RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EFEMP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000172638

Ensembl transcript IDs: ENST00000307998.11, ENST00000524408.1, ENST00000525392.1, ENST00000526624.5, ENST00000526628.5, ENST00000526911.1, ENST00000527277.5, ENST00000527378.1, ENST00000527969.1, ENST00000528176.5, ENST00000528409.1, ENST00000529870.1, ENST00000530806.5, ENST00000530850.1, ENST00000531005.5, ENST00000531645.5, ENST00000531972.5, ENST00000532084.5, ENST00000532648.1, ENST00000533347.5

Found 373 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GTCCACATCCACACAGCTGTCCTGATCGTCGGGCTCATAGCCTGGTaGGCAGGGGTTGGGGTGTTGAGCGGGAGGCACTGGTGGCGGGGG +
Preference number: 1 (lower is better)
Translates to: VHIHTAVLIVGLIAW*AGVGVLSGRHWWRG
Trigger: CCCCCGCCACCAGTGCCTCCCGCTCAACACCCCAACCCCTGCCCACCAGGCTATGAGCCCGACGATCAGGACAGCTGTGTGGATGTGGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530850.1
ENST00000533347.5
3UTR TCA 90 bp CCTGGAGTCCGCCCTCCTCGTTACCTCCTCTCCTCTCGGGGTGACTaGAGCTCGTGGTGCAGAGCTCCCAGCTCCTGTCAATGGGGGCCC +
Preference number: 1 (lower is better)
Translates to: PGVRPPRYLLSSRGD*SSWCRAPSSCQWGP
Trigger: GGGCCCCCATTGACAGGAGCTGGGAGCTCTGCACCACGAGCTTCAGTCACCCCGAGAGGAGAGGAGGTAACGAGGAGGGCGGACTCCAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000307998.11
ENST00000524408.1
ENST00000527277.5
ENST00000531972.5
3UTR TCA 90 bp GGGGCCTGGAGTCCGCCCTCCTCGTTACCTCCTCTCCTCTCGGGGTaGCTGAAGCTCGTGGTGCAGAGCTCCCAGCTCCTGTCAATGGGG +
Preference number: 1 (lower is better)
Translates to: GAWSPPSSLPPLLSG*LKLVVQSSQLLSMG
Trigger: CCCCATTGACAGGAGCTGGGAGCTCTGCACCACGAGCTTCAGTCACCCCGAGAGGAGAGGAGGTAACGAGGAGGGCGGACTCCAGGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307998.11
ENST00000524408.1
ENST00000527277.5
ENST00000531972.5
3UTR CCA 90 bp CTCGTCCACATCCACACAGCTGTCCTGATCGTCGGGCTCATAGCCTaGTGGGCAGGGGTTGGGGTGTTGAGCGGGAGGCACTGGTGGCGG +
Preference number: 1 (lower is better)
Translates to: LVHIHTAVLIVGLIA*WAGVGVLSGRHWWR
Trigger: CCGCCACCAGTGCCTCCCGCTCAACACCCCAACCCCTGCCCACCAGGCTATGAGCCCGACGATCAGGACAGCTGTGTGGATGTGGACGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530850.1
ENST00000533347.5
3UTR TCA 90 bp GCTCATAGCCCTGGTGGCAGCGACACAGGAAGGTCCCATAGGAGTTaGAGCAGCGCTGCTCGCATGGGGCCCCCATGTCACACTCGTTCA +
Preference number: 1 (lower is better)
Translates to: AHSPGGSDTGRSHRS*SSAARMGPPCHTRS
Trigger: TGAACGAGTGTGACATGGGGGCCCCATGCGAGCAGCGCTGCTTCAACTCCTATGGGACCTTCCTGTGTCGCTGCCACCAGGGCTATGAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533347.5
3UTR GCA 90 bp TGTCCACACACTCGGGCCCGATCTTGCGGTAACCATCAGGGCAGGTaGACTGATAGGAGCCAGGCAAGTTATGGCAGTCCTGGCTGGGGC +
Preference number: 1 (lower is better)
Translates to: CPHTRARSCGNHQGR*TDRSQASYGSPGWG
Trigger: GCCCCAGCCAGGACTGCCATAACTTGCCTGGCTCCTATCAGTGCACCTGCCCTGATGGTTACCGCAAGATCGGGCCCGAGTGTGTGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530850.1
ENST00000533347.5
3UTR CCA 90 bp GCAGAGTTAGGAATGGAACCCAGGGCCTCCTGGCGCTGTCCAGAGTaGAGTTTCTTAGGACCCCTGCAAGCCAGCCAAGTCCAAATCTCT +
Preference number: 1 (lower is better)
Translates to: AELGMEPRASWRCPE*SFLGPLQASQVQIS
Trigger: AGAGATTTGGACTTGGCTGGCTTGCAGGGGTCCTAAGAAACTCCACTCTGGACAGCGCCAGGAGGCCCTGGGTTCCATTCCTAACTCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307998.11
ENST00000524408.1
ENST00000526911.1
ENST00000527277.5
ENST00000531972.5
3UTR-3UTR CCA 90 bp AGGCAAGTTATGGCAGTCCTGGCTGGGGCGACAGTCGTGCAGGGCCTGGGCACAAGCGGGAGGCACTGGTaGCGGGGGTCCCTCGCCGTG +
Preference number: 2 (lower is better)
Translates to: RQVMAVLAGATVVQGLGTSGRHW*RGSLAV
Trigger: CACGGCGAGGGACCCCCGCCACCAGTGCCTCCCGCT...TGTGCCCAGGCCCTGCACGACTGTCGCCCCAGCCAGGACTGCCATAACTTGCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000530850.1
ENST00000533347.5
3UTR-3UTR CCA 90 bp CAGGCAAGTTATGGCAGTCCTGGCTGGGGCGACAGTCGTGCAGGGCCTGGGCACTTGAGCGGGAGGCACTaGTGGCGGGGGTCCCTCGCC +
Preference number: 2 (lower is better)
Translates to: QASYGSPGWGDSRAGPGHLSGRH*WRGSLA
Trigger: GGCGAGGGACCCCCGCCACCAGTGCCTCCCGCTCAA...GTGCCCAGGCCCTGCACGACTGTCGCCCCAGCCAGGACTGCCATAACTTGCCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000530850.1
ENST00000533347.5
3UTR-3UTR CCA 90 bp ACAGCTGTCCTGATCGTCGGGCTCATAGCCTGGTGGGCAGGGGTTGGGGTGTTGAGCGGGAGGCACTGGTaGCGGGGGTCCCTCGCCGTG +
Preference number: 2 (lower is better)
Translates to: TAVLIVGLIAWWAGVGVLSGRHW*RGSLAV
Trigger: CACGGCGAGGGACCCCCGCCACCAGTGCCTCCCGCT...CAACACCCCAACCCCTGCCCACCAGGCTATGAGCCCGACGATCAGGACAGCTGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000530850.1
ENST00000533347.5
3UTR-3UTR CCA 90 bp GGTCCCATAGGAGTTGAAGCAGCGCTGCTCGCATGGGGCCCCCATGTCACACTCAAGCCCGGCTCGCACTaGCAGCGGAAGGAGCCAGGC +
Preference number: 2 (lower is better)
Translates to: GPIGVEAALLAWGPHVTLKPGSH*QRKEPG
Trigger: GCCTGGCTCCTTCCGCTGCCAGTGCGAGCCGGGCTT...GAGTGTGACATGGGGGCCCCATGCGAGCAGCGCTGCTTCAACTCCTATGGGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533347.5
3UTR-3UTR CCA 90 bp GATAGGAGCCAGGCAAGTTATGGCAGTCCTGGCTGGGGCGACAGTCGTGCAGGGCTGGTGGGCAGGGGTTaGGGTGTTGAGCGGGAGGCA +
Preference number: 2 (lower is better)
Translates to: DRSQASYGSPGWGDSRAGLVGRG*GVEREA
Trigger: TGCCTCCCGCTCAACACCCCAACCCCTGCCCACCAG...CCCTGCACGACTGTCGCCCCAGCCAGGACTGCCATAACTTGCCTGGCTCCTATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530850.1
ENST00000533347.5
3UTR-3UTR CCA 90 bp AGAAGCCATCCCGATGCAGCTCATAGCCCTGGTGGCAGCGACACAGGAAGGTCCCTGGTGGGCAGGGGTTaGGGTGTTGAGCGGGAGGCA +
Preference number: 2 (lower is better)
Translates to: RSHPDAAHSPGGSDTGRSLVGRG*GVEREA
Trigger: TGCCTCCCGCTCAACACCCCAACCCCTGCCCACCAG...GGACCTTCCTGTGTCGCTGCCACCAGGGCTATGAGCTGCATCGGGATGGCTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533347.5
3UTR-3UTR TCA 90 bp CTCCTGGCGCTGTCCAGAGTGGAGTTTCTTAGGACCCCTGCAAGCCAGCCAAGTAGGCTTCCTGCAGTGTaGCCCGCCCACCTCAGCCAC +
Preference number: 2 (lower is better)
Translates to: LLALSRVEFLRTPASQPSRLPAV*PAHLSH
Trigger: GTGGCTGAGGTGGGCGGGTCACACTGCAGGAAGCCT...ACTTGGCTGGCTTGCAGGGGTCCTAAGAAACTCCACTCTGGACAGCGCCAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307998.11
3UTR-3UTR TCA 90 bp GGCAAGTTATGGCAGTCCTGGCTGGGGCGACAGTCGTGCAGGGCCTGGGCACACAGCCCCCGTAGTGGTTaGTGCACTTCATTTCCCCCT +
Preference number: 2 (lower is better)
Translates to: GKLWQSWLGRQSCRAWAHSPRSG*CTSFPP
Trigger: AGGGGGAAATGAAGTGCATCAACCACTACGGGGGCT...GTGTGCCCAGGCCCTGCACGACTGTCGCCCCAGCCAGGACTGCCATAACTTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000530850.1
ENST00000533347.5
3UTR-3UTR TCA 90 bp CCCGATCTTGCGGTAACCATCAGGGCAGGTGCACTGATAGGAGCCAGGCAAGTTCAGGGGTTGGGGTGTTaGGCGGGAGGCACTGGTGGC +
Preference number: 2 (lower is better)
Translates to: PDLAVTIRAGALIGARQVQGLGC*AGGTGG
Trigger: GCCACCAGTGCCTCCCGCTCAACACCCCAACCCCTG...AACTTGCCTGGCTCCTATCAGTGCACCTGCCCTGATGGTTACCGCAAGATCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530850.1
ENST00000533347.5
3UTR-3UTR GCA 90 bp CCCGATCTTGCGGTAACCATCAGGGCAGGTGCACTGATAGGAGCCAGGCAAGTTCTGGGGCGACAGTCGTaGAGGGCCTGGGCACACTCG +
Preference number: 2 (lower is better)
Translates to: PDLAVTIRAGALIGARQVLGRQS*RAWAHS
Trigger: CGAGTGTGCCCAGGCCCTGCACGACTGTCGCCCCAG...AACTTGCCTGGCTCCTATCAGTGCACCTGCCCTGATGGTTACCGCAAGATCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530850.1
ENST00000533347.5
3UTR-3UTR TCA 90 bp TCTTGCGGTAACCATCAGGGCAGGTGCACTGATAGGAGCCAGGCAAGTTATGGCCAGGGGTTGGGGTGTTaGGCGGGAGGCACTGGTGGC +
Preference number: 2 (lower is better)
Translates to: SCGNHQGRCTDRSQASYGQGLGC*AGGTGG
Trigger: GCCACCAGTGCCTCCCGCTCAACACCCCAACCCCTG...GCCATAACTTGCCTGGCTCCTATCAGTGCACCTGCCCTGATGGTTACCGCAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530850.1
ENST00000533347.5
3UTR-3UTR CCA 90 bp GAGTTAGGAATGGAACCCAGGGCCTCCTGGCGCTGTCCAGAGTGGAGTTTCTTACTCTGGGCCGGGGCCTaGAGTCCGCCCTCCTCGTTA +
Preference number: 2 (lower is better)
Translates to: ELGMEPRASWRCPEWSFLLWAGA*SPPSSL
Trigger: TAACGAGGAGGGCGGACTCCAGGCCCCGGCCCAGAG...TAAGAAACTCCACTCTGGACAGCGCCAGGAGGCCCTGGGTTCCATTCCTAACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307998.11
ENST00000524408.1
ENST00000526911.1
ENST00000527277.5
ENST00000531972.5
3UTR-3UTR CCA 90 bp ACACTCGTTCACATCAACACAGGAGCGGTTGTTAGGCCCCAGCTGGAAGCCCGGTATGGCAGTCCTGGCTaGGGCGACAGTCGTGCAGGG +
Preference number: 2 (lower is better)
Translates to: TLVHINTGAVVRPQLEARYGSPG*GDSRAG
Trigger: CCCTGCACGACTGTCGCCCCAGCCAGGACTGCCATA...CCGGGCTTCCAGCTGGGGCCTAACAACCGCTCCTGTGTTGATGTGAACGAGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533347.5
3UTR-3UTR CCA 90 bp CACTCGTTCACATCAACACAGGAGCGGTTGTTAGGCCCCAGCTGGAAGCCCGGCGAGCCAGGCAAGTTATaGCAGTCCTGGCTGGGGCGA +
Preference number: 2 (lower is better)
Translates to: HSFTSTQERLLGPSWKPGEPGKL*QSWLGR
Trigger: TCGCCCCAGCCAGGACTGCCATAACTTGCCTGGCTC...GCCGGGCTTCCAGCTGGGGCCTAACAACCGCTCCTGTGTTGATGTGAACGAGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533347.5
3UTR-3UTR CCA 90 bp GGAATGGAACCCAGGGCCTCCTGGCGCTGTCCAGAGTGGAGTTTCTTAGGACCCGTCAATGGGGGCCCCTaGGCCTTTCTCATTCTGCCC +
Preference number: 2 (lower is better)
Translates to: GMEPRASWRCPEWSFLGPVNGGP*AFLILP
Trigger: GGGCAGAATGAGAAAGGCCCAGGGGCCCCCATTGAC...GGGTCCTAAGAAACTCCACTCTGGACAGCGCCAGGAGGCCCTGGGTTCCATTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531972.5
3UTR-3UTR CCA 90 bp TGTCCACACACTCGGGCCCGATCTTGCGGTAACCATCAGGGCAGGTGCACTGATGAGCCAGGCAAGTTATaGCAGTCCTGGCTGGGGCGA +
Preference number: 2 (lower is better)
Translates to: CPHTRARSCGNHQGRCTDEPGKL*QSWLGR
Trigger: TCGCCCCAGCCAGGACTGCCATAACTTGCCTGGCTC...ATCAGTGCACCTGCCCTGATGGTTACCGCAAGATCGGGCCCGAGTGTGTGGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530850.1
ENST00000533347.5
3UTR-3UTR CCA 90 bp AGAGTTAGGAATGGAACCCAGGGCCTCCTGGCGCTGTCCAGAGTGGAGTTTCTTGTCAATGGGGGCCCCTaGGCCTCAGCCACCAGGACT +
Preference number: 2 (lower is better)
Translates to: RVRNGTQGLLALSRVEFLVNGGP*ASATRT
Trigger: AGTCCTGGTGGCTGAGGCCCAGGGGCCCCCATTGAC...AAGAAACTCCACTCTGGACAGCGCCAGGAGGCCCTGGGTTCCATTCCTAACTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000527277.5
3UTR-3UTR TCA 90 bp GAGTTAGGAATGGAACCCAGGGCCTCCTGGCGCTGTCCAGAGTGGAGTTTCTTACCTCTCCTCTCGGGGTaGCTGAAGCTCGTGGTGCAG +
Preference number: 2 (lower is better)
Translates to: ELGMEPRASWRCPEWSFLPLLSG*LKLVVQ
Trigger: CTGCACCACGAGCTTCAGTCACCCCGAGAGGAGAGG...TAAGAAACTCCACTCTGGACAGCGCCAGGAGGCCCTGGGTTCCATTCCTAACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307998.11
ENST00000524408.1
ENST00000526911.1
ENST00000527277.5
ENST00000531972.5
3UTR-3UTR CCA 90 bp CCGATGCAGCTCATAGCCCTGGTGGCAGCGACACAGGAAGGTCCCATAGGAGTTAAGTTATGGCAGTCCTaGCTGGGGCGACAGTCGTGC +
Preference number: 2 (lower is better)
Translates to: PMQLIALVAATQEGPIGVKLWQS*LGRQSC
Trigger: GCACGACTGTCGCCCCAGCCAGGACTGCCATAACTT...AACTCCTATGGGACCTTCCTGTGTCGCTGCCACCAGGGCTATGAGCTGCATCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533347.5
3UTR-3UTR TCA 90 bp TCCAGAGTGGAGTTTCTTAGGACCCCTGCAAGCCAGCCAAGTCCAAATCTCTGGCCTCTCCTCTCGGGGTaGCTGAAGCTCGTGGTGCAG +
Preference number: 2 (lower is better)
Translates to: SRVEFLRTPASQPSPNLWPLLSG*LKLVVQ
Trigger: CTGCACCACGAGCTTCAGTCACCCCGAGAGGAGAGG...CCAGAGATTTGGACTTGGCTGGCTTGCAGGGGTCCTAAGAAACTCCACTCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307998.11
ENST00000524408.1
ENST00000526911.1
ENST00000527277.5
ENST00000531972.5
3UTR-3UTR GCA 90 bp GCTCGCATGGGGCCCCCATGTCACACTCGTTCACATCAACACAGGAGCGGTTGTAACCATCAGGGCAGGTaGACTGATAGGAGCCAGGCA +
Preference number: 2 (lower is better)
Translates to: ARMGPPCHTRSHQHRSGCNHQGR*TDRSQA
Trigger: TGCCTGGCTCCTATCAGTGCACCTGCCCTGATGGTT...ACAACCGCTCCTGTGTTGATGTGAACGAGTGTGACATGGGGGCCCCATGCGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533347.5
3UTR-3UTR GCA 90 bp GCAGAGTTAGGAATGGAACCCAGGGCCTCCTGGCGCTGTCCAGAGTGGAGTTTCGGGCCTTTCTCATTCTaGCCCTCACAACAGGCTCCT +
Preference number: 2 (lower is better)
Translates to: AELGMEPRASWRCPEWSFGPFSF*PSQQAP
Trigger: AGGAGCCTGTTGTGAGGGGCAGAATGAGAAAGGCCC...GAAACTCCACTCTGGACAGCGCCAGGAGGCCCTGGGTTCCATTCCTAACTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531972.5
3UTR-3UTR CCA 90 bp AGGGCTTATCCAAATGTACAGTTTGAGGCAGAGTTAGGAATGGAACCCAGGGCCCCCAGCTCCTGTCAATaGGGGCCCCTGGGCAACAGG +
Preference number: 2 (lower is better)
Translates to: RAYPNVQFEAELGMEPRAPSSCQ*GPLGNR
