAGCAACCATAACCGAACCCCGAG...CCTTCGTGTTGTCAGAGAGTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp GAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACTCTCTGACAACACGAAGGCTTGGTGGTGAGGGATaGATAGCTCTTGTTGACCTT +
Preference number: 4 (lower is better)
Translates to: ELFKMATAASRHSLTTRRLGGEG*IALVDL
Trigger: AAGGTCAACAAGAGCTATCCATCCCTCACCACCAAG...CCTTCGTGTTGTCAGAGAGTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp GACAACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAACAAAACGTGACAACTaGGTCAGCCACCTTGATGTC +
Preference number: 4 (lower is better)
Translates to: DNTKATSYEVSASSTGVATKRDN*VSHLDV
Trigger: GACATCAAGGTGGCTGACCCAGTTGTCACGTTTTGT...TGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp TCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACCTGTTCCACGTAATCTaGACCACCTCATTCTCTATG +
Preference number: 4 (lower is better)
Translates to: SGLEVGELFKMATAASRHLFHVI*TTSFSM
Trigger: CATAGAGAATGAGGTGGTCCAGATTACGTGGAACAG...GTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp AACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCCTGTTCCACGTAATCTaGACCACCTCATTCTCTATG +
Preference number: 4 (lower is better)
Translates to: NTKATSYEVSASSTGVAALFHVI*TTSFSM
Trigger: CATAGAGAATGAGGTGGTCCAGATTACGTGGAACAG...GGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp GTTCACTTGCAAACCATGGCTAAGGTCAAACTTGTAGAAAATAAAATTCCATGTCGGTGCAGGGGCTCCTaGGCAACCACCGCATCCAGG +
Preference number: 4 (lower is better)
Translates to: VHLQTMAKVKLVENKIPCRCRGS*ATTASR
Trigger: CCTGGATGCGGTGGTTGCCCAGGAGCCCCTGCACCG...ACATGGAATTTTATTTTCTACAAGTTTGACCTTAGCCATGGTTTGCAAGTGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp TCTGACAACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGGCACAATCTGCCAGTaGTGGAAGACAGACAGAGAA +
Preference number: 4 (lower is better)
Translates to: SDNTKATSYEVSASSTGVGTICQ*WKTDRE
Trigger: TTCTCTGTCTGTCTTCCACCACTGGCAGATTGTGCC...AACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTTGTCAGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp GACAACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGTGAGTTGTTCAAGATaGCAACAGCAGCTTCCAGAC +
Preference number: 4 (lower is better)
Translates to: DNTKATSYEVSASSTGVAVSCSR*QQQLPD
Trigger: GTCTGGAAGCTGCTGTTGCCATCTTGAACAACTCAC...TGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTTGTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp GCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGGAGTCATCAGAATCAAGCTCTaGTCCAATATAATTCCCAAA +
Preference number: 4 (lower is better)
Translates to: ASSTGVAAHCREQELPGVIRIKL*SNIIPK
Trigger: TTTGGGAATTATATTGGACCAGAGCTTGATTCTGAT...GACTCCTGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp GAGCAAGACAGAGGTCAGAATGTTCTGTTCACTTGCAAACCATGGCTAAGGTCAACTGGGGCTCTGGGTTaGAGGTTGGTGAGTTGTTCA +
Preference number: 4 (lower is better)
Translates to: EQDRGQNVLFTCKPWLRSTGALG*RLVSCS
Trigger: TGAACAACTCACCAACCTCCAACCCAGAGCCCCAGT...TGACCTTAGCCATGGTTTGCAAGTGAACAGAACATTCTGACCTCTGTCTTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426333.7
ENST00000592576.5
CDS-3UTR CCA 90 bp GTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACTCTCTGACAACAGATGGCACAGGATGCTaGAGAGAAGTAGGACTCCTA +
Preference number: 4 (lower is better)
Translates to: VGELFKMATAASRHSLTTDGTGC*REVGLL
Trigger: TAGGAGTCCTACTTCTCTCCAGCATCCTGTGCCATC...TGTTGTCAGAGAGTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426333.7
3UTR CAA 72 bp TGTAACATGACAATAACCACCCCTGGCCTGCCTACCTaGCAGGCTGCTGTGAGGTTTCTCAGATACACAATA +
Preference number: 4 (lower is better)
Translates to: CNMTITTPGLPT*QAAVRFLRYTI
Trigger: TATTGTGTATCTGAGAAACCTCACAGCAGCCTGCAAGGTAGGCAGGCCAGGGGTGGTTATTGTCATGTTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426333.7
CDS-3UTR TCA 90 bp GCCAAGAAATCCATCTCATACACCGTAACAGGTAATGTCTGCTCCATCAGAGTGTGCGCAAGCCAGCTGTaGCCTCATCAGAGAAATTCA +
Preference number: 4 (lower is better)
Translates to: AKKSISYTVTGNVCSIRVCASQL*PHQRNS
Trigger: TGAATTTCTCTGATGAGGTCACAGCTGGCTTGCGCA...CACTCTGATGGAGCAGACATTACCTGTTACGGTGTATGAGATGGATTTCTTGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588374.1
CDS-3UTR TCA 90 bp TTGGGAGATGACATATATTCAGAATGTAAGCACCAGACGGGGCAGGGGAGACGATGTCCACAAAGCCTGTaGACTCGCCAAAGAACTTTT +
Preference number: 4 (lower is better)
Translates to: LGDDIYSECKHQTGQGRRCPQSL*TRQRTF
Trigger: AAAAGTTCTTTGGCGAGTTCACAGGCTTTGTGGACA...TCGTCTCCCCTGCCCCGTCTGGTGCTTACATTCTGAATATATGTCATCTCCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426333.7
CDS-3UTR TCA 90 bp GACAGAGGTCAGAATGTTCTGTTCACTTGCAAACCATGGCTAAGGTCAAACTTGATAAGTCGGTATCCATaGTGCTCTCGCCTGCTCAGC +
Preference number: 4 (lower is better)
Translates to: DRGQNVLFTCKPWLRSNLISRYP*CSRLLS
Trigger: GCTGAGCAGGCGAGAGCATCATGGATACCGACTTAT...CAAGTTTGACCTTAGCCATGGTTTGCAAGTGAACAGAACATTCTGACCTCTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426333.7
ENST00000592576.5
CDS-3UTR TCA 90 bp GACAACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGGCCCCTTCCAGATCTaGCGCTTTTTAATTTCCTAT +
Preference number: 4 (lower is better)
Translates to: DNTKATSYEVSASSTGVAGPFQI*RFLISY
Trigger: ATAGGAAATTAAAAAGCGTCAGATCTGGAAGGGGCC...TGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTTGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591382.5
CDS-3UTR GCA 90 bp TCTGACAACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTCCTACACCTCTCTCTTaGTCTGTGAAGAGGATGTCA +
Preference number: 4 (lower is better)
Translates to: SDNTKATSYEVSASSTGVPTPLS*SVKRMS
Trigger: TGACATCCTCTTCACAGAGCAAGAGAGAGGTGTAGG...AACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTTGTCAGA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR GCA 90 bp AGGTCAGAATGTTCTGTTCACTTGCAAACCATGGCTAAGGTCAAACTTGTAGAACTCTCCTGCACCGCATaGTTGATCAGCCGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: RSECSVHLQTMAKVKLVELSCTA*LISRSV
Trigger: CACAGAGCGGCTGATCAAGCATGCGGTGCAGGAGAG...TTCTACAAGTTTGACCTTAGCCATGGTTTGCAAGTGAACAGAACATTCTGACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426333.7
ENST00000592576.5
CDS-3UTR GCA 90 bp AGGTCAGAATGTTCTGTTCACTTGCAAACCATGGCTAAGGTCAAACTTGTAGAACCTTCGTCAGGTGGATaGCAAGCTCGTCTAGGGTCC +
Preference number: 4 (lower is better)
Translates to: RSECSVHLQTMAKVKLVEPSSGG*QARLGS
Trigger: GGACCCTAGACGAGCTTGGCATCCACCTGACGAAGG...TTCTACAAGTTTGACCTTAGCCATGGTTTGCAAGTGAACAGAACATTCTGACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426333.7
ENST00000592576.5
CDS-3UTR GCA 90 bp GAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACTCTCTGACAACACGAAGGTTTGGAGAAGGGATATaGTGCACACACATGTCCACA +
Preference number: 4 (lower is better)
Translates to: ELFKMATAASRHSLTTRRFGEGI*CTHMST
Trigger: TGTGGACATGTGTGTGCAGCATATCCCTTCTCCAAA...CCTTCGTGTTGTCAGAGAGTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR GCA 90 bp GAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACTCTCTGACAACACGAAGGGGAAACCTTGAACGATaGTGTCCTTCACTGAACCAA +
Preference number: 4 (lower is better)
Translates to: ELFKMATAASRHSLTTRRGNLER*CPSLNQ
Trigger: TTGGTTCAGTGAAGGACAGCATCGTTCAAGGTTTCC...CCTTCGTGTTGTCAGAGAGTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp GACAACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAAAACATGTCTTGCCATaGTGGAGATGTCCACAAAGG +
Preference number: 4 (lower is better)
Translates to: DNTKATSYEVSASSTGVAKHVLP*WRCPQR
Trigger: CCTTTGTGGACATCTCCACCATGGCAAGACATGTTT...TGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
CDS-3UTR CCA 90 bp GAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACTCTCTGACAACACGAAGGAAACATGTCTTGCCATaGTGGAGATGTCCACAAAGG +
Preference number: 4 (lower is better)
Translates to: ELFKMATAASRHSLTTRRKHVLP*WRCPQR
Trigger: CCTTTGTGGACATCTCCACCATGGCAAGACATGTTT...CCTTCGTGTTGTCAGAGAGTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
CDS-3UTR CCA 90 bp GAGCAAGACAGAGGTCAGAATGTTCTGTTCACTTGCAAACCATGGCTAAGGTCACTGGGAGCTGCTAGTTaGGGCCTTTTTGGTGAACTT +
Preference number: 4 (lower is better)
Translates to: EQDRGQNVLFTCKPWLRSLGAAS*GLFGEL
Trigger: AAGTTCACCAAAAAGGCCCCAACTAGCAGCTCCCAG...TGACCTTAGCCATGGTTTGCAAGTGAACAGAACATTCTGACCTCTGTCTTGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426333.7
ENST00000592576.5
CDS-3UTR CCA 90 bp TCTGACAACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTTACATCTTAGTAGTGTaGCACATCAGGGGGCCATCA +
Preference number: 4 (lower is better)
Translates to: SDNTKATSYEVSASSTGVYILVV*HIRGPS
Trigger: TGATGGCCCCCTGATGTGCCACACTACTAAGATGTA...AACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTTGTCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp AGCAACATAGGATCATCGAAGAATTTGCTGATGCTCACATCTTCACTGAGGCCCGGCACAATCTGCCAGTaGTGGAAGACAGACAGAGAA +
Preference number: 4 (lower is better)
Translates to: SNIGSSKNLLMLTSSLRPGTICQ*WKTDRE
Trigger: TTCTCTGTCTGTCTTCCACCACTGGCAGATTGTGCC...GGGCCTCAGTGAAGATGTGAGCATCAGCAAATTCTTCGATGATCCTATGTTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589769.1
CDS-3UTR CCA 90 bp GTGAACTGTCAGATAAGTGGTTTCCCCAGGTTGTGTGGTCAGATGCTTGAAGCAGTGAGTTGTTCAAGATaGCAACAGCAGCTTCCAGAC +
Preference number: 4 (lower is better)
Translates to: VNCQISGFPRLCGQMLEAVSCSR*QQQLPD
Trigger: GTCTGGAAGCTGCTGTTGCCATCTTGAACAACTCAC...TGCTTCAAGCATCTGACCACACAACCTGGGGAAACCACTTATCTGACAGTTCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426333.7
CDS-3UTR CCA 90 bp TCTGACAACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTATTACGTCAAGAGGATaGCACAGGATGCTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: SDNTKATSYEVSASSTGVITSRG*HRMLER
Trigger: TCTCTCCAGCATCCTGTGCCATCCTCTTGACGTAAT...AACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTTGTCAGA
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426333.7
CDS-3UTR TCA 90 bp CCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGTTTCTGATTTCCGGGTaGGTCTGTTCAATTAAACAA +
Preference number: 4 (lower is better)
Translates to: PRHMRSQLQVQELQPTVGFLISG*VCSIKQ
Trigger: TTGTTTAATTGAACAGACTCACCCGGAAATCAGAAA...CCCTACAGTGGGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
CDS-3UTR TCA 90 bp GGCTCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCAGATTTCTGATTTCCGGGTaGGTCTGTTCAATTAAACAA +
Preference number: 4 (lower is better)
Translates to: GSGLEVGELFKMATAASRFLISG*VCSIKQ
Trigger: TTGTTTAATTGAACAGACTCACCCGGAAATCAGAAA...TCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGAGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426333.7
ENST00000591382.5
CDS-3UTR TCA 90 bp GACAGAGGTCAGAATGTTCTGTTCACTTGCAAACCATGGCTAAGGTCAAACTTGTGCGCAAGCCAGCTGTaGCCTCATCAGAGAAATTCA +
Preference number: 4 (lower is better)
Translates to: DRGQNVLFTCKPWLRSNLCASQL*PHQRNS
Trigger: TGAATTTCTCTGATGAGGTCACAGCTGGCTTGCGCA...CAAGTTTGACCTTAGCCATGGTTTGCAAGTGAACAGAACATTCTGACCTCTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426333.7
ENST00000592576.5
CDS-3UTR TCA 90 bp ATCTCATACACCGTAACAGGTAATGTCTGCTCCATCAGAGTGAATTTCTTGGTTAAGGACCACTCCATCTaGGATGCGCAAGCCAGCTGT +
Preference number: 4 (lower is better)
Translates to: ISYTVTGNVCSIRVNFLVKDHSI*DAQASC
Trigger: ACAGCTGGCTTGCGCATCTCAGATGGAGTGGTCCTT...AACCAAGAAATTCACTCTGATGGAGCAGACATTACCTGTTACGGTGTATGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588374.1
CDS-3UTR TCA 90 bp ACAACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGTGCTTATTAATCCATTaGCCTCATCCACAATGTGGC +
Preference number: 4 (lower is better)
Translates to: TTRRPRHMRSQLQVQELQCLLIH*PHPQCG
Trigger: GCCACATTGTGGATGAGGTCAATGGATTAATAAGCA...CTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTTGT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp GAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACTCTCTGACAACACGAAGGCTTGATGTCTATCTCTaGGTACATCTTCCGCAAATC +
Preference number: 4 (lower is better)
Translates to: ELFKMATAASRHSLTTRRLDVYL*VHLPQI
Trigger: GATTTGCGGAAGATGTACTCAGAGATAGACATCAAG...CCTTCGTGTTGTCAGAGAGTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp CATAGGATCATCGAAGAATTTGCTGATGCTCACATCTTCACTGAGGCCCTTCCTCTCACATGGGGTAATTaGGCACAACATCCTGTTTGG +
Preference number: 4 (lower is better)
Translates to: HRIIEEFADAHIFTEALPLTWGN*AQHPVW
Trigger: CCAAACAGGATGTTGTGCTCAATTACCCCATGTGAG...AGGAAGGGCCTCAGTGAAGATGTGAGCATCAGCAAATTCTTCGATGATCCTATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589769.1
CDS-3UTR GCA 90 bp GTGAACTGTCAGATAAGTGGTTTCCCCAGGTTGTGTGGTCAGATGCTTGAAGCAGGAAACCTTGAACGATaGTGTCCTTCACTGAACCAA +
Preference number: 4 (lower is better)
Translates to: VNCQISGFPRLCGQMLEAGNLER*CPSLNQ
Trigger: TTGGTTCAGTGAAGGACAGCATCGTTCAAGGTTTCC...TGCTTCAAGCATCTGACCACACAACCTGGGGAAACCACTTATCTGACAGTTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426333.7
CDS-3UTR GCA 90 bp TCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACAATGTTCTGTTCACTTaGAAACCATGGCTAAGGTCA +
Preference number: 4 (lower is better)
Translates to: SGLEVGELFKMATAASRHNVLFT*KPWLRS
Trigger: TGACCTTAGCCATGGTTTGCAAGTGAACAGAACATT...GTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR GCA 90 bp AACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCAATGTTCTGTTCACTTaGAAACCATGGCTAAGGTCA +
Preference number: 4 (lower is better)
Translates to: NTKATSYEVSASSTGVAANVLFT*KPWLRS
Trigger: TGACCTTAGCCATGGTTTGCAAGTGAACAGAACATT...GGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp CTCACTGGGGCTCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGTTTCTTGGTTTTCACTaGCTTAATAATGGGTTCTGT +
Preference number: 4 (lower is better)
Translates to: LTGALGWRLVSCSRWQQQFLGFH*LNNGFC
Trigger: ACAGAACCCATTATTAAGCCAGTGAAAACCAAGAAA...CTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGAGCCCCAGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp GTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACTCTCTGACAACAAAACATGTCTTGCCATaGTGGAGATGTCCACAAAGG +
Preference number: 4 (lower is better)
Translates to: VGELFKMATAASRHSLTTKHVLP*WRCPQR
Trigger: CCTTTGTGGACATCTCCACCATGGCAAGACATGTTT...TGTTGTCAGAGAGTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
CDS-3UTR CCA 90 bp TACACCTCTCTCTTGCTCTGTGAAGAGGATGTCAGTATAGCACAGATCTTGGTCTTTTCCTTTGGTGTCTaGCAAGACCACTGTCACAGG +
Preference number: 4 (lower is better)
Translates to: YTSLLLCEEDVSIAQILVFSFGV*QDHCHR
Trigger: CCTGTGACAGTGGTCTTGCCAGACACCAAAGGAAAA...GACCAAGATCTGTGCTATACTGACATCCTCTTCACAGAGCAAGAGAGAGGTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588374.1
CDS-3UTR CCA 90 bp ACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACGAAATTCACATGTCCTaGAGTGTCCATGATATTGAA +
Preference number: 4 (lower is better)
Translates to: TKATSYEVSASSTGVAAHEIHMS*SVHDIE
Trigger: TTCAATATCATGGACACTCCAGGACATGTGAATTTC...GTGGGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp ACTGGGGCTCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTTGCTGTCTTCACAATTaGTTGATCAACACCTTCAAT +
Preference number: 4 (lower is better)
Translates to: TGALGWRLVSCSRWQQQLCCLHN*LINTFN
Trigger: ATTGAAGGTGTTGATCAACCAATTGTGAAGACAGCA...AAGCTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGAGCCCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp GTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACTCTCTGACAACACTGTTCCACGTAATCTaGACCACCTCATTCTCTATG +
Preference number: 4 (lower is better)
Translates to: VGELFKMATAASRHSLTTLFHVI*TTSFSM
Trigger: CATAGAGAATGAGGTGGTCCAGATTACGTGGAACAG...TGTTGTCAGAGAGTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAAC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp GTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACTCTCTGACAACAGGCAGTGAAGCCTCTTaGGAGATGACATATATTCAG +
Preference number: 4 (lower is better)
Translates to: VGELFKMATAASRHSLTTGSEAS*EMTYIQ
Trigger: CTGAATATATGTCATCTCCCAAGAGGCTTCACTGCC...TGTTGTCAGAGAGTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAAC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426333.7
CDS-3UTR CCA 90 bp TTTCGCCTAGCAAAGTGTCGTTCAAAATTCTGTTTCAGGTGCCACAGGTGGTTCTTCAGGTGCCACAGGTaGTTCATAGCTGAGAACTTC +
Preference number: 4 (lower is better)
Translates to: FRLAKCRSKFCFRCHRWFFRCHR*FIAENF
Trigger: GAAGTTCTCAGCTATGAACCACCTGTGGCACCTGAA...GAACCACCTGTGGCACCTGAAACAGAATTTTGAACGACACTTTGCTAGGCGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591856.1
3UTR CAA 72 bp ACGAAACTTCTCTGGGAGCTGCTAGTTGGGGCCTTTTaGGTGAACTTTCGCCTAGCAAAGTGTCGTTCAAAA +
Preference number: 4 (lower is better)
Translates to: TKLLWELLVGAF*VNFRLAKCRSK
Trigger: TTTTGAACGACACTTTGCTAGGCGAAAGTTCACCAAAAAGGCCCCAACTAGCAGCTCCCAGAGAAGTTTCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591856.1
CDS-3UTR GCA 90 bp GACAACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGTAACAGGTAATGTCTaGTCCATCAGAGTGAATTTC +
Preference number: 4 (lower is better)
Translates to: DNTKATSYEVSASSTGVAVTGNV*SIRVNF
Trigger: GAAATTCACTCTGATGGAGCAGACATTACCTGTTAC...TGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTTGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR GCA 90 bp TTGGGAGATGACATATATTCAGAATGTAAGCACCAGACGGGGCAGGGGAGACGAGTAACAGGTAATGTCTaGTCCATCAGAGTGAATTTC +
Preference number: 4 (lower is better)
Translates to: LGDDIYSECKHQTGQGRRVTGNV*SIRVNF
Trigger: GAAATTCACTCTGATGGAGCAGACATTACCTGTTAC...TCGTCTCCCCTGCCCCGTCTGGTGCTTACATTCTGAATATATGTCATCTCCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426333.7
CDS-3UTR GCA 90 bp ACCTCTCTCTTGCTCTGTGAAGAGGATGTCAGTATAGCACAGATCTTGGTCATACCACAAAACATGTCTTaGCATGGTGGAGATGTCCAC +
Preference number: 4 (lower is better)
Translates to: TSLLLCEEDVSIAQILVIPQNMS*HGGDVH
Trigger: GTGGACATCTCCACCATGGCAAGACATGTTTTGTGG...TATGACCAAGATCTGTGCTATACTGACATCCTCTTCACAGAGCAAGAGAGAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588374.1
CDS-3UTR GCA 90 bp AGCAACATAGGATCATCGAAGAATTTGCTGATGCTCACATCTTCACTGAGGCCCGGAAACCTTGAACGATaGTGTCCTTCACTGAACCAA +
Preference number: 4 (lower is better)
Translates to: SNIGSSKNLLMLTSSLRPGNLER*CPSLNQ
Trigger: TTGGTTCAGTGAAGGACAGCATCGTTCAAGGTTTCC...GGGCCTCAGTGAAGATGTGAGCATCAGCAAATTCTTCGATGATCCTATGTTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589769.1
CDS-3UTR CCA 90 bp TACACCTCTCTCTTGCTCTGTGAAGAGGATGTCAGTATAGCACAGATCTTGGTCAAACATGTCTTGCCATaGTGGAGATGTCCACAAAGG +
Preference number: 4 (lower is better)
Translates to: YTSLLLCEEDVSIAQILVKHVLP*WRCPQR
Trigger: CCTTTGTGGACATCTCCACCATGGCAAGACATGTTT...GACCAAGATCTGTGCTATACTGACATCCTCTTCACAGAGCAAGAGAGAGGTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588374.1
CDS-3UTR CCA 90 bp AGGTCAGAATGTTCTGTTCACTTGCAAACCATGGCTAAGGTCAAACTTGTAGAATGCTGTACTGGGAGCTaGAGAAGCAGACGTTACCCA +
Preference number: 4 (lower is better)
Translates to: RSECSVHLQTMAKVKLVECCTGS*RSRRYP
Trigger: TGGGTAACGTCTGCTTCTCCAGCTCCCAGTACAGCA...TTCTACAAGTTTGACCTTAGCCATGGTTTGCAAGTGAACAGAACATTCTGACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426333.7
ENST00000592576.5
CDS-3UTR GCA 90 bp TCTGACAACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGTAACAGGTAATGTCTaGTCCATCAGAGTGAATTTC +
Preference number: 4 (lower is better)
Translates to: SDNTKATSYEVSASSTGVVTGNV*SIRVNF
Trigger: GAAATTCACTCTGATGGAGCAGACATTACCTGTTAC...AACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTTGTCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp GACAACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGAAATTCACATGTCCTaGAGTGTCCATGATATTGAA +
Preference number: 4 (lower is better)
Translates to: DNTKATSYEVSASSTGVAEIHMS*SVHDIE
Trigger: TTCAATATCATGGACACTCCAGGACATGTGAATTTC...TGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp GTTCACTTGCAAACCATGGCTAAGGTCAAACTTGTAGAAAATAAAATTCCATGTGGCCAAAAGCCCAGATaGAACGGGCAGCCAGCAGAT +
Preference number: 4 (lower is better)
Translates to: VHLQTMAKVKLVENKIPCGQKPR*NGQPAD
Trigger: ATCTGCTGGCTGCCCGTTCCATCTGGGCTTTTGGCC...ACATGGAATTTTATTTTCTACAAGTTTGACCTTAGCCATGGTTTGCAAGTGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp GTTCACTTGCAAACCATGGCTAAGGTCAAACTTGTAGAAAATAAAATTCCATGTCATCCACCAGAATGTTaGGGCCAGTCGCATCAGGGC +
Preference number: 4 (lower is better)
Translates to: VHLQTMAKVKLVENKIPCHPPEC*GQSHQG
