RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EFNA4 (Homo sapiens)

Ensembl gene IDs: ENSG00000243364

Ensembl transcript IDs: ENST00000359751.8, ENST00000368409.8, ENST00000427683.2

Found 183 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGCTGAGACCCTCAGAGCAGCCTGCAAAGCGCCTGTGTTTGTCTTaGCTCTGCTTCAGAGTGTCCAGGGCTGTCTACTGCTCTTCTTTA +
Preference number: 1 (lower is better)
Translates to: GLRPSEQPAKRLCLS*LCFRVSRAVYCSSL
Trigger: TAAAGAAGAGCAGTAGACAGCCCTGGACACTCTGAAGCAGAGGCAAGACAAACACAGGCGCTTTGCAGGCTGCTCTGAGGGTCTCAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359751.8
ENST00000368409.8
3UTR GCA 90 bp GCTGTCTACTGCTCTTCTTTAGCCTGTGATGAGGGGACAGGCTCCTaGAAGAGTCACCTCAGACCCTCTGATCTCCCCCATCAATGCTCC +
Preference number: 1 (lower is better)
Translates to: AVYCSSLACDEGTGS*KSHLRPSDLPHQCS
Trigger: GGAGCATTGATGGGGGAGATCAGAGGGTCTGAGGTGACTCTTGCAGGAGCCTGTCCCCTCATCACAGGCTAAAGAAGAGCAGTAGACAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368409.8
3UTR CCA 90 bp TGGCTTGAGGATTTGATCATACCAAATCCCAGTCCTCCTGGGGGATaGGCTGAGACCCTCAGAGCAGCCTGCAAAGCGCCTGTGTTTGTC +
Preference number: 1 (lower is better)
Translates to: WLEDLIIPNPSPPGG*AETLRAACKAPVFV
Trigger: GACAAACACAGGCGCTTTGCAGGCTGCTCTGAGGGTCTCAGCCCATCCCCCAGGAGGACTGGGATTTGGTATGATCAAATCCTCAAGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
3UTR GCA 90 bp CTGTGTTTGTCTTGCCTCTGCTTCAGAGTGTCCAGGGCTGTCTACTaGTCTTCTTTAGCCTGTGATGAGGGGACAGGCTCCTGCAAGAGT +
Preference number: 1 (lower is better)
Translates to: LCLSCLCFRVSRAVY*SSLACDEGTGSCKS
Trigger: ACTCTTGCAGGAGCCTGTCCCCTCATCACAGGCTAAAGAAGAGCAGTAGACAGCCCTGGACACTCTGAAGCAGAGGCAAGACAAACACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359751.8
ENST00000368409.8
3UTR-3UTR GCA 90 bp AGGGCACAGATGGCAGGGCTTCTTCTTTGCCCTGGTCCAGCAATCGACCTGTCCGGGAGGGCAAGGTGCTaGCCCAGGGAAAAGGCCCAC +
Preference number: 2 (lower is better)
Translates to: RAQMAGLLLCPGPAIDLSGRARC*PREKAH
Trigger: GTGGGCCTTTTCCCTGGGGCAGCACCTTGCCCTCCC...GGACAGGTCGATTGCTGGACCAGGGCAAAGAAGAAGCCCTGCCATCTGTGCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
3UTR-3UTR GCA 90 bp GATGGCAGGGCTTCTTCTTTGCCCTGGTCCAGCAATCGACCTGTCCCCAGGTCTGAGGGGACAGGCTCCTaGAAGAGTCACCTCAGACCC +
Preference number: 2 (lower is better)
Translates to: DGRASSLPWSSNRPVPRSEGTGS*KSHLRP
Trigger: GGGTCTGAGGTGACTCTTGCAGGAGCCTGTCCCCTC...AGACCTGGGGACAGGTCGATTGCTGGACCAGGGCAAAGAAGAAGCCCTGCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359751.8
ENST00000368409.8
3UTR-3UTR CCA 90 bp GCAGCCTGCAAAGCGCCTGTGTTTGTCTTGCCTCTGCTTCAGAGTGTCCAGGGCAGTCCTCCTGGGGGATaGGCTGAGACCCTCAGAGCA +
Preference number: 2 (lower is better)
Translates to: AACKAPVFVLPLLQSVQGSPPGG*AETLRA
Trigger: TGCTCTGAGGGTCTCAGCCCATCCCCCAGGAGGACT...GCCCTGGACACTCTGAAGCAGAGGCAAGACAAACACAGGCGCTTTGCAGGCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
3UTR CAA 90 bp GGGGATGGGCTGAGACCCTCAGAGCAGCCTGCAAAGCGCCTGTGTTaGTCTTGCCTCTGCTTCAGAGTGTCCAGGGCTGTCTACTGCTCT +
Preference number: 2 (lower is better)
Translates to: GDGLRPSEQPAKRLC*SCLCFRVSRAVYCS
Trigger: AGAGCAGTAGACAGCCCTGGACACTCTGAAGCAGAGGCAAGACAAACACAGGCGCTTTGCAGGCTGCTCTGAGGGTCTCAGCCCATCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
3UTR-3UTR CCA 90 bp GATGGCAGGGCTTCTTCTTTGCCCTGGTCCAGCAATCGACCTGTCCCCAGGTCTTCCTCCAGGGGATCTTaGGAGGACTCTGGCTCCTTG +
Preference number: 2 (lower is better)
Translates to: DGRASSLPWSSNRPVPRSSSRGS*EDSGSL
Trigger: CAAGGAGCCAGAGTCCTCCCAAGATCCCCTGGAGGA...AGACCTGGGGACAGGTCGATTGCTGGACCAGGGCAAAGAAGAAGCCCTGCCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368409.8
3UTR-3UTR TCA 90 bp CAGGGCACAGATGGCAGGGCTTCTTCTTTGCCCTGGTCCAGCAATCGACCTGTCTCACCTCAGACCCTCTaGTCTCCCCCATCAATGCTC +
Preference number: 2 (lower is better)
Translates to: QGTDGRASSLPWSSNRPVSPQTL*SPPSML
Trigger: GAGCATTGATGGGGGAGATCAGAGGGTCTGAGGTGA...GACAGGTCGATTGCTGGACCAGGGCAAAGAAGAAGCCCTGCCATCTGTGCCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368409.8
3UTR-3UTR GCA 90 bp GCAAAGCGCCTGTGTTTGTCTTGCCTCTGCTTCAGAGTGTCCAGGGCTGTCTACGAGGGGACAGGCTCCTaGAAGAGTCACCTCAGACCC +
Preference number: 2 (lower is better)
Translates to: AKRLCLSCLCFRVSRAVYEGTGS*KSHLRP
Trigger: GGGTCTGAGGTGACTCTTGCAGGAGCCTGTCCCCTC...GTAGACAGCCCTGGACACTCTGAAGCAGAGGCAAGACAAACACAGGCGCTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359751.8
ENST00000368409.8
3UTR-3UTR CCA 90 bp CCCAGCTGGCTTGAGGATTTGATCATACCAAATCCCAGTCCTCCTGGGGGATGGAGTCCTCCTGGGGGATaGGCTGAGACCCTCAGAGCA +
Preference number: 2 (lower is better)
Translates to: PSWLEDLIIPNPSPPGGWSPPGG*AETLRA
Trigger: TGCTCTGAGGGTCTCAGCCCATCCCCCAGGAGGACT...CCATCCCCCAGGAGGACTGGGATTTGGTATGATCAAATCCTCAAGCCAGCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
3UTR-3UTR CCA 90 bp CAGATGGCAGGGCTTCTTCTTTGCCCTGGTCCAGCAATCGACCTGTCCCCAGGTGCCTGGGCCCCCAGCTaGCTTGAGGATTTGATCATA +
Preference number: 2 (lower is better)
Translates to: QMAGLLLCPGPAIDLSPGAWAPS*LEDLII
Trigger: TATGATCAAATCCTCAAGCCAGCTGGGGGCCCAGGC...ACCTGGGGACAGGTCGATTGCTGGACCAGGGCAAAGAAGAAGCCCTGCCATCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
3UTR-3UTR TCA 90 bp CAGATGGCAGGGCTTCTTCTTTGCCCTGGTCCAGCAATCGACCTGTCCCCAGGTGGCCCCCAGCTGGCTTaGGGATTTGATCATACCAAA +
Preference number: 2 (lower is better)
Translates to: QMAGLLLCPGPAIDLSPGGPQLA*GFDHTK
Trigger: TTTGGTATGATCAAATCCTCAAGCCAGCTGGGGGCC...ACCTGGGGACAGGTCGATTGCTGGACCAGGGCAAAGAAGAAGCCCTGCCATCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
3UTR-3UTR TCA 90 bp CTGAGACCCTCAGAGCAGCCTGCAAAGCGCCTGTGTTTGTCTTGCCTCTGCTTCGGCCCCCAGCTGGCTTaGGGATTTGATCATACCAAA +
Preference number: 2 (lower is better)
Translates to: LRPSEQPAKRLCLSCLCFGPQLA*GFDHTK
Trigger: TTTGGTATGATCAAATCCTCAAGCCAGCTGGGGGCC...GAAGCAGAGGCAAGACAAACACAGGCGCTTTGCAGGCTGCTCTGAGGGTCTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
3UTR-3UTR GCA 90 bp GTCCGTCTTCATAGAAGACAAGTGAGTGATCCCCTGGGGAGGGCAAGGTGCTGCCGCCTGTGTTTGTCTTaGCTCTGCTTCAGAGTGTCC +
Preference number: 2 (lower is better)
Translates to: VRLHRRQVSDPLGRARCCRLCLS*LCFRVS
Trigger: GGACACTCTGAAGCAGAGGCAAGACAAACACAGGCG...GCAGCACCTTGCCCTCCCCAGGGGATCACTCACTTGTCTTCTATGAAGACGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
3UTR-3UTR CCA 90 bp ACCCTCAGAGCAGCCTGCAAAGCGCCTGTGTTTGTCTTGCCTCTGCTTCAGAGTAGGACTCTGGCTCCTTaGGATGAGAGGGAAGGTCTG +
Preference number: 2 (lower is better)
Translates to: TLRAACKAPVFVLPLLQSRTLAP*DEREGL
Trigger: CAGACCTTCCCTCTCATCCCAAGGAGCCAGAGTCCT...ACTCTGAAGCAGAGGCAAGACAAACACAGGCGCTTTGCAGGCTGCTCTGAGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368409.8
3UTR-3UTR TCA 90 bp CCCAGCTGGCTTGAGGATTTGATCATACCAAATCCCAGTCCTCCTGGGGGATGGGGCCCCCAGCTGGCTTaGGGATTTGATCATACCAAA +
Preference number: 2 (lower is better)
Translates to: PSWLEDLIIPNPSPPGGWGPQLA*GFDHTK
Trigger: TTTGGTATGATCAAATCCTCAAGCCAGCTGGGGGCC...CCATCCCCCAGGAGGACTGGGATTTGGTATGATCAAATCCTCAAGCCAGCTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
3UTR-3UTR GCA 90 bp AGATGGCAGGGCTTCTTCTTTGCCCTGGTCCAGCAATCGACCTGTCCCCAGGTCTCCAGGGCTGTCTACTaGTCTTCTTTAGCCTGTGAT +
Preference number: 2 (lower is better)
Translates to: RWQGFFFALVQQSTCPQVSRAVY*SSLACD
Trigger: ATCACAGGCTAAAGAAGAGCAGTAGACAGCCCTGGA...GACCTGGGGACAGGTCGATTGCTGGACCAGGGCAAAGAAGAAGCCCTGCCATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359751.8
ENST00000368409.8
3UTR-3UTR TCA 90 bp ACAGGGCACAGATGGCAGGGCTTCTTCTTTGCCCTGGTCCAGCAATCGACCTGTGCTGGCTTGAGGATTTaGTCATACCAAATCCCAGTC +
Preference number: 2 (lower is better)
Translates to: TGHRWQGFFFALVQQSTCAGLRI*SYQIPV
Trigger: GACTGGGATTTGGTATGATCAAATCCTCAAGCCAGC...ACAGGTCGATTGCTGGACCAGGGCAAAGAAGAAGCCCTGCCATCTGTGCCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
3UTR-3UTR GCA 90 bp TCAGAGCAGCCTGCAAAGCGCCTGTGTTTGTCTTGCCTCTGCTTCAGAGTGTCCTGTTTGTCTTGCCTCTaGTTCAGAGTGTCCAGGGCT +
Preference number: 2 (lower is better)
Translates to: SEQPAKRLCLSCLCFRVSCLSCL*FRVSRA
Trigger: AGCCCTGGACACTCTGAAGCAGAGGCAAGACAAACA...GGACACTCTGAAGCAGAGGCAAGACAAACACAGGCGCTTTGCAGGCTGCTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
3UTR-3UTR CCA 90 bp AATACAAACTGGCATGAAATTCAACCTCATGAAGAGTCCGTCTTCATAGAAGACGCCTGGGCCCCCAGCTaGCTTGAGGATTTGATCATA +
Preference number: 2 (lower is better)
