Pregenerated sensors for EFHC2 (Homo sapiens)
Ensembl gene IDs: ENSG00000183690Ensembl transcript IDs: ENST00000343571.3, ENST00000420999.2
Found 89 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CATTACAAATATAAATACTGCATATGTTTCCAGTGTGTGTGCACGTaGGTGTGTGTGTGTGTGTGTGTGTGTGTTGGAGGTTCTTTTTCT | + |
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Preference number: 1 (lower is better) Translates to: HYKYKYCICFQCVCT*VCVCVCVCVGGSFS Trigger: AGAAAAAGAACCTCCAACACACACACACACACACACACACACGCACGTGCACACACACTGGAAACATATGCAGTATTTATATTTGTAATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000420999.2 |
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| 3UTR CAA 90 bp | TCCAGTGTGTGTGCACGTGCGTGTGTGTGTGTGTGTGTGTGTGTGTaGGAGGTTCTTTTTCTTCCCATAGCTTTACTAAGTTCAAAAGAT | + |
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Preference number: 2 (lower is better) Translates to: SSVCARACVCVCVCV*EVLFLPIALLSSKD Trigger: ATCTTTTGAACTTAGTAAAGCTATGGGAAGAAAAAGAACCTCCAACACACACACACACACACACACACACGCACGTGCACACACACTGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000420999.2 |
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| 3UTR-3UTR TCA 90 bp | GTGTGTGTGTGTGTGTGTGTTGGAGGTTCTTTTTCTTCCCATAGCTTTACTAAGGTCGGCAATGTAACATaGTGTTCTGTAAAACTAACA | + |
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Preference number: 2 (lower is better) Translates to: VCVCVCVGGSFSSHSFTKVGNVT*CSVKLT Trigger: TGTTAGTTTTACAGAACATCATGTTACATTGCCGAC...CTTAGTAAAGCTATGGGAAGAAAAAGAACCTCCAACACACACACACACACACAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000420999.2 |
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| 3UTR GCA 72 bp | TATAAATACTGCATATGTTTCCAGTGTGTGTGCACGTaGGTGTGTGTGTGTGTGTGTGTGTGTGTTGGAGGT | + |
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Preference number: 3 (lower is better) Translates to: YKYCICFQCVCT*VCVCVCVCVGG Trigger: ACCTCCAACACACACACACACACACACACACACGCACGTGCACACACACTGGAAACATATGCAGTATTTATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000420999.2 |
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| 3UTR-3UTR CAA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTTGGAGGTTCTTTTTCTTCCCATAGCTTTGGTTTAAGAATTATTTaGATGAGGTGGGTTGCTACA | + |
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Preference number: 3 (lower is better) Translates to: VCVCVCVCVGGSFSSHSFGLRII*MRWVAT Trigger: TGTAGCAACCCACCTCATCAAAATAATTCTTAAACC...AAAGCTATGGGAAGAAAAAGAACCTCCAACACACACACACACACACACACACAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000420999.2 |
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| CDS-3UTR TCA 90 bp | GTGTGTGTGTGTGTGTGTGTTGGAGGTTCTTTTTCTTCCCATAGCTTTACTAAGTTCCCACGTTGCGGTTaGAGCTGTTGCCCGGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCVGGSFSSHSFTKFPRCG*SCCPAA Trigger: TGCTGCCGGGCAACAGCTTCAACCGCAACGTGGGAA...CTTAGTAAAGCTATGGGAAGAAAAAGAACCTCCAACACACACACACACACACAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000420999.2 |
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| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTTGGAGGTTCTTTTTCTTCCCATAGCTTTGCAGAGGCAGGGCCATaGCGCTCAGTGTCCGAAAAT | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCVCVGGSFSSHSFAEAGP*RSVSEN Trigger: ATTTTCGGACACTGAGCGCCATGGCCCTGCCTCTGC...AAAGCTATGGGAAGAAAAAGAACCTCCAACACACACACACACACACACACACAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000420999.2 |
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| CDS-3UTR TCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTTGGAGGTTCTTTTTCTTCCCATAGCTTTGGAAGAGTAATCCGATaGCGCCGGATAGAAGTCCCT | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCVCVGGSFSSHSFGRVIR*RRIEVP Trigger: AGGGACTTCTATCCGGCGTCATCGGATTACTCTTCC...AAAGCTATGGGAAGAAAAAGAACCTCCAACACACACACACACACACACACACAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000420999.2 |
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| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTTGGAGGTTCTTTTTCTTCCCATAGCTTTCTAGGGTGGGGCGCGTaGGATGTGTGTGTAAAACAA | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCVCVGGSFSSHSFLGWGA*DVCVKQ Trigger: TTGTTTTACACACACATCCCACGCGCCCCACCCTAG...AAAGCTATGGGAAGAAAAAGAACCTCCAACACACACACACACACACACACACAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000420999.2 |
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| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTTGGAGGTTCTTTTTCTTCCCATAGCTTTTTTAAACCTCTAGGGTaGGGCGCGTGGGATGTGTGT | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCVCVGGSFSSHSFFKPLG*GAWDVC Trigger: ACACACATCCCACGCGCCCCACCCTAGAGGTTTAAA...AAAGCTATGGGAAGAAAAAGAACCTCCAACACACACACACACACACACACACAC 48% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENST00000420999.2 |