Trigger: GCCCTGATGCGACTGGCCCCAACATTCTGGTGGATG...ACATGGAATTTTATTTTCTACAAGTTTGACCTTAGCCATGGTTTGCAAGTGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp AGGTCAGAATGTTCTGTTCACTTGCAAACCATGGCTAAGGTCAAACTTGTAGAACTCTCTCTTGCTCTGTaGAGAGGATGTCAGTATAGC +
Preference number: 4 (lower is better)
Translates to: RSECSVHLQTMAKVKLVELSLAL*RGCQYS
Trigger: GCTATACTGACATCCTCTTCACAGAGCAAGAGAGAG...TTCTACAAGTTTGACCTTAGCCATGGTTTGCAAGTGAACAGAACATTCTGACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426333.7
ENST00000592576.5
CDS-3UTR TCA 90 bp GTTCACTTGCAAACCATGGCTAAGGTCAAACTTGTAGAAAATAAAATTCCATGTAAGGGTCGGAAAATCTaGGCCTCCTCATTGCCTCGG +
Preference number: 4 (lower is better)
Translates to: VHLQTMAKVKLVENKIPCKGRKI*ASSLPR
Trigger: CCGAGGCAATGAGGAGGCTCAGATTTTCCGACCCTT...ACATGGAATTTTATTTTCTACAAGTTTGACCTTAGCCATGGTTTGCAAGTGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp AGGTCAGAATGTTCTGTTCACTTGCAAACCATGGCTAAGGTCAAACTTGTAGAATTTCAGCAAAGCACTTaGGGGAGGATGTTTCCACCA +
Preference number: 4 (lower is better)
Translates to: RSECSVHLQTMAKVKLVEFQQST*GRMFPP
Trigger: TGGTGGAAACATCCTCCCTCAAGTGCTTTGCTGAAA...TTCTACAAGTTTGACCTTAGCCATGGTTTGCAAGTGAACAGAACATTCTGACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426333.7
ENST00000592576.5
CDS-3UTR GCA 90 bp GAGCAAGACAGAGGTCAGAATGTTCTGTTCACTTGCAAACCATGGCTAAGGTCAGTAACAGGTAATGTCTaGTCCATCAGAGTGAATTTC +
Preference number: 4 (lower is better)
Translates to: EQDRGQNVLFTCKPWLRSVTGNV*SIRVNF
Trigger: GAAATTCACTCTGATGGAGCAGACATTACCTGTTAC...TGACCTTAGCCATGGTTTGCAAGTGAACAGAACATTCTGACCTCTGTCTTGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426333.7
ENST00000592576.5
CDS-3UTR GCA 90 bp GTTCACTTGCAAACCATGGCTAAGGTCAAACTTGTAGAAAATAAAATTCCATGTTCTGAGCCTCCTCATTaGCTCGGGGTTCGGTTATGG +
Preference number: 4 (lower is better)
Translates to: VHLQTMAKVKLVENKIPCSEPPH*LGVRLW
Trigger: CCATAACCGAACCCCGAGGCAATGAGGAGGCTCAGA...ACATGGAATTTTATTTTCTACAAGTTTGACCTTAGCCATGGTTTGCAAGTGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR GCA 90 bp GTTCACTTGCAAACCATGGCTAAGGTCAAACTTGTAGAAAATAAAATTCCATGTAAGCAGGAGGCCAAATaGTCCTCTCTCACTGGGGCT +
Preference number: 4 (lower is better)
Translates to: VHLQTMAKVKLVENKIPCKQEAK*SSLTGA
Trigger: AGCCCCAGTGAGAGAGGAGCATTTGGCCTCCTGCTT...ACATGGAATTTTATTTTCTACAAGTTTGACCTTAGCCATGGTTTGCAAGTGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp ACAACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGTTTCTTGGTTTTCACTaGCTTAATAATGGGTTCTGT +
Preference number: 4 (lower is better)
Translates to: TTRRPRHMRSQLQVQELQFLGFH*LNNGFC
Trigger: ACAGAACCCATTATTAAGCCAGTGAAAACCAAGAAA...CTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp AGGTCAGAATGTTCTGTTCACTTGCAAACCATGGCTAAGGTCAAACTTGTAGAATTTTCCTTTGGTGTCTaGCAAGACCACTGTCACAGG +
Preference number: 4 (lower is better)
Translates to: RSECSVHLQTMAKVKLVEFSFGV*QDHCHR
Trigger: CCTGTGACAGTGGTCTTGCCAGACACCAAAGGAAAA...TTCTACAAGTTTGACCTTAGCCATGGTTTGCAAGTGAACAGAACATTCTGACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426333.7
ENST00000592576.5
CDS-3UTR CCA 90 bp TCTGACAACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGAAATTCACATGTCCTaGAGTGTCCATGATATTGAA +
Preference number: 4 (lower is better)
Translates to: SDNTKATSYEVSASSTGVEIHMS*SVHDIE
Trigger: TTCAATATCATGGACACTCCAGGACATGTGAATTTC...AACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTTGTCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp TCTGACAACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTTGCTGTCTTCACAATTaGTTGATCAACACCTTCAAT +
Preference number: 4 (lower is better)
Translates to: SDNTKATSYEVSASSTGVCCLHN*LINTFN
Trigger: ATTGAAGGTGTTGATCAACCAATTGTGAAGACAGCA...AACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTTGTCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp TTGGGAGATGACATATATTCAGAATGTAAGCACCAGACGGGGCAGGGGAGACGAATCAGAATCAAGCTCTaGTCCAATATAATTCCCAAA +
Preference number: 4 (lower is better)
Translates to: LGDDIYSECKHQTGQGRRIRIKL*SNIIPK
Trigger: TTTGGGAATTATATTGGACCAGAGCTTGATTCTGAT...TCGTCTCCCCTGCCCCGTCTGGTGCTTACATTCTGAATATATGTCATCTCCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426333.7
CDS-3UTR CCA 90 bp AGGTCAGAATGTTCTGTTCACTTGCAAACCATGGCTAAGGTCAAACTTGTAGAAGAACTGTCAGATAAGTaGTTTCCCCAGGTTGTGTGG +
Preference number: 4 (lower is better)
Translates to: RSECSVHLQTMAKVKLVEELSDK*FPQVVW
Trigger: CCACACAACCTGGGGAAACCACTTATCTGACAGTTC...TTCTACAAGTTTGACCTTAGCCATGGTTTGCAAGTGAACAGAACATTCTGACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426333.7
CDS-3UTR CCA 90 bp GTTCACTTGCAAACCATGGCTAAGGTCAAACTTGTAGAAAATAAAATTCCATGTATTTCCTATCCCACCTaGAGCAACCCTTCCGTGCCG +
Preference number: 4 (lower is better)
Translates to: VHLQTMAKVKLVENKIPCISYPT*SNPSVP
Trigger: CGGCACGGAAGGGTTGCTCCAGGTGGGATAGGAAAT...ACATGGAATTTTATTTTCTACAAGTTTGACCTTAGCCATGGTTTGCAAGTGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591382.5
CDS-3UTR CCA 90 bp ACTGTCACAGGAGTGCTTTTGATGCCTACACCTCTCTCTTGCTCTGTGAAGAGGTTTCTTGGTTTTCACTaGCTTAATAATGGGTTCTCA +
Preference number: 4 (lower is better)
Translates to: TVTGVLLMPTPLSCSVKRFLGFH*LNNGFS
Trigger: TGAGAACCCATTATTAAGCCAGTGAAAACCAAGAAA...CCTCTTCACAGAGCAAGAGAGAGGTGTAGGCATCAAAAGCACTCCTGTGACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588374.1
CDS-3UTR CCA 90 bp GTTCACTTGCAAACCATGGCTAAGGTCAAACTTGTAGAAAATAAAATTCCATGTCACCTCCTCGGCTGTTaGGTAGTACTTCTTGTCCTC +
Preference number: 4 (lower is better)
Translates to: VHLQTMAKVKLVENKIPCHLLGC*VVLLVL
Trigger: GAGGACAAGAAGTACTACCCAACAGCCGAGGAGGTG...ACATGGAATTTTATTTTCTACAAGTTTGACCTTAGCCATGGTTTGCAAGTGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp GTTCACTTGCAAACCATGGCTAAGGTCAAACTTGTAGAAAATAAAATTCCATGTTGCTGTACTGGGAGCTaGAGAAGCAGACGTTACCCA +
Preference number: 4 (lower is better)
Translates to: VHLQTMAKVKLVENKIPCCCTGS*RSRRYP
Trigger: TGGGTAACGTCTGCTTCTCCAGCTCCCAGTACAGCA...ACATGGAATTTTATTTTCTACAAGTTTGACCTTAGCCATGGTTTGCAAGTGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp TCTGACAACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTATCAGAATCAAGCTCTaGTCCAATATAATTCCCAAA +
Preference number: 4 (lower is better)
Translates to: SDNTKATSYEVSASSTGVIRIKL*SNIIPK
Trigger: TTTGGGAATTATATTGGACCAGAGCTTGATTCTGAT...AACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTTGTCAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp GTTCACTTGCAAACCATGGCTAAGGTCAAACTTGTAGAAAATAAAATTCCATGTTTCCTGAGGAGGTGGTaGGGTAGACTTCTGATCGCA +
Preference number: 4 (lower is better)
Translates to: VHLQTMAKVKLVENKIPCFLRRW*GRLLIA
Trigger: TGCGATCAGAAGTCTACCCCACCACCTCCTCAGGAA...ACATGGAATTTTATTTTCTACAAGTTTGACCTTAGCCATGGTTTGCAAGTGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426333.7
3UTR CAA 72 bp AGCAGAGCAAGACAGAGGTCAGAATGTTCTGTTCACTaGCAAACCATGGCTAAGGTCAAACTTGTAGAAAAT +
Preference number: 4 (lower is better)
Translates to: SRARQRSECSVH*QTMAKVKLVEN
Trigger: ATTTTCTACAAGTTTGACCTTAGCCATGGTTTGCAAGTGAACAGAACATTCTGACCTCTGTCTTGCTCTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426333.7
ENST00000592576.5
CDS-3UTR TCA 90 bp GTTCACTTGCAAACCATGGCTAAGGTCAAACTTGTAGAAAATAAAATTCCATGTATGGATAGCTCTTGTTaGCCTTGCGCAGGCCATCAA +
Preference number: 4 (lower is better)
Translates to: VHLQTMAKVKLVENKIPCMDSSC*PCAGHQ
Trigger: TTGATGGCCTGCGCAAGGTCAACAAGAGCTATCCAT...ACATGGAATTTTATTTTCTACAAGTTTGACCTTAGCCATGGTTTGCAAGTGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR GCA 90 bp GTTCACTTGCAAACCATGGCTAAGGTCAAACTTGTAGAAAATAAAATTCCATGTTACTTCTTGTCCTCATaGAGCACCACCTCCATCCCA +
Preference number: 4 (lower is better)
Translates to: VHLQTMAKVKLVENKIPCYFLSS*STTSIP
Trigger: TGGGATGGAGGTGGTGCTGCATGAGGACAAGAAGTA...ACATGGAATTTTATTTTCTACAAGTTTGACCTTAGCCATGGTTTGCAAGTGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR GCA 90 bp TTAAACAATCCACAAAACATGTCTTGCCATGGTGGAGATGTCCACAAAGGGTCAGTAACAGGTAATGTCTaGTCCATCAGAGTGAATTTC +
Preference number: 4 (lower is better)
Translates to: LNNPQNMSCHGGDVHKGSVTGNV*SIRVNF
Trigger: GAAATTCACTCTGATGGAGCAGACATTACCTGTTAC...TGACCCTTTGTGGACATCTCCACCATGGCAAGACATGTTTTGTGGATTGTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588374.1
CDS-3UTR TCA 90 bp GTTCACTTGCAAACCATGGCTAAGGTCAAACTTGTAGAAAATAAAATTCCATGTTCACAGGAGTGCTTTTaGTGCCTACACCTCTCTCTT +
Preference number: 4 (lower is better)
Translates to: VHLQTMAKVKLVENKIPCSQECF*CLHLSL
Trigger: AAGAGAGAGGTGTAGGCATCAAAAGCACTCCTGTGA...ACATGGAATTTTATTTTCTACAAGTTTGACCTTAGCCATGGTTTGCAAGTGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp ACCTCTCTCTTGCTCTGTGAAGAGGATGTCAGTATAGCACAGATCTTGGTCATAATCAGAATCAAGCTCTaGTCCAATATAATTCCCAAA +
Preference number: 4 (lower is better)
Translates to: TSLLLCEEDVSIAQILVIIRIKL*SNIIPK
Trigger: TTTGGGAATTATATTGGACCAGAGCTTGATTCTGAT...TATGACCAAGATCTGTGCTATACTGACATCCTCTTCACAGAGCAAGAGAGAGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588374.1
CDS-3UTR TCA 90 bp AGGTCAGAATGTTCTGTTCACTTGCAAACCATGGCTAAGGTCAAACTTGTAGAATTTCTGATTTCCGGGTaGGTCTGTTCAATTAAACAA +
Preference number: 4 (lower is better)
Translates to: RSECSVHLQTMAKVKLVEFLISG*VCSIKQ
Trigger: TTGTTTAATTGAACAGACTCACCCGGAAATCAGAAA...TTCTACAAGTTTGACCTTAGCCATGGTTTGCAAGTGAACAGAACATTCTGACCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426333.7
CDS-3UTR TCA 90 bp CATGATATTGAAGAGATAAGATTTTCCTTTGGTGTCTGGCAAGACCACTGTCACTTTCTGATTTCCGGGTaGGTCTGTTCAATTAAACAA +
Preference number: 4 (lower is better)
Translates to: HDIEEIRFSFGVWQDHCHFLISG*VCSIKQ
Trigger: TTGTTTAATTGAACAGACTCACCCGGAAATCAGAAA...GTGACAGTGGTCTTGCCAGACACCAAAGGAAAATCTTATCTCTTCAATATCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588374.1
CDS-3UTR TCA 90 bp GTTCACTTGCAAACCATGGCTAAGGTCAAACTTGTAGAAAATAAAATTCCATGTTGTCCACAAAGCCTGTaGACTCGCCAAAGAACTTTT +
Preference number: 4 (lower is better)
Translates to: VHLQTMAKVKLVENKIPCCPQSL*TRQRTF
Trigger: AAAAGTTCTTTGGCGAGTTCACAGGCTTTGTGGACA...ACATGGAATTTTATTTTCTACAAGTTTGACCTTAGCCATGGTTTGCAAGTGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR GCA 90 bp GTTCACTTGCAAACCATGGCTAAGGTCAAACTTGTAGAAAATAAAATTCCATGTTTTGGAGAAGGGATATaGTGCACACACATGTCCACA +
Preference number: 4 (lower is better)
Translates to: VHLQTMAKVKLVENKIPCFGEGI*CTHMST
Trigger: TGTGGACATGTGTGTGCAGCATATCCCTTCTCCAAA...ACATGGAATTTTATTTTCTACAAGTTTGACCTTAGCCATGGTTTGCAAGTGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CCA 90 bp ATCTCATACACCGTAACAGGTAATGTCTGCTCCATCAGAGTGAATTTCTTGGTTGAAATTCACATGTCCTaGAGTGTCCATGATATTGAA +
Preference number: 4 (lower is better)
Translates to: ISYTVTGNVCSIRVNFLVEIHMS*SVHDIE
Trigger: TTCAATATCATGGACACTCCAGGACATGTGAATTTC...AACCAAGAAATTCACTCTGATGGAGCAGACATTACCTGTTACGGTGTATGAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588374.1
CDS-3UTR CCA 90 bp AGGTCAGAATGTTCTGTTCACTTGCAAACCATGGCTAAGGTCAAACTTGTAGAATGCTGTCTTCACAATTaGTTGATCAACACCTTCAAT +
Preference number: 4 (lower is better)
Translates to: RSECSVHLQTMAKVKLVECCLHN*LINTFN
Trigger: ATTGAAGGTGTTGATCAACCAATTGTGAAGACAGCA...TTCTACAAGTTTGACCTTAGCCATGGTTTGCAAGTGAACAGAACATTCTGACCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426333.7
ENST00000592576.5
CDS-3UTR TCA 90 bp GTTCACTTGCAAACCATGGCTAAGGTCAAACTTGTAGAAAATAAAATTCCATGTTGCTTATTAATCCATTaGCCTCATCCACAATGTGGC +
Preference number: 4 (lower is better)
Translates to: VHLQTMAKVKLVENKIPCCLLIH*PHPQCG
Trigger: GCCACATTGTGGATGAGGTCAATGGATTAATAAGCA...ACATGGAATTTTATTTTCTACAAGTTTGACCTTAGCCATGGTTTGCAAGTGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR TCA 90 bp GTTCACTTGCAAACCATGGCTAAGGTCAAACTTGTAGAAAATAAAATTCCATGTGATACACAATACATGTaGAAGTGTTTCGTGAACTGT +
Preference number: 4 (lower is better)
Translates to: VHLQTMAKVKLVENKIPCDTQYM*KCFVNC
Trigger: ACAGTTCACGAAACACTTTCACATGTATTGTGTATC...ACATGGAATTTTATTTTCTACAAGTTTGACCTTAGCCATGGTTTGCAAGTGAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426333.7
CDS GCA 90 bp GCAAGGGGCGGATGTTCAGCTTCAGCTCCTCCTTCGTCAGGTGGATaGCAAGCTCGTCTAGGGTCCGTGGGAGGCTGGTGTCCACGTCAC +
Preference number: 5 (lower is better)
Translates to: ARGGCSASAPPSSGG*QARLGSVGGWCPRH
Trigger: GTGACGTGGACACCAGCCTCCCACGGACCCTAGACGAGCTTGGCATCCACCTGACGAAGGAGGAGCTGAAGCTGAACATCCGCCCCTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000585616.5
ENST00000585794.5
ENST00000586654.5
ENST00000590367.5
ENST00000591382.5
ENST00000592576.5
CDS CCA 90 bp CTGAGCAAGGGGCGGATGTTCAGCTTCAGCTCCTCCTTCGTCAGGTaGATGCCAAGCTCGTCTAGGGTCCGTGGGAGGCTGGTGTCCACG +
Preference number: 5 (lower is better)
Translates to: LSKGRMFSFSSSFVR*MPSSSRVRGRLVST
Trigger: CGTGGACACCAGCCTCCCACGGACCCTAGACGAGCTTGGCATCCACCTGACGAAGGAGGAGCTGAAGCTGAACATCCGCCCCTTGCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000585616.5
ENST00000585794.5
ENST00000586654.5
ENST00000590367.5
ENST00000591382.5
ENST00000592576.5
CDS GCA 90 bp ACTGAGGCTATAGAGGCAGCCCCGAAATCGAGGTGTGTGCGTGTGTaGGCGCTTCGGAAGCCTTGGGAAGGCACGAGGACGACAGGGTCT +
Preference number: 5 (lower is better)
Translates to: TEAIEAAPKSRCVRV*ALRKPWEGTRTTGS
Trigger: AGACCCTGTCGTCCTCGTGCCTTCCCAAGGCTTCCGAAGCGCGCACACACGCACACACCTCGATTTCGGGGCTGCCTCTATAGCCTCAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591382.5
CDS CCA 90 bp GAGCCCATCCCACTCATATGCCTGGCTGCAAGGACCCTCGAGGACTaGGGTGGGGGAGTGCTGGTGGACTTACATTCATCACAGAGGGGG +
Preference number: 5 (lower is better)
Translates to: EPIPLICLAARTLED*GGGVLVDLHSSQRG
Trigger: CCCCCTCTGTGATGAATGTAAGTCCACCAGCACTCCCCCACCCCAGTCCTCGAGGGTCCTTGCAGCCAGGCATATGAGTGGGATGGGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000586276.5
ENST00000590367.5
ENST00000590977.5
CDS GCA 90 bp GGAATACATGCTGAAACAGAGACAGTGGTGAACACAGTGCCAGGCTaGAGCAGCCCGGACGCACTGCCAAGGGGAAGGGCAGGAACTCGG +
Preference number: 5 (lower is better)
Translates to: GIHAETETVVNTVPG*SSPDALPRGRAGTR
Trigger: CCGAGTTCCTGCCCTTCCCCTTGGCAGTGCGTCCGGGCTGCTGCAGCCTGGCACTGTGTTCACCACTGTCTCTGTTTCAGCATGTATTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590367.5
CDS CCA 90 bp CGCCGAGGTCGGAGTCCACACCACCGGTGTAGGTGTGCTCAATCTTaGGCTTGGCGCCCACCTTTGGAGAAGGGATATGCTGCACACACA +
Preference number: 5 (lower is better)
Translates to: RRGRSPHHRCRCAQS*AWRPPLEKGYAAHT
Trigger: TGTGTGTGCAGCATATCCCTTCTCCAAAGGTGGGCGCCAAGCCCAAGATTGAGCACACCTACACCGGTGGTGTGGACTCCGACCTCGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000585616.5
ENST00000585794.5
ENST00000586654.5
ENST00000587914.1
ENST00000590367.5
ENST00000591382.5
ENST00000592576.5
CDS CCA 90 bp GCCCCGAAATCGAGGTGTGTGCGTGTGTGCGCGCTTCGGAAGCCTTaGGAAGGCACGAGGACGACAGGGTCTTCCATTCTTTTTCCCGCT +
Preference number: 5 (lower is better)
Translates to: APKSRCVRVCALRKP*EGTRTTGSSILFPA
Trigger: AGCGGGAAAAAGAATGGAAGACCCTGTCGTCCTCGTGCCTTCCCAAGGCTTCCGAAGCGCGCACACACGCACACACCTCGATTTCGGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591382.5
CDS-3UTR CAA 90 bp GCCCTTCCTACGGCGGGTTTTGATCATGAATTCCCGGGCCAGGTGAGGAGCTGGTCATCCACCAGAATGTaGGGGCCAGTCGCATCAGGG +
Preference number: 5 (lower is better)
Translates to: ALPTAGFDHEFPGQVRSWSSTRM*GPVASG
Trigger: CCCTGATGCGACTGGCCCCAACATTCTGGTGGATGA...CCAGCTCCTCACCTGGCCCGGGAATTCATGATCAAAACCCGCCGTAGGAAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589769.1
CDS-3UTR CAA 90 bp CAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGGAGTCCACGCGGATGACAATGCTCTaGTCCAGGGGATCACCAGGC +
Preference number: 5 (lower is better)
Translates to: QVQELQPTVGSRSSQESTRMTML*SRGSPG
Trigger: GCCTGGTGATCCCCTGGACAAGAGCATTGTCATCCG...CGTGGACTCCTGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS TCA 90 bp GAGACCCACTGGCGTGCACCCATGTCATTCTCAACCCACAGCATCTaGGTGAAGCTCTGCCCTGAAGCCCCAACATGGTCTGCTGCCCAG +
Preference number: 5 (lower is better)
Translates to: ETHWRAPMSFSTHSI*VKLCPEAPTWSAAQ
Trigger: CTGGGCAGCAGACCATGTTGGGGCTTCAGGGCAGAGCTTCACTCAGATGCTGTGGGTTGAGAATGACATGGGTGCACGCCAGTGGGTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588340.1
CDS GCA 90 bp CCTCGATGTGGTACCTGGCCACAGAGATCCAAAGGCGGCCCACGGTaGATATCTGGGAGTCTTCCTCATCCTCCAGGGTGTAGTTCTCCC +
Preference number: 5 (lower is better)
Translates to: PRCGTWPQRSKGGPR*ISGSLPHPPGCSSP
Trigger: GGGAGAACTACACCCTGGAGGATGAGGAAGACTCCCAGATATGCACCGTGGGCCGCCTTTGGATCTCTGTGGCCAGGTACCACATCGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000585616.5
ENST00000586276.5
ENST00000590367.5
ENST00000591382.5
ENST00000592576.5
CDS GCA 90 bp CCCCCTGCGCCTGGCCAGGACGGTATAAACTGCAGAGACGCAATCTaGAGGGGCCTGGACCTCTACAAAGTAGTAAGGCTCCATCAGACG +
Preference number: 5 (lower is better)
Translates to: PPAPGQDGINCRDAI*RGLDLYKVVRLHQT
Trigger: CGTCTGATGGAGCCTTACTACTTTGTAGAGGTCCAGGCCCCTGCAGATTGCGTCTCTGCAGTTTATACCGTCCTGGCCAGGCGCAGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000586276.5
ENST00000590367.5
ENST00000591382.5
ENST00000592576.5
CDS CCA 90 bp GGGTGTAGTTCTCCCCCAGTACCTTCACAGGCTGCCCAGCATGAATaGTGCCACTCAGCACCCGGCCAAAGGCGTGAAACTGGACTCCAT +
Preference number: 5 (lower is better)
Translates to: GCSSPPVPSQAAQHE*CHSAPGQRRETGLH
Trigger: ATGGAGTCCAGTTTCACGCCTTTGGCCGGGTGCTGAGTGGCACCATTCATGCTGGGCAGCCTGTGAAGGTACTGGGGGAGAACTACACCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000585616.5
ENST00000585794.5
ENST00000586276.5
ENST00000587914.1
ENST00000590367.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp TCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGGAGTCCACGCTTGGCGCCCACCTTaGGAGAAGGGATATGCTGCA +
Preference number: 5 (lower is better)
Translates to: SSTGVAAHCREQELPGVHAWRPP*EKGYAA
Trigger: TGCAGCATATCCCTTCTCCAAAGGTGGGCGCCAAGC...GTGGACTCCTGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp TCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGGAGTCCACTCATCCACCAGAATGTaGGGGCCAGTCGCATCAGGG +
Preference number: 5 (lower is better)
Translates to: SSTGVAAHCREQELPGVHSSTRM*GPVASG
Trigger: CCCTGATGCGACTGGCCCCAACATTCTGGTGGATGA...GTGGACTCCTGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp CAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGGAGTCCACGGAACCAAGAAGAGCCTaGTCCACCTCAGAGGGCAGA +
Preference number: 5 (lower is better)
Translates to: QVQELQPTVGSRSSQESTEPRRA*STSEGR
Trigger: TCTGCCCTCTGAGGTGGACAAGGCTCTTCTTGGTTC...CGTGGACTCCTGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp TCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGGAGTCCACCACTGGGGCTCTGGGTaGGAGGTTGGTGAGTTGTTC +
Preference number: 5 (lower is better)
Translates to: SSTGVAAHCREQELPGVHHWGSG*EVGELF
Trigger: GAACAACTCACCAACCTCCAACCCAGAGCCCCAGTG...GTGGACTCCTGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp GCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGGAGTCGCTCCTCTCTTTTCCTaGGGAATGGAGCCCGGCAGA +
Preference number: 5 (lower is better)
Translates to: ASSTGVAAHCREQELPGVAPLFS*GMEPGR
Trigger: TCTGCCGGGCTCCATTCCCAAGGAAAAGAGAGGAGC...GACTCCTGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp GCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGGAGTCGGCAATAATGGGGCCTaGGCGCTCATGGGAACACTG +
Preference number: 5 (lower is better)
Translates to: ASSTGVAAHCREQELPGVGNNGA*ALMGTL
Trigger: CAGTGTTCCCATGAGCGCCAAGGCCCCATTATTGCC...GACTCCTGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426333.7
CDS TCA 90 bp CCCACTGGCGTGCACCCATGTCATTCTCAACCCACAGCATCTGAGTaGAGCTCTGCCCTGAAGCCCCAACATGGTCTGCTGCCCAGGAAA +
Preference number: 5 (lower is better)
Translates to: PTGVHPCHSQPTASE*SSALKPQHGLLPRK
Trigger: TTTCCTGGGCAGCAGACCATGTTGGGGCTTCAGGGCAGAGCTTCACTCAGATGCTGTGGGTTGAGAATGACATGGGTGCACGCCAGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588340.1
CDS GCA 90 bp GATCTCCTACGTCATCGTCGTCGTCATCATCATCCATCTCTCGCCTaGTCAGCTAAGAGTTCCCAGGCCGCTGCCGGAGATCGTGCTTCC +
Preference number: 5 (lower is better)
Translates to: DLLRHRRRHHHPSLA*SAKSSQAAAGDRAS
Trigger: GGAAGCACGATCTCCGGCAGCGGCCTGGGAACTCTTAGCTGAGCAGGCGAGAGATGGATGATGATGACGACGACGATGACGTAGGAGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402521.7
CDS GCA 90 bp AGCCGGTCAATCTTGTTGATGCACACAGTGACTGCCAGCCTCTCCTaGACCGCATGCTTGATCAGCCGCTCTGTGTTCAGCATCACCCCC +
Preference number: 5 (lower is better)