Trigger: CCTGTTGCCCAGGGGCCCCCATTGACAGGAGCTGGG...GGCCCTGGGTTCCATTCCTAACTCTGCCTCAAACTGTACATTTGGATAAGCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000524408.1
3UTR-3UTR GCA 90 bp TCCTGGCGCTGTCCAGAGTGGAGTTTCTTAGGACCCCTGCAAGCCAGCCAAGTCTTGCCTTTCTCATTCTaGCCCTCACAACAGGCTCCT +
Preference number: 2 (lower is better)
Translates to: SWRCPEWSFLGPLQASQVLPFSF*PSQQAP
Trigger: AGGAGCCTGTTGTGAGGGGCAGAATGAGAAAGGCAA...GACTTGGCTGGCTTGCAGGGGTCCTAAGAAACTCCACTCTGGACAGCGCCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307998.11
ENST00000527277.5
3UTR-3UTR TCA 90 bp ACTAGGGCTTATCCAAATGTACAGTTTGAGGCAGAGTTAGGAATGGAACCCAGGTCCTCTCGGGGTGACTaGAGCTCGTGGTGCAGAGCT +
Preference number: 2 (lower is better)
Translates to: TRAYPNVQFEAELGMEPRSSRGD*SSWCRA
Trigger: AGCTCTGCACCACGAGCTTCAGTCACCCCGAGAGGA...CCTGGGTTCCATTCCTAACTCTGCCTCAAACTGTACATTTGGATAAGCCCTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307998.11
ENST00000524408.1
ENST00000526911.1
ENST00000527277.5
ENST00000531972.5
3UTR CCA 72 bp GCAAGCCAGCCAAGTCCAAATCTCTGGGCCGGGGCCTaGAGTCCGCCCTCCTCGTTACCTCCTCTCCTCTCG +
Preference number: 3 (lower is better)
Translates to: ASQPSPNLWAGA*SPPSSLPPLLS
Trigger: CGAGAGGAGAGGAGGTAACGAGGAGGGCGGACTCCAGGCCCCGGCCCAGAGATTTGGACTTGGCTGGCTTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307998.11
ENST00000524408.1
ENST00000526911.1
ENST00000527277.5
ENST00000531972.5
3UTR CCA 72 bp CACACAGCTGTCCTGATCGTCGGGCTCATAGCCTGGTaGGCAGGGGTTGGGGTGTTGAGCGGGAGGCACTGG +
Preference number: 3 (lower is better)
Translates to: HTAVLIVGLIAW*AGVGVLSGRHW
Trigger: CCAGTGCCTCCCGCTCAACACCCCAACCCCTGCCCACCAGGCTATGAGCCCGACGATCAGGACAGCTGTGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530850.1
ENST00000533347.5
3UTR-3UTR CAA 90 bp GCACTGATAGGAGCCAGGCAAGTTATGGCAGTCCTGGCTGGGGCGACAGTCGTGGCAGGGGTTGGGGTGTaGAGCGGGAGGCACTGGTGG +
Preference number: 3 (lower is better)
Translates to: ALIGARQVMAVLAGATVVAGVGV*SGRHWW
Trigger: CCACCAGTGCCTCCCGCTCAACACCCCAACCCCTGC...CACGACTGTCGCCCCAGCCAGGACTGCCATAACTTGCCTGGCTCCTATCAGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000530850.1
ENST00000533347.5
3UTR-3UTR CAA 90 bp TGTCCACACACTCGGGCCCGATCTTGCGGTAACCATCAGGGCAGGTGCACTGATGCAGGGGTTGGGGTGTaGAGCGGGAGGCACTGGTGG +
Preference number: 3 (lower is better)
Translates to: CPHTRARSCGNHQGRCTDAGVGV*SGRHWW
Trigger: CCACCAGTGCCTCCCGCTCAACACCCCAACCCCTGC...ATCAGTGCACCTGCCCTGATGGTTACCGCAAGATCGGGCCCGAGTGTGTGGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530850.1
ENST00000533347.5
3UTR CCA 72 bp ACTGATAGGAGCCAGGCAAGTTATGGCAGTCCTGGCTaGGGCGACAGTCGTGCAGGGCCTGGGCACACTCGT +
Preference number: 3 (lower is better)
Translates to: TDRSQASYGSPG*GDSRAGPGHTR
Trigger: ACGAGTGTGCCCAGGCCCTGCACGACTGTCGCCCCAGCCAGGACTGCCATAACTTGCCTGGCTCCTATCAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530850.1
ENST00000533347.5
3UTR GCA 72 bp GGCACTCGTCTATGTCCACACACTCGGGCCCGATCTTaGGGTAACCATCAGGGCAGGTGCACTGATAGGAGC +
Preference number: 3 (lower is better)
Translates to: GTRLCPHTRARS*GNHQGRCTDRS
Trigger: GCTCCTATCAGTGCACCTGCCCTGATGGTTACCGCAAGATCGGGCCCGAGTGTGTGGACATAGACGAGTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530850.1
ENST00000533347.5
3UTR GCA 72 bp ACTCGGGCCCGATCTTGCGGTAACCATCAGGGCAGGTaGACTGATAGGAGCCAGGCAAGTTATGGCAGTCCT +
Preference number: 3 (lower is better)
Translates to: TRARSCGNHQGR*TDRSQASYGSP
Trigger: AGGACTGCCATAACTTGCCTGGCTCCTATCAGTGCACCTGCCCTGATGGTTACCGCAAGATCGGGCCCGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530850.1
ENST00000533347.5
CDS-3UTR CCA 90 bp GGGGGTCCCTCGCCGTGTAGGTCGTTGATGACGGCAGCGGAGCGGGGCAGGCACGCCAGTCTCCTGGGCTaGCCCCCGGCAGTGCTGGCT +
Preference number: 4 (lower is better)
Translates to: GGPSPCRSLMTAAERGRHASLLG*PPAVLA
Trigger: AGCCAGCACTGCCGGGGGCCAGCCCAGGAGACTGGC...GTGCCTGCCCCGCTCCGCTGCCGTCATCAACGACCTACACGGCGAGGGACCCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000533347.5
CDS-3UTR CCA 90 bp ACCCCTGCAAGCCAGCCAAGTCCAAATCTCTGGGCCGGGGCCTGGAGTCCGCCCGGAGCATCCTGGGGTTaGGCCCGCGACACCCCCGCG +
Preference number: 4 (lower is better)
Translates to: TPASQPSPNLWAGAWSPPGASWG*ARDTPA
Trigger: CGCGGGGGTGTCGCGGGCCCAACCCCAGGATGCTCC...GGGCGGACTCCAGGCCCCGGCCCAGAGATTTGGACTTGGCTGGCTTGCAGGGGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000307998.11
ENST00000531972.5
CDS-3UTR CCA 90 bp CCCTGCAAGCCAGCCAAGTCCAAATCTCTGGGCCGGGGCCTGGAGTCCGCCCTCGGAGCATCCTGGGGTTaGGCCCGCGACACCCCCGCG +
Preference number: 4 (lower is better)
Translates to: PCKPAKSKSLGRGLESALGASWG*ARDTPA
Trigger: CGCGGGGGTGTCGCGGGCCCAACCCCAGGATGCTCC...GAGGGCGGACTCCAGGCCCCGGCCCAGAGATTTGGACTTGGCTGGCTTGCAGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307998.11
ENST00000531972.5
CDS-3UTR CCA 90 bp CCCTGCAAGCCAGCCAAGTCCAAATCTCTGGGCCGGGGCCTGGAGTCCGCCCTCGACGGCACAGCTCCCTaGACGCGCGGCCCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: PCKPAKSKSLGRGLESALDGTAP*TRGPRK
Trigger: CTTCCTGGGGCCGCGCGTCCAGGGAGCTGTGCCGTC...GAGGGCGGACTCCAGGCCCCGGCCCAGAGATTTGGACTTGGCTGGCTTGCAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307998.11
ENST00000531972.5
CDS-3UTR CCA 90 bp GCCAAGTCCAAATCTCTGGGCCGGGGCCTGGAGTCCGCCCTCCTCGTTACCTCCAGCGGGAGGCACTGGTaGCGGGGGTCCCTCGCCGTG +
Preference number: 4 (lower is better)
Translates to: AKSKSLGRGLESALLVTSSGRHW*RGSLAV
Trigger: CACGGCGAGGGACCCCCGCCACCAGTGCCTCCCGCT...GGAGGTAACGAGGAGGGCGGACTCCAGGCCCCGGCCCAGAGATTTGGACTTGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307998.11
ENST00000531972.5
CDS-3UTR CCA 90 bp CCCTGCAAGCCAGCCAAGTCCAAATCTCTGGGCCGGGGCCTGGAGTCCGCCCTCTTGAGCGGGAGGCACTaGTGGCGGGGGTCCCTCGCC +
Preference number: 4 (lower is better)
Translates to: PCKPAKSKSLGRGLESALLSGRH*WRGSLA
Trigger: GGCGAGGGACCCCCGCCACCAGTGCCTCCCGCTCAA...GAGGGCGGACTCCAGGCCCCGGCCCAGAGATTTGGACTTGGCTGGCTTGCAGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307998.11
ENST00000531972.5
CDS-3UTR TCA 90 bp CCTGCAAGCCAGCCAAGTCCAAATCTCTGGGCCGGGGCCTGGAGTCCGCCCTCCCAGGGGTTGGGGTGTTaGGCGGGAGGCACTGGTGGC +
Preference number: 4 (lower is better)
Translates to: PASQPSPNLWAGAWSPPSQGLGC*AGGTGG
Trigger: GCCACCAGTGCCTCCCGCTCAACACCCCAACCCCTG...GGAGGGCGGACTCCAGGCCCCGGCCCAGAGATTTGGACTTGGCTGGCTTGCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307998.11
ENST00000531972.5
CDS-3UTR GCA 90 bp AGTCCAAATCTCTGGGCCGGGGCCTGGAGTCCGCCCTCCTCGTTACCTCCTCTCGGCTCGGGCAATGCCTaGGGGCAGACGGACGGGCGG +
Preference number: 4 (lower is better)
Translates to: SPNLWAGAWSPPSSLPPLGSGNA*GQTDGR
Trigger: CCGCCCGTCCGTCTGCCCGCAGGCATTGCCCGAGCC...GAGAGGAGGTAACGAGGAGGGCGGACTCCAGGCCCCGGCCCAGAGATTTGGACT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307998.11
ENST00000531972.5
CDS-3UTR CCA 90 bp GCAAGTTATGGCAGTCCTGGCTGGGGCGACAGTCGTGCAGGGCCTGGGCACACTAGCGGGAGGCACTGGTaGCGGGGGTCCCTCGCCGTG +
Preference number: 4 (lower is better)
Translates to: ASYGSPGWGDSRAGPGHTSGRHW*RGSLAV
Trigger: CACGGCGAGGGACCCCCGCCACCAGTGCCTCCCGCT...AGTGTGCCCAGGCCCTGCACGACTGTCGCCCCAGCCAGGACTGCCATAACTTGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000530850.1
ENST00000533347.5
CDS-3UTR CCA 90 bp GGTGGCGGGGGTCCCTCGCCGTGTAGGTCGTTGATGACGGCAGCGGAGCGGGGCGAGCCAGGCAAGTTATaGCAGTCCTGGCTGGGGCGA +
Preference number: 4 (lower is better)
Translates to: GGGGPSPCRSLMTAAERGEPGKL*QSWLGR
Trigger: TCGCCCCAGCCAGGACTGCCATAACTTGCCTGGCTC...GCCCCGCTCCGCTGCCGTCATCAACGACCTACACGGCGAGGGACCCCCGCCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000530850.1
ENST00000533347.5
CDS-3UTR CCA 90 bp GCAAGCCAGCCAAGTCCAAATCTCTGGGCCGGGGCCTGGAGTCCGCCCTCCTCGAAGCCCGGCTCGCACTaGCAGCGGAAGGAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: ASQPSPNLWAGAWSPPSSKPGSH*QRKEPG
Trigger: GCCTGGCTCCTTCCGCTGCCAGTGCGAGCCGGGCTT...CGAGGAGGGCGGACTCCAGGCCCCGGCCCAGAGATTTGGACTTGGCTGGCTTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307998.11
ENST00000531972.5
CDS-3UTR TCA 90 bp CCCTGCAAGCCAGCCAAGTCCAAATCTCTGGGCCGGGGCCTGGAGTCCGCCCTCCACCCTGCCCCAGCCTaGGGCTTCCTGCAGTGTGAC +
Preference number: 4 (lower is better)
Translates to: PCKPAKSKSLGRGLESALHPAPA*GFLQCD
Trigger: GTCACACTGCAGGAAGCCTCAGGCTGGGGCAGGGTG...GAGGGCGGACTCCAGGCCCCGGCCCAGAGATTTGGACTTGGCTGGCTTGCAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000307998.11
CDS-3UTR GCA 90 bp GAGTCCGCCCTCCTCGTTACCTCCTCTCCTCTCGGGGTGACTGAAGCTCGTGGTGGCTCGGGCAATGCCTaGGGGCAGACGGACGGGCGG +
Preference number: 4 (lower is better)
Translates to: ESALLVTSSPLGVTEARGGSGNA*GQTDGR
Trigger: CCGCCCGTCCGTCTGCCCGCAGGCATTGCCCGAGCC...ACCACGAGCTTCAGTCACCCCGAGAGGAGAGGAGGTAACGAGGAGGGCGGACTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307998.11
ENST00000531972.5
CDS-3UTR GCA 90 bp GCCAGCCAAGTCCAAATCTCTGGGCCGGGGCCTGGAGTCCGCCCTCCTCGTTACCTGGGGCGACAGTCGTaGAGGGCCTGGGCACACTCG +
Preference number: 4 (lower is better)
Translates to: ASQVQISGPGPGVRPPRYLGRQS*RAWAHS
Trigger: CGAGTGTGCCCAGGCCCTGCACGACTGTCGCCCCAG...GTAACGAGGAGGGCGGACTCCAGGCCCCGGCCCAGAGATTTGGACTTGGCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307998.11
ENST00000531972.5
CDS-3UTR GCA 90 bp GCAAGTTATGGCAGTCCTGGCTGGGGCGACAGTCGTGCAGGGCCTGGGCACACTGCTGGCCCCCGGCAGTaGTGGCTGTCTGGGTCCCAC +
Preference number: 4 (lower is better)
Translates to: ASYGSPGWGDSRAGPGHTAGPRQ*WLSGSH
Trigger: GTGGGACCCAGACAGCCAGCACTGCCGGGGGCCAGC...AGTGTGCCCAGGCCCTGCACGACTGTCGCCCCAGCCAGGACTGCCATAACTTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533347.5
CDS-3UTR CCA 90 bp CAAGTTATGGCAGTCCTGGCTGGGGCGACAGTCGTGCAGGGCCTGGGCACACTCTTGAGCGGGAGGCACTaGTGGCGGGGGTCCCTCGCC +
Preference number: 4 (lower is better)
Translates to: QVMAVLAGATVVQGLGTLLSGRH*WRGSLA
Trigger: GGCGAGGGACCCCCGCCACCAGTGCCTCCCGCTCAA...GAGTGTGCCCAGGCCCTGCACGACTGTCGCCCCAGCCAGGACTGCCATAACTTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000530850.1
ENST00000533347.5
CDS-3UTR CCA 90 bp GCCAAGTCCAAATCTCTGGGCCGGGGCCTGGAGTCCGCCCTCCTCGTTACCTCCCTCTGGGCCGGGGCCTaGAGTCCGCCCTCCTCGTTA +
Preference number: 4 (lower is better)
Translates to: AKSKSLGRGLESALLVTSLWAGA*SPPSSL
Trigger: TAACGAGGAGGGCGGACTCCAGGCCCCGGCCCAGAG...GGAGGTAACGAGGAGGGCGGACTCCAGGCCCCGGCCCAGAGATTTGGACTTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307998.11
ENST00000524408.1
ENST00000526911.1
ENST00000527277.5
ENST00000531972.5
CDS-3UTR CCA 90 bp AGTCCAAATCTCTGGGCCGGGGCCTGGAGTCCGCCCTCCTCGTTACCTCCTCTCCCCAGCTCCTGTCAATaGGGGCCCCTGGGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: SPNLWAGAWSPPSSLPPLPSSCQ*GPLGSR
Trigger: CCGGGAGCCCAGGGGCCCCCATTGACAGGAGCTGGG...GAGAGGAGGTAACGAGGAGGGCGGACTCCAGGCCCCGGCCCAGAGATTTGGACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000526911.1
CDS-3UTR TCA 90 bp ACCCCTGCAAGCCAGCCAAGTCCAAATCTCTGGGCCGGGGCCTGGAGTCCGCCCCCTCTCCTCTCGGGGTaGCTGAAGCTCGTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: TPASQPSPNLWAGAWSPPPLLSG*LKLVVQ
Trigger: CTGCACCACGAGCTTCAGTCACCCCGAGAGGAGAGG...GGGCGGACTCCAGGCCCCGGCCCAGAGATTTGGACTTGGCTGGCTTGCAGGGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000307998.11
ENST00000524408.1
ENST00000526911.1
ENST00000527277.5
ENST00000531972.5
CDS-3UTR GCA 90 bp AGAAGCCATCCCGATGCAGCTCATAGCCCTGGTGGCAGCGACACAGGAAGGTCCGGCTCGGGCAATGCCTaGGGGCAGACGGACGGGCGG +
Preference number: 4 (lower is better)
Translates to: RSHPDAAHSPGGSDTGRSGSGNA*GQTDGR
Trigger: CCGCCCGTCCGTCTGCCCGCAGGCATTGCCCGAGCC...GGACCTTCCTGTGTCGCTGCCACCAGGGCTATGAGCTGCATCGGGATGGCTTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533347.5
CDS-3UTR GCA 90 bp ACCTCCTCTCCTCTCGGGGTGACTGAAGCTCGTGGTGCAGAGCTCCCAGCTCCTGGCTGGCTCGGGCAATaGCTGCGGGCAGACGGACGG +
Preference number: 4 (lower is better)
Translates to: TSSPLGVTEARGAELPAPGWLGQ*LRADGR
Trigger: CCGTCCGTCTGCCCGCAGGCATTGCCCGAGCCAGCC...AGGAGCTGGGAGCTCTGCACCACGAGCTTCAGTCACCCCGAGAGGAGAGGAGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307998.11
ENST00000531972.5
CDS-3UTR GCA 90 bp TGCAAGCCAGCCAAGTCCAAATCTCTGGGCCGGGGCCTGGAGTCCGCCCTCCTCCCCCAAGTGCCACCCTaGCCCAGCCTGAGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: CKPAKSKSLGRGLESALLPQVPP*PSLRLP
Trigger: AGGAAGCCTCAGGCTGGGGCAGGGTGGCACTTGGGG...GAGGAGGGCGGACTCCAGGCCCCGGCCCAGAGATTTGGACTTGGCTGGCTTGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307998.11
CDS-3UTR CCA 90 bp GGCCTCCTGGCGCTGTCCAGAGTGGAGTTTCTTAGGACCCCTGCAAGCCAGCCACTCTGGCGGCTCGGCTaGCTCGGGCAATGCCTGCGG +
Preference number: 4 (lower is better)
Translates to: GLLALSRVEFLRTPASQPLWRLG*LGQCLR