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| CDS-3UTR TCA 90 bp | GTGTGTGTGTGTGTGTGTGTTGGAGGTTCTTTTTCTTCCCATAGCTTTACTAAGGATGAGGTGTGGGCTTaGGGTCTATGCAGTTACGGA | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCVGGSFSSHSFTKDEVWA*GLCSYG Trigger: TCCGTAACTGCATAGACCTCAAGCCCACACCTCATC...CTTAGTAAAGCTATGGGAAGAAAAAGAACCTCCAACACACACACACACACACAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000420999.2 |
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| CDS-3UTR TCA 90 bp | GTGTGTGTGTGTGTGTGTGTTGGAGGTTCTTTTTCTTCCCATAGCTTTACTAAGTTGAAGTTCCTCCGATaGGGTGTGGGCTTGAGGTCT | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCVGGSFSSHSFTKLKFLR*GVGLRS Trigger: AGACCTCAAGCCCACACCTCATCGGAGGAACTTCAA...CTTAGTAAAGCTATGGGAAGAAAAAGAACCTCCAACACACACACACACACACAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000420999.2 |
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| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTTGGAGGTTCTTTTTCTTCCCATAGCTTTCTTTTGCCCCAGAAGTaGTTCTCCACCTATTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCVCVGGSFSSHSFLLPQK*FSTYSR Trigger: CCTGGAATAGGTGGAGAACCACTTCTGGGGCAAAAG...AAAGCTATGGGAAGAAAAAGAACCTCCAACACACACACACACACACACACACAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000420999.2 |
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| CDS-3UTR TCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTTGGAGGTTCTTTTTCTTCCCATAGCTTTCATTCACATTCACCGTaGCTCCAATGTACAGCTCCT | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCVCVGGSFSSHSFHSHSP*LQCTAP Trigger: AGGAGCTGTACATTGGAGTCACGGTGAATGTGAATG...AAAGCTATGGGAAGAAAAAGAACCTCCAACACACACACACACACACACACACAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000420999.2 |
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| CDS-3UTR GCA 90 bp | GTGTGTGTGTGTGTGTGTGTTGGAGGTTCTTTTTCTTCCCATAGCTTTACTAAGCCATATCTGAACATGTaGCCTCAGGCACACGGTAGT | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCVGGSFSSHSFTKPYLNM*PQAHGS Trigger: ACTACCGTGTGCCTGAGGGCACATGTTCAGATATGG...CTTAGTAAAGCTATGGGAAGAAAAAGAACCTCCAACACACACACACACACACAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000420999.2 |
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| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTTGGAGGTTCTTTTTCTTCCCATAGCTTTACTAAGTTCTGGACATTGCACTaGGGGATTCACTTTGACCCC | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCVGGSFSSHSFTKFWTLH*GIHFDP Trigger: GGGGTCAAAGTGAATCCCCCAGTGCAATGTCCAGAA...CTTAGTAAAGCTATGGGAAGAAAAAGAACCTCCAACACACACACACACACACAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000420999.2 |
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| CDS-3UTR TCA 90 bp | GTGTGTGTGTGTGTGTGTGTTGGAGGTTCTTTTTCTTCCCATAGCTTTACTAAGTTTCGCAGGAATAGGTaGTGGCATACCAAGCCAAAC | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCVGGSFSSHSFTKFRRNR*WHTKPN Trigger: GTTTGGCTTGGTATGCCATCACCTATTCCTGCGAAA...CTTAGTAAAGCTATGGGAAGAAAAAGAACCTCCAACACACACACACACACACAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000420999.2 |
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| CDS-3UTR TCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTTGGAGGTTCTTTTTCTTCCCATAGCTTTCAATGTTGGGATTTGTaGAACTTCTCCTTTCCCACG | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCVCVGGSFSSHSFQCWDL*NFSFPT Trigger: CGTGGGAAAGGAGAAGTTTCACAAATCCCAACATTG...AAAGCTATGGGAAGAAAAAGAACCTCCAACACACACACACACACACACACACAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000420999.2 |
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| CDS-3UTR TCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTTGGAGGTTCTTTTTCTTCCCATAGCTTTATCAAAGGCTACCCATaGTGGTACATCACTTCCATC | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCVCVGGSFSSHSFIKGYP*WYITSI Trigger: GATGGAAGTGATGTACCATCATGGGTAGCCTTTGAT...AAAGCTATGGGAAGAAAAAGAACCTCCAACACACACACACACACACACACACAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000420999.2 |
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| CDS-3UTR TCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTTGGAGGTTCTTTTTCTTCCCATAGCTTTAGAAGTAATGCAGGATaGGTTCTCTACGGTCTCCAA | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCVCVGGSFSSHSFRSNAG*VLYGLQ Trigger: TTGGAGACCGTAGAGAACTCATCCTGCATTACTTCT...AAAGCTATGGGAAGAAAAAGAACCTCCAACACACACACACACACACACACACAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000420999.2 |
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| CDS-3UTR TCA 90 bp | GTGTGTGTGTGTGTGTGTGTTGGAGGTTCTTTTTCTTCCCATAGCTTTACTAAGCCCACCAGCAATTCCTaGATTCCTCTCTATAGGTTC | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCVGGSFSSHSFTKPTSNS*IPLYRF Trigger: GAACCTATAGAGAGGAATTCAGGAATTGCTGGTGGG...CTTAGTAAAGCTATGGGAAGAAAAAGAACCTCCAACACACACACACACACACAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000420999.2 |