Translates to: NTNWHEIQPHEESVFIEDAWAPS*LEDLII
Trigger: TATGATCAAATCCTCAAGCCAGCTGGGGGCCCAGGC...GTCTTCTATGAAGACGGACTCTTCATGAGGTTGAATTTCATGCCAGTTTGTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
3UTR-3UTR GCA 90 bp AAAAATACAAACTGGCATGAAATTCAACCTCATGAAGAGTCCGTCTTCATAGAAGCAGGGCTTCTTCTTTaGCCTGGTCCAGCAATCGAC +
Preference number: 2 (lower is better)
Translates to: KNTNWHEIQPHEESVFIEAGLLL*PGPAID
Trigger: GTCGATTGCTGGACCAGGGCAAAGAAGAAGCCCTGC...TTCTATGAAGACGGACTCTTCATGAGGTTGAATTTCATGCCAGTTTGTATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
3UTR GCA 72 bp ATGCTCCATCTTGTCGGTCTGAATTGGCACCCCCAGTaGAGGCAGCAGGGATCCCTCCTCCTCCAGGGGATC +
Preference number: 3 (lower is better)
Translates to: MLHLVGLNWHPQ*RQQGSLLLQGI
Trigger: GATCCCCTGGAGGAGGAGGGATCCCTGCTGCCTGCACTGGGGGTGCCAATTCAGACCGACAAGATGGAGCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368409.8
3UTR TCA 72 bp GGTCTTCAGCCTGGGCCCCCAGCTGGCTTGAGGATTTaGTCATACCAAATCCCAGTCCTCCTGGGGGATGGG +
Preference number: 3 (lower is better)
Translates to: GLQPGPPAGLRI*SYQIPVLLGDG
Trigger: CCCATCCCCCAGGAGGACTGGGATTTGGTATGATCAAATCCTCAAGCCAGCTGGGGGCCCAGGCTGAAGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
3UTR-3UTR CAA 90 bp AGATGGCAGGGCTTCTTCTTTGCCCTGGTCCAGCAATCGACCTGTCCCCAGGTCTCTTGTCGGTCTGAATaGGCACCCCCAGTGCAGGCA +
Preference number: 3 (lower is better)
Translates to: RWQGFFFALVQQSTCPQVSCRSE*APPVQA
Trigger: TGCCTGCACTGGGGGTGCCAATTCAGACCGACAAGA...GACCTGGGGACAGGTCGATTGCTGGACCAGGGCAAAGAAGAAGCCCTGCCATCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368409.8
3UTR-3UTR CAA 90 bp GCAGCCTGCAAAGCGCCTGTGTTTGTCTTGCCTCTGCTTCAGAGTGTCCAGGGCGCGCCTGTGTTTGTCTaGCCTCTGCTTCAGAGTGTC +
Preference number: 3 (lower is better)
Translates to: AACKAPVFVLPLLQSVQGAPVFV*PLLQSV
Trigger: GACACTCTGAAGCAGAGGCAAGACAAACACAGGCGC...GCCCTGGACACTCTGAAGCAGAGGCAAGACAAACACAGGCGCTTTGCAGGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
3UTR TCA 72 bp TCTGATCTCCCCCATCAATGCTCCATCTTGTCGGTCTaGATTGGCACCCCCAGTGCAGGCAGCAGGGATCCC +
Preference number: 3 (lower is better)
Translates to: SDLPHQCSILSV*IGTPSAGSRDP
Trigger: GGGATCCCTGCTGCCTGCACTGGGGGTGCCAATTCAGACCGACAAGATGGAGCATTGATGGGGGAGATCAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368409.8
3UTR GCA 72 bp CCCTCAGAGCAGCCTGCAAAGCGCCTGTGTTTGTCTTaGCTCTGCTTCAGAGTGTCCAGGGCTGTCTACTGC +
Preference number: 3 (lower is better)
Translates to: PSEQPAKRLCLS*LCFRVSRAVYC
Trigger: GCAGTAGACAGCCCTGGACACTCTGAAGCAGAGGCAAGACAAACACAGGCGCTTTGCAGGCTGCTCTGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
3UTR CCA 72 bp GATTTGATCATACCAAATCCCAGTCCTCCTGGGGGATaGGCTGAGACCCTCAGAGCAGCCTGCAAAGCGCCT +
Preference number: 3 (lower is better)
Translates to: DLIIPNPSPPGG*AETLRAACKAP
Trigger: AGGCGCTTTGCAGGCTGCTCTGAGGGTCTCAGCCCATCCCCCAGGAGGACTGGGATTTGGTATGATCAAATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
3UTR GCA 72 bp TCTTGCCTCTGCTTCAGAGTGTCCAGGGCTGTCTACTaGTCTTCTTTAGCCTGTGATGAGGGGACAGGCTCC +
Preference number: 3 (lower is better)
Translates to: SCLCFRVSRAVY*SSLACDEGTGS
Trigger: GGAGCCTGTCCCCTCATCACAGGCTAAAGAAGAGCAGTAGACAGCCCTGGACACTCTGAAGCAGAGGCAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359751.8
ENST00000368409.8
3UTR GCA 72 bp TGCTCTTCTTTAGCCTGTGATGAGGGGACAGGCTCCTaGAAGAGTCACCTCAGACCCTCTGATCTCCCCCAT +
Preference number: 3 (lower is better)
Translates to: CSSLACDEGTGS*KSHLRPSDLPH
Trigger: ATGGGGGAGATCAGAGGGTCTGAGGTGACTCTTGCAGGAGCCTGTCCCCTCATCACAGGCTAAAGAAGAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368409.8
3UTR-3UTR CAA 90 bp CTGAGACCCTCAGAGCAGCCTGCAAAGCGCCTGTGTTTGTCTTGCCTCTGCTTCAGCTGGCTTGAGGATTaGATCATACCAAATCCCAGT +
Preference number: 3 (lower is better)
Translates to: LRPSEQPAKRLCLSCLCFSWLED*IIPNPS
Trigger: ACTGGGATTTGGTATGATCAAATCCTCAAGCCAGCT...GAAGCAGAGGCAAGACAAACACAGGCGCTTTGCAGGCTGCTCTGAGGGTCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
3UTR-3UTR CAA 90 bp AAAAATACAAACTGGCATGAAATTCAACCTCATGAAGAGTCCGTCTTCATAGAACTCCTCCAGGGGATCTaGGGAGGACTCTGGCTCCTT +
Preference number: 3 (lower is better)
Translates to: KNTNWHEIQPHEESVFIELLQGI*GGLWLL
Trigger: AAGGAGCCAGAGTCCTCCCAAGATCCCCTGGAGGAG...TTCTATGAAGACGGACTCTTCATGAGGTTGAATTTCATGCCAGTTTGTATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368409.8
CDS-3UTR CCA 90 bp GGGGGATGGGCTGAGACCCTCAGAGCAGCCTGCAAAGCGCCTGTGTTTGTCTTGCTACGTGGCGGAGGCTaGAGCCCCCGCGCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: GGWAETLRAACKAPVFVLLRGGG*SPRAEG
Trigger: CCCCTCTGCGCGGGGGCTCCAGCCTCCGCCACGTAG...CAAGACAAACACAGGCGCTTTGCAGGCTGCTCTGAGGGTCTCAGCCCATCCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR GCA 90 bp GGGGGATGGGCTGAGACCCTCAGAGCAGCCTGCAAAGCGCCTGTGTTTGTCTTGGGCCCGGGGGCCCTCTaGCTGGCAGGACTCATAGCC +
Preference number: 4 (lower is better)
Translates to: GGWAETLRAACKAPVFVLGPGAL*LAGLIA
Trigger: GGCTATGAGTCCTGCCAGGCAGAGGGCCCCCGGGCC...CAAGACAAACACAGGCGCTTTGCAGGCTGCTCTGAGGGTCTCAGCCCATCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR CCA 90 bp TGGGCTGAGACCCTCAGAGCAGCCTGCAAAGCGCCTGTGTTTGTCTTGCCTCTGCTACGTGGCGGAGGCTaGAGCCCCCGCGCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: WAETLRAACKAPVFVLPLLRGGG*SPRAEG
Trigger: CCCCTCTGCGCGGGGGCTCCAGCCTCCGCCACGTAG...CAGAGGCAAGACAAACACAGGCGCTTTGCAGGCTGCTCTGAGGGTCTCAGCCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR CCA 90 bp CAGGGCACAGATGGCAGGGCTTCTTCTTTGCCCTGGTCCAGCAATCGACCTGTCCTACGTGGCGGAGGCTaGAGCCCCCGCGCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: QGTDGRASSLPWSSNRPVLRGGG*SPRAEG
Trigger: CCCCTCTGCGCGGGGGCTCCAGCCTCCGCCACGTAG...GACAGGTCGATTGCTGGACCAGGGCAAAGAAGAAGCCCTGCCATCTGTGCCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR GCA 90 bp CAGGGCACAGATGGCAGGGCTTCTTCTTTGCCCTGGTCCAGCAATCGACCTGTCGGCCCGGGGGCCCTCTaGCTGGCAGGACTCATAGCC +
Preference number: 4 (lower is better)
Translates to: QGTDGRASSLPWSSNRPVGPGAL*LAGLIA
Trigger: GGCTATGAGTCCTGCCAGGCAGAGGGCCCCCGGGCC...GACAGGTCGATTGCTGGACCAGGGCAAAGAAGAAGCCCTGCCATCTGTGCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR GCA 90 bp CAGATGGCAGGGCTTCTTCTTTGCCCTGGTCCAGCAATCGACCTGTCCCCAGGTGGCCCGGGGGCCCTCTaGCTGGCAGGACTCATAGCC +
Preference number: 4 (lower is better)
Translates to: QMAGLLLCPGPAIDLSPGGPGAL*LAGLIA
Trigger: GGCTATGAGTCCTGCCAGGCAGAGGGCCCCCGGGCC...ACCTGGGGACAGGTCGATTGCTGGACCAGGGCAAAGAAGAAGCCCTGCCATCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR CCA 90 bp AGGGCACAGATGGCAGGGCTTCTTCTTTGCCCTGGTCCAGCAATCGACCTGTCCGCCCTCAGGGGGCCCTaGGCCTTCGTAGTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: RAQMAGLLLCPGPAIDLSALRGP*AFVVGA
Trigger: TGCCCCCACTACGAAGGCCCAGGGCCCCCTGAGGGC...GGACAGGTCGATTGCTGGACCAGGGCAAAGAAGAAGCCCTGCCATCTGTGCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR CCA 90 bp CAGATGGCAGGGCTTCTTCTTTGCCCTGGTCCAGCAATCGACCTGTCCCCAGGTGCCCTCAGGGGGCCCTaGGCCTTCGTAGTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: QMAGLLLCPGPAIDLSPGALRGP*AFVVGA
Trigger: TGCCCCCACTACGAAGGCCCAGGGCCCCCTGAGGGC...ACCTGGGGACAGGTCGATTGCTGGACCAGGGCAAAGAAGAAGCCCTGCCATCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR CCA 90 bp GCAGGGATCCCTCCTCCTCCAGGGGATCTTGGGAGGACTCTGGCTCCTTGGGATCCCAGGTCTTCAGCCTaGGCCCCCAGCTGGCTTGAG +
Preference number: 4 (lower is better)
Translates to: AGIPPPPGDLGRTLAPWDPRSSA*APSWLE
Trigger: CTCAAGCCAGCTGGGGGCCCAGGCTGAAGACCTGGG...ATCCCAAGGAGCCAGAGTCCTCCCAAGATCCCCTGGAGGAGGAGGGATCCCTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368409.8
CDS-3UTR CCA 90 bp GCAGCCTGCAAAGCGCCTGTGTTTGTCTTGCCTCTGCTTCAGAGTGTCCAGGGCCGGTTTGGTCTGGCCTaGCAGGTCCCGGCCCGCTTC +
Preference number: 4 (lower is better)
Translates to: AACKAPVFVLPLLQSVQGRFGLA*QVPARF
Trigger: GAAGCGGGCCGGGACCTGCCAGGCCAGACCAAACCG...GCCCTGGACACTCTGAAGCAGAGGCAAGACAAACACAGGCGCTTTGCAGGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR CCA 90 bp GCACAGATGGCAGGGCTTCTTCTTTGCCCTGGTCCAGCAATCGACCTGTCCCCACGGTTTGGTCTGGCCTaGCAGGTCCCGGCCCGCTTC +
Preference number: 4 (lower is better)
Translates to: AQMAGLLLCPGPAIDLSPRFGLA*QVPARF
