RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EFNB1 (Homo sapiens)

Ensembl gene IDs: ENSG00000090776

Ensembl transcript IDs: ENST00000204961.5

Found 207 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCGCACTCAAGTGGCAGTCTGTTAGCAGCCGTGCTGGCAAGGAACTaGGGTCAAAGTGCACAGCGGGCTGGCCCAGCCCCAGGCAGCCTC +
Preference number: 1 (lower is better)
Translates to: AHSSGSLLAAVLARN*GQSAQRAGPAPGSL
Trigger: GAGGCTGCCTGGGGCTGGGCCAGCCCGCTGTGCACTTTGACCCCAGTTCCTTGCCAGCACGGCTGCTAACAGACTGCCACTTGAGTGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000204961.5
3UTR GCA 90 bp GATGGTGTGAGGGCCAGCTCCTTCCATGGCTGCTCTGGGAGTGCCTaGAAGGCGCACTCAAGTGGCAGTCTGTTAGCAGCCGTGCTGGCA +
Preference number: 1 (lower is better)
Translates to: DGVRASSFHGCSGSA*KAHSSGSLLAAVLA
Trigger: TGCCAGCACGGCTGCTAACAGACTGCCACTTGAGTGCGCCTTGCAGGCACTCCCAGAGCAGCCATGGAAGGAGCTGGCCCTCACACCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000204961.5
3UTR CCA 90 bp CCCCATTGCCAGGATAAGCCTCGTAGGAGGGTCAGGAGGGGAGGGTaGGACACCTTGCCCAGTGGCACTTTCCTCTTCCCTCATGGGCGT +
Preference number: 1 (lower is better)
Translates to: PHCQDKPRRRVRRGG*DTLPSGTFLFPHGR
Trigger: ACGCCCATGAGGGAAGAGGAAAGTGCCACTGGGCAAGGTGTCCCACCCTCCCCTCCTGACCCTCCTACGAGGCTTATCCTGGCAATGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000204961.5
3UTR GCA 90 bp AGGATAAGCCTCGTAGGAGGGTCAGGAGGGGAGGGTGGGACACCTTaGCCAGTGGCACTTTCCTCTTCCCTCATGGGCGTGAACAGCCCT +
Preference number: 1 (lower is better)
Translates to: RISLVGGSGGEGGTP*PVALSSSLMGVNSP
Trigger: AGGGCTGTTCACGCCCATGAGGGAAGAGGAAAGTGCCACTGGGCAAGGTGTCCCACCCTCCCCTCCTGACCCTCCTACGAGGCTTATCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000204961.5
3UTR CCA 90 bp TGTGGAGGTGGATGGTGTGAGGGCCAGCTCCTTCCATGGCTGCTCTaGGAGTGCCTGCAAGGCGCACTCAAGTGGCAGTCTGTTAGCAGC +
Preference number: 1 (lower is better)
Translates to: CGGGWCEGQLLPWLL*ECLQGALKWQSVSS
Trigger: GCTGCTAACAGACTGCCACTTGAGTGCGCCTTGCAGGCACTCCCAGAGCAGCCATGGAAGGAGCTGGCCCTCACACCATCCACCTCCACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000204961.5
3UTR TCA 90 bp GTGGGACACCTTGCCCAGTGGCACTTTCCTCTTCCCTCATGGGCGTaGACAGCCCTGGCCTGCCCCTTACCCCACCAGAAATACCAAGGA +
Preference number: 1 (lower is better)
Translates to: VGHLAQWHFPLPSWA*TALACPLPHQKYQG
Trigger: TCCTTGGTATTTCTGGTGGGGTAAGGGGCAGGCCAGGGCTGTTCACGCCCATGAGGGAAGAGGAAAGTGCCACTGGGCAAGGTGTCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000204961.5
3UTR CCA 90 bp CTCCTTCCATGGCTGCTCTGGGAGTGCCTGCAAGGCGCACTCAAGTaGCAGTCTGTTAGCAGCCGTGCTGGCAAGGAACTGGGGTCAAAG +
Preference number: 1 (lower is better)
Translates to: LLPWLLWECLQGALK*QSVSSRAGKELGSK
Trigger: CTTTGACCCCAGTTCCTTGCCAGCACGGCTGCTAACAGACTGCCACTTGAGTGCGCCTTGCAGGCACTCCCAGAGCAGCCATGGAAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000204961.5
3UTR GCA 90 bp TCTATAAAAGAAATGGCATCCTATGCTTCCTGGCTGACCACATCGTaGCCCAGGCCCTCTTGTACTGGCTTGGGCCAGGCTCACAAAGCC +
Preference number: 1 (lower is better)
Translates to: SIKEMASYASWLTTS*PRPSCTGLGQAHKA
Trigger: GGCTTTGTGAGCCTGGCCCAAGCCAGTACAAGAGGGCCTGGGGCACGATGTGGTCAGCCAGGAAGCATAGGATGCCATTTCTTTTATAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000204961.5
3UTR CCA 90 bp TTGCCCAGTGGCACTTTCCTCTTCCCTCATGGGCGTGAACAGCCCTaGCCTGCCCCTTACCCCACCAGAAATACCAAGGAATCTATAAAA +
Preference number: 1 (lower is better)
Translates to: LPSGTFLFPHGREQP*PAPYPTRNTKESIK
Trigger: TTTTATAGATTCCTTGGTATTTCTGGTGGGGTAAGGGGCAGGCCAGGGCTGTTCACGCCCATGAGGGAAGAGGAAAGTGCCACTGGGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000204961.5
3UTR CCA 90 bp AGAAATACCAAGGAATCTATAAAAGAAATGGCATCCTATGCTTCCTaGCTGACCACATCGTGCCCCAGGCCCTCTTGTACTGGCTTGGGC +
Preference number: 1 (lower is better)
Translates to: RNTKESIKEMASYAS*LTTSCPRPSCTGLG
Trigger: GCCCAAGCCAGTACAAGAGGGCCTGGGGCACGATGTGGTCAGCCAGGAAGCATAGGATGCCATTTCTTTTATAGATTCCTTGGTATTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000204961.5
3UTR-3UTR TCA 90 bp AGCAGCCGTGCTGGCAAGGAACTGGGGTCAAAGTGCACAGCGGGCTGGCCCAGCCTTCCCTCATGGGCGTaGACAGCCCTGGCCTGCCCC +
Preference number: 2 (lower is better)
Translates to: SSRAGKELGSKCTAGWPSLPSWA*TALACP
Trigger: GGGGCAGGCCAGGGCTGTTCACGCCCATGAGGGAAG...GCTGGGCCAGCCCGCTGTGCACTTTGACCCCAGTTCCTTGCCAGCACGGCTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000204961.5
3UTR-3UTR CCA 90 bp CCTTCCATGGCTGCTCTGGGAGTGCCTGCAAGGCGCACTCAAGTGGCAGTCTGTGGGCGTGAACAGCCCTaGCCTGCCCCTTACCCCACC +
Preference number: 2 (lower is better)
Translates to: PSMAALGVPARRTQVAVCGREQP*PAPYPT
Trigger: GGTGGGGTAAGGGGCAGGCCAGGGCTGTTCACGCCC...ACAGACTGCCACTTGAGTGCGCCTTGCAGGCACTCCCAGAGCAGCCATGGAAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000204961.5
3UTR-3UTR CCA 90 bp AGCCGTGCTGGCAAGGAACTGGGGTCAAAGTGCACAGCGGGCTGGCCCAGCCCCGAAGGCACAAGAGCATaGGGGTTAGGGGCACAAGCA +
Preference number: 2 (lower is better)
Translates to: SRAGKELGSKCTAGWPSPEGTRA*GLGAQA
Trigger: TGCTTGTGCCCCTAACCCCCATGCTCTTGTGCCTTC...GGGGCTGGGCCAGCCCGCTGTGCACTTTGACCCCAGTTCCTTGCCAGCACGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000204961.5
3UTR CAA 90 bp CAGGATAAGCCTCGTAGGAGGGTCAGGAGGGGAGGGTGGGACACCTaGCCCAGTGGCACTTTCCTCTTCCCTCATGGGCGTGAACAGCCC +
Preference number: 2 (lower is better)
Translates to: QDKPRRRVRRGGWDT*PSGTFLFPHGREQP
Trigger: GGGCTGTTCACGCCCATGAGGGAAGAGGAAAGTGCCACTGGGCAAGGTGTCCCACCCTCCCCTCCTGACCCTCCTACGAGGCTTATCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000204961.5
3UTR-3UTR CCA 90 bp TGGGTTGGGTGGGGGTTACCCACCTGTGCTAGGGCCCAGAAAAGGAGCAGGCCAGGGCAAATAGCCACCTaGGCACCTCACCTCCCTCCA +
Preference number: 2 (lower is better)
Translates to: WVGWGLPTCARAQKRSRPGQIAT*APHLPP
Trigger: TGGAGGGAGGTGAGGTGCCCAGGTGGCTATTTGCCC...TGGCCTGCTCCTTTTCTGGGCCCTAGCACAGGTGGGTAACCCCCACCCAACCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000204961.5
3UTR-3UTR GCA 90 bp TGGGTTGGGTGGGGGTTACCCACCTGTGCTAGGGCCCAGAAAAGGAGCAGGCCATGGCTGACCACATCGTaGCCCAGGCCCTCTTGTACT +
Preference number: 2 (lower is better)
Translates to: WVGWGLPTCARAQKRSRPWLTTS*PRPSCT
Trigger: AGTACAAGAGGGCCTGGGGCACGATGTGGTCAGCCA...TGGCCTGCTCCTTTTCTGGGCCCTAGCACAGGTGGGTAACCCCCACCCAACCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000204961.5
3UTR-3UTR GCA 90 bp AAGGAGCAGGCCACCTGGTCTTATACCCGCTTAGGTCTCCACCCTGGGCCTCTGAGGGGACTGTCTCCCTaGCTGCTGTCCATCAGTGTC +
Preference number: 2 (lower is better)
Translates to: KEQATWSYTRLGLHPGPLRGLSP*LLSISV
Trigger: GACACTGATGGACAGCAGGCAGGGAGACAGTCCCCT...CAGAGGCCCAGGGTGGAGACCTAAGCGGGTATAAGACCAGGTGGCCTGCTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000204961.5
3UTR-3UTR GCA 90 bp TGGGTTGGGTGGGGGTTACCCACCTGTGCTAGGGCCCAGAAAAGGAGCAGGCCAATGAGGTCATCTGCCTaGAGCAGCTCTCCTGTTCCC +
Preference number: 2 (lower is better)
Translates to: WVGWGLPTCARAQKRSRPMRSSA*SSSPVP
Trigger: GGGAACAGGAGAGCTGCTGCAGGCAGATGACCTCAT...TGGCCTGCTCCTTTTCTGGGCCCTAGCACAGGTGGGTAACCCCCACCCAACCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000204961.5
3UTR-3UTR CAA 90 bp AGCAGCCGTGCTGGCAAGGAACTGGGGTCAAAGTGCACAGCGGGCTGGCCCAGCCCCTCTTGTACTGGCTaGGGCCAGGCTCACAAAGCC +
Preference number: 3 (lower is better)
Translates to: SSRAGKELGSKCTAGWPSPSCTG*GQAHKA
Trigger: GGCTTTGTGAGCCTGGCCCAAGCCAGTACAAGAGGG...GCTGGGCCAGCCCGCTGTGCACTTTGACCCCAGTTCCTTGCCAGCACGGCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000204961.5
3UTR GCA 72 bp GAGGTGGATGGTGTGAGGGCCAGCTCCTTCCATGGCTaGTCTGGGAGTGCCTGCAAGGCGCACTCAAGTGGC +
Preference number: 3 (lower is better)
Translates to: EVDGVRASSFHG*SGSACKAHSSG
Trigger: GCCACTTGAGTGCGCCTTGCAGGCACTCCCAGAGCAGCCATGGAAGGAGCTGGCCCTCACACCATCCACCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000204961.5
3UTR CCA 72 bp AGTGGCAGTCTGTTAGCAGCCGTGCTGGCAAGGAACTaGGGTCAAAGTGCACAGCGGGCTGGCCCAGCCCCA +
Preference number: 3 (lower is better)
Translates to: SGSLLAAVLARN*GQSAQRAGPAP
Trigger: TGGGGCTGGGCCAGCCCGCTGTGCACTTTGACCCCAGTTCCTTGCCAGCACGGCTGCTAACAGACTGCCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000204961.5
3UTR CCA 72 bp TGGCTGCTCTGGGAGTGCCTGCAAGGCGCACTCAAGTaGCAGTCTGTTAGCAGCCGTGCTGGCAAGGAACTG +
Preference number: 3 (lower is better)
Translates to: WLLWECLQGALK*QSVSSRAGKEL
Trigger: CAGTTCCTTGCCAGCACGGCTGCTAACAGACTGCCACTTGAGTGCGCCTTGCAGGCACTCCCAGAGCAGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000204961.5
3UTR CCA 72 bp GGCACTTTCCTCTTCCCTCATGGGCGTGAACAGCCCTaGCCTGCCCCTTACCCCACCAGAAATACCAAGGAA +
Preference number: 3 (lower is better)
Translates to: GTFLFPHGREQP*PAPYPTRNTKE
Trigger: TTCCTTGGTATTTCTGGTGGGGTAAGGGGCAGGCCAGGGCTGTTCACGCCCATGAGGGAAGAGGAAAGTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000204961.5
3UTR TCA 72 bp TGTGTGTGTGTGTGTGTGTGTGTGGAAGGGTGGCAGTaGCTACCCCATTGCCAGGATAAGCCTCGTAGGAGG +
Preference number: 3 (lower is better)
Translates to: CVCVCVCVEGWQ*LPHCQDKPRRR
Trigger: CCTCCTACGAGGCTTATCCTGGCAATGGGGTAGTCACTGCCACCCTTCCACACACACACACACACACACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000204961.5
3UTR CCA 72 bp AAGGAATCTATAAAAGAAATGGCATCCTATGCTTCCTaGCTGACCACATCGTGCCCCAGGCCCTCTTGTACT +
Preference number: 3 (lower is better)