Trigger: CCGCAGGCATTGCCCGAGCCAGCCGAGCCGCCAGAG...TGGCTGGCTTGCAGGGGTCCTAAGAAACTCCACTCTGGACAGCGCCAGGAGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307998.11
ENST00000531972.5
CDS-3UTR CCA 90 bp AGGGCAGGTGCACTGATAGGAGCCAGGCAAGTTATGGCAGTCCTGGCTGGGGCGTTGAGCGGGAGGCACTaGTGGCGGGGGTCCCTCGCC +
Preference number: 4 (lower is better)
Translates to: RAGALIGARQVMAVLAGALSGRH*WRGSLA
Trigger: GGCGAGGGACCCCCGCCACCAGTGCCTCCCGCTCAA...CGCCCCAGCCAGGACTGCCATAACTTGCCTGGCTCCTATCAGTGCACCTGCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000530850.1
ENST00000533347.5
CDS-3UTR CCA 90 bp CCCCTGCAAGCCAGCCAAGTCCAAATCTCTGGGCCGGGGCCTGGAGTCCGCCCTTGGGCCTCGGAGCACTaGTGCGCACCAGACTCACAC +
Preference number: 4 (lower is better)
Translates to: PLQASQVQISGPGPGVRPWASEH*CAPDSH
Trigger: GTGTGAGTCTGGTGCGCACCAGTGCTCCGAGGCCCA...AGGGCGGACTCCAGGCCCCGGCCCAGAGATTTGGACTTGGCTGGCTTGCAGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307998.11
ENST00000531972.5
CDS-3UTR CCA 90 bp GGCAGGTGCACTGATAGGAGCCAGGCAAGTTATGGCAGTCCTGGCTGGGGCGACGCACAGCCAGTCTCCTaGGCTGGCCCCCGGCAGTGC +
Preference number: 4 (lower is better)
Translates to: GRCTDRSQASYGSPGWGDAQPVS*AGPRQC
Trigger: GCACTGCCGGGGGCCAGCCCAGGAGACTGGCTGTGC...GTCGCCCCAGCCAGGACTGCCATAACTTGCCTGGCTCCTATCAGTGCACCTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533347.5
CDS-3UTR TCA 90 bp GCGCTGCTCGCATGGGGCCCCCATGTCACACTCGTTCACATCAACACAGGAGCGCAGGGGTTGGGGTGTTaGGCGGGAGGCACTGGTGGC +
Preference number: 4 (lower is better)
Translates to: ALLAWGPHVTLVHINTGAQGLGC*AGGTGG
Trigger: GCCACCAGTGCCTCCCGCTCAACACCCCAACCCCTG...CGCTCCTGTGTTGATGTGAACGAGTGTGACATGGGGGCCCCATGCGAGCAGCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000533347.5
CDS-3UTR TCA 90 bp GCCAGCCAAGTCCAAATCTCTGGGCCGGGGCCTGGAGTCCGCCCTCCTCGTTACCGCTCCGCTCCGAGGTaGTGGTCATGTAGCGGTGCA +
Preference number: 4 (lower is better)
Translates to: ASQVQISGPGPGVRPPRYRSAPR*WSCSGA
Trigger: TGCACCGCTACATGACCATCACCTCGGAGCGGAGCG...GTAACGAGGAGGGCGGACTCCAGGCCCCGGCCCAGAGATTTGGACTTGGCTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307998.11
ENST00000526911.1
ENST00000531972.5
CDS-3UTR GCA 90 bp GAGGCAGAGTTAGGAATGGAACCCAGGGCCTCCTGGCGCTGTCCAGAGTGGAGTGGCTGGCTCGGGCAATaGCTGCGGGCAGACGGACGG +
Preference number: 4 (lower is better)
Translates to: EAELGMEPRASWRCPEWSGWLGQ*LRADGR
Trigger: CCGTCCGTCTGCCCGCAGGCATTGCCCGAGCCAGCC...ACTCCACTCTGGACAGCGCCAGGAGGCCCTGGGTTCCATTCCTAACTCTGCCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307998.11
ENST00000531972.5
CDS-3UTR GCA 90 bp CTCGGGCCCGATCTTGCGGTAACCATCAGGGCAGGTGCACTGATAGGAGCCAGGCTGGGGCGACAGTCGTaGAGGGCCTGGGCACACTCG +
Preference number: 4 (lower is better)
Translates to: LGPDLAVTIRAGALIGARLGRQS*RAWAHS
Trigger: CGAGTGTGCCCAGGCCCTGCACGACTGTCGCCCCAG...CCTGGCTCCTATCAGTGCACCTGCCCTGATGGTTACCGCAAGATCGGGCCCGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530850.1
ENST00000533347.5
CDS-3UTR GCA 90 bp CCCTGCAAGCCAGCCAAGTCCAAATCTCTGGGCCGGGGCCTGGAGTCCGCCCTCACTCGGGCCCGATCTTaGGGTAACCATCAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: PCKPAKSKSLGRGLESALTRARS*GNHQGR
Trigger: CCTGCCCTGATGGTTACCGCAAGATCGGGCCCGAGT...GAGGGCGGACTCCAGGCCCCGGCCCAGAGATTTGGACTTGGCTGGCTTGCAGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307998.11
ENST00000531972.5
CDS-3UTR CCA 90 bp CGTCTATGTCCACACACTCGGGCCCGATCTTGCGGTAACCATCAGGGCAGGTGCGACGGCACAGCTCCCTaGACGCGCGGCCCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: RLCPHTRARSCGNHQGRCDGTAP*TRGPRK
Trigger: CTTCCTGGGGCCGCGCGTCCAGGGAGCTGTGCCGTC...GCACCTGCCCTGATGGTTACCGCAAGATCGGGCCCGAGTGTGTGGACATAGACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533347.5
CDS-3UTR CCA 90 bp GTGCAGAGCTCCCAGCTCCTGTCAATGGGGGCCCCTGGGCCTGAACATATAGAGCTCTGGCGGCTCGGCTaGCTCGGGCAATGCCTGCGG +
Preference number: 4 (lower is better)
Translates to: VQSSQLLSMGAPGPEHIELWRLG*LGQCLR
Trigger: CCGCAGGCATTGCCCGAGCCAGCCGAGCCGCCAGAG...CTCTATATGTTCAGGCCCAGGGGCCCCCATTGACAGGAGCTGGGAGCTCTGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307998.11
CDS-3UTR CCA 90 bp AGCGGAGCGGGGCAGGCACAAGTAGCCCCCGTAGTGGTTGATGCACTTCATTTCGGAGCATCCTGGGGTTaGGCCCGCGACACCCCCGCG +
Preference number: 4 (lower is better)
Translates to: SGAGQAQVAPVVVDALHFGASWG*ARDTPA
Trigger: CGCGGGGGTGTCGCGGGCCCAACCCCAGGATGCTCC...GAAATGAAGTGCATCAACCACTACGGGGGCTACTTGTGCCTGCCCCGCTCCGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000530850.1
ENST00000533347.5
CDS-3UTR CCA 90 bp CCGATGCAGCTCATAGCCCTGGTGGCAGCGACACAGGAAGGTCCCATAGGAGTTGGAGCATCCTGGGGTTaGGCCCGCGACACCCCCGCG +
Preference number: 4 (lower is better)
Translates to: PMQLIALVAATQEGPIGVGASWG*ARDTPA
Trigger: CGCGGGGGTGTCGCGGGCCCAACCCCAGGATGCTCC...AACTCCTATGGGACCTTCCTGTGTCGCTGCCACCAGGGCTATGAGCTGCATCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533347.5
CDS-3UTR CCA 90 bp GGTAGCGGCACTCGTCTATGTCCACACACTCGGGCCCGATCTTGCGGTAACCATAGCGGGAGGCACTGGTaGCGGGGGTCCCTCGCCGTG +
Preference number: 4 (lower is better)
Translates to: GSGTRLCPHTRARSCGNHSGRHW*RGSLAV
Trigger: CACGGCGAGGGACCCCCGCCACCAGTGCCTCCCGCT...ATGGTTACCGCAAGATCGGGCCCGAGTGTGTGGACATAGACGAGTGCCGCTACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000530850.1
ENST00000533347.5
CDS-3UTR CCA 90 bp CTGCAAGCCAGCCAAGTCCAAATCTCTGGGCCGGGGCCTGGAGTCCGCCCTCCTTATGGCAGTCCTGGCTaGGGCGACAGTCGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: LQASQVQISGPGPGVRPPYGSPG*GDSRAG
Trigger: CCCTGCACGACTGTCGCCCCAGCCAGGACTGCCATA...AGGAGGGCGGACTCCAGGCCCCGGCCCAGAGATTTGGACTTGGCTGGCTTGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307998.11
ENST00000531972.5
CDS-3UTR CCA 90 bp AGCCAAGTCCAAATCTCTGGGCCGGGGCCTGGAGTCCGCCCTCCTCGTTACCTCGCTCCACGCAGCGGTTaGTGTCCACGCAGCGGTAGC +
Preference number: 4 (lower is better)
Translates to: SQVQISGPGPGVRPPRYLAPRSG*CPRSGS
Trigger: GCTACCGCTGCGTGGACACCAACCGCTGCGTGGAGC...GAGGTAACGAGGAGGGCGGACTCCAGGCCCCGGCCCAGAGATTTGGACTTGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307998.11
ENST00000531972.5
CDS-3UTR CCA 90 bp ACCTCCTCTCCTCTCGGGGTGACTGAAGCTCGTGGTGCAGAGCTCCCAGCTCCTCTCTGGGCCGGGGCCTaGAGTCCGCCCTCCTCGTTA +
Preference number: 4 (lower is better)
Translates to: TSSPLGVTEARGAELPAPLWAGA*SPPSSL
Trigger: TAACGAGGAGGGCGGACTCCAGGCCCCGGCCCAGAG...AGGAGCTGGGAGCTCTGCACCACGAGCTTCAGTCACCCCGAGAGGAGAGGAGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307998.11
ENST00000524408.1
ENST00000526911.1
ENST00000527277.5
ENST00000531972.5
CDS-3UTR CCA 90 bp GGAACCCAGGGCCTCCTGGCGCTGTCCAGAGTGGAGTTTCTTAGGACCCCTGCACTCTGGGCCGGGGCCTaGAGTCCGCCCTCCTCGTTA +
Preference number: 4 (lower is better)
Translates to: GTQGLLALSRVEFLRTPALWAGA*SPPSSL
Trigger: TAACGAGGAGGGCGGACTCCAGGCCCCGGCCCAGAG...TGCAGGGGTCCTAAGAAACTCCACTCTGGACAGCGCCAGGAGGCCCTGGGTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307998.11
ENST00000524408.1
ENST00000526911.1
ENST00000527277.5
ENST00000531972.5
CDS-3UTR TCA 90 bp GCACTGATAGGAGCCAGGCAAGTTATGGCAGTCCTGGCTGGGGCGACAGTCGTGCAGGGGTTGGGGTGTTaGGCGGGAGGCACTGGTGGC +
Preference number: 4 (lower is better)
Translates to: ALIGARQVMAVLAGATVVQGLGC*AGGTGG
Trigger: GCCACCAGTGCCTCCCGCTCAACACCCCAACCCCTG...CACGACTGTCGCCCCAGCCAGGACTGCCATAACTTGCCTGGCTCCTATCAGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000530850.1
ENST00000533347.5
CDS-3UTR TCA 90 bp GCCAGCCAAGTCCAAATCTCTGGGCCGGGGCCTGGAGTCCGCCCTCCTCGTTACTCCTCTCGGGGTGACTaGAGCTCGTGGTGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: ASQVQISGPGPGVRPPRYSSRGD*SSWCRA
Trigger: AGCTCTGCACCACGAGCTTCAGTCACCCCGAGAGGA...GTAACGAGGAGGGCGGACTCCAGGCCCCGGCCCAGAGATTTGGACTTGGCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307998.11
ENST00000524408.1
ENST00000526911.1
ENST00000527277.5
ENST00000531972.5
CDS-3UTR TCA 90 bp AGCCAAGTCCAAATCTCTGGGCCGGGGCCTGGAGTCCGCCCTCCTCGTTACCTCCCTCTCCTCTCGGGGTaGCTGAAGCTCGTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: SQVQISGPGPGVRPPRYLPLLSG*LKLVVQ
Trigger: CTGCACCACGAGCTTCAGTCACCCCGAGAGGAGAGG...GAGGTAACGAGGAGGGCGGACTCCAGGCCCCGGCCCAGAGATTTGGACTTGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307998.11
ENST00000524408.1
ENST00000526911.1
ENST00000527277.5
ENST00000531972.5
CDS-3UTR GCA 90 bp GCCAAGTCCAAATCTCTGGGCCGGGGCCTGGAGTCCGCCCTCCTCGTTACCTCCAGGGTGGCTCCCTCCTaGTCCTCAGAAGGTGTAGGC +
Preference number: 4 (lower is better)
Translates to: AKSKSLGRGLESALLVTSRVAPS*SSEGVG
Trigger: GCCTACACCTTCTGAGGAGCAGGAGGGAGCCACCCT...GGAGGTAACGAGGAGGGCGGACTCCAGGCCCCGGCCCAGAGATTTGGACTTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307998.11
ENST00000524408.1
ENST00000527277.5
ENST00000531972.5
CDS-3UTR GCA 90 bp AGTCCAAATCTCTGGGCCGGGGCCTGGAGTCCGCCCTCCTCGTTACCTCCTCTCCAGCCTGAGGCTTCCTaGAGTGTGACCCGCCCACCT +
Preference number: 4 (lower is better)
Translates to: SPNLWAGAWSPPSSLPPLQPEAS*SVTRPP
Trigger: AGGTGGGCGGGTCACACTGCAGGAAGCCTCAGGCTG...GAGAGGAGGTAACGAGGAGGGCGGACTCCAGGCCCCGGCCCAGAGATTTGGACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000307998.11
CDS-3UTR CCA 90 bp GGCAGAGTTAGGAATGGAACCCAGGGCCTCCTGGCGCTGTCCAGAGTGGAGTTTTTGAGCGGGAGGCACTaGTGGCGGGGGTCCCTCGCC +
Preference number: 4 (lower is better)
Translates to: GRVRNGTQGLLALSRVEFLSGRH*WRGSLA
Trigger: GGCGAGGGACCCCCGCCACCAGTGCCTCCCGCTCAA...AAACTCCACTCTGGACAGCGCCAGGAGGCCCTGGGTTCCATTCCTAACTCTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000307998.11
ENST00000528176.5
ENST00000531972.5
CDS-3UTR CCA 90 bp CCCTGCAAGCCAGCCAAGTCCAAATCTCTGGGCCGGGGCCTGGAGTCCGCCCTCAAGTTATGGCAGTCCTaGCTGGGGCGACAGTCGTGC +
Preference number: 4 (lower is better)
Translates to: PCKPAKSKSLGRGLESALKLWQS*LGRQSC
Trigger: GCACGACTGTCGCCCCAGCCAGGACTGCCATAACTT...GAGGGCGGACTCCAGGCCCCGGCCCAGAGATTTGGACTTGGCTGGCTTGCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307998.11
ENST00000531972.5
CDS-3UTR CCA 90 bp ATGGAACCCAGGGCCTCCTGGCGCTGTCCAGAGTGGAGTTTCTTAGGACCCCTGAAGCCCGGCTCGCACTaGCAGCGGAAGGAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: MEPRASWRCPEWSFLGPLKPGSH*QRKEPG
Trigger: GCCTGGCTCCTTCCGCTGCCAGTGCGAGCCGGGCTT...CAGGGGTCCTAAGAAACTCCACTCTGGACAGCGCCAGGAGGCCCTGGGTTCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307998.11
ENST00000531972.5
CDS-3UTR CCA 90 bp TCCGCCCTCCTCGTTACCTCCTCTCCTCTCGGGGTGACTGAAGCTCGTGGTGCAGCAGCGCTGCTCGCATaGGGCCCCCATGTCACACTC +
Preference number: 4 (lower is better)
Translates to: SALLVTSSPLGVTEARGAAALLA*GPHVTL
Trigger: GAGTGTGACATGGGGGCCCCATGCGAGCAGCGCTGC...TGCACCACGAGCTTCAGTCACCCCGAGAGGAGAGGAGGTAACGAGGAGGGCGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307998.11
ENST00000531972.5
CDS-3UTR CCA 90 bp CTGCAAGCCAGCCAAGTCCAAATCTCTGGGCCGGGGCCTGGAGTCCGCCCTCCTCTCGACATAGAGGGTTaGAGGCCGGGCAGAGACAGC +
Preference number: 4 (lower is better)
Translates to: LQASQVQISGPGPGVRPPLDIEG*RPGRDS
Trigger: GCTGTCTCTGCCCGGCCTCCAACCCTCTATGTCGAG...AGGAGGGCGGACTCCAGGCCCCGGCCCAGAGATTTGGACTTGGCTGGCTTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307998.11
ENST00000531972.5
CDS-3UTR TCA 90 bp TCCTGGCGCTGTCCAGAGTGGAGTTTCTTAGGACCCCTGCAAGCCAGCCAAGTCCAGGGGTTGGGGTGTTaGGCGGGAGGCACTGGTGGC +
Preference number: 4 (lower is better)
Translates to: SWRCPEWSFLGPLQASQVQGLGC*AGGTGG
Trigger: GCCACCAGTGCCTCCCGCTCAACACCCCAACCCCTG...GACTTGGCTGGCTTGCAGGGGTCCTAAGAAACTCCACTCTGGACAGCGCCAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307998.11
ENST00000531972.5
CDS-3UTR TCA 90 bp TCCGCCCTCCTCGTTACCTCCTCTCCTCTCGGGGTGACTGAAGCTCGTGGTGCACCTCTCCTCTCGGGGTaGCTGAAGCTCGTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: SALLVTSSPLGVTEARGAPLLSG*LKLVVQ
Trigger: CTGCACCACGAGCTTCAGTCACCCCGAGAGGAGAGG...TGCACCACGAGCTTCAGTCACCCCGAGAGGAGAGGAGGTAACGAGGAGGGCGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307998.11
ENST00000524408.1
ENST00000526911.1
ENST00000527277.5
ENST00000531972.5
CDS-3UTR TCA 90 bp CAGGCACAAGTAGCCCCCGTAGTGGTTGATGCACTTCATTTCCCCCTTGCAGGCCCTTCGGCGGATTCCTaGGCCAGCGCCAGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: QAQVAPVVVDALHFPLAGPSADS*ASARGR
Trigger: CCTCCCCCTGGCGCTGGCTCAGGAATCCGCCGAAGG...GCCTGCAAGGGGGAAATGAAGTGCATCAACCACTACGGGGGCTACTTGTGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000533347.5
CDS-3UTR GCA 90 bp ACTCGTCTATGTCCACACACTCGGGCCCGATCTTGCGGTAACCATCAGGGCAGGCTGGGGCGACAGTCGTaGAGGGCCTGGGCACACTCG +
Preference number: 4 (lower is better)
Translates to: TRLCPHTRARSCGNHQGRLGRQS*RAWAHS
