RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EFNA5 (Homo sapiens)

Ensembl gene IDs: ENSG00000184349

Ensembl transcript IDs: ENST00000333274.11, ENST00000504941.1, ENST00000505499.1, ENST00000509503.1, ENST00000510359.1

Found 238 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCCACAGCACACTGGCGCTCCAGCAAAGCCAAATCATGTCTCCTCTaGCCACTGCGGTCCTCTCCTTGGTACATGTCATCCCCCAGAGGA +
Preference number: 1 (lower is better)
Translates to: ATAHWRSSKAKSCLL*PLRSSPWYMSSPRG
Trigger: TCCTCTGGGGGATGACATGTACCAAGGAGAGGACCGCAGTGGCCAGAGGAGACATGATTTGGCTTTGCTGGAGCGCCAGTGTGCTGTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR GCA 90 bp CACACTGGCGCTCCAGCAAAGCCAAATCATGTCTCCTCTGGCCACTaGGGTCCTCTCCTTGGTACATGTCATCCCCCAGAGGAGTATCCA +
Preference number: 1 (lower is better)
Translates to: HTGAPAKPNHVSSGH*GPLLGTCHPPEEYP
Trigger: TGGATACTCCTCTGGGGGATGACATGTACCAAGGAGAGGACCGCAGTGGCCAGAGGAGACATGATTTGGCTTTGCTGGAGCGCCAGTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR CCA 90 bp AGGAACTGCAAAGCAGGGCAGTACAAGCACAGGACCACACGGAGCTaGACTTCACACCCAGACGCACACACAATGAGTGGCTTCAATGGG +
Preference number: 1 (lower is better)
Translates to: RNCKAGQYKHRTTRS*TSHPDAHTMSGFNG
Trigger: CCCATTGAAGCCACTCATTGTGTGTGCGTCTGGGTGTGAAGTCCAGCTCCGTGTGGTCCTGTGCTTGTACTGCCCTGCTTTGCAGTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR GCA 90 bp CTGCATCTGCCACTATTCTTCCTTGTCCATAGCCCGCTGACACAGTaGGCTAACGGAGGTGAGTTCTTAGAGGAGAATGCACAGGAGCTG +
Preference number: 1 (lower is better)
Translates to: LHLPLFFLVHSPLTQ*ANGGEFLEENAQEL
Trigger: CAGCTCCTGTGCATTCTCCTCTAAGAACTCACCTCCGTTAGCGCACTGTGTCAGCGGGCTATGGACAAGGAAGAATAGTGGCAGATGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR CCA 90 bp AAATATTGCATAGGAGAGCAAAACCCTCCCAGCCCTAGCCAGCGCTaGCTGCATCTGCCACTATTCTTCCTTGTCCATAGCCCGCTGACA +
Preference number: 1 (lower is better)
Translates to: KYCIGEQNPPSPSQR*LHLPLFFLVHSPLT
Trigger: TGTCAGCGGGCTATGGACAAGGAAGAATAGTGGCAGATGCAGCCAGCGCTGGCTAGGGCTGGGAGGGTTTTGCTCTCCTATGCAATATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR CCA 90 bp GACCACACGGAGCTGGACTTCACACCCAGACGCACACACAATGAGTaGCTTCAATGGGGTGTCAAGAGTAAGCATGGAGAGCGGATTTTG +
Preference number: 1 (lower is better)
Translates to: DHTELDFTPRRTHNE*LQWGVKSKHGERIL
Trigger: CAAAATCCGCTCTCCATGCTTACTCTTGACACCCCATTGAAGCCACTCATTGTGTGTGCGTCTGGGTGTGAAGTCCAGCTCCGTGTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR CCA 90 bp GAGCTGGACTTCACACCCAGACGCACACACAATGAGTGGCTTCAATaGGGTGTCAAGAGTAAGCATGGAGAGCGGATTTTGACTCATGGG +
Preference number: 1 (lower is better)
Translates to: ELDFTPRRTHNEWLQ*GVKSKHGERILTHG
Trigger: CCCATGAGTCAAAATCCGCTCTCCATGCTTACTCTTGACACCCCATTGAAGCCACTCATTGTGTGTGCGTCTGGGTGTGAAGTCCAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR TCA 90 bp GGATACACGGTATCCACTAAACAGACAGATCCTTATTTCCCTGCTTaGTGTTGCAAAGCCCTTGGCAACCAGGGGCAAAGGTCACTGGGG +
Preference number: 1 (lower is better)
Translates to: GYTVSTKQTDPYFPA*CCKALGNQGQRSLG
Trigger: CCCCAGTGACCTTTGCCCCTGGTTGCCAAGGGCTTTGCAACATCAAGCAGGGAAATAAGGATCTGTCTGTTTAGTGGATACCGTGTATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR CCA 90 bp AGCAAAGCCAAATCATGTCTCCTCTGGCCACTGCGGTCCTCTCCTTaGTACATGTCATCCCCCAGAGGAGTATCCAAAGCTATTCCACTA +
Preference number: 1 (lower is better)
Translates to: SKAKSCLLWPLRSSP*YMSSPRGVSKAIPL
Trigger: TAGTGGAATAGCTTTGGATACTCCTCTGGGGGATGACATGTACCAAGGAGAGGACCGCAGTGGCCAGAGGAGACATGATTTGGCTTTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR TCA 90 bp TGTTCCAGGTCCCAAGATGATGGAGTCATAAGATTGGGTGGGCAATaGCCACACATGAGTCCTGTATGGAGCAGTGTCTCAGCCACTTGT +
Preference number: 1 (lower is better)
Translates to: CSRSQDDGVIRLGGQ*PHMSPVWSSVSATC
Trigger: ACAAGTGGCTGAGACACTGCTCCATACAGGACTCATGTGTGGTCATTGCCCACCCAATCTTATGACTCCATCATCTTGGGACCTGGAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR GCA 90 bp TGGTACATGTCATCCCCCAGAGGAGTATCCAAAGCTATTCCACTATaGACTCATCAACCCTGGCTTGTCAGCCTTGGGGAAGGTCACTTT +
Preference number: 1 (lower is better)
Translates to: WYMSSPRGVSKAIPL*THQPWLVSLGEGHF
Trigger: AAAGTGACCTTCCCCAAGGCTGACAAGCCAGGGTTGATGAGTGCATAGTGGAATAGCTTTGGATACTCCTCTGGGGGATGACATGTACCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR CCA 90 bp GGAATAGGATTGATTGTATCTGTGAGGCTGGCAACCCCACACACATaGTTCCATGTGAGAACAGACTCGGCAGTGACATCCACTCCAAAT +
Preference number: 1 (lower is better)
Translates to: GIGLIVSVRLATPHT*FHVRTDSAVTSTPN
Trigger: ATTTGGAGTGGATGTCACTGCCGAGTCTGTTCTCACATGGAACCATGTGTGTGGGGTTGCCAGCCTCACAGATACAATCAATCCTATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR GCA 90 bp AAGTACAGAACTGTTTCTAAATTCCCTATCCTTTTCAAACCAACATaGTGGTGGAGAAGGGAGGGTGGGCCACAGGGCTCCAACATCAGA +
Preference number: 1 (lower is better)
Translates to: KYRTVSKFPILFKPT*WWRREGGPQGSNIR
Trigger: TCTGATGTTGGAGCCCTGTGGCCCACCCTCCCTTCTCCACCAGCATGTTGGTTTGAAAAGGATAGGGAATTTAGAAACAGTTCTGTACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR CCA 90 bp CCCAGAGGAGTATCCAAAGCTATTCCACTATGCACTCATCAACCCTaGCTTGTCAGCCTTGGGGAAGGTCACTTTATTCATAAAAATGCC +
Preference number: 1 (lower is better)
Translates to: PRGVSKAIPLCTHQP*LVSLGEGHFIHKNA
Trigger: GGCATTTTTATGAATAAAGTGACCTTCCCCAAGGCTGACAAGCCAGGGTTGATGAGTGCATAGTGGAATAGCTTTGGATACTCCTCTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR TCA 90 bp CTTAGAGGAGAATGCACAGGAGCTGACGAACCACTGGTGTCACTATaGCAATTTGGCATTTTCATCTGGAGTCCATTTAATTTGGGAGGG +
Preference number: 1 (lower is better)
Translates to: LRGECTGADEPLVSL*QFGIFIWSPFNLGG
Trigger: CCCTCCCAAATTAAATGGACTCCAGATGAAAATGCCAAATTGTCATAGTGACACCAGTGGTTCGTCAGCTCCTGTGCATTCTCCTCTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR TCA 90 bp AATATCGTATCTATTCTTAATACCTCCCCTCCGGACCTGACATGGTaGCATGATGCCCTGCGCGATCATCTTACAGTTCTGAATGAGAAG +
Preference number: 1 (lower is better)
Translates to: NIVSILNTSPPDLTW*HDALRDHLTVLNEK
Trigger: CTTCTCATTCAGAACTGTAAGATGATCGCGCAGGGCATCATGTCACCATGTCAGGTCCGGAGGGGAGGTATTAAGAATAGATACGATATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR CCA 90 bp GGAGGTGAGTTCTTAGAGGAGAATGCACAGGAGCTGACGAACCACTaGTGTCACTATGACAATTTGGCATTTTCATCTGGAGTCCATTTA +
Preference number: 1 (lower is better)
Translates to: GGEFLEENAQELTNH*CHYDNLAFSSGVHL
Trigger: TAAATGGACTCCAGATGAAAATGCCAAATTGTCATAGTGACACCAGTGGTTCGTCAGCTCCTGTGCATTCTCCTCTAAGAACTCACCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR GCA 90 bp CGTTTATATAATGTCAGCATTTCAAAACAGCACTCGATGAGTAAGTaGAAAGGAACTGCAAAGCAGGGCAGTACAAGCACAGGACCACAC +
Preference number: 1 (lower is better)
Translates to: RLYNVSISKQHSMSK*KGTAKQGSTSTGPH
Trigger: GTGTGGTCCTGTGCTTGTACTGCCCTGCTTTGCAGTTCCTTTGCACTTACTCATCGAGTGCTGTTTTGAAATGCTGACATTATATAAACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR CCA 90 bp CTCAACCTTTTAGAAGCCTGTTCATTTACATACTCCTATAGGAAATaGTGTAATATCGTATCTATTCTTAATACCTCCCCTCCGGACCTG +
Preference number: 1 (lower is better)
Translates to: LNLLEACSFTYSYRK*CNIVSILNTSPPDL
Trigger: CAGGTCCGGAGGGGAGGTATTAAGAATAGATACGATATTACACCATTTCCTATAGGAGTATGTAAATGAACAGGCTTCTAAAAGGTTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR-3UTR TCA 90 bp TCCGAGCCCCTGCGGTCAAGGAGTGTGGAGCAAAACGTGGGTACTAGGGTGGGACCTGACATGGTGACATaGTGCCCTGCGCGATCATCT +
Preference number: 2 (lower is better)
Translates to: SEPLRSRSVEQNVGTRVGPDMVT*CPARSS
Trigger: AGATGATCGCGCAGGGCATCATGTCACCATGTCAGG...TCCCACCCTAGTACCCACGTTTTGCTCCACACTCCTTGACCGCAGGGGCTCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR-3UTR GCA 90 bp GTGGGAGGCGGGGAAAGGCCACAGCACACTGGCGCTCCAGCAAAGCCAAATCATAGCGCTGGCTGCATCTaGCACTATTCTTCCTTGTCC +
Preference number: 2 (lower is better)
Translates to: VGGGERPQHTGAPAKPNHSAGCI*HYSSLS
Trigger: GGACAAGGAAGAATAGTGGCAGATGCAGCCAGCGCT...ATGATTTGGCTTTGCTGGAGCGCCAGTGTGCTGTGGCCTTTCCCCGCCTCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR-3UTR GCA 90 bp TCCGAGCCCCTGCGGTCAAGGAGTGTGGAGCAAAACGTGGGTACTAGGGTGGGAGTTCTTAGAGGAGAATaGACAGGAGCTGACGAACCA +
Preference number: 2 (lower is better)
Translates to: SEPLRSRSVEQNVGTRVGVLRGE*TGADEP
Trigger: TGGTTCGTCAGCTCCTGTGCATTCTCCTCTAAGAAC...TCCCACCCTAGTACCCACGTTTTGCTCCACACTCCTTGACCGCAGGGGCTCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR-3UTR TCA 90 bp GCGGGGAAAGGCCACAGCACACTGGCGCTCCAGCAAAGCCAAATCATGTCTCCTTTTAGGCCCCCAACCTaGAGTTGTTGCTTAGAATTC +
Preference number: 2 (lower is better)
Translates to: AGKGHSTLALQQSQIMSPFRPPT*SCCLEF
Trigger: GAATTCTAAGCAACAACTTCAGGTTGGGGGCCTAAA...AGGAGACATGATTTGGCTTTGCTGGAGCGCCAGTGTGCTGTGGCCTTTCCCCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR-3UTR GCA 90 bp CCTGGTAATCGACTGGAAACGTCCCCTGTTGGCCATGCTAAGATTCCTTCAACAAGCCCGCTGACACAGTaGGCTAACGGAGGTGAGTTC +
Preference number: 2 (lower is better)
Translates to: PGNRLETSPVGHAKIPSTSPLTQ*ANGGEF
Trigger: GAACTCACCTCCGTTAGCGCACTGTGTCAGCGGGCT...TGTTGAAGGAATCTTAGCATGGCCAACAGGGGACGTTTCCAGTCGATTACCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR-3UTR GCA 90 bp CTTATGTCAGAGGGGAATAGGATTGATTGTATCTGTGAGGCTGGCAACCCCACATTGTGTCCGAGCCCCTaGGGTCAAGGAGTGTGGAGC +
Preference number: 2 (lower is better)
Translates to: LMSEGNRIDCICEAGNPTLCPSP*GQGVWS
Trigger: GCTCCACACTCCTTGACCGCAGGGGCTCGGACACAA...TGTGGGGTTGCCAGCCTCACAGATACAATCAATCCTATTCCCCTCTGACATAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR CAA 90 bp CAGCAAAGCCAAATCATGTCTCCTCTGGCCACTGCGGTCCTCTCCTaGGTACATGTCATCCCCCAGAGGAGTATCCAAAGCTATTCCACT +
Preference number: 2 (lower is better)
Translates to: QQSQIMSPLATAVLS*VHVIPQRSIQSYST
Trigger: AGTGGAATAGCTTTGGATACTCCTCTGGGGGATGACATGTACCAAGGAGAGGACCGCAGTGGCCAGAGGAGACATGATTTGGCTTTGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR-3UTR GCA 90 bp GTGGGAGGCGGGGAAAGGCCACAGCACACTGGCGCTCCAGCAAAGCCAAATCATAGAAGGCATAAATATTaGATAGGAGAGCAAAACCCT +
Preference number: 2 (lower is better)
Translates to: VGGGERPQHTGAPAKPNHRRHKY*IGEQNP
Trigger: AGGGTTTTGCTCTCCTATGCAATATTTATGCCTTCT...ATGATTTGGCTTTGCTGGAGCGCCAGTGTGCTGTGGCCTTTCCCCGCCTCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR CAA 90 bp ACTCTGCCACTCCAGAGGAGTTCCTTATGTCAGAGGGGAATAGGATaGATTGTATCTGTGAGGCTGGCAACCCCACACACATGGTTCCAT +
Preference number: 2 (lower is better)
Translates to: TLPLQRSSLCQRGIG*IVSVRLATPHTWFH
Trigger: ATGGAACCATGTGTGTGGGGTTGCCAGCCTCACAGATACAATCAATCCTATTCCCCTCTGACATAAGGAACTCCTCTGGAGTGGCAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR-3UTR TCA 90 bp CAGGTAAGCCCAGATTACATTTCAACATGTGTACAACTCTCCAGGGCACAATACTTGTCCATAGCCCGCTaGCACAGTGCGCTAACGGAG +
Preference number: 2 (lower is better)
Translates to: QVSPDYISTCVQLSRAQYLSIAR*HSALTE