Trigger: GAAGCGGGCCGGGACCTGCCAGGCCAGACCAAACCG...TGGGGACAGGTCGATTGCTGGACCAGGGCAAAGAAGAAGCCCTGCCATCTGTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR CCA 90 bp GATGGCAGGGCTTCTTCTTTGCCCTGGTCCAGCAATCGACCTGTCCCCAGGTCTCCCCGAGGTCCGGTTTaGTCTGGCCTGGCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: DGRASSLPWSSNRPVPRSPRGPV*SGLAGP
Trigger: GGGACCTGCCAGGCCAGACCAAACCGGACCTCGGGG...AGACCTGGGGACAGGTCGATTGCTGGACCAGGGCAAAGAAGAAGCCCTGCCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR CCA 90 bp GGGGGATGGGCTGAGACCCTCAGAGCAGCCTGCAAAGCGCCTGTGTTTGTCTTGCCCAGGTCTTCAGCCTaGGCCCCCAGCTGGCTTGAG +
Preference number: 4 (lower is better)
Translates to: GGWAETLRAACKAPVFVLPRSSA*APSWLE
Trigger: CTCAAGCCAGCTGGGGGCCCAGGCTGAAGACCTGGG...CAAGACAAACACAGGCGCTTTGCAGGCTGCTCTGAGGGTCTCAGCCCATCCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR CCA 90 bp GACCCTCAGAGCAGCCTGCAAAGCGCCTGTGTTTGTCTTGCCTCTGCTTCAGAGAGGTCCGGTTTGGTCTaGCCTGGCAGGTCCCGGCCC +
Preference number: 4 (lower is better)
Translates to: DPQSSLQSACVCLASASERSGLV*PGRSRP
Trigger: GGGCCGGGACCTGCCAGGCCAGACCAAACCGGACCT...CTCTGAAGCAGAGGCAAGACAAACACAGGCGCTTTGCAGGCTGCTCTGAGGGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR CCA 90 bp GAGCAGCCTGCAAAGCGCCTGTGTTTGTCTTGCCTCTGCTTCAGAGTGTCCAGGCCCCGAGGTCCGGTTTaGTCTGGCCTGGCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: EQPAKRLCLSCLCFRVSRPRGPV*SGLAGP
Trigger: GGGACCTGCCAGGCCAGACCAAACCGGACCTCGGGG...CCTGGACACTCTGAAGCAGAGGCAAGACAAACACAGGCGCTTTGCAGGCTGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR CCA 90 bp ACCCTCAGAGCAGCCTGCAAAGCGCCTGTGTTTGTCTTGCCTCTGCTTCAGAGTGCCCTCAGGGGGCCCTaGGCCTTCGTAGTGGGGGCA +
Preference number: 4 (lower is better)
Translates to: TLRAACKAPVFVLPLLQSALRGP*AFVVGA
Trigger: TGCCCCCACTACGAAGGCCCAGGGCCCCCTGAGGGC...ACTCTGAAGCAGAGGCAAGACAAACACAGGCGCTTTGCAGGCTGCTCTGAGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR GCA 90 bp GACCCTCAGAGCAGCCTGCAAAGCGCCTGTGTTTGTCTTGCCTCTGCTTCAGAGGGGAGGGCAAGGTGCTaGCCCAGGGAAAAGGCCCAC +
Preference number: 4 (lower is better)
Translates to: DPQSSLQSACVCLASASEGRARC*PREKAH
Trigger: GTGGGCCTTTTCCCTGGGGCAGCACCTTGCCCTCCC...CTCTGAAGCAGAGGCAAGACAAACACAGGCGCTTTGCAGGCTGCTCTGAGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR GCA 90 bp CTGAGACCCTCAGAGCAGCCTGCAAAGCGCCTGTGTTTGTCTTGCCTCTGCTTCGGGAGGGCAAGGTGCTaGCCCAGGGAAAAGGCCCAC +
Preference number: 4 (lower is better)
Translates to: LRPSEQPAKRLCLSCLCFGRARC*PREKAH
Trigger: GTGGGCCTTTTCCCTGGGGCAGCACCTTGCCCTCCC...GAAGCAGAGGCAAGACAAACACAGGCGCTTTGCAGGCTGCTCTGAGGGTCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR GCA 90 bp GAGCAGCCTGCAAAGCGCCTGTGTTTGTCTTGCCTCTGCTTCAGAGTGTCCAGGGGGAGGGCAAGGTGCTaGCCCAGGGAAAAGGCCCAC +
Preference number: 4 (lower is better)
Translates to: EQPAKRLCLSCLCFRVSRGRARC*PREKAH
Trigger: GTGGGCCTTTTCCCTGGGGCAGCACCTTGCCCTCCC...CCTGGACACTCTGAAGCAGAGGCAAGACAAACACAGGCGCTTTGCAGGCTGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR CCA 90 bp GCAAAGCGCCTGTGTTTGTCTTGCCTCTGCTTCAGAGTGTCCAGGGCTGTCTACAGGTCCGGTTTGGTCTaGCCTGGCAGGTCCCGGCCC +
Preference number: 4 (lower is better)
Translates to: AKRLCLSCLCFRVSRAVYRSGLV*PGRSRP
Trigger: GGGCCGGGACCTGCCAGGCCAGACCAAACCGGACCT...GTAGACAGCCCTGGACACTCTGAAGCAGAGGCAAGACAAACACAGGCGCTTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR CCA 90 bp CAAAGCGCCTGTGTTTGTCTTGCCTCTGCTTCAGAGTGTCCAGGGCTGTCTACTCCCCGAGGTCCGGTTTaGTCTGGCCTGGCAGGTCCC +
Preference number: 4 (lower is better)
Translates to: QSACVCLASASECPGLSTPRGPV*SGLAGP
Trigger: GGGACCTGCCAGGCCAGACCAAACCGGACCTCGGGG...AGTAGACAGCCCTGGACACTCTGAAGCAGAGGCAAGACAAACACAGGCGCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR CCA 90 bp TGGGCTGAGACCCTCAGAGCAGCCTGCAAAGCGCCTGTGTTTGTCTTGCCTCTGAGTCCTCCTGGGGGATaGGCTGAGACCCTCAGAGCA +
Preference number: 4 (lower is better)
Translates to: WAETLRAACKAPVFVLPLSPPGG*AETLRA
Trigger: TGCTCTGAGGGTCTCAGCCCATCCCCCAGGAGGACT...CAGAGGCAAGACAAACACAGGCGCTTTGCAGGCTGCTCTGAGGGTCTCAGCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR CCA 90 bp ACCCTCAGAGCAGCCTGCAAAGCGCCTGTGTTTGTCTTGCCTCTGCTTCAGAGTCCCAGGTCTTCAGCCTaGGCCCCCAGCTGGCTTGAG +
Preference number: 4 (lower is better)
Translates to: TLRAACKAPVFVLPLLQSPRSSA*APSWLE
Trigger: CTCAAGCCAGCTGGGGGCCCAGGCTGAAGACCTGGG...ACTCTGAAGCAGAGGCAAGACAAACACAGGCGCTTTGCAGGCTGCTCTGAGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR TCA 90 bp AGGGCACAGATGGCAGGGCTTCTTCTTTGCCCTGGTCCAGCAATCGACCTGTCCTGTCTAGGTAATCGTTaGGGCCCAGCTCCACCACGG +
Preference number: 4 (lower is better)
Translates to: RAQMAGLLLCPGPAIDLSCLGNR*GPAPPR
Trigger: CCGTGGTGGAGCTGGGCCTCAACGATTACCTAGACA...GGACAGGTCGATTGCTGGACCAGGGCAAAGAAGAAGCCCTGCCATCTGTGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR GCA 90 bp GACCCTCAGAGCAGCCTGCAAAGCGCCTGTGTTTGTCTTGCCTCTGCTTCAGAGGAGGGGACAGGCTCCTaGAAGAGTCACCTCAGACCC +
Preference number: 4 (lower is better)
Translates to: DPQSSLQSACVCLASASEEGTGS*KSHLRP
Trigger: GGGTCTGAGGTGACTCTTGCAGGAGCCTGTCCCCTC...CTCTGAAGCAGAGGCAAGACAAACACAGGCGCTTTGCAGGCTGCTCTGAGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR GCA 90 bp CTCCATCTTGTCGGTCTGAATTGGCACCCCCAGTGCAGGCAGCAGGGATCCCTCACCCTCAGAGCAGCCTaGAAAGCGCCTGTGTTTGTC +
Preference number: 4 (lower is better)
Translates to: LHLVGLNWHPQCRQQGSLTLRAA*KAPVFV
Trigger: GACAAACACAGGCGCTTTGCAGGCTGCTCTGAGGGT...GAGGGATCCCTGCTGCCTGCACTGGGGGTGCCAATTCAGACCGACAAGATGGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368409.8
CDS-3UTR CCA 90 bp TCCCTCCTCCTCCAGGGGATCTTGGGAGGACTCTGGCTCCTTGGGATGAGAGGGCTCCTCGAAGCAACCTaGGGTTACTGGAGTTCCAGT +
Preference number: 4 (lower is better)
Translates to: SLLLQGILGGLWLLGMRGLLEAT*GYWSSS
Trigger: ACTGGAACTCCAGTAACCCCAGGTTGCTTCGAGGAG...CCCTCTCATCCCAAGGAGCCAGAGTCCTCCCAAGATCCCCTGGAGGAGGAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368409.8
CDS-3UTR CCA 90 bp AGATGGCAGGGCTTCTTCTTTGCCCTGGTCCAGCAATCGACCTGTCCCCAGGTCCAGCAGACAGACACCTaGAGCCTCAAGCACTGGCCA +
Preference number: 4 (lower is better)
Translates to: RWQGFFFALVQQSTCPQVQQTDT*SLKHWP
Trigger: TGGCCAGTGCTTGAGGCTCCAGGTGTCTGTCTGCTG...GACCTGGGGACAGGTCGATTGCTGGACCAGGGCAAAGAAGAAGCCCTGCCATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR CCA 90 bp ACAGATGGCAGGGCTTCTTCTTTGCCCTGGTCCAGCAATCGACCTGTCCCCAGGCTTGTCGGTCTGAATTaGCACCCCCAGTGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: TDGRASSLPWSSNRPVPRLVGLN*HPQCRQ
Trigger: CTGCCTGCACTGGGGGTGCCAATTCAGACCGACAAG...CCTGGGGACAGGTCGATTGCTGGACCAGGGCAAAGAAGAAGCCCTGCCATCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR CCA 90 bp GCACAGATGGCAGGGCTTCTTCTTTGCCCTGGTCCAGCAATCGACCTGTCCCCACTTGTCGGTCTGAATTaGCACCCCCAGTGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: AQMAGLLLCPGPAIDLSPLVGLN*HPQCRQ
Trigger: CTGCCTGCACTGGGGGTGCCAATTCAGACCGACAAG...TGGGGACAGGTCGATTGCTGGACCAGGGCAAAGAAGAAGCCCTGCCATCTGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR CCA 90 bp GCAGGGATCCCTCCTCCTCCAGGGGATCTTGGGAGGACTCTGGCTCCTTGGGATGCTTCTTCTTTGCCCTaGTCCAGCAATCGACCTGTC +
Preference number: 4 (lower is better)
Translates to: AGIPPPPGDLGRTLAPWDASSLP*SSNRPV
Trigger: GACAGGTCGATTGCTGGACCAGGGCAAAGAAGAAGC...ATCCCAAGGAGCCAGAGTCCTCCCAAGATCCCCTGGAGGAGGAGGGATCCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368409.8
CDS-3UTR CCA 90 bp CAGATGGCAGGGCTTCTTCTTTGCCCTGGTCCAGCAATCGACCTGTCCCCAGGTCCCACAGGGCACAGATaGCAGGGCTTCTTCTTTGCC +
Preference number: 4 (lower is better)
Translates to: QMAGLLLCPGPAIDLSPGPTGHR*QGFFFA
Trigger: GGCAAAGAAGAAGCCCTGCCATCTGTGCCCTGTGGG...ACCTGGGGACAGGTCGATTGCTGGACCAGGGCAAAGAAGAAGCCCTGCCATCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR CCA 90 bp GCAGCCTGCAAAGCGCCTGTGTTTGTCTTGCCTCTGCTTCAGAGTGTCCAGGGCCCCACAGGGCACAGATaGCAGGGCTTCTTCTTTGCC +
Preference number: 4 (lower is better)
Translates to: AACKAPVFVLPLLQSVQGPTGHR*QGFFFA
Trigger: GGCAAAGAAGAAGCCCTGCCATCTGTGCCCTGTGGG...GCCCTGGACACTCTGAAGCAGAGGCAAGACAAACACAGGCGCTTTGCAGGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR TCA 90 bp GAGCAGCCTGCAAAGCGCCTGTGTTTGTCTTGCCTCTGCTTCAGAGTGTCCAGGTGTCTAGGTAATCGTTaGGGCCCAGCTCCACCACGG +
Preference number: 4 (lower is better)
Translates to: EQPAKRLCLSCLCFRVSRCLGNR*GPAPPR