Translates to: SRSILLMHTVTASLS*TACLISRSVFSITP
Trigger: GGGGGTGATGCTGAACACAGAGCGGCTGATCAAGCATGCGGTGCAGGAGAGGCTGGCAGTCACTGTGTGCATCAACAAGATTGACCGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000587957.1
ENST00000591382.5
ENST00000592576.5
ENST00000593200.5
CDS GCA 90 bp CACAGAGGGGGCCCTCCCTGGTTCCCCACTGGAAACCTTGAACGATaGTGTCCTTCACTGAACCAAGAAGAGCCTTGTCCACCTCAGAGG +
Preference number: 5 (lower is better)
Translates to: HRGGPPWFPTGNLER*CPSLNQEEPCPPQR
Trigger: CCTCTGAGGTGGACAAGGCTCTTCTTGGTTCAGTGAAGGACAGCATCGTTCAAGGTTTCCAGTGGGGAACCAGGGAGGGCCCCCTCTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000586276.5
ENST00000589769.1
ENST00000590124.5
ENST00000590367.5
ENST00000590977.5
ENST00000591382.5
ENST00000592576.5
CDS GCA 90 bp ATCCTGAGTCACGTGCCCCCTGCGCCTGGCCAGGACGGTATAAACTaGAGAGACGCAATCTGCAGGGGCCTGGACCTCTACAAAGTAGTA +
Preference number: 5 (lower is better)
Translates to: ILSHVPPAPGQDGIN*RDAICRGLDLYKVV
Trigger: TACTACTTTGTAGAGGTCCAGGCCCCTGCAGATTGCGTCTCTGCAGTTTATACCGTCCTGGCCAGGCGCAGGGGGCACGTGACTCAGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000586276.5
ENST00000590367.5
ENST00000591382.5
ENST00000592576.5
CDS GCA 90 bp GGCCCAGGACTTGGGATGGTCCTGTGTACCCCAAGCTGCTTCTCCTaGCGAATCCTAAAGATGGTGAGCCCATCCCACTCATATGCCTGG +
Preference number: 5 (lower is better)
Translates to: GPGLGMVLCTPSCFS*RILKMVSPSHSYAW
Trigger: CCAGGCATATGAGTGGGATGGGCTCACCATCTTTAGGATTCGGCAGGAGAAGCAGCTTGGGGTACACAGGACCATCCCAAGTCCTGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586276.5
ENST00000590367.5
ENST00000590977.5
CDS CCA 90 bp GGTCGGAGTCCACACCACCGGTGTAGGTGTGCTCAATCTTGGGCTTaGCGCCCACCTTTGGAGAAGGGATATGCTGCACACACATGTCCA +
Preference number: 5 (lower is better)
Translates to: GRSPHHRCRCAQSWA*RPPLEKGYAAHTCP
Trigger: TGGACATGTGTGTGCAGCATATCCCTTCTCCAAAGGTGGGCGCCAAGCCCAAGATTGAGCACACCTACACCGGTGGTGTGGACTCCGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000585616.5
ENST00000585794.5
ENST00000586654.5
ENST00000587914.1
ENST00000590367.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp GCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGGAGTCAGACAGAGAAAAGGCTaGTCCCTGGGTGTGAGTCCG +
Preference number: 5 (lower is better)
Translates to: ASSTGVAAHCREQELPGVRQRKG*SLGVSP
Trigger: CGGACTCACACCCAGGGACAAGCCTTTTCTCTGTCT...GACTCCTGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp TCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGGAGTCCACCTTCAAGTACAGGAGTaGCAGCCCACTGTAGGGAGC +
Preference number: 5 (lower is better)
Translates to: SSTGVAAHCREQELPGVHLQVQE*QPTVGS
Trigger: GCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAG...GTGGACTCCTGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp GCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGGAGTCCTTCAAGTACAGGAGTaGCAGCCCACTGTAGGGAGC +
Preference number: 5 (lower is better)
Translates to: ASSTGVAAHCREQELPGVLQVQE*QPTVGS
Trigger: GCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAG...GACTCCTGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS GCA 90 bp ATCTTGTTGATGCACACAGTGACTGCCAGCCTCTCCTGCACCGCATaGTTGATCAGCCGCTCTGTGTTCAGCATCACCCCCTCAGCAGCA +
Preference number: 5 (lower is better)
Translates to: ILLMHTVTASLSCTA*LISRSVFSITPSAA
Trigger: TGCTGCTGAGGGGGTGATGCTGAACACAGAGCGGCTGATCAAGCATGCGGTGCAGGAGAGGCTGGCAGTCACTGTGTGCATCAACAAGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000587957.1
ENST00000591382.5
ENST00000592576.5
ENST00000593200.5
CDS GCA 90 bp CAGCTCCAGGATCAGCCGGTCAATCTTGTTGATGCACACAGTGACTaGCAGCCTCTCCTGCACCGCATGCTTGATCAGCCGCTCTGTGTT +
Preference number: 5 (lower is better)
Translates to: QLQDQPVNLVDAHSD*QPLLHRMLDQPLCV
Trigger: AACACAGAGCGGCTGATCAAGCATGCGGTGCAGGAGAGGCTGGCAGTCACTGTGTGCATCAACAAGATTGACCGGCTGATCCTGGAGCTG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000587957.1
ENST00000591382.5
ENST00000592576.5
ENST00000593200.5
CDS GCA 90 bp TGTAGTTCTCCCCCAGTACCTTCACAGGCTGCCCAGCATGAATGGTaGCACTCAGCACCCGGCCAAAGGCGTGAAACTGGACTCCATCAT +
Preference number: 5 (lower is better)
Translates to: CSSPPVPSQAAQHEW*HSAPGQRRETGLHH
Trigger: ATGATGGAGTCCAGTTTCACGCCTTTGGCCGGGTGCTGAGTGGCACCATTCATGCTGGGCAGCCTGTGAAGGTACTGGGGGAGAACTACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000585616.5
ENST00000585794.5
ENST00000586276.5
ENST00000587914.1
ENST00000590367.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp TGGGGCTCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCTCCTGCACCGCATGCTaGATCAGCCGCTCTGTGTTC +
Preference number: 5 (lower is better)
Translates to: WGSGLEVGELFKMATAASSCTAC*ISRSVF
Trigger: GAACACAGAGCGGCTGATCAAGCATGCGGTGCAGGA...GGAAGCTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGAGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp CAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGGAGTCCACGAGATCCCAATCGTACTaGGTCTGGAAGAACTCTCCC +
Preference number: 5 (lower is better)
Translates to: QVQELQPTVGSRSSQESTRSQSY*VWKNSP
Trigger: GGGAGAGTTCTTCCAGACCAAGTACGATTGGGATCT...CGTGGACTCCTGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp TCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGGAGTCCACTCCCCACTGGAAACCTaGAACGATGCTGTCCTTCAC +
Preference number: 5 (lower is better)
Translates to: SSTGVAAHCREQELPGVHSPLET*NDAVLH
Trigger: GTGAAGGACAGCATCGTTCAAGGTTTCCAGTGGGGA...GTGGACTCCTGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp GCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGGAGTCGCCGGGATAAAAGCTTaGATGGTGTACAGAGGGGAG +
Preference number: 5 (lower is better)
Translates to: ASSTGVAAHCREQELPGVAGIKA*MVYRGE
Trigger: CTCCCCTCTGTACACCATCAAAGCTTTTATCCCGGC...GACTCCTGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp TCCTCTCTCACTGGGGCTCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACCTGGCCTGCCTACCTaGCAGGCTGCTGTGAGGTTT +
Preference number: 5 (lower is better)
Translates to: SSLTGALGWRLVSCSRWQPGLPT*QAAVRF
Trigger: AAACCTCACAGCAGCCTGCAAGGTAGGCAGGCCAGG...TTGCCATCTTGAACAACTCACCAACCTCCAACCCAGAGCCCCAGTGAGAGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426333.7
CDS TCA 90 bp ATCAGGTTCTCATCAGTGGAATACATGCTGAAACAGAGACAGTGGTaGACACAGTGCCAGGCTGCAGCAGCCCGGACGCACTGCCAAGGG +
Preference number: 5 (lower is better)
Translates to: IRFSSVEYMLKQRQW*TQCQAAAARTHCQG
Trigger: CCCTTGGCAGTGCGTCCGGGCTGCTGCAGCCTGGCACTGTGTTCACCACTGTCTCTGTTTCAGCATGTATTCCACTGATGAGAACCTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590367.5
CDS TCA 90 bp CATTCATCACAGAGGGGGCCCTCCCTGGTTCCCCACTGGAAACCTTaGACGATGCTGTCCTTCACTGAACCAAGAAGAGCCTTGTCCACC +
Preference number: 5 (lower is better)
Translates to: HSSQRGPSLVPHWKP*TMLSFTEPRRALST
Trigger: GGTGGACAAGGCTCTTCTTGGTTCAGTGAAGGACAGCATCGTTCAAGGTTTCCAGTGGGGAACCAGGGAGGGCCCCCTCTGTGATGAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000586276.5
ENST00000590367.5
ENST00000590977.5
CDS CCA 90 bp GCCCAGATGGAACGGGCAGCCAGCAGATCCCAATCGTACTTGGTCTaGAAGAACTCTCCCAGCTTCTTCCTGTTCCACGTAATCTGGACC +
Preference number: 5 (lower is better)
Translates to: AQMERAASRSQSYLV*KNSPSFFLFHVIWT
Trigger: GGTCCAGATTACGTGGAACAGGAAGAAGCTGGGAGAGTTCTTCCAGACCAAGTACGATTGGGATCTGCTGGCTGCCCGTTCCATCTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000586276.5
ENST00000590124.5
ENST00000590367.5
ENST00000590977.5
ENST00000591382.5
ENST00000592576.5
CDS CCA 90 bp ACCACCGGTGTAGGTGTGCTCAATCTTGGGCTTGGCGCCCACCTTTaGAGAAGGGATATGCTGCACACACATGTCCACAAAGCCTGTGGA +
Preference number: 5 (lower is better)
Translates to: TTGVGVLNLGLGAHL*RRDMLHTHVHKACG
Trigger: TCCACAGGCTTTGTGGACATGTGTGTGCAGCATATCCCTTCTCCAAAGGTGGGCGCCAAGCCCAAGATTGAGCACACCTACACCGGTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587914.1
CDS CCA 90 bp TCATCTGTGCTGTACATCTTAGTAGTGTGGCACATCAGGGGGCCCTaGAAGAGGGGACAGGGTGCAGCTTCAACCACATCTATGCTCCGG +
Preference number: 5 (lower is better)
Translates to: SSVLYILVVWHIRGP*KRGQGAASTTSMLR
Trigger: CCGGAGCATAGATGTGGTTGAAGCTGCACCCTGTCCCCTCTTCCAGGGCCCCCTGATGTGCCACACTACTAAGATGTACAGCACAGATGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586276.5
CDS CCA 90 bp GCTTCCCGCTACAATGCAGGAGCTCAGAGGACTTCGGAGGGAACTTaGCAAAGAACGGCTGAAAGCGGCACGGATAGAAGAGGAAGTGAG +
Preference number: 5 (lower is better)
Translates to: ASRYNAGAQRTSEGT*QRTAESGTDRRGSE
Trigger: CTCACTTCCTCTTCTATCCGTGCCGCTTTCAGCCGTTCTTTGCCAAGTTCCCTCCGAAGTCCTCTGAGCTCCTGCATTGTAGCGGGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591382.5
CDS-3UTR CAA 90 bp CAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGGAGTCCACGTCCACAAAACATGTCTaGCCATGGTGGAGATGTCCA +
Preference number: 5 (lower is better)
Translates to: QVQELQPTVGSRSSQESTSTKHV*PWWRCP
Trigger: TGGACATCTCCACCATGGCAAGACATGTTTTGTGGA...CGTGGACTCCTGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
CDS-3UTR CAA 90 bp GGCTCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCAGATCCTGCACCGCATGCTaGATCAGCCGCTCTGTGTTC +
Preference number: 5 (lower is better)
Translates to: GSGLEVGELFKMATAASRSCTAC*ISRSVF
Trigger: GAACACAGAGCGGCTGATCAAGCATGCGGTGCAGGA...TCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp ACTGGGGCTCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTTCCTGCACCGCATGCTaGATCAGCCGCTCTGTGTTC +
Preference number: 5 (lower is better)
Translates to: TGALGWRLVSCSRWQQQLSCTAC*ISRSVF
Trigger: GAACACAGAGCGGCTGATCAAGCATGCGGTGCAGGA...AAGCTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGAGCCCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp CCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGGCTTGGCGCCCACCTTaGGAGAAGGGATATGCTGCA +
Preference number: 5 (lower is better)
Translates to: PRHMRSQLQVQELQPTVGAWRPP*EKGYAA
Trigger: TGCAGCATATCCCTTCTCCAAAGGTGGGCGCCAAGC...CCCTACAGTGGGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp GTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCATCAATCAGAACCCAGTaGCCAGCAGGAACACGGTTC +
Preference number: 5 (lower is better)
Translates to: VSASSTGVAAHCREQELPSIRTQ*PAGTRF
Trigger: GAACCGTGTTCCTGCTGGCAACTGGGTTCTGATTGA...TGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAGCTGAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp ACTGGGGCTCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTAGGCCATCAAGCATCTaGGGCAGCTCTGAGGGGTTG +
Preference number: 5 (lower is better)
Translates to: TGALGWRLVSCSRWQQQLRPSSI*GSSEGL
Trigger: CAACCCCTCAGAGCTGCCCAAGATGCTTGATGGCCT...AAGCTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGAGCCCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp GCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGGAGTCAGATCCCAATCGTACTaGGTCTGGAAGAACTCTCCC +
Preference number: 5 (lower is better)
Translates to: ASSTGVAAHCREQELPGVRSQSY*VWKNSP
Trigger: GGGAGAGTTCTTCCAGACCAAGTACGATTGGGATCT...GACTCCTGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp ACTGGGGCTCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTTCATCCACCAGAATGTaGGGGCCAGTCGCATCAGGG +
Preference number: 5 (lower is better)
Translates to: TGALGWRLVSCSRWQQQLSSTRM*GPVASG
Trigger: CCCTGATGCGACTGGCCCCAACATTCTGGTGGATGA...AAGCTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGAGCCCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp CTCCAAGGGGCGGATGACAATGCTCTTGTCCAGGGGATCACCAGGCACAATCTGTCCCCACTGGAAACCTaGAACGATGCTGTCCTTCAC +
Preference number: 5 (lower is better)
Translates to: LQGADDNALVQGITRHNLSPLET*NDAVLH
Trigger: GTGAAGGACAGCATCGTTCAAGGTTTCCAGTGGGGA...CAGATTGTGCCTGGTGATCCCCTGGACAAGAGCATTGTCATCCGCCCCTTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000589769.1
CDS-3UTR CAA 90 bp CATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGCGGATGACAATGCTCTaGTCCAGGGGATCACCAGGC +
Preference number: 5 (lower is better)
Translates to: HMRSQLQVQELQPTVGSRRMTML*SRGSPG
Trigger: GCCTGGTGATCCCCTGGACAAGAGCATTGTCATCCG...CCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp TTCACTGGGGGAGAACAGAGTAAGGGACTGGTGGTAGCTGGGGAGAGGACTTGGGCTCTGGGTTGGAGGTaGGTGAGTTGTTCAAGATGG +
Preference number: 5 (lower is better)
Translates to: FTGGEQSKGLVVAGERTWALGWR*VSCSRW
Trigger: CCATCTTGAACAACTCACCAACCTCCAACCCAGAGC...CCAAGTCCTCTCCCCAGCTACCACCAGTCCCTTACTCTGTTCTCCCCCAGTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426333.7
CDS-3UTR CAA 90 bp GGCTCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACTGGGGCTCTGGGTaGGAGGTTGGTGAGTTGTTC +
Preference number: 5 (lower is better)
Translates to: GSGLEVGELFKMATAASRHWGSG*EVGELF
Trigger: GAACAACTCACCAACCTCCAACCCAGAGCCCCAGTG...TCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp CCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGCACTGGGGCTCTGGGTaGGAGGTTGGTGAGTTGTTC +
Preference number: 5 (lower is better)
Translates to: PRHMRSQLQVQELQPTVGHWGSG*EVGELF
Trigger: GAACAACTCACCAACCTCCAACCCAGAGCCCCAGTG...CCCTACAGTGGGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS TCA 90 bp TTGTCCTCATGCAGCACCACCTCCATCCCAGGGTGGTCATCGTCATaGTCTCCTACGTCATCGTCGTCGTCATCATCATCCATCTCTCGC +
Preference number: 5 (lower is better)
Translates to: LSSCSTTSIPGWSSS*SPTSSSSSSSSISR
Trigger: GCGAGAGATGGATGATGATGACGACGACGATGACGTAGGAGATCATGACGATGACCACCCTGGGATGGAGGTGGTGCTGCATGAGGACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402521.7
CDS TCA 90 bp TGTCACCAAAGGTGTCGGCATAGATCTTGGCAAAGGAGCCCAGCGTaGAGCAGATGCTGTACTGGGAGCTGGAGAAGCAGACGTTACCCA +
Preference number: 5 (lower is better)
Translates to: CHQRCRHRSWQRSPA*SRCCTGSWRSRRYP
Trigger: TGGGTAACGTCTGCTTCTCCAGCTCCCAGTACAGCATCTGCTTCACGCTGGGCTCCTTTGCCAAGATCTATGCCGACACCTTTGGTGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590367.5
ENST00000591382.5
ENST00000592576.5
CDS TCA 90 bp AATTCATCACAGAGGGGGCCCTCCCTGGTTCCCCACTGGAAACCTTaGACGATGCTGTCCTTCACTGAACCAAGAAGAGCCTTGTCCACC +
Preference number: 5 (lower is better)
Translates to: NSSQRGPSLVPHWKP*TMLSFTEPRRALST
Trigger: GGTGGACAAGGCTCTTCTTGGTTCAGTGAAGGACAGCATCGTTCAAGGTTTCCAGTGGGGAACCAGGGAGGGCCCCCTCTGTGATGAATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000589769.1
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS GCA 90 bp GGAACTCGGTATCACAGCCACTCTCCAGCCCTCGGAAGGGACTTGTaGAAGACACTCAGTTTTGCCAACAGCCTGGTCCAAGAAAGTGAC +
Preference number: 5 (lower is better)
Translates to: GTRYHSHSPALGRDL*KTLSFANSLVQESD
Trigger: GTCACTTTCTTGGACCAGGCTGTTGGCAAAACTGAGTGTCTTGCACAAGTCCCTTCCGAGGGCTGGAGAGTGGCTGTGATACCGAGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590367.5
CDS GCA 90 bp TCTTCCGCAAATCATGCATCACACAGTCCAGGTAGAGCTCCCCAGTaGCCAGGATCACATGCTCGCCAGACTCCTCCACCTGAAACACAA +
Preference number: 5 (lower is better)
Translates to: SSANHASHSPGRAPQ*PGSHARQTPPPETQ
Trigger: TTGTGTTTCAGGTGGAGGAGTCTGGCGAGCATGTGATCCTGGGCACTGGGGAGCTCTACCTGGACTGTGTGATGCATGATTTGCGGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590977.5
CDS CCA 90 bp TTGAACTATGGTCTCCACCTCAGGACCATACACCTCCTCGGCTGTTaGGTAGTACTTCTTGTCCTCATGCAGCACCACCTCCATCCCAGG +
Preference number: 5 (lower is better)
Translates to: LNYGLHLRTIHLLGC*VVLLVLMQHHLHPR
Trigger: CCTGGGATGGAGGTGGTGCTGCATGAGGACAAGAAGTACTACCCAACAGCCGAGGAGGTGTATGGTCCTGAGGTGGAGACCATAGTTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000589825.5
ENST00000591382.5
ENST00000592408.5
ENST00000592576.5
ENST00000592701.2
ENST00000593072.5
CDS CCA 90 bp ACCACCGGTGTAGGTGTGCTCAATCTTGGGCTTGGCGCCCACCTTTaGAGAAGGGATATGCTGCACACACATGTCCACAAAGCCTGTGAA +
Preference number: 5 (lower is better)
Translates to: TTGVGVLNLGLGAHL*RRDMLHTHVHKACE
Trigger: TTCACAGGCTTTGTGGACATGTGTGTGCAGCATATCCCTTCTCCAAAGGTGGGCGCCAAGCCCAAGATTGAGCACACCTACACCGGTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000585616.5
ENST00000585794.5
ENST00000586654.5
ENST00000590367.5
ENST00000591382.5
ENST00000592576.5
CDS CCA 90 bp TTTCCAGGCTACACCACCAGGATAAGGAAGGAAAAGGGAAGAAGCTaGCCCAGGACTTGGGATGGTCCTGTGTACCCCAAGCTGCTTCTC +
Preference number: 5 (lower is better)
Translates to: FPGYTTRIRKEKGRS*PRTWDGPVYPKLLL
Trigger: GAGAAGCAGCTTGGGGTACACAGGACCATCCCAAGTCCTGGGCCAGCTTCTTCCCTTTTCCTTCCTTATCCTGGTGGTGTAGCCTGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586276.5
ENST00000590367.5
ENST00000590977.5
CDS CCA 90 bp ACGGCTGAAAGCGGCACGGATAGAAGAGGAAGTGAGCGAGGGGACTaGACAGTTAGAGCACCACTCCTACCTAGCGATACGATTTTACGG +
Preference number: 5 (lower is better)
Translates to: TAESGTDRRGSERGD*TVRAPLLPSDTILR
Trigger: CCGTAAAATCGTATCGCTAGGTAGGAGTGGTGCTCTAACTGTCCAGTCCCCTCGCTCACTTCCTCTTCTATCCGTGCCGCTTTCAGCCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000591382.5
CDS-3UTR CAA 90 bp CTCACTGGGGCTCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGACACCTCCTCGGCTGTaGGGTAGTACTTCTTGTCCT +
Preference number: 5 (lower is better)
Translates to: LTGALGWRLVSCSRWQQQTPPRL*GSTSCP
Trigger: AGGACAAGAAGTACTACCCAACAGCCGAGGAGGTGT...CTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGAGCCCCAGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp AACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCAGGCCATCAAGCATCTaGGGCAGCTCTGAGGGGTTG +
Preference number: 5 (lower is better)
Translates to: NTKATSYEVSASSTGVAARPSSI*GSSEGL
Trigger: CAACCCCTCAGAGCTGCCCAAGATGCTTGATGGCCT...GGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp TCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACAGGCCATCAAGCATCTaGGGCAGCTCTGAGGGGTTG +
Preference number: 5 (lower is better)
Translates to: SGLEVGELFKMATAASRHRPSSI*GSSEGL
Trigger: CAACCCCTCAGAGCTGCCCAAGATGCTTGATGGCCT...GTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp AACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCTCATCCACCAGAATGTaGGGGCCAGTCGCATCAGGG +
Preference number: 5 (lower is better)
Translates to: NTKATSYEVSASSTGVAASSTRM*GPVASG
Trigger: CCCTGATGCGACTGGCCCCAACATTCTGGTGGATGA...GGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp GGCTCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCAGAGAACCAAGAAGAGCCTaGTCCACCTCAGAGGGCAGA +
Preference number: 5 (lower is better)
Translates to: GSGLEVGELFKMATAASREPRRA*STSEGR
Trigger: TCTGCCCTCTGAGGTGGACAAGGCTCTTCTTGGTTC...TCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp CTCACATCTTCACTGAGGCCCTTCCTACGGCGGGTTTTGATCATGAATTCCCGGGAACCAAGAAGAGCCTaGTCCACCTCAGAGGGCAGA +
Preference number: 5 (lower is better)
Translates to: LTSSLRPFLRRVLIMNSREPRRA*STSEGR
Trigger: TCTGCCCTCTGAGGTGGACAAGGCTCTTCTTGGTTC...CCGGGAATTCATGATCAAAACCCGCCGTAGGAAGGGCCTCAGTGAAGATGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589769.1
CDS-3UTR CAA 90 bp CATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGGAACCAAGAAGAGCCTaGTCCACCTCAGAGGGCAGA +
Preference number: 5 (lower is better)
Translates to: HMRSQLQVQELQPTVGSREPRRA*STSEGR
Trigger: TCTGCCCTCTGAGGTGGACAAGGCTCTTCTTGGTTC...CCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp ACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACAGACAGAGAAAAGGCTaGTCCCTGGGTGTGAGTCCG +
Preference number: 5 (lower is better)
Translates to: TKATSYEVSASSTGVAAHRQRKG*SLGVSP
Trigger: CGGACTCACACCCAGGGACAAGCCTTTTCTCTGTCT...GTGGGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp TCCTCTCTCACTGGGGCTCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAATTCCTACGGCGGGTTTaGATCATGAATTCCCGGGCC +
Preference number: 5 (lower is better)
Translates to: SSLTGALGWRLVSCSRWQFLRRV*IMNSRA
Trigger: GGCCCGGGAATTCATGATCAAAACCCGCCGTAGGAA...TTGCCATCTTGAACAACTCACCAACCTCCAACCCAGAGCCCCAGTGAGAGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp CCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGTTCCTACGGCGGGTTTaGATCATGAATTCCCGGGCC +
Preference number: 5 (lower is better)
Translates to: PRHMRSQLQVQELQPTVGFLRRV*IMNSRA
Trigger: GGCCCGGGAATTCATGATCAAAACCCGCCGTAGGAA...CCCTACAGTGGGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp GGCTCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACTTCAAGTACAGGAGTaGCAGCCCACTGTAGGGAGC +
Preference number: 5 (lower is better)
Translates to: GSGLEVGELFKMATAASRLQVQE*QPTVGS