Trigger: CTCCGTTAGCGCACTGTGTCAGCGGGCTATGGACAA...GTATTGTGCCCTGGAGAGTTGTACACATGTTGAAATGTAATCTGGGCTTACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR-3UTR TCA 90 bp GCGGGGAAAGGCCACAGCACACTGGCGCTCCAGCAAAGCCAAATCATGTCTCCTGTTGTAGCACCATGGTaGTCTGTATTCAAAGAAAAA +
Preference number: 2 (lower is better)
Translates to: AGKGHSTLALQQSQIMSPVVAPW*SVFKEK
Trigger: TTTTTCTTTGAATACAGATCACCATGGTGCTACAAC...AGGAGACATGATTTGGCTTTGCTGGAGCGCCAGTGTGCTGTGGCCTTTCCCCGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR-3UTR TCA 90 bp GCCACAGGGCTCCAACATCAGACCTTGAAAACACCGAGGACAAAATATCGATCAGGCAATGACCACACATaGGTCCTGTATGGAGCAGTG +
Preference number: 2 (lower is better)
Translates to: ATGLQHQTLKTPRTKYRSGNDHT*VLYGAV
Trigger: CACTGCTCCATACAGGACTCATGTGTGGTCATTGCC...TGATCGATATTTTGTCCTCGGTGTTTTCAAGGTCTGATGTTGGAGCCCTGTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR-3UTR GCA 90 bp CATGCTAAGATTCCTTCAACAGGGTCATCCTGCATTTATTCTCCTTCTGCCCCACTAGCCAGCGCTGGCTaGATCTGCCACTATTCTTCC +
Preference number: 2 (lower is better)
Translates to: HAKIPSTGSSCIYSPSAPLASAG*ICHYSS
Trigger: GGAAGAATAGTGGCAGATGCAGCCAGCGCTGGCTAG...TGGGGCAGAAGGAGAATAAATGCAGGATGACCCTGTTGAAGGAATCTTAGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR-3UTR CCA 90 bp CAGGTAAGCCCAGATTACATTTCAACATGTGTACAACTCTCCAGGGCACAATACAGCCCTAGCCAGCGCTaGCTGCATCTGCCACTATTC +
Preference number: 2 (lower is better)
Translates to: QVSPDYISTCVQLSRAQYSPSQR*LHLPLF
Trigger: GAATAGTGGCAGATGCAGCCAGCGCTGGCTAGGGCT...GTATTGTGCCCTGGAGAGTTGTACACATGTTGAAATGTAATCTGGGCTTACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR-3UTR CCA 90 bp CATGCTAAGATTCCTTCAACAGGGTCATCCTGCATTTATTCTCCTTCTGCCCCAAAGGCCACAGCACACTaGCGCTCCAGCAAAGCCAAA +
Preference number: 2 (lower is better)
Translates to: HAKIPSTGSSCIYSPSAPKATAH*RSSKAK
Trigger: TTTGGCTTTGCTGGAGCGCCAGTGTGCTGTGGCCTT...TGGGGCAGAAGGAGAATAAATGCAGGATGACCCTGTTGAAGGAATCTTAGCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR CAA 90 bp CCCCAAGGCTTGCATTTCCTGGTAATCGACTGGAAACGTCCCCTGTaGGCCATGCTAAGATTCCTTCAACAGGGTCATCCTGCATTTATT +
Preference number: 2 (lower is better)
Translates to: PQGLHFLVIDWKRPL*AMLRFLQQGHPAFI
Trigger: AATAAATGCAGGATGACCCTGTTGAAGGAATCTTAGCATGGCCAACAGGGGACGTTTCCAGTCGATTACCAGGAAATGCAAGCCTTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR-3UTR TCA 90 bp CTAAACAGACAGATCCTTATTTCCCTGCTTGATGTTGCAAAGCCCTTGGCAACCAGAATGCACAGGAGCTaGCGAACCACTGGTGTCACT +
Preference number: 2 (lower is better)
Translates to: LNRQILISLLDVAKPLATRMHRS*RTTGVT
Trigger: AGTGACACCAGTGGTTCGTCAGCTCCTGTGCATTCT...GGTTGCCAAGGGCTTTGCAACATCAAGCAGGGAAATAAGGATCTGTCTGTTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR-3UTR TCA 90 bp CTAAACAGACAGATCCTTATTTCCCTGCTTGATGTTGCAAAGCCCTTGGCAACCTTGACTAACTGGGGCTaGGTGGCAGCTATGACTGTC +
Preference number: 2 (lower is better)
Translates to: LNRQILISLLDVAKPLATLTNWG*VAAMTV
Trigger: GACAGTCATAGCTGCCACTCAGCCCCAGTTAGTCAA...GGTTGCCAAGGGCTTTGCAACATCAAGCAGGGAAATAAGGATCTGTCTGTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR-3UTR GCA 90 bp GCGGGGAAAGGCCACAGCACACTGGCGCTCCAGCAAAGCCAAATCATGTCTCCTCAAAAATCTGACATCTaGCAAAACCCAATAACAAGT +
Preference number: 2 (lower is better)
Translates to: AGKGHSTLALQQSQIMSPQKSDI*QNPITS
Trigger: ACTTGTTATTGGGTTTTGGCAGATGTCAGATTTTTG...AGGAGACATGATTTGGCTTTGCTGGAGCGCCAGTGTGCTGTGGCCTTTCCCCGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR-3UTR CCA 90 bp TTGGCCATGCTAAGATTCCTTCAACAGGGTCATCCTGCATTTATTCTCCTTCTGCTGCGGTCCTCTCCTTaGTACATGTCATCCCCCAGA +
Preference number: 2 (lower is better)
Translates to: LAMLRFLQQGHPAFILLLLRSSP*YMSSPR
Trigger: TCTGGGGGATGACATGTACCAAGGAGAGGACCGCAG...CAGAAGGAGAATAAATGCAGGATGACCCTGTTGAAGGAATCTTAGCATGGCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR-3UTR GCA 90 bp CATGCTAAGATTCCTTCAACAGGGTCATCCTGCATTTATTCTCCTTCTGCCCCAGGTGACATGATGCCCTaGGCGATCATCTTACAGTTC +
Preference number: 2 (lower is better)
Translates to: HAKIPSTGSSCIYSPSAPGDMMP*AIILQF
Trigger: GAACTGTAAGATGATCGCGCAGGGCATCATGTCACC...TGGGGCAGAAGGAGAATAAATGCAGGATGACCCTGTTGAAGGAATCTTAGCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR-3UTR TCA 90 bp GGGACTCCATCTTGTTTATCTCCCACAGATAAACACATGTTCCCCCTACGCTTTAGTCCCTTCTTAGGATaGGCAGTTAGGTGGATCTCT +
Preference number: 2 (lower is better)
Translates to: GTPSCLSPTDKHMFPLRFSPFLG*AVRWIS
Trigger: AGAGATCCACCTAACTGCTCATCCTAAGAAGGGACT...AAAGCGTAGGGGGAACATGTGTTTATCTGTGGGAGATAAACAAGATGGAGTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR-3UTR GCA 90 bp GCCACAGGGCTCCAACATCAGACCTTGAAAACACCGAGGACAAAATATCGATCACATTTATTCTCCTTCTaGCCCACCCCCACAATGAAA +
Preference number: 2 (lower is better)
Translates to: ATGLQHQTLKTPRTKYRSHLFSF*PTPTMK
Trigger: TTTCATTGTGGGGGTGGGGCAGAAGGAGAATAAATG...TGATCGATATTTTGTCCTCGGTGTTTTCAAGGTCTGATGTTGGAGCCCTGTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR-3UTR CCA 90 bp AAGTCTTTGGGACTCCATCTTGTTTATCTCCCACAGATAAACACATGTTCCCCCTGCGGTCAAGGAGTGTaGAGCAAAACGTGGGTACTA +
Preference number: 2 (lower is better)
Translates to: KSLGLHLVYLPQINTCSPCGQGV*SKTWVL
Trigger: TAGTACCCACGTTTTGCTCCACACTCCTTGACCGCA...GGGGGAACATGTGTTTATCTGTGGGAGATAAACAAGATGGAGTCCCAAAGACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR-3UTR CCA 90 bp CTAAACAGACAGATCCTTATTTCCCTGCTTGATGTTGCAAAGCCCTTGGCAACCGAGCTGACGAACCACTaGTGTCACTATGACAATTTG +
Preference number: 2 (lower is better)
Translates to: LNRQILISLLDVAKPLATELTNH*CHYDNL
Trigger: CAAATTGTCATAGTGACACCAGTGGTTCGTCAGCTC...GGTTGCCAAGGGCTTTGCAACATCAAGCAGGGAAATAAGGATCTGTCTGTTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR-3UTR CCA 90 bp GCATTAGCTATGATTTCATCACTTACAGGTAGAGAAGCTTACTGTCTACTGGTGTGCACTCATCAACCCTaGCTTGTCAGCCTTGGGGAA +
Preference number: 2 (lower is better)
Translates to: ALAMISSLTGREAYCLLVCTHQP*LVSLGE
Trigger: TTCCCCAAGGCTGACAAGCCAGGGTTGATGAGTGCA...CACCAGTAGACAGTAAGCTTCTCTACCTGTAAGTGATGAAATCATAGCTAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR CAA 90 bp GAGGAGTATCCAAAGCTATTCCACTATGCACTCATCAACCCTGGCTaGTCAGCCTTGGGGAAGGTCACTTTATTCATAAAAATGCCTCTT +
Preference number: 2 (lower is better)
Translates to: EEYPKLFHYALINPG*SALGKVTLFIKMPL
Trigger: AAGAGGCATTTTTATGAATAAAGTGACCTTCCCCAAGGCTGACAAGCCAGGGTTGATGAGTGCATAGTGGAATAGCTTTGGATACTCCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR-3UTR CCA 90 bp AAAGCTTCTAAAAGTTGCATCAACATCCTCCTAAGCCCCCAGAGGATTGTAACACTACCCAAATCCCACTaGACCAACAAGCCTGTAACT +
Preference number: 2 (lower is better)
Translates to: KASKSCINILLSPQRIVTLPKSH*TNKPVT
Trigger: AGTTACAGGCTTGTTGGTCCAGTGGGATTTGGGTAG...TGTTACAATCCTCTGGGGGCTTAGGAGGATGTTGATGCAACTTTTAGAAGCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR-3UTR CCA 90 bp GCCACAGGGCTCCAACATCAGACCTTGAAAACACCGAGGACAAAATATCGATCAAGCCATGGTACACATTaGATGTTTCAAAGCCTCAAT +
Preference number: 2 (lower is better)
Translates to: ATGLQHQTLKTPRTKYRSSHGTH*MFQSLN
Trigger: ATTGAGGCTTTGAAACATCCAATGTGTACCATGGCT...TGATCGATATTTTGTCCTCGGTGTTTTCAAGGTCTGATGTTGGAGCCCTGTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR-3UTR GCA 90 bp AAGTCTTTGGGACTCCATCTTGTTTATCTCCCACAGATAAACACATGTTCCCCCAAAGCTATTCCACTATaGACTCATCAACCCTGGCTT +
Preference number: 2 (lower is better)
Translates to: KSLGLHLVYLPQINTCSPKAIPL*THQPWL
Trigger: AAGCCAGGGTTGATGAGTGCATAGTGGAATAGCTTT...GGGGGAACATGTGTTTATCTGTGGGAGATAAACAAGATGGAGTCCCAAAGACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR-3UTR CCA 90 bp GCATTAGCTATGATTTCATCACTTACAGGTAGAGAAGCTTACTGTCTACTGGTGCTGGCTTGTCAGCCTTaGGGAAGGTCACTTTATTCA +
Preference number: 2 (lower is better)
Translates to: ALAMISSLTGREAYCLLVLACQP*GRSLYS
Trigger: TGAATAAAGTGACCTTCCCCAAGGCTGACAAGCCAG...CACCAGTAGACAGTAAGCTTCTCTACCTGTAAGTGATGAAATCATAGCTAATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR-3UTR GCA 90 bp AAAGCTTCTAAAAGTTGCATCAACATCCTCCTAAGCCCCCAGAGGATTGTAACACTCTGTTTTCACACCTaGTCTGTATTAGCATTCCAC +
Preference number: 2 (lower is better)
Translates to: KASKSCINILLSPQRIVTLCFHT*SVLAFH
Trigger: GTGGAATGCTAATACAGAGCAGGTGTGAAAACAGAG...TGTTACAATCCTCTGGGGGCTTAGGAGGATGTTGATGCAACTTTTAGAAGCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR-3UTR TCA 90 bp ACTCCTATAGGAAATGGTGTAATATCGTATCTATTCTTAATACCTCCCCTCCGGCCACTGGTGTCACTATaGCAATTTGGCATTTTCATC +
Preference number: 2 (lower is better)
Translates to: TPIGNGVISYLFLIPPLRPLVSL*QFGIFI
Trigger: GATGAAAATGCCAAATTGTCATAGTGACACCAGTGG...CCGGAGGGGAGGTATTAAGAATAGATACGATATTACACCATTTCCTATAGGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR-3UTR CCA 90 bp CATGCTAAGATTCCTTCAACAGGGTCATCCTGCATTTATTCTCCTTCTGCCCCATTTGGCATTTTCATCTaGAGTCCATTTAATTTGGGA +
Preference number: 2 (lower is better)
Translates to: HAKIPSTGSSCIYSPSAPFGIFI*SPFNLG
Trigger: TCCCAAATTAAATGGACTCCAGATGAAAATGCCAAA...TGGGGCAGAAGGAGAATAAATGCAGGATGACCCTGTTGAAGGAATCTTAGCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR CAA 90 bp TCACTTACAGGTAGAGAAGCTTACTGTCTACTGGTGTGGACACTCTaGCTATTTTCTTTATACTTAATTTGCAGTGGCAGAATGGTGAAG +
Preference number: 2 (lower is better)
Translates to: SLTGREAYCLLVWTL*LFSLYLICSGRMVK
Trigger: CTTCACCATTCTGCCACTGCAAATTAAGTATAAAGAAAATAGCAAGAGTGTCCACACCAGTAGACAGTAAGCTTCTCTACCTGTAAGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR-3UTR CCA 90 bp CAGGTAAGCCCAGATTACATTTCAACATGTGTACAACTCTCCAGGGCACAATACTCCTTGTCTAGGCTTTaGATTTTAAAGTTCATGACA +
Preference number: 2 (lower is better)
Translates to: QVSPDYISTCVQLSRAQYSLSRL*ILKFMT
Trigger: TGTCATGAACTTTAAAATCCAAAGCCTAGACAAGGA...GTATTGTGCCCTGGAGAGTTGTACACATGTTGAAATGTAATCTGGGCTTACCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR-3UTR CCA 90 bp ACCTGGTCTATTAAAGGATACACGGTATCCACTAAACAGACAGATCCTTATTTCTACTGTCTACTGGTGTaGACACTCTTGCTATTTTCT +
Preference number: 2 (lower is better)
Translates to: TWSIKGYTVSTKQTDPYFYCLLV*TLLLFS
Trigger: AGAAAATAGCAAGAGTGTCCACACCAGTAGACAGTA...GAAATAAGGATCTGTCTGTTTAGTGGATACCGTGTATCCTTTAATAGACCAGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR CCA 72 bp GGTCAAGGAGTGTGGAGCAAAACGTGGGTACTAGGGTaGGAGGCGGGGAAAGGCCACAGCACACTGGCGCTC +
Preference number: 3 (lower is better)
Translates to: GQGVWSKTWVLG*EAGKGHSTLAL
Trigger: GAGCGCCAGTGTGCTGTGGCCTTTCCCCGCCTCCCACCCTAGTACCCACGTTTTGCTCCACACTCCTTGACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR GCA 72 bp GCTCCAGCAAAGCCAAATCATGTCTCCTCTGGCCACTaGGGTCCTCTCCTTGGTACATGTCATCCCCCAGAG +
Preference number: 3 (lower is better)
Translates to: APAKPNHVSSGH*GPLLGTCHPPE
Trigger: CTCTGGGGGATGACATGTACCAAGGAGAGGACCGCAGTGGCCAGAGGAGACATGATTTGGCTTTGCTGGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR CCA 72 bp CACTGGCGCTCCAGCAAAGCCAAATCATGTCTCCTCTaGCCACTGCGGTCCTCTCCTTGGTACATGTCATCC +
Preference number: 3 (lower is better)
Translates to: HWRSSKAKSCLL*PLRSSPWYMSS