Trigger: CCGTGGTGGAGCTGGGCCTCAACGATTACCTAGACA...CCTGGACACTCTGAAGCAGAGGCAAGACAAACACAGGCGCTTTGCAGGCTGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR TCA 90 bp CAGATGGCAGGGCTTCTTCTTTGCCCTGGTCCAGCAATCGACCTGTCCCCAGGTCGAGGGAGAAGGGTGTaGAGCGCTGAATCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: QMAGLLLCPGPAIDLSPGRGRRV*SAESSL
Trigger: CAGAGAAGATTCAGCGCTTCACACCCTTCTCCCTCG...ACCTGGGGACAGGTCGATTGCTGGACCAGGGCAAAGAAGAAGCCCTGCCATCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR TCA 90 bp AGATGGCAGGGCTTCTTCTTTGCCCTGGTCCAGCAATCGACCTGTCCCCAGGTCCGAGGGAGAAGGGTGTaGAGCGCTGAATCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: RWQGFFFALVQQSTCPQVRGRRV*SAESSL
Trigger: CAGAGAAGATTCAGCGCTTCACACCCTTCTCCCTCG...GACCTGGGGACAGGTCGATTGCTGGACCAGGGCAAAGAAGAAGCCCTGCCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR TCA 90 bp GATGGCAGGGCTTCTTCTTTGCCCTGGTCCAGCAATCGACCTGTCCCCAGGTCTCCCAACAGGATGGGCTaGCTCAGACTTCCTCTCCTT +
Preference number: 4 (lower is better)
Translates to: DGRASSLPWSSNRPVPRSPNRMG*LRLPLL
Trigger: AAGGAGAGGAAGTCTGAGTCAGCCCATCCTGTTGGG...AGACCTGGGGACAGGTCGATTGCTGGACCAGGGCAAAGAAGAAGCCCTGCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368409.8
CDS-3UTR TCA 90 bp ACAGGGCACAGATGGCAGGGCTTCTTCTTTGCCCTGGTCCAGCAATCGACCTGTTCTGGCTCCTTGGGATaGGAGGGAAGGTCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: TGHRWQGFFFALVQQSTCSGSLG*EGRSAW
Trigger: CCAAGCAGACCTTCCCTCTCATCCCAAGGAGCCAGA...ACAGGTCGATTGCTGGACCAGGGCAAAGAAGAAGCCCTGCCATCTGTGCCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368409.8
CDS-3UTR GCA 90 bp TCAGAGCAGCCTGCAAAGCGCCTGTGTTTGTCTTGCCTCTGCTTCAGAGTGTCCGAGGGGACAGGCTCCTaGAAGAGTCACCTCAGACCC +
Preference number: 4 (lower is better)
Translates to: SEQPAKRLCLSCLCFRVSEGTGS*KSHLRP
Trigger: GGGTCTGAGGTGACTCTTGCAGGAGCCTGTCCCCTC...GGACACTCTGAAGCAGAGGCAAGACAAACACAGGCGCTTTGCAGGCTGCTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR GCA 90 bp GCAGCCTGCAAAGCGCCTGTGTTTGTCTTGCCTCTGCTTCAGAGTGTCCAGGGCACCCTCAGAGCAGCCTaGAAAGCGCCTGTGTTTGTC +
Preference number: 4 (lower is better)
Translates to: AACKAPVFVLPLLQSVQGTLRAA*KAPVFV
Trigger: GACAAACACAGGCGCTTTGCAGGCTGCTCTGAGGGT...GCCCTGGACACTCTGAAGCAGAGGCAAGACAAACACAGGCGCTTTGCAGGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR GCA 90 bp TGGGCTGAGACCCTCAGAGCAGCCTGCAAAGCGCCTGTGTTTGTCTTGCCTCTGGCAGGGCTTCTTCTTTaGCCTGGTCCAGCAATCGAC +
Preference number: 4 (lower is better)
Translates to: WAETLRAACKAPVFVLPLAGLLL*PGPAID
Trigger: GTCGATTGCTGGACCAGGGCAAAGAAGAAGCCCTGC...CAGAGGCAAGACAAACACAGGCGCTTTGCAGGCTGCTCTGAGGGTCTCAGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR GCA 90 bp GGGGGATGGGCTGAGACCCTCAGAGCAGCCTGCAAAGCGCCTGTGTTTGTCTTGCAGACTTCCTCTCCTTaGAGCAGACAGACACCTGGA +
Preference number: 4 (lower is better)
Translates to: GGWAETLRAACKAPVFVLQTSSP*SRQTPG
Trigger: TCCAGGTGTCTGTCTGCTGCAAGGAGAGGAAGTCTG...CAAGACAAACACAGGCGCTTTGCAGGCTGCTCTGAGGGTCTCAGCCCATCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368409.8
CDS-3UTR GCA 90 bp AGAGTCACCTCAGACCCTCTGATCTCCCCCATCAATGCTCCATCTTGTCGGTCTCTCGCCACCCTGATGTaGCACTCTCTCCAGGGCTCC +
Preference number: 4 (lower is better)
Translates to: RVTSDPLISPINAPSCRSLATLM*HSLQGS
Trigger: GGAGCCCTGGAGAGAGTGGCACATCAGGGTGGCGAG...AGACCGACAAGATGGAGCATTGATGGGGGAGATCAGAGGGTCTGAGGTGACTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368409.8
CDS-3UTR CCA 90 bp GGGGGATGGGCTGAGACCCTCAGAGCAGCCTGCAAAGCGCCTGTGTTTGTCTTGGCAGGACTCATAGCCTaGCCAGTCCACCATGTACAA +
Preference number: 4 (lower is better)
Translates to: GGWAETLRAACKAPVFVLAGLIA*PVHHVQ
Trigger: TTGTACATGGTGGACTGGCCAGGCTATGAGTCCTGC...CAAGACAAACACAGGCGCTTTGCAGGCTGCTCTGAGGGTCTCAGCCCATCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR CCA 90 bp AGCCTGCAAAGCGCCTGTGTTTGTCTTGCCTCTGCTTCAGAGTGTCCAGGGCTGCAGCAGACAGACACCTaGAGCCTCAAGCACTGGCCA +
Preference number: 4 (lower is better)
Translates to: SLQSACVCLASASECPGLQQTDT*SLKHWP
Trigger: TGGCCAGTGCTTGAGGCTCCAGGTGTCTGTCTGCTG...CAGCCCTGGACACTCTGAAGCAGAGGCAAGACAAACACAGGCGCTTTGCAGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR CCA 90 bp GCAGCCTGCAAAGCGCCTGTGTTTGTCTTGCCTCTGCTTCAGAGTGTCCAGGGCATCTTGGGAGGACTCTaGCTCCTTGGGATGAGAGGG +
Preference number: 4 (lower is better)
Translates to: AACKAPVFVLPLLQSVQGILGGL*LLGMRG
Trigger: CCCTCTCATCCCAAGGAGCCAGAGTCCTCCCAAGAT...GCCCTGGACACTCTGAAGCAGAGGCAAGACAAACACAGGCGCTTTGCAGGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359751.8
ENST00000368409.8
CDS-3UTR CCA 90 bp AGAGTCCGTCTTCATAGAAGACAAGTGAGTGATCCCCTGGGGAGGGCAAGGTGCAGTCCTCCTGGGGGATaGGCTGAGACCCTCAGAGCA +
Preference number: 4 (lower is better)
Translates to: RVRLHRRQVSDPLGRARCSPPGG*AETLRA
Trigger: TGCTCTGAGGGTCTCAGCCCATCCCCCAGGAGGACT...GCACCTTGCCCTCCCCAGGGGATCACTCACTTGTCTTCTATGAAGACGGACTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR CCA 90 bp AGCAGCCTGCAAAGCGCCTGTGTTTGTCTTGCCTCTGCTTCAGAGTGTCCAGGGTCCTCCAGGGGATCTTaGGAGGACTCTGGCTCTCCT +
Preference number: 4 (lower is better)
Translates to: SSLQSACVCLASASECPGSSRGS*EDSGSP
Trigger: AGGAGAGCCAGAGTCCTCCCAAGATCCCCTGGAGGA...CCCTGGACACTCTGAAGCAGAGGCAAGACAAACACAGGCGCTTTGCAGGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427683.2
3UTR CAA 72 bp AGGTCTTCAGCCTGGGCCCCCAGCTGGCTTGAGGATTaGATCATACCAAATCCCAGTCCTCCTGGGGGATGG +
Preference number: 4 (lower is better)
Translates to: RSSAWAPSWLED*IIPNPSPPGGW
Trigger: CCATCCCCCAGGAGGACTGGGATTTGGTATGATCAAATCCTCAAGCCAGCTGGGGGCCCAGGCTGAAGACCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR TCA 90 bp CTGAGACCCTCAGAGCAGCCTGCAAAGCGCCTGTGTTTGTCTTGCCTCTGCTTCCGAGGGAGAAGGGTGTaGAGCGCTGAATCTTCTCTG +
Preference number: 4 (lower is better)
Translates to: LRPSEQPAKRLCLSCLCFRGRRV*SAESSL
Trigger: CAGAGAAGATTCAGCGCTTCACACCCTTCTCCCTCG...GAAGCAGAGGCAAGACAAACACAGGCGCTTTGCAGGCTGCTCTGAGGGTCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR TCA 90 bp CCCAGCTGGCTTGAGGATTTGATCATACCAAATCCCAGTCCTCCTGGGGGATGGTCTGGCTCCTTGGGATaGGAGGGAAGGTTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: PSWLEDLIIPNPSPPGGWSGSLG*EGRFLS
Trigger: GGAGAGGAACCTTCCCTCTCATCCCAAGGAGCCAGA...CCATCCCCCAGGAGGACTGGGATTTGGTATGATCAAATCCTCAAGCCAGCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359751.8
CDS-3UTR TCA 90 bp TGGGCCCCCAGCTGGCTTGAGGATTTGATCATACCAAATCCCAGTCCTCCTGGGTCCATCTTGTCGGTCTaGATTGGCACCCCCAGTGCA +
Preference number: 4 (lower is better)
Translates to: WAPSWLEDLIIPNPSPPGSILSV*IGTPSA
Trigger: TGCACTGGGGGTGCCAATTCAGACCGACAAGATGGA...CCCAGGAGGACTGGGATTTGGTATGATCAAATCCTCAAGCCAGCTGGGGGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR TCA 90 bp AGCCTGCAAAGCGCCTGTGTTTGTCTTGCCTCTGCTTCAGAGTGTCCAGGGCTGTCACCTCAGACCCTCTaGTCTCCCCCATCAATGCTC +
Preference number: 4 (lower is better)
Translates to: SLQSACVCLASASECPGLSPQTL*SPPSML
Trigger: GAGCATTGATGGGGGAGATCAGAGGGTCTGAGGTGA...CAGCCCTGGACACTCTGAAGCAGAGGCAAGACAAACACAGGCGCTTTGCAGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR TCA 90 bp CCATCAATGCTCCATCTTGTCGGTCTGAATTGGCACCCCCAGTGCAGGCAGCAGTCACCTCAGACCCTCTaGTCTCCCCCATCAATGCTC +
Preference number: 4 (lower is better)
Translates to: PSMLHLVGLNWHPQCRQQSPQTL*SPPSML
Trigger: GAGCATTGATGGGGGAGATCAGAGGGTCTGAGGTGA...CTGCTGCCTGCACTGGGGGTGCCAATTCAGACCGACAAGATGGAGCATTGATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000368409.8
CDS-3UTR TCA 90 bp CACAGATGGCAGGGCTTCTTCTTTGCCCTGGTCCAGCAATCGACCTGTCCCCAGGGCCCCCAGCTGGCTTaGGGATTTGATCATACCAAA +
Preference number: 4 (lower is better)
Translates to: HRWQGFFFALVQQSTCPQGPQLA*GFDHTK
Trigger: TTTGGTATGATCAAATCCTCAAGCCAGCTGGGGGCC...CTGGGGACAGGTCGATTGCTGGACCAGGGCAAAGAAGAAGCCCTGCCATCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR TCA 90 bp CAGGGCACAGATGGCAGGGCTTCTTCTTTGCCCTGGTCCAGCAATCGACCTGTCTTCATAGAAGACAAGTaGGTGATCCCCTGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: QGTDGRASSLPWSSNRPVFIEDK*VIPWGG
Trigger: CCCTCCCCAGGGGATCACTCACTTGTCTTCTATGAA...GACAGGTCGATTGCTGGACCAGGGCAAAGAAGAAGCCCTGCCATCTGTGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR GCA 90 bp AGGGCACAGATGGCAGGGCTTCTTCTTTGCCCTGGTCCAGCAATCGACCTGTCCCGCCTGTGTTTGTCTTaGCTCTGCTTCAGAGTGTCC +
Preference number: 4 (lower is better)
Translates to: RAQMAGLLLCPGPAIDLSRLCLS*LCFRVS