Trigger: GCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAG...TCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp AACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCGCTCCTCTCTTTTCCTaGGGAATGGAGCCCGGCAGA +
Preference number: 5 (lower is better)
Translates to: NTKATSYEVSASSTGVAAAPLFS*GMEPGR
Trigger: TCTGCCGGGCTCCATTCCCAAGGAAAAGAGAGGAGC...GGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS TCA 90 bp CTCCCTGGTTCCCCACTGGAAACCTTGAACGATGCTGTCCTTCACTaGACCAAGAAGAGCCTTGTCCACCTCAGAGGGCAGAGTATCATC +
Preference number: 5 (lower is better)
Translates to: LPGSPLETLNDAVLH*TKKSLVHLRGQSII
Trigger: GATGATACTCTGCCCTCTGAGGTGGACAAGGCTCTTCTTGGTTCAGTGAAGGACAGCATCGTTCAAGGTTTCCAGTGGGGAACCAGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000586276.5
ENST00000589769.1
ENST00000590124.5
ENST00000590367.5
ENST00000590977.5
ENST00000591382.5
ENST00000592576.5
CDS TCA 90 bp ACCCATGTCATTCTCAACCCACAGCATCTGAGTGAAGCTCTGCCCTaGAGCCCCAACATGGTCTGCTGCCCAGGAAACCCAGTGTTTTCT +
Preference number: 5 (lower is better)
Translates to: THVILNPQHLSEALP*SPNMVCCPGNPVFS
Trigger: AGAAAACACTGGGTTTCCTGGGCAGCAGACCATGTTGGGGCTTCAGGGCAGAGCTTCACTCAGATGCTGTGGGTTGAGAATGACATGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588340.1
CDS CCA 90 bp TGCTCATGTGTGTCCCTGGGACCATCTAGCTTAAGCCAACCCAGTTaGTCTCTTCAGAAACTCTACCTCCTCATTGCCTCGGGGTTCGGT +
Preference number: 5 (lower is better)
Translates to: CSCVSLGPSSLSQPS*SLQKLYLLIASGFG
Trigger: ACCGAACCCCGAGGCAATGAGGAGGTAGAGTTTCTGAAGAGACCAACTGGGTTGGCTTAAGCTAGATGGTCCCAGGGACACACATGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586276.5
CDS-3UTR CAA 90 bp ACTGGGGCTCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTGCCTACACCTCTCTCTaGCTCTGTGAAGAGGATGTC +
Preference number: 5 (lower is better)
Translates to: TGALGWRLVSCSRWQQQLAYTSL*LCEEDV
Trigger: GACATCCTCTTCACAGAGCAAGAGAGAGGTGTAGGC...AAGCTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGAGCCCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp ACGCCTGAGAGCCAGAGGACGGGTGAAGGGTTTGATGCCAAGGGGCATTATTTCGTCACAGGAGTGCTTTaGATGCCTACACCTCTCTCT +
Preference number: 5 (lower is better)
Translates to: TPESQRTGEGFDAKGHYFVTGVL*MPTPLS
Trigger: AGAGAGAGGTGTAGGCATCAAAAGCACTCCTGTGAC...GAAATAATGCCCCTTGGCATCAAACCCTTCACCCGTCCTCTGGCTCTCAGGCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426333.7
CDS-3UTR CAA 90 bp TGGGGCTCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCGTCACAGGAGTGCTTTaGATGCCTACACCTCTCTCT +
Preference number: 5 (lower is better)
Translates to: WGSGLEVGELFKMATAASVTGVL*MPTPLS
Trigger: AGAGAGAGGTGTAGGCATCAAAAGCACTCCTGTGAC...GGAAGCTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGAGCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp ACAACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGTCCTGCACCGCATGCTaGATCAGCCGCTCTGTGTTC +
Preference number: 5 (lower is better)
Translates to: TTRRPRHMRSQLQVQELQSCTAC*ISRSVF
Trigger: GAACACAGAGCGGCTGATCAAGCATGCGGTGCAGGA...CTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTTGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp GTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAATCAGCCGGTCAATCTaGTTGATGCACACAGTGACT +
Preference number: 5 (lower is better)
Translates to: VSASSTGVAAHCREQELPISRSI*LMHTVT
Trigger: AGTCACTGTGTGCATCAACAAGATTGACCGGCTGAT...TGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAGCTGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp GTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGGGGTTCGGTTATGGTaGCTGTCTTCACAATTGGTT +
Preference number: 5 (lower is better)
Translates to: VSASSTGVAAHCREQELPGVRLW*LSSQLV
Trigger: AACCAATTGTGAAGACAGCAACCATAACCGAACCCC...TGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAGCTGAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp CTCACTGGGGCTCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGACTGGGTCAGCCACCTaGATGTCTATCTCTGAGTAC +
Preference number: 5 (lower is better)
Translates to: LTGALGWRLVSCSRWQQQTGSAT*MSISEY
Trigger: GTACTCAGAGATAGACATCAAGGTGGCTGACCCAGT...CTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGAGCCCCAGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp TCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACGAACCAAGAAGAGCCTaGTCCACCTCAGAGGGCAGA +
Preference number: 5 (lower is better)
Translates to: SGLEVGELFKMATAASRHEPRRA*STSEGR
Trigger: TCTGCCCTCTGAGGTGGACAAGGCTCTTCTTGGTTC...GTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp CATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGTCCCCACTGGAAACCTaGAACGATGCTGTCCTTCAC +
Preference number: 5 (lower is better)
Translates to: HMRSQLQVQELQPTVGSRSPLET*NDAVLH
Trigger: GTGAAGGACAGCATCGTTCAAGGTTTCCAGTGGGGA...CCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp ACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACGCCGGGATAAAAGCTTaGATGGTGTACAGAGGGGAG +
Preference number: 5 (lower is better)
Translates to: TKATSYEVSASSTGVAAHAGIKA*MVYRGE
Trigger: CTCCCCTCTGTACACCATCAAAGCTTTTATCCCGGC...GTGGGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp TCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACAGACAGAGAAAAGGCTaGTCCCTGGGTGTGAGTCCG +
Preference number: 5 (lower is better)
Translates to: SGLEVGELFKMATAASRHRQRKG*SLGVSP
Trigger: CGGACTCACACCCAGGGACAAGCCTTTTCTCTGTCT...GTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp GAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACTCTCTGACAACACGAAGGCGGATGACAATGCTCTaGTCCAGGGGATCACCAGGC +
Preference number: 5 (lower is better)
Translates to: ELFKMATAASRHSLTTRRRMTML*SRGSPG
Trigger: GCCTGGTGATCCCCTGGACAAGAGCATTGTCATCCG...CCTTCGTGTTGTCAGAGAGTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp TCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACTTCCTACGGCGGGTTTaGATCATGAATTCCCGGGCC +
Preference number: 5 (lower is better)
Translates to: SGLEVGELFKMATAASRHFLRRV*IMNSRA
Trigger: GGCCCGGGAATTCATGATCAAAACCCGCCGTAGGAA...GTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp TCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACCTTCAAGTACAGGAGTaGCAGCCCACTGTAGGGAGC +
Preference number: 5 (lower is better)
Translates to: SGLEVGELFKMATAASRHLQVQE*QPTVGS
Trigger: GCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAG...GTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp CCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGGCTCTGGGTTGGAGGTaGGTGAGTTGTTCAAGATGG +
Preference number: 5 (lower is better)
Translates to: PRHMRSQLQVQELQPTVGALGWR*VSCSRW
Trigger: CCATCTTGAACAACTCACCAACCTCCAACCCAGAGC...CCCTACAGTGGGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS TCA 90 bp TTGTCCTCATGCAGCACCACCTCCATCCCAGGGTGGTCATCGTCATaGTCTCCTACGTCATCGTCGTCGTCATCATCATCCATCTCATCA +
Preference number: 5 (lower is better)
Translates to: LSSCSTTSIPGWSSS*SPTSSSSSSSSISS
Trigger: TGATGAGATGGATGATGATGACGACGACGATGACGTAGGAGATCATGACGATGACCACCCTGGGATGGAGGTGGTGCTGCATGAGGACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000426333.7
ENST00000589825.5
ENST00000591382.5
ENST00000592576.5
ENST00000592701.2
ENST00000593072.5
CDS TCA 90 bp TTGTCCTCATGCAGCACCACCTCCATCCCAGGGTGGTCATCGTCATaGTCTCCTACGTCATCGTCGTCGTCATCATCATCCATCTGTAGT +
Preference number: 5 (lower is better)
Translates to: LSSCSTTSIPGWSSS*SPTSSSSSSSSICS
Trigger: ACTACAGATGGATGATGATGACGACGACGATGACGTAGGAGATCATGACGATGACCACCCTGGGATGGAGGTGGTGCTGCATGAGGACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592408.5
CDS TCA 90 bp TTGTCCTCATGCAGCACCACCTCCATCCCAGGGTGGTCATCGTCATaGTCTCCTACGTCATCGTCGTCGTCATCATCATCCATCAATTCC +
Preference number: 5 (lower is better)
Translates to: LSSCSTTSIPGWSSS*SPTSSSSSSSSINS
Trigger: GGAATTGATGGATGATGATGACGACGACGATGACGTAGGAGATCATGACGATGACCACCCTGGGATGGAGGTGGTGCTGCATGAGGACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589211.1
CDS-3UTR CAA 90 bp TCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACACACCTCCTCGGCTGTaGGGTAGTACTTCTTGTCCT +
Preference number: 5 (lower is better)
Translates to: SGLEVGELFKMATAASRHTPPRL*GSTSCP
Trigger: AGGACAAGAAGTACTACCCAACAGCCGAGGAGGTGT...GTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp CATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGCTGAGTGTCTTCCTCTaGAACTATGGTCTCCACCTC +
Preference number: 5 (lower is better)
Translates to: HMRSQLQVQELQPTVGSRLSVFL*NYGLHL
Trigger: GAGGTGGAGACCATAGTTCAAGAGGAAGACACTCAG...CCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp AACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCGCCTACACCTCTCTCTaGCTCTGTGAAGAGGATGTC +
Preference number: 5 (lower is better)
Translates to: NTKATSYEVSASSTGVAAAYTSL*LCEEDV
Trigger: GACATCCTCTTCACAGAGCAAGAGAGAGGTGTAGGC...GGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp TCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACAGCCGGTCAATCTTGTaGATGCACACAGTGACTGCC +
Preference number: 5 (lower is better)
Translates to: SGLEVGELFKMATAASRHSRSIL*MHTVTA
Trigger: GGCAGTCACTGTGTGCATCAACAAGATTGACCGGCT...GTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp TGGGGCTCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCATCAGCCGGTCAATCTaGTTGATGCACACAGTGACT +
Preference number: 5 (lower is better)
Translates to: WGSGLEVGELFKMATAASISRSI*LMHTVT
Trigger: AGTCACTGTGTGCATCAACAAGATTGACCGGCTGAT...GGAAGCTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGAGCCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp CAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGGAGTCCACGTGTCTTCACAATTGGTaGATCAACACCTTCAATCAG +
Preference number: 5 (lower is better)
Translates to: QVQELQPTVGSRSSQESTCLHNW*INTFNQ
Trigger: CTGATTGAAGGTGTTGATCAACCAATTGTGAAGACA...CGTGGACTCCTGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp CAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGGAGTCCACGTTGCTGTCTTCACAATaGGTTGATCAACACCTTCAA +
Preference number: 5 (lower is better)
Translates to: QVQELQPTVGSRSSQESTLLSSQ*VDQHLQ
Trigger: TTGAAGGTGTTGATCAACCAATTGTGAAGACAGCAA...CGTGGACTCCTGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp ACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACACTGGGTCAGCCACCTaGATGTCTATCTCTGAGTAC +
Preference number: 5 (lower is better)
Translates to: TKATSYEVSASSTGVAAHTGSAT*MSISEY
Trigger: GTACTCAGAGATAGACATCAAGGTGGCTGACCCAGT...GTGGGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp CATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGGTTTCAGCAAAGCACTaGAGGGAGGATGTTTCCACC +
Preference number: 5 (lower is better)
Translates to: HMRSQLQVQELQPTVGSRVSAKH*REDVST
Trigger: GGTGGAAACATCCTCCCTCAAGTGCTTTGCTGAAAC...CCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp CCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGATCCCAATCGTACTaGGTCTGGAAGAACTCTCCC +
Preference number: 5 (lower is better)
Translates to: PRHMRSQLQVQELQPTVGRSQSY*VWKNSP
Trigger: GGGAGAGTTCTTCCAGACCAAGTACGATTGGGATCT...CCCTACAGTGGGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp GTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACTCTCTGACAACATCATCCACCAGAATGTaGGGGCCAGTCGCATCAGGG +
Preference number: 5 (lower is better)
Translates to: VGELFKMATAASRHSLTTSSTRM*GPVASG
Trigger: CCCTGATGCGACTGGCCCCAACATTCTGGTGGATGA...TGTTGTCAGAGAGTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp TCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGGAGTCCACGGATCATCGAAGAATTaGCTGATGCTCACATCTTCA +
Preference number: 5 (lower is better)
Translates to: SSTGVAAHCREQELPGVHGSSKN*LMLTSS
Trigger: TGAAGATGTGAGCATCAGCAAATTCTTCGATGATCC...GTGGACTCCTGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp TTCACTGAGGCCCTTCCTACGGCGGGTTTTGATCATGAATTCCCGGGCCAGGTGAGCACAACATCCTGTTaGGCAAGTTCCAGCAACATA +
Preference number: 5 (lower is better)
Translates to: FTEALPTAGFDHEFPGQVSTTSC*ASSSNI
Trigger: TATGTTGCTGGAACTTGCCAAACAGGATGTTGTGCT...CACCTGGCCCGGGAATTCATGATCAAAACCCGCCGTAGGAAGGGCCTCAGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589769.1
CDS-3UTR CAA 90 bp GACAACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCACTTCAAGTACAGGAGTaGCAGCCCACTGTAGGGAGC +
Preference number: 5 (lower is better)
Translates to: DNTKATSYEVSASSTGVALQVQE*QPTVGS
Trigger: GCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAG...TGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp GCATGGAGTGGGAGCAAGGGGGCAATAATGGGGCCTTGGCGCTCATGGGAACACATCTCATCAAGATCTTaGGTCTCTCTACCCAATTCA +
Preference number: 5 (lower is better)
Translates to: AWSGSKGAIMGPWRSWEHISSRS*VSLPNS
Trigger: TGAATTGGGTAGAGAGACCAAAGATCTTGATGAGAT...GTGTTCCCATGAGCGCCAAGGCCCCATTATTGCCCCCTTGCTCCCACTCCATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426333.7
CDS-3UTR CAA 90 bp TCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACGCTCTGGGTTGGAGGTaGGTGAGTTGTTCAAGATGG +
Preference number: 5 (lower is better)
Translates to: SGLEVGELFKMATAASRHALGWR*VSCSRW
Trigger: CCATCTTGAACAACTCACCAACCTCCAACCCAGAGC...GTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp TCTGACAACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTCACTGGGGCTCTGGGTaGGAGGTTGGTGAGTTGTTC +
Preference number: 5 (lower is better)
Translates to: SDNTKATSYEVSASSTGVHWGSG*EVGELF
Trigger: GAACAACTCACCAACCTCCAACCCAGAGCCCCAGTG...AACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTTGTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp GTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACTCTCTGACAACAGCTCCTCTCTTTTCCTaGGGAATGGAGCCCGGCAGA +
Preference number: 5 (lower is better)
Translates to: VGELFKMATAASRHSLTTAPLFS*GMEPGR
Trigger: TCTGCCGGGCTCCATTCCCAAGGAAAAGAGAGGAGC...TGTTGTCAGAGAGTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp TTGGGAGATGACATATATTCAGAATGTAAGCACCAGACGGGGCAGGGGAGACGATGCTTGAAGCAGCTGTaGGGACCTGGGGCAGAAAGA +
Preference number: 5 (lower is better)
Translates to: LGDDIYSECKHQTGQGRRCLKQL*GPGAER
Trigger: TCTTTCTGCCCCAGGTCCCAACAGCTGCTTCAAGCA...TCGTCTCCCCTGCCCCGTCTGGTGCTTACATTCTGAATATATGTCATCTCCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000426333.7
CDS TCA 90 bp CAGCTACTACTTAGCATCTGTTCCAGCCTCTTCAAGAAGGTTCAGTaGGGAGCATCTGCCTATGAGTGGGTCCTCAAGACACCAGGACCA +
Preference number: 5 (lower is better)
Translates to: QLLLSICSSLFKKVQ*GASAYEWVLKTPGP
Trigger: TGGTCCTGGTGTCTTGAGGACCCACTCATAGGCAGATGCTCCTCACTGAACCTTCTTGAAGAGGCTGGAACAGATGCTAAGTAGTAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590977.5
CDS TCA 90 bp CTGACTCACCCCCTCAGCAGCATCAATGAAAAGGACCACTCCATCTaGGATGCGCAAGCCAGCTGTGACCTCATCAGAGAAATTCACATG +
Preference number: 5 (lower is better)
Translates to: LTHPLSSINEKDHSI*DAQASCDLIREIHM
Trigger: CATGTGAATTTCTCTGATGAGGTCACAGCTGGCTTGCGCATCTCAGATGGAGTGGTCCTTTTCATTGATGCTGCTGAGGGGGTGAGTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000589475.1
CDS GCA 90 bp TGCTCAATCTTGGGCTTGGCGCCCACCTTTGGAGAAGGGATATGCTaGACACACATGTCCACAAAGCCTGTGAACTCGCCAAAGAACTTT +
Preference number: 5 (lower is better)
Translates to: CSILGLAPTFGEGIC*THMSTKPVNSPKNF
Trigger: AAAGTTCTTTGGCGAGTTCACAGGCTTTGTGGACATGTGTGTGCAGCATATCCCTTCTCCAAAGGTGGGCGCCAAGCCCAAGATTGAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000585616.5
ENST00000585794.5
ENST00000586654.5
ENST00000590367.5
ENST00000591382.5
ENST00000592576.5
CDS GCA 90 bp GGGCCTGTCATGGGGCCATGGCAGAGTAGCAGTCTCCTGCAACACTaGAGCTGTCTTGCAGTCATGAAAGACATGGTACAGAAATCAAAT +
Preference number: 5 (lower is better)
Translates to: GPVMGPWQSSSLLQH*SCLAVMKDMVQKSN
Trigger: ATTTGATTTCTGTACCATGTCTTTCATGACTGCAAGACAGCTGCAGTGTTGCAGGAGACTGCTACTCTGCCATGGCCCCATGACAGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586276.5
ENST00000590367.5
ENST00000590977.5
CDS CCA 90 bp GCAGATGCTGTACTGGGAGCTGGAGAAGCAGACGTTACCCAGGAGTaGGGAAAGGATCAGGTTCTCATCAGTGGAATACATGCTGAAACA +
Preference number: 5 (lower is better)
Translates to: ADAVLGAGEADVTQE*GKDQVLISGIHAET
Trigger: TGTTTCAGCATGTATTCCACTGATGAGAACCTGATCCTTTCCCCACTCCTGGGTAACGTCTGCTTCTCCAGCTCCCAGTACAGCATCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590367.5
CDS CCA 90 bp GCTCGCCAGACTCCTCCACCTGAAACACAACAGGCAGTCACAGCCTaGATTCTCTTATGCCAGCAAAGGCACACACAAACAAAATCAAGG +
Preference number: 5 (lower is better)
Translates to: ARQTPPPETQQAVTA*ILLCQQRHTQTKSR
Trigger: CCTTGATTTTGTTTGTGTGTGCCTTTGCTGGCATAAGAGAATCCAGGCTGTGACTGCCTGTTGTGTTTCAGGTGGAGGAGTCTGGCGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590977.5
CDS-3UTR CAA 90 bp ACAACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGAGCCGGTCAATCTTGTaGATGCACACAGTGACTGCC +
Preference number: 5 (lower is better)
Translates to: TTRRPRHMRSQLQVQELQSRSIL*MHTVTA
Trigger: GGCAGTCACTGTGTGCATCAACAAGATTGACCGGCT...CTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTTGT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp TCCTCTCTCACTGGGGCTCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAAATCAGCCGGTCAATCTaGTTGATGCACACAGTGACT +
Preference number: 5 (lower is better)
Translates to: SSLTGALGWRLVSCSRWQISRSI*LMHTVT
Trigger: AGTCACTGTGTGCATCAACAAGATTGACCGGCTGAT...TTGCCATCTTGAACAACTCACCAACCTCCAACCCAGAGCCCCAGTGAGAGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp TCCTCTCTCACTGGGGCTCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAATGTAATAAGCATCAGTaGGAGGCAGCTTCAGCTCCA +
Preference number: 5 (lower is better)
Translates to: SSLTGALGWRLVSCSRWQCNKHQ*EAASAP
Trigger: TGGAGCTGAAGCTGCCTCCAACTGATGCTTATTACA...TTGCCATCTTGAACAACTCACCAACCTCCAACCCAGAGCCCCAGTGAGAGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp CATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGTGTAATAAGCATCAGTaGGAGGCAGCTTCAGCTCCA +
Preference number: 5 (lower is better)
Translates to: HMRSQLQVQELQPTVGSRCNKHQ*EAASAP
Trigger: TGGAGCTGAAGCTGCCTCCAACTGATGCTTATTACA...CCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp ACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACCTAGTTGGGGCCTTTTaGGTGAACTTTCGCGTCTTA +
Preference number: 5 (lower is better)
Translates to: TKATSYEVSASSTGVAAHLVGAF*VNFRVL
Trigger: TAAGACGCGAAAGTTCACCAAAAAGGCCCCAACTAG...GTGGGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp GAGCAAGACAGAGGTCAGAATGTTCTGTTCACTTGCAAACCATGGCTAAGGTCAGCTTGGCGCCCACCTTaGGAGAAGGGATATGCTGCA +
Preference number: 5 (lower is better)
Translates to: EQDRGQNVLFTCKPWLRSAWRPP*EKGYAA
Trigger: TGCAGCATATCCCTTCTCCAAAGGTGGGCGCCAAGC...TGACCTTAGCCATGGTTTGCAAGTGAACAGAACATTCTGACCTCTGTCTTGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426333.7
ENST00000592576.5
CDS-3UTR CAA 90 bp GACAACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCATCAATCAGAACCCAGTaGCCAGCAGGAACACGGTTC +
Preference number: 5 (lower is better)
Translates to: DNTKATSYEVSASSTGVASIRTQ*PAGTRF
Trigger: GAACCGTGTTCCTGCTGGCAACTGGGTTCTGATTGA...TGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp CATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGGGGGTTCGGTTATGGTaGCTGTCTTCACAATTGGTT +
Preference number: 5 (lower is better)
Translates to: HMRSQLQVQELQPTVGSRGVRLW*LSSQLV
Trigger: AACCAATTGTGAAGACAGCAACCATAACCGAACCCC...CCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp TGGGGCTCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCGGCTCCACAGCAATCTaGATAACAGATGTGGTATTG +
Preference number: 5 (lower is better)
Translates to: WGSGLEVGELFKMATAASGSTAI*ITDVVL
Trigger: CAATACCACATCTGTTATCAAGATTGCTGTGGAGCC...GGAAGCTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGAGCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp AACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCGTTTCAGCAAAGCACTaGAGGGAGGATGTTTCCACC +
Preference number: 5 (lower is better)
Translates to: NTKATSYEVSASSTGVAAVSAKH*REDVST
Trigger: GGTGGAAACATCCTCCCTCAAGTGCTTTGCTGAAAC...GGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp TCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACGTTTCAGCAAAGCACTaGAGGGAGGATGTTTCCACC +
Preference number: 5 (lower is better)
Translates to: SGLEVGELFKMATAASRHVSAKH*REDVST
Trigger: GGTGGAAACATCCTCCCTCAAGTGCTTTGCTGAAAC...GTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp GTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACTCTCTGACAACAGAACCAAGAAGAGCCTaGTCCACCTCAGAGGGCAGA +