Trigger: CGAGTGTGCCCAGGCCCTGCACGACTGTCGCCCCAG...CCTGCCCTGATGGTTACCGCAAGATCGGGCCCGAGTGTGTGGACATAGACGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530850.1
ENST00000533347.5
CDS-3UTR GCA 90 bp CAAGTCCAAATCTCTGGGCCGGGGCCTGGAGTCCGCCCTCCTCGTTACCTCCTCGCCTCGGAGCACTGGTaGGCACCAGACTCACACTCA +
Preference number: 4 (lower is better)
Translates to: QVQISGPGPGVRPPRYLLASEHW*APDSHS
Trigger: TGAGTGTGAGTCTGGTGCGCACCAGTGCTCCGAGGC...GAGGAGGTAACGAGGAGGGCGGACTCCAGGCCCCGGCCCAGAGATTTGGACTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307998.11
ENST00000531972.5
CDS-3UTR GCA 90 bp CAAGTCCAAATCTCTGGGCCGGGGCCTGGAGTCCGCCCTCCTCGTTACCTCCTCAGGGTGGCTCCCTCCTaGTCCTCAGAAGGTGTAGGC +
Preference number: 4 (lower is better)
Translates to: QVQISGPGPGVRPPRYLLRVAPS*SSEGVG
Trigger: GCCTACACCTTCTGAGGAGCAGGAGGGAGCCACCCT...GAGGAGGTAACGAGGAGGGCGGACTCCAGGCCCCGGCCCAGAGATTTGGACTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307998.11
ENST00000524408.1
ENST00000527277.5
ENST00000531972.5
CDS-3UTR CCA 90 bp CCAGCCAAGTCCAAATCTCTGGGCCGGGGCCTGGAGTCCGCCCTCCTCGTTACCGCAGTGCTGGCTGTCTaGGTCCCACTCATAGCCATC +
Preference number: 4 (lower is better)
Translates to: PAKSKSLGRGLESALLVTAVLAV*VPLIAI
Trigger: GATGGCTATGAGTGGGACCCAGACAGCCAGCACTGC...GGTAACGAGGAGGGCGGACTCCAGGCCCCGGCCCAGAGATTTGGACTTGGCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307998.11
ENST00000531972.5
CDS-3UTR CCA 90 bp GTTAGGAATGGAACCCAGGGCCTCCTGGCGCTGTCCAGAGTGGAGTTTCTTAGGTTGAGCGGGAGGCACTaGTGGCGGGGGTCCCTCGCC +
Preference number: 4 (lower is better)
Translates to: VRNGTQGLLALSRVEFLRLSGRH*WRGSLA
Trigger: GGCGAGGGACCCCCGCCACCAGTGCCTCCCGCTCAA...CCTAAGAAACTCCACTCTGGACAGCGCCAGGAGGCCCTGGGTTCCATTCCTAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307998.11
ENST00000531972.5
CDS-3UTR CCA 90 bp ATCAGGGCAGGTGCACTGATAGGAGCCAGGCAAGTTATGGCAGTCCTGGCTGGGAAGCCCGGCTCGCACTaGCAGCGGAAGGAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: IRAGALIGARQVMAVLAGKPGSH*QRKEPG
Trigger: GCCTGGCTCCTTCCGCTGCCAGTGCGAGCCGGGCTT...CCCAGCCAGGACTGCCATAACTTGCCTGGCTCCTATCAGTGCACCTGCCCTGAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000533347.5
CDS-3UTR CCA 90 bp CAGGGCCTCCTGGCGCTGTCCAGAGTGGAGTTTCTTAGGACCCCTGCAAGCCAGTTGTTAGGCCCCAGCTaGAAGCCCGGCTCGCACTGG +
Preference number: 4 (lower is better)
Translates to: QGLLALSRVEFLRTPASQLLGPS*KPGSHW
Trigger: CCAGTGCGAGCCGGGCTTCCAGCTGGGGCCTAACAA...CTGGCTTGCAGGGGTCCTAAGAAACTCCACTCTGGACAGCGCCAGGAGGCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307998.11
ENST00000531972.5
CDS-3UTR CCA 90 bp GAAGCCATCCCGATGCAGCTCATAGCCCTGGTGGCAGCGACACAGGAAGGTCCCTTGTTAGGCCCCAGCTaGAAGCCCGGCTCGCACTGG +
Preference number: 4 (lower is better)
Translates to: EAIPMQLIALVAATQEGPLLGPS*KPGSHW
Trigger: CCAGTGCGAGCCGGGCTTCCAGCTGGGGCCTAACAA...GGGACCTTCCTGTGTCGCTGCCACCAGGGCTATGAGCTGCATCGGGATGGCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533347.5
CDS-3UTR CCA 90 bp GCCTCCTGGCGCTGTCCAGAGTGGAGTTTCTTAGGACCCCTGCAAGCCAGCCAAGCAGCGCTGCTCGCATaGGGCCCCCATGTCACACTC +
Preference number: 4 (lower is better)
Translates to: ASWRCPEWSFLGPLQASQAALLA*GPHVTL
Trigger: GAGTGTGACATGGGGGCCCCATGCGAGCAGCGCTGC...TTGGCTGGCTTGCAGGGGTCCTAAGAAACTCCACTCTGGACAGCGCCAGGAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307998.11
ENST00000531972.5
CDS-3UTR CCA 90 bp CGTCTATGTCCACACACTCGGGCCCGATCTTGCGGTAACCATCAGGGCAGGTGCGCAGCGCTGCTCGCATaGGGCCCCCATGTCACACTC +
Preference number: 4 (lower is better)
Translates to: RLCPHTRARSCGNHQGRCAALLA*GPHVTL
Trigger: GAGTGTGACATGGGGGCCCCATGCGAGCAGCGCTGC...GCACCTGCCCTGATGGTTACCGCAAGATCGGGCCCGAGTGTGTGGACATAGACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533347.5
CDS-3UTR CCA 90 bp TTTGAGGCAGAGTTAGGAATGGAACCCAGGGCCTCCTGGCGCTGTCCAGAGTGGCTCTGGGCCGGGGCCTaGAGTCCGCCCTCCTCGTTA +
Preference number: 4 (lower is better)
Translates to: FEAELGMEPRASWRCPEWLWAGA*SPPSSL
Trigger: TAACGAGGAGGGCGGACTCCAGGCCCCGGCCCAGAG...CCACTCTGGACAGCGCCAGGAGGCCCTGGGTTCCATTCCTAACTCTGCCTCAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307998.11
ENST00000524408.1
ENST00000526911.1
ENST00000527277.5
ENST00000528176.5
ENST00000531645.5
ENST00000531972.5
CDS-3UTR CCA 90 bp GCAGAGTTAGGAATGGAACCCAGGGCCTCCTGGCGCTGTCCAGAGTGGAGTTTCCTCTGGGCCGGGGCCTaGAGTCCGCCCTCCTCGTTA +
Preference number: 4 (lower is better)
Translates to: AELGMEPRASWRCPEWSFLWAGA*SPPSSL
Trigger: TAACGAGGAGGGCGGACTCCAGGCCCCGGCCCAGAG...GAAACTCCACTCTGGACAGCGCCAGGAGGCCCTGGGTTCCATTCCTAACTCTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307998.11
ENST00000524408.1
ENST00000526911.1
ENST00000527277.5
ENST00000528176.5
ENST00000531645.5
ENST00000531972.5
CDS-3UTR CCA 90 bp ACCTCCTCTCCTCTCGGGGTGACTGAAGCTCGTGGTGCAGAGCTCCCAGCTCCTCCAAGTCCAAATCTCTaGGCCGGGGCCTGGAGTCCG +
Preference number: 4 (lower is better)
Translates to: TSSPLGVTEARGAELPAPPSPNL*AGAWSP
Trigger: CGGACTCCAGGCCCCGGCCCAGAGATTTGGACTTGG...AGGAGCTGGGAGCTCTGCACCACGAGCTTCAGTCACCCCGAGAGGAGAGGAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307998.11
ENST00000524408.1
ENST00000526911.1
ENST00000527277.5
ENST00000531972.5
CDS-3UTR CCA 90 bp ACCCAGGGCCTCCTGGCGCTGTCCAGAGTGGAGTTTCTTAGGACCCCTGCAAGCCCAAGTCCAAATCTCTaGGCCGGGGCCTGGAGTCCG +
Preference number: 4 (lower is better)
Translates to: TQGLLALSRVEFLRTPASPSPNL*AGAWSP
Trigger: CGGACTCCAGGCCCCGGCCCAGAGATTTGGACTTGG...GCTTGCAGGGGTCCTAAGAAACTCCACTCTGGACAGCGCCAGGAGGCCCTGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307998.11
ENST00000524408.1
ENST00000526911.1
ENST00000527277.5
ENST00000531972.5
CDS-3UTR CCA 90 bp TGTCCACACACTCGGGCCCGATCTTGCGGTAACCATCAGGGCAGGTGCACTGATGGCCCCCGGCAGTGCTaGCTGTCTGGGTCCCACTCA +
Preference number: 4 (lower is better)
Translates to: CPHTRARSCGNHQGRCTDGPRQC*LSGSHS
Trigger: TGAGTGGGACCCAGACAGCCAGCACTGCCGGGGGCC...ATCAGTGCACCTGCCCTGATGGTTACCGCAAGATCGGGCCCGAGTGTGTGGACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533347.5
CDS-3UTR TCA 90 bp GTGGTGCAGAGCTCCCAGCTCCTGTCAATGGGGGCCCCTGGGCCTTTCTCATTCAGCCCCCATGGAAGTTaGCACAGGTTTGGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: VVQSSQLLSMGAPGPFSFSPHGS*HRFGPR
Trigger: CCGAGGCCCAAACCTGTGTCAACTTCCATGGGGGCT...GAATGAGAAAGGCCCAGGGGCCCCCATTGACAGGAGCTGGGAGCTCTGCACCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000531972.5
CDS-3UTR TCA 90 bp CTCCTCGTTACCTCCTCTCCTCTCGGGGTGACTGAAGCTCGTGGTGCAGAGCTCCGCTCCGCTCCGAGGTaGTGGTCATGTAGCGGTGCA +
Preference number: 4 (lower is better)
Translates to: LLVTSSPLGVTEARGAELRSAPR*WSCSGA
Trigger: TGCACCGCTACATGACCATCACCTCGGAGCGGAGCG...GAGCTCTGCACCACGAGCTTCAGTCACCCCGAGAGGAGAGGAGGTAACGAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307998.11
ENST00000526911.1
ENST00000531972.5
CDS-3UTR TCA 90 bp GGAATGGAACCCAGGGCCTCCTGGCGCTGTCCAGAGTGGAGTTTCTTAGGACCCCCTCTCCTCTCGGGGTaGCTGAAGCTCGTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: GMEPRASWRCPEWSFLGPPLLSG*LKLVVQ
Trigger: CTGCACCACGAGCTTCAGTCACCCCGAGAGGAGAGG...GGGTCCTAAGAAACTCCACTCTGGACAGCGCCAGGAGGCCCTGGGTTCCATTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000307998.11
ENST00000524408.1
ENST00000526911.1
ENST00000527277.5
ENST00000531972.5
CDS-3UTR GCA 90 bp CTGCAAGCCAGCCAAGTCCAAATCTCTGGGCCGGGGCCTGGAGTCCGCCCTCCTAACCATCAGGGCAGGTaGACTGATAGGAGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: LQASQVQISGPGPGVRPPNHQGR*TDRSQA
Trigger: TGCCTGGCTCCTATCAGTGCACCTGCCCTGATGGTT...AGGAGGGCGGACTCCAGGCCCCGGCCCAGAGATTTGGACTTGGCTGGCTTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307998.11
ENST00000531972.5
CDS-3UTR GCA 90 bp AAGTCCAAATCTCTGGGCCGGGGCCTGGAGTCCGCCCTCCTCGTTACCTCCTCTACTCGGGCCCGATCTTaGGGTAACCATCAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: KSKSLGRGLESALLVTSSTRARS*GNHQGR
Trigger: CCTGCCCTGATGGTTACCGCAAGATCGGGCCCGAGT...AGAGGAGGTAACGAGGAGGGCGGACTCCAGGCCCCGGCCCAGAGATTTGGACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307998.11
ENST00000531972.5
CDS-3UTR CCA 90 bp GCGCTGTCCAGAGTGGAGTTTCTTAGGACCCCTGCAAGCCAGCCAAGTCCAAATGACGGCACAGCTCCCTaGACGCGCGGCCCCAGGAAG +
Preference number: 4 (lower is better)
Translates to: ALSRVEFLRTPASQPSPNDGTAP*TRGPRK
Trigger: CTTCCTGGGGCCGCGCGTCCAGGGAGCTGTGCCGTC...ATTTGGACTTGGCTGGCTTGCAGGGGTCCTAAGAAACTCCACTCTGGACAGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307998.11
ENST00000531972.5
CDS-3UTR CCA 90 bp TCCAGAGTGGAGTTTCTTAGGACCCCTGCAAGCCAGCCAAGTCCAAATCTCTGGAGCGGGAGGCACTGGTaGCGGGGGTCCCTCGCCGTG +
Preference number: 4 (lower is better)
Translates to: SRVEFLRTPASQPSPNLWSGRHW*RGSLAV
Trigger: CACGGCGAGGGACCCCCGCCACCAGTGCCTCCCGCT...CCAGAGATTTGGACTTGGCTGGCTTGCAGGGGTCCTAAGAAACTCCACTCTGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307998.11
ENST00000531972.5
CDS-3UTR CCA 90 bp CTCCTGGCGCTGTCCAGAGTGGAGTTTCTTAGGACCCCTGCAAGCCAGCCAAGTCTGGTGGGCAGGGGTTaGGGTGTTGAGCGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: LLALSRVEFLRTPASQPSLVGRG*GVEREA
Trigger: TGCCTCCCGCTCAACACCCCAACCCCTGCCCACCAG...ACTTGGCTGGCTTGCAGGGGTCCTAAGAAACTCCACTCTGGACAGCGCCAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307998.11
ENST00000531972.5
CDS-3UTR CCA 90 bp GGTAGCGGCACTCGTCTATGTCCACACACTCGGGCCCGATCTTGCGGTAACCATCTGGTGGGCAGGGGTTaGGGTGTTGAGCGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: GSGTRLCPHTRARSCGNHLVGRG*GVEREA
Trigger: TGCCTCCCGCTCAACACCCCAACCCCTGCCCACCAG...ATGGTTACCGCAAGATCGGGCCCGAGTGTGTGGACATAGACGAGTGCCGCTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530850.1
ENST00000533347.5
CDS-3UTR CCA 90 bp ATAGCCCTGGTGGCAGCGACACAGGAAGGTCCCATAGGAGTTGAAGCAGCGCTGCTGGTGGGCAGGGGTTaGGGTGTTGAGCGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: IALVAATQEGPIGVEAALLVGRG*GVEREA
Trigger: TGCCTCCCGCTCAACACCCCAACCCCTGCCCACCAG...CAGCGCTGCTTCAACTCCTATGGGACCTTCCTGTGTCGCTGCCACCAGGGCTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533347.5
CDS-3UTR CCA 90 bp CGTCTATGTCCACACACTCGGGCCCGATCTTGCGGTAACCATCAGGGCAGGTGCTATGGCAGTCCTGGCTaGGGCGACAGTCGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: RLCPHTRARSCGNHQGRCYGSPG*GDSRAG
Trigger: CCCTGCACGACTGTCGCCCCAGCCAGGACTGCCATA...GCACCTGCCCTGATGGTTACCGCAAGATCGGGCCCGAGTGTGTGGACATAGACG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530850.1
ENST00000533347.5
CDS-3UTR CCA 90 bp TCAACACAGGAGCGGTTGTTAGGCCCCAGCTGGAAGCCCGGCTCGCACTGGCAGAAGTTATGGCAGTCCTaGCTGGGGCGACAGTCGTGC +
Preference number: 4 (lower is better)
Translates to: STQERLLGPSWKPGSHWQKLWQS*LGRQSC
Trigger: GCACGACTGTCGCCCCAGCCAGGACTGCCATAACTT...CTGCCAGTGCGAGCCGGGCTTCCAGCTGGGGCCTAACAACCGCTCCTGTGTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533347.5
CDS-3UTR CCA 90 bp CTCGGGCCCGATCTTGCGGTAACCATCAGGGCAGGTGCACTGATAGGAGCCAGGGAGCCAGGCAAGTTATaGCAGTCCTGGCTGGGGCGA +
Preference number: 4 (lower is better)
Translates to: LGPDLAVTIRAGALIGAREPGKL*QSWLGR
Trigger: TCGCCCCAGCCAGGACTGCCATAACTTGCCTGGCTC...CCTGGCTCCTATCAGTGCACCTGCCCTGATGGTTACCGCAAGATCGGGCCCGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530850.1
ENST00000533347.5
CDS-3UTR CCA 90 bp GAGGCAGAGTTAGGAATGGAACCCAGGGCCTCCTGGCGCTGTCCAGAGTGGAGTTTGTTAGGCCCCAGCTaGAAGCCCGGCTCGCACTGG +
Preference number: 4 (lower is better)
Translates to: EAELGMEPRASWRCPEWSLLGPS*KPGSHW
Trigger: CCAGTGCGAGCCGGGCTTCCAGCTGGGGCCTAACAA...ACTCCACTCTGGACAGCGCCAGGAGGCCCTGGGTTCCATTCCTAACTCTGCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307998.11
ENST00000528176.5
ENST00000531972.5
CDS-3UTR CCA 90 bp GGCAGAGTTAGGAATGGAACCCAGGGCCTCCTGGCGCTGTCCAGAGTGGAGTTTGCAGCGCTGCTCGCATaGGGCCCCCATGTCACACTC +
Preference number: 4 (lower is better)
Translates to: GRVRNGTQGLLALSRVEFAALLA*GPHVTL
Trigger: GAGTGTGACATGGGGGCCCCATGCGAGCAGCGCTGC...AAACTCCACTCTGGACAGCGCCAGGAGGCCCTGGGTTCCATTCCTAACTCTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307998.11
ENST00000528176.5
ENST00000531972.5
CDS-3UTR CCA 90 bp AAGTCCAAATCTCTGGGCCGGGGCCTGGAGTCCGCCCTCCTCGTTACCTCCTCTCTTGGCAGAGGCGTGTaGCCAGCAGCTGGTAACCCT +
Preference number: 4 (lower is better)
Translates to: KSKSLGRGLESALLVTSSLGRGV*PAAGNP
Trigger: AGGGTTACCAGCTGCTGGCCACACGCCTCTGCCAAG...AGAGGAGGTAACGAGGAGGGCGGACTCCAGGCCCCGGCCCAGAGATTTGGACTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307998.11
ENST00000531972.5
CDS-3UTR CCA 90 bp GCCAAGTCCAAATCTCTGGGCCGGGGCCTGGAGTCCGCCCTCCTCGTTACCTCCAAGTTGACACAGGTTTaGGCCTCGGAGCACTGGTGC +