Trigger: GGATGACATGTACCAAGGAGAGGACCGCAGTGGCCAGAGGAGACATGATTTGGCTTTGCTGGAGCGCCAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR CCA 72 bp AAATCATGTCTCCTCTGGCCACTGCGGTCCTCTCCTTaGTACATGTCATCCCCCAGAGGAGTATCCAAAGCT +
Preference number: 3 (lower is better)
Translates to: KSCLLWPLRSSP*YMSSPRGVSKA
Trigger: AGCTTTGGATACTCCTCTGGGGGATGACATGTACCAAGGAGAGGACCGCAGTGGCCAGAGGAGACATGATTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR-3UTR CAA 90 bp CATGCTAAGATTCCTTCAACAGGGTCATCCTGCATTTATTCTCCTTCTGCCCCACTCATCAACCCTGGCTaGTCAGCCTTGGGGAAGGTC +
Preference number: 3 (lower is better)
Translates to: HAKIPSTGSSCIYSPSAPLINPG*SALGKV
Trigger: GACCTTCCCCAAGGCTGACAAGCCAGGGTTGATGAG...TGGGGCAGAAGGAGAATAAATGCAGGATGACCCTGTTGAAGGAATCTTAGCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR GCA 72 bp TCATCCCCCAGAGGAGTATCCAAAGCTATTCCACTATaGACTCATCAACCCTGGCTTGTCAGCCTTGGGGAA +
Preference number: 3 (lower is better)
Translates to: SSPRGVSKAIPL*THQPWLVSLGE
Trigger: TTCCCCAAGGCTGACAAGCCAGGGTTGATGAGTGCATAGTGGAATAGCTTTGGATACTCCTCTGGGGGATGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR CCA 72 bp GTTTCTAAATTCCCTATCCTTTTCAAACCAACATGCTaGTGGAGAAGGGAGGGTGGGCCACAGGGCTCCAAC +
Preference number: 3 (lower is better)
Translates to: VSKFPILFKPTC*WRREGGPQGSN
Trigger: GTTGGAGCCCTGTGGCCCACCCTCCCTTCTCCACCAGCATGTTGGTTTGAAAAGGATAGGGAATTTAGAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR-3UTR CAA 90 bp ACCTGGTCTATTAAAGGATACACGGTATCCACTAAACAGACAGATCCTTATTTCCCTGGTGACAGGGGTTaGTGTCCGAGCCCCTGCGGT +
Preference number: 3 (lower is better)
Translates to: TWSIKGYTVSTKQTDPYFPGDRG*CPSPCG
Trigger: ACCGCAGGGGCTCGGACACAAACCCCTGTCACCAGG...GAAATAAGGATCTGTCTGTTTAGTGGATACCGTGTATCCTTTAATAGACCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR TCA 72 bp TCTATTCTTAATACCTCCCCTCCGGACCTGACATGGTaGCATGATGCCCTGCGCGATCATCTTACAGTTCTG +
Preference number: 3 (lower is better)
Translates to: SILNTSPPDLTW*HDALRDHLTVL
Trigger: CAGAACTGTAAGATGATCGCGCAGGGCATCATGTCACCATGTCAGGTCCGGAGGGGAGGTATTAAGAATAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR CCA 72 bp TTCACACCCAGACGCACACACAATGAGTGGCTTCAATaGGGTGTCAAGAGTAAGCATGGAGAGCGGATTTTG +
Preference number: 3 (lower is better)
Translates to: FTPRRTHNEWLQ*GVKSKHGERIL
Trigger: CAAAATCCGCTCTCCATGCTTACTCTTGACACCCCATTGAAGCCACTCATTGTGTGTGCGTCTGGGTGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR-3UTR CAA 90 bp GCCACAGGGCTCCAACATCAGACCTTGAAAACACCGAGGACAAAATATCGATCATGGAGTCCATTTAATTaGGGAGGGGTGAGAGAAGCC +
Preference number: 3 (lower is better)
Translates to: ATGLQHQTLKTPRTKYRSWSPFN*GGVREA
Trigger: GGCTTCTCTCACCCCTCCCAAATTAAATGGACTCCA...TGATCGATATTTTGTCCTCGGTGTTTTCAAGGTCTGATGTTGGAGCCCTGTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR TCA 72 bp TCCCAAGATGATGGAGTCATAAGATTGGGTGGGCAATaGCCACACATGAGTCCTGTATGGAGCAGTGTCTCA +
Preference number: 3 (lower is better)
Translates to: SQDDGVIRLGGQ*PHMSPVWSSVS
Trigger: TGAGACACTGCTCCATACAGGACTCATGTGTGGTCATTGCCCACCCAATCTTATGACTCCATCATCTTGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR TCA 72 bp AATGGGGTGTCAAGAGTAAGCATGGAGAGCGGATTTTaGCTCATGGGTAACCTCCGACATGCCAGCATCTAT +
Preference number: 3 (lower is better)
Translates to: NGVSRVSMESGF*LMGNLRHASIY
Trigger: ATAGATGCTGGCATGTCGGAGGTTACCCATGAGTCAAAATCCGCTCTCCATGCTTACTCTTGACACCCCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR-3UTR CAA 90 bp GCCACAGGGCTCCAACATCAGACCTTGAAAACACCGAGGACAAAATATCGATCAAAGGCATGGTTTCTGTaGACATGTCGTGCAAAGCCA +
Preference number: 3 (lower is better)
Translates to: ATGLQHQTLKTPRTKYRSKAWFL*TCRAKP
Trigger: TGGCTTTGCACGACATGTCAACAGAAACCATGCCTT...TGATCGATATTTTGTCCTCGGTGTTTTCAAGGTCTGATGTTGGAGCCCTGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR TCA 72 bp ATCTGCCAAAACCCAATAACAAGTCCCTTCTTAGGATaGGCAGTTAGGTGGATCTCTGGTGTTCCAAGACCC +
Preference number: 3 (lower is better)
Translates to: ICQNPITSPFLG*AVRWISGVPRP
Trigger: GGGTCTTGGAACACCAGAGATCCACCTAACTGCTCATCCTAAGAAGGGACTTGTTATTGGGTTTTGGCAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR TCA 72 bp ATATCGTATCTATTCTTAATACCTCCCCTCCGGACCTaGCATGGTGACATGATGCCCTGCGCGATCATCTTA +
Preference number: 3 (lower is better)
Translates to: ISYLFLIPPLRT*HGDMMPCAIIL
Trigger: TAAGATGATCGCGCAGGGCATCATGTCACCATGTCAGGTCCGGAGGGGAGGTATTAAGAATAGATACGATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR-3UTR CAA 90 bp CTAAACAGACAGATCCTTATTTCCCTGCTTGATGTTGCAAAGCCCTTGGCAACCCTGACACCAATCATCTaGAAAACTCCATGGCAAGTG +
Preference number: 3 (lower is better)
Translates to: LNRQILISLLDVAKPLATLTPII*KTPWQV
Trigger: CACTTGCCATGGAGTTTTCAAGATGATTGGTGTCAG...GGTTGCCAAGGGCTTTGCAACATCAAGCAGGGAAATAAGGATCTGTCTGTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR-3UTR CAA 90 bp ACCTGGTCTATTAAAGGATACACGGTATCCACTAAACAGACAGATCCTTATTTCGATGTTGCAAAGCCCTaGGCAACCAGGGGCAAAGGT +
Preference number: 3 (lower is better)
Translates to: TWSIKGYTVSTKQTDPYFDVAKP*ATRGKG
Trigger: ACCTTTGCCCCTGGTTGCCAAGGGCTTTGCAACATC...GAAATAAGGATCTGTCTGTTTAGTGGATACCGTGTATCCTTTAATAGACCAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR CCA 72 bp GTATCCAAAGCTATTCCACTATGCACTCATCAACCCTaGCTTGTCAGCCTTGGGGAAGGTCACTTTATTCAT +
Preference number: 3 (lower is better)
Translates to: VSKAIPLCTHQP*LVSLGEGHFIH
Trigger: ATGAATAAAGTGACCTTCCCCAAGGCTGACAAGCCAGGGTTGATGAGTGCATAGTGGAATAGCTTTGGATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR CCA 72 bp TCCGACATGCCAGCATCTATTAAACTGTACAGACAATaGGAGCAAGCCCATTGTAGGGAGATTTGTCTCACA +
Preference number: 3 (lower is better)
Translates to: SDMPASIKLYRQ*EQAHCREICLT
Trigger: TGTGAGACAAATCTCCCTACAATGGGCTTGCTCCCATTGTCTGTACAGTTTAATAGATGCTGGCATGTCGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR-3UTR CAA 90 bp GCATTAGCTATGATTTCATCACTTACAGGTAGAGAAGCTTACTGTCTACTGGTGGCCCCCAACCTGAAGTaGTTGCTTAGAATTCAGGCT +
Preference number: 3 (lower is better)
Translates to: ALAMISSLTGREAYCLLVAPNLK*LLRIQA
Trigger: AGCCTGAATTCTAAGCAACAACTTCAGGTTGGGGGC...CACCAGTAGACAGTAAGCTTCTCTACCTGTAAGTGATGAAATCATAGCTAATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR TCA 72 bp GGTGACATGATGCCCTGCGCGATCATCTTACAGTTCTaGATGAGAAGGCATAAATATTGCATAGGAGAGCAA +
Preference number: 3 (lower is better)
Translates to: GDMMPCAIILQF*MRRHKYCIGEQ
Trigger: TTGCTCTCCTATGCAATATTTATGCCTTCTCATTCAGAACTGTAAGATGATCGCGCAGGGCATCATGTCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR CCA 72 bp TTCTTAGAGGAGAATGCACAGGAGCTGACGAACCACTaGTGTCACTATGACAATTTGGCATTTTCATCTGGA +
Preference number: 3 (lower is better)
Translates to: FLEENAQELTNH*CHYDNLAFSSG
Trigger: TCCAGATGAAAATGCCAAATTGTCATAGTGACACCAGTGGTTCGTCAGCTCCTGTGCATTCTCCTCTAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR TCA 72 bp GAATGCACAGGAGCTGACGAACCACTGGTGTCACTATaGCAATTTGGCATTTTCATCTGGAGTCCATTTAAT +
Preference number: 3 (lower is better)
Translates to: ECTGADEPLVSL*QFGIFIWSPFN
Trigger: ATTAAATGGACTCCAGATGAAAATGCCAAATTGTCATAGTGACACCAGTGGTTCGTCAGCTCCTGTGCATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR-3UTR CAA 90 bp GCATTAGCTATGATTTCATCACTTACAGGTAGAGAAGCTTACTGTCTACTGGTGCCCAACCTGAAGTTGTaGCTTAGAATTCAGGCTGAA +
Preference number: 3 (lower is better)
Translates to: ALAMISSLTGREAYCLLVPNLKL*LRIQAE
Trigger: TTCAGCCTGAATTCTAAGCAACAACTTCAGGTTGGG...CACCAGTAGACAGTAAGCTTCTCTACCTGTAAGTGATGAAATCATAGCTAATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR-3UTR CAA 90 bp AAAGCTTCTAAAAGTTGCATCAACATCCTCCTAAGCCCCCAGAGGATTGTAACATGTCACTATGACAATTaGGCATTTTCATCTGGAGTC +
Preference number: 3 (lower is better)
Translates to: KASKSCINILLSPQRIVTCHYDN*AFSSGV
Trigger: GACTCCAGATGAAAATGCCAAATTGTCATAGTGACA...TGTTACAATCCTCTGGGGGCTTAGGAGGATGTTGATGCAACTTTTAGAAGCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR CCA 72 bp TTAGAAGCCTGTTCATTTACATACTCCTATAGGAAATaGTGTAATATCGTATCTATTCTTAATACCTCCCCT +
Preference number: 3 (lower is better)
Translates to: LEACSFTYSYRK*CNIVSILNTSP
Trigger: AGGGGAGGTATTAAGAATAGATACGATATTACACCATTTCCTATAGGAGTATGTAAATGAACAGGCTTCTAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR CCA 90 bp TGTCTCCTCTGGCCACTGCGGTCCTCTCCTTGGTACATGTCATCCCCCAGAGGAAAGCGTGCGTGTGTGTaGTGGCGGCGGCGAGGGCGG +
Preference number: 4 (lower is better)
Translates to: CLLWPLRSSPWYMSSPRGKRACV*WRRRGR
Trigger: CCGCCCTCGCCGCCGCCACCACACACACGCACGCTT...TCCTCTGGGGGATGACATGTACCAAGGAGAGGACCGCAGTGGCCAGAGGAGACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR TCA 90 bp TGTCTCCTCTGGCCACTGCGGTCCTCTCCTTGGTACATGTCATCCCCCAGAGGAGCGGGATGGCTCGGCTaGCTCATGTACGGTGTCATC +
Preference number: 4 (lower is better)
Translates to: CLLWPLRSSPWYMSSPRGAGWLG*LMYGVI
Trigger: GATGACACCGTACATGAGTCAGCCGAGCCATCCCGC...TCCTCTGGGGGATGACATGTACCAAGGAGAGGACCGCAGTGGCCAGAGGAGACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR CCA 90 bp TCCGAGCCCCTGCGGTCAAGGAGTGTGGAGCAAAACGTGGGTACTAGGGTGGGAAGCCCTAGCCAGCGCTaGCTGCATCTGCCACTATTC +
Preference number: 4 (lower is better)
Translates to: SEPLRSRSVEQNVGTRVGSPSQR*LHLPLF
Trigger: GAATAGTGGCAGATGCAGCCAGCGCTGGCTAGGGCT...TCCCACCCTAGTACCCACGTTTTGCTCCACACTCCTTGACCGCAGGGGCTCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR CCA 90 bp GCGGGGAAAGGCCACAGCACACTGGCGCTCCAGCAAAGCCAAATCATGTCTCCTGTGGAGAAGGGAGGGTaGGCCACAGGGCTCCAACAT +
Preference number: 4 (lower is better)
Translates to: AGKGHSTLALQQSQIMSPVEKGG*ATGLQH
Trigger: ATGTTGGAGCCCTGTGGCCCACCCTCCCTTCTCCAC...AGGAGACATGATTTGGCTTTGCTGGAGCGCCAGTGTGCTGTGGCCTTTCCCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR CAA 72 bp CAAGTAGTGCTGACTGACTCTCCTGGTGACAGGGGTTaGTGTCCGAGCCCCTGCGGTCAAGGAGTGTGGAGC +
Preference number: 4 (lower is better)
Translates to: QVVLTDSPGDRG*CPSPCGQGVWS
Trigger: GCTCCACACTCCTTGACCGCAGGGGCTCGGACACAAACCCCTGTCACCAGGAGAGTCAGTCAGCACTACTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR TCA 90 bp GAAAGGCCACAGCACACTGGCGCTCCAGCAAAGCCAAATCATGTCTCCTCTGGCTTGTCCATAGCCCGCTaGCACAGTGCGCTAACGGAG +
Preference number: 4 (lower is better)
Translates to: ERPQHTGAPAKPNHVSSGLSIAR*HSALTE
Trigger: CTCCGTTAGCGCACTGTGTCAGCGGGCTATGGACAA...GCCAGAGGAGACATGATTTGGCTTTGCTGGAGCGCCAGTGTGCTGTGGCCTTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR CCA 90 bp GCGGGGAAAGGCCACAGCACACTGGCGCTCCAGCAAAGCCAAATCATGTCTCCTAAGGCCACAGCACACTaGCGCTCCAGCAAAGCCAAA +
Preference number: 4 (lower is better)
Translates to: AGKGHSTLALQQSQIMSPKATAH*RSSKAK
Trigger: TTTGGCTTTGCTGGAGCGCCAGTGTGCTGTGGCCTT...AGGAGACATGATTTGGCTTTGCTGGAGCGCCAGTGTGCTGTGGCCTTTCCCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR TCA 90 bp GCTCCAGCAAAGCCAAATCATGTCTCCTCTGGCCACTGCGGTCCTCTCCTTGGTAAGGTCACTGGGGTTTaGCTAACTGGGGCTGAGTGG +