Preference number: 5 (lower is better)
Translates to: VGELFKMATAASRHSLTTEPRRA*STSEGR
Trigger: TCTGCCCTCTGAGGTGGACAAGGCTCTTCTTGGTTC...TGTTGTCAGAGAGTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp GACAACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCGGGATAAAAGCTTaGATGGTGTACAGAGGGGAG +
Preference number: 5 (lower is better)
Translates to: DNTKATSYEVSASSTGVAAGIKA*MVYRGE
Trigger: CTCCCCTCTGTACACCATCAAAGCTTTTATCCCGGC...TGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp GAGCAAGACAGAGGTCAGAATGTTCTGTTCACTTGCAAACCATGGCTAAGGTCACGGATGACAATGCTCTaGTCCAGGGGATCACCAGGC +
Preference number: 5 (lower is better)
Translates to: EQDRGQNVLFTCKPWLRSRMTML*SRGSPG
Trigger: GCCTGGTGATCCCCTGGACAAGAGCATTGTCATCCG...TGACCTTAGCCATGGTTTGCAAGTGAACAGAACATTCTGACCTCTGTCTTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426333.7
ENST00000592576.5
CDS-3UTR CAA 90 bp CACTCACATGGGGTAATTGAGCACAACATCCTGTTTGGCAAGTTCCAGCAACATCGGATGACAATGCTCTaGTCCAGGGGATCACCAGGC +
Preference number: 5 (lower is better)
Translates to: HSHGVIEHNILFGKFQQHRMTML*SRGSPG
Trigger: GCCTGGTGATCCCCTGGACAAGAGCATTGTCATCCG...ATGTTGCTGGAACTTGCCAAACAGGATGTTGTGCTCAATTACCCCATGTGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589769.1
CDS-3UTR CAA 90 bp TCTGACAACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTTTCCTACGGCGGGTTTaGATCATGAATTCCCGGGCC +
Preference number: 5 (lower is better)
Translates to: SDNTKATSYEVSASSTGVFLRRV*IMNSRA
Trigger: GGCCCGGGAATTCATGATCAAAACCCGCCGTAGGAA...AACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTTGTCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp CTGATGTGTAACATGACAATAACCACCCCTGGCCTGCCTACCTTGCAGGCTGCTTTGGAGGTTGGTGAGTaGTTCAAGATGGCAACAGCA +
Preference number: 5 (lower is better)
Translates to: LMCNMTITTPGLPTLQAALEVGE*FKMATA
Trigger: TGCTGTTGCCATCTTGAACAACTCACCAACCTCCAA...AGCAGCCTGCAAGGTAGGCAGGCCAGGGGTGGTTATTGTCATGTTACACATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426333.7
CDS-3UTR CAA 90 bp CTCCACGAAACTTCTCTGGGAGCTGCTAGTTGGGGCCTTTTTGGTGAACTTTCGCTAGTTGGGGCCTTTTaGGTGAACTTTCGCCTAGCA +
Preference number: 5 (lower is better)
Translates to: LHETSLGAASWGLFGELSLVGAF*VNFRLA
Trigger: TGCTAGGCGAAAGTTCACCAAAAAGGCCCCAACTAG...CGAAAGTTCACCAAAAAGGCCCCAACTAGCAGCTCCCAGAGAAGTTTCGTGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000591856.1
CDS TCA 90 bp AGCCTGCTTCCTGGGAATGTGCTGCTAGAAGATTTGGAGTCACCCTaGTGCCAGAAAAGAGCAAGCAGCAGGTATCAGTGGTACATGGTT +
Preference number: 5 (lower is better)
Translates to: SLLPGNVLLEDLESP*CQKRASSRYQWYMV
Trigger: AACCATGTACCACTGATACCTGCTGCTTGCTCTTTTCTGGCATCAGGGTGACTCCAAATCTTCTAGCAGCACATTCCCAGGAAGCAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587914.1
CDS TCA 90 bp GGCAGAGTAGCAGTCTCCTGCAACACTGCAGCTGTCTTGCAGTCATaGAAGACATGGTACAGAAATCAAATGGGAGGTGGGCGTTCTAAC +
Preference number: 5 (lower is better)
Translates to: GRVAVSCNTAAVLQS*KTWYRNQMGGGRSN
Trigger: GTTAGAACGCCCACCTCCCATTTGATTTCTGTACCATGTCTTTCATGACTGCAAGACAGCTGCAGTGTTGCAGGAGACTGCTACTCTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586276.5
ENST00000590367.5
ENST00000590977.5
CDS GCA 90 bp CTTCCTGTTCCACGTAATCTGGACCACCTCATTCTCTATGTCCTCTaGCAGGCCCTTCTCAAGAGGCTCAGCAATCATGGTGATCTTGTT +
Preference number: 5 (lower is better)
Translates to: LPVPRNLDHLILYVL*QALLKRLSNHGDLV
Trigger: AACAAGATCACCATGATTGCTGAGCCTCTTGAGAAGGGCCTGGCAGAGGACATAGAGAATGAGGTGGTCCAGATTACGTGGAACAGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000586276.5
ENST00000590124.5
ENST00000590367.5
ENST00000590977.5
ENST00000591382.5
ENST00000592576.5
CDS CCA 90 bp CTCCTCATTGCCTCGGGGTTCGGTTATGGTTGCTGTCTTCACAATTaGTTGATCAACACCTTCAATCAGAACCCAGTTGCCAGCAGGAAC +
Preference number: 5 (lower is better)
Translates to: LLIASGFGYGCCLHN*LINTFNQNPVASRN
Trigger: GTTCCTGCTGGCAACTGGGTTCTGATTGAAGGTGTTGATCAACCAATTGTGAAGACAGCAACCATAACCGAACCCCGAGGCAATGAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000586276.5
ENST00000590367.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp GTCAGTATAGCACAGATCTTGGTCATAGCGCTTTCTGATTTCCGGGTGAGTCTGGCCTACACCTCTCTCTaGCTCTGTGAAGAGGATGTC +
Preference number: 5 (lower is better)
Translates to: VSIAQILVIALSDFRVSLAYTSL*LCEEDV
Trigger: GACATCCTCTTCACAGAGCAAGAGAGAGGTGTAGGC...CAGACTCACCCGGAAATCAGAAAGCGCTATGACCAAGATCTGTGCTATACTGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588374.1
CDS-3UTR CAA 90 bp GAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACTCTCTGACAACACGAAGGGTCACAGGAGTGCTTTaGATGCCTACACCTCTCTCT +
Preference number: 5 (lower is better)
Translates to: ELFKMATAASRHSLTTRRVTGVL*MPTPLS
Trigger: AGAGAGAGGTGTAGGCATCAAAAGCACTCCTGTGAC...CCTTCGTGTTGTCAGAGAGTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp ACTGTCACAGGAGTGCTTTTGATGCCTACACCTCTCTCTTGCTCTGTGAAGAGGGTCACAGGAGTGCTTTaGATGCCTACACCTCTCTCT +
Preference number: 5 (lower is better)
Translates to: TVTGVLLMPTPLSCSVKRVTGVL*MPTPLS
Trigger: AGAGAGAGGTGTAGGCATCAAAAGCACTCCTGTGAC...CCTCTTCACAGAGCAAGAGAGAGGTGTAGGCATCAAAAGCACTCCTGTGACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588374.1
CDS-3UTR CAA 90 bp TCTGACAACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTAGCCGGTCAATCTTGTaGATGCACACAGTGACTGCC +
Preference number: 5 (lower is better)
Translates to: SDNTKATSYEVSASSTGVSRSIL*MHTVTA
Trigger: GGCAGTCACTGTGTGCATCAACAAGATTGACCGGCT...AACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTTGTCAGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp GTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAATGCTTATTAATCCATaGACCTCATCCACAATGTGG +
Preference number: 5 (lower is better)
Translates to: VSASSTGVAAHCREQELPMLINP*TSSTMW
Trigger: CCACATTGTGGATGAGGTCAATGGATTAATAAGCAT...TGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAGCTGAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp TCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACCTAGTTGGGGCCTTTTaGGTGAACTTTCGCGTCTTA +
Preference number: 5 (lower is better)
Translates to: SGLEVGELFKMATAASRHLVGAF*VNFRVL
Trigger: TAAGACGCGAAAGTTCACCAAAAAGGCCCCAACTAG...GTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp AACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCCTAGTTGGGGCCTTTTaGGTGAACTTTCGCGTCTTA +
Preference number: 5 (lower is better)
Translates to: NTKATSYEVSASSTGVAALVGAF*VNFRVL
Trigger: TAAGACGCGAAAGTTCACCAAAAAGGCCCCAACTAG...GGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp GACAGAGGTCAGAATGTTCTGTTCACTTGCAAACCATGGCTAAGGTCAAACTTGGCTTGGCGCCCACCTTaGGAGAAGGGATATGCTGCA +
Preference number: 5 (lower is better)
Translates to: DRGQNVLFTCKPWLRSNLAWRPP*EKGYAA
Trigger: TGCAGCATATCCCTTCTCCAAAGGTGGGCGCCAAGC...CAAGTTTGACCTTAGCCATGGTTTGCAAGTGAACAGAACATTCTGACCTCTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426333.7
ENST00000592576.5
CDS-3UTR CAA 90 bp TCTGACAACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTTCAATCAGAACCCAGTaGCCAGCAGGAACACGGTTC +
Preference number: 5 (lower is better)
Translates to: SDNTKATSYEVSASSTGVSIRTQ*PAGTRF
Trigger: GAACCGTGTTCCTGCTGGCAACTGGGTTCTGATTGA...AACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTTGTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp ACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACGGCTCCACAGCAATCTaGATAACAGATGTGGTATTG +
Preference number: 5 (lower is better)
Translates to: TKATSYEVSASSTGVAAHGSTAI*ITDVVL
Trigger: CAATACCACATCTGTTATCAAGATTGCTGTGGAGCC...GTGGGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp GACAACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAACTGGGTCAGCCACCTaGATGTCTATCTCTGAGTAC +
Preference number: 5 (lower is better)
Translates to: DNTKATSYEVSASSTGVATGSAT*MSISEY
Trigger: GTACTCAGAGATAGACATCAAGGTGGCTGACCCAGT...TGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp ACAACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGGTTTCAGCAAAGCACTaGAGGGAGGATGTTTCCACC +
Preference number: 5 (lower is better)
Translates to: TTRRPRHMRSQLQVQELQVSAKH*REDVST
Trigger: GGTGGAAACATCCTCCCTCAAGTGCTTTGCTGAAAC...CTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp TCTGACAACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTTCCCCACTGGAAACCTaGAACGATGCTGTCCTTCAC +
Preference number: 5 (lower is better)
Translates to: SDNTKATSYEVSASSTGVSPLET*NDAVLH
Trigger: GTGAAGGACAGCATCGTTCAAGGTTTCCAGTGGGGA...AACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTTGTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp GTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACTCTCTGACAACATCCCCACTGGAAACCTaGAACGATGCTGTCCTTCAC +
Preference number: 5 (lower is better)
Translates to: VGELFKMATAASRHSLTTSPLET*NDAVLH
Trigger: GTGAAGGACAGCATCGTTCAAGGTTTCCAGTGGGGA...TGTTGTCAGAGAGTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp TCTGACAACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCCGGGATAAAAGCTTaGATGGTGTACAGAGGGGAG +
Preference number: 5 (lower is better)
Translates to: SDNTKATSYEVSASSTGVAGIKA*MVYRGE
Trigger: CTCCCCTCTGTACACCATCAAAGCTTTTATCCCGGC...AACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTTGTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp CACTCACATGGGGTAATTGAGCACAACATCCTGTTTGGCAAGTTCCAGCAACATAGACAGAGAAAAGGCTaGTCCCTGGGTGTGAGTCCG +
Preference number: 5 (lower is better)
Translates to: HSHGVIEHNILFGKFQQHRQRKG*SLGVSP
Trigger: CGGACTCACACCCAGGGACAAGCCTTTTCTCTGTCT...ATGTTGCTGGAACTTGCCAAACAGGATGTTGTGCTCAATTACCCCATGTGAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589769.1
CDS-3UTR CAA 90 bp AAAGGAGCAGAGCAAGACAGAGGTCAGAATGTTCTGTTCACTTGCAAACCATGGAGACAGAGAAAAGGCTaGTCCCTGGGTGTGAGTCCG +
Preference number: 5 (lower is better)
Translates to: KGAEQDRGQNVLFTCKPWRQRKG*SLGVSP
Trigger: CGGACTCACACCCAGGGACAAGCCTTTTCTCTGTCT...CCATGGTTTGCAAGTGAACAGAACATTCTGACCTCTGTCTTGCTCTGCTCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426333.7
ENST00000592576.5
CDS-3UTR CAA 90 bp TCACATGGGGTAATTGAGCACAACATCCTGTTTGGCAAGTTCCAGCAACATAGGTTCCTACGGCGGGTTTaGATCATGAATTCCCGGGCC +
Preference number: 5 (lower is better)
Translates to: SHGVIEHNILFGKFQQHRFLRRV*IMNSRA
Trigger: GGCCCGGGAATTCATGATCAAAACCCGCCGTAGGAA...CCTATGTTGCTGGAACTTGCCAAACAGGATGTTGTGCTCAATTACCCCATGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000589769.1
CDS-3UTR CAA 90 bp ACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACAGCACAACATCCTGTTaGGCAAGTTCCAGCAACATA +
Preference number: 5 (lower is better)
Translates to: TKATSYEVSASSTGVAAHSTTSC*ASSSNI
Trigger: TATGTTGCTGGAACTTGCCAAACAGGATGTTGTGCT...GTGGGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp GTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACTCTCTGACAACAGCTCTGGGTTGGAGGTaGGTGAGTTGTTCAAGATGG +
Preference number: 5 (lower is better)
Translates to: VGELFKMATAASRHSLTTALGWR*VSCSRW
Trigger: CCATCTTGAACAACTCACCAACCTCCAACCCAGAGC...TGTTGTCAGAGAGTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp GCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGCTCCCAGGAGTCCCTAATAAAGCAGTTTaGAGGAAAATCAACAGACTC +
Preference number: 5 (lower is better)
Translates to: ASSTGVAAHCREQELPGVPNKAV*RKINRL
Trigger: GAGTCTGTTGATTTTCCTCAAAACTGCTTTATTAGG...GACTCCTGGGAGCTCCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426333.7
CDS TCA 90 bp AAGCCATTAATACATGCCTTCCCAGGGAGCACGAGCAGGAGTTACTaGGCCATTCACAATGGTCAAAAAGCTCAAAGTGCGGGGACTGAT +
Preference number: 5 (lower is better)
Translates to: KPLIHAFPGSTSRSY*AIHNGQKAQSAGTD
Trigger: ATCAGTCCCCGCACTTTGAGCTTTTTGACCATTGTGAATGGCTCAGTAACTCCTGCTCGTGCTCCCTGGGAAGGCATGTATTAATGGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000587914.1
CDS GCA 90 bp AAGCACAAAGGACTGAGGGCAACTGGCATGAGCAGGCACAGAAAGTaGAGAGGTATGAGAAGAGAAGAGGACTTGCTTAGGATCAGACTA +
Preference number: 5 (lower is better)
Translates to: KHKGLRATGMSRHRK*RGMRREEDLLRIRL
Trigger: TAGTCTGATCCTAAGCAAGTCCTCTTCTCTTCTCATACCTCTGCACTTTCTGTGCCTGCTCATGCCAGTTGCCCTCAGTCCTTTGTGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586276.5
CDS CCA 90 bp ATTGACCTCATCCACAATGTGGCGCAGCTTGTAATAAGCATCAGTTaGAGGCAGCTTCAGCTCCAGGATCAGCCGGTCAATCTTGTTGAT +
Preference number: 5 (lower is better)
Translates to: IDLIHNVAQLVISIS*RQLQLQDQPVNLVD
Trigger: ATCAACAAGATTGACCGGCTGATCCTGGAGCTGAAGCTGCCTCCAACTGATGCTTATTACAAGCTGCGCCACATTGTGGATGAGGTCAAT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000587957.1
ENST00000591382.5
ENST00000592576.5
ENST00000593200.5
CDS CCA 90 bp GAAAATCTGAGCCTGAGATCCAAAGCACAAAGGACTGAGGGCAACTaGCATGAGCAGGCACAGAAAGTGCAGAGGTATGAGAAGAGAAGA +
Preference number: 5 (lower is better)
Translates to: ENLSLRSKAQRTEGN*HEQAQKVQRYEKRR
Trigger: TCTTCTCTTCTCATACCTCTGCACTTTCTGTGCCTGCTCATGCCAGTTGCCCTCAGTCCTTTGTGCTTTGGATCTCAGGCTCAGATTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586276.5
CDS-3UTR CAA 90 bp CATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGAGTATAGCACAGATCTaGGTCATAGCGCTTTCTGAT +
Preference number: 5 (lower is better)
Translates to: HMRSQLQVQELQPTVGSRSIAQI*VIALSD
Trigger: ATCAGAAAGCGCTATGACCAAGATCTGTGCTATACT...CCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp GACAACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCATGTAATAAGCATCAGTaGGAGGCAGCTTCAGCTCCA +
Preference number: 5 (lower is better)
Translates to: DNTKATSYEVSASSTGVACNKHQ*EAASAP
Trigger: TGGAGCTGAAGCTGCCTCCAACTGATGCTTATTACA...TGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTTGTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp TGGGGCTCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCTGTCTTCACAATTGGTaGATCAACACCTTCAATCAG +
Preference number: 5 (lower is better)
Translates to: WGSGLEVGELFKMATAASCLHNW*INTFNQ
Trigger: CTGATTGAAGGTGTTGATCAACCAATTGTGAAGACA...GGAAGCTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGAGCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp GTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACTCTCTGACAACAAGATCCCAATCGTACTaGGTCTGGAAGAACTCTCCC +
Preference number: 5 (lower is better)
Translates to: VGELFKMATAASRHSLTTRSQSY*VWKNSP
Trigger: GGGAGAGTTCTTCCAGACCAAGTACGATTGGGATCT...TGTTGTCAGAGAGTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp GAGCAAGACAGAGGTCAGAATGTTCTGTTCACTTGCAAACCATGGCTAAGGTCATCCCCACTGGAAACCTaGAACGATGCTGTCCTTCAC +
Preference number: 5 (lower is better)
Translates to: EQDRGQNVLFTCKPWLRSSPLET*NDAVLH
Trigger: GTGAAGGACAGCATCGTTCAAGGTTTCCAGTGGGGA...TGACCTTAGCCATGGTTTGCAAGTGAACAGAACATTCTGACCTCTGTCTTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426333.7
ENST00000592576.5
CDS-3UTR CAA 90 bp CACTCACATGGGGTAATTGAGCACAACATCCTGTTTGGCAAGTTCCAGCAACATGCCGGGATAAAAGCTTaGATGGTGTACAGAGGGGAG +
Preference number: 5 (lower is better)
Translates to: HSHGVIEHNILFGKFQQHAGIKA*MVYRGE
Trigger: CTCCCCTCTGTACACCATCAAAGCTTTTATCCCGGC...ATGTTGCTGGAACTTGCCAAACAGGATGTTGTGCTCAATTACCCCATGTGAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000589769.1
CDS-3UTR CAA 90 bp ACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACGGATCATCGAAGAATTaGCTGATGCTCACATCTTCA +
Preference number: 5 (lower is better)
Translates to: TKATSYEVSASSTGVAAHGSSKN*LMLTSS
Trigger: TGAAGATGTGAGCATCAGCAAATTCTTCGATGATCC...GTGGGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp TCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACAGCACAACATCCTGTTaGGCAAGTTCCAGCAACATA +
Preference number: 5 (lower is better)
Translates to: SGLEVGELFKMATAASRHSTTSC*ASSSNI
Trigger: TATGTTGCTGGAACTTGCCAAACAGGATGTTGTGCT...GTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp GAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACTCTCTGACAACACGAAGGTTGGAGGTTGGTGAGTaGTTCAAGATGGCAACAGCA +
Preference number: 5 (lower is better)
Translates to: ELFKMATAASRHSLTTRRLEVGE*FKMATA
Trigger: TGCTGTTGCCATCTTGAACAACTCACCAACCTCCAA...CCTTCGTGTTGTCAGAGAGTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp AAGTGTTTCGTGAACTGTCAGATAAGTGGTTTCCCCAGGTTGTGTGGTCAGATGGGACGGGTGAAGGGTTaGATGCCAAGGGGCATTATT +
Preference number: 5 (lower is better)
Translates to: KCFVNCQISGFPRLCGQMGRVKG*MPRGII
Trigger: AATAATGCCCCTTGGCATCAAACCCTTCACCCGTCC...CATCTGACCACACAACCTGGGGAAACCACTTATCTGACAGTTCACGAAACACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426333.7
CDS-3UTR CAA 90 bp GTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACTCTCTGACAACAAGTGGTTTCCCCAGGTaGTGTGGTCAGATGCTTGAA +
Preference number: 5 (lower is better)
Translates to: VGELFKMATAASRHSLTTSGFPR*CGQMLE
Trigger: TTCAAGCATCTGACCACACAACCTGGGGAAACCACT...TGTTGTCAGAGAGTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426333.7
CDS TCA 90 bp GTGTCGTTCAAAATTCTGTTTCAGGTGCCACAGGTGGTTCATAGCTaGGAACTTCTAGCACTTTCCTTTCCAGGGTCCAGGCAGTTCCTT +
Preference number: 5 (lower is better)
Translates to: VSFKILFQVPQVVHS*ELLALSFPGSRQFL
Trigger: AAGGAACTGCCTGGACCCTGGAAAGGAAAGTGCTAGAAGTTCTCAGCTATGAACCACCTGTGGCACCTGAAACAGAATTTTGAACGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591856.1
CDS GCA 90 bp TCGGAAAATCTGAGCCTCCTCATTGCCTCGGGGTTCGGTTATGGTTaGTGTCTTCACAATTGGTTGATCAACACCTTCAATCAGAACCCA +
Preference number: 5 (lower is better)
Translates to: SENLSLLIASGFGYG*CLHNWLINTFNQNP
Trigger: TGGGTTCTGATTGAAGGTGTTGATCAACCAATTGTGAAGACAGCAACCATAACCGAACCCCGAGGCAATGAGGAGGCTCAGATTTTCCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590367.5
ENST00000591382.5
ENST00000592576.5
CDS GCA 90 bp CTTAAGCCAACCCAGTTGGTCTCTTCAGAAACTCTACCTCCTCATTaGCTCGGGGTTCGGTTATGGTTGCTGTCTTCACAATTGGTTGAT +
Preference number: 5 (lower is better)
Translates to: LKPTQLVSSETLPPH*LGVRLWLLSSQLVD
Trigger: ATCAACCAATTGTGAAGACAGCAACCATAACCGAACCCCGAGGCAATGAGGAGGTAGAGTTTCTGAAGAGACCAACTGGGTTGGCTTAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586276.5
CDS CCA 90 bp AGGGTCGGAAAATCTGAGCCTCCTCATTGCCTCGGGGTTCGGTTATaGTTGCTGTCTTCACAATTGGTTGATCAACACCTTCAATCAGAA +
Preference number: 5 (lower is better)
Translates to: RVGKSEPPHCLGVRL*LLSSQLVDQHLQSE
Trigger: TTCTGATTGAAGGTGTTGATCAACCAATTGTGAAGACAGCAACCATAACCGAACCCCGAGGCAATGAGGAGGCTCAGATTTTCCGACCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590367.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp GTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACTCTCTGACAACATCCACAAAACATGTCTaGCCATGGTGGAGATGTCCA +
Preference number: 5 (lower is better)
Translates to: VGELFKMATAASRHSLTTSTKHV*PWWRCP
Trigger: TGGACATCTCCACCATGGCAAGACATGTTTTGTGGA...TGTTGTCAGAGAGTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
CDS-3UTR CAA 90 bp TTGGTGTCTGGCAAGACCACTGTCACAGGAGTGCTTTTGATGCCTACACCTCTCAGTATAGCACAGATCTaGGTCATAGCGCTTTCTGAT +
Preference number: 5 (lower is better)
Translates to: LVSGKTTVTGVLLMPTPLSIAQI*VIALSD
Trigger: ATCAGAAAGCGCTATGACCAAGATCTGTGCTATACT...GAGAGGTGTAGGCATCAAAAGCACTCCTGTGACAGTGGTCTTGCCAGACACCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588374.1
CDS-3UTR CAA 90 bp GACAGAGGTCAGAATGTTCTGTTCACTTGCAAACCATGGCTAAGGTCAAACTTGGCCTACACCTCTCTCTaGCTCTGTGAAGAGGATGTC +
Preference number: 5 (lower is better)
Translates to: DRGQNVLFTCKPWLRSNLAYTSL*LCEEDV
Trigger: GACATCCTCTTCACAGAGCAAGAGAGAGGTGTAGGC...CAAGTTTGACCTTAGCCATGGTTTGCAAGTGAACAGAACATTCTGACCTCTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426333.7
ENST00000592576.5
CDS-3UTR CAA 90 bp GGCAGTGAAGCCTCTTGGGAGATGACATATATTCAGAATGTAAGCACCAGACGGATCAGCCGGTCAATCTaGTTGATGCACACAGTGACT +
Preference number: 5 (lower is better)
Translates to: GSEASWEMTYIQNVSTRRISRSI*LMHTVT
Trigger: AGTCACTGTGTGCATCAACAAGATTGACCGGCTGAT...CCGTCTGGTGCTTACATTCTGAATATATGTCATCTCCCAAGAGGCTTCACTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426333.7
CDS-3UTR CAA 90 bp TCTGACAACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTTGTAATAAGCATCAGTaGGAGGCAGCTTCAGCTCCA +
Preference number: 5 (lower is better)
Translates to: SDNTKATSYEVSASSTGVCNKHQ*EAASAP