Preference number: 4 (lower is better)
Translates to: AKSKSLGRGLESALLVTSKLTQV*ASEHWC
Trigger: GCACCAGTGCTCCGAGGCCCAAACCTGTGTCAACTT...GGAGGTAACGAGGAGGGCGGACTCCAGGCCCCGGCCCAGAGATTTGGACTTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307998.11
ENST00000531972.5
CDS-3UTR CCA 90 bp GCAAGCCAGCCAAGTCCAAATCTCTGGGCCGGGGCCTGGAGTCCGCCCTCCTCGTGTAGCGGTGCACAATaGATGAAGGCTGCTCTCGAC +
Preference number: 4 (lower is better)
Translates to: ASQPSPNLWAGAWSPPSSCSGAQ*MKAALD
Trigger: GTCGAGAGCAGCCTTCATCCATTGTGCACCGCTACA...CGAGGAGGGCGGACTCCAGGCCCCGGCCCAGAGATTTGGACTTGGCTGGCTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307998.11
ENST00000531972.5
CDS-3UTR CCA 90 bp ATGGAACCCAGGGCCTCCTGGCGCTGTCCAGAGTGGAGTTTCTTAGGACCCCTGCCAAGTCCAAATCTCTaGGCCGGGGCCTGGAGTCCG +
Preference number: 4 (lower is better)
Translates to: MEPRASWRCPEWSFLGPLPSPNL*AGAWSP
Trigger: CGGACTCCAGGCCCCGGCCCAGAGATTTGGACTTGG...CAGGGGTCCTAAGAAACTCCACTCTGGACAGCGCCAGGAGGCCCTGGGTTCCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307998.11
ENST00000524408.1
ENST00000526911.1
ENST00000527277.5
ENST00000531972.5
CDS-3UTR CCA 90 bp GCCTTTCTCATTCTGCCCCTCACAACAGGCTCCTCAGCTAGGGTAGCTGCAGGGGTCAATGGGGGCCCCTaGGCCTCAGCCACCAGGACT +
Preference number: 4 (lower is better)
Translates to: AFLILPLTTGSSARVAAGVNGGP*ASATRT
Trigger: AGTCCTGGTGGCTGAGGCCCAGGGGCCCCCATTGAC...CCCTGCAGCTACCCTAGCTGAGGAGCCTGTTGTGAGGGGCAGAATGAGAAAGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000527277.5
CDS-3UTR TCA 90 bp CAAGTCCAAATCTCTGGGCCGGGGCCTGGAGTCCGCCCTCCTCGTTACCTCCTCAGCCCCCGTAGTGGTTaGTGCACTTCATTTCCCCCT +
Preference number: 4 (lower is better)
Translates to: QVQISGPGPGVRPPRYLLSPRSG*CTSFPP
Trigger: AGGGGGAAATGAAGTGCATCAACCACTACGGGGGCT...GAGGAGGTAACGAGGAGGGCGGACTCCAGGCCCCGGCCCAGAGATTTGGACTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307998.11
ENST00000531972.5
CDS-3UTR TCA 90 bp GCCCTCCTCGTTACCTCCTCTCCTCTCGGGGTGACTGAAGCTCGTGGTGCAGAGAACGGCCTGGCTCGTTaGTGCAGCGGTACTGACAGA +
Preference number: 4 (lower is better)
Translates to: ALLVTSSPLGVTEARGAENGLAR*CSGTDR
Trigger: TCTGTCAGTACCGCTGCATCAACGAGCCAGGCCGTT...CTCTGCACCACGAGCTTCAGTCACCCCGAGAGGAGAGGAGGTAACGAGGAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307998.11
ENST00000531972.5
CDS-3UTR TCA 90 bp CTGGAGTCCGCCCTCCTCGTTACCTCCTCTCCTCTCGGGGTGACTGAAGCTCGTAACGGCCTGGCTCGTTaGTGCAGCGGTACTGACAGA +
Preference number: 4 (lower is better)
Translates to: LESALLVTSSPLGVTEARNGLAR*CSGTDR
Trigger: TCTGTCAGTACCGCTGCATCAACGAGCCAGGCCGTT...ACGAGCTTCAGTCACCCCGAGAGGAGAGGAGGTAACGAGGAGGGCGGACTCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307998.11
ENST00000531972.5
CDS-3UTR TCA 90 bp GAGGCAGAGTTAGGAATGGAACCCAGGGCCTCCTGGCGCTGTCCAGAGTGGAGTAGCCCCCATGGAAGTTaGCACAGGTTTGGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: EAELGMEPRASWRCPEWSSPHGS*HRFGPR
Trigger: CCGAGGCCCAAACCTGTGTCAACTTCCATGGGGGCT...ACTCCACTCTGGACAGCGCCAGGAGGCCCTGGGTTCCATTCCTAACTCTGCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307998.11
ENST00000528176.5
ENST00000531645.5
ENST00000531972.5
CDS-3UTR TCA 90 bp GCAGAGTTAGGAATGGAACCCAGGGCCTCCTGGCGCTGTCCAGAGTGGAGTTTCCGCTCCGCTCCGAGGTaGTGGTCATGTAGCGGTGCA +
Preference number: 4 (lower is better)
Translates to: AELGMEPRASWRCPEWSFRSAPR*WSCSGA
Trigger: TGCACCGCTACATGACCATCACCTCGGAGCGGAGCG...GAAACTCCACTCTGGACAGCGCCAGGAGGCCCTGGGTTCCATTCCTAACTCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307998.11
ENST00000526911.1
ENST00000528176.5
ENST00000531645.5
ENST00000531972.5
CDS-3UTR TCA 90 bp GGCAGAGTTAGGAATGGAACCCAGGGCCTCCTGGCGCTGTCCAGAGTGGAGTTTCGCTCCGCTCCGAGGTaGTGGTCATGTAGCGGTGCA +
Preference number: 4 (lower is better)
Translates to: GRVRNGTQGLLALSRVEFRSAPR*WSCSGA
Trigger: TGCACCGCTACATGACCATCACCTCGGAGCGGAGCG...AAACTCCACTCTGGACAGCGCCAGGAGGCCCTGGGTTCCATTCCTAACTCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307998.11
ENST00000526911.1
ENST00000528176.5
ENST00000531645.5
ENST00000531972.5
CDS-3UTR TCA 90 bp GGAATGGAACCCAGGGCCTCCTGGCGCTGTCCAGAGTGGAGTTTCTTAGGACCCTCCTCTCGGGGTGACTaGAGCTCGTGGTGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: GMEPRASWRCPEWSFLGPSSRGD*SSWCRA
Trigger: AGCTCTGCACCACGAGCTTCAGTCACCCCGAGAGGA...GGGTCCTAAGAAACTCCACTCTGGACAGCGCCAGGAGGCCCTGGGTTCCATTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307998.11
ENST00000524408.1
ENST00000526911.1
ENST00000527277.5
ENST00000531972.5
CDS-3UTR TCA 90 bp GAACCCAGGGCCTCCTGGCGCTGTCCAGAGTGGAGTTTCTTAGGACCCCTGCAATCCTCTCGGGGTGACTaGAGCTCGTGGTGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: EPRASWRCPEWSFLGPLQSSRGD*SSWCRA
Trigger: AGCTCTGCACCACGAGCTTCAGTCACCCCGAGAGGA...TTGCAGGGGTCCTAAGAAACTCCACTCTGGACAGCGCCAGGAGGCCCTGGGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307998.11
ENST00000524408.1
ENST00000526911.1
ENST00000527277.5
ENST00000531972.5
CDS-3UTR TCA 90 bp TTTGAGGCAGAGTTAGGAATGGAACCCAGGGCCTCCTGGCGCTGTCCAGAGTGGCCTCTCCTCTCGGGGTaGCTGAAGCTCGTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: FEAELGMEPRASWRCPEWPLLSG*LKLVVQ
Trigger: CTGCACCACGAGCTTCAGTCACCCCGAGAGGAGAGG...CCACTCTGGACAGCGCCAGGAGGCCCTGGGTTCCATTCCTAACTCTGCCTCAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307998.11
ENST00000524408.1
ENST00000526911.1
ENST00000527277.5
ENST00000528176.5
ENST00000531645.5
ENST00000531972.5
CDS-3UTR TCA 90 bp GGCAGAGTTAGGAATGGAACCCAGGGCCTCCTGGCGCTGTCCAGAGTGGAGTTTCCTCTCCTCTCGGGGTaGCTGAAGCTCGTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: GRVRNGTQGLLALSRVEFPLLSG*LKLVVQ
Trigger: CTGCACCACGAGCTTCAGTCACCCCGAGAGGAGAGG...AAACTCCACTCTGGACAGCGCCAGGAGGCCCTGGGTTCCATTCCTAACTCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307998.11
ENST00000524408.1
ENST00000526911.1
ENST00000527277.5
ENST00000528176.5
ENST00000531645.5
ENST00000531972.5
CDS-3UTR TCA 90 bp GCAAGTTATGGCAGTCCTGGCTGGGGCGACAGTCGTGCAGGGCCTGGGCACACTTGGTCAGACACTCGTTaGCATCCTTCCTGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: ASYGSPGWGDSRAGPGHTWSDTR*HPSCPR
Trigger: CCTGGGACAGGAAGGATGTCAACGAGTGTCTGACCA...AGTGTGCCCAGGCCCTGCACGACTGTCGCCCCAGCCAGGACTGCCATAACTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530850.1
CDS-3UTR GCA 90 bp GCACTGATAGGAGCCAGGCAAGTTATGGCAGTCCTGGCTGGGGCGACAGTCGTGACTCGGGCCCGATCTTaGGGTAACCATCAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: ALIGARQVMAVLAGATVVTRARS*GNHQGR
Trigger: CCTGCCCTGATGGTTACCGCAAGATCGGGCCCGAGT...CACGACTGTCGCCCCAGCCAGGACTGCCATAACTTGCCTGGCTCCTATCAGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530850.1
ENST00000533347.5
CDS-3UTR GCA 90 bp GCAGAGTTAGGAATGGAACCCAGGGCCTCCTGGCGCTGTCCAGAGTGGAGTTTCGAGTTGAAGCAGCGCTaGTCGCATGGGGCCCCCATG +
Preference number: 4 (lower is better)
Translates to: AELGMEPRASWRCPEWSFELKQR*SHGAPM
Trigger: CATGGGGGCCCCATGCGAGCAGCGCTGCTTCAACTC...GAAACTCCACTCTGGACAGCGCCAGGAGGCCCTGGGTTCCATTCCTAACTCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307998.11
ENST00000528176.5
ENST00000531972.5
CDS-3UTR GCA 90 bp CCGATGCAGCTCATAGCCCTGGTGGCAGCGACACAGGAAGGTCCCATAGGAGTTGAGTTGAAGCAGCGCTaGTCGCATGGGGCCCCCATG +
Preference number: 4 (lower is better)
Translates to: PMQLIALVAATQEGPIGVELKQR*SHGAPM
Trigger: CATGGGGGCCCCATGCGAGCAGCGCTGCTTCAACTC...AACTCCTATGGGACCTTCCTGTGTCGCTGCCACCAGGGCTATGAGCTGCATCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533347.5
CDS-3UTR GCA 90 bp ATGGAACCCAGGGCCTCCTGGCGCTGTCCAGAGTGGAGTTTCTTAGGACCCCTGAGGGTGGCTCCCTCCTaGTCCTCAGAAGGTGTAGGC +
Preference number: 4 (lower is better)
Translates to: MEPRASWRCPEWSFLGPLRVAPS*SSEGVG
Trigger: GCCTACACCTTCTGAGGAGCAGGAGGGAGCCACCCT...CAGGGGTCCTAAGAAACTCCACTCTGGACAGCGCCAGGAGGCCCTGGGTTCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307998.11
ENST00000524408.1
ENST00000527277.5
ENST00000531972.5
CDS-3UTR CCA 90 bp GGCAGGTGCACTGATAGGAGCCAGGCAAGTTATGGCAGTCCTGGCTGGGGCGACGCAGTGCTGGCTGTCTaGGTCCCACTCATAGCCATC +
Preference number: 4 (lower is better)
Translates to: GRCTDRSQASYGSPGWGDAVLAV*VPLIAI
Trigger: GATGGCTATGAGTGGGACCCAGACAGCCAGCACTGC...GTCGCCCCAGCCAGGACTGCCATAACTTGCCTGGCTCCTATCAGTGCACCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533347.5
CDS-3UTR CCA 90 bp TGTCCACACACTCGGGCCCGATCTTGCGGTAACCATCAGGGCAGGTGCACTGATTATGGCAGTCCTGGCTaGGGCGACAGTCGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: CPHTRARSCGNHQGRCTDYGSPG*GDSRAG
Trigger: CCCTGCACGACTGTCGCCCCAGCCAGGACTGCCATA...ATCAGTGCACCTGCCCTGATGGTTACCGCAAGATCGGGCCCGAGTGTGTGGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530850.1
ENST00000533347.5
CDS-3UTR CCA 90 bp GGCAGAGTTAGGAATGGAACCCAGGGCCTCCTGGCGCTGTCCAGAGTGGAGTTTTTGTTAGGCCCCAGCTaGAAGCCCGGCTCGCACTGG +
Preference number: 4 (lower is better)
Translates to: GRVRNGTQGLLALSRVEFLLGPS*KPGSHW
Trigger: CCAGTGCGAGCCGGGCTTCCAGCTGGGGCCTAACAA...AAACTCCACTCTGGACAGCGCCAGGAGGCCCTGGGTTCCATTCCTAACTCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307998.11
ENST00000528176.5
ENST00000531972.5
CDS-3UTR CCA 90 bp AGCCAAGTCCAAATCTCTGGGCCGGGGCCTGGAGTCCGCCCTCCTCGTTACCTCCACTCATCAATGTCTTaGCAGAGGCGTGTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: SQVQISGPGPGVRPPRYLHSSMS*QRRVAS
Trigger: GCTGGCCACACGCCTCTGCCAAGACATTGATGAGTG...GAGGTAACGAGGAGGGCGGACTCCAGGCCCCGGCCCAGAGATTTGGACTTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307998.11
ENST00000531972.5
CDS-3UTR CCA 90 bp CTCCTGGCGCTGTCCAGAGTGGAGTTTCTTAGGACCCCTGCAAGCCAGCCAAGTCCAAGTCCAAATCTCTaGGCCGGGGCCTGGAGTCCG +
Preference number: 4 (lower is better)
Translates to: LLALSRVEFLRTPASQPSPSPNL*AGAWSP
Trigger: CGGACTCCAGGCCCCGGCCCAGAGATTTGGACTTGG...ACTTGGCTGGCTTGCAGGGGTCCTAAGAAACTCCACTCTGGACAGCGCCAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307998.11
ENST00000524408.1
ENST00000526911.1
ENST00000527277.5
ENST00000531972.5
CDS-3UTR CCA 90 bp GGCAGAGTTAGGAATGGAACCCAGGGCCTCCTGGCGCTGTCCAGAGTGGAGTTTCCAAGTCCAAATCTCTaGGCCGGGGCCTGGAGTCCG +
Preference number: 4 (lower is better)
Translates to: GRVRNGTQGLLALSRVEFPSPNL*AGAWSP
Trigger: CGGACTCCAGGCCCCGGCCCAGAGATTTGGACTTGG...AAACTCCACTCTGGACAGCGCCAGGAGGCCCTGGGTTCCATTCCTAACTCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307998.11
ENST00000524408.1
ENST00000526911.1
ENST00000527277.5
ENST00000528176.5
ENST00000531645.5
ENST00000531972.5
CDS-3UTR CCA 90 bp GAGGCAGAGTTAGGAATGGAACCCAGGGCCTCCTGGCGCTGTCCAGAGTGGAGTGTCAATGGGGGCCCCTaGGCCTTTCTCATTCTGCCC +
Preference number: 4 (lower is better)
Translates to: EAELGMEPRASWRCPEWSVNGGP*AFLILP
Trigger: GGGCAGAATGAGAAAGGCCCAGGGGCCCCCATTGAC...ACTCCACTCTGGACAGCGCCAGGAGGCCCTGGGTTCCATTCCTAACTCTGCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531645.5
ENST00000531972.5
3UTR CAA 72 bp CCCATGTCACACTCGTTCACATCAACACAGGAGCGGTaGTTAGGCCCCAGCTGGAAGCCCGGCTCGCACTGG +
Preference number: 4 (lower is better)
Translates to: PMSHSFTSTQER*LGPSWKPGSHW
Trigger: CCAGTGCGAGCCGGGCTTCCAGCTGGGGCCTAACAACCGCTCCTGTGTTGATGTGAACGAGTGTGACATGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533347.5
CDS-3UTR TCA 90 bp TCCGCCCTCCTCGTTACCTCCTCTCCTCTCGGGGTGACTGAAGCTCGTGGTGCAAGCCCCCGTAGTGGTTaGTGCACTTCATTTCCCCCT +
Preference number: 4 (lower is better)
Translates to: SALLVTSSPLGVTEARGASPRSG*CTSFPP
Trigger: AGGGGGAAATGAAGTGCATCAACCACTACGGGGGCT...TGCACCACGAGCTTCAGTCACCCCGAGAGGAGAGGAGGTAACGAGGAGGGCGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000307998.11
ENST00000531972.5
CDS-3UTR TCA 90 bp AATGTACAGTTTGAGGCAGAGTTAGGAATGGAACCCAGGGCCTCCTGGCGCTGTCAGGGGTTGGGGTGTTaGGCGGGAGGCACTGGTGGC +
Preference number: 4 (lower is better)
Translates to: NVQFEAELGMEPRASWRCQGLGC*AGGTGG
Trigger: GCCACCAGTGCCTCCCGCTCAACACCCCAACCCCTG...ACAGCGCCAGGAGGCCCTGGGTTCCATTCCTAACTCTGCCTCAAACTGTACATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307998.11
ENST00000528176.5
ENST00000531972.5
CDS-3UTR TCA 90 bp CAGAGCTCCCAGCTCCTGTCAATGGGGGCCCCTGGGCCTGAACATATAGAGACCAGGTCCCATAGGAGTTaGAGCAGCGCTGCTCGCATG +
Preference number: 4 (lower is better)
Translates to: QSSQLLSMGAPGPEHIETRSHRS*SSAARM
Trigger: CATGCGAGCAGCGCTGCTTCAACTCCTATGGGACCT...GGTCTCTATATGTTCAGGCCCAGGGGCCCCCATTGACAGGAGCTGGGAGCTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307998.11
CDS-3UTR TCA 90 bp GGCAGAGTTAGGAATGGAACCCAGGGCCTCCTGGCGCTGTCCAGAGTGGAGTTTTCCTCTCGGGGTGACTaGAGCTCGTGGTGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: GRVRNGTQGLLALSRVEFSSRGD*SSWCRA