Preference number: 4 (lower is better)
Translates to: APAKPNHVSSGHCGPLLGKVTGV*LTGAEW
Trigger: CCACTCAGCCCCAGTTAGTCAAACCCCAGTGACCTT...ACCAAGGAGAGGACCGCAGTGGCCAGAGGAGACATGATTTGGCTTTGCTGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR GCA 90 bp TGTCTCCTCTGGCCACTGCGGTCCTCTCCTTGGTACATGTCATCCCCCAGAGGAAGCGCTGGCTGCATCTaGCACTATTCTTCCTTGTCC +
Preference number: 4 (lower is better)
Translates to: CLLWPLRSSPWYMSSPRGSAGCI*HYSSLS
Trigger: GGACAAGGAAGAATAGTGGCAGATGCAGCCAGCGCT...TCCTCTGGGGGATGACATGTACCAAGGAGAGGACCGCAGTGGCCAGAGGAGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR CCA 90 bp GCGGGGAAAGGCCACAGCACACTGGCGCTCCAGCAAAGCCAAATCATGTCTCCTAACTCGCACCCCCACTaGAGGGTTCAGGAGGAAAAA +
Preference number: 4 (lower is better)
Translates to: AGKGHSTLALQQSQIMSPNSHPH*RVQEEK
Trigger: TTTTTCCTCCTGAACCCTCCAGTGGGGGTGCGAGTT...AGGAGACATGATTTGGCTTTGCTGGAGCGCCAGTGTGCTGTGGCCTTTCCCCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR TCA 90 bp TTTGTGTCCGAGCCCCTGCGGTCAAGGAGTGTGGAGCAAAACGTGGGTACTAGGGGTCCATTTGGAGAGTaGGGCCGGTTACATTCCCAT +
Preference number: 4 (lower is better)
Translates to: FVSEPLRSRSVEQNVGTRGPFGE*GRLHSH
Trigger: ATGGGAATGTAACCGGCCTCACTCTCCAAATGGACC...CCTAGTACCCACGTTTTGCTCCACACTCCTTGACCGCAGGGGCTCGGACACAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR TCA 90 bp GTGGGAGGCGGGGAAAGGCCACAGCACACTGGCGCTCCAGCAAAGCCAAATCATAGTCCCTTCTTAGGATaGGCAGTTAGGTGGATCTCT +
Preference number: 4 (lower is better)
Translates to: VGGGERPQHTGAPAKPNHSPFLG*AVRWIS
Trigger: AGAGATCCACCTAACTGCTCATCCTAAGAAGGGACT...ATGATTTGGCTTTGCTGGAGCGCCAGTGTGCTGTGGCCTTTCCCCGCCTCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR TCA 90 bp TTTGTGTCCGAGCCCCTGCGGTCAAGGAGTGTGGAGCAAAACGTGGGTACTAGGAGAATGCACAGGAGCTaGCGAACCACTGGTGTCACT +
Preference number: 4 (lower is better)
Translates to: FVSEPLRSRSVEQNVGTRRMHRS*RTTGVT
Trigger: AGTGACACCAGTGGTTCGTCAGCTCCTGTGCATTCT...CCTAGTACCCACGTTTTGCTCCACACTCCTTGACCGCAGGGGCTCGGACACAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR TCA 90 bp GTGGGAGGCGGGGAAAGGCCACAGCACACTGGCGCTCCAGCAAAGCCAAATCATGCTGAGTGGCAGCTATaGCTGTCCTTCAGATTTTTG +
Preference number: 4 (lower is better)
Translates to: VGGGERPQHTGAPAKPNHAEWQL*LSFRFL
Trigger: CAAAAATCTGAAGGACAGTCATAGCTGCCACTCAGC...ATGATTTGGCTTTGCTGGAGCGCCAGTGTGCTGTGGCCTTTCCCCGCCTCCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR TCA 90 bp GCGGGGAAAGGCCACAGCACACTGGCGCTCCAGCAAAGCCAAATCATGTCTCCTAGATTGGGTGGGCAATaGCCACACATGAGTCCTGTA +
Preference number: 4 (lower is better)
Translates to: AGKGHSTLALQQSQIMSPRLGGQ*PHMSPV
Trigger: TACAGGACTCATGTGTGGTCATTGCCCACCCAATCT...AGGAGACATGATTTGGCTTTGCTGGAGCGCCAGTGTGCTGTGGCCTTTCCCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR TCA 90 bp GCTCCAGCAAAGCCAAATCATGTCTCCTCTGGCCACTGCGGTCCTCTCCTTGGTGCCCATTCACAGCTCTaGGGGGAAATAAAACGTGGG +
Preference number: 4 (lower is better)
Translates to: APAKPNHVSSGHCGPLLGAHSQL*GEIKRG
Trigger: CCCACGTTTTATTTCCCCTCAGAGCTGTGAATGGGC...ACCAAGGAGAGGACCGCAGTGGCCAGAGGAGACATGATTTGGCTTTGCTGGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR TCA 90 bp TCCGAGCCCCTGCGGTCAAGGAGTGTGGAGCAAAACGTGGGTACTAGGGTGGGAGTCTCACAAAGACTTTaGGCTTTAGACAGGACCTTC +
Preference number: 4 (lower is better)
Translates to: SEPLRSRSVEQNVGTRVGVSQRL*ALDRTF
Trigger: GAAGGTCCTGTCTAAAGCTCAAAGTCTTTGTGAGAC...TCCCACCCTAGTACCCACGTTTTGCTCCACACTCCTTGACCGCAGGGGCTCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR GCA 90 bp GAAAGGCCACAGCACACTGGCGCTCCAGCAAAGCCAAATCATGTCTCCTCTGGCGGTGACATGATGCCCTaGGCGATCATCTTACAGTTC +
Preference number: 4 (lower is better)
Translates to: ERPQHTGAPAKPNHVSSGGDMMP*AIILQF
Trigger: GAACTGTAAGATGATCGCGCAGGGCATCATGTCACC...GCCAGAGGAGACATGATTTGGCTTTGCTGGAGCGCCAGTGTGCTGTGGCCTTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR GCA 90 bp GCGGGGAAAGGCCACAGCACACTGGCGCTCCAGCAAAGCCAAATCATGTCTCCTCTTTTCAAACCAACATaGTGGTGGAGAAGGGAGGGT +
Preference number: 4 (lower is better)
Translates to: AGKGHSTLALQQSQIMSPLFKPT*WWRREG
Trigger: ACCCTCCCTTCTCCACCAGCATGTTGGTTTGAAAAG...AGGAGACATGATTTGGCTTTGCTGGAGCGCCAGTGTGCTGTGGCCTTTCCCCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR CCA 90 bp GAAAGGCCACAGCACACTGGCGCTCCAGCAAAGCCAAATCATGTCTCCTCTGGCAAGAAGGCGGTGGGATaGGGGGTGATAAAGACAAAC +
Preference number: 4 (lower is better)
Translates to: ERPQHTGAPAKPNHVSSGKKAVG*GVIKTN
Trigger: GTTTGTCTTTATCACCCCCCATCCCACCGCCTTCTT...GCCAGAGGAGACATGATTTGGCTTTGCTGGAGCGCCAGTGTGCTGTGGCCTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR CCA 90 bp AAAGCTTCTAAAAGTTGCATCAACATCCTCCTAAGCCCCCAGAGGATTGTAACAGTGCAACATCACGCCTaGCCAGCGGCGGAGCCCCCG +
Preference number: 4 (lower is better)
Translates to: KASKSCINILLSPQRIVTVQHHA*PAAEPP
Trigger: CGGGGGCTCCGCCGCTGGCCAGGCGTGATGTTGCAC...TGTTACAATCCTCTGGGGGCTTAGGAGGATGTTGATGCAACTTTTAGAAGCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR CAA 72 bp CAAATCATGTCTCCTCTGGCCACTGCGGTCCTCTCCTaGGTACATGTCATCCCCCAGAGGAGTATCCAAAGC +
Preference number: 4 (lower is better)
Translates to: QIMSPLATAVLS*VHVIPQRSIQS
Trigger: GCTTTGGATACTCCTCTGGGGGATGACATGTACCAAGGAGAGGACCGCAGTGGCCAGAGGAGACATGATTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR TCA 90 bp GAAAGGCCACAGCACACTGGCGCTCCAGCAAAGCCAAATCATGTCTCCTCTGGCGTTTTCTGTGACAAGTaGTGGGAGGAGACTGTGCTA +
Preference number: 4 (lower is better)
Translates to: ERPQHTGAPAKPNHVSSGVFCDK*WEETVL
Trigger: TAGCACAGTCTCCTCCCATCACTTGTCACAGAAAAC...GCCAGAGGAGACATGATTTGGCTTTGCTGGAGCGCCAGTGTGCTGTGGCCTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR TCA 90 bp GTGGGAGGCGGGGAAAGGCCACAGCACACTGGCGCTCCAGCAAAGCCAAATCATCCACTGGTGTCACTATaGCAATTTGGCATTTTCATC +
Preference number: 4 (lower is better)
Translates to: VGGGERPQHTGAPAKPNHPLVSL*QFGIFI
Trigger: GATGAAAATGCCAAATTGTCATAGTGACACCAGTGG...ATGATTTGGCTTTGCTGGAGCGCCAGTGTGCTGTGGCCTTTCCCCGCCTCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR CCA 90 bp CATGCTAAGATTCCTTCAACAGGGTCATCCTGCATTTATTCTCCTTCTGCCCCAACGTGGGTACTAGGGTaGGAGGCGGGGAAAGGCCAC +
Preference number: 4 (lower is better)
Translates to: HAKIPSTGSSCIYSPSAPTWVLG*EAGKGH
Trigger: GTGGCCTTTCCCCGCCTCCCACCCTAGTACCCACGT...TGGGGCAGAAGGAGAATAAATGCAGGATGACCCTGTTGAAGGAATCTTAGCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR TCA 90 bp GCTCCAGCAAAGCCAAATCATGTCTCCTCTGGCCACTGCGGTCCTCTCCTTGGTTACATTCCCATCTCTTaGACCCTTTGGAAGTGTGGT +
Preference number: 4 (lower is better)
Translates to: APAKPNHVSSGHCGPLLGYIPIS*TLWKCG
Trigger: ACCACACTTCCAAAGGGTTCAAGAGATGGGAATGTA...ACCAAGGAGAGGACCGCAGTGGCCAGAGGAGACATGATTTGGCTTTGCTGGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR TCA 90 bp TTTGTGTCCGAGCCCCTGCGGTCAAGGAGTGTGGAGCAAAACGTGGGTACTAGGATTCTCGGCCTGGCCTaGATTCAAATCCTAGAGAAA +
Preference number: 4 (lower is better)
Translates to: FVSEPLRSRSVEQNVGTRILGLA*IQILEK
Trigger: TTTCTCTAGGATTTGAATTCAGGCCAGGCCGAGAAT...CCTAGTACCCACGTTTTGCTCCACACTCCTTGACCGCAGGGGCTCGGACACAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR TCA 90 bp CATGCTAAGATTCCTTCAACAGGGTCATCCTGCATTTATTCTCCTTCTGCCCCACCGGACCTGACATGGTaGCATGATGCCCTGCGCGAT +
Preference number: 4 (lower is better)
Translates to: HAKIPSTGSSCIYSPSAPPDLTW*HDALRD
Trigger: ATCGCGCAGGGCATCATGTCACCATGTCAGGTCCGG...TGGGGCAGAAGGAGAATAAATGCAGGATGACCCTGTTGAAGGAATCTTAGCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR TCA 90 bp TCCGAGCCCCTGCGGTCAAGGAGTGTGGAGCAAAACGTGGGTACTAGGGTGGGATTAAGCTTCCTACACTaGTTGGTTTGCAACCATTTC +
Preference number: 4 (lower is better)
Translates to: SEPLRSRSVEQNVGTRVGLSFLH*LVCNHF
Trigger: GAAATGGTTGCAAACCAATCAGTGTAGGAAGCTTAA...TCCCACCCTAGTACCCACGTTTTGCTCCACACTCCTTGACCGCAGGGGCTCGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR TCA 90 bp TTTGTGTCCGAGCCCCTGCGGTCAAGGAGTGTGGAGCAAAACGTGGGTACTAGGATGGGAAAAACTCAGTaGTGCCAAACCAGAGACAGA +
Preference number: 4 (lower is better)
Translates to: FVSEPLRSRSVEQNVGTRMGKTQ*CQTRDR
Trigger: TCTGTCTCTGGTTTGGCATCACTGAGTTTTTCCCAT...CCTAGTACCCACGTTTTGCTCCACACTCCTTGACCGCAGGGGCTCGGACACAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR GCA 90 bp GGGACTCCATCTTGTTTATCTCCCACAGATAAACACATGTTCCCCCTACGCTTTTTGTGTCCGAGCCCCTaGGGTCAAGGAGTGTGGAGC +
Preference number: 4 (lower is better)
Translates to: GTPSCLSPTDKHMFPLRFLCPSP*GQGVWS
Trigger: GCTCCACACTCCTTGACCGCAGGGGCTCGGACACAA...AAAGCGTAGGGGGAACATGTGTTTATCTGTGGGAGATAAACAAGATGGAGTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR CCA 90 bp CATAAATATTGCATAGGAGAGCAAAACCCTCCCAGCCCTAGCCAGCGCTGGCTGTTGCCAAAAGGCGGCTaGGTATCCTTGGTGTTTGTG +
Preference number: 4 (lower is better)
Translates to: HKYCIGEQNPPSPSQRWLLPKGG*VSLVFV
Trigger: CACAAACACCAAGGATACCCAGCCGCCTTTTGGCAA...CAGCCAGCGCTGGCTAGGGCTGGGAGGGTTTTGCTCTCCTATGCAATATTTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR CCA 90 bp CATAAATATTGCATAGGAGAGCAAAACCCTCCCAGCCCTAGCCAGCGCTGGCTGCACATGAGTCCTGTATaGAGCAGTGTCTCAGCCACT +
Preference number: 4 (lower is better)
Translates to: HKYCIGEQNPPSPSQRWLHMSPV*SSVSAT
Trigger: AGTGGCTGAGACACTGCTCCATACAGGACTCATGTG...CAGCCAGCGCTGGCTAGGGCTGGGAGGGTTTTGCTCTCCTATGCAATATTTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR CCA 90 bp GCTCCAGCAAAGCCAAATCATGTCTCCTCTGGCCACTGCGGTCCTCTCCTTGGTAGTCATAAGATTGGGTaGGCAATGACCACACATGAG +
Preference number: 4 (lower is better)
Translates to: APAKPNHVSSGHCGPLLGSHKIG*AMTTHE
Trigger: CTCATGTGTGGTCATTGCCCACCCAATCTTATGACT...ACCAAGGAGAGGACCGCAGTGGCCAGAGGAGACATGATTTGGCTTTGCTGGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR CCA 90 bp CATAAATATTGCATAGGAGAGCAAAACCCTCCCAGCCCTAGCCAGCGCTGGCTGGCGGATTTTGACTCATaGGTAACCTCCGACATGCCA +
Preference number: 4 (lower is better)
Translates to: HKYCIGEQNPPSPSQRWLADFDS*VTSDMP
Trigger: TGGCATGTCGGAGGTTACCCATGAGTCAAAATCCGC...CAGCCAGCGCTGGCTAGGGCTGGGAGGGTTTTGCTCTCCTATGCAATATTTATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR CCA 90 bp TGTCTCCTCTGGCCACTGCGGTCCTCTCCTTGGTACATGTCATCCCCCAGAGGAAATGAGTGGCTTCAATaGGGTGTCAAGAGTAAGCAT +
Preference number: 4 (lower is better)
Translates to: CLLWPLRSSPWYMSSPRGNEWLQ*GVKSKH
Trigger: ATGCTTACTCTTGACACCCCATTGAAGCCACTCATT...TCCTCTGGGGGATGACATGTACCAAGGAGAGGACCGCAGTGGCCAGAGGAGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR CCA 90 bp GTGGGAGGCGGGGAAAGGCCACAGCACACTGGCGCTCCAGCAAAGCCAAATCATCAAATACAGATCGTATaGGTTTGTTTGTGTGTGGGT +
Preference number: 4 (lower is better)
Translates to: VGGGERPQHTGAPAKPNHQIQIV*VCLCVG
Trigger: ACCCACACACAAACAAACCCATACGATCTGTATTTG...ATGATTTGGCTTTGCTGGAGCGCCAGTGTGCTGTGGCCTTTCCCCGCCTCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR TCA 90 bp GCCACAGGGCTCCAACATCAGACCTTGAAAACACCGAGGACAAAATATCGATCACCTGACATGGTGACATaGTGCCCTGCGCGATCATCT +