Trigger: TGGAGCTGAAGCTGCCTCCAACTGATGCTTATTACA...AACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTTGTCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp TCCTCTCTCACTGGGGCTCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAAATGCTTATTAATCCATaGACCTCATCCACAATGTGG +
Preference number: 5 (lower is better)
Translates to: SSLTGALGWRLVSCSRWQMLINP*TSSTMW
Trigger: CCACATTGTGGATGAGGTCAATGGATTAATAAGCAT...TTGCCATCTTGAACAACTCACCAACCTCCAACCCAGAGCCCCAGTGAGAGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp CATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCCACTGTAGGGAGCAGGTGTCTTCACAATTGGTaGATCAACACCTTCAATCAG +
Preference number: 5 (lower is better)
Translates to: HMRSQLQVQELQPTVGSRCLHNW*INTFNQ
Trigger: CTGATTGAAGGTGTTGATCAACCAATTGTGAAGACA...CCTGCTCCCTACAGTGGGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp ACTGGGGCTCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTTTGCTGTCTTCACAATaGGTTGATCAACACCTTCAA +
Preference number: 5 (lower is better)
Translates to: TGALGWRLVSCSRWQQQLLLSSQ*VDQHLQ
Trigger: TTGAAGGTGTTGATCAACCAATTGTGAAGACAGCAA...AAGCTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGAGCCCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp TCCTCTCTCACTGGGGCTCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAAATAACAGATGTGGTATaGAACTTCAAGGGTCGGAAA +
Preference number: 5 (lower is better)
Translates to: SSLTGALGWRLVSCSRWQITDVV*NFKGRK
Trigger: TTTCCGACCCTTGAAGTTCAATACCACATCTGTTAT...TTGCCATCTTGAACAACTCACCAACCTCCAACCCAGAGCCCCAGTGAGAGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp GAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACTCTCTGACAACACGAAGGGGCTCCACAGCAATCTaGATAACAGATGTGGTATTG +
Preference number: 5 (lower is better)
Translates to: ELFKMATAASRHSLTTRRGSTAI*ITDVVL
Trigger: CAATACCACATCTGTTATCAAGATTGCTGTGGAGCC...CCTTCGTGTTGTCAGAGAGTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp AAAGGAGCAGAGCAAGACAGAGGTCAGAATGTTCTGTTCACTTGCAAACCATGGACTGGGTCAGCCACCTaGATGTCTATCTCTGAGTAC +
Preference number: 5 (lower is better)
Translates to: KGAEQDRGQNVLFTCKPWTGSAT*MSISEY
Trigger: GTACTCAGAGATAGACATCAAGGTGGCTGACCCAGT...CCATGGTTTGCAAGTGAACAGAACATTCTGACCTCTGTCTTGCTCTGCTCCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426333.7
ENST00000592576.5
CDS-3UTR CAA 90 bp GTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACTCTCTGACAACATTGGAGGTTGGTGAGTaGTTCAAGATGGCAACAGCA +
Preference number: 5 (lower is better)
Translates to: VGELFKMATAASRHSLTTLEVGE*FKMATA
Trigger: TGCTGTTGCCATCTTGAACAACTCACCAACCTCCAA...TGTTGTCAGAGAGTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAAC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp TCTGACAACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTTTGGAGGTTGGTGAGTaGTTCAAGATGGCAACAGCA +
Preference number: 5 (lower is better)
Translates to: SDNTKATSYEVSASSTGVLEVGE*FKMATA
Trigger: TGCTGTTGCCATCTTGAACAACTCACCAACCTCCAA...AACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTTGTCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp GGCTCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCAGAATCTCATCAAGATCTTaGGTCTCTCTACCCAATTCA +
Preference number: 5 (lower is better)
Translates to: GSGLEVGELFKMATAASRISSRS*VSLPNS
Trigger: TGAATTGGGTAGAGAGACCAAAGATCTTGATGAGAT...TCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp GACAACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGAATGTTCTGTTCACTaGCAAACCATGGCTAAGGTC +
Preference number: 5 (lower is better)
Translates to: DNTKATSYEVSASSTGVAECSVH*QTMAKV
Trigger: GACCTTAGCCATGGTTTGCAAGTGAACAGAACATTC...TGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTTGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp ACAACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGGAATGTTCTGTTCACTaGCAAACCATGGCTAAGGTC +
Preference number: 5 (lower is better)
Translates to: TTRRPRHMRSQLQVQELQECSVH*QTMAKV
Trigger: GACCTTAGCCATGGTTTGCAAGTGAACAGAACATTC...CTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS TCA 90 bp TGTTGGAAGGGCAACCATTTACCTAAGGGAATTCAGAAGCTCCCTTaGCACTACCTCTGTGAAAACCCCAACTGCCTTAATCAGCACAAG +
Preference number: 5 (lower is better)
Translates to: CWKGNHLPKGIQKLP*HYLCENPNCLNQHK
Trigger: CTTGTGCTGATTAAGGCAGTTGGGGTTTTCACAGAGGTAGTGTCAAGGGAGCTTCTGAATTCCCTTAGGTAAATGGTTGCCCTTCCAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588340.1
CDS GCA 90 bp CTTCAGAAACTCTACCTCCTCATTGCCTCGGGGTTCGGTTATGGTTaGTGTCTTCACAATTGGTTGATCAACACCTTCAATCAGAACCCA +
Preference number: 5 (lower is better)
Translates to: LQKLYLLIASGFGYG*CLHNWLINTFNQNP
Trigger: TGGGTTCTGATTGAAGGTGTTGATCAACCAATTGTGAAGACAGCAACCATAACCGAACCCCGAGGCAATGAGGAGGTAGAGTTTCTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586276.5
CDS-3UTR CAA 90 bp GAGCAAGACAGAGGTCAGAATGTTCTGTTCACTTGCAAACCATGGCTAAGGTCATCCACAAAACATGTCTaGCCATGGTGGAGATGTCCA +
Preference number: 5 (lower is better)
Translates to: EQDRGQNVLFTCKPWLRSSTKHV*PWWRCP
Trigger: TGGACATCTCCACCATGGCAAGACATGTTTTGTGGA...TGACCTTAGCCATGGTTTGCAAGTGAACAGAACATTCTGACCTCTGTCTTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426333.7
CDS-3UTR CAA 90 bp GAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACTCTCTGACAACACGAAGGAGTATAGCACAGATCTaGGTCATAGCGCTTTCTGAT +
Preference number: 5 (lower is better)
Translates to: ELFKMATAASRHSLTTRRSIAQI*VIALSD
Trigger: ATCAGAAAGCGCTATGACCAAGATCTGTGCTATACT...CCTTCGTGTTGTCAGAGAGTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp AAGTGTTTCGTGAACTGTCAGATAAGTGGTTTCCCCAGGTTGTGTGGTCAGATGCTAGTTGGGGCCTTTTaGGTGAACTTTCGCGTCTTA +
Preference number: 5 (lower is better)
Translates to: KCFVNCQISGFPRLCGQMLVGAF*VNFRVL
Trigger: TAAGACGCGAAAGTTCACCAAAAAGGCCCCAACTAG...CATCTGACCACACAACCTGGGGAAACCACTTATCTGACAGTTCACGAAACACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000426333.7
CDS-3UTR CAA 90 bp AAAGGAGCAGAGCAAGACAGAGGTCAGAATGTTCTGTTCACTTGCAAACCATGGGGGGTTCGGTTATGGTaGCTGTCTTCACAATTGGTT +
Preference number: 5 (lower is better)
Translates to: KGAEQDRGQNVLFTCKPWGVRLW*LSSQLV
Trigger: AACCAATTGTGAAGACAGCAACCATAACCGAACCCC...CCATGGTTTGCAAGTGAACAGAACATTCTGACCTCTGTCTTGCTCTGCTCCTTT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000426333.7
ENST00000592576.5
CDS-3UTR CAA 90 bp TCTGGGTTGGAGGTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACATAACAGATGTGGTATaGAACTTCAAGGGTCGGAAA +
Preference number: 5 (lower is better)
Translates to: SGLEVGELFKMATAASRHITDVV*NFKGRK
Trigger: TTTCCGACCCTTGAAGTTCAATACCACATCTGTTAT...GTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAACCTCCAACCCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp AGGTCAGAATGTTCTGTTCACTTGCAAACCATGGCTAAGGTCAAACTTGTAGAATTCCTACGGCGGGTTTaGATCATGAATTCCCGGGCC +
Preference number: 5 (lower is better)
Translates to: RSECSVHLQTMAKVKLVEFLRRV*IMNSRA
Trigger: GGCCCGGGAATTCATGATCAAAACCCGCCGTAGGAA...TTCTACAAGTTTGACCTTAGCCATGGTTTGCAAGTGAACAGAACATTCTGACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426333.7
ENST00000592576.5
CDS-3UTR CAA 90 bp ATCATCGAAGAATTTGCTGATGCTCACATCTTCACTGAGGCCCTTCCTACGGCGGGATCATCGAAGAATTaGCTGATGCTCACATCTTCA +
Preference number: 5 (lower is better)
Translates to: IIEEFADAHIFTEALPTAGSSKN*LMLTSS
Trigger: TGAAGATGTGAGCATCAGCAAATTCTTCGATGATCC...CGCCGTAGGAAGGGCCTCAGTGAAGATGTGAGCATCAGCAAATTCTTCGATGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589769.1
CDS-3UTR CAA 90 bp GAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACTCTCTGACAACACGAAGGGGATCATCGAAGAATTaGCTGATGCTCACATCTTCA +
Preference number: 5 (lower is better)
Translates to: ELFKMATAASRHSLTTRRGSSKN*LMLTSS
Trigger: TGAAGATGTGAGCATCAGCAAATTCTTCGATGATCC...CCTTCGTGTTGTCAGAGAGTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp ACAACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGGGATCATCGAAGAATTaGCTGATGCTCACATCTTCA +
Preference number: 5 (lower is better)
Translates to: TTRRPRHMRSQLQVQELQGSSKN*LMLTSS
Trigger: TGAAGATGTGAGCATCAGCAAATTCTTCGATGATCC...CTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp GGCAGTGAAGCCTCTTGGGAGATGACATATATTCAGAATGTAAGCACCAGACGGAGCACAACATCCTGTTaGGCAAGTTCCAGCAACATA +
Preference number: 5 (lower is better)
Translates to: GSEASWEMTYIQNVSTRRSTTSC*ASSSNI
Trigger: TATGTTGCTGGAACTTGCCAAACAGGATGTTGTGCT...CCGTCTGGTGCTTACATTCTGAATATATGTCATCTCCCAAGAGGCTTCACTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426333.7
CDS-3UTR CAA 90 bp GTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACTCTCTGACAACAAGCACAACATCCTGTTaGGCAAGTTCCAGCAACATA +
Preference number: 5 (lower is better)
Translates to: VGELFKMATAASRHSLTTSTTSC*ASSSNI
Trigger: TATGTTGCTGGAACTTGCCAAACAGGATGTTGTGCT...TGTTGTCAGAGAGTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAAC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp AAAGGAGCAGAGCAAGACAGAGGTCAGAATGTTCTGTTCACTTGCAAACCATGGTTGGAGGTTGGTGAGTaGTTCAAGATGGCAACAGCA +
Preference number: 5 (lower is better)
Translates to: KGAEQDRGQNVLFTCKPWLEVGE*FKMATA
Trigger: TGCTGTTGCCATCTTGAACAACTCACCAACCTCCAA...CCATGGTTTGCAAGTGAACAGAACATTCTGACCTCTGTCTTGCTCTGCTCCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426333.7
ENST00000592576.5
CDS-3UTR CAA 90 bp AACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTGCAGCCATCTCATCAAGATCTTaGGTCTCTCTACCCAATTCA +
Preference number: 5 (lower is better)
Translates to: NTKATSYEVSASSTGVAAISSRS*VSLPNS
Trigger: TGAATTGGGTAGAGAGACCAAAGATCTTGATGAGAT...GGCTGCAACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp GTGAACTGTCAGATAAGTGGTTTCCCCAGGTTGTGTGGTCAGATGCTTGAAGCAGAATGTTCTGTTCACTaGCAAACCATGGCTAAGGTC +
Preference number: 5 (lower is better)
Translates to: VNCQISGFPRLCGQMLEAECSVH*QTMAKV
Trigger: GACCTTAGCCATGGTTTGCAAGTGAACAGAACATTC...TGCTTCAAGCATCTGACCACACAACCTGGGGAAACCACTTATCTGACAGTTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426333.7
CDS TCA 90 bp AGGAAAATAATAAAAGGCACCCGTCCTAATTCCTCGCATCTGAACTaGGTACAGGGAGAATCCAGCAGGGTCATATCTAGAAGGCTAAGC +
Preference number: 5 (lower is better)
Translates to: RKIIKGTRPNSSHLN*VQGESSRVISRRLS
Trigger: GCTTAGCCTTCTAGATATGACCCTGCTGGATTCTCCCTGTACTCAGTTCAGATGCGAGGAATTAGGACGGGTGCCTTTTATTATTTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586276.5
CDS CCA 90 bp GTCTCTTCAGAAACTCTACCTCCTCATTGCCTCGGGGTTCGGTTATaGTTGCTGTCTTCACAATTGGTTGATCAACACCTTCAATCAGAA +
Preference number: 5 (lower is better)
Translates to: VSSETLPPHCLGVRL*LLSSQLVDQHLQSE
Trigger: TTCTGATTGAAGGTGTTGATCAACCAATTGTGAAGACAGCAACCATAACCGAACCCCGAGGCAATGAGGAGGTAGAGTTTCTGAAGAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586276.5
CDS-3UTR CAA 90 bp AGGTCAGAATGTTCTGTTCACTTGCAAACCATGGCTAAGGTCAAACTTGTAGAAACACCTCCTCGGCTGTaGGGTAGTACTTCTTGTCCT +
Preference number: 5 (lower is better)
Translates to: RSECSVHLQTMAKVKLVETPPRL*GSTSCP
Trigger: AGGACAAGAAGTACTACCCAACAGCCGAGGAGGTGT...TTCTACAAGTTTGACCTTAGCCATGGTTTGCAAGTGAACAGAACATTCTGACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426333.7
ENST00000592576.5
CDS-3UTR CAA 90 bp AACAATCCACAAAACATGTCTTGCCATGGTGGAGATGTCCACAAAGGGTCACATTCCACAAAACATGTCTaGCCATGGTGGAGATGTCCA +
Preference number: 5 (lower is better)
Translates to: NNPQNMSCHGGDVHKGSHSTKHV*PWWRCP
Trigger: TGGACATCTCCACCATGGCAAGACATGTTTTGTGGA...ATGTGACCCTTTGTGGACATCTCCACCATGGCAAGACATGTTTTGTGGATTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588374.1
CDS-3UTR CAA 90 bp GGCAGTGAAGCCTCTTGGGAGATGACATATATTCAGAATGTAAGCACCAGACGGAGTATAGCACAGATCTaGGTCATAGCGCTTTCTGAT +
Preference number: 5 (lower is better)
Translates to: GSEASWEMTYIQNVSTRRSIAQI*VIALSD
Trigger: ATCAGAAAGCGCTATGACCAAGATCTGTGCTATACT...CCGTCTGGTGCTTACATTCTGAATATATGTCATCTCCCAAGAGGCTTCACTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426333.7
CDS-3UTR CAA 90 bp GAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACTCTCTGACAACACGAAGGTTGCTGTCTTCACAATaGGTTGATCAACACCTTCAA +
Preference number: 5 (lower is better)
Translates to: ELFKMATAASRHSLTTRRLLSSQ*VDQHLQ
Trigger: TTGAAGGTGTTGATCAACCAATTGTGAAGACAGCAA...CCTTCGTGTTGTCAGAGAGTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS TCA 90 bp CTTGTGCAAGACACTCAGTTTTGCCAACAGCCTGGTCCAAGAAAGTaGCATGATGGAGCTGTTCCCCTAATTCCCAATAACAAGTTGATT +
Preference number: 5 (lower is better)
Translates to: LVQDTQFCQQPGPRK*HDGAVPLIPNNKLI
Trigger: AATCAACTTGTTATTGGGAATTAGGGGAACAGCTCCATCATGTCACTTTCTTGGACCAGGCTGTTGGCAAAACTGAGTGTCTTGCACAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590367.5
CDS TCA 90 bp CTAAAACATGAGCAGGTACAAAAGAGAAATCCTGTTCCAAGTAGCTaGAAGTTCCGTCTTACCTTGCCATGGTGGAGATGTCCACAAAGG +
Preference number: 5 (lower is better)
Translates to: LKHEQVQKRNPVPSS*KFRLTLPWWRCPQR
Trigger: CCTTTGTGGACATCTCCACCATGGCAAGGTAAGACGGAACTTTCAGCTACTTGGAACAGGATTTCTCTTTTGTACCTGCTCATGTTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000589825.5
CDS-3UTR CAA 90 bp TCTGACAACACGAAGGCCACGTCATATGAGGTCTCAGCTTCAAGTACAGGAGTTATGCTTATTAATCCATaGACCTCATCCACAATGTGG +
Preference number: 5 (lower is better)
Translates to: SDNTKATSYEVSASSTGVMLINP*TSSTMW
Trigger: CCACATTGTGGATGAGGTCAATGGATTAATAAGCAT...AACTCCTGTACTTGAAGCTGAGACCTCATATGACGTGGCCTTCGTGTTGTCAGA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp GTTGGTGAGTTGTTCAAGATGGCAACAGCAGCTTCCAGACACTCTCTGACAACAATAACAGATGTGGTATaGAACTTCAAGGGTCGGAAA +
Preference number: 5 (lower is better)
Translates to: VGELFKMATAASRHSLTTITDVV*NFKGRK
Trigger: TTTCCGACCCTTGAAGTTCAATACCACATCTGTTAT...TGTTGTCAGAGAGTGTCTGGAAGCTGCTGTTGCCATCTTGAACAACTCACCAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp GTTCACTTGCAAACCATGGCTAAGGTCAAACTTGTAGAAAATAAAATTCCATGTAGGCCATCAAGCATCTaGGGCAGCTCTGAGGGGTTG +
Preference number: 5 (lower is better)
Translates to: VHLQTMAKVKLVENKIPCRPSSI*GSSEGL
Trigger: CAACCCCTCAGAGCTGCCCAAGATGCTTGATGGCCT...ACATGGAATTTTATTTTCTACAAGTTTGACCTTAGCCATGGTTTGCAAGTGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp GTTCACTTGCAAACCATGGCTAAGGTCAAACTTGTAGAAAATAAAATTCCATGTCGGATGACAATGCTCTaGTCCAGGGGATCACCAGGC +
Preference number: 5 (lower is better)
Translates to: VHLQTMAKVKLVENKIPCRMTML*SRGSPG
Trigger: GCCTGGTGATCCCCTGGACAAGAGCATTGTCATCCG...ACATGGAATTTTATTTTCTACAAGTTTGACCTTAGCCATGGTTTGCAAGTGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp GAGCAAGACAGAGGTCAGAATGTTCTGTTCACTTGCAAACCATGGCTAAGGTCAGGATCATCGAAGAATTaGCTGATGCTCACATCTTCA +
Preference number: 5 (lower is better)
Translates to: EQDRGQNVLFTCKPWLRSGSSKN*LMLTSS
Trigger: TGAAGATGTGAGCATCAGCAAATTCTTCGATGATCC...TGACCTTAGCCATGGTTTGCAAGTGAACAGAACATTCTGACCTCTGTCTTGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426333.7
ENST00000592576.5
CDS-3UTR CAA 90 bp GAGCAAGACAGAGGTCAGAATGTTCTGTTCACTTGCAAACCATGGCTAAGGTCATGTCTTCACAATTGGTaGATCAACACCTTCAATCAG +
Preference number: 5 (lower is better)
Translates to: EQDRGQNVLFTCKPWLRSCLHNW*INTFNQ
Trigger: CTGATTGAAGGTGTTGATCAACCAATTGTGAAGACA...TGACCTTAGCCATGGTTTGCAAGTGAACAGAACATTCTGACCTCTGTCTTGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426333.7
ENST00000592576.5
CDS-3UTR CAA 90 bp GAGCAAGACAGAGGTCAGAATGTTCTGTTCACTTGCAAACCATGGCTAAGGTCAATAACAGATGTGGTATaGAACTTCAAGGGTCGGAAA +
Preference number: 5 (lower is better)
Translates to: EQDRGQNVLFTCKPWLRSITDVV*NFKGRK
Trigger: TTTCCGACCCTTGAAGTTCAATACCACATCTGTTAT...TGACCTTAGCCATGGTTTGCAAGTGAACAGAACATTCTGACCTCTGTCTTGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426333.7
ENST00000592576.5
CDS-3UTR CAA 90 bp GTTCACTTGCAAACCATGGCTAAGGTCAAACTTGTAGAAAATAAAATTCCATGTACACCTCCTCGGCTGTaGGGTAGTACTTCTTGTCCT +
Preference number: 5 (lower is better)
Translates to: VHLQTMAKVKLVENKIPCTPPRL*GSTSCP
Trigger: AGGACAAGAAGTACTACCCAACAGCCGAGGAGGTGT...ACATGGAATTTTATTTTCTACAAGTTTGACCTTAGCCATGGTTTGCAAGTGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp GTTCACTTGCAAACCATGGCTAAGGTCAAACTTGTAGAAAATAAAATTCCATGTAGCCGGTCAATCTTGTaGATGCACACAGTGACTGCC +
Preference number: 5 (lower is better)
Translates to: VHLQTMAKVKLVENKIPCSRSIL*MHTVTA
Trigger: GGCAGTCACTGTGTGCATCAACAAGATTGACCGGCT...ACATGGAATTTTATTTTCTACAAGTTTGACCTTAGCCATGGTTTGCAAGTGAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp AACAATCCACAAAACATGTCTTGCCATGGTGGAGATGTCCACAAAGGGTCACATTTCTCATCAAGATCTTaGGTCTCTCTACCCAATTCA +
Preference number: 5 (lower is better)
Translates to: NNPQNMSCHGGDVHKGSHFSSRS*VSLPNS
Trigger: TGAATTGGGTAGAGAGACCAAAGATCTTGATGAGAA...ATGTGACCCTTTGTGGACATCTCCACCATGGCAAGACATGTTTTGTGGATTGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588374.1
CDS GCA 90 bp AGATCCGCCAAGAAATCCATCTCATACACCGTAACAGGTAATGTCTaGTCCATCAGAGTGAATTTCTTGGTTTTCACTGGCTTAATAATG +
Preference number: 5 (lower is better)
Translates to: RSAKKSISYTVTGNV*SIRVNFLVFTGLIM
Trigger: CATTATTAAGCCAGTGAAAACCAAGAAATTCACTCTGATGGAGCAGACATTACCTGTTACGGTGTATGAGATGGATTTCTTGGCGGATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000588374.1
ENST00000589825.5
ENST00000591382.5
ENST00000592576.5
ENST00000593072.5
CDS-3UTR CAA 90 bp GTTCACTTGCAAACCATGGCTAAGGTCAAACTTGTAGAAAATAAAATTCCATGTGTCACAGGAGTGCTTTaGATGCCTACACCTCTCTCT +
Preference number: 5 (lower is better)
Translates to: VHLQTMAKVKLVENKIPCVTGVL*MPTPLS
Trigger: AGAGAGAGGTGTAGGCATCAAAAGCACTCCTGTGAC...ACATGGAATTTTATTTTCTACAAGTTTGACCTTAGCCATGGTTTGCAAGTGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS-3UTR CAA 90 bp GTTCACTTGCAAACCATGGCTAAGGTCAAACTTGTAGAAAATAAAATTCCATGTAGTATAGCACAGATCTaGGTCATAGCGCTTTCTGAT +
Preference number: 5 (lower is better)
Translates to: VHLQTMAKVKLVENKIPCSIAQI*VIALSD
Trigger: ATCAGAAAGCGCTATGACCAAGATCTGTGCTATACT...ACATGGAATTTTATTTTCTACAAGTTTGACCTTAGCCATGGTTTGCAAGTGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000426333.7
ENST00000591382.5
ENST00000592576.5
CDS CCA 90 bp CTTACTGTCCCAAATTTCCTCTTAAGATGTAACTCAATTCTCAACTaGCTGTGTATTTATGATAAGAAACTAGACAGCCTAAGAAATGGC +
Preference number: 5 (lower is better)
Translates to: LTVPNFLLRCNSILN*LCIYDKKLDSLRNG
Trigger: GCCATTTCTTAGGCTGTCTAGTTTCTTATCATAAATACACAGCCAGTTGAGAATTGAGTTACATCTTAAGAGGAAATTTGGGACAGTAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586276.5
CDS TCA 72 bp ATGGTGTACAGAGGGGAGCCTGGGATGGGTGCATCCTaGGTCACGTGCCCCCTGCGCCTGGCCAGGACGGTA +
Preference number: 6 (lower is better)
Translates to: MVYRGEPGMGAS*VTCPLRLARTV
Trigger: TACCGTCCTGGCCAGGCGCAGGGGGCACGTGACTCAGGATGCACCCATCCCAGGCTCCCCTCTGTACACCAT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000586276.5
ENST00000590367.5
ENST00000591382.5
ENST00000592576.5
CDS GCA 72 bp CACGTGCCCCCTGCGCCTGGCCAGGACGGTATAAACTaGAGAGACGCAATCTGCAGGGGCCTGGACCTCTAC +
Preference number: 6 (lower is better)
Translates to: HVPPAPGQDGIN*RDAICRGLDLY
Trigger: GTAGAGGTCCAGGCCCCTGCAGATTGCGTCTCTGCAGTTTATACCGTCCTGGCCAGGCGCAGGGGGCACGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000586276.5
ENST00000590367.5
ENST00000591382.5
ENST00000592576.5
CDS GCA 72 bp GCTGAAACAGAGACAGTGGTGAACACAGTGCCAGGCTaGAGCAGCCCGGACGCACTGCCAAGGGGAAGGGCA +
Preference number: 6 (lower is better)
Translates to: AETETVVNTVPG*SSPDALPRGRA
Trigger: TGCCCTTCCCCTTGGCAGTGCGTCCGGGCTGCTGCAGCCTGGCACTGTGTTCACCACTGTCTCTGTTTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590367.5
CDS GCA 72 bp CCCCCAGTACCTTCACAGGCTGCCCAGCATGAATGGTaGCACTCAGCACCCGGCCAAAGGCGTGAAACTGGA +
Preference number: 6 (lower is better)
Translates to: PPVPSQAAQHEW*HSAPGQRRETG
Trigger: TCCAGTTTCACGCCTTTGGCCGGGTGCTGAGTGGCACCATTCATGCTGGGCAGCCTGTGAAGGTACTGGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000585616.5
ENST00000585794.5
ENST00000586276.5
ENST00000587914.1
ENST00000590367.5
ENST00000591382.5
ENST00000592576.5
CDS CAA 90 bp AGCCCCGAAATCGAGGTGTGTGCGTGTGTGCGCGCTTCGGAAGCCTaGGGAAGGCACGAGGACGACAGGGTCTTCCATTCTTTTTCCCGC +
Preference number: 6 (lower is better)
Translates to: SPEIEVCACVRASEA*GRHEDDRVFHSFSR
Trigger: GCGGGAAAAAGAATGGAAGACCCTGTCGTCCTCGTGCCTTCCCAAGGCTTCCGAAGCGCGCACACACGCACACACCTCGATTTCGGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000591382.5
CDS TCA 72 bp ATGGTGTACAGAGGGGAGCCTGGGATGGGTGCATCCTaGGTCACGTGCCCCCATGAGGAAGGCAGAGTAGAC +