Translates to: KESIKEMASYAS*LTTSCPRPSCT
Trigger: AGTACAAGAGGGCCTGGGGCACGATGTGGTCAGCCAGGAAGCATAGGATGCCATTTCTTTTATAGATTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR TCA 90 bp GTGTCCAGCCCTGCCTTCCAAGAAGGGGCGCCCCCACGGAGCCCAGAGGCCTGGCGCAGCCGCCGGCCTTaGAGTGCTCCCCTCCCGCCG +
Preference number: 4 (lower is better)
Translates to: VSSPAFQEGAPPRSPEAWRSRRP*SAPLPP
Trigger: CGGCGGGAGGGGAGCACTTCAAGGCCGGCGGCTGCG...CCAGGCCTCTGGGCTCCGTGGGGGCGCCCCTTCTTGGAAGGCAGGGCTGGACAC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR GCA 90 bp TGGGGGCGAAAGGAGAGGTCCGGTCCAGGCCGACTGTCCCTCGGGGGCCTGAGGGAGACGCTTCGGGGCTaGGCGCCCTCTCCCCGACGG +
Preference number: 4 (lower is better)
Translates to: WGRKERSGPGRLSLGGLRETLRG*APSPRR
Trigger: CCGTCGGGGAGAGGGCGCGCAGCCCCGAAGCGTCTC...CCTCAGGCCCCCGAGGGACAGTCGGCCTGGACCGGACCTCTCCTTTCGCCCCCA
73% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR GCA 90 bp GTGTCCAGCCCTGCCTTCCAAGAAGGGGCGCCCCCACGGAGCCCAGAGGCCTGGTCCTGGGCTCTCCGCTaGCGCACGAGGCGCGACGGG +
Preference number: 4 (lower is better)
Translates to: VSSPAFQEGAPPRSPEAWSWALR*RTRRDG
Trigger: CCCGTCGCGCCTCGTGCGGCAGCGGAGAGCCCAGGA...CCAGGCCTCTGGGCTCCGTGGGGGCGCCCCTTCTTGGAAGGCAGGGCTGGACAC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR CCA 90 bp AGGGGGTGTGGGGGCGAAAGGAGAGGTCCGGTCCAGGCCGACTGTCCCTCGGGGCCGACTGGGCCGCCCTaGCACGGGCTCCGTTCCTCC +
Preference number: 4 (lower is better)
Translates to: RGCGGERRGPVQADCPSGPTGPP*HGLRSS
Trigger: GGAGGAACGGAGCCCGTGCCAGGGCGGCCCAGTCGG...CCCCGAGGGACAGTCGGCCTGGACCGGACCTCTCCTTTCGCCCCCACACCCCCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR GCA 90 bp AGGGGGTGTGGGGGCGAAAGGAGAGGTCCGGTCCAGGCCGACTGTCCCTCGGGGCAGGGTCCCCGCTGCTaGCCCCACTTGCACCTGGGC +
Preference number: 4 (lower is better)
Translates to: RGCGGERRGPVQADCPSGQGPRC*PHLHLG
Trigger: GCCCAGGTGCAAGTGGGGGCAGCAGCGGGGACCCTG...CCCCGAGGGACAGTCGGCCTGGACCGGACCTCTCCTTTCGCCCCCACACCCCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR GCA 90 bp GGGGGTGTGGGGGCGAAAGGAGAGGTCCGGTCCAGGCCGACTGTCCCTCGGGGGAGGGCAGCCGCCCGCTaGTGTGTGTGCTTGCGGTGC +
Preference number: 4 (lower is better)
Translates to: GGVGAKGEVRSRPTVPRGRAAAR*CVCLRC
Trigger: GCACCGCAAGCACACACAGCAGCGGGCGGCTGCCCT...CCCCCGAGGGACAGTCGGCCTGGACCGGACCTCTCCTTTCGCCCCCACACCCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR GCA 90 bp AGGGGGTGTGGGGGCGAAAGGAGAGGTCCGGTCCAGGCCGACTGTCCCTCGGGGTGTCGCTGGGCTCGGTaGCCGCTGTGCCACTGCCCC +
Preference number: 4 (lower is better)
Translates to: RGCGGERRGPVQADCPSGCRWAR*PLCHCP
Trigger: GGGGCAGTGGCACAGCGGGCACCGAGCCCAGCGACA...CCCCGAGGGACAGTCGGCCTGGACCGGACCTCTCCTTTCGCCCCCACACCCCCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR CCA 90 bp TGGGGGCGAAAGGAGAGGTCCGGTCCAGGCCGACTGTCCCTCGGGGGCCTGAGGGCCAGGAGGACTCACTaGGCAGCCGCCCCCAACCCG +
Preference number: 4 (lower is better)
Translates to: WGRKERSGPGRLSLGGLRARRTH*AAAPNP
Trigger: CGGGTTGGGGGCGGCTGCCCAGTGAGTCCTCCTGGC...CCTCAGGCCCCCGAGGGACAGTCGGCCTGGACCGGACCTCTCCTTTCGCCCCCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR CCA 90 bp GTGTCCAGCCCTGCCTTCCAAGAAGGGGCGCCCCCACGGAGCCCAGAGGCCTGGTCTTGGCCAGCGGTGTaGCGAGCCGGCACAGCGCCC +
Preference number: 4 (lower is better)
Translates to: VSSPAFQEGAPPRSPEAWSWPAV*RAGTAP
Trigger: GGGCGCTGTGCCGGCTCGCCACACCGCTGGCCAAGA...CCAGGCCTCTGGGCTCCGTGGGGGCGCCCCTTCTTGGAAGGCAGGGCTGGACAC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR TCA 90 bp AGCCGTGCTGGCAAGGAACTGGGGTCAAAGTGCACAGCGGGCTGGCCCAGCCCCCTCTGCGCCCCCGGGTaGTCCCGCCCGATTCCGCTC +
Preference number: 4 (lower is better)
Translates to: SRAGKELGSKCTAGWPSPLCAPG*SRPIPL
Trigger: GAGCGGAATCGGGCGGGATCACCCGGGGGCGCAGAG...GGGGCTGGGCCAGCCCGCTGTGCACTTTGACCCCAGTTCCTTGCCAGCACGGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR TCA 90 bp AGGGGGTGTGGGGGCGAAAGGAGAGGTCCGGTCCAGGCCGACTGTCCCTCGGGGCTTCCCTCATGGGCGTaGACAGCCCTGGCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: RGCGGERRGPVQADCPSGLPSWA*TALACP
Trigger: GGGGCAGGCCAGGGCTGTTCACGCCCATGAGGGAAG...CCCCGAGGGACAGTCGGCCTGGACCGGACCTCTCCTTTCGCCCCCACACCCCCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR GCA 90 bp AGGGGGTGTGGGGGCGAAAGGAGAGGTCCGGTCCAGGCCGACTGTCCCTCGGGGGGGGGCCTGAGGCCGTaGCGGGCACTCAGACCTTGT +
Preference number: 4 (lower is better)
Translates to: RGCGGERRGPVQADCPSGGGLRP*RALRPC
Trigger: ACAAGGTCTGAGTGCCCGGCACGGCCTCAGGCCCCC...CCCCGAGGGACAGTCGGCCTGGACCGGACCTCTCCTTTCGCCCCCACACCCCCT
71% GC, longest homopolymer 9 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR CCA 90 bp AGCCGTGCTGGCAAGGAACTGGGGTCAAAGTGCACAGCGGGCTGGCCCAGCCCCCGCGTCGCCGAGTCCTaGCTCCCGGGCGATCGAGCC +
Preference number: 4 (lower is better)
Translates to: SRAGKELGSKCTAGWPSPRVAES*LPGDRA
Trigger: GGCTCGATCGCCCGGGAGCCAGGACTCGGCGACGCG...GGGGCTGGGCCAGCCCGCTGTGCACTTTGACCCCAGTTCCTTGCCAGCACGGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR CCA 90 bp GTGTCCAGCCCTGCCTTCCAAGAAGGGGCGCCCCCACGGAGCCCAGAGGCCTGGGGGCGTGAACAGCCCTaGCCTGCCCCTTACCCCACC +
Preference number: 4 (lower is better)
Translates to: VSSPAFQEGAPPRSPEAWGREQP*PAPYPT
Trigger: GGTGGGGTAAGGGGCAGGCCAGGGCTGTTCACGCCC...CCAGGCCTCTGGGCTCCGTGGGGGCGCCCCTTCTTGGAAGGCAGGGCTGGACAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR TCA 90 bp AGCCGTGCTGGCAAGGAACTGGGGTCAAAGTGCACAGCGGGCTGGCCCAGCCCCGACTGGCCAGGGTACTaGGCGAGAGGGCAGCCGCCC +
Preference number: 4 (lower is better)
Translates to: SRAGKELGSKCTAGWPSPDWPGY*ARGQPP
Trigger: GGGCGGCTGCCCTCTCGCTCAGTACCCTGGCCAGTC...GGGGCTGGGCCAGCCCGCTGTGCACTTTGACCCCAGTTCCTTGCCAGCACGGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR GCA 90 bp GGGGGTGTGGGGGCGAAAGGAGAGGTCCGGTCCAGGCCGACTGTCCCTCGGGGGAGAGCGGGGAGATGCTaGCGAGCGAGCCAGTCCCAT +
Preference number: 4 (lower is better)
Translates to: GGVGAKGEVRSRPTVPRGRAGRC*RASQSH
Trigger: ATGGGACTGGCTCGCTCGGCAGCATCTCCCCGCTCT...CCCCCGAGGGACAGTCGGCCTGGACCGGACCTCTCCTTTCGCCCCCACACCCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR GCA 90 bp CGTGCTGGCAAGGAACTGGGGTCAAAGTGCACAGCGGGCTGGCCCAGCCCCAGGCCGCCGGCCTTGAAGTaGTCCCCTCCCGCCGGCTTC +
Preference number: 4 (lower is better)
Translates to: RAGKELGSKCTAGWPSPRPPALK*SPPAGF
Trigger: GAAGCCGGCGGGAGGGGAGCACTTCAAGGCCGGCGG...CCTGGGGCTGGGCCAGCCCGCTGTGCACTTTGACCCCAGTTCCTTGCCAGCACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR GCA 90 bp GGGGGTGTGGGGGCGAAAGGAGAGGTCCGGTCCAGGCCGACTGTCCCTCGGGGGTCGCCACAAGCCACTTaGCGAGCCAACGCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: GGVGAKGEVRSRPTVPRGSPQAT*RANAAQ
Trigger: CTGGGCAGCGTTGGCTCGGCAAGTGGCTTGTGGCGA...CCCCCGAGGGACAGTCGGCCTGGACCGGACCTCTCCTTTCGCCCCCACACCCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR GCA 90 bp AGGGGGTGTGGGGGCGAAAGGAGAGGTCCGGTCCAGGCCGACTGTCCCTCGGGGCATCAGGGTCCCCGCTaGTGCCCCCACTTGCACCTG +
Preference number: 4 (lower is better)
Translates to: RGCGGERRGPVQADCPSGHQGPR*CPHLHL
Trigger: CAGGTGCAAGTGGGGGCAGCAGCGGGGACCCTGATG...CCCCGAGGGACAGTCGGCCTGGACCGGACCTCTCCTTTCGCCCCCACACCCCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR CCA 90 bp CGTGCTGGCAAGGAACTGGGGTCAAAGTGCACAGCGGGCTGGCCCAGCCCCAGGTCCTCCGGGCCACACTaGGACTCCGGGCTACGCGCC +
Preference number: 4 (lower is better)
Translates to: RAGKELGSKCTAGWPSPRSSGPH*DSGLRA
Trigger: GGCGCGTAGCCCGGAGTCCCAGTGTGGCCCGGAGGA...CCTGGGGCTGGGCCAGCCCGCTGTGCACTTTGACCCCAGTTCCTTGCCAGCACG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR GCA 90 bp AGCCGTGCTGGCAAGGAACTGGGGTCAAAGTGCACAGCGGGCTGGCCCAGCCCCTCGAGCCCGAGGGTCTaGGGCCAGTGCGAGCCTCAC +
Preference number: 4 (lower is better)
Translates to: SRAGKELGSKCTAGWPSPSSPRV*GQCEPH
Trigger: GTGAGGCTCGCACTGGCCGCAGACCCTCGGGCTCGA...GGGGCTGGGCCAGCCCGCTGTGCACTTTGACCCCAGTTCCTTGCCAGCACGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR GCA 90 bp AGGGGGTGTGGGGGCGAAAGGAGAGGTCCGGTCCAGGCCGACTGTCCCTCGGGGTCTTCATGGTGCGTGTaGGGCACACACCGCCCTCCC +
Preference number: 4 (lower is better)
Translates to: RGCGGERRGPVQADCPSGSSWCV*GTHRPP
Trigger: GGGAGGGCGGTGTGTGCCGCACACGCACCATGAAGA...CCCCGAGGGACAGTCGGCCTGGACCGGACCTCTCCTTTCGCCCCCACACCCCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR CCA 90 bp AGCCGTGCTGGCAAGGAACTGGGGTCAAAGTGCACAGCGGGCTGGCCCAGCCCCGAGGGCTCGTTCTCCTaGGCTCTCCGCTGCCGCACG +
Preference number: 4 (lower is better)
Translates to: SRAGKELGSKCTAGWPSPEGSFS*ALRCRT
Trigger: CGTGCGGCAGCGGAGAGCCCAGGAGAACGAGCCCTC...GGGGCTGGGCCAGCCCGCTGTGCACTTTGACCCCAGTTCCTTGCCAGCACGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR GCA 90 bp GGGGGTGTGGGGGCGAAAGGAGAGGTCCGGTCCAGGCCGACTGTCCCTCGGGGGTGGGGTCGAGAACTGTaGTACAGGCAGCTGCCTGCT +
Preference number: 4 (lower is better)
Translates to: GGVGAKGEVRSRPTVPRGWGREL*YRQLPA
Trigger: AGCAGGCAGCTGCCTGTAGCACAGTTCTCGACCCCA...CCCCCGAGGGACAGTCGGCCTGGACCGGACCTCTCCTTTCGCCCCCACACCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR CCA 90 bp GGGGGTGTGGGGGCGAAAGGAGAGGTCCGGTCCAGGCCGACTGTCCCTCGGGGGCACTTCGGGATCCCTTaGCGCCTCCTCACCAAAGCT +
Preference number: 4 (lower is better)
Translates to: GGVGAKGEVRSRPTVPRGHFGIP*RLLTKA