Preference number: 4 (lower is better)
Translates to: ATGLQHQTLKTPRTKYRSPDMVT*CPARSS
Trigger: AGATGATCGCGCAGGGCATCATGTCACCATGTCAGG...TGATCGATATTTTGTCCTCGGTGTTTTCAAGGTCTGATGTTGGAGCCCTGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR TCA 90 bp GTGGGAGGCGGGGAAAGGCCACAGCACACTGGCGCTCCAGCAAAGCCAAATCATGTTGTAGCACCATGGTaGTCTGTATTCAAAGAAAAA +
Preference number: 4 (lower is better)
Translates to: VGGGERPQHTGAPAKPNHVVAPW*SVFKEK
Trigger: TTTTTCTTTGAATACAGATCACCATGGTGCTACAAC...ATGATTTGGCTTTGCTGGAGCGCCAGTGTGCTGTGGCCTTTCCCCGCCTCCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR TCA 90 bp CCTGGTAATCGACTGGAAACGTCCCCTGTTGGCCATGCTAAGATTCCTTCAACATTGACTAACTGGGGCTaGGTGGCAGCTATGACTGTC +
Preference number: 4 (lower is better)
Translates to: PGNRLETSPVGHAKIPSTLTNWG*VAAMTV
Trigger: GACAGTCATAGCTGCCACTCAGCCCCAGTTAGTCAA...TGTTGAAGGAATCTTAGCATGGCCAACAGGGGACGTTTCCAGTCGATTACCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR GCA 90 bp TCCGAGCCCCTGCGGTCAAGGAGTGTGGAGCAAAACGTGGGTACTAGGGTGGGAAGAAGGCATAAATATTaGATAGGAGAGCAAAACCCT +
Preference number: 4 (lower is better)
Translates to: SEPLRSRSVEQNVGTRVGRRHKY*IGEQNP
Trigger: AGGGTTTTGCTCTCCTATGCAATATTTATGCCTTCT...TCCCACCCTAGTACCCACGTTTTGCTCCACACTCCTTGACCGCAGGGGCTCGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR GCA 90 bp GCTCCAGCAAAGCCAAATCATGTCTCCTCTGGCCACTGCGGTCCTCTCCTTGGTAAAGCTATTCCACTATaGACTCATCAACCCTGGCTT +
Preference number: 4 (lower is better)
Translates to: APAKPNHVSSGHCGPLLGKAIPL*THQPWL
Trigger: AAGCCAGGGTTGATGAGTGCATAGTGGAATAGCTTT...ACCAAGGAGAGGACCGCAGTGGCCAGAGGAGACATGATTTGGCTTTGCTGGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR CCA 90 bp CTTATGTCAGAGGGGAATAGGATTGATTGTATCTGTGAGGCTGGCAACCCCACACACCCCTCTGGAATCTaGGGTTGCTGCTGTTCCAGT +
Preference number: 4 (lower is better)
Translates to: LMSEGNRIDCICEAGNPTHPSGI*GCCCSS
Trigger: ACTGGAACAGCAGCAACCCCAGATTCCAGAGGGGTG...TGTGGGGTTGCCAGCCTCACAGATACAATCAATCCTATTCCCCTCTGACATAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR CCA 90 bp GCCACAGGGCTCCAACATCAGACCTTGAAAACACCGAGGACAAAATATCGATCACTGCGGTCCTCTCCTTaGTACATGTCATCCCCCAGA +
Preference number: 4 (lower is better)
Translates to: ATGLQHQTLKTPRTKYRSLRSSP*YMSSPR
Trigger: TCTGGGGGATGACATGTACCAAGGAGAGGACCGCAG...TGATCGATATTTTGTCCTCGGTGTTTTCAAGGTCTGATGTTGGAGCCCTGTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR CCA 90 bp CCTGGTAATCGACTGGAAACGTCCCCTGTTGGCCATGCTAAGATTCCTTCAACAAAATCATGTCTCCTCTaGCCACTGCGGTCCTCTCCT +
Preference number: 4 (lower is better)
Translates to: PGNRLETSPVGHAKIPSTKSCLL*PLRSSP
Trigger: AGGAGAGGACCGCAGTGGCCAGAGGAGACATGATTT...TGTTGAAGGAATCTTAGCATGGCCAACAGGGGACGTTTCCAGTCGATTACCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR TCA 90 bp CCTGGTAATCGACTGGAAACGTCCCCTGTTGGCCATGCTAAGATTCCTTCAACAATGGAGAGCGGATTTTaGCTCATGGGTAACCTCCGA +
Preference number: 4 (lower is better)
Translates to: PGNRLETSPVGHAKIPSTMESGF*LMGNLR
Trigger: TCGGAGGTTACCCATGAGTCAAAATCCGCTCTCCAT...TGTTGAAGGAATCTTAGCATGGCCAACAGGGGACGTTTCCAGTCGATTACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR CCA 90 bp ACCTGGTCTATTAAAGGATACACGGTATCCACTAAACAGACAGATCCTTATTTCAGGCGCCCACCAAGCTaGGGAGGGGTAGGAGAGCGA +
Preference number: 4 (lower is better)
Translates to: TWSIKGYTVSTKQTDPYFRRPPS*GGVGER
Trigger: TCGCTCTCCTACCCCTCCCCAGCTTGGTGGGCGCCT...GAAATAAGGATCTGTCTGTTTAGTGGATACCGTGTATCCTTTAATAGACCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR CCA 90 bp GCTCCAGCAAAGCCAAATCATGTCTCCTCTGGCCACTGCGGTCCTCTCCTTGGTAGCCATGGTACACATTaGATGTTTCAAAGCCTCAAT +
Preference number: 4 (lower is better)
Translates to: APAKPNHVSSGHCGPLLGSHGTH*MFQSLN
Trigger: ATTGAGGCTTTGAAACATCCAATGTGTACCATGGCT...ACCAAGGAGAGGACCGCAGTGGCCAGAGGAGACATGATTTGGCTTTGCTGGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR CCA 90 bp TTTGTGTCCGAGCCCCTGCGGTCAAGGAGTGTGGAGCAAAACGTGGGTACTAGGTCTGAGAGCAATGAATaGAAAGGAGGAGTTGAAAAC +
Preference number: 4 (lower is better)
Translates to: FVSEPLRSRSVEQNVGTRSESNE*KGGVEN
Trigger: GTTTTCAACTCCTCCTTTCCATTCATTGCTCTCAGA...CCTAGTACCCACGTTTTGCTCCACACTCCTTGACCGCAGGGGCTCGGACACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR CCA 90 bp AAGTCTTTGGGACTCCATCTTGTTTATCTCCCACAGATAAACACATGTTCCCCCAGGACCACACGGAGCTaGACTTCACACCCAGACGCA +
Preference number: 4 (lower is better)
Translates to: KSLGLHLVYLPQINTCSPRTTRS*TSHPDA
Trigger: TGCGTCTGGGTGTGAAGTCCAGCTCCGTGTGGTCCT...GGGGGAACATGTGTTTATCTGTGGGAGATAAACAAGATGGAGTCCCAAAGACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR TCA 90 bp GCTCCAGCAAAGCCAAATCATGTCTCCTCTGGCCACTGCGGTCCTCTCCTTGGTGCATGTTTTGTATCCTaGAAGTCTATTGTTCTCACT +
Preference number: 4 (lower is better)
Translates to: APAKPNHVSSGHCGPLLGACFVS*KSIVLT
Trigger: AGTGAGAACAATAGACTTTCAGGATACAAAACATGC...ACCAAGGAGAGGACCGCAGTGGCCAGAGGAGACATGATTTGGCTTTGCTGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR GCA 90 bp TTTGTGTCCGAGCCCCTGCGGTCAAGGAGTGTGGAGCAAAACGTGGGTACTAGGTCCATTATCTGGGATTaGAGAGGAGATGTAGAAATA +
Preference number: 4 (lower is better)
Translates to: FVSEPLRSRSVEQNVGTRSIIWD*RGDVEI
Trigger: TATTTCTACATCTCCTCTGCAATCCCAGATAATGGA...CCTAGTACCCACGTTTTGCTCCACACTCCTTGACCGCAGGGGCTCGGACACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR CCA 90 bp CATGCTAAGATTCCTTCAACAGGGTCATCCTGCATTTATTCTCCTTCTGCCCCACTTCAGCGGTCCATTTaGAGAGTGAGGCCGGTTACA +
Preference number: 4 (lower is better)
Translates to: HAKIPSTGSSCIYSPSAPLQRSI*RVRPVT
Trigger: TGTAACCGGCCTCACTCTCCAAATGGACCGCTGAAG...TGGGGCAGAAGGAGAATAAATGCAGGATGACCCTGTTGAAGGAATCTTAGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR CCA 90 bp TGTCTCCTCTGGCCACTGCGGTCCTCTCCTTGGTACATGTCATCCCCCAGAGGATTTGGCATTTTCATCTaGAGTCCATTTAATTTGGGA +
Preference number: 4 (lower is better)
Translates to: CLLWPLRSSPWYMSSPRGFGIFI*SPFNLG
Trigger: TCCCAAATTAAATGGACTCCAGATGAAAATGCCAAA...TCCTCTGGGGGATGACATGTACCAAGGAGAGGACCGCAGTGGCCAGAGGAGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR CAA 72 bp TTGCATTTCCTGGTAATCGACTGGAAACGTCCCCTGTaGGCCATGCTAAGATTCCTTCAACAGGGTCATCCT +
Preference number: 4 (lower is better)
Translates to: LHFLVIDWKRPL*AMLRFLQQGHP
Trigger: AGGATGACCCTGTTGAAGGAATCTTAGCATGGCCAACAGGGGACGTTTCCAGTCGATTACCAGGAAATGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR GCA 90 bp AAAGCTTCTAAAAGTTGCATCAACATCCTCCTAAGCCCCCAGAGGATTGTAACAGTCAACATCTCCACGTaGAACATCACGCCTGGCCAG +
Preference number: 4 (lower is better)
Translates to: KASKSCINILLSPQRIVTVNIST*NITPGQ
Trigger: CTGGCCAGGCGTGATGTTGCACGTGGAGATGTTGAC...TGTTACAATCCTCTGGGGGCTTAGGAGGATGTTGATGCAACTTTTAGAAGCTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR GCA 90 bp GGGACTCCATCTTGTTTATCTCCCACAGATAAACACATGTTCCCCCTACGCTTTTCTGGAATCTGGGGTTaGTGCTGTTCCAGTAGACAG +
Preference number: 4 (lower is better)
Translates to: GTPSCLSPTDKHMFPLRFSGIWG*CCSSRQ
Trigger: CTGTCTACTGGAACAGCAGCAACCCCAGATTCCAGA...AAAGCGTAGGGGGAACATGTGTTTATCTGTGGGAGATAAACAAGATGGAGTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR GCA 90 bp CATAAATATTGCATAGGAGAGCAAAACCCTCCCAGCCCTAGCCAGCGCTGGCTGTACTTTTCTTTCCTCTaGCACCCAAGAAAGTACAGT +
Preference number: 4 (lower is better)
Translates to: HKYCIGEQNPPSPSQRWLYFSFL*HPRKYS
Trigger: ACTGTACTTTCTTGGGTGGCAGAGGAAAGAAAAGTA...CAGCCAGCGCTGGCTAGGGCTGGGAGGGTTTTGCTCTCCTATGCAATATTTATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR GCA 90 bp TTTGTGTCCGAGCCCCTGCGGTCAAGGAGTGTGGAGCAAAACGTGGGTACTAGGGTTTCAAAGCCTCAATaGATGTTTTGTATCCTGAAA +
Preference number: 4 (lower is better)
Translates to: FVSEPLRSRSVEQNVGTRVSKPQ*MFCILK
Trigger: TTTCAGGATACAAAACATGCATTGAGGCTTTGAAAC...CCTAGTACCCACGTTTTGCTCCACACTCCTTGACCGCAGGGGCTCGGACACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR CCA 90 bp GCATTAGCTATGATTTCATCACTTACAGGTAGAGAAGCTTACTGTCTACTGGTGGCGGCTGGGTATCCTTaGTGTTTGTGCCGCGTTCTC +
Preference number: 4 (lower is better)
Translates to: ALAMISSLTGREAYCLLVAAGYP*CLCRVL
Trigger: GAGAACGCGGCACAAACACCAAGGATACCCAGCCGC...CACCAGTAGACAGTAAGCTTCTCTACCTGTAAGTGATGAAATCATAGCTAATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR CCA 90 bp TTGGCCATGCTAAGATTCCTTCAACAGGGTCATCCTGCATTTATTCTCCTTCTGTTCCTGGTAATCGACTaGAAACGTCCCCTGTTGGCC +
Preference number: 4 (lower is better)
Translates to: LAMLRFLQQGHPAFILLLFLVID*KRPLLA
Trigger: GGCCAACAGGGGACGTTTCCAGTCGATTACCAGGAA...CAGAAGGAGAATAAATGCAGGATGACCCTGTTGAAGGAATCTTAGCATGGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR CCA 90 bp TTTGTGTCCGAGCCCCTGCGGTCAAGGAGTGTGGAGCAAAACGTGGGTACTAGGTCCTTGTCTAGGCTTTaGATTTTAAAGTTCATGACA +
Preference number: 4 (lower is better)
Translates to: FVSEPLRSRSVEQNVGTRSLSRL*ILKFMT
Trigger: TGTCATGAACTTTAAAATCCAAAGCCTAGACAAGGA...CCTAGTACCCACGTTTTGCTCCACACTCCTTGACCGCAGGGGCTCGGACACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR CCA 90 bp CAGGTAAGCCCAGATTACATTTCAACATGTGTACAACTCTCCAGGGCACAATACATGTTGCAAAGCCCTTaGCAACCAGGGGCAAAGGTC +
Preference number: 4 (lower is better)
Translates to: QVSPDYISTCVQLSRAQYMLQSP*QPGAKV
Trigger: GACCTTTGCCCCTGGTTGCCAAGGGCTTTGCAACAT...GTATTGTGCCCTGGAGAGTTGTACACATGTTGAAATGTAATCTGGGCTTACCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR CCA 90 bp AAGTCTTTGGGACTCCATCTTGTTTATCTCCCACAGATAAACACATGTTCCCCCTTCAAACCAACATGCTaGTGGAGAAGGGAGGGTGGG +
Preference number: 4 (lower is better)
Translates to: KSLGLHLVYLPQINTCSPFKPTC*WRREGG
Trigger: CCCACCCTCCCTTCTCCACCAGCATGTTGGTTTGAA...GGGGGAACATGTGTTTATCTGTGGGAGATAAACAAGATGGAGTCCCAAAGACTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR TCA 90 bp CAGGTAAGCCCAGATTACATTTCAACATGTGTACAACTCTCCAGGGCACAATACGAACAGACTCGGCAGTaGCATCCACTCCAAATGGAT +
Preference number: 4 (lower is better)
Translates to: QVSPDYISTCVQLSRAQYEQTRQ*HPLQMD
Trigger: ATCCATTTGGAGTGGATGTCACTGCCGAGTCTGTTC...GTATTGTGCCCTGGAGAGTTGTACACATGTTGAAATGTAATCTGGGCTTACCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR TCA 90 bp CTAAACAGACAGATCCTTATTTCCCTGCTTGATGTTGCAAAGCCCTTGGCAACCTTCCAGGTCCCAAGATaGTGGAGTCATAAGATTGGG +
Preference number: 4 (lower is better)
Translates to: LNRQILISLLDVAKPLATFQVPR*WSHKIG
Trigger: CCCAATCTTATGACTCCATCATCTTGGGACCTGGAA...GGTTGCCAAGGGCTTTGCAACATCAAGCAGGGAAATAAGGATCTGTCTGTTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR GCA 90 bp TGGTGTCACTATGACAATTTGGCATTTTCATCTGGAGTCCATTTAATTTGGGAGTATCCTTGGTGTTTGTaGCGCGTTCTCGCCGCGGGA +
Preference number: 4 (lower is better)
Translates to: WCHYDNLAFSSGVHLIWEYPWCL*RVLAAG
Trigger: TCCCGCGGCGAGAACGCGGCACAAACACCAAGGATA...CTCCCAAATTAAATGGACTCCAGATGAAAATGCCAAATTGTCATAGTGACACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR GCA 90 bp ACCTGGTCTATTAAAGGATACACGGTATCCACTAAACAGACAGATCCTTATTTCAGCCCGCTGACACAGTaGGCTAACGGAGGTGAGTTC +