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| CDS-3UTR TCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTTGGAGGTTCTTTTTCTTCCCATAGCTTTTCTCTCTTTAAGGTATaGTGCTGGTTGCAATTCAGG | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCVCVGGSFSSHSFSLFKV*CWLQFR Trigger: CCTGAATTGCAACCAGCATCATACCTTAAAGAGAGA...AAAGCTATGGGAAGAAAAAGAACCTCCAACACACACACACACACACACACACAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000420999.2 |
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| CDS-3UTR TCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTTGGAGGTTCTTTTTCTTCCCATAGCTTTCACAGTCATAAATCTTaGATGTCCGGCCATAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCVCVGGSFSSHSFHSHKS*MSGHRR Trigger: TCTTCTATGGCCGGACATTCAAGATTTATGACTGTG...AAAGCTATGGGAAGAAAAAGAACCTCCAACACACACACACACACACACACACAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000420999.2 |
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| CDS-3UTR TCA 90 bp | GTGTGTGTGTGTGTGTGTGTTGGAGGTTCTTTTTCTTCCCATAGCTTTACTAAGACAGCTCCTCGGCCTTaGTATATTCAGATAGTTCAC | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCVGGSFSSHSFTKTAPRP*YIQIVH Trigger: GTGAACTATCTGAATATATCAAGGCCGAGGAGCTGT...CTTAGTAAAGCTATGGGAAGAAAAAGAACCTCCAACACACACACACACACACAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000420999.2 |
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| CDS-3UTR GCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTTGGAGGTTCTTTTTCTTCCCATAGCTTTTTAGGCTTTATCTTTTaGCCCAGAAGTGGTTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCVCVGGSFSSHSFLGFIF*PRSGSP Trigger: TGGAGAACCACTTCTGGGGCAAAAGATAAAGCCTAA...AAAGCTATGGGAAGAAAAAGAACCTCCAACACACACACACACACACACACACAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000420999.2 |
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| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTTGGAGGTTCTTTTTCTTCCCATAGCTTTCACTCAAAGGTAATCTaGAGGATTTGCACAGCCTTT | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCVCVGGSFSSHSFHSKVI*RICTAF Trigger: AAAGGCTGTGCAAATCCTCCAGATTACCTTTGAGTG...AAAGCTATGGGAAGAAAAAGAACCTCCAACACACACACACACACACACACACAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000420999.2 |
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| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTTGGAGGTTCTTTTTCTTCCCATAGCTTTTGTGTGTGTGTGTGTTaGAGGTTCTTTTTCTTCCCA | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCVCVGGSFSSHSFCVCVC*RFFFFP Trigger: TGGGAAGAAAAAGAACCTCCAACACACACACACACA...AAAGCTATGGGAAGAAAAAGAACCTCCAACACACACACACACACACACACACAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000420999.2 |
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| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTTGGAGGTTCTTTTTCTTCCCATAGCTTTACTAAGCATGTAAGGATCTTCTaGACATTGCACTGGGGGATT | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCVGGSFSSHSFTKHVRIF*TLHWGI Trigger: AATCCCCCAGTGCAATGTCCAGAAGATCCTTACATG...CTTAGTAAAGCTATGGGAAGAAAAAGAACCTCCAACACACACACACACACACAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000420999.2 |
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| CDS-3UTR TCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTTGGAGGTTCTTTTTCTTCCCATAGCTTTTCTGGTTCATTTACTTaGATTGTGTCATCTTCAGGG | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCVCVGGSFSSHSFSGSFT*IVSSSG Trigger: CCCTGAAGATGACACAATTCAAGTAAATGAACCAGA...AAAGCTATGGGAAGAAAAAGAACCTCCAACACACACACACACACACACACACAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000420999.2 |
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| CDS-3UTR TCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTTGGAGGTTCTTTTTCTTCCCATAGCTTTCGGATAGAAGTCCCTTaGAGTAATCCACTATTTTTC | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCVCVGGSFSSHSFRIEVP*SNPLFF Trigger: GAAAAATAGTGGATTACTTCAAGGGACTTCTATCCG...AAAGCTATGGGAAGAAAAAGAACCTCCAACACACACACACACACACACACACAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000420999.2 |
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| CDS-3UTR TCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTTGGAGGTTCTTTTTCTTCCCATAGCTTTAGTCACCATATGAATTaGGAACTGCTCGATCTGTTA | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCVCVGGSFSSHSFSHHMN*ELLDLL Trigger: TAACAGATCGAGCAGTTCTCAATTCATATGGTGACT...AAAGCTATGGGAAGAAAAAGAACCTCCAACACACACACACACACACACACACAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000420999.2 |
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| CDS-3UTR TCA 90 bp | GTGTGTGTGTGTGTGTGTGTTGGAGGTTCTTTTTCTTCCCATAGCTTTACTAAGTATAGGTTCAAACACTaGAATGGTGTCATCACCGAG | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCVGGSFSSHSFTKYRFKH*NGVITE Trigger: CTCGGTGATGACACCATTTCAGTGTTTGAACCTATA...CTTAGTAAAGCTATGGGAAGAAAAAGAACCTCCAACACACACACACACACACAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000420999.2 |
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| CDS-3UTR GCA 90 bp | GTGTGTGTGTGTGTGTGTGTTGGAGGTTCTTTTTCTTCCCATAGCTTTACTAAGCACACGGTAGTGACGTaGAATGGTTACAAATTCTTG | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCVGGSFSSHSFTKHTVVT*NGYKFL Trigger: CAAGAATTTGTAACCATTGCACGTCACTACCGTGTG...CTTAGTAAAGCTATGGGAAGAAAAAGAACCTCCAACACACACACACACACACAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000420999.2 |
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| CDS-3UTR GCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTTGGAGGTTCTTTTTCTTCCCATAGCTTTTCCACCATATTTGTGTaGTTAGAGTCAGCAGCTTTA | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCVCVGGSFSSHSFSTIFV*LESAAL Trigger: TAAAGCTGCTGACTCTAAGCACACAAATATGGTGGA...AAAGCTATGGGAAGAAAAAGAACCTCCAACACACACACACACACACACACACAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000420999.2 |
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| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTTGGAGGTTCTTTTTCTTCCCATAGCTTTACTAAGGGTAGTGACGTGCAATaGTTACAAATTCTTGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCVGGSFSSHSFTKGSDVQ*LQILAL Trigger: CAGAGCAAGAATTTGTAACCATTGCACGTCACTACC...CTTAGTAAAGCTATGGGAAGAAAAAGAACCTCCAACACACACACACACACACAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000420999.2 |
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| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTTGGAGGTTCTTTTTCTTCCCATAGCTTTTTCTTGAACTTTTCGTaGGCCAGTGCGATTAAGAAA | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCVCVGGSFSSHSFFLNFS*ASAIKK Trigger: TTTCTTAATCGCACTGGCCCACGAAAAGTTCAAGAA...AAAGCTATGGGAAGAAAAAGAACCTCCAACACACACACACACACACACACACAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000420999.2 |
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| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTTGGAGGTTCTTTTTCTTCCCATAGCTTTACTAAGTTGCAATTCAGGCACTaGATTCTTTCTCCAGTTCAG | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCVGGSFSSHSFTKLQFRH*ILSPVQ Trigger: CTGAACTGGAGAAAGAATCCAGTGCCTGAATTGCAA...CTTAGTAAAGCTATGGGAAGAAAAAGAACCTCCAACACACACACACACACACAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000420999.2 |
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| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTTGGAGGTTCTTTTTCTTCCCATAGCTTTAGAATTGACCAAAACTaGCATGGTTATTCCTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCVCVGGSFSSHSFRIDQN*HGYSSS Trigger: AGAGGAGGAATAACCATGCCAGTTTTGGTCAATTCT...AAAGCTATGGGAAGAAAAAGAACCTCCAACACACACACACACACACACACACAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000420999.2 |
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| CDS-3UTR GCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTTGGAGGTTCTTTTTCTTCCCATAGCTTTTACAAATTCTTGCTCTaGAAGGTTTCCAACAGTCAA | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCVCVGGSFSSHSFYKFLL*KVSNSQ Trigger: TTGACTGTTGGAAACCTTGCAGAGCAAGAATTTGTA...AAAGCTATGGGAAGAAAAAGAACCTCCAACACACACACACACACACACACACAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000420999.2 |
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| CDS-3UTR GCA 90 bp | GTGTGTGTGTGTGTGTGTGTTGGAGGTTCTTTTTCTTCCCATAGCTTTACTAAGGCAGCTTTAAATACCTaGTTGAGCTCTCTGGATTTT | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCVGGSFSSHSFTKAALNT*LSSLDF Trigger: AAAATCCAGAGAGCTCAAGCAGGTATTTAAAGCTGC...CTTAGTAAAGCTATGGGAAGAAAAAGAACCTCCAACACACACACACACACACAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000420999.2 |
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| CDS-3UTR TCA 90 bp | GTGTGTGTGTGTGTGTGTGTTGGAGGTTCTTTTTCTTCCCATAGCTTTACTAAGTATAAAGTCACCATATaGATTGAGAACTGCTCGATC | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCVGGSFSSHSFTKYKVTI*IENCSI Trigger: GATCGAGCAGTTCTCAATTCATATGGTGACTTTATA...CTTAGTAAAGCTATGGGAAGAAAAAGAACCTCCAACACACACACACACACACAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000420999.2 |
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| CDS-3UTR TCA 90 bp | GTGTGTGTGTGTGTGTGTGTTGGAGGTTCTTTTTCTTCCCATAGCTTTACTAAGTATACTCATCAGCATTaGGCAAACGAAATAGGTAAC | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCVGGSFSSHSFTKYTHQH*ANEIGN Trigger: GTTACCTATTTCGTTTGCTCAATGCTGATGAGTATA...CTTAGTAAAGCTATGGGAAGAAAAAGAACCTCCAACACACACACACACACACAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000420999.2 |
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| CDS-3UTR GCA 90 bp | GTGTGTGTGTGTGTGTGTGTTGGAGGTTCTTTTTCTTCCCATAGCTTTACTAAGATGGTTACAAATTCTTaGTCTGCAAGGTTTCCAACA | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCVGGSFSSHSFTKMVTNS*SARFPT Trigger: TGTTGGAAACCTTGCAGAGCAAGAATTTGTAACCAT...CTTAGTAAAGCTATGGGAAGAAAAAGAACCTCCAACACACACACACACACACAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000420999.2 |
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| CDS-3UTR GCA 90 bp | GTGTGTGTGTGTGTGTGTGTTGGAGGTTCTTTTTCTTCCCATAGCTTTACTAAGAAAAACGGAGTATATTaGTTTTGGAGCCATAGCTGT | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCVGGSFSSHSFTKKNGVY*FWSHSC Trigger: ACAGCTATGGCTCCAAAAGCAATATACTCCGTTTTT...CTTAGTAAAGCTATGGGAAGAAAAAGAACCTCCAACACACACACACACACACAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000420999.2 |
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| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTTGGAGGTTCTTTTTCTTCCCATAGCTTTACTAAGGGAGTATATTGCTTTTaGAGCCATAGCTGTCTTTTT | + |
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Preference number: 4 (lower is better) Translates to: VCVCVCVGGSFSSHSFTKGVYCF*SHSCLF Trigger: AAAAAGACAGCTATGGCTCCAAAAGCAATATACTCC...CTTAGTAAAGCTATGGGAAGAAAAAGAACCTCCAACACACACACACACACACAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000420999.2 |
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| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTTGGAGGTTCTTTTTCTTCCCATAGCTTTACTAAGGTTCAAACACTGAAATaGTGTCATCACCGAGATAAT | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVGGSFSSHSFTKVQTLK*CHHRDN Trigger: ATTATCTCGGTGATGACACCATTTCAGTGTTTGAAC...CTTAGTAAAGCTATGGGAAGAAAAAGAACCTCCAACACACACACACACACACAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000420999.2 |
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| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTGTGTTGGAGGTTCTTTTTCTTCCCATAGCTTTACTAAGAGAGGTACATGGCTATaGGTTTTAATCAAATGTACA | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVCVGGSFSSHSFTKRGTWL*VLIKCT Trigger: TGTACATTTGATTAAAACCCATAGCCATGTACCTCT...CTTAGTAAAGCTATGGGAAGAAAAAGAACCTCCAACACACACACACACACACAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000420999.2 |
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| CDS-3UTR CAA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTTGGAGGTTCTTTTTCTTCCCATAGCTTTTTGCGGTTGAAGCTGTaGCCCGGCAGCAGAGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VCVCVCVCVGGSFSSHSFLRLKL*PGSRGR Trigger: CCTGCCTCTGCTGCCGGGCAACAGCTTCAACCGCAA...AAAGCTATGGGAAGAAAAAGAACCTCCAACACACACACACACACACACACACAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000420999.2 |
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| CDS-3UTR CAA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTTGGAGGTTCTTTTTCTTCCCATAGCTTTTTTCCCACGTTGCGGTaGAAGCTGTTGCCCGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VCVCVCVCVGGSFSSHSFFPTLR*KLLPGS Trigger: GCTGCCGGGCAACAGCTTCAACCGCAACGTGGGAAA...AAAGCTATGGGAAGAAAAAGAACCTCCAACACACACACACACACACACACACAC 51% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENST00000420999.2 |
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| CDS-3UTR CAA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTTGGAGGTTCTTTTTCTTCCCATAGCTTTTTCTCCTTTCCCACGTaGCGGTTGAAGCTGTTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: VCVCVCVCVGGSFSSHSFFSFPT*RLKLLP Trigger: GGGCAACAGCTTCAACCGCAACGTGGGAAAGGAGAA...AAAGCTATGGGAAGAAAAAGAACCTCCAACACACACACACACACACACACACAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000420999.2 |
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| CDS-3UTR CAA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTTGGAGGTTCTTTTTCTTCCCATAGCTTTCTAGGTGGGCAATTCTaGGGTAGCTTACTCCTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: VCVCVCVCVGGSFSSHSFLGGQF*GSLLLR Trigger: CCGGAGGAGTAAGCTACCCAAGAATTGCCCACCTAG...AAAGCTATGGGAAGAAAAAGAACCTCCAACACACACACACACACACACACACAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000420999.2 |
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| CDS CCA 90 bp | CCATATCTGAACATGTGCCCTCAGGCACACGGTAGTGACGTGCAATaGTTACAAATTCTTGCTCTGCAAGGTTTCCAACAGTCAAAGACA | + |
|
Preference number: 5 (lower is better) Translates to: PYLNMCPQAHGSDVQ*LQILALQGFQQSKT Trigger: TGTCTTTGACTGTTGGAAACCTTGCAGAGCAAGAATTTGTAACCATTGCACGTCACTACCGTGTGCCTGAGGGCACATGTTCAGATATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000343571.3 ENST00000420999.2 |
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| CDS-3UTR CAA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTTGGAGGTTCTTTTTCTTCCCATAGCTTTTGTTATCTGGCCTGGTaGATAGACTCTAGGTGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: VCVCVCVCVGGSFSSHSFCYLAW*IDSRWA Trigger: TGCCCACCTAGAGTCTATCAACCAGGCCAGATAACA...AAAGCTATGGGAAGAAAAAGAACCTCCAACACACACACACACACACACACACAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000420999.2 |
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| CDS GCA 90 bp | ACTTTTCGTGGGCCAGTGCGATTAAGAAATCCATATCTGAACATGTaGCCTCAGGCACACGGTAGTGACGTGCAATGGTTACAAATTCTT | + |
|
Preference number: 5 (lower is better) Translates to: TFRGPVRLRNPYLNM*PQAHGSDVQWLQIL Trigger: AAGAATTTGTAACCATTGCACGTCACTACCGTGTGCCTGAGGGCACATGTTCAGATATGGATTTCTTAATCGCACTGGCCCACGAAAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000343571.3 ENST00000420999.2 |