Trigger: GGACACTCTGAAGCAGAGGCAAGACAAACACAGGCG...GGACAGGTCGATTGCTGGACCAGGGCAAAGAAGAAGCCCTGCCATCTGTGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR GCA 90 bp TGGGCCCCCAGCTGGCTTGAGGATTTGATCATACCAAATCCCAGTCCTCCTGGGGCAGGGCTTCTTCTTTaGCCTGGTCCAGCAATCGAC +
Preference number: 4 (lower is better)
Translates to: WAPSWLEDLIIPNPSPPGAGLLL*PGPAID
Trigger: GTCGATTGCTGGACCAGGGCAAAGAAGAAGCCCTGC...CCCAGGAGGACTGGGATTTGGTATGATCAAATCCTCAAGCCAGCTGGGGGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR GCA 90 bp TGGGCCCCCAGCTGGCTTGAGGATTTGATCATACCAAATCCCAGTCCTCCTGGGTGGCTCTCCTCTCCTTaGAGCAGACAGACACCTGGA +
Preference number: 4 (lower is better)
Translates to: WAPSWLEDLIIPNPSPPGWLSSP*SRQTPG
Trigger: TCCAGGTGTCTGTCTGCTGCAAGGAGAGGAGAGCCA...CCCAGGAGGACTGGGATTTGGTATGATCAAATCCTCAAGCCAGCTGGGGGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427683.2
CDS-3UTR CCA 90 bp AGGGCACAGATGGCAGGGCTTCTTCTTTGCCCTGGTCCAGCAATCGACCTGTCCCTCCTCGAAGCAACCTaGGGTTACTGGAGTTCCAGT +
Preference number: 4 (lower is better)
Translates to: RAQMAGLLLCPGPAIDLSLLEAT*GYWSSS
Trigger: ACTGGAACTCCAGTAACCCCAGGTTGCTTCGAGGAG...GGACAGGTCGATTGCTGGACCAGGGCAAAGAAGAAGCCCTGCCATCTGTGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR CCA 90 bp GGGGGATGGGCTGAGACCCTCAGAGCAGCCTGCAAAGCGCCTGTGTTTGTCTTGCAGAACTCTCTGGAGTaGGCACCGAGATGTAGTAGT +
Preference number: 4 (lower is better)
Translates to: GGWAETLRAACKAPVFVLQNSLE*APRCSS
Trigger: ACTACTACATCTCGGTGCCCACTCCAGAGAGTTCTG...CAAGACAAACACAGGCGCTTTGCAGGCTGCTCTGAGGGTCTCAGCCCATCCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR CCA 90 bp GCCCCCAGCTGGCTTGAGGATTTGATCATACCAAATCCCAGTCCTCCTGGGGGACTGGCCAGAACTCTCTaGAGTGGGCACCGAGATGTA +
Preference number: 4 (lower is better)
Translates to: APSWLEDLIIPNPSPPGGLARTL*SGHRDV
Trigger: TACATCTCGGTGCCCACTCCAGAGAGTTCTGGCCAG...TCCCCCAGGAGGACTGGGATTTGGTATGATCAAATCCTCAAGCCAGCTGGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR CCA 90 bp GCCTGCAAAGCGCCTGTGTTTGTCTTGCCTCTGCTTCAGAGTGTCCAGGGCTGTCTGGCCAGAACTCTCTaGAGTGGGCACCGAGATGTA +
Preference number: 4 (lower is better)
Translates to: ACKAPVFVLPLLQSVQGCLARTL*SGHRDV
Trigger: TACATCTCGGTGCCCACTCCAGAGAGTTCTGGCCAG...ACAGCCCTGGACACTCTGAAGCAGAGGCAAGACAAACACAGGCGCTTTGCAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR CCA 90 bp AGCAGCCTGCAAAGCGCCTGTGTTTGTCTTGCCTCTGCTTCAGAGTGTCCAGGGCTGGCCAGAACTCTCTaGAGTGGGCACCGAGATGTA +
Preference number: 4 (lower is better)
Translates to: SSLQSACVCLASASECPGLARTL*SGHRDV
Trigger: TACATCTCGGTGCCCACTCCAGAGAGTTCTGGCCAG...CCCTGGACACTCTGAAGCAGAGGCAAGACAAACACAGGCGCTTTGCAGGCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR CCA 90 bp ACAGGGCACAGATGGCAGGGCTTCTTCTTTGCCCTGGTCCAGCAATCGACCTGTAGGACTCTGGCTCCTTaGGATGAGAGGGAAGGTTCC +
Preference number: 4 (lower is better)
Translates to: TGHRWQGFFFALVQQSTCRTLAP*DEREGS
Trigger: GGAACCTTCCCTCTCATCCCAAGGAGCCAGAGTCCT...ACAGGTCGATTGCTGGACCAGGGCAAAGAAGAAGCCCTGCCATCTGTGCCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000359751.8
CDS-3UTR CCA 90 bp ACCCTCAGAGCAGCCTGCAAAGCGCCTGTGTTTGTCTTGCCTCTGCTTCAGAGTTCCTCCAGGGGATCTTaGGAGGACTCTGGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: TLRAACKAPVFVLPLLQSSSRGS*EDSGSL
Trigger: CAAGGAGCCAGAGTCCTCCCAAGATCCCCTGGAGGA...ACTCTGAAGCAGAGGCAAGACAAACACAGGCGCTTTGCAGGCTGCTCTGAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359751.8
ENST00000368409.8
CDS-3UTR CCA 90 bp CCCAGGTCTTCAGCCTGGGCCCCCAGCTGGCTTGAGGATTTGATCATACCAAATCTTGTCGGTCTGAATTaGCACCCCCAGTGCAGGCAG +
Preference number: 4 (lower is better)
Translates to: PRSSAWAPSWLEDLIIPNLVGLN*HPQCRQ
Trigger: CTGCCTGCACTGGGGGTGCCAATTCAGACCGACAAG...ATTTGGTATGATCAAATCCTCAAGCCAGCTGGGGGCCCAGGCTGAAGACCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR CCA 90 bp CAAAGCGCCTGTGTTTGTCTTGCCTCTGCTTCAGAGTGTCCAGGGCTGTCTACTAGTCCTCCTGGGGGATaGGCTGAGACCCTCAGAGCA +
Preference number: 4 (lower is better)
Translates to: QSACVCLASASECPGLSTSPPGG*AETLRA
Trigger: TGCTCTGAGGGTCTCAGCCCATCCCCCAGGAGGACT...AGTAGACAGCCCTGGACACTCTGAAGCAGAGGCAAGACAAACACAGGCGCTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR CCA 90 bp GCCTGCAAAGCGCCTGTGTTTGTCTTGCCTCTGCTTCAGAGTGTCCAGGGCTGTGCCTGGGCCCCCAGCTaGCTTGAGGATTTGATCATA +
Preference number: 4 (lower is better)
Translates to: ACKAPVFVLPLLQSVQGCAWAPS*LEDLII
Trigger: TATGATCAAATCCTCAAGCCAGCTGGGGGCCCAGGC...ACAGCCCTGGACACTCTGAAGCAGAGGCAAGACAAACACAGGCGCTTTGCAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR CCA 90 bp AGCAGCCTGCAAAGCGCCTGTGTTTGTCTTGCCTCTGCTTCAGAGTGTCCAGGGGCCTGGGCCCCCAGCTaGCTTGAGGATTTGATCATA +
Preference number: 4 (lower is better)
Translates to: SSLQSACVCLASASECPGAWAPS*LEDLII
Trigger: TATGATCAAATCCTCAAGCCAGCTGGGGGCCCAGGC...CCCTGGACACTCTGAAGCAGAGGCAAGACAAACACAGGCGCTTTGCAGGCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR CCA 90 bp TGGGCCCCCAGCTGGCTTGAGGATTTGATCATACCAAATCCCAGTCCTCCTGGGAGGACTCTGGCTCCTTaGGATGAGAGGGAAGGTCTG +
Preference number: 4 (lower is better)
Translates to: WAPSWLEDLIIPNPSPPGRTLAP*DEREGL
Trigger: CAGACCTTCCCTCTCATCCCAAGGAGCCAGAGTCCT...CCCAGGAGGACTGGGATTTGGTATGATCAAATCCTCAAGCCAGCTGGGGGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368409.8
CDS-3UTR TCA 90 bp ACCCTCAGAGCAGCCTGCAAAGCGCCTGTGTTTGTCTTGCCTCTGCTTCAGAGTTCCATCTTGTCGGTCTaGATTGGCACCCCCAGTGCA +
Preference number: 4 (lower is better)
Translates to: TLRAACKAPVFVLPLLQSSILSV*IGTPSA
Trigger: TGCACTGGGGGTGCCAATTCAGACCGACAAGATGGA...ACTCTGAAGCAGAGGCAAGACAAACACAGGCGCTTTGCAGGCTGCTCTGAGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR TCA 90 bp TCAGAGCAGCCTGCAAAGCGCCTGTGTTTGTCTTGCCTCTGCTTCAGAGTGTCCTCACCTCAGACCCTCTaGTCTCCCCCATCAATGCTC +
Preference number: 4 (lower is better)
Translates to: SEQPAKRLCLSCLCFRVSSPQTL*SPPSML
Trigger: GAGCATTGATGGGGGAGATCAGAGGGTCTGAGGTGA...GGACACTCTGAAGCAGAGGCAAGACAAACACAGGCGCTTTGCAGGCTGCTCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR TCA 90 bp GCCTGCAAAGCGCCTGTGTTTGTCTTGCCTCTGCTTCAGAGTGTCCAGGGCTGTGGCCCCCAGCTGGCTTaGGGATTTGATCATACCAAA +
Preference number: 4 (lower is better)
Translates to: ACKAPVFVLPLLQSVQGCGPQLA*GFDHTK
Trigger: TTTGGTATGATCAAATCCTCAAGCCAGCTGGGGGCC...ACAGCCCTGGACACTCTGAAGCAGAGGCAAGACAAACACAGGCGCTTTGCAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR TCA 90 bp AGCCTGCAAAGCGCCTGTGTTTGTCTTGCCTCTGCTTCAGAGTGTCCAGGGCTGTTCATAGAAGACAAGTaGGTGATCCCCTGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: SLQSACVCLASASECPGLFIEDK*VIPWGG
Trigger: CCCTCCCCAGGGGATCACTCACTTGTCTTCTATGAA...CAGCCCTGGACACTCTGAAGCAGAGGCAAGACAAACACAGGCGCTTTGCAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR TCA 90 bp AGCAGCCTGCAAAGCGCCTGTGTTTGTCTTGCCTCTGCTTCAGAGTGTCCAGGGTTCATAGAAGACAAGTaGGTGATCCCCTGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: SSLQSACVCLASASECPGFIEDK*VIPWGG
Trigger: CCCTCCCCAGGGGATCACTCACTTGTCTTCTATGAA...CCCTGGACACTCTGAAGCAGAGGCAAGACAAACACAGGCGCTTTGCAGGCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR GCA 90 bp CAGGGCACAGATGGCAGGGCTTCTTCTTTGCCCTGGTCCAGCAATCGACCTGTCTGTTTGTCTTGCCTCTaGTTCAGAGTGTCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: QGTDGRASSLPWSSNRPVCLSCL*FRVSRA
Trigger: AGCCCTGGACACTCTGAAGCAGAGGCAAGACAAACA...GACAGGTCGATTGCTGGACCAGGGCAAAGAAGAAGCCCTGCCATCTGTGCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR GCA 90 bp TGGGCCCCCAGCTGGCTTGAGGATTTGATCATACCAAATCCCAGTCCTCCTGGGCGCCTGTGTTTGTCTTaGCTCTGCTTCAGAGTGTCC +
Preference number: 4 (lower is better)
Translates to: WAPSWLEDLIIPNPSPPGRLCLS*LCFRVS
Trigger: GGACACTCTGAAGCAGAGGCAAGACAAACACAGGCG...CCCAGGAGGACTGGGATTTGGTATGATCAAATCCTCAAGCCAGCTGGGGGCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR GCA 90 bp CAGAGCAGCCTGCAAAGCGCCTGTGTTTGTCTTGCCTCTGCTTCAGAGTGTCCAACCCTCAGAGCAGCCTaGAAAGCGCCTGTGTTTGTC +
Preference number: 4 (lower is better)
Translates to: QSSLQSACVCLASASECPTLRAA*KAPVFV
Trigger: GACAAACACAGGCGCTTTGCAGGCTGCTCTGAGGGT...TGGACACTCTGAAGCAGAGGCAAGACAAACACAGGCGCTTTGCAGGCTGCTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR GCA 90 bp CCCAGGTCTTCAGCCTGGGCCCCCAGCTGGCTTGAGGATTTGATCATACCAAATGCAGGGCTTCTTCTTTaGCCTGGTCCAGCAATCGAC +
Preference number: 4 (lower is better)
Translates to: PRSSAWAPSWLEDLIIPNAGLLL*PGPAID