Preference number: 4 (lower is better)
Translates to: TWSIKGYTVSTKQTDPYFSPLTQ*ANGGEF
Trigger: GAACTCACCTCCGTTAGCGCACTGTGTCAGCGGGCT...GAAATAAGGATCTGTCTGTTTAGTGGATACCGTGTATCCTTTAATAGACCAGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR GCA 90 bp CTTATGTCAGAGGGGAATAGGATTGATTGTATCTGTGAGGCTGGCAACCCCACACATTTATTCTCCTTCTaGCCCACCCCCACAATGAAA +
Preference number: 4 (lower is better)
Translates to: LMSEGNRIDCICEAGNPTHLFSF*PTPTMK
Trigger: TTTCATTGTGGGGGTGGGGCAGAAGGAGAATAAATG...TGTGGGGTTGCCAGCCTCACAGATACAATCAATCCTATTCCCCTCTGACATAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR GCA 90 bp CTTATGTCAGAGGGGAATAGGATTGATTGTATCTGTGAGGCTGGCAACCCCACACACTCGATGAGTAAGTaGAAAGGAACTGCAAAGCAG +
Preference number: 4 (lower is better)
Translates to: LMSEGNRIDCICEAGNPTHSMSK*KGTAKQ
Trigger: CTGCTTTGCAGTTCCTTTGCACTTACTCATCGAGTG...TGTGGGGTTGCCAGCCTCACAGATACAATCAATCCTATTCCCCTCTGACATAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR CCA 90 bp GGGACTCCATCTTGTTTATCTCCCACAGATAAACACATGTTCCCCCTACGCTTTCTCAGTCTTATCTTCTaGGACGGAGTCCTCATAGTG +
Preference number: 4 (lower is better)
Translates to: GTPSCLSPTDKHMFPLRFLSLIF*DGVLIV
Trigger: CACTATGAGGACTCCGTCCCAGAAGATAAGACTGAG...AAAGCGTAGGGGGAACATGTGTTTATCTGTGGGAGATAAACAAGATGGAGTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR CCA 90 bp ACCTGGTCTATTAAAGGATACACGGTATCCACTAAACAGACAGATCCTTATTTCGTGTGGAGCAAAACGTaGGTACTAGGGTGGGAGGCG +
Preference number: 4 (lower is better)
Translates to: TWSIKGYTVSTKQTDPYFVWSKT*VLGWEA
Trigger: CGCCTCCCACCCTAGTACCCACGTTTTGCTCCACAC...GAAATAAGGATCTGTCTGTTTAGTGGATACCGTGTATCCTTTAATAGACCAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR CCA 90 bp AAGTCTTTGGGACTCCATCTTGTTTATCTCCCACAGATAAACACATGTTCCCCCGCAACCCCACACACATaGTTCCATGTGAGAACAGAC +
Preference number: 4 (lower is better)
Translates to: KSLGLHLVYLPQINTCSPATPHT*FHVRTD
Trigger: GTCTGTTCTCACATGGAACCATGTGTGTGGGGTTGC...GGGGGAACATGTGTTTATCTGTGGGAGATAAACAAGATGGAGTCCCAAAGACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR CCA 90 bp AAAGCTTCTAAAAGTTGCATCAACATCCTCCTAAGCCCCCAGAGGATTGTAACACCTGGGGCCAATGCATaGGAAAAACTCAGTGATGCC +
Preference number: 4 (lower is better)
Translates to: KASKSCINILLSPQRIVTPGANA*EKLSDA
Trigger: GGCATCACTGAGTTTTTCCCATGCATTGGCCCCAGG...TGTTACAATCCTCTGGGGGCTTAGGAGGATGTTGATGCAACTTTTAGAAGCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR CCA 90 bp TTGGCCATGCTAAGATTCCTTCAACAGGGTCATCCTGCATTTATTCTCCTTCTGCGCACACACAATGAGTaGCTTCAATGGGGTGTCAAG +
Preference number: 4 (lower is better)
Translates to: LAMLRFLQQGHPAFILLLRTHNE*LQWGVK
Trigger: CTTGACACCCCATTGAAGCCACTCATTGTGTGTGCG...CAGAAGGAGAATAAATGCAGGATGACCCTGTTGAAGGAATCTTAGCATGGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR TCA 90 bp ACTCCTATAGGAAATGGTGTAATATCGTATCTATTCTTAATACCTCCCCTCCGGCAGACGCACACACAATaGGTGGCTTCAATGGGGTGT +
Preference number: 4 (lower is better)
Translates to: TPIGNGVISYLFLIPPLRQTHTQ*VASMGC
Trigger: ACACCCCATTGAAGCCACTCATTGTGTGTGCGTCTG...CCGGAGGGGAGGTATTAAGAATAGATACGATATTACACCATTTCCTATAGGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR GCA 90 bp TGGTGTCACTATGACAATTTGGCATTTTCATCTGGAGTCCATTTAATTTGGGAGCTAGCCAGCGCTGGCTaGATCTGCCACTATTCTTCC +
Preference number: 4 (lower is better)
Translates to: WCHYDNLAFSSGVHLIWELASAG*ICHYSS
Trigger: GGAAGAATAGTGGCAGATGCAGCCAGCGCTGGCTAG...CTCCCAAATTAAATGGACTCCAGATGAAAATGCCAAATTGTCATAGTGACACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR GCA 90 bp CTTATGTCAGAGGGGAATAGGATTGATTGTATCTGTGAGGCTGGCAACCCCACAAGATCCTTATTTCCCTaGTTGATGTTGCAAAGCCCT +
Preference number: 4 (lower is better)
Translates to: LMSEGNRIDCICEAGNPTRSLFP*LMLQSP
Trigger: AGGGCTTTGCAACATCAAGCAGGGAAATAAGGATCT...TGTGGGGTTGCCAGCCTCACAGATACAATCAATCCTATTCCCCTCTGACATAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR CCA 90 bp ACTCCTATAGGAAATGGTGTAATATCGTATCTATTCTTAATACCTCCCCTCCGGTGCACTCATCAACCCTaGCTTGTCAGCCTTGGGGAA +
Preference number: 4 (lower is better)
Translates to: TPIGNGVISYLFLIPPLRCTHQP*LVSLGE
Trigger: TTCCCCAAGGCTGACAAGCCAGGGTTGATGAGTGCA...CCGGAGGGGAGGTATTAAGAATAGATACGATATTACACCATTTCCTATAGGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR CCA 90 bp TTGGCCATGCTAAGATTCCTTCAACAGGGTCATCCTGCATTTATTCTCCTTCTGCTACCCAAATCCCACTaGACCAACAAGCCTGTAACT +
Preference number: 4 (lower is better)
Translates to: LAMLRFLQQGHPAFILLLLPKSH*TNKPVT
Trigger: AGTTACAGGCTTGTTGGTCCAGTGGGATTTGGGTAG...CAGAAGGAGAATAAATGCAGGATGACCCTGTTGAAGGAATCTTAGCATGGCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR CCA 90 bp ACTCCTATAGGAAATGGTGTAATATCGTATCTATTCTTAATACCTCCCCTCCGGGGCAAACGGGGGTGTTaGTGGAGGCGGTTTTCAAAA +
Preference number: 4 (lower is better)
Translates to: TPIGNGVISYLFLIPPLRGKRGC*WRRFSK
Trigger: TTTTGAAAACCGCCTCCACCAACACCCCCGTTTGCC...CCGGAGGGGAGGTATTAAGAATAGATACGATATTACACCATTTCCTATAGGAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR CCA 90 bp CATGCTAAGATTCCTTCAACAGGGTCATCCTGCATTTATTCTCCTTCTGCCCCAAAACTGTACAGACAATaGGAGCAAGCCCATTGTAGG +
Preference number: 4 (lower is better)
Translates to: HAKIPSTGSSCIYSPSAPKLYRQ*EQAHCR
Trigger: CCTACAATGGGCTTGCTCCCATTGTCTGTACAGTTT...TGGGGCAGAAGGAGAATAAATGCAGGATGACCCTGTTGAAGGAATCTTAGCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR TCA 90 bp AAGTCTTTGGGACTCCATCTTGTTTATCTCCCACAGATAAACACATGTTCCCCCGAACTTTTGTTTTGGTaGAATGGTGGCTGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: KSLGLHLVYLPQINTCSPELLFW*NGGCLL
Trigger: CAGAAGGCAGCCACCATTTCACCAAAACAAAAGTTC...GGGGGAACATGTGTTTATCTGTGGGAGATAAACAAGATGGAGTCCCAAAGACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR TCA 90 bp TTGGCCATGCTAAGATTCCTTCAACAGGGTCATCCTGCATTTATTCTCCTTCTGCAAAACAGCACTCGATaGGTAAGTGCAAAGGAACTG +
Preference number: 4 (lower is better)
Translates to: LAMLRFLQQGHPAFILLLQNSTR*VSAKEL
Trigger: CAGTTCCTTTGCACTTACTCATCGAGTGCTGTTTTG...CAGAAGGAGAATAAATGCAGGATGACCCTGTTGAAGGAATCTTAGCATGGCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR CCA 90 bp AAGTCTTTGGGACTCCATCTTGTTTATCTCCCACAGATAAACACATGTTCCCCCGAGCTGACGAACCACTaGTGTCACTATGACAATTTG +
Preference number: 4 (lower is better)
Translates to: KSLGLHLVYLPQINTCSPELTNH*CHYDNL
Trigger: CAAATTGTCATAGTGACACCAGTGGTTCGTCAGCTC...GGGGGAACATGTGTTTATCTGTGGGAGATAAACAAGATGGAGTCCCAAAGACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR CCA 90 bp CTAAACAGACAGATCCTTATTTCCCTGCTTGATGTTGCAAAGCCCTTGGCAACCAAGCTTACTGTCTACTaGTGTGGACACTCTTGCTAT +
Preference number: 4 (lower is better)
Translates to: LNRQILISLLDVAKPLATKLTVY*CGHSCY
Trigger: ATAGCAAGAGTGTCCACACCAGTAGACAGTAAGCTT...GGTTGCCAAGGGCTTTGCAACATCAAGCAGGGAAATAAGGATCTGTCTGTTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR CCA 90 bp CTAAACAGACAGATCCTTATTTCCCTGCTTGATGTTGCAAAGCCCTTGGCAACCGCTTCCTACACTGATTaGTTTGCAACCATTTCCATG +
Preference number: 4 (lower is better)
Translates to: LNRQILISLLDVAKPLATASYTD*FATISM
Trigger: CATGGAAATGGTTGCAAACCAATCAGTGTAGGAAGC...GGTTGCCAAGGGCTTTGCAACATCAAGCAGGGAAATAAGGATCTGTCTGTTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR CAA 72 bp CAGGAGCTGACGAACCACTGGTGTCACTATGACAATTaGGCATTTTCATCTGGAGTCCATTTAATTTGGGAG +
Preference number: 4 (lower is better)
Translates to: QELTNHWCHYDN*AFSSGVHLIWE
Trigger: CTCCCAAATTAAATGGACTCCAGATGAAAATGCCAAATTGTCATAGTGACACCAGTGGTTCGTCAGCTCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333274.11
3UTR CAA 72 bp CCAAAGCTATTCCACTATGCACTCATCAACCCTGGCTaGTCAGCCTTGGGGAAGGTCACTTTATTCATAAAA +
Preference number: 4 (lower is better)
Translates to: PKLFHYALINPG*SALGKVTLFIK
Trigger: TTTTATGAATAAAGTGACCTTCCCCAAGGCTGACAAGCCAGGGTTGATGAGTGCATAGTGGAATAGCTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR TCA 90 bp GGGACTCCATCTTGTTTATCTCCCACAGATAAACACATGTTCCCCCTACGCTTTCATCCAGGTAGTCATTaGTACAGACATCAATATGGT +
Preference number: 4 (lower is better)
Translates to: GTPSCLSPTDKHMFPLRFHPGSH*YRHQYG
Trigger: ACCATATTGATGTCTGTATCAATGACTACCTGGATG...AAAGCGTAGGGGGAACATGTGTTTATCTGTGGGAGATAAACAAGATGGAGTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR TCA 90 bp TTGGCCATGCTAAGATTCCTTCAACAGGGTCATCCTGCATTTATTCTCCTTCTGTCCAACATCAGACCTTaGAAACACCGAGGACAAAAT +
Preference number: 4 (lower is better)
Translates to: LAMLRFLQQGHPAFILLLSNIRP*KHRGQN
Trigger: ATTTTGTCCTCGGTGTTTTCAAGGTCTGATGTTGGA...CAGAAGGAGAATAAATGCAGGATGACCCTGTTGAAGGAATCTTAGCATGGCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR GCA 90 bp GCCACAGGGCTCCAACATCAGACCTTGAAAACACCGAGGACAAAATATCGATCAAAAGCTTCTAAAAGTTaGATCAACATCCTCCTAAGC +
Preference number: 4 (lower is better)
Translates to: ATGLQHQTLKTPRTKYRSKASKS*INILLS
Trigger: GCTTAGGAGGATGTTGATGCAACTTTTAGAAGCTTT...TGATCGATATTTTGTCCTCGGTGTTTTCAAGGTCTGATGTTGGAGCCCTGTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR CCA 90 bp ACTCCTATAGGAAATGGTGTAATATCGTATCTATTCTTAATACCTCCCCTCCGGCTGGCTTGTCAGCCTTaGGGAAGGTCACTTTATTCA +
Preference number: 4 (lower is better)
Translates to: TPIGNGVISYLFLIPPLRLACQP*GRSLYS
Trigger: TGAATAAAGTGACCTTCCCCAAGGCTGACAAGCCAG...CCGGAGGGGAGGTATTAAGAATAGATACGATATTACACCATTTCCTATAGGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR CCA 90 bp ACCTGGTCTATTAAAGGATACACGGTATCCACTAAACAGACAGATCCTTATTTCTGCGGTCAAGGAGTGTaGAGCAAAACGTGGGTACTA +
Preference number: 4 (lower is better)
Translates to: TWSIKGYTVSTKQTDPYFCGQGV*SKTWVL
Trigger: TAGTACCCACGTTTTGCTCCACACTCCTTGACCGCA...GAAATAAGGATCTGTCTGTTTAGTGGATACCGTGTATCCTTTAATAGACCAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR CCA 90 bp CAGGTAAGCCCAGATTACATTTCAACATGTGTACAACTCTCCAGGGCACAATACGTTTTGGTGAAATGGTaGCTGCCTTCTGTGATAAGA +
Preference number: 4 (lower is better)
Translates to: QVSPDYISTCVQLSRAQYVLVKW*LPSVIR
Trigger: TCTTATCACAGAAGGCAGCCACCATTTCACCAAAAC...GTATTGTGCCCTGGAGAGTTGTACACATGTTGAAATGTAATCTGGGCTTACCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR CCA 90 bp CTAAACAGACAGATCCTTATTTCCCTGCTTGATGTTGCAAAGCCCTTGGCAACCACACGAACTGTTACCTaGTCTATTAAAGGATACACG +
Preference number: 4 (lower is better)
Translates to: LNRQILISLLDVAKPLATTRTVT*SIKGYT
Trigger: CGTGTATCCTTTAATAGACCAGGTAACAGTTCGTGT...GGTTGCCAAGGGCTTTGCAACATCAAGCAGGGAAATAAGGATCTGTCTGTTTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR GCA 90 bp TGGTGTCACTATGACAATTTGGCATTTTCATCTGGAGTCCATTTAATTTGGGAGTCTGTGATAAGACTCTaGCACTCCAGAGGAGTTCCT +
Preference number: 4 (lower is better)
Translates to: WCHYDNLAFSSGVHLIWESVIRL*HSRGVP