Trigger: AGCTCTGCACCACGAGCTTCAGTCACCCCGAGAGGA...AAACTCCACTCTGGACAGCGCCAGGAGGCCCTGGGTTCCATTCCTAACTCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307998.11
ENST00000524408.1
ENST00000526911.1
ENST00000527277.5
ENST00000528176.5
ENST00000531645.5
ENST00000531972.5
CDS-3UTR GCA 90 bp GCCTTTCTCATTCTGCCCCTCACAACAGGCTCCTCAGCTAGGGTAGCTGCAGGGTTGACATCCCGGCAGTaGTGGCTGTCTGGGTCCCAC +
Preference number: 4 (lower is better)
Translates to: AFLILPLTTGSSARVAAGLTSRQ*WLSGSH
Trigger: GTGGGACCCAGACAGCCAGCACTGCCGGGATGTCAA...CCCTGCAGCTACCCTAGCTGAGGAGCCTGTTGTGAGGGGCAGAATGAGAAAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307998.11
ENST00000531972.5
CDS-3UTR GCA 90 bp AATGTACAGTTTGAGGCAGAGTTAGGAATGGAACCCAGGGCCTCCTGGCGCTGTCTGGGGCGACAGTCGTaGAGGGCCTGGGCACACTCG +
Preference number: 4 (lower is better)
Translates to: NVQFEAELGMEPRASWRCLGRQS*RAWAHS
Trigger: CGAGTGTGCCCAGGCCCTGCACGACTGTCGCCCCAG...ACAGCGCCAGGAGGCCCTGGGTTCCATTCCTAACTCTGCCTCAAACTGTACATT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307998.11
ENST00000528176.5
ENST00000531972.5
CDS-3UTR GCA 90 bp AGGGCAGGTGCACTGATAGGAGCCAGGCAAGTTATGGCAGTCCTGGCTGGGGCGAACCATCAGGGCAGGTaGACTGATAGGAGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: RAGALIGARQVMAVLAGANHQGR*TDRSQA
Trigger: TGCCTGGCTCCTATCAGTGCACCTGCCCTGATGGTT...CGCCCCAGCCAGGACTGCCATAACTTGCCTGGCTCCTATCAGTGCACCTGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530850.1
ENST00000533347.5
CDS-3UTR GCA 90 bp GCAGAGTTAGGAATGGAACCCAGGGCCTCCTGGCGCTGTCCAGAGTGGAGTTTCACTCGGGCCCGATCTTaGGGTAACCATCAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: AELGMEPRASWRCPEWSFTRARS*GNHQGR
Trigger: CCTGCCCTGATGGTTACCGCAAGATCGGGCCCGAGT...GAAACTCCACTCTGGACAGCGCCAGGAGGCCCTGGGTTCCATTCCTAACTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307998.11
ENST00000528176.5
ENST00000531972.5
CDS-3UTR GCA 90 bp GCTCGCATGGGGCCCCCATGTCACACTCGTTCACATCAACACAGGAGCGGTTGTACTCGGGCCCGATCTTaGGGTAACCATCAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: ARMGPPCHTRSHQHRSGCTRARS*GNHQGR
Trigger: CCTGCCCTGATGGTTACCGCAAGATCGGGCCCGAGT...ACAACCGCTCCTGTGTTGATGTGAACGAGTGTGACATGGGGGCCCCATGCGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533347.5
CDS-3UTR GCA 90 bp TCCTGGCGCTGTCCAGAGTGGAGTTTCTTAGGACCCCTGCAAGCCAGCCAAGTCGCCTCGGAGCACTGGTaGGCACCAGACTCACACTCA +
Preference number: 4 (lower is better)
Translates to: SWRCPEWSFLGPLQASQVASEHW*APDSHS
Trigger: TGAGTGTGAGTCTGGTGCGCACCAGTGCTCCGAGGC...GACTTGGCTGGCTTGCAGGGGTCCTAAGAAACTCCACTCTGGACAGCGCCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307998.11
ENST00000531972.5
CDS-3UTR GCA 90 bp GCAGAGTTAGGAATGGAACCCAGGGCCTCCTGGCGCTGTCCAGAGTGGAGTTTCGCCTCGGAGCACTGGTaGGCACCAGACTCACACTCA +
Preference number: 4 (lower is better)
Translates to: AELGMEPRASWRCPEWSFASEHW*APDSHS
Trigger: TGAGTGTGAGTCTGGTGCGCACCAGTGCTCCGAGGC...GAAACTCCACTCTGGACAGCGCCAGGAGGCCCTGGGTTCCATTCCTAACTCTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307998.11
ENST00000528176.5
ENST00000531645.5
ENST00000531972.5
CDS-3UTR GCA 90 bp TTTGAGGCAGAGTTAGGAATGGAACCCAGGGCCTCCTGGCGCTGTCCAGAGTGGGCCTCGGAGCACTGGTaGGCACCAGACTCACACTCA +
Preference number: 4 (lower is better)
Translates to: FEAELGMEPRASWRCPEWASEHW*APDSHS
Trigger: TGAGTGTGAGTCTGGTGCGCACCAGTGCTCCGAGGC...CCACTCTGGACAGCGCCAGGAGGCCCTGGGTTCCATTCCTAACTCTGCCTCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307998.11
ENST00000528176.5
ENST00000531645.5
ENST00000531972.5
CDS-3UTR GCA 90 bp CCCTGCAAGCCAGCCAAGTCCAAATCTCTGGGCCGGGGCCTGGAGTCCGCCCTCACAATGGATGAAGGCTaGTCTCGACATAGAGGGTTG +
Preference number: 4 (lower is better)
Translates to: PCKPAKSKSLGRGLESALTMDEG*SRHRGL
Trigger: CAACCCTCTATGTCGAGAGCAGCCTTCATCCATTGT...GAGGGCGGACTCCAGGCCCCGGCCCAGAGATTTGGACTTGGCTGGCTTGCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307998.11
ENST00000531972.5
CDS-3UTR GCA 90 bp ACCCCTGCAAGCCAGCCAAGTCCAAATCTCTGGGCCGGGGCCTGGAGTCCGCCCACAATGGATGAAGGCTaGTCTCGACATAGAGGGTTG +
Preference number: 4 (lower is better)
Translates to: TPASQPSPNLWAGAWSPPTMDEG*SRHRGL
Trigger: CAACCCTCTATGTCGAGAGCAGCCTTCATCCATTGT...GGGCGGACTCCAGGCCCCGGCCCAGAGATTTGGACTTGGCTGGCTTGCAGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307998.11
ENST00000531972.5
CDS-3UTR GCA 90 bp AGGAATGGAACCCAGGGCCTCCTGGCGCTGTCCAGAGTGGAGTTTCTTAGGACCAGGGTGGCTCCCTCCTaGTCCTCAGAAGGTGTAGGC +
Preference number: 4 (lower is better)
Translates to: RNGTQGLLALSRVEFLRTRVAPS*SSEGVG
Trigger: GCCTACACCTTCTGAGGAGCAGGAGGGAGCCACCCT...GGTCCTAAGAAACTCCACTCTGGACAGCGCCAGGAGGCCCTGGGTTCCATTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307998.11
ENST00000524408.1
ENST00000527277.5
ENST00000531972.5
CDS-3UTR GCA 90 bp TTTGAGGCAGAGTTAGGAATGGAACCCAGGGCCTCCTGGCGCTGTCCAGAGTGGAGGGTGGCTCCCTCCTaGTCCTCAGAAGGTGTAGGC +
Preference number: 4 (lower is better)
Translates to: FEAELGMEPRASWRCPEWRVAPS*SSEGVG
Trigger: GCCTACACCTTCTGAGGAGCAGGAGGGAGCCACCCT...CCACTCTGGACAGCGCCAGGAGGCCCTGGGTTCCATTCCTAACTCTGCCTCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307998.11
ENST00000524408.1
ENST00000527277.5
ENST00000531645.5
ENST00000531972.5
CDS-3UTR GCA 90 bp TTCACATCAACACAGGAGCGGTTGTTAGGCCCCAGCTGGAAGCCCGGCTCGCACACACTCGTTGACATCTaGAGAGAGGGGCCTGCTGGG +
Preference number: 4 (lower is better)
Translates to: FTSTQERLLGPSWKPGSHTLVDI*REGPAG
Trigger: CCCAGCAGGCCCCTCTCTGCAGATGTCAACGAGTGT...GTGCGAGCCGGGCTTCCAGCTGGGGCCTAACAACCGCTCCTGTGTTGATGTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533347.5
CDS-3UTR CCA 90 bp GCTTATCCAAATGTACAGTTTGAGGCAGAGTTAGGAATGGAACCCAGGGCCTCCGGAGCATCCTGGGGTTaGGCCCGCGACACCCCCGCG +
Preference number: 4 (lower is better)
Translates to: AYPNVQFEAELGMEPRASGASWG*ARDTPA
Trigger: CGCGGGGGTGTCGCGGGCCCAACCCCAGGATGCTCC...GGAGGCCCTGGGTTCCATTCCTAACTCTGCCTCAAACTGTACATTTGGATAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307998.11
ENST00000528176.5
ENST00000531972.5
CDS-3UTR CCA 90 bp CTCCTCGTTACCTCCTCTCCTCTCGGGGTGACTGAAGCTCGTGGTGCAGAGCTCGCAGTGCTGGCTGTCTaGGTCCCACTCATAGCCATC +
Preference number: 4 (lower is better)
Translates to: LLVTSSPLGVTEARGAELAVLAV*VPLIAI
Trigger: GATGGCTATGAGTGGGACCCAGACAGCCAGCACTGC...GAGCTCTGCACCACGAGCTTCAGTCACCCCGAGAGGAGAGGAGGTAACGAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307998.11
ENST00000531972.5
CDS-3UTR CCA 90 bp CTCCTGGCGCTGTCCAGAGTGGAGTTTCTTAGGACCCCTGCAAGCCAGCCAAGTACATCCCGGCAGTGCTaGCTGTCTGGGTCCCACTCA +
Preference number: 4 (lower is better)
Translates to: LLALSRVEFLRTPASQPSTSRQC*LSGSHS
Trigger: TGAGTGGGACCCAGACAGCCAGCACTGCCGGGATGT...ACTTGGCTGGCTTGCAGGGGTCCTAAGAAACTCCACTCTGGACAGCGCCAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307998.11
ENST00000531972.5
CDS-3UTR CCA 90 bp GGCAGAGTTAGGAATGGAACCCAGGGCCTCCTGGCGCTGTCCAGAGTGGAGTTTACATCCCGGCAGTGCTaGCTGTCTGGGTCCCACTCA +
Preference number: 4 (lower is better)
Translates to: GRVRNGTQGLLALSRVEFTSRQC*LSGSHS
Trigger: TGAGTGGGACCCAGACAGCCAGCACTGCCGGGATGT...AAACTCCACTCTGGACAGCGCCAGGAGGCCCTGGGTTCCATTCCTAACTCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307998.11
ENST00000528176.5
ENST00000531972.5
CDS-3UTR CCA 90 bp AGGAATGGAACCCAGGGCCTCCTGGCGCTGTCCAGAGTGGAGTTTCTTAGGACCACATCCCGGCAGTGCTaGCTGTCTGGGTCCCACTCA +
Preference number: 4 (lower is better)
Translates to: RNGTQGLLALSRVEFLRTTSRQC*LSGSHS
Trigger: TGAGTGGGACCCAGACAGCCAGCACTGCCGGGATGT...GGTCCTAAGAAACTCCACTCTGGACAGCGCCAGGAGGCCCTGGGTTCCATTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307998.11
ENST00000531972.5
CDS-3UTR CCA 90 bp TTTGAGGCAGAGTTAGGAATGGAACCCAGGGCCTCCTGGCGCTGTCCAGAGTGGGAGCCAGGCAAGTTATaGCAGTCCTGGCTGGGGCGA +
Preference number: 4 (lower is better)
Translates to: FEAELGMEPRASWRCPEWEPGKL*QSWLGR
Trigger: TCGCCCCAGCCAGGACTGCCATAACTTGCCTGGCTC...CCACTCTGGACAGCGCCAGGAGGCCCTGGGTTCCATTCCTAACTCTGCCTCAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307998.11
ENST00000528176.5
ENST00000531972.5
CDS-3UTR CCA 90 bp TTTGAGGCAGAGTTAGGAATGGAACCCAGGGCCTCCTGGCGCTGTCCAGAGTGGCTTGGCAGAGGCGTGTaGCCAGCAGCTGGTAACCCT +
Preference number: 4 (lower is better)
Translates to: FEAELGMEPRASWRCPEWLGRGV*PAAGNP
Trigger: AGGGTTACCAGCTGCTGGCCACACGCCTCTGCCAAG...CCACTCTGGACAGCGCCAGGAGGCCCTGGGTTCCATTCCTAACTCTGCCTCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307998.11
ENST00000528176.5
ENST00000531972.5
CDS-3UTR CCA 90 bp CTGGAGTCCGCCCTCCTCGTTACCTCCTCTCCTCTCGGGGTGACTGAAGCTCGTAAGTTGACACAGGTTTaGGCCTCGGAGCACTGGTGC +
Preference number: 4 (lower is better)
Translates to: LESALLVTSSPLGVTEARKLTQV*ASEHWC
Trigger: GCACCAGTGCTCCGAGGCCCAAACCTGTGTCAACTT...ACGAGCTTCAGTCACCCCGAGAGGAGAGGAGGTAACGAGGAGGGCGGACTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307998.11
ENST00000531972.5
CDS-3UTR CCA 90 bp TCCGCCCTCCTCGTTACCTCCTCTCCTCTCGGGGTGACTGAAGCTCGTGGTGCATGGCGCTGTCCAGAGTaGAGTTTCTTAGGACCCCTG +
Preference number: 4 (lower is better)
Translates to: SALLVTSSPLGVTEARGAWRCPE*SFLGPL
Trigger: CAGGGGTCCTAAGAAACTCCACTCTGGACAGCGCCA...TGCACCACGAGCTTCAGTCACCCCGAGAGGAGAGGAGGTAACGAGGAGGGCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307998.11
ENST00000524408.1
ENST00000526911.1
ENST00000527277.5
ENST00000531972.5
CDS-3UTR CCA 90 bp TTAGGAATGGAACCCAGGGCCTCCTGGCGCTGTCCAGAGTGGAGTTTCTTAGGACCCAGCTCCTGTCAATaGGGGCCCCTGGGCAACAGG +
Preference number: 4 (lower is better)
Translates to: LGMEPRASWRCPEWSFLGPSSCQ*GPLGNR
Trigger: CCTGTTGCCCAGGGGCCCCCATTGACAGGAGCTGGG...TCCTAAGAAACTCCACTCTGGACAGCGCCAGGAGGCCCTGGGTTCCATTCCTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524408.1
CDS-3UTR CCA 90 bp TCCTGGCGCTGTCCAGAGTGGAGTTTCTTAGGACCCCTGCAAGCCAGCCAAGTCGTCAATGGGGGCCCCTaGGCCTTTCTCATTCTGCCC +
Preference number: 4 (lower is better)
Translates to: SWRCPEWSFLGPLQASQVVNGGP*AFLILP
Trigger: GGGCAGAATGAGAAAGGCCCAGGGGCCCCCATTGAC...GACTTGGCTGGCTTGCAGGGGTCCTAAGAAACTCCACTCTGGACAGCGCCAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000531972.5
CDS-3UTR TCA 90 bp GCACTGATAGGAGCCAGGCAAGTTATGGCAGTCCTGGCTGGGGCGACAGTCGTGAGCCCCCGTAGTGGTTaGTGCACTTCATTTCCCCCT +
Preference number: 4 (lower is better)
Translates to: ALIGARQVMAVLAGATVVSPRSG*CTSFPP
Trigger: AGGGGGAAATGAAGTGCATCAACCACTACGGGGGCT...CACGACTGTCGCCCCAGCCAGGACTGCCATAACTTGCCTGGCTCCTATCAGTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000530850.1
ENST00000533347.5
CDS-3UTR TCA 90 bp CGTCTATGTCCACACACTCGGGCCCGATCTTGCGGTAACCATCAGGGCAGGTGCAGCCCCCGTAGTGGTTaGTGCACTTCATTTCCCCCT +
Preference number: 4 (lower is better)
Translates to: RLCPHTRARSCGNHQGRCSPRSG*CTSFPP
Trigger: AGGGGGAAATGAAGTGCATCAACCACTACGGGGGCT...GCACCTGCCCTGATGGTTACCGCAAGATCGGGCCCGAGTGTGTGGACATAGACG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000530850.1
ENST00000533347.5
CDS-3UTR TCA 90 bp TTTGAGGCAGAGTTAGGAATGGAACCCAGGGCCTCCTGGCGCTGTCCAGAGTGGAGGTCCCATAGGAGTTaGAGCAGCGCTGCTCGCATG +
Preference number: 4 (lower is better)
Translates to: FEAELGMEPRASWRCPEWRSHRS*SSAARM
Trigger: CATGCGAGCAGCGCTGCTTCAACTCCTATGGGACCT...CCACTCTGGACAGCGCCAGGAGGCCCTGGGTTCCATTCCTAACTCTGCCTCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307998.11
ENST00000528176.5
ENST00000531972.5
CDS-3UTR TCA 90 bp ACACTCGTTCACATCAACACAGGAGCGGTTGTTAGGCCCCAGCTGGAAGCCCGGAGGTCCCATAGGAGTTaGAGCAGCGCTGCTCGCATG +
Preference number: 4 (lower is better)
Translates to: TLVHINTGAVVRPQLEARRSHRS*SSAARM
Trigger: CATGCGAGCAGCGCTGCTTCAACTCCTATGGGACCT...CCGGGCTTCCAGCTGGGGCCTAACAACCGCTCCTGTGTTGATGTGAACGAGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533347.5
CDS-3UTR TCA 90 bp GCGCTGTCCAGAGTGGAGTTTCTTAGGACCCCTGCAAGCCAGCCAAGTCCAAATCCTCTCCTCTCGGGGTaGCTGAAGCTCGTGGTGCAG +
Preference number: 4 (lower is better)
Translates to: ALSRVEFLRTPASQPSPNPLLSG*LKLVVQ
Trigger: CTGCACCACGAGCTTCAGTCACCCCGAGAGGAGAGG...ATTTGGACTTGGCTGGCTTGCAGGGGTCCTAAGAAACTCCACTCTGGACAGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307998.11
ENST00000524408.1
ENST00000526911.1
ENST00000527277.5
ENST00000531972.5
CDS-3UTR GCA 90 bp CGCTGTCCAGAGTGGAGTTTCTTAGGACCCCTGCAAGCCAGCCAAGTCCAAATCGAGTTGAAGCAGCGCTaGTCGCATGGGGCCCCCATG +
Preference number: 4 (lower is better)
Translates to: RCPEWSFLGPLQASQVQIELKQR*SHGAPM
Trigger: CATGGGGGCCCCATGCGAGCAGCGCTGCTTCAACTC...GATTTGGACTTGGCTGGCTTGCAGGGGTCCTAAGAAACTCCACTCTGGACAGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307998.11