Trigger: GTCGATTGCTGGACCAGGGCAAAGAAGAAGCCCTGC...ATTTGGTATGATCAAATCCTCAAGCCAGCTGGGGGCCCAGGCTGAAGACCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR CCA 90 bp TGGGCTGAGACCCTCAGAGCAGCCTGCAAAGCGCCTGTGTTTGTCTTGCCTCTGGCAACCTGGGGTTACTaGAGTTCCAGTAGACTACGT +
Preference number: 4 (lower is better)
Translates to: WAETLRAACKAPVFVLPLATWGY*SSSRLR
Trigger: ACGTAGTCTACTGGAACTCCAGTAACCCCAGGTTGC...CAGAGGCAAGACAAACACAGGCGCTTTGCAGGCTGCTCTGAGGGTCTCAGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR CCA 90 bp GATGGCAGGGCTTCTTCTTTGCCCTGGTCCAGCAATCGACCTGTCCCCAGGTCTGCAACCTGGGGTTACTaGAGTTCCAGTAGACTACGT +
Preference number: 4 (lower is better)
Translates to: DGRASSLPWSSNRPVPRSATWGY*SSSRLR
Trigger: ACGTAGTCTACTGGAACTCCAGTAACCCCAGGTTGC...AGACCTGGGGACAGGTCGATTGCTGGACCAGGGCAAAGAAGAAGCCCTGCCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR CCA 90 bp GTCCGTCTTCATAGAAGACAAGTGAGTGATCCCCTGGGGAGGGCAAGGTGCTGCCTCCTCGAAGCAACCTaGGGTTACTGGAGTTCCAGT +
Preference number: 4 (lower is better)
Translates to: VRLHRRQVSDPLGRARCCLLEAT*GYWSSS
Trigger: ACTGGAACTCCAGTAACCCCAGGTTGCTTCGAGGAG...GCAGCACCTTGCCCTCCCCAGGGGATCACTCACTTGTCTTCTATGAAGACGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR CCA 90 bp ACCCTCAGAGCAGCCTGCAAAGCGCCTGTGTTTGTCTTGCCTCTGCTTCAGAGTGCCTGGGCCCCCAGCTaGCTTGAGGATTTGATCATA +
Preference number: 4 (lower is better)
Translates to: TLRAACKAPVFVLPLLQSAWAPS*LEDLII
Trigger: TATGATCAAATCCTCAAGCCAGCTGGGGGCCCAGGC...ACTCTGAAGCAGAGGCAAGACAAACACAGGCGCTTTGCAGGCTGCTCTGAGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR CCA 90 bp ACAGGGCACAGATGGCAGGGCTTCTTCTTTGCCCTGGTCCAGCAATCGACCTGTGCTTCTTCTTTGCCCTaGTCCAGCAATCGACCTGTC +
Preference number: 4 (lower is better)
Translates to: TGHRWQGFFFALVQQSTCASSLP*SSNRPV
Trigger: GACAGGTCGATTGCTGGACCAGGGCAAAGAAGAAGC...ACAGGTCGATTGCTGGACCAGGGCAAAGAAGAAGCCCTGCCATCTGTGCCCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR CCA 90 bp TGGGCCCCCAGCTGGCTTGAGGATTTGATCATACCAAATCCCAGTCCTCCTGGGGCTTCTTCTTTGCCCTaGTCCAGCAATCGACCTGTC +
Preference number: 4 (lower is better)
Translates to: WAPSWLEDLIIPNPSPPGASSLP*SSNRPV
Trigger: GACAGGTCGATTGCTGGACCAGGGCAAAGAAGAAGC...CCCAGGAGGACTGGGATTTGGTATGATCAAATCCTCAAGCCAGCTGGGGGCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR CCA 90 bp CAAAGCGCCTGTGTTTGTCTTGCCTCTGCTTCAGAGTGTCCAGGGCTGTCTACTGGGCTCCCAACAGGATaGGCTGACTCAGACTTCCTC +
Preference number: 4 (lower is better)
Translates to: QSACVCLASASECPGLSTGLPTG*ADSDFL
Trigger: GAGGAAGTCTGAGTCAGCCCATCCTGTTGGGAGCCC...AGTAGACAGCCCTGGACACTCTGAAGCAGAGGCAAGACAAACACAGGCGCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368409.8
CDS-3UTR CCA 90 bp GGATGGGCTGAGACCCTCAGAGCAGCCTGCAAAGCGCCTGTGTTTGTCTTGCCTGAGGGAAGGTCTGCTTaGCTCACAGAATTCGCAGAA +
Preference number: 4 (lower is better)
Translates to: GWAETLRAACKAPVFVLPEGRSA*LTEFAE
Trigger: TTCTGCGAATTCTGTGAGCCAAGCAGACCTTCCCTC...AGGCAAGACAAACACAGGCGCTTTGCAGGCTGCTCTGAGGGTCTCAGCCCATCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368409.8
CDS-3UTR TCA 90 bp GGGGGATGGGCTGAGACCCTCAGAGCAGCCTGCAAAGCGCCTGTGTTTGTCTTGGCGCTGAATCTTCTCTaGGAATTGAACATGGCCAAA +
Preference number: 4 (lower is better)
Translates to: GGWAETLRAACKAPVFVLALNLL*ELNMAK
Trigger: TTTGGCCATGTTCAATTCTCAGAGAAGATTCAGCGC...CAAGACAAACACAGGCGCTTTGCAGGCTGCTCTGAGGGTCTCAGCCCATCCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR TCA 90 bp GCAGCCTGCAAAGCGCCTGTGTTTGTCTTGCCTCTGCTTCAGAGTGTCCAGGGCGCTGGCTTGAGGATTTaGTCATACCAAATCCCAGTC +
Preference number: 4 (lower is better)
Translates to: AACKAPVFVLPLLQSVQGAGLRI*SYQIPV
Trigger: GACTGGGATTTGGTATGATCAAATCCTCAAGCCAGC...GCCCTGGACACTCTGAAGCAGAGGCAAGACAAACACAGGCGCTTTGCAGGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR TCA 90 bp ACAGATGGCAGGGCTTCTTCTTTGCCCTGGTCCAGCAATCGACCTGTCCCCAGGGCTGGCTTGAGGATTTaGTCATACCAAATCCCAGTC +
Preference number: 4 (lower is better)
Translates to: TDGRASSLPWSSNRPVPRAGLRI*SYQIPV
Trigger: GACTGGGATTTGGTATGATCAAATCCTCAAGCCAGC...CCTGGGGACAGGTCGATTGCTGGACCAGGGCAAAGAAGAAGCCCTGCCATCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR GCA 90 bp GCCCCCAGCTGGCTTGAGGATTTGATCATACCAAATCCCAGTCCTCCTGGGGGATGTTTGTCTTGCCTCTaGTTCAGAGTGTCCAGGGCT +
Preference number: 4 (lower is better)
Translates to: APSWLEDLIIPNPSPPGGCLSCL*FRVSRA
Trigger: AGCCCTGGACACTCTGAAGCAGAGGCAAGACAAACA...TCCCCCAGGAGGACTGGGATTTGGTATGATCAAATCCTCAAGCCAGCTGGGGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR CCA 90 bp ACAGGGCACAGATGGCAGGGCTTCTTCTTTGCCCTGGTCCAGCAATCGACCTGTGCAACCTGGGGTTACTaGAGTTCCAGTAGACTACGT +
Preference number: 4 (lower is better)
Translates to: TGHRWQGFFFALVQQSTCATWGY*SSSRLR
Trigger: ACGTAGTCTACTGGAACTCCAGTAACCCCAGGTTGC...ACAGGTCGATTGCTGGACCAGGGCAAAGAAGAAGCCCTGCCATCTGTGCCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR CCA 90 bp CCCAGGTCTTCAGCCTGGGCCCCCAGCTGGCTTGAGGATTTGATCATACCAAATGCAGGACTCATAGCCTaGCCAGTCCACCATGTACAA +
Preference number: 4 (lower is better)
Translates to: PRSSAWAPSWLEDLIIPNAGLIA*PVHHVQ
Trigger: TTGTACATGGTGGACTGGCCAGGCTATGAGTCCTGC...ATTTGGTATGATCAAATCCTCAAGCCAGCTGGGGGCCCAGGCTGAAGACCTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR CCA 90 bp ACCCTCAGAGCAGCCTGCAAAGCGCCTGTGTTTGTCTTGCCTCTGCTTCAGAGTGCAGGACTCATAGCCTaGCCAGTCCACCATGTACAA +
Preference number: 4 (lower is better)
Translates to: TLRAACKAPVFVLPLLQSAGLIA*PVHHVQ
Trigger: TTGTACATGGTGGACTGGCCAGGCTATGAGTCCTGC...ACTCTGAAGCAGAGGCAAGACAAACACAGGCGCTTTGCAGGCTGCTCTGAGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR CCA 90 bp CTGAGACCCTCAGAGCAGCCTGCAAAGCGCCTGTGTTTGTCTTGCCTCTGCTTCCAGAACTCTCTGGAGTaGGCACCGAGATGTAGTAGT +
Preference number: 4 (lower is better)
Translates to: LRPSEQPAKRLCLSCLCFQNSLE*APRCSS
Trigger: ACTACTACATCTCGGTGCCCACTCCAGAGAGTTCTG...GAAGCAGAGGCAAGACAAACACAGGCGCTTTGCAGGCTGCTCTGAGGGTCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR CCA 90 bp GAGCAGCCTGCAAAGCGCCTGTGTTTGTCTTGCCTCTGCTTCAGAGTGTCCAGGCAGAACTCTCTGGAGTaGGCACCGAGATGTAGTAGT +
Preference number: 4 (lower is better)
Translates to: EQPAKRLCLSCLCFRVSRQNSLE*APRCSS
Trigger: ACTACTACATCTCGGTGCCCACTCCAGAGAGTTCTG...CCTGGACACTCTGAAGCAGAGGCAAGACAAACACAGGCGCTTTGCAGGCTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR CCA 90 bp CAAAGCGCCTGTGTTTGTCTTGCCTCTGCTTCAGAGTGTCCAGGGCTGTCTACTATCTTGGGAGGACTCTaGCTCCTTGGGATGAGAGGG +
Preference number: 4 (lower is better)
Translates to: QSACVCLASASECPGLSTILGGL*LLGMRG
Trigger: CCCTCTCATCCCAAGGAGCCAGAGTCCTCCCAAGAT...AGTAGACAGCCCTGGACACTCTGAAGCAGAGGCAAGACAAACACAGGCGCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000359751.8
ENST00000368409.8
CDS-3UTR TCA 90 bp AGGGCACAGATGGCAGGGCTTCTTCTTTGCCCTGGTCCAGCAATCGACCTGTCCGCGCTGAATCTTCTCTaGGAATTGAACATGGCCAAA +
Preference number: 4 (lower is better)
Translates to: RAQMAGLLLCPGPAIDLSALNLL*ELNMAK
Trigger: TTTGGCCATGTTCAATTCTCAGAGAAGATTCAGCGC...GGACAGGTCGATTGCTGGACCAGGGCAAAGAAGAAGCCCTGCCATCTGTGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR GCA 90 bp AGCAGCCTGCAAAGCGCCTGTGTTTGTCTTGCCTCTGCTTCAGAGTGTCCAGGGTCCAGGGCTGTCTACTaGTCTTCTTTAGCCTGTGAT +
Preference number: 4 (lower is better)
Translates to: SSLQSACVCLASASECPGSRAVY*SSLACD
Trigger: ATCACAGGCTAAAGAAGAGCAGTAGACAGCCCTGGA...CCCTGGACACTCTGAAGCAGAGGCAAGACAAACACAGGCGCTTTGCAGGCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR GCA 90 bp GCAAAGCGCCTGTGTTTGTCTTGCCTCTGCTTCAGAGTGTCCAGGGCTGTCTACATGAGAGGGAAGGTCTaGTTGGCTCACAGAATTCGC +
Preference number: 4 (lower is better)
Translates to: AKRLCLSCLCFRVSRAVYMRGKV*LAHRIR
Trigger: GCGAATTCTGTGAGCCAAGCAGACCTTCCCTCTCAT...GTAGACAGCCCTGGACACTCTGAAGCAGAGGCAAGACAAACACAGGCGCTTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368409.8
CDS-3UTR GCA 90 bp AGAGTCCGTCTTCATAGAAGACAAGTGAGTGATCCCCTGGGGAGGGCAAGGTGCTCCAGGGCTGTCTACTaGTCTTCTTTAGCCTGTGAT +
Preference number: 4 (lower is better)
Translates to: RVRLHRRQVSDPLGRARCSRAVY*SSLACD
Trigger: ATCACAGGCTAAAGAAGAGCAGTAGACAGCCCTGGA...GCACCTTGCCCTCCCCAGGGGATCACTCACTTGTCTTCTATGAAGACGGACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR TCA 90 bp AGAGTCCGTCTTCATAGAAGACAAGTGAGTGATCCCCTGGGGAGGGCAAGGTGCGCGCTGAATCTTCTCTaGGAATTGAACATGGCCAAA +
Preference number: 4 (lower is better)