Trigger: AGGAACTCCTCTGGAGTGGCAGAGTCTTATCACAGA...CTCCCAAATTAAATGGACTCCAGATGAAAATGCCAAATTGTCATAGTGACACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR CCA 90 bp CTAAACAGACAGATCCTTATTTCCCTGCTTGATGTTGCAAAGCCCTTGGCAACCCATACAGCTATTTGTTaGTCTCACAAAGACTTTGAG +
Preference number: 4 (lower is better)
Translates to: LNRQILISLLDVAKPLATHTAIC*SHKDFE
Trigger: CTCAAAGTCTTTGTGAGACCAACAAATAGCTGTATG...GGTTGCCAAGGGCTTTGCAACATCAAGCAGGGAAATAAGGATCTGTCTGTTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR CCA 90 bp TTGGCCATGCTAAGATTCCTTCAACAGGGTCATCCTGCATTTATTCTCCTTCTGTACTGTCTACTGGTGTaGACACTCTTGCTATTTTCT +
Preference number: 4 (lower is better)
Translates to: LAMLRFLQQGHPAFILLLYCLLV*TLLLFS
Trigger: AGAAAATAGCAAGAGTGTCCACACCAGTAGACAGTA...CAGAAGGAGAATAAATGCAGGATGACCCTGTTGAAGGAATCTTAGCATGGCCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR GCA 90 bp CATGCTAAGATTCCTTCAACAGGGTCATCCTGCATTTATTCTCCTTCTGCCCCACAAAAATCTGACATCTaGCAAAACCCAATAACAAGT +
Preference number: 4 (lower is better)
Translates to: HAKIPSTGSSCIYSPSAPQKSDI*QNPITS
Trigger: ACTTGTTATTGGGTTTTGGCAGATGTCAGATTTTTG...TGGGGCAGAAGGAGAATAAATGCAGGATGACCCTGTTGAAGGAATCTTAGCATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR GCA 90 bp TTGGCCATGCTAAGATTCCTTCAACAGGGTCATCCTGCATTTATTCTCCTTCTGAAACTCCATGGCAAGTaGATTAGCTATGATTTCATC +
Preference number: 4 (lower is better)
Translates to: LAMLRFLQQGHPAFILLLKLHGK*ISYDFI
Trigger: GATGAAATCATAGCTAATGCACTTGCCATGGAGTTT...CAGAAGGAGAATAAATGCAGGATGACCCTGTTGAAGGAATCTTAGCATGGCCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR CCA 90 bp TGGTGTCACTATGACAATTTGGCATTTTCATCTGGAGTCCATTTAATTTGGGAGAAAGGAATCACAAGATaGAGAGAAGCGTGCGTGTGT +
Preference number: 4 (lower is better)
Translates to: WCHYDNLAFSSGVHLIWEKGITR*REACVC
Trigger: ACACACGCACGCTTCTCTCCATCTTGTGATTCCTTT...CTCCCAAATTAAATGGACTCCAGATGAAAATGCCAAATTGTCATAGTGACACCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR TCA 90 bp ACCTGGTCTATTAAAGGATACACGGTATCCACTAAACAGACAGATCCTTATTTCTGGCAGAGAGGGCCATaGGTAATTATTTCACCATTT +
Preference number: 4 (lower is better)
Translates to: TWSIKGYTVSTKQTDPYFWQRGP*VIISPF
Trigger: AAATGGTGAAATAATTACTCATGGCCCTCTCTGCCA...GAAATAAGGATCTGTCTGTTTAGTGGATACCGTGTATCCTTTAATAGACCAGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR TCA 90 bp ACTCCTATAGGAAATGGTGTAATATCGTATCTATTCTTAATACCTCCCCTCCGGAACCATTTCCATGAGTaGGCTGCACATGATATTGAT +
Preference number: 4 (lower is better)
Translates to: TPIGNGVISYLFLIPPLRNHFHE*AAHDID
Trigger: ATCAATATCATGTGCAGCTCACTCATGGAAATGGTT...CCGGAGGGGAGGTATTAAGAATAGATACGATATTACACCATTTCCTATAGGAGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR GCA 90 bp TGGTGTCACTATGACAATTTGGCATTTTCATCTGGAGTCCATTTAATTTGGGAGGATGGGAGGAGACTGTaGTATAATGTCAAAAGCATC +
Preference number: 4 (lower is better)
Translates to: WCHYDNLAFSSGVHLIWEDGRRL*YNVKSI
Trigger: GATGCTTTTGACATTATAGCACAGTCTCCTCCCATC...CTCCCAAATTAAATGGACTCCAGATGAAAATGCCAAATTGTCATAGTGACACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR TCA 90 bp ACTCCTATAGGAAATGGTGTAATATCGTATCTATTCTTAATACCTCCCCTCCGGCATGACAGGATCATTTaGTTTCCTTGTGGTTATAGA +
Preference number: 4 (lower is better)
Translates to: TPIGNGVISYLFLIPPLRHDRII*FPCGYR
Trigger: TCTATAACCACAAGGAAATCAAATGATCCTGTCATG...CCGGAGGGGAGGTATTAAGAATAGATACGATATTACACCATTTCCTATAGGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR GCA 90 bp TGGTGTCACTATGACAATTTGGCATTTTCATCTGGAGTCCATTTAATTTGGGAGCAATACGTTTACAGCTaGCTTTCCTTCACATACTTT +
Preference number: 4 (lower is better)
Translates to: WCHYDNLAFSSGVHLIWEQYVYS*LSFTYF
Trigger: AAAGTATGTGAAGGAAAGGCAGCTGTAAACGTATTG...CTCCCAAATTAAATGGACTCCAGATGAAAATGCCAAATTGTCATAGTGACACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS CCA 90 bp CACCAGAAACACCAGCGTCAACATCTCCACGTGCAACATCACGCCTaGCCAGCGGCGGAGCCCCCGACGCGCCACTCCGGGGAGAGAGCG +
Preference number: 5 (lower is better)
Translates to: HQKHQRQHLHVQHHA*PAAEPPTRHSGERA
Trigger: CGCTCTCTCCCCGGAGTGGCGCGTCGGGGGCTCCGCCGCTGGCCAGGCGTGATGTTGCACGTGGAGATGTTGACGCTGGTGTTTCTGGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000333274.11
ENST00000504941.1
CDS-3UTR CAA 90 bp GCGGGGAAAGGCCACAGCACACTGGCGCTCCAGCAAAGCCAAATCATGTCTCCTCGGTCGGCGACGGCCTaGGAGCCCGGGTCCTGGCTG +
Preference number: 5 (lower is better)
Translates to: AGKGHSTLALQQSQIMSPRSATA*EPGSWL
Trigger: CAGCCAGGACCCGGGCTCCAAGGCCGTCGCCGACCG...AGGAGACATGATTTGGCTTTGCTGGAGCGCCAGTGTGCTGTGGCCTTTCCCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS TCA 90 bp AGACAGCGTAGCGGTCGGCGACGGCCTTGGAGCCCGGGTCCTGGCTaGACACACACATCCAGAGCACCAGAAACACCAGCGTCAACATCT +
Preference number: 5 (lower is better)
Translates to: RQRSGRRRPWSPGPG*THTSRAPETPASTS
Trigger: AGATGTTGACGCTGGTGTTTCTGGTGCTCTGGATGTGTGTGTTCAGCCAGGACCCGGGCTCCAAGGCCGTCGCCGACCGCTACGCTGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333274.11
ENST00000504941.1
ENST00000509503.1
CDS-3UTR CAA 90 bp GCGGGGAAAGGCCACAGCACACTGGCGCTCCAGCAAAGCCAAATCATGTCTCCTGGGTATCCTTGGTGTTaGTGCCGCGTTCTCGCCGCG +
Preference number: 5 (lower is better)
Translates to: AGKGHSTLALQQSQIMSPGYPWC*CRVLAA
Trigger: CGCGGCGAGAACGCGGCACAAACACCAAGGATACCC...AGGAGACATGATTTGGCTTTGCTGGAGCGCCAGTGTGCTGTGGCCTTTCCCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR CAA 90 bp GTGGGAGGCGGGGAAAGGCCACAGCACACTGGCGCTCCAGCAAAGCCAAATCATGGCGGCTGGGTATCCTaGGTGTTTGTGCCGCGTTCT +
Preference number: 5 (lower is better)
Translates to: VGGGERPQHTGAPAKPNHGGWVS*VFVPRS
Trigger: AGAACGCGGCACAAACACCAAGGATACCCAGCCGCC...ATGATTTGGCTTTGCTGGAGCGCCAGTGTGCTGTGGCCTTTCCCCGCCTCCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR CAA 90 bp TTTGTGTCCGAGCCCCTGCGGTCAAGGAGTGTGGAGCAAAACGTGGGTACTAGGCCTGGTGACAGGGGTTaGTGTCCGAGCCCCTGCGGT +
Preference number: 5 (lower is better)
Translates to: FVSEPLRSRSVEQNVGTRPGDRG*CPSPCG
Trigger: ACCGCAGGGGCTCGGACACAAACCCCTGTCACCAGG...CCTAGTACCCACGTTTTGCTCCACACTCCTTGACCGCAGGGGCTCGGACACAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR CAA 90 bp TCCGAGCCCCTGCGGTCAAGGAGTGTGGAGCAAAACGTGGGTACTAGGGTGGGAACTTCAGCGGTCCATTaGGAGAGTGAGGCCGGTTAC +
Preference number: 5 (lower is better)
Translates to: SEPLRSRSVEQNVGTRVGTSAVH*ESEAGY
Trigger: GTAACCGGCCTCACTCTCCAAATGGACCGCTGAAGT...TCCCACCCTAGTACCCACGTTTTGCTCCACACTCCTTGACCGCAGGGGCTCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS CCA 90 bp TCAAAAGCATCGCCAGGAGGAACAGTAGGATTGCCAAAAGGCGGCTaGGTATCCTTGGTGTTTGTGCCGCGTTCTCGCCGCGGGATGGCT +
Preference number: 5 (lower is better)
Translates to: SKASPGGTVGLPKGG*VSLVFVPRSRRGMA
Trigger: AGCCATCCCGCGGCGAGAACGCGGCACAAACACCAAGGATACCCAGCCGCCTTTTGGCAATCCTACTGTTCCTCCTGGCGATGCTTTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333274.11
ENST00000509503.1
ENST00000510359.1
CDS-3UTR CAA 90 bp GCTCCAGCAAAGCCAAATCATGTCTCCTCTGGCCACTGCGGTCCTCTCCTTGGTCATCTCTTGAACCCTTaGGAAGTGTGGTCGCAGGCA +
Preference number: 5 (lower is better)
Translates to: APAKPNHVSSGHCGPLLGHLLNP*EVWSQA
Trigger: TGCCTGCGACCACACTTCCAAAGGGTTCAAGAGATG...ACCAAGGAGAGGACCGCAGTGGCCAGAGGAGACATGATTTGGCTTTGCTGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR CAA 90 bp GAAAGGCCACAGCACACTGGCGCTCCAGCAAAGCCAAATCATGTCTCCTCTGGCTGGAGTCCATTTAATTaGGGAGGGGTGAGAGAAGCC +
Preference number: 5 (lower is better)
Translates to: ERPQHTGAPAKPNHVSSGWSPFN*GGVREA
Trigger: GGCTTCTCTCACCCCTCCCAAATTAAATGGACTCCA...GCCAGAGGAGACATGATTTGGCTTTGCTGGAGCGCCAGTGTGCTGTGGCCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR CAA 90 bp GAAAGGCCACAGCACACTGGCGCTCCAGCAAAGCCAAATCATGTCTCCTCTGGCTGGAAACGTCCCCTGTaGGCCATGCTAAGATTCCTT +
Preference number: 5 (lower is better)
Translates to: ERPQHTGAPAKPNHVSSGWKRPL*AMLRFL
Trigger: AAGGAATCTTAGCATGGCCAACAGGGGACGTTTCCA...GCCAGAGGAGACATGATTTGGCTTTGCTGGAGCGCCAGTGTGCTGTGGCCTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS TCA 90 bp TCAGCGGTCCATTTGGAGAGTGAGGCCGGTTACATTCCCATCTCTTaGACCCTTTGGAAGTGTGGTCGCAGGCACTGTAGCCATCAAAGT +
Preference number: 5 (lower is better)
Translates to: SAVHLESEAGYIPIS*TLWKCGRRHCSHQS
Trigger: ACTTTGATGGCTACAGTGCCTGCGACCACACTTCCAAAGGGTTCAAGAGATGGGAATGTAACCGGCCTCACTCTCCAAATGGACCGCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333274.11
ENST00000504941.1
ENST00000505499.1
ENST00000509503.1
CDS-3UTR CAA 90 bp GAAAGGCCACAGCACACTGGCGCTCCAGCAAAGCCAAATCATGTCTCCTCTGGCCTGACACCAATCATCTaGAAAACTCCATGGCAAGTG +
Preference number: 5 (lower is better)
Translates to: ERPQHTGAPAKPNHVSSGLTPII*KTPWQV
Trigger: CACTTGCCATGGAGTTTTCAAGATGATTGGTGTCAG...GCCAGAGGAGACATGATTTGGCTTTGCTGGAGCGCCAGTGTGCTGTGGCCTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR CAA 90 bp CCTGGTAATCGACTGGAAACGTCCCCTGTTGGCCATGCTAAGATTCCTTCAACAAAATGGCTGCTGCCGTaGCTAAGGCACCGGAGAAAA +
Preference number: 5 (lower is better)
Translates to: PGNRLETSPVGHAKIPSTKWLLP*LRHRRK
Trigger: TTTTCTCCGGTGCCTTAGCAACGGCAGCAGCCATTT...TGTTGAAGGAATCTTAGCATGGCCAACAGGGGACGTTTCCAGTCGATTACCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR CAA 90 bp CATAAATATTGCATAGGAGAGCAAAACCCTCCCAGCCCTAGCCAGCGCTGGCTGGGTCTCACAAAGACTTaGAGCTTTAGACAGGACCTT +
Preference number: 5 (lower is better)
Translates to: HKYCIGEQNPPSPSQRWLGLTKT*SFRQDL
Trigger: AAGGTCCTGTCTAAAGCTCAAAGTCTTTGTGAGACC...CAGCCAGCGCTGGCTAGGGCTGGGAGGGTTTTGCTCTCCTATGCAATATTTATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR CAA 90 bp GGGACTCCATCTTGTTTATCTCCCACAGATAAACACATGTTCCCCCTACGCTTTGGAGGAACAGTAGGATaGCCAAAAGGCGGCTGGGTA +
Preference number: 5 (lower is better)
Translates to: GTPSCLSPTDKHMFPLRFGGTVG*PKGGWV
Trigger: TACCCAGCCGCCTTTTGGCAATCCTACTGTTCCTCC...AAAGCGTAGGGGGAACATGTGTTTATCTGTGGGAGATAAACAAGATGGAGTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR CAA 90 bp CAGGTAAGCCCAGATTACATTTCAACATGTGTACAACTCTCCAGGGCACAATACCTCATCAACCCTGGCTaGTCAGCCTTGGGGAAGGTC +
Preference number: 5 (lower is better)
Translates to: QVSPDYISTCVQLSRAQYLINPG*SALGKV
Trigger: GACCTTCCCCAAGGCTGACAAGCCAGGGTTGATGAG...GTATTGTGCCCTGGAGAGTTGTACACATGTTGAAATGTAATCTGGGCTTACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR CAA 90 bp CAGGTAAGCCCAGATTACATTTCAACATGTGTACAACTCTCCAGGGCACAATACGATGTTGCAAAGCCCTaGGCAACCAGGGGCAAAGGT +
Preference number: 5 (lower is better)
Translates to: QVSPDYISTCVQLSRAQYDVAKP*ATRGKG
Trigger: ACCTTTGCCCCTGGTTGCCAAGGGCTTTGCAACATC...GTATTGTGCCCTGGAGAGTTGTACACATGTTGAAATGTAATCTGGGCTTACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR CAA 90 bp CAGGTAAGCCCAGATTACATTTCAACATGTGTACAACTCTCCAGGGCACAATACAGGCAAACGGGGGTGTaGGTGGAGGCGGTTTTCAAA +
Preference number: 5 (lower is better)
Translates to: QVSPDYISTCVQLSRAQYRQTGV*VEAVFK
Trigger: TTTGAAAACCGCCTCCACCAACACCCCCGTTTGCCT...GTATTGTGCCCTGGAGAGTTGTACACATGTTGAAATGTAATCTGGGCTTACCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS GCA 90 bp TCCAAGACCCTGATGTTTTCTGTGACAAGTGATGGGAGGAGACTGTaGTATAATGTCAAAAGCATCGCCAGGAGGAACAGTAGGATTGCC +
Preference number: 5 (lower is better)
Translates to: SKTLMFSVTSDGRRL*YNVKSIARRNSRIA
Trigger: GGCAATCCTACTGTTCCTCCTGGCGATGCTTTTGACATTATAGCACAGTCTCCTCCCATCACTTGTCACAGAAAACATCAGGGTCTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000333274.11
ENST00000510359.1
CDS CCA 90 bp ATCAAAGTTCACCATGTAGAGGACATAGCGCTCAGTCTTATCTTCTaGGACGGAGTCCTCATAGTGAGGGCAGAAAACATCCAGGTAGTC +
Preference number: 5 (lower is better)
Translates to: IKVHHVEDIALSLIF*DGVLIVRAENIQVV
Trigger: GACTACCTGGATGTTTTCTGCCCTCACTATGAGGACTCCGTCCCAGAAGATAAGACTGAGCGCTATGTCCTCTACATGGTGAACTTTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333274.11
ENST00000504941.1
ENST00000505499.1
ENST00000509503.1
CDS-3UTR CAA 90 bp CTAAACAGACAGATCCTTATTTCCCTGCTTGATGTTGCAAAGCCCTTGGCAACCGCCCCCAACCTGAAGTaGTTGCTTAGAATTCAGGCT +
Preference number: 5 (lower is better)
Translates to: LNRQILISLLDVAKPLATAPNLK*LLRIQA
Trigger: AGCCTGAATTCTAAGCAACAACTTCAGGTTGGGGGC...GGTTGCCAAGGGCTTTGCAACATCAAGCAGGGAAATAAGGATCTGTCTGTTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR CAA 90 bp TTGGCCATGCTAAGATTCCTTCAACAGGGTCATCCTGCATTTATTCTCCTTCTGCCTGGCTTGTCAGCCTaGGGGAAGGTCACTTTATTC +
Preference number: 5 (lower is better)
Translates to: LAMLRFLQQGHPAFILLLPGLSA*GKVTLF
Trigger: GAATAAAGTGACCTTCCCCAAGGCTGACAAGCCAGG...CAGAAGGAGAATAAATGCAGGATGACCCTGTTGAAGGAATCTTAGCATGGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR CAA 90 bp CATGCTAAGATTCCTTCAACAGGGTCATCCTGCATTTATTCTCCTTCTGCCCCACCCAACCTGAAGTTGTaGCTTAGAATTCAGGCTGAA +
Preference number: 5 (lower is better)
Translates to: HAKIPSTGSSCIYSPSAPPNLKL*LRIQAE
Trigger: TTCAGCCTGAATTCTAAGCAACAACTTCAGGTTGGG...TGGGGCAGAAGGAGAATAAATGCAGGATGACCCTGTTGAAGGAATCTTAGCATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR CAA 90 bp AAGTCTTTGGGACTCCATCTTGTTTATCTCCCACAGATAAACACATGTTCCCCCAAGGCATGGTTTCTGTaGACATGTCGTGCAAAGCCA +
Preference number: 5 (lower is better)
Translates to: KSLGLHLVYLPQINTCSPKAWFL*TCRAKP
Trigger: TGGCTTTGCACGACATGTCAACAGAAACCATGCCTT...GGGGGAACATGTGTTTATCTGTGGGAGATAAACAAGATGGAGTCCCAAAGACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR CAA 90 bp GGGACTCCATCTTGTTTATCTCCCACAGATAAACACATGTTCCCCCTACGCTTTCTCCAACATCAGACCTaGAAAACACCGAGGACAAAA +
Preference number: 5 (lower is better)
Translates to: GTPSCLSPTDKHMFPLRFLQHQT*KTPRTK
Trigger: TTTTGTCCTCGGTGTTTTCAAGGTCTGATGTTGGAG...AAAGCGTAGGGGGAACATGTGTTTATCTGTGGGAGATAAACAAGATGGAGTCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR CAA 90 bp TGGTGTCACTATGACAATTTGGCATTTTCATCTGGAGTCCATTTAATTTGGGAGTTTCCCTGCTTGATGTaGCAAAGCCCTTGGCAACCA +
Preference number: 5 (lower is better)
Translates to: WCHYDNLAFSSGVHLIWEFPCLM*QSPWQP
Trigger: TGGTTGCCAAGGGCTTTGCAACATCAAGCAGGGAAA...CTCCCAAATTAAATGGACTCCAGATGAAAATGCCAAATTGTCATAGTGACACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR CAA 90 bp ACTCCTATAGGAAATGGTGTAATATCGTATCTATTCTTAATACCTCCCCTCCGGTCCTTATTTCCCTGCTaGATGTTGCAAAGCCCTTGG +
Preference number: 5 (lower is better)
Translates to: TPIGNGVISYLFLIPPLRSLFPC*MLQSPW
Trigger: CCAAGGGCTTTGCAACATCAAGCAGGGAAATAAGGA...CCGGAGGGGAGGTATTAAGAATAGATACGATATTACACCATTTCCTATAGGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR CAA 90 bp AAAGCTTCTAAAAGTTGCATCAACATCCTCCTAAGCCCCCAGAGGATTGTAACACAGCCATGGTACACATaGGATGTTTCAAAGCCTCAA +
Preference number: 5 (lower is better)
Translates to: KASKSCINILLSPQRIVTQPWYT*DVSKPQ
Trigger: TTGAGGCTTTGAAACATCCAATGTGTACCATGGCTG...TGTTACAATCCTCTGGGGGCTTAGGAGGATGTTGATGCAACTTTTAGAAGCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR CAA 90 bp ACTCCTATAGGAAATGGTGTAATATCGTATCTATTCTTAATACCTCCCCTCCGGTTACATTCCCATCTCTaGAACCCTTTGGAAGTGTGG +
Preference number: 5 (lower is better)
Translates to: TPIGNGVISYLFLIPPLRLHSHL*NPLEVW
Trigger: CCACACTTCCAAAGGGTTCAAGAGATGGGAATGTAA...CCGGAGGGGAGGTATTAAGAATAGATACGATATTACACCATTTCCTATAGGAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR CAA 90 bp AAGTCTTTGGGACTCCATCTTGTTTATCTCCCACAGATAAACACATGTTCCCCCTGTCACTATGACAATTaGGCATTTTCATCTGGAGTC +
Preference number: 5 (lower is better)
Translates to: KSLGLHLVYLPQINTCSPCHYDN*AFSSGV
Trigger: GACTCCAGATGAAAATGCCAAATTGTCATAGTGACA...GGGGGAACATGTGTTTATCTGTGGGAGATAAACAAGATGGAGTCCCAAAGACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR CAA 90 bp TGGTGTCACTATGACAATTTGGCATTTTCATCTGGAGTCCATTTAATTTGGGAGCAGAGGGGAATAGGATaGATTGTATCTGTGAGGCTG +
Preference number: 5 (lower is better)
Translates to: WCHYDNLAFSSGVHLIWEQRGIG*IVSVRL
Trigger: CAGCCTCACAGATACAATCAATCCTATTCCCCTCTG...CTCCCAAATTAAATGGACTCCAGATGAAAATGCCAAATTGTCATAGTGACACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR CAA 90 bp CTAAACAGACAGATCCTTATTTCCCTGCTTGATGTTGCAAAGCCCTTGGCAACCCTGGTGTGGACACTCTaGCTATTTTCTTTATACTTA +
Preference number: 5 (lower is better)
Translates to: LNRQILISLLDVAKPLATLVWTL*LFSLYL
Trigger: TAAGTATAAAGAAAATAGCAAGAGTGTCCACACCAG...GGTTGCCAAGGGCTTTGCAACATCAAGCAGGGAAATAAGGATCTGTCTGTTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS-3UTR CAA 90 bp AAGTCTTTGGGACTCCATCTTGTTTATCTCCCACAGATAAACACATGTTCCCCCGCCTCAATGCATGTTTaGTATCCTGAAAGTCTATTG +
Preference number: 5 (lower is better)
Translates to: KSLGLHLVYLPQINTCSPASMHV*YPESLL
Trigger: CAATAGACTTTCAGGATACAAAACATGCATTGAGGC...GGGGGAACATGTGTTTATCTGTGGGAGATAAACAAGATGGAGTCCCAAAGACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000333274.11
CDS TCA 72 bp AGCGGTCGGCGACGGCCTTGGAGCCCGGGTCCTGGCTaGACACACACATCCAGAGCACCAGAAACACCAGCG +
Preference number: 6 (lower is better)
Translates to: SGRRRPWSPGPG*THTSRAPETPA
Trigger: CGCTGGTGTTTCTGGTGCTCTGGATGTGTGTGTTCAGCCAGGACCCGGGCTCCAAGGCCGTCGCCGACCGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000333274.11
ENST00000504941.1
ENST00000509503.1
CDS CAA 90 bp TCGCCAGGAGGAACAGTAGGATTGCCAAAAGGCGGCTGGGTATCCTaGGTGTTTGTGCCGCGTTCTCGCCGCGGGATGGCTCGGCTGACT +
Preference number: 6 (lower is better)
Translates to: SPGGTVGLPKGGWVS*VFVPRSRRGMARLT
Trigger: AGTCAGCCGAGCCATCCCGCGGCGAGAACGCGGCACAAACACCAAGGATACCCAGCCGCCTTTTGGCAATCCTACTGTTCCTCCTGGCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333274.11
ENST00000509503.1
ENST00000510359.1
CDS CCA 72 bp TCGCCAGGAGGAACAGTAGGATTGCCAAAAGGCGGCTaGGTATCCTTGGTGTTTGTGCCGCGTTCTCGCCGC +
Preference number: 6 (lower is better)
Translates to: SPGGTVGLPKGG*VSLVFVPRSRR
Trigger: GCGGCGAGAACGCGGCACAAACACCAAGGATACCCAGCCGCCTTTTGGCAATCCTACTGTTCCTCCTGGCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333274.11
ENST00000509503.1
ENST00000510359.1
CDS CAA 72 bp GGAACAGTAGGATTGCCAAAAGGCGGCTGGGTATCCTaGGTGTTTGTGCCGCGTTCTCGCCGCGGGATGGCT +
Preference number: 6 (lower is better)
Translates to: GTVGLPKGGWVS*VFVPRSRRGMA
Trigger: AGCCATCCCGCGGCGAGAACGCGGCACAAACACCAAGGATACCCAGCCGCCTTTTGGCAATCCTACTGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000333274.11
ENST00000509503.1
ENST00000510359.1
CDS TCA 72 bp TGTTTGTGCCGCGTTCTCGCCGCGGGATGGCTCGGCTaGCTCATGTACGGTGTCATTTGTTGGTCTCACAAA +
Preference number: 6 (lower is better)
Translates to: CLCRVLAAGWLG*LMYGVICWSHK
Trigger: TTTGTGAGACCAACAAATGACACCGTACATGAGTCAGCCGAGCCATCCCGCGGCGAGAACGCGGCACAAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509503.1
CDS TCA 72 bp CATTTGGAGAGTGAGGCCGGTTACATTCCCATCTCTTaGACCCTTTGGAAGTGTGGTCGCAGGCACTGTAGC +
Preference number: 6 (lower is better)
Translates to: HLESEAGYIPIS*TLWKCGRRHCS
Trigger: GCTACAGTGCCTGCGACCACACTTCCAAAGGGTTCAAGAGATGGGAATGTAACCGGCCTCACTCTCCAAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000333274.11
ENST00000504941.1
ENST00000505499.1
ENST00000509503.1
CDS CAA 90 bp GACTGTGCTATAATGTCAAAAGCATCGCCAGGAGGAACAGTAGGATaGCCAAAAGGCGGCTGGGTATCCTTGGTGTTTGTGCCGCGTTCT +
Preference number: 6 (lower is better)
Translates to: DCAIMSKASPGGTVG*PKGGWVSLVFVPRS
Trigger: AGAACGCGGCACAAACACCAAGGATACCCAGCCGCCTTTTGGCAATCCTACTGTTCCTCCTGGCGATGCTTTTGACATTATAGCACAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333274.11
ENST00000509503.1
ENST00000510359.1
CDS CCA 72 bp CACCATGTAGAGGACATAGCGCTCAGTCTTATCTTCTaGGACGGAGTCCTCATAGTGAGGGCAGAAAACATC +
Preference number: 6 (lower is better)
Translates to: HHVEDIALSLIF*DGVLIVRAENI
Trigger: GATGTTTTCTGCCCTCACTATGAGGACTCCGTCCCAGAAGATAAGACTGAGCGCTATGTCCTCTACATGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000333274.11
ENST00000504941.1
ENST00000505499.1
ENST00000509503.1
CDS CAA 72 bp ATAATGTCAAAAGCATCGCCAGGAGGAACAGTAGGATaGCCAAAAGGCGGCTGGGTATCCTTGGTGTTTGTG +
Preference number: 6 (lower is better)
Translates to: IMSKASPGGTVG*PKGGWVSLVFV
Trigger: CACAAACACCAAGGATACCCAGCCGCCTTTTGGCAATCCTACTGTTCCTCCTGGCGATGCTTTTGACATTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000333274.11
ENST00000509503.1
ENST00000510359.1
CDS CCA 72 bp GAGCTGGAATTTTTCAGAGAACTTCAGCGGTCCATTTaGAGAGTGAGGCCGGTTACATTCCCATCTCTTGAA +
Preference number: 6 (lower is better)
Translates to: ELEFFRELQRSI*RVRPVTFPSLE
Trigger: TTCAAGAGATGGGAATGTAACCGGCCTCACTCTCCAAATGGACCGCTGAAGTTCTCTGAAAAATTCCAGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333274.11
ENST00000504941.1
ENST00000505499.1
ENST00000509503.1
CDS TCA 72 bp AATTTTTCAGAGAACTTCAGCGGTCCATTTGGAGAGTaGGGCCGGTTACATTCCCATCTCTTGAACCCTTTG +
Preference number: 6 (lower is better)
Translates to: NFSENFSGPFGE*GRLHSHLLNPL
Trigger: CAAAGGGTTCAAGAGATGGGAATGTAACCGGCCTCACTCTCCAAATGGACCGCTGAAGTTCTCTGAAAAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000333274.11
ENST00000504941.1
ENST00000505499.1
ENST00000509503.1
CDS TCA 72 bp CATGTACGGTGTCATTTGTTGGTCTCACAAAGACTTTaGGCTTTAGACAGGACCTTCTTCCATTATCTGGGA +
Preference number: 6 (lower is better)
Translates to: HVRCHLLVSQRL*ALDRTFFHYLG
Trigger: TCCCAGATAATGGAAGAAGGTCCTGTCTAAAGCTCAAAGTCTTTGTGAGACCAACAAATGACACCGTACATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509503.1
CDS CAA 72 bp TCATGTACGGTGTCATTTGTTGGTCTCACAAAGACTTaGAGCTTTAGACAGGACCTTCTTCCATTATCTGGG +
Preference number: 6 (lower is better)
Translates to: SCTVSFVGLTKT*SFRQDLLPLSG
Trigger: CCCAGATAATGGAAGAAGGTCCTGTCTAAAGCTCAAAGTCTTTGTGAGACCAACAAATGACACCGTACATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000509503.1
CDS TCA 72 bp TTTTCATACAGCTATTTGTTGGTCTCACAAAGACTTTaGGCTTTAGACAGGACCTTCTTCCATTATCTGGGA +
Preference number: 6 (lower is better)
Translates to: FSYSYLLVSQRL*ALDRTFFHYLG
Trigger: TCCCAGATAATGGAAGAAGGTCCTGTCTAAAGCTCAAAGTCTTTGTGAGACCAACAAATAGCTGTATGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000333274.11
ENST00000510359.1