ENST00000531972.5
CDS-3UTR CCA 90 bp TCCAGAGTGGAGTTTCTTAGGACCCCTGCAAGCCAGCCAAGTCCAAATCTCTGGCTGGTGGGCAGGGGTTaGGGTGTTGAGCGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: SRVEFLRTPASQPSPNLWLVGRG*GVEREA
Trigger: TGCCTCCCGCTCAACACCCCAACCCCTGCCCACCAG...CCAGAGATTTGGACTTGGCTGGCTTGCAGGGGTCCTAAGAAACTCCACTCTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307998.11
ENST00000531972.5
CDS-3UTR CCA 90 bp CTCGTCTATGTCCACACACTCGGGCCCGATCTTGCGGTAACCATCAGGGCAGGTAAGTTATGGCAGTCCTaGCTGGGGCGACAGTCGTGC +
Preference number: 4 (lower is better)
Translates to: LVYVHTLGPDLAVTIRAGKLWQS*LGRQSC
Trigger: GCACGACTGTCGCCCCAGCCAGGACTGCCATAACTT...ACCTGCCCTGATGGTTACCGCAAGATCGGGCCCGAGTGTGTGGACATAGACGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530850.1
ENST00000533347.5
CDS-3UTR CCA 90 bp GAGGCAGAGTTAGGAATGGAACCCAGGGCCTCCTGGCGCTGTCCAGAGTGGAGTCACTCATCAATGTCTTaGCAGAGGCGTGTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: EAELGMEPRASWRCPEWSHSSMS*QRRVAS
Trigger: GCTGGCCACACGCCTCTGCCAAGACATTGATGAGTG...ACTCCACTCTGGACAGCGCCAGGAGGCCCTGGGTTCCATTCCTAACTCTGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307998.11
ENST00000528176.5
ENST00000531972.5
CDS-3UTR CCA 90 bp GAGGCAGAGTTAGGAATGGAACCCAGGGCCTCCTGGCGCTGTCCAGAGTGGAGTAAGTTGACACAGGTTTaGGCCTCGGAGCACTGGTGC +
Preference number: 4 (lower is better)
Translates to: EAELGMEPRASWRCPEWSKLTQV*ASEHWC
Trigger: GCACCAGTGCTCCGAGGCCCAAACCTGTGTCAACTT...ACTCCACTCTGGACAGCGCCAGGAGGCCCTGGGTTCCATTCCTAACTCTGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307998.11
ENST00000528176.5
ENST00000531645.5
ENST00000531972.5
CDS-3UTR CCA 90 bp GAGGCAGAGTTAGGAATGGAACCCAGGGCCTCCTGGCGCTGTCCAGAGTGGAGTTGGCGCTGTCCAGAGTaGAGTTTCTTAGGACCCCTG +
Preference number: 4 (lower is better)
Translates to: EAELGMEPRASWRCPEWSWRCPE*SFLGPL
Trigger: CAGGGGTCCTAAGAAACTCCACTCTGGACAGCGCCA...ACTCCACTCTGGACAGCGCCAGGAGGCCCTGGGTTCCATTCCTAACTCTGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307998.11
ENST00000524408.1
ENST00000526911.1
ENST00000527277.5
ENST00000528176.5
ENST00000531645.5
ENST00000531972.5
CDS-3UTR TCA 90 bp TTCACATCAACACAGGAGCGGTTGTTAGGCCCCAGCTGGAAGCCCGGCTCGCACGGCTCTTCAGAATCCTaGGGAGAAGCTGATCCCAAG +
Preference number: 4 (lower is better)
Translates to: FTSTQERLLGPSWKPGSHGSSES*GEADPK
Trigger: CTTGGGATCAGCTTCTCCTCAGGATTCTGAAGAGCC...GTGCGAGCCGGGCTTCCAGCTGGGGCCTAACAACCGCTCCTGTGTTGATGTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533347.5
CDS-3UTR TCA 90 bp CCTGCAAGCCAGCCAAGTCCAAATCTCTGGGCCGGGGCCTGGAGTCCGCCCTCCTCCAAATGTACAGTTTaGGGCAGAGTTAGGAATGGA +
Preference number: 4 (lower is better)
Translates to: PASQPSPNLWAGAWSPPSSKCTV*GRVRNG
Trigger: TCCATTCCTAACTCTGCCTCAAACTGTACATTTGGA...GGAGGGCGGACTCCAGGCCCCGGCCCAGAGATTTGGACTTGGCTGGCTTGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307998.11
ENST00000524408.1
ENST00000526911.1
ENST00000527277.5
ENST00000531972.5
CDS-3UTR GCA 90 bp TATCCAAATGTACAGTTTGAGGCAGAGTTAGGAATGGAACCCAGGGCCTCCTGGCTGGGGCGACAGTCGTaGAGGGCCTGGGCACACTCG +
Preference number: 4 (lower is better)
Translates to: YPNVQFEAELGMEPRASWLGRQS*RAWAHS
Trigger: CGAGTGTGCCCAGGCCCTGCACGACTGTCGCCCCAG...CCAGGAGGCCCTGGGTTCCATTCCTAACTCTGCCTCAAACTGTACATTTGGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307998.11
ENST00000528176.5
ENST00000531972.5
CDS-3UTR GCA 90 bp ACTCGTCTATGTCCACACACTCGGGCCCGATCTTGCGGTAACCATCAGGGCAGGAACCATCAGGGCAGGTaGACTGATAGGAGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: TRLCPHTRARSCGNHQGRNHQGR*TDRSQA
Trigger: TGCCTGGCTCCTATCAGTGCACCTGCCCTGATGGTT...CCTGCCCTGATGGTTACCGCAAGATCGGGCCCGAGTGTGTGGACATAGACGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530850.1
ENST00000533347.5
CDS-3UTR CCA 90 bp ACTAGGGCTTATCCAAATGTACAGTTTGAGGCAGAGTTAGGAATGGAACCCAGGAGCGGGAGGCACTGGTaGCGGGGGTCCCTCGCCGTG +
Preference number: 4 (lower is better)
Translates to: TRAYPNVQFEAELGMEPRSGRHW*RGSLAV
Trigger: CACGGCGAGGGACCCCCGCCACCAGTGCCTCCCGCT...CCTGGGTTCCATTCCTAACTCTGCCTCAAACTGTACATTTGGATAAGCCCTAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307998.11
ENST00000528176.5
ENST00000531972.5
CDS-3UTR CCA 90 bp TCCAGAGTGGAGTTTCTTAGGACCCCTGCAAGCCAGCCAAGTCCAAATCTCTGGTATGGCAGTCCTGGCTaGGGCGACAGTCGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: SRVEFLRTPASQPSPNLWYGSPG*GDSRAG
Trigger: CCCTGCACGACTGTCGCCCCAGCCAGGACTGCCATA...CCAGAGATTTGGACTTGGCTGGCTTGCAGGGGTCCTAAGAAACTCCACTCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307998.11
ENST00000531972.5
CDS-3UTR CCA 90 bp AGGGCTTATCCAAATGTACAGTTTGAGGCAGAGTTAGGAATGGAACCCAGGGCCAAGCCCGGCTCGCACTaGCAGCGGAAGGAGCCAGGC +
Preference number: 4 (lower is better)
Translates to: RAYPNVQFEAELGMEPRAKPGSH*QRKEPG
Trigger: GCCTGGCTCCTTCCGCTGCCAGTGCGAGCCGGGCTT...GGCCCTGGGTTCCATTCCTAACTCTGCCTCAAACTGTACATTTGGATAAGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307998.11
ENST00000528176.5
ENST00000531972.5
CDS-3UTR CCA 90 bp GCCAAGTCCAAATCTCTGGGCCGGGGCCTGGAGTCCGCCCTCCTCGTTACCTCCACTGACAGAGGTAGCTaGAGTAGCTACACTCATCAA +
Preference number: 4 (lower is better)
Translates to: AKSKSLGRGLESALLVTSTDRGS*SSYTHQ
Trigger: TTGATGAGTGTAGCTACTCCAGCTACCTCTGTCAGT...GGAGGTAACGAGGAGGGCGGACTCCAGGCCCCGGCCCAGAGATTTGGACTTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307998.11
ENST00000531972.5
CDS-3UTR CCA 90 bp CGCTGTCCAGAGTGGAGTTTCTTAGGACCCCTGCAAGCCAGCCAAGTCCAAATCCTTGGCAGAGGCGTGTaGCCAGCAGCTGGTAACCCT +
Preference number: 4 (lower is better)
Translates to: RCPEWSFLGPLQASQVQILGRGV*PAAGNP
Trigger: AGGGTTACCAGCTGCTGGCCACACGCCTCTGCCAAG...GATTTGGACTTGGCTGGCTTGCAGGGGTCCTAAGAAACTCCACTCTGGACAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307998.11
ENST00000531972.5
CDS-3UTR CCA 90 bp AATGTACAGTTTGAGGCAGAGTTAGGAATGGAACCCAGGGCCTCCTGGCGCTGTTGGGCCTCGGAGCACTaGTGCGCACCAGACTCACAC +
Preference number: 4 (lower is better)
Translates to: NVQFEAELGMEPRASWRCWASEH*CAPDSH
Trigger: GTGTGAGTCTGGTGCGCACCAGTGCTCCGAGGCCCA...ACAGCGCCAGGAGGCCCTGGGTTCCATTCCTAACTCTGCCTCAAACTGTACATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307998.11
ENST00000528176.5
ENST00000531645.5
ENST00000531972.5
CDS-3UTR CCA 90 bp TCCAGAGTGGAGTTTCTTAGGACCCCTGCAAGCCAGCCAAGTCCAAATCTCTGGTGGGCCTCGGAGCACTaGTGCGCACCAGACTCACAC +
Preference number: 4 (lower is better)
Translates to: SRVEFLRTPASQPSPNLWWASEH*CAPDSH
Trigger: GTGTGAGTCTGGTGCGCACCAGTGCTCCGAGGCCCA...CCAGAGATTTGGACTTGGCTGGCTTGCAGGGGTCCTAAGAAACTCCACTCTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307998.11
ENST00000531972.5
CDS-3UTR CCA 90 bp TCCTGGCGCTGTCCAGAGTGGAGTTTCTTAGGACCCCTGCAAGCCAGCCAAGTCTGGCGCTGTCCAGAGTaGAGTTTCTTAGGACCCCTG +
Preference number: 4 (lower is better)
Translates to: SWRCPEWSFLGPLQASQVWRCPE*SFLGPL
Trigger: CAGGGGTCCTAAGAAACTCCACTCTGGACAGCGCCA...GACTTGGCTGGCTTGCAGGGGTCCTAAGAAACTCCACTCTGGACAGCGCCAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307998.11
ENST00000524408.1
ENST00000526911.1
ENST00000527277.5
ENST00000531972.5
CDS-3UTR CCA 90 bp GGCAGAGTTAGGAATGGAACCCAGGGCCTCCTGGCGCTGTCCAGAGTGGAGTTTTGGCGCTGTCCAGAGTaGAGTTTCTTAGGACCCCTG +
Preference number: 4 (lower is better)
Translates to: GRVRNGTQGLLALSRVEFWRCPE*SFLGPL
Trigger: CAGGGGTCCTAAGAAACTCCACTCTGGACAGCGCCA...AAACTCCACTCTGGACAGCGCCAGGAGGCCCTGGGTTCCATTCCTAACTCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000307998.11
ENST00000524408.1
ENST00000526911.1
ENST00000527277.5
ENST00000528176.5
ENST00000531645.5
ENST00000531972.5
CDS-3UTR TCA 90 bp AGGAATGGAACCCAGGGCCTCCTGGCGCTGTCCAGAGTGGAGTTTCTTAGGACCGGCTCTTCAGAATCCTaGGGAGAAGCTGATCCCAAG +
Preference number: 4 (lower is better)
Translates to: RNGTQGLLALSRVEFLRTGSSES*GEADPK
Trigger: CTTGGGATCAGCTTCTCCTCAGGATTCTGAAGAGCC...GGTCCTAAGAAACTCCACTCTGGACAGCGCCAGGAGGCCCTGGGTTCCATTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307998.11
ENST00000531972.5
CDS-3UTR TCA 90 bp TTTGAGGCAGAGTTAGGAATGGAACCCAGGGCCTCCTGGCGCTGTCCAGAGTGGGGCTCTTCAGAATCCTaGGGAGAAGCTGATCCCAAG +
Preference number: 4 (lower is better)
Translates to: FEAELGMEPRASWRCPEWGSSES*GEADPK
Trigger: CTTGGGATCAGCTTCTCCTCAGGATTCTGAAGAGCC...CCACTCTGGACAGCGCCAGGAGGCCCTGGGTTCCATTCCTAACTCTGCCTCAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307998.11
ENST00000528176.5
ENST00000531972.5
CDS-3UTR TCA 90 bp AGCGGAGCGGGGCAGGCACAAGTAGCCCCCGTAGTGGTTGATGCACTTCATTTCGGCTCTTCAGAATCCTaGGGAGAAGCTGATCCCAAG +
Preference number: 4 (lower is better)
Translates to: SGAGQAQVAPVVVDALHFGSSES*GEADPK
Trigger: CTTGGGATCAGCTTCTCCTCAGGATTCTGAAGAGCC...GAAATGAAGTGCATCAACCACTACGGGGGCTACTTGTGCCTGCCCCGCTCCGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000530850.1
ENST00000533347.5
CDS-3UTR TCA 90 bp TCCAGAGTGGAGTTTCTTAGGACCCCTGCAAGCCAGCCAAGTCCAAATCTCTGGAGCCCCCATGGAAGTTaGCACAGGTTTGGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: SRVEFLRTPASQPSPNLWSPHGS*HRFGPR
Trigger: CCGAGGCCCAAACCTGTGTCAACTTCCATGGGGGCT...CCAGAGATTTGGACTTGGCTGGCTTGCAGGGGTCCTAAGAAACTCCACTCTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307998.11
ENST00000531972.5
CDS-3UTR TCA 90 bp GCTTATCCAAATGTACAGTTTGAGGCAGAGTTAGGAATGGAACCCAGGGCCTCCAGGCTTCCTGCAGTGTaGCCCGCCCACCTCAGCCAC +
Preference number: 4 (lower is better)
Translates to: AYPNVQFEAELGMEPRASRLPAV*PAHLSH
Trigger: GTGGCTGAGGTGGGCGGGTCACACTGCAGGAAGCCT...GGAGGCCCTGGGTTCCATTCCTAACTCTGCCTCAAACTGTACATTTGGATAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000307998.11
CDS-3UTR TCA 90 bp CTGTCCAGAGTGGAGTTTCTTAGGACCCCTGCAAGCCAGCCAAGTCCAAATCTCTCCTCTCGGGGTGACTaGAGCTCGTGGTGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: LSRVEFLRTPASQPSPNLSSRGD*SSWCRA
Trigger: AGCTCTGCACCACGAGCTTCAGTCACCCCGAGAGGA...GAGATTTGGACTTGGCTGGCTTGCAGGGGTCCTAAGAAACTCCACTCTGGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307998.11
ENST00000524408.1
ENST00000526911.1
ENST00000527277.5
ENST00000531972.5
CDS-3UTR TCA 90 bp GCCAGCCAAGTCCAAATCTCTGGGCCGGGGCCTGGAGTCCGCCCTCCTCGTTACTCCAAATGTACAGTTTaGGGCAGAGTTAGGAATGGA +
Preference number: 4 (lower is better)
Translates to: ASQVQISGPGPGVRPPRYSKCTV*GRVRNG
Trigger: TCCATTCCTAACTCTGCCTCAAACTGTACATTTGGA...GTAACGAGGAGGGCGGACTCCAGGCCCCGGCCCAGAGATTTGGACTTGGCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307998.11
ENST00000524408.1
ENST00000526911.1
ENST00000527277.5
ENST00000531972.5
CDS-3UTR GCA 90 bp GAACCCAGGGCCTCCTGGCGCTGTCCAGAGTGGAGTTTCTTAGGACCCCTGCAATTGCCTTTCTCATTCTaGCCCTCACAACAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: EPRASWRCPEWSFLGPLQLPFSF*PSQQAP
Trigger: AGGAGCCTGTTGTGAGGGGCAGAATGAGAAAGGCAA...TTGCAGGGGTCCTAAGAAACTCCACTCTGGACAGCGCCAGGAGGCCCTGGGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307998.11
ENST00000527277.5
CDS-3UTR CCA 90 bp AGGGCTTATCCAAATGTACAGTTTGAGGCAGAGTTAGGAATGGAACCCAGGGCCCTGGTGGGCAGGGGTTaGGGTGTTGAGCGGGAGGCA +
Preference number: 4 (lower is better)
Translates to: RAYPNVQFEAELGMEPRALVGRG*GVEREA
Trigger: TGCCTCCCGCTCAACACCCCAACCCCTGCCCACCAG...GGCCCTGGGTTCCATTCCTAACTCTGCCTCAAACTGTACATTTGGATAAGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307998.11
ENST00000528176.5
ENST00000531972.5
CDS-3UTR CCA 90 bp GCTTATCCAAATGTACAGTTTGAGGCAGAGTTAGGAATGGAACCCAGGGCCTCCGCTCCACGCAGCGGTTaGTGTCCACGCAGCGGTAGC +
Preference number: 4 (lower is better)
Translates to: AYPNVQFEAELGMEPRASAPRSG*CPRSGS
Trigger: GCTACCGCTGCGTGGACACCAACCGCTGCGTGGAGC...GGAGGCCCTGGGTTCCATTCCTAACTCTGCCTCAAACTGTACATTTGGATAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307998.11
ENST00000528176.5
ENST00000531645.5
ENST00000531972.5
CDS-3UTR CCA 90 bp TATCCAAATGTACAGTTTGAGGCAGAGTTAGGAATGGAACCCAGGGCCTCCTGGGCTCCACGCAGCGGTTaGTGTCCACGCAGCGGTAGC +
Preference number: 4 (lower is better)
Translates to: YPNVQFEAELGMEPRASWAPRSG*CPRSGS
Trigger: GCTACCGCTGCGTGGACACCAACCGCTGCGTGGAGC...CCAGGAGGCCCTGGGTTCCATTCCTAACTCTGCCTCAAACTGTACATTTGGATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307998.11
ENST00000528176.5
ENST00000531645.5
ENST00000531972.5
CDS-3UTR CCA 90 bp AATGTACAGTTTGAGGCAGAGTTAGGAATGGAACCCAGGGCCTCCTGGCGCTGTCTCGACATAGAGGGTTaGAGGCCGGGCAGAGACAGC +
Preference number: 4 (lower is better)
Translates to: NVQFEAELGMEPRASWRCLDIEG*RPGRDS