Translates to: RVRLHRRQVSDPLGRARCALNLL*ELNMAK
Trigger: TTTGGCCATGTTCAATTCTCAGAGAAGATTCAGCGC...GCACCTTGCCCTCCCCAGGGGATCACTCACTTGTCTTCTATGAAGACGGACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR CCA 90 bp AAAAATACAAACTGGCATGAAATTCAACCTCATGAAGAGTCCGTCTTCATAGAACGGTTTGGTCTGGCCTaGCAGGTCCCGGCCCGCTTC +
Preference number: 4 (lower is better)
Translates to: KNTNWHEIQPHEESVFIERFGLA*QVPARF
Trigger: GAAGCGGGCCGGGACCTGCCAGGCCAGACCAAACCG...TTCTATGAAGACGGACTCTTCATGAGGTTGAATTTCATGCCAGTTTGTATTTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR CCA 90 bp CACAGATGGCAGGGCTTCTTCTTTGCCCTGGTCCAGCAATCGACCTGTCCCCAGCAACAAAAAGATGAGTaGTTTATTGAAGGTTTGGTC +
Preference number: 4 (lower is better)
Translates to: HRWQGFFFALVQQSTCPQQQKDE*FIEGLV
Trigger: GACCAAACCTTCAATAAACCACTCATCTTTTTGTTG...CTGGGGACAGGTCGATTGCTGGACCAGGGCAAAGAAGAAGCCCTGCCATCTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000368409.8
CDS-3UTR CCA 90 bp ACAAACTGGCATGAAATTCAACCTCATGAAGAGTCCGTCTTCATAGAAGACAAGCAGCAGACAGACACCTaGAGCCTCAAGCACTGGCCA +
Preference number: 4 (lower is better)
Translates to: TNWHEIQPHEESVFIEDKQQTDT*SLKHWP
Trigger: TGGCCAGTGCTTGAGGCTCCAGGTGTCTGTCTGCTG...CTTGTCTTCTATGAAGACGGACTCTTCATGAGGTTGAATTTCATGCCAGTTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR TCA 90 bp ACAAACTGGCATGAAATTCAACCTCATGAAGAGTCCGTCTTCATAGAAGACAAGTCCATCTTGTCGGTCTaGATTGGCACCCCCAGTGCA +
Preference number: 4 (lower is better)
Translates to: TNWHEIQPHEESVFIEDKSILSV*IGTPSA
Trigger: TGCACTGGGGGTGCCAATTCAGACCGACAAGATGGA...CTTGTCTTCTATGAAGACGGACTCTTCATGAGGTTGAATTTCATGCCAGTTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR GCA 90 bp AATACAAACTGGCATGAAATTCAACCTCATGAAGAGTCCGTCTTCATAGAAGACCGCCTGTGTTTGTCTTaGCTCTGCTTCAGAGTGTCC +
Preference number: 4 (lower is better)
Translates to: NTNWHEIQPHEESVFIEDRLCLS*LCFRVS
Trigger: GGACACTCTGAAGCAGAGGCAAGACAAACACAGGCG...GTCTTCTATGAAGACGGACTCTTCATGAGGTTGAATTTCATGCCAGTTTGTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR CCA 90 bp AAAAATACAAACTGGCATGAAATTCAACCTCATGAAGAGTCCGTCTTCATAGAACCCACAGGGCACAGATaGCAGGGCTTCTTCTTTGCC +
Preference number: 4 (lower is better)
Translates to: KNTNWHEIQPHEESVFIEPTGHR*QGFFFA
Trigger: GGCAAAGAAGAAGCCCTGCCATCTGTGCCCTGTGGG...TTCTATGAAGACGGACTCTTCATGAGGTTGAATTTCATGCCAGTTTGTATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR GCA 90 bp AATACAAACTGGCATGAAATTCAACCTCATGAAGAGTCCGTCTTCATAGAAGACTCCAGGGCTGTCTACTaGTCTTCTTTAGCCTGTGAT +
Preference number: 4 (lower is better)
Translates to: NTNWHEIQPHEESVFIEDSRAVY*SSLACD
Trigger: ATCACAGGCTAAAGAAGAGCAGTAGACAGCCCTGGA...GTCTTCTATGAAGACGGACTCTTCATGAGGTTGAATTTCATGCCAGTTTGTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR TCA 90 bp AAAAATACAAACTGGCATGAAATTCAACCTCATGAAGAGTCCGTCTTCATAGAAGCTGGCTTGAGGATTTaGTCATACCAAATCCCAGTC +
Preference number: 4 (lower is better)
Translates to: KNTNWHEIQPHEESVFIEAGLRI*SYQIPV
Trigger: GACTGGGATTTGGTATGATCAAATCCTCAAGCCAGC...TTCTATGAAGACGGACTCTTCATGAGGTTGAATTTCATGCCAGTTTGTATTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS GCA 90 bp AAAGGGCAGGGAGCACACCCAGCGCTTGTAGGCCCGGGGGCCCTCTaGCTGGCAGGACTCATAGCCTGGCCAGTCCACCATGTACAAAGC +
Preference number: 5 (lower is better)
Translates to: KGQGAHPALVGPGAL*LAGLIAWPVHHVQS
Trigger: GCTTTGTACATGGTGGACTGGCCAGGCTATGAGTCCTGCCAGGCAGAGGGCCCCCGGGCCTACAAGCGCTGGGTGTGCTCCCTGCCCTTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR CAA 90 bp GGATGGGCTGAGACCCTCAGAGCAGCCTGCAAAGCGCCTGTGTTTGTCTTGCCTCCCCCGAGGTCCGGTTaGGTCTGGCCTGGCAGGTCC +
Preference number: 5 (lower is better)
Translates to: GWAETLRAACKAPVFVLPPPRSG*VWPGRS
Trigger: GGACCTGCCAGGCCAGACCAAACCGGACCTCGGGGG...AGGCAAGACAAACACAGGCGCTTTGCAGGCTGCTCTGAGGGTCTCAGCCCATCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS TCA 90 bp GCCCTGGGCCTTCGTAGTGGGGGCAGACAATGTCTAGGTAATCGTTaGGGCCCAGCTCCACCACGGCGTCTCCTCGAAGCAACCTGGGGT +
Preference number: 5 (lower is better)
Translates to: ALGLRSGGRQCLGNR*GPAPPRRLLEATWG
Trigger: ACCCCAGGTTGCTTCGAGGAGACGCCGTGGTGGAGCTGGGCCTCAACGATTACCTAGACATTGTCTGCCCCCACTACGAAGGCCCAGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR CAA 90 bp AGAGTCCGTCTTCATAGAAGACAAGTGAGTGATCCCCTGGGGAGGGCAAGGTGCCCCCCGAGGTCCGGTTaGGTCTGGCCTGGCAGGTCC +
Preference number: 5 (lower is better)
Translates to: RVRLHRRQVSDPLGRARCPPRSG*VWPGRS
Trigger: GGACCTGCCAGGCCAGACCAAACCGGACCTCGGGGG...GCACCTTGCCCTCCCCAGGGGATCACTCACTTGTCTTCTATGAAGACGGACTCT
62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS CCA 90 bp AGGCAGCAGGGATCCCTCCTCCTCCAGGGGATCTTGGGAGGACTCTaGCTCCTTGGGATGAGAGGGAAGGTTCCTCTCCTTGCAGCAGAC +
Preference number: 5 (lower is better)
Translates to: RQQGSLLLQGILGGL*LLGMRGKVPLLAAD
Trigger: GTCTGCTGCAAGGAGAGGAACCTTCCCTCTCATCCCAAGGAGCCAGAGTCCTCCCAAGATCCCCTGGAGGAGGAGGGATCCCTGCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359751.8
CDS CCA 90 bp GGATGGGCTGACTCAGACTTCCTCTCCTTGCAGCAGACAGACACCTaGAGCCTCAAGCACTGGCCAGAACTCTCTGGAGTGGGCACCGAG +
Preference number: 5 (lower is better)
Translates to: GWADSDFLSLQQTDT*SLKHWPELSGVGTE
Trigger: CTCGGTGCCCACTCCAGAGAGTTCTGGCCAGTGCTTGAGGCTCCAGGTGTCTGTCTGCTGCAAGGAGAGGAAGTCTGAGTCAGCCCATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368409.8
CDS-3UTR CAA 90 bp CAGGGCACAGATGGCAGGGCTTCTTCTTTGCCCTGGTCCAGCAATCGACCTGTCCTCCTCCAGGGGATCTaGGGAGGACTCTGGCTCCTT +
Preference number: 5 (lower is better)
Translates to: QGTDGRASSLPWSSNRPVLLQGI*GGLWLL
Trigger: AAGGAGCCAGAGTCCTCCCAAGATCCCCTGGAGGAG...GACAGGTCGATTGCTGGACCAGGGCAAAGAAGAAGCCCTGCCATCTGTGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359751.8
ENST00000368409.8
CDS CCA 90 bp AGGCAGCAGGGATCCCTCCTCCTCCAGGGGATCTTGGGAGGACTCTaGCTCCTTGGGATGAGAGGGAAGGTCTGCTTGGCTCACAGAATT +
Preference number: 5 (lower is better)
Translates to: RQQGSLLLQGILGGL*LLGMRGKVCLAHRI
Trigger: AATTCTGTGAGCCAAGCAGACCTTCCCTCTCATCCCAAGGAGCCAGAGTCCTCCCAAGATCCCCTGGAGGAGGAGGGATCCCTGCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368409.8
CDS-3UTR CAA 90 bp GATGGCAGGGCTTCTTCTTTGCCCTGGTCCAGCAATCGACCTGTCCCCAGGTCTGGAAGGTTCCTCTCCTaGCAGCAGACAGACACCTGG +
Preference number: 5 (lower is better)
Translates to: DGRASSLPWSSNRPVPRSGRFLS*QQTDTW
Trigger: CCAGGTGTCTGTCTGCTGCAAGGAGAGGAACCTTCC...AGACCTGGGGACAGGTCGATTGCTGGACCAGGGCAAAGAAGAAGCCCTGCCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359751.8
CDS-3UTR CAA 90 bp CAGGGCACAGATGGCAGGGCTTCTTCTTTGCCCTGGTCCAGCAATCGACCTGTCGGCAGGGCTTCTTCTTaGCCCTGGTCCAGCAATCGA +
Preference number: 5 (lower is better)
Translates to: QGTDGRASSLPWSSNRPVGRASS*PWSSNR
Trigger: TCGATTGCTGGACCAGGGCAAAGAAGAAGCCCTGCC...GACAGGTCGATTGCTGGACCAGGGCAAAGAAGAAGCCCTGCCATCTGTGCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR CAA 90 bp TCCCTCCTCCTCCAGGGGATCTTGGGAGGACTCTGGCTCCTTGGGATGAGAGGGAGAGGGAAGGTCTGCTaGGCTCACAGAATTCGCAGA +
Preference number: 5 (lower is better)
Translates to: SLLLQGILGGLWLLGMRGRGKVC*AHRIRR
Trigger: TCTGCGAATTCTGTGAGCCAAGCAGACCTTCCCTCT...CCCTCTCATCCCAAGGAGCCAGAGTCCTCCCAAGATCCCCTGGAGGAGGAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368409.8
CDS-3UTR CAA 90 bp GCCTGCAAAGCGCCTGTGTTTGTCTTGCCTCTGCTTCAGAGTGTCCAGGGCTGTTCTTGTCGGTCTGAATaGGCACCCCCAGTGCAGGCA +
Preference number: 5 (lower is better)
Translates to: ACKAPVFVLPLLQSVQGCSCRSE*APPVQA
Trigger: TGCCTGCACTGGGGGTGCCAATTCAGACCGACAAGA...ACAGCCCTGGACACTCTGAAGCAGAGGCAAGACAAACACAGGCGCTTTGCAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR CAA 90 bp CTGAGACCCTCAGAGCAGCCTGCAAAGCGCCTGTGTTTGTCTTGCCTCTGCTTCTCTTGTCGGTCTGAATaGGCACCCCCAGTGCAGGCA +
Preference number: 5 (lower is better)
Translates to: LRPSEQPAKRLCLSCLCFSCRSE*APPVQA
Trigger: TGCCTGCACTGGGGGTGCCAATTCAGACCGACAAGA...GAAGCAGAGGCAAGACAAACACAGGCGCTTTGCAGGCTGCTCTGAGGGTCTCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR CAA 90 bp TGGGCTGAGACCCTCAGAGCAGCCTGCAAAGCGCCTGTGTTTGTCTTGCCTCTGGCGCCTGTGTTTGTCTaGCCTCTGCTTCAGAGTGTC +
Preference number: 5 (lower is better)
Translates to: WAETLRAACKAPVFVLPLAPVFV*PLLQSV
Trigger: GACACTCTGAAGCAGAGGCAAGACAAACACAGGCGC...CAGAGGCAAGACAAACACAGGCGCTTTGCAGGCTGCTCTGAGGGTCTCAGCCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR CAA 90 bp CACAGATGGCAGGGCTTCTTCTTTGCCCTGGTCCAGCAATCGACCTGTCCCCAGGCGCCTGTGTTTGTCTaGCCTCTGCTTCAGAGTGTC +
Preference number: 5 (lower is better)
Translates to: HRWQGFFFALVQQSTCPQAPVFV*PLLQSV
Trigger: GACACTCTGAAGCAGAGGCAAGACAAACACAGGCGC...CTGGGGACAGGTCGATTGCTGGACCAGGGCAAAGAAGAAGCCCTGCCATCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR CAA 90 bp GTCCGTCTTCATAGAAGACAAGTGAGTGATCCCCTGGGGAGGGCAAGGTGCTGCGGCAGGGCTTCTTCTTaGCCCTGGTCCAGCAATCGA +
Preference number: 5 (lower is better)
Translates to: VRLHRRQVSDPLGRARCCGRASS*PWSSNR
Trigger: TCGATTGCTGGACCAGGGCAAAGAAGAAGCCCTGCC...GCAGCACCTTGCCCTCCCCAGGGGATCACTCACTTGTCTTCTATGAAGACGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR CAA 90 bp CAGAGCAGCCTGCAAAGCGCCTGTGTTTGTCTTGCCTCTGCTTCAGAGTGTCCATCTTGTCGGTCTGAATaGGCACCCCCAGTGCAGGCA +
Preference number: 5 (lower is better)
Translates to: QSSLQSACVCLASASECPSCRSE*APPVQA
Trigger: TGCCTGCACTGGGGGTGCCAATTCAGACCGACAAGA...TGGACACTCTGAAGCAGAGGCAAGACAAACACAGGCGCTTTGCAGGCTGCTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR CAA 90 bp GTCCGTCTTCATAGAAGACAAGTGAGTGATCCCCTGGGGAGGGCAAGGTGCTGCGCGCCTGTGTTTGTCTaGCCTCTGCTTCAGAGTGTC +
Preference number: 5 (lower is better)
Translates to: VRLHRRQVSDPLGRARCCAPVFV*PLLQSV
Trigger: GACACTCTGAAGCAGAGGCAAGACAAACACAGGCGC...GCAGCACCTTGCCCTCCCCAGGGGATCACTCACTTGTCTTCTATGAAGACGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR CAA 90 bp CCCAGGTCTTCAGCCTGGGCCCCCAGCTGGCTTGAGGATTTGATCATACCAAATGGCAGGGCTTCTTCTTaGCCCTGGTCCAGCAATCGA +
Preference number: 5 (lower is better)
Translates to: PRSSAWAPSWLEDLIIPNGRASS*PWSSNR
Trigger: TCGATTGCTGGACCAGGGCAAAGAAGAAGCCCTGCC...ATTTGGTATGATCAAATCCTCAAGCCAGCTGGGGGCCCAGGCTGAAGACCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS GCA 90 bp GGGATCTTGGGAGGACTCTGGCTCCTTGGGATGAGAGGGAAGGTCTaGTTGGCTCACAGAATTCGCAGAAGACGAAGAATCAGAAGCAGC +
Preference number: 5 (lower is better)
Translates to: GILGGLWLLGMRGKV*LAHRIRRRRRIRSS
Trigger: GCTGCTTCTGATTCTTCGTCTTCTGCGAATTCTGTGAGCCAAGCAGACCTTCCCTCTCATCCCAAGGAGCCAGAGTCCTCCCAAGATCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368409.8
CDS-3UTR CAA 90 bp AATACAAACTGGCATGAAATTCAACCTCATGAAGAGTCCGTCTTCATAGAAGACCCCCCGAGGTCCGGTTaGGTCTGGCCTGGCAGGTCC +
Preference number: 5 (lower is better)
Translates to: NTNWHEIQPHEESVFIEDPPRSG*VWPGRS
Trigger: GGACCTGCCAGGCCAGACCAAACCGGACCTCGGGGG...GTCTTCTATGAAGACGGACTCTTCATGAGGTTGAATTTCATGCCAGTTTGTATT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR CAA 90 bp ACCCTCAGAGCAGCCTGCAAAGCGCCTGTGTTTGTCTTGCCTCTGCTTCAGAGTAGCTGGCTTGAGGATTaGATCATACCAAATCCCAGT +
Preference number: 5 (lower is better)
Translates to: TLRAACKAPVFVLPLLQSSWLED*IIPNPS
Trigger: ACTGGGATTTGGTATGATCAAATCCTCAAGCCAGCT...ACTCTGAAGCAGAGGCAAGACAAACACAGGCGCTTTGCAGGCTGCTCTGAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR CAA 90 bp CAAAGCGCCTGTGTTTGTCTTGCCTCTGCTTCAGAGTGTCCAGGGCTGTCTACTAGCTGGCTTGAGGATTaGATCATACCAAATCCCAGT +
Preference number: 5 (lower is better)
Translates to: QSACVCLASASECPGLSTSWLED*IIPNPS
Trigger: ACTGGGATTTGGTATGATCAAATCCTCAAGCCAGCT...AGTAGACAGCCCTGGACACTCTGAAGCAGAGGCAAGACAAACACAGGCGCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR CAA 90 bp AGATGGCAGGGCTTCTTCTTTGCCCTGGTCCAGCAATCGACCTGTCCCCAGGTCAAGATGAGTGGTTTATaGAAGGTTTGGTCTAGATAC +
Preference number: 5 (lower is better)
Translates to: RWQGFFFALVQQSTCPQVKMSGL*KVWSRY
Trigger: GTATCTAGACCAAACCTTCAATAAACCACTCATCTT...GACCTGGGGACAGGTCGATTGCTGGACCAGGGCAAAGAAGAAGCCCTGCCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR CAA 90 bp GCCTGCAAAGCGCCTGTGTTTGTCTTGCCTCTGCTTCAGAGTGTCCAGGGCTGTAAGATGAGTGGTTTATaGAAGGTTTGGTCTAGATAC +
Preference number: 5 (lower is better)
Translates to: ACKAPVFVLPLLQSVQGCKMSGL*KVWSRY
Trigger: GTATCTAGACCAAACCTTCAATAAACCACTCATCTT...ACAGCCCTGGACACTCTGAAGCAGAGGCAAGACAAACACAGGCGCTTTGCAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR CAA 90 bp GAGCAGCCTGCAAAGCGCCTGTGTTTGTCTTGCCTCTGCTTCAGAGTGTCCAGGAAGATGAGTGGTTTATaGAAGGTTTGGTCTAGATAC +
Preference number: 5 (lower is better)
Translates to: EQPAKRLCLSCLCFRVSRKMSGL*KVWSRY
Trigger: GTATCTAGACCAAACCTTCAATAAACCACTCATCTT...CCTGGACACTCTGAAGCAGAGGCAAGACAAACACAGGCGCTTTGCAGGCTGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS-3UTR CAA 90 bp AATACAAACTGGCATGAAATTCAACCTCATGAAGAGTCCGTCTTCATAGAAGACAGCTGGCTTGAGGATTaGATCATACCAAATCCCAGT +
Preference number: 5 (lower is better)
Translates to: NTNWHEIQPHEESVFIEDSWLED*IIPNPS
Trigger: ACTGGGATTTGGTATGATCAAATCCTCAAGCCAGCT...GTCTTCTATGAAGACGGACTCTTCATGAGGTTGAATTTCATGCCAGTTTGTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS CCA 72 bp GCAGCAGCCGCATCGCCCCCGAGGTCCGGTTTGGTCTaGCCTGGCAGGTCCCGGCCCGCTTCACAGTCGAGG +
Preference number: 6 (lower is better)
Translates to: AAAASPPRSGLV*PGRSRPASQSR
Trigger: CCTCGACTGTGAAGCGGGCCGGGACCTGCCAGGCCAGACCAAACCGGACCTCGGGGGCGATGCGGCTGCTGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS CCA 72 bp AGCCGCATCGCCCCCGAGGTCCGGTTTGGTCTGGCCTaGCAGGTCCCGGCCCGCTTCACAGTCGAGGAGAGA +
Preference number: 6 (lower is better)
Translates to: SRIAPEVRFGLA*QVPARFTVEER
Trigger: TCTCTCCTCGACTGTGAAGCGGGCCGGGACCTGCCAGGCCAGACCAAACCGGACCTCGGGGGCGATGCGGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000359751.8
ENST00000368409.8
CDS GCA 72 bp GGAGCACACCCAGCGCTTGTAGGCCCGGGGGCCCTCTaGCTGGCAGGACTCATAGCCTGGCCAGTCCACCAT +
Preference number: 6 (lower is better)
Translates to: GAHPALVGPGAL*LAGLIAWPVHH
Trigger: ATGGTGGACTGGCCAGGCTATGAGTCCTGCCAGGCAGAGGGCCCCCGGGCCTACAAGCGCTGGGTGTGCTCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS CCA 72 bp GGTTACTGGAGTTCCAGTAGACTACGTGGCGGAGGCTaGAGCCCCCGCGCAGAGGGGAGCCGAGGAACGCGG +
Preference number: 6 (lower is better)
Translates to: GYWSSSRLRGGG*SPRAEGSRGTR
Trigger: CCGCGTTCCTCGGCTCCCCTCTGCGCGGGGGCTCCAGCCTCCGCCACGTAGTCTACTGGAACTCCAGTAACC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS CCA 72 bp CCTCCTCCAGGGGATCTTGGGAGGACTCTGGCTCCTTaGGATGAGAGGGAAGGTTCCTCTCCTTGCAGCAGA +
Preference number: 6 (lower is better)
Translates to: PPPGDLGRTLAP*DEREGSSPCSR
Trigger: TCTGCTGCAAGGAGAGGAACCTTCCCTCTCATCCCAAGGAGCCAGAGTCCTCCCAAGATCCCCTGGAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359751.8
CDS CCA 72 bp GGATCCCTCCTCCTCCAGGGGATCTTGGGAGGACTCTaGCTCCTTGGGATGAGAGGGAAGGTTCCTCTCCTT +
Preference number: 6 (lower is better)
Translates to: GSLLLQGILGGL*LLGMRGKVPLL
Trigger: AAGGAGAGGAACCTTCCCTCTCATCCCAAGGAGCCAGAGTCCTCCCAAGATCCCCTGGAGGAGGAGGGATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359751.8
CDS TCA 72 bp CTTCGTAGTGGGGGCAGACAATGTCTAGGTAATCGTTaGGGCCCAGCTCCACCACGGCGTCTCCTCGAAGCA +
Preference number: 6 (lower is better)
Translates to: LRSGGRQCLGNR*GPAPPRRLLEA
Trigger: TGCTTCGAGGAGACGCCGTGGTGGAGCTGGGCCTCAACGATTACCTAGACATTGTCTGCCCCCACTACGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS CCA 72 bp AGACACCTGGAGCCTCAAGCACTGGCCAGAACTCTCTaGAGTGGGCACCGAGATGTAGTAGTAAGTCTCTCC +
Preference number: 6 (lower is better)
Translates to: RHLEPQALARTL*SGHRDVVVSLS
Trigger: GGAGAGACTTACTACTACATCTCGGTGCCCACTCCAGAGAGTTCTGGCCAGTGCTTGAGGCTCCAGGTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359751.8
ENST00000368409.8
ENST00000427683.2
CDS GCA 72 bp GGAGGACTCTGGCTCCTTGGGATGAGAGGGAAGGTCTaGTTGGCTCACAGAATTCGCAGAAGACGAAGAATC +
Preference number: 6 (lower is better)
Translates to: GGLWLLGMRGKV*LAHRIRRRRRI
Trigger: GATTCTTCGTCTTCTGCGAATTCTGTGAGCCAAGCAGACCTTCCCTCTCATCCCAAGGAGCCAGAGTCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368409.8
CDS CAA 72 bp GGACTCTGGCTCCTTGGGATGAGAGGGAAGGTCTGCTaGGCTCACAGAATTCGCAGAAGACGAAGAATCAGA +
Preference number: 6 (lower is better)
Translates to: GLWLLGMRGKVC*AHRIRRRRRIR
Trigger: TCTGATTCTTCGTCTTCTGCGAATTCTGTGAGCCAAGCAGACCTTCCCTCTCATCCCAAGGAGCCAGAGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368409.8
CDS CAA 90 bp ATCTTGGGAGGACTCTGGCTCCTTGGGATGAGAGGGAAGGTCTGCTaGGCTCACAGAATTCGCAGAAGACGAAGAATCAGAAGCAGCAGT +
Preference number: 6 (lower is better)
Translates to: ILGGLWLLGMRGKVC*AHRIRRRRRIRSSS
Trigger: ACTGCTGCTTCTGATTCTTCGTCTTCTGCGAATTCTGTGAGCCAAGCAGACCTTCCCTCTCATCCCAAGGAGCCAGAGTCCTCCCAAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368409.8