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| CDS-3UTR CAA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTTGGAGGTTCTTTTTCTTCCCATAGCTTTTACGGTCTCCAAACATaGAGACTGAGTCATCCCACA | + |
|
Preference number: 5 (lower is better) Translates to: VCVCVCVCVGGSFSSHSFYGLQT*RLSHPT Trigger: TGTGGGATGACTCAGTCTCAATGTTTGGAGACCGTA...AAAGCTATGGGAAGAAAAAGAACCTCCAACACACACACACACACACACACACAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000420999.2 |
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| CDS-3UTR CAA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTTGGAGGTTCTTTTTCTTCCCATAGCTTTCAGGTAGCCATCCGCTaGGTTCTTTATAAAGTCACC | + |
|
Preference number: 5 (lower is better) Translates to: VCVCVCVCVGGSFSSHSFQVAIR*VLYKVT Trigger: GGTGACTTTATAAAGAACCAAGCGGATGGCTACCTG...AAAGCTATGGGAAGAAAAAGAACCTCCAACACACACACACACACACACACACAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000420999.2 |
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| CDS-3UTR CAA 90 bp | GTGTGTGTGTGTGTGTGTGTTGGAGGTTCTTTTTCTTCCCATAGCTTTACTAAGTTTCTTCCCCACACATaGATGGTGACTCCTAGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: VCVCVCVGGSFSSHSFTKFLPHT*MVTPRD Trigger: GTCCCTAGGAGTCACCATCAATGTGTGGGGAAGAAA...CTTAGTAAAGCTATGGGAAGAAAAAGAACCTCCAACACACACACACACACACAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000420999.2 |
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| CDS-3UTR CAA 90 bp | GTGTGTGTGTGTGTGTGTGTTGGAGGTTCTTTTTCTTCCCATAGCTTTACTAAGGTGTGTGTGTGTGTGTaGGAGGTTCTTTTTCTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: VCVCVCVGGSFSSHSFTKVCVCV*EVLFLP Trigger: GGGAAGAAAAAGAACCTCCAACACACACACACACAC...CTTAGTAAAGCTATGGGAAGAAAAAGAACCTCCAACACACACACACACACACAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000420999.2 |
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| CDS-3UTR CAA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTTGGAGGTTCTTTTTCTTCCCATAGCTTTGCAAAAGCCCCAATGTaGGGATTTGTGAAACTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: VCVCVCVCVGGSFSSHSFAKAPM*GFVKLL Trigger: GAGAAGTTTCACAAATCCCAACATTGGGGCTTTTGC...AAAGCTATGGGAAGAAAAAGAACCTCCAACACACACACACACACACACACACAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000420999.2 |
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| CDS-3UTR CAA 90 bp | GTGTGTGTGTGTGTGTGTGTTGGAGGTTCTTTTTCTTCCCATAGCTTTACTAAGAGGATCTTCTGGACATaGCACTGGGGGATTCACTTT | + |
|
Preference number: 5 (lower is better) Translates to: VCVCVCVGGSFSSHSFTKRIFWT*HWGIHF Trigger: AAAGTGAATCCCCCAGTGCAATGTCCAGAAGATCCT...CTTAGTAAAGCTATGGGAAGAAAAAGAACCTCCAACACACACACACACACACAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000420999.2 |
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| CDS TCA 90 bp | ATCGAACAGGTAGCCATCCGCTTGGTTCTTTATAAAGTCACCATATaGATTGAGAACTGCTCGATCTGTTATCTGGCCTGGTTGATAGAC | + |
|
Preference number: 5 (lower is better) Translates to: IEQVAIRLVLYKVTI*IENCSICYLAWLID Trigger: GTCTATCAACCAGGCCAGATAACAGATCGAGCAGTTCTCAATTCATATGGTGACTTTATAAAGAACCAAGCGGATGGCTACCTGTTCGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000420999.2 |
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| CDS GCA 90 bp | CTCAGGCACACGGTAGTGACGTGCAATGGTTACAAATTCTTGCTCTaGAAGGTTTCCAACAGTCAAAGACATCAATATGTCTCTGAATGT | + |
|
Preference number: 5 (lower is better) Translates to: LRHTVVTCNGYKFLL*KVSNSQRHQYVSEC Trigger: ACATTCAGAGACATATTGATGTCTTTGACTGTTGGAAACCTTGCAGAGCAAGAATTTGTAACCATTGCACGTCACTACCGTGTGCCTGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000420999.2 |
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| CDS-3UTR CAA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTTGGAGGTTCTTTTTCTTCCCATAGCTTTGGTAATCTGGAGGATTaGCACAGCCTTTTAATGTCT | + |
|
Preference number: 5 (lower is better) Translates to: VCVCVCVCVGGSFSSHSFGNLED*HSLLMS Trigger: AGACATTAAAAGGCTGTGCAAATCCTCCAGATTACC...AAAGCTATGGGAAGAAAAAGAACCTCCAACACACACACACACACACACACACAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000420999.2 |
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| CDS-3UTR CAA 90 bp | GTGTGTGTGTGTGTGTGTGTTGGAGGTTCTTTTTCTTCCCATAGCTTTACTAAGTTTAGGCTTTATCTTTaGCCCCAGAAGTGGTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VCVCVCVGGSFSSHSFTKFRLYL*PQKWFS Trigger: GGAGAACCACTTCTGGGGCAAAAGATAAAGCCTAAA...CTTAGTAAAGCTATGGGAAGAAAAAGAACCTCCAACACACACACACACACACAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000420999.2 |
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| CDS-3UTR CAA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTTGGAGGTTCTTTTTCTTCCCATAGCTTTGCTTTAAATACCTGCTaGAGCTCTCTGGATTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: VCVCVCVCVGGSFSSHSFALNTC*SSLDFP Trigger: AGGAAAATCCAGAGAGCTCAAGCAGGTATTTAAAGC...AAAGCTATGGGAAGAAAAAGAACCTCCAACACACACACACACACACACACACAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000420999.2 |
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| CDS GCA 90 bp | CTCAGGCACACGGTAGTGACGTGCAATGGTTACAAATTCTTGCTCTaGAAGGTTTCCAACAGTCAAAGACATCAATATGTCTATTTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: LRHTVVTCNGYKFLL*KVSNSQRHQYVYFQ Trigger: CTGAAAATAGACATATTGATGTCTTTGACTGTTGGAAACCTTGCAGAGCAAGAATTTGTAACCATTGCACGTCACTACCGTGTGCCTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000343571.3 |
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| CDS GCA 90 bp | CTTCCATCTCCTTTAGGATATATGCTACATTTAGGCTTTATCTTTTaGCCCAGAAGTGGTTCTCCACCTATTCCAGGCTTTTCATCACTC | + |
|
Preference number: 5 (lower is better) Translates to: LPSPLGYMLHLGFIF*PRSGSPPIPGFSSL Trigger: GAGTGATGAAAAGCCTGGAATAGGTGGAGAACCACTTCTGGGGCAAAAGATAAAGCCTAAATGTAGCATATATCCTAAAGGAGATGGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000420999.2 |
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| CDS-3UTR CAA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTTGGAGGTTCTTTTTCTTCCCATAGCTTTAATGGTTACAAATTCTaGCTCTGCAAGGTTTCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: VCVCVCVCVGGSFSSHSFNGYKF*LCKVSN Trigger: GTTGGAAACCTTGCAGAGCAAGAATTTGTAACCATT...AAAGCTATGGGAAGAAAAAGAACCTCCAACACACACACACACACACACACACAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000420999.2 |
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| CDS-3UTR CAA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTTGGAGGTTCTTTTTCTTCCCATAGCTTTTCCAAGTCAACACATTaGTCTGTGACTAGTTTTGCA | + |
|
Preference number: 5 (lower is better) Translates to: VCVCVCVCVGGSFSSHSFSKSTH*SVTSFA Trigger: TGCAAAACTAGTCACAGACAAATGTGTTGACTTGGA...AAAGCTATGGGAAGAAAAAGAACCTCCAACACACACACACACACACACACACAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000420999.2 |
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| CDS-3UTR CAA 90 bp | GTGTGTGTGTGTGTGTGTGTTGGAGGTTCTTTTTCTTCCCATAGCTTTACTAAGTACAGCTCCTCGGCCTaGATATATTCAGATAGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: VCVCVCVGGSFSSHSFTKYSSSA*IYSDSS Trigger: TGAACTATCTGAATATATCAAGGCCGAGGAGCTGTA...CTTAGTAAAGCTATGGGAAGAAAAAGAACCTCCAACACACACACACACACACAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000420999.2 |
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| CDS TCA 90 bp | GTCCTTCAAAAAGGTCCAGTAGTCAATGTATTTCGCAGGAATAGGTaGTGGCATACCAAGCCAAACATCTTCACATCTCTCTTTAAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: VLQKGPVVNVFRRNR*WHTKPNIFTSLFKV Trigger: TACCTTAAAGAGAGATGTGAAGATGTTTGGCTTGGTATGCCATCACCTATTCCTGCGAAATACATTGACTACTGGACCTTTTTGAAGGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000343571.3 ENST00000420999.2 |
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| CDS-3UTR CAA 90 bp | GTGTGTGTGTGTGTGTGTGTTGGAGGTTCTTTTTCTTCCCATAGCTTTACTAAGAACATCATAACATTGTaGCAAAAGCCCCAATGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: VCVCVCVGGSFSSHSFTKNIITL*QKPQCW Trigger: CCAACATTGGGGCTTTTGCAACAATGTTATGATGTT...CTTAGTAAAGCTATGGGAAGAAAAAGAACCTCCAACACACACACACACACACAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000420999.2 |
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| CDS-3UTR CAA 90 bp | GTGTGTGTGTGTGTGTGTGTTGGAGGTTCTTTTTCTTCCCATAGCTTTACTAAGACCAACATCATAACATaGTTGCAAAAGCCCCAATGT | + |
|
Preference number: 5 (lower is better) Translates to: VCVCVCVGGSFSSHSFTKTNIIT*LQKPQC Trigger: ACATTGGGGCTTTTGCAACAATGTTATGATGTTGGT...CTTAGTAAAGCTATGGGAAGAAAAAGAACCTCCAACACACACACACACACACAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000420999.2 |
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| CDS-3UTR CAA 90 bp | GTGTGTGTGTGTGTGTGTGTTGGAGGTTCTTTTTCTTCCCATAGCTTTACTAAGCTCTGGTTCATTTACTaGAATTGTGTCATCTTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VCVCVCVGGSFSSHSFTKLWFIY*NCVIFR Trigger: CCTGAAGATGACACAATTCAAGTAAATGAACCAGAG...CTTAGTAAAGCTATGGGAAGAAAAAGAACCTCCAACACACACACACACACACAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000420999.2 |
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| CDS-3UTR CAA 90 bp | GTGTGTGTGTGTGTGTGTGTTGGAGGTTCTTTTTCTTCCCATAGCTTTACTAAGAAGTCACCATATGAATaGAGAACTGCTCGATCTGTT | + |
|
Preference number: 5 (lower is better) Translates to: VCVCVCVGGSFSSHSFTKKSPYE*RTARSV Trigger: AACAGATCGAGCAGTTCTCAATTCATATGGTGACTT...CTTAGTAAAGCTATGGGAAGAAAAAGAACCTCCAACACACACACACACACACAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000420999.2 |
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| CDS-3UTR CAA 90 bp | GTGTGTGTGTGTGTGTGTGTTGGAGGTTCTTTTTCTTCCCATAGCTTTACTAAGCACTGTCTTCAAACCTaGACAATAAGGATTCTAGAA | + |
|
Preference number: 5 (lower is better) Translates to: VCVCVCVGGSFSSHSFTKHCLQT*TIRILE Trigger: TTCTAGAATCCTTATTGTCAAGGTTTGAAGACAGTG...CTTAGTAAAGCTATGGGAAGAAAAAGAACCTCCAACACACACACACACACACAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000420999.2 |
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| CDS-3UTR CAA 90 bp | GTGTGTGTGTGTGTGTGTGTTGGAGGTTCTTTTTCTTCCCATAGCTTTACTAAGGGTTTAAGAATTATTTaGATGAGGTGGGTTGCTACA | + |
|
Preference number: 5 (lower is better) Translates to: VCVCVCVGGSFSSHSFTKGLRII*MRWVAT Trigger: TGTAGCAACCCACCTCATCAAAATAATTCTTAAACC...CTTAGTAAAGCTATGGGAAGAAAAAGAACCTCCAACACACACACACACACACAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000420999.2 |
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| CDS-3UTR CAA 90 bp | GTGTGTGTGTGTGTGTGTGTTGGAGGTTCTTTTTCTTCCCATAGCTTTACTAAGGTTCATTTACTTGAATaGTGTCATCTTCAGGGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: VCVCVCVGGSFSSHSFTKVHLLE*CHLQGR Trigger: TCTACCCTGAAGATGACACAATTCAAGTAAATGAAC...CTTAGTAAAGCTATGGGAAGAAAAAGAACCTCCAACACACACACACACACACAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000420999.2 |
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| CDS GCA 72 bp | GGGCCAGTGCGATTAAGAAATCCATATCTGAACATGTaGCCTCAGGCACACGGTAGTGACGTGCAATGGTTA | + |
|
Preference number: 6 (lower is better) Translates to: GPVRLRNPYLNM*PQAHGSDVQWL Trigger: TAACCATTGCACGTCACTACCGTGTGCCTGAGGGCACATGTTCAGATATGGATTTCTTAATCGCACTGGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000343571.3 ENST00000420999.2 |
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| CDS TCA 72 bp | CTGTCTTTTTCCATAAACTTCTTGAAGTTCCTCCGATaGGGTGTGGGCTTGAGGTCTATGCAGTTACGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: LSFSINFLKFLR*GVGLRSMQLRR Trigger: TCTCCGTAACTGCATAGACCTCAAGCCCACACCTCATCGGAGGAACTTCAAGAAGTTTATGGAAAAAGACAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000420999.2 |
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| CDS CCA 72 bp | TACAACCTCTCTCCGAATCTTCATGTAAGGATCTTCTaGACATTGCACTGGGGGATTCACTTTGACCCCTAT | + |
|
Preference number: 6 (lower is better) Translates to: YNLSPNLHVRIF*TLHWGIHFDPY Trigger: ATAGGGGTCAAAGTGAATCCCCCAGTGCAATGTCCAGAAGATCCTTACATGAAGATTCGGAGAGAGGTTGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000420999.2 |
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| CDS TCA 72 bp | ATAACATTGTTGCAAAAGCCCCAATGTTGGGATTTGTaGAACTTCTCCTTTCCCACGTTGCGGTTGAAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: ITLLQKPQCWDL*NFSFPTLRLKL Trigger: CAGCTTCAACCGCAACGTGGGAAAGGAGAAGTTTCACAAATCCCAACATTGGGGCTTTTGCAACAATGTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000420999.2 |
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| CDS TCA 72 bp | GTAGCCATCCGCTTGGTTCTTTATAAAGTCACCATATaGATTGAGAACTGCTCGATCTGTTATCTGGCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: VAIRLVLYKVTI*IENCSICYLAW Trigger: CCAGGCCAGATAACAGATCGAGCAGTTCTCAATTCATATGGTGACTTTATAAAGAACCAAGCGGATGGCTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000420999.2 |
||
| CDS TCA 72 bp | AAAGGTCCAGTAGTCAATGTATTTCGCAGGAATAGGTaGTGGCATACCAAGCCAAACATCTTCACATCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: KGPVVNVFRRNR*WHTKPNIFTSL Trigger: GAGAGATGTGAAGATGTTTGGCTTGGTATGCCATCACCTATTCCTGCGAAATACATTGACTACTGGACCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000343571.3 ENST00000420999.2 |
||
| CDS GCA 72 bp | CCTTTAGGATATATGCTACATTTAGGCTTTATCTTTTaGCCCAGAAGTGGTTCTCCACCTATTCCAGGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: PLGYMLHLGFIF*PRSGSPPIPGF Trigger: AAAGCCTGGAATAGGTGGAGAACCACTTCTGGGGCAAAAGATAAAGCCTAAATGTAGCATATATCCTAAAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000420999.2 |
||
| CDS CAA 72 bp | TCCTTTAGGATATATGCTACATTTAGGCTTTATCTTTaGCCCCAGAAGTGGTTCTCCACCTATTCCAGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: SFRIYATFRLYL*PQKWFSTYSRL Trigger: AAGCCTGGAATAGGTGGAGAACCACTTCTGGGGCAAAAGATAAAGCCTAAATGTAGCATATATCCTAAAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000420999.2 |
||
| CDS CAA 90 bp | ACTTCCATCTCCTTTAGGATATATGCTACATTTAGGCTTTATCTTTaGCCCCAGAAGTGGTTCTCCACCTATTCCAGGCTTTTCATCACT | + |
|
Preference number: 6 (lower is better) Translates to: TSISFRIYATFRLYL*PQKWFSTYSRLFIT Trigger: AGTGATGAAAAGCCTGGAATAGGTGGAGAACCACTTCTGGGGCAAAAGATAAAGCCTAAATGTAGCATATATCCTAAAGGAGATGGAAGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000420999.2 |
||
| CDS CAA 72 bp | ACATTCACCGTGACTCCAATGTACAGCTCCTCGGCCTaGATATATTCAGATAGTTCACTTTTAAAGACTTCT | + |
|
Preference number: 6 (lower is better) Translates to: TFTVTPMYSSSA*IYSDSSLLKTS Trigger: AGAAGTCTTTAAAAGTGAACTATCTGAATATATCAAGGCCGAGGAGCTGTACATTGGAGTCACGGTGAATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000420999.2 |
||
| CDS CAA 72 bp | TTTCCTTCTTCTTGCTTCAGCTTTTGTAGGGCAAGTTaGAGGTTACTGAAAGGATACTTATCTGTATTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: FPSSCFSFCRAS*RLLKGYLSVFC Trigger: GCAGAATACAGATAAGTATCCTTTCAGTAACCTCAAACTTGCCCTACAAAAGCTGAAGCAAGAAGAAGGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000420999.2 |
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