Preference number: 6 (lower is better)
Translates to: MVYRGEPGMGAS*VTCPHEEGRVD
Trigger: GTCTACTCTGCCTTCCTCATGGGGGCACGTGACTCAGGATGCACCCATCCCAGGCTCCCCTCTGTACACCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000589769.1
ENST00000590977.5
CDS GCA 72 bp ATGCACACAGTGACTGCCAGCCTCTCCTGCACCGCATaGTTGATCAGCCGCTCTGTGTTCAGCATCACCCCC +
Preference number: 6 (lower is better)
Translates to: MHTVTASLSCTA*LISRSVFSITP
Trigger: GGGGGTGATGCTGAACACAGAGCGGCTGATCAAGCATGCGGTGCAGGAGAGGCTGGCAGTCACTGTGTGCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000587957.1
ENST00000591382.5
ENST00000592576.5
ENST00000593200.5
CDS GCA 72 bp GGTACCTGGCCACAGAGATCCAAAGGCGGCCCACGGTaGATATCTGGGAGTCTTCCTCATCCTCCAGGGTGT +
Preference number: 6 (lower is better)
Translates to: GTWPQRSKGGPR*ISGSLPHPPGC
Trigger: ACACCCTGGAGGATGAGGAAGACTCCCAGATATGCACCGTGGGCCGCCTTTGGATCTCTGTGGCCAGGTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000585616.5
ENST00000586276.5
ENST00000590367.5
ENST00000591382.5
ENST00000592576.5
CDS CCA 72 bp TCTCCCCCAGTACCTTCACAGGCTGCCCAGCATGAATaGTGCCACTCAGCACCCGGCCAAAGGCGTGAAACT +
Preference number: 6 (lower is better)
Translates to: SPPVPSQAAQHE*CHSAPGQRRET
Trigger: AGTTTCACGCCTTTGGCCGGGTGCTGAGTGGCACCATTCATGCTGGGCAGCCTGTGAAGGTACTGGGGGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000585616.5
ENST00000585794.5
ENST00000586276.5
ENST00000587914.1
ENST00000590367.5
ENST00000591382.5
ENST00000592576.5
CDS CCA 72 bp TGTTGGGGCCAGTCGCATCAGGGCCAAAAGCCCAGATaGAACGGGCAGCCAGCAGATCCCAATCGTACTTGG +
Preference number: 6 (lower is better)
Translates to: CWGQSHQGQKPR*NGQPADPNRTW
Trigger: CCAAGTACGATTGGGATCTGCTGGCTGCCCGTTCCATCTGGGCTTTTGGCCCTGATGCGACTGGCCCCAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000586276.5
ENST00000589769.1
ENST00000590124.5
ENST00000590367.5
ENST00000590977.5
ENST00000591382.5
ENST00000592576.5
CDS CCA 72 bp ATCCTAAAGATGGTGAGCCCATCCCACTCATATGCCTaGCTGCAAGGACCCTCGAGGACTGGGGTGGGGGAG +
Preference number: 6 (lower is better)
Translates to: ILKMVSPSHSYA*LQGPSRTGVGE
Trigger: CTCCCCCACCCCAGTCCTCGAGGGTCCTTGCAGCCAGGCATATGAGTGGGATGGGCTCACCATCTTTAGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000586276.5
ENST00000590367.5
ENST00000590977.5
CDS CCA 72 bp GGTGGATGCCAAGCTCGTCTAGGGTCCGTGGGAGGCTaGTGTCCACGTCACCTACAACCCTTCAAACCACAG +
Preference number: 6 (lower is better)
Translates to: GGCQARLGSVGG*CPRHLQPFKPQ
Trigger: CTGTGGTTTGAAGGGTTGTAGGTGACGTGGACACCAGCCTCCCACGGACCCTAGACGAGCTTGGCATCCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585616.5
CDS CCA 72 bp TCGAGGTGTGTGCGTGTGTGCGCGCTTCGGAAGCCTTaGGAAGGCACGAGGACGACAGGGTCTTCCATTCTT +
Preference number: 6 (lower is better)
Translates to: SRCVRVCALRKP*EGTRTTGSSIL
Trigger: AAGAATGGAAGACCCTGTCGTCCTCGTGCCTTCCCAAGGCTTCCGAAGCGCGCACACACGCACACACCTCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591382.5
CDS CAA 72 bp CACACAGTGACTGCCAGCCTCTCCTGCACCGCATGCTaGATCAGCCGCTCTGTGTTCAGCATCACCCCCTCA +
Preference number: 6 (lower is better)
Translates to: HTVTASLSCTAC*ISRSVFSITPS
Trigger: TGAGGGGGTGATGCTGAACACAGAGCGGCTGATCAAGCATGCGGTGCAGGAGAGGCTGGCAGTCACTGTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000587957.1
ENST00000591382.5
ENST00000592576.5
ENST00000593200.5
CDS CAA 90 bp GCATCAGTTGGAGGCAGCTTCAGCTCCAGGATCAGCCGGTCAATCTaGTTGATGCACACAGTGACTGCCAGCCTCTCCTGCACCGCATGC +
Preference number: 6 (lower is better)
Translates to: ASVGGSFSSRISRSI*LMHTVTASLSCTAC
Trigger: GCATGCGGTGCAGGAGAGGCTGGCAGTCACTGTGTGCATCAACAAGATTGACCGGCTGATCCTGGAGCTGAAGCTGCCTCCAACTGATGC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000587957.1
ENST00000591382.5
ENST00000592576.5
ENST00000593200.5
CDS TCA 72 bp CAGAGGGGGCCCTCCCTGGTTCCCCACTGGAAACCTTaGACGATGCTGTCCTTCACTGAACCAAGAAGAGCC +
Preference number: 6 (lower is better)
Translates to: QRGPSLVPHWKP*TMLSFTEPRRA
Trigger: GGCTCTTCTTGGTTCAGTGAAGGACAGCATCGTTCAAGGTTTCCAGTGGGGAACCAGGGAGGGCCCCCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000586276.5
ENST00000589769.1
ENST00000590124.5
ENST00000590367.5
ENST00000590977.5
ENST00000591382.5
ENST00000592576.5
CDS GCA 72 bp GGCCCAGGACTTGGGATGGTCCTGTGTACCCCAAGCTaGTTCTCCTGCCGAATCCTAAAGATGGTGAGCCCA +
Preference number: 6 (lower is better)
Translates to: GPGLGMVLCTPS*FSCRILKMVSP
Trigger: TGGGCTCACCATCTTTAGGATTCGGCAGGAGAAGCAGCTTGGGGTACACAGGACCATCCCAAGTCCTGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586276.5
ENST00000590367.5
ENST00000590977.5
CDS CCA 72 bp CCACACCACCGGTGTAGGTGTGCTCAATCTTGGGCTTaGCGCCCACCTTTGGAGAAGGGATATGCTGCACAC +
Preference number: 6 (lower is better)
Translates to: PHHRCRCAQSWA*RPPLEKGYAAH
Trigger: GTGTGCAGCATATCCCTTCTCCAAAGGTGGGCGCCAAGCCCAAGATTGAGCACACCTACACCGGTGGTGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000585616.5
ENST00000585794.5
ENST00000586654.5
ENST00000587914.1
ENST00000590367.5
ENST00000591382.5
ENST00000592576.5
CDS CCA 72 bp CGGAGTCCACACCACCGGTGTAGGTGTGCTCAATCTTaGGCTTGGCGCCCACCTTTGGAGAAGGGATATGCT +
Preference number: 6 (lower is better)
Translates to: RSPHHRCRCAQS*AWRPPLEKGYA
Trigger: AGCATATCCCTTCTCCAAAGGTGGGCGCCAAGCCCAAGATTGAGCACACCTACACCGGTGGTGTGGACTCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000585616.5
ENST00000585794.5
ENST00000586654.5
ENST00000587914.1
ENST00000590367.5
ENST00000591382.5
ENST00000592576.5
CDS CCA 72 bp CATATGCCTGGCTGCAAGGACCCTCGAGGACTGGGGTaGGGGAGTGCTGGTGGACTTACATTCATCACAGAG +
Preference number: 6 (lower is better)
Translates to: HMPGCKDPRGLG*GSAGGLTFITE
Trigger: CTCTGTGATGAATGTAAGTCCACCAGCACTCCCCCACCCCAGTCCTCGAGGGTCCTTGCAGCCAGGCATATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000586276.5
ENST00000590367.5
ENST00000590977.5
CDS CCA 72 bp CCACTCATATGCCTGGCTGCAAGGACCCTCGAGGACTaGGGTGGGGGAGTGCTGGTGGACTTACATTCATCA +
Preference number: 6 (lower is better)
Translates to: PLICLAARTLED*GGGVLVDLHSS
Trigger: TGATGAATGTAAGTCCACCAGCACTCCCCCACCCCAGTCCTCGAGGGTCCTTGCAGCCAGGCATATGAGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000586276.5
ENST00000590367.5
ENST00000590977.5
CDS CAA 72 bp GGCAGCTTCAGCTCCAGGATCAGCCGGTCAATCTTGTaGATGCACACAGTGACTGCCAGCCTCTCCTGCACC +
Preference number: 6 (lower is better)
Translates to: GSFSSRISRSIL*MHTVTASLSCT
Trigger: GGTGCAGGAGAGGCTGGCAGTCACTGTGTGCATCAACAAGATTGACCGGCTGATCCTGGAGCTGAAGCTGCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000587957.1
ENST00000591382.5
ENST00000592576.5
ENST00000593200.5
CDS CAA 72 bp GGAGGCAGCTTCAGCTCCAGGATCAGCCGGTCAATCTaGTTGATGCACACAGTGACTGCCAGCCTCTCCTGC +
Preference number: 6 (lower is better)
Translates to: GGSFSSRISRSI*LMHTVTASLSC
Trigger: GCAGGAGAGGCTGGCAGTCACTGTGTGCATCAACAAGATTGACCGGCTGATCCTGGAGCTGAAGCTGCCTCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000587957.1
ENST00000591382.5
ENST00000592576.5
ENST00000593200.5
CDS CAA 90 bp TTGTTGATGCACACAGTGACTGCCAGCCTCTCCTGCACCGCATGCTaGATCAGCCGCTCTGTGTTCAGCATCACCCCCTCAGCAGCATCA +
Preference number: 6 (lower is better)
Translates to: LLMHTVTASLSCTAC*ISRSVFSITPSAAS
Trigger: TGATGCTGCTGAGGGGGTGATGCTGAACACAGAGCGGCTGATCAAGCATGCGGTGCAGGAGAGGCTGGCAGTCACTGTGTGCATCAACAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000587957.1
ENST00000591382.5
ENST00000592576.5
ENST00000593200.5
CDS CAA 90 bp TCAGTTGGAGGCAGCTTCAGCTCCAGGATCAGCCGGTCAATCTTGTaGATGCACACAGTGACTGCCAGCCTCTCCTGCACCGCATGCTTG +
Preference number: 6 (lower is better)
Translates to: SVGGSFSSRISRSIL*MHTVTASLSCTACL
Trigger: CAAGCATGCGGTGCAGGAGAGGCTGGCAGTCACTGTGTGCATCAACAAGATTGACCGGCTGATCCTGGAGCTGAAGCTGCCTCCAACTGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000587957.1
ENST00000591382.5
ENST00000592576.5
ENST00000593200.5
CDS CAA 90 bp CACCACCGGTGTAGGTGTGCTCAATCTTGGGCTTGGCGCCCACCTTaGGAGAAGGGATATGCTGCACACACATGTCCACAAAGCCTGTGG +
Preference number: 6 (lower is better)
Translates to: HHRCRCAQSWAWRPP*EKGYAAHTCPQSLW
Trigger: CCACAGGCTTTGTGGACATGTGTGTGCAGCATATCCCTTCTCCAAAGGTGGGCGCCAAGCCCAAGATTGAGCACACCTACACCGGTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587914.1
CDS CAA 90 bp CGGTGCAGGGGCTCCTGGGCAACCACCGCATCCAGGATCTTAAACTaGACATTCCGAATCACTGTAAAGGAGGTGGAGGGAGTGACTGGG +
Preference number: 6 (lower is better)
Translates to: RCRGSWATTASRILN*TFRITVKEVEGVTG
Trigger: CCCAGTCACTCCCTCCACCTCCTTTACAGTGATTCGGAATGTCAAGTTTAAGATCCTGGATGCGGTGGTTGCCCAGGAGCCCCTGCACCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586276.5
ENST00000590367.5
ENST00000590977.5
CDS GCA 72 bp AATCATGCATCACACAGTCCAGGTAGAGCTCCCCAGTaGCCAGGATCACATGCTCGCCAGACTCCTCCACCT +
Preference number: 6 (lower is better)
Translates to: NHASHSPGRAPQ*PGSHARQTPPP
Trigger: AGGTGGAGGAGTCTGGCGAGCATGTGATCCTGGGCACTGGGGAGCTCTACCTGGACTGTGTGATGCATGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000586276.5
ENST00000590367.5
ENST00000590977.5
ENST00000591382.5
ENST00000592576.5
CDS GCA 72 bp GGTATCCATGATGCTCACTGCCGCTTCCCGCTACAATaGAGGAGCTCAGAGGACTTCGGAGGGAACTTGGCA +
Preference number: 6 (lower is better)
Translates to: GIHDAHCRFPLQ*RSSEDFGGNLA
Trigger: TGCCAAGTTCCCTCCGAAGTCCTCTGAGCTCCTGCATTGTAGCGGGAAGCGGCAGTGAGCATCATGGATACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591382.5
ENST00000593072.5
CDS CCA 72 bp GGTCTCCACCTCAGGACCATACACCTCCTCGGCTGTTaGGTAGTACTTCTTGTCCTCATGCAGCACCACCTC +
Preference number: 6 (lower is better)
Translates to: GLHLRTIHLLGC*VVLLVLMQHHL
Trigger: GAGGTGGTGCTGCATGAGGACAAGAAGTACTACCCAACAGCCGAGGAGGTGTATGGTCCTGAGGTGGAGACC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000589825.5
ENST00000591382.5
ENST00000592408.5
ENST00000592576.5
ENST00000592701.2
ENST00000593072.5
CDS CCA 72 bp ATGCTCGCCAGACTCCTCCACCTTGGTGGTGAGGGATaGATAGCTCTTGTTGACCTTGCGCAGGCCATCAAG +
Preference number: 6 (lower is better)
Translates to: MLARLLHLGGEG*IALVDLAQAIK
Trigger: CTTGATGGCCTGCGCAAGGTCAACAAGAGCTATCCATCCCTCACCACCAAGGTGGAGGAGTCTGGCGAGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000586276.5
ENST00000590367.5
ENST00000591382.5
ENST00000592576.5
CDS CCA 72 bp AGCGGCACGGATAGAAGAGGAAGTGAGCGAGGGGACTaGACAGTTAGAGCACCACTCCTACCTAGCGATACG +
Preference number: 6 (lower is better)
Translates to: SGTDRRGSERGD*TVRAPLLPSDT
Trigger: CGTATCGCTAGGTAGGAGTGGTGCTCTAACTGTCCAGTCCCCTCGCTCACTTCCTCTTCTATCCGTGCCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591382.5
CDS CAA 72 bp CGGTATCACAGCCACTCTCCAGCCCTCGGAAGGGACTaGTGCAAGACACTCAGTTTTGCCAACAGCCTGGTC +
Preference number: 6 (lower is better)
Translates to: RYHSHSPALGRD*CKTLSFANSLV
Trigger: GACCAGGCTGTTGGCAAAACTGAGTGTCTTGCACAAGTCCCTTCCGAGGGCTGGAGAGTGGCTGTGATACCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590367.5
CDS TCA 72 bp TGCAGCACCACCTCCATCCCAGGGTGGTCATCGTCATaGTCTCCTACGTCATCGTCGTCGTCATCATCATCC +
Preference number: 6 (lower is better)
Translates to: CSTTSIPGWSSS*SPTSSSSSSSS
Trigger: GGATGATGATGACGACGACGATGACGTAGGAGATCATGACGATGACCACCCTGGGATGGAGGTGGTGCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000589211.1
ENST00000589825.5
ENST00000591382.5
ENST00000592408.5
ENST00000592576.5
ENST00000592701.2
ENST00000593072.5
CDS TCA 72 bp ATTCTCAACCCACAGCATCTGAGTGAAGCTCTGCCCTaGAGCCCCAACATGGTCTGCTGCCCAGGAAACCCA +
Preference number: 6 (lower is better)
Translates to: ILNPQHLSEALP*SPNMVCCPGNP
Trigger: TGGGTTTCCTGGGCAGCAGACCATGTTGGGGCTTCAGGGCAGAGCTTCACTCAGATGCTGTGGGTTGAGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588340.1
CDS TCA 72 bp GTGCACCCATGTCATTCTCAACCCACAGCATCTGAGTaGAGCTCTGCCCTGAAGCCCCAACATGGTCTGCTG +
Preference number: 6 (lower is better)
Translates to: VHPCHSQPTASE*SSALKPQHGLL
Trigger: CAGCAGACCATGTTGGGGCTTCAGGGCAGAGCTTCACTCAGATGCTGTGGGTTGAGAATGACATGGGTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588340.1
CDS TCA 72 bp TGGCGTGCACCCATGTCATTCTCAACCCACAGCATCTaGGTGAAGCTCTGCCCTGAAGCCCCAACATGGTCT +
Preference number: 6 (lower is better)
Translates to: WRAPMSFSTHSI*VKLCPEAPTWS
Trigger: AGACCATGTTGGGGCTTCAGGGCAGAGCTTCACTCAGATGCTGTGGGTTGAGAATGACATGGGTGCACGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588340.1
CDS GCA 72 bp ATCTTGTTGATGCACACAGTGACTGCCAGCCTCTCCTaGACCGCATGCTTGATCAGCCGCTCTGTGTTCAGC +
Preference number: 6 (lower is better)
Translates to: ILLMHTVTASLS*TACLISRSVFS
Trigger: GCTGAACACAGAGCGGCTGATCAAGCATGCGGTGCAGGAGAGGCTGGCAGTCACTGTGTGCATCAACAAGAT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000587957.1
ENST00000591382.5
ENST00000592576.5
ENST00000593200.5
CDS GCA 72 bp TTGGGCTTGGCGCCCACCTTTGGAGAAGGGATATGCTaGACACACATGTCCACAAAGCCTGTGAACTCGCCA +
Preference number: 6 (lower is better)
Translates to: LGLAPTFGEGIC*THMSTKPVNSP
Trigger: TGGCGAGTTCACAGGCTTTGTGGACATGTGTGTGCAGCATATCCCTTCTCCAAAGGTGGGCGCCAAGCCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000585616.5
ENST00000585794.5
ENST00000586654.5
ENST00000590367.5
ENST00000591382.5
ENST00000592576.5
CDS GCA 72 bp GGCCCTCCCTGGTTCCCCACTGGAAACCTTGAACGATaGTGTCCTTCACTGAACCAAGAAGAGCCTTGTCCA +
Preference number: 6 (lower is better)
Translates to: GPPWFPTGNLER*CPSLNQEEPCP
Trigger: TGGACAAGGCTCTTCTTGGTTCAGTGAAGGACAGCATCGTTCAAGGTTTCCAGTGGGGAACCAGGGAGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000586276.5
ENST00000589769.1
ENST00000590124.5
ENST00000590367.5
ENST00000590977.5
ENST00000591382.5
ENST00000592576.5
CDS GCA 72 bp CCTGGCCAGGACGGTATAAACTGCAGAGACGCAATCTaGAGGGGCCTGGACCTCTACAAAGTAGTAAGGCTC +
Preference number: 6 (lower is better)
Translates to: PGQDGINCRDAI*RGLDLYKVVRL
Trigger: GAGCCTTACTACTTTGTAGAGGTCCAGGCCCCTGCAGATTGCGTCTCTGCAGTTTATACCGTCCTGGCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000586276.5
ENST00000590367.5
ENST00000591382.5
ENST00000592576.5
CDS GCA 72 bp CTTGGGATGGTCCTGTGTACCCCAAGCTGCTTCTCCTaGCGAATCCTAAAGATGGTGAGCCCATCCCACTCA +
Preference number: 6 (lower is better)
Translates to: LGMVLCTPSCFS*RILKMVSPSHS
Trigger: TGAGTGGGATGGGCTCACCATCTTTAGGATTCGGCAGGAGAAGCAGCTTGGGGTACACAGGACCATCCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586276.5
ENST00000590367.5
ENST00000590977.5
CDS GCA 72 bp TGTCTGATGTTACCTCACTGCCGCTTCCCGCTACAATaGAGGAGCTCAGAGGACTTCGGAGGGAACTTGGCA +
Preference number: 6 (lower is better)
Translates to: CLMLPHCRFPLQ*RSSEDFGGNLA
Trigger: TGCCAAGTTCCCTCCGAAGTCCTCTGAGCTCCTGCATTGTAGCGGGAAGCGGCAGTGAGGTAACATCAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592701.2
CDS CCA 72 bp TGGTGGACTTACATTCATCACAGAGGGGGCCCTCCCTaGTTCCCCACTGGAAACCTTGAACGATGCTGTCCT +
Preference number: 6 (lower is better)
Translates to: WWTYIHHRGGPP*FPTGNLERCCP
Trigger: AGGACAGCATCGTTCAAGGTTTCCAGTGGGGAACCAGGGAGGGCCCCCTCTGTGATGAATGTAAGTCCACCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000586276.5
ENST00000590367.5
ENST00000590977.5
CDS CCA 72 bp CTGTACATCTTAGTAGTGTGGCACATCAGGGGGCCCTaGAAGAGGGGACAGGGTGCAGCTTCAACCACATCT +
Preference number: 6 (lower is better)
Translates to: LYILVVWHIRGP*KRGQGAASTTS
Trigger: AGATGTGGTTGAAGCTGCACCCTGTCCCCTCTTCCAGGGCCCCCTGATGTGCCACACTACTAAGATGTACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586276.5
CDS CAA 72 bp TGGTCTCCACCTCAGGACCATACACCTCCTCGGCTGTaGGGTAGTACTTCTTGTCCTCATGCAGCACCACCT +
Preference number: 6 (lower is better)
Translates to: WSPPQDHTPPRL*GSTSCPHAAPP
Trigger: AGGTGGTGCTGCATGAGGACAAGAAGTACTACCCAACAGCCGAGGAGGTGTATGGTCCTGAGGTGGAGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000589825.5
ENST00000591382.5
ENST00000592408.5
ENST00000592576.5
ENST00000592701.2
ENST00000593072.5
CDS CAA 90 bp CTTGAACTATGGTCTCCACCTCAGGACCATACACCTCCTCGGCTGTaGGGTAGTACTTCTTGTCCTCATGCAGCACCACCTCCATCCCAG +
Preference number: 6 (lower is better)
Translates to: LELWSPPQDHTPPRL*GSTSCPHAAPPPSQ
Trigger: CTGGGATGGAGGTGGTGCTGCATGAGGACAAGAAGTACTACCCAACAGCCGAGGAGGTGTATGGTCCTGAGGTGGAGACCATAGTTCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000589825.5
ENST00000591382.5
ENST00000592408.5
ENST00000592576.5
ENST00000592701.2
ENST00000593072.5
CDS CAA 90 bp GCAGGAACTCGGTATCACAGCCACTCTCCAGCCCTCGGAAGGGACTaGTGCAAGACACTCAGTTTTGCCAACAGCCTGGTCCAAGAAAGT +
Preference number: 6 (lower is better)
Translates to: AGTRYHSHSPALGRD*CKTLSFANSLVQES
Trigger: ACTTTCTTGGACCAGGCTGTTGGCAAAACTGAGTGTCTTGCACAAGTCCCTTCCGAGGGCTGGAGAGTGGCTGTGATACCGAGTTCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590367.5
CDS TCA 72 bp TCCCCACTGGAAACCTTGAACGATGCTGTCCTTCACTaGACCAAGAAGAGCCTTGTCCACCTCAGAGGGCAG +
Preference number: 6 (lower is better)
Translates to: SPLETLNDAVLH*TKKSLVHLRGQ
Trigger: CTGCCCTCTGAGGTGGACAAGGCTCTTCTTGGTTCAGTGAAGGACAGCATCGTTCAAGGTTTCCAGTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000586276.5
ENST00000589769.1
ENST00000590124.5
ENST00000590367.5
ENST00000590977.5
ENST00000591382.5
ENST00000592576.5
CDS TCA 72 bp CTCTCAGCATCCATTCAGCCATCTACCACCATTCACTaGACAACCCCCATGGGTCTGACAGAGCTGGTGCTG +
Preference number: 6 (lower is better)
Translates to: LSASIQPSTTIH*TTPMGLTELVL
Trigger: CAGCACCAGCTCTGTCAGACCCATGGGGGTTGTTCAGTGAATGGTGGTAGATGGCTGAATGGATGCTGAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000588340.1
CDS GCA 72 bp TTGGGCTTGGCGCCCACCTTTGGAGAAGGGATATGCTaGACACACATGTCCACAAAGCCTGTGGATGGAGAA +
Preference number: 6 (lower is better)
Translates to: LGLAPTFGEGIC*THMSTKPVDGE
Trigger: TTCTCCATCCACAGGCTTTGTGGACATGTGTGTGCAGCATATCCCTTCTCCAAAGGTGGGCGCCAAGCCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587914.1
CDS GCA 72 bp ATCTTGGGCTTGGCGCCCACCTTTGGAGAAGGGATATaGTGCACACACATGTCCACAAAGCCTGTGGATGGA +
Preference number: 6 (lower is better)
Translates to: ILGLAPTFGEGI*CTHMSTKPVDG
Trigger: TCCATCCACAGGCTTTGTGGACATGTGTGTGCAGCATATCCCTTCTCCAAAGGTGGGCGCCAAGCCCAAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000587914.1
CDS GCA 72 bp TATCACAGCCACTCTCCAGCCCTCGGAAGGGACTTGTaGAAGACACTCAGTTTTGCCAACAGCCTGGTCCAA +
Preference number: 6 (lower is better)
Translates to: YHSHSPALGRDL*KTLSFANSLVQ
Trigger: TTGGACCAGGCTGTTGGCAAAACTGAGTGTCTTGCACAAGTCCCTTCCGAGGGCTGGAGAGTGGCTGTGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590367.5
CDS CCA 72 bp AGATGGAACGGGCAGCCAGCAGATCCCAATCGTACTTaGTCTGGAAGAACTCTCCCAGCTTCTTCCTGTTCC +
Preference number: 6 (lower is better)
Translates to: RWNGQPADPNRT*SGRTLPASSCS
Trigger: GGAACAGGAAGAAGCTGGGAGAGTTCTTCCAGACCAAGTACGATTGGGATCTGCTGGCTGCCCGTTCCATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000586276.5
ENST00000590124.5
ENST00000590367.5
ENST00000590977.5
ENST00000591382.5
ENST00000592576.5
CDS CCA 72 bp CATTCCGAATCAATTCATCACAGAGGGGGCCCTCCCTaGTTCCCCACTGGAAACCTTGAACGATGCTGTCCT +
Preference number: 6 (lower is better)
Translates to: HSESIHHRGGPP*FPTGNLERCCP
Trigger: AGGACAGCATCGTTCAAGGTTTCCAGTGGGGAACCAGGGAGGGCCCCCTCTGTGATGAATTGATTCGGAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000589769.1
ENST00000590124.5
ENST00000591382.5
ENST00000592576.5
CDS CCA 72 bp TACAATGCAGGAGCTCAGAGGACTTCGGAGGGAACTTaGCAAAGAACGGCTCTCGCCTGCTCAGCTAAGAGT +
Preference number: 6 (lower is better)
Translates to: YNAGAQRTSEGT*QRTALACSAKS
Trigger: ACTCTTAGCTGAGCAGGCGAGAGCCGTTCTTTGCCAAGTTCCCTCCGAAGTCCTCTGAGCTCCTGCATTGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000593072.5
CDS CAA 72 bp CGCAGGCCATCAAGCATCTTGGGCAGCTCTGAGGGGTaGACTGGCTCCACAGCAATCTTGATAACAGATGTG +
Preference number: 6 (lower is better)
Translates to: RRPSSILGSSEG*TGSTAILITDV
Trigger: CACATCTGTTATCAAGATTGCTGTGGAGCCAGTCAACCCCTCAGAGCTGCCCAAGATGCTTGATGGCCTGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000586276.5
ENST00000590367.5
ENST00000591382.5
ENST00000592576.5
CDS CAA 72 bp CAGATGGAACGGGCAGCCAGCAGATCCCAATCGTACTaGGTCTGGAAGAACTCTCCCAGCTTCTTCCTGTTC +
Preference number: 6 (lower is better)
Translates to: QMERAASRSQSY*VWKNSPSFFLF
Trigger: GAACAGGAAGAAGCTGGGAGAGTTCTTCCAGACCAAGTACGATTGGGATCTGCTGGCTGCCCGTTCCATCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000586276.5
ENST00000590124.5
ENST00000590367.5
ENST00000590977.5