Trigger: GCTGTCTCTGCCCGGCCTCCAACCCTCTATGTCGAG...ACAGCGCCAGGAGGCCCTGGGTTCCATTCCTAACTCTGCCTCAAACTGTACATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307998.11
ENST00000528176.5
ENST00000531645.5
ENST00000531972.5
CDS-3UTR CCA 90 bp CTGTCCAGAGTGGAGTTTCTTAGGACCCCTGCAAGCCAGCCAAGTCCAAATCTCCTCGACATAGAGGGTTaGAGGCCGGGCAGAGACAGC +
Preference number: 4 (lower is better)
Translates to: LSRVEFLRTPASQPSPNLLDIEG*RPGRDS
Trigger: GCTGTCTCTGCCCGGCCTCCAACCCTCTATGTCGAG...GAGATTTGGACTTGGCTGGCTTGCAGGGGTCCTAAGAAACTCCACTCTGGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307998.11
ENST00000531972.5
CDS-3UTR TCA 90 bp AATGTACAGTTTGAGGCAGAGTTAGGAATGGAACCCAGGGCCTCCTGGCGCTGTAACGGCCTGGCTCGTTaGTGCAGCGGTACTGACAGA +
Preference number: 4 (lower is better)
Translates to: NVQFEAELGMEPRASWRCNGLAR*CSGTDR
Trigger: TCTGTCAGTACCGCTGCATCAACGAGCCAGGCCGTT...ACAGCGCCAGGAGGCCCTGGGTTCCATTCCTAACTCTGCCTCAAACTGTACATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307998.11
ENST00000528176.5
ENST00000531972.5
CDS-3UTR TCA 90 bp AGGGCTTATCCAAATGTACAGTTTGAGGCAGAGTTAGGAATGGAACCCAGGGCCCGCTCCGCTCCGAGGTaGTGGTCATGTAGCGGTGCA +
Preference number: 4 (lower is better)
Translates to: RAYPNVQFEAELGMEPRARSAPR*WSCSGA
Trigger: TGCACCGCTACATGACCATCACCTCGGAGCGGAGCG...GGCCCTGGGTTCCATTCCTAACTCTGCCTCAAACTGTACATTTGGATAAGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000307998.11
ENST00000526911.1
ENST00000528176.5
ENST00000531645.5
ENST00000531972.5
CDS-3UTR GCA 90 bp TATCCAAATGTACAGTTTGAGGCAGAGTTAGGAATGGAACCCAGGGCCTCCTGGGAGTTGAAGCAGCGCTaGTCGCATGGGGCCCCCATG +
Preference number: 4 (lower is better)
Translates to: YPNVQFEAELGMEPRASWELKQR*SHGAPM
Trigger: CATGGGGGCCCCATGCGAGCAGCGCTGCTTCAACTC...CCAGGAGGCCCTGGGTTCCATTCCTAACTCTGCCTCAAACTGTACATTTGGATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307998.11
ENST00000528176.5
ENST00000531972.5
CDS-3UTR GCA 90 bp CTGGAGTCCGCCCTCCTCGTTACCTCCTCTCCTCTCGGGGTGACTGAAGCTCGTACTCATCAATATCACTaGAGGAGAAGCCATCCCGAT +
Preference number: 4 (lower is better)
Translates to: LESALLVTSSPLGVTEARTHQYH*RRSHPD
Trigger: ATCGGGATGGCTTCTCCTGCAGTGATATTGATGAGT...ACGAGCTTCAGTCACCCCGAGAGGAGAGGAGGTAACGAGGAGGGCGGACTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307998.11
ENST00000531972.5
CDS-3UTR GCA 90 bp CTCCTGGCGCTGTCCAGAGTGGAGTTTCTTAGGACCCCTGCAAGCCAGCCAAGTTTGCCTTTCTCATTCTaGCCCTCACAACAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: LLALSRVEFLRTPASQPSLPFSF*PSQQAP
Trigger: AGGAGCCTGTTGTGAGGGGCAGAATGAGAAAGGCAA...ACTTGGCTGGCTTGCAGGGGTCCTAAGAAACTCCACTCTGGACAGCGCCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307998.11
ENST00000527277.5
CDS-3UTR GCA 90 bp AGAGTTAGGAATGGAACCCAGGGCCTCCTGGCGCTGTCCAGAGTGGAGTTTCTTGGGCCTTTCTCATTCTaGCCCTCACAACAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: RVRNGTQGLLALSRVEFLGPFSF*PSQQAP
Trigger: AGGAGCCTGTTGTGAGGGGCAGAATGAGAAAGGCCC...AAGAAACTCCACTCTGGACAGCGCCAGGAGGCCCTGGGTTCCATTCCTAACTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531972.5
CDS-3UTR CCA 90 bp CTGTCCAGAGTGGAGTTTCTTAGGACCCCTGCAAGCCAGCCAAGTCCAAATCTCAAGTTATGGCAGTCCTaGCTGGGGCGACAGTCGTGC +
Preference number: 4 (lower is better)
Translates to: LSRVEFLRTPASQPSPNLKLWQS*LGRQSC
Trigger: GCACGACTGTCGCCCCAGCCAGGACTGCCATAACTT...GAGATTTGGACTTGGCTGGCTTGCAGGGGTCCTAAGAAACTCCACTCTGGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307998.11
ENST00000531972.5
CDS-3UTR CCA 90 bp TTAGGAATGGAACCCAGGGCCTCCTGGCGCTGTCCAGAGTGGAGTTTCTTAGGACACTCATCAATGTCTTaGCAGAGGCGTGTGGCCAGC +
Preference number: 4 (lower is better)
Translates to: LGMEPRASWRCPEWSFLGHSSMS*QRRVAS
Trigger: GCTGGCCACACGCCTCTGCCAAGACATTGATGAGTG...TCCTAAGAAACTCCACTCTGGACAGCGCCAGGAGGCCCTGGGTTCCATTCCTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307998.11
ENST00000531972.5
CDS-3UTR CCA 90 bp TATCCAAATGTACAGTTTGAGGCAGAGTTAGGAATGGAACCCAGGGCCTCCTGGCCAAGTCCAAATCTCTaGGCCGGGGCCTGGAGTCCG +
Preference number: 4 (lower is better)
Translates to: YPNVQFEAELGMEPRASWPSPNL*AGAWSP
Trigger: CGGACTCCAGGCCCCGGCCCAGAGATTTGGACTTGG...CCAGGAGGCCCTGGGTTCCATTCCTAACTCTGCCTCAAACTGTACATTTGGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307998.11
ENST00000524408.1
ENST00000526911.1
ENST00000527277.5
ENST00000528176.5
ENST00000531645.5
ENST00000531972.5
CDS-3UTR CCA 90 bp CGCTGTCCAGAGTGGAGTTTCTTAGGACCCCTGCAAGCCAGCCAAGTCCAAATCTGGCGCTGTCCAGAGTaGAGTTTCTTAGGACCCCTG +
Preference number: 4 (lower is better)
Translates to: RCPEWSFLGPLQASQVQIWRCPE*SFLGPL
Trigger: CAGGGGTCCTAAGAAACTCCACTCTGGACAGCGCCA...GATTTGGACTTGGCTGGCTTGCAGGGGTCCTAAGAAACTCCACTCTGGACAGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307998.11
ENST00000524408.1
ENST00000526911.1
ENST00000527277.5
ENST00000531972.5
CDS-3UTR CCA 90 bp GCGCTGTCCAGAGTGGAGTTTCTTAGGACCCCTGCAAGCCAGCCAAGTCCAAATTGGCGCTGTCCAGAGTaGAGTTTCTTAGGACCCCTG +
Preference number: 4 (lower is better)
Translates to: ALSRVEFLRTPASQPSPNWRCPE*SFLGPL
Trigger: CAGGGGTCCTAAGAAACTCCACTCTGGACAGCGCCA...ATTTGGACTTGGCTGGCTTGCAGGGGTCCTAAGAAACTCCACTCTGGACAGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000307998.11
ENST00000524408.1
ENST00000526911.1
ENST00000527277.5
ENST00000531972.5
CDS-3UTR TCA 90 bp AGGGCTTATCCAAATGTACAGTTTGAGGCAGAGTTAGGAATGGAACCCAGGGCCAGCCCCCATGGAAGTTaGCACAGGTTTGGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: RAYPNVQFEAELGMEPRASPHGS*HRFGPR
Trigger: CCGAGGCCCAAACCTGTGTCAACTTCCATGGGGGCT...GGCCCTGGGTTCCATTCCTAACTCTGCCTCAAACTGTACATTTGGATAAGCCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000307998.11
ENST00000528176.5
ENST00000531645.5
ENST00000531972.5
CDS-3UTR TCA 90 bp AGGGCTTATCCAAATGTACAGTTTGAGGCAGAGTTAGGAATGGAACCCAGGGCCTCCTCTCGGGGTGACTaGAGCTCGTGGTGCAGAGCT +
Preference number: 4 (lower is better)
Translates to: RAYPNVQFEAELGMEPRASSRGD*SSWCRA
Trigger: AGCTCTGCACCACGAGCTTCAGTCACCCCGAGAGGA...GGCCCTGGGTTCCATTCCTAACTCTGCCTCAAACTGTACATTTGGATAAGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307998.11
ENST00000524408.1
ENST00000526911.1
ENST00000527277.5
ENST00000528176.5
ENST00000531645.5
ENST00000531972.5
CDS-3UTR TCA 90 bp TCGTGGTGCAGAGCTCCCAGCTCCTGTCAATGGGGGCCCCTGGGCCTTTCTCATTCCAAATGTACAGTTTaGGGCAGAGTTAGGAATGGA +
Preference number: 4 (lower is better)
Translates to: SWCRAPSSCQWGPLGLSHSKCTV*GRVRNG
Trigger: TCCATTCCTAACTCTGCCTCAAACTGTACATTTGGA...ATGAGAAAGGCCCAGGGGCCCCCATTGACAGGAGCTGGGAGCTCTGCACCACGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000531972.5
CDS-3UTR GCA 90 bp TATCCAAATGTACAGTTTGAGGCAGAGTTAGGAATGGAACCCAGGGCCTCCTGGTTGACATCCCGGCAGTaGTGGCTGTCTGGGTCCCAC +
Preference number: 4 (lower is better)
Translates to: YPNVQFEAELGMEPRASWLTSRQ*WLSGSH
Trigger: GTGGGACCCAGACAGCCAGCACTGCCGGGATGTCAA...CCAGGAGGCCCTGGGTTCCATTCCTAACTCTGCCTCAAACTGTACATTTGGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307998.11
ENST00000528176.5
ENST00000531972.5
CDS-3UTR GCA 90 bp AATGTACAGTTTGAGGCAGAGTTAGGAATGGAACCCAGGGCCTCCTGGCGCTGTAACCATCAGGGCAGGTaGACTGATAGGAGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: NVQFEAELGMEPRASWRCNHQGR*TDRSQA
Trigger: TGCCTGGCTCCTATCAGTGCACCTGCCCTGATGGTT...ACAGCGCCAGGAGGCCCTGGGTTCCATTCCTAACTCTGCCTCAAACTGTACATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307998.11
ENST00000528176.5
ENST00000531972.5
CDS-3UTR GCA 90 bp GAGGCAGAGTTAGGAATGGAACCCAGGGCCTCCTGGCGCTGTCCAGAGTGGAGTACTCATCAATATCACTaGAGGAGAAGCCATCCCGAT +
Preference number: 4 (lower is better)
Translates to: EAELGMEPRASWRCPEWSTHQYH*RRSHPD
Trigger: ATCGGGATGGCTTCTCCTGCAGTGATATTGATGAGT...ACTCCACTCTGGACAGCGCCAGGAGGCCCTGGGTTCCATTCCTAACTCTGCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307998.11
ENST00000528176.5
ENST00000531972.5
CDS-3UTR GCA 90 bp TTTGAGGCAGAGTTAGGAATGGAACCCAGGGCCTCCTGGCGCTGTCCAGAGTGGACAATGGATGAAGGCTaGTCTCGACATAGAGGGTTG +
Preference number: 4 (lower is better)
Translates to: FEAELGMEPRASWRCPEWTMDEG*SRHRGL
Trigger: CAACCCTCTATGTCGAGAGCAGCCTTCATCCATTGT...CCACTCTGGACAGCGCCAGGAGGCCCTGGGTTCCATTCCTAACTCTGCCTCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307998.11
ENST00000528176.5
ENST00000531645.5
ENST00000531972.5
CDS-3UTR GCA 90 bp GCAGAGTTAGGAATGGAACCCAGGGCCTCCTGGCGCTGTCCAGAGTGGAGTTTCACAATGGATGAAGGCTaGTCTCGACATAGAGGGTTG +
Preference number: 4 (lower is better)
Translates to: AELGMEPRASWRCPEWSFTMDEG*SRHRGL
Trigger: CAACCCTCTATGTCGAGAGCAGCCTTCATCCATTGT...GAAACTCCACTCTGGACAGCGCCAGGAGGCCCTGGGTTCCATTCCTAACTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307998.11
ENST00000528176.5
ENST00000531645.5
ENST00000531972.5
CDS-3UTR CCA 90 bp GCTTATCCAAATGTACAGTTTGAGGCAGAGTTAGGAATGGAACCCAGGGCCTCCGAGCCAGGCAAGTTATaGCAGTCCTGGCTGGGGCGA +
Preference number: 4 (lower is better)
Translates to: AYPNVQFEAELGMEPRASEPGKL*QSWLGR
Trigger: TCGCCCCAGCCAGGACTGCCATAACTTGCCTGGCTC...GGAGGCCCTGGGTTCCATTCCTAACTCTGCCTCAAACTGTACATTTGGATAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307998.11
ENST00000528176.5
ENST00000531972.5
CDS-3UTR CCA 90 bp AGGGCTTATCCAAATGTACAGTTTGAGGCAGAGTTAGGAATGGAACCCAGGGCCCTCGACATAGAGGGTTaGAGGCCGGGCAGAGACAGC +
Preference number: 4 (lower is better)
Translates to: RAYPNVQFEAELGMEPRALDIEG*RPGRDS
Trigger: GCTGTCTCTGCCCGGCCTCCAACCCTCTATGTCGAG...GGCCCTGGGTTCCATTCCTAACTCTGCCTCAAACTGTACATTTGGATAAGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307998.11
ENST00000528176.5
ENST00000531645.5
ENST00000531972.5
CDS-3UTR CCA 90 bp GAGTTAGGAATGGAACCCAGGGCCTCCTGGCGCTGTCCAGAGTGGAGTTTCTTATGTAGCGGTGCACAATaGATGAAGGCTGCTCTCGAC +
Preference number: 4 (lower is better)
Translates to: ELGMEPRASWRCPEWSFLCSGAQ*MKAALD
Trigger: GTCGAGAGCAGCCTTCATCCATTGTGCACCGCTACA...TAAGAAACTCCACTCTGGACAGCGCCAGGAGGCCCTGGGTTCCATTCCTAACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307998.11
ENST00000531972.5
CDS-3UTR TCA 90 bp TCCAGAGTGGAGTTTCTTAGGACCCCTGCAAGCCAGCCAAGTCCAAATCTCTGGGGCTCTTCAGAATCCTaGGGAGAAGCTGATCCCAAG +
Preference number: 4 (lower is better)
Translates to: SRVEFLRTPASQPSPNLWGSSES*GEADPK
Trigger: CTTGGGATCAGCTTCTCCTCAGGATTCTGAAGAGCC...CCAGAGATTTGGACTTGGCTGGCTTGCAGGGGTCCTAAGAAACTCCACTCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307998.11
ENST00000531972.5
CDS-3UTR TCA 90 bp CTCGTTACCTCCTCTCCTCTCGGGGTGACTGAAGCTCGTGGTGCAGAGCTCCCATCCAAATGTACAGTTTaGGGCAGAGTTAGGAATGGA +
Preference number: 4 (lower is better)
Translates to: LVTSSPLGVTEARGAELPSKCTV*GRVRNG
Trigger: TCCATTCCTAACTCTGCCTCAAACTGTACATTTGGA...TGGGAGCTCTGCACCACGAGCTTCAGTCACCCCGAGAGGAGAGGAGGTAACGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307998.11
ENST00000524408.1
ENST00000526911.1
ENST00000527277.5
ENST00000531972.5
CDS-3UTR TCA 90 bp GAACCCAGGGCCTCCTGGCGCTGTCCAGAGTGGAGTTTCTTAGGACCCCTGCAATCCAAATGTACAGTTTaGGGCAGAGTTAGGAATGGA +
Preference number: 4 (lower is better)
Translates to: EPRASWRCPEWSFLGPLQSKCTV*GRVRNG
Trigger: TCCATTCCTAACTCTGCCTCAAACTGTACATTTGGA...TTGCAGGGGTCCTAAGAAACTCCACTCTGGACAGCGCCAGGAGGCCCTGGGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000307998.11
ENST00000524408.1
ENST00000526911.1
ENST00000527277.5
ENST00000531972.5
CDS-3UTR GCA 90 bp TTTGAGGCAGAGTTAGGAATGGAACCCAGGGCCTCCTGGCGCTGTCCAGAGTGGACTCATCAATATCACTaGAGGAGAAGCCATCCCGAT +
Preference number: 4 (lower is better)
Translates to: FEAELGMEPRASWRCPEWTHQYH*RRSHPD
Trigger: ATCGGGATGGCTTCTCCTGCAGTGATATTGATGAGT...CCACTCTGGACAGCGCCAGGAGGCCCTGGGTTCCATTCCTAACTCTGCCTCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307998.11
ENST00000528176.5
ENST00000531972.5
CDS-3UTR CCA 90 bp TATCCAAATGTACAGTTTGAGGCAGAGTTAGGAATGGAACCCAGGGCCTCCTGGGCAGTGCTGGCTGTCTaGGTCCCACTCATAGCCATC +
Preference number: 4 (lower is better)
Translates to: YPNVQFEAELGMEPRASWAVLAV*VPLIAI
Trigger: GATGGCTATGAGTGGGACCCAGACAGCCAGCACTGC...CCAGGAGGCCCTGGGTTCCATTCCTAACTCTGCCTCAAACTGTACATTTGGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307998.11
ENST00000528176.5
ENST00000531972.5
CDS-3UTR CCA 90 bp ACTAGGGCTTATCCAAATGTACAGTTTGAGGCAGAGTTAGGAATGGAACCCAGGTATGGCAGTCCTGGCTaGGGCGACAGTCGTGCAGGG +
Preference number: 4 (lower is better)
Translates to: TRAYPNVQFEAELGMEPRYGSPG*GDSRAG
Trigger: CCCTGCACGACTGTCGCCCCAGCCAGGACTGCCATA...CCTGGGTTCCATTCCTAACTCTGCCTCAAACTGTACATTTGGATAAGCCCTAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307998.11
ENST00000528176.5
ENST00000531972.5
CDS-3UTR CCA 90 bp TATCCAAATGTACAGTTTGAGGCAGAGTTAGGAATGGAACCCAGGGCCTