RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EFR3B (Homo sapiens)

Ensembl gene IDs: ENSG00000084710

Ensembl transcript IDs: ENST00000264719.5, ENST00000401432.7, ENST00000402191.5, ENST00000403714.8, ENST00000405108.5

Found 953 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGGAGGAGGGGCCGGGAAGGGGAATTGGCAAAGAAGGCAACAAACTaGCTCCTGGGTGGCTCTGCCCGGCTCCGCGTTAGCTCCTCTCTG +
Preference number: 1 (lower is better)
Translates to: WRRGREGELAKKATN*LLGGSARLRVSSSL
Trigger: CAGAGAGGAGCTAACGCGGAGCCGGGCAGAGCCACCCAGGAGGCAGTTTGTTGCCTTCTTTGCCAATTCCCCTTCCCGGCCCCTCCTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR CCA 90 bp GGGGCCGGGAAGGGGAATTGGCAAAGAAGGCAACAAACTGCCTCCTaGGTGGCTCTGCCCGGCTCCGCGTTAGCTCCTCTCTGCACATCC +
Preference number: 1 (lower is better)
Translates to: GAGKGNWQRRQQTAS*VALPGSALAPLCTS
Trigger: GGATGTGCAGAGAGGAGCTAACGCGGAGCCGGGCAGAGCCACCCAGGAGGCAGTTTGTTGCCTTCTTTGCCAATTCCCCTTCCCGGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR CCA 90 bp TGTGAGGGAGATGCCTGGTTTCAGCACGACCCGCCTGCCAAGGTCTaGGGTCACAGGAAGTGGGCCTGGCCTGCCCTGATGATGCCATCT +
Preference number: 1 (lower is better)
Translates to: CEGDAWFQHDPPAKV*GHRKWAWPALMMPS
Trigger: AGATGGCATCATCAGGGCAGGCCAGGCCCACTTCCTGTGACCCCAGACCTTGGCAGGCGGGTCGTGCTGAAACCAGGCATCTCCCTCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR CCA 90 bp CAGGCGCTCAGCTGCACCAGTGTGGAGGGAAGGGTGGTTCAGATGTaGCATTCTGCACTAGCAAAGGCCTGGAGATGGCGGAGCGCAGCG +
Preference number: 1 (lower is better)
Translates to: QALSCTSVEGRVVQM*HSALAKAWRWRSAA
Trigger: CGCTGCGCTCCGCCATCTCCAGGCCTTTGCTAGTGCAGAATGCCACATCTGAACCACCCTTCCCTCCACACTGGTGCAGCTGAGCGCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR TCA 90 bp CACATCCGTGCACACCACACGTGGGGCTATGAGCTGAGGCCGTCCTaGGAAGCCTGCCCTCCCCTGAGGAGAAACAGCCTGCTTCTGACT +
Preference number: 1 (lower is better)
Translates to: HIRAHHTWGYELRPS*EACPPLRRNSLLLT
Trigger: AGTCAGAAGCAGGCTGTTTCTCCTCAGGGGAGGGCAGGCTTCTCAGGACGGCCTCAGCTCATAGCCCCACGTGTGGTGTGCACGGATGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR TCA 90 bp AATCAGGCTCTCCCTGCACATCCGTGCACACCACACGTGGGGCTATaGGCTGAGGCCGTCCTGAGAAGCCTGCCCTCCCCTGAGGAGAAA +
Preference number: 1 (lower is better)
Translates to: NQALPAHPCTPHVGL*AEAVLRSLPSPEEK
Trigger: TTTCTCCTCAGGGGAGGGCAGGCTTCTCAGGACGGCCTCAGCTCATAGCCCCACGTGTGGTGTGCACGGATGTGCAGGGAGAGCCTGATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR TCA 90 bp TGGCTGAGAGTGGAGAGAGTTGTGGCATGGCAGAAGGGCACAGGATaGAGGCCCCTGCACCCCTGCTTTGCCACCAAGCTACCTCTGGGC +
Preference number: 1 (lower is better)
Translates to: WLRVERVVAWQKGTG*RPLHPCFATKLPLG
Trigger: GCCCAGAGGTAGCTTGGTGGCAAAGCAGGGGTGCAGGGGCCTTCATCCTGTGCCCTTCTGCCATGCCACAACTCTCTCCACTCTCAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR TCA 90 bp GGGCAGTACGGCCCTAGGAACCACCGTGGGACTCTGGACTGGCACTaGTGGCTGAGAGTGGAGAGAGTTGTGGCATGGCAGAAGGGCACA +
Preference number: 1 (lower is better)
Translates to: GQYGPRNHRGTLDWH*WLRVERVVAWQKGT
Trigger: TGTGCCCTTCTGCCATGCCACAACTCTCTCCACTCTCAGCCATCAGTGCCAGTCCAGAGTCCCACGGTGGTTCCTAGGGCCGTACTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR GCA 90 bp CAGCTGCACCAGTGTGGAGGGAAGGGTGGTTCAGATGTGGCATTCTaGACTAGCAAAGGCCTGGAGATGGCGGAGCGCAGCGTGGGAGAG +
Preference number: 1 (lower is better)
Translates to: QLHQCGGKGGSDVAF*TSKGLEMAERSVGE
Trigger: CTCTCCCACGCTGCGCTCCGCCATCTCCAGGCCTTTGCTAGTGCAGAATGCCACATCTGAACCACCCTTCCCTCCACACTGGTGCAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR GCA 90 bp ACAGGGGCCGGGCGCTGGAGAACAGACAGTTCACAGGCGCTCAGCTaGACCAGTGTGGAGGGAAGGGTGGTTCAGATGTGGCATTCTGCA +
Preference number: 1 (lower is better)
Translates to: TGAGRWRTDSSQALS*TSVEGRVVQMWHSA
Trigger: TGCAGAATGCCACATCTGAACCACCCTTCCCTCCACACTGGTGCAGCTGAGCGCCTGTGAACTGTCTGTTCTCCAGCGCCCGGCCCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR CCA 90 bp TGGCATTCTGCACTAGCAAAGGCCTGGAGATGGCGGAGCGCAGCGTaGGAGAGATCGAGAGCAGCCCCACCAGAGTGGGACAGTGGATAC +
Preference number: 1 (lower is better)
Translates to: WHSALAKAWRWRSAA*ERSRAAPPEWDSGY
Trigger: GTATCCACTGTCCCACTCTGGTGGGGCTGCTCTCGATCTCTCCCACGCTGCGCTCCGCCATCTCCAGGCCTTTGCTAGTGCAGAATGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR CCA 90 bp GAGGGAAGGGTGGTTCAGATGTGGCATTCTGCACTAGCAAAGGCCTaGAGATGGCGGAGCGCAGCGTGGGAGAGATCGAGAGCAGCCCCA +
Preference number: 1 (lower is better)
Translates to: EGRVVQMWHSALAKA*RWRSAAWERSRAAP
Trigger: TGGGGCTGCTCTCGATCTCTCCCACGCTGCGCTCCGCCATCTCCAGGCCTTTGCTAGTGCAGAATGCCACATCTGAACCACCCTTCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR GCA 90 bp AGGGAGAATCGCCACTATGGGGAGAGAGCAGCCAACTCACCCCGATaGCTAACGCATTGGAGGTTCCCAGTCCTTGGAGCTGGAAGGGCC +
Preference number: 1 (lower is better)
Translates to: RENRHYGERAANSPR*LTHWRFPVLGAGRA
Trigger: GGCCCTTCCAGCTCCAAGGACTGGGAACCTCCAATGCGTTAGGCATCGGGGTGAGTTGGCTGCTCTCTCCCCATAGTGGCGATTCTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR CCA 90 bp TGTGGATTCACAACTCTGCCTCCACGCGCCAGAAATCAACAGTCATaGGGGGAGAGCTTGGAAGGGGAAGGTGACTGGCTTGGGCGGCCC +
Preference number: 1 (lower is better)
Translates to: CGFTTLPPRARNQQS*GESLEGEGDWLGRP
Trigger: GGGCCGCCCAAGCCAGTCACCTTCCCCTTCCAAGCTCTCCCCCCATGACTGTTGATTTCTGGCGCGTGGAGGCAGAGTTGTGAATCCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR CCA 90 bp CACTATGGGGAGAGAGCAGCCAACTCACCCCGATGCCTAACGCATTaGAGGTTCCCAGTCCTTGGAGCTGGAAGGGCCATGGAGGATGCC +
Preference number: 1 (lower is better)
Translates to: HYGERAANSPRCLTH*RFPVLGAGRAMEDA
Trigger: GGCATCCTCCATGGCCCTTCCAGCTCCAAGGACTGGGAACCTCCAATGCGTTAGGCATCGGGGTGAGTTGGCTGCTCTCTCCCCATAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR TCA 90 bp AACGTCCAGCAGACAGGACTGTGGGAGGCCAACACAAGCTCCTTATaGACAAAGGAGGTGGGAAGCTGCTGCAGGGACCACACTCGCCCG +
Preference number: 1 (lower is better)
Translates to: NVQQTGLWEANTSSL*TKEVGSCCRDHTRP
Trigger: CGGGCGAGTGTGGTCCCTGCAGCAGCTTCCCACCTCCTTTGTTCATAAGGAGCTTGTGTTGGCCTCCCACAGTCCTGTCTGCTGGACGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
3UTR TCA 90 bp GCCCTAATGGGCAGAGAGGCTGGGGAATGCCAGCCTGTCCATGCCTaGGGACCATGTAAGTCTTTCTGTCCCGGTCCCACCCAGATGTGT +
Preference number: 1 (lower is better)
Translates to: ALMGREAGECQPVHA*GPCKSFCPGPTQMC
Trigger: ACACATCTGGGTGGGACCGGGACAGAAAGACTTACATGGTCCTCAGGCATGGACAGGCTGGCATTCCCCAGCCTCTCTGCCCATTAGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR TCA 90 bp ACGGCCCTAGGAACCACCGTGGGACTCTGGACTGGCACTGATGGCTaGGAGTGGAGAGAGTTGTGGCATGGCAGAAGGGCACAGGATGAA +
Preference number: 1 (lower is better)
Translates to: TALGTTVGLWTGTDG*EWRELWHGRRAQDE
Trigger: TTCATCCTGTGCCCTTCTGCCATGCCACAACTCTCTCCACTCTCAGCCATCAGTGCCAGTCCAGAGTCCCACGGTGGTTCCTAGGGCCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR GCA 90 bp TGGAGAGAGTTGTGGCATGGCAGAAGGGCACAGGATGAAGGCCCCTaGACCCCTGCTTTGCCACCAAGCTACCTCTGGGCTAAGCTGACT +
Preference number: 1 (lower is better)
Translates to: WRELWHGRRAQDEGP*TPALPPSYLWAKLT
Trigger: AGTCAGCTTAGCCCAGAGGTAGCTTGGTGGCAAAGCAGGGGTGCAGGGGCCTTCATCCTGTGCCCTTCTGCCATGCCACAACTCTCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR CCA 90 bp GCAACATGTTGCCCTAAACCTTTCCCCAGGTGTGAGGGAGATGCCTaGTTTCAGCACGACCCGCCTGCCAAGGTCTGGGGTCACAGGAAG +
Preference number: 1 (lower is better)
Translates to: ATCCPKPFPRCEGDA*FQHDPPAKVWGHRK
Trigger: CTTCCTGTGACCCCAGACCTTGGCAGGCGGGTCGTGCTGAAACCAGGCATCTCCCTCACACCTGGGGAAAGGTTTAGGGCAACATGTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR CCA 90 bp GAGCAGCCCCACCAGAGTGGGACAGTGGATACGGGCCAGAGCAGGTaGGGAAAAATGAAATGGCAGAGCCCAGACTATGCATGGCTGGGA +
Preference number: 1 (lower is better)
Translates to: EQPHQSGTVDTGQSR*GKMKWQSPDYAWLG
Trigger: TCCCAGCCATGCATAGTCTGGGCTCTGCCATTTCATTTTTCCCCACCTGCTCTGGCCCGTATCCACTGTCCCACTCTGGTGGGGCTGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR CCA 90 bp AGACTCACTTCTGCAGGGCACTCTCTGTCACCAGGTCAGGAGGCCTaGGGACAATGGAATGGAAACTGCAAGGCATCATGTCCCAGGGCC +
Preference number: 1 (lower is better)
Translates to: RLTSAGHSLSPGQEA*GQWNGNCKASCPRA
Trigger: GGCCCTGGGACATGATGCCTTGCAGTTTCCATTCCATTGTCCCCAGGCCTCCTGACCTGGTGACAGAGAGTGCCCTGCAGAAGTGAGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR CCA 90 bp CCTGTCCCTGCCATACCGCGTCTTCCAGCTAGCCAGGCTCTAGGATaGGCCCATCATGACTATCCTGCAGTCTTCAGACCTAGGCCAGAT +
Preference number: 1 (lower is better)
Translates to: PVPAIPRLPASQALG*AHHDYPAVFRPRPD
Trigger: ATCTGGCCTAGGTCTGAAGACTGCAGGATAGTCATGATGGGCCCATCCTAGAGCCTGGCTAGCTGGAAGACGCGGTATGGCAGGGACAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR CCA 90 bp AGTGGGACAGTGGATACGGGCCAGAGCAGGTGGGGAAAAATGAAATaGCAGAGCCCAGACTATGCATGGCTGGGAATGCCAGGCACCAGG +
Preference number: 1 (lower is better)
Translates to: SGTVDTGQSRWGKMK*QSPDYAWLGMPGTR
Trigger: CCTGGTGCCTGGCATTCCCAGCCATGCATAGTCTGGGCTCTGCCATTTCATTTTTCCCCACCTGCTCTGGCCCGTATCCACTGTCCCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR TCA 90 bp ACCAGAGTGGGACAGTGGATACGGGCCAGAGCAGGTGGGGAAAAATaGAATGGCAGAGCCCAGACTATGCATGGCTGGGAATGCCAGGCA +
Preference number: 1 (lower is better)
Translates to: TRVGQWIRARAGGEK*NGRAQTMHGWECQA
Trigger: TGCCTGGCATTCCCAGCCATGCATAGTCTGGGCTCTGCCATTTCATTTTTCCCCACCTGCTCTGGCCCGTATCCACTGTCCCACTCTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR CCA 90 bp ATTCCCGAGGGTCTCTTACCTCTTGGGAAGGGAGAATCGCCACTATaGGGAGAGAGCAGCCAACTCACCCCGATGCCTAACGCATTGGAG +
Preference number: 1 (lower is better)
Translates to: IPEGLLPLGKGESPL*GESSQLTPMPNALE
Trigger: CTCCAATGCGTTAGGCATCGGGGTGAGTTGGCTGCTCTCTCCCCATAGTGGCGATTCTCCCTTCCCAAGAGGTAAGAGACCCTCGGGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR CCA 90 bp CAGGATGAAGGCCCCTGCACCCCTGCTTTGCCACCAAGCTACCTCTaGGCTAAGCTGACTCTTGAAGGGAGGAAGGAACTGATACTGGTG +
Preference number: 1 (lower is better)
Translates to: QDEGPCTPALPPSYL*AKLTLEGRKELILV
Trigger: CACCAGTATCAGTTCCTTCCTCCCTTCAAGAGTCAGCTTAGCCCAGAGGTAGCTTGGTGGCAAAGCAGGGGTGCAGGGGCCTTCATCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR TCA 90 bp GGGGACTCCATGGCAAGGAAAACAGAGGGAGCCTCGGGACCACACTaGTGCTTTCTGCCGATCTGCCTCTTATCCATTCACCTGACTCCA +
Preference number: 1 (lower is better)
Translates to: GDSMARKTEGASGPH*CFLPICLLSIHLTP
Trigger: TGGAGTCAGGTGAATGGATAAGAGGCAGATCGGCAGAAAGCATCAGTGTGGTCCCGAGGCTCCCTCTGTTTTCCTTGCCATGGAGTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR GCA 90 bp AGGCACCAGGATTCAGATTTGACCAAACAAGCATTTATTCACCCCTaGGGCAAGGCTGGGCAGTACGGCCCTAGGAACCACCGTGGGACT +
Preference number: 1 (lower is better)
Translates to: RHQDSDLTKQAFIHP*GKAGQYGPRNHRGT
Trigger: AGTCCCACGGTGGTTCCTAGGGCCGTACTGCCCAGCCTTGCCGCAGGGGTGAATAAATGCTTGTTTGGTCAAATCTGAATCCTGGTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR CCA 90 bp AGCCAACTCACCCCGATGCCTAACGCATTGGAGGTTCCCAGTCCTTaGAGCTGGAAGGGCCATGGAGGATGCCTCGTTCAACCTCATTTT +
Preference number: 1 (lower is better)
Translates to: SQLTPMPNALEVPSP*SWKGHGGCLVQPHF
Trigger: AAAATGAGGTTGAACGAGGCATCCTCCATGGCCCTTCCAGCTCCAAGGACTGGGAACCTCCAATGCGTTAGGCATCGGGGTGAGTTGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR GCA 90 bp CCCTCCAGATCCCATCAAACTGCTTTGCCTCTCTCCCAGGGCCTGTaGTGGGGTGAGGAGATTACCTACTATCACACTCACCTTCACCTT +
Preference number: 1 (lower is better)
Translates to: PSRSHQTALPLSQGL*WGEEITYYHTHLHL
Trigger: AAGGTGAAGGTGAGTGTGATAGTAGGTAATCTCCTCACCCCAGCACAGGCCCTGGGAGAGAGGCAAAGCAGTTTGATGGGATCTGGAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR TCA 90 bp CCAGACTATGCATGGCTGGGAATGCCAGGCACCAGGATTCAGATTTaGCCAAACAAGCATTTATTCACCCCTGCGGCAAGGCTGGGCAGT +
Preference number: 1 (lower is better)
Translates to: PDYAWLGMPGTRIQI*PNKHLFTPAARLGS
Trigger: ACTGCCCAGCCTTGCCGCAGGGGTGAATAAATGCTTGTTTGGTCAAATCTGAATCCTGGTGCCTGGCATTCCCAGCCATGCATAGTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR GCA 90 bp GTGGGCAAATCTTGGGGACCCTGTAGTTCCCCTCCAAGATTATCTTaGTCTGCCTTTCCTCAACCCAGAAGCTCCAGGAACACCTTGGGA +
Preference number: 1 (lower is better)
Translates to: VGKSWGPCSSPPRLS*SAFPQPRSSRNTLG
Trigger: TCCCAAGGTGTTCCTGGAGCTTCTGGGTTGAGGAAAGGCAGAGCAAGATAATCTTGGAGGGGAACTACAGGGTCCCCAAGATTTGCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
3UTR GCA 90 bp GGGCCAGAGCAGGTGGGGAAAAATGAAATGGCAGAGCCCAGACTATaGATGGCTGGGAATGCCAGGCACCAGGATTCAGATTTGACCAAA +
Preference number: 1 (lower is better)
Translates to: GPEQVGKNEMAEPRL*MAGNARHQDSDLTK
Trigger: TTTGGTCAAATCTGAATCCTGGTGCCTGGCATTCCCAGCCATGCATAGTCTGGGCTCTGCCATTTCATTTTTCCCCACCTGCTCTGGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR TCA 90 bp GGTCTCCATGGCTCCTCCCAAGCCACAAGCGTTGCCAGGTGGTGCTaGTGTCCCAGACTTTGTCCAGAGAGTGAAGAAATCATTCCAATA +
Preference number: 1 (lower is better)
Translates to: GLHGSSQATSVARWC*CPRLCPESEEIIPI
Trigger: TATTGGAATGATTTCTTCACTCTCTGGACAAAGTCTGGGACATCAGCACCACCTGGCAACGCTTGTGGCTTGGGAGGAGCCATGGAGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR TCA 90 bp CTAGAGTCCTCGGGCTTTGGGAGCAGCCGGTCTCAATGGGCTTACTaGCTCCTCTTCGCTCAAAATCACATCAGAGAAGGGTGGCAAAAA +
Preference number: 1 (lower is better)
Translates to: LESSGFGSSRSQWAY*LLFAQNHIREGWQK
Trigger: TTTTTGCCACCCTTCTCTGATGTGATTTTGAGCGAAGAGGAGTCAGTAAGCCCATTGAGACCGGCTGCTCCCAAAGCCCGAGGACTCTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR TCA 90 bp AATCTCAAATACATTCCTGCCTACTCAGTGCTGTCAGCAGAGTCCTaGCCAATGCTAGCCCTTCCCCACACAGCTAGAGTCCTCGGGCTT +
Preference number: 1 (lower is better)
Translates to: NLKYIPAYSVLSAES*PMLALPHTARVLGL
Trigger: AAGCCCGAGGACTCTAGCTGTGTGGGGAAGGGCTAGCATTGGTCAGGACTCTGCTGACAGCACTGAGTAGGCAGGAATGTATTTGAGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR GCA 90 bp GAGAGTCAGTACAAGTGTGGAATTACTCGAGAAACTTGCTTTCCATaGAGCCTTAAGCCCACTATGCAGGCAGGGGAGCCTGGAGTCCAG +
Preference number: 1 (lower is better)
Translates to: ESQYKCGITRETCFP*SLKPTMQAGEPGVQ
Trigger: CTGGACTCCAGGCTCCCCTGCCTGCATAGTGGGCTTAAGGCTGCATGGAAAGCAAGTTTCTCGAGTAATTCCACACTTGTACTGACTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR GCA 90 bp GCATTGGAGGTTCCCAGTCCTTGGAGCTGGAAGGGCCATGGAGGATaGCTCGTTCAACCTCATTTTACTTGTCCAATTAGCCCAAGTCAG +
Preference number: 1 (lower is better)
Translates to: ALEVPSPWSWKGHGG*LVQPHFTCPISPSQ
Trigger: CTGACTTGGGCTAATTGGACAAGTAAAATGAGGTTGAACGAGGCATCCTCCATGGCCCTTCCAGCTCCAAGGACTGGGAACCTCCAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR GCA 90 bp CCACTAGTGAGGAGGTGGCTCTGTAGCTGTGTAAGCATTTCGCCTTaGGCTTCTGAGTCACTTCACTCCTCAATTCCCGAGGGTCTCTTA +
Preference number: 1 (lower is better)
Translates to: PLVRRWLCSCVSISP*ASESLHSSIPEGLL
Trigger: TAAGAGACCCTCGGGAATTGAGGAGTGAAGTGACTCAGAAGCGCAAGGCGAAATGCTTACACAGCTACAGAGCCACCTCCTCACTAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR CCA 90 bp GTCAGGCTGGGAGCCTTTTCCATAGGAGGTGATGTGGGCAAATCTTaGGGACCCTGTAGTTCCCCTCCAAGATTATCTTGCTCTGCCTTT +
Preference number: 1 (lower is better)
Translates to: VRLGAFSIGGDVGKS*GPCSSPPRLSCSAF
Trigger: AAAGGCAGAGCAAGATAATCTTGGAGGGGAACTACAGGGTCCCCAAGATTTGCCCACATCACCTCCTATGGAAAAGGCTCCCAGCCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
3UTR CCA 90 bp AAGCTGCCACGGGGAACCCTAATGTTAAGTAGGCACAAGAAACAGTaGGTCTCTCATCCAAGCTGGGTGCAGGATAAAACCTGGGAGGAG +
Preference number: 1 (lower is better)
Translates to: KLPRGTLMLSRHKKQ*VSHPSWVQDKTWEE
Trigger: CTCCTCCCAGGTTTTATCCTGCACCCAGCTTGGATGAGAGACCCACTGTTTCTTGTGCCTACTTAACATTAGGGTTCCCCGTGGCAGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR CCA 90 bp GCTGCCTGGGACCGGTGGAGAGGAAACAGCAGAATCTATGCAGAATaGGAACCTGCACCTTTTCTGTCTCTCTATTCACAGGATGGGGAT +
Preference number: 1 (lower is better)
Translates to: AAWDRWRGNSRIYAE*EPAPFLSLYSQDGD
Trigger: ATCCCCATCCTGTGAATAGAGAGACAGAAAAGGTGCAGGTTCCCATTCTGCATAGATTCTGCTGTTTCCTCTCCACCGGTCCCAGGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR CCA 90 bp CTCTGTACGTCCATCCATTCATCCACTGTCAGCACCGAGCAACATTaGATATTCACCTGCAGGGTGCTAGGGAACTGTGTGGTGGCAACA +
Preference number: 1 (lower is better)
Translates to: LCTSIHSSTVSTEQH*IFTCRVLGNCVVAT
Trigger: TGTTGCCACCACACAGTTCCCTAGCACCCTGCAGGTGAATATCCAATGTTGCTCGGTGCTGACAGTGGATGAATGGATGGACGTACAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR TCA 90 bp CTCACCCTGCCTCCTTTGGAAAGCAGACTCCAGGGAGAGAACGTCTaGCACTCACATCTTACTGTAGGTTATGTTGGCTCGGAGGAGTTA +
Preference number: 1 (lower is better)
Translates to: LTLPPLESRLQGENV*HSHLTVGYVGSEEL
Trigger: TAACTCCTCCGAGCCAACATAACCTACAGTAAGATGTGAGTGTCAGACGTTCTCTCCCTGGAGTCTGCTTTCCAAAGGAGGCAGGGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR TCA 90 bp GTTCTGTGTGATCTAGAACACCCAGGGCAAAGGGCGGCACATCTATaGCACTTGTGCTTCTTCAAGTACTTCAGTGAGTCCAGGCCTCCT +
Preference number: 1 (lower is better)
Translates to: VLCDLEHPGQRAAHL*HLCFFKYFSESRPP
Trigger: AGGAGGCCTGGACTCACTGAAGTACTTGAAGAAGCACAAGTGTCATAGATGTGCCGCCCTTTGCCCTGGGTGTTCTAGATCACACAGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR TCA 90 bp CCCCTGGCTAGTCTGATTCTTAGTCCAGCTGAAACGTGTTCTGTGTaGTCTAGAACACCCAGGGCAAAGGGCGGCACATCTATGACACTT +
Preference number: 1 (lower is better)
Translates to: PLASLILSPAETCSV*SRTPRAKGGTSMTL
Trigger: AAGTGTCATAGATGTGCCGCCCTTTGCCCTGGGTGTTCTAGATCACACAGAACACGTTTCAGCTGGACTAAGAATCAGACTAGCCAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR GCA 90 bp ATACGTGGGGAGAGTCAGTACAAGTGTGGAATTACTCGAGAAACTTaGTTTCCATGCAGCCTTAAGCCCACTATGCAGGCAGGGGAGCCT +
Preference number: 1 (lower is better)
Translates to: IRGESQYKCGITRET*FPCSLKPTMQAGEP
Trigger: AGGCTCCCCTGCCTGCATAGTGGGCTTAAGGCTGCATGGAAAGCAAGTTTCTCGAGTAATTCCACACTTGTACTGACTCTCCCCACGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR CCA 90 bp TCAAAGAAAATGCCGCTCTCTGGGCAAGAGAGAAGGGATGCTCCCTaGGCAAGAGCAGGGAGAGAGAAGTTTATGAGGAAACTGAACAGG +
Preference number: 1 (lower is better)
Translates to: SKKMPLSGQERRDAP*ARAGREKFMRKLNR
Trigger: CCTGTTCAGTTTCCTCATAAACTTCTCTCTCCCTGCTCTTGCCCAGGGAGCATCCCTTCTCTCTTGCCCAGAGAGCGGCATTTTCTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR GCA 90 bp AGGAAAAGCTGCCTGGGACCGGTGGAGAGGAAACAGCAGAATCTATaGAGAATGGGAACCTGCACCTTTTCTGTCTCTCTATTCACAGGA +
Preference number: 1 (lower is better)
Translates to: RKSCLGPVERKQQNL*RMGTCTFSVSLFTG
Trigger: TCCTGTGAATAGAGAGACAGAAAAGGTGCAGGTTCCCATTCTGCATAGATTCTGCTGTTTCCTCTCCACCGGTCCCAGGCAGCTTTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR TCA 90 bp GGGAGCAGGGAGGACCCTAACAATTTTTCCGAAGGGAAGTATCTATaGCGCATACGTGGGGAGAGTCAGTACAAGTGTGGAATTACTCGA +
Preference number: 1 (lower is better)
Translates to: GSREDPNNFSEGKYL*RIRGESQYKCGITR
Trigger: TCGAGTAATTCCACACTTGTACTGACTCTCCCCACGTATGCGTCATAGATACTTCCCTTCGGAAAAATTGTTAGGGTCCTCCCTGCTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR TCA 90 bp AGGAATTACATGCAAGAGAGAGCTATGCTCGGCTTTAACTCGCTCTaGGGACTTATCCTCTGTACGTCCATCCATTCATCCACTGTCAGC +
Preference number: 1 (lower is better)
Translates to: RNYMQERAMLGFNSL*GLILCTSIHSSTVS
Trigger: GCTGACAGTGGATGAATGGATGGACGTACAGAGGATAAGTCCTCAGAGCGAGTTAAAGCCGAGCATAGCTCTCTCTTGCATGTAATTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR GCA 90 bp GGTTTTAGGGCAGGAAATGACTCTGTATGGTACTCTGGTGGGGGATaGATGTCATTACGCATTTGTCCAAACCCACAGAATGTACAACGC +
Preference number: 1 (lower is better)
Translates to: GFRAGNDSVWYSGGG*MSLRICPNPQNVQR
Trigger: GCGTTGTACATTCTGTGGGTTTGGACAAATGCGTAATGACATGCATCCCCCACCAGAGTACCATACAGAGTCATTTCCTGCCCTAAAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR CCA 90 bp TACCTACTATCACACTCACCTTCACCTTTCCGATTCTGGCCTATTTaGCCAGAATCCAGGTTCTACTCCATGTCAGCAGACAACCCAACA +
Preference number: 1 (lower is better)
Translates to: YLLSHSPSPFRFWPI*PESRFYSMSADNPT
Trigger: TGTTGGGTTGTCTGCTGACATGGAGTAGAACCTGGATTCTGGCCAAATAGGCCAGAATCGGAAAGGTGAAGGTGAGTGTGATAGTAGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR CCA 90 bp CTAAGTGGACACAGACACATTACGAGATATGGGCTACAGCATTTGTaGATTCACAACTCTGCCTCCACGCGCCAGAAATCAACAGTCATG +
Preference number: 1 (lower is better)
Translates to: LSGHRHITRYGLQHL*IHNSASTRQKSTVM
Trigger: CATGACTGTTGATTTCTGGCGCGTGGAGGCAGAGTTGTGAATCCACAAATGCTGTAGCCCATATCTCGTAATGTGTCTGTGTCCACTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR TCA 90 bp ACTACAAACTATACTACACACACATGCACACACACAGCCAGGTCGTaGGGCTCTAAGTGGACACAGACACATTACGAGATATGGGCTACA +
Preference number: 1 (lower is better)
Translates to: TTNYTTHTCTHTARS*GSKWTQTHYEIWAT
Trigger: TGTAGCCCATATCTCGTAATGTGTCTGTGTCCACTTAGAGCCTCACGACCTGGCTGTGTGTGTGCATGTGTGTGTAGTATAGTTTGTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR CCA 90 bp AAACGGATTCCTTTGGATCAAGAAATCTACTCACCCTGCCTCCTTTaGAAAGCAGACTCCAGGGAGAGAACGTCTGACACTCACATCTTA +
Preference number: 1 (lower is better)
Translates to: KRIPLDQEIYSPCLL*KADSRERTSDTHIL
Trigger: TAAGATGTGAGTGTCAGACGTTCTCTCCCTGGAGTCTGCTTTCCAAAGGAGGCAGGGTGAGTAGATTTCTTGATCCAAAGGAATCCGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR CCA 90 bp AAGAAACAGTGGGTCTCTCATCCAAGCTGGGTGCAGGATAAAACCTaGGAGGAGCTAGTGAGGAAAGAACATGTTTGTGGCTCAAGATTT +
Preference number: 1 (lower is better)
Translates to: KKQWVSHPSWVQDKT*EELVRKEHVCGSRF
Trigger: AAATCTTGAGCCACAAACATGTTCTTTCCTCACTAGCTCCTCCCAGGTTTTATCCTGCACCCAGCTTGGATGAGAGACCCACTGTTTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR GCA 90 bp ACTGCACAATTTGCTAGCATAGGAATTACATGCAAGAGAGAGCTATaGTCGGCTTTAACTCGCTCTGAGGACTTATCCTCTGTACGTCCA +
Preference number: 1 (lower is better)
Translates to: TAQFASIGITCKREL*SALTRSEDLSSVRP
Trigger: TGGACGTACAGAGGATAAGTCCTCAGAGCGAGTTAAAGCCGAGCATAGCTCTCTCTTGCATGTAATTCCTATGCTAGCAAATTGTGCAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR-3UTR TCA 90 bp GTCAGGCTGGGAGCCTTTTCCATAGGAGGTGATGTGGGCAAATCTTGGGGACCCTGGTCGGGGTGGGCGTaGGGTGAGCCCCTCCTCAGA +
Preference number: 2 (lower is better)
Translates to: VRLGAFSIGGDVGKSWGPWSGWA*GEPLLR
Trigger: TCTGAGGAGGGGCTCACCTCACGCCCACCCCGACCA...GGGTCCCCAAGATTTGCCCACATCACCTCCTATGGAAAAGGCTCCCAGCCTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
3UTR-3UTR TCA 90 bp GAGAGAGAACCCAACTCTGAAAAACGTCCAGCAGACAGGACTGTGGGAGGCCAAGCCCGCTGGGCCTGCTaGTGCCACAGGCCCACCTCC +
Preference number: 2 (lower is better)
Translates to: EREPNSEKRPADRTVGGQARWAC*CHRPTS
Trigger: GGAGGTGGGCCTGTGGCATCAGCAGGCCCAGCGGGC...TTGGCCTCCCACAGTCCTGTCTGCTGGACGTTTTTCAGAGTTGGGTTCTCTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
3UTR-3UTR CCA 90 bp GCACTAGCAAAGGCCTGGAGATGGCGGAGCGCAGCGTGGGAGAGATCGAGAGCACCCAGTCCTTGGAGCTaGAAGGGCCATGGAGGATGC +
Preference number: 2 (lower is better)
Translates to: ALAKAWRWRSAAWERSRAPSPWS*KGHGGC
Trigger: GCATCCTCCATGGCCCTTCCAGCTCCAAGGACTGGG...TGCTCTCGATCTCTCCCACGCTGCGCTCCGCCATCTCCAGGCCTTTGCTAGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR-3UTR GCA 90 bp GGGCTTGGAAGGGCAGGACTCACTGATGCTAGACCAAGGGCCAGGGTACCTCCCAAAAAGCCTTGGGGGTaGAGGAGCCTCCATGCCTGG +
Preference number: 2 (lower is better)
Translates to: GLGRAGLTDARPRARVPPKKPWG*RSLHAW
Trigger: CCAGGCATGGAGGCTCCTGCACCCCCAAGGCTTTTT...GGGAGGTACCCTGGCCCTTGGTCTAGCATCAGTGAGTCCTGCCCTTCCAAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR-3UTR CCA 90 bp GGCCGGGCGCTGGAGAACAGACAGTTCACAGGCGCTCAGCTGCACCAGTGTGGACAGACTATGCATGGCTaGGAATGCCAGGCACCAGGA +
Preference number: 2 (lower is better)
Translates to: GRALENRQFTGAQLHQCGQTMHG*ECQAPG
Trigger: TCCTGGTGCCTGGCATTCCCAGCCATGCATAGTCTG...TCCACACTGGTGCAGCTGAGCGCCTGTGAACTGTCTGTTCTCCAGCGCCCGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR CAA 90 bp CCACTATGGGGAGAGAGCAGCCAACTCACCCCGATGCCTAACGCATaGGAGGTTCCCAGTCCTTGGAGCTGGAAGGGCCATGGAGGATGC +
Preference number: 2 (lower is better)
Translates to: PLWGESSQLTPMPNA*EVPSPWSWKGHGGC
Trigger: GCATCCTCCATGGCCCTTCCAGCTCCAAGGACTGGGAACCTCCAATGCGTTAGGCATCGGGGTGAGTTGGCTGCTCTCTCCCCATAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR-3UTR TCA 90 bp CCTGAGAGACACCCCATGATTCTCTGCCCCTGGCTGACACAAGAGAAGACAAAGTGGTCGGGGTGGGCGTaGGGTGAGCCCCTCCTCAGA +
Preference number: 2 (lower is better)
Translates to: PERHPMILCPWLTQEKTKWSGWA*GEPLLR
Trigger: TCTGAGGAGGGGCTCACCTCACGCCCACCCCGACCA...CTTTGTCTTCTCTTGTGTCAGCCAGGGGCAGAGAATCATGGGGTGTCTCTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
3UTR-3UTR TCA 90 bp CCAAGATTATCTTGCTCTGCCTTTCCTCAACCCAGAAGCTCCAGGAACACCTTGGCCCGCTGGGCCTGCTaGTGCCACAGGCCCACCTCC +
Preference number: 2 (lower is better)
Translates to: PRLSCSAFPQPRSSRNTLARWAC*CHRPTS
Trigger: GGAGGTGGGCCTGTGGCATCAGCAGGCCCAGCGGGC...CAAGGTGTTCCTGGAGCTTCTGGGTTGAGGAAAGGCAGAGCAAGATAATCTTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
3UTR-3UTR CCA 90 bp GGCCGGGCGCTGGAGAACAGACAGTTCACAGGCGCTCAGCTGCACCAGTGTGGATCCGTGGGAAGGTTCTaGATAAGCTTTGAGGGCCCT +
Preference number: 2 (lower is better)
Translates to: GRALENRQFTGAQLHQCGSVGRF*ISFEGP
Trigger: AGGGCCCTCAAAGCTTATCCAGAACCTTCCCACGGA...TCCACACTGGTGCAGCTGAGCGCCTGTGAACTGTCTGTTCTCCAGCGCCCGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR CAA 90 bp TGGGTTGAGTATAAGCCAGAGGCCATAAAGCACAGCCAAAAAGCCTaGGGGGTGCAGGAGCCTCCATGCCTGGGCCCTGCCCTCACTCAG +
Preference number: 2 (lower is better)
Translates to: WVEYKPEAIKHSQKA*GVQEPPCLGPALTQ
Trigger: CTGAGTGAGGGCAGGGCCCAGGCATGGAGGCTCCTGCACCCCCAAGGCTTTTTGGCTGTGCTTTATGGCCTCTGGCTTATACTCAACCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR-3UTR TCA 90 bp AAGGGGTCTCCATGGCTCCTCCCAAGCCACAAGCGTTGCCAGGTGGTGCTGATGGCACAGGTGAGATGCTaGTTGGTGAGACCTCCCTCA +
Preference number: 2 (lower is better)
Translates to: KGSPWLLPSHKRCQVVLMAQVRC*LVRPPS
Trigger: TGAGGGAGGTCTCACCAATCAGCATCTCACCTGTGC...CATCAGCACCACCTGGCAACGCTTGTGGCTTGGGAGGAGCCATGGAGACCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR-3UTR TCA 90 bp CTTTCCCACAGGACCCCAACCGGCCAGCTGCCATTTTCTGGTCATGAAGAGGAACCACACGTGGGGCTATaGGCTGAGGCCGTCCTGAGA +
Preference number: 2 (lower is better)
Translates to: LSHRTPTGQLPFSGHEEEPHVGL*AEAVLR
Trigger: TCTCAGGACGGCCTCAGCTCATAGCCCCACGTGTGG...TTCCTCTTCATGACCAGAAAATGGCAGCTGGCCGGTTGGGGTCCTGTGGGAAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR-3UTR TCA 90 bp GCACTAGCAAAGGCCTGGAGATGGCGGAGCGCAGCGTGGGAGAGATCGAGAGCACAGCCTGTCCATGCCTaGGGACCATGTAAGTCTTTC +
Preference number: 2 (lower is better)
Translates to: ALAKAWRWRSAAWERSRAQPVHA*GPCKSF
Trigger: GAAAGACTTACATGGTCCTCAGGCATGGACAGGCTG...TGCTCTCGATCTCTCCCACGCTGCGCTCCGCCATCTCCAGGCCTTTGCTAGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR CAA 90 bp CCAGAACCCAAAGGGGTCTCCATGGCTCCTCCCAAGCCACAAGCGTaGCCAGGTGGTGCTGATGTCCCAGACTTTGTCCAGAGAGTGAAG +
Preference number: 2 (lower is better)
Translates to: PEPKGVSMAPPKPQA*PGGADVPDFVQRVK
Trigger: CTTCACTCTCTGGACAAAGTCTGGGACATCAGCACCACCTGGCAACGCTTGTGGCTTGGGAGGAGCCATGGAGACCCCTTTGGGTTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR-3UTR TCA 90 bp GTCAGGCTGGGAGCCTTTTCCATAGGAGGTGATGTGGGCAAATCTTGGGGACCCCAGACCCCATCTCCTTaGGGAGCTCAGGCTCTTGGA +
Preference number: 2 (lower is better)
Translates to: VRLGAFSIGGDVGKSWGPQTPSP*GAQALG
Trigger: TCCAAGAGCCTGAGCTCCTCAAGGAGATGGGGTCTG...GGGTCCCCAAGATTTGCCCACATCACCTCCTATGGAAAAGGCTCCCAGCCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
3UTR-3UTR TCA 90 bp TCCATGTCTATATCAGCCCTAATGGGCAGAGAGGCTGGGGAATGCCAGCCTGTCCCCACCTCAGCATCCTaGGTACCTGGGACCACAGGT +
Preference number: 2 (lower is better)
Translates to: SMSISALMGREAGECQPVPTSAS*VPGTTG
Trigger: ACCTGTGGTCCCAGGTACTCAGGATGCTGAGGTGGG...GACAGGCTGGCATTCCCCAGCCTCTCTGCCCATTAGGGCTGATATAGACATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR-3UTR GCA 90 bp CTTTCCCACAGGACCCCAACCGGCCAGCTGCCATTTTCTGGTCATGAAGAGGAACTCCCTGCACATCCGTaGACACCACACGTGGGGCTA +
Preference number: 2 (lower is better)
Translates to: LSHRTPTGQLPFSGHEEELPAHP*TPHVGL
Trigger: TAGCCCCACGTGTGGTGTGCACGGATGTGCAGGGAG...TTCCTCTTCATGACCAGAAAATGGCAGCTGGCCGGTTGGGGTCCTGTGGGAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR-3UTR CCA 90 bp CACAGGCGCTCAGCTGCACCAGTGTGGAGGGAAGGGTGGTTCAGATGTGGCATTAGCATCCTGAGTACCTaGGACCACAGGTGCACGTCA +
Preference number: 2 (lower is better)
Translates to: HRRSAAPVWREGWFRCGISILST*DHRCTS
Trigger: TGACGTGCACCTGTGGTCCCAGGTACTCAGGATGCT...AATGCCACATCTGAACCACCCTTCCCTCCACACTGGTGCAGCTGAGCGCCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR-3UTR CCA 90 bp CACAGGCGCTCAGCTGCACCAGTGTGGAGGGAAGGGTGGTTCAGATGTGGCATTGGAGAATCGCCACTATaGGGAGAGAGCAGCCAACTC +
Preference number: 2 (lower is better)
Translates to: HRRSAAPVWREGWFRCGIGESPL*GESSQL
Trigger: GAGTTGGCTGCTCTCTCCCCATAGTGGCGATTCTCC...AATGCCACATCTGAACCACCCTTCCCTCCACACTGGTGCAGCTGAGCGCCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR-3UTR TCA 90 bp GTCAGGCTGGGAGCCTTTTCCATAGGAGGTGATGTGGGCAAATCTTGGGGACCCGCACAGGTGAGATGCTaGTTGGTGAGACCTCCCTCA +
Preference number: 2 (lower is better)
Translates to: VRLGAFSIGGDVGKSWGPAQVRC*LVRPPS
Trigger: TGAGGGAGGTCTCACCAATCAGCATCTCACCTGTGC...GGGTCCCCAAGATTTGCCCACATCACCTCCTATGGAAAAGGCTCCCAGCCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
3UTR-3UTR GCA 90 bp CTCAACCCAGAAGCTCCAGGAACACCTTGGGACCCTCAGAAGAAAGACATCAAAGAGGTGGGAAGCTGCTaGAGGGACCACACTCGCCCG +
Preference number: 2 (lower is better)
Translates to: LNPEAPGTPWDPQKKDIKEVGSC*RDHTRP
Trigger: CGGGCGAGTGTGGTCCCTGCAGCAGCTTCCCACCTC...TTTGATGTCTTTCTTCTGAGGGTCCCAAGGTGTTCCTGGAGCTTCTGGGTTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
3UTR-3UTR GCA 90 bp GTGGGGAAAAATGAAATGGCAGAGCCCAGACTATGCATGGCTGGGAATGCCAGGAGGCCCCTGCACCCCTaGTTTGCCACCAAGCTACCT +
Preference number: 2 (lower is better)
Translates to: VGKNEMAEPRLCMAGNARRPLHP*FATKLP
Trigger: AGGTAGCTTGGTGGCAAAGCAGGGGTGCAGGGGCCT...CCTGGCATTCCCAGCCATGCATAGTCTGGGCTCTGCCATTTCATTTTTCCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR-3UTR GCA 90 bp GTGGGGAAAAATGAAATGGCAGAGCCCAGACTATGCATGGCTGGGAATGCCAGGCAGGATGAAGGCCCCTaGACCCCTGCTTTGCCACCA +
Preference number: 2 (lower is better)
Translates to: VGKNEMAEPRLCMAGNARQDEGP*TPALPP
Trigger: TGGTGGCAAAGCAGGGGTGCAGGGGCCTTCATCCTG...CCTGGCATTCCCAGCCATGCATAGTCTGGGCTCTGCCATTTCATTTTTCCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR-3UTR CCA 90 bp CTGGATGATGACAGTGTTCCACTCTCTCATCCAGGCGTGGTTGCGTGGGCATACGAGGTTCCCAGTCCTTaGAGCTGGAAGGGCCATGGA +
Preference number: 2 (lower is better)
Translates to: LDDDSVPLSHPGVVAWAYEVPSP*SWKGHG
Trigger: TCCATGGCCCTTCCAGCTCCAAGGACTGGGAACCTC...GTATGCCCACGCAACCACGCCTGGATGAGAGAGTGGAACACTGTCATCATCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR-3UTR CCA 90 bp CTGGATGATGACAGTGTTCCACTCTCTCATCCAGGCGTGGTTGCGTGGGCATACAGAAGGGATGCTCCCTaGGCAAGAGCAGGGAGAGAG +
Preference number: 2 (lower is better)
Translates to: LDDDSVPLSHPGVVAWAYRRDAP*ARAGRE
Trigger: CTCTCTCCCTGCTCTTGCCCAGGGAGCATCCCTTCT...GTATGCCCACGCAACCACGCCTGGATGAGAGAGTGGAACACTGTCATCATCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR-3UTR TCA 90 bp GAGAGAGAACCCAACTCTGAAAAACGTCCAGCAGACAGGACTGTGGGAGGCCAACAGACCCCATCTCCTTaGGGAGCTCAGGCTCTTGGA +
Preference number: 2 (lower is better)
Translates to: EREPNSEKRPADRTVGGQQTPSP*GAQALG
Trigger: TCCAAGAGCCTGAGCTCCTCAAGGAGATGGGGTCTG...TTGGCCTCCCACAGTCCTGTCTGCTGGACGTTTTTCAGAGTTGGGTTCTCTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
3UTR-3UTR TCA 90 bp CACCTTGGCTTAGCCTGGGAGGCGCTGCCATCTAAGGTGATGTTTTCTCAGAGACAGACCCCATCTCCTTaGGGAGCTCAGGCTCTTGGA +
Preference number: 2 (lower is better)
Translates to: HLGLAWEALPSKVMFSQRQTPSP*GAQALG
Trigger: TCCAAGAGCCTGAGCTCCTCAAGGAGATGGGGTCTG...TCTCTGAGAAAACATCACCTTAGATGGCAGCGCCTCCCAGGCTAAGCCAAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
3UTR-3UTR GCA 90 bp CTCAACCCAGAAGCTCCAGGAACACCTTGGGACCCTCAGAAGAAAGACATCAAACTGCTTCCTGCCCTTTaGTGTCCCCCGACCCCTCGT +
Preference number: 2 (lower is better)
Translates to: LNPEAPGTPWDPQKKDIKLLPAL*CPPTPR
Trigger: ACGAGGGGTCGGGGGACAGCAAAGGGCAGGAAGCAG...TTTGATGTCTTTCTTCTGAGGGTCCCAAGGTGTTCCTGGAGCTTCTGGGTTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
3UTR-3UTR GCA 90 bp GACCGGTGGAGAGGAAACAGCAGAATCTATGCAGAATGGGAACCTGCACCTTTTCTCCAGGGAGGCGACTaGCAAGTCCCAGAACCAGGG +
Preference number: 2 (lower is better)
Translates to: DRWRGNSRIYAEWEPAPFLQGGD*QVPEPG
Trigger: CCCTGGTTCTGGGACTTGGCAGTCGCCTCCCTGGAG...AAAAGGTGCAGGTTCCCATTCTGCATAGATTCTGCTGTTTCCTCTCCACCGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR-3UTR GCA 90 bp GCACTAGCAAAGGCCTGGAGATGGCGGAGCGCAGCGTGGGAGAGATCGAGAGCAGGGGTCTCCTTATATTaGCCCAGATCATCTCAAACT +
Preference number: 2 (lower is better)
Translates to: ALAKAWRWRSAAWERSRAGVSLY*PRSSQT
Trigger: AGTTTGAGATGATCTGGGGCAATATAAGGAGACCCC...TGCTCTCGATCTCTCCCACGCTGCGCTCCGCCATCTCCAGGCCTTTGCTAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR-3UTR CCA 90 bp CATGCACACACACAGCCAGGTCGTGAGGCTCTAAGTGGACACAGACACATTACGGCGCTGGGGACTCCATaGCAAGGAAAACAGAGGGAG +
Preference number: 2 (lower is better)
Translates to: HAHTQPGREALSGHRHITALGTP*QGKQRE
Trigger: CTCCCTCTGTTTTCCTTGCCATGGAGTCCCCAGCGC...CGTAATGTGTCTGTGTCCACTTAGAGCCTCACGACCTGGCTGTGTGTGTGCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR-3UTR CCA 90 bp GTCAGCACCGAGCAACATTGGATATTCACCTGCAGGGTGCTAGGGAACTGTGTGCTCTGCTGGGGGATATaGATAGGAGGGGAGGCTGTG +
Preference number: 2 (lower is better)
Translates to: VSTEQHWIFTCRVLGNCVLCWGI*IGGEAV
Trigger: CACAGCCTCCCCTCCTATCCATATCCCCCAGCAGAG...CACACAGTTCCCTAGCACCCTGCAGGTGAATATCCAATGTTGCTCGGTGCTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR-3UTR CCA 90 bp GTGGGGAAAAATGAAATGGCAGAGCCCAGACTATGCATGGCTGGGAATGCCAGGAATGGGCAGAGAGGCTaGGGAATGCCAGCCTGTCCA +
Preference number: 2 (lower is better)
Translates to: VGKNEMAEPRLCMAGNARNGQRG*GMPACP
Trigger: TGGACAGGCTGGCATTCCCCAGCCTCTCTGCCCATT...CCTGGCATTCCCAGCCATGCATAGTCTGGGCTCTGCCATTTCATTTTTCCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR CAA 90 bp CCCAGACTATGCATGGCTGGGAATGCCAGGCACCAGGATTCAGATTaGACCAAACAAGCATTTATTCACCCCTGCGGCAAGGCTGGGCAG +
Preference number: 2 (lower is better)
Translates to: PRLCMAGNARHQDSD*TKQAFIHPCGKAGQ
Trigger: CTGCCCAGCCTTGCCGCAGGGGTGAATAAATGCTTGTTTGGTCAAATCTGAATCCTGGTGCCTGGCATTCCCAGCCATGCATAGTCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR-3UTR TCA 90 bp CTTGCTCTGCCTTTCCTCAACCCAGAAGCTCCAGGAACACCTTGGGACCCTCAGTTCTCTGCCCCTGGCTaGCACAAGAGAAGACAAAGA +
Preference number: 2 (lower is better)
Translates to: LALPFLNPEAPGTPWDPQFSAPG*HKRRQR
Trigger: TCTTTGTCTTCTCTTGTGTCAGCCAGGGGCAGAGAA...CTGAGGGTCCCAAGGTGTTCCTGGAGCTTCTGGGTTGAGGAAAGGCAGAGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
3UTR-3UTR TCA 90 bp GCTCTGCCTTTCCTCAACCCAGAAGCTCCAGGAACACCTTGGGACCCTCAGAAGGAGAGAACCCAACTCTaGAAAACGTCCAGCAGACAG +
Preference number: 2 (lower is better)
Translates to: ALPFLNPEAPGTPWDPQKERTQL*KTSSRQ
Trigger: CTGTCTGCTGGACGTTTTTCAGAGTTGGGTTCTCTC...CTTCTGAGGGTCCCAAGGTGTTCCTGGAGCTTCTGGGTTGAGGAAAGGCAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
3UTR-3UTR TCA 90 bp CACTGTCAGCACCGAGCAACATTGGATATTCACCTGCAGGGTGCTAGGGAACTGACCTCTGGGCTAAGCTaGCTCTTGAAGGGAGGAAGG +
Preference number: 2 (lower is better)
Translates to: HCQHRATLDIHLQGARELTSGLS*LLKGGR
Trigger: CCTTCCTCCCTTCAAGAGTCAGCTTAGCCCAGAGGT...CAGTTCCCTAGCACCCTGCAGGTGAATATCCAATGTTGCTCGGTGCTGACAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR-3UTR TCA 90 bp CTGGATGATGACAGTGTTCCACTCTCTCATCCAGGCGTGGTTGCGTGGGCATACGCAGGTGGGGAAAAATaGAATGGCAGAGCCCAGACT +
Preference number: 2 (lower is better)
Translates to: LDDDSVPLSHPGVVAWAYAGGEK*NGRAQT
Trigger: AGTCTGGGCTCTGCCATTTCATTTTTCCCCACCTGC...GTATGCCCACGCAACCACGCCTGGATGAGAGAGTGGAACACTGTCATCATCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR-3UTR GCA 90 bp GAGAGAGAACCCAACTCTGAAAAACGTCCAGCAGACAGGACTGTGGGAGGCCAACACCCCATGATTCTCTaGCCCTGGCTGACACAAGAG +
Preference number: 2 (lower is better)
Translates to: EREPNSEKRPADRTVGGQHPMIL*PWLTQE
Trigger: CTCTTGTGTCAGCCAGGGGCAGAGAATCATGGGGTG...TTGGCCTCCCACAGTCCTGTCTGCTGGACGTTTTTCAGAGTTGGGTTCTCTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
3UTR-3UTR GCA 90 bp GTAGTTCCCCTCCAAGATTATCTTGCTCTGCCTTTCCTCAACCCAGAAGCTCCACTGCATCCTGCTTCCTaGCCTTTGCTGTCCCCCGAC +
Preference number: 2 (lower is better)
Translates to: VVPLQDYLALPFLNPEAPLHPAS*PLLSPD
Trigger: GTCGGGGGACAGCAAAGGGCAGGAAGCAGGATGCAG...TGGAGCTTCTGGGTTGAGGAAAGGCAGAGCAAGATAATCTTGGAGGGGAACTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
3UTR-3UTR GCA 90 bp AAATCTTGGGGACCCTGTAGTTCCCCTCCAAGATTATCTTGCTCTGCCTTTCCTCACAGGCCCACCTCCTaGCAGCCCTGCATCCTGCTT +
Preference number: 2 (lower is better)
Translates to: KSWGPCSSPPRLSCSAFPHRPTS*QPCILL
Trigger: AAGCAGGATGCAGGGCTGGCAGGAGGTGGGCCTGTG...AGGAAAGGCAGAGCAAGATAATCTTGGAGGGGAACTACAGGGTCCCCAAGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
3UTR-3UTR GCA 90 bp CTTTCCCACAGGACCCCAACCGGCCAGCTGCCATTTTCTGGTCATGAAGAGGAATTCCTGCCTACTCAGTaGTGTCAGCAGAGTCCTGAC +
Preference number: 2 (lower is better)
Translates to: LSHRTPTGQLPFSGHEEEFLPTQ*CQQSPD
Trigger: GTCAGGACTCTGCTGACAGCACTGAGTAGGCAGGAA...TTCCTCTTCATGACCAGAAAATGGCAGCTGGCCGGTTGGGGTCCTGTGGGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR-3UTR GCA 90 bp CACTGTCAGCACCGAGCAACATTGGATATTCACCTGCAGGGTGCTAGGGAACTGTCACCTAGGCTGAAGTaGCGTGCTGCCATCATGGCT +
Preference number: 2 (lower is better)
Translates to: HCQHRATLDIHLQGARELSPRLK*RAAIMA
Trigger: AGCCATGATGGCAGCACGGCACTTCAGCCTAGGTGA...CAGTTCCCTAGCACCCTGCAGGTGAATATCCAATGTTGCTCGGTGCTGACAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR-3UTR CCA 90 bp AGTGATGGAAAGGAAAAGCTGCCTGGGACCGGTGGAGAGGAAACAGCAGAATCTCACCTTGGCTTAGCCTaGGAGGCGCTGCCATCTAAG +
Preference number: 2 (lower is better)
Translates to: SDGKEKLPGTGGEETAESHLGLA*EALPSK
Trigger: CTTAGATGGCAGCGCCTCCCAGGCTAAGCCAAGGTG...AGATTCTGCTGTTTCCTCTCCACCGGTCCCAGGCAGCTTTTCCTTTCCATCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR-3UTR CCA 90 bp TCACCAACCAAGTCTCCATCCAGCTCCGTCCTCTGGGGAGGACATGCCCTTCACATGATTCTCTGCCCCTaGCTGACACAAGAGAAGACA +
Preference number: 2 (lower is better)
Translates to: SPTKSPSSSVLWGGHALHMILCP*LTQEKT
Trigger: TGTCTTCTCTTGTGTCAGCCAGGGGCAGAGAATCAT...GTGAAGGGCATGTCCTCCCCAGAGGACGGAGCTGGATGGAGACTTGGTTGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
3UTR-3UTR CCA 90 bp CTCAACCCAGAAGCTCCAGGAACACCTTGGGACCCTCAGAAGAAAGACATCAAATCCAGCTCCGTCCTCTaGGGAGGACATGCCCTTCAC +
Preference number: 2 (lower is better)
Translates to: LNPEAPGTPWDPQKKDIKSSSVL*GGHALH
Trigger: GTGAAGGGCATGTCCTCCCCAGAGGACGGAGCTGGA...TTTGATGTCTTTCTTCTGAGGGTCCCAAGGTGTTCCTGGAGCTTCTGGGTTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
3UTR-3UTR CCA 90 bp CCAAGATTATCTTGCTCTGCCTTTCCTCAACCCAGAAGCTCCAGGAACACCTTGTCCAGCTCCGTCCTCTaGGGAGGACATGCCCTTCAC +
Preference number: 2 (lower is better)
Translates to: PRLSCSAFPQPRSSRNTLSSSVL*GGHALH
Trigger: GTGAAGGGCATGTCCTCCCCAGAGGACGGAGCTGGA...CAAGGTGTTCCTGGAGCTTCTGGGTTGAGGAAAGGCAGAGCAAGATAATCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
3UTR CAA 90 bp CTTCTGAGTCACTTCACTCCTCAATTCCCGAGGGTCTCTTACCTCTaGGGAAGGGAGAATCGCCACTATGGGGAGAGAGCAGCCAACTCA +
Preference number: 2 (lower is better)
Translates to: LLSHFTPQFPRVSYL*GRENRHYGERAANS
Trigger: TGAGTTGGCTGCTCTCTCCCCATAGTGGCGATTCTCCCTTCCCAAGAGGTAAGAGACCCTCGGGAATTGAGGAGTGAAGTGACTCAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR CAA 90 bp CCTCTGTACGTCCATCCATTCATCCACTGTCAGCACCGAGCAACATaGGATATTCACCTGCAGGGTGCTAGGGAACTGTGTGGTGGCAAC +
Preference number: 2 (lower is better)
Translates to: PLYVHPFIHCQHRAT*DIHLQGARELCGGN
Trigger: GTTGCCACCACACAGTTCCCTAGCACCCTGCAGGTGAATATCCAATGTTGCTCGGTGCTGACAGTGGATGAATGGATGGACGTACAGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR-3UTR GCA 90 bp AGATTTGGGGTAAGGGGCCACTCTAACCAGAAGATTTCTAGGGTTAATGGGATGCACAGGCCCACCTCCTaGCAGCCCTGCATCCTGCTT +
Preference number: 2 (lower is better)
Translates to: RFGVRGHSNQKISRVNGMHRPTS*QPCILL
Trigger: AAGCAGGATGCAGGGCTGGCAGGAGGTGGGCCTGTG...CATCCCATTAACCCTAGAAATCTTCTGGTTAGAGTGGCCCCTTACCCCAAATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR-3UTR GCA 90 bp GCAGCCGGTCTCAATGGGCTTACTGACTCCTCTTCGCTCAAAATCACATCAGAGATGGAAAGGAAAAGCTaGCTGGGACCGGTGGAGAGG +
Preference number: 2 (lower is better)
Translates to: AAGLNGLTDSSSLKITSEMERKS*LGPVER
Trigger: CCTCTCCACCGGTCCCAGGCAGCTTTTCCTTTCCAT...CTCTGATGTGATTTTGAGCGAAGAGGAGTCAGTAAGCCCATTGAGACCGGCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR-3UTR GCA 90 bp CACAGGCGCTCAGCTGCACCAGTGTGGAGGGAAGGGTGGTTCAGATGTGGCATTAGGTGCACGTCACCATaGCTGGCTGATTTTTCAATT +
Preference number: 2 (lower is better)
Translates to: HRRSAAPVWREGWFRCGIRCTSP*LADFSI
Trigger: AATTGAAAAATCAGCCAGGCATGGTGACGTGCACCT...AATGCCACATCTGAACCACCCTTCCCTCCACACTGGTGCAGCTGAGCGCCTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR-3UTR CCA 90 bp CATGCACACACACAGCCAGGTCGTGAGGCTCTAAGTGGACACAGACACATTACGAAAGGAAAAGCTGCCTaGGACCGGTGGAGAGGAAAC +
Preference number: 2 (lower is better)
Translates to: HAHTQPGREALSGHRHITKGKAA*DRWRGN
Trigger: GTTTCCTCTCCACCGGTCCCAGGCAGCTTTTCCTTT...CGTAATGTGTCTGTGTCCACTTAGAGCCTCACGACCTGGCTGTGTGTGTGCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR-3UTR CCA 90 bp GTGGGGAAAAATGAAATGGCAGAGCCCAGACTATGCATGGCTGGGAATGCCAGGAATGCACCACTCTGCTaGGGGATATGGATAGGAGGG +
Preference number: 2 (lower is better)
Translates to: VGKNEMAEPRLCMAGNARNAPLC*GIWIGG
Trigger: CCCTCCTATCCATATCCCCCAGCAGAGTGGTGCATT...CCTGGCATTCCCAGCCATGCATAGTCTGGGCTCTGCCATTTCATTTTTCCCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR-3UTR CCA 90 bp CACTGTCAGCACCGAGCAACATTGGATATTCACCTGCAGGGTGCTAGGGAACTGCCACTAGTGAGGAGGTaGCTCTGTAGCTGTGTAAGC +
Preference number: 2 (lower is better)
Translates to: HCQHRATLDIHLQGARELPLVRR*LCSCVS
Trigger: GCTTACACAGCTACAGAGCCACCTCCTCACTAGTGG...CAGTTCCCTAGCACCCTGCAGGTGAATATCCAATGTTGCTCGGTGCTGACAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR-3UTR TCA 90 bp GTCAGCACCGAGCAACATTGGATATTCACCTGCAGGGTGCTAGGGAACTGTGTGGAAGGGAAGTATCTATaGCGCATACGTGGGGAGAGT +
Preference number: 2 (lower is better)
Translates to: VSTEQHWIFTCRVLGNCVEGKYL*RIRGES
Trigger: ACTCTCCCCACGTATGCGTCATAGATACTTCCCTTC...CACACAGTTCCCTAGCACCCTGCAGGTGAATATCCAATGTTGCTCGGTGCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR-3UTR TCA 90 bp TTTACTTGTCCAATTAGCCCAAGTCAGAGCTTCCTTCCGTGGGAAGGTTCTGGACTCTGTCACCTAGGCTaGAGTGCCGTGCTGCCATCA +
Preference number: 2 (lower is better)
Translates to: FTCPISPSQSFLPWEGSGLCHLG*SAVLPS
Trigger: TGATGGCAGCACGGCACTTCAGCCTAGGTGACAGAG...TCCAGAACCTTCCCACGGAAGGAAGCTCTGACTTGGGCTAATTGGACAAGTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR-3UTR TCA 90 bp GCATCTGGGGAAAGGCTTGATGTCAAAGCTGTCCTCCATGTCTATATCAGCCCTATATCGGTCCCCCTGTaGGTGGGGAATGATGACCAG +
Preference number: 2 (lower is better)
Translates to: ASGERLDVKAVLHVYISPISVPL*VGNDDQ
Trigger: CTGGTCATCATTCCCCACTCACAGGGGGACCGATAT...AGGGCTGATATAGACATGGAGGACAGCTTTGACATCAAGCCTTTCCCCAGATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR-3UTR GCA 90 bp CATGCACACACACAGCCAGGTCGTGAGGCTCTAAGTGGACACAGACACATTACGCAAAAAGGGGCACAATaGAATGCCACTAGCCTCCAG +