Trigger: AGCTTTGGTGAGGAGGCGCCAAGGGATCCCGAAGTG...CCCCCGAGGGACAGTCGGCCTGGACCGGACCTCTCCTTTCGCCCCCACACCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR CCA 90 bp AGCAGCCGTGCTGGCAAGGAACTGGGGTCAAAGTGCACAGCGGGCTGGCCCAGCTCTCCCACCTGGCACTaGGGTGGGCAGCTGGCCAGG +
Preference number: 4 (lower is better)
Translates to: SSRAGKELGSKCTAGWPSSPTWH*GGQLAR
Trigger: CCTGGCCAGCTGCCCACCCCAGTGCCAGGTGGGAGA...GCTGGGCCAGCCCGCTGTGCACTTTGACCCCAGTTCCTTGCCAGCACGGCTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR TCA 90 bp AAGGAGCAGGCCACCTGGTCTTATACCCGCTTAGGTCTCCACCCTGGGCCTCTGCCGCAGAGGTCTCGGTaGCCGCCCCGACGCCTCGAC +
Preference number: 4 (lower is better)
Translates to: KEQATWSYTRLGLHPGPLPQRSR*PPRRLD
Trigger: GTCGAGGCGTCGGGGCGGTCACCGAGACCTCTGCGG...CAGAGGCCCAGGGTGGAGACCTAAGCGGGTATAAGACCAGGTGGCCTGCTCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR TCA 90 bp TGGGGGCGAAAGGAGAGGTCCGGTCCAGGCCGACTGTCCCTCGGGGGCCTGAGGCTGGCCTATTGCAGGTaGCCAACACGTTGGGGTCGA +
Preference number: 4 (lower is better)
Translates to: WGRKERSGPGRLSLGGLRLAYCR*PTRWGR
Trigger: TCGACCCCAACGTGTTGGTCACCTGCAATAGGCCAG...CCTCAGGCCCCCGAGGGACAGTCGGCCTGGACCGGACCTCTCCTTTCGCCCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR GCA 90 bp AAGGAGCAGGCCACCTGGTCTTATACCCGCTTAGGTCTCCACCCTGGGCCTCTGCGCCTCGCCTTCCTCTaGCGCGCTGCGCTCGGAGCC +
Preference number: 4 (lower is better)
Translates to: KEQATWSYTRLGLHPGPLRLAFL*RAALGA
Trigger: GGCTCCGAGCGCAGCGCGGCAGAGGAAGGCGAGGCG...CAGAGGCCCAGGGTGGAGACCTAAGCGGGTATAAGACCAGGTGGCCTGCTCCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR GCA 90 bp AGCCGTGCTGGCAAGGAACTGGGGTCAAAGTGCACAGCGGGCTGGCCCAGCCCCTTGCCGAGCCAACGCTaGCCAGGCCGAGCCATCTTC +
Preference number: 4 (lower is better)
Translates to: SRAGKELGSKCTAGWPSPLPSQR*PGRAIF
Trigger: GAAGATGGCTCGGCCTGGGCAGCGTTGGCTCGGCAA...GGGGCTGGGCCAGCCCGCTGTGCACTTTGACCCCAGTTCCTTGCCAGCACGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR GCA 90 bp AGCCGTGCTGGCAAGGAACTGGGGTCAAAGTGCACAGCGGGCTGGCCCAGCCCCTGTGCTACAGGCAGCTaGCTGCTCAGGCCGCACCAG +
Preference number: 4 (lower is better)
Translates to: SRAGKELGSKCTAGWPSPCATGS*LLRPHQ
Trigger: CTGGTGCGGCCTGAGCAGGCAGCTGCCTGTAGCACA...GGGGCTGGGCCAGCCCGCTGTGCACTTTGACCCCAGTTCCTTGCCAGCACGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR GCA 90 bp AGCAGCCGTGCTGGCAAGGAACTGGGGTCAAAGTGCACAGCGGGCTGGCCCAGCGCCCGCTGCTGTGTGTaGTTGCGGTGCCGCTTGCGT +
Preference number: 4 (lower is better)
Translates to: SSRAGKELGSKCTAGWPSARCCV*LRCRLR
Trigger: ACGCAAGCGGCACCGCAAGCACACACAGCAGCGGGC...GCTGGGCCAGCCCGCTGTGCACTTTGACCCCAGTTCCTTGCCAGCACGGCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR GCA 90 bp AGGGGGTGTGGGGGCGAAAGGAGAGGTCCGGTCCAGGCCGACTGTCCCTCGGGGAGGGGACTGTCTCCCTaGCTGCTGTCCATCAGTGTC +
Preference number: 4 (lower is better)
Translates to: RGCGGERRGPVQADCPSGRGLSP*LLSISV
Trigger: GACACTGATGGACAGCAGGCAGGGAGACAGTCCCCT...CCCCGAGGGACAGTCGGCCTGGACCGGACCTCTCCTTTCGCCCCCACACCCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR GCA 90 bp AGGGGGTGTGGGGGCGAAAGGAGAGGTCCGGTCCAGGCCGACTGTCCCTCGGGGAAAAACCCTTCCGACTaGCACCTGGAAGGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: RGCGGERRGPVQADCPSGKNPSD*HLEGAG
Trigger: GCCAGCCCCTTCCAGGTGGCAGTCGGAAGGGTTTTT...CCCCGAGGGACAGTCGGCCTGGACCGGACCTCTCCTTTCGCCCCCACACCCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR CCA 90 bp AGCAGCCGTGCTGGCAAGGAACTGGGGTCAAAGTGCACAGCGGGCTGGCCCAGCGTCAGGAGGGGAGGGTaGGACACCTTGCCCAGTGGC +
Preference number: 4 (lower is better)
Translates to: SSRAGKELGSKCTAGWPSVRRGG*DTLPSG
Trigger: GCCACTGGGCAAGGTGTCCCACCCTCCCCTCCTGAC...GCTGGGCCAGCCCGCTGTGCACTTTGACCCCAGTTCCTTGCCAGCACGGCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR CCA 90 bp AGCCGTGCTGGCAAGGAACTGGGGTCAAAGTGCACAGCGGGCTGGCCCAGCCCCCCACCTGGAAGGGGCTaGCTGTTCTGCTCCCTCTCC +
Preference number: 4 (lower is better)
Translates to: SRAGKELGSKCTAGWPSPPPGRG*LFCSLS
Trigger: GGAGAGGGAGCAGAACAGCCAGCCCCTTCCAGGTGG...GGGGCTGGGCCAGCCCGCTGTGCACTTTGACCCCAGTTCCTTGCCAGCACGGCT
67% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR GCA 90 bp TGGGGGCGAAAGGAGAGGTCCGGTCCAGGCCGACTGTCCCTCGGGGGCCTGAGGCTGCTGGTAGTCAGCTaGTCAGGCGTCACAGCATTG +
Preference number: 4 (lower is better)
Translates to: WGRKERSGPGRLSLGGLRLLVVS*SGVTAL
Trigger: CAATGCTGTGACGCCTGAGCAGCTGACTACCAGCAG...CCTCAGGCCCCCGAGGGACAGTCGGCCTGGACCGGACCTCTCCTTTCGCCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR CCA 90 bp GTGTCCAGCCCTGCCTTCCAAGAAGGGGCGCCCCCACGGAGCCCAGAGGCCTGGCAAGGCGCACTCAAGTaGCAGTCTGTTAGCAGCCGT +
Preference number: 4 (lower is better)
Translates to: VSSPAFQEGAPPRSPEAWQGALK*QSVSSR
Trigger: ACGGCTGCTAACAGACTGCCACTTGAGTGCGCCTTG...CCAGGCCTCTGGGCTCCGTGGGGGCGCCCCTTCTTGGAAGGCAGGGCTGGACAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR CCA 90 bp AGCAGCCGTGCTGGCAAGGAACTGGGGTCAAAGTGCACAGCGGGCTGGCCCAGCGGCCAGCTCCTTCCATaGCTGCTCTGGGAGTGCCTG +
Preference number: 4 (lower is better)
Translates to: SSRAGKELGSKCTAGWPSGQLLP*LLWECL
Trigger: CAGGCACTCCCAGAGCAGCCATGGAAGGAGCTGGCC...GCTGGGCCAGCCCGCTGTGCACTTTGACCCCAGTTCCTTGCCAGCACGGCTGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR TCA 90 bp CGTGCTGGCAAGGAACTGGGGTCAAAGTGCACAGCGGGCTGGCCCAGCCCCAGGGTGGAAGGGTGGCAGTaGCTACCCCATTGCCAGGAT +
Preference number: 4 (lower is better)
Translates to: RAGKELGSKCTAGWPSPRVEGWQ*LPHCQD
Trigger: ATCCTGGCAATGGGGTAGTCACTGCCACCCTTCCAC...CCTGGGGCTGGGCCAGCCCGCTGTGCACTTTGACCCCAGTTCCTTGCCAGCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR GCA 90 bp AAGGAGCAGGCCACCTGGTCTTATACCCGCTTAGGTCTCCACCCTGGGCCTCTGTGCCCGCTGTGCCACTaGCCCCCTTGGGACTGGCCA +
Preference number: 4 (lower is better)
Translates to: KEQATWSYTRLGLHPGPLCPLCH*PPWDWP
Trigger: TGGCCAGTCCCAAGGGGGGCAGTGGCACAGCGGGCA...CAGAGGCCCAGGGTGGAGACCTAAGCGGGTATAAGACCAGGTGGCCTGCTCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR GCA 90 bp AGCCGTGCTGGCAAGGAACTGGGGTCAAAGTGCACAGCGGGCTGGCCCAGCCCCTGGCTGACCACATCGTaGCCCAGGCCCTCTTGTACT +
Preference number: 4 (lower is better)
Translates to: SRAGKELGSKCTAGWPSPWLTTS*PRPSCT
Trigger: AGTACAAGAGGGCCTGGGGCACGATGTGGTCAGCCA...GGGGCTGGGCCAGCCCGCTGTGCACTTTGACCCCAGTTCCTTGCCAGCACGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR CCA 90 bp AGCCGTGCTGGCAAGGAACTGGGGTCAAAGTGCACAGCGGGCTGGCCCAGCCCCGGGATCGCTGTCCCTTaGAAGAAGTGGGGGTTTCCC +
Preference number: 4 (lower is better)
Translates to: SRAGKELGSKCTAGWPSPGIAVP*KKWGFP
Trigger: GGGAAACCCCCACTTCTTCCAAGGGACAGCGATCCC...GGGGCTGGGCCAGCCCGCTGTGCACTTTGACCCCAGTTCCTTGCCAGCACGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR CCA 90 bp AGGGGGTGTGGGGGCGAAAGGAGAGGTCCGGTCCAGGCCGACTGTCCCTCGGGGGTGTGTGTGTGTGTGTaGAAGGGTGGCAGTGACTAC +
Preference number: 4 (lower is better)
Translates to: RGCGGERRGPVQADCPSGVCVCV*KGGSDY
Trigger: GTAGTCACTGCCACCCTTCCACACACACACACACAC...CCCCGAGGGACAGTCGGCCTGGACCGGACCTCTCCTTTCGCCCCCACACCCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR TCA 90 bp AGCCGTGCTGGCAAGGAACTGGGGTCAAAGTGCACAGCGGGCTGGCCCAGCCCCCCTGTGTGGCCATCTTaGCAGTGTTGTCTGCCTCCT +
Preference number: 4 (lower is better)
Translates to: SRAGKELGSKCTAGWPSPPVWPS*QCCLPP
Trigger: AGGAGGCAGACAACACTGTCAAGATGGCCACACAGG...GGGGCTGGGCCAGCCCGCTGTGCACTTTGACCCCAGTTCCTTGCCAGCACGGCT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR GCA 90 bp TGGGTTGGGTGGGGGTTACCCACCTGTGCTAGGGCCCAGAAAAGGAGCAGGCCAAGAAGAGCGGGGAGATaGTGCCGAGCGAGCCAGTCC +
Preference number: 4 (lower is better)
Translates to: WVGWGLPTCARAQKRSRPRRAGR*CRASQS
Trigger: GGACTGGCTCGCTCGGCAGCATCTCCCCGCTCTTCT...TGGCCTGCTCCTTTTCTGGGCCCTAGCACAGGTGGGTAACCCCCACCCAACCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR GCA 90 bp CCTTCCATGGCTGCTCTGGGAGTGCCTGCAAGGCGCACTCAAGTGGCAGTCTGTGGGCCGCCCTGCTTCTaGTCGGGGGCAGATGATGTC +
Preference number: 4 (lower is better)
Translates to: PSMAALGVPARRTQVAVCGPPCF*SGADDV
Trigger: GACATCATCTGCCCCCGAGCAGAAGCAGGGCGGCCC...ACAGACTGCCACTTGAGTGCGCCTTGCAGGCACTCCCAGAGCAGCCATGGAAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR GCA 90 bp AGGGGGTGTGGGGGCGAAAGGAGAGGTCCGGTCCAGGCCGACTGTCCCTCGGGGTGGTTCACAGTCTCATaGTTGCCATCAGAGTCACCC +
Preference number: 4 (lower is better)
Translates to: RGCGGERRGPVQADCPSGWFTVS*LPSESP
Trigger: GGGTGACTCTGATGGCAAGCATGAGACTGTGAACCA...CCCCGAGGGACAGTCGGCCTGGACCGGACCTCTCCTTTCGCCCCCACACCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR GCA 90 bp AGCCGTGCTGGCAAGGAACTGGGGTCAAAGTGCACAGCGGGCTGGCCCAGCCCCTGTGTGTGCTTGCGGTaGCGCTTGCGTAGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: SRAGKELGSKCTAGWPSPCVCLR*RLRSFS
Trigger: ACTGAAGCTACGCAAGCGGCACCGCAAGCACACACA...GGGGCTGGGCCAGCCCGCTGTGCACTTTGACCCCAGTTCCTTGCCAGCACGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR CCA 90 bp CGTGCTGGCAAGGAACTGGGGTCAAAGTGCACAGCGGGCTGGCCCAGCCCCAGGGAAGGCACAAGAGCATaGGGGTTAGGGGCACAAGCA +
Preference number: 4 (lower is better)
Translates to: RAGKELGSKCTAGWPSPREGTRA*GLGAQA
Trigger: TGCTTGTGCCCCTAACCCCCATGCTCTTGTGCCTTC...CCTGGGGCTGGGCCAGCCCGCTGTGCACTTTGACCCCAGTTCCTTGCCAGCACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR CCA 90 bp AGCAGCCGTGCTGGCAAGGAACTGGGGTCAAAGTGCACAGCGGGCTGGCCCAGCGTGCTGGCAAGGAACTaGGGTCAAAGTGCACAGCGG +