ENST00000591382.5
ENST00000592576.5
CDS CAA 90 bp CCAAAAGCCCAGATGGAACGGGCAGCCAGCAGATCCCAATCGTACTaGGTCTGGAAGAACTCTCCCAGCTTCTTCCTGTTCCACGTAATC +
Preference number: 6 (lower is better)
Translates to: PKAQMERAASRSQSY*VWKNSPSFFLFHVI
Trigger: GATTACGTGGAACAGGAAGAAGCTGGGAGAGTTCTTCCAGACCAAGTACGATTGGGATCTGCTGGCTGCCCGTTCCATCTGGGCTTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000586276.5
ENST00000590124.5
ENST00000590367.5
ENST00000590977.5
ENST00000591382.5
ENST00000592576.5
CDS TCA 72 bp GAGCTCCCAGGAGTCCACGCACTCACATGGGGTAATTaGGCACAACATCCTGTTTGGCAAGTTCCAGCAACA +
Preference number: 6 (lower is better)
Translates to: ELPGVHALTWGN*AQHPVWQVPAT
Trigger: TGTTGCTGGAACTTGCCAAACAGGATGTTGTGCTCAATTACCCCATGTGAGTGCGTGGACTCCTGGGAGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000586276.5
ENST00000590124.5
ENST00000590367.5
ENST00000590977.5
ENST00000591382.5
ENST00000592576.5
CDS GCA 72 bp ATGGGGCCATGGCAGAGTAGCAGTCTCCTGCAACACTaGAGCTGTCTTGCAGTCATGAAAGACATGGTACAG +
Preference number: 6 (lower is better)
Translates to: MGPWQSSSLLQH*SCLAVMKDMVQ
Trigger: CTGTACCATGTCTTTCATGACTGCAAGACAGCTGCAGTGTTGCAGGAGACTGCTACTCTGCCATGGCCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000586276.5
ENST00000590367.5
ENST00000590977.5
CDS CCA 72 bp GTAGGTGTGCTCAATCTTGGGCTTGGCGCCCACCTTTaGAGAAGGGATATGCTGCACACACATGTCCACAAA +
Preference number: 6 (lower is better)
Translates to: VGVLNLGLGAHL*RRDMLHTHVHK
Trigger: TTTGTGGACATGTGTGTGCAGCATATCCCTTCTCCAAAGGTGGGCGCCAAGCCCAAGATTGAGCACACCTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000585616.5
ENST00000585794.5
ENST00000586654.5
ENST00000587914.1
ENST00000590367.5
ENST00000591382.5
ENST00000592576.5
CDS CCA 72 bp TGGACTCCATCATCTGTGCTGTACATCTTAGTAGTGTaGCACATCAGGGGGCCATCAGGGTCACAGTCACTC +
Preference number: 6 (lower is better)
Translates to: WTPSSVLYILVV*HIRGPSGSQSL
Trigger: GAGTGACTGTGACCCTGATGGCCCCCTGATGTGCCACACTACTAAGATGTACAGCACAGATGATGGAGTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000585616.5
ENST00000585794.5
ENST00000586654.5
ENST00000587914.1
ENST00000590367.5
ENST00000591382.5
ENST00000592576.5
CDS CCA 72 bp GTGTCCCTGGGACCATCTAGCTTAAGCCAACCCAGTTaGTCTCTTCAGAAACTCTACCTCCTCATTGCCTCG +
Preference number: 6 (lower is better)
Translates to: VSLGPSSLSQPS*SLQKLYLLIAS
Trigger: CGAGGCAATGAGGAGGTAGAGTTTCTGAAGAGACCAACTGGGTTGGCTTAAGCTAGATGGTCCCAGGGACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586276.5
CDS CCA 72 bp TACAATGCAGGAGCTCAGAGGACTTCGGAGGGAACTTaGCAAAGAACGGCTGAAAGCGGCACGGATAGAAGA +
Preference number: 6 (lower is better)
Translates to: YNAGAQRTSEGT*QRTAESGTDRR
Trigger: TCTTCTATCCGTGCCGCTTTCAGCCGTTCTTTGCCAAGTTCCCTCCGAAGTCCTCTGAGCTCCTGCATTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591382.5
CDS CAA 72 bp CATCCACAATGTGGCGCAGCTTGTAATAAGCATCAGTaGGAGGCAGCTTCAGCTCCAGGATCAGCCGGTCAA +
Preference number: 6 (lower is better)
Translates to: HPQCGAACNKHQ*EAASAPGSAGQ
Trigger: TTGACCGGCTGATCCTGGAGCTGAAGCTGCCTCCAACTGATGCTTATTACAAGCTGCGCCACATTGTGGATG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000587957.1
ENST00000591382.5
ENST00000592576.5
ENST00000593200.5
CDS CAA 72 bp ATGTCCACAAAGCCTGTGAACTCGCCAAAGAACTTTTaGCAGACCAGCCTGAGCAAGGGGCGGATGTTCAGC +
Preference number: 6 (lower is better)
Translates to: MSTKPVNSPKNF*QTSLSKGRMFS
Trigger: GCTGAACATCCGCCCCTTGCTCAGGCTGGTCTGCAAAAAGTTCTTTGGCGAGTTCACAGGCTTTGTGGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000585616.5
ENST00000585794.5
ENST00000586654.5
ENST00000590367.5
ENST00000591382.5
ENST00000592576.5
CDS CAA 72 bp GGCTCCTGGGCAACCACCGCATCCAGGATCTTAAACTaGACATTCCGAATCACTGTAAAGGAGGTGGAGGGA +
Preference number: 6 (lower is better)
Translates to: GSWATTASRILN*TFRITVKEVEG
Trigger: TCCCTCCACCTCCTTTACAGTGATTCGGAATGTCAAGTTTAAGATCCTGGATGCGGTGGTTGCCCAGGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586276.5
ENST00000590367.5
ENST00000590977.5
CDS CAA 90 bp ACCAGGCACAATCTGCCAGTGGTGGAAGACAGACAGAGAAAAGGCTaGTCCCTGGGTGTGAGTCCGGAGATCAGTCTCAAAGCCAAAAGA +
Preference number: 6 (lower is better)
Translates to: TRHNLPVVEDRQRKG*SLGVSPEISLKAKR
Trigger: TCTTTTGGCTTTGAGACTGATCTCCGGACTCACACCCAGGGACAAGCCTTTTCTCTGTCTGTCTTCCACCACTGGCAGATTGTGCCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000586276.5
ENST00000589769.1
ENST00000590367.5
ENST00000590977.5
ENST00000591382.5
ENST00000592576.5
CDS CAA 90 bp CACTGGCTTAATAATGGGTTCTGTGAGAGGCTGAGTGTCTTCCTCTaGAACTATGGTCTCCACCTCAGGACCATACACCTCCTCGGCTGT +
Preference number: 6 (lower is better)
Translates to: HWLNNGFCERLSVFL*NYGLHLRTIHLLGC
Trigger: ACAGCCGAGGAGGTGTATGGTCCTGAGGTGGAGACCATAGTTCAAGAGGAAGACACTCAGCCTCTCACAGAACCCATTATTAAGCCAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000589825.5
ENST00000591382.5
ENST00000592408.5
ENST00000592576.5
ENST00000592701.2
ENST00000593072.5
CDS TCA 72 bp CCTGGGAATGTGCTGCTAGAAGATTTGGAGTCACCCTaGTGCCAGAAAAGAGCAAGCAGCAGGTATCAGTGG +
Preference number: 6 (lower is better)
Translates to: PGNVLLEDLESP*CQKRASSRYQW
Trigger: CCACTGATACCTGCTGCTTGCTCTTTTCTGGCATCAGGGTGACTCCAAATCTTCTAGCAGCACATTCCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000587914.1
CDS CCA 72 bp ATCCACAATGTGGCGCAGCTTGTAATAAGCATCAGTTaGAGGCAGCTTCAGCTCCAGGATCAGCCGGTCAAT +
Preference number: 6 (lower is better)
Translates to: IHNVAQLVISIS*RQLQLQDQPVN
Trigger: ATTGACCGGCTGATCCTGGAGCTGAAGCTGCCTCCAACTGATGCTTATTACAAGCTGCGCCACATTGTGGAT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000587957.1
ENST00000591382.5
ENST00000592576.5
ENST00000593200.5
CDS CAA 72 bp GGCAGCTCTGAGGGGTTGACTGGCTCCACAGCAATCTaGATAACAGATGTGGTATTGAACTTCAAGGGTCGG +
Preference number: 6 (lower is better)
Translates to: GSSEGLTGSTAI*ITDVVLNFKGR
Trigger: CCGACCCTTGAAGTTCAATACCACATCTGTTATCAAGATTGCTGTGGAGCCAGTCAACCCCTCAGAGCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000586276.5
ENST00000590367.5
ENST00000591382.5
ENST00000592576.5
CDS CAA 90 bp CTCATTGCCTCGGGGTTCGGTTATGGTTGCTGTCTTCACAATTGGTaGATCAACACCTTCAATCAGAACCCAGTTGCCAGCAGGAACACG +
Preference number: 6 (lower is better)
Translates to: LIASGFGYGCCLHNW*INTFNQNPVASRNT
Trigger: CGTGTTCCTGCTGGCAACTGGGTTCTGATTGAAGGTGTTGATCAACCAATTGTGAAGACAGCAACCATAACCGAACCCCGAGGCAATGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000586276.5
ENST00000590367.5
ENST00000591382.5
ENST00000592576.5
CDS CAA 90 bp CCTCCTCATTGCCTCGGGGTTCGGTTATGGTTGCTGTCTTCACAATaGGTTGATCAACACCTTCAATCAGAACCCAGTTGCCAGCAGGAA +
Preference number: 6 (lower is better)
Translates to: PPHCLGVRLWLLSSQ*VDQHLQSEPSCQQE
Trigger: TTCCTGCTGGCAACTGGGTTCTGATTGAAGGTGTTGATCAACCAATTGTGAAGACAGCAACCATAACCGAACCCCGAGGCAATGAGGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000586276.5
ENST00000590367.5
ENST00000591382.5
ENST00000592576.5
CDS TCA 72 bp ATACATGCCTTCCCAGGGAGCACGAGCAGGAGTTACTaGGCCATTCACAATGGTCAAAAAGCTCAAAGTGCG +
Preference number: 6 (lower is better)
Translates to: IHAFPGSTSRSY*AIHNGQKAQSA
Trigger: CGCACTTTGAGCTTTTTGACCATTGTGAATGGCTCAGTAACTCCTGCTCGTGCTCCCTGGGAAGGCATGTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000587914.1
CDS TCA 72 bp GGGAAAGGATCAGGTTCTCATCAGTGGAATACATGCTaGAACAGAGACAGTGGTGAACACAGTGCCAGGCTG +
Preference number: 6 (lower is better)
Translates to: GKGSGSHQWNTC*NRDSGEHSARL
Trigger: CAGCCTGGCACTGTGTTCACCACTGTCTCTGTTTCAGCATGTATTCCACTGATGAGAACCTGATCCTTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590367.5
CDS TCA 72 bp CTTAGCATCTGTTCCAGCCTCTTCAAGAAGGTTCAGTaGGGAGCATCTGCCTATGAGTGGGTCCTCAAGACA +
Preference number: 6 (lower is better)
Translates to: LSICSSLFKKVQ*GASAYEWVLKT
Trigger: TGTCTTGAGGACCCACTCATAGGCAGATGCTCCTCACTGAACCTTCTTGAAGAGGCTGGAACAGATGCTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590977.5
CDS GCA 72 bp ACCCAGTTGGTCTCTTCAGAAACTCTACCTCCTCATTaGCTCGGGGTTCGGTTATGGTTGCTGTCTTCACAA +
Preference number: 6 (lower is better)
Translates to: TQLVSSETLPPH*LGVRLWLLSSQ
Trigger: TTGTGAAGACAGCAACCATAACCGAACCCCGAGGCAATGAGGAGGTAGAGTTTCTGAAGAGACCAACTGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586276.5
CDS CCA 72 bp GCCTCGGGGTTCGGTTATGGTTGCTGTCTTCACAATTaGTTGATCAACACCTTCAATCAGAACCCAGTTGCC +
Preference number: 6 (lower is better)
Translates to: ASGFGYGCCLHN*LINTFNQNPVA
Trigger: GGCAACTGGGTTCTGATTGAAGGTGTTGATCAACCAATTGTGAAGACAGCAACCATAACCGAACCCCGAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000586276.5
ENST00000590367.5
ENST00000591382.5
ENST00000592576.5
CDS CCA 72 bp ACTCCTCCACCTGAAACACAACAGGCAGTCACAGCCTaGATTCTCTTATGCCAGCAAAGGCACACACAAACA +
Preference number: 6 (lower is better)
Translates to: TPPPETQQAVTA*ILLCQQRHTQT
Trigger: TGTTTGTGTGTGCCTTTGCTGGCATAAGAGAATCCAGGCTGTGACTGCCTGTTGTGTTTCAGGTGGAGGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000590977.5
CDS CAA 72 bp AACCCAGTTGGTCTCTTCAGAAACTCTACCTCCTCATaGCCTCGGGGTTCGGTTATGGTTGCTGTCTTCACA +
Preference number: 6 (lower is better)
Translates to: NPVGLFRNSTSS*PRGSVMVAVFT
Trigger: TGTGAAGACAGCAACCATAACCGAACCCCGAGGCAATGAGGAGGTAGAGTTTCTGAAGAGACCAACTGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586276.5
CDS CAA 90 bp GTCGGAAAATCTGAGCCTCCTCATTGCCTCGGGGTTCGGTTATGGTaGCTGTCTTCACAATTGGTTGATCAACACCTTCAATCAGAACCC +
Preference number: 6 (lower is better)
Translates to: VGKSEPPHCLGVRLW*LSSQLVDQHLQSEP
Trigger: GGGTTCTGATTGAAGGTGTTGATCAACCAATTGTGAAGACAGCAACCATAACCGAACCCCGAGGCAATGAGGAGGCTCAGATTTTCCGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590367.5
ENST00000591382.5
ENST00000592576.5
CDS CAA 90 bp CCAAGGACTGTCATGAAATCCTTAAGGATGTCCCTTGATTTGAGGTaGTCTGATGTTACCTCACTGCCGCTTCCCGCTACAATGCAGGAG +
Preference number: 6 (lower is better)
Translates to: PRTVMKSLRMSLDLR*SDVTSLPLPATMQE
Trigger: CTCCTGCATTGTAGCGGGAAGCGGCAGTGAGGTAACATCAGACAACCTCAAATCAAGGGACATCCTTAAGGATTTCATGACAGTCCTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592701.2
CDS TCA 72 bp CGTGACAACTGGGTCAGCCACCTTGATGTCTATCTCTaGGTACATCTTCCGCAAATCATGCATCACACAGTC +
Preference number: 6 (lower is better)
Translates to: RDNWVSHLDVYL*VHLPQIMHHTV
Trigger: GACTGTGTGATGCATGATTTGCGGAAGATGTACTCAGAGATAGACATCAAGGTGGCTGACCCAGTTGTCACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000586276.5
ENST00000590367.5
ENST00000590977.5
ENST00000591382.5
ENST00000592576.5
CDS TCA 72 bp TGTCAGTATAGCACAGATCTTGGTCATAGCGCTTTCTaGTTTCCGGGTGAGTCTTGCCATGGTGGAGATGTC +
Preference number: 6 (lower is better)
Translates to: CQYSTDLGHSAF*FPGESCHGGDV
Trigger: GACATCTCCACCATGGCAAGACTCACCCGGAAATCAGAAAGCGCTATGACCAAGATCTGTGCTATACTGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592576.5
CDS GCA 72 bp CTGAGCCTCCTCATTGCCTCGGGGTTCGGTTATGGTTaGTGTCTTCACAATTGGTTGATCAACACCTTCAAT +
Preference number: 6 (lower is better)
Translates to: LSLLIASGFGYG*CLHNWLINTFN
Trigger: ATTGAAGGTGTTGATCAACCAATTGTGAAGACAGCAACCATAACCGAACCCCGAGGCAATGAGGAGGCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590367.5
ENST00000591382.5
ENST00000592576.5
CDS CAA 72 bp AATAATGGGTTCTGTGAGAGGCTGAGTGTCTTCCTCTaGAACTATGGTCTCCACCTCAGGACCATACACCTC +
Preference number: 6 (lower is better)
Translates to: NNGFCERLSVFL*NYGLHLRTIHL
Trigger: GAGGTGTATGGTCCTGAGGTGGAGACCATAGTTCAAGAGGAAGACACTCAGCCTCTCACAGAACCCATTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000589825.5
ENST00000591382.5
ENST00000592408.5
ENST00000592576.5
ENST00000592701.2
ENST00000593072.5
CDS CAA 72 bp TCGGGGTTCGGTTATGGTTGCTGTCTTCACAATTGGTaGATCAACACCTTCAATCAGAACCCAGTTGCCAGC +
Preference number: 6 (lower is better)
Translates to: SGFGYGCCLHNW*INTFNQNPVAS
Trigger: GCTGGCAACTGGGTTCTGATTGAAGGTGTTGATCAACCAATTGTGAAGACAGCAACCATAACCGAACCCCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000586276.5
ENST00000590367.5
ENST00000591382.5
ENST00000592576.5
CDS CAA 72 bp TCTGAGCCTCCTCATTGCCTCGGGGTTCGGTTATGGTaGCTGTCTTCACAATTGGTTGATCAACACCTTCAA +
Preference number: 6 (lower is better)
Translates to: SEPPHCLGVRLW*LSSQLVDQHLQ
Trigger: TTGAAGGTGTTGATCAACCAATTGTGAAGACAGCAACCATAACCGAACCCCGAGGCAATGAGGAGGCTCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590367.5
ENST00000591382.5
ENST00000592576.5
CDS CAA 90 bp TTCCTTCCAAGGACTGTCATGAAATCCTTAAGGATGTCCCTTGATTaGAGGTTGTCTGATGTTACCTCACTGCCGCTTCCCGCTACAATG +
Preference number: 6 (lower is better)
Translates to: FLPRTVMKSLRMSLD*RLSDVTSLPLPATM
Trigger: CATTGTAGCGGGAAGCGGCAGTGAGGTAACATCAGACAACCTCAAATCAAGGGACATCCTTAAGGATTTCATGACAGTCCTTGGAAGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592701.2
CDS CAA 90 bp TCTTCAGAAACTCTACCTCCTCATTGCCTCGGGGTTCGGTTATGGTaGCTGTCTTCACAATTGGTTGATCAACACCTTCAATCAGAACCC +
Preference number: 6 (lower is better)
Translates to: SSETLPPHCLGVRLW*LSSQLVDQHLQSEP
Trigger: GGGTTCTGATTGAAGGTGTTGATCAACCAATTGTGAAGACAGCAACCATAACCGAACCCCGAGGCAATGAGGAGGTAGAGTTTCTGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586276.5
CDS TCA 72 bp GACACTCAGTTTTGCCAACAGCCTGGTCCAAGAAAGTaGCATGATGGAGCTGTTCCCCTAATTCCCAATAAC +
Preference number: 6 (lower is better)
Translates to: DTQFCQQPGPRK*HDGAVPLIPNN
Trigger: GTTATTGGGAATTAGGGGAACAGCTCCATCATGTCACTTTCTTGGACCAGGCTGTTGGCAAAACTGAGTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590367.5
CDS TCA 72 bp ATAAAAGGCACCCGTCCTAATTCCTCGCATCTGAACTaGGTACAGGGAGAATCCAGCAGGGTCATATCTAGA +
Preference number: 6 (lower is better)
Translates to: IKGTRPNSSHLN*VQGESSRVISR
Trigger: TCTAGATATGACCCTGCTGGATTCTCCCTGTACTCAGTTCAGATGCGAGGAATTAGGACGGGTGCCTTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586276.5
CDS GCA 72 bp GCTGGGAACATTCTGCACAATCTTGGAAAAGTTAACTaGACCAGACAGACAAGGGGAAACCTACAGGACAGA +
Preference number: 6 (lower is better)
Translates to: AGNILHNLGKVN*TRQTRGNLQDR
Trigger: TCTGTCCTGTAGGTTTCCCCTTGTCTGTCTGGTGCAGTTAACTTTTCCAAGATTGTGCAGAATGTTCCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590367.5
CDS GCA 72 bp CTCTACCTCCTCATTGCCTCGGGGTTCGGTTATGGTTaGTGTCTTCACAATTGGTTGATCAACACCTTCAAT +
Preference number: 6 (lower is better)
Translates to: LYLLIASGFGYG*CLHNWLINTFN
Trigger: ATTGAAGGTGTTGATCAACCAATTGTGAAGACAGCAACCATAACCGAACCCCGAGGCAATGAGGAGGTAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586276.5
CDS GCA 72 bp ATCCTGTTCCAAGTAGCTGAAAGTTCCGTCTTACCTTaGCATGGTGGAGATGTCCACAAAGGGTCACATTTC +
Preference number: 6 (lower is better)
Translates to: ILFQVAESSVLP*HGGDVHKGSHF
Trigger: GAAATGTGACCCTTTGTGGACATCTCCACCATGGCAAGGTAAGACGGAACTTTCAGCTACTTGGAACAGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000589825.5
CDS CCA 72 bp AAATCTGAGCCTCCTCATTGCCTCGGGGTTCGGTTATaGTTGCTGTCTTCACAATTGGTTGATCAACACCTT +
Preference number: 6 (lower is better)
Translates to: KSEPPHCLGVRL*LLSSQLVDQHL
Trigger: AAGGTGTTGATCAACCAATTGTGAAGACAGCAACCATAACCGAACCCCGAGGCAATGAGGAGGCTCAGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590367.5
ENST00000591382.5
ENST00000592576.5
CDS CCA 72 bp CCTTCACAAGGCTCTCTTCTATGGAGACAAAGCTCTTaGCAAGGACAAAAGTTTGGTTTCAGCGGCATCTCT +
Preference number: 6 (lower is better)
Translates to: PSQGSLLWRQSS*QGQKFGFSGIS
Trigger: AGAGATGCCGCTGAAACCAAACTTTTGTCCTTGCCAAGAGCTTTGTCTCCATAGAAGAGAGCCTTGTGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585794.5
CDS CCA 72 bp GAAACTCTACCTCCTCATTGCCTCGGGGTTCGGTTATaGTTGCTGTCTTCACAATTGGTTGATCAACACCTT +
Preference number: 6 (lower is better)
Translates to: ETLPPHCLGVRL*LLSSQLVDQHL
Trigger: AAGGTGTTGATCAACCAATTGTGAAGACAGCAACCATAACCGAACCCCGAGGCAATGAGGAGGTAGAGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586276.5
CDS CAA 72 bp GTCATGAAATCCTTAAGGATGTCCCTTGATTTGAGGTaGTCTGATGTTACCTCACTGCCGCTTCCCGCTACA +
Preference number: 6 (lower is better)
Translates to: VMKSLRMSLDLR*SDVTSLPLPAT
Trigger: TGTAGCGGGAAGCGGCAGTGAGGTAACATCAGACAACCTCAAATCAAGGGACATCCTTAAGGATTTCATGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592701.2
CDS CAA 72 bp ACTCTACCTCCTCATTGCCTCGGGGTTCGGTTATGGTaGCTGTCTTCACAATTGGTTGATCAACACCTTCAA +
Preference number: 6 (lower is better)
Translates to: TLPPHCLGVRLW*LSSQLVDQHLQ
Trigger: TTGAAGGTGTTGATCAACCAATTGTGAAGACAGCAACCATAACCGAACCCCGAGGCAATGAGGAGGTAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586276.5
CDS CAA 90 bp GCAAAGGCACACACAAACAAAATCAAGGCCAGAGCAGACAAGAAGTaGCCTATCAGAAACAGCTACTACTTAGCATCTGTTCCAGCCTCT +
Preference number: 6 (lower is better)
Translates to: AKAHTNKIKARADKK*PIRNSYYLASVPAS
Trigger: AGAGGCTGGAACAGATGCTAAGTAGTAGCTGTTTCTGATAGGCAACTTCTTGTCTGCTCTGGCCTTGATTTTGTTTGTGTGTGCCTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590977.5
CDS CAA 72 bp GTTGATTTCCCAGAGCTGGGAACATTCTGCACAATCTaGGAAAAGTTAACTGCACCAGACAGACAAGGGGAA +
Preference number: 6 (lower is better)
Translates to: VDFPELGTFCTI*EKLTAPDRQGE
Trigger: TTCCCCTTGTCTGTCTGGTGCAGTTAACTTTTCCAAGATTGTGCAGAATGTTCCCAGCTCTGGGAAATCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000590367.5
CDS TCA 72 bp ATCCACTCCCAGGGGTTTTCTACCTTATTAATCCATTaGCCTCATCCACAATGTGGCGCAGCTTGTAATAAG +
Preference number: 6 (lower is better)
Translates to: IHSQGFSTLLIH*PHPQCGAACNK
Trigger: CTTATTACAAGCTGCGCCACATTGTGGATGAGGTCAATGGATTAATAAGGTAGAAAACCCCTGGGAGTGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000587957.1
CDS CCA 72 bp TGTCTGCTCCATCAGAGTGAATTTCTTGGTTTTCACTaGCTTAATAATGGGTTCTGTGAGAGGCTGAGTGTC +
Preference number: 6 (lower is better)
Translates to: CLLHQSEFLGFH*LNNGFCERLSV
Trigger: GACACTCAGCCTCTCACAGAACCCATTATTAAGCCAGTGAAAACCAAGAAATTCACTCTGATGGAGCAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000589825.5
ENST00000591382.5
ENST00000592408.5
ENST00000592576.5
ENST00000593072.5
CDS CAA 72 bp CACACAAACAAAATCAAGGCCAGAGCAGACAAGAAGTaGCCTATCAGAAACAGCTACTACTTAGCATCTGTT +
Preference number: 6 (lower is better)
Translates to: HTNKIKARADKK*PIRNSYYLASV
Trigger: AACAGATGCTAAGTAGTAGCTGTTTCTGATAGGCAACTTCTTGTCTGCTCTGGCCTTGATTTTGTTTGTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000590977.5
CDS CAA 90 bp TCATACACCGTAACAGGTAATGTCTGCTCCATCAGAGTGAATTTCTaGGTTTTCACTGGCTTAATAATGGGTTCTCATCAAGATCTTTGG +
Preference number: 6 (lower is better)
Translates to: SYTVTGNVCSIRVNF*VFTGLIMGSHQDLW
Trigger: CCAAAGATCTTGATGAGAACCCATTATTAAGCCAGTGAAAACCAAGAAATTCACTCTGATGGAGCAGACATTACCTGTTACGGTGTATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588374.1
CDS CCA 72 bp TGTCTGCTCCATCAGAGTGAATTTCTTGGTTTTCACTaGCTTAATAATGGGTTCTCATCAAGATCTTTGGTC +
Preference number: 6 (lower is better)
Translates to: CLLHQSEFLGFH*LNNGFSSRSLV
Trigger: GACCAAAGATCTTGATGAGAACCCATTATTAAGCCAGTGAAAACCAAGAAATTCACTCTGATGGAGCAGACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588374.1
CDS CAA 72 bp GAAGTAGATGTCACCCCAGAGTCTTTTAGCAAATTCTaGGTAATTAATGTCACCAAAGGTGTCGGCATAGAT +
Preference number: 6 (lower is better)
Translates to: EVDVTPESFSKF*VINVTKGVGID
Trigger: ATCTATGCCGACACCTTTGGTGACATTAATTACCAAGAATTTGCTAAAAGACTCTGGGGTGACATCTACTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000402521.7
ENST00000426333.7
ENST00000590367.5
ENST00000591382.5
ENST00000592576.5
CDS CAA 72 bp GTAACAGGTAATGTCTGCTCCATCAGAGTGAATTTCTaGGTTTTCACTGGCTTAATAATGGGTTCTCATCAA +
Preference number: 6 (lower is better)
Translates to: VTGNVCSIRVNF*VFTGLIMGSHQ
Trigger: TTGATGAGAACCCATTATTAAGCCAGTGAAAACCAAGAAATTCACTCTGATGGAGCAGACATTACCTGTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588374.1
CDS CAA 90 bp AATCCAGGATCATGTTTGCATTTGGTTGTCATGTCTCTAGTCTCTTaGGATCTACAATCTTCAGTCTTTGGATCTACAATCTTCAGTCTT +
Preference number: 6 (lower is better)
Translates to: NPGSCLHLVVMSLVS*DLQSSVFGSTIFSL
Trigger: AAGACTGAAGATTGTAGATCCAAAGACTGAAGATTGTAGATCCAAAGAGACTAGAGACATGACAACCAAATGCAAACATGATCCTGGATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000592701.2
CDS CCA 72 bp CCAAATTTCCTCTTAAGATGTAACTCAATTCTCAACTaGCTGTGTATTTATGATAAGAAACTAGACAGCCTA +
Preference number: 6 (lower is better)
Translates to: PNFLLRCNSILN*LCIYDKKLDSL
Trigger: TAGGCTGTCTAGTTTCTTATCATAAATACACAGCCAGTTGAGAATTGAGTTACATCTTAAGAGGAAATTTGG
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586276.5