Preference number: 2 (lower is better)
Translates to: HAHTQPGREALSGHRHITQKGAQ*NATSLQ
Trigger: CTGGAGGCTAGTGGCATTGCATTGTGCCCCTTTTTG...CGTAATGTGTCTGTGTCCACTTAGAGCCTCACGACCTGGCTGTGTGTGTGCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR-3UTR CCA 90 bp AAATCTTGGGGACCCTGTAGTTCCCCTCCAAGATTATCTTGCTCTGCCTTTCCTCAGCAGACAGGACTGTaGGAGGCCAACACAAGCTCC +
Preference number: 2 (lower is better)
Translates to: KSWGPCSSPPRLSCSAFPQQTGL*EANTSS
Trigger: GGAGCTTGTGTTGGCCTCCCACAGTCCTGTCTGCTG...AGGAAAGGCAGAGCAAGATAATCTTGGAGGGGAACTACAGGGTCCCCAAGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
3UTR-3UTR CCA 90 bp AGTGATGGAAAGGAAAAGCTGCCTGGGACCGGTGGAGAGGAAACAGCAGAATCTGATGTGGGCAAATCTTaGGGACCCTGTAGTTCCCCT +
Preference number: 2 (lower is better)
Translates to: SDGKEKLPGTGGEETAESDVGKS*GPCSSP
Trigger: AGGGGAACTACAGGGTCCCCAAGATTTGCCCACATC...AGATTCTGCTGTTTCCTCTCCACCGGTCCCAGGCAGCTTTTCCTTTCCATCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR-3UTR CCA 90 bp TTTACTTGTCCAATTAGCCCAAGTCAGAGCTTCCTTCCGTGGGAAGGTTCTGGAGCCGTGCTGCCATCATaGCTTACAGCAGCCTTGACC +
Preference number: 2 (lower is better)
Translates to: FTCPISPSQSFLPWEGSGAVLPS*LTAALT
Trigger: GGTCAAGGCTGCTGTAAGCCATGATGGCAGCACGGC...TCCAGAACCTTCCCACGGAAGGAAGCTCTGACTTGGGCTAATTGGACAAGTAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR-3UTR TCA 90 bp TCTAGAACACCCAGGGCAAAGGGCGGCACATCTATGACACTTGTGCTTCTTCAACCACAGCAGAGATGGTaGCCACAAGGAAGAGCTTCA +
Preference number: 2 (lower is better)
Translates to: SRTPRAKGGTSMTLVLLQPQQRW*PQGRAS
Trigger: TGAAGCTCTTCCTTGTGGTCACCATCTCTGCTGTGG...TTGAAGAAGCACAAGTGTCATAGATGTGCCGCCCTTTGCCCTGGGTGTTCTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR-3UTR GCA 90 bp CCAAGATTATCTTGCTCTGCCTTTCCTCAACCCAGAAGCTCCAGGAACACCTTGCCTCTGGGGAGGACATaGCCTTCACTCAAAACACCA +
Preference number: 2 (lower is better)
Translates to: PRLSCSAFPQPRSSRNTLPLGRT*PSLKTP
Trigger: TGGTGTTTTGAGTGAAGGGCATGTCCTCCCCAGAGG...CAAGGTGTTCCTGGAGCTTCTGGGTTGAGGAAAGGCAGAGCAAGATAATCTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
3UTR-3UTR GCA 90 bp GACCGGTGGAGAGGAAACAGCAGAATCTATGCAGAATGGGAACCTGCACCTTTTCTCATCCAAGCTGGGTaGAGGATAAAACCTGGGAGG +
Preference number: 2 (lower is better)
Translates to: DRWRGNSRIYAEWEPAPFLIQAG*RIKPGR
Trigger: CCTCCCAGGTTTTATCCTGCACCCAGCTTGGATGAG...AAAAGGTGCAGGTTCCCATTCTGCATAGATTCTGCTGTTTCCTCTCCACCGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR-3UTR GCA 90 bp CATGCACACACACAGCCAGGTCGTGAGGCTCTAAGTGGACACAGACACATTACGCAATGGAATGGAAACTaGAAGGCATCATGTCCCAGG +
Preference number: 2 (lower is better)
Translates to: HAHTQPGREALSGHRHITQWNGN*KASCPR
Trigger: CCTGGGACATGATGCCTTGCAGTTTCCATTCCATTG...CGTAATGTGTCTGTGTCCACTTAGAGCCTCACGACCTGGCTGTGTGTGTGCATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR-3UTR GCA 90 bp CACAGGCGCTCAGCTGCACCAGTGTGGAGGGAAGGGTGGTTCAGATGTGGCATTATTACTCGAGAAACTTaGTTTCCATGCAGCCTTAAG +
Preference number: 2 (lower is better)
Translates to: HRRSAAPVWREGWFRCGIITRET*FPCSLK
Trigger: CTTAAGGCTGCATGGAAAGCAAGTTTCTCGAGTAAT...AATGCCACATCTGAACCACCCTTCCCTCCACACTGGTGCAGCTGAGCGCCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR-3UTR CCA 90 bp TGGCCTATTTGGCCAGAATCCAGGTTCTACTCCATGTCAGCAGACAACCCAACACAATTTTGGACCACATaGCACTGCCATGGGAGGAGC +
Preference number: 2 (lower is better)
Translates to: WPIWPESRFYSMSADNPTQFWTT*HCHGRS
Trigger: GCTCCTCCCATGGCAGTGCCATGTGGTCCAAAATTG...TGTTGGGTTGTCTGCTGACATGGAGTAGAACCTGGATTCTGGCCAAATAGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR-3UTR CCA 90 bp CATGCACACACACAGCCAGGTCGTGAGGCTCTAAGTGGACACAGACACATTACGAGGAAAGGGCAATTTTaGACCACATGGCACTGCCAT +
Preference number: 2 (lower is better)
Translates to: HAHTQPGREALSGHRHITRKGQF*TTWHCH
Trigger: ATGGCAGTGCCATGTGGTCCAAAATTGCCCTTTCCT...CGTAATGTGTCTGTGTCCACTTAGAGCCTCACGACCTGGCTGTGTGTGTGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR-3UTR CCA 90 bp CACAGGACCCCAACCGGCCAGCTGCCATTTTCTGGTCATGAAGAGGAATTGGGATACTGTAGGTTATGTTaGCTCGGAGGAGTTATGGGA +
Preference number: 2 (lower is better)
Translates to: HRTPTGQLPFSGHEEELGYCRLC*LGGVMG
Trigger: TCCCATAACTCCTCCGAGCCAACATAACCTACAGTA...TCCCAATTCCTCTTCATGACCAGAAAATGGCAGCTGGCCGGTTGGGGTCCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR-3UTR CCA 90 bp TTCCACTCTCTCATCCAGGCGTGGTTGCGTGGGCATACACACTTTATGAAAATTACCAGAGTGGGACAGTaGATACGGGCCAGAGCAGGT +
Preference number: 2 (lower is better)
Translates to: FHSLIQAWLRGHTHFMKITRVGQ*IRARAG
Trigger: ACCTGCTCTGGCCCGTATCCACTGTCCCACTCTGGT...AATTTTCATAAAGTGTGTATGCCCACGCAACCACGCCTGGATGAGAGAGTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR CAA 90 bp CTGTGTGCCCACAGCAGAGATGGTGACCACAAGGAAGAGCTTCATTaGAAGTGCCAAAACTATGGGAATGAGGGTCAAATAGCCCCTTCC +
Preference number: 2 (lower is better)
Translates to: LCAHSRDGDHKEELH*KCQNYGNEGQIAPS
Trigger: GGAAGGGGCTATTTGACCCTCATTCCCATAGTTTTGGCACTTCAAATGAAGCTCTTCCTTGTGGTCACCATCTCTGCTGTGGGCACACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR-3UTR TCA 90 bp AACATGAACAGACAACTGGGAGATGAGCAAGAGAGTGAGAGACACAGCAGGGACTTCTCTGCCCCTGGCTaGCACAAGAGAAGACAAAGA +
Preference number: 2 (lower is better)
Translates to: NMNRQLGDEQESERHSRDFSAPG*HKRRQR
Trigger: TCTTTGTCTTCTCTTGTGTCAGCCAGGGGCAGAGAA...GTCCCTGCTGTGTCTCTCACTCTCTTGCTCATCTCCCAGTTGTCTGTTCATGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
3UTR-3UTR TCA 90 bp ATTACGAGATATGGGCTACAGCATTTGTGGATTCACAACTCTGCCTCCACGCGCAGGGCGGCACATCTATaGCACTTGTGCTTCTTCAAG +
Preference number: 2 (lower is better)
Translates to: ITRYGLQHLWIHNSASTRRAAHL*HLCFFK
Trigger: CTTGAAGAAGCACAAGTGTCATAGATGTGCCGCCCT...GCGCGTGGAGGCAGAGTTGTGAATCCACAAATGCTGTAGCCCATATCTCGTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR-3UTR TCA 90 bp TTCCACTCTCTCATCCAGGCGTGGTTGCGTGGGCATACACACTTTATGAAAATTACTCTGGACTGGCACTaGTGGCTGAGAGTGGAGAGA +
Preference number: 2 (lower is better)
Translates to: FHSLIQAWLRGHTHFMKITLDWH*WLRVER
Trigger: TCTCTCCACTCTCAGCCATCAGTGCCAGTCCAGAGT...AATTTTCATAAAGTGTGTATGCCCACGCAACCACGCCTGGATGAGAGAGTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR-3UTR GCA 90 bp AGATTTGGGGTAAGGGGCCACTCTAACCAGAAGATTTCTAGGGTTAATGGGATGCACCCCATGATTCTCTaGCCCTGGCTGACACAAGAG +
Preference number: 2 (lower is better)
Translates to: RFGVRGHSNQKISRVNGMHPMIL*PWLTQE
Trigger: CTCTTGTGTCAGCCAGGGGCAGAGAATCATGGGGTG...CATCCCATTAACCCTAGAAATCTTCTGGTTAGAGTGGCCCCTTACCCCAAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR-3UTR GCA 90 bp GCATCTGGGGAAAGGCTTGATGTCAAAGCTGTCCTCCATGTCTATATCAGCCCTCTCAAGCAGTCCTCCTaGCTCAGCCTCCAAAATGTT +
Preference number: 2 (lower is better)
Translates to: ASGERLDVKAVLHVYISPLKQSS*LSLQNV
Trigger: AACATTTTGGAGGCTGAGGCAGGAGGACTGCTTGAG...AGGGCTGATATAGACATGGAGGACAGCTTTGACATCAAGCCTTTCCCCAGATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR-3UTR CCA 90 bp AGATTTGGGGTAAGGGGCCACTCTAACCAGAAGATTTCTAGGGTTAATGGGATGTCACCCTGCCTCCTTTaGAAAGCAGACTCCAGGGAG +
Preference number: 2 (lower is better)
Translates to: RFGVRGHSNQKISRVNGMSPCLL*KADSRE
Trigger: CTCCCTGGAGTCTGCTTTCCAAAGGAGGCAGGGTGA...CATCCCATTAACCCTAGAAATCTTCTGGTTAGAGTGGCCCCTTACCCCAAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR-3UTR CCA 90 bp GCAGCCGGTCTCAATGGGCTTACTGACTCCTCTTCGCTCAAAATCACATCAGAGGTCCCTCCCCGATTCTaGAAAATACATCCACCTAAC +
Preference number: 2 (lower is better)
Translates to: AAGLNGLTDSSSLKITSEVPPRF*KIHPPN
Trigger: GTTAGGTGGATGTATTTTCCAGAATCGGGGAGGGAC...CTCTGATGTGATTTTGAGCGAAGAGGAGTCAGTAAGCCCATTGAGACCGGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR-3UTR CCA 90 bp CTGGGCAAGAGCAGGGAGAGAGAAGTTTATGAGGAAACTGAACAGGGGCCGGGCGAGTCAGTACAAGTGTaGAATTACTCGAGAAACTTG +
Preference number: 2 (lower is better)
Translates to: LGKSREREVYEETEQGPGESVQV*NYSRNL
Trigger: CAAGTTTCTCGAGTAATTCCACACTTGTACTGACTC...GCCCGGCCCCTGTTCAGTTTCCTCATAAACTTCTCTCTCCCTGCTCTTGCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR-3UTR CCA 90 bp ACTTATCCTCTGTACGTCCATCCATTCATCCACTGTCAGCACCGAGCAACATTGACGGGCCAGAGCAGGTaGGGAAAAATGAAATGGCAG +
Preference number: 2 (lower is better)
Translates to: TYPLYVHPFIHCQHRATLTGQSR*GKMKWQ
Trigger: CTGCCATTTCATTTTTCCCCACCTGCTCTGGCCCGT...CAATGTTGCTCGGTGCTGACAGTGGATGAATGGATGGACGTACAGAGGATAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR CAA 90 bp GCTCTAAGTGGACACAGACACATTACGAGATATGGGCTACAGCATTaGTGGATTCACAACTCTGCCTCCACGCGCCAGAAATCAACAGTC +
Preference number: 2 (lower is better)
Translates to: ALSGHRHITRYGLQH*WIHNSASTRQKSTV
Trigger: GACTGTTGATTTCTGGCGCGTGGAGGCAGAGTTGTGAATCCACAAATGCTGTAGCCCATATCTCGTAATGTGTCTGTGTCCACTTAGAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR-3UTR TCA 90 bp AACATGAACAGACAACTGGGAGATGAGCAAGAGAGTGAGAGACACAGCAGGGACCGCTGCCATCTAAGGTaGTGTTTTCTCAGAGATCAC +
Preference number: 2 (lower is better)
Translates to: NMNRQLGDEQESERHSRDRCHLR*CFLRDH
Trigger: GTGATCTCTGAGAAAACATCACCTTAGATGGCAGCG...GTCCCTGCTGTGTCTCTCACTCTCTTGCTCATCTCCCAGTTGTCTGTTCATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
3UTR-3UTR TCA 90 bp TCTAGAACACCCAGGGCAAAGGGCGGCACATCTATGACACTTGTGCTTCTTCAACGCTGCCATCTAAGGTaGTGTTTTCTCAGAGATCAC +
Preference number: 2 (lower is better)
Translates to: SRTPRAKGGTSMTLVLLQRCHLR*CFLRDH
Trigger: GTGATCTCTGAGAAAACATCACCTTAGATGGCAGCG...TTGAAGAAGCACAAGTGTCATAGATGTGCCGCCCTTTGCCCTGGGTGTTCTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR-3UTR TCA 90 bp ATTACGAGATATGGGCTACAGCATTTGTGGATTCACAACTCTGCCTCCACGCGCCAGGGAGAGAACGTCTaGCACTCACATCTTACTGTA +
Preference number: 2 (lower is better)
Translates to: ITRYGLQHLWIHNSASTRQGENV*HSHLTV
Trigger: TACAGTAAGATGTGAGTGTCAGACGTTCTCTCCCTG...GCGCGTGGAGGCAGAGTTGTGAATCCACAAATGCTGTAGCCCATATCTCGTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR-3UTR TCA 90 bp GACCGGTGGAGAGGAAACAGCAGAATCTATGCAGAATGGGAACCTGCACCTTTTCCATGCCACACTGCCTaGAATTGTACCCTAAAAAGG +
Preference number: 2 (lower is better)
Translates to: DRWRGNSRIYAEWEPAPFPCHTA*NCTLKR
Trigger: CCTTTTTAGGGTACAATTTCAGGCAGTGTGGCATGG...AAAAGGTGCAGGTTCCCATTCTGCATAGATTCTGCTGTTTCCTCTCCACCGGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR-3UTR TCA 90 bp CATGCACACACACAGCCAGGTCGTGAGGCTCTAAGTGGACACAGACACATTACGAGGAAGAGCTTCATTTaGAGTGCCAAAACTATGGGA +
Preference number: 2 (lower is better)
Translates to: HAHTQPGREALSGHRHITRKSFI*SAKTMG
Trigger: TCCCATAGTTTTGGCACTTCAAATGAAGCTCTTCCT...CGTAATGTGTCTGTGTCCACTTAGAGCCTCACGACCTGGCTGTGTGTGTGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR-3UTR TCA 90 bp ATTACGAGATATGGGCTACAGCATTTGTGGATTCACAACTCTGCCTCCACGCGCCTTCAAGTACTTCAGTaGGTCCAGGCCTCCTCTTTT +
Preference number: 2 (lower is better)
Translates to: ITRYGLQHLWIHNSASTRLQVLQ*VQASSF
Trigger: AAAAGAGGAGGCCTGGACTCACTGAAGTACTTGAAG...GCGCGTGGAGGCAGAGTTGTGAATCCACAAATGCTGTAGCCCATATCTCGTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR-3UTR TCA 90 bp ACTTATCCTCTGTACGTCCATCCATTCATCCACTGTCAGCACCGAGCAACATTGATCTGGGGAAAGGCTTaGTGTCAAAGCTGTCCTCCA +
Preference number: 2 (lower is better)
Translates to: TYPLYVHPFIHCQHRATLIWGKA*CQSCPP
Trigger: TGGAGGACAGCTTTGACATCAAGCCTTTCCCCAGAT...CAATGTTGCTCGGTGCTGACAGTGGATGAATGGATGGACGTACAGAGGATAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR-3UTR CCA 90 bp CTCAACCCAGAAGCTCCAGGAACACCTTGGGACCCTCAGAAGAAAGACATCAAAATGATTCTCTGCCCCTaGCTGACACAAGAGAAGACA +
Preference number: 2 (lower is better)
Translates to: LNPEAPGTPWDPQKKDIKMILCP*LTQEKT
Trigger: TGTCTTCTCTTGTGTCAGCCAGGGGCAGAGAATCAT...TTTGATGTCTTTCTTCTGAGGGTCCCAAGGTGTTCCTGGAGCTTCTGGGTTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
3UTR-3UTR CCA 90 bp GACCGGTGGAGAGGAAACAGCAGAATCTATGCAGAATGGGAACCTGCACCTTTTAGGGGCAGAAACATCTaGGGATCTCAGGTTCTAATG +
Preference number: 2 (lower is better)
Translates to: DRWRGNSRIYAEWEPAPFRGRNI*GSQVLM
Trigger: CATTAGAACCTGAGATCCCCAGATGTTTCTGCCCCT...AAAAGGTGCAGGTTCCCATTCTGCATAGATTCTGCTGTTTCCTCTCCACCGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR CAA 90 bp TTACCTACTATCACACTCACCTTCACCTTTCCGATTCTGGCCTATTaGGCCAGAATCCAGGTTCTACTCCATGTCAGCAGACAACCCAAC +
Preference number: 2 (lower is better)
Translates to: LPTITLTFTFPILAY*ARIQVLLHVSRQPN
Trigger: GTTGGGTTGTCTGCTGACATGGAGTAGAACCTGGATTCTGGCCAAATAGGCCAGAATCGGAAAGGTGAAGGTGAGTGTGATAGTAGGTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR-3UTR TCA 90 bp TTCCACTCTCTCATCCAGGCGTGGTTGCGTGGGCATACACACTTTATGAAAATTTTCGCCTTGCGCTTCTaGGTCACTTCACTCCTCAAT +
Preference number: 2 (lower is better)
Translates to: FHSLIQAWLRGHTHFMKIFALRF*VTSLLN
Trigger: ATTGAGGAGTGAAGTGACTCAGAAGCGCAAGGCGAA...AATTTTCATAAAGTGTGTATGCCCACGCAACCACGCCTGGATGAGAGAGTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR-3UTR GCA 90 bp ATTACGAGATATGGGCTACAGCATTTGTGGATTCACAACTCTGCCTCCACGCGCCATATTAATGGGAAATaGTCGTGTTCAGTCCCTCCC +
Preference number: 2 (lower is better)
Translates to: ITRYGLQHLWIHNSASTRHINGK*SCSVPP
Trigger: GGGAGGGACTGAACACGAGCATTTCCCATTAATATG...GCGCGTGGAGGCAGAGTTGTGAATCCACAAATGCTGTAGCCCATATCTCGTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR-3UTR GCA 90 bp GCATCTGGGGAAAGGCTTGATGTCAAAGCTGTCCTCCATGTCTATATCAGCCCTGAAACTTGCTTTCCATaGAGCCTTAAGCCCACTATG +
Preference number: 2 (lower is better)
Translates to: ASGERLDVKAVLHVYISPETCFP*SLKPTM
Trigger: CATAGTGGGCTTAAGGCTGCATGGAAAGCAAGTTTC...AGGGCTGATATAGACATGGAGGACAGCTTTGACATCAAGCCTTTCCCCAGATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR-3UTR CCA 90 bp TTAGGGCAGGAAATGACTCTGTATGGTACTCTGGTGGGGGATGCATGTCATTACTCTATGACGCATACGTaGGGAGAGTCAGTACAAGTG +
Preference number: 2 (lower is better)
Translates to: LGQEMTLYGTLVGDACHYSMTHT*GESVQV
Trigger: CACTTGTACTGACTCTCCCCACGTATGCGTCATAGA...GTAATGACATGCATCCCCCACCAGAGTACCATACAGAGTCATTTCCTGCCCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR-3UTR CCA 90 bp GTGGGGAAAAATGAAATGGCAGAGCCCAGACTATGCATGGCTGGGAATGCCAGGGCACGTCACCATGCCTaGCTGATTTTTCAATTATTT +
Preference number: 2 (lower is better)
Translates to: VGKNEMAEPRLCMAGNARARHHA*LIFQLF
Trigger: AAATAATTGAAAAATCAGCCAGGCATGGTGACGTGC...CCTGGCATTCCCAGCCATGCATAGTCTGGGCTCTGCCATTTCATTTTTCCCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR-3UTR TCA 90 bp GTCAGCACCGAGCAACATTGGATATTCACCTGCAGGGTGCTAGGGAACTGTGTGACCAGGATTCAGATTTaGCCAAACAAGCATTTATTC +
Preference number: 2 (lower is better)
Translates to: VSTEQHWIFTCRVLGNCVTRIQI*PNKHLF
Trigger: GAATAAATGCTTGTTTGGTCAAATCTGAATCCTGGT...CACACAGTTCCCTAGCACCCTGCAGGTGAATATCCAATGTTGCTCGGTGCTGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR-3UTR GCA 90 bp AGAGGAATTGGGAAAAATAGACTCACTTCTGCAGGGCACTCTCTGTCACCAGGTTCTCAAATACATTCCTaGCTACTCAGTGCTGTCAGC +
Preference number: 2 (lower is better)
Translates to: RGIGKNRLTSAGHSLSPGSQIHS*LLSAVS
Trigger: GCTGACAGCACTGAGTAGGCAGGAATGTATTTGAGA...ACCTGGTGACAGAGAGTGCCCTGCAGAAGTGAGTCTATTTTTCCCAATTCCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR-3UTR CCA 90 bp AGATTTGGGGTAAGGGGCCACTCTAACCAGAAGATTTCTAGGGTTAATGGGATGTCACCTTTCCGATTCTaGCCTATTTGGCCAGAATCC +
Preference number: 2 (lower is better)
Translates to: RFGVRGHSNQKISRVNGMSPFRF*PIWPES
Trigger: GGATTCTGGCCAAATAGGCCAGAATCGGAAAGGTGA...CATCCCATTAACCCTAGAAATCTTCTGGTTAGAGTGGCCCCTTACCCCAAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR-3UTR CCA 90 bp CATTTTACTTGTCCAATTAGCCCAAGTCAGAGCTTCCTTCCGTGGGAAGGTTCTTGTATGGTACTCTGGTaGGGGATGCATGTCATTACG +
Preference number: 2 (lower is better)
Translates to: HFTCPISPSQSFLPWEGSCMVLW*GMHVIT
Trigger: CGTAATGACATGCATCCCCCACCAGAGTACCATACA...AGAACCTTCCCACGGAAGGAAGCTCTGACTTGGGCTAATTGGACAAGTAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR-3UTR GCA 90 bp GCAAAAGCAGCAGACACAGAACAGAATGATTTCATTGATATAAAGTTCCAGAAGATGCATGGCTGGGAATaGCAGGCACCAGGATTCAGA +
Preference number: 2 (lower is better)
Translates to: AKAADTEQNDFIDIKFQKMHGWE*QAPGFR
Trigger: TCTGAATCCTGGTGCCTGGCATTCCCAGCCATGCAT...CTTCTGGAACTTTATATCAATGAAATCATTCTGTTCTGTGTCTGCTGCTTTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR-3UTR TCA 90 bp GCAAAAGCAGCAGACACAGAACAGAATGATTTCATTGATATAAAGTTCCAGAAGATGCAGGACTGTAGGTaGGTCTATAGAAACTGCACA +
Preference number: 2 (lower is better)
Translates to: AKAADTEQNDFIDIKFQKMQDCR*VYRNCT
Trigger: TGTGCAGTTTCTATAGACTCACCTACAGTCCTGCAT...CTTCTGGAACTTTATATCAATGAAATCATTCTGTTCTGTGTCTGCTGCTTTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR CCA 72 bp CTGCCATGGGAGGAGCCCCAGGTGAGGTTCTGTCAGTaGCACCCCGGGAGACACAAAGGCACCTGGAGGAGG +
Preference number: 3 (lower is better)
Translates to: LPWEEPQVRFCQ*HPGRHKGTWRR
Trigger: CCTCCTCCAGGTGCCTTTGTGTCTCCCGGGGTGCCACTGACAGAACCTCACCTGGGGCTCCTCCCATGGCAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR CCA 72 bp GATGCCTGGTTTCAGCACGACCCGCCTGCCAAGGTCTaGGGTCACAGGAAGTGGGCCTGGCCTGCCCTGATG +
Preference number: 3 (lower is better)
Translates to: DAWFQHDPPAKV*GHRKWAWPALM
Trigger: CATCAGGGCAGGCCAGGCCCACTTCCTGTGACCCCAGACCTTGGCAGGCGGGTCGTGCTGAAACCAGGCATC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR CCA 72 bp GCACTAGCAAAGGCCTGGAGATGGCGGAGCGCAGCGTaGGAGAGATCGAGAGCAGCCCCACCAGAGTGGGAC +
Preference number: 3 (lower is better)
Translates to: ALAKAWRWRSAA*ERSRAAPPEWD
Trigger: GTCCCACTCTGGTGGGGCTGCTCTCGATCTCTCCCACGCTGCGCTCCGCCATCTCCAGGCCTTTGCTAGTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR TCA 72 bp GCACACCACACGTGGGGCTATGAGCTGAGGCCGTCCTaGGAAGCCTGCCCTCCCCTGAGGAGAAACAGCCTG +
Preference number: 3 (lower is better)
Translates to: AHHTWGYELRPS*EACPPLRRNSL
Trigger: CAGGCTGTTTCTCCTCAGGGGAGGGCAGGCTTCTCAGGACGGCCTCAGCTCATAGCCCCACGTGTGGTGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR GCA 72 bp GGCCGGGAAGGGGAATTGGCAAAGAAGGCAACAAACTaGCTCCTGGGTGGCTCTGCCCGGCTCCGCGTTAGC +
Preference number: 3 (lower is better)
Translates to: GREGELAKKATN*LLGGSARLRVS
Trigger: GCTAACGCGGAGCCGGGCAGAGCCACCCAGGAGGCAGTTTGTTGCCTTCTTTGCCAATTCCCCTTCCCGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR CCA 72 bp GCCAAAAAGCCTTGGGGGTGCAGGAGCCTCCATGCCTaGGCCCTGCCCTCACTCAGGCCATTCAGAAGCCAC +
Preference number: 3 (lower is better)
Translates to: AKKPWGCRSLHA*ALPSLRPFRSH
Trigger: GTGGCTTCTGAATGGCCTGAGTGAGGGCAGGGCCCAGGCATGGAGGCTCCTGCACCCCCAAGGCTTTTTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR CCA 72 bp GCAGCGTGGGAGAGATCGAGAGCAGCCCCACCAGAGTaGGACAGTGGATACGGGCCAGAGCAGGTGGGGAAA +
Preference number: 3 (lower is better)
Translates to: AAWERSRAAPPE*DSGYGPEQVGK
Trigger: TTTCCCCACCTGCTCTGGCCCGTATCCACTGTCCCACTCTGGTGGGGCTGCTCTCGATCTCTCCCACGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR TCA 72 bp TGGACCACATGGCACTGCCATGGGAGGAGCCCCAGGTaGGGTTCTGTCAGTGGCACCCCGGGAGACACAAAG +
Preference number: 3 (lower is better)
Translates to: WTTWHCHGRSPR*GSVSGTPGDTK
Trigger: CTTTGTGTCTCCCGGGGTGCCACTGACAGAACCTCACCTGGGGCTCCTCCCATGGCAGTGCCATGTGGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR-3UTR CAA 90 bp CTTTCCCACAGGACCCCAACCGGCCAGCTGCCATTTTCTGGTCATGAAGAGGAACCTGCTTCCTGCCCTTaGCTGTCCCCCGACCCCTCG +
Preference number: 3 (lower is better)
Translates to: LSHRTPTGQLPFSGHEEEPASCP*LSPDPS
Trigger: CGAGGGGTCGGGGGACAGCAAAGGGCAGGAAGCAGG...TTCCTCTTCATGACCAGAAAATGGCAGCTGGCCGGTTGGGGTCCTGTGGGAAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR CCA 72 bp TGCCCTAAACCTTTCCCCAGGTGTGAGGGAGATGCCTaGTTTCAGCACGACCCGCCTGCCAAGGTCTGGGGT +
Preference number: 3 (lower is better)
Translates to: CPKPFPRCEGDA*FQHDPPAKVWG
Trigger: ACCCCAGACCTTGGCAGGCGGGTCGTGCTGAAACCAGGCATCTCCCTCACACCTGGGGAAAGGTTTAGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR TCA 72 bp GGAACCACCGTGGGACTCTGGACTGGCACTGATGGCTaGGAGTGGAGAGAGTTGTGGCATGGCAGAAGGGCA +
Preference number: 3 (lower is better)
Translates to: GTTVGLWTGTDG*EWRELWHGRRA
Trigger: TGCCCTTCTGCCATGCCACAACTCTCTCCACTCTCAGCCATCAGTGCCAGTCCAGAGTCCCACGGTGGTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR CCA 72 bp CTAGCCCTTCCCCACACAGCTAGAGTCCTCGGGCTTTaGGAGCAGCCGGTCTCAATGGGCTTACTGACTCCT +
Preference number: 3 (lower is better)
Translates to: LALPHTARVLGL*EQPVSMGLLTP
Trigger: AGGAGTCAGTAAGCCCATTGAGACCGGCTGCTCCCAAAGCCCGAGGACTCTAGCTGTGTGGGGAAGGGCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR CCA 72 bp GAGAGAGCAGCCAACTCACCCCGATGCCTAACGCATTaGAGGTTCCCAGTCCTTGGAGCTGGAAGGGCCATG +
Preference number: 3 (lower is better)
Translates to: ERAANSPRCLTH*RFPVLGAGRAM
Trigger: CATGGCCCTTCCAGCTCCAAGGACTGGGAACCTCCAATGCGTTAGGCATCGGGGTGAGTTGGCTGCTCTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR-3UTR CAA 90 bp AGACGAGGAGGAGGTAGGAGGGCCAAGAAGGACCAGAGAGTCTCCACCTTGGCTTCAGACCCCATCTCCTaGAGGAGCTCAGGCTCTTGG +
Preference number: 3 (lower is better)
Translates to: RRGGGRRAKKDQRVSTLASDPIS*RSSGSW
Trigger: CCAAGAGCCTGAGCTCCTCAAGGAGATGGGGTCTGA...AGCCAAGGTGGAGACTCTCTGGTCCTTCTTGGCCCTCCTACCTCCTCCTCGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
3UTR-3UTR CAA 90 bp CTGGATGATGACAGTGTTCCACTCTCTCATCCAGGCGTGGTTGCGTGGGCATACGGAGGTTCCCAGTCCTaGGAGCTGGAAGGGCCATGG +
Preference number: 3 (lower is better)
Translates to: LDDDSVPLSHPGVVAWAYGGSQS*ELEGPW
Trigger: CCATGGCCCTTCCAGCTCCAAGGACTGGGAACCTCC...GTATGCCCACGCAACCACGCCTGGATGAGAGAGTGGAACACTGTCATCATCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR-3UTR CAA 90 bp CTGGATGATGACAGTGTTCCACTCTCTCATCCAGGCGTGGTTGCGTGGGCATACTGGCTTACAGCAGCCTaGACCTCCCAGGCTCAGGTG +
Preference number: 3 (lower is better)
Translates to: LDDDSVPLSHPGVVAWAYWLTAA*TSQAQV
Trigger: CACCTGAGCCTGGGAGGTCAAGGCTGCTGTAAGCCA...GTATGCCCACGCAACCACGCCTGGATGAGAGAGTGGAACACTGTCATCATCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR GCA 72 bp CCCCCGGCTTCTCCTGAGAGACACCCCATGATTCTCTaGCCCTGGCTGACACAAGAGAAGACAAAGAGGGCA +
Preference number: 3 (lower is better)
Translates to: PPASPERHPMIL*PWLTQEKTKRA
Trigger: TGCCCTCTTTGTCTTCTCTTGTGTCAGCCAGGGGCAGAGAATCATGGGGTGTCTCTCAGGAGAAGCCGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
3UTR CCA 72 bp GGAAATGGAAACAGGCACAAGGCGCTGGGGACTCCATaGCAAGGAAAACAGAGGGAGCCTCGGGACCACACT +
Preference number: 3 (lower is better)
Translates to: GNGNRHKALGTP*QGKQREPRDHT
Trigger: AGTGTGGTCCCGAGGCTCCCTCTGTTTTCCTTGCCATGGAGTCCCCAGCGCCTTGTGCCTGTTTCCATTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR CCA 72 bp ACCCCGATGCCTAACGCATTGGAGGTTCCCAGTCCTTaGAGCTGGAAGGGCCATGGAGGATGCCTCGTTCAA +
Preference number: 3 (lower is better)
Translates to: TPMPNALEVPSP*SWKGHGGCLVQ
Trigger: TTGAACGAGGCATCCTCCATGGCCCTTCCAGCTCCAAGGACTGGGAACCTCCAATGCGTTAGGCATCGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR CCA 72 bp GTGGTTCAGATGTGGCATTCTGCACTAGCAAAGGCCTaGAGATGGCGGAGCGCAGCGTGGGAGAGATCGAGA +
Preference number: 3 (lower is better)
Translates to: VVQMWHSALAKA*RWRSAAWERSR
Trigger: TCTCGATCTCTCCCACGCTGCGCTCCGCCATCTCCAGGCCTTTGCTAGTGCAGAATGCCACATCTGAACCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR CCA 72 bp AGCTGCACCAGTGTGGAGGGAAGGGTGGTTCAGATGTaGCATTCTGCACTAGCAAAGGCCTGGAGATGGCGG +
Preference number: 3 (lower is better)
Translates to: SCTSVEGRVVQM*HSALAKAWRWR
Trigger: CCGCCATCTCCAGGCCTTTGCTAGTGCAGAATGCCACATCTGAACCACCCTTCCCTCCACACTGGTGCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR TCA 72 bp CAGACAGGACTGTGGGAGGCCAACACAAGCTCCTTATaGACAAAGGAGGTGGGAAGCTGCTGCAGGGACCAC +
Preference number: 3 (lower is better)
Translates to: QTGLWEANTSSL*TKEVGSCCRDH
Trigger: GTGGTCCCTGCAGCAGCTTCCCACCTCCTTTGTTCATAAGGAGCTTGTGTTGGCCTCCCACAGTCCTGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
3UTR GCA 72 bp TGGGGATCTCAGGTTCTAATGCTGGCTCTGGAAAGATaGTCCAGGGAGGCGACTGCCAAGTCCCAGAACCAG +
Preference number: 3 (lower is better)
Translates to: WGSQVLMLALER*SREATAKSQNQ
Trigger: CTGGTTCTGGGACTTGGCAGTCGCCTCCCTGGAGCATCTTTCCAGAGCCAGCATTAGAACCTGAGATCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR CCA 72 bp GCCATACCGCGTCTTCCAGCTAGCCAGGCTCTAGGATaGGCCCATCATGACTATCCTGCAGTCTTCAGACCT +
Preference number: 3 (lower is better)
Translates to: AIPRLPASQALG*AHHDYPAVFRP
Trigger: AGGTCTGAAGACTGCAGGATAGTCATGATGGGCCCATCCTAGAGCCTGGCTAGCTGGAAGACGCGGTATGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR CCA 72 bp ACAACTCTGCCTCCACGCGCCAGAAATCAACAGTCATaGGGGGAGAGCTTGGAAGGGGAAGGTGACTGGCTT +
Preference number: 3 (lower is better)
Translates to: TTLPPRARNQQS*GESLEGEGDWL
Trigger: AAGCCAGTCACCTTCCCCTTCCAAGCTCTCCCCCCATGACTGTTGATTTCTGGCGCGTGGAGGCAGAGTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR CCA 72 bp CTCCATGTCTATATCAGCCCTAATGGGCAGAGAGGCTaGGGAATGCCAGCCTGTCCATGCCTGAGGACCATG +
Preference number: 3 (lower is better)
Translates to: LHVYISPNGQRG*GMPACPCLRTM
Trigger: CATGGTCCTCAGGCATGGACAGGCTGGCATTCCCCAGCCTCTCTGCCCATTAGGGCTGATATAGACATGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR CCA 72 bp GAACAGACAGTTCACAGGCGCTCAGCTGCACCAGTGTaGAGGGAAGGGTGGTTCAGATGTGGCATTCTGCAC +
Preference number: 3 (lower is better)
Translates to: EQTVHRRSAAPV*REGWFRCGILH
Trigger: GTGCAGAATGCCACATCTGAACCACCCTTCCCTCCACACTGGTGCAGCTGAGCGCCTGTGAACTGTCTGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR-3UTR CAA 90 bp GAACCCAACTCTGAAAAACGTCCAGCAGACAGGACTGTGGGAGGCCAACACAAGTCAGACCCCATCTCCTaGAGGAGCTCAGGCTCTTGG +
Preference number: 3 (lower is better)
Translates to: EPNSEKRPADRTVGGQHKSDPIS*RSSGSW
Trigger: CCAAGAGCCTGAGCTCCTCAAGGAGATGGGGTCTGA...CTTGTGTTGGCCTCCCACAGTCCTGTCTGCTGGACGTTTTTCAGAGTTGGGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
3UTR CCA 72 bp GCTTCTCCTGAGAGACACCCCATGATTCTCTGCCCCTaGCTGACACAAGAGAAGACAAAGAGGGCACAGGTG +
Preference number: 3 (lower is better)
Translates to: ASPERHPMILCP*LTQEKTKRAQV
Trigger: CACCTGTGCCCTCTTTGTCTTCTCTTGTGTCAGCCAGGGGCAGAGAATCATGGGGTGTCTCTCAGGAGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
3UTR CCA 72 bp GTGGATACGGGCCAGAGCAGGTGGGGAAAAATGAAATaGCAGAGCCCAGACTATGCATGGCTGGGAATGCCA +
Preference number: 3 (lower is better)
Translates to: VDTGQSRWGKMK*QSPDYAWLGMP
Trigger: TGGCATTCCCAGCCATGCATAGTCTGGGCTCTGCCATTTCATTTTTCCCCACCTGCTCTGGCCCGTATCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR CCA 72 bp CACCAGAGTGGGACAGTGGATACGGGCCAGAGCAGGTaGGGAAAAATGAAATGGCAGAGCCCAGACTATGCA +
Preference number: 3 (lower is better)
Translates to: HQSGTVDTGQSR*GKMKWQSPDYA
Trigger: TGCATAGTCTGGGCTCTGCCATTTCATTTTTCCCCACCTGCTCTGGCCCGTATCCACTGTCCCACTCTGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR CCA 72 bp TGTGTGGTGGCAACAGTCAAAGAAAATGCCGCTCTCTaGGCAAGAGAGAAGGGATGCTCCCTGGGCAAGAGC +
Preference number: 3 (lower is better)
Translates to: CVVATVKENAAL*AREKGCSLGKS
Trigger: GCTCTTGCCCAGGGAGCATCCCTTCTCTCTTGCCCAGAGAGCGGCATTTTCTTTGACTGTTGCCACCACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR-3UTR CAA 90 bp CAAGGCGCTGGGGACTCCATGGCAAGGAAAACAGAGGGAGCCTCGGGACCACACAAAAGAAGCACATTTTaGCTAAGCGGCAGTGATGGA +
Preference number: 3 (lower is better)
Translates to: QGAGDSMARKTEGASGPHKRSTF*LSGSDG
Trigger: TCCATCACTGCCGCTTAGCAAAAATGTGCTTCTTTT...GTGTGGTCCCGAGGCTCCCTCTGTTTTCCTTGCCATGGAGTCCCCAGCGCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR TCA 72 bp ACACAAGAGAAGACAAAGAGGGCACAGGTGAGATGCTaGTTGGTGAGACCTCCCTCAGGGAAGACGAGGAGG +
Preference number: 3 (lower is better)
Translates to: TQEKTKRAQVRC*LVRPPSGKTRR
Trigger: CCTCCTCGTCTTCCCTGAGGGAGGTCTCACCAATCAGCATCTCACCTGTGCCCTCTTTGTCTTCTCTTGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
3UTR TCA 72 bp TCGGGCTTTGGGAGCAGCCGGTCTCAATGGGCTTACTaGCTCCTCTTCGCTCAAAATCACATCAGAGAAGGG +
Preference number: 3 (lower is better)
Translates to: SGFGSSRSQWAY*LLFAQNHIREG
Trigger: CCCTTCTCTGATGTGATTTTGAGCGAAGAGGAGTCAGTAAGCCCATTGAGACCGGCTGCTCCCAAAGCCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR TCA 72 bp TACATTCCTGCCTACTCAGTGCTGTCAGCAGAGTCCTaGCCAATGCTAGCCCTTCCCCACACAGCTAGAGTC +
Preference number: 3 (lower is better)
Translates to: YIPAYSVLSAES*PMLALPHTARV
Trigger: GACTCTAGCTGTGTGGGGAAGGGCTAGCATTGGTCAGGACTCTGCTGACAGCACTGAGTAGGCAGGAATGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR GCA 72 bp TCCACTGTCAGCACCGAGCAACATTGGATATTCACCTaGAGGGTGCTAGGGAACTGTGTGGTGGCAACAGTC +
Preference number: 3 (lower is better)
Translates to: STVSTEQHWIFT*RVLGNCVVATV
Trigger: GACTGTTGCCACCACACAGTTCCCTAGCACCCTGCAGGTGAATATCCAATGTTGCTCGGTGCTGACAGTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR CCA 72 bp ACTTCACTCCTCAATTCCCGAGGGTCTCTTACCTCTTaGGAAGGGAGAATCGCCACTATGGGGAGAGAGCAG +
Preference number: 3 (lower is better)
Translates to: TSLLNSRGSLTS*EGRIATMGREQ
Trigger: CTGCTCTCTCCCCATAGTGGCGATTCTCCCTTCCCAAGAGGTAAGAGACCCTCGGGAATTGAGGAGTGAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR CCA 72 bp ATGCCGCTCTCTGGGCAAGAGAGAAGGGATGCTCCCTaGGCAAGAGCAGGGAGAGAGAAGTTTATGAGGAAA +
Preference number: 3 (lower is better)
Translates to: MPLSGQERRDAP*ARAGREKFMRK
Trigger: TTTCCTCATAAACTTCTCTCTCCCTGCTCTTGCCCAGGGAGCATCCCTTCTCTCTTGCCCAGAGAGCGGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR-3UTR CAA 90 bp CTCAACCCAGAAGCTCCAGGAACACCTTGGGACCCTCAGAAGAAAGACATCAAATCAGACCCCATCTCCTaGAGGAGCTCAGGCTCTTGG +
Preference number: 3 (lower is better)
Translates to: LNPEAPGTPWDPQKKDIKSDPIS*RSSGSW
Trigger: CCAAGAGCCTGAGCTCCTCAAGGAGATGGGGTCTGA...TTTGATGTCTTTCTTCTGAGGGTCCCAAGGTGTTCCTGGAGCTTCTGGGTTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
3UTR-3UTR CAA 90 bp CTGGGCAAGAGCAGGGAGAGAGAAGTTTATGAGGAAACTGAACAGGGGCCGGGCTGGGGTCTCCTTATATaGCCCCAGATCATCTCAAAC +
Preference number: 3 (lower is better)
Translates to: LGKSREREVYEETEQGPGWGLLI*PQIISN
Trigger: GTTTGAGATGATCTGGGGCAATATAAGGAGACCCCA...GCCCGGCCCCTGTTCAGTTTCCTCATAAACTTCTCTCTCCCTGCTCTTGCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR GCA 72 bp TCTTGGGGACCCTGTAGTTCCCCTCCAAGATTATCTTaGTCTGCCTTTCCTCAACCCAGAAGCTCCAGGAAC +
Preference number: 3 (lower is better)
Translates to: SWGPCSSPPRLS*SAFPQPRSSRN
Trigger: GTTCCTGGAGCTTCTGGGTTGAGGAAAGGCAGAGCAAGATAATCTTGGAGGGGAACTACAGGGTCCCCAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
3UTR GCA 72 bp GTTCCCAGTCCTTGGAGCTGGAAGGGCCATGGAGGATaGCTCGTTCAACCTCATTTTACTTGTCCAATTAGC +
Preference number: 3 (lower is better)
Translates to: VPSPWSWKGHGG*LVQPHFTCPIS
Trigger: GCTAATTGGACAAGTAAAATGAGGTTGAACGAGGCATCCTCCATGGCCCTTCCAGCTCCAAGGACTGGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR CCA 72 bp GGAGCCTTTTCCATAGGAGGTGATGTGGGCAAATCTTaGGGACCCTGTAGTTCCCCTCCAAGATTATCTTGC +
Preference number: 3 (lower is better)
Translates to: GAFSIGGDVGKS*GPCSSPPRLSC
Trigger: GCAAGATAATCTTGGAGGGGAACTACAGGGTCCCCAAGATTTGCCCACATCACCTCCTATGGAAAAGGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
3UTR CCA 72 bp TGGGTCTCTCATCCAAGCTGGGTGCAGGATAAAACCTaGGAGGAGCTAGTGAGGAAAGAACATGTTTGTGGC +
Preference number: 3 (lower is better)
Translates to: WVSHPSWVQDKT*EELVRKEHVCG
Trigger: GCCACAAACATGTTCTTTCCTCACTAGCTCCTCCCAGGTTTTATCCTGCACCCAGCTTGGATGAGAGACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR CCA 72 bp TCCATCCATTCATCCACTGTCAGCACCGAGCAACATTaGATATTCACCTGCAGGGTGCTAGGGAACTGTGTG +
Preference number: 3 (lower is better)
Translates to: SIHSSTVSTEQH*IFTCRVLGNCV
Trigger: CACACAGTTCCCTAGCACCCTGCAGGTGAATATCCAATGTTGCTCGGTGCTGACAGTGGATGAATGGATGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR-3UTR CAA 90 bp TCTAGAACACCCAGGGCAAAGGGCGGCACATCTATGACACTTGTGCTTCTTCAATGGCTTCTGATATCCTaGAGCCCCAAAACACCACTC +
Preference number: 3 (lower is better)
Translates to: SRTPRAKGGTSMTLVLLQWLLIS*SPKTPL
Trigger: GAGTGGTGTTTTGGGGCTCAAGGATATCAGAAGCCA...TTGAAGAAGCACAAGTGTCATAGATGTGCCGCCCTTTGCCCTGGGTGTTCTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR-3UTR CAA 90 bp TCTAGAACACCCAGGGCAAAGGGCGGCACATCTATGACACTTGTGCTTCTTCAAAAGGAAAGGGCAATTTaGGACCACATGGCACTGCCA +
Preference number: 3 (lower is better)
Translates to: SRTPRAKGGTSMTLVLLQKERAI*DHMALP
Trigger: TGGCAGTGCCATGTGGTCCAAAATTGCCCTTTCCTT...TTGAAGAAGCACAAGTGTCATAGATGTGCCGCCCTTTGCCCTGGGTGTTCTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR TCA 72 bp CCTCCTTTGGAAAGCAGACTCCAGGGAGAGAACGTCTaGCACTCACATCTTACTGTAGGTTATGTTGGCTCG +
Preference number: 3 (lower is better)
Translates to: PPLESRLQGENV*HSHLTVGYVGS
Trigger: CGAGCCAACATAACCTACAGTAAGATGTGAGTGTCAGACGTTCTCTCCCTGGAGTCTGCTTTCCAAAGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR TCA 72 bp GATCTAGAACACCCAGGGCAAAGGGCGGCACATCTATaGCACTTGTGCTTCTTCAAGTACTTCAGTGAGTCC +
Preference number: 3 (lower is better)
Translates to: DLEHPGQRAAHL*HLCFFKYFSES
Trigger: GGACTCACTGAAGTACTTGAAGAAGCACAAGTGTCATAGATGTGCCGCCCTTTGCCCTGGGTGTTCTAGATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR TCA 72 bp AGTCTGATTCTTAGTCCAGCTGAAACGTGTTCTGTGTaGTCTAGAACACCCAGGGCAAAGGGCGGCACATCT +
Preference number: 3 (lower is better)
Translates to: SLILSPAETCSV*SRTPRAKGGTS
Trigger: AGATGTGCCGCCCTTTGCCCTGGGTGTTCTAGATCACACAGAACACGTTTCAGCTGGACTAAGAATCAGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR GCA 72 bp TACAAGTGTGGAATTACTCGAGAAACTTGCTTTCCATaGAGCCTTAAGCCCACTATGCAGGCAGGGGAGCCT +
Preference number: 3 (lower is better)
Translates to: YKCGITRETCFP*SLKPTMQAGEP
Trigger: AGGCTCCCCTGCCTGCATAGTGGGCTTAAGGCTGCATGGAAAGCAAGTTTCTCGAGTAATTCCACACTTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR CCA 72 bp CCTTTGGATCAAGAAATCTACTCACCCTGCCTCCTTTaGAAAGCAGACTCCAGGGAGAGAACGTCTGACACT +
Preference number: 3 (lower is better)
Translates to: PLDQEIYSPCLL*KADSRERTSDT
Trigger: AGTGTCAGACGTTCTCTCCCTGGAGTCTGCTTTCCAAAGGAGGCAGGGTGAGTAGATTTCTTGATCCAAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR CCA 72 bp CGGGGAACCCTAATGTTAAGTAGGCACAAGAAACAGTaGGTCTCTCATCCAAGCTGGGTGCAGGATAAAACC +
Preference number: 3 (lower is better)
Translates to: RGTLMLSRHKKQ*VSHPSWVQDKT
Trigger: GGTTTTATCCTGCACCCAGCTTGGATGAGAGACCCACTGTTTCTTGTGCCTACTTAACATTAGGGTTCCCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR CCA 72 bp TCACACTCACCTTCACCTTTCCGATTCTGGCCTATTTaGCCAGAATCCAGGTTCTACTCCATGTCAGCAGAC +
Preference number: 3 (lower is better)
Translates to: SHSPSPFRFWPI*PESRFYSMSAD
Trigger: GTCTGCTGACATGGAGTAGAACCTGGATTCTGGCCAAATAGGCCAGAATCGGAAAGGTGAAGGTGAGTGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR-3UTR CAA 90 bp AGAGGAATTGGGAAAAATAGACTCACTTCTGCAGGGCACTCTCTGTCACCAGGTCCCTCCAAGATTATCTaGCTCTGCCTTTCCTCAACC +
Preference number: 3 (lower is better)
Translates to: RGIGKNRLTSAGHSLSPGPSKII*LCLSST
Trigger: GGTTGAGGAAAGGCAGAGCAAGATAATCTTGGAGGG...ACCTGGTGACAGAGAGTGCCCTGCAGAAGTGAGTCTATTTTTCCCAATTCCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR-3UTR CAA 90 bp CATTTTACTTGTCCAATTAGCCCAAGTCAGAGCTTCCTTCCGTGGGAAGGTTCTCATCTGGGGAAAGGCTaGATGTCAAAGCTGTCCTCC +
Preference number: 3 (lower is better)
Translates to: HFTCPISPSQSFLPWEGSHLGKG*MSKLSS
Trigger: GGAGGACAGCTTTGACATCAAGCCTTTCCCCAGATG...AGAACCTTCCCACGGAAGGAAGCTCTGACTTGGGCTAATTGGACAAGTAAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR TCA 72 bp ATGCAAGAGAGAGCTATGCTCGGCTTTAACTCGCTCTaGGGACTTATCCTCTGTACGTCCATCCATTCATCC +
Preference number: 3 (lower is better)
Translates to: MQERAMLGFNSL*GLILCTSIHSS
Trigger: GGATGAATGGATGGACGTACAGAGGATAAGTCCTCAGAGCGAGTTAAAGCCGAGCATAGCTCTCTCTTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR GCA 72 bp AAACGGATTCCTTTGGATCAAGAAATCTACTCACCCTaGCTCCTTTGGAAAGCAGACTCCAGGGAGAGAACG +
Preference number: 3 (lower is better)
Translates to: KRIPLDQEIYSP*LLWKADSRERT
Trigger: CGTTCTCTCCCTGGAGTCTGCTTTCCAAAGGAGGCAGGGTGAGTAGATTTCTTGATCCAAAGGAATCCGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR CCA 72 bp GACCGGTGGAGAGGAAACAGCAGAATCTATGCAGAATaGGAACCTGCACCTTTTCTGTCTCTCTATTCACAG +
Preference number: 3 (lower is better)
Translates to: DRWRGNSRIYAE*EPAPFLSLYSQ
Trigger: CTGTGAATAGAGAGACAGAAAAGGTGCAGGTTCCCATTCTGCATAGATTCTGCTGTTTCCTCTCCACCGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR CCA 72 bp CACAGACACATTACGAGATATGGGCTACAGCATTTGTaGATTCACAACTCTGCCTCCACGCGCCAGAAATCA +
Preference number: 3 (lower is better)
Translates to: HRHITRYGLQHL*IHNSASTRQKS
Trigger: TGATTTCTGGCGCGTGGAGGCAGAGTTGTGAATCCACAAATGCTGTAGCCCATATCTCGTAATGTGTCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR CCA 72 bp GACAGTGTTCCACTCTCTCATCCAGGCGTGGTTGCGTaGGCATACACACTTTATGAAAATTCACTGAGTCGT +
Preference number: 3 (lower is better)
Translates to: DSVPLSHPGVVA*AYTLYENSLSR
Trigger: ACGACTCAGTGAATTTTCATAAAGTGTGTATGCCCACGCAACCACGCCTGGATGAGAGAGTGGAACACTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR-3UTR CAA 90 bp CTTTCCCACAGGACCCCAACCGGCCAGCTGCCATTTTCTGGTCATGAAGAGGAAGAGGAAAGAACATGTTaGTGGCTCAAGATTTCAATT +
Preference number: 3 (lower is better)
Translates to: LSHRTPTGQLPFSGHEEEEERTC*WLKISI
Trigger: AATTGAAATCTTGAGCCACAAACATGTTCTTTCCTC...TTCCTCTTCATGACCAGAAAATGGCAGCTGGCCGGTTGGGGTCCTGTGGGAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR TCA 72 bp GTAGGTTATGTTGGCTCGGAGGAGTTATGGGAAATGTaGCTAACGGAGAAGGAAAGGGCAATTTTGGACCAC +
Preference number: 3 (lower is better)
Translates to: VGYVGSEELWEM*LTEKERAILDH
Trigger: GTGGTCCAAAATTGCCCTTTCCTTCTCCGTTAGTCACATTTCCCATAACTCCTCCGAGCCAACATAACCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR TCA 72 bp TATACTACACACACATGCACACACACAGCCAGGTCGTaGGGCTCTAAGTGGACACAGACACATTACGAGATA +
Preference number: 3 (lower is better)
Translates to: YTTHTCTHTARS*GSKWTQTHYEI
Trigger: TATCTCGTAATGTGTCTGTGTCCACTTAGAGCCTCACGACCTGGCTGTGTGTGTGCATGTGTGTGTAGTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR TCA 72 bp GAGGACCCTAACAATTTTTCCGAAGGGAAGTATCTATaGCGCATACGTGGGGAGAGTCAGTACAAGTGTGGA +
Preference number: 3 (lower is better)
Translates to: EDPNNFSEGKYL*RIRGESQYKCG
Trigger: TCCACACTTGTACTGACTCTCCCCACGTATGCGTCATAGATACTTCCCTTCGGAAAAATTGTTAGGGTCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR GCA 72 bp GAGAGGAAACAGCAGAATCTATGCAGAATGGGAACCTaGACCTTTTCTGTCTCTCTATTCACAGGATGGGGA +
Preference number: 3 (lower is better)
Translates to: ERKQQNLCRMGT*TFSVSLFTGWG
Trigger: TCCCCATCCTGTGAATAGAGAGACAGAAAAGGTGCAGGTTCCCATTCTGCATAGATTCTGCTGTTTCCTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR GCA 72 bp GAGAGTCAGTACAAGTGTGGAATTACTCGAGAAACTTaGTTTCCATGCAGCCTTAAGCCCACTATGCAGGCA +
Preference number: 3 (lower is better)
Translates to: ESQYKCGITRET*FPCSLKPTMQA
Trigger: TGCCTGCATAGTGGGCTTAAGGCTGCATGGAAAGCAAGTTTCTCGAGTAATTCCACACTTGTACTGACTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR CCA 72 bp TACCTACTATCACACTCACCTTCACCTTTCCGATTCTaGCCTATTTGGCCAGAATCCAGGTTCTACTCCATG +
Preference number: 3 (lower is better)
Translates to: YLLSHSPSPFRF*PIWPESRFYSM
Trigger: CATGGAGTAGAACCTGGATTCTGGCCAAATAGGCCAGAATCGGAAAGGTGAAGGTGAGTGTGATAGTAGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR CCA 72 bp TCTATGACGCATACGTGGGGAGAGTCAGTACAAGTGTaGAATTACTCGAGAAACTTGCTTTCCATGCAGCCT +
Preference number: 3 (lower is better)
Translates to: SMTHTWGESVQV*NYSRNLLSMQP
Trigger: AGGCTGCATGGAAAGCAAGTTTCTCGAGTAATTCCACACTTGTACTGACTCTCCCCACGTATGCGTCATAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR CCA 72 bp TGGATGATGACAGTGTTCCACTCTCTCATCCAGGCGTaGTTGCGTGGGCATACACACTTTATGAAAATTCAC +
Preference number: 3 (lower is better)
Translates to: WMMTVFHSLIQA*LRGHTHFMKIH
Trigger: GTGAATTTTCATAAAGTGTGTATGCCCACGCAACCACGCCTGGATGAGAGAGTGGAACACTGTCATCATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR TCA 72 bp ACATCTATGACACTTGTGCTTCTTCAAGTACTTCAGTaGGTCCAGGCCTCCTCTTTTCCTGCTCATCCATTG +
Preference number: 3 (lower is better)
Translates to: TSMTLVLLQVLQ*VQASSFPAHPL
Trigger: CAATGGATGAGCAGGAAAAGAGGAGGCCTGGACTCACTGAAGTACTTGAAGAAGCACAAGTGTCATAGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR CCA 72 bp GAACGTCTGACACTCACATCTTACTGTAGGTTATGTTaGCTCGGAGGAGTTATGGGAAATGTGACTAACGGA +
Preference number: 3 (lower is better)
Translates to: ERLTLTSYCRLC*LGGVMGNVTNG
Trigger: TCCGTTAGTCACATTTCCCATAACTCCTCCGAGCCAACATAACCTACAGTAAGATGTGAGTGTCAGACGTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR GCA 72 bp TTTGCTAGCATAGGAATTACATGCAAGAGAGAGCTATaGTCGGCTTTAACTCGCTCTGAGGACTTATCCTCT +
Preference number: 3 (lower is better)
Translates to: FASIGITCKREL*SALTRSEDLSS
Trigger: AGAGGATAAGTCCTCAGAGCGAGTTAAAGCCGAGCATAGCTCTCTCTTGCATGTAATTCCTATGCTAGCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR CCA 72 bp CAATTTTTCCGAAGGGAAGTATCTATGACGCATACGTaGGGAGAGTCAGTACAAGTGTGGAATTACTCGAGA +
Preference number: 3 (lower is better)
Translates to: QFFRREVSMTHT*GESVQVWNYSR
Trigger: TCTCGAGTAATTCCACACTTGTACTGACTCTCCCCACGTATGCGTCATAGATACTTCCCTTCGGAAAAATTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR TCA 72 bp GGTGACAACATTAACATTTATTTGAAAAGGGCATCGTaGTGGCTCACTGGGAGATCGCGACTAATAGTCCTA +
Preference number: 3 (lower is better)
Translates to: GDNINIYLKRAS*WLTGRSRLIVL
Trigger: TAGGACTATTAGTCGCGATCTCCCAGTGAGCCATCACGATGCCCTTTTCAAATAAATGTTAATGTTGTCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR GCA 72 bp CAAATTAACAGTACTTCCAAATCTCAAATACATTCCTaGCTACTCAGTGCTGTCAGCAGAGTCCTGACCAAT +
Preference number: 3 (lower is better)
Translates to: QINSTSKSQIHS*LLSAVSRVLTN
Trigger: ATTGGTCAGGACTCTGCTGACAGCACTGAGTAGGCAGGAATGTATTTGAGATTTGGAAGTACTGTTAATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR TCA 90 bp GAGGAGGAGGTAGGAGGGCCAAGAAGGACCAGAGAGTCTCCACCTTGGCTTAGCGCCCGCTGGGCCTGCTaGTGCCACAGGCCCACCTCC +
Preference number: 4 (lower is better)
Translates to: EEEVGGPRRTRESPPWLSARWAC*CHRPTS
Trigger: GGAGGTGGGCCTGTGGCATCAGCAGGCCCAGCGGGC...GCTAAGCCAAGGTGGAGACTCTCTGGTCCTTCTTGGCCCTCCTACCTCCTCCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR TCA 90 bp GGGCTTGGAAGGGCAGGACTCACTGATGCTAGACCAAGGGCCAGGGTACCTCCCAGGTGCTTGGAGGGGTaGGGGAGACCGGCTCTCTGC +
Preference number: 4 (lower is better)
Translates to: GLGRAGLTDARPRARVPPRCLEG*GRPALC
Trigger: GCAGAGAGCCGGTCTCCCTCACCCCTCCAAGCACCT...GGGAGGTACCCTGGCCCTTGGTCTAGCATCAGTGAGTCCTGCCCTTCCAAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR TCA 90 bp CAAGGCGCTGGGGACTCCATGGCAAGGAAAACAGAGGGAGCCTCGGGACCACACGCGCGTAGTCGATGCTaGGCCGCAGCTGCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: QGAGDSMARKTEGASGPHARSRC*AAAASA
Trigger: TGCTGAGGCAGCTGCGGCTCAGCATCGACTACGCGC...GTGTGGTCCCGAGGCTCCCTCTGTTTTCCTTGCCATGGAGTCCCCAGCGCCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR TCA 90 bp CTTGCTCTGCCTTTCCTCAACCCAGAAGCTCCAGGAACACCTTGGGACCCTCAGGCCCGCTGGGCCTGCTaGTGCCACAGGCCCACCTCC +
Preference number: 4 (lower is better)
Translates to: LALPFLNPEAPGTPWDPQARWAC*CHRPTS
Trigger: GGAGGTGGGCCTGTGGCATCAGCAGGCCCAGCGGGC...CTGAGGGTCCCAAGGTGTTCCTGGAGCTTCTGGGTTGAGGAAAGGCAGAGCAAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR GCA 90 bp CACAGGCGCTCAGCTGCACCAGTGTGGAGGGAAGGGTGGTTCAGATGTGGCATTGTGTCCACCGCCTGGTaGAGGGATGGCCGCGGGACC +
Preference number: 4 (lower is better)
Translates to: HRRSAAPVWREGWFRCGIVSTAW*RDGRGT
Trigger: GGTCCCGCGGCCATCCCTGCACCAGGCGGTGGACAC...AATGCCACATCTGAACCACCCTTCCCTCCACACTGGTGCAGCTGAGCGCCTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR GCA 90 bp GAGGAGGAGGTAGGAGGGCCAAGAAGGACCAGAGAGTCTCCACCTTGGCTTAGCGTGTCCACCGCCTGGTaGAGGGATGGCCGCGGGACC +
Preference number: 4 (lower is better)
Translates to: EEEVGGPRRTRESPPWLSVSTAW*RDGRGT
Trigger: GGTCCCGCGGCCATCCCTGCACCAGGCGGTGGACAC...GCTAAGCCAAGGTGGAGACTCTCTGGTCCTTCTTGGCCCTCCTACCTCCTCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR GCA 90 bp GAGGAGGAGGTAGGAGGGCCAAGAAGGACCAGAGAGTCTCCACCTTGGCTTAGCGCTCTGGAGCAGCGATaGCCGGGCCCCGCAGTGTGC +
Preference number: 4 (lower is better)
Translates to: EEEVGGPRRTRESPPWLSALEQR*PGPAVC
Trigger: GCACACTGCGGGGCCCGGGCATCGCTGCTCCAGAGC...GCTAAGCCAAGGTGGAGACTCTCTGGTCCTTCTTGGCCCTCCTACCTCCTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR TCA 90 bp GAGGAGGAGGTAGGAGGGCCAAGAAGGACCAGAGAGTCTCCACCTTGGCTTAGCTCTTGGTGCCGAGGCTaGCCGCCCCGTCGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: EEEVGGPRRTRESPPWLSSWCRG*PPRRSS
Trigger: GGAGCTACGACGGGGCGGTCAGCCTCGGCACCAAGA...GCTAAGCCAAGGTGGAGACTCTCTGGTCCTTCTTGGCCCTCCTACCTCCTCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR GCA 90 bp CACAGGCGCTCAGCTGCACCAGTGTGGAGGGAAGGGTGGTTCAGATGTGGCATTGCACCGTCGCAGCGCTaGGGCTGTTGGCGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: HRRSAAPVWREGWFRCGIAPSQR*GCWRPG
Trigger: ACCTGGACGCCAACAGCCGCAGCGCTGCGACGGTGC...AATGCCACATCTGAACCACCCTTCCCTCCACACTGGTGCAGCTGAGCGCCTGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CCA 90 bp AGACGAGGAGGAGGTAGGAGGGCCAAGAAGGACCAGAGAGTCTCCACCTTGGCTCAGCGCTGCGGCTGTTaGCGTCCAGGTGGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: RRGGGRRAKKDQRVSTLAQRCGC*RPGGPG
Trigger: TCCTGGGCCACCTGGACGCCAACAGCCGCAGCGCTG...AGCCAAGGTGGAGACTCTCTGGTCCTTCTTGGCCCTCCTACCTCCTCCTCGTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR CCA 90 bp GGCCGGGCGCTGGAGAACAGACAGTTCACAGGCGCTCAGCTGCACCAGTGTGGAACAGGGGCCGGGCGCTaGAGAACAGACAGTTCACAG +
Preference number: 4 (lower is better)
Translates to: GRALENRQFTGAQLHQCGTGAGR*RTDSSQ
Trigger: CTGTGAACTGTCTGTTCTCCAGCGCCCGGCCCCTGT...TCCACACTGGTGCAGCTGAGCGCCTGTGAACTGTCTGTTCTCCAGCGCCCGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR TCA 90 bp CACAGGCGCTCAGCTGCACCAGTGTGGAGGGAAGGGTGGTTCAGATGTGGCATTAGCCGGTGGCAGCGATaGCCGCGGCTTCCGACAAGA +
Preference number: 4 (lower is better)
Translates to: HRRSAAPVWREGWFRCGISRWQR*PRLPTR
Trigger: TCTTGTCGGAAGCCGCGGTCATCGCTGCCACCGGCT...AATGCCACATCTGAACCACCCTTCCCTCCACACTGGTGCAGCTGAGCGCCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR TCA 90 bp GAGGAGGAGGTAGGAGGGCCAAGAAGGACCAGAGAGTCTCCACCTTGGCTTAGCGCGCGTAGTCGATGCTaGGCCGCAGCTGCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: EEEVGGPRRTRESPPWLSARSRC*AAAASA
Trigger: TGCTGAGGCAGCTGCGGCTCAGCATCGACTACGCGC...GCTAAGCCAAGGTGGAGACTCTCTGGTCCTTCTTGGCCCTCCTACCTCCTCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR TCA 90 bp GGGCTTGGAAGGGCAGGACTCACTGATGCTAGACCAAGGGCCAGGGTACCTCCCGACCCACGTCACGGATaGGCCTCTCAGAGAGGTAGG +
Preference number: 4 (lower is better)
Translates to: GLGRAGLTDARPRARVPPDPRHG*ASQRGR
Trigger: CCTACCTCTCTGAGAGGCTCATCCGTGACGTGGGTC...GGGAGGTACCCTGGCCCTTGGTCTAGCATCAGTGAGTCCTGCCCTTCCAAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR TCA 90 bp CTTGCTCTGCCTTTCCTCAACCCAGAAGCTCCAGGAACACCTTGGGACCCTCAGTGGTCGGGGTGGGCGTaGGGTGAGCCCCTCCTCAGA +
Preference number: 4 (lower is better)
Translates to: LALPFLNPEAPGTPWDPQWSGWA*GEPLLR
Trigger: TCTGAGGAGGGGCTCACCTCACGCCCACCCCGACCA...CTGAGGGTCCCAAGGTGTTCCTGGAGCTTCTGGGTTGAGGAAAGGCAGAGCAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR GCA 90 bp GTCAGGCTGGGAGCCTTTTCCATAGGAGGTGATGTGGGCAAATCTTGGGGACCCGCACCGTCGCAGCGCTaGGGCTGTTGGCGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: VRLGAFSIGGDVGKSWGPAPSQR*GCWRPG
Trigger: ACCTGGACGCCAACAGCCGCAGCGCTGCGACGGTGC...GGGTCCCCAAGATTTGCCCACATCACCTCCTATGGAAAAGGCTCCCAGCCTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR GCA 90 bp CCATCCAGCTCCGTCCTCTGGGGAGGACATGCCCTTCACTCAAAACACCAAGTAGTGTCCACCGCCTGGTaGAGGGATGGCCGCGGGACC +
Preference number: 4 (lower is better)
Translates to: PSSSVLWGGHALHSKHQVVSTAW*RDGRGT
Trigger: GGTCCCGCGGCCATCCCTGCACCAGGCGGTGGACAC...TACTTGGTGTTTTGAGTGAAGGGCATGTCCTCCCCAGAGGACGGAGCTGGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR GCA 90 bp ACAGGTGAGATGCTGATTGGTGAGACCTCCCTCAGGGAAGACGAGGAGGAGGTAGTGTCCACCGCCTGGTaGAGGGATGGCCGCGGGACC +
Preference number: 4 (lower is better)
Translates to: TGEMLIGETSLREDEEEVVSTAW*RDGRGT
Trigger: GGTCCCGCGGCCATCCCTGCACCAGGCGGTGGACAC...TACCTCCTCCTCGTCTTCCCTGAGGGAGGTCTCACCAATCAGCATCTCACCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR GCA 90 bp AGACGAGGAGGAGGTAGGAGGGCCAAGAAGGACCAGAGAGTCTCCACCTTGGCTCGCCGCTCACGCTCCTaGTCCTCCACTGCTACGCTG +
Preference number: 4 (lower is better)
Translates to: RRGGGRRAKKDQRVSTLARRSRS*SSTATL
Trigger: CAGCGTAGCAGTGGAGGAGCAGGAGCGTGAGCGGCG...AGCCAAGGTGGAGACTCTCTGGTCCTTCTTGGCCCTCCTACCTCCTCCTCGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR GCA 90 bp GAGGAGGAGGTAGGAGGGCCAAGAAGGACCAGAGAGTCTCCACCTTGGCTTAGCAACTTCTCCACCACCTaGCGCCGCCGCTCACGCTCC +
Preference number: 4 (lower is better)
Translates to: EEEVGGPRRTRESPPWLSNFSTT*RRRSRS
Trigger: GGAGCGTGAGCGGCGGCGGCAGGTGGTGGAGAAGTT...GCTAAGCCAAGGTGGAGACTCTCTGGTCCTTCTTGGCCCTCCTACCTCCTCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR GCA 90 bp GAGGAGGAGGTAGGAGGGCCAAGAAGGACCAGAGAGTCTCCACCTTGGCTTAGCCCGGGCCCCGCAGTGTaGAGCAATCTCCTCGAAGGG +
Preference number: 4 (lower is better)
Translates to: EEEVGGPRRTRESPPWLSPGPAV*SNLLEG
Trigger: CCCTTCGAGGAGATTGCTGCACACTGCGGGGCCCGG...GCTAAGCCAAGGTGGAGACTCTCTGGTCCTTCTTGGCCCTCCTACCTCCTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR GCA 90 bp CCATCCAGCTCCGTCCTCTGGGGAGGACATGCCCTTCACTCAAAACACCAAGTAGCTCTGGAGCAGCGATaGCCGGGCCCCGCAGTGTGC +
Preference number: 4 (lower is better)
Translates to: PSSSVLWGGHALHSKHQVALEQR*PGPAVC
Trigger: GCACACTGCGGGGCCCGGGCATCGCTGCTCCAGAGC...TACTTGGTGTTTTGAGTGAAGGGCATGTCCTCCCCAGAGGACGGAGCTGGATGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR GCA 90 bp CAAGGCGCTGGGGACTCCATGGCAAGGAAAACAGAGGGAGCCTCGGGACCACACCTCCCTGCACATCCGTaGACACCACACGTGGGGCTA +
Preference number: 4 (lower is better)
Translates to: QGAGDSMARKTEGASGPHLPAHP*TPHVGL
Trigger: TAGCCCCACGTGTGGTGTGCACGGATGTGCAGGGAG...GTGTGGTCCCGAGGCTCCCTCTGTTTTCCTTGCCATGGAGTCCCCAGCGCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR CCA 90 bp GTCAGGCTGGGAGCCTTTTCCATAGGAGGTGATGTGGGCAAATCTTGGGGACCCCAGCGCTGCGGCTGTTaGCGTCCAGGTGGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: VRLGAFSIGGDVGKSWGPQRCGC*RPGGPG
Trigger: TCCTGGGCCACCTGGACGCCAACAGCCGCAGCGCTG...GGGTCCCCAAGATTTGCCCACATCACCTCCTATGGAAAAGGCTCCCAGCCTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR TCA 90 bp GAGGAGGAGGTAGGAGGGCCAAGAAGGACCAGAGAGTCTCCACCTTGGCTTAGCCCAGCACCAGACGGATaGGGTCCACCACCACCTCCT +
Preference number: 4 (lower is better)
Translates to: EEEVGGPRRTRESPPWLSPAPDG*GPPPPP
Trigger: AGGAGGTGGTGGTGGACCTCATCCGTCTGGTGCTGG...GCTAAGCCAAGGTGGAGACTCTCTGGTCCTTCTTGGCCCTCCTACCTCCTCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR TCA 90 bp AGACGAGGAGGAGGTAGGAGGGCCAAGAAGGACCAGAGAGTCTCCACCTTGGCTTGCAGTGATGGTTCCTaGTGGGCTTGGTGGGGGCCG +
Preference number: 4 (lower is better)
Translates to: RRGGGRRAKKDQRVSTLACSDGS*WAWWGP
Trigger: CGGCCCCCACCAAGCCCATCAGGAACCATCACTGCA...AGCCAAGGTGGAGACTCTCTGGTCCTTCTTGGCCCTCCTACCTCCTCCTCGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR TCA 90 bp GAGGAGGAGGTAGGAGGGCCAAGAAGGACCAGAGAGTCTCCACCTTGGCTTAGCTGCAGTGATGGTTCCTaGTGGGCTTGGTGGGGGCCG +
Preference number: 4 (lower is better)
Translates to: EEEVGGPRRTRESPPWLSCSDGS*WAWWGP
Trigger: CGGCCCCCACCAAGCCCATCAGGAACCATCACTGCA...GCTAAGCCAAGGTGGAGACTCTCTGGTCCTTCTTGGCCCTCCTACCTCCTCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR TCA 90 bp CCATCCAGCTCCGTCCTCTGGGGAGGACATGCCCTTCACTCAAAACACCAAGTATGGTCGGGGTGGGCGTaGGGTGAGCCCCTCCTCAGA +
Preference number: 4 (lower is better)
Translates to: PSSSVLWGGHALHSKHQVWSGWA*GEPLLR
Trigger: TCTGAGGAGGGGCTCACCTCACGCCCACCCCGACCA...TACTTGGTGTTTTGAGTGAAGGGCATGTCCTCCCCAGAGGACGGAGCTGGATGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR TCA 90 bp GAGGAGGAGGTAGGAGGGCCAAGAAGGACCAGAGAGTCTCCACCTTGGCTTAGCAGGCAGTGCTCAGGATaGAGCTGCCACGGGGAACCC +
Preference number: 4 (lower is better)
Translates to: EEEVGGPRRTRESPPWLSRQCSG*SCHGEP
Trigger: GGGTTCCCCGTGGCAGCTTCATCCTGAGCACTGCCT...GCTAAGCCAAGGTGGAGACTCTCTGGTCCTTCTTGGCCCTCCTACCTCCTCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR GCA 90 bp CTTTCCCACAGGACCCCAACCGGCCAGCTGCCATTTTCTGGTCATGAAGAGGAAGCACCGTCGCAGCGCTaGGGCTGTTGGCGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: LSHRTPTGQLPFSGHEEEAPSQR*GCWRPG
Trigger: ACCTGGACGCCAACAGCCGCAGCGCTGCGACGGTGC...TTCCTCTTCATGACCAGAAAATGGCAGCTGGCCGGTTGGGGTCCTGTGGGAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR GCA 90 bp GAGGAGGAGGTAGGAGGGCCAAGAAGGACCAGAGAGTCTCCACCTTGGCTTAGCACAAGACTTCCACGATaGCCGCGCGCACCGTCGCAG +
Preference number: 4 (lower is better)
Translates to: EEEVGGPRRTRESPPWLSTRLPR*PRAPSQ
Trigger: CTGCGACGGTGCGCGCGGGCATCGTGGAAGTCTTGT...GCTAAGCCAAGGTGGAGACTCTCTGGTCCTTCTTGGCCCTCCTACCTCCTCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR GCA 90 bp GTCAGGCTGGGAGCCTTTTCCATAGGAGGTGATGTGGGCAAATCTTGGGGACCCCGCCGCTCACGCTCCTaGTCCTCCACTGCTACGCTG +
Preference number: 4 (lower is better)
Translates to: VRLGAFSIGGDVGKSWGPRRSRS*SSTATL
Trigger: CAGCGTAGCAGTGGAGGAGCAGGAGCGTGAGCGGCG...GGGTCCCCAAGATTTGCCCACATCACCTCCTATGGAAAAGGCTCCCAGCCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR GCA 90 bp GTCAGGCTGGGAGCCTTTTCCATAGGAGGTGATGTGGGCAAATCTTGGGGACCCAACTTCTCCACCACCTaGCGCCGCCGCTCACGCTCC +
Preference number: 4 (lower is better)
Translates to: VRLGAFSIGGDVGKSWGPNFSTT*RRRSRS
Trigger: GGAGCGTGAGCGGCGGCGGCAGGTGGTGGAGAAGTT...GGGTCCCCAAGATTTGCCCACATCACCTCCTATGGAAAAGGCTCCCAGCCTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR GCA 90 bp CTTGCTCTGCCTTTCCTCAACCCAGAAGCTCCAGGAACACCTTGGGACCCTCAGGAGGTGGGAAGCTGCTaGAGGGACCACACTCGCCCG +
Preference number: 4 (lower is better)
Translates to: LALPFLNPEAPGTPWDPQEVGSC*RDHTRP
Trigger: CGGGCGAGTGTGGTCCCTGCAGCAGCTTCCCACCTC...CTGAGGGTCCCAAGGTGTTCCTGGAGCTTCTGGGTTGAGGAAAGGCAGAGCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR GCA 90 bp AGACGAGGAGGAGGTAGGAGGGCCAAGAAGGACCAGAGAGTCTCCACCTTGGCTCTCCAGGGAGGCGACTaGCAAGTCCCAGAACCAGGG +
Preference number: 4 (lower is better)
Translates to: RRGGGRRAKKDQRVSTLALQGGD*QVPEPG
Trigger: CCCTGGTTCTGGGACTTGGCAGTCGCCTCCCTGGAG...AGCCAAGGTGGAGACTCTCTGGTCCTTCTTGGCCCTCCTACCTCCTCCTCGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR CCA 90 bp AGACGAGGAGGAGGTAGGAGGGCCAAGAAGGACCAGAGAGTCTCCACCTTGGCTCTGTTGGCGTCCAGGTaGCCCAGGAGCTGCTGGATG +
Preference number: 4 (lower is better)
Translates to: RRGGGRRAKKDQRVSTLALLASR*PRSCWM
Trigger: CATCCAGCAGCTCCTGGGCCACCTGGACGCCAACAG...AGCCAAGGTGGAGACTCTCTGGTCCTTCTTGGCCCTCCTACCTCCTCCTCGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR CCA 90 bp AAGGGGTCTCCATGGCTCCTCCCAAGCCACAAGCGTTGCCAGGTGGTGCTGATGACATCTCCAGTACTGTaGGCCCCACAGAGCCGGTGG +
Preference number: 4 (lower is better)
Translates to: KGSPWLLPSHKRCQVVLMTSPVL*APQSRW
Trigger: CCACCGGCTCTGTGGGGCCCACAGTACTGGAGATGT...CATCAGCACCACCTGGCAACGCTTGTGGCTTGGGAGGAGCCATGGAGACCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR CCA 90 bp GGCCGGGCGCTGGAGAACAGACAGTTCACAGGCGCTCAGCTGCACCAGTGTGGAAAGAGGTTGATGCTCTaGCAGTGGCAGGCCATGAGC +
Preference number: 4 (lower is better)
Translates to: GRALENRQFTGAQLHQCGKRLML*QWQAMS
Trigger: GCTCATGGCCTGCCACTGCCAGAGCATCAACCTCTT...TCCACACTGGTGCAGCTGAGCGCCTGTGAACTGTCTGTTCTCCAGCGCCCGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CCA 90 bp GCACTAGCAAAGGCCTGGAGATGGCGGAGCGCAGCGTGGGAGAGATCGAGAGCACTCTGCTGGGGGATATaGATAGGAGGGGAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: ALAKAWRWRSAAWERSRALCWGI*IGGEAV
Trigger: CACAGCCTCCCCTCCTATCCATATCCCCCAGCAGAG...TGCTCTCGATCTCTCCCACGCTGCGCTCCGCCATCTCCAGGCCTTTGCTAGTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CCA 90 bp GGAGAGAGCAGCCAACTCACCCCGATGCCTAACGCATTGGAGGTTCCCAGTCCTGCAGCCCCACCAGAGTaGGACAGTGGATACGGGCCA +
Preference number: 4 (lower is better)
Translates to: GESSQLTPMPNALEVPSPAAPPE*DSGYGP
Trigger: TGGCCCGTATCCACTGTCCCACTCTGGTGGGGCTGC...AGGACTGGGAACCTCCAATGCGTTAGGCATCGGGGTGAGTTGGCTGCTCTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CCA 90 bp CTGGGCAAGAGCAGGGAGAGAGAAGTTTATGAGGAAACTGAACAGGGGCCGGGCTGGCGGAGCGCAGCGTaGGAGAGATCGAGAGCAGCC +
Preference number: 4 (lower is better)
Translates to: LGKSREREVYEETEQGPGWRSAA*ERSRAA
Trigger: GGCTGCTCTCGATCTCTCCCACGCTGCGCTCCGCCA...GCCCGGCCCCTGTTCAGTTTCCTCATAAACTTCTCTCTCCCTGCTCTTGCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR TCA 90 bp ACAGGTGAGATGCTGATTGGTGAGACCTCCCTCAGGGAAGACGAGGAGGAGGTAAGCCGGTGGCAGCGATaGCCGCGGCTTCCGACAAGA +
Preference number: 4 (lower is better)
Translates to: TGEMLIGETSLREDEEEVSRWQR*PRLPTR
Trigger: TCTTGTCGGAAGCCGCGGTCATCGCTGCCACCGGCT...TACCTCCTCCTCGTCTTCCCTGAGGGAGGTCTCACCAATCAGCATCTCACCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR TCA 90 bp TCCATGTCTATATCAGCCCTAATGGGCAGAGAGGCTGGGGAATGCCAGCCTGTCGCGCGTAGTCGATGCTaGGCCGCAGCTGCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: SMSISALMGREAGECQPVARSRC*AAAASA
Trigger: TGCTGAGGCAGCTGCGGCTCAGCATCGACTACGCGC...GACAGGCTGGCATTCCCCAGCCTCTCTGCCCATTAGGGCTGATATAGACATGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR TCA 90 bp GAGAGAGAACCCAACTCTGAAAAACGTCCAGCAGACAGGACTGTGGGAGGCCAATCTTGGTGCCGAGGCTaGCCGCCCCGTCGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: EREPNSEKRPADRTVGGQSWCRG*PPRRSS
Trigger: GGAGCTACGACGGGGCGGTCAGCCTCGGCACCAAGA...TTGGCCTCCCACAGTCCTGTCTGCTGGACGTTTTTCAGAGTTGGGTTCTCTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR TCA 90 bp AACCCAAAGGGGTCTCCATGGCTCCTCCCAAGCCACAAGCGTTGCCAGGTGGTGTTTCTGCATCCTCCATaGGGGCGGTGGAGAGAAGGC +
Preference number: 4 (lower is better)
Translates to: NPKGSPWLLPSHKRCQVVFLHPP*GRWREG
Trigger: GCCTTCTCTCCACCGCCCTCATGGAGGATGCAGAAA...CACCACCTGGCAACGCTTGTGGCTTGGGAGGAGCCATGGAGACCCCTTTGGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR TCA 90 bp CACCTTGGCTTAGCCTGGGAGGCGCTGCCATCTAAGGTGATGTTTTCTCAGAGATGGTCGGGGTGGGCGTaGGGTGAGCCCCTCCTCAGA +
Preference number: 4 (lower is better)
Translates to: HLGLAWEALPSKVMFSQRWSGWA*GEPLLR
Trigger: TCTGAGGAGGGGCTCACCTCACGCCCACCCCGACCA...TCTCTGAGAAAACATCACCTTAGATGGCAGCGCCTCCCAGGCTAAGCCAAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR TCA 90 bp CATGATTCTCTGCCCCTGGCTGACACAAGAGAAGACAAAGAGGGCACAGGTGAGGAGCTGAGGCCGTCCTaGGAAGCCTGCCCTCCCCTG +
Preference number: 4 (lower is better)
Translates to: HDSLPLADTREDKEGTGEELRPS*EACPPL
Trigger: CAGGGGAGGGCAGGCTTCTCAGGACGGCCTCAGCTC...CTCACCTGTGCCCTCTTTGTCTTCTCTTGTGTCAGCCAGGGGCAGAGAATCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR GCA 90 bp CACCTTGGCTTAGCCTGGGAGGCGCTGCCATCTAAGGTGATGTTTTCTCAGAGAGCACCGTCGCAGCGCTaGGGCTGTTGGCGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: HLGLAWEALPSKVMFSQRAPSQR*GCWRPG
Trigger: ACCTGGACGCCAACAGCCGCAGCGCTGCGACGGTGC...TCTCTGAGAAAACATCACCTTAGATGGCAGCGCCTCCCAGGCTAAGCCAAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR GCA 90 bp CTTGCTCTGCCTTTCCTCAACCCAGAAGCTCCAGGAACACCTTGGGACCCTCAGACAAGACTTCCACGATaGCCGCGCGCACCGTCGCAG +
Preference number: 4 (lower is better)
Translates to: LALPFLNPEAPGTPWDPQTRLPR*PRAPSQ
Trigger: CTGCGACGGTGCGCGCGGGCATCGTGGAAGTCTTGT...CTGAGGGTCCCAAGGTGTTCCTGGAGCTTCTGGGTTGAGGAAAGGCAGAGCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR GCA 90 bp GAGGAGGAGGTAGGAGGGCCAAGAAGGACCAGAGAGTCTCCACCTTGGCTTAGCTATTCTCCCCCGTCCTaGCTGTGTCCACCGCCTGGT +
Preference number: 4 (lower is better)
Translates to: EEEVGGPRRTRESPPWLSYSPPS*LCPPPG
Trigger: ACCAGGCGGTGGACACAGGCAGGACGGGGGAGAATA...GCTAAGCCAAGGTGGAGACTCTCTGGTCCTTCTTGGCCCTCCTACCTCCTCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR GCA 90 bp AACCCAAAGGGGTCTCCATGGCTCCTCCCAAGCCACAAGCGTTGCCAGGTGGTGCTCCTGCTCCTCCACTaGTACGCTGTCCACAATGGC +
Preference number: 4 (lower is better)
Translates to: NPKGSPWLLPSHKRCQVVLLLLH*YAVHNG
Trigger: GCCATTGTGGACAGCGTAGCAGTGGAGGAGCAGGAG...CACCACCTGGCAACGCTTGTGGCTTGGGAGGAGCCATGGAGACCCCTTTGGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR GCA 90 bp ACAGGTGAGATGCTGATTGGTGAGACCTCCCTCAGGGAAGACGAGGAGGAGGTAAACTTCTCCACCACCTaGCGCCGCCGCTCACGCTCC +
Preference number: 4 (lower is better)
Translates to: TGEMLIGETSLREDEEEVNFSTT*RRRSRS
Trigger: GGAGCGTGAGCGGCGGCGGCAGGTGGTGGAGAAGTT...TACCTCCTCCTCGTCTTCCCTGAGGGAGGTCTCACCAATCAGCATCTCACCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR GCA 90 bp CACAGGACCCCAACCGGCCAGCTGCCATTTTCTGGTCATGAAGAGGAATTGGGACCGGGCCCCGCAGTGTaGAGCAATCTCCTCGAAGGG +
Preference number: 4 (lower is better)
Translates to: HRTPTGQLPFSGHEEELGPGPAV*SNLLEG
Trigger: CCCTTCGAGGAGATTGCTGCACACTGCGGGGCCCGG...TCCCAATTCCTCTTCATGACCAGAAAATGGCAGCTGGCCGGTTGGGGTCCTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR GCA 90 bp CTGTATGGTACTCTGGTGGGGGATGCATGTCATTACGCATTTGTCCAAACCCACAGAGGCCGGCGTCGCTaGGGCGTTCCCAGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: LYGTLVGDACHYAFVQTHRGRRR*GVPSQP
Trigger: GGGCTGGCTGGGAACGCCGCAGCGACGCCGGCCTCT...GTGGGTTTGGACAAATGCGTAATGACATGCATCCCCCACCAGAGTACCATACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR GCA 90 bp CCATCCAGCTCCGTCCTCTGGGGAGGACATGCCCTTCACTCAAAACACCAAGTACCGCCCTCCTGTCCCTaGCATACCGCGTCTTCCAGC +
Preference number: 4 (lower is better)
Translates to: PSSSVLWGGHALHSKHQVPPSCP*HTASSS
Trigger: GCTGGAAGACGCGGTATGGCAGGGACAGGAGGGCGG...TACTTGGTGTTTTGAGTGAAGGGCATGTCCTCCCCAGAGGACGGAGCTGGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR GCA 90 bp GCACTAGCAAAGGCCTGGAGATGGCGGAGCGCAGCGTGGGAGAGATCGAGAGCAGCCAACTCACCCCGATaGCTAACGCATTGGAGGTTC +
Preference number: 4 (lower is better)
Translates to: ALAKAWRWRSAAWERSRAANSPR*LTHWRF
Trigger: GAACCTCCAATGCGTTAGGCATCGGGGTGAGTTGGC...TGCTCTCGATCTCTCCCACGCTGCGCTCCGCCATCTCCAGGCCTTTGCTAGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR GCA 90 bp GGAGAGAGCAGCCAACTCACCCCGATGCCTAACGCATTGGAGGTTCCCAGTCCTTCACAGGCGCTCAGCTaGACCAGTGTGGAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: GESSQLTPMPNALEVPSPSQALS*TSVEGR
Trigger: CCTTCCCTCCACACTGGTGCAGCTGAGCGCCTGTGA...AGGACTGGGAACCTCCAATGCGTTAGGCATCGGGGTGAGTTGGCTGCTCTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CCA 90 bp TCACCAACCAAGTCTCCATCCAGCTCCGTCCTCTGGGGAGGACATGCCCTTCACTGGCCCAGGAGCTGCTaGATGACCAGGTGTGAGTGC +
Preference number: 4 (lower is better)
Translates to: SPTKSPSSSVLWGGHALHWPRSC*MTRCEC
Trigger: GCACTCACACCTGGTCATCCAGCAGCTCCTGGGCCA...GTGAAGGGCATGTCCTCCCCAGAGGACGGAGCTGGATGGAGACTTGGTTGGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CCA 90 bp AGACGAGGAGGAGGTAGGAGGGCCAAGAAGGACCAGAGAGTCTCCACCTTGGCTTGGCCCAGGAGCTGCTaGATGACCAGGTGTGAGTGC +
Preference number: 4 (lower is better)
Translates to: RRGGGRRAKKDQRVSTLAWPRSC*MTRCEC
Trigger: GCACTCACACCTGGTCATCCAGCAGCTCCTGGGCCA...AGCCAAGGTGGAGACTCTCTGGTCCTTCTTGGCCCTCCTACCTCCTCCTCGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR CCA 90 bp AGACGAGGAGGAGGTAGGAGGGCCAAGAAGGACCAGAGAGTCTCCACCTTGGCTCCAGCCTTTTGTACCTaGGGCGTAGGGCACCACAGC +
Preference number: 4 (lower is better)
Translates to: RRGGGRRAKKDQRVSTLAPAFCT*GVGHHS
Trigger: GCTGTGGTGCCCTACGCCCCAGGTACAAAAGGCTGG...AGCCAAGGTGGAGACTCTCTGGTCCTTCTTGGCCCTCCTACCTCCTCCTCGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CCA 90 bp AAGGGGTCTCCATGGCTCCTCCCAAGCCACAAGCGTTGCCAGGTGGTGCTGATGTTGATGCTCTGGCAGTaGCAGGCCATGAGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: KGSPWLLPSHKRCQVVLMLMLWQ*QAMSSW
Trigger: CCAGCTGCTCATGGCCTGCCACTGCCAGAGCATCAA...CATCAGCACCACCTGGCAACGCTTGTGGCTTGGGAGGAGCCATGGAGACCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR CCA 90 bp GTCAGGCTGGGAGCCTTTTCCATAGGAGGTGATGTGGGCAAATCTTGGGGACCCCAACAAACTGCCTCCTaGGTGGCTCTGCCCGGCTCC +
Preference number: 4 (lower is better)
Translates to: VRLGAFSIGGDVGKSWGPQQTAS*VALPGS
Trigger: GGAGCCGGGCAGAGCCACCCAGGAGGCAGTTTGTTG...GGGTCCCCAAGATTTGCCCACATCACCTCCTATGGAAAAGGCTCCCAGCCTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR CCA 90 bp GCTCTGCCTTTCCTCAACCCAGAAGCTCCAGGAACACCTTGGGACCCTCAGAAGTGGGGTCACAGGAAGTaGGCCTGGCCTGCCCTGATG +
Preference number: 4 (lower is better)
Translates to: ALPFLNPEAPGTPWDPQKWGHRK*AWPALM
Trigger: CATCAGGGCAGGCCAGGCCCACTTCCTGTGACCCCA...CTTCTGAGGGTCCCAAGGTGTTCCTGGAGCTTCTGGGTTGAGGAAAGGCAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR CCA 90 bp CTTGCTCTGCCTTTCCTCAACCCAGAAGCTCCAGGAACACCTTGGGACCCTCAGGAAGGGGAAGGTGACTaGCTTGGGCGGCCCCATGGT +
Preference number: 4 (lower is better)
Translates to: LALPFLNPEAPGTPWDPQEGEGD*LGRPHG
Trigger: ACCATGGGGCCGCCCAAGCCAGTCACCTTCCCCTTC...CTGAGGGTCCCAAGGTGTTCCTGGAGCTTCTGGGTTGAGGAAAGGCAGAGCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403714.8
3UTR CAA 72 bp GGAGAGAGCAGCCAACTCACCCCGATGCCTAACGCATaGGAGGTTCCCAGTCCTTGGAGCTGGAAGGGCCAT +
Preference number: 4 (lower is better)
Translates to: GESSQLTPMPNA*EVPSPWSWKGH
Trigger: ATGGCCCTTCCAGCTCCAAGGACTGGGAACCTCCAATGCGTTAGGCATCGGGGTGAGTTGGCTGCTCTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR TCA 90 bp CACTGTCAGCACCGAGCAACATTGGATATTCACCTGCAGGGTGCTAGGGAACTGAGGTGCTTGGAGGGGTaGGGGAGACCGGCTCTCTGC +
Preference number: 4 (lower is better)
Translates to: HCQHRATLDIHLQGARELRCLEG*GRPALC
Trigger: GCAGAGAGCCGGTCTCCCTCACCCCTCCAAGCACCT...CAGTTCCCTAGCACCCTGCAGGTGAATATCCAATGTTGCTCGGTGCTGACAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR TCA 90 bp CACCTTGGCTTAGCCTGGGAGGCGCTGCCATCTAAGGTGATGTTTTCTCAGAGAAGGTGCTTGGAGGGGTaGGGGAGACCGGCTCTCTGC +
Preference number: 4 (lower is better)
Translates to: HLGLAWEALPSKVMFSQRRCLEG*GRPALC
Trigger: GCAGAGAGCCGGTCTCCCTCACCCCTCCAAGCACCT...TCTCTGAGAAAACATCACCTTAGATGGCAGCGCCTCCCAGGCTAAGCCAAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR TCA 90 bp CACAGGCGCTCAGCTGCACCAGTGTGGAGGGAAGGGTGGTTCAGATGTGGCATTTTTCTGCATCCTCCATaGGGGCGGTGGAGAGAAGGC +
Preference number: 4 (lower is better)
Translates to: HRRSAAPVWREGWFRCGIFLHPP*GRWREG
Trigger: GCCTTCTCTCCACCGCCCTCATGGAGGATGCAGAAA...AATGCCACATCTGAACCACCCTTCCCTCCACACTGGTGCAGCTGAGCGCCTGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR TCA 90 bp CCATCCAGCTCCGTCCTCTGGGGAGGACATGCCCTTCACTCAAAACACCAAGTACCAGCACCAGACGGATaGGGTCCACCACCACCTCCT +
Preference number: 4 (lower is better)
Translates to: PSSSVLWGGHALHSKHQVPAPDG*GPPPPP
Trigger: AGGAGGTGGTGGTGGACCTCATCCGTCTGGTGCTGG...TACTTGGTGTTTTGAGTGAAGGGCATGTCCTCCCCAGAGGACGGAGCTGGATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR TCA 90 bp GAGGAGGAGGTAGGAGGGCCAAGAAGGACCAGAGAGTCTCCACCTTGGCTTAGCACCCCATCAAGATTCTaGGACAGCCTGGGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: EEEVGGPRRTRESPPWLSTPSRF*DSLGLS
Trigger: GGAGAGGCCCAGGCTGTCTCAGAATCTTGATGGGGT...GCTAAGCCAAGGTGGAGACTCTCTGGTCCTTCTTGGCCCTCCTACCTCCTCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR TCA 90 bp GAGGAGGAGGTAGGAGGGCCAAGAAGGACCAGAGAGTCTCCACCTTGGCTTAGCGACCGTAGGCTGCAGTaGTGGTTCCTGATGGGCTTG +
Preference number: 4 (lower is better)
Translates to: EEEVGGPRRTRESPPWLSDRRLQ*WFLMGL
Trigger: CAAGCCCATCAGGAACCATCACTGCAGCCTACGGTC...GCTAAGCCAAGGTGGAGACTCTCTGGTCCTTCTTGGCCCTCCTACCTCCTCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR TCA 90 bp TCACCAACCAAGTCTCCATCCAGCTCCGTCCTCTGGGGAGGACATGCCCTTCACCAGGTTGGGTTTCTCTaGCTCCAGCAGCTTGGCCAC +
Preference number: 4 (lower is better)
Translates to: SPTKSPSSSVLWGGHALHQVGFL*LQQLGH
Trigger: GTGGCCAAGCTGCTGGAGTCAGAGAAACCCAACCTG...GTGAAGGGCATGTCCTCCCCAGAGGACGGAGCTGGATGGAGACTTGGTTGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR TCA 90 bp AGACGAGGAGGAGGTAGGAGGGCCAAGAAGGACCAGAGAGTCTCCACCTTGGCTCAGGTTGGGTTTCTCTaGCTCCAGCAGCTTGGCCAC +
Preference number: 4 (lower is better)
Translates to: RRGGGRRAKKDQRVSTLAQVGFL*LQQLGH
Trigger: GTGGCCAAGCTGCTGGAGTCAGAGAAACCCAACCTG...AGCCAAGGTGGAGACTCTCTGGTCCTTCTTGGCCCTCCTACCTCCTCCTCGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR TCA 90 bp AGACGAGGAGGAGGTAGGAGGGCCAAGAAGGACCAGAGAGTCTCCACCTTGGCTCAGACCCCATCTCCTTaGGGAGCTCAGGCTCTTGGA +
Preference number: 4 (lower is better)
Translates to: RRGGGRRAKKDQRVSTLAQTPSP*GAQALG
Trigger: TCCAAGAGCCTGAGCTCCTCAAGGAGATGGGGTCTG...AGCCAAGGTGGAGACTCTCTGGTCCTTCTTGGCCCTCCTACCTCCTCCTCGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR TCA 90 bp GCACTAGCAAAGGCCTGGAGATGGCGGAGCGCAGCGTGGGAGAGATCGAGAGCAGACTTCTCCTACCTCTaGTTGCATCTGGGGAAAGGC +
Preference number: 4 (lower is better)
Translates to: ALAKAWRWRSAAWERSRADFSYL*LHLGKG
Trigger: GCCTTTCCCCAGATGCAATCAGAGGTAGGAGAAGTC...TGCTCTCGATCTCTCCCACGCTGCGCTCCGCCATCTCCAGGCCTTTGCTAGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR TCA 90 bp GCACTAGCAAAGGCCTGGAGATGGCGGAGCGCAGCGTGGGAGAGATCGAGAGCAGTTCTGGATAAGCTTTaGGGGCCCTGGGGTAGAGAT +
Preference number: 4 (lower is better)
Translates to: ALAKAWRWRSAAWERSRAVLDKL*GPWGRD
Trigger: ATCTCTACCCCAGGGCCCTCAAAGCTTATCCAGAAC...TGCTCTCGATCTCTCCCACGCTGCGCTCCGCCATCTCCAGGCCTTTGCTAGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR GCA 90 bp TCCATGTCTATATCAGCCCTAATGGGCAGAGAGGCTGGGGAATGCCAGCCTGTCACAAGACTTCCACGATaGCCGCGCGCACCGTCGCAG +
Preference number: 4 (lower is better)
Translates to: SMSISALMGREAGECQPVTRLPR*PRAPSQ
Trigger: CTGCGACGGTGCGCGCGGGCATCGTGGAAGTCTTGT...GACAGGCTGGCATTCCCCAGCCTCTCTGCCCATTAGGGCTGATATAGACATGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR GCA 90 bp AGACGAGGAGGAGGTAGGAGGGCCAAGAAGGACCAGAGAGTCTCCACCTTGGCTCTCCTGCTCCTCCACTaGTACGCTGTCCACAATGGC +
Preference number: 4 (lower is better)
Translates to: RRGGGRRAKKDQRVSTLALLLLH*YAVHNG
Trigger: GCCATTGTGGACAGCGTAGCAGTGGAGGAGCAGGAG...AGCCAAGGTGGAGACTCTCTGGTCCTTCTTGGCCCTCCTACCTCCTCCTCGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR GCA 90 bp AAATCTTGGGGACCCTGTAGTTCCCCTCCAAGATTATCTTGCTCTGCCTTTCCTAGAGGCCGGCGTCGCTaGGGCGTTCCCAGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: KSWGPCSSPPRLSCSAFPRGRRR*GVPSQP
Trigger: GGGCTGGCTGGGAACGCCGCAGCGACGCCGGCCTCT...AGGAAAGGCAGAGCAAGATAATCTTGGAGGGGAACTACAGGGTCCCCAAGATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR GCA 90 bp GAGGAGGAGGTAGGAGGGCCAAGAAGGACCAGAGAGTCTCCACCTTGGCTTAGCAAAAAGCCTTGGGGGTaGAGGAGCCTCCATGCCTGG +
Preference number: 4 (lower is better)
Translates to: EEEVGGPRRTRESPPWLSKKPWG*RSLHAW
Trigger: CCAGGCATGGAGGCTCCTGCACCCCCAAGGCTTTTT...GCTAAGCCAAGGTGGAGACTCTCTGGTCCTTCTTGGCCCTCCTACCTCCTCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR GCA 90 bp CTGGGCAAGAGCAGGGAGAGAGAAGTTTATGAGGAAACTGAACAGGGGCCGGGCAGGCCCCTGCACCCCTaGTTTGCCACCAAGCTACCT +
Preference number: 4 (lower is better)
Translates to: LGKSREREVYEETEQGPGRPLHP*FATKLP
Trigger: AGGTAGCTTGGTGGCAAAGCAGGGGTGCAGGGGCCT...GCCCGGCCCCTGTTCAGTTTCCTCATAAACTTCTCTCTCCCTGCTCTTGCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CCA 90 bp AGTGATGGAAAGGAAAAGCTGCCTGGGACCGGTGGAGAGGAAACAGCAGAATCTCAGCGCTGCGGCTGTTaGCGTCCAGGTGGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: SDGKEKLPGTGGEETAESQRCGC*RPGGPG
Trigger: TCCTGGGCCACCTGGACGCCAACAGCCGCAGCGCTG...AGATTCTGCTGTTTCCTCTCCACCGGTCCCAGGCAGCTTTTCCTTTCCATCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR CCA 90 bp AGACGAGGAGGAGGTAGGAGGGCCAAGAAGGACCAGAGAGTCTCCACCTTGGCTTTGATGACGGCCTCCTaGAACATGCGCTCCTCGTGC +
Preference number: 4 (lower is better)
Translates to: RRGGGRRAKKDQRVSTLALMTAS*NMRSSC
Trigger: GCACGAGGAGCGCATGTTCCAGGAGGCCGTCATCAA...AGCCAAGGTGGAGACTCTCTGGTCCTTCTTGGCCCTCCTACCTCCTCCTCGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR CCA 90 bp ACAGGTGAGATGCTGATTGGTGAGACCTCCCTCAGGGAAGACGAGGAGGAGGTAAGGTGGGCAGCGTGCTaGCAAAGGAGCCCACGGTCT +
Preference number: 4 (lower is better)
Translates to: TGEMLIGETSLREDEEEVRWAAC*QRSPRS
Trigger: AGACCGTGGGCTCCTTTGCCAGCACGCTGCCCACCT...TACCTCCTCCTCGTCTTCCCTGAGGGAGGTCTCACCAATCAGCATCTCACCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR CCA 90 bp CACTGTCAGCACCGAGCAACATTGGATATTCACCTGCAGGGTGCTAGGGAACTGCGCCTGGTGCAGGGATaGCCGCGGGACCTTGCTCAT +
Preference number: 4 (lower is better)
Translates to: HCQHRATLDIHLQGARELRLVQG*PRDLAH
Trigger: ATGAGCAAGGTCCCGCGGCCATCCCTGCACCAGGCG...CAGTTCCCTAGCACCCTGCAGGTGAATATCCAATGTTGCTCGGTGCTGACAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CCA 90 bp CACCTTGGCTTAGCCTGGGAGGCGCTGCCATCTAAGGTGATGTTTTCTCAGAGACGCCTGGTGCAGGGATaGCCGCGGGACCTTGCTCAT +
Preference number: 4 (lower is better)
Translates to: HLGLAWEALPSKVMFSQRRLVQG*PRDLAH
Trigger: ATGAGCAAGGTCCCGCGGCCATCCCTGCACCAGGCG...TCTCTGAGAAAACATCACCTTAGATGGCAGCGCCTCCCAGGCTAAGCCAAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR CCA 90 bp GCACTAGCAAAGGCCTGGAGATGGCGGAGCGCAGCGTGGGAGAGATCGAGAGCACTCGGGGAGCATGTATaGAGCCTCTTTCTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: ALAKAWRWRSAAWERSRALGEHV*SLFLPG
Trigger: ACCAGGAAGAAAGAGGCTCCATACATGCTCCCCGAG...TGCTCTCGATCTCTCCCACGCTGCGCTCCGCCATCTCCAGGCCTTTGCTAGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CCA 90 bp TCACCAACCAAGTCTCCATCCAGCTCCGTCCTCTGGGGAGGACATGCCCTTCACAGAGTCCTCGGGCTTTaGGAGCAGCCGGTCTCAATG +
Preference number: 4 (lower is better)
Translates to: SPTKSPSSSVLWGGHALHRVLGL*EQPVSM
Trigger: CATTGAGACCGGCTGCTCCCAAAGCCCGAGGACTCT...GTGAAGGGCATGTCCTCCCCAGAGGACGGAGCTGGATGGAGACTTGGTTGGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR CCA 90 bp CATGATTCTCTGCCCCTGGCTGACACAAGAGAAGACAAAGAGGGCACAGGTGAGCCGCCTGCCAAGGTCTaGGGTCACAGGAAGTGGGCC +
Preference number: 4 (lower is better)
Translates to: HDSLPLADTREDKEGTGEPPAKV*GHRKWA
Trigger: GGCCCACTTCCTGTGACCCCAGACCTTGGCAGGCGG...CTCACCTGTGCCCTCTTTGTCTTCTCTTGTGTCAGCCAGGGGCAGAGAATCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR CCA 90 bp GGCCGGGCGCTGGAGAACAGACAGTTCACAGGCGCTCAGCTGCACCAGTGTGGACCACCAAGCTACCTCTaGGCTAAGCTGACTCTTGAA +
Preference number: 4 (lower is better)
Translates to: GRALENRQFTGAQLHQCGPPSYL*AKLTLE
Trigger: TTCAAGAGTCAGCTTAGCCCAGAGGTAGCTTGGTGG...TCCACACTGGTGCAGCTGAGCGCCTGTGAACTGTCTGTTCTCCAGCGCCCGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR TCA 90 bp CACAGGCGCTCAGCTGCACCAGTGTGGAGGGAAGGGTGGTTCAGATGTGGCATTGGGAGTGCTTCTTCATaGAGACGGTGTCCTGTCGAG +
Preference number: 4 (lower is better)
Translates to: HRRSAAPVWREGWFRCGIGSASS*RRCPVE
Trigger: CTCGACAGGACACCGTCTTCATGAAGAAGCACTCCC...AATGCCACATCTGAACCACCCTTCCCTCCACACTGGTGCAGCTGAGCGCCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR TCA 90 bp GCACTAGCAAAGGCCTGGAGATGGCGGAGCGCAGCGTGGGAGAGATCGAGAGCAGGAAGAGGAGCTCAATaGCCACCCCATCAAGATTCT +
Preference number: 4 (lower is better)
Translates to: ALAKAWRWRSAAWERSRAGRGAQ*PPHQDS
Trigger: AGAATCTTGATGGGGTGGTCATTGAGCTCCTCTTCC...TGCTCTCGATCTCTCCCACGCTGCGCTCCGCCATCTCCAGGCCTTTGCTAGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR TCA 90 bp AGACGAGGAGGAGGTAGGAGGGCCAAGAAGGACCAGAGAGTCTCCACCTTGGCTCTCCCAGGACTTCACTaGTCTTGCTCTGGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: RRGGGRRAKKDQRVSTLALPGLH*SCSGGR
Trigger: TCTTCCGCCAGAGCAAGATCAGTGAAGTCCTGGGAG...AGCCAAGGTGGAGACTCTCTGGTCCTTCTTGGCCCTCCTACCTCCTCCTCGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR TCA 90 bp CTTGCTCTGCCTTTCCTCAACCCAGAAGCTCCAGGAACACCTTGGGACCCTCAGGACCGTAGGCTGCAGTaGTGGTTCCTGATGGGCTTG +
Preference number: 4 (lower is better)
Translates to: LALPFLNPEAPGTPWDPQDRRLQ*WFLMGL
Trigger: CAAGCCCATCAGGAACCATCACTGCAGCCTACGGTC...CTGAGGGTCCCAAGGTGTTCCTGGAGCTTCTGGGTTGAGGAAAGGCAGAGCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR TCA 90 bp GTCAGGCTGGGAGCCTTTTCCATAGGAGGTGATGTGGGCAAATCTTGGGGACCCTCTCCACGAAGAGGTTaGTGCTCTGGCAGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: VRLGAFSIGGDVGKSWGPSPRRG*CSGSGR
Trigger: CCTGCCACTGCCAGAGCATCAACCTCTTCGTGGAGA...GGGTCCCCAAGATTTGCCCACATCACCTCCTATGGAAAAGGCTCCCAGCCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR TCA 90 bp CAAGGCGCTGGGGACTCCATGGCAAGGAAAACAGAGGGAGCCTCGGGACCACACTTCTCTGCCCCTGGCTaGCACAAGAGAAGACAAAGA +
Preference number: 4 (lower is better)
Translates to: QGAGDSMARKTEGASGPHFSAPG*HKRRQR
Trigger: TCTTTGTCTTCTCTTGTGTCAGCCAGGGGCAGAGAA...GTGTGGTCCCGAGGCTCCCTCTGTTTTCCTTGCCATGGAGTCCCCAGCGCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR TCA 90 bp CACAGGACCCCAACCGGCCAGCTGCCATTTTCTGGTCATGAAGAGGAATTGGGAGCCTCGGGACCACACTaGTGCTTTCTGCCGATCTGC +
Preference number: 4 (lower is better)
Translates to: HRTPTGQLPFSGHEEELGASGPH*CFLPIC
Trigger: GCAGATCGGCAGAAAGCATCAGTGTGGTCCCGAGGC...TCCCAATTCCTCTTCATGACCAGAAAATGGCAGCTGGCCGGTTGGGGTCCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR TCA 90 bp CACAGGCGCTCAGCTGCACCAGTGTGGAGGGAAGGGTGGTTCAGATGTGGCATTATATCGGTCCCCCTGTaGGTGGGGAATGATGACCAG +
Preference number: 4 (lower is better)
Translates to: HRRSAAPVWREGWFRCGIISVPL*VGNDDQ
Trigger: CTGGTCATCATTCCCCACTCACAGGGGGACCGATAT...AATGCCACATCTGAACCACCCTTCCCTCCACACTGGTGCAGCTGAGCGCCTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR TCA 90 bp GGAGAGAGCAGCCAACTCACCCCGATGCCTAACGCATTGGAGGTTCCCAGTCCTACCTCTGGGCTAAGCTaGCTCTTGAAGGGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: GESSQLTPMPNALEVPSPTSGLS*LLKGGR
Trigger: CCTTCCTCCCTTCAAGAGTCAGCTTAGCCCAGAGGT...AGGACTGGGAACCTCCAATGCGTTAGGCATCGGGGTGAGTTGGCTGCTCTCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR GCA 90 bp CACCTTGGCTTAGCCTGGGAGGCGCTGCCATCTAAGGTGATGTTTTCTCAGAGAACAAGACTTCCACGATaGCCGCGCGCACCGTCGCAG +
Preference number: 4 (lower is better)
Translates to: HLGLAWEALPSKVMFSQRTRLPR*PRAPSQ
Trigger: CTGCGACGGTGCGCGCGGGCATCGTGGAAGTCTTGT...TCTCTGAGAAAACATCACCTTAGATGGCAGCGCCTCCCAGGCTAAGCCAAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR GCA 90 bp AAGGGGTCTCCATGGCTCCTCCCAAGCCACAAGCGTTGCCAGGTGGTGCTGATGGATTCTACCTCCACCTaGAGGGAGATGGTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: KGSPWLLPSHKRCQVVLMDSTST*REMVSP
Trigger: TGGAGAGACCATCTCCCTGCAGGTGGAGGTAGAATC...CATCAGCACCACCTGGCAACGCTTGTGGCTTGGGAGGAGCCATGGAGACCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR GCA 90 bp GTCAGGCTGGGAGCCTTTTCCATAGGAGGTGATGTGGGCAAATCTTGGGGACCCCTCCTGCTCCTCCACTaGTACGCTGTCCACAATGGC +
Preference number: 4 (lower is better)
Translates to: VRLGAFSIGGDVGKSWGPLLLLH*YAVHNG
Trigger: GCCATTGTGGACAGCGTAGCAGTGGAGGAGCAGGAG...GGGTCCCCAAGATTTGCCCACATCACCTCCTATGGAAAAGGCTCCCAGCCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR GCA 90 bp TCCAAGATTATCTTGCTCTGCCTTTCCTCAACCCAGAAGCTCCAGGAACACCTTGCTCTGGAGCAGCGATaGCCGGGCCCCGCAGTGTGC +
Preference number: 4 (lower is better)
Translates to: SKIILLCLSSTQKLQEHLALEQR*PGPAVC
Trigger: GCACACTGCGGGGCCCGGGCATCGCTGCTCCAGAGC...AAGGTGTTCCTGGAGCTTCTGGGTTGAGGAAAGGCAGAGCAAGATAATCTTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR GCA 90 bp CATGATTCTCTGCCCCTGGCTGACACAAGAGAAGACAAAGAGGGCACAGGTGAGCTGCTTCCTGCCCTTTaGTGTCCCCCGACCCCTCGT +
Preference number: 4 (lower is better)
Translates to: HDSLPLADTREDKEGTGELLPAL*CPPTPR
Trigger: ACGAGGGGTCGGGGGACAGCAAAGGGCAGGAAGCAG...CTCACCTGTGCCCTCTTTGTCTTCTCTTGTGTCAGCCAGGGGCAGAGAATCATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR GCA 90 bp GAACCCAACTCTGAAAAACGTCCAGCAGACAGGACTGTGGGAGGCCAACACAAGCACAGGCCCACCTCCTaGCAGCCCTGCATCCTGCTT +
Preference number: 4 (lower is better)
Translates to: EPNSEKRPADRTVGGQHKHRPTS*QPCILL
Trigger: AAGCAGGATGCAGGGCTGGCAGGAGGTGGGCCTGTG...CTTGTGTTGGCCTCCCACAGTCCTGTCTGCTGGACGTTTTTCAGAGTTGGGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR GCA 90 bp AAATCTTGGGGACCCTGTAGTTCCCCTCCAAGATTATCTTGCTCTGCCTTTCCTCCAGCACTCCCGGTCTaGTCGGCTCCGGGAGACCCG +
Preference number: 4 (lower is better)
Translates to: KSWGPCSSPPRLSCSAFPPALPV*SAPGDP
Trigger: CGGGTCTCCCGGAGCCGAGCAGACCGGGAGTGCTGG...AGGAAAGGCAGAGCAAGATAATCTTGGAGGGGAACTACAGGGTCCCCAAGATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402191.5
CDS-3UTR CCA 90 bp GCACTAGCAAAGGCCTGGAGATGGCGGAGCGCAGCGTGGGAGAGATCGAGAGCACTTATCCATGTGCTGTaGGTCCCAGATATTGGCCTG +
Preference number: 4 (lower is better)
Translates to: ALAKAWRWRSAAWERSRALIHVL*VPDIGL
Trigger: CAGGCCAATATCTGGGACCCACAGCACATGGATAAG...TGCTCTCGATCTCTCCCACGCTGCGCTCCGCCATCTCCAGGCCTTTGCTAGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CCA 90 bp ACAGGTGAGATGCTGATTGGTGAGACCTCCCTCAGGGAAGACGAGGAGGAGGTATCCTTCTCAGGTGCTTaGAGGGGTGAGGGAGACCGG +
Preference number: 4 (lower is better)
Translates to: TGEMLIGETSLREDEEEVSFSGA*RGEGDR
Trigger: CCGGTCTCCCTCACCCCTCCAAGCACCTGAGAAGGA...TACCTCCTCCTCGTCTTCCCTGAGGGAGGTCTCACCAATCAGCATCTCACCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR CCA 90 bp GAACCCAACTCTGAAAAACGTCCAGCAGACAGGACTGTGGGAGGCCAACACAAGCTGTTGGCGTCCAGGTaGCCCAGGAGCTGCTGGATG +
Preference number: 4 (lower is better)
Translates to: EPNSEKRPADRTVGGQHKLLASR*PRSCWM
Trigger: CATCCAGCAGCTCCTGGGCCACCTGGACGCCAACAG...CTTGTGTTGGCCTCCCACAGTCCTGTCTGCTGGACGTTTTTCAGAGTTGGGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CCA 90 bp CCATCCAGCTCCGTCCTCTGGGGAGGACATGCCCTTCACTCAAAACACCAAGTAACATCTCCAGTACTGTaGGCCCCACAGAGCCGGTGG +
Preference number: 4 (lower is better)
Translates to: PSSSVLWGGHALHSKHQVTSPVL*APQSRW
Trigger: CCACCGGCTCTGTGGGGCCCACAGTACTGGAGATGT...TACTTGGTGTTTTGAGTGAAGGGCATGTCCTCCCCAGAGGACGGAGCTGGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CCA 90 bp GCTCTGCCTTTCCTCAACCCAGAAGCTCCAGGAACACCTTGGGACCCTCAGAAGTTGATGACGGCCTCCTaGAACATGCGCTCCTCGTGC +
Preference number: 4 (lower is better)
Translates to: ALPFLNPEAPGTPWDPQKLMTAS*NMRSSC
Trigger: GCACGAGGAGCGCATGTTCCAGGAGGCCGTCATCAA...CTTCTGAGGGTCCCAAGGTGTTCCTGGAGCTTCTGGGTTGAGGAAAGGCAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CCA 90 bp CCTGAGAGACACCCCATGATTCTCTGCCCCTGGCTGACACAAGAGAAGACAAAGAGGTGGGCAGCGTGCTaGCAAAGGAGCCCACGGTCT +
Preference number: 4 (lower is better)
Translates to: PERHPMILCPWLTQEKTKRWAAC*QRSPRS
Trigger: AGACCGTGGGCTCCTTTGCCAGCACGCTGCCCACCT...CTTTGTCTTCTCTTGTGTCAGCCAGGGGCAGAGAATCATGGGGTGTCTCTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CCA 90 bp GCTCTGCCTTTCCTCAACCCAGAAGCTCCAGGAACACCTTGGGACCCTCAGAAGTTGATGCTCTGGCAGTaGCAGGCCATGAGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: ALPFLNPEAPGTPWDPQKLMLWQ*QAMSSW
Trigger: CCAGCTGCTCATGGCCTGCCACTGCCAGAGCATCAA...CTTCTGAGGGTCCCAAGGTGTTCCTGGAGCTTCTGGGTTGAGGAAAGGCAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CCA 90 bp GAGGAGGAGGTAGGAGGGCCAAGAAGGACCAGAGAGTCTCCACCTTGGCTTAGCAAGAGGTTGATGCTCTaGCAGTGGCAGGCCATGAGC +
Preference number: 4 (lower is better)
Translates to: EEEVGGPRRTRESPPWLSKRLML*QWQAMS
Trigger: GCTCATGGCCTGCCACTGCCAGAGCATCAACCTCTT...GCTAAGCCAAGGTGGAGACTCTCTGGTCCTTCTTGGCCCTCCTACCTCCTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CCA 90 bp GGGCTTGGAAGGGCAGGACTCACTGATGCTAGACCAAGGGCCAGGGTACCTCCCAGAAATCAACAGTCATaGGGGGAGAGCTTGGAAGGG +
Preference number: 4 (lower is better)
Translates to: GLGRAGLTDARPRARVPPRNQQS*GESLEG
Trigger: CCCTTCCAAGCTCTCCCCCCATGACTGTTGATTTCT...GGGAGGTACCCTGGCCCTTGGTCTAGCATCAGTGAGTCCTGCCCTTCCAAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR CCA 90 bp GCACTAGCAAAGGCCTGGAGATGGCGGAGCGCAGCGTGGGAGAGATCGAGAGCAAGCACCGAGCAACATTaGATATTCACCTGCAGGGTG +
Preference number: 4 (lower is better)
Translates to: ALAKAWRWRSAAWERSRASTEQH*IFTCRV
Trigger: CACCCTGCAGGTGAATATCCAATGTTGCTCGGTGCT...TGCTCTCGATCTCTCCCACGCTGCGCTCCGCCATCTCCAGGCCTTTGCTAGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR TCA 90 bp AAGGGGTCTCCATGGCTCCTCCCAAGCCACAAGCGTTGCCAGGTGGTGCTGATGCCCCTTGCAGGCCTTTaGTGCCTGACATTCGAATTT +
Preference number: 4 (lower is better)
Translates to: KGSPWLLPSHKRCQVVLMPLAGL*CLTFEF
Trigger: AAATTCGAATGTCAGGCATCAAAGGCCTGCAAGGGG...CATCAGCACCACCTGGCAACGCTTGTGGCTTGGGAGGAGCCATGGAGACCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR TCA 90 bp GATGTGGGCAAATCTTGGGGACCCTGTAGTTCCCCTCCAAGATTATCTTGCTCTAGGTGCTTGGAGGGGTaGGGGAGACCGGCTCTCTGC +
Preference number: 4 (lower is better)
Translates to: DVGKSWGPCSSPPRLSCSRCLEG*GRPALC
Trigger: GCAGAGAGCCGGTCTCCCTCACCCCTCCAAGCACCT...AGAGCAAGATAATCTTGGAGGGGAACTACAGGGTCCCCAAGATTTGCCCACATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR TCA 90 bp GATGTGGGCAAATCTTGGGGACCCTGTAGTTCCCCTCCAAGATTATCTTGCTCTAGCCGGTGGCAGCGATaGCCGCGGCTTCCGACAAGA +
Preference number: 4 (lower is better)
Translates to: DVGKSWGPCSSPPRLSCSSRWQR*PRLPTR
Trigger: TCTTGTCGGAAGCCGCGGTCATCGCTGCCACCGGCT...AGAGCAAGATAATCTTGGAGGGGAACTACAGGGTCCCCAAGATTTGCCCACATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR TCA 90 bp CCAAGATTATCTTGCTCTGCCTTTCCTCAACCCAGAAGCTCCAGGAACACCTTGAGCCGGTGGCAGCGATaGCCGCGGCTTCCGACAAGA +
Preference number: 4 (lower is better)
Translates to: PRLSCSAFPQPRSSRNTLSRWQR*PRLPTR
Trigger: TCTTGTCGGAAGCCGCGGTCATCGCTGCCACCGGCT...CAAGGTGTTCCTGGAGCTTCTGGGTTGAGGAAAGGCAGAGCAAGATAATCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR TCA 90 bp CTTGCTCTGCCTTTCCTCAACCCAGAAGCTCCAGGAACACCTTGGGACCCTCAGGCCTCAGCAGCGTGTTaGACATCTCCAGTACTGTGG +
Preference number: 4 (lower is better)
Translates to: LALPFLNPEAPGTPWDPQASAAC*TSPVLW
Trigger: CCACAGTACTGGAGATGTTCAACACGCTGCTGAGGC...CTGAGGGTCCCAAGGTGTTCCTGGAGCTTCTGGGTTGAGGAAAGGCAGAGCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR TCA 90 bp GATGTGGGCAAATCTTGGGGACCCTGTAGTTCCCCTCCAAGATTATCTTGCTCTGCGCGTAGTCGATGCTaGGCCGCAGCTGCCTCAGCA +
Preference number: 4 (lower is better)
Translates to: DVGKSWGPCSSPPRLSCSARSRC*AAAASA
Trigger: TGCTGAGGCAGCTGCGGCTCAGCATCGACTACGCGC...AGAGCAAGATAATCTTGGAGGGGAACTACAGGGTCCCCAAGATTTGCCCACATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR TCA 90 bp ACTTATCCTCTGTACGTCCATCCATTCATCCACTGTCAGCACCGAGCAACATTGTCTTGGTGCCGAGGCTaGCCGCCCCGTCGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: TYPLYVHPFIHCQHRATLSWCRG*PPRRSS
Trigger: GGAGCTACGACGGGGCGGTCAGCCTCGGCACCAAGA...CAATGTTGCTCGGTGCTGACAGTGGATGAATGGATGGACGTACAGAGGATAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR TCA 90 bp AGACGAGGAGGAGGTAGGAGGGCCAAGAAGGACCAGAGAGTCTCCACCTTGGCTGTTGCTAGGCAGGGCTaGCATCATGTTGTTGCACTG +
Preference number: 4 (lower is better)
Translates to: RRGGGRRAKKDQRVSTLAVARQG*HHVVAL
Trigger: CAGTGCAACAACATGATGTCAGCCCTGCCTAGCAAC...AGCCAAGGTGGAGACTCTCTGGTCCTTCTTGGCCCTCCTACCTCCTCCTCGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR TCA 90 bp ACAGGTGAGATGCTGATTGGTGAGACCTCCCTCAGGGAAGACGAGGAGGAGGTATTTCTGCATCCTCCATaGGGGCGGTGGAGAGAAGGC +
Preference number: 4 (lower is better)
Translates to: TGEMLIGETSLREDEEEVFLHPP*GRWREG
Trigger: GCCTTCTCTCCACCGCCCTCATGGAGGATGCAGAAA...TACCTCCTCCTCGTCTTCCCTGAGGGAGGTCTCACCAATCAGCATCTCACCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR TCA 90 bp ACAGGTGAGATGCTGATTGGTGAGACCTCCCTCAGGGAAGACGAGGAGGAGGTAACCCCATCAAGATTCTaGGACAGCCTGGGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: TGEMLIGETSLREDEEEVTPSRF*DSLGLS
Trigger: GGAGAGGCCCAGGCTGTCTCAGAATCTTGATGGGGT...TACCTCCTCCTCGTCTTCCCTGAGGGAGGTCTCACCAATCAGCATCTCACCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR TCA 90 bp GTCAGGCTGGGAGCCTTTTCCATAGGAGGTGATGTGGGCAAATCTTGGGGACCCCTCCCAGGACTTCACTaGTCTTGCTCTGGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: VRLGAFSIGGDVGKSWGPLPGLH*SCSGGR
Trigger: TCTTCCGCCAGAGCAAGATCAGTGAAGTCCTGGGAG...GGGTCCCCAAGATTTGCCCACATCACCTCCTATGGAAAAGGCTCCCAGCCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR TCA 90 bp GCTCTGCCTTTCCTCAACCCAGAAGCTCCAGGAACACCTTGGGACCCTCAGAAGTCAGTGTCTCATAGGTaGTCTCCTCGGCAGGCACTC +
Preference number: 4 (lower is better)
Translates to: ALPFLNPEAPGTPWDPQKSVSHR*SPRQAL
Trigger: GAGTGCCTGCCGAGGAGATCACCTATGAGACACTGA...CTTCTGAGGGTCCCAAGGTGTTCCTGGAGCTTCTGGGTTGAGGAAAGGCAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR TCA 90 bp CATGATTCTCTGCCCCTGGCTGACACAAGAGAAGACAAAGAGGGCACAGGTGAGGACCCACGTCACGGATaGGCCTCTCAGAGAGGTAGG +
Preference number: 4 (lower is better)
Translates to: HDSLPLADTREDKEGTGEDPRHG*ASQRGR
Trigger: CCTACCTCTCTGAGAGGCTCATCCGTGACGTGGGTC...CTCACCTGTGCCCTCTTTGTCTTCTCTTGTGTCAGCCAGGGGCAGAGAATCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR TCA 90 bp ACAGGTGAGATGCTGATTGGTGAGACCTCCCTCAGGGAAGACGAGGAGGAGGTATCTCCACGAAGAGGTTaGTGCTCTGGCAGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: TGEMLIGETSLREDEEEVSPRRG*CSGSGR
Trigger: CCTGCCACTGCCAGAGCATCAACCTCTTCGTGGAGA...TACCTCCTCCTCGTCTTCCCTGAGGGAGGTCTCACCAATCAGCATCTCACCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR TCA 90 bp GGAGAGAGCAGCCAACTCACCCCGATGCCTAACGCATTGGAGGTTCCCAGTCCTGCAAGTTCTCCTCATTaGCTTGGGCCACGTCCTGAA +
Preference number: 4 (lower is better)
Translates to: GESSQLTPMPNALEVPSPASSPH*LGPRPE
Trigger: TTCAGGACGTGGCCCAAGTCAATGAGGAGAACTTGC...AGGACTGGGAACCTCCAATGCGTTAGGCATCGGGGTGAGTTGGCTGCTCTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR TCA 90 bp AGACGAGGAGGAGGTAGGAGGGCCAAGAAGGACCAGAGAGTCTCCACCTTGGCTGCAAGTTCTCCTCATTaGCTTGGGCCACGTCCTGAA +
Preference number: 4 (lower is better)
Translates to: RRGGGRRAKKDQRVSTLAASSPH*LGPRPE
Trigger: TTCAGGACGTGGCCCAAGTCAATGAGGAGAACTTGC...AGCCAAGGTGGAGACTCTCTGGTCCTTCTTGGCCCTCCTACCTCCTCCTCGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR TCA 90 bp CCAAGATTATCTTGCTCTGCCTTTCCTCAACCCAGAAGCTCCAGGAACACCTTGGGGAGGAGCCCCAGGTaGGGTTCTGTCAGTGGCACC +
Preference number: 4 (lower is better)
Translates to: PRLSCSAFPQPRSSRNTLGRSPR*GSVSGT
Trigger: GGTGCCACTGACAGAACCTCACCTGGGGCTCCTCCC...CAAGGTGTTCCTGGAGCTTCTGGGTTGAGGAAAGGCAGAGCAAGATAATCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR TCA 90 bp TCACCAACCAAGTCTCCATCCAGCTCCGTCCTCTGGGGAGGACATGCCCTTCACCCACAGCAGAGATGGTaGCCACAAGGAAGAGCTTCA +
Preference number: 4 (lower is better)
Translates to: SPTKSPSSSVLWGGHALHPQQRW*PQGRAS
Trigger: TGAAGCTCTTCCTTGTGGTCACCATCTCTGCTGTGG...GTGAAGGGCATGTCCTCCCCAGAGGACGGAGCTGGATGGAGACTTGGTTGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR TCA 90 bp CACCTTGGCTTAGCCTGGGAGGCGCTGCCATCTAAGGTGATGTTTTCTCAGAGACCCAGAGGTCTGGCCTaGGCTGTTCAGAAGAACCCC +
Preference number: 4 (lower is better)
Translates to: HLGLAWEALPSKVMFSQRPRGLA*AVQKNP
Trigger: GGGGTTCTTCTGAACAGCTCAGGCCAGACCTCTGGG...TCTCTGAGAAAACATCACCTTAGATGGCAGCGCCTCCCAGGCTAAGCCAAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR TCA 90 bp GTAGTTCCCCTCCAAGATTATCTTGCTCTGCCTTTCCTCAACCCAGAAGCTCCAGGCCCCATGGTCCCCTaGAGTACAGGAGACCTGGCC +
Preference number: 4 (lower is better)
Translates to: VVPLQDYLALPFLNPEAPGPMVP*STGDLA
Trigger: GGCCAGGTCTCCTGTACTTCAGGGGACCATGGGGCC...TGGAGCTTCTGGGTTGAGGAAAGGCAGAGCAAGATAATCTTGGAGGGGAACTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR TCA 90 bp CTCAACCCAGAAGCTCCAGGAACACCTTGGGACCCTCAGAAGAAAGACATCAAACTTGGAAGGGGAAGGTaGCTGGCTTGGGCGGCCCCA +
Preference number: 4 (lower is better)
Translates to: LNPEAPGTPWDPQKKDIKLGRGR*LAWAAP
Trigger: TGGGGCCGCCCAAGCCAGTCACCTTCCCCTTCCAAG...TTTGATGTCTTTCTTCTGAGGGTCCCAAGGTGTTCCTGGAGCTTCTGGGTTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR GCA 90 bp CTCAACCCAGAAGCTCCAGGAACACCTTGGGACCCTCAGAAGAAAGACATCAAACGCCGCTCACGCTCCTaGTCCTCCACTGCTACGCTG +
Preference number: 4 (lower is better)
Translates to: LNPEAPGTPWDPQKKDIKRRSRS*SSTATL
Trigger: CAGCGTAGCAGTGGAGGAGCAGGAGCGTGAGCGGCG...TTTGATGTCTTTCTTCTGAGGGTCCCAAGGTGTTCCTGGAGCTTCTGGGTTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR GCA 90 bp AGACGAGGAGGAGGTAGGAGGGCCAAGAAGGACCAGAGAGTCTCCACCTTGGCTTCACAAACGAGTTGGTaGCGAGGATCTGCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: RRGGGRRAKKDQRVSTLASQTSW*RGSAGW
Trigger: CCAACCTGCAGATCCTCGGCACCAACTCGTTTGTGA...AGCCAAGGTGGAGACTCTCTGGTCCTTCTTGGCCCTCCTACCTCCTCCTCGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR GCA 90 bp CACCTTGGCTTAGCCTGGGAGGCGCTGCCATCTAAGGTGATGTTTTCTCAGAGAGAGGTTCAGGTAGGCTaGGCCCAGAGCATAGAGGGC +
Preference number: 4 (lower is better)
Translates to: HLGLAWEALPSKVMFSQREVQVG*AQSIEG
Trigger: GCCCTCTATGCTCTGGGCGCAGCCTACCTGAACCTC...TCTCTGAGAAAACATCACCTTAGATGGCAGCGCCTCCCAGGCTAAGCCAAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR GCA 90 bp GAGGAGGAGGTAGGAGGGCCAAGAAGGACCAGAGAGTCTCCACCTTGGCTTAGCATCACCTCATGGATGTaGTGGCAGAAGGCAGGCACT +
Preference number: 4 (lower is better)
Translates to: EEEVGGPRRTRESPPWLSITSWM*WQKAGT
Trigger: AGTGCCTGCCTTCTGCCAGCACATCCATGAGGTGAT...GCTAAGCCAAGGTGGAGACTCTCTGGTCCTTCTTGGCCCTCCTACCTCCTCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR GCA 90 bp GCTCTGCCTTTCCTCAACCCAGAAGCTCCAGGAACACCTTGGGACCCTCAGAAGCACCCCATGATTCTCTaGCCCTGGCTGACACAAGAG +
Preference number: 4 (lower is better)
Translates to: ALPFLNPEAPGTPWDPQKHPMIL*PWLTQE
Trigger: CTCTTGTGTCAGCCAGGGGCAGAGAATCATGGGGTG...CTTCTGAGGGTCCCAAGGTGTTCCTGGAGCTTCTGGGTTGAGGAAAGGCAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR GCA 90 bp ATTACGAGATATGGGCTACAGCATTTGTGGATTCACAACTCTGCCTCCACGCGCGAGGTGGGAAGCTGCTaGAGGGACCACACTCGCCCG +
Preference number: 4 (lower is better)
Translates to: ITRYGLQHLWIHNSASTREVGSC*RDHTRP
Trigger: CGGGCGAGTGTGGTCCCTGCAGCAGCTTCCCACCTC...GCGCGTGGAGGCAGAGTTGTGAATCCACAAATGCTGTAGCCCATATCTCGTAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR GCA 90 bp ACAGGTGAGATGCTGATTGGTGAGACCTCCCTCAGGGAAGACGAGGAGGAGGTACCAAGCCACAAGCGTTaGCAGGTGGTGCTGATGTCC +
Preference number: 4 (lower is better)
Translates to: TGEMLIGETSLREDEEEVPSHKR*QVVLMS
Trigger: GGACATCAGCACCACCTGGCAACGCTTGTGGCTTGG...TACCTCCTCCTCGTCTTCCCTGAGGGAGGTCTCACCAATCAGCATCTCACCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR GCA 90 bp CAAGGCGCTGGGGACTCCATGGCAAGGAAAACAGAGGGAGCCTCGGGACCACACCACACTGATGCTTTCTaGCGATCTGCCTCTTATCCA +
Preference number: 4 (lower is better)
Translates to: QGAGDSMARKTEGASGPHHTDAF*RSASYP
Trigger: TGGATAAGAGGCAGATCGGCAGAAAGCATCAGTGTG...GTGTGGTCCCGAGGCTCCCTCTGTTTTCCTTGCCATGGAGTCCCCAGCGCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR GCA 90 bp GCAGCCGGTCTCAATGGGCTTACTGACTCCTCTTCGCTCAAAATCACATCAGAGTCAGCACGACCCGCCTaGCAAGGTCTGGGGTCACAG +
Preference number: 4 (lower is better)
Translates to: AAGLNGLTDSSSLKITSESARPA*QGLGSQ
Trigger: CTGTGACCCCAGACCTTGGCAGGCGGGTCGTGCTGA...CTCTGATGTGATTTTGAGCGAAGAGGAGTCAGTAAGCCCATTGAGACCGGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR CCA 90 bp GGGCTTGGAAGGGCAGGACTCACTGATGCTAGACCAAGGGCCAGGGTACCTCCCTCATCATGGCTCGAGTaGCACATTTCACTGAATCGG +
Preference number: 4 (lower is better)
Translates to: GLGRAGLTDARPRARVPPSSWLE*HISLNR
Trigger: CCGATTCAGTGAAATGTGCCACTCGAGCCATGATGA...GGGAGGTACCCTGGCCCTTGGTCTAGCATCAGTGAGTCCTGCCCTTCCAAGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR CCA 90 bp GAGAGAGAACCCAACTCTGAAAAACGTCCAGCAGACAGGACTGTGGGAGGCCAATCCTTCTCAGGTGCTTaGAGGGGTGAGGGAGACCGG +
Preference number: 4 (lower is better)
Translates to: EREPNSEKRPADRTVGGQSFSGA*RGEGDR
Trigger: CCGGTCTCCCTCACCCCTCCAAGCACCTGAGAAGGA...TTGGCCTCCCACAGTCCTGTCTGCTGGACGTTTTTCAGAGTTGGGTTCTCTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CCA 90 bp GCACTAGCAAAGGCCTGGAGATGGCGGAGCGCAGCGTGGGAGAGATCGAGAGCAGGATGGCAAACACCTTaGGTTCCCAAAGAGAATGGT +
Preference number: 4 (lower is better)
Translates to: ALAKAWRWRSAAWERSRAGWQTP*VPKENG
Trigger: ACCATTCTCTTTGGGAACCCAAGGTGTTTGCCATCC...TGCTCTCGATCTCTCCCACGCTGCGCTCCGCCATCTCCAGGCCTTTGCTAGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CCA 90 bp GCAGCCGGTCTCAATGGGCTTACTGACTCCTCTTCGCTCAAAATCACATCAGAGCTGTTGGCGTCCAGGTaGCCCAGGAGCTGCTGGATG +
Preference number: 4 (lower is better)
Translates to: AAGLNGLTDSSSLKITSELLASR*PRSCWM
Trigger: CATCCAGCAGCTCCTGGGCCACCTGGACGCCAACAG...CTCTGATGTGATTTTGAGCGAAGAGGAGTCAGTAAGCCCATTGAGACCGGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR CCA 90 bp CACCTTGGCTTAGCCTGGGAGGCGCTGCCATCTAAGGTGATGTTTTCTCAGAGAACATCTCCAGTACTGTaGGCCCCACAGAGCCGGTGG +
Preference number: 4 (lower is better)
Translates to: HLGLAWEALPSKVMFSQRTSPVL*APQSRW
Trigger: CCACCGGCTCTGTGGGGCCCACAGTACTGGAGATGT...TCTCTGAGAAAACATCACCTTAGATGGCAGCGCCTCCCAGGCTAAGCCAAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR CCA 90 bp CCAAGATTATCTTGCTCTGCCTTTCCTCAACCCAGAAGCTCCAGGAACACCTTGCGCCTGGTGCAGGGATaGCCGCGGGACCTTGCTCAT +
Preference number: 4 (lower is better)
Translates to: PRLSCSAFPQPRSSRNTLRLVQG*PRDLAH
Trigger: ATGAGCAAGGTCCCGCGGCCATCCCTGCACCAGGCG...CAAGGTGTTCCTGGAGCTTCTGGGTTGAGGAAAGGCAGAGCAAGATAATCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CCA 90 bp GGCCGGGCGCTGGAGAACAGACAGTTCACAGGCGCTCAGCTGCACCAGTGTGGAATCATGTTGTTGCACTaGAAACCTGTGGATACCTGC +
Preference number: 4 (lower is better)
Translates to: GRALENRQFTGAQLHQCGIMLLH*KPVDTC
Trigger: GCAGGTATCCACAGGTTTCCAGTGCAACAACATGAT...TCCACACTGGTGCAGCTGAGCGCCTGTGAACTGTCTGTTCTCCAGCGCCCGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CCA 90 bp GAGGAGGAGGTAGGAGGGCCAAGAAGGACCAGAGAGTCTCCACCTTGGCTTAGCCTCGGGGAGCATGTATaGAGCCTCTTTCTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: EEEVGGPRRTRESPPWLSLGEHV*SLFLPG
Trigger: ACCAGGAAGAAAGAGGCTCCATACATGCTCCCCGAG...GCTAAGCCAAGGTGGAGACTCTCTGGTCCTTCTTGGCCCTCCTACCTCCTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR CCA 90 bp TCCATGTCTATATCAGCCCTAATGGGCAGAGAGGCTGGGGAATGCCAGCCTGTCCCACCTGCAGGGAGATaGTCTCTCCAATGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: SMSISALMGREAGECQPVPPAGR*SLQCSS
Trigger: GGAGGAGCATTGGAGAGACCATCTCCCTGCAGGTGG...GACAGGCTGGCATTCCCCAGCCTCTCTGCCCATTAGGGCTGATATAGACATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CCA 90 bp ACAGGTGAGATGCTGATTGGTGAGACCTCCCTCAGGGAAGACGAGGAGGAGGTACCACCTGCAGGGAGATaGTCTCTCCAATGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: TGEMLIGETSLREDEEEVPPAGR*SLQCSS
Trigger: GGAGGAGCATTGGAGAGACCATCTCCCTGCAGGTGG...TACCTCCTCCTCGTCTTCCCTGAGGGAGGTCTCACCAATCAGCATCTCACCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR CCA 90 bp GAGGAGGAGGTAGGAGGGCCAAGAAGGACCAGAGAGTCTCCACCTTGGCTTAGCTTTCATAGACGGGGATaGAGTGGTTCTGCGGCTGAC +
Preference number: 4 (lower is better)
Translates to: EEEVGGPRRTRESPPWLSFHRRG*SGSAAD
Trigger: GTCAGCCGCAGAACCACTCCATCCCCGTCTATGAAA...GCTAAGCCAAGGTGGAGACTCTCTGGTCCTTCTTGGCCCTCCTACCTCCTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR CCA 90 bp CTGGATGATGACAGTGTTCCACTCTCTCATCCAGGCGTGGTTGCGTGGGCATACTTGATGCTCTGGCAGTaGCAGGCCATGAGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LDDDSVPLSHPGVVAWAYLMLWQ*QAMSSW
Trigger: CCAGCTGCTCATGGCCTGCCACTGCCAGAGCATCAA...GTATGCCCACGCAACCACGCCTGGATGAGAGAGTGGAACACTGTCATCATCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CCA 90 bp CACAGGCGCTCAGCTGCACCAGTGTGGAGGGAAGGGTGGTTCAGATGTGGCATTCGAGGATCTGCAGGTTaGGTTTCTCTGACTCCAGCA +
Preference number: 4 (lower is better)
Translates to: HRRSAAPVWREGWFRCGIRGSAG*VSLTPA
Trigger: TGCTGGAGTCAGAGAAACCCAACCTGCAGATCCTCG...AATGCCACATCTGAACCACCCTTCCCTCCACACTGGTGCAGCTGAGCGCCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CCA 90 bp AAGGGGTCTCCATGGCTCCTCCCAAGCCACAAGCGTTGCCAGGTGGTGCTGATGACTTCACAAACGAGTTaGTGCCGAGGATCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: KGSPWLLPSHKRCQVVLMTSQTS*CRGSAG
Trigger: ACCTGCAGATCCTCGGCACCAACTCGTTTGTGAAGT...CATCAGCACCACCTGGCAACGCTTGTGGCTTGGGAGGAGCCATGGAGACCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR CCA 90 bp CCATCCAGCTCCGTCCTCTGGGGAGGACATGCCCTTCACTCAAAACACCAAGTACAGCAGACAGGACTGTaGGAGGCCAACACAAGCTCC +
Preference number: 4 (lower is better)
Translates to: PSSSVLWGGHALHSKHQVQQTGL*EANTSS
Trigger: GGAGCTTGTGTTGGCCTCCCACAGTCCTGTCTGCTG...TACTTGGTGTTTTGAGTGAAGGGCATGTCCTCCCCAGAGGACGGAGCTGGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CCA 90 bp GAGGAGGAGGTAGGAGGGCCAAGAAGGACCAGAGAGTCTCCACCTTGGCTTAGCAAAGGAAAAGCTGCCTaGGACCGGTGGAGAGGAAAC +
Preference number: 4 (lower is better)
Translates to: EEEVGGPRRTRESPPWLSKGKAA*DRWRGN
Trigger: GTTTCCTCTCCACCGGTCCCAGGCAGCTTTTCCTTT...GCTAAGCCAAGGTGGAGACTCTCTGGTCCTTCTTGGCCCTCCTACCTCCTCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR CCA 90 bp GCATCTGGGGAAAGGCTTGATGTCAAAGCTGTCCTCCATGTCTATATCAGCCCTGCTGCCCCAGGACGGTaGCACGGACACTCACCTCCT +
Preference number: 4 (lower is better)
Translates to: ASGERLDVKAVLHVYISPAAPGR*HGHSPP
Trigger: AGGAGGTGAGTGTCCGTGCCACCGTCCTGGGGCAGC...AGGGCTGATATAGACATGGAGGACAGCTTTGACATCAAGCCTTTCCCCAGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR TCA 90 bp GCACTAGCAAAGGCCTGGAGATGGCGGAGCGCAGCGTGGGAGAGATCGAGAGCAAGTGGCACATTTCACTaGATCGGGACACAAAGAAGT +
Preference number: 4 (lower is better)
Translates to: ALAKAWRWRSAAWERSRASGTFH*IGTQRS
Trigger: ACTTCTTTGTGTCCCGATTCAGTGAAATGTGCCACT...TGCTCTCGATCTCTCCCACGCTGCGCTCCGCCATCTCCAGGCCTTTGCTAGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR TCA 90 bp AGACGAGGAGGAGGTAGGAGGGCCAAGAAGGACCAGAGAGTCTCCACCTTGGCTCCCCTTGCAGGCCTTTaGTGCCTGACATTCGAATTT +
Preference number: 4 (lower is better)
Translates to: RRGGGRRAKKDQRVSTLAPLAGL*CLTFEF
Trigger: AAATTCGAATGTCAGGCATCAAAGGCCTGCAAGGGG...AGCCAAGGTGGAGACTCTCTGGTCCTTCTTGGCCCTCCTACCTCCTCCTCGTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR TCA 90 bp CACCTTGGCTTAGCCTGGGAGGCGCTGCCATCTAAGGTGATGTTTTCTCAGAGATTTCTGCATCCTCCATaGGGGCGGTGGAGAGAAGGC +
Preference number: 4 (lower is better)
Translates to: HLGLAWEALPSKVMFSQRFLHPP*GRWREG
Trigger: GCCTTCTCTCCACCGCCCTCATGGAGGATGCAGAAA...TCTCTGAGAAAACATCACCTTAGATGGCAGCGCCTCCCAGGCTAAGCCAAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR TCA 90 bp AAGGGGTCTCCATGGCTCCTCCCAAGCCACAAGCGTTGCCAGGTGGTGCTGATGTTGTGGCGGTTGCCATaGCGATCAATGAAACTGATG +
Preference number: 4 (lower is better)
Translates to: KGSPWLLPSHKRCQVVLMLWRLP*RSMKLM
Trigger: CATCAGTTTCATTGATCGTCATGGCAACCGCCACAA...CATCAGCACCACCTGGCAACGCTTGTGGCTTGGGAGGAGCCATGGAGACCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR TCA 90 bp CCATCCAGCTCCGTCCTCTGGGGAGGACATGCCCTTCACTCAAAACACCAAGTAGGGAGTGCTTCTTCATaGAGACGGTGTCCTGTCGAG +
Preference number: 4 (lower is better)
Translates to: PSSSVLWGGHALHSKHQVGSASS*RRCPVE
Trigger: CTCGACAGGACACCGTCTTCATGAAGAAGCACTCCC...TACTTGGTGTTTTGAGTGAAGGGCATGTCCTCCCCAGAGGACGGAGCTGGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR TCA 90 bp GTAGTTCCCCTCCAAGATTATCTTGCTCTGCCTTTCCTCAACCCAGAAGCTCCACCAGCACCAGACGGATaGGGTCCACCACCACCTCCT +
Preference number: 4 (lower is better)
Translates to: VVPLQDYLALPFLNPEAPPAPDG*GPPPPP
Trigger: AGGAGGTGGTGGTGGACCTCATCCGTCTGGTGCTGG...TGGAGCTTCTGGGTTGAGGAAAGGCAGAGCAAGATAATCTTGGAGGGGAACTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR TCA 90 bp GAGGAGGAGGTAGGAGGGCCAAGAAGGACCAGAGAGTCTCCACCTTGGCTTAGCGGAAGAGGAGCTCAATaGCCACCCCATCAAGATTCT +
Preference number: 4 (lower is better)
Translates to: EEEVGGPRRTRESPPWLSGRGAQ*PPHQDS
Trigger: AGAATCTTGATGGGGTGGTCATTGAGCTCCTCTTCC...GCTAAGCCAAGGTGGAGACTCTCTGGTCCTTCTTGGCCCTCCTACCTCCTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR TCA 90 bp ACAGGTGAGATGCTGATTGGTGAGACCTCCCTCAGGGAAGACGAGGAGGAGGTATCAGTGTCTCATAGGTaGTCTCCTCGGCAGGCACTC +
Preference number: 4 (lower is better)
Translates to: TGEMLIGETSLREDEEEVSVSHR*SPRQAL
Trigger: GAGTGCCTGCCGAGGAGATCACCTATGAGACACTGA...TACCTCCTCCTCGTCTTCCCTGAGGGAGGTCTCACCAATCAGCATCTCACCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR TCA 90 bp CTCAACCCAGAAGCTCCAGGAACACCTTGGGACCCTCAGAAGAAAGACATCAAATGCAGTGATGGTTCCTaGTGGGCTTGGTGGGGGCCG +
Preference number: 4 (lower is better)
Translates to: LNPEAPGTPWDPQKKDIKCSDGS*WAWWGP
Trigger: CGGCCCCCACCAAGCCCATCAGGAACCATCACTGCA...TTTGATGTCTTTCTTCTGAGGGTCCCAAGGTGTTCCTGGAGCTTCTGGGTTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR TCA 90 bp CACTGTCAGCACCGAGCAACATTGGATATTCACCTGCAGGGTGCTAGGGAACTGTCTCCACGAAGAGGTTaGTGCTCTGGCAGTGGCAGG +
Preference number: 4 (lower is better)
Translates to: HCQHRATLDIHLQGARELSPRRG*CSGSGR
Trigger: CCTGCCACTGCCAGAGCATCAACCTCTTCGTGGAGA...CAGTTCCCTAGCACCCTGCAGGTGAATATCCAATGTTGCTCGGTGCTGACAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR TCA 90 bp ACAGGTGAGATGCTGATTGGTGAGACCTCCCTCAGGGAAGACGAGGAGGAGGTAGCTTGGCCACCATCTTaGGGAAGCTCTCCACGAAGA +
Preference number: 4 (lower is better)
Translates to: TGEMLIGETSLREDEEEVAWPPS*GSSPRR
Trigger: TCTTCGTGGAGAGCTTCCTCAAGATGGTGGCCAAGC...TACCTCCTCCTCGTCTTCCCTGAGGGAGGTCTCACCAATCAGCATCTCACCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR TCA 90 bp AACATGAACAGACAACTGGGAGATGAGCAAGAGAGTGAGAGACACAGCAGGGACCGTGGGGCTATGAGCTaGGGCCGTCCTGAGAAGCCT +
Preference number: 4 (lower is better)
Translates to: NMNRQLGDEQESERHSRDRGAMS*GRPEKP
Trigger: AGGCTTCTCAGGACGGCCTCAGCTCATAGCCCCACG...GTCCCTGCTGTGTCTCTCACTCTCTTGCTCATCTCCCAGTTGTCTGTTCATGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR TCA 90 bp GATGTGGGCAAATCTTGGGGACCCTGTAGTTCCCCTCCAAGATTATCTTGCTCTCCACACGTGGGGCTATaGGCTGAGGCCGTCCTGAGA +
Preference number: 4 (lower is better)
Translates to: DVGKSWGPCSSPPRLSCSPHVGL*AEAVLR
Trigger: TCTCAGGACGGCCTCAGCTCATAGCCCCACGTGTGG...AGAGCAAGATAATCTTGGAGGGGAACTACAGGGTCCCCAAGATTTGCCCACATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR TCA 90 bp CATGCACACACACAGCCAGGTCGTGAGGCTCTAAGTGGACACAGACACATTACGCTGTCAGCAGAGTCCTaGCCAATGCTAGCCCTTCCC +
Preference number: 4 (lower is better)
Translates to: HAHTQPGREALSGHRHITLSAES*PMLALP
Trigger: GGGAAGGGCTAGCATTGGTCAGGACTCTGCTGACAG...CGTAATGTGTCTGTGTCCACTTAGAGCCTCACGACCTGGCTGTGTGTGTGCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR TCA 90 bp CTTTCCCACAGGACCCCAACCGGCCAGCTGCCATTTTCTGGTCATGAAGAGGAAACCTTTCCCCAGGTGTaGGGGAGATGCCTGGTTTCA +
Preference number: 4 (lower is better)
Translates to: LSHRTPTGQLPFSGHEEETFPQV*GRCLVS
Trigger: TGAAACCAGGCATCTCCCTCACACCTGGGGAAAGGT...TTCCTCTTCATGACCAGAAAATGGCAGCTGGCCGGTTGGGGTCCTGTGGGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR TCA 90 bp GAACCCAACTCTGAAAAACGTCCAGCAGACAGGACTGTGGGAGGCCAACACAAGCACACAGCCAGGTCGTaGGGCTCTAAGTGGACACAG +
Preference number: 4 (lower is better)
Translates to: EPNSEKRPADRTVGGQHKHTARS*GSKWTQ
Trigger: CTGTGTCCACTTAGAGCCTCACGACCTGGCTGTGTG...CTTGTGTTGGCCTCCCACAGTCCTGTCTGCTGGACGTTTTTCAGAGTTGGGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR TCA 90 bp GTCAGCACCGAGCAACATTGGATATTCACCTGCAGGGTGCTAGGGAACTGTGTGCTCTGTCACCTAGGCTaGAGTGCCGTGCTGCCATCA +
Preference number: 4 (lower is better)
Translates to: VSTEQHWIFTCRVLGNCVLCHLG*SAVLPS
Trigger: TGATGGCAGCACGGCACTTCAGCCTAGGTGACAGAG...CACACAGTTCCCTAGCACCCTGCAGGTGAATATCCAATGTTGCTCGGTGCTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR TCA 90 bp TCCATGTCTATATCAGCCCTAATGGGCAGAGAGGCTGGGGAATGCCAGCCTGTCACTGGCACTGATGGCTaGGAGTGGAGAGAGTTGTGG +
Preference number: 4 (lower is better)
Translates to: SMSISALMGREAGECQPVTGTDG*EWRELW
Trigger: CCACAACTCTCTCCACTCTCAGCCATCAGTGCCAGT...GACAGGCTGGCATTCCCCAGCCTCTCTGCCCATTAGGGCTGATATAGACATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR TCA 90 bp GGAGAGAGCAGCCAACTCACCCCGATGCCTAACGCATTGGAGGTTCCCAGTCCTGGCTTTAACTCGCTCTaGGGACTTATCCTCTGTACG +
Preference number: 4 (lower is better)
Translates to: GESSQLTPMPNALEVPSPGFNSL*GLILCT
Trigger: CGTACAGAGGATAAGTCCTCAGAGCGAGTTAAAGCC...AGGACTGGGAACCTCCAATGCGTTAGGCATCGGGGTGAGTTGGCTGCTCTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR GCA 90 bp AGACGAGGAGGAGGTAGGAGGGCCAAGAAGGACCAGAGAGTCTCCACCTTGGCTAACATGCGCTCCTCGTaGTCCTTGATGATCTTGGTG +
Preference number: 4 (lower is better)
Translates to: RRGGGRRAKKDQRVSTLANMRSS*SLMILV
Trigger: CACCAAGATCATCAAGGAGCACGAGGAGCGCATGTT...AGCCAAGGTGGAGACTCTCTGGTCCTTCTTGGCCCTCCTACCTCCTCCTCGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR GCA 90 bp AACCCAAAGGGGTCTCCATGGCTCCTCCCAAGCCACAAGCGTTGCCAGGTGGTGCGTTTGTTTCCTCCTTaGAGCTCAGGTAGATGTGTC +
Preference number: 4 (lower is better)
Translates to: NPKGSPWLLPSHKRCQVVRLFPP*SSGRCV
Trigger: GACACATCTACCTGAGCTGCAAGGAGGAAACAAACG...CACCACCTGGCAACGCTTGTGGCTTGGGAGGAGCCATGGAGACCCCTTTGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR GCA 90 bp GAGGAGGAGGTAGGAGGGCCAAGAAGGACCAGAGAGTCTCCACCTTGGCTTAGCAATCTCCTCGAAGGGTaGCTTCTGGAACTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: EEEVGGPRRTRESPPWLSNLLEG*LLELLH
Trigger: GTGGAGAAGTTCCAGAAGGCACCCTTCGAGGAGATT...GCTAAGCCAAGGTGGAGACTCTCTGGTCCTTCTTGGCCCTCCTACCTCCTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR GCA 90 bp AAATCTTGGGGACCCTGTAGTTCCCCTCCAAGATTATCTTGCTCTGCCTTTCCTCCGGGCCCCGCAGTGTaGAGCAATCTCCTCGAAGGG +
Preference number: 4 (lower is better)
Translates to: KSWGPCSSPPRLSCSAFPPGPAV*SNLLEG
Trigger: CCCTTCGAGGAGATTGCTGCACACTGCGGGGCCCGG...AGGAAAGGCAGAGCAAGATAATCTTGGAGGGGAACTACAGGGTCCCCAAGATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR GCA 90 bp GATGTGGGCAAATCTTGGGGACCCTGTAGTTCCCCTCCAAGATTATCTTGCTCTTGGACCACATGGCACTaGCATGGGAGGAGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: DVGKSWGPCSSPPRLSCSWTTWH*HGRSPR
Trigger: CCTGGGGCTCCTCCCATGGCAGTGCCATGTGGTCCA...AGAGCAAGATAATCTTGGAGGGGAACTACAGGGTCCCCAAGATTTGCCCACATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR GCA 90 bp GGGCTTGGAAGGGCAGGACTCACTGATGCTAGACCAAGGGCCAGGGTACCTCCCTGCAGAATGGGAACCTaGACCTTTTCTGTCTCTCTA +
Preference number: 4 (lower is better)
Translates to: GLGRAGLTDARPRARVPPCRMGT*TFSVSL
Trigger: TAGAGAGACAGAAAAGGTGCAGGTTCCCATTCTGCA...GGGAGGTACCCTGGCCCTTGGTCTAGCATCAGTGAGTCCTGCCCTTCCAAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR GCA 90 bp GCTCTGCCTTTCCTCAACCCAGAAGCTCCAGGAACACCTTGGGACCCTCAGAAGGTGGATTCACAACTCTaGCTCCACGCGCCAGAAATC +
Preference number: 4 (lower is better)
Translates to: ALPFLNPEAPGTPWDPQKVDSQL*LHAPEI
Trigger: GATTTCTGGCGCGTGGAGGCAGAGTTGTGAATCCAC...CTTCTGAGGGTCCCAAGGTGTTCCTGGAGCTTCTGGGTTGAGGAAAGGCAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR GCA 90 bp TGGCTCTGTAGCTGTGTAAGCATTTCGCCTTGCGCTTCTGAGTCACTTCACTCCCAGGATGAAGGCCCCTaGACCCCTGCTTTGCCACCA +
Preference number: 4 (lower is better)
Translates to: WLCSCVSISPCASESLHSQDEGP*TPALPP
Trigger: TGGTGGCAAAGCAGGGGTGCAGGGGCCTTCATCCTG...GGAGTGAAGTGACTCAGAAGCGCAAGGCGAAATGCTTACACAGCTACAGAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR GCA 90 bp CACTGTCAGCACCGAGCAACATTGGATATTCACCTGCAGGGTGCTAGGGAACTGGCAGAGCCCAGACTATaGATGGCTGGGAATGCCAGG +
Preference number: 4 (lower is better)
Translates to: HCQHRATLDIHLQGARELAEPRL*MAGNAR
Trigger: CCTGGCATTCCCAGCCATGCATAGTCTGGGCTCTGC...CAGTTCCCTAGCACCCTGCAGGTGAATATCCAATGTTGCTCGGTGCTGACAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR GCA 90 bp GAGGAGGAGGTAGGAGGGCCAAGAAGGACCAGAGAGTCTCCACCTTGGCTTAGCACGCCATTCTTAACATaGCTGGGACTCCACTCACTG +
Preference number: 4 (lower is better)
Translates to: EEEVGGPRRTRESPPWLSTPFLT*LGLHSL
Trigger: CAGTGAGTGGAGTCCCAGGCATGTTAAGAATGGCGT...GCTAAGCCAAGGTGGAGACTCTCTGGTCCTTCTTGGCCCTCCTACCTCCTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405108.5
CDS-3UTR CCA 90 bp GAGGAGGAGGTAGGAGGGCCAAGAAGGACCAGAGAGTCTCCACCTTGGCTTAGCCTTATCCATGTGCTGTaGGTCCCAGATATTGGCCTG +
Preference number: 4 (lower is better)
Translates to: EEEVGGPRRTRESPPWLSLIHVL*VPDIGL
Trigger: CAGGCCAATATCTGGGACCCACAGCACATGGATAAG...GCTAAGCCAAGGTGGAGACTCTCTGGTCCTTCTTGGCCCTCCTACCTCCTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR CCA 90 bp GTCAGCACCGAGCAACATTGGATATTCACCTGCAGGGTGCTAGGGAACTGTGTGTTGATGACGGCCTCCTaGAACATGCGCTCCTCGTGC +
Preference number: 4 (lower is better)
Translates to: VSTEQHWIFTCRVLGNCVLMTAS*NMRSSC
Trigger: GCACGAGGAGCGCATGTTCCAGGAGGCCGTCATCAA...CACACAGTTCCCTAGCACCCTGCAGGTGAATATCCAATGTTGCTCGGTGCTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CCA 90 bp GAGAGAGAACCCAACTCTGAAAAACGTCCAGCAGACAGGACTGTGGGAGGCCAATTGATGACGGCCTCCTaGAACATGCGCTCCTCGTGC +
Preference number: 4 (lower is better)
Translates to: EREPNSEKRPADRTVGGQLMTAS*NMRSSC
Trigger: GCACGAGGAGCGCATGTTCCAGGAGGCCGTCATCAA...TTGGCCTCCCACAGTCCTGTCTGCTGGACGTTTTTCAGAGTTGGGTTCTCTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CCA 90 bp CTCAACCCAGAAGCTCCAGGAACACCTTGGGACCCTCAGAAGAAAGACATCAAAAGGTGGGCAGCGTGCTaGCAAAGGAGCCCACGGTCT +
Preference number: 4 (lower is better)
Translates to: LNPEAPGTPWDPQKKDIKRWAAC*QRSPRS
Trigger: AGACCGTGGGCTCCTTTGCCAGCACGCTGCCCACCT...TTTGATGTCTTTCTTCTGAGGGTCCCAAGGTGTTCCTGGAGCTTCTGGGTTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CCA 90 bp GAGGAGGAGGTAGGAGGGCCAAGAAGGACCAGAGAGTCTCCACCTTGGCTTAGCGATTCTGAGACAGCCTaGGCCTCTCCACAAACACAT +
Preference number: 4 (lower is better)
Translates to: EEEVGGPRRTRESPPWLSDSETA*ASPQTH
Trigger: ATGTGTTTGTGGAGAGGCCCAGGCTGTCTCAGAATC...GCTAAGCCAAGGTGGAGACTCTCTGGTCCTTCTTGGCCCTCCTACCTCCTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR CCA 90 bp GTCAGGCTGGGAGCCTTTTCCATAGGAGGTGATGTGGGCAAATCTTGGGGACCCTTTCATAGACGGGGATaGAGTGGTTCTGCGGCTGAC +
Preference number: 4 (lower is better)
Translates to: VRLGAFSIGGDVGKSWGPFHRRG*SGSAAD
Trigger: GTCAGCCGCAGAACCACTCCATCCCCGTCTATGAAA...GGGTCCCCAAGATTTGCCCACATCACCTCCTATGGAAAAGGCTCCCAGCCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CCA 90 bp TGGCTCTGTAGCTGTGTAAGCATTTCGCCTTGCGCTTCTGAGTCACTTCACTCCCCAGCCTTTTGTACCTaGGGCGTAGGGCACCACAGC +
Preference number: 4 (lower is better)
Translates to: WLCSCVSISPCASESLHSPAFCT*GVGHHS
Trigger: GCTGTGGTGCCCTACGCCCCAGGTACAAAAGGCTGG...GGAGTGAAGTGACTCAGAAGCGCAAGGCGAAATGCTTACACAGCTACAGAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CCA 90 bp GAGGAGGAGGTAGGAGGGCCAAGAAGGACCAGAGAGTCTCCACCTTGGCTTAGCACTTCACAAACGAGTTaGTGCCGAGGATCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: EEEVGGPRRTRESPPWLSTSQTS*CRGSAG
Trigger: ACCTGCAGATCCTCGGCACCAACTCGTTTGTGAAGT...GCTAAGCCAAGGTGGAGACTCTCTGGTCCTTCTTGGCCCTCCTACCTCCTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CCA 90 bp GCACTAGCAAAGGCCTGGAGATGGCGGAGCGCAGCGTGGGAGAGATCGAGAGCATGTCCTCCTCGATGTTaGCAAACTTCACAAACGAGT +
Preference number: 4 (lower is better)
Translates to: ALAKAWRWRSAAWERSRACPPRC*QTSQTS
Trigger: ACTCGTTTGTGAAGTTTGCCAACATCGAGGAGGACA...TGCTCTCGATCTCTCCCACGCTGCGCTCCGCCATCTCCAGGCCTTTGCTAGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CCA 90 bp GAGGAGGAGGTAGGAGGGCCAAGAAGGACCAGAGAGTCTCCACCTTGGCTTAGCGTCTCTATCACCTCATaGATGTGCTGGCAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: EEEVGGPRRTRESPPWLSVSITS*MCWQKA
Trigger: TGCCTTCTGCCAGCACATCCATGAGGTGATAGAGAC...GCTAAGCCAAGGTGGAGACTCTCTGGTCCTTCTTGGCCCTCCTACCTCCTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR CCA 90 bp CATGCACACACACAGCCAGGTCGTGAGGCTCTAAGTGGACACAGACACATTACGCACCTTGGCTTAGCCTaGGAGGCGCTGCCATCTAAG +
Preference number: 4 (lower is better)
Translates to: HAHTQPGREALSGHRHITHLGLA*EALPSK
Trigger: CTTAGATGGCAGCGCCTCCCAGGCTAAGCCAAGGTG...CGTAATGTGTCTGTGTCCACTTAGAGCCTCACGACCTGGCTGTGTGTGTGCATG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR CCA 90 bp CACCTTGGCTTAGCCTGGGAGGCGCTGCCATCTAAGGTGATGTTTTCTCAGAGACACCTTGGCTTAGCCTaGGAGGCGCTGCCATCTAAG +
Preference number: 4 (lower is better)
Translates to: HLGLAWEALPSKVMFSQRHLGLA*EALPSK
Trigger: CTTAGATGGCAGCGCCTCCCAGGCTAAGCCAAGGTG...TCTCTGAGAAAACATCACCTTAGATGGCAGCGCCTCCCAGGCTAAGCCAAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR CCA 90 bp GAACCCAACTCTGAAAAACGTCCAGCAGACAGGACTGTGGGAGGCCAACACAAGTGTGAGGGAGATGCCTaGTTTCAGCACGACCCGCCT +
Preference number: 4 (lower is better)
Translates to: EPNSEKRPADRTVGGQHKCEGDA*FQHDPP
Trigger: AGGCGGGTCGTGCTGAAACCAGGCATCTCCCTCACA...CTTGTGTTGGCCTCCCACAGTCCTGTCTGCTGGACGTTTTTCAGAGTTGGGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR CCA 90 bp CTGGATGATGACAGTGTTCCACTCTCTCATCCAGGCGTGGTTGCGTGGGCATACAGCATCCTGAGTACCTaGGACCACAGGTGCACGTCA +
Preference number: 4 (lower is better)
Translates to: LDDDSVPLSHPGVVAWAYSILST*DHRCTS
Trigger: TGACGTGCACCTGTGGTCCCAGGTACTCAGGATGCT...GTATGCCCACGCAACCACGCCTGGATGAGAGAGTGGAACACTGTCATCATCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CCA 90 bp GTGGGGAAAAATGAAATGGCAGAGCCCAGACTATGCATGGCTGGGAATGCCAGGACCAGAGTGGGACAGTaGATACGGGCCAGAGCAGGT +
Preference number: 4 (lower is better)
Translates to: VGKNEMAEPRLCMAGNARTRVGQ*IRARAG
Trigger: ACCTGCTCTGGCCCGTATCCACTGTCCCACTCTGGT...CCTGGCATTCCCAGCCATGCATAGTCTGGGCTCTGCCATTTCATTTTTCCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CCA 90 bp TCCATGTCTATATCAGCCCTAATGGGCAGAGAGGCTGGGGAATGCCAGCCTGTCTCAGCTGCACCAGTGTaGAGGGAAGGGTGGTTCAGA +
Preference number: 4 (lower is better)
Translates to: SMSISALMGREAGECQPVSAAPV*REGWFR
Trigger: TCTGAACCACCCTTCCCTCCACACTGGTGCAGCTGA...GACAGGCTGGCATTCCCCAGCCTCTCTGCCCATTAGGGCTGATATAGACATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR TCA 90 bp GGGCTTGGAAGGGCAGGACTCACTGATGCTAGACCAAGGGCCAGGGTACCTCCCCTACATGCTGTAGATTaGAAAGCAGTGATGGAACGA +
Preference number: 4 (lower is better)
Translates to: GLGRAGLTDARPRARVPPLHAVD*KAVMER
Trigger: TCGTTCCATCACTGCTTTTCAATCTACAGCATGTAG...GGGAGGTACCCTGGCCCTTGGTCTAGCATCAGTGAGTCCTGCCCTTCCAAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR TCA 90 bp CACCTTGGCTTAGCCTGGGAGGCGCTGCCATCTAAGGTGATGTTTTCTCAGAGAGCCTCAGCAGCGTGTTaGACATCTCCAGTACTGTGG +
Preference number: 4 (lower is better)
Translates to: HLGLAWEALPSKVMFSQRASAAC*TSPVLW
Trigger: CCACAGTACTGGAGATGTTCAACACGCTGCTGAGGC...TCTCTGAGAAAACATCACCTTAGATGGCAGCGCCTCCCAGGCTAAGCCAAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR TCA 90 bp ACAGGTGAGATGCTGATTGGTGAGACCTCCCTCAGGGAAGACGAGGAGGAGGTAGTTGCTAGGCAGGGCTaGCATCATGTTGTTGCACTG +
Preference number: 4 (lower is better)
Translates to: TGEMLIGETSLREDEEEVVARQG*HHVVAL
Trigger: CAGTGCAACAACATGATGTCAGCCCTGCCTAGCAAC...TACCTCCTCCTCGTCTTCCCTGAGGGAGGTCTCACCAATCAGCATCTCACCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR TCA 90 bp GAACCCAACTCTGAAAAACGTCCAGCAGACAGGACTGTGGGAGGCCAACACAAGGGGAGTGCTTCTTCATaGAGACGGTGTCCTGTCGAG +
Preference number: 4 (lower is better)
Translates to: EPNSEKRPADRTVGGQHKGSASS*RRCPVE
Trigger: CTCGACAGGACACCGTCTTCATGAAGAAGCACTCCC...CTTGTGTTGGCCTCCCACAGTCCTGTCTGCTGGACGTTTTTCAGAGTTGGGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR TCA 90 bp CACCTTGGCTTAGCCTGGGAGGCGCTGCCATCTAAGGTGATGTTTTCTCAGAGAGGGAGTGCTTCTTCATaGAGACGGTGTCCTGTCGAG +
Preference number: 4 (lower is better)
Translates to: HLGLAWEALPSKVMFSQRGSASS*RRCPVE
Trigger: CTCGACAGGACACCGTCTTCATGAAGAAGCACTCCC...TCTCTGAGAAAACATCACCTTAGATGGCAGCGCCTCCCAGGCTAAGCCAAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR TCA 90 bp CATGATTCTCTGCCCCTGGCTGACACAAGAGAAGACAAAGAGGGCACAGGTGAGTCAGTGTCTCATAGGTaGTCTCCTCGGCAGGCACTC +
Preference number: 4 (lower is better)
Translates to: HDSLPLADTREDKEGTGESVSHR*SPRQAL
Trigger: GAGTGCCTGCCGAGGAGATCACCTATGAGACACTGA...CTCACCTGTGCCCTCTTTGTCTTCTCTTGTGTCAGCCAGGGGCAGAGAATCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR TCA 90 bp TCACCAACCAAGTCTCCATCCAGCTCCGTCCTCTGGGGAGGACATGCCCTTCACAAGTTTTTCTGGAGCTaGGAGGGCATAGAAGGTCAG +
Preference number: 4 (lower is better)
Translates to: SPTKSPSSSVLWGGHALHKFFWS*EGIEGQ
Trigger: CTGACCTTCTATGCCCTCTCAGCTCCAGAAAAACTT...GTGAAGGGCATGTCCTCCCCAGAGGACGGAGCTGGATGGAGACTTGGTTGGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR TCA 90 bp AGACGAGGAGGAGGTAGGAGGGCCAAGAAGGACCAGAGAGTCTCCACCTTGGCTCGCTGCCATCTAAGGTaGTGTTTTCTCAGAGATCAC +
Preference number: 4 (lower is better)
Translates to: RRGGGRRAKKDQRVSTLARCHLR*CFLRDH
Trigger: GTGATCTCTGAGAAAACATCACCTTAGATGGCAGCG...AGCCAAGGTGGAGACTCTCTGGTCCTTCTTGGCCCTCCTACCTCCTCCTCGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR TCA 90 bp CACCTTGGCTTAGCCTGGGAGGCGCTGCCATCTAAGGTGATGTTTTCTCAGAGAGCACAGGTGAGATGCTaGTTGGTGAGACCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: HLGLAWEALPSKVMFSQRAQVRC*LVRPPS
Trigger: TGAGGGAGGTCTCACCAATCAGCATCTCACCTGTGC...TCTCTGAGAAAACATCACCTTAGATGGCAGCGCCTCCCAGGCTAAGCCAAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR TCA 90 bp TCACCAACCAAGTCTCCATCCAGCTCCGTCCTCTGGGGAGGACATGCCCTTCACCTTCAAGTACTTCAGTaGGTCCAGGCCTCCTCTTTT +
Preference number: 4 (lower is better)
Translates to: SPTKSPSSSVLWGGHALHLQVLQ*VQASSF
Trigger: AAAAGAGGAGGCCTGGACTCACTGAAGTACTTGAAG...GTGAAGGGCATGTCCTCCCCAGAGGACGGAGCTGGATGGAGACTTGGTTGGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR GCA 90 bp CACCTTGGCTTAGCCTGGGAGGCGCTGCCATCTAAGGTGATGTTTTCTCAGAGATTCCTCACCACCCCTTaGAGGCCTTTGATGCCTGAC +
Preference number: 4 (lower is better)
Translates to: HLGLAWEALPSKVMFSQRFLTTP*RPLMPD
Trigger: GTCAGGCATCAAAGGCCTGCAAGGGGTGGTGAGGAA...TCTCTGAGAAAACATCACCTTAGATGGCAGCGCCTCCCAGGCTAAGCCAAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR GCA 90 bp GTCAGGCTGGGAGCCTTTTCCATAGGAGGTGATGTGGGCAAATCTTGGGGACCCAACATGCGCTCCTCGTaGTCCTTGATGATCTTGGTG +
Preference number: 4 (lower is better)
Translates to: VRLGAFSIGGDVGKSWGPNMRSS*SLMILV
Trigger: CACCAAGATCATCAAGGAGCACGAGGAGCGCATGTT...GGGTCCCCAAGATTTGCCCACATCACCTCCTATGGAAAAGGCTCCCAGCCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR GCA 90 bp GATGTGGGCAAATCTTGGGGACCCTGTAGTTCCCCTCCAAGATTATCTTGCTCTTATTCTCCCCCGTCCTaGCTGTGTCCACCGCCTGGT +
Preference number: 4 (lower is better)
Translates to: DVGKSWGPCSSPPRLSCSYSPPS*LCPPPG
Trigger: ACCAGGCGGTGGACACAGGCAGGACGGGGGAGAATA...AGAGCAAGATAATCTTGGAGGGGAACTACAGGGTCCCCAAGATTTGCCCACATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR GCA 90 bp GGAGAGAGCAGCCAACTCACCCCGATGCCTAACGCATTGGAGGTTCCCAGTCCTAAACCTGTGGATACCTaGAGGAGGGATTTTAGCAGC +
Preference number: 4 (lower is better)
Translates to: GESSQLTPMPNALEVPSPKPVDT*RRDFSS
Trigger: GCTGCTAAAATCCCTCCTGCAGGTATCCACAGGTTT...AGGACTGGGAACCTCCAATGCGTTAGGCATCGGGGTGAGTTGGCTGCTCTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR GCA 90 bp GAGGAGGAGGTAGGAGGGCCAAGAAGGACCAGAGAGTCTCCACCTTGGCTTAGCAAAGAGTCGAATTTCTaGATCCTCCATGAGGGCGGT +
Preference number: 4 (lower is better)
Translates to: EEEVGGPRRTRESPPWLSKESNF*ILHEGG
Trigger: ACCGCCCTCATGGAGGATGCAGAAATTCGACTCTTT...GCTAAGCCAAGGTGGAGACTCTCTGGTCCTTCTTGGCCCTCCTACCTCCTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR GCA 90 bp AACCCAAAGGGGTCTCCATGGCTCCTCCCAAGCCACAAGCGTTGCCAGGTGGTGAGATGGTCTCTCCAATaGTCCTCCTCTTGGATAAAC +
Preference number: 4 (lower is better)
Translates to: NPKGSPWLLPSHKRCQVVRWSLQ*SSSWIN
Trigger: GTTTATCCAAGAGGAGGAGCATTGGAGAGACCATCT...CACCACCTGGCAACGCTTGTGGCTTGGGAGGAGCCATGGAGACCCCTTTGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR GCA 90 bp CTCAACCCAGAAGCTCCAGGAACACCTTGGGACCCTCAGAAGAAAGACATCAAAGAGGTTCAGGTAGGCTaGGCCCAGAGCATAGAGGGC +
Preference number: 4 (lower is better)
Translates to: LNPEAPGTPWDPQKKDIKEVQVG*AQSIEG
Trigger: GCCCTCTATGCTCTGGGCGCAGCCTACCTGAACCTC...TTTGATGTCTTTCTTCTGAGGGTCCCAAGGTGTTCCTGGAGCTTCTGGGTTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR GCA 90 bp GAACCCAACTCTGAAAAACGTCCAGCAGACAGGACTGTGGGAGGCCAACACAAGCACCCCATGATTCTCTaGCCCTGGCTGACACAAGAG +
Preference number: 4 (lower is better)
Translates to: EPNSEKRPADRTVGGQHKHPMIL*PWLTQE
Trigger: CTCTTGTGTCAGCCAGGGGCAGAGAATCATGGGGTG...CTTGTGTTGGCCTCCCACAGTCCTGTCTGCTGGACGTTTTTCAGAGTTGGGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR GCA 90 bp AACATGAACAGACAACTGGGAGATGAGCAAGAGAGTGAGAGACACAGCAGGGACCTGCATCCTGCTTCCTaGCCTTTGCTGTCCCCCGAC +
Preference number: 4 (lower is better)
Translates to: NMNRQLGDEQESERHSRDLHPAS*PLLSPD
Trigger: GTCGGGGGACAGCAAAGGGCAGGAAGCAGGATGCAG...GTCCCTGCTGTGTCTCTCACTCTCTTGCTCATCTCCCAGTTGTCTGTTCATGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR GCA 90 bp AGAGGAATTGGGAAAAATAGACTCACTTCTGCAGGGCACTCTCTGTCACCAGGTCACAGGCCCACCTCCTaGCAGCCCTGCATCCTGCTT +
Preference number: 4 (lower is better)
Translates to: RGIGKNRLTSAGHSLSPGHRPTS*QPCILL
Trigger: AAGCAGGATGCAGGGCTGGCAGGAGGTGGGCCTGTG...ACCTGGTGACAGAGAGTGCCCTGCAGAAGTGAGTCTATTTTTCCCAATTCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR CCA 90 bp GAGGAGGAGGTAGGAGGGCCAAGAAGGACCAGAGAGTCTCCACCTTGGCTTAGCTCATCATGGCTCGAGTaGCACATTTCACTGAATCGG +
Preference number: 4 (lower is better)
Translates to: EEEVGGPRRTRESPPWLSSSWLE*HISLNR
Trigger: CCGATTCAGTGAAATGTGCCACTCGAGCCATGATGA...GCTAAGCCAAGGTGGAGACTCTCTGGTCCTTCTTGGCCCTCCTACCTCCTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR CCA 90 bp AGACGAGGAGGAGGTAGGAGGGCCAAGAAGGACCAGAGAGTCTCCACCTTGGCTGTGGGTCCCAGATATTaGCCTGCAGTTCATCATTCA +
Preference number: 4 (lower is better)
Translates to: RRGGGRRAKKDQRVSTLAVGPRY*PAVHHS
Trigger: TGAATGATGAACTGCAGGCCAATATCTGGGACCCAC...AGCCAAGGTGGAGACTCTCTGGTCCTTCTTGGCCCTCCTACCTCCTCCTCGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR CCA 90 bp AGACGAGGAGGAGGTAGGAGGGCCAAGAAGGACCAGAGAGTCTCCACCTTGGCTGGATGGCAAACACCTTaGGTTCCCAAAGAGAATGGT +
Preference number: 4 (lower is better)
Translates to: RRGGGRRAKKDQRVSTLAGWQTP*VPKENG
Trigger: ACCATTCTCTTTGGGAACCCAAGGTGTTTGCCATCC...AGCCAAGGTGGAGACTCTCTGGTCCTTCTTGGCCCTCCTACCTCCTCCTCGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR CCA 90 bp CTCAACCCAGAAGCTCCAGGAACACCTTGGGACCCTCAGAAGAAAGACATCAAATGGCCCAGGAGCTGCTaGATGACCAGGTGTGAGTGC +
Preference number: 4 (lower is better)
Translates to: LNPEAPGTPWDPQKKDIKWPRSC*MTRCEC
Trigger: GCACTCACACCTGGTCATCCAGCAGCTCCTGGGCCA...TTTGATGTCTTTCTTCTGAGGGTCCCAAGGTGTTCCTGGAGCTTCTGGGTTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CCA 90 bp ATCTATGACGCATACGTGGGGAGAGTCAGTACAAGTGTGGAATTACTCGAGAAACAGCGCTGCGGCTGTTaGCGTCCAGGTGGCCCAGGA +
Preference number: 4 (lower is better)
Translates to: IYDAYVGRVSTSVELLEKQRCGC*RPGGPG
Trigger: TCCTGGGCCACCTGGACGCCAACAGCCGCAGCGCTG...TTTCTCGAGTAATTCCACACTTGTACTGACTCTCCCCACGTATGCGTCATAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CCA 90 bp TTAGGGCAGGAAATGACTCTGTATGGTACTCTGGTGGGGGATGCATGTCATTACAGGTGGGCAGCGTGCTaGCAAAGGAGCCCACGGTCT +
Preference number: 4 (lower is better)
Translates to: LGQEMTLYGTLVGDACHYRWAAC*QRSPRS
Trigger: AGACCGTGGGCTCCTTTGCCAGCACGCTGCCCACCT...GTAATGACATGCATCCCCCACCAGAGTACCATACAGAGTCATTTCCTGCCCTAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CCA 90 bp GTCAGGCTGGGAGCCTTTTCCATAGGAGGTGATGTGGGCAAATCTTGGGGACCCGATTCTGAGACAGCCTaGGCCTCTCCACAAACACAT +
Preference number: 4 (lower is better)
Translates to: VRLGAFSIGGDVGKSWGPDSETA*ASPQTH
Trigger: ATGTGTTTGTGGAGAGGCCCAGGCTGTCTCAGAATC...GGGTCCCCAAGATTTGCCCACATCACCTCCTATGGAAAAGGCTCCCAGCCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CCA 90 bp CCATCCAGCTCCGTCCTCTGGGGAGGACATGCCCTTCACTCAAAACACCAAGTATTTCATAGACGGGGATaGAGTGGTTCTGCGGCTGAC +
Preference number: 4 (lower is better)
Translates to: PSSSVLWGGHALHSKHQVFHRRG*SGSAAD
Trigger: GTCAGCCGCAGAACCACTCCATCCCCGTCTATGAAA...TACTTGGTGTTTTGAGTGAAGGGCATGTCCTCCCCAGAGGACGGAGCTGGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CCA 90 bp GTAGTTCCCCTCCAAGATTATCTTGCTCTGCCTTTCCTCAACCCAGAAGCTCCACCAGCCTTTTGTACCTaGGGCGTAGGGCACCACAGC +
Preference number: 4 (lower is better)
Translates to: VVPLQDYLALPFLNPEAPPAFCT*GVGHHS
Trigger: GCTGTGGTGCCCTACGCCCCAGGTACAAAAGGCTGG...TGGAGCTTCTGGGTTGAGGAAAGGCAGAGCAAGATAATCTTGGAGGGGAACTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CCA 90 bp CTTGCTCTGCCTTTCCTCAACCCAGAAGCTCCAGGAACACCTTGGGACCCTCAGGTCTCTATCACCTCATaGATGTGCTGGCAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: LALPFLNPEAPGTPWDPQVSITS*MCWQKA
Trigger: TGCCTTCTGCCAGCACATCCATGAGGTGATAGAGAC...CTGAGGGTCCCAAGGTGTTCCTGGAGCTTCTGGGTTGAGGAAAGGCAGAGCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CCA 90 bp GTCAGGCTGGGAGCCTTTTCCATAGGAGGTGATGTGGGCAAATCTTGGGGACCCGTCTCTATCACCTCATaGATGTGCTGGCAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: VRLGAFSIGGDVGKSWGPVSITS*MCWQKA
Trigger: TGCCTTCTGCCAGCACATCCATGAGGTGATAGAGAC...GGGTCCCCAAGATTTGCCCACATCACCTCCTATGGAAAAGGCTCCCAGCCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CCA 90 bp AGACGAGGAGGAGGTAGGAGGGCCAAGAAGGACCAGAGAGTCTCCACCTTGGCTATGATTCTCTGCCCCTaGCTGACACAAGAGAAGACA +
Preference number: 4 (lower is better)
Translates to: RRGGGRRAKKDQRVSTLAMILCP*LTQEKT
Trigger: TGTCTTCTCTTGTGTCAGCCAGGGGCAGAGAATCAT...AGCCAAGGTGGAGACTCTCTGGTCCTTCTTGGCCCTCCTACCTCCTCCTCGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CCA 90 bp CCATCCAGCTCCGTCCTCTGGGGAGGACATGCCCTTCACTCAAAACACCAAGTATATGAACAAAGGAGGTaGGAAGCTGCTGCAGGGACC +
Preference number: 4 (lower is better)
Translates to: PSSSVLWGGHALHSKHQVYEQRR*EAAAGT
Trigger: GGTCCCTGCAGCAGCTTCCCACCTCCTTTGTTCATA...TACTTGGTGTTTTGAGTGAAGGGCATGTCCTCCCCAGAGGACGGAGCTGGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CCA 90 bp ACAGGTGAGATGCTGATTGGTGAGACCTCCCTCAGGGAAGACGAGGAGGAGGTATATGAACAAAGGAGGTaGGAAGCTGCTGCAGGGACC +
Preference number: 4 (lower is better)
Translates to: TGEMLIGETSLREDEEEVYEQRR*EAAAGT
Trigger: GGTCCCTGCAGCAGCTTCCCACCTCCTTTGTTCATA...TACCTCCTCCTCGTCTTCCCTGAGGGAGGTCTCACCAATCAGCATCTCACCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CCA 90 bp CTTTCCCACAGGACCCCAACCGGCCAGCTGCCATTTTCTGGTCATGAAGAGGAAGATGTGGGCAAATCTTaGGGACCCTGTAGTTCCCCT +
Preference number: 4 (lower is better)
Translates to: LSHRTPTGQLPFSGHEEEDVGKS*GPCSSP
Trigger: AGGGGAACTACAGGGTCCCCAAGATTTGCCCACATC...TTCCTCTTCATGACCAGAAAATGGCAGCTGGCCGGTTGGGGTCCTGTGGGAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR CCA 90 bp AGACGAGGAGGAGGTAGGAGGGCCAAGAAGGACCAGAGAGTCTCCACCTTGGCTAGGAAAGGGCAATTTTaGACCACATGGCACTGCCAT +
Preference number: 4 (lower is better)
Translates to: RRGGGRRAKKDQRVSTLARKGQF*TTWHCH
Trigger: ATGGCAGTGCCATGTGGTCCAAAATTGCCCTTTCCT...AGCCAAGGTGGAGACTCTCTGGTCCTTCTTGGCCCTCCTACCTCCTCCTCGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR CCA 90 bp TCCAAGATTATCTTGCTCTGCCTTTCCTCAACCCAGAAGCTCCAGGAACACCTTCGTGCACACCACACGTaGGGCTATGAGCTGAGGCCG +
Preference number: 4 (lower is better)
Translates to: SKIILLCLSSTQKLQEHLRAHHT*GYELRP
Trigger: CGGCCTCAGCTCATAGCCCCACGTGTGGTGTGCACG...AAGGTGTTCCTGGAGCTTCTGGGTTGAGGAAAGGCAGAGCAAGATAATCTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR CCA 90 bp CCTGAGAGACACCCCATGATTCTCTGCCCCTGGCTGACACAAGAGAAGACAAAGAGGAGCCCAGAGGTCTaGCCTGAGCTGTTCAGAAGA +
Preference number: 4 (lower is better)
Translates to: PERHPMILCPWLTQEKTKRSPEV*PELFRR
Trigger: TCTTCTGAACAGCTCAGGCCAGACCTCTGGGCTCCT...CTTTGTCTTCTCTTGTGTCAGCCAGGGGCAGAGAATCATGGGGTGTCTCTCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR CCA 90 bp TCCATGTCTATATCAGCCCTAATGGGCAGAGAGGCTGGGGAATGCCAGCCTGTCAATGCACCACTCTGCTaGGGGATATGGATAGGAGGG +
Preference number: 4 (lower is better)
Translates to: SMSISALMGREAGECQPVNAPLC*GIWIGG
Trigger: CCCTCCTATCCATATCCCCCAGCAGAGTGGTGCATT...GACAGGCTGGCATTCCCCAGCCTCTCTGCCCATTAGGGCTGATATAGACATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CCA 90 bp GGAGAGAGCAGCCAACTCACCCCGATGCCTAACGCATTGGAGGTTCCCAGTCCTAGGGTGGTTCAGATGTaGCATTCTGCACTAGCAAAG +
Preference number: 4 (lower is better)
Translates to: GESSQLTPMPNALEVPSPRVVQM*HSALAK
Trigger: CTTTGCTAGTGCAGAATGCCACATCTGAACCACCCT...AGGACTGGGAACCTCCAATGCGTTAGGCATCGGGGTGAGTTGGCTGCTCTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR CAA 72 bp CACTTCACTCCTCAATTCCCGAGGGTCTCTTACCTCTaGGGAAGGGAGAATCGCCACTATGGGGAGAGAGCA +
Preference number: 4 (lower is better)
Translates to: HFTPQFPRVSYL*GRENRHYGERA
Trigger: TGCTCTCTCCCCATAGTGGCGATTCTCCCTTCCCAAGAGGTAAGAGACCCTCGGGAATTGAGGAGTGAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR TCA 90 bp AGACGAGGAGGAGGTAGGAGGGCCAAGAAGGACCAGAGAGTCTCCACCTTGGCTAGTGGCACATTTCACTaGATCGGGACACAAAGAAGT +
Preference number: 4 (lower is better)
Translates to: RRGGGRRAKKDQRVSTLASGTFH*IGTQRS
Trigger: ACTTCTTTGTGTCCCGATTCAGTGAAATGTGCCACT...AGCCAAGGTGGAGACTCTCTGGTCCTTCTTGGCCCTCCTACCTCCTCCTCGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR TCA 90 bp GAGGAGGAGGTAGGAGGGCCAAGAAGGACCAGAGAGTCTCCACCTTGGCTTAGCCAGGCCTTTGATGCCTaGCATTCGAATTTTGGTCTT +
Preference number: 4 (lower is better)
Translates to: EEEVGGPRRTRESPPWLSQAFDA*HSNFGL
Trigger: AAGACCAAAATTCGAATGTCAGGCATCAAAGGCCTG...GCTAAGCCAAGGTGGAGACTCTCTGGTCCTTCTTGGCCCTCCTACCTCCTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR TCA 90 bp TCTAGAACACCCAGGGCAAAGGGCGGCACATCTATGACACTTGTGCTTCTTCAAACCCCATCAAGATTCTaGGACAGCCTGGGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: SRTPRAKGGTSMTLVLLQTPSRF*DSLGLS
Trigger: GGAGAGGCCCAGGCTGTCTCAGAATCTTGATGGGGT...TTGAAGAAGCACAAGTGTCATAGATGTGCCGCCCTTTGCCCTGGGTGTTCTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR TCA 90 bp AGTGATGGAAAGGAAAAGCTGCCTGGGACCGGTGGAGAGGAAACAGCAGAATCTGCTTGGCCACCATCTTaGGGAAGCTCTCCACGAAGA +
Preference number: 4 (lower is better)
Translates to: SDGKEKLPGTGGEETAESAWPPS*GSSPRR
Trigger: TCTTCGTGGAGAGCTTCCTCAAGATGGTGGCCAAGC...AGATTCTGCTGTTTCCTCTCCACCGGTCCCAGGCAGCTTTTCCTTTCCATCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR TCA 90 bp GAGAGAGAACCCAACTCTGAAAAACGTCCAGCAGACAGGACTGTGGGAGGCCAAGCAAGTTCTCCTCATTaGCTTGGGCCACGTCCTGAA +
Preference number: 4 (lower is better)
Translates to: EREPNSEKRPADRTVGGQASSPH*LGPRPE
Trigger: TTCAGGACGTGGCCCAAGTCAATGAGGAGAACTTGC...TTGGCCTCCCACAGTCCTGTCTGCTGGACGTTTTTCAGAGTTGGGTTCTCTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR TCA 90 bp CAAGGCGCTGGGGACTCCATGGCAAGGAAAACAGAGGGAGCCTCGGGACCACACGCCATTTTCTGGTCATaGAGAGGAATTGGGAAAAAT +
Preference number: 4 (lower is better)
Translates to: QGAGDSMARKTEGASGPHAIFWS*RGIGKN
Trigger: ATTTTTCCCAATTCCTCTTCATGACCAGAAAATGGC...GTGTGGTCCCGAGGCTCCCTCTGTTTTCCTTGCCATGGAGTCCCCAGCGCCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR TCA 90 bp ACTTATCCTCTGTACGTCCATCCATTCATCCACTGTCAGCACCGAGCAACATTGCCCACCTCAGCATCCTaGGTACCTGGGACCACAGGT +
Preference number: 4 (lower is better)
Translates to: TYPLYVHPFIHCQHRATLPTSAS*VPGTTG
Trigger: ACCTGTGGTCCCAGGTACTCAGGATGCTGAGGTGGG...CAATGTTGCTCGGTGCTGACAGTGGATGAATGGATGGACGTACAGAGGATAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR GCA 90 bp TTTACTTGTCCAATTAGCCCAAGTCAGAGCTTCCTTCCGTGGGAAGGTTCTGGATATTCTCCCCCGTCCTaGCTGTGTCCACCGCCTGGT +
Preference number: 4 (lower is better)
Translates to: FTCPISPSQSFLPWEGSGYSPPS*LCPPPG
Trigger: ACCAGGCGGTGGACACAGGCAGGACGGGGGAGAATA...TCCAGAACCTTCCCACGGAAGGAAGCTCTGACTTGGGCTAATTGGACAAGTAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR GCA 90 bp GCTCTGCCTTTCCTCAACCCAGAAGCTCCAGGAACACCTTGGGACCCTCAGAAGAAACCTGTGGATACCTaGAGGAGGGATTTTAGCAGC +
Preference number: 4 (lower is better)
Translates to: ALPFLNPEAPGTPWDPQKKPVDT*RRDFSS
Trigger: GCTGCTAAAATCCCTCCTGCAGGTATCCACAGGTTT...CTTCTGAGGGTCCCAAGGTGTTCCTGGAGCTTCTGGGTTGAGGAAAGGCAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR GCA 90 bp CACCTTGGCTTAGCCTGGGAGGCGCTGCCATCTAAGGTGATGTTTTCTCAGAGAGATTCTACCTCCACCTaGAGGGAGATGGTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: HLGLAWEALPSKVMFSQRDSTST*REMVSP
Trigger: TGGAGAGACCATCTCCCTGCAGGTGGAGGTAGAATC...TCTCTGAGAAAACATCACCTTAGATGGCAGCGCCTCCCAGGCTAAGCCAAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR GCA 90 bp ACAGGTGAGATGCTGATTGGTGAGACCTCCCTCAGGGAAGACGAGGAGGAGGTAAATCTCCTCGAAGGGTaGCTTCTGGAACTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: TGEMLIGETSLREDEEEVNLLEG*LLELLH
Trigger: GTGGAGAAGTTCCAGAAGGCACCCTTCGAGGAGATT...TACCTCCTCCTCGTCTTCCCTGAGGGAGGTCTCACCAATCAGCATCTCACCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR GCA 90 bp ACTTATCCTCTGTACGTCCATCCATTCATCCACTGTCAGCACCGAGCAACATTGGAGGTTCAGGTAGGCTaGGCCCAGAGCATAGAGGGC +
Preference number: 4 (lower is better)
Translates to: TYPLYVHPFIHCQHRATLEVQVG*AQSIEG
Trigger: GCCCTCTATGCTCTGGGCGCAGCCTACCTGAACCTC...CAATGTTGCTCGGTGCTGACAGTGGATGAATGGATGGACGTACAGAGGATAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR GCA 90 bp TCCAAGATTATCTTGCTCTGCCTTTCCTCAACCCAGAAGCTCCAGGAACACCTTGAGGTTCAGGTAGGCTaGGCCCAGAGCATAGAGGGC +
Preference number: 4 (lower is better)
Translates to: SKIILLCLSSTQKLQEHLEVQVG*AQSIEG
Trigger: GCCCTCTATGCTCTGGGCGCAGCCTACCTGAACCTC...AAGGTGTTCCTGGAGCTTCTGGGTTGAGGAAAGGCAGAGCAAGATAATCTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR GCA 90 bp GAACCCAACTCTGAAAAACGTCCAGCAGACAGGACTGTGGGAGGCCAACACAAGATCACCTCATGGATGTaGTGGCAGAAGGCAGGCACT +
Preference number: 4 (lower is better)
Translates to: EPNSEKRPADRTVGGQHKITSWM*WQKAGT
Trigger: AGTGCCTGCCTTCTGCCAGCACATCCATGAGGTGAT...CTTGTGTTGGCCTCCCACAGTCCTGTCTGCTGGACGTTTTTCAGAGTTGGGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR GCA 90 bp GAACCCAACTCTGAAAAACGTCCAGCAGACAGGACTGTGGGAGGCCAACACAAGCCTCTGGGGAGGACATaGCCTTCACTCAAAACACCA +
Preference number: 4 (lower is better)
Translates to: EPNSEKRPADRTVGGQHKPLGRT*PSLKTP
Trigger: TGGTGTTTTGAGTGAAGGGCATGTCCTCCCCAGAGG...CTTGTGTTGGCCTCCCACAGTCCTGTCTGCTGGACGTTTTTCAGAGTTGGGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR GCA 90 bp AGACGAGGAGGAGGTAGGAGGGCCAAGAAGGACCAGAGAGTCTCCACCTTGGCTTCTCAAATACATTCCTaGCTACTCAGTGCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: RRGGGRRAKKDQRVSTLASQIHS*LLSAVS
Trigger: GCTGACAGCACTGAGTAGGCAGGAATGTATTTGAGA...AGCCAAGGTGGAGACTCTCTGGTCCTTCTTGGCCCTCCTACCTCCTCCTCGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR GCA 90 bp AGAGGAATTGGGAAAAATAGACTCACTTCTGCAGGGCACTCTCTGTCACCAGGTGAAGTGGGCCTGGCCTaGCCTGATGATGCCATCTCC +
Preference number: 4 (lower is better)
Translates to: RGIGKNRLTSAGHSLSPGEVGLA*PDDAIS
Trigger: GGAGATGGCATCATCAGGGCAGGCCAGGCCCACTTC...ACCTGGTGACAGAGAGTGCCCTGCAGAAGTGAGTCTATTTTTCCCAATTCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR CCA 90 bp GCTCTGCCTTTCCTCAACCCAGAAGCTCCAGGAACACCTTGGGACCCTCAGAAGGTGGGTCCCAGATATTaGCCTGCAGTTCATCATTCA +
Preference number: 4 (lower is better)
Translates to: ALPFLNPEAPGTPWDPQKVGPRY*PAVHHS
Trigger: TGAATGATGAACTGCAGGCCAATATCTGGGACCCAC...CTTCTGAGGGTCCCAAGGTGTTCCTGGAGCTTCTGGGTTGAGGAAAGGCAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CCA 90 bp CCATCCAGCTCCGTCCTCTGGGGAGGACATGCCCTTCACTCAAAACACCAAGTACTTATCCATGTGCTGTaGGTCCCAGATATTGGCCTG +
Preference number: 4 (lower is better)
Translates to: PSSSVLWGGHALHSKHQVLIHVL*VPDIGL
Trigger: CAGGCCAATATCTGGGACCCACAGCACATGGATAAG...TACTTGGTGTTTTGAGTGAAGGGCATGTCCTCCCCAGAGGACGGAGCTGGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CCA 90 bp GAGGAGGAGGTAGGAGGGCCAAGAAGGACCAGAGAGTCTCCACCTTGGCTTAGCATCATGTTGTTGCACTaGAAACCTGTGGATACCTGC +
Preference number: 4 (lower is better)
Translates to: EEEVGGPRRTRESPPWLSIMLLH*KPVDTC
Trigger: GCAGGTATCCACAGGTTTCCAGTGCAACAACATGAT...GCTAAGCCAAGGTGGAGACTCTCTGGTCCTTCTTGGCCCTCCTACCTCCTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR CCA 90 bp CACCTTGGCTTAGCCTGGGAGGCGCTGCCATCTAAGGTGATGTTTTCTCAGAGACTCGGGGAGCATGTATaGAGCCTCTTTCTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: HLGLAWEALPSKVMFSQRLGEHV*SLFLPG
Trigger: ACCAGGAAGAAAGAGGCTCCATACATGCTCCCCGAG...TCTCTGAGAAAACATCACCTTAGATGGCAGCGCCTCCCAGGCTAAGCCAAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR CCA 90 bp ACAGGTGAGATGCTGATTGGTGAGACCTCCCTCAGGGAAGACGAGGAGGAGGTATCACTGATCTTGCTCTaGCGGAAGAGGAGCTCAATG +
Preference number: 4 (lower is better)
Translates to: TGEMLIGETSLREDEEEVSLILL*RKRSSM
Trigger: CATTGAGCTCCTCTTCCGCCAGAGCAAGATCAGTGA...TACCTCCTCCTCGTCTTCCCTGAGGGAGGTCTCACCAATCAGCATCTCACCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR CCA 90 bp CTCAACCCAGAAGCTCCAGGAACACCTTGGGACCCTCAGAAGAAAGACATCAAACCACCTGCAGGGAGATaGTCTCTCCAATGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LNPEAPGTPWDPQKKDIKPPAGR*SLQCSS
Trigger: GGAGGAGCATTGGAGAGACCATCTCCCTGCAGGTGG...TTTGATGTCTTTCTTCTGAGGGTCCCAAGGTGTTCCTGGAGCTTCTGGGTTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CCA 90 bp GAGGAGGAGGTAGGAGGGCCAAGAAGGACCAGAGAGTCTCCACCTTGGCTTAGCCTACGCTGTCCACAATaGCTTTCTTCAGTGTCTCAT +
Preference number: 4 (lower is better)
Translates to: EEEVGGPRRTRESPPWLSLRCPQ*LSSVSH
Trigger: ATGAGACACTGAAGAAAGCCATTGTGGACAGCGTAG...GCTAAGCCAAGGTGGAGACTCTCTGGTCCTTCTTGGCCCTCCTACCTCCTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR CCA 90 bp AGACGAGGAGGAGGTAGGAGGGCCAAGAAGGACCAGAGAGTCTCCACCTTGGCTAGGAGCTCAGGCTCTTaGAATTCAGTATACACACAG +
Preference number: 4 (lower is better)
Translates to: RRGGGRRAKKDQRVSTLARSSGS*NSVYTQ
Trigger: CTGTGTGTATACTGAATTCCAAGAGCCTGAGCTCCT...AGCCAAGGTGGAGACTCTCTGGTCCTTCTTGGCCCTCCTACCTCCTCCTCGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR CCA 90 bp GAGGAGGAGGTAGGAGGGCCAAGAAGGACCAGAGAGTCTCCACCTTGGCTTAGCAGGAGCTCAGGCTCTTaGAATTCAGTATACACACAG +
Preference number: 4 (lower is better)
Translates to: EEEVGGPRRTRESPPWLSRSSGS*NSVYTQ
Trigger: CTGTGTGTATACTGAATTCCAAGAGCCTGAGCTCCT...GCTAAGCCAAGGTGGAGACTCTCTGGTCCTTCTTGGCCCTCCTACCTCCTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR CCA 90 bp AAATCTTGGGGACCCTGTAGTTCCCCTCCAAGATTATCTTGCTCTGCCTTTCCTTCCAGCTCCGTCCTCTaGGGAGGACATGCCCTTCAC +
Preference number: 4 (lower is better)
Translates to: KSWGPCSSPPRLSCSAFPSSSVL*GGHALH
Trigger: GTGAAGGGCATGTCCTCCCCAGAGGACGGAGCTGGA...AGGAAAGGCAGAGCAAGATAATCTTGGAGGGGAACTACAGGGTCCCCAAGATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CCA 90 bp GATGTGGGCAAATCTTGGGGACCCTGTAGTTCCCCTCCAAGATTATCTTGCTCTCAGCAGACAGGACTGTaGGAGGCCAACACAAGCTCC +
Preference number: 4 (lower is better)
Translates to: DVGKSWGPCSSPPRLSCSQQTGL*EANTSS
Trigger: GGAGCTTGTGTTGGCCTCCCACAGTCCTGTCTGCTG...AGAGCAAGATAATCTTGGAGGGGAACTACAGGGTCCCCAAGATTTGCCCACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CCA 90 bp GATGTGGGCAAATCTTGGGGACCCTGTAGTTCCCCTCCAAGATTATCTTGCTCTCCAAAGGGGTCTCCATaGCTCCTCCCAAGCCACAAG +
Preference number: 4 (lower is better)
Translates to: DVGKSWGPCSSPPRLSCSPKGSP*LLPSHK
Trigger: CTTGTGGCTTGGGAGGAGCCATGGAGACCCCTTTGG...AGAGCAAGATAATCTTGGAGGGGAACTACAGGGTCCCCAAGATTTGCCCACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR CCA 90 bp GACCGGTGGAGAGGAAACAGCAGAATCTATGCAGAATGGGAACCTGCACCTTTTGCTGCCTGGGACCGGTaGAGAGGAAACAGCAGAATC +
Preference number: 4 (lower is better)
Translates to: DRWRGNSRIYAEWEPAPFAAWDR*RGNSRI
Trigger: GATTCTGCTGTTTCCTCTCCACCGGTCCCAGGCAGC...AAAAGGTGCAGGTTCCCATTCTGCATAGATTCTGCTGTTTCCTCTCCACCGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR CCA 90 bp CCAAGATTATCTTGCTCTGCCTTTCCTCAACCCAGAAGCTCCAGGAACACCTTGGCGCTGGGGACTCCATaGCAAGGAAAACAGAGGGAG +
Preference number: 4 (lower is better)
Translates to: PRLSCSAFPQPRSSRNTLALGTP*QGKQRE
Trigger: CTCCCTCTGTTTTCCTTGCCATGGAGTCCCCAGCGC...CAAGGTGTTCCTGGAGCTTCTGGGTTGAGGAAAGGCAGAGCAAGATAATCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR CCA 90 bp TCCAAGATTATCTTGCTCTGCCTTTCCTCAACCCAGAAGCTCCAGGAACACCTTCACAGGAAGTGGGCCTaGCCTGCCCTGATGATGCCA +
Preference number: 4 (lower is better)
Translates to: SKIILLCLSSTQKLQEHLHRKWA*PALMMP
Trigger: TGGCATCATCAGGGCAGGCCAGGCCCACTTCCTGTG...AAGGTGTTCCTGGAGCTTCTGGGTTGAGGAAAGGCAGAGCAAGATAATCTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR CCA 90 bp GAGAGAGAACCCAACTCTGAAAAACGTCCAGCAGACAGGACTGTGGGAGGCCAAAGCCAGGCTCTAGGATaGGCCCATCATGACTATCCT +
Preference number: 4 (lower is better)
Translates to: EREPNSEKRPADRTVGGQSQALG*AHHDYP
Trigger: AGGATAGTCATGATGGGCCCATCCTAGAGCCTGGCT...TTGGCCTCCCACAGTCCTGTCTGCTGGACGTTTTTCAGAGTTGGGTTCTCTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR CCA 90 bp AGATTTGGGGTAAGGGGCCACTCTAACCAGAAGATTTCTAGGGTTAATGGGATGGCTTGGGCGGCCCCATaGTCCCCTGAAGTACAGGAG +
Preference number: 4 (lower is better)
Translates to: RFGVRGHSNQKISRVNGMAWAAP*SPEVQE
Trigger: CTCCTGTACTTCAGGGGACCATGGGGCCGCCCAAGC...CATCCCATTAACCCTAGAAATCTTCTGGTTAGAGTGGCCCCTTACCCCAAATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR CCA 90 bp GTGGGGAAAAATGAAATGGCAGAGCCCAGACTATGCATGGCTGGGAATGCCAGGCCACTAGTGAGGAGGTaGCTCTGTAGCTGTGTAAGC +
Preference number: 4 (lower is better)
Translates to: VGKNEMAEPRLCMAGNARPLVRR*LCSCVS
Trigger: GCTTACACAGCTACAGAGCCACCTCCTCACTAGTGG...CCTGGCATTCCCAGCCATGCATAGTCTGGGCTCTGCCATTTCATTTTTCCCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR TCA 90 bp CCTGAGAGACACCCCATGATTCTCTGCCCCTGGCTGACACAAGAGAAGACAAAGCCCCTTGCAGGCCTTTaGTGCCTGACATTCGAATTT +
Preference number: 4 (lower is better)
Translates to: PERHPMILCPWLTQEKTKPLAGL*CLTFEF
Trigger: AAATTCGAATGTCAGGCATCAAAGGCCTGCAAGGGG...CTTTGTCTTCTCTTGTGTCAGCCAGGGGCAGAGAATCATGGGGTGTCTCTCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR TCA 90 bp GAGGAGGAGGTAGGAGGGCCAAGAAGGACCAGAGAGTCTCCACCTTGGCTTAGCCTACATGCTGTAGATTaGAAAGCAGTGATGGAACGA +
Preference number: 4 (lower is better)
Translates to: EEEVGGPRRTRESPPWLSLHAVD*KAVMER
Trigger: TCGTTCCATCACTGCTTTTCAATCTACAGCATGTAG...GCTAAGCCAAGGTGGAGACTCTCTGGTCCTTCTTGGCCCTCCTACCTCCTCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR TCA 90 bp TGGCCTATTTGGCCAGAATCCAGGTTCTACTCCATGTCAGCAGACAACCCAACAGCCTCAGCAGCGTGTTaGACATCTCCAGTACTGTGG +
Preference number: 4 (lower is better)
Translates to: WPIWPESRFYSMSADNPTASAAC*TSPVLW
Trigger: CCACAGTACTGGAGATGTTCAACACGCTGCTGAGGC...TGTTGGGTTGTCTGCTGACATGGAGTAGAACCTGGATTCTGGCCAAATAGGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR TCA 90 bp GAACCCAACTCTGAAAAACGTCCAGCAGACAGGACTGTGGGAGGCCAACACAAGGGAAGAGGAGCTCAATaGCCACCCCATCAAGATTCT +
Preference number: 4 (lower is better)
Translates to: EPNSEKRPADRTVGGQHKGRGAQ*PPHQDS
Trigger: AGAATCTTGATGGGGTGGTCATTGAGCTCCTCTTCC...CTTGTGTTGGCCTCCCACAGTCCTGTCTGCTGGACGTTTTTCAGAGTTGGGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR TCA 90 bp TCTAGAACACCCAGGGCAAAGGGCGGCACATCTATGACACTTGTGCTTCTTCAACTCCCAGGACTTCACTaGTCTTGCTCTGGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: SRTPRAKGGTSMTLVLLQLPGLH*SCSGGR
Trigger: TCTTCCGCCAGAGCAAGATCAGTGAAGTCCTGGGAG...TTGAAGAAGCACAAGTGTCATAGATGTGCCGCCCTTTGCCCTGGGTGTTCTAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR TCA 90 bp GCTCTGCCTTTCCTCAACCCAGAAGCTCCAGGAACACCTTGGGACCCTCAGAAGTTTCAAAGATCTGATTaGGTTTGCTCTGGAGCAGCG +
Preference number: 4 (lower is better)
Translates to: ALPFLNPEAPGTPWDPQKFQRSD*VCSGAA
Trigger: CGCTGCTCCAGAGCAAACTCAATCAGATCTTTGAAA...CTTCTGAGGGTCCCAAGGTGTTCCTGGAGCTTCTGGGTTGAGGAAAGGCAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR TCA 90 bp TCCAAGATTATCTTGCTCTGCCTTTCCTCAACCCAGAAGCTCCAGGAACACCTTCAGACCCCATCTCCTTaGGGAGCTCAGGCTCTTGGA +
Preference number: 4 (lower is better)
Translates to: SKIILLCLSSTQKLQEHLQTPSP*GAQALG
Trigger: TCCAAGAGCCTGAGCTCCTCAAGGAGATGGGGTCTG...AAGGTGTTCCTGGAGCTTCTGGGTTGAGGAAAGGCAGAGCAAGATAATCTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR TCA 90 bp GTAGTTCCCCTCCAAGATTATCTTGCTCTGCCTTTCCTCAACCCAGAAGCTCCAGCACAGGTGAGATGCTaGTTGGTGAGACCTCCCTCA +
Preference number: 4 (lower is better)
Translates to: VVPLQDYLALPFLNPEAPAQVRC*LVRPPS
Trigger: TGAGGGAGGTCTCACCAATCAGCATCTCACCTGTGC...TGGAGCTTCTGGGTTGAGGAAAGGCAGAGCAAGATAATCTTGGAGGGGAACTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR TCA 90 bp CATGATTCTCTGCCCCTGGCTGACACAAGAGAAGACAAAGAGGGCACAGGTGAGTTCTCTGCCCCTGGCTaGCACAAGAGAAGACAAAGA +
Preference number: 4 (lower is better)
Translates to: HDSLPLADTREDKEGTGEFSAPG*HKRRQR
Trigger: TCTTTGTCTTCTCTTGTGTCAGCCAGGGGCAGAGAA...CTCACCTGTGCCCTCTTTGTCTTCTCTTGTGTCAGCCAGGGGCAGAGAATCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR TCA 90 bp GAACCCAACTCTGAAAAACGTCCAGCAGACAGGACTGTGGGAGGCCAACACAAGGAGAGAACCCAACTCTaGAAAACGTCCAGCAGACAG +
Preference number: 4 (lower is better)
Translates to: EPNSEKRPADRTVGGQHKERTQL*KTSSRQ
Trigger: CTGTCTGCTGGACGTTTTTCAGAGTTGGGTTCTCTC...CTTGTGTTGGCCTCCCACAGTCCTGTCTGCTGGACGTTTTTCAGAGTTGGGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR TCA 90 bp GAGAGAGAACCCAACTCTGAAAAACGTCCAGCAGACAGGACTGTGGGAGGCCAAAGGGCGGCACATCTATaGCACTTGTGCTTCTTCAAG +
Preference number: 4 (lower is better)
Translates to: EREPNSEKRPADRTVGGQRAAHL*HLCFFK
Trigger: CTTGAAGAAGCACAAGTGTCATAGATGTGCCGCCCT...TTGGCCTCCCACAGTCCTGTCTGCTGGACGTTTTTCAGAGTTGGGTTCTCTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR TCA 90 bp GCATCTGGGGAAAGGCTTGATGTCAAAGCTGTCCTCCATGTCTATATCAGCCCTACTCTGGACTGGCACTaGTGGCTGAGAGTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: ASGERLDVKAVLHVYISPTLDWH*WLRVER
Trigger: TCTCTCCACTCTCAGCCATCAGTGCCAGTCCAGAGT...AGGGCTGATATAGACATGGAGGACAGCTTTGACATCAAGCCTTTCCCCAGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR TCA 90 bp GCACTAGCAAAGGCCTGGAGATGGCGGAGCGCAGCGTGGGAGAGATCGAGAGCAACCAGGATTCAGATTTaGCCAAACAAGCATTTATTC +
Preference number: 4 (lower is better)
Translates to: ALAKAWRWRSAAWERSRATRIQI*PNKHLF
Trigger: GAATAAATGCTTGTTTGGTCAAATCTGAATCCTGGT...TGCTCTCGATCTCTCCCACGCTGCGCTCCGCCATCTCCAGGCCTTTGCTAGTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR GCA 90 bp GAGGAGGAGGTAGGAGGGCCAAGAAGGACCAGAGAGTCTCCACCTTGGCTTAGCTCTGCCTCCTCTACATaGTGTAGATTGAAAAGCAGT +
Preference number: 4 (lower is better)
Translates to: EEEVGGPRRTRESPPWLSSASST*CRLKSS
Trigger: ACTGCTTTTCAATCTACAGCATGTAGAGGAGGCAGA...GCTAAGCCAAGGTGGAGACTCTCTGGTCCTTCTTGGCCCTCCTACCTCCTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR GCA 90 bp AGACGAGGAGGAGGTAGGAGGGCCAAGAAGGACCAGAGAGTCTCCACCTTGGCTTCTGCCTCCTCTACATaGTGTAGATTGAAAAGCAGT +
Preference number: 4 (lower is better)
Translates to: RRGGGRRAKKDQRVSTLASASST*CRLKSS
Trigger: ACTGCTTTTCAATCTACAGCATGTAGAGGAGGCAGA...AGCCAAGGTGGAGACTCTCTGGTCCTTCTTGGCCCTCCTACCTCCTCCTCGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR GCA 90 bp TCACCAACCAAGTCTCCATCCAGCTCCGTCCTCTGGGGAGGACATGCCCTTCACCTGACATCATGTTGTTaGACTGGAAACCTGTGGATA +
Preference number: 4 (lower is better)
Translates to: SPTKSPSSSVLWGGHALHLTSCC*TGNLWI
Trigger: TATCCACAGGTTTCCAGTGCAACAACATGATGTCAG...GTGAAGGGCATGTCCTCCCCAGAGGACGGAGCTGGATGGAGACTTGGTTGGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR GCA 90 bp CCATCCAGCTCCGTCCTCTGGGGAGGACATGCCCTTCACTCAAAACACCAAGTACGTTTGTTTCCTCCTTaGAGCTCAGGTAGATGTGTC +
Preference number: 4 (lower is better)
Translates to: PSSSVLWGGHALHSKHQVRLFPP*SSGRCV
Trigger: GACACATCTACCTGAGCTGCAAGGAGGAAACAAACG...TACTTGGTGTTTTGAGTGAAGGGCATGTCCTCCCCAGAGGACGGAGCTGGATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR GCA 90 bp GTCAGGCTGGGAGCCTTTTCCATAGGAGGTGATGTGGGCAAATCTTGGGGACCCAGATGGTCTCTCCAATaGTCCTCCTCTTGGATAAAC +
Preference number: 4 (lower is better)
Translates to: VRLGAFSIGGDVGKSWGPRWSLQ*SSSWIN
Trigger: GTTTATCCAAGAGGAGGAGCATTGGAGAGACCATCT...GGGTCCCCAAGATTTGCCCACATCACCTCCTATGGAAAAGGCTCCCAGCCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR GCA 90 bp GACCGGTGGAGAGGAAACAGCAGAATCTATGCAGAATGGGAACCTGCACCTTTTCAATCAGGCTCTCCCTaGACATCCGTGCACACCACA +
Preference number: 4 (lower is better)
Translates to: DRWRGNSRIYAEWEPAPFQSGSP*TSVHTT
Trigger: TGTGGTGTGCACGGATGTGCAGGGAGAGCCTGATTG...AAAAGGTGCAGGTTCCCATTCTGCATAGATTCTGCTGTTTCCTCTCCACCGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR GCA 90 bp GTAGTTCCCCTCCAAGATTATCTTGCTCTGCCTTTCCTCAACCCAGAAGCTCCAATGGAAAGGAAAAGCTaGCTGGGACCGGTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: VVPLQDYLALPFLNPEAPMERKS*LGPVER
Trigger: CCTCTCCACCGGTCCCAGGCAGCTTTTCCTTTCCAT...TGGAGCTTCTGGGTTGAGGAAAGGCAGAGCAAGATAATCTTGGAGGGGAACTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR GCA 90 bp CACCTTGGCTTAGCCTGGGAGGCGCTGCCATCTAAGGTGATGTTTTCTCAGAGACAAAAAGGGGCACAATaGAATGCCACTAGCCTCCAG +
Preference number: 4 (lower is better)
Translates to: HLGLAWEALPSKVMFSQRQKGAQ*NATSLQ
Trigger: CTGGAGGCTAGTGGCATTGCATTGTGCCCCTTTTTG...TCTCTGAGAAAACATCACCTTAGATGGCAGCGCCTCCCAGGCTAAGCCAAGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR GCA 90 bp TGGCTCTGTAGCTGTGTAAGCATTTCGCCTTGCGCTTCTGAGTCACTTCACTCCATGCATGGCTGGGAATaGCAGGCACCAGGATTCAGA +
Preference number: 4 (lower is better)
Translates to: WLCSCVSISPCASESLHSMHGWE*QAPGFR
Trigger: TCTGAATCCTGGTGCCTGGCATTCCCAGCCATGCAT...GGAGTGAAGTGACTCAGAAGCGCAAGGCGAAATGCTTACACAGCTACAGAGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR GCA 90 bp TCCATGTCTATATCAGCCCTAATGGGCAGAGAGGCTGGGGAATGCCAGCCTGTCTGCAAGAGAGAGCTATaGTCGGCTTTAACTCGCTCT +
Preference number: 4 (lower is better)
Translates to: SMSISALMGREAGECQPVCKREL*SALTRS
Trigger: AGAGCGAGTTAAAGCCGAGCATAGCTCTCTCTTGCA...GACAGGCTGGCATTCCCCAGCCTCTCTGCCCATTAGGGCTGATATAGACATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CCA 90 bp CACAGGACCCCAACCGGCCAGCTGCCATTTTCTGGTCATGAAGAGGAATTGGGAGTGGGTCCCAGATATTaGCCTGCAGTTCATCATTCA +
Preference number: 4 (lower is better)
Translates to: HRTPTGQLPFSGHEEELGVGPRY*PAVHHS
Trigger: TGAATGATGAACTGCAGGCCAATATCTGGGACCCAC...TCCCAATTCCTCTTCATGACCAGAAAATGGCAGCTGGCCGGTTGGGGTCCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR CCA 90 bp CACCTTGGCTTAGCCTGGGAGGCGCTGCCATCTAAGGTGATGTTTTCTCAGAGACTTATCCATGTGCTGTaGGTCCCAGATATTGGCCTG +
Preference number: 4 (lower is better)
Translates to: HLGLAWEALPSKVMFSQRLIHVL*VPDIGL
Trigger: CAGGCCAATATCTGGGACCCACAGCACATGGATAAG...TCTCTGAGAAAACATCACCTTAGATGGCAGCGCCTCCCAGGCTAAGCCAAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR CCA 90 bp TTCCACTCTCTCATCCAGGCGTGGTTGCGTGGGCATACACACTTTATGAAAATTTCCTTCTCAGGTGCTTaGAGGGGTGAGGGAGACCGG +
Preference number: 4 (lower is better)
Translates to: FHSLIQAWLRGHTHFMKISFSGA*RGEGDR
Trigger: CCGGTCTCCCTCACCCCTCCAAGCACCTGAGAAGGA...AATTTTCATAAAGTGTGTATGCCCACGCAACCACGCCTGGATGAGAGAGTGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CCA 90 bp GAGGAGGAGGTAGGAGGGCCAAGAAGGACCAGAGAGTCTCCACCTTGGCTTAGCGGTTCCCAAAGAGAATaGTTATCCAGATGGATGAGA +
Preference number: 4 (lower is better)
Translates to: EEEVGGPRRTRESPPWLSGSQRE*LSRWMR
Trigger: TCTCATCCATCTGGATAACCATTCTCTTTGGGAACC...GCTAAGCCAAGGTGGAGACTCTCTGGTCCTTCTTGGCCCTCCTACCTCCTCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR CCA 90 bp CATGATTCTCTGCCCCTGGCTGACACAAGAGAAGACAAAGAGGGCACAGGTGAGGATTCTGAGACAGCCTaGGCCTCTCCACAAACACAT +
Preference number: 4 (lower is better)
Translates to: HDSLPLADTREDKEGTGEDSETA*ASPQTH
Trigger: ATGTGTTTGTGGAGAGGCCCAGGCTGTCTCAGAATC...CTCACCTGTGCCCTCTTTGTCTTCTCTTGTGTCAGCCAGGGGCAGAGAATCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CCA 90 bp GTCAGCACCGAGCAACATTGGATATTCACCTGCAGGGTGCTAGGGAACTGTGTGTCACTGATCTTGCTCTaGCGGAAGAGGAGCTCAATG +
Preference number: 4 (lower is better)
Translates to: VSTEQHWIFTCRVLGNCVSLILL*RKRSSM
Trigger: CATTGAGCTCCTCTTCCGCCAGAGCAAGATCAGTGA...CACACAGTTCCCTAGCACCCTGCAGGTGAATATCCAATGTTGCTCGGTGCTGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CCA 90 bp GTCAGGCTGGGAGCCTTTTCCATAGGAGGTGATGTGGGCAAATCTTGGGGACCCAGGAGCTCAGGCTCTTaGAATTCAGTATACACACAG +
Preference number: 4 (lower is better)
Translates to: VRLGAFSIGGDVGKSWGPRSSGS*NSVYTQ
Trigger: CTGTGTGTATACTGAATTCCAAGAGCCTGAGCTCCT...GGGTCCCCAAGATTTGCCCACATCACCTCCTATGGAAAAGGCTCCCAGCCTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CCA 90 bp CTCAACCCAGAAGCTCCAGGAACACCTTGGGACCCTCAGAAGAAAGACATCAAAACGTACCCATATCGATaGCGACCCACGTCACGGATG +
Preference number: 4 (lower is better)
Translates to: LNPEAPGTPWDPQKKDIKTYPYR*RPTSRM
Trigger: CATCCGTGACGTGGGTCGCCATCGATATGGGTACGT...TTTGATGTCTTTCTTCTGAGGGTCCCAAGGTGTTCCTGGAGCTTCTGGGTTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CCA 90 bp TGGCCTATTTGGCCAGAATCCAGGTTCTACTCCATGTCAGCAGACAACCCAACAACGTACCCATATCGATaGCGACCCACGTCACGGATG +
Preference number: 4 (lower is better)
Translates to: WPIWPESRFYSMSADNPTTYPYR*RPTSRM
Trigger: CATCCGTGACGTGGGTCGCCATCGATATGGGTACGT...TGTTGGGTTGTCTGCTGACATGGAGTAGAACCTGGATTCTGGCCAAATAGGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR CCA 90 bp GACCGGTGGAGAGGAAACAGCAGAATCTATGCAGAATGGGAACCTGCACCTTTTAAGAGGTTGATGCTCTaGCAGTGGCAGGCCATGAGC +
Preference number: 4 (lower is better)
Translates to: DRWRGNSRIYAEWEPAPFKRLML*QWQAMS
Trigger: GCTCATGGCCTGCCACTGCCAGAGCATCAACCTCTT...AAAAGGTGCAGGTTCCCATTCTGCATAGATTCTGCTGTTTCCTCTCCACCGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR CCA 90 bp GCAGCCGGTCTCAATGGGCTTACTGACTCCTCTTCGCTCAAAATCACATCAGAGCGAGGATCTGCAGGTTaGGTTTCTCTGACTCCAGCA +
Preference number: 4 (lower is better)
Translates to: AAGLNGLTDSSSLKITSERGSAG*VSLTPA
Trigger: TGCTGGAGTCAGAGAAACCCAACCTGCAGATCCTCG...CTCTGATGTGATTTTGAGCGAAGAGGAGTCAGTAAGCCCATTGAGACCGGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR CCA 90 bp GTGGGGAAAAATGAAATGGCAGAGCCCAGACTATGCATGGCTGGGAATGCCAGGGTCTCTATCACCTCATaGATGTGCTGGCAGAAGGCA +
Preference number: 4 (lower is better)
Translates to: VGKNEMAEPRLCMAGNARVSITS*MCWQKA
Trigger: TGCCTTCTGCCAGCACATCCATGAGGTGATAGAGAC...CCTGGCATTCCCAGCCATGCATAGTCTGGGCTCTGCCATTTCATTTTTCCCCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CCA 90 bp TCCAAGATTATCTTGCTCTGCCTTTCCTCAACCCAGAAGCTCCAGGAACACCTTCACCTTGGCTTAGCCTaGGAGGCGCTGCCATCTAAG +
Preference number: 4 (lower is better)
Translates to: SKIILLCLSSTQKLQEHLHLGLA*EALPSK
Trigger: CTTAGATGGCAGCGCCTCCCAGGCTAAGCCAAGGTG...AAGGTGTTCCTGGAGCTTCTGGGTTGAGGAAAGGCAGAGCAAGATAATCTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CCA 90 bp CATGATTCTCTGCCCCTGGCTGACACAAGAGAAGACAAAGAGGGCACAGGTGAGAGGCACAAGAAACAGTaGGTCTCTCATCCAAGCTGG +
Preference number: 4 (lower is better)
Translates to: HDSLPLADTREDKEGTGERHKKQ*VSHPSW
Trigger: CCAGCTTGGATGAGAGACCCACTGTTTCTTGTGCCT...CTCACCTGTGCCCTCTTTGTCTTCTCTTGTGTCAGCCAGGGGCAGAGAATCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR CCA 90 bp GAGGAGGAGGTAGGAGGGCCAAGAAGGACCAGAGAGTCTCCACCTTGGCTTAGCAGAATCTATGCAGAATaGGAACCTGCACCTTTTCTG +
Preference number: 4 (lower is better)
Translates to: EEEVGGPRRTRESPPWLSRIYAE*EPAPFL
Trigger: CAGAAAAGGTGCAGGTTCCCATTCTGCATAGATTCT...GCTAAGCCAAGGTGGAGACTCTCTGGTCCTTCTTGGCCCTCCTACCTCCTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR CCA 90 bp AAATCTTGGGGACCCTGTAGTTCCCCTCCAAGATTATCTTGCTCTGCCTTTCCTACAGGCACAAGGCGCTaGGGACTCCATGGCAAGGAA +
Preference number: 4 (lower is better)
Translates to: KSWGPCSSPPRLSCSAFPTGTRR*GLHGKE
Trigger: TTCCTTGCCATGGAGTCCCCAGCGCCTTGTGCCTGT...AGGAAAGGCAGAGCAAGATAATCTTGGAGGGGAACTACAGGGTCCCCAAGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR CCA 90 bp CATTTTACTTGTCCAATTAGCCCAAGTCAGAGCTTCCTTCCGTGGGAAGGTTCTGCAGGCAGGGGAGCCTaGAGTCCAGCGTCCAATCTA +
Preference number: 4 (lower is better)
Translates to: HFTCPISPSQSFLPWEGSAGRGA*SPASNL
Trigger: TAGATTGGACGCTGGACTCCAGGCTCCCCTGCCTGC...AGAACCTTCCCACGGAAGGAAGCTCTGACTTGGGCTAATTGGACAAGTAAAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CCA 90 bp TTTACTTGTCCAATTAGCCCAAGTCAGAGCTTCCTTCCGTGGGAAGGTTCTGGACAGAGGCAGGGCCCCTaGATGATGACAGTGTTCCAC +
Preference number: 4 (lower is better)
Translates to: FTCPISPSQSFLPWEGSGQRQGP*MMTVFH
Trigger: GTGGAACACTGTCATCATCCAGGGGCCCTGCCTCTG...TCCAGAACCTTCCCACGGAAGGAAGCTCTGACTTGGGCTAATTGGACAAGTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR TCA 90 bp ACAGGTGAGATGCTGATTGGTGAGACCTCCCTCAGGGAAGACGAGGAGGAGGTACAGGCCTTTGATGCCTaGCATTCGAATTTTGGTCTT +
Preference number: 4 (lower is better)
Translates to: TGEMLIGETSLREDEEEVQAFDA*HSNFGL
Trigger: AAGACCAAAATTCGAATGTCAGGCATCAAAGGCCTG...TACCTCCTCCTCGTCTTCCCTGAGGGAGGTCTCACCAATCAGCATCTCACCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR TCA 90 bp CACAGGCGCTCAGCTGCACCAGTGTGGAGGGAAGGGTGGTTCAGATGTGGCATTGTGCTGCGGCTGAATTaGGTACATGATGATTTTAAA +
Preference number: 4 (lower is better)
Translates to: HRRSAAPVWREGWFRCGIVLRLN*VHDDFK
Trigger: TTTAAAATCATCATGTACTCAATTCAGCCGCAGCAC...AATGCCACATCTGAACCACCCTTCCCTCCACACTGGTGCAGCTGAGCGCCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR TCA 90 bp AGACGAGGAGGAGGTAGGAGGGCCAAGAAGGACCAGAGAGTCTCCACCTTGGCTGTGCTGCGGCTGAATTaGGTACATGATGATTTTAAA +
Preference number: 4 (lower is better)
Translates to: RRGGGRRAKKDQRVSTLAVLRLN*VHDDFK
Trigger: TTTAAAATCATCATGTACTCAATTCAGCCGCAGCAC...AGCCAAGGTGGAGACTCTCTGGTCCTTCTTGGCCCTCCTACCTCCTCCTCGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR TCA 90 bp CTGTATGGTACTCTGGTGGGGGATGCATGTCATTACGCATTTGTCCAAACCCACGTTGCTAGGCAGGGCTaGCATCATGTTGTTGCACTG +
Preference number: 4 (lower is better)
Translates to: LYGTLVGDACHYAFVQTHVARQG*HHVVAL
Trigger: CAGTGCAACAACATGATGTCAGCCCTGCCTAGCAAC...GTGGGTTTGGACAAATGCGTAATGACATGCATCCCCCACCAGAGTACCATACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR TCA 90 bp CCAAGATTATCTTGCTCTGCCTTTCCTCAACCCAGAAGCTCCAGGAACACCTTGGTTGCTAGGCAGGGCTaGCATCATGTTGTTGCACTG +
Preference number: 4 (lower is better)
Translates to: PRLSCSAFPQPRSSRNTLVARQG*HHVVAL
Trigger: CAGTGCAACAACATGATGTCAGCCCTGCCTAGCAAC...CAAGGTGTTCCTGGAGCTTCTGGGTTGAGGAAAGGCAGAGCAAGATAATCTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR TCA 90 bp CACTGTCAGCACCGAGCAACATTGGATATTCACCTGCAGGGTGCTAGGGAACTGTTGTGGCGGTTGCCATaGCGATCAATGAAACTGATG +
Preference number: 4 (lower is better)
Translates to: HCQHRATLDIHLQGARELLWRLP*RSMKLM
Trigger: CATCAGTTTCATTGATCGTCATGGCAACCGCCACAA...CAGTTCCCTAGCACCCTGCAGGTGAATATCCAATGTTGCTCGGTGCTGACAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR TCA 90 bp CACCTTGGCTTAGCCTGGGAGGCGCTGCCATCTAAGGTGATGTTTTCTCAGAGATTGTGGCGGTTGCCATaGCGATCAATGAAACTGATG +
Preference number: 4 (lower is better)
Translates to: HLGLAWEALPSKVMFSQRLWRLP*RSMKLM
Trigger: CATCAGTTTCATTGATCGTCATGGCAACCGCCACAA...TCTCTGAGAAAACATCACCTTAGATGGCAGCGCCTCCCAGGCTAAGCCAAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR TCA 90 bp GATACATACGGAAGCAACACTATGAAAGCTGTTCTCACCCTTATCTCTCCAGTTCCAGCACCAGACGGATaGGGTCCACCACCACCTCCT +
Preference number: 4 (lower is better)
Translates to: DTYGSNTMKAVLTLISPVPAPDG*GPPPPP
Trigger: AGGAGGTGGTGGTGGACCTCATCCGTCTGGTGCTGG...AACTGGAGAGATAAGGGTGAGAACAGCTTTCATAGTGTTGCTTCCGTATGTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR TCA 90 bp TTAGGGCAGGAAATGACTCTGTATGGTACTCTGGTGGGGGATGCATGTCATTACCTCCCAGGACTTCACTaGTCTTGCTCTGGCGGAAGA +
Preference number: 4 (lower is better)
Translates to: LGQEMTLYGTLVGDACHYLPGLH*SCSGGR
Trigger: TCTTCCGCCAGAGCAAGATCAGTGAAGTCCTGGGAG...GTAATGACATGCATCCCCCACCAGAGTACCATACAGAGTCATTTCCTGCCCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR TCA 90 bp ACAGGTGAGATGCTGATTGGTGAGACCTCCCTCAGGGAAGACGAGGAGGAGGTATTTCAAAGATCTGATTaGGTTTGCTCTGGAGCAGCG +
Preference number: 4 (lower is better)
Translates to: TGEMLIGETSLREDEEEVFQRSD*VCSGAA
Trigger: CGCTGCTCCAGAGCAAACTCAATCAGATCTTTGAAA...TACCTCCTCCTCGTCTTCCCTGAGGGAGGTCTCACCAATCAGCATCTCACCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR TCA 90 bp AGATTTGGGGTAAGGGGCCACTCTAACCAGAAGATTTCTAGGGTTAATGGGATGGACCGTAGGCTGCAGTaGTGGTTCCTGATGGGCTTG +
Preference number: 4 (lower is better)
Translates to: RFGVRGHSNQKISRVNGMDRRLQ*WFLMGL
Trigger: CAAGCCCATCAGGAACCATCACTGCAGCCTACGGTC...CATCCCATTAACCCTAGAAATCTTCTGGTTAGAGTGGCCCCTTACCCCAAATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR TCA 90 bp CATGATTCTCTGCCCCTGGCTGACACAAGAGAAGACAAAGAGGGCACAGGTGAGCGCTGCCATCTAAGGTaGTGTTTTCTCAGAGATCAC +
Preference number: 4 (lower is better)
Translates to: HDSLPLADTREDKEGTGERCHLR*CFLRDH
Trigger: GTGATCTCTGAGAAAACATCACCTTAGATGGCAGCG...CTCACCTGTGCCCTCTTTGTCTTCTCTTGTGTCAGCCAGGGGCAGAGAATCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR TCA 90 bp CTTTCCCACAGGACCCCAACCGGCCAGCTGCCATTTTCTGGTCATGAAGAGGAATCTCAATGGGCTTACTaGCTCCTCTTCGCTCAAAAT +
Preference number: 4 (lower is better)
Translates to: LSHRTPTGQLPFSGHEEESQWAY*LLFAQN
Trigger: ATTTTGAGCGAAGAGGAGTCAGTAAGCCCATTGAGA...TTCCTCTTCATGACCAGAAAATGGCAGCTGGCCGGTTGGGGTCCTGTGGGAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR TCA 90 bp AGTGATGGAAAGGAAAAGCTGCCTGGGACCGGTGGAGAGGAAACAGCAGAATCTCTAGGGTTAATGGGATaGAGAGGCAACATGTTGCCC +
Preference number: 4 (lower is better)
Translates to: SDGKEKLPGTGGEETAESLGLMG*RGNMLP
Trigger: GGGCAACATGTTGCCTCTTCATCCCATTAACCCTAG...AGATTCTGCTGTTTCCTCTCCACCGGTCCCAGGCAGCTTTTCCTTTCCATCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR TCA 90 bp GATGTGGGCAAATCTTGGGGACCCTGTAGTTCCCCTCCAAGATTATCTTGCTCTAGGATGGGCCCATCATaGCTATCCTGCAGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: DVGKSWGPCSSPPRLSCSRMGPS*LSCSLQ
Trigger: CTGAAGACTGCAGGATAGTCATGATGGGCCCATCCT...AGAGCAAGATAATCTTGGAGGGGAACTACAGGGTCCCCAAGATTTGCCCACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR TCA 90 bp GATGTGGGCAAATCTTGGGGACCCTGTAGTTCCCCTCCAAGATTATCTTGCTCTTTGAAAAGGGCATCGTaGTGGCTCACTGGGAGATCG +
Preference number: 4 (lower is better)
Translates to: DVGKSWGPCSSPPRLSCSLKRAS*WLTGRS
Trigger: CGATCTCCCAGTGAGCCATCACGATGCCCTTTTCAA...AGAGCAAGATAATCTTGGAGGGGAACTACAGGGTCCCCAAGATTTGCCCACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR TCA 90 bp AACCCAAAGGGGTCTCCATGGCTCCTCCCAAGCCACAAGCGTTGCCAGGTGGTGACATTAACATTTATTTaGAAAGGGCATCGTGATGGC +
Preference number: 4 (lower is better)
Translates to: NPKGSPWLLPSHKRCQVVTLTFI*KGHRDG
Trigger: GCCATCACGATGCCCTTTTCAAATAAATGTTAATGT...CACCACCTGGCAACGCTTGTGGCTTGGGAGGAGCCATGGAGACCCCTTTGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR GCA 90 bp AAATCTTGGGGACCCTGTAGTTCCCCTCCAAGATTATCTTGCTCTGCCTTTCCTTTCCTCACCACCCCTTaGAGGCCTTTGATGCCTGAC +
Preference number: 4 (lower is better)
Translates to: KSWGPCSSPPRLSCSAFPFLTTP*RPLMPD
Trigger: GTCAGGCATCAAAGGCCTGCAAGGGGTGGTGAGGAA...AGGAAAGGCAGAGCAAGATAATCTTGGAGGGGAACTACAGGGTCCCCAAGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR GCA 90 bp GAGAGAGAACCCAACTCTGAAAAACGTCCAGCAGACAGGACTGTGGGAGGCCAATCCCAGATATTGGCCTaGAGTTCATCATTCACCGTC +
Preference number: 4 (lower is better)
Translates to: EREPNSEKRPADRTVGGQSQILA*SSSFTV
Trigger: GACGGTGAATGATGAACTGCAGGCCAATATCTGGGA...TTGGCCTCCCACAGTCCTGTCTGCTGGACGTTTTTCAGAGTTGGGTTCTCTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR GCA 90 bp CACCTTGGCTTAGCCTGGGAGGCGCTGCCATCTAAGGTGATGTTTTCTCAGAGAAAACCTGTGGATACCTaGAGGAGGGATTTTAGCAGC +
Preference number: 4 (lower is better)
Translates to: HLGLAWEALPSKVMFSQRKPVDT*RRDFSS
Trigger: GCTGCTAAAATCCCTCCTGCAGGTATCCACAGGTTT...TCTCTGAGAAAACATCACCTTAGATGGCAGCGCCTCCCAGGCTAAGCCAAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR GCA 90 bp CACCTTGGCTTAGCCTGGGAGGCGCTGCCATCTAAGGTGATGTTTTCTCAGAGACGTTTGTTTCCTCCTTaGAGCTCAGGTAGATGTGTC +
Preference number: 4 (lower is better)
Translates to: HLGLAWEALPSKVMFSQRRLFPP*SSGRCV
Trigger: GACACATCTACCTGAGCTGCAAGGAGGAAACAAACG...TCTCTGAGAAAACATCACCTTAGATGGCAGCGCCTCCCAGGCTAAGCCAAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR GCA 90 bp CCAAGATTATCTTGCTCTGCCTTTCCTCAACCCAGAAGCTCCAGGAACACCTTGGATTCTACCTCCACCTaGAGGGAGATGGTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: PRLSCSAFPQPRSSRNTLDSTST*REMVSP
Trigger: TGGAGAGACCATCTCCCTGCAGGTGGAGGTAGAATC...CAAGGTGTTCCTGGAGCTTCTGGGTTGAGGAAAGGCAGAGCAAGATAATCTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR GCA 90 bp GATGTGGGCAAATCTTGGGGACCCTGTAGTTCCCCTCCAAGATTATCTTGCTCTTTGGTGCCGAGGATCTaGAGGTTGGGTTTCTCTGAC +
Preference number: 4 (lower is better)
Translates to: DVGKSWGPCSSPPRLSCSLVPRI*RLGFSD
Trigger: GTCAGAGAAACCCAACCTGCAGATCCTCGGCACCAA...AGAGCAAGATAATCTTGGAGGGGAACTACAGGGTCCCCAAGATTTGCCCACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR GCA 90 bp CTGTATGGTACTCTGGTGGGGGATGCATGTCATTACGCATTTGTCCAAACCCACTCACAAACGAGTTGGTaGCGAGGATCTGCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: LYGTLVGDACHYAFVQTHSQTSW*RGSAGW
Trigger: CCAACCTGCAGATCCTCGGCACCAACTCGTTTGTGA...GTGGGTTTGGACAAATGCGTAATGACATGCATCCCCCACCAGAGTACCATACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR GCA 90 bp ATTACGAGATATGGGCTACAGCATTTGTGGATTCACAACTCTGCCTCCACGCGCCCTCTGGGGAGGACATaGCCTTCACTCAAAACACCA +
Preference number: 4 (lower is better)
Translates to: ITRYGLQHLWIHNSASTRPLGRT*PSLKTP
Trigger: TGGTGTTTTGAGTGAAGGGCATGTCCTCCCCAGAGG...GCGCGTGGAGGCAGAGTTGTGAATCCACAAATGCTGTAGCCCATATCTCGTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR GCA 90 bp AGATTTGGGGTAAGGGGCCACTCTAACCAGAAGATTTCTAGGGTTAATGGGATGCATTCAGAAGCCACGTaGCAAGCAGGCGCAGTGGCT +
Preference number: 4 (lower is better)
Translates to: RFGVRGHSNQKISRVNGMHSEAT*QAGAVA
Trigger: AGCCACTGCGCCTGCTTGGCACGTGGCTTCTGAATG...CATCCCATTAACCCTAGAAATCTTCTGGTTAGAGTGGCCCCTTACCCCAAATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR GCA 90 bp GTAGTTCCCCTCCAAGATTATCTTGCTCTGCCTTTCCTCAACCCAGAAGCTCCACTCATCCAAGCTGGGTaGAGGATAAAACCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: VVPLQDYLALPFLNPEAPLIQAG*RIKPGR
Trigger: CCTCCCAGGTTTTATCCTGCACCCAGCTTGGATGAG...TGGAGCTTCTGGGTTGAGGAAAGGCAGAGCAAGATAATCTTGGAGGGGAACTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR GCA 90 bp CCTGAGAGACACCCCATGATTCTCTGCCCCTGGCTGACACAAGAGAAGACAAAGCAATGGAATGGAAACTaGAAGGCATCATGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: PERHPMILCPWLTQEKTKQWNGN*KASCPR
Trigger: CCTGGGACATGATGCCTTGCAGTTTCCATTCCATTG...CTTTGTCTTCTCTTGTGTCAGCCAGGGGCAGAGAATCATGGGGTGTCTCTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR GCA 90 bp AGAGGAATTGGGAAAAATAGACTCACTTCTGCAGGGCACTCTCTGTCACCAGGTCCCCAACCGGCCAGCTaGCATTTTCTGGTCATGAAG +
Preference number: 4 (lower is better)
Translates to: RGIGKNRLTSAGHSLSPGPQPAS*HFLVMK
Trigger: CTTCATGACCAGAAAATGGCAGCTGGCCGGTTGGGG...ACCTGGTGACAGAGAGTGCCCTGCAGAAGTGAGTCTATTTTTCCCAATTCCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR GCA 90 bp TCCATGTCTATATCAGCCCTAATGGGCAGAGAGGCTGGGGAATGCCAGCCTGTCAGGTGCACGTCACCATaGCTGGCTGATTTTTCAATT +
Preference number: 4 (lower is better)
Translates to: SMSISALMGREAGECQPVRCTSP*LADFSI
Trigger: AATTGAAAAATCAGCCAGGCATGGTGACGTGCACCT...GACAGGCTGGCATTCCCCAGCCTCTCTGCCCATTAGGGCTGATATAGACATGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CCA 90 bp GTCAGCACCGAGCAACATTGGATATTCACCTGCAGGGTGCTAGGGAACTGTGTGTCATCATGGCTCGAGTaGCACATTTCACTGAATCGG +
Preference number: 4 (lower is better)
Translates to: VSTEQHWIFTCRVLGNCVSSWLE*HISLNR
Trigger: CCGATTCAGTGAAATGTGCCACTCGAGCCATGATGA...CACACAGTTCCCTAGCACCCTGCAGGTGAATATCCAATGTTGCTCGGTGCTGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CCA 90 bp CCTGAGAGACACCCCATGATTCTCTGCCCCTGGCTGACACAAGAGAAGACAAAGTCATCATGGCTCGAGTaGCACATTTCACTGAATCGG +
Preference number: 4 (lower is better)
Translates to: PERHPMILCPWLTQEKTKSSWLE*HISLNR
Trigger: CCGATTCAGTGAAATGTGCCACTCGAGCCATGATGA...CTTTGTCTTCTCTTGTGTCAGCCAGGGGCAGAGAATCATGGGGTGTCTCTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CCA 90 bp GAGAGAGAACCCAACTCTGAAAAACGTCCAGCAGACAGGACTGTGGGAGGCCAAGGATGGCAAACACCTTaGGTTCCCAAAGAGAATGGT +
Preference number: 4 (lower is better)
Translates to: EREPNSEKRPADRTVGGQGWQTP*VPKENG
Trigger: ACCATTCTCTTTGGGAACCCAAGGTGTTTGCCATCC...TTGGCCTCCCACAGTCCTGTCTGCTGGACGTTTTTCAGAGTTGGGTTCTCTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CCA 90 bp ATCTATGACGCATACGTGGGGAGAGTCAGTACAAGTGTGGAATTACTCGAGAAATGGCCCAGGAGCTGCTaGATGACCAGGTGTGAGTGC +
Preference number: 4 (lower is better)
Translates to: IYDAYVGRVSTSVELLEKWPRSC*MTRCEC
Trigger: GCACTCACACCTGGTCATCCAGCAGCTCCTGGGCCA...TTTCTCGAGTAATTCCACACTTGTACTGACTCTCCCCACGTATGCGTCATAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CCA 90 bp ATTACGAGATATGGGCTACAGCATTTGTGGATTCACAACTCTGCCTCCACGCGCCTCGGGGAGCATGTATaGAGCCTCTTTCTTCCTGGT +
Preference number: 4 (lower is better)
Translates to: ITRYGLQHLWIHNSASTRLGEHV*SLFLPG
Trigger: ACCAGGAAGAAAGAGGCTCCATACATGCTCCCCGAG...GCGCGTGGAGGCAGAGTTGTGAATCCACAAATGCTGTAGCCCATATCTCGTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR CCA 90 bp ACAGGTGAGATGCTGATTGGTGAGACCTCCCTCAGGGAAGACGAGGAGGAGGTACAATGCTCCTCCTCTTaGATAAACGATCCTCATCTG +
Preference number: 4 (lower is better)
Translates to: TGEMLIGETSLREDEEEVQCSSS*INDPHL
Trigger: CAGATGAGGATCGTTTATCCAAGAGGAGGAGCATTG...TACCTCCTCCTCGTCTTCCCTGAGGGAGGTCTCACCAATCAGCATCTCACCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR CCA 90 bp GTGGGGAAAAATGAAATGGCAGAGCCCAGACTATGCATGGCTGGGAATGCCAGGTCAGCTTCTCCATGTTaGTCTTCACCAGACCATCCT +
Preference number: 4 (lower is better)
Translates to: VGKNEMAEPRLCMAGNARSASPC*SSPDHP
Trigger: AGGATGGTCTGGTGAAGACCAACATGGAGAAGCTGA...CCTGGCATTCCCAGCCATGCATAGTCTGGGCTCTGCCATTTCATTTTTCCCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CCA 90 bp CATGCACACACACAGCCAGGTCGTGAGGCTCTAAGTGGACACAGACACATTACGTCAGCTTCTCCATGTTaGTCTTCACCAGACCATCCT +
Preference number: 4 (lower is better)
Translates to: HAHTQPGREALSGHRHITSASPC*SSPDHP
Trigger: AGGATGGTCTGGTGAAGACCAACATGGAGAAGCTGA...CGTAATGTGTCTGTGTCCACTTAGAGCCTCACGACCTGGCTGTGTGTGTGCATG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR CCA 90 bp ACTTATCCTCTGTACGTCCATCCATTCATCCACTGTCAGCACCGAGCAACATTGACGTACCCATATCGATaGCGACCCACGTCACGGATG +
Preference number: 4 (lower is better)
Translates to: TYPLYVHPFIHCQHRATLTYPYR*RPTSRM
Trigger: CATCCGTGACGTGGGTCGCCATCGATATGGGTACGT...CAATGTTGCTCGGTGCTGACAGTGGATGAATGGATGGACGTACAGAGGATAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CCA 90 bp GATGTGGGCAAATCTTGGGGACCCTGTAGTTCCCCTCCAAGATTATCTTGCTCTCGAGGATCTGCAGGTTaGGTTTCTCTGACTCCAGCA +
Preference number: 4 (lower is better)
Translates to: DVGKSWGPCSSPPRLSCSRGSAG*VSLTPA
Trigger: TGCTGGAGTCAGAGAAACCCAACCTGCAGATCCTCG...AGAGCAAGATAATCTTGGAGGGGAACTACAGGGTCCCCAAGATTTGCCCACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CCA 90 bp CCATCCAGCTCCGTCCTCTGGGGAGGACATGCCCTTCACTCAAAACACCAAGTATGTCCTCCTCGATGTTaGCAAACTTCACAAACGAGT +
Preference number: 4 (lower is better)
Translates to: PSSSVLWGGHALHSKHQVCPPRC*QTSQTS
Trigger: ACTCGTTTGTGAAGTTTGCCAACATCGAGGAGGACA...TACTTGGTGTTTTGAGTGAAGGGCATGTCCTCCCCAGAGGACGGAGCTGGATGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CCA 90 bp AACATGAACAGACAACTGGGAGATGAGCAAGAGAGTGAGAGACACAGCAGGGACGATGTGGGCAAATCTTaGGGACCCTGTAGTTCCCCT +
Preference number: 4 (lower is better)
Translates to: NMNRQLGDEQESERHSRDDVGKS*GPCSSP
Trigger: AGGGGAACTACAGGGTCCCCAAGATTTGCCCACATC...GTCCCTGCTGTGTCTCTCACTCTCTTGCTCATCTCCCAGTTGTCTGTTCATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CCA 90 bp TCCAAGATTATCTTGCTCTGCCTTTCCTCAACCCAGAAGCTCCAGGAACACCTTTCACCCTGCCTCCTTTaGAAAGCAGACTCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: SKIILLCLSSTQKLQEHLSPCLL*KADSRE
Trigger: CTCCCTGGAGTCTGCTTTCCAAAGGAGGCAGGGTGA...AAGGTGTTCCTGGAGCTTCTGGGTTGAGGAAAGGCAGAGCAAGATAATCTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR CCA 90 bp GGGCTTGGAAGGGCAGGACTCACTGATGCTAGACCAAGGGCCAGGGTACCTCCCAAAAACGGATTCCTTTaGATCAAGAAATCTACTCAC +
Preference number: 4 (lower is better)
Translates to: GLGRAGLTDARPRARVPPKNGFL*IKKSTH
Trigger: GTGAGTAGATTTCTTGATCCAAAGGAATCCGTTTTT...GGGAGGTACCCTGGCCCTTGGTCTAGCATCAGTGAGTCCTGCCCTTCCAAGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR CCA 90 bp CATGCACACACACAGCCAGGTCGTGAGGCTCTAAGTGGACACAGACACATTACGAGGGGCAGAAACATCTaGGGATCTCAGGTTCTAATG +
Preference number: 4 (lower is better)
Translates to: HAHTQPGREALSGHRHITRGRNI*GSQVLM
Trigger: CATTAGAACCTGAGATCCCCAGATGTTTCTGCCCCT...CGTAATGTGTCTGTGTCCACTTAGAGCCTCACGACCTGGCTGTGTGTGTGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR CCA 90 bp CCATCCAGCTCCGTCCTCTGGGGAGGACATGCCCTTCACTCAAAACACCAAGTAATTGATATCTGTGTATaGGAAAGGGGGCTGGACAGA +
Preference number: 4 (lower is better)
Translates to: PSSSVLWGGHALHSKHQVIDICV*ERGLDR
Trigger: TCTGTCCAGCCCCCTTTCCCATACACAGATATCAAT...TACTTGGTGTTTTGAGTGAAGGGCATGTCCTCCCCAGAGGACGGAGCTGGATGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR CCA 90 bp CATGATTCTCTGCCCCTGGCTGACACAAGAGAAGACAAAGAGGGCACAGGTGAGCTGGGGACAATGGAATaGAAACTGCAAGGCATCATG +
Preference number: 4 (lower is better)
Translates to: HDSLPLADTREDKEGTGELGTME*KLQGIM
Trigger: CATGATGCCTTGCAGTTTCCATTCCATTGTCCCCAG...CTCACCTGTGCCCTCTTTGTCTTCTCTTGTGTCAGCCAGGGGCAGAGAATCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR CCA 90 bp GTGGGGAAAAATGAAATGGCAGAGCCCAGACTATGCATGGCTGGGAATGCCAGGTCTATGACGCATACGTaGGGAGAGTCAGTACAAGTG +
Preference number: 4 (lower is better)
Translates to: VGKNEMAEPRLCMAGNARSMTHT*GESVQV
Trigger: CACTTGTACTGACTCTCCCCACGTATGCGTCATAGA...CCTGGCATTCCCAGCCATGCATAGTCTGGGCTCTGCCATTTCATTTTTCCCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CCA 90 bp TTCCACTCTCTCATCCAGGCGTGGTTGCGTGGGCATACACACTTTATGAAAATTGCCGTGCTGCCATCATaGCTTACAGCAGCCTTGACC +
Preference number: 4 (lower is better)
Translates to: FHSLIQAWLRGHTHFMKIAVLPS*LTAALT
Trigger: GGTCAAGGCTGCTGTAAGCCATGATGGCAGCACGGC...AATTTTCATAAAGTGTGTATGCCCACGCAACCACGCCTGGATGAGAGAGTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CCA 90 bp GCATCTGGGGAAAGGCTTGATGTCAAAGCTGTCCTCCATGTCTATATCAGCCCTGGAGAGATGAAGAGGTaGAGCACAGGGGGTTTTAGG +
Preference number: 4 (lower is better)
Translates to: ASGERLDVKAVLHVYISPGEMKR*STGGFR
Trigger: CCTAAAACCCCCTGTGCTCCACCTCTTCATCTCTCC...AGGGCTGATATAGACATGGAGGACAGCTTTGACATCAAGCCTTTCCCCAGATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CCA 90 bp CATTTTACTTGTCCAATTAGCCCAAGTCAGAGCTTCCTTCCGTGGGAAGGTTCTGAGGTTCCCAGTCCTTaGAGCTGGAAGGGCCATGGA +
Preference number: 4 (lower is better)
Translates to: HFTCPISPSQSFLPWEGSEVPSP*SWKGHG
Trigger: TCCATGGCCCTTCCAGCTCCAAGGACTGGGAACCTC...AGAACCTTCCCACGGAAGGAAGCTCTGACTTGGGCTAATTGGACAAGTAAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CCA 90 bp CATTTTACTTGTCCAATTAGCCCAAGTCAGAGCTTCCTTCCGTGGGAAGGTTCTAGCCCAGACTATGCATaGCTGGGAATGCCAGGCACC +
Preference number: 4 (lower is better)
Translates to: HFTCPISPSQSFLPWEGSSPDYA*LGMPGT
Trigger: GGTGCCTGGCATTCCCAGCCATGCATAGTCTGGGCT...AGAACCTTCCCACGGAAGGAAGCTCTGACTTGGGCTAATTGGACAAGTAAAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CCA 90 bp TTCCACTCTCTCATCCAGGCGTGGTTGCGTGGGCATACACACTTTATGAAAATTAGAAGGGATGCTCCCTaGGCAAGAGCAGGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: FHSLIQAWLRGHTHFMKIRRDAP*ARAGRE
Trigger: CTCTCTCCCTGCTCTTGCCCAGGGAGCATCCCTTCT...AATTTTCATAAAGTGTGTATGCCCACGCAACCACGCCTGGATGAGAGAGTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR CAA 72 bp ATGGTACTCTGGTGGGGGATGCATGTCATTACGCATTaGTCCAAACCCACAGAATGTACAACGCTGAGGGCG +
Preference number: 4 (lower is better)
Translates to: MVLWWGMHVITH*SKPTECTTLRA
Trigger: CGCCCTCAGCGTTGTACATTCTGTGGGTTTGGACAAATGCGTAATGACATGCATCCCCCACCAGAGTACCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR CAA 72 bp TGCATGGCTGGGAATGCCAGGCACCAGGATTCAGATTaGACCAAACAAGCATTTATTCACCCCTGCGGCAAG +
Preference number: 4 (lower is better)
Translates to: CMAGNARHQDSD*TKQAFIHPCGK
Trigger: CTTGCCGCAGGGGTGAATAAATGCTTGTTTGGTCAAATCTGAATCCTGGTGCCTGGCATTCCCAGCCATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR CAA 72 bp GTCCATCCATTCATCCACTGTCAGCACCGAGCAACATaGGATATTCACCTGCAGGGTGCTAGGGAACTGTGT +
Preference number: 4 (lower is better)
Translates to: VHPFIHCQHRAT*DIHLQGARELC
Trigger: ACACAGTTCCCTAGCACCCTGCAGGTGAATATCCAATGTTGCTCGGTGCTGACAGTGGATGAATGGATGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR TCA 90 bp CCTGAGAGACACCCCATGATTCTCTGCCCCTGGCTGACACAAGAGAAGACAAAGAGTGGCACATTTCACTaGATCGGGACACAAAGAAGT +
Preference number: 4 (lower is better)
Translates to: PERHPMILCPWLTQEKTKSGTFH*IGTQRS
Trigger: ACTTCTTTGTGTCCCGATTCAGTGAAATGTGCCACT...CTTTGTCTTCTCTTGTGTCAGCCAGGGGCAGAGAATCATGGGGTGTCTCTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR TCA 90 bp CACTGTCAGCACCGAGCAACATTGGATATTCACCTGCAGGGTGCTAGGGAACTGCAGGCCTTTGATGCCTaGCATTCGAATTTTGGTCTT +
Preference number: 4 (lower is better)
Translates to: HCQHRATLDIHLQGARELQAFDA*HSNFGL
Trigger: AAGACCAAAATTCGAATGTCAGGCATCAAAGGCCTG...CAGTTCCCTAGCACCCTGCAGGTGAATATCCAATGTTGCTCGGTGCTGACAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR TCA 90 bp CTGTATGGTACTCTGGTGGGGGATGCATGTCATTACGCATTTGTCCAAACCCACCCCCTTGCAGGCCTTTaGTGCCTGACATTCGAATTT +
Preference number: 4 (lower is better)
Translates to: LYGTLVGDACHYAFVQTHPLAGL*CLTFEF
Trigger: AAATTCGAATGTCAGGCATCAAAGGCCTGCAAGGGG...GTGGGTTTGGACAAATGCGTAATGACATGCATCCCCCACCAGAGTACCATACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR TCA 90 bp GACCGGTGGAGAGGAAACAGCAGAATCTATGCAGAATGGGAACCTGCACCTTTTGGAAGAGGAGCTCAATaGCCACCCCATCAAGATTCT +
Preference number: 4 (lower is better)
Translates to: DRWRGNSRIYAEWEPAPFGRGAQ*PPHQDS
Trigger: AGAATCTTGATGGGGTGGTCATTGAGCTCCTCTTCC...AAAAGGTGCAGGTTCCCATTCTGCATAGATTCTGCTGTTTCCTCTCCACCGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR TCA 90 bp CATGATTCTCTGCCCCTGGCTGACACAAGAGAAGACAAAGAGGGCACAGGTGAGTTTCAAAGATCTGATTaGGTTTGCTCTGGAGCAGCG +
Preference number: 4 (lower is better)
Translates to: HDSLPLADTREDKEGTGEFQRSD*VCSGAA
Trigger: CGCTGCTCCAGAGCAAACTCAATCAGATCTTTGAAA...CTCACCTGTGCCCTCTTTGTCTTCTCTTGTGTCAGCCAGGGGCAGAGAATCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR TCA 90 bp TGGCTCTGTAGCTGTGTAAGCATTTCGCCTTGCGCTTCTGAGTCACTTCACTCCAAGTTTTTCTGGAGCTaGGAGGGCATAGAAGGTCAG +
Preference number: 4 (lower is better)
Translates to: WLCSCVSISPCASESLHSKFFWS*EGIEGQ
Trigger: CTGACCTTCTATGCCCTCTCAGCTCCAGAAAAACTT...GGAGTGAAGTGACTCAGAAGCGCAAGGCGAAATGCTTACACAGCTACAGAGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR TCA 90 bp TCCAAGATTATCTTGCTCTGCCTTTCCTCAACCCAGAAGCTCCAGGAACACCTTGCAAGTTCTCCTCATTaGCTTGGGCCACGTCCTGAA +
Preference number: 4 (lower is better)
Translates to: SKIILLCLSSTQKLQEHLASSPH*LGPRPE
Trigger: TTCAGGACGTGGCCCAAGTCAATGAGGAGAACTTGC...AAGGTGTTCCTGGAGCTTCTGGGTTGAGGAAAGGCAGAGCAAGATAATCTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR TCA 90 bp GCAGCCGGTCTCAATGGGCTTACTGACTCCTCTTCGCTCAAAATCACATCAGAGCGCTGCCATCTAAGGTaGTGTTTTCTCAGAGATCAC +
Preference number: 4 (lower is better)
Translates to: AAGLNGLTDSSSLKITSERCHLR*CFLRDH
Trigger: GTGATCTCTGAGAAAACATCACCTTAGATGGCAGCG...CTCTGATGTGATTTTGAGCGAAGAGGAGTCAGTAAGCCCATTGAGACCGGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR TCA 90 bp CCAAGATTATCTTGCTCTGCCTTTCCTCAACCCAGAAGCTCCAGGAACACCTTGGAGAGAACCCAACTCTaGAAAACGTCCAGCAGACAG +
Preference number: 4 (lower is better)
Translates to: PRLSCSAFPQPRSSRNTLERTQL*KTSSRQ
Trigger: CTGTCTGCTGGACGTTTTTCAGAGTTGGGTTCTCTC...CAAGGTGTTCCTGGAGCTTCTGGGTTGAGGAAAGGCAGAGCAAGATAATCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR TCA 90 bp CTCAACCCAGAAGCTCCAGGAACACCTTGGGACCCTCAGAAGAAAGACATCAAACTTTTCCATAGGAGGTaGTGTGGGCAAATCTTGGGG +
Preference number: 4 (lower is better)
Translates to: LNPEAPGTPWDPQKKDIKLFHRR*CGQILG
Trigger: CCCCAAGATTTGCCCACATCACCTCCTATGGAAAAG...TTTGATGTCTTTCTTCTGAGGGTCCCAAGGTGTTCCTGGAGCTTCTGGGTTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR TCA 90 bp GACCGGTGGAGAGGAAACAGCAGAATCTATGCAGAATGGGAACCTGCACCTTTTCTTTTCCATAGGAGGTaGTGTGGGCAAATCTTGGGG +
Preference number: 4 (lower is better)
Translates to: DRWRGNSRIYAEWEPAPFLFHRR*CGQILG
Trigger: CCCCAAGATTTGCCCACATCACCTCCTATGGAAAAG...AAAAGGTGCAGGTTCCCATTCTGCATAGATTCTGCTGTTTCCTCTCCACCGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR TCA 90 bp GTAGTTCCCCTCCAAGATTATCTTGCTCTGCCTTTCCTCAACCCAGAAGCTCCATTTGCTAAGCGGCAGTaGTGGAAAGGAAAAGCTGCC +
Preference number: 4 (lower is better)
Translates to: VVPLQDYLALPFLNPEAPFAKRQ*WKGKAA
Trigger: GGCAGCTTTTCCTTTCCATCACTGCCGCTTAGCAAA...TGGAGCTTCTGGGTTGAGGAAAGGCAGAGCAAGATAATCTTGGAGGGGAACTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR TCA 90 bp TTTACTTGTCCAATTAGCCCAAGTCAGAGCTTCCTTCCGTGGGAAGGTTCTGGAGCAGGTGGGGAAAAATaGAATGGCAGAGCCCAGACT +
Preference number: 4 (lower is better)
Translates to: FTCPISPSQSFLPWEGSGAGGEK*NGRAQT
Trigger: AGTCTGGGCTCTGCCATTTCATTTTTCCCCACCTGC...TCCAGAACCTTCCCACGGAAGGAAGCTCTGACTTGGGCTAATTGGACAAGTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR TCA 90 bp CTGGGCAAGAGCAGGGAGAGAGAAGTTTATGAGGAAACTGAACAGGGGCCGGGCTTTGGCATTTTTGTTTaGGTAGGAGAGGACAGAAGT +
Preference number: 4 (lower is better)
Translates to: LGKSREREVYEETEQGPGFGIFV*VGEDRS
Trigger: ACTTCTGTCCTCTCCTACTCAAACAAAAATGCCAAA...GCCCGGCCCCTGTTCAGTTTCCTCATAAACTTCTCTCTCCCTGCTCTTGCCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR GCA 90 bp CTCAACCCAGAAGCTCCAGGAACACCTTGGGACCCTCAGAAGAAAGACATCAAAAACATGCGCTCCTCGTaGTCCTTGATGATCTTGGTG +
Preference number: 4 (lower is better)
Translates to: LNPEAPGTPWDPQKKDIKNMRSS*SLMILV
Trigger: CACCAAGATCATCAAGGAGCACGAGGAGCGCATGTT...TTTGATGTCTTTCTTCTGAGGGTCCCAAGGTGTTCCTGGAGCTTCTGGGTTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR GCA 90 bp CCATCCAGCTCCGTCCTCTGGGGAGGACATGCCCTTCACTCAAAACACCAAGTACTGACATCATGTTGTTaGACTGGAAACCTGTGGATA +
Preference number: 4 (lower is better)
Translates to: PSSSVLWGGHALHSKHQVLTSCC*TGNLWI
Trigger: TATCCACAGGTTTCCAGTGCAACAACATGATGTCAG...TACTTGGTGTTTTGAGTGAAGGGCATGTCCTCCCCAGAGGACGGAGCTGGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR GCA 90 bp CACCTTGGCTTAGCCTGGGAGGCGCTGCCATCTAAGGTGATGTTTTCTCAGAGAAGATGGTCTCTCCAATaGTCCTCCTCTTGGATAAAC +
Preference number: 4 (lower is better)
Translates to: HLGLAWEALPSKVMFSQRRWSLQ*SSSWIN
Trigger: GTTTATCCAAGAGGAGGAGCATTGGAGAGACCATCT...TCTCTGAGAAAACATCACCTTAGATGGCAGCGCCTCCCAGGCTAAGCCAAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR GCA 90 bp TTTACTTGTCCAATTAGCCCAAGTCAGAGCTTCCTTCCGTGGGAAGGTTCTGGAGATTCTACCTCCACCTaGAGGGAGATGGTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: FTCPISPSQSFLPWEGSGDSTST*REMVSP
Trigger: TGGAGAGACCATCTCCCTGCAGGTGGAGGTAGAATC...TCCAGAACCTTCCCACGGAAGGAAGCTCTGACTTGGGCTAATTGGACAAGTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR GCA 90 bp GATGTGGGCAAATCTTGGGGACCCTGTAGTTCCCCTCCAAGATTATCTTGCTCTAATCTCCTCGAAGGGTaGCTTCTGGAACTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: DVGKSWGPCSSPPRLSCSNLLEG*LLELLH
Trigger: GTGGAGAAGTTCCAGAAGGCACCCTTCGAGGAGATT...AGAGCAAGATAATCTTGGAGGGGAACTACAGGGTCCCCAAGATTTGCCCACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR GCA 90 bp AAATCTTGGGGACCCTGTAGTTCCCCTCCAAGATTATCTTGCTCTGCCTTTCCTTTGGTGCCGAGGATCTaGAGGTTGGGTTTCTCTGAC +
Preference number: 4 (lower is better)
Translates to: KSWGPCSSPPRLSCSAFPLVPRI*RLGFSD
Trigger: GTCAGAGAAACCCAACCTGCAGATCCTCGGCACCAA...AGGAAAGGCAGAGCAAGATAATCTTGGAGGGGAACTACAGGGTCCCCAAGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR GCA 90 bp TCCAAGATTATCTTGCTCTGCCTTTCCTCAACCCAGAAGCTCCAGGAACACCTTTCACAAACGAGTTGGTaGCGAGGATCTGCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: SKIILLCLSSTQKLQEHLSQTSW*RGSAGW
Trigger: CCAACCTGCAGATCCTCGGCACCAACTCGTTTGTGA...AAGGTGTTCCTGGAGCTTCTGGGTTGAGGAAAGGCAGAGCAAGATAATCTTGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR GCA 90 bp TTAGGGCAGGAAATGACTCTGTATGGTACTCTGGTGGGGGATGCATGTCATTACATCACCTCATGGATGTaGTGGCAGAAGGCAGGCACT +
Preference number: 4 (lower is better)
Translates to: LGQEMTLYGTLVGDACHYITSWM*WQKAGT
Trigger: AGTGCCTGCCTTCTGCCAGCACATCCATGAGGTGAT...GTAATGACATGCATCCCCCACCAGAGTACCATACAGAGTCATTTCCTGCCCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR GCA 90 bp AAATCTTGGGGACCCTGTAGTTCCCCTCCAAGATTATCTTGCTCTGCCTTTCCTATCACCTCATGGATGTaGTGGCAGAAGGCAGGCACT +
Preference number: 4 (lower is better)
Translates to: KSWGPCSSPPRLSCSAFPITSWM*WQKAGT
Trigger: AGTGCCTGCCTTCTGCCAGCACATCCATGAGGTGAT...AGGAAAGGCAGAGCAAGATAATCTTGGAGGGGAACTACAGGGTCCCCAAGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR GCA 90 bp GTCAGCACCGAGCAACATTGGATATTCACCTGCAGGGTGCTAGGGAACTGTGTGGGGGTCTCCTTATATTaGCCCAGATCATCTCAAACT +
Preference number: 4 (lower is better)
Translates to: VSTEQHWIFTCRVLGNCVGVSLY*PRSSQT
Trigger: AGTTTGAGATGATCTGGGGCAATATAAGGAGACCCC...CACACAGTTCCCTAGCACCCTGCAGGTGAATATCCAATGTTGCTCGGTGCTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR GCA 90 bp TTCCACTCTCTCATCCAGGCGTGGTTGCGTGGGCATACACACTTTATGAAAATTGCATTTATTCACCCCTaGGGCAAGGCTGGGCAGTAC +
Preference number: 4 (lower is better)
Translates to: FHSLIQAWLRGHTHFMKIAFIHP*GKAGQY
Trigger: GTACTGCCCAGCCTTGCCGCAGGGGTGAATAAATGC...AATTTTCATAAAGTGTGTATGCCCACGCAACCACGCCTGGATGAGAGAGTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR GCA 90 bp CACTGTCAGCACCGAGCAACATTGGATATTCACCTGCAGGGTGCTAGGGAACTGAACAGTCAAAGAAAATaGCGCTCTCTGGGCAAGAGA +
Preference number: 4 (lower is better)
Translates to: HCQHRATLDIHLQGARELNSQRK*RSLGKR
Trigger: TCTCTTGCCCAGAGAGCGGCATTTTCTTTGACTGTT...CAGTTCCCTAGCACCCTGCAGGTGAATATCCAATGTTGCTCGGTGCTGACAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CCA 90 bp CTGGGCAAGAGCAGGGAGAGAGAAGTTTATGAGGAAACTGAACAGGGGCCGGGCATTTCTAAGTCATCATaGCTCGAGTGGCACATTTCA +
Preference number: 4 (lower is better)
Translates to: LGKSREREVYEETEQGPGISKSS*LEWHIS
Trigger: TGAAATGTGCCACTCGAGCCATGATGACTTAGAAAT...GCCCGGCCCCTGTTCAGTTTCCTCATAAACTTCTCTCTCCCTGCTCTTGCCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CCA 90 bp ACAGGTGAGATGCTGATTGGTGAGACCTCCCTCAGGGAAGACGAGGAGGAGGTAGAATGGTTATCCAGATaGATGAGAACAGGCTTGATG +
Preference number: 4 (lower is better)
Translates to: TGEMLIGETSLREDEEEVEWLSR*MRTGLM
Trigger: CATCAAGCCTGTTCTCATCCATCTGGATAACCATTC...TACCTCCTCCTCGTCTTCCCTGAGGGAGGTCTCACCAATCAGCATCTCACCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR CCA 90 bp GATACATACGGAAGCAACACTATGAAAGCTGTTCTCACCCTTATCTCTCCAGTTACATCTCCAGTACTGTaGGCCCCACAGAGCCGGTGG +
Preference number: 4 (lower is better)
Translates to: DTYGSNTMKAVLTLISPVTSPVL*APQSRW
Trigger: CCACCGGCTCTGTGGGGCCCACAGTACTGGAGATGT...AACTGGAGAGATAAGGGTGAGAACAGCTTTCATAGTGTTGCTTCCGTATGTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CCA 90 bp CTGGATGATGACAGTGTTCCACTCTCTCATCCAGGCGTGGTTGCGTGGGCATACTTTAGCAGCATAATCTaGGTCAGACGGTTCCTATTC +
Preference number: 4 (lower is better)
Translates to: LDDDSVPLSHPGVVAWAYFSSII*VRRFLF
Trigger: GAATAGGAACCGTCTGACCCAGATTATGCTGCTAAA...GTATGCCCACGCAACCACGCCTGGATGAGAGAGTGGAACACTGTCATCATCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CCA 90 bp ACAGGTGAGATGCTGATTGGTGAGACCTCCCTCAGGGAAGACGAGGAGGAGGTATTTAGCAGCATAATCTaGGTCAGACGGTTCCTATTC +
Preference number: 4 (lower is better)
Translates to: TGEMLIGETSLREDEEEVFSSII*VRRFLF
Trigger: GAATAGGAACCGTCTGACCCAGATTATGCTGCTAAA...TACCTCCTCCTCGTCTTCCCTGAGGGAGGTCTCACCAATCAGCATCTCACCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR CCA 90 bp CACCTTGGCTTAGCCTGGGAGGCGCTGCCATCTAAGGTGATGTTTTCTCAGAGAATCATGTTGTTGCACTaGAAACCTGTGGATACCTGC +
Preference number: 4 (lower is better)
Translates to: HLGLAWEALPSKVMFSQRIMLLH*KPVDTC
Trigger: GCAGGTATCCACAGGTTTCCAGTGCAACAACATGAT...TCTCTGAGAAAACATCACCTTAGATGGCAGCGCCTCCCAGGCTAAGCCAAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR CCA 90 bp CTCAACCCAGAAGCTCCAGGAACACCTTGGGACCCTCAGAAGAAAGACATCAAATCACTGATCTTGCTCTaGCGGAAGAGGAGCTCAATG +
Preference number: 4 (lower is better)
Translates to: LNPEAPGTPWDPQKKDIKSLILL*RKRSSM
Trigger: CATTGAGCTCCTCTTCCGCCAGAGCAAGATCAGTGA...TTTGATGTCTTTCTTCTGAGGGTCCCAAGGTGTTCCTGGAGCTTCTGGGTTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CCA 90 bp GACCGGTGGAGAGGAAACAGCAGAATCTATGCAGAATGGGAACCTGCACCTTTTTCACTGATCTTGCTCTaGCGGAAGAGGAGCTCAATG +
Preference number: 4 (lower is better)
Translates to: DRWRGNSRIYAEWEPAPFSLILL*RKRSSM
Trigger: CATTGAGCTCCTCTTCCGCCAGAGCAAGATCAGTGA...AAAAGGTGCAGGTTCCCATTCTGCATAGATTCTGCTGTTTCCTCTCCACCGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR CCA 90 bp CATGATTCTCTGCCCCTGGCTGACACAAGAGAAGACAAAGAGGGCACAGGTGAGCAATGCTCCTCCTCTTaGATAAACGATCCTCATCTG +
Preference number: 4 (lower is better)
Translates to: HDSLPLADTREDKEGTGEQCSSS*INDPHL
Trigger: CAGATGAGGATCGTTTATCCAAGAGGAGGAGCATTG...CTCACCTGTGCCCTCTTTGTCTTCTCTTGTGTCAGCCAGGGGCAGAGAATCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CCA 90 bp CACCTTGGCTTAGCCTGGGAGGCGCTGCCATCTAAGGTGATGTTTTCTCAGAGACTACGCTGTCCACAATaGCTTTCTTCAGTGTCTCAT +
Preference number: 4 (lower is better)
Translates to: HLGLAWEALPSKVMFSQRLRCPQ*LSSVSH
Trigger: ATGAGACACTGAAGAAAGCCATTGTGGACAGCGTAG...TCTCTGAGAAAACATCACCTTAGATGGCAGCGCCTCCCAGGCTAAGCCAAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR CCA 90 bp AGATTTGGGGTAAGGGGCCACTCTAACCAGAAGATTTCTAGGGTTAATGGGATGGTGAGGTTCTGTCAGTaGCACCCCGGGAGACACAAA +
Preference number: 4 (lower is better)
Translates to: RFGVRGHSNQKISRVNGMVRFCQ*HPGRHK
Trigger: TTTGTGTCTCCCGGGGTGCCACTGACAGAACCTCAC...CATCCCATTAACCCTAGAAATCTTCTGGTTAGAGTGGCCCCTTACCCCAAATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR CCA 90 bp GATGTGGGCAAATCTTGGGGACCCTGTAGTTCCCCTCCAAGATTATCTTGCTCTGTCTCTCATCCAAGCTaGGTGCAGGATAAAACCTGG +
Preference number: 4 (lower is better)
Translates to: DVGKSWGPCSSPPRLSCSVSHPS*VQDKTW
Trigger: CCAGGTTTTATCCTGCACCCAGCTTGGATGAGAGAC...AGAGCAAGATAATCTTGGAGGGGAACTACAGGGTCCCCAAGATTTGCCCACATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR CCA 90 bp GTAGTTCCCCTCCAAGATTATCTTGCTCTGCCTTTCCTCAACCCAGAAGCTCCAGGGCTACAGCATTTGTaGATTCACAACTCTGCCTCC +
Preference number: 4 (lower is better)
Translates to: VVPLQDYLALPFLNPEAPGLQHL*IHNSAS
Trigger: GGAGGCAGAGTTGTGAATCCACAAATGCTGTAGCCC...TGGAGCTTCTGGGTTGAGGAAAGGCAGAGCAAGATAATCTTGGAGGGGAACTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR CCA 90 bp TTAGGGCAGGAAATGACTCTGTATGGTACTCTGGTGGGGGATGCATGTCATTACCGATGCCTAACGCATTaGAGGTTCCCAGTCCTTGGA +
Preference number: 4 (lower is better)
Translates to: LGQEMTLYGTLVGDACHYRCLTH*RFPVLG
Trigger: TCCAAGGACTGGGAACCTCCAATGCGTTAGGCATCG...GTAATGACATGCATCCCCCACCAGAGTACCATACAGAGTCATTTCCTGCCCTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CCA 90 bp CATTTTACTTGTCCAATTAGCCCAAGTCAGAGCTTCCTTCCGTGGGAAGGTTCTCAGACTATGCATGGCTaGGAATGCCAGGCACCAGGA +
Preference number: 4 (lower is better)
Translates to: HFTCPISPSQSFLPWEGSQTMHG*ECQAPG
Trigger: TCCTGGTGCCTGGCATTCCCAGCCATGCATAGTCTG...AGAACCTTCCCACGGAAGGAAGCTCTGACTTGGGCTAATTGGACAAGTAAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CCA 90 bp TTTACTTGTCCAATTAGCCCAAGTCAGAGCTTCCTTCCGTGGGAAGGTTCTGGAACGGGCCAGAGCAGGTaGGGAAAAATGAAATGGCAG +
Preference number: 4 (lower is better)
Translates to: FTCPISPSQSFLPWEGSGTGQSR*GKMKWQ
Trigger: CTGCCATTTCATTTTTCCCCACCTGCTCTGGCCCGT...TCCAGAACCTTCCCACGGAAGGAAGCTCTGACTTGGGCTAATTGGACAAGTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CCA 90 bp TTTACTTGTCCAATTAGCCCAAGTCAGAGCTTCCTTCCGTGGGAAGGTTCTGGAGAAAATGCCGCTCTCTaGGCAAGAGAGAAGGGATGC +
Preference number: 4 (lower is better)
Translates to: FTCPISPSQSFLPWEGSGENAAL*AREKGC
Trigger: GCATCCCTTCTCTCTTGCCCAGAGAGCGGCATTTTC...TCCAGAACCTTCCCACGGAAGGAAGCTCTGACTTGGGCTAATTGGACAAGTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR CAA 72 bp GGACACAGACACATTACGAGATATGGGCTACAGCATTaGTGGATTCACAACTCTGCCTCCACGCGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: GHRHITRYGLQH*WIHNSASTRQK
Trigger: TTTCTGGCGCGTGGAGGCAGAGTTGTGAATCCACAAATGCTGTAGCCCATATCTCGTAATGTGTCTGTGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR TCA 90 bp GATACATACGGAAGCAACACTATGAAAGCTGTTCTCACCCTTATCTCTCCAGTTACCCCATCAAGATTCTaGGACAGCCTGGGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: DTYGSNTMKAVLTLISPVTPSRF*DSLGLS
Trigger: GGAGAGGCCCAGGCTGTCTCAGAATCTTGATGGGGT...AACTGGAGAGATAAGGGTGAGAACAGCTTTCATAGTGTTGCTTCCGTATGTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR TCA 90 bp GTAGTTCCCCTCCAAGATTATCTTGCTCTGCCTTTCCTCAACCCAGAAGCTCCAAAGTTTTTCTGGAGCTaGGAGGGCATAGAAGGTCAG +
Preference number: 4 (lower is better)
Translates to: VVPLQDYLALPFLNPEAPKFFWS*EGIEGQ
Trigger: CTGACCTTCTATGCCCTCTCAGCTCCAGAAAAACTT...TGGAGCTTCTGGGTTGAGGAAAGGCAGAGCAAGATAATCTTGGAGGGGAACTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR TCA 90 bp GTAGTTCCCCTCCAAGATTATCTTGCTCTGCCTTTCCTCAACCCAGAAGCTCCACAGGGAGAGAACGTCTaGCACTCACATCTTACTGTA +
Preference number: 4 (lower is better)
Translates to: VVPLQDYLALPFLNPEAPQGENV*HSHLTV
Trigger: TACAGTAAGATGTGAGTGTCAGACGTTCTCTCCCTG...TGGAGCTTCTGGGTTGAGGAAAGGCAGAGCAAGATAATCTTGGAGGGGAACTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR TCA 90 bp AGAGGAATTGGGAAAAATAGACTCACTTCTGCAGGGCACTCTCTGTCACCAGGTGAAACGTGTTCTGTGTaGTCTAGAACACCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: RGIGKNRLTSAGHSLSPGETCSV*SRTPRA
Trigger: TGCCCTGGGTGTTCTAGATCACACAGAACACGTTTC...ACCTGGTGACAGAGAGTGCCCTGCAGAAGTGAGTCTATTTTTCCCAATTCCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR TCA 90 bp ACTTATCCTCTGTACGTCCATCCATTCATCCACTGTCAGCACCGAGCAACATTGGAAGGGAAGTATCTATaGCGCATACGTGGGGAGAGT +
Preference number: 4 (lower is better)
Translates to: TYPLYVHPFIHCQHRATLEGKYL*RIRGES
Trigger: ACTCTCCCCACGTATGCGTCATAGATACTTCCCTTC...CAATGTTGCTCGGTGCTGACAGTGGATGAATGGATGGACGTACAGAGGATAAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR TCA 90 bp TTCCACTCTCTCATCCAGGCGTGGTTGCGTGGGCATACACACTTTATGAAAATTCAGCCTGTCCATGCCTaGGGACCATGTAAGTCTTTC +
Preference number: 4 (lower is better)
Translates to: FHSLIQAWLRGHTHFMKIQPVHA*GPCKSF
Trigger: GAAAGACTTACATGGTCCTCAGGCATGGACAGGCTG...AATTTTCATAAAGTGTGTATGCCCACGCAACCACGCCTGGATGAGAGAGTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR TCA 90 bp GTCAGCACCGAGCAACATTGGATATTCACCTGCAGGGTGCTAGGGAACTGTGTGGGCATACACACTTTATaGAAATTCACTGAGTCGTGC +
Preference number: 4 (lower is better)
Translates to: VSTEQHWIFTCRVLGNCVGIHTL*KFTESC
Trigger: GCACGACTCAGTGAATTTTCATAAAGTGTGTATGCC...CACACAGTTCCCTAGCACCCTGCAGGTGAATATCCAATGTTGCTCGGTGCTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR GCA 90 bp ATCTATGACGCATACGTGGGGAGAGTCAGTACAAGTGTGGAATTACTCGAGAAATTCCTCACCACCCCTTaGAGGCCTTTGATGCCTGAC +
Preference number: 4 (lower is better)
Translates to: IYDAYVGRVSTSVELLEKFLTTP*RPLMPD
Trigger: GTCAGGCATCAAAGGCCTGCAAGGGGTGGTGAGGAA...TTTCTCGAGTAATTCCACACTTGTACTGACTCTCCCCACGTATGCGTCATAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR GCA 90 bp CTCAACCCAGAAGCTCCAGGAACACCTTGGGACCCTCAGAAGAAAGACATCAAAAAACCTGTGGATACCTaGAGGAGGGATTTTAGCAGC +
Preference number: 4 (lower is better)
Translates to: LNPEAPGTPWDPQKKDIKKPVDT*RRDFSS
Trigger: GCTGCTAAAATCCCTCCTGCAGGTATCCACAGGTTT...TTTGATGTCTTTCTTCTGAGGGTCCCAAGGTGTTCCTGGAGCTTCTGGGTTGAG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR GCA 90 bp CACCTTGGCTTAGCCTGGGAGGCGCTGCCATCTAAGGTGATGTTTTCTCAGAGACTGACATCATGTTGTTaGACTGGAAACCTGTGGATA +
Preference number: 4 (lower is better)
Translates to: HLGLAWEALPSKVMFSQRLTSCC*TGNLWI
Trigger: TATCCACAGGTTTCCAGTGCAACAACATGATGTCAG...TCTCTGAGAAAACATCACCTTAGATGGCAGCGCCTCCCAGGCTAAGCCAAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR GCA 90 bp GATGTGGGCAAATCTTGGGGACCCTGTAGTTCCCCTCCAAGATTATCTTGCTCTAAAGAGTCGAATTTCTaGATCCTCCATGAGGGCGGT +
Preference number: 4 (lower is better)
Translates to: DVGKSWGPCSSPPRLSCSKESNF*ILHEGG
Trigger: ACCGCCCTCATGGAGGATGCAGAAATTCGACTCTTT...AGAGCAAGATAATCTTGGAGGGGAACTACAGGGTCCCCAAGATTTGCCCACATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR GCA 90 bp TGGCTCTGTAGCTGTGTAAGCATTTCGCCTTGCGCTTCTGAGTCACTTCACTCCAGATGGTCTCTCCAATaGTCCTCCTCTTGGATAAAC +
Preference number: 4 (lower is better)
Translates to: WLCSCVSISPCASESLHSRWSLQ*SSSWIN
Trigger: GTTTATCCAAGAGGAGGAGCATTGGAGAGACCATCT...GGAGTGAAGTGACTCAGAAGCGCAAGGCGAAATGCTTACACAGCTACAGAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR GCA 90 bp GTAGTTCCCCTCCAAGATTATCTTGCTCTGCCTTTCCTCAACCCAGAAGCTCCACCTCCAAGATTATCTTaGTCTGCCTTTCCTCAACCC +
Preference number: 4 (lower is better)
Translates to: VVPLQDYLALPFLNPEAPPPRLS*SAFPQP
Trigger: GGGTTGAGGAAAGGCAGAGCAAGATAATCTTGGAGG...TGGAGCTTCTGGGTTGAGGAAAGGCAGAGCAAGATAATCTTGGAGGGGAACTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR GCA 90 bp TGGCCTATTTGGCCAGAATCCAGGTTCTACTCCATGTCAGCAGACAACCCAACACCTCCAAGATTATCTTaGTCTGCCTTTCCTCAACCC +
Preference number: 4 (lower is better)
Translates to: WPIWPESRFYSMSADNPTPPRLS*SAFPQP
Trigger: GGGTTGAGGAAAGGCAGAGCAAGATAATCTTGGAGG...TGTTGGGTTGTCTGCTGACATGGAGTAGAACCTGGATTCTGGCCAAATAGGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR GCA 90 bp AGATTTGGGGTAAGGGGCCACTCTAACCAGAAGATTTCTAGGGTTAATGGGATGCAGATCCCATCAAACTaGTTTGCCTCTCTCCCAGGG +
Preference number: 4 (lower is better)
Translates to: RFGVRGHSNQKISRVNGMQIPSN*FASLPG
Trigger: CCCTGGGAGAGAGGCAAAGCAGTTTGATGGGATCTG...CATCCCATTAACCCTAGAAATCTTCTGGTTAGAGTGGCCCCTTACCCCAAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR GCA 90 bp TTAGGGCAGGAAATGACTCTGTATGGTACTCTGGTGGGGGATGCATGTCATTACTCAGATGTGGCATTCTaGACTAGCAAAGGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: LGQEMTLYGTLVGDACHYSDVAF*TSKGLE
Trigger: CTCCAGGCCTTTGCTAGTGCAGAATGCCACATCTGA...GTAATGACATGCATCCCCCACCAGAGTACCATACAGAGTCATTTCCTGCCCTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CCA 90 bp CCTGAGAGACACCCCATGATTCTCTGCCCCTGGCTGACACAAGAGAAGACAAAGGAATGGTTATCCAGATaGATGAGAACAGGCTTGATG +
Preference number: 4 (lower is better)
Translates to: PERHPMILCPWLTQEKTKEWLSR*MRTGLM
Trigger: CATCAAGCCTGTTCTCATCCATCTGGATAACCATTC...CTTTGTCTTCTCTTGTGTCAGCCAGGGGCAGAGAATCATGGGGTGTCTCTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CCA 90 bp CCTGAGAGACACCCCATGATTCTCTGCCCCTGGCTGACACAAGAGAAGACAAAGGGTTCCCAAAGAGAATaGTTATCCAGATGGATGAGA +
Preference number: 4 (lower is better)
Translates to: PERHPMILCPWLTQEKTKGSQRE*LSRWMR
Trigger: TCTCATCCATCTGGATAACCATTCTCTTTGGGAACC...CTTTGTCTTCTCTTGTGTCAGCCAGGGGCAGAGAATCATGGGGTGTCTCTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CCA 90 bp GTAGTTCCCCTCCAAGATTATCTTGCTCTGCCTTTCCTCAACCCAGAAGCTCCAGGATGGCAAACACCTTaGGTTCCCAAAGAGAATGGT +
Preference number: 4 (lower is better)
Translates to: VVPLQDYLALPFLNPEAPGWQTP*VPKENG
Trigger: ACCATTCTCTTTGGGAACCCAAGGTGTTTGCCATCC...TGGAGCTTCTGGGTTGAGGAAAGGCAGAGCAAGATAATCTTGGAGGGGAACTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CCA 90 bp ACTTATCCTCTGTACGTCCATCCATTCATCCACTGTCAGCACCGAGCAACATTGGATTCTGAGACAGCCTaGGCCTCTCCACAAACACAT +
Preference number: 4 (lower is better)
Translates to: TYPLYVHPFIHCQHRATLDSETA*ASPQTH
Trigger: ATGTGTTTGTGGAGAGGCCCAGGCTGTCTCAGAATC...CAATGTTGCTCGGTGCTGACAGTGGATGAATGGATGGACGTACAGAGGATAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CCA 90 bp GTAGTTCCCCTCCAAGATTATCTTGCTCTGCCTTTCCTCAACCCAGAAGCTCCATCAGCTTCTCCATGTTaGTCTTCACCAGACCATCCT +
Preference number: 4 (lower is better)
Translates to: VVPLQDYLALPFLNPEAPSASPC*SSPDHP
Trigger: AGGATGGTCTGGTGAAGACCAACATGGAGAAGCTGA...TGGAGCTTCTGGGTTGAGGAAAGGCAGAGCAAGATAATCTTGGAGGGGAACTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CCA 90 bp CCAAGATTATCTTGCTCTGCCTTTCCTCAACCCAGAAGCTCCAGGAACACCTTGATGATTCTCTGCCCCTaGCTGACACAAGAGAAGACA +
Preference number: 4 (lower is better)
Translates to: PRLSCSAFPQPRSSRNTLMILCP*LTQEKT
Trigger: TGTCTTCTCTTGTGTCAGCCAGGGGCAGAGAATCAT...CAAGGTGTTCCTGGAGCTTCTGGGTTGAGGAAAGGCAGAGCAAGATAATCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CCA 90 bp CTTTCCCACAGGACCCCAACCGGCCAGCTGCCATTTTCTGGTCATGAAGAGGAAACACATTACGAGATATaGGCTACAGCATTTGTGGAT +
Preference number: 4 (lower is better)
Translates to: LSHRTPTGQLPFSGHEEETHYEI*ATAFVD
Trigger: ATCCACAAATGCTGTAGCCCATATCTCGTAATGTGT...TTCCTCTTCATGACCAGAAAATGGCAGCTGGCCGGTTGGGGTCCTGTGGGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR CCA 90 bp GTAGTTCCCCTCCAAGATTATCTTGCTCTGCCTTTCCTCAACCCAGAAGCTCCAATCGTGATGGCTCACTaGGAGATCGCGACTAATAGT +
Preference number: 4 (lower is better)
Translates to: VVPLQDYLALPFLNPEAPIVMAH*EIATNS
Trigger: ACTATTAGTCGCGATCTCCCAGTGAGCCATCACGAT...TGGAGCTTCTGGGTTGAGGAAAGGCAGAGCAAGATAATCTTGGAGGGGAACTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR CCA 90 bp CTGTATGGTACTCTGGTGGGGGATGCATGTCATTACGCATTTGTCCAAACCCACTGTATGGTACTCTGGTaGGGGATGCATGTCATTACG +
Preference number: 4 (lower is better)
Translates to: LYGTLVGDACHYAFVQTHCMVLW*GMHVIT
Trigger: CGTAATGACATGCATCCCCCACCAGAGTACCATACA...GTGGGTTTGGACAAATGCGTAATGACATGCATCCCCCACCAGAGTACCATACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CCA 90 bp CATTTTACTTGTCCAATTAGCCCAAGTCAGAGCTTCCTTCCGTGGGAAGGTTCTGGGTCTCTTACCTCTTaGGAAGGGAGAATCGCCACT +
Preference number: 4 (lower is better)
Translates to: HFTCPISPSQSFLPWEGSGSLTS*EGRIAT
Trigger: AGTGGCGATTCTCCCTTCCCAAGAGGTAAGAGACCC...AGAACCTTCCCACGGAAGGAAGCTCTGACTTGGGCTAATTGGACAAGTAAAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CCA 90 bp TTCCACTCTCTCATCCAGGCGTGGTTGCGTGGGCATACACACTTTATGAAAATTGTGTGGAGGGAAGGGTaGTTCAGATGTGGCATTCTG +
Preference number: 4 (lower is better)
Translates to: FHSLIQAWLRGHTHFMKIVWREG*FRCGIL
Trigger: CAGAATGCCACATCTGAACCACCCTTCCCTCCACAC...AATTTTCATAAAGTGTGTATGCCCACGCAACCACGCCTGGATGAGAGAGTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CCA 90 bp CACCTTGGCTTAGCCTGGGAGGCGCTGCCATCTAAGGTGATGTTTTCTCAGAGATGTCCTCCTCGATGTTaGCAAACTTCACAAACACTT +
Preference number: 4 (lower is better)
Translates to: HLGLAWEALPSKVMFSQRCPPRC*QTSQTL
Trigger: AAGTGTTTGTGAAGTTTGCCAACATCGAGGAGGACA...TCTCTGAGAAAACATCACCTTAGATGGCAGCGCCTCCCAGGCTAAGCCAAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405108.5
3UTR CAA 72 bp ATCACACTCACCTTCACCTTTCCGATTCTGGCCTATTaGGCCAGAATCCAGGTTCTACTCCATGTCAGCAGA +
Preference number: 4 (lower is better)
Translates to: ITLTFTFPILAY*ARIQVLLHVSR
Trigger: TCTGCTGACATGGAGTAGAACCTGGATTCTGGCCAAATAGGCCAGAATCGGAAAGGTGAAGGTGAGTGTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR TCA 90 bp GATGTGGGCAAATCTTGGGGACCCTGTAGTTCCCCTCCAAGATTATCTTGCTCTAGTGGCACATTTCACTaGATCGGGACACAAAGAAGT +
Preference number: 4 (lower is better)
Translates to: DVGKSWGPCSSPPRLSCSSGTFH*IGTQRS
Trigger: ACTTCTTTGTGTCCCGATTCAGTGAAATGTGCCACT...AGAGCAAGATAATCTTGGAGGGGAACTACAGGGTCCCCAAGATTTGCCCACATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR TCA 90 bp CCAAGATTATCTTGCTCTGCCTTTCCTCAACCCAGAAGCTCCAGGAACACCTTGCAGGCCTTTGATGCCTaGCATTCGAATTTTGGTCTT +
Preference number: 4 (lower is better)
Translates to: PRLSCSAFPQPRSSRNTLQAFDA*HSNFGL
Trigger: AAGACCAAAATTCGAATGTCAGGCATCAAAGGCCTG...CAAGGTGTTCCTGGAGCTTCTGGGTTGAGGAAAGGCAGAGCAAGATAATCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR TCA 90 bp CACCTTGGCTTAGCCTGGGAGGCGCTGCCATCTAAGGTGATGTTTTCTCAGAGAGTGCTGCGGCTGAATTaGGTACATGATGATTTTAAA +
Preference number: 4 (lower is better)
Translates to: HLGLAWEALPSKVMFSQRVLRLN*VHDDFK
Trigger: TTTAAAATCATCATGTACTCAATTCAGCCGCAGCAC...TCTCTGAGAAAACATCACCTTAGATGGCAGCGCCTCCCAGGCTAAGCCAAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR TCA 90 bp GATACATACGGAAGCAACACTATGAAAGCTGTTCTCACCCTTATCTCTCCAGTTGCCTCAGCAGCGTGTTaGACATCTCCAGTACTGTGG +
Preference number: 4 (lower is better)
Translates to: DTYGSNTMKAVLTLISPVASAAC*TSPVLW
Trigger: CCACAGTACTGGAGATGTTCAACACGCTGCTGAGGC...AACTGGAGAGATAAGGGTGAGAACAGCTTTCATAGTGTTGCTTCCGTATGTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR TCA 90 bp TCCAAGATTATCTTGCTCTGCCTTTCCTCAACCCAGAAGCTCCAGGAACACCTTTTGTGGCGGTTGCCATaGCGATCAATGAAACTGATG +
Preference number: 4 (lower is better)
Translates to: SKIILLCLSSTQKLQEHLLWRLP*RSMKLM
Trigger: CATCAGTTTCATTGATCGTCATGGCAACCGCCACAA...AAGGTGTTCCTGGAGCTTCTGGGTTGAGGAAAGGCAGAGCAAGATAATCTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR TCA 90 bp ATTACGAGATATGGGCTACAGCATTTGTGGATTCACAACTCTGCCTCCACGCGCGAGTTATGGGAAATGTaGCTAACGGAGAAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: ITRYGLQHLWIHNSASTRELWEM*LTEKER
Trigger: CCTTTCCTTCTCCGTTAGTCACATTTCCCATAACTC...GCGCGTGGAGGCAGAGTTGTGAATCCACAAATGCTGTAGCCCATATCTCGTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR TCA 90 bp AAATCTTGGGGACCCTGTAGTTCCCCTCCAAGATTATCTTGCTCTGCCTTTCCTCCATGCCACACTGCCTaGAATTGTACCCTAAAAAGG +
Preference number: 4 (lower is better)
Translates to: KSWGPCSSPPRLSCSAFPPCHTA*NCTLKR
Trigger: CCTTTTTAGGGTACAATTTCAGGCAGTGTGGCATGG...AGGAAAGGCAGAGCAAGATAATCTTGGAGGGGAACTACAGGGTCCCCAAGATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR TCA 90 bp GCAGCCGGTCTCAATGGGCTTACTGACTCCTCTTCGCTCAAAATCACATCAGAGAGGAAGAGCTTCATTTaGAGTGCCAAAACTATGGGA +
Preference number: 4 (lower is better)
Translates to: AAGLNGLTDSSSLKITSERKSFI*SAKTMG
Trigger: TCCCATAGTTTTGGCACTTCAAATGAAGCTCTTCCT...CTCTGATGTGATTTTGAGCGAAGAGGAGTCAGTAAGCCCATTGAGACCGGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR TCA 90 bp CTGTATGGTACTCTGGTGGGGGATGCATGTCATTACGCATTTGTCCAAACCCACCCTCCGTACTTCTTGTaGACTGTAACAGTCAGCATT +
Preference number: 4 (lower is better)
Translates to: LYGTLVGDACHYAFVQTHPPYFL*TVTVSI
Trigger: AATGCTGACTGTTACAGTTCACAAGAAGTACGGAGG...GTGGGTTTGGACAAATGCGTAATGACATGCATCCCCCACCAGAGTACCATACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR TCA 90 bp TTCCACTCTCTCATCCAGGCGTGGTTGCGTGGGCATACACACTTTATGAAAATTATCTGCCCCAATAAATaGAGTGGTCGAGGGCACAGT +
Preference number: 4 (lower is better)
Translates to: FHSLIQAWLRGHTHFMKIICPNK*SGRGHS
Trigger: ACTGTGCCCTCGACCACTTCATTTATTGGGGCAGAT...AATTTTCATAAAGTGTGTATGCCCACGCAACCACGCCTGGATGAGAGAGTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR TCA 90 bp GCATCTGGGGAAAGGCTTGATGTCAAAGCTGTCCTCCATGTCTATATCAGCCCTATGCAGGACTGTAGGTaGGTCTATAGAAACTGCACA +
Preference number: 4 (lower is better)
Translates to: ASGERLDVKAVLHVYISPMQDCR*VYRNCT
Trigger: TGTGCAGTTTCTATAGACTCACCTACAGTCCTGCAT...AGGGCTGATATAGACATGGAGGACAGCTTTGACATCAAGCCTTTCCCCAGATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR GCA 90 bp TTCCACTCTCTCATCCAGGCGTGGTTGCGTGGGCATACACACTTTATGAAAATTAACATGCGCTCCTCGTaGTCCTTGATGATCTTGGTG +
Preference number: 4 (lower is better)
Translates to: FHSLIQAWLRGHTHFMKINMRSS*SLMILV
Trigger: CACCAAGATCATCAAGGAGCACGAGGAGCGCATGTT...AATTTTCATAAAGTGTGTATGCCCACGCAACCACGCCTGGATGAGAGAGTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR GCA 90 bp TTTACTTGTCCAATTAGCCCAAGTCAGAGCTTCCTTCCGTGGGAAGGTTCTGGAAAAGAGTCGAATTTCTaGATCCTCCATGAGGGCGGT +
Preference number: 4 (lower is better)
Translates to: FTCPISPSQSFLPWEGSGKESNF*ILHEGG
Trigger: ACCGCCCTCATGGAGGATGCAGAAATTCGACTCTTT...TCCAGAACCTTCCCACGGAAGGAAGCTCTGACTTGGGCTAATTGGACAAGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR GCA 90 bp AGAGGAATTGGGAAAAATAGACTCACTTCTGCAGGGCACTCTCTGTCACCAGGTAAAGAGTCGAATTTCTaGATCCTCCATGAGGGCGGT +
Preference number: 4 (lower is better)
Translates to: RGIGKNRLTSAGHSLSPGKESNF*ILHEGG
Trigger: ACCGCCCTCATGGAGGATGCAGAAATTCGACTCTTT...ACCTGGTGACAGAGAGTGCCCTGCAGAAGTGAGTCTATTTTTCCCAATTCCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR GCA 90 bp TTAGGGCAGGAAATGACTCTGTATGGTACTCTGGTGGGGGATGCATGTCATTACCGTTTGTTTCCTCCTTaGAGCTCAGGTAGATGTGTC +
Preference number: 4 (lower is better)
Translates to: LGQEMTLYGTLVGDACHYRLFPP*SSGRCV
Trigger: GACACATCTACCTGAGCTGCAAGGAGGAAACAAACG...GTAATGACATGCATCCCCCACCAGAGTACCATACAGAGTCATTTCCTGCCCTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR GCA 90 bp AGAGGAATTGGGAAAAATAGACTCACTTCTGCAGGGCACTCTCTGTCACCAGGTGCGTTAGCTCCTCTCTaGACATCCTCATTACACAGA +
Preference number: 4 (lower is better)
Translates to: RGIGKNRLTSAGHSLSPGALAPL*TSSLHR
Trigger: TCTGTGTAATGAGGATGTGCAGAGAGGAGCTAACGC...ACCTGGTGACAGAGAGTGCCCTGCAGAAGTGAGTCTATTTTTCCCAATTCCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR GCA 90 bp GACCGGTGGAGAGGAAACAGCAGAATCTATGCAGAATGGGAACCTGCACCTTTTCATATTAATGGGAAATaGTCGTGTTCAGTCCCTCCC +
Preference number: 4 (lower is better)
Translates to: DRWRGNSRIYAEWEPAPFHINGK*SCSVPP
Trigger: GGGAGGGACTGAACACGAGCATTTCCCATTAATATG...AAAAGGTGCAGGTTCCCATTCTGCATAGATTCTGCTGTTTCCTCTCCACCGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR GCA 90 bp CTCAACCCAGAAGCTCCAGGAACACCTTGGGACCCTCAGAAGAAAGACATCAAACTAGTTCTTCTGACCTaGTCAGGCTCCTTCTATAGT +
Preference number: 4 (lower is better)
Translates to: LNPEAPGTPWDPQKKDIKLVLLT*SGSFYS
Trigger: ACTATAGAAGGAGCCTGAGCAGGTCAGAAGAACTAG...TTTGATGTCTTTCTTCTGAGGGTCCCAAGGTGTTCCTGGAGCTTCTGGGTTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR CCA 90 bp GCAAAAGCAGCAGACACAGAACAGAATGATTTCATTGATATAAAGTTCCAGAAGCTGTTGGCGTCCAGGTaGCCCAGGAGCTGCTGGATG +
Preference number: 4 (lower is better)
Translates to: AKAADTEQNDFIDIKFQKLLASR*PRSCWM
Trigger: CATCCAGCAGCTCCTGGGCCACCTGGACGCCAACAG...CTTCTGGAACTTTATATCAATGAAATCATTCTGTTCTGTGTCTGCTGCTTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CCA 90 bp GCAGCCGGTCTCAATGGGCTTACTGACTCCTCTTCGCTCAAAATCACATCAGAGTTTAGCAGCATAATCTaGGTCAGACGGTTCCTATTC +
Preference number: 4 (lower is better)
Translates to: AAGLNGLTDSSSLKITSEFSSII*VRRFLF
Trigger: GAATAGGAACCGTCTGACCCAGATTATGCTGCTAAA...CTCTGATGTGATTTTGAGCGAAGAGGAGTCAGTAAGCCCATTGAGACCGGCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR CCA 90 bp CTCAACCCAGAAGCTCCAGGAACACCTTGGGACCCTCAGAAGAAAGACATCAAAATCATGTTGTTGCACTaGAAACCTGTGGATACCTGC +
Preference number: 4 (lower is better)
Translates to: LNPEAPGTPWDPQKKDIKIMLLH*KPVDTC
Trigger: GCAGGTATCCACAGGTTTCCAGTGCAACAACATGAT...TTTGATGTCTTTCTTCTGAGGGTCCCAAGGTGTTCCTGGAGCTTCTGGGTTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CCA 90 bp TGGCCTATTTGGCCAGAATCCAGGTTCTACTCCATGTCAGCAGACAACCCAACATGTCCTCCTCGATGTTaGCAAACTTCACAAACGAGT +
Preference number: 4 (lower is better)
Translates to: WPIWPESRFYSMSADNPTCPPRC*QTSQTS
Trigger: ACTCGTTTGTGAAGTTTGCCAACATCGAGGAGGACA...TGTTGGGTTGTCTGCTGACATGGAGTAGAACCTGGATTCTGGCCAAATAGGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR CCA 90 bp GATACATACGGAAGCAACACTATGAAAGCTGTTCTCACCCTTATCTCTCCAGTTGGAGAATCGCCACTATaGGGAGAGAGCAGCCAACTC +
Preference number: 4 (lower is better)
Translates to: DTYGSNTMKAVLTLISPVGESPL*GESSQL
Trigger: GAGTTGGCTGCTCTCTCCCCATAGTGGCGATTCTCC...AACTGGAGAGATAAGGGTGAGAACAGCTTTCATAGTGTTGCTTCCGTATGTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CCA 90 bp GCAAAAGCAGCAGACACAGAACAGAATGATTTCATTGATATAAAGTTCCAGAAGGCACTAGCAAAGGCCTaGAGATGGCGGAGCGCAGCG +
Preference number: 4 (lower is better)
Translates to: AKAADTEQNDFIDIKFQKALAKA*RWRSAA
Trigger: CGCTGCGCTCCGCCATCTCCAGGCCTTTGCTAGTGC...CTTCTGGAACTTTATATCAATGAAATCATTCTGTTCTGTGTCTGCTGCTTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR TCA 90 bp CACTGTCAGCACCGAGCAACATTGGATATTCACCTGCAGGGTGCTAGGGAACTGTTCGAATTTTGGTCTTaGTTTCTAAGTCATCATGGC +
Preference number: 4 (lower is better)
Translates to: HCQHRATLDIHLQGARELFEFWS*FLSHHG
Trigger: GCCATGATGACTTAGAAATCAAGACCAAAATTCGAA...CAGTTCCCTAGCACCCTGCAGGTGAATATCCAATGTTGCTCGGTGCTGACAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR TCA 90 bp GCAAAAGCAGCAGACACAGAACAGAATGATTTCATTGATATAAAGTTCCAGAAGGACCCACGTCACGGATaGGCCTCTCAGAGAGGTAGG +
Preference number: 4 (lower is better)
Translates to: AKAADTEQNDFIDIKFQKDPRHG*ASQRGR
Trigger: CCTACCTCTCTGAGAGGCTCATCCGTGACGTGGGTC...CTTCTGGAACTTTATATCAATGAAATCATTCTGTTCTGTGTCTGCTGCTTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR TCA 90 bp GTAGTTCCCCTCCAAGATTATCTTGCTCTGCCTTTCCTCAACCCAGAAGCTCCATTCCTGCTCATCCATTaGTATCTGTGTATGGGAAAG +
Preference number: 4 (lower is better)
Translates to: VVPLQDYLALPFLNPEAPFLLIH*YLCMGK
Trigger: CTTTCCCATACACAGATATCAATGGATGAGCAGGAA...TGGAGCTTCTGGGTTGAGGAAAGGCAGAGCAAGATAATCTTGGAGGGGAACTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR GCA 90 bp CATTTTACTTGTCCAATTAGCCCAAGTCAGAGCTTCCTTCCGTGGGAAGGTTCTTCCCAGATATTGGCCTaGAGTTCATCATTCACCGTC +
Preference number: 4 (lower is better)
Translates to: HFTCPISPSQSFLPWEGSSQILA*SSSFTV
Trigger: GACGGTGAATGATGAACTGCAGGCCAATATCTGGGA...AGAACCTTCCCACGGAAGGAAGCTCTGACTTGGGCTAATTGGACAAGTAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR GCA 90 bp CTGTATGGTACTCTGGTGGGGGATGCATGTCATTACGCATTTGTCCAAACCCACTCTGCCTCCTCTACATaGTGTAGATTGAAAAGCAGT +
Preference number: 4 (lower is better)
Translates to: LYGTLVGDACHYAFVQTHSASST*CRLKSS
Trigger: ACTGCTTTTCAATCTACAGCATGTAGAGGAGGCAGA...GTGGGTTTGGACAAATGCGTAATGACATGCATCCCCCACCAGAGTACCATACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR GCA 90 bp GATACATACGGAAGCAACACTATGAAAGCTGTTCTCACCCTTATCTCTCCAGTTTTGGTGCCGAGGATCTaGAGGTTGGGTTTCTCTGAC +
Preference number: 4 (lower is better)
Translates to: DTYGSNTMKAVLTLISPVLVPRI*RLGFSD
Trigger: GTCAGAGAAACCCAACCTGCAGATCCTCGGCACCAA...AACTGGAGAGATAAGGGTGAGAACAGCTTTCATAGTGTTGCTTCCGTATGTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR GCA 90 bp AGATTTGGGGTAAGGGGCCACTCTAACCAGAAGATTTCTAGGGTTAATGGGATGTGCTTTCTGCCGATCTaGCTCTTATCCATTCACCTG +
Preference number: 4 (lower is better)
Translates to: RFGVRGHSNQKISRVNGMCFLPI*LLSIHL
Trigger: CAGGTGAATGGATAAGAGGCAGATCGGCAGAAAGCA...CATCCCATTAACCCTAGAAATCTTCTGGTTAGAGTGGCCCCTTACCCCAAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR CCA 90 bp CATTTTACTTGTCCAATTAGCCCAAGTCAGAGCTTCCTTCCGTGGGAAGGTTCTGTGGGTCCCAGATATTaGCCTGCAGTTCATCATTCA +
Preference number: 4 (lower is better)
Translates to: HFTCPISPSQSFLPWEGSVGPRY*PAVHHS
Trigger: TGAATGATGAACTGCAGGCCAATATCTGGGACCCAC...AGAACCTTCCCACGGAAGGAAGCTCTGACTTGGGCTAATTGGACAAGTAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CCA 90 bp GTAGTTCCCCTCCAAGATTATCTTGCTCTGCCTTTCCTCAACCCAGAAGCTCCAGGTTCCCAAAGAGAATaGTTATCCAGATGGATGAGA +
Preference number: 4 (lower is better)
Translates to: VVPLQDYLALPFLNPEAPGSQRE*LSRWMR
Trigger: TCTCATCCATCTGGATAACCATTCTCTTTGGGAACC...TGGAGCTTCTGGGTTGAGGAAAGGCAGAGCAAGATAATCTTGGAGGGGAACTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CCA 90 bp GTAGTTCCCCTCCAAGATTATCTTGCTCTGCCTTTCCTCAACCCAGAAGCTCCATTTAGCAGCATAATCTaGGTCAGACGGTTCCTATTC +
Preference number: 4 (lower is better)
Translates to: VVPLQDYLALPFLNPEAPFSSII*VRRFLF
Trigger: GAATAGGAACCGTCTGACCCAGATTATGCTGCTAAA...TGGAGCTTCTGGGTTGAGGAAAGGCAGAGCAAGATAATCTTGGAGGGGAACTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CCA 90 bp AAATCTTGGGGACCCTGTAGTTCCCCTCCAAGATTATCTTGCTCTGCCTTTCCTCAATGCTCCTCCTCTTaGATAAACGATCCTCATCTG +
Preference number: 4 (lower is better)
Translates to: KSWGPCSSPPRLSCSAFPQCSSS*INDPHL
Trigger: CAGATGAGGATCGTTTATCCAAGAGGAGGAGCATTG...AGGAAAGGCAGAGCAAGATAATCTTGGAGGGGAACTACAGGGTCCCCAAGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CCA 90 bp TCCAAGATTATCTTGCTCTGCCTTTCCTCAACCCAGAAGCTCCAGGAACACCTTCTACGCTGTCCACAATaGCTTTCTTCAGTGTCTCAT +
Preference number: 4 (lower is better)
Translates to: SKIILLCLSSTQKLQEHLLRCPQ*LSSVSH
Trigger: ATGAGACACTGAAGAAAGCCATTGTGGACAGCGTAG...AAGGTGTTCCTGGAGCTTCTGGGTTGAGGAAAGGCAGAGCAAGATAATCTTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CCA 90 bp ATCTATGACGCATACGTGGGGAGAGTCAGTACAAGTGTGGAATTACTCGAGAAAACTTCACAAACGAGTTaGTGCCGAGGATCTGCAGGT +
Preference number: 4 (lower is better)
Translates to: IYDAYVGRVSTSVELLEKTSQTS*CRGSAG
Trigger: ACCTGCAGATCCTCGGCACCAACTCGTTTGTGAAGT...TTTCTCGAGTAATTCCACACTTGTACTGACTCTCCCCACGTATGCGTCATAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CCA 90 bp AGAGGAATTGGGAAAAATAGACTCACTTCTGCAGGGCACTCTCTGTCACCAGGTTACTGTAGGTTATGTTaGCTCGGAGGAGTTATGGGA +
Preference number: 4 (lower is better)
Translates to: RGIGKNRLTSAGHSLSPGYCRLC*LGGVMG
Trigger: TCCCATAACTCCTCCGAGCCAACATAACCTACAGTA...ACCTGGTGACAGAGAGTGCCCTGCAGAAGTGAGTCTATTTTTCCCAATTCCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR CCA 90 bp AGATTTGGGGTAAGGGGCCACTCTAACCAGAAGATTTCTAGGGTTAATGGGATGGTGCAGGATAAAACCTaGGAGGAGCTAGTGAGGAAA +
Preference number: 4 (lower is better)
Translates to: RFGVRGHSNQKISRVNGMVQDKT*EELVRK
Trigger: TTTCCTCACTAGCTCCTCCCAGGTTTTATCCTGCAC...CATCCCATTAACCCTAGAAATCTTCTGGTTAGAGTGGCCCCTTACCCCAAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR CCA 90 bp AGATTTGGGGTAAGGGGCCACTCTAACCAGAAGATTTCTAGGGTTAATGGGATGCGATTCTGGCCTATTTaGCCAGAATCCAGGTTCTAC +
Preference number: 4 (lower is better)
Translates to: RFGVRGHSNQKISRVNGMRFWPI*PESRFY
Trigger: GTAGAACCTGGATTCTGGCCAAATAGGCCAGAATCG...CATCCCATTAACCCTAGAAATCTTCTGGTTAGAGTGGCCCCTTACCCCAAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR CCA 90 bp GCAAAAGCAGCAGACACAGAACAGAATGATTTCATTGATATAAAGTTCCAGAAGCCCAGTCCTTGGAGCTaGAAGGGCCATGGAGGATGC +
Preference number: 4 (lower is better)
Translates to: AKAADTEQNDFIDIKFQKPSPWS*KGHGGC
Trigger: GCATCCTCCATGGCCCTTCCAGCTCCAAGGACTGGG...CTTCTGGAACTTTATATCAATGAAATCATTCTGTTCTGTGTCTGCTGCTTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CCA 90 bp ACTTATCCTCTGTACGTCCATCCATTCATCCACTGTCAGCACCGAGCAACATTGTGGGGAAAAATGAAATaGCAGAGCCCAGACTATGCA +
Preference number: 4 (lower is better)
Translates to: TYPLYVHPFIHCQHRATLWGKMK*QSPDYA
Trigger: TGCATAGTCTGGGCTCTGCCATTTCATTTTTCCCCA...CAATGTTGCTCGGTGCTGACAGTGGATGAATGGATGGACGTACAGAGGATAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR TCA 90 bp GTAGTTCCCCTCCAAGATTATCTTGCTCTGCCTTTCCTCAACCCAGAAGCTCCAGTGCTGCGGCTGAATTaGGTACATGATGATTTTAAA +
Preference number: 4 (lower is better)
Translates to: VVPLQDYLALPFLNPEAPVLRLN*VHDDFK
Trigger: TTTAAAATCATCATGTACTCAATTCAGCCGCAGCAC...TGGAGCTTCTGGGTTGAGGAAAGGCAGAGCAAGATAATCTTGGAGGGGAACTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR TCA 90 bp GCAAAAGCAGCAGACACAGAACAGAATGATTTCATTGATATAAAGTTCCAGAAGCAGGTTGGGTTTCTCTaGCTCCAGCAGCTTGGCCAC +
Preference number: 4 (lower is better)
Translates to: AKAADTEQNDFIDIKFQKQVGFL*LQQLGH
Trigger: GTGGCCAAGCTGCTGGAGTCAGAGAAACCCAACCTG...CTTCTGGAACTTTATATCAATGAAATCATTCTGTTCTGTGTCTGCTGCTTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR GCA 90 bp GATACATACGGAAGCAACACTATGAAAGCTGTTCTCACCCTTATCTCTCCAGTTCTCAAGCAGTCCTCCTaGCTCAGCCTCCAAAATGTT +
Preference number: 4 (lower is better)
Translates to: DTYGSNTMKAVLTLISPVLKQSS*LSLQNV
Trigger: AACATTTTGGAGGCTGAGGCAGGAGGACTGCTTGAG...AACTGGAGAGATAAGGGTGAGAACAGCTTTCATAGTGTTGCTTCCGTATGTATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR GCA 90 bp ATCTATGACGCATACGTGGGGAGAGTCAGTACAAGTGTGGAATTACTCGAGAAAGTAAGCATTTCGCCTTaGGCTTCTGAGTCACTTCAC +
Preference number: 4 (lower is better)
Translates to: IYDAYVGRVSTSVELLEKVSISP*ASESLH
Trigger: GTGAAGTGACTCAGAAGCGCAAGGCGAAATGCTTAC...TTTCTCGAGTAATTCCACACTTGTACTGACTCTCCCCACGTATGCGTCATAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CCA 90 bp AAATCTTGGGGACCCTGTAGTTCCCCTCCAAGATTATCTTGCTCTGCCTTTCCTGAATGGTTATCCAGATaGATGAGAACAGGCTTGATG +
Preference number: 4 (lower is better)
Translates to: KSWGPCSSPPRLSCSAFPEWLSR*MRTGLM
Trigger: CATCAAGCCTGTTCTCATCCATCTGGATAACCATTC...AGGAAAGGCAGAGCAAGATAATCTTGGAGGGGAACTACAGGGTCCCCAAGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CCA 90 bp GCATCTGGGGAAAGGCTTGATGTCAAAGCTGTCCTCCATGTCTATATCAGCCCTGCACGTCACCATGCCTaGCTGATTTTTCAATTATTT +
Preference number: 4 (lower is better)
Translates to: ASGERLDVKAVLHVYISPARHHA*LIFQLF
Trigger: AAATAATTGAAAAATCAGCCAGGCATGGTGACGTGC...AGGGCTGATATAGACATGGAGGACAGCTTTGACATCAAGCCTTTCCCCAGATGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CCA 90 bp GCAAAAGCAGCAGACACAGAACAGAATGATTTCATTGATATAAAGTTCCAGAAGAATGGGCAGAGAGGCTaGGGAATGCCAGCCTGTCCA +
Preference number: 4 (lower is better)
Translates to: AKAADTEQNDFIDIKFQKNGQRG*GMPACP
Trigger: TGGACAGGCTGGCATTCCCCAGCCTCTCTGCCCATT...CTTCTGGAACTTTATATCAATGAAATCATTCTGTTCTGTGTCTGCTGCTTTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR TCA 90 bp GCAAAAGCAGCAGACACAGAACAGAATGATTTCATTGATATAAAGTTCCAGAAGGCTTGGCCACCATCTTaGGGAAGCTCTCCACGAAGA +
Preference number: 4 (lower is better)
Translates to: AKAADTEQNDFIDIKFQKAWPPS*GSSPRR
Trigger: TCTTCGTGGAGAGCTTCCTCAAGATGGTGGCCAAGC...CTTCTGGAACTTTATATCAATGAAATCATTCTGTTCTGTGTCTGCTGCTTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR GCA 90 bp AGATTTGGGGTAAGGGGCCACTCTAACCAGAAGATTTCTAGGGTTAATGGGATGTCTGCCTCCTCTACATaGTGTAGATTGAAAAGCAGT +
Preference number: 4 (lower is better)
Translates to: RFGVRGHSNQKISRVNGMSASST*CRLKSS
Trigger: ACTGCTTTTCAATCTACAGCATGTAGAGGAGGCAGA...CATCCCATTAACCCTAGAAATCTTCTGGTTAGAGTGGCCCCTTACCCCAAATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR GCA 90 bp TTCCACTCTCTCATCCAGGCGTGGTTGCGTGGGCATACACACTTTATGAAAATTCTGACATCATGTTGTTaGACTGGAAACCTGTGGATA +
Preference number: 4 (lower is better)
Translates to: FHSLIQAWLRGHTHFMKILTSCC*TGNLWI
Trigger: TATCCACAGGTTTCCAGTGCAACAACATGATGTCAG...AATTTTCATAAAGTGTGTATGCCCACGCAACCACGCCTGGATGAGAGAGTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR GCA 90 bp GCAAAAGCAGCAGACACAGAACAGAATGATTTCATTGATATAAAGTTCCAGAAGTCACCTAGGCTGAAGTaGCGTGCTGCCATCATGGCT +
Preference number: 4 (lower is better)
Translates to: AKAADTEQNDFIDIKFQKSPRLK*RAAIMA
Trigger: AGCCATGATGGCAGCACGGCACTTCAGCCTAGGTGA...CTTCTGGAACTTTATATCAATGAAATCATTCTGTTCTGTGTCTGCTGCTTTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR CAA 72 bp CACAGCAGAGATGGTGACCACAAGGAAGAGCTTCATTaGAAGTGCCAAAACTATGGGAATGAGGGTCAAATA +
Preference number: 4 (lower is better)
Translates to: HSRDGDHKEELH*KCQNYGNEGQI
Trigger: TATTTGACCCTCATTCCCATAGTTTTGGCACTTCAAATGAAGCTCTTCCTTGTGGTCACCATCTCTGCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR TCA 90 bp ATCTATGACGCATACGTGGGGAGAGTCAGTACAAGTGTGGAATTACTCGAGAAACTACATGCTGTAGATTaGAAAGCAGTGATGGAACGA +
Preference number: 4 (lower is better)
Translates to: IYDAYVGRVSTSVELLEKLHAVD*KAVMER
Trigger: TCGTTCCATCACTGCTTTTCAATCTACAGCATGTAG...TTTCTCGAGTAATTCCACACTTGTACTGACTCTCCCCACGTATGCGTCATAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR GCA 90 bp GATACATACGGAAGCAACACTATGAAAGCTGTTCTCACCCTTATCTCTCCAGTTGAAACTTGCTTTCCATaGAGCCTTAAGCCCACTATG +
Preference number: 4 (lower is better)
Translates to: DTYGSNTMKAVLTLISPVETCFP*SLKPTM
Trigger: CATAGTGGGCTTAAGGCTGCATGGAAAGCAAGTTTC...AACTGGAGAGATAAGGGTGAGAACAGCTTTCATAGTGTTGCTTCCGTATGTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CCA 90 bp GATACATACGGAAGCAACACTATGAAAGCTGTTCTCACCCTTATCTCTCCAGTTCAATGCTCCTCCTCTTaGATAAACGATCCTCATCTG +
Preference number: 4 (lower is better)
Translates to: DTYGSNTMKAVLTLISPVQCSSS*INDPHL
Trigger: CAGATGAGGATCGTTTATCCAAGAGGAGGAGCATTG...AACTGGAGAGATAAGGGTGAGAACAGCTTTCATAGTGTTGCTTCCGTATGTATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
3UTR CAA 72 bp AATGAGGGTCAAATAGCCCCTTCCCCAAGACATTTATaGCACATATTAATGGGAAATGCTCGTGTTCAGTCC +
Preference number: 4 (lower is better)
Translates to: NEGQIAPSPRHL*HILMGNARVQS
Trigger: GGACTGAACACGAGCATTTCCCATTAATATGTGCAATAAATGTCTTGGGGAAGGGGCTATTTGACCCTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR TCA 90 bp GCAAAAGCAGCAGACACAGAACAGAATGATTTCATTGATATAAAGTTCCAGAAGTTCGCCTTGCGCTTCTaGGTCACTTCACTCCTCAAT +
Preference number: 4 (lower is better)
Translates to: AKAADTEQNDFIDIKFQKFALRF*VTSLLN
Trigger: ATTGAGGAGTGAAGTGACTCAGAAGCGCAAGGCGAA...CTTCTGGAACTTTATATCAATGAAATCATTCTGTTCTGTGTCTGCTGCTTTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CCA 90 bp GATACATACGGAAGCAACACTATGAAAGCTGTTCTCACCCTTATCTCTCCAGTTGAATGGTTATCCAGATaGATGAGAACAGGCTTGATG +
Preference number: 4 (lower is better)
Translates to: DTYGSNTMKAVLTLISPVEWLSR*MRTGLM
Trigger: CATCAAGCCTGTTCTCATCCATCTGGATAACCATTC...AACTGGAGAGATAAGGGTGAGAACAGCTTTCATAGTGTTGCTTCCGTATGTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CCA 90 bp GATACATACGGAAGCAACACTATGAAAGCTGTTCTCACCCTTATCTCTCCAGTTGGTTCCCAAAGAGAATaGTTATCCAGATGGATGAGA +
Preference number: 4 (lower is better)
Translates to: DTYGSNTMKAVLTLISPVGSQRE*LSRWMR
Trigger: TCTCATCCATCTGGATAACCATTCTCTTTGGGAACC...AACTGGAGAGATAAGGGTGAGAACAGCTTTCATAGTGTTGCTTCCGTATGTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CCA 90 bp GCAAAAGCAGCAGACACAGAACAGAATGATTTCATTGATATAAAGTTCCAGAAGCCAGGCGTGGTTGCGTaGGCATACACACTTTATGAA +
Preference number: 4 (lower is better)
Translates to: AKAADTEQNDFIDIKFQKPGVVA*AYTLYE
Trigger: TTCATAAAGTGTGTATGCCCACGCAACCACGCCTGG...CTTCTGGAACTTTATATCAATGAAATCATTCTGTTCTGTGTCTGCTGCTTTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR GCA 90 bp GCAAAAGCAGCAGACACAGAACAGAATGATTTCATTGATATAAAGTTCCAGAAGCATTGGATATTCACCTaGAGGGTGCTAGGGAACTGT +
Preference number: 4 (lower is better)
Translates to: AKAADTEQNDFIDIKFQKHWIFT*RVLGNC
Trigger: ACAGTTCCCTAGCACCCTGCAGGTGAATATCCAATG...CTTCTGGAACTTTATATCAATGAAATCATTCTGTTCTGTGTCTGCTGCTTTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR TCA 90 bp GCAAAAGCAGCAGACACAGAACAGAATGATTTCATTGATATAAAGTTCCAGAAGTTAACAAACATTAAGTaGGCACCAACTACATGCAGG +
Preference number: 4 (lower is better)
Translates to: AKAADTEQNDFIDIKFQKLTNIK*APTTCR
Trigger: CCTGCATGTAGTTGGTGCTCACTTAATGTTTGTTAA...CTTCTGGAACTTTATATCAATGAAATCATTCTGTTCTGTGTCTGCTGCTTTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CCA 90 bp GCAAAAGCAGCAGACACAGAACAGAATGATTTCATTGATATAAAGTTCCAGAAGGAGTCAGTACAAGTGTaGAATTACTCGAGAAACTTG +
Preference number: 4 (lower is better)
Translates to: AKAADTEQNDFIDIKFQKESVQV*NYSRNL
Trigger: CAAGTTTCTCGAGTAATTCCACACTTGTACTGACTC...CTTCTGGAACTTTATATCAATGAAATCATTCTGTTCTGTGTCTGCTGCTTTTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS GCA 90 bp CGTACATCTCGGCGGGGCGCGCGCCTCTCGAGAGGCCGGCGTCGCTaGGGCGTTCCCAGCCAGCCCTCGGCGGCGCCCGCCTTTCATTCA +
Preference number: 5 (lower is better)
Translates to: RTSRRGARLSRGRRR*GVPSQPSAAPAFHS
Trigger: TGAATGAAAGGCGGGCGCCGCCGAGGGCTGGCTGGGAACGCCGCAGCGACGCCGGCCTCTCGAGAGGCGCGCGCCCCGCCGAGATGTACG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000401432.7
ENST00000403714.8
CDS GCA 90 bp GCAGGGGAGCCTGGAGTCCAGCGTCCAATCTACAGGAGGTGGGGCTaGCCCAGGACGGTGGCACGGACACTCACCTCCTCCTTCTCCGGA +
Preference number: 5 (lower is better)
Translates to: AGEPGVQRPIYRRWG*PRTVARTLTSSFSG
Trigger: TCCGGAGAAGGAGGAGGTGAGTGTCCGTGCCACCGTCCTGGGGCAGCCCCACCTCCTGTAGATTGGACGCTGGACTCCAGGCTCCCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS CCA 90 bp ATGCAGGCAGGGGAGCCTGGAGTCCAGCGTCCAATCTACAGGAGGTaGGGCTGCCCCAGGACGGTGGCACGGACACTCACCTCCTCCTTC +
Preference number: 5 (lower is better)
Translates to: MQAGEPGVQRPIYRR*GCPRTVARTLTSSF
Trigger: GAAGGAGGAGGTGAGTGTCCGTGCCACCGTCCTGGGGCAGCCCCACCTCCTGTAGATTGGACGCTGGACTCCAGGCTCCCCTGCCTGCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CAA 90 bp GGAGAGAGCAGCCAACTCACCCCGATGCCTAACGCATTGGAGGTTCCCAGTCCTGCAGCGCTGCGGCTGTaGGCGTCCAGGTGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: GESSQLTPMPNALEVPSPAALRL*ASRWPR
Trigger: CCTGGGCCACCTGGACGCCAACAGCCGCAGCGCTGC...AGGACTGGGAACCTCCAATGCGTTAGGCATCGGGGTGAGTTGGCTGCTCTCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CAA 90 bp GAGGAGGAGGTAGGAGGGCCAAGAAGGACCAGAGAGTCTCCACCTTGGCTTAGCGCAGCGCTGCGGCTGTaGGCGTCCAGGTGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: EEEVGGPRRTRESPPWLSAALRL*ASRWPR
Trigger: CCTGGGCCACCTGGACGCCAACAGCCGCAGCGCTGC...GCTAAGCCAAGGTGGAGACTCTCTGGTCCTTCTTGGCCCTCCTACCTCCTCCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR CAA 90 bp CCATCCAGCTCCGTCCTCTGGGGAGGACATGCCCTTCACTCAAAACACCAAGTAGCAGCGCTGCGGCTGTaGGCGTCCAGGTGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: PSSSVLWGGHALHSKHQVAALRL*ASRWPR
Trigger: CCTGGGCCACCTGGACGCCAACAGCCGCAGCGCTGC...TACTTGGTGTTTTGAGTGAAGGGCATGTCCTCCCCAGAGGACGGAGCTGGATGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CAA 90 bp GAGGAGGAGGTAGGAGGGCCAAGAAGGACCAGAGAGTCTCCACCTTGGCTTAGCCCTGCTTCCTGCCCTTaGCTGTCCCCCGACCCCTCG +
Preference number: 5 (lower is better)
Translates to: EEEVGGPRRTRESPPWLSPASCP*LSPDPS
Trigger: CGAGGGGTCGGGGGACAGCAAAGGGCAGGAAGCAGG...GCTAAGCCAAGGTGGAGACTCTCTGGTCCTTCTTGGCCCTCCTACCTCCTCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS CCA 90 bp GGCAGCGTGCTGGCAAAGGAGCCCACGGTCTTGATGACGGCCTCCTaGAACATGCGCTCCTCGTGCTCCTTGATGATCTTGGTGCCGAGG +
Preference number: 5 (lower is better)
Translates to: GSVLAKEPTVLMTAS*NMRSSCSLMILVPR
Trigger: CCTCGGCACCAAGATCATCAAGGAGCACGAGGAGCGCATGTTCCAGGAGGCCGTCATCAAGACCGTGGGCTCCTTTGCCAGCACGCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264719.5
ENST00000401432.7
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR CAA 90 bp GAACCCAACTCTGAAAAACGTCCAGCAGACAGGACTGTGGGAGGCCAACACAAGGCAGCGCTGCGGCTGTaGGCGTCCAGGTGGCCCAGG +
Preference number: 5 (lower is better)
Translates to: EPNSEKRPADRTVGGQHKAALRL*ASRWPR
Trigger: CCTGGGCCACCTGGACGCCAACAGCCGCAGCGCTGC...CTTGTGTTGGCCTCCCACAGTCCTGTCTGCTGGACGTTTTTCAGAGTTGGGTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CAA 90 bp CAAGGCGCTGGGGACTCCATGGCAAGGAAAACAGAGGGAGCCTCGGGACCACACCCCAAGCCACAAGCGTaGCCAGGTGGTGCTGATGTC +
Preference number: 5 (lower is better)
Translates to: QGAGDSMARKTEGASGPHPKPQA*PGGADV
Trigger: GACATCAGCACCACCTGGCAACGCTTGTGGCTTGGG...GTGTGGTCCCGAGGCTCCCTCTGTTTTCCTTGCCATGGAGTCCCCAGCGCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR CAA 90 bp CTTGCTCTGCCTTTCCTCAACCCAGAAGCTCCAGGAACACCTTGGGACCCTCAGCGGCCCGAGGCATCTTaGTCCTCGCAGCGCAGACGC +
Preference number: 5 (lower is better)
Translates to: LALPFLNPEAPGTPWDPQRPEAS*SSQRRR
Trigger: GCGTCTGCGCTGCGAGGACAAAGATGCCTCGGGCCG...CTGAGGGTCCCAAGGTGTTCCTGGAGCTTCTGGGTTGAGGAAAGGCAGAGCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402191.5
CDS-3UTR CAA 90 bp GCACTAGCAAAGGCCTGGAGATGGCGGAGCGCAGCGTGGGAGAGATCGAGAGCAGATGGCCGCGGGACCTaGCTCATGATGAAGAGGATC +
Preference number: 5 (lower is better)
Translates to: ALAKAWRWRSAAWERSRADGRGT*LMMKRI
Trigger: GATCCTCTTCATCATGAGCAAGGTCCCGCGGCCATC...TGCTCTCGATCTCTCCCACGCTGCGCTCCGCCATCTCCAGGCCTTTGCTAGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CAA 90 bp CACAGGCGCTCAGCTGCACCAGTGTGGAGGGAAGGGTGGTTCAGATGTGGCATTTGCTCCTTGATGATCTaGGTGCCGAGGCTGACCGCC +
Preference number: 5 (lower is better)
Translates to: HRRSAAPVWREGWFRCGICSLMI*VPRLTA
Trigger: GGCGGTCAGCCTCGGCACCAAGATCATCAAGGAGCA...AATGCCACATCTGAACCACCCTTCCCTCCACACTGGTGCAGCTGAGCGCCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CAA 90 bp AGACGAGGAGGAGGTAGGAGGGCCAAGAAGGACCAGAGAGTCTCCACCTTGGCTTGCTCCTTGATGATCTaGGTGCCGAGGCTGACCGCC +
Preference number: 5 (lower is better)
Translates to: RRGGGRRAKKDQRVSTLACSLMI*VPRLTA
Trigger: GGCGGTCAGCCTCGGCACCAAGATCATCAAGGAGCA...AGCCAAGGTGGAGACTCTCTGGTCCTTCTTGGCCCTCCTACCTCCTCCTCGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR CAA 90 bp GGAGAGAGCAGCCAACTCACCCCGATGCCTAACGCATTGGAGGTTCCCAGTCCTCGCTCCTCGTGCTCCTaGATGATCTTGGTGCCGAGG +
Preference number: 5 (lower is better)
Translates to: GESSQLTPMPNALEVPSPRSSCS*MILVPR
Trigger: CCTCGGCACCAAGATCATCAAGGAGCACGAGGAGCG...AGGACTGGGAACCTCCAATGCGTTAGGCATCGGGGTGAGTTGGCTGCTCTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CAA 90 bp AGACGAGGAGGAGGTAGGAGGGCCAAGAAGGACCAGAGAGTCTCCACCTTGGCTAAGGAGCCCACGGTCTaGATGACGGCCTCCTGGAAC +
Preference number: 5 (lower is better)
Translates to: RRGGGRRAKKDQRVSTLAKEPTV*MTASWN
Trigger: GTTCCAGGAGGCCGTCATCAAGACCGTGGGCTCCTT...AGCCAAGGTGGAGACTCTCTGGTCCTTCTTGGCCCTCCTACCTCCTCCTCGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR CAA 90 bp CAAGGCGCTGGGGACTCCATGGCAAGGAAAACAGAGGGAGCCTCGGGACCACACAGCTTGGCCACCATCTaGAGGAAGCTCTCCACGAAG +
Preference number: 5 (lower is better)
Translates to: QGAGDSMARKTEGASGPHSLATI*RKLSTK
Trigger: CTTCGTGGAGAGCTTCCTCAAGATGGTGGCCAAGCT...GTGTGGTCCCGAGGCTCCCTCTGTTTTCCTTGCCATGGAGTCCCCAGCGCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR CAA 90 bp AAGGGGTCTCCATGGCTCCTCCCAAGCCACAAGCGTTGCCAGGTGGTGCTGATGCACAGAAAACTGCCTTaGGCCCCAGCAGGGCCACAA +
Preference number: 5 (lower is better)
Translates to: KGSPWLLPSHKRCQVVLMHRKLP*APAGPQ
Trigger: TTGTGGCCCTGCTGGGGCCAAAGGCAGTTTTCTGTG...CATCAGCACCACCTGGCAACGCTTGTGGCTTGGGAGGAGCCATGGAGACCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS CCA 90 bp CCTCGGGATCCTCAGGGAAGATGTTGTCAACCAGCCTTTTGTACCTaGGGCGTAGGGCACCACAGCAGCCACACACACCGTACATCTCGG +
Preference number: 5 (lower is better)
Translates to: PRDPQGRCCQPAFCT*GVGHHSSHTHRTSR
Trigger: CCGAGATGTACGGTGTGTGTGGCTGCTGTGGTGCCCTACGCCCCAGGTACAAAAGGCTGGTTGACAACATCTTCCCTGAGGATCCCGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000401432.7
ENST00000403714.8
CDS-3UTR CAA 90 bp GCACTAGCAAAGGCCTGGAGATGGCGGAGCGCAGCGTGGGAGAGATCGAGAGCAGGCTTGATGGCGTTTTaGATGTTGCCAAAGGCAGCC +
Preference number: 5 (lower is better)
Translates to: ALAKAWRWRSAAWERSRAGLMAF*MLPKAA
Trigger: GGCTGCCTTTGGCAACATCAAAAACGCCATCAAGCC...TGCTCTCGATCTCTCCCACGCTGCGCTCCGCCATCTCCAGGCCTTTGCTAGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CAA 90 bp GCTCTGCCTTTCCTCAACCCAGAAGCTCCAGGAACACCTTGGGACCCTCAGAAGCACAGCCAAAAAGCCTaGGGGGTGCAGGAGCCTCCA +
Preference number: 5 (lower is better)
Translates to: ALPFLNPEAPGTPWDPQKHSQKA*GVQEPP
Trigger: TGGAGGCTCCTGCACCCCCAAGGCTTTTTGGCTGTG...CTTCTGAGGGTCCCAAGGTGTTCCTGGAGCTTCTGGGTTGAGGAAAGGCAGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR CAA 90 bp ATTACGAGATATGGGCTACAGCATTTGTGGATTCACAACTCTGCCTCCACGCGCGGGAAGGTGACTGGCTaGGGCGGCCCCATGGTCCCC +
Preference number: 5 (lower is better)
Translates to: ITRYGLQHLWIHNSASTRGKVTG*GGPMVP
Trigger: GGGGACCATGGGGCCGCCCAAGCCAGTCACCTTCCC...GCGCGTGGAGGCAGAGTTGTGAATCCACAAATGCTGTAGCCCATATCTCGTAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS TCA 90 bp GAGGGCGGTGGAGAGAAGGCGGTCCAGGAAGTTGCTAGGCAGGGCTaGCATCATGTTGTTGCACTGGAAACCTGTGGATACCTGCAGGAG +
Preference number: 5 (lower is better)
Translates to: EGGGEKAVQEVARQG*HHVVALETCGYLQE
Trigger: CTCCTGCAGGTATCCACAGGTTTCCAGTGCAACAACATGATGTCAGCCCTGCCTAGCAACTTCCTGGACCGCCTTCTCTCCACCGCCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264719.5
ENST00000401432.7
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR CAA 90 bp CTTTCCCACAGGACCCCAACCGGCCAGCTGCCATTTTCTGGTCATGAAGAGGAATGCTCCTTGATGATCTaGGTGCCGAGGCTGACCGCC +
Preference number: 5 (lower is better)
Translates to: LSHRTPTGQLPFSGHEEECSLMI*VPRLTA
Trigger: GGCGGTCAGCCTCGGCACCAAGATCATCAAGGAGCA...TTCCTCTTCATGACCAGAAAATGGCAGCTGGCCGGTTGGGGTCCTGTGGGAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR CAA 90 bp ACAGGTGAGATGCTGATTGGTGAGACCTCCCTCAGGGAAGACGAGGAGGAGGTACGCTCCTCGTGCTCCTaGATGATCTTGGTGCCGAGG +
Preference number: 5 (lower is better)
Translates to: TGEMLIGETSLREDEEEVRSSCS*MILVPR
Trigger: CCTCGGCACCAAGATCATCAAGGAGCACGAGGAGCG...TACCTCCTCCTCGTCTTCCCTGAGGGAGGTCTCACCAATCAGCATCTCACCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR CAA 90 bp ACAGGTGAGATGCTGATTGGTGAGACCTCCCTCAGGGAAGACGAGGAGGAGGTAAGGCGGTCCAGGAAGTaGCTAGGCAGGGCTGACATC +
Preference number: 5 (lower is better)
Translates to: TGEMLIGETSLREDEEEVRRSRK*LGRADI
Trigger: GATGTCAGCCCTGCCTAGCAACTTCCTGGACCGCCT...TACCTCCTCCTCGTCTTCCCTGAGGGAGGTCTCACCAATCAGCATCTCACCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR CAA 90 bp GGCCGGGCGCTGGAGAACAGACAGTTCACAGGCGCTCAGCTGCACCAGTGTGGAAGTGTTTCTGCACGTTaGTTTCCTCCTTGCAGCTCA +
Preference number: 5 (lower is better)
Translates to: GRALENRQFTGAQLHQCGSVSAR*FPPCSS
Trigger: TGAGCTGCAAGGAGGAAACAAACGTGCAGAAACACT...TCCACACTGGTGCAGCTGAGCGCCTGTGAACTGTCTGTTCTCCAGCGCCCGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CAA 90 bp GAGGAGGAGGTAGGAGGGCCAAGAAGGACCAGAGAGTCTCCACCTTGGCTTAGCAGGACTTCACTGATCTaGCTCTGGCGGAAGAGGAGC +
Preference number: 5 (lower is better)
Translates to: EEEVGGPRRTRESPPWLSRTSLI*LWRKRS
Trigger: GCTCCTCTTCCGCCAGAGCAAGATCAGTGAAGTCCT...GCTAAGCCAAGGTGGAGACTCTCTGGTCCTTCTTGGCCCTCCTACCTCCTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR CAA 90 bp CACAGGCGCTCAGCTGCACCAGTGTGGAGGGAAGGGTGGTTCAGATGTGGCATTTTGTCAACCAGCCTTTaGTACCTGGGGCGTAGGGCA +
Preference number: 5 (lower is better)
Translates to: HRRSAAPVWREGWFRCGILSTSL*YLGRRA
Trigger: TGCCCTACGCCCCAGGTACAAAAGGCTGGTTGACAA...AATGCCACATCTGAACCACCCTTCCCTCCACACTGGTGCAGCTGAGCGCCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS GCA 90 bp GAAGGCAGGCACTGTTGTGAGCTGACTGATGAGGTTCAGGTAGGCTaGGCCCAGAGCATAGAGGGCACAGCGGTTGTAGACAGGCAAGTT +
Preference number: 5 (lower is better)
Translates to: EGRHCCELTDEVQVG*AQSIEGTAVVDRQV
Trigger: AACTTGCCTGTCTACAACCGCTGTGCCCTCTATGCTCTGGGCGCAGCCTACCTGAACCTCATCAGTCAGCTCACAACAGTGCCTGCCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401432.7
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR CAA 90 bp CCATCCAGCTCCGTCCTCTGGGGAGGACATGCCCTTCACTCAAAACACCAAGTAATGGCGTTTTTGATGTaGCCAAAGGCAGCCCGGCCC +
Preference number: 5 (lower is better)
Translates to: PSSSVLWGGHALHSKHQVMAFLM*PKAARP
Trigger: GGGCCGGGCTGCCTTTGGCAACATCAAAAACGCCAT...TACTTGGTGTTTTGAGTGAAGGGCATGTCCTCCCCAGAGGACGGAGCTGGATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CAA 90 bp ACAGGTGAGATGCTGATTGGTGAGACCTCCCTCAGGGAAGACGAGGAGGAGGTAATGGCGTTTTTGATGTaGCCAAAGGCAGCCCGGCCC +
Preference number: 5 (lower is better)
Translates to: TGEMLIGETSLREDEEEVMAFLM*PKAARP
Trigger: GGGCCGGGCTGCCTTTGGCAACATCAAAAACGCCAT...TACCTCCTCCTCGTCTTCCCTGAGGGAGGTCTCACCAATCAGCATCTCACCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR CAA 90 bp CACAGGCGCTCAGCTGCACCAGTGTGGAGGGAAGGGTGGTTCAGATGTGGCATTCGGATGGCAAACACCTaGGGTTCCCAAAGAGAATGG +
Preference number: 5 (lower is better)
Translates to: HRRSAAPVWREGWFRCGIRMANT*GSQREW
Trigger: CCATTCTCTTTGGGAACCCAAGGTGTTTGCCATCCG...AATGCCACATCTGAACCACCCTTCCCTCCACACTGGTGCAGCTGAGCGCCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CAA 90 bp GAGAGAGAACCCAACTCTGAAAAACGTCCAGCAGACAGGACTGTGGGAGGCCAATGCTCCTTGATGATCTaGGTGCCGAGGCTGACCGCC +
Preference number: 5 (lower is better)
Translates to: EREPNSEKRPADRTVGGQCSLMI*VPRLTA
Trigger: GGCGGTCAGCCTCGGCACCAAGATCATCAAGGAGCA...TTGGCCTCCCACAGTCCTGTCTGCTGGACGTTTTTCAGAGTTGGGTTCTCTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CAA 90 bp CCTGAGAGACACCCCATGATTCTCTGCCCCTGGCTGACACAAGAGAAGACAAAGAAGGAGCCCACGGTCTaGATGACGGCCTCCTGGAAC +
Preference number: 5 (lower is better)
Translates to: PERHPMILCPWLTQEKTKKEPTV*MTASWN
Trigger: GTTCCAGGAGGCCGTCATCAAGACCGTGGGCTCCTT...CTTTGTCTTCTCTTGTGTCAGCCAGGGGCAGAGAATCATGGGGTGTCTCTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CAA 90 bp CATGATTCTCTGCCCCTGGCTGACACAAGAGAAGACAAAGAGGGCACAGGTGAGAGGCGGTCCAGGAAGTaGCTAGGCAGGGCTGACATC +
Preference number: 5 (lower is better)
Translates to: HDSLPLADTREDKEGTGERRSRK*LGRADI
Trigger: GATGTCAGCCCTGCCTAGCAACTTCCTGGACCGCCT...CTCACCTGTGCCCTCTTTGTCTTCTCTTGTGTCAGCCAGGGGCAGAGAATCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CAA 90 bp AGACGAGGAGGAGGTAGGAGGGCCAAGAAGGACCAGAGAGTCTCCACCTTGGCTTCCTGTCGAGAGCACTaGTCCACTTTCAGCTTCAGG +
Preference number: 5 (lower is better)
Translates to: RRGGGRRAKKDQRVSTLASCREH*STFSFR
Trigger: CCTGAAGCTGAAAGTGGACAAGTGCTCTCGACAGGA...AGCCAAGGTGGAGACTCTCTGGTCCTTCTTGGCCCTCCTACCTCCTCCTCGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR CAA 90 bp CACAGGACCCCAACCGGCCAGCTGCCATTTTCTGGTCATGAAGAGGAATTGGGACTCTCCACGAAGAGGTaGATGCTCTGGCAGTGGCAG +
Preference number: 5 (lower is better)
Translates to: HRTPTGQLPFSGHEEELGLSTKR*MLWQWQ
Trigger: CTGCCACTGCCAGAGCATCAACCTCTTCGTGGAGAG...TCCCAATTCCTCTTCATGACCAGAAAATGGCAGCTGGCCGGTTGGGGTCCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR CAA 90 bp GTCAGGCTGGGAGCCTTTTCCATAGGAGGTGATGTGGGCAAATCTTGGGGACCCTCTGACTCCAGCAGCTaGGCCACCATCTTGAGGAAG +
Preference number: 5 (lower is better)
Translates to: VRLGAFSIGGDVGKSWGPSDSSS*ATILRK
Trigger: CTTCCTCAAGATGGTGGCCAAGCTGCTGGAGTCAGA...GGGTCCCCAAGATTTGCCCACATCACCTCCTATGGAAAAGGCTCCCAGCCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CAA 90 bp CTTTCCCACAGGACCCCAACCGGCCAGCTGCCATTTTCTGGTCATGAAGAGGAATCAGACCCCATCTCCTaGAGGAGCTCAGGCTCTTGG +
Preference number: 5 (lower is better)
Translates to: LSHRTPTGQLPFSGHEEESDPIS*RSSGSW
Trigger: CCAAGAGCCTGAGCTCCTCAAGGAGATGGGGTCTGA...TTCCTCTTCATGACCAGAAAATGGCAGCTGGCCGGTTGGGGTCCTGTGGGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR CAA 90 bp TCCAAGATTATCTTGCTCTGCCTTTCCTCAACCCAGAAGCTCCAGGAACACCTTCCTGCTTCCTGCCCTTaGCTGTCCCCCGACCCCTCG +
Preference number: 5 (lower is better)
Translates to: SKIILLCLSSTQKLQEHLPASCP*LSPDPS
Trigger: CGAGGGGTCGGGGGACAGCAAAGGGCAGGAAGCAGG...AAGGTGTTCCTGGAGCTTCTGGGTTGAGGAAAGGCAGAGCAAGATAATCTTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CAA 90 bp TGGCTCTGTAGCTGTGTAAGCATTTCGCCTTGCGCTTCTGAGTCACTTCACTCCGGAGGTTCCCAGTCCTaGGAGCTGGAAGGGCCATGG +
Preference number: 5 (lower is better)
Translates to: WLCSCVSISPCASESLHSGGSQS*ELEGPW
Trigger: CCATGGCCCTTCCAGCTCCAAGGACTGGGAACCTCC...GGAGTGAAGTGACTCAGAAGCGCAAGGCGAAATGCTTACACAGCTACAGAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CAA 90 bp CATGATTCTCTGCCCCTGGCTGACACAAGAGAAGACAAAGAGGGCACAGGTGAGATGGCGTTTTTGATGTaGCCAAAGGCAGCCCGGCCC +
Preference number: 5 (lower is better)
Translates to: HDSLPLADTREDKEGTGEMAFLM*PKAARP
Trigger: GGGCCGGGCTGCCTTTGGCAACATCAAAAACGCCAT...CTCACCTGTGCCCTCTTTGTCTTCTCTTGTGTCAGCCAGGGGCAGAGAATCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CAA 90 bp CTTGCTCTGCCTTTCCTCAACCCAGAAGCTCCAGGAACACCTTGGGACCCTCAGCGGATGGCAAACACCTaGGGTTCCCAAAGAGAATGG +
Preference number: 5 (lower is better)
Translates to: LALPFLNPEAPGTPWDPQRMANT*GSQREW
Trigger: CCATTCTCTTTGGGAACCCAAGGTGTTTGCCATCCG...CTGAGGGTCCCAAGGTGTTCCTGGAGCTTCTGGGTTGAGGAAAGGCAGAGCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CAA 90 bp GCAGCCGGTCTCAATGGGCTTACTGACTCCTCTTCGCTCAAAATCACATCAGAGAAGGAGCCCACGGTCTaGATGACGGCCTCCTGGAAC +
Preference number: 5 (lower is better)
Translates to: AAGLNGLTDSSSLKITSEKEPTV*MTASWN
Trigger: GTTCCAGGAGGCCGTCATCAAGACCGTGGGCTCCTT...CTCTGATGTGATTTTGAGCGAAGAGGAGTCAGTAAGCCCATTGAGACCGGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR CAA 90 bp CACCTTGGCTTAGCCTGGGAGGCGCTGCCATCTAAGGTGATGTTTTCTCAGAGAGATGGCCGCGGGACCTaGCTCATGATGAAGAGGATC +
Preference number: 5 (lower is better)
Translates to: HLGLAWEALPSKVMFSQRDGRGT*LMMKRI
Trigger: GATCCTCTTCATCATGAGCAAGGTCCCGCGGCCATC...TCTCTGAGAAAACATCACCTTAGATGGCAGCGCCTCCCAGGCTAAGCCAAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR CAA 90 bp TCACCAACCAAGTCTCCATCCAGCTCCGTCCTCTGGGGAGGACATGCCCTTCACAGGGCTGACATCATGTaGTTGCACTGGAAACCTGTG +
Preference number: 5 (lower is better)
Translates to: SPTKSPSSSVLWGGHALHRADIM*LHWKPV
Trigger: CACAGGTTTCCAGTGCAACAACATGATGTCAGCCCT...GTGAAGGGCATGTCCTCCCCAGAGGACGGAGCTGGATGGAGACTTGGTTGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CAA 90 bp TGGCTCTGTAGCTGTGTAAGCATTTCGCCTTGCGCTTCTGAGTCACTTCACTCCAGGCGGTCCAGGAAGTaGCTAGGCAGGGCTGACATC +
Preference number: 5 (lower is better)
Translates to: WLCSCVSISPCASESLHSRRSRK*LGRADI
Trigger: GATGTCAGCCCTGCCTAGCAACTTCCTGGACCGCCT...GGAGTGAAGTGACTCAGAAGCGCAAGGCGAAATGCTTACACAGCTACAGAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CAA 90 bp GTCAGGCTGGGAGCCTTTTCCATAGGAGGTGATGTGGGCAAATCTTGGGGACCCTCCTGTCGAGAGCACTaGTCCACTTTCAGCTTCAGG +
Preference number: 5 (lower is better)
Translates to: VRLGAFSIGGDVGKSWGPSCREH*STFSFR
Trigger: CCTGAAGCTGAAAGTGGACAAGTGCTCTCGACAGGA...GGGTCCCCAAGATTTGCCCACATCACCTCCTATGGAAAAGGCTCCCAGCCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CAA 90 bp CCATCCAGCTCCGTCCTCTGGGGAGGACATGCCCTTCACTCAAAACACCAAGTAAGGACTTCACTGATCTaGCTCTGGCGGAAGAGGAGC +
Preference number: 5 (lower is better)
Translates to: PSSSVLWGGHALHSKHQVRTSLI*LWRKRS
Trigger: GCTCCTCTTCCGCCAGAGCAAGATCAGTGAAGTCCT...TACTTGGTGTTTTGAGTGAAGGGCATGTCCTCCCCAGAGGACGGAGCTGGATGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CAA 90 bp ACAGGTGAGATGCTGATTGGTGAGACCTCCCTCAGGGAAGACGAGGAGGAGGTAAGGACTTCACTGATCTaGCTCTGGCGGAAGAGGAGC +
Preference number: 5 (lower is better)
Translates to: TGEMLIGETSLREDEEEVRTSLI*LWRKRS
Trigger: GCTCCTCTTCCGCCAGAGCAAGATCAGTGAAGTCCT...TACCTCCTCCTCGTCTTCCCTGAGGGAGGTCTCACCAATCAGCATCTCACCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR CAA 90 bp GTGGGGAAAAATGAAATGGCAGAGCCCAGACTATGCATGGCTGGGAATGCCAGGCTCTCCACGAAGAGGTaGATGCTCTGGCAGTGGCAG +
Preference number: 5 (lower is better)
Translates to: VGKNEMAEPRLCMAGNARLSTKR*MLWQWQ
Trigger: CTGCCACTGCCAGAGCATCAACCTCTTCGTGGAGAG...CCTGGCATTCCCAGCCATGCATAGTCTGGGCTCTGCCATTTCATTTTTCCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CAA 90 bp GAACCCAACTCTGAAAAACGTCCAGCAGACAGGACTGTGGGAGGCCAACACAAGCTCTCCACGAAGAGGTaGATGCTCTGGCAGTGGCAG +
Preference number: 5 (lower is better)
Translates to: EPNSEKRPADRTVGGQHKLSTKR*MLWQWQ
Trigger: CTGCCACTGCCAGAGCATCAACCTCTTCGTGGAGAG...CTTGTGTTGGCCTCCCACAGTCCTGTCTGCTGGACGTTTTTCAGAGTTGGGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CAA 90 bp CTGGATGATGACAGTGTTCCACTCTCTCATCCAGGCGTGGTTGCGTGGGCATACTCTGACTCCAGCAGCTaGGCCACCATCTTGAGGAAG +
Preference number: 5 (lower is better)
Translates to: LDDDSVPLSHPGVVAWAYSDSSS*ATILRK
Trigger: CTTCCTCAAGATGGTGGCCAAGCTGCTGGAGTCAGA...GTATGCCCACGCAACCACGCCTGGATGAGAGAGTGGAACACTGTCATCATCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CAA 90 bp CACCTTGGCTTAGCCTGGGAGGCGCTGCCATCTAAGGTGATGTTTTCTCAGAGATCAGACCCCATCTCCTaGAGGAGCTCAGGCTCTTGG +
Preference number: 5 (lower is better)
Translates to: HLGLAWEALPSKVMFSQRSDPIS*RSSGSW
Trigger: CCAAGAGCCTGAGCTCCTCAAGGAGATGGGGTCTGA...TCTCTGAGAAAACATCACCTTAGATGGCAGCGCCTCCCAGGCTAAGCCAAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR CAA 90 bp GAGGAGGAGGTAGGAGGGCCAAGAAGGACCAGAGAGTCTCCACCTTGGCTTAGCCCCTCCAAGATTATCTaGCTCTGCCTTTCCTCAACC +
Preference number: 5 (lower is better)
Translates to: EEEVGGPRRTRESPPWLSPSKII*LCLSST
Trigger: GGTTGAGGAAAGGCAGAGCAAGATAATCTTGGAGGG...GCTAAGCCAAGGTGGAGACTCTCTGGTCCTTCTTGGCCCTCCTACCTCCTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CAA 90 bp GAGGAGGAGGTAGGAGGGCCAAGAAGGACCAGAGAGTCTCCACCTTGGCTTAGCTGGCTTCTGATATCCTaGAGCCCCAAAACACCACTC +
Preference number: 5 (lower is better)
Translates to: EEEVGGPRRTRESPPWLSWLLIS*SPKTPL
Trigger: GAGTGGTGTTTTGGGGCTCAAGGATATCAGAAGCCA...GCTAAGCCAAGGTGGAGACTCTCTGGTCCTTCTTGGCCCTCCTACCTCCTCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CAA 90 bp GGGCTTGGAAGGGCAGGACTCACTGATGCTAGACCAAGGGCCAGGGTACCTCCCCCACACTGCCTGAAATaGTACCCTAAAAAGGGATTC +
Preference number: 5 (lower is better)
Translates to: GLGRAGLTDARPRARVPPPHCLK*YPKKGF
Trigger: GAATCCCTTTTTAGGGTACAATTTCAGGCAGTGTGG...GGGAGGTACCCTGGCCCTTGGTCTAGCATCAGTGAGTCCTGCCCTTCCAAGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR CAA 90 bp CTTTCCCACAGGACCCCAACCGGCCAGCTGCCATTTTCTGGTCATGAAGAGGAAGTTGAGGTCACACCATaGTACTCCAGCCTGGGTGAC +
Preference number: 5 (lower is better)
Translates to: LSHRTPTGQLPFSGHEEEVEVTP*YSSLGD
Trigger: GTCACCCAGGCTGGAGTACAATGGTGTGACCTCAAC...TTCCTCTTCATGACCAGAAAATGGCAGCTGGCCGGTTGGGGTCCTGTGGGAAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR CAA 90 bp CAAGGCGCTGGGGACTCCATGGCAAGGAAAACAGAGGGAGCCTCGGGACCACACGCTTGTAAAATTGGGTaGAGTATAAGCCAGAGGCCA +
Preference number: 5 (lower is better)
Translates to: QGAGDSMARKTEGASGPHACKIG*SISQRP
Trigger: TGGCCTCTGGCTTATACTCAACCCAATTTTACAAGC...GTGTGGTCCCGAGGCTCCCTCTGTTTTCCTTGCCATGGAGTCCCCAGCGCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS GCA 90 bp ACTCGCTCCTCCTTCTCCGGACTGTTCCTCGATTCTACCTCCACCTaGAGGGAGATGGTCTCTCCAATGCTCCTCCTCTTGGATAAACGA +
Preference number: 5 (lower is better)
Translates to: TRSSFSGLFLDSTST*REMVSPMLLLLDKR
Trigger: TCGTTTATCCAAGAGGAGGAGCATTGGAGAGACCATCTCCCTGCAGGTGGAGGTAGAATCGAGGAACAGTCCGGAGAAGGAGGAGCGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264719.5
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS GCA 90 bp CTCACCTCCTCCTTCTCCGGACTGTTCCTCGATTCTACCTCCACCTaGAGGGAGATGGTCTCTCCAATGCTCCTCCTCTTGGATAAACGA +
Preference number: 5 (lower is better)
Translates to: LTSSFSGLFLDSTST*REMVSPMLLLLDKR
Trigger: TCGTTTATCCAAGAGGAGGAGCATTGGAGAGACCATCTCCCTGCAGGTGGAGGTAGAATCGAGGAACAGTCCGGAGAAGGAGGAGGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CAA 90 bp GTCAGGCTGGGAGCCTTTTCCATAGGAGGTGATGTGGGCAAATCTTGGGGACCCTGTGGGTCCCAGATATaGGCCTGCAGTTCATCATTC +
Preference number: 5 (lower is better)
Translates to: VRLGAFSIGGDVGKSWGPCGSQI*ACSSSF
Trigger: GAATGATGAACTGCAGGCCAATATCTGGGACCCACA...GGGTCCCCAAGATTTGCCCACATCACCTCCTATGGAAAAGGCTCCCAGCCTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CAA 90 bp CACAGGACCCCAACCGGCCAGCTGCCATTTTCTGGTCATGAAGAGGAATTGGGACGGATGGCAAACACCTaGGGTTCCCAAAGAGAATGG +
Preference number: 5 (lower is better)
Translates to: HRTPTGQLPFSGHEEELGRMANT*GSQREW
Trigger: CCATTCTCTTTGGGAACCCAAGGTGTTTGCCATCCG...TCCCAATTCCTCTTCATGACCAGAAAATGGCAGCTGGCCGGTTGGGGTCCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR CAA 90 bp ACAGGTGAGATGCTGATTGGTGAGACCTCCCTCAGGGAAGACGAGGAGGAGGTACGGATGGCAAACACCTaGGGTTCCCAAAGAGAATGG +
Preference number: 5 (lower is better)
Translates to: TGEMLIGETSLREDEEEVRMANT*GSQREW
Trigger: CCATTCTCTTTGGGAACCCAAGGTGTTTGCCATCCG...TACCTCCTCCTCGTCTTCCCTGAGGGAGGTCTCACCAATCAGCATCTCACCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR CAA 90 bp CCAAGATTATCTTGCTCTGCCTTTCCTCAACCCAGAAGCTCCAGGAACACCTTGCGCTCCTCGTGCTCCTaGATGATCTTGGTGCCGAGG +
Preference number: 5 (lower is better)
Translates to: PRLSCSAFPQPRSSRNTLRSSCS*MILVPR
Trigger: CCTCGGCACCAAGATCATCAAGGAGCACGAGGAGCG...CAAGGTGTTCCTGGAGCTTCTGGGTTGAGGAAAGGCAGAGCAAGATAATCTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CAA 90 bp GAGGAGGAGGTAGGAGGGCCAAGAAGGACCAGAGAGTCTCCACCTTGGCTTAGCGCTGACATCATGTTGTaGCACTGGAAACCTGTGGAT +
Preference number: 5 (lower is better)
Translates to: EEEVGGPRRTRESPPWLSADIML*HWKPVD
Trigger: ATCCACAGGTTTCCAGTGCAACAACATGATGTCAGC...GCTAAGCCAAGGTGGAGACTCTCTGGTCCTTCTTGGCCCTCCTACCTCCTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR CAA 90 bp GTGGGGAAAAATGAAATGGCAGAGCCCAGACTATGCATGGCTGGGAATGCCAGGAGGACTTCACTGATCTaGCTCTGGCGGAAGAGGAGC +
Preference number: 5 (lower is better)
Translates to: VGKNEMAEPRLCMAGNARRTSLI*LWRKRS
Trigger: GCTCCTCTTCCGCCAGAGCAAGATCAGTGAAGTCCT...CCTGGCATTCCCAGCCATGCATAGTCTGGGCTCTGCCATTTCATTTTTCCCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CAA 90 bp CACCTTGGCTTAGCCTGGGAGGCGCTGCCATCTAAGGTGATGTTTTCTCAGAGATTGTCAACCAGCCTTTaGTACCTGGGGCGTAGGGCA +
Preference number: 5 (lower is better)
Translates to: HLGLAWEALPSKVMFSQRLSTSL*YLGRRA
Trigger: TGCCCTACGCCCCAGGTACAAAAGGCTGGTTGACAA...TCTCTGAGAAAACATCACCTTAGATGGCAGCGCCTCCCAGGCTAAGCCAAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CAA 90 bp ACAGGTGAGATGCTGATTGGTGAGACCTCCCTCAGGGAAGACGAGGAGGAGGTAGTCAGCTTCTCCATGTaGGTCTTCACCAGACCATCC +
Preference number: 5 (lower is better)
Translates to: TGEMLIGETSLREDEEEVVSFSM*VFTRPS
Trigger: GGATGGTCTGGTGAAGACCAACATGGAGAAGCTGAC...TACCTCCTCCTCGTCTTCCCTGAGGGAGGTCTCACCAATCAGCATCTCACCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CAA 90 bp GAGAGAGAACCCAACTCTGAAAAACGTCCAGCAGACAGGACTGTGGGAGGCCAAGTTCTCCTCATTGACTaGGGCCACGTCCTGAACAGC +
Preference number: 5 (lower is better)
Translates to: EREPNSEKRPADRTVGGQVLLID*GHVLNS
Trigger: GCTGTTCAGGACGTGGCCCAAGTCAATGAGGAGAAC...TTGGCCTCCCACAGTCCTGTCTGCTGGACGTTTTTCAGAGTTGGGTTCTCTCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CAA 90 bp CACCTTGGCTTAGCCTGGGAGGCGCTGCCATCTAAGGTGATGTTTTCTCAGAGAGTTCTCCTCATTGACTaGGGCCACGTCCTGAACAGC +
Preference number: 5 (lower is better)
Translates to: HLGLAWEALPSKVMFSQRVLLID*GHVLNS
Trigger: GCTGTTCAGGACGTGGCCCAAGTCAATGAGGAGAAC...TCTCTGAGAAAACATCACCTTAGATGGCAGCGCCTCCCAGGCTAAGCCAAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR CAA 90 bp AGACGAGGAGGAGGTAGGAGGGCCAAGAAGGACCAGAGAGTCTCCACCTTGGCTGAGGAGCTCAGGCTCTaGGAATTCAGTATACACACA +
Preference number: 5 (lower is better)
Translates to: RRGGGRRAKKDQRVSTLAEELRL*EFSIHT
Trigger: TGTGTGTATACTGAATTCCAAGAGCCTGAGCTCCTC...AGCCAAGGTGGAGACTCTCTGGTCCTTCTTGGCCCTCCTACCTCCTCCTCGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR CAA 90 bp ACAGGTGAGATGCTGATTGGTGAGACCTCCCTCAGGGAAGACGAGGAGGAGGTAAGCTCCAGGAACACCTaGGGACCCTCAGAAGAAAGA +
Preference number: 5 (lower is better)
Translates to: TGEMLIGETSLREDEEEVSSRNT*GPSEER
Trigger: TCTTTCTTCTGAGGGTCCCAAGGTGTTCCTGGAGCT...TACCTCCTCCTCGTCTTCCCTGAGGGAGGTCTCACCAATCAGCATCTCACCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CAA 90 bp GTCAGGCTGGGAGCCTTTTCCATAGGAGGTGATGTGGGCAAATCTTGGGGACCCCCCTCCAAGATTATCTaGCTCTGCCTTTCCTCAACC +
Preference number: 5 (lower is better)
Translates to: VRLGAFSIGGDVGKSWGPPSKII*LCLSST
Trigger: GGTTGAGGAAAGGCAGAGCAAGATAATCTTGGAGGG...GGGTCCCCAAGATTTGCCCACATCACCTCCTATGGAAAAGGCTCCCAGCCTGAC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CAA 90 bp GCTCTGCCTTTCCTCAACCCAGAAGCTCCAGGAACACCTTGGGACCCTCAGAAGCCGATTCTGGCCTATTaGGCCAGAATCCAGGTTCTA +
Preference number: 5 (lower is better)
Translates to: ALPFLNPEAPGTPWDPQKPILAY*ARIQVL
Trigger: TAGAACCTGGATTCTGGCCAAATAGGCCAGAATCGG...CTTCTGAGGGTCCCAAGGTGTTCCTGGAGCTTCTGGGTTGAGGAAAGGCAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR CAA 90 bp GCACTAGCAAAGGCCTGGAGATGGCGGAGCGCAGCGTGGGAGAGATCGAGAGCAGTTTGGCATTTTTGTTaGAGTAGGAGAGGACAGAAG +
Preference number: 5 (lower is better)
Translates to: ALAKAWRWRSAAWERSRAVWHFC*SRRGQK
Trigger: CTTCTGTCCTCTCCTACTCAAACAAAAATGCCAAAC...TGCTCTCGATCTCTCCCACGCTGCGCTCCGCCATCTCCAGGCCTTTGCTAGTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CAA 90 bp AGACGAGGAGGAGGTAGGAGGGCCAAGAAGGACCAGAGAGTCTCCACCTTGGCTGTGTCCTCCTCGATGTaGGCAAACTTCACAAACACT +
Preference number: 5 (lower is better)
Translates to: RRGGGRRAKKDQRVSTLAVSSSM*ANFTNT
Trigger: AGTGTTTGTGAAGTTTGCCAACATCGAGGAGGACAC...AGCCAAGGTGGAGACTCTCTGGTCCTTCTTGGCCCTCCTACCTCCTCCTCGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000405108.5
CDS GCA 90 bp GAATTACTCGAGAAACTTGCTTTCCATGCAGCCTTAAGCCCACTATaGAGGCAGGGGAGCCTGGAGTCCAGCGTCCAATCTACAGGAGGT +
Preference number: 5 (lower is better)
Translates to: ELLEKLAFHAALSPL*RQGSLESSVQSTGG
Trigger: ACCTCCTGTAGATTGGACGCTGGACTCCAGGCTCCCCTGCCTGCATAGTGGGCTTAAGGCTGCATGGAAAGCAAGTTTCTCGAGTAATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS CCA 90 bp CCTTCTCCGGACTGTTCCTCGATTCTACCTCCACCTGCAGGGAGATaGTCTCTCCAATGCTCCTCCTCTTGGATAAACGATCCTCATCTG +
Preference number: 5 (lower is better)
Translates to: PSPDCSSILPPPAGR*SLQCSSSWINDPHL
Trigger: CAGATGAGGATCGTTTATCCAAGAGGAGGAGCATTGGAGAGACCATCTCCCTGCAGGTGGAGGTAGAATCGAGGAACAGTCCGGAGAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264719.5
ENST00000401432.7
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR CAA 90 bp GGCCGGGCGCTGGAGAACAGACAGTTCACAGGCGCTCAGCTGCACCAGTGTGGACCTGACATTCGAATTTaGGTCTTGATTTCTAAGTCA +
Preference number: 5 (lower is better)
Translates to: GRALENRQFTGAQLHQCGPDIRI*VLISKS
Trigger: TGACTTAGAAATCAAGACCAAAATTCGAATGTCAGG...TCCACACTGGTGCAGCTGAGCGCCTGTGAACTGTCTGTTCTCCAGCGCCCGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CAA 90 bp CTGTATGGTACTCTGGTGGGGGATGCATGTCATTACGCATTTGTCCAAACCCACATGGCGTTTTTGATGTaGCCAAAGGCAGCCCGGCCC +
Preference number: 5 (lower is better)
Translates to: LYGTLVGDACHYAFVQTHMAFLM*PKAARP
Trigger: GGGCCGGGCTGCCTTTGGCAACATCAAAAACGCCAT...GTGGGTTTGGACAAATGCGTAATGACATGCATCCCCCACCAGAGTACCATACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CAA 90 bp GAGAGAGAACCCAACTCTGAAAAACGTCCAGCAGACAGGACTGTGGGAGGCCAAGGCTTGATGGCGTTTTaGATGTTGCCAAAGGCAGCC +
Preference number: 5 (lower is better)
Translates to: EREPNSEKRPADRTVGGQGLMAF*MLPKAA
Trigger: GGCTGCCTTTGGCAACATCAAAAACGCCATCAAGCC...TTGGCCTCCCACAGTCCTGTCTGCTGGACGTTTTTCAGAGTTGGGTTCTCTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CAA 90 bp CACCTTGGCTTAGCCTGGGAGGCGCTGCCATCTAAGGTGATGTTTTCTCAGAGAGGCTTGATGGCGTTTTaGATGTTGCCAAAGGCAGCC +
Preference number: 5 (lower is better)
Translates to: HLGLAWEALPSKVMFSQRGLMAF*MLPKAA
Trigger: GGCTGCCTTTGGCAACATCAAAAACGCCATCAAGCC...TCTCTGAGAAAACATCACCTTAGATGGCAGCGCCTCCCAGGCTAAGCCAAGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR CAA 90 bp CACAGGCGCTCAGCTGCACCAGTGTGGAGGGAAGGGTGGTTCAGATGTGGCATTTGGATGAGAACAGGCTaGATGGCGTTTTTGATGTTG +
Preference number: 5 (lower is better)
Translates to: HRRSAAPVWREGWFRCGIWMRTG*MAFLML
Trigger: CAACATCAAAAACGCCATCAAGCCTGTTCTCATCCA...AATGCCACATCTGAACCACCCTTCCCTCCACACTGGTGCAGCTGAGCGCCTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CAA 90 bp AGACGAGGAGGAGGTAGGAGGGCCAAGAAGGACCAGAGAGTCTCCACCTTGGCTTGGATGAGAACAGGCTaGATGGCGTTTTTGATGTTG +
Preference number: 5 (lower is better)
Translates to: RRGGGRRAKKDQRVSTLAWMRTG*MAFLML
Trigger: CAACATCAAAAACGCCATCAAGCCTGTTCTCATCCA...AGCCAAGGTGGAGACTCTCTGGTCCTTCTTGGCCCTCCTACCTCCTCCTCGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR CAA 90 bp AAATCTTGGGGACCCTGTAGTTCCCCTCCAAGATTATCTTGCTCTGCCTTTCCTCGCTCCTCGTGCTCCTaGATGATCTTGGTGCCGAGG +
Preference number: 5 (lower is better)
Translates to: KSWGPCSSPPRLSCSAFPRSSCS*MILVPR
Trigger: CCTCGGCACCAAGATCATCAAGGAGCACGAGGAGCG...AGGAAAGGCAGAGCAAGATAATCTTGGAGGGGAACTACAGGGTCCCCAAGATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CAA 90 bp ACTTATCCTCTGTACGTCCATCCATTCATCCACTGTCAGCACCGAGCAACATTGAAGGAGCCCACGGTCTaGATGACGGCCTCCTGGAAC +
Preference number: 5 (lower is better)
Translates to: TYPLYVHPFIHCQHRATLKEPTV*MTASWN
Trigger: GTTCCAGGAGGCCGTCATCAAGACCGTGGGCTCCTT...CAATGTTGCTCGGTGCTGACAGTGGATGAATGGATGGACGTACAGAGGATAAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CAA 90 bp CTCAACCCAGAAGCTCCAGGAACACCTTGGGACCCTCAGAAGAAAGACATCAAAGATGGCCGCGGGACCTaGCTCATGATGAAGAGGATC +
Preference number: 5 (lower is better)
Translates to: LNPEAPGTPWDPQKKDIKDGRGT*LMMKRI
Trigger: GATCCTCTTCATCATGAGCAAGGTCCCGCGGCCATC...TTTGATGTCTTTCTTCTGAGGGTCCCAAGGTGTTCCTGGAGCTTCTGGGTTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CAA 90 bp ATTACGAGATATGGGCTACAGCATTTGTGGATTCACAACTCTGCCTCCACGCGCGATGGCCGCGGGACCTaGCTCATGATGAAGAGGATC +
Preference number: 5 (lower is better)
Translates to: ITRYGLQHLWIHNSASTRDGRGT*LMMKRI
Trigger: GATCCTCTTCATCATGAGCAAGGTCCCGCGGCCATC...GCGCGTGGAGGCAGAGTTGTGAATCCACAAATGCTGTAGCCCATATCTCGTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR CAA 90 bp CTTGCTCTGCCTTTCCTCAACCCAGAAGCTCCAGGAACACCTTGGGACCCTCAGGCTGACATCATGTTGTaGCACTGGAAACCTGTGGAT +
Preference number: 5 (lower is better)
Translates to: LALPFLNPEAPGTPWDPQADIML*HWKPVD
Trigger: ATCCACAGGTTTCCAGTGCAACAACATGATGTCAGC...CTGAGGGTCCCAAGGTGTTCCTGGAGCTTCTGGGTTGAGGAAAGGCAGAGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CAA 90 bp ACAGGTGAGATGCTGATTGGTGAGACCTCCCTCAGGGAAGACGAGGAGGAGGTAAGGGCTGACATCATGTaGTTGCACTGGAAACCTGTG +
Preference number: 5 (lower is better)
Translates to: TGEMLIGETSLREDEEEVRADIM*LHWKPV
Trigger: CACAGGTTTCCAGTGCAACAACATGATGTCAGCCCT...TACCTCCTCCTCGTCTTCCCTGAGGGAGGTCTCACCAATCAGCATCTCACCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR CAA 90 bp TCCAAGATTATCTTGCTCTGCCTTTCCTCAACCCAGAAGCTCCAGGAACACCTTAGGCGGTCCAGGAAGTaGCTAGGCAGGGCTGACATC +
Preference number: 5 (lower is better)
Translates to: SKIILLCLSSTQKLQEHLRRSRK*LGRADI
Trigger: GATGTCAGCCCTGCCTAGCAACTTCCTGGACCGCCT...AAGGTGTTCCTGGAGCTTCTGGGTTGAGGAAAGGCAGAGCAAGATAATCTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CAA 90 bp CACTGTCAGCACCGAGCAACATTGGATATTCACCTGCAGGGTGCTAGGGAACTGGTCAGCTTCTCCATGTaGGTCTTCACCAGACCATCC +
Preference number: 5 (lower is better)
Translates to: HCQHRATLDIHLQGARELVSFSM*VFTRPS
Trigger: GGATGGTCTGGTGAAGACCAACATGGAGAAGCTGAC...CAGTTCCCTAGCACCCTGCAGGTGAATATCCAATGTTGCTCGGTGCTGACAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CAA 90 bp CATGATTCTCTGCCCCTGGCTGACACAAGAGAAGACAAAGAGGGCACAGGTGAGGTCAGCTTCTCCATGTaGGTCTTCACCAGACCATCC +
Preference number: 5 (lower is better)
Translates to: HDSLPLADTREDKEGTGEVSFSM*VFTRPS
Trigger: GGATGGTCTGGTGAAGACCAACATGGAGAAGCTGAC...CTCACCTGTGCCCTCTTTGTCTTCTCTTGTGTCAGCCAGGGGCAGAGAATCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CAA 90 bp CCATCCAGCTCCGTCCTCTGGGGAGGACATGCCCTTCACTCAAAACACCAAGTATGGCTTCTGATATCCTaGAGCCCCAAAACACCACTC +
Preference number: 5 (lower is better)
Translates to: PSSSVLWGGHALHSKHQVWLLIS*SPKTPL
Trigger: GAGTGGTGTTTTGGGGCTCAAGGATATCAGAAGCCA...TACTTGGTGTTTTGAGTGAAGGGCATGTCCTCCCCAGAGGACGGAGCTGGATGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CAA 90 bp AAGGGGTCTCCATGGCTCCTCCCAAGCCACAAGCGTTGCCAGGTGGTGCTGATGAAAAGAAGCACATTTTaGCTAAGCGGCAGTGATGGA +
Preference number: 5 (lower is better)
Translates to: KGSPWLLPSHKRCQVVLMKRSTF*LSGSDG
Trigger: TCCATCACTGCCGCTTAGCAAAAATGTGCTTCTTTT...CATCAGCACCACCTGGCAACGCTTGTGGCTTGGGAGGAGCCATGGAGACCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR CAA 90 bp GTCAGGCTGGGAGCCTTTTCCATAGGAGGTGATGTGGGCAAATCTTGGGGACCCCCACACACACCGCTTTaGTTAATTCCGCAAATGCTG +
Preference number: 5 (lower is better)
Translates to: VRLGAFSIGGDVGKSWGPPHTPL*LIPQML
Trigger: CAGCATTTGCGGAATTAACAAAAGCGGTGTGTGTGG...GGGTCCCCAAGATTTGCCCACATCACCTCCTATGGAAAAGGCTCCCAGCCTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000402191.5
CDS-3UTR CAA 90 bp TTTACTTGTCCAATTAGCCCAAGTCAGAGCTTCCTTCCGTGGGAAGGTTCTGGATGGCTTACAGCAGCCTaGACCTCCCAGGCTCAGGTG +
Preference number: 5 (lower is better)
Translates to: FTCPISPSQSFLPWEGSGWLTAA*TSQAQV
Trigger: CACCTGAGCCTGGGAGGTCAAGGCTGCTGTAAGCCA...TCCAGAACCTTCCCACGGAAGGAAGCTCTGACTTGGGCTAATTGGACAAGTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CAA 90 bp GTCAGCACCGAGCAACATTGGATATTCACCTGCAGGGTGCTAGGGAACTGTGTGCATCTGGGGAAAGGCTaGATGTCAAAGCTGTCCTCC +
Preference number: 5 (lower is better)
Translates to: VSTEQHWIFTCRVLGNCVHLGKG*MSKLSS
Trigger: GGAGGACAGCTTTGACATCAAGCCTTTCCCCAGATG...CACACAGTTCCCTAGCACCCTGCAGGTGAATATCCAATGTTGCTCGGTGCTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS GCA 90 bp AGCCATAGAGCGCCTCGTAGTGTTTCTGCACGTTTGTTTCCTCCTTaGAGCTCAGGTAGATGTGTCTGTAGAGCTGCTGGGAGTGCTTCT +
Preference number: 5 (lower is better)
Translates to: SHRAPRSVSARLFPP*SSGRCVCRAAGSAS
Trigger: AGAAGCACTCCCAGCAGCTCTACAGACACATCTACCTGAGCTGCAAGGAGGAAACAAACGTGCAGAAACACTACGAGGCGCTCTATGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264719.5
ENST00000401432.7
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR CAA 90 bp CAAGGCGCTGGGGACTCCATGGCAAGGAAAACAGAGGGAGCCTCGGGACCACACCCTGACATTCGAATTTaGGTCTTGATTTCTAAGTCA +
Preference number: 5 (lower is better)
Translates to: QGAGDSMARKTEGASGPHPDIRI*VLISKS
Trigger: TGACTTAGAAATCAAGACCAAAATTCGAATGTCAGG...GTGTGGTCCCGAGGCTCCCTCTGTTTTCCTTGCCATGGAGTCCCCAGCGCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR CAA 90 bp CACCTTGGCTTAGCCTGGGAGGCGCTGCCATCTAAGGTGATGTTTTCTCAGAGATGTGGGTCCCAGATATaGGCCTGCAGTTCATCATTC +
Preference number: 5 (lower is better)
Translates to: HLGLAWEALPSKVMFSQRCGSQI*ACSSSF
Trigger: GAATGATGAACTGCAGGCCAATATCTGGGACCCACA...TCTCTGAGAAAACATCACCTTAGATGGCAGCGCCTCCCAGGCTAAGCCAAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR CAA 90 bp AGACGAGGAGGAGGTAGGAGGGCCAAGAAGGACCAGAGAGTCTCCACCTTGGCTTCTACATGCTGTAGATaGAAAAGCAGTGATGGAACG +
Preference number: 5 (lower is better)
Translates to: RRGGGRRAKKDQRVSTLASTCCR*KSSDGT
Trigger: CGTTCCATCACTGCTTTTCAATCTACAGCATGTAGA...AGCCAAGGTGGAGACTCTCTGGTCCTTCTTGGCCCTCCTACCTCCTCCTCGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR CAA 90 bp GTCAGGCTGGGAGCCTTTTCCATAGGAGGTGATGTGGGCAAATCTTGGGGACCCTGGATGAGAACAGGCTaGATGGCGTTTTTGATGTTG +
Preference number: 5 (lower is better)
Translates to: VRLGAFSIGGDVGKSWGPWMRTG*MAFLML
Trigger: CAACATCAAAAACGCCATCAAGCCTGTTCTCATCCA...GGGTCCCCAAGATTTGCCCACATCACCTCCTATGGAAAAGGCTCCCAGCCTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CAA 90 bp CCATCCAGCTCCGTCCTCTGGGGAGGACATGCCCTTCACTCAAAACACCAAGTAGCTGACATCATGTTGTaGCACTGGAAACCTGTGGAT +
Preference number: 5 (lower is better)
Translates to: PSSSVLWGGHALHSKHQVADIML*HWKPVD
Trigger: ATCCACAGGTTTCCAGTGCAACAACATGATGTCAGC...TACTTGGTGTTTTGAGTGAAGGGCATGTCCTCCCCAGAGGACGGAGCTGGATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CAA 90 bp CATGATTCTCTGCCCCTGGCTGACACAAGAGAAGACAAAGAGGGCACAGGTGAGAGGGCTGACATCATGTaGTTGCACTGGAAACCTGTG +
Preference number: 5 (lower is better)
Translates to: HDSLPLADTREDKEGTGERADIM*LHWKPV
Trigger: CACAGGTTTCCAGTGCAACAACATGATGTCAGCCCT...CTCACCTGTGCCCTCTTTGTCTTCTCTTGTGTCAGCCAGGGGCAGAGAATCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CAA 90 bp CTGGATGATGACAGTGTTCCACTCTCTCATCCAGGCGTGGTTGCGTGGGCATACCCAATGCTCCTCCTCTaGGATAAACGATCCTCATCT +
Preference number: 5 (lower is better)
Translates to: LDDDSVPLSHPGVVAWAYPMLLL*DKRSSS
Trigger: AGATGAGGATCGTTTATCCAAGAGGAGGAGCATTGG...GTATGCCCACGCAACCACGCCTGGATGAGAGAGTGGAACACTGTCATCATCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CAA 90 bp ACAGGTGAGATGCTGATTGGTGAGACCTCCCTCAGGGAAGACGAGGAGGAGGTACCAATGCTCCTCCTCTaGGATAAACGATCCTCATCT +
Preference number: 5 (lower is better)
Translates to: TGEMLIGETSLREDEEEVPMLLL*DKRSSS
Trigger: AGATGAGGATCGTTTATCCAAGAGGAGGAGCATTGG...TACCTCCTCCTCGTCTTCCCTGAGGGAGGTCTCACCAATCAGCATCTCACCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR CAA 90 bp GATGTGGGCAAATCTTGGGGACCCTGTAGTTCCCCTCCAAGATTATCTTGCTCTAGCTTGGCCACCATCTaGAGGAAGCTCTCCACGAAG +
Preference number: 5 (lower is better)
Translates to: DVGKSWGPCSSPPRLSCSSLATI*RKLSTK
Trigger: CTTCGTGGAGAGCTTCCTCAAGATGGTGGCCAAGCT...AGAGCAAGATAATCTTGGAGGGGAACTACAGGGTCCCCAAGATTTGCCCACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CAA 90 bp ATTACGAGATATGGGCTACAGCATTTGTGGATTCACAACTCTGCCTCCACGCGCGGCCGGGAAGGGGAATaGGCAAAGAAGGCAACAAAC +
Preference number: 5 (lower is better)
Translates to: ITRYGLQHLWIHNSASTRGREGE*AKKATN
Trigger: GTTTGTTGCCTTCTTTGCCAATTCCCCTTCCCGGCC...GCGCGTGGAGGCAGAGTTGTGAATCCACAAATGCTGTAGCCCATATCTCGTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR CAA 90 bp TTTACTTGTCCAATTAGCCCAAGTCAGAGCTTCCTTCCGTGGGAAGGTTCTGGACAGTTAGGGGGAGGCTaGATCCTGACCCCTAGAGAC +
Preference number: 5 (lower is better)
Translates to: FTCPISPSQSFLPWEGSGQLGGG*ILTPRD
Trigger: GTCTCTAGGGGTCAGGATCAAGCCTCCCCCTAACTG...TCCAGAACCTTCCCACGGAAGGAAGCTCTGACTTGGGCTAATTGGACAAGTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CAA 90 bp ACTTATCCTCTGTACGTCCATCCATTCATCCACTGTCAGCACCGAGCAACATTGCCGATGCCTAACGCATaGGAGGTTCCCAGTCCTTGG +
Preference number: 5 (lower is better)
Translates to: TYPLYVHPFIHCQHRATLPMPNA*EVPSPW
Trigger: CCAAGGACTGGGAACCTCCAATGCGTTAGGCATCGG...CAATGTTGCTCGGTGCTGACAGTGGATGAATGGATGGACGTACAGAGGATAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CAA 90 bp GAGGAGGAGGTAGGAGGGCCAAGAAGGACCAGAGAGTCTCCACCTTGGCTTAGCTCTTTCCCATCCCACTaGATCAGGAAAACACATTTC +
Preference number: 5 (lower is better)
Translates to: EEEVGGPRRTRESPPWLSSFPSH*IRKTHF
Trigger: GAAATGTGTTTTCCTGATCAAGTGGGATGGGAAAGA...GCTAAGCCAAGGTGGAGACTCTCTGGTCCTTCTTGGCCCTCCTACCTCCTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405108.5
CDS GCA 90 bp TGTTCCTCGATTCTACCTCCACCTGCAGGGAGATGGTCTCTCCAATaGTCCTCCTCTTGGATAAACGATCCTCATCTGTCAGCTGAGGAA +
Preference number: 5 (lower is better)
Translates to: CSSILPPPAGRWSLQ*SSSWINDPHLSAEE
Trigger: TTCCTCAGCTGACAGATGAGGATCGTTTATCCAAGAGGAGGAGCATTGGAGAGACCATCTCCCTGCAGGTGGAGGTAGAATCGAGGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264719.5
ENST00000401432.7
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR CAA 90 bp GCTCTGCCTTTCCTCAACCCAGAAGCTCCAGGAACACCTTGGGACCCTCAGAAGTCTACATGCTGTAGATaGAAAAGCAGTGATGGAACG +
Preference number: 5 (lower is better)
Translates to: ALPFLNPEAPGTPWDPQKSTCCR*KSSDGT
Trigger: CGTTCCATCACTGCTTTTCAATCTACAGCATGTAGA...CTTCTGAGGGTCCCAAGGTGTTCCTGGAGCTTCTGGGTTGAGGAAAGGCAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CAA 90 bp TGGCTCTGTAGCTGTGTAAGCATTTCGCCTTGCGCTTCTGAGTCACTTCACTCCAGGGCTGACATCATGTaGTTGCACTGGAAACCTGTG +
Preference number: 5 (lower is better)
Translates to: WLCSCVSISPCASESLHSRADIM*LHWKPV
Trigger: CACAGGTTTCCAGTGCAACAACATGATGTCAGCCCT...GGAGTGAAGTGACTCAGAAGCGCAAGGCGAAATGCTTACACAGCTACAGAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CAA 90 bp CCTGAGAGACACCCCATGATTCTCTGCCCCTGGCTGACACAAGAGAAGACAAAGAGTGTTTCTGCACGTTaGTTTCCTCCTTGCAGCTCA +
Preference number: 5 (lower is better)
Translates to: PERHPMILCPWLTQEKTKSVSAR*FPPCSS
Trigger: TGAGCTGCAAGGAGGAAACAAACGTGCAGAAACACT...CTTTGTCTTCTCTTGTGTCAGCCAGGGGCAGAGAATCATGGGGTGTCTCTCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CAA 90 bp CACCTTGGCTTAGCCTGGGAGGCGCTGCCATCTAAGGTGATGTTTTCTCAGAGAAGTGTTTCTGCACGTTaGTTTCCTCCTTGCAGCTCA +
Preference number: 5 (lower is better)
Translates to: HLGLAWEALPSKVMFSQRSVSAR*FPPCSS
Trigger: TGAGCTGCAAGGAGGAAACAAACGTGCAGAAACACT...TCTCTGAGAAAACATCACCTTAGATGGCAGCGCCTCCCAGGCTAAGCCAAGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR CAA 90 bp CATGATTCTCTGCCCCTGGCTGACACAAGAGAAGACAAAGAGGGCACAGGTGAGCCAATGCTCCTCCTCTaGGATAAACGATCCTCATCT +
Preference number: 5 (lower is better)
Translates to: HDSLPLADTREDKEGTGEPMLLL*DKRSSS
Trigger: AGATGAGGATCGTTTATCCAAGAGGAGGAGCATTGG...CTCACCTGTGCCCTCTTTGTCTTCTCTTGTGTCAGCCAGGGGCAGAGAATCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CAA 90 bp AAATCTTGGGGACCCTGTAGTTCCCCTCCAAGATTATCTTGCTCTGCCTTTCCTTTGTCAACCAGCCTTTaGTACCTGGGGCGTAGGGCA +
Preference number: 5 (lower is better)
Translates to: KSWGPCSSPPRLSCSAFPLSTSL*YLGRRA
Trigger: TGCCCTACGCCCCAGGTACAAAAGGCTGGTTGACAA...AGGAAAGGCAGAGCAAGATAATCTTGGAGGGGAACTACAGGGTCCCCAAGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CAA 90 bp TTAGGGCAGGAAATGACTCTGTATGGTACTCTGGTGGGGGATGCATGTCATTACAGCTTGGCCACCATCTaGAGGAAGCTCTCCACGAAG +
Preference number: 5 (lower is better)
Translates to: LGQEMTLYGTLVGDACHYSLATI*RKLSTK
Trigger: CTTCGTGGAGAGCTTCCTCAAGATGGTGGCCAAGCT...GTAATGACATGCATCCCCCACCAGAGTACCATACAGAGTCATTTCCTGCCCTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CAA 90 bp AAATCTTGGGGACCCTGTAGTTCCCCTCCAAGATTATCTTGCTCTGCCTTTCCTTCTGACTCCAGCAGCTaGGCCACCATCTTGAGGAAG +
Preference number: 5 (lower is better)
Translates to: KSWGPCSSPPRLSCSAFPSDSSS*ATILRK
Trigger: CTTCCTCAAGATGGTGGCCAAGCTGCTGGAGTCAGA...AGGAAAGGCAGAGCAAGATAATCTTGGAGGGGAACTACAGGGTCCCCAAGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CAA 90 bp AAATCTTGGGGACCCTGTAGTTCCCCTCCAAGATTATCTTGCTCTGCCTTTCCTGTTCTCCTCATTGACTaGGGCCACGTCCTGAACAGC +
Preference number: 5 (lower is better)
Translates to: KSWGPCSSPPRLSCSAFPVLLID*GHVLNS
Trigger: GCTGTTCAGGACGTGGCCCAAGTCAATGAGGAGAAC...AGGAAAGGCAGAGCAAGATAATCTTGGAGGGGAACTACAGGGTCCCCAAGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CAA 90 bp CATGATTCTCTGCCCCTGGCTGACACAAGAGAAGACAAAGAGGGCACAGGTGAGTATGGGCTACAGCATTaGTGGATTCACAACTCTGCC +
Preference number: 5 (lower is better)
Translates to: HDSLPLADTREDKEGTGEYGLQH*WIHNSA
Trigger: GGCAGAGTTGTGAATCCACAAATGCTGTAGCCCATA...CTCACCTGTGCCCTCTTTGTCTTCTCTTGTGTCAGCCAGGGGCAGAGAATCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR CAA 90 bp ACTTATCCTCTGTACGTCCATCCATTCATCCACTGTCAGCACCGAGCAACATTGAGGGTCTCTTACCTCTaGGGAAGGGAGAATCGCCAC +
Preference number: 5 (lower is better)
Translates to: TYPLYVHPFIHCQHRATLRVSYL*GRENRH
Trigger: GTGGCGATTCTCCCTTCCCAAGAGGTAAGAGACCCT...CAATGTTGCTCGGTGCTGACAGTGGATGAATGGATGGACGTACAGAGGATAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CAA 90 bp TCACCAACCAAGTCTCCATCCAGCTCCGTCCTCTGGGGAGGACATGCCCTTCACCCTGACATTCGAATTTaGGTCTTGATTTCTAAGTCA +
Preference number: 5 (lower is better)
Translates to: SPTKSPSSSVLWGGHALHPDIRI*VLISKS
Trigger: TGACTTAGAAATCAAGACCAAAATTCGAATGTCAGG...GTGAAGGGCATGTCCTCCCCAGAGGACGGAGCTGGATGGAGACTTGGTTGGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CAA 90 bp AGACGAGGAGGAGGTAGGAGGGCCAAGAAGGACCAGAGAGTCTCCACCTTGGCTCCTGACATTCGAATTTaGGTCTTGATTTCTAAGTCA +
Preference number: 5 (lower is better)
Translates to: RRGGGRRAKKDQRVSTLAPDIRI*VLISKS
Trigger: TGACTTAGAAATCAAGACCAAAATTCGAATGTCAGG...AGCCAAGGTGGAGACTCTCTGGTCCTTCTTGGCCCTCCTACCTCCTCCTCGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR CAA 90 bp GCATCTGGGGAAAGGCTTGATGTCAAAGCTGTCCTCCATGTCTATATCAGCCCTACCCCTTGCAGGCCTTaGATGCCTGACATTCGAATT +
Preference number: 5 (lower is better)
Translates to: ASGERLDVKAVLHVYISPTPCRP*MPDIRI
Trigger: AATTCGAATGTCAGGCATCAAAGGCCTGCAAGGGGT...AGGGCTGATATAGACATGGAGGACAGCTTTGACATCAAGCCTTTCCCCAGATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CAA 90 bp GCATCTGGGGAAAGGCTTGATGTCAAAGCTGTCCTCCATGTCTATATCAGCCCTTGTGGGTCCCAGATATaGGCCTGCAGTTCATCATTC +
Preference number: 5 (lower is better)
Translates to: ASGERLDVKAVLHVYISPCGSQI*ACSSSF
Trigger: GAATGATGAACTGCAGGCCAATATCTGGGACCCACA...AGGGCTGATATAGACATGGAGGACAGCTTTGACATCAAGCCTTTCCCCAGATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CAA 90 bp TTTACTTGTCCAATTAGCCCAAGTCAGAGCTTCCTTCCGTGGGAAGGTTCTGGATCCTGTCGAGAGCACTaGTCCACTTTCAGCTTCAGG +
Preference number: 5 (lower is better)
Translates to: FTCPISPSQSFLPWEGSGSCREH*STFSFR
Trigger: CCTGAAGCTGAAAGTGGACAAGTGCTCTCGACAGGA...TCCAGAACCTTCCCACGGAAGGAAGCTCTGACTTGGGCTAATTGGACAAGTAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CAA 90 bp CTCAACCCAGAAGCTCCAGGAACACCTTGGGACCCTCAGAAGAAAGACATCAAAGTGTCCTCCTCGATGTaGGCAAACTTCACAAACGAG +
Preference number: 5 (lower is better)
Translates to: LNPEAPGTPWDPQKKDIKVSSSM*ANFTNE
Trigger: CTCGTTTGTGAAGTTTGCCAACATCGAGGAGGACAC...TTTGATGTCTTTCTTCTGAGGGTCCCAAGGTGTTCCTGGAGCTTCTGGGTTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CAA 90 bp GTAGTTCCCCTCCAAGATTATCTTGCTCTGCCTTTCCTCAACCCAGAAGCTCCAGTGTCCTCCTCGATGTaGGCAAACTTCACAAACGAG +
Preference number: 5 (lower is better)
Translates to: VVPLQDYLALPFLNPEAPVSSSM*ANFTNE
Trigger: CTCGTTTGTGAAGTTTGCCAACATCGAGGAGGACAC...TGGAGCTTCTGGGTTGAGGAAAGGCAGAGCAAGATAATCTTGGAGGGGAACTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CAA 90 bp TTCCACTCTCTCATCCAGGCGTGGTTGCGTGGGCATACACACTTTATGAAAATTGTTCTCCTCATTGACTaGGGCCACGTCCTGAACAGC +
Preference number: 5 (lower is better)
Translates to: FHSLIQAWLRGHTHFMKIVLLID*GHVLNS
Trigger: GCTGTTCAGGACGTGGCCCAAGTCAATGAGGAGAAC...AATTTTCATAAAGTGTGTATGCCCACGCAACCACGCCTGGATGAGAGAGTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CAA 90 bp AAATCTTGGGGACCCTGTAGTTCCCCTCCAAGATTATCTTGCTCTGCCTTTCCTAGCTCCAGGAACACCTaGGGACCCTCAGAAGAAAGA +
Preference number: 5 (lower is better)
Translates to: KSWGPCSSPPRLSCSAFPSSRNT*GPSEER
Trigger: TCTTTCTTCTGAGGGTCCCAAGGTGTTCCTGGAGCT...AGGAAAGGCAGAGCAAGATAATCTTGGAGGGGAACTACAGGGTCCCCAAGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CAA 90 bp CCATCCAGCTCCGTCCTCTGGGGAGGACATGCCCTTCACTCAAAACACCAAGTAAAGGAAGAGCTTCATTaGAAGTGCCAAAACTATGGG +
Preference number: 5 (lower is better)
Translates to: PSSSVLWGGHALHSKHQVKEELH*KCQNYG
Trigger: CCCATAGTTTTGGCACTTCAAATGAAGCTCTTCCTT...TACTTGGTGTTTTGAGTGAAGGGCATGTCCTCCCCAGAGGACGGAGCTGGATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR CAA 90 bp AGATTTGGGGTAAGGGGCCACTCTAACCAGAAGATTTCTAGGGTTAATGGGATGGGCTTGATGGCGTTTTaGATGTTGCCAAAGGCAGCC +
Preference number: 5 (lower is better)
Translates to: RFGVRGHSNQKISRVNGMGLMAF*MLPKAA
Trigger: GGCTGCCTTTGGCAACATCAAAAACGCCATCAAGCC...CATCCCATTAACCCTAGAAATCTTCTGGTTAGAGTGGCCCCTTACCCCAAATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR CAA 90 bp GTAGTTCCCCTCCAAGATTATCTTGCTCTGCCTTTCCTCAACCCAGAAGCTCCAGAGGAGCTCAGGCTCTaGGAATTCAGTATACACACA +
Preference number: 5 (lower is better)
Translates to: VVPLQDYLALPFLNPEAPEELRL*EFSIHT
Trigger: TGTGTGTATACTGAATTCCAAGAGCCTGAGCTCCTC...TGGAGCTTCTGGGTTGAGGAAAGGCAGAGCAAGATAATCTTGGAGGGGAACTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CAA 90 bp GTCAGGCTGGGAGCCTTTTCCATAGGAGGTGATGTGGGCAAATCTTGGGGACCCGAGGAAAGAACATGTTaGTGGCTCAAGATTTCAATT +
Preference number: 5 (lower is better)
Translates to: VRLGAFSIGGDVGKSWGPEERTC*WLKISI
Trigger: AATTGAAATCTTGAGCCACAAACATGTTCTTTCCTC...GGGTCCCCAAGATTTGCCCACATCACCTCCTATGGAAAAGGCTCCCAGCCTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR CAA 90 bp CTGGGCAAGAGCAGGGAGAGAGAAGTTTATGAGGAAACTGAACAGGGGCCGGGCCACCAGGATTCAGATTaGACCAAACAAGCATTTATT +
Preference number: 5 (lower is better)
Translates to: LGKSREREVYEETEQGPGHQDSD*TKQAFI
Trigger: AATAAATGCTTGTTTGGTCAAATCTGAATCCTGGTG...GCCCGGCCCCTGTTCAGTTTCCTCATAAACTTCTCTCTCCCTGCTCTTGCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CAA 90 bp TGGCTCTGTAGCTGTGTAAGCATTTCGCCTTGCGCTTCTGAGTCACTTCACTCCTCTACATGCTGTAGATaGAAAAGCAGTGATGGAACG +
Preference number: 5 (lower is better)
Translates to: WLCSCVSISPCASESLHSSTCCR*KSSDGT
Trigger: CGTTCCATCACTGCTTTTCAATCTACAGCATGTAGA...GGAGTGAAGTGACTCAGAAGCGCAAGGCGAAATGCTTACACAGCTACAGAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CAA 90 bp GTAGTTCCCCTCCAAGATTATCTTGCTCTGCCTTTCCTCAACCCAGAAGCTCCATGGATGAGAACAGGCTaGATGGCGTTTTTGATGTTG +
Preference number: 5 (lower is better)
Translates to: VVPLQDYLALPFLNPEAPWMRTG*MAFLML
Trigger: CAACATCAAAAACGCCATCAAGCCTGTTCTCATCCA...TGGAGCTTCTGGGTTGAGGAAAGGCAGAGCAAGATAATCTTGGAGGGGAACTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CAA 90 bp TCCAAGATTATCTTGCTCTGCCTTTCCTCAACCCAGAAGCTCCAGGAACACCTTAGTGTTTCTGCACGTTaGTTTCCTCCTTGCAGCTCA +
Preference number: 5 (lower is better)
Translates to: SKIILLCLSSTQKLQEHLSVSAR*FPPCSS
Trigger: TGAGCTGCAAGGAGGAAACAAACGTGCAGAAACACT...AAGGTGTTCCTGGAGCTTCTGGGTTGAGGAAAGGCAGAGCAAGATAATCTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CAA 90 bp AGAGGAATTGGGAAAAATAGACTCACTTCTGCAGGGCACTCTCTGTCACCAGGTCCAATGCTCCTCCTCTaGGATAAACGATCCTCATCT +
Preference number: 5 (lower is better)
Translates to: RGIGKNRLTSAGHSLSPGPMLLL*DKRSSS
Trigger: AGATGAGGATCGTTTATCCAAGAGGAGGAGCATTGG...ACCTGGTGACAGAGAGTGCCCTGCAGAAGTGAGTCTATTTTTCCCAATTCCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR CAA 90 bp CATTTTACTTGTCCAATTAGCCCAAGTCAGAGCTTCCTTCCGTGGGAAGGTTCTGTGTCCTCCTCGATGTaGGCAAACTTCACAAACGAG +
Preference number: 5 (lower is better)
Translates to: HFTCPISPSQSFLPWEGSVSSSM*ANFTNE
Trigger: CTCGTTTGTGAAGTTTGCCAACATCGAGGAGGACAC...AGAACCTTCCCACGGAAGGAAGCTCTGACTTGGGCTAATTGGACAAGTAAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CAA 90 bp AAATCTTGGGGACCCTGTAGTTCCCCTCCAAGATTATCTTGCTCTGCCTTTCCTGAGGAGCTCAGGCTCTaGGAATTCAGTATACACACA +
Preference number: 5 (lower is better)
Translates to: KSWGPCSSPPRLSCSAFPEELRL*EFSIHT
Trigger: TGTGTGTATACTGAATTCCAAGAGCCTGAGCTCCTC...AGGAAAGGCAGAGCAAGATAATCTTGGAGGGGAACTACAGGGTCCCCAAGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000402191.5
ENST00000403714.8
CDS-3UTR CAA 90 bp AGATTTGGGGTAAGGGGCCACTCTAACCAGAAGATTTCTAGGGTTAATGGGATGAAGGAAAGGGCAATTTaGGACCACATGGCACTGCCA +
Preference number: 5 (lower is better)
Translates to: RFGVRGHSNQKISRVNGMKERAI*DHMALP
Trigger: TGGCAGTGCCATGTGGTCCAAAATTGCCCTTTCCTT...CATCCCATTAACCCTAGAAATCTTCTGGTTAGAGTGGCCCCTTACCCCAAATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS-3UTR CAA 90 bp ACTTATCCTCTGTACGTCCATCCATTCATCCACTGTCAGCACCGAGCAACATTGTGGGGTCTCCTTATATaGCCCCAGATCATCTCAAAC +
Preference number: 5 (lower is better)
Translates to: TYPLYVHPFIHCQHRATLWGLLI*PQIISN
Trigger: GTTTGAGATGATCTGGGGCAATATAAGGAGACCCCA...CAATGTTGCTCGGTGCTGACAGTGGATGAATGGATGGACGTACAGAGGATAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CAA 90 bp AGAGGAATTGGGAAAAATAGACTCACTTCTGCAGGGCACTCTCTGTCACCAGGTTCTACATGCTGTAGATaGAAAAGCAGTGATGGAACG +
Preference number: 5 (lower is better)
Translates to: RGIGKNRLTSAGHSLSPGSTCCR*KSSDGT
Trigger: CGTTCCATCACTGCTTTTCAATCTACAGCATGTAGA...ACCTGGTGACAGAGAGTGCCCTGCAGAAGTGAGTCTATTTTTCCCAATTCCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000403714.8
CDS TCA 90 bp ATGTCACTGAGGGTACTGATGGTAGAGAACTTGTGGCGGTTGCCATaGCGATCAATGAAACTGATGAGAATCTCTAGAACAAAGAGTCGA +
Preference number: 5 (lower is better)
Translates to: MSLRVLMVENLWRLP*RSMKLMRISRTKSR
Trigger: TCGACTCTTTGTTCTAGAGATTCTCATCAGTTTCATTGATCGTCATGGCAACCGCCACAAGTTCTCTACCATCAGTACCCTCAGTGACAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264719.5
ENST00000401432.7
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS-3UTR CAA 90 bp GCAAAAGCAGCAGACACAGAACAGAATGATTTCATTGATATAAAGTTCCAGAAGCAGCACCGAGCAACATaGGATATTCACCTGCAGGGT +
Preference number: 5 (lower is better)
Translates to: AKAADTEQNDFIDIKFQKQHRAT*DIHLQG
Trigger: ACCCTGCAGGTGAATATCCAATGTTGCTCGGTGCTG...CTTCTGGAACTTTATATCAATGAAATCATTCTGTTCTGTGTCTGCTGCTTTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS-3UTR CAA 90 bp GCAAAAGCAGCAGACACAGAACAGAATGATTTCATTGATATAAAGTTCCAGAAGGCTGACATCATGTTGTaGCACTGGAAACCTGTGGAT +
Preference number: 5 (lower is better)
Translates to: AKAADTEQNDFIDIKFQKADIML*HWKPVD
Trigger: ATCCACAGGTTTCCAGTGCAACAACATGATGTCAGC...CTTCTGGAACTTTATATCAATGAAATCATTCTGTTCTGTGTCTGCTGCTTTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS GCA 72 bp GCTGCCACACGACCACCTCCTCCAGCACTCCCGGTCTaGTCGGCTCCGGGAGACCCGCTTTCCCCTGAGCCT +
Preference number: 6 (lower is better)
Translates to: AATRPPPPALPV*SAPGDPLSPEP
Trigger: AGGCTCAGGGGAAAGCGGGTCTCCCGGAGCCGAGCAGACCGGGAGTGCTGGAGGAGGTGGTCGTGTGGCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402191.5
CDS CAA 90 bp AAGACTTCCACGATGCCCGCGCGCACCGTCGCAGCGCTGCGGCTGTaGGCGTCCAGGTGGCCCAGGAGCTGCTGGATGACCAGGTGTGAG +
Preference number: 6 (lower is better)
Translates to: KTSTMPARTVAALRL*ASRWPRSCWMTRCE
Trigger: CTCACACCTGGTCATCCAGCAGCTCCTGGGCCACCTGGACGCCAACAGCCGCAGCGCTGCGACGGTGCGCGCGGGCATCGTGGAAGTCTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264719.5
ENST00000401432.7
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS TCA 72 bp CCAGTACTGTGGGCCCCACAGAGCCGGTGGCAGCGATaGCCGCGGCTTCCGACAAGACTTCCACGATGCCCG +
Preference number: 6 (lower is better)
Translates to: PVLWAPQSRWQR*PRLPTRLPRCP
Trigger: CGGGCATCGTGGAAGTCTTGTCGGAAGCCGCGGTCATCGCTGCCACCGGCTCTGTGGGGCCCACAGTACTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264719.5
ENST00000401432.7
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS GCA 72 bp CCTGGAGTCCAGCGTCCAATCTACAGGAGGTGGGGCTaGCCCAGGACGGTGGCACGGACACTCACCTCCTCC +
Preference number: 6 (lower is better)
Translates to: PGVQRPIYRRWG*PRTVARTLTSS
Trigger: GGAGGAGGTGAGTGTCCGTGCCACCGTCCTGGGGCAGCCCCACCTCCTGTAGATTGGACGCTGGACTCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401432.7
CDS CCA 72 bp CCCCGTCCTGCCTGTGTCCACCGCCTGGTGCAGGGATaGCCGCGGGACCTTGCTCATGATGAAGAGGATCAC +
Preference number: 6 (lower is better)
Translates to: PRPACVHRLVQG*PRDLAHDEEDH
Trigger: GTGATCCTCTTCATCATGAGCAAGGTCCCGCGGCCATCCCTGCACCAGGCGGTGGACACAGGCAGGACGGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264719.5
ENST00000401432.7
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS CAA 72 bp GTGTCCACCGCCTGGTGCAGGGATGGCCGCGGGACCTaGCTCATGATGAAGAGGATCACCTCGGAGCGCTGG +
Preference number: 6 (lower is better)
Translates to: VSTAWCRDGRGT*LMMKRITSERW
Trigger: CCAGCGCTCCGAGGTGATCCTCTTCATCATGAGCAAGGTCCCGCGGCCATCCCTGCACCAGGCGGTGGACAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264719.5
ENST00000401432.7
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS GCA 72 bp CACCTGCCGCCGCCGCTCACGCTCCTGCTCCTCCACTaGTACGCTGTCCACAATGGCTTTCTTCAGTGTCTC +
Preference number: 6 (lower is better)
Translates to: HLPPPLTLLLLH*YAVHNGFLQCL
Trigger: GAGACACTGAAGAAAGCCATTGTGGACAGCGTAGCAGTGGAGGAGCAGGAGCGTGAGCGGCGGCGGCAGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264719.5
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS TCA 72 bp GGCTGTTGGCGTCCAGGTGGCCCAGGAGCTGCTGGATaGCCAGGTGTGAGTGCTGCGGCTGAATTGAGTACA +
Preference number: 6 (lower is better)
Translates to: GCWRPGGPGAAG*PGVSAAAELST
Trigger: TGTACTCAATTCAGCCGCAGCACTCACACCTGGTCATCCAGCAGCTCCTGGGCCACCTGGACGCCAACAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264719.5
ENST00000401432.7
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS GCA 72 bp TTTGCTCTGGAGCAGCGATGCCCGGGCCCCGCAGTGTaGAGCAATCTCCTCGAAGGGTGCCTTCTGGAACTT +
Preference number: 6 (lower is better)
Translates to: FALEQRCPGPAV*SNLLEGCLLEL
Trigger: AAGTTCCAGAAGGCACCCTTCGAGGAGATTGCTGCACACTGCGGGGCCCGGGCATCGCTGCTCCAGAGCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264719.5
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS CCA 72 bp CCTCAGGGAAGATGTTGTCAACCAGCCTTTTGTACCTaGGGCGTAGGGCACCACAGCAGCCACACACACCGC +
Preference number: 6 (lower is better)
Translates to: PQGRCCQPAFCT*GVGHHSSHTHR
Trigger: GCGGTGTGTGTGGCTGCTGTGGTGCCCTACGCCCCAGGTACAAAAGGCTGGTTGACAACATCTTCCCTGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402191.5
CDS CAA 90 bp AGACCATCCTCGGGATCCTCAGGGAAGATGTTGTCAACCAGCCTTTaGTACCTGGGGCGTAGGGCACCACAGCAGCCACACACACCGTAC +
Preference number: 6 (lower is better)
Translates to: RPSSGSSGKMLSTSL*YLGRRAPQQPHTPY
Trigger: GTACGGTGTGTGTGGCTGCTGTGGTGCCCTACGCCCCAGGTACAAAAGGCTGGTTGACAACATCTTCCCTGAGGATCCCGAGGATGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000401432.7
ENST00000403714.8
CDS CAA 90 bp AGACCATCCTCGGGATCCTCAGGGAAGATGTTGTCAACCAGCCTTTaGTACCTGGGGCGTAGGGCACCACAGCAGCCACACACACCGCTT +
Preference number: 6 (lower is better)
Translates to: RPSSGSSGKMLSTSL*YLGRRAPQQPHTPL
Trigger: AAGCGGTGTGTGTGGCTGCTGTGGTGCCCTACGCCCCAGGTACAAAAGGCTGGTTGACAACATCTTCCCTGAGGATCCCGAGGATGGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402191.5
CDS TCA 72 bp GTTCTGCGGCTGACCGTAGGCTGCAGTGATGGTTCCTaGTGGGCTTGGTGGGGGCCGGATGGTGATTTCAAA +
Preference number: 6 (lower is better)
Translates to: VLRLTVGCSDGS*WAWWGPDGDFK
Trigger: TTTGAAATCACCATCCGGCCCCCACCAAGCCCATCAGGAACCATCACTGCAGCCTACGGTCAGCCGCAGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000264719.5
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS TCA 72 bp GGGCACAGCGGTTGTAGACAGGCAAGTTCTCCTCATTaGCTTGGGCCACGTCCTGAACAGCCAGCACCAGAC +
Preference number: 6 (lower is better)
Translates to: GHSGCRQASSPH*LGPRPEQPAPD
Trigger: GTCTGGTGCTGGCTGTTCAGGACGTGGCCCAAGTCAATGAGGAGAACTTGCCTGTCTACAACCGCTGTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000401432.7
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS CCA 72 bp CTGGCAAAGGAGCCCACGGTCTTGATGACGGCCTCCTaGAACATGCGCTCCTCGTGCTCCTTGATGATCTTG +
Preference number: 6 (lower is better)
Translates to: LAKEPTVLMTAS*NMRSSCSLMIL
Trigger: CAAGATCATCAAGGAGCACGAGGAGCGCATGTTCCAGGAGGCCGTCATCAAGACCGTGGGCTCCTTTGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264719.5
ENST00000401432.7
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS CCA 72 bp CCTCAGGGAAGATGTTGTCAACCAGCCTTTTGTACCTaGGGCGTAGGGCACCACAGCAGCCACACACACCGT +
Preference number: 6 (lower is better)
Translates to: PQGRCCQPAFCT*GVGHHSSHTHR
Trigger: ACGGTGTGTGTGGCTGCTGTGGTGCCCTACGCCCCAGGTACAAAAGGCTGGTTGACAACATCTTCCCTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000401432.7
ENST00000403714.8
CDS CAA 72 bp TCCATGAGGGCGGTGGAGAGAAGGCGGTCCAGGAAGTaGCTAGGCAGGGCTGACATCATGTTGTTGCACTGG +
Preference number: 6 (lower is better)
Translates to: SMRAVERRRSRK*LGRADIMLLHW
Trigger: CCAGTGCAACAACATGATGTCAGCCCTGCCTAGCAACTTCCTGGACCGCCTTCTCTCCACCGCCCTCATGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264719.5
ENST00000401432.7
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS TCA 72 bp CGAGTTGGTGCCGAGGATCTGCAGGTTGGGTTTCTCTaGCTCCAGCAGCTTGGCCACCATCTTGAGGAAGCT +
Preference number: 6 (lower is better)
Translates to: RVGAEDLQVGFL*LQQLGHHLEEA
Trigger: AGCTTCCTCAAGATGGTGGCCAAGCTGCTGGAGTCAGAGAAACCCAACCTGCAGATCCTCGGCACCAACTCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401432.7
ENST00000402191.5
ENST00000403714.8
CDS CCA 72 bp AGGAAGCTCTCCACGAAGAGGTTGATGCTCTGGCAGTaGCAGGCCATGAGCAGCTGGTCCAAAGCCTCCATA +
Preference number: 6 (lower is better)
Translates to: RKLSTKRLMLWQ*QAMSSWSKASI
Trigger: TATGGAGGCTTTGGACCAGCTGCTCATGGCCTGCCACTGCCAGAGCATCAACCTCTTCGTGGAGAGCTTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401432.7
ENST00000402191.5
ENST00000403714.8
CDS CAA 90 bp TTGGTGCCGAGGATCTGCAGGTTGGGTTTCTCTGACTCCAGCAGCTaGGCCACCATCTTGAGGAAGCTCTCCACGAAGAGGTTGATGCTC +
Preference number: 6 (lower is better)
Translates to: LVPRICRLGFSDSSS*ATILRKLSTKRLML
Trigger: GAGCATCAACCTCTTCGTGGAGAGCTTCCTCAAGATGGTGGCCAAGCTGCTGGAGTCAGAGAAACCCAACCTGCAGATCCTCGGCACCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401432.7
ENST00000402191.5
ENST00000403714.8
CDS TCA 72 bp ACACGTACCCATATCGATGGCGACCCACGTCACGGATaGGCCTCTCAGAGAGGTAGGCGCCAATACGATCAA +
Preference number: 6 (lower is better)
Translates to: TRTHIDGDPRHG*ASQRGRRQYDQ
Trigger: TTGATCGTATTGGCGCCTACCTCTCTGAGAGGCTCATCCGTGACGTGGGTCGCCATCGATATGGGTACGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401432.7
ENST00000402191.5
ENST00000403714.8
CDS CCA 72 bp GAGCTGAGAGGGCATAGAAGGTCAGCTTCTCCATGTTaGTCTTCACCAGACCATCCTCGGGATCCTCAGGGA +
Preference number: 6 (lower is better)
Translates to: ELRGHRRSASPC*SSPDHPRDPQG
Trigger: TCCCTGAGGATCCCGAGGATGGTCTGGTGAAGACCAACATGGAGAAGCTGACCTTCTATGCCCTCTCAGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401432.7
ENST00000402191.5
ENST00000403714.8
CDS CCA 72 bp AGCTCCGGTGATAGGACGGGGTGTCCTCCTCGATGTTaGCAAACTTCACAAACGAGTTGGTGCCGAGGATCT +
Preference number: 6 (lower is better)
Translates to: SSGDRTGCPPRC*QTSQTSWCRGS
Trigger: AGATCCTCGGCACCAACTCGTTTGTGAAGTTTGCCAACATCGAGGAGGACACCCCGTCCTATCACCGGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000401432.7
ENST00000402191.5
ENST00000403714.8
CDS CAA 72 bp AGATGGATGAGAACAGGCTTGATGGCGTTTTTGATGTaGCCAAAGGCAGCCCGGCCCAGCAGCTCCCGAAGA +
Preference number: 6 (lower is better)
Translates to: RWMRTGLMAFLM*PKAARPSSSRR
Trigger: TCTTCGGGAGCTGCTGGGCCGGGCTGCCTTTGGCAACATCAAAAACGCCATCAAGCCTGTTCTCATCCATCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264719.5
ENST00000401432.7
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS CAA 72 bp AGGATCTGCAGGTTGGGTTTCTCTGACTCCAGCAGCTaGGCCACCATCTTGAGGAAGCTCTCCACGAAGAGG +
Preference number: 6 (lower is better)
Translates to: RICRLGFSDSSS*ATILRKLSTKR
Trigger: CCTCTTCGTGGAGAGCTTCCTCAAGATGGTGGCCAAGCTGCTGGAGTCAGAGAAACCCAACCTGCAGATCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401432.7
ENST00000402191.5
ENST00000403714.8
CDS CAA 90 bp TGGTTATCCAGATGGATGAGAACAGGCTTGATGGCGTTTTTGATGTaGCCAAAGGCAGCCCGGCCCAGCAGCTCCCGAAGACACCTCTCA +
Preference number: 6 (lower is better)
Translates to: WLSRWMRTGLMAFLM*PKAARPSSSRRHLS
Trigger: TGAGAGGTGTCTTCGGGAGCTGCTGGGCCGGGCTGCCTTTGGCAACATCAAAAACGCCATCAAGCCTGTTCTCATCCATCTGGATAACCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000264719.5
ENST00000401432.7
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS TCA 72 bp GGAGAGAAGGCGGTCCAGGAAGTTGCTAGGCAGGGCTaGCATCATGTTGTTGCACTGGAAACCTGTGGATAC +
Preference number: 6 (lower is better)
Translates to: GEKAVQEVARQG*HHVVALETCGY
Trigger: GTATCCACAGGTTTCCAGTGCAACAACATGATGTCAGCCCTGCCTAGCAACTTCCTGGACCGCCTTCTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264719.5
ENST00000401432.7
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS GCA 72 bp TTGGCAAACTTCACAAACGAGTTGGTGCCGAGGATCTaGAGGTTGGGTTTCTCTGACTCCAGCAGCTTGGCC +
Preference number: 6 (lower is better)
Translates to: LANFTNELVPRI*RLGFSDSSSLA
Trigger: GGCCAAGCTGCTGGAGTCAGAGAAACCCAACCTGCAGATCCTCGGCACCAACTCGTTTGTGAAGTTTGCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401432.7
ENST00000402191.5
ENST00000403714.8
CDS CCA 72 bp GGGCCTCTCCACAAACACATCCTCGGGGAGCATGTATaGAGCCTCTTTCTTCCTGGTCTCTATCACCTGAAC +
Preference number: 6 (lower is better)
Translates to: GPLHKHILGEHV*SLFLPGLYHLN
Trigger: GTTCAGGTGATAGAGACCAGGAAGAAAGAGGCTCCATACATGCTCCCCGAGGATGTGTTTGTGGAGAGGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000264719.5
CDS CAA 72 bp TTATCCAGATGGATGAGAACAGGCTTGATGGCGTTTTaGATGTTGCCAAAGGCAGCCCGGCCCAGCAGCTCC +
Preference number: 6 (lower is better)
Translates to: LSRWMRTGLMAF*MLPKAARPSSS
Trigger: GGAGCTGCTGGGCCGGGCTGCCTTTGGCAACATCAAAAACGCCATCAAGCCTGTTCTCATCCATCTGGATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264719.5
ENST00000401432.7
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS CAA 90 bp AGAAGGCGGTCCAGGAAGTTGCTAGGCAGGGCTGACATCATGTTGTaGCACTGGAAACCTGTGGATACCTGCAGGAGGGATTTTAGCAGC +
Preference number: 6 (lower is better)
Translates to: RRRSRKLLGRADIML*HWKPVDTCRRDFSS
Trigger: GCTGCTAAAATCCCTCCTGCAGGTATCCACAGGTTTCCAGTGCAACAACATGATGTCAGCCCTGCCTAGCAACTTCCTGGACCGCCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264719.5
ENST00000401432.7
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS CAA 72 bp TCCAGGAAGTTGCTAGGCAGGGCTGACATCATGTTGTaGCACTGGAAACCTGTGGATACCTGCAGGAGGGAT +
Preference number: 6 (lower is better)
Translates to: SRKLLGRADIML*HWKPVDTCRRD
Trigger: ATCCCTCCTGCAGGTATCCACAGGTTTCCAGTGCAACAACATGATGTCAGCCCTGCCTAGCAACTTCCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264719.5
ENST00000401432.7
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS CAA 90 bp TGCTGGGAGTGCTTCTTCATGAAGACGGTGTCCTGTCGAGAGCACTaGTCCACTTTCAGCTTCAGGACAGAGATGTCACTGAGGGTACTG +
Preference number: 6 (lower is better)
Translates to: CWECFFMKTVSCREH*STFSFRTEMSLRVL
Trigger: CAGTACCCTCAGTGACATCTCTGTCCTGAAGCTGAAAGTGGACAAGTGCTCTCGACAGGACACCGTCTTCATGAAGAAGCACTCCCAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264719.5
ENST00000401432.7
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS CAA 90 bp ATGTTGGCAAACTTCACAAACGAGTTGGTGCCGAGGATCTGCAGGTaGGGTTTCTCTGACTCCAGCAGCTTGGCCACCATCTTGAGGAAG +
Preference number: 6 (lower is better)
Translates to: MLANFTNELVPRICR*GFSDSSSLATILRK
Trigger: CTTCCTCAAGATGGTGGCCAAGCTGCTGGAGTCAGAGAAACCCAACCTGCAGATCCTCGGCACCAACTCGTTTGTGAAGTTTGCCAACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000401432.7
ENST00000402191.5
ENST00000403714.8
CDS CCA 72 bp GACTGTTCCTCGATTCTACCTCCACCTGCAGGGAGATaGTCTCTCCAATGCTCCTCCTCTTGGATAAACGAT +
Preference number: 6 (lower is better)
Translates to: DCSSILPPPAGR*SLQCSSSWIND
Trigger: ATCGTTTATCCAAGAGGAGGAGCATTGGAGAGACCATCTCCCTGCAGGTGGAGGTAGAATCGAGGAACAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264719.5
ENST00000401432.7
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS CAA 72 bp GCAAGCCATAGAGCGCCTCGTAGTGTTTCTGCACGTTaGTTTCCTCCTTGCAGCTCAGGTAGATGTGTCTGT +
Preference number: 6 (lower is better)
Translates to: ASHRAPRSVSAR*FPPCSSGRCVC
Trigger: ACAGACACATCTACCTGAGCTGCAAGGAGGAAACAAACGTGCAGAAACACTACGAGGCGCTCTATGGCTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264719.5
ENST00000401432.7
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS CCA 72 bp AAGTTGCTAGGCAGGGCTGACATCATGTTGTTGCACTaGAAACCTGTGGATACCTGCAGGAGGGATTTTAGC +
Preference number: 6 (lower is better)
Translates to: KLLGRADIMLLH*KPVDTCRRDFS
Trigger: GCTAAAATCCCTCCTGCAGGTATCCACAGGTTTCCAGTGCAACAACATGATGTCAGCCCTGCCTAGCAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264719.5
ENST00000401432.7
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS CAA 72 bp TGCTTCTTCATGAAGACGGTGTCCTGTCGAGAGCACTaGTCCACTTTCAGCTTCAGGACAGAGATGTCACTG +
Preference number: 6 (lower is better)
Translates to: CFFMKTVSCREH*STFSFRTEMSL
Trigger: CAGTGACATCTCTGTCCTGAAGCTGAAAGTGGACAAGTGCTCTCGACAGGACACCGTCTTCATGAAGAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264719.5
ENST00000401432.7
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS CAA 72 bp TCATTCACCGTCTTCCTCACCACCCCTTGCAGGCCTTaGATGCCTGACATTCGAATTTTGGTCTTGATTTCT +
Preference number: 6 (lower is better)
Translates to: SFTVFLTTPCRP*MPDIRILVLIS
Trigger: AGAAATCAAGACCAAAATTCGAATGTCAGGCATCAAAGGCCTGCAAGGGGTGGTGAGGAAGACGGTGAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264719.5
ENST00000401432.7
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS TCA 72 bp TTTCTAAGTCATCATGGCTCGAGTGGCACATTTCACTaGATCGGGACACAAAGAAGTCATAGCTCCGGTGAT +
Preference number: 6 (lower is better)
Translates to: FLSHHGSSGTFH*IGTQRSHSSGD
Trigger: ATCACCGGAGCTATGACTTCTTTGTGTCCCGATTCAGTGAAATGTGCCACTCGAGCCATGATGACTTAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264719.5
ENST00000401432.7
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS CAA 72 bp GCCTGGGACTCCACTCACTGTTCTTTCCCATCCCACTaGATCAGGAAAACACATTTCAGATATGGTTGTAGT +
Preference number: 6 (lower is better)
Translates to: AWDSTHCSFPSH*IRKTHFRYGCS
Trigger: ACTACAACCATATCTGAAATGTGTTTTCCTGATCAAGTGGGATGGGAAAGAACAGTGAGTGGAGTCCCAGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000405108.5
CDS CCA 72 bp ATTTTGGTCTTGATTTCTAAGTCATCATGGCTCGAGTaGCACATTTCACTGAATCGGGACACAAAGAAGTCA +
Preference number: 6 (lower is better)
Translates to: ILVLISKSSWLE*HISLNRDTKKS
Trigger: TGACTTCTTTGTGTCCCGATTCAGTGAAATGTGCCACTCGAGCCATGATGACTTAGAAATCAAGACCAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264719.5
ENST00000401432.7
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5
CDS CAA 72 bp TACATGATGATTTTAAAGCAACGGATGGCAAACACCTaGGGTTCCCAAAGAGAATGGTTATCCAGATGGATG +
Preference number: 6 (lower is better)
Translates to: YMMILKQRMANT*GSQREWLSRWM
Trigger: CATCCATCTGGATAACCATTCTCTTTGGGAACCCAAGGTGTTTGCCATCCGTTGCTTTAAAATCATCATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264719.5
ENST00000401432.7
ENST00000402191.5
ENST00000403714.8
ENST00000405108.5