Preference number: 4 (lower is better)
Translates to: SSRAGKELGSKCTAGWPSVLARN*GQSAQR
Trigger: CCGCTGTGCACTTTGACCCCAGTTCCTTGCCAGCAC...GCTGGGCCAGCCCGCTGTGCACTTTGACCCCAGTTCCTTGCCAGCACGGCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR TCA 90 bp AAGGAGCAGGCCACCTGGTCTTATACCCGCTTAGGTCTCCACCCTGGGCCTCTGCCTATGCTTCCTGGCTaGCCACATCGTGCCCCAGGC +
Preference number: 4 (lower is better)
Translates to: KEQATWSYTRLGLHPGPLPMLPG*PHRAPG
Trigger: GCCTGGGGCACGATGTGGTCAGCCAGGAAGCATAGG...CAGAGGCCCAGGGTGGAGACCTAAGCGGGTATAAGACCAGGTGGCCTGCTCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR GCA 90 bp GTGTCCAGCCCTGCCTTCCAAGAAGGGGCGCCCCCACGGAGCCCAGAGGCCTGGGTAAAGCGTATTTCCTaGTCTGGCCTATTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: VSSPAFQEGAPPRSPEAWVKRIS*SGLLQV
Trigger: CACCTGCAATAGGCCAGAGCAGGAAATACGCTTTAC...CCAGGCCTCTGGGCTCCGTGGGGGCGCCCCTTCTTGGAAGGCAGGGCTGGACAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR GCA 90 bp CCTTCCATGGCTGCTCTGGGAGTGCCTGCAAGGCGCACTCAAGTGGCAGTCTGTGAACTGGGGTCAAAGTaGACAGCGGGCTGGCCCAGC +
Preference number: 4 (lower is better)
Translates to: PSMAALGVPARRTQVAVCELGSK*TAGWPS
Trigger: GCTGGGCCAGCCCGCTGTGCACTTTGACCCCAGTTC...ACAGACTGCCACTTGAGTGCGCCTTGCAGGCACTCCCAGAGCAGCCATGGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR GCA 90 bp TGGGTTGGGTGGGGGTTACCCACCTGTGCTAGGGCCCAGAAAAGGAGCAGGCCATGGCTGCTCTGGGAGTaGCTGCAAGGCGCACTCAAG +
Preference number: 4 (lower is better)
Translates to: WVGWGLPTCARAQKRSRPWLLWE*LQGALK
Trigger: CTTGAGTGCGCCTTGCAGGCACTCCCAGAGCAGCCA...TGGCCTGCTCCTTTTCTGGGCCCTAGCACAGGTGGGTAACCCCCACCCAACCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR TCA 90 bp AAGGAGCAGGCCACCTGGTCTTATACCCGCTTAGGTCTCCACCCTGGGCCTCTGTGGAGGTGGATGGTGTaGGGGCCAGCTCCTTCCATG +
Preference number: 4 (lower is better)
Translates to: KEQATWSYTRLGLHPGPLWRWMV*GPAPSM
Trigger: CATGGAAGGAGCTGGCCCTCACACCATCCACCTCCA...CAGAGGCCCAGGGTGGAGACCTAAGCGGGTATAAGACCAGGTGGCCTGCTCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR GCA 90 bp AAGGAGCAGGCCACCTGGTCTTATACCCGCTTAGGTCTCCACCCTGGGCCTCTGGCTGCTGTGTGTGCTTaGGGTGCCGCTTGCGTAGCT +
Preference number: 4 (lower is better)
Translates to: KEQATWSYTRLGLHPGPLAAVCA*GAACVA
Trigger: AGCTACGCAAGCGGCACCGCAAGCACACACAGCAGC...CAGAGGCCCAGGGTGGAGACCTAAGCGGGTATAAGACCAGGTGGCCTGCTCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR GCA 90 bp CCTTCCATGGCTGCTCTGGGAGTGCCTGCAAGGCGCACTCAAGTGGCAGTCTGTTGCTCTGGGAGTGCCTaGAAGGCGCACTCAAGTGGC +
Preference number: 4 (lower is better)
Translates to: PSMAALGVPARRTQVAVCCSGSA*KAHSSG
Trigger: GCCACTTGAGTGCGCCTTGCAGGCACTCCCAGAGCA...ACAGACTGCCACTTGAGTGCGCCTTGCAGGCACTCCCAGAGCAGCCATGGAAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR CCA 90 bp AGCCGTGCTGGCAAGGAACTGGGGTCAAAGTGCACAGCGGGCTGGCCCAGCCCCGCGTATTTCCTGCTCTaGCCTATTGCAGGTGACCAA +
Preference number: 4 (lower is better)
Translates to: SRAGKELGSKCTAGWPSPAYFLL*PIAGDQ
Trigger: TTGGTCACCTGCAATAGGCCAGAGCAGGAAATACGC...GGGGCTGGGCCAGCCCGCTGTGCACTTTGACCCCAGTTCCTTGCCAGCACGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR CCA 90 bp AGCAGCCGTGCTGGCAAGGAACTGGGGTCAAAGTGCACAGCGGGCTGGCCCAGCCAGGCGTCACAGCATTaGGATCTTGCCCAACCTTCA +
Preference number: 4 (lower is better)
Translates to: SSRAGKELGSKCTAGWPSQASQH*DLAQPS
Trigger: TGAAGGTTGGGCAAGATCCCAATGCTGTGACGCCTG...GCTGGGCCAGCCCGCTGTGCACTTTGACCCCAGTTCCTTGCCAGCACGGCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR CCA 90 bp AAGGAGCAGGCCACCTGGTCTTATACCCGCTTAGGTCTCCACCCTGGGCCTCTGGGGCAAATAGCCACCTaGGCACCTCACCTCCCTCCA +
Preference number: 4 (lower is better)
Translates to: KEQATWSYTRLGLHPGPLGQIAT*APHLPP
Trigger: TGGAGGGAGGTGAGGTGCCCAGGTGGCTATTTGCCC...CAGAGGCCCAGGGTGGAGACCTAAGCGGGTATAAGACCAGGTGGCCTGCTCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR TCA 90 bp CCTTCCATGGCTGCTCTGGGAGTGCCTGCAAGGCGCACTCAAGTGGCAGTCTGTCTGCTCGGGGGCAGATaGTGTCCAGCTTGTCTCCAA +
Preference number: 4 (lower is better)
Translates to: PSMAALGVPARRTQVAVCLLGGR*CPACLQ
Trigger: TTGGAGACAAGCTGGACATCATCTGCCCCCGAGCAG...ACAGACTGCCACTTGAGTGCGCCTTGCAGGCACTCCCAGAGCAGCCATGGAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR GCA 90 bp CCTTCCATGGCTGCTCTGGGAGTGCCTGCAAGGCGCACTCAAGTGGCAGTCTGTGACTGTCTCCCTGCCTaGTGTCCATCAGTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: PSMAALGVPARRTQVAVCDCLPA*CPSVSS
Trigger: GCTGGACACTGATGGACAGCAGGCAGGGAGACAGTC...ACAGACTGCCACTTGAGTGCGCCTTGCAGGCACTCCCAGAGCAGCCATGGAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR CCA 90 bp TGGGTTGGGTGGGGGTTACCCACCTGTGCTAGGGCCCAGAAAAGGAGCAGGCCACCTCTTGTACTGGCTTaGGCCAGGCTCACAAAGCCT +
Preference number: 4 (lower is better)
Translates to: WVGWGLPTCARAQKRSRPPLVLA*ARLTKP
Trigger: AGGCTTTGTGAGCCTGGCCCAAGCCAGTACAAGAGG...TGGCCTGCTCCTTTTCTGGGCCCTAGCACAGGTGGGTAACCCCCACCCAACCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR GCA 90 bp CCTTCCATGGCTGCTCTGGGAGTGCCTGCAAGGCGCACTCAAGTGGCAGTCTGTCTTCAGCGCGGGCCCTaGTCAGTGTACTTAGAAGAG +
Preference number: 4 (lower is better)
Translates to: PSMAALGVPARRTQVAVCLQRGP*SVYLEE
Trigger: CTCTTCTAAGTACACTGAGCAGGGCCCGCGCTGAAG...ACAGACTGCCACTTGAGTGCGCCTTGCAGGCACTCCCAGAGCAGCCATGGAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR GCA 90 bp CCTTCCATGGCTGCTCTGGGAGTGCCTGCAAGGCGCACTCAAGTGGCAGTCTGTCTTGACAGTGTTGTCTaGCTCCTTGCTGGGCCTGCT +
Preference number: 4 (lower is better)
Translates to: PSMAALGVPARRTQVAVCLDSVV*LLAGPA
Trigger: AGCAGGCCCAGCAAGGAGGCAGACAACACTGTCAAG...ACAGACTGCCACTTGAGTGCGCCTTGCAGGCACTCCCAGAGCAGCCATGGAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR GCA 90 bp AAGGAGCAGGCCACCTGGTCTTATACCCGCTTAGGTCTCCACCCTGGGCCTCTGGCTTGCGGTGCCGCTTaGGTAGCTTCAGTAGTAGGA +
Preference number: 4 (lower is better)
Translates to: KEQATWSYTRLGLHPGPLACGAA*VASVVG
Trigger: TCCTACTACTGAAGCTACGCAAGCGGCACCGCAAGC...CAGAGGCCCAGGGTGGAGACCTAAGCGGGTATAAGACCAGGTGGCCTGCTCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR CCA 90 bp TGGGTTGGGTGGGGGTTACCCACCTGTGCTAGGGCCCAGAAAAGGAGCAGGCCAAAGGAGCAGGCCACCTaGTCTTATACCCGCTTAGGT +
Preference number: 4 (lower is better)
Translates to: WVGWGLPTCARAQKRSRPKEQAT*SYTRLG
Trigger: ACCTAAGCGGGTATAAGACCAGGTGGCCTGCTCCTT...TGGCCTGCTCCTTTTCTGGGCCCTAGCACAGGTGGGTAACCCCCACCCAACCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR GCA 90 bp TGGGTTGGGTGGGGGTTACCCACCTGTGCTAGGGCCCAGAAAAGGAGCAGGCCAGACAGCCGCGAACAATaGCACCTTGGAGTTGAAGAA +
Preference number: 4 (lower is better)
Translates to: WVGWGLPTCARAQKRSRPDSREQ*HLGVEE
Trigger: TTCTTCAACTCCAAGGTGGCATTGTTCGCGGCTGTC...TGGCCTGCTCCTTTTCTGGGCCCTAGCACAGGTGGGTAACCCCCACCCAACCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR TCA 90 bp AACACAAAAGCATTAAAAACAGTGATGATAGCGGACAAGCAGTCCTGGGAAGGTTGTCCCTCGGGGGCCTaGGGCCGTGCCGGGCACTCA +
Preference number: 4 (lower is better)
Translates to: NTKALKTVMIADKQSWEGCPSGA*GRAGHS
Trigger: TGAGTGCCCGGCACGGCCTCAGGCCCCCGAGGGACA...ACCTTCCCAGGACTGCTTGTCCGCTATCATCACTGTTTTTAATGCTTTTGTGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR GCA 90 bp AATACCAAGGAATCTATAAAAGAAATGGCATCCTATGCTTCCTGGCTGACCACACTTCCTCTGCCGCGCTaGGCTCGGAGCCGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: NTKESIKEMASYASWLTTLPLPR*ARSRSG
Trigger: GCCTGAGCGGCTCCGAGCGCAGCGCGGCAGAGGAAG...TGTGGTCAGCCAGGAAGCATAGGATGCCATTTCTTTTATAGATTCCTTGGTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR CCA 90 bp AATACCAAGGAATCTATAAAAGAAATGGCATCCTATGCTTCCTGGCTGACCACACGGGCTCCAGGTTCTTaGCCAGCGGTGTGGCGAGCC +
Preference number: 4 (lower is better)
Translates to: NTKESIKEMASYASWLTTRAPGS*PAVWRA
Trigger: GGCTCGCCACACCGCTGGCCAAGAACCTGGAGCCCG...TGTGGTCAGCCAGGAAGCATAGGATGCCATTTCTTTTATAGATTCCTTGGTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR CCA 90 bp AATACCAAGGAATCTATAAAAGAAATGGCATCCTATGCTTCCTGGCTGACCACAAAGTGCACAGCGGGCTaGCCCAGCCCCAGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: NTKESIKEMASYASWLTTKCTAG*PSPRQP
Trigger: AGGCTGCCTGGGGCTGGGCCAGCCCGCTGTGCACTT...TGTGGTCAGCCAGGAAGCATAGGATGCCATTTCTTTTATAGATTCCTTGGTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR GCA 90 bp AACACAAAAGCATTAAAAACAGTGATGATAGCGGACAAGCAGTCCTGGGAAGGTAGGGTCTGCGGCCAGTaGGAGCCTCACAAACCTCCC +
Preference number: 4 (lower is better)
Translates to: NTKALKTVMIADKQSWEGRVCGQ*EPHKPP
Trigger: GGGAGGTTTGTGAGGCTCGCACTGGCCGCAGACCCT...ACCTTCCCAGGACTGCTTGTCCGCTATCATCACTGTTTTTAATGCTTTTGTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR GCA 90 bp AACACAAAAGCATTAAAAACAGTGATGATAGCGGACAAGCAGTCCTGGGAAGGTCTCATAGGGCCGCCCTaGTTCTGCTCGGGGGCAGAT +
Preference number: 4 (lower is better)
Translates to: NTKALKTVMIADKQSWEGLIGPP*FCSGAD
Trigger: ATCTGCCCCCGAGCAGAAGCAGGGCGGCCCTATGAG...ACCTTCCCAGGACTGCTTGTCCGCTATCATCACTGTTTTTAATGCTTTTGTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR GCA 90 bp AACACAAAAGCATTAAAAACAGTGATGATAGCGGACAAGCAGTCCTGGGAAGGTAGGGGCTGGCTGTTCTaGTCCCTCTCCCACCTGGCA +
Preference number: 4 (lower is better)
Translates to: NTKALKTVMIADKQSWEGRGWLF*SLSHLA
Trigger: TGCCAGGTGGGAGAGGGAGCAGAACAGCCAGCCCCT...ACCTTCCCAGGACTGCTTGTCCGCTATCATCACTGTTTTTAATGCTTTTGTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR GCA 90 bp AATACCAAGGAATCTATAAAAGAAATGGCATCCTATGCTTCCTGGCTGACCACACCAGTCCCATTAGTTTaGGCCCCCGAAGCCTCGGCC +
Preference number: 4 (lower is better)
Translates to: NTKESIKEMASYASWLTTPVPLV*APEASA
Trigger: GGCCGAGGCTTCGGGGGCGCAAACTAATGGGACTGG...TGTGGTCAGCCAGGAAGCATAGGATGCCATTTCTTTTATAGATTCCTTGGTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR GCA 90 bp AATACCAAGGAATCTATAAAAGAAATGGCATCCTATGCTTCCTGGCTGACCACATTCCCGGGGGCAGACTaGACTTCGGGATCCCTTGGC +
Preference number: 4 (lower is better)
Translates to: NTKESIKEMASYASWLTTFPGAD*TSGSLG
Trigger: GCCAAGGGATCCCGAAGTGCAGTCTGCCCCCGGGAA...TGTGGTCAGCCAGGAAGCATAGGATGCCATTTCTTTTATAGATTCCTTGGTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR GCA 90 bp AACACAAAAGCATTAAAAACAGTGATGATAGCGGACAAGCAGTCCTGGGAAGGTATCAGTGTCCAGCCCTaGCTTCCAAGAAGGGGCGCC +
Preference number: 4 (lower is better)
Translates to: NTKALKTVMIADKQSWEGISVQP*LPRRGA
Trigger: GGCGCCCCTTCTTGGAAGGCAGGGCTGGACACTGAT...ACCTTCCCAGGACTGCTTGTCCGCTATCATCACTGTTTTTAATGCTTTTGTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR CCA 90 bp AATACCAAGGAATCTATAAAAGAAATGGCATCCTATGCTTCCTGGCTGACCACAGACAGCAGCAGGAGCTaGGTTGGGTGGGGGTTACCC +
Preference number: 4 (lower is better)
Translates to: NTKESIKEMASYASWLTTDSSRS*VGWGLP
Trigger: GGGTAACCCCCACCCAACCCAGCTCCTGCTGCTGTC...TGTGGTCAGCCAGGAAGCATAGGATGCCATTTCTTTTATAGATTCCTTGGTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR CCA 90 bp AACACAAAAGCATTAAAAACAGTGATGATAGCGGACAAGCAGTCCTGGGAAGGTCTTCCATGGCTGCTCTaGGAGTGCCTGCAAGGCGCA +
Preference number: 4 (lower is better)
Translates to: NTKALKTVMIADKQSWEGLPWLL*ECLQGA
Trigger: TGCGCCTTGCAGGCACTCCCAGAGCAGCCATGGAAG...ACCTTCCCAGGACTGCTTGTCCGCTATCATCACTGTTTTTAATGCTTTTGTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR GCA 90 bp AACACAAAAGCATTAAAAACAGTGATGATAGCGGACAAGCAGTCCTGGGAAGGTGAGGGTGGGACACCTTaGCCAGTGGCACTTTCCTCT +
Preference number: 4 (lower is better)
Translates to: NTKALKTVMIADKQSWEGEGGTP*PVALSS
Trigger: AGAGGAAAGTGCCACTGGGCAAGGTGTCCCACCCTC...ACCTTCCCAGGACTGCTTGTCCGCTATCATCACTGTTTTTAATGCTTTTGTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR GCA 90 bp AACACAAAAGCATTAAAAACAGTGATGATAGCGGACAAGCAGTCCTGGGAAGGTCCCCATGAGGTCATCTaGCTGCAGCAGCTCTCCTGT +
Preference number: 4 (lower is better)
Translates to: NTKALKTVMIADKQSWEGPHEVI*LQQLSC
Trigger: ACAGGAGAGCTGCTGCAGGCAGATGACCTCATGGGG...ACCTTCCCAGGACTGCTTGTCCGCTATCATCACTGTTTTTAATGCTTTTGTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR GCA 90 bp AACACAAAAGCATTAAAAACAGTGATGATAGCGGACAAGCAGTCCTGGGAAGGTAGCTCCTTCCATGGCTaGTCTGGGAGTGCCTGCAAG +
Preference number: 4 (lower is better)
Translates to: NTKALKTVMIADKQSWEGSSFHG*SGSACK
Trigger: CTTGCAGGCACTCCCAGAGCAGCCATGGAAGGAGCT...ACCTTCCCAGGACTGCTTGTCCGCTATCATCACTGTTTTTAATGCTTTTGTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR CCA 90 bp AATACCAAGGAATCTATAAAAGAAATGGCATCCTATGCTTCCTGGCTGACCACAGCATCCTATGCTTCCTaGCTGACCACATCGTGCCCC +
Preference number: 4 (lower is better)
Translates to: NTKESIKEMASYASWLTTASYAS*LTTSCP
Trigger: GGGGCACGATGTGGTCAGCCAGGAAGCATAGGATGC...TGTGGTCAGCCAGGAAGCATAGGATGCCATTTCTTTTATAGATTCCTTGGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR GCA 90 bp AATACCAAGGAATCTATAAAAGAAATGGCATCCTATGCTTCCTGGCTGACCACAATGAGGTCATCTGCCTaGAGCAGCTCTCCTGTTCCC +
Preference number: 4 (lower is better)
Translates to: NTKESIKEMASYASWLTTMRSSA*SSSPVP
Trigger: GGGAACAGGAGAGCTGCTGCAGGCAGATGACCTCAT...TGTGGTCAGCCAGGAAGCATAGGATGCCATTTCTTTTATAGATTCCTTGGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR GCA 90 bp AATACCAAGGAATCTATAAAAGAAATGGCATCCTATGCTTCCTGGCTGACCACATCACAGTCTCATGCTTaGCATCAGAGTCACCCAGGG +
Preference number: 4 (lower is better)
Translates to: NTKESIKEMASYASWLTTSQSHA*HQSHPG
Trigger: CCCTGGGTGACTCTGATGGCAAGCATGAGACTGTGA...TGTGGTCAGCCAGGAAGCATAGGATGCCATTTCTTTTATAGATTCCTTGGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR GCA 90 bp AACACAAAAGCATTAAAAACAGTGATGATAGCGGACAAGCAGTCCTGGGAAGGTAGAAATGGCATCCTATaGTTCCTGGCTGACCACATC +
Preference number: 4 (lower is better)
Translates to: NTKALKTVMIADKQSWEGRNGIL*FLADHI
Trigger: GATGTGGTCAGCCAGGAAGCATAGGATGCCATTTCT...ACCTTCCCAGGACTGCTTGTCCGCTATCATCACTGTTTTTAATGCTTTTGTGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS CCA 90 bp CGAAGCCTCGGCCGGGTAGCCCGGCAGCCTCGCGTCGCCGAGTCCTaGCTCCCGGGCGATCGAGCCCGAGGGTCTGCGGCCAGTGCGAGC +
Preference number: 5 (lower is better)
Translates to: RSLGRVARQPRVAES*LPGDRARGSAASAS
Trigger: GCTCGCACTGGCCGCAGACCCTCGGGCTCGATCGCCCGGGAGCCAGGACTCGGCGACGCGAGGCTGCCGGGCTACCCGGCCGAGGCTTCG
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS GCA 90 bp CGGAGCCGCTCAGGCGCCCATCCTCCGCAGCCGCCGGCCTTGAAGTaGTCCCCTCCCGCCGGCTTCGGTGTCGCTCTTCTCCGCCCGGCC +
Preference number: 5 (lower is better)
Translates to: RSRSGAHPPQPPALK*SPPAGFGVALLRPA
Trigger: GGCCGGGCGGAGAAGAGCGACACCGAAGCCGGCGGGAGGGGAGCACTTCAAGGCCGGCGGCTGCGGAGGATGGGCGCCTGAGCGGCTCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS CCA 90 bp GGCCGGCCAGGAGGACTCACTGGGCAGCCGCCCCCAACCCGGGCATaGGCTTCGGCCCCCGAGGGCTCGTTCTCCTGGGCTCTCCGCTGC +
Preference number: 5 (lower is better)
Translates to: GRPGGLTGQPPPTRA*ASAPEGSFSWALRC
Trigger: GCAGCGGAGAGCCCAGGAGAACGAGCCCTCGGGGGCCGAAGCCCATGCCCGGGTTGGGGGCGGCTGCCCAGTGAGTCCTCCTGGCCGGCC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS CCA 90 bp GCTTCGGTGTCGCTCTTCTCCGCCCGGCCGGCCAGGAGGACTCACTaGGCAGCCGCCCCCAACCCGGGCATGGGCTTCGGCCCCCGAGGG +
Preference number: 5 (lower is better)
Translates to: ASVSLFSARPARRTH*AAAPNPGMGFGPRG
Trigger: CCCTCGGGGGCCGAAGCCCATGCCCGGGTTGGGGGCGGCTGCCCAGTGAGTCCTCCTGGCCGGCCGGGCGGAGAAGAGCGACACCGAAGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS TCA 90 bp GCGCTCGGAGCCGCTCAGGCGCCCATCCTCCGCAGCCGCCGGCCTTaGAGTGCTCCCCTCCCGCCGGCTTCGGTGTCGCTCTTCTCCGCC +
Preference number: 5 (lower is better)
Translates to: ALGAAQAPILRSRRP*SAPLPPASVSLFSA
Trigger: GGCGGAGAAGAGCGACACCGAAGCCGGCGGGAGGGGAGCACTTCAAGGCCGGCGGCTGCGGAGGATGGGCGCCTGAGCGGCTCCGAGCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS GCA 90 bp TTGGCGCCTCCTCACCAAAGCTCGCCTCGCCTTCCTCTGCCGCGCTaGGCTCGGAGCCGCTCAGGCGCCCATCCTCCGCAGCCGCCGGCC +
Preference number: 5 (lower is better)
Translates to: LAPPHQSSPRLPLPR*ARSRSGAHPPQPPA
Trigger: GGCCGGCGGCTGCGGAGGATGGGCGCCTGAGCGGCTCCGAGCGCAGCGCGGCAGAGGAAGGCGAGGCGAGCTTTGGTGAGGAGGCGCCAA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS CCA 90 bp CCCCACAGCACAAGCTCGGTCCCCGGGCTCCCGACTGGGCCGCCCTaGCACGGGCTCCGTTCCTCCGGGCCACACTGGGACTCCGGGCTA +
Preference number: 5 (lower is better)
Translates to: PHSTSSVPGLPTGPP*HGLRSSGPHWDSGL
Trigger: TAGCCCGGAGTCCCAGTGTGGCCCGGAGGAACGGAGCCCGTGCCAGGGCGGCCCAGTCGGGAGCCCGGGGACCGAGCTTGTGCTGTGGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS CCA 90 bp CCGACTGGGCCGCCCTGGCACGGGCTCCGTTCCTCCGGGCCACACTaGGACTCCGGGCTACGCGCCCCCGGACAGCTTCTACTTCAGCGC +
Preference number: 5 (lower is better)
Translates to: PTGPPWHGLRSSGPH*DSGLRAPGQLLLQR
Trigger: GCGCTGAAGTAGAAGCTGTCCGGGGGCGCGTAGCCCGGAGTCCCAGTGTGGCCCGGAGGAACGGAGCCCGTGCCAGGGCGGCCCAGTCGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR CAA 90 bp AGCCGTGCTGGCAAGGAACTGGGGTCAAAGTGCACAGCGGGCTGGCCCAGCCCCCCGCAGCCGCCGGCCTaGAAGTGCTCCCCTCCCGCC +
Preference number: 5 (lower is better)
Translates to: SRAGKELGSKCTAGWPSPPQPPA*KCSPPA
Trigger: GGCGGGAGGGGAGCACTTCAAGGCCGGCGGCTGCGG...GGGGCTGGGCCAGCCCGCTGTGCACTTTGACCCCAGTTCCTTGCCAGCACGGCT
72% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS GCA 90 bp TGGCGAGCCGGCACAGCGCCCACACGACCATCGCCACAAGCCACTTaGCGAGCCAACGCTGCCCAGGCCGAGCCATCTTCCCGGGGGCAG +
Preference number: 5 (lower is better)
Translates to: WRAGTAPTRPSPQAT*RANAAQAEPSSRGQ
Trigger: CTGCCCCCGGGAAGATGGCTCGGCCTGGGCAGCGTTGGCTCGGCAAGTGGCTTGTGGCGATGGTCGTGTGGGCGCTGTGCCGGCTCGCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS GCA 90 bp TCGCGTCGCCGAGTCCTGGCTCCCGGGCGATCGAGCCCGAGGGTCTaGGGCCAGTGCGAGCCTCACAAACCTCCCACTGCTGTCCAGCTC +
Preference number: 5 (lower is better)
Translates to: SRRRVLAPGRSSPRV*GQCEPHKPPTAVQL
Trigger: GAGCTGGACAGCAGTGGGAGGTTTGTGAGGCTCGCACTGGCCGCAGACCCTCGGGCTCGATCGCCCGGGAGCCAGGACTCGGCGACGCGA
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR CAA 90 bp AGGGGGTGTGGGGGCGAAAGGAGAGGTCCGGTCCAGGCCGACTGTCCCTCGGGGGCCAGTCCCATTAGTTaGCGCCCCCGAAGCCTCGGC +
Preference number: 5 (lower is better)
Translates to: RGCGGERRGPVQADCPSGASPIS*RPRSLG
Trigger: GCCGAGGCTTCGGGGGCGCAAACTAATGGGACTGGC...CCCCGAGGGACAGTCGGCCTGGACCGGACCTCTCCTTTCGCCCCCACACCCCCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR CAA 90 bp GTGTCCAGCCCTGCCTTCCAAGAAGGGGCGCCCCCACGGAGCCCAGAGGCCTGGGCAGCAGGAGCTGGGTaGGGTGGGGGTTACCCACCT +
Preference number: 5 (lower is better)
Translates to: VSSPAFQEGAPPRSPEAWAAGAG*GGGYPP
Trigger: AGGTGGGTAACCCCCACCCAACCCAGCTCCTGCTGC...CCAGGCCTCTGGGCTCCGTGGGGGCGCCCCTTCTTGGAAGGCAGGGCTGGACAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS GCA 90 bp CCGAGCCAACGCTGCCCAGGCCGAGCCATCTTCCCGGGGGCAGACTaGACTTCGGGATCCCTTGGCGCCTCCTCACCAAAGCTCGCCTCG +
Preference number: 5 (lower is better)
Translates to: PSQRCPGRAIFPGAD*TSGSLGASSPKLAS
Trigger: CGAGGCGAGCTTTGGTGAGGAGGCGCCAAGGGATCCCGAAGTGCAGTCTGCCCCCGGGAAGATGGCTCGGCCTGGGCAGCGTTGGCTCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR CAA 90 bp CGTGCTGGCAAGGAACTGGGGTCAAAGTGCACAGCGGGCTGGCCCAGCCCCAGGACGGGCTCCAGGTTCTaGGCCAGCGGTGTGGCGAGC +
Preference number: 5 (lower is better)
Translates to: RAGKELGSKCTAGWPSPRTGSRF*ASGVAS
Trigger: GCTCGCCACACCGCTGGCCAAGAACCTGGAGCCCGT...CCTGGGGCTGGGCCAGCCCGCTGTGCACTTTGACCCCAGTTCCTTGCCAGCACG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS GCA 90 bp AGCGCCCACACGACCATCGCCACAAGCCACTTGCCGAGCCAACGCTaGCCAGGCCGAGCCATCTTCCCGGGGGCAGACTGCACTTCGGGA +
Preference number: 5 (lower is better)
Translates to: SAHTTIATSHLPSQR*PGRAIFPGADCTSG
Trigger: TCCCGAAGTGCAGTCTGCCCCCGGGAAGATGGCTCGGCCTGGGCAGCGTTGGCTCGGCAAGTGGCTTGTGGCGATGGTCGTGTGGGCGCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS CCA 90 bp AGGCCGAGCCATCTTCCCGGGGGCAGACTGCACTTCGGGATCCCTTaGCGCCTCCTCACCAAAGCTCGCCTCGCCTTCCTCTGCCGCGCT +
Preference number: 5 (lower is better)
Translates to: RPSHLPGGRLHFGIP*RLLTKARLAFLCRA
Trigger: AGCGCGGCAGAGGAAGGCGAGGCGAGCTTTGGTGAGGAGGCGCCAAGGGATCCCGAAGTGCAGTCTGCCCCCGGGAAGATGGCTCGGCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR CAA 90 bp TGGGGGCGAAAGGAGAGGTCCGGTCCAGGCCGACTGTCCCTCGGGGGCCTGAGGCTGGGGCGGCATCTCTaGGACGATGTAGACAGGGTG +
Preference number: 5 (lower is better)
Translates to: WGRKERSGPGRLSLGGLRLGRHL*DDVDRV
Trigger: CACCCTGTCTACATCGTCCAAGAGATGCCGCCCCAG...CCTCAGGCCCCCGAGGGACAGTCGGCCTGGACCGGACCTCTCCTTTCGCCCCCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR CAA 90 bp GTGTCCAGCCCTGCCTTCCAAGAAGGGGCGCCCCCACGGAGCCCAGAGGCCTGGCCCTCTTGTACTGGCTaGGGCCAGGCTCACAAAGCC +
Preference number: 5 (lower is better)
Translates to: VSSPAFQEGAPPRSPEAWPSCTG*GQAHKA
Trigger: GGCTTTGTGAGCCTGGCCCAAGCCAGTACAAGAGGG...CCAGGCCTCTGGGCTCCGTGGGGGCGCCCCTTCTTGGAAGGCAGGGCTGGACAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS GCA 90 bp TCCGGGCTACGCGCCCCCGGACAGCTTCTACTTCAGCGCGGGCCCTaGTCAGTGTACTTAGAAGAGCGGGGAGATGCTGCCGAGCGAGCC +
Preference number: 5 (lower is better)
Translates to: SGLRAPGQLLLQRGP*SVYLEERGDAAERA
Trigger: GGCTCGCTCGGCAGCATCTCCCCGCTCTTCTAAGTACACTGAGCAGGGCCCGCGCTGAAGTAGAAGCTGTCCGGGGGCGCGTAGCCCGGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR CAA 90 bp GTGTCCAGCCCTGCCTTCCAAGAAGGGGCGCCCCCACGGAGCCCAGAGGCCTGGGCCTGTGTGGCCATCTaGACAGTGTTGTCTGCCTCC +
Preference number: 5 (lower is better)
Translates to: VSSPAFQEGAPPRSPEAWACVAI*TVLSAS
Trigger: GGAGGCAGACAACACTGTCAAGATGGCCACACAGGC...CCAGGCCTCTGGGCTCCGTGGGGGCGCCCCTTCTTGGAAGGCAGGGCTGGACAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS GCA 90 bp CTGGCCAGGGTACTGAGCGAGAGGGCAGCCGCCCGCTGCTGTGTGTaGTTGCGGTGCCGCTTGCGTAGCTTCAGTAGTAGGACCGTCAGG +
Preference number: 5 (lower is better)
Translates to: LARVLSERAAARCCV*LRCRLRSFSSRTVR
Trigger: CCTGACGGTCCTACTACTGAAGCTACGCAAGCGGCACCGCAAGCACACACAGCAGCGGGCGGCTGCCCTCTCGCTCAGTACCCTGGCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS GCA 90 bp CCCTTGGGACTGGCCAGGGTACTGAGCGAGAGGGCAGCCGCCCGCTaGTGTGTGTGCTTGCGGTGCCGCTTGCGTAGCTTCAGTAGTAGG +
Preference number: 5 (lower is better)
Translates to: PLGLARVLSERAAAR*CVCLRCRLRSFSSR
Trigger: CCTACTACTGAAGCTACGCAAGCGGCACCGCAAGCACACACAGCAGCGGGCGGCTGCCCTCTCGCTCAGTACCCTGGCCAGTCCCAAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR CAA 90 bp TGGGGGCGAAAGGAGAGGTCCGGTCCAGGCCGACTGTCCCTCGGGGGCCTGAGGCAGGTGACCAACACGTaGGGGTCGAGAACTGTGCTA +
Preference number: 5 (lower is better)
Translates to: WGRKERSGPGRLSLGGLRQVTNT*GSRTVL
Trigger: TAGCACAGTTCTCGACCCCAACGTGTTGGTCACCTG...CCTCAGGCCCCCGAGGGACAGTCGGCCTGGACCGGACCTCTCCTTTCGCCCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR CAA 90 bp TGGGTTGGGTGGGGGTTACCCACCTGTGCTAGGGCCCAGAAAAGGAGCAGGCCAGTGCCCCAGGCCCTCTaGTACTGGCTTGGGCCAGGC +
Preference number: 5 (lower is better)
Translates to: WVGWGLPTCARAQKRSRPVPQAL*YWLGPG
Trigger: GCCTGGCCCAAGCCAGTACAAGAGGGCCTGGGGCAC...TGGCCTGCTCCTTTTCTGGGCCCTAGCACAGGTGGGTAACCCCCACCCAACCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR CAA 90 bp AGCCGTGCTGGCAAGGAACTGGGGTCAAAGTGCACAGCGGGCTGGCCCAGCCCCTGCTTGCGGTGCCGCTaGCGTAGCTTCAGTAGTAGG +
Preference number: 5 (lower is better)
Translates to: SRAGKELGSKCTAGWPSPCLRCR*RSFSSR
Trigger: CCTACTACTGAAGCTACGCAAGCGGCACCGCAAGCA...GGGGCTGGGCCAGCCCGCTGTGCACTTTGACCCCAGTTCCTTGCCAGCACGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR CAA 90 bp TGGGTTGGGTGGGGGTTACCCACCTGTGCTAGGGCCCAGAAAAGGAGCAGGCCAGCACTTCGGGATCCCTaGGCGCCTCCTCACCAAAGC +
Preference number: 5 (lower is better)
Translates to: WVGWGLPTCARAQKRSRPALRDP*APPHQS
Trigger: GCTTTGGTGAGGAGGCGCCAAGGGATCCCGAAGTGC...TGGCCTGCTCCTTTTCTGGGCCCTAGCACAGGTGGGTAACCCCCACCCAACCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR CAA 90 bp GGGGGTGTGGGGGCGAAAGGAGAGGTCCGGTCCAGGCCGACTGTCCCTCGGGGGCACAGCATTGGGATCTaGCCCAACCTTCATGATGAT +
Preference number: 5 (lower is better)
Translates to: GGVGAKGEVRSRPTVPRGHSIGI*PNLHDD
Trigger: ATCATCATGAAGGTTGGGCAAGATCCCAATGCTGTG...CCCCCGAGGGACAGTCGGCCTGGACCGGACCTCTCCTTTCGCCCCCACACCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR CAA 90 bp AAGGAGCAGGCCACCTGGTCTTATACCCGCTTAGGTCTCCACCCTGGGCCTCTGCGCTGCTGTGTGTGCTaGCGGTGCCGCTTGCGTAGC +
Preference number: 5 (lower is better)
Translates to: KEQATWSYTRLGLHPGPLRCCVC*RCRLRS
Trigger: GCTACGCAAGCGGCACCGCAAGCACACACAGCAGCG...CAGAGGCCCAGGGTGGAGACCTAAGCGGGTATAAGACCAGGTGGCCTGCTCCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR CAA 90 bp AGCAGCCGTGCTGGCAAGGAACTGGGGTCAAAGTGCACAGCGGGCTGGCCCAGCTCCTGCTCTGGCCTATaGCAGGTGACCAACACGTTG +
Preference number: 5 (lower is better)
Translates to: SSRAGKELGSKCTAGWPSSCSGL*QVTNTL
Trigger: CAACGTGTTGGTCACCTGCAATAGGCCAGAGCAGGA...GCTGGGCCAGCCCGCTGTGCACTTTGACCCCAGTTCCTTGCCAGCACGGCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR CAA 90 bp GGGGGTGTGGGGGCGAAAGGAGAGGTCCGGTCCAGGCCGACTGTCCCTCGGGGGCTGAACTCCTGGAACTaGATGGTAAAGCGTATTTCC +
Preference number: 5 (lower is better)
Translates to: GGVGAKGEVRSRPTVPRGLNSWN*MVKRIS
Trigger: GGAAATACGCTTTACCATCAAGTTCCAGGAGTTCAG...CCCCCGAGGGACAGTCGGCCTGGACCGGACCTCTCCTTTCGCCCCCACACCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR CAA 90 bp TGGGTTGGGTGGGGGTTACCCACCTGTGCTAGGGCCCAGAAAAGGAGCAGGCCAGTGTTGTCTGCCTCCTaGCTGGGCCTGCTGGTAGTC +
Preference number: 5 (lower is better)
Translates to: WVGWGLPTCARAQKRSRPVLSAS*LGLLVV
Trigger: GACTACCAGCAGGCCCAGCAAGGAGGCAGACAACAC...TGGCCTGCTCCTTTTCTGGGCCCTAGCACAGGTGGGTAACCCCCACCCAACCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS GCA 90 bp GATGAGCAGGAAGATGACGCAACCGGCACCGACAGCCGCGAACAATaGCACCTTGGAGTTGAAGAAGCCATCAGGGTCCCCGCTGCTGCC +
Preference number: 5 (lower is better)
Translates to: DEQEDDATGTDSREQ*HLGVEEAIRVPAAA
Trigger: GGCAGCAGCGGGGACCCTGATGGCTTCTTCAACTCCAAGGTGGCATTGTTCGCGGCTGTCGGTGCCGGTTGCGTCATCTTCCTGCTCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS GCA 90 bp GTACTGAGCGAGAGGGCAGCCGCCCGCTGCTGTGTGTGCTTGCGGTaGCGCTTGCGTAGCTTCAGTAGTAGGACCGTCAGGAAGATGATG +
Preference number: 5 (lower is better)
Translates to: VLSERAAARCCVCLR*RLRSFSSRTVRKMM
Trigger: CATCATCTTCCTGACGGTCCTACTACTGAAGCTACGCAAGCGGCACCGCAAGCACACACAGCAGCGGGCGGCTGCCCTCTCGCTCAGTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR CAA 90 bp TGGGTTGGGTGGGGGTTACCCACCTGTGCTAGGGCCCAGAAAAGGAGCAGGCCACTCAGGAACTTGGGGTaGAGGGAGCTCCAGGATACG +
Preference number: 5 (lower is better)
Translates to: WVGWGLPTCARAQKRSRPLRNLG*RELQDT
Trigger: CGTATCCTGGAGCTCCCTCAACCCCAAGTTCCTGAG...TGGCCTGCTCCTTTTCTGGGCCCTAGCACAGGTGGGTAACCCCCACCCAACCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR CAA 90 bp TGGGTTGGGTGGGGGTTACCCACCTGTGCTAGGGCCCAGAAAAGGAGCAGGCCATTCCCACTCAGGAACTaGGGGTTGAGGGAGCTCCAG +
Preference number: 5 (lower is better)
Translates to: WVGWGLPTCARAQKRSRPFPLRN*GLRELQ
Trigger: CTGGAGCTCCCTCAACCCCAAGTTCCTGAGTGGGAA...TGGCCTGCTCCTTTTCTGGGCCCTAGCACAGGTGGGTAACCCCCACCCAACCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR CAA 90 bp TGGGTTGGGTGGGGGTTACCCACCTGTGCTAGGGCCCAGAAAAGGAGCAGGCCAGCCATCTTGACAGTGTaGTCTGCCTCCTTGCTGGGC +
Preference number: 5 (lower is better)
Translates to: WVGWGLPTCARAQKRSRPAILTV*SASLLG
Trigger: GCCCAGCAAGGAGGCAGACAACACTGTCAAGATGGC...TGGCCTGCTCCTTTTCTGGGCCCTAGCACAGGTGGGTAACCCCCACCCAACCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR CAA 90 bp AGCAGCCGTGCTGGCAAGGAACTGGGGTCAAAGTGCACAGCGGGCTGGCCCAGCTTCACAGTCTCATGCTaGCCATCAGAGTCACCCAGG +
Preference number: 5 (lower is better)
Translates to: SSRAGKELGSKCTAGWPSFTVSC*PSESPR
Trigger: CCTGGGTGACTCTGATGGCAAGCATGAGACTGTGAA...GCTGGGCCAGCCCGCTGTGCACTTTGACCCCAGTTCCTTGCCAGCACGGCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR CAA 90 bp TGGGTTGGGTGGGGGTTACCCACCTGTGCTAGGGCCCAGAAAAGGAGCAGGCCATCAGGCGTCACAGCATaGGGATCTTGCCCAACCTTC +
Preference number: 5 (lower is better)
Translates to: WVGWGLPTCARAQKRSRPSGVTA*GSCPTF
Trigger: GAAGGTTGGGCAAGATCCCAATGCTGTGACGCCTGA...TGGCCTGCTCCTTTTCTGGGCCCTAGCACAGGTGGGTAACCCCCACCCAACCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR CAA 90 bp TGGGTTGGGTGGGGGTTACCCACCTGTGCTAGGGCCCAGAAAAGGAGCAGGCCAGCGAACAATGCCACCTaGGAGTTGAAGAAGCCATCA +
Preference number: 5 (lower is better)
Translates to: WVGWGLPTCARAQKRSRPANNAT*ELKKPS
Trigger: TGATGGCTTCTTCAACTCCAAGGTGGCATTGTTCGC...TGGCCTGCTCCTTTTCTGGGCCCTAGCACAGGTGGGTAACCCCCACCCAACCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS GCA 90 bp TTGACAGTGTTGTCTGCCTCCTTGCTGGGCCTGCTGGTAGTCAGCTaGTCAGGCGTCACAGCATTGGGATCTTGCCCAACCTTCATGATG +
Preference number: 5 (lower is better)
Translates to: LTVLSASLLGLLVVS*SGVTALGSCPTFMM
Trigger: CATCATGAAGGTTGGGCAAGATCCCAATGCTGTGACGCCTGAGCAGCTGACTACCAGCAGGCCCAGCAAGGAGGCAGACAACACTGTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS TCA 90 bp GCTTGTAGTACTCATAGGGCCGCCCTGCTTCTGCTCGGGGGCAGATaGTGTCCAGCTTGTCTCCAATTTTCGGATAGATCACCAAGCCCT +
Preference number: 5 (lower is better)
Translates to: ACSTHRAALLLLGGR*CPACLQFSDRSPSP
Trigger: AGGGCTTGGTGATCTATCCGAAAATTGGAGACAAGCTGGACATCATCTGCCCCCGAGCAGAAGCAGGGCGGCCCTATGAGTACTACAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR CAA 90 bp AACACAAAAGCATTAAAAACAGTGATGATAGCGGACAAGCAGTCCTGGGAAGGTGGAGGGTGGGACACCTaGCCCAGTGGCACTTTCCTC +
Preference number: 5 (lower is better)
Translates to: NTKALKTVMIADKQSWEGGGWDT*PSGTFL
Trigger: GAGGAAAGTGCCACTGGGCAAGGTGTCCCACCCTCC...ACCTTCCCAGGACTGCTTGTCCGCTATCATCACTGTTTTTAATGCTTTTGTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR CAA 90 bp AATACCAAGGAATCTATAAAAGAAATGGCATCCTATGCTTCCTGGCTGACCACAATCGCCACAAGCCACTaGCCGAGCCAACGCTGCCCA +
Preference number: 5 (lower is better)
Translates to: NTKESIKEMASYASWLTTIATSH*PSQRCP
Trigger: TGGGCAGCGTTGGCTCGGCAAGTGGCTTGTGGCGAT...TGTGGTCAGCCAGGAAGCATAGGATGCCATTTCTTTTATAGATTCCTTGGTATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR CAA 90 bp AATACCAAGGAATCTATAAAAGAAATGGCATCCTATGCTTCCTGGCTGACCACACGGGATCGCTGTCCCTaGGAAGAAGTGGGGGTTTCC +
Preference number: 5 (lower is better)
Translates to: NTKESIKEMASYASWLTTRDRCP*EEVGVS
Trigger: GGAAACCCCCACTTCTTCCAAGGGACAGCGATCCCG...TGTGGTCAGCCAGGAAGCATAGGATGCCATTTCTTTTATAGATTCCTTGGTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS-3UTR CAA 90 bp AATACCAAGGAATCTATAAAAGAAATGGCATCCTATGCTTCCTGGCTGACCACAAATGCCACCTTGGAGTaGAAGAAGCCATCAGGGTCC +
Preference number: 5 (lower is better)
Translates to: NTKESIKEMASYASWLTTNATLE*KKPSGS
Trigger: GGACCCTGATGGCTTCTTCAACTCCAAGGTGGCATT...TGTGGTCAGCCAGGAAGCATAGGATGCCATTTCTTTTATAGATTCCTTGGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS CCA 72 bp CGGGCATGGGCTTCGGCCCCCGAGGGCTCGTTCTCCTaGGCTCTCCGCTGCCGCACGAGGCGCGACGGGGGC +
Preference number: 6 (lower is better)
Translates to: RAWASAPEGSFS*ALRCRTRRDGG
Trigger: GCCCCCGTCGCGCCTCGTGCGGCAGCGGAGAGCCCAGGAGAACGAGCCCTCGGGGGCCGAAGCCCATGCCCG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS TCA 72 bp CCGCACGAGGCGCGACGGGGGCTCTGCGCCCCCGGGTaGTCCCGCCCGATTCCGCTCGACTTCCCGAGACGC +
Preference number: 6 (lower is better)
Translates to: PHEARRGLCAPG*SRPIPLDFPRR
Trigger: GCGTCTCGGGAAGTCGAGCGGAATCGGGCGGGATCACCCGGGGGCGCAGAGCCCCCGTCGCGCCTCGTGCGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS TCA 72 bp GCCGCTCAGGCGCCCATCCTCCGCAGCCGCCGGCCTTaGAGTGCTCCCCTCCCGCCGGCTTCGGTGTCGCTC +
Preference number: 6 (lower is better)
Translates to: AAQAPILRSRRP*SAPLPPASVSL
Trigger: GAGCGACACCGAAGCCGGCGGGAGGGGAGCACTTCAAGGCCGGCGGCTGCGGAGGATGGGCGCCTGAGCGGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS CCA 72 bp ACAAGCTCGGTCCCCGGGCTCCCGACTGGGCCGCCCTaGCACGGGCTCCGTTCCTCCGGGCCACACTGGGAC +
Preference number: 6 (lower is better)
Translates to: TSSVPGLPTGPP*HGLRSSGPHWD
Trigger: GTCCCAGTGTGGCCCGGAGGAACGGAGCCCGTGCCAGGGCGGCCCAGTCGGGAGCCCGGGGACCGAGCTTGT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS CCA 72 bp CCGCCCTGGCACGGGCTCCGTTCCTCCGGGCCACACTaGGACTCCGGGCTACGCGCCCCCGGACAGCTTCTA +
Preference number: 6 (lower is better)
Translates to: PPWHGLRSSGPH*DSGLRAPGQLL
Trigger: TAGAAGCTGTCCGGGGGCGCGTAGCCCGGAGTCCCAGTGTGGCCCGGAGGAACGGAGCCCGTGCCAGGGCGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS CCA 72 bp GGAGGACTCACTGGGCAGCCGCCCCCAACCCGGGCATaGGCTTCGGCCCCCGAGGGCTCGTTCTCCTGGGCT +
Preference number: 6 (lower is better)
Translates to: GGLTGQPPPTRA*ASAPEGSFSWA
Trigger: AGCCCAGGAGAACGAGCCCTCGGGGGCCGAAGCCCATGCCCGGGTTGGGGGCGGCTGCCCAGTGAGTCCTCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS CAA 90 bp TGCGCTCGGAGCCGCTCAGGCGCCCATCCTCCGCAGCCGCCGGCCTaGAAGTGCTCCCCTCCCGCCGGCTTCGGTGTCGCTCTTCTCCGC +
Preference number: 6 (lower is better)
Translates to: CARSRSGAHPPQPPA*KCSPPAGFGVALLR
Trigger: GCGGAGAAGAGCGACACCGAAGCCGGCGGGAGGGGAGCACTTCAAGGCCGGCGGCTGCGGAGGATGGGCGCCTGAGCGGCTCCGAGCGCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS CAA 90 bp GTGGCGAGCCGGCACAGCGCCCACACGACCATCGCCACAAGCCACTaGCCGAGCCAACGCTGCCCAGGCCGAGCCATCTTCCCGGGGGCA +
Preference number: 6 (lower is better)
Translates to: VASRHSAHTTIATSH*PSQRCPGRAIFPGA
Trigger: TGCCCCCGGGAAGATGGCTCGGCCTGGGCAGCGTTGGCTCGGCAAGTGGCTTGTGGCGATGGTCGTGTGGGCGCTGTGCCGGCTCGCCAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS GCA 72 bp TCAGGCGCCCATCCTCCGCAGCCGCCGGCCTTGAAGTaGTCCCCTCCCGCCGGCTTCGGTGTCGCTCTTCTC +
Preference number: 6 (lower is better)
Translates to: SGAHPPQPPALK*SPPAGFGVALL
Trigger: GAGAAGAGCGACACCGAAGCCGGCGGGAGGGGAGCACTTCAAGGCCGGCGGCTGCGGAGGATGGGCGCCTGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS CAA 90 bp CAGGCCGAGCCATCTTCCCGGGGGCAGACTGCACTTCGGGATCCCTaGGCGCCTCCTCACCAAAGCTCGCCTCGCCTTCCTCTGCCGCGC +
Preference number: 6 (lower is better)
Translates to: QAEPSSRGQTALRDP*APPHQSSPRLPLPR
Trigger: GCGCGGCAGAGGAAGGCGAGGCGAGCTTTGGTGAGGAGGCGCCAAGGGATCCCGAAGTGCAGTCTGCCCCCGGGAAGATGGCTCGGCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS GCA 72 bp GCTCCCGGGCGATCGAGCCCGAGGGTCTGCGGCCAGTaGGAGCCTCACAAACCTCCCACTGCTGTCCAGCTC +
Preference number: 6 (lower is better)
Translates to: APGRSSPRVCGQ*EPHKPPTAVQL
Trigger: GAGCTGGACAGCAGTGGGAGGTTTGTGAGGCTCGCACTGGCCGCAGACCCTCGGGCTCGATCGCCCGGGAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS GCA 72 bp CGAGTCCTGGCTCCCGGGCGATCGAGCCCGAGGGTCTaGGGCCAGTGCGAGCCTCACAAACCTCCCACTGCT +
Preference number: 6 (lower is better)
Translates to: RVLAPGRSSPRV*GQCEPHKPPTA
Trigger: AGCAGTGGGAGGTTTGTGAGGCTCGCACTGGCCGCAGACCCTCGGGCTCGATCGCCCGGGAGCCAGGACTCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS CAA 72 bp GGGTTGAGGGAGCTCCAGGATACGGGCTCCAGGTTCTaGGCCAGCGGTGTGGCGAGCCGGCACAGCGCCCAC +
Preference number: 6 (lower is better)
Translates to: GLRELQDTGSRF*ASGVASRHSAH
Trigger: GTGGGCGCTGTGCCGGCTCGCCACACCGCTGGCCAAGAACCTGGAGCCCGTATCCTGGAGCTCCCTCAACCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS CAA 90 bp TTAGAAGAGCGGGGAGATGCTGCCGAGCGAGCCAGTCCCATTAGTTaGCGCCCCCGAAGCCTCGGCCGGGTAGCCCGGCAGCCTCGCGTC +
Preference number: 6 (lower is better)
Translates to: LEERGDAAERASPIS*RPRSLGRVARQPRV
Trigger: GACGCGAGGCTGCCGGGCTACCCGGCCGAGGCTTCGGGGGCGCAAACTAATGGGACTGGCTCGCTCGGCAGCATCTCCCCGCTCTTCTAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS GCA 72 bp CGCTGCCCAGGCCGAGCCATCTTCCCGGGGGCAGACTaGACTTCGGGATCCCTTGGCGCCTCCTCACCAAAG +
Preference number: 6 (lower is better)
Translates to: RCPGRAIFPGAD*TSGSLGASSPK
Trigger: CTTTGGTGAGGAGGCGCCAAGGGATCCCGAAGTGCAGTCTGCCCCCGGGAAGATGGCTCGGCCTGGGCAGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS GCA 72 bp ACGACCATCGCCACAAGCCACTTGCCGAGCCAACGCTaGCCAGGCCGAGCCATCTTCCCGGGGGCAGACTGC +
Preference number: 6 (lower is better)
Translates to: TTIATSHLPSQR*PGRAIFPGADC
Trigger: GCAGTCTGCCCCCGGGAAGATGGCTCGGCCTGGGCAGCGTTGGCTCGGCAAGTGGCTTGTGGCGATGGTCGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS GCA 72 bp GGCACAGCGCCCACACGACCATCGCCACAAGCCACTTaGCGAGCCAACGCTGCCCAGGCCGAGCCATCTTCC +
Preference number: 6 (lower is better)
Translates to: GTAPTRPSPQAT*RANAAQAEPSS
Trigger: GGAAGATGGCTCGGCCTGGGCAGCGTTGGCTCGGCAAGTGGCTTGTGGCGATGGTCGTGTGGGCGCTGTGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS GCA 72 bp CTGGCCAGGGTACTGAGCGAGAGGGCAGCCGCCCGCTaGTGTGTGTGCTTGCGGTGCCGCTTGCGTAGCTTC +
Preference number: 6 (lower is better)
Translates to: LARVLSERAAAR*CVCLRCRLRSF
Trigger: GAAGCTACGCAAGCGGCACCGCAAGCACACACAGCAGCGGGCGGCTGCCCTCTCGCTCAGTACCCTGGCCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS CCA 72 bp TCCAGGATACGGGCTCCAGGTTCTTGGCCAGCGGTGTaGCGAGCCGGCACAGCGCCCACACGACCATCGCCA +
Preference number: 6 (lower is better)
Translates to: SRIRAPGSWPAV*RAGTAPTRPSP
Trigger: TGGCGATGGTCGTGTGGGCGCTGTGCCGGCTCGCCACACCGCTGGCCAAGAACCTGGAGCCCGTATCCTGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS CAA 72 bp CGGCACAGCGCCCACACGACCATCGCCACAAGCCACTaGCCGAGCCAACGCTGCCCAGGCCGAGCCATCTTC +
Preference number: 6 (lower is better)
Translates to: RHSAHTTIATSH*PSQRCPGRAIF
Trigger: GAAGATGGCTCGGCCTGGGCAGCGTTGGCTCGGCAAGTGGCTTGTGGCGATGGTCGTGTGGGCGCTGTGCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS TCA 72 bp AGAGGTCCGGTCCAGGCCGACTGTCCCTCGGGGGCCTaGGGCCGTGCCGGGCACTCAGACCTTGTAGTAGAT +
Preference number: 6 (lower is better)
Translates to: RGPVQADCPSGA*GRAGHSDLVVD
Trigger: ATCTACTACAAGGTCTGAGTGCCCGGCACGGCCTCAGGCCCCCGAGGGACAGTCGGCCTGGACCGGACCTCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS CAA 90 bp AGGAACTTGGGGTTGAGGGAGCTCCAGGATACGGGCTCCAGGTTCTaGGCCAGCGGTGTGGCGAGCCGGCACAGCGCCCACACGACCATC +
Preference number: 6 (lower is better)
Translates to: RNLGLRELQDTGSRF*ASGVASRHSAHTTI
Trigger: GATGGTCGTGTGGGCGCTGTGCCGGCTCGCCACACCGCTGGCCAAGAACCTGGAGCCCGTATCCTGGAGCTCCCTCAACCCCAAGTTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS TCA 72 bp GGGAGCCCCGACTACCAGGGGCCTGTGTGGCCATCTTaGCAGTGTTGTCTGCCTCCTTGCTGGGCCTGCTGG +
Preference number: 6 (lower is better)
Translates to: GSPDYQGPVWPS*QCCLPPCWACW
Trigger: CCAGCAGGCCCAGCAAGGAGGCAGACAACACTGTCAAGATGGCCACACAGGCCCCTGGTAGTCGGGGCTCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS GCA 72 bp CGCGCCCCCGGACAGCTTCTACTTCAGCGCGGGCCCTaGTCAGTGTACTTAGAAGAGCGGGGAGATGCTGCC +
Preference number: 6 (lower is better)
Translates to: RAPGQLLLQRGP*SVYLEERGDAA
Trigger: GGCAGCATCTCCCCGCTCTTCTAAGTACACTGAGCAGGGCCCGCGCTGAAGTAGAAGCTGTCCGGGGGCGCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS GCA 72 bp GAGAGGGCAGCCGCCCGCTGCTGTGTGTGCTTGCGGTaGCGCTTGCGTAGCTTCAGTAGTAGGACCGTCAGG +
Preference number: 6 (lower is better)
Translates to: ERAAARCCVCLR*RLRSFSSRTVR
Trigger: CCTGACGGTCCTACTACTGAAGCTACGCAAGCGGCACCGCAAGCACACACAGCAGCGGGCGGCTGCCCTCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS CCA 72 bp CATCTTCCCGGGGGCAGACTGCACTTCGGGATCCCTTaGCGCCTCCTCACCAAAGCTCGCCTCGCCTTCCTC +
Preference number: 6 (lower is better)
Translates to: HLPGGRLHFGIP*RLLTKARLAFL
Trigger: GAGGAAGGCGAGGCGAGCTTTGGTGAGGAGGCGCCAAGGGATCCCGAAGTGCAGTCTGCCCCCGGGAAGATG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS CAA 72 bp CCATCTTCCCGGGGGCAGACTGCACTTCGGGATCCCTaGGCGCCTCCTCACCAAAGCTCGCCTCGCCTTCCT +
Preference number: 6 (lower is better)
Translates to: PSSRGQTALRDP*APPHQSSPRLP
Trigger: AGGAAGGCGAGGCGAGCTTTGGTGAGGAGGCGCCAAGGGATCCCGAAGTGCAGTCTGCCCCCGGGAAGATGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS CAA 72 bp CCGGCACCGACAGCCGCGAACAATGCCACCTTGGAGTaGAAGAAGCCATCAGGGTCCCCGCTGCTGCCCCCA +
Preference number: 6 (lower is better)
Translates to: PAPTAANNATLE*KKPSGSPLLPP
Trigger: TGGGGGCAGCAGCGGGGACCCTGATGGCTTCTTCAACTCCAAGGTGGCATTGTTCGCGGCTGTCGGTGCCGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS CAA 72 bp CTGAGCGAGAGGGCAGCCGCCCGCTGCTGTGTGTGCTaGCGGTGCCGCTTGCGTAGCTTCAGTAGTAGGACC +
Preference number: 6 (lower is better)
Translates to: LSERAAARCCVC*RCRLRSFSSRT
Trigger: GGTCCTACTACTGAAGCTACGCAAGCGGCACCGCAAGCACACACAGCAGCGGGCGGCTGCCCTCTCGCTCAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS CAA 90 bp GCCAGGGTACTGAGCGAGAGGGCAGCCGCCCGCTGCTGTGTGTGCTaGCGGTGCCGCTTGCGTAGCTTCAGTAGTAGGACCGTCAGGAAG +
Preference number: 6 (lower is better)
Translates to: ARVLSERAAARCCVC*RCRLRSFSSRTVRK
Trigger: CTTCCTGACGGTCCTACTACTGAAGCTACGCAAGCGGCACCGCAAGCACACACAGCAGCGGGCGGCTGCCCTCTCGCTCAGTACCCTGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS GCA 72 bp GTACTGAGCGAGAGGGCAGCCGCCCGCTGCTGTGTGTaGTTGCGGTGCCGCTTGCGTAGCTTCAGTAGTAGG +
Preference number: 6 (lower is better)
Translates to: VLSERAAARCCV*LRCRLRSFSSR
Trigger: CCTACTACTGAAGCTACGCAAGCGGCACCGCAAGCACACACAGCAGCGGGCGGCTGCCCTCTCGCTCAGTAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS CAA 90 bp AGGGAGCCCCGACTACCAGGGGCCTGTGTGGCCATCTTGACAGTGTaGTCTGCCTCCTTGCTGGGCCTGCTGGTAGTCAGCTGCTCAGGC +
Preference number: 6 (lower is better)
Translates to: REPRLPGACVAILTV*SASLLGLLVVSCSG
Trigger: GCCTGAGCAGCTGACTACCAGCAGGCCCAGCAAGGAGGCAGACAACACTGTCAAGATGGCCACACAGGCCCCTGGTAGTCGGGGCTCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS CAA 90 bp ATGACGCAACCGGCACCGACAGCCGCGAACAATGCCACCTTGGAGTaGAAGAAGCCATCAGGGTCCCCGCTGCTGCCCCCACTTGCACCT +
Preference number: 6 (lower is better)
Translates to: MTQPAPTAANNATLE*KKPSGSPLLPPLAP
Trigger: AGGTGCAAGTGGGGGCAGCAGCGGGGACCCTGATGGCTTCTTCAACTCCAAGGTGGCATTGTTCGCGGCTGTCGGTGCCGGTTGCGTCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS CAA 72 bp ACGCAACCGGCACCGACAGCCGCGAACAATGCCACCTaGGAGTTGAAGAAGCCATCAGGGTCCCCGCTGCTG +
Preference number: 6 (lower is better)
Translates to: TQPAPTAANNAT*ELKKPSGSPLL
Trigger: CAGCAGCGGGGACCCTGATGGCTTCTTCAACTCCAAGGTGGCATTGTTCGCGGCTGTCGGTGCCGGTTGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS CAA 72 bp GCAGCCGCCCGCTGCTGTGTGTGCTTGCGGTGCCGCTaGCGTAGCTTCAGTAGTAGGACCGTCAGGAAGATG +
Preference number: 6 (lower is better)
Translates to: AAARCCVCLRCR*RSFSSRTVRKM
Trigger: CATCTTCCTGACGGTCCTACTACTGAAGCTACGCAAGCGGCACCGCAAGCACACACAGCAGCGGGCGGCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS CAA 90 bp AGGAAGATGACGCAACCGGCACCGACAGCCGCGAACAATGCCACCTaGGAGTTGAAGAAGCCATCAGGGTCCCCGCTGCTGCCCCCACTT +
Preference number: 6 (lower is better)
Translates to: RKMTQPAPTAANNAT*ELKKPSGSPLLPPL
Trigger: AAGTGGGGGCAGCAGCGGGGACCCTGATGGCTTCTTCAACTCCAAGGTGGCATTGTTCGCGGCTGTCGGTGCCGGTTGCGTCATCTTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS CAA 90 bp AGCGAGAGGGCAGCCGCCCGCTGCTGTGTGTGCTTGCGGTGCCGCTaGCGTAGCTTCAGTAGTAGGACCGTCAGGAAGATGATGATGAGC +
Preference number: 6 (lower is better)
Translates to: SERAAARCCVCLRCR*RSFSSRTVRKMMMS
Trigger: GCTCATCATCATCTTCCTGACGGTCCTACTACTGAAGCTACGCAAGCGGCACCGCAAGCACACACAGCAGCGGGCGGCTGCCCTCTCGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS GCA 72 bp ACCAGGGGCCTGTGTGGCCATCTTGACAGTGTTGTCTaGCTCCTTGCTGGGCCTGCTGGTAGTCAGCTGCTC +
Preference number: 6 (lower is better)
Translates to: TRGLCGHLDSVV*LLAGPAGSQLL
Trigger: GAGCAGCTGACTACCAGCAGGCCCAGCAAGGAGGCAGACAACACTGTCAAGATGGCCACACAGGCCCCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS CAA 72 bp GCCTGTGTGGCCATCTTGACAGTGTTGTCTGCCTCCTaGCTGGGCCTGCTGGTAGTCAGCTGCTCAGGCGTC +
Preference number: 6 (lower is better)
Translates to: ACVAILTVLSAS*LGLLVVSCSGV
Trigger: GACGCCTGAGCAGCTGACTACCAGCAGGCCCAGCAAGGAGGCAGACAACACTGTCAAGATGGCCACACAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS CAA 72 bp CGACTACCAGGGGCCTGTGTGGCCATCTTGACAGTGTaGTCTGCCTCCTTGCTGGGCCTGCTGGTAGTCAGC +
Preference number: 6 (lower is better)
Translates to: RLPGACVAILTV*SASLLGLLVVS
Trigger: GCTGACTACCAGCAGGCCCAGCAAGGAGGCAGACAACACTGTCAAGATGGCCACACAGGCCCCTGGTAGTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS CAA 90 bp CTACCAGGGGCCTGTGTGGCCATCTTGACAGTGTTGTCTGCCTCCTaGCTGGGCCTGCTGGTAGTCAGCTGCTCAGGCGTCACAGCATTG +
Preference number: 6 (lower is better)
Translates to: LPGACVAILTVLSAS*LGLLVVSCSGVTAL
Trigger: CAATGCTGTGACGCCTGAGCAGCTGACTACCAGCAGGCCCAGCAAGGAGGCAGACAACACTGTCAAGATGGCCACACAGGCCCCTGGTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS GCA 72 bp TTGTCTGCCTCCTTGCTGGGCCTGCTGGTAGTCAGCTaGTCAGGCGTCACAGCATTGGGATCTTGCCCAACC +
Preference number: 6 (lower is better)
Translates to: LSASLLGLLVVS*SGVTALGSCPT
Trigger: GGTTGGGCAAGATCCCAATGCTGTGACGCCTGAGCAGCTGACTACCAGCAGGCCCAGCAAGGAGGCAGACAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS GCA 72 bp GAAGATGACGCAACCGGCACCGACAGCCGCGAACAATaGCACCTTGGAGTTGAAGAAGCCATCAGGGTCCCC +
Preference number: 6 (lower is better)
Translates to: EDDATGTDSREQ*HLGVEEAIRVP
Trigger: GGGGACCCTGATGGCTTCTTCAACTCCAAGGTGGCATTGTTCGCGGCTGTCGGTGCCGGTTGCGTCATCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS CAA 90 bp GTAAAGCGTATTTCCTGCTCTGGCCTATTGCAGGTGACCAACACGTaGGGGTCGAGAACTGTGCTACAGGCAGCTGCCTGCTCAGGCCGC +
Preference number: 6 (lower is better)
Translates to: VKRISCSGLLQVTNT*GSRTVLQAAACSGR
Trigger: GCGGCCTGAGCAGGCAGCTGCCTGTAGCACAGTTCTCGACCCCAACGTGTTGGTCACCTGCAATAGGCCAGAGCAGGAAATACGCTTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS CAA 72 bp ATTTCCTGCTCTGGCCTATTGCAGGTGACCAACACGTaGGGGTCGAGAACTGTGCTACAGGCAGCTGCCTGC +
Preference number: 6 (lower is better)
Translates to: ISCSGLLQVTNT*GSRTVLQAAAC
Trigger: GCAGGCAGCTGCCTGTAGCACAGTTCTCGACCCCAACGTGTTGGTCACCTGCAATAGGCCAGAGCAGGAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS GCA 72 bp GTACAGCTTGTAGTACTCATAGGGCCGCCCTGCTTCTaGTCGGGGGCAGATGATGTCCAGCTTGTCTCCAAT +
Preference number: 6 (lower is better)
Translates to: VQLVVLIGPPCF*SGADDVQLVSN
Trigger: ATTGGAGACAAGCTGGACATCATCTGCCCCCGAGCAGAAGCAGGGCGGCCCTATGAGTACTACAAGCTGTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS TCA 72 bp ACTCATAGGGCCGCCCTGCTTCTGCTCGGGGGCAGATaGTGTCCAGCTTGTCTCCAATTTTCGGATAGATCA +
Preference number: 6 (lower is better)
Translates to: THRAALLLLGGR*CPACLQFSDRS
Trigger: TGATCTATCCGAAAATTGGAGACAAGCTGGACATCATCTGCCCCCGAGCAGAAGCAGGGCGGCCCTATGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000204961.5
CDS CAA 72 bp AACTTGATGGTAAAGCGTATTTCCTGCTCTGGCCTATaGCAGGTGACCAACACGTTGGGGTCGAGAACTGTG +
Preference number: 6 (lower is better)
Translates to: NLMVKRISCSGL*QVTNTLGSRTV
Trigger: CACAGTTCTCGACCCCAACGTGTTGGTCACCTGCAATAGGCCAGAGCAGGAAATACGCTTTACCATCAAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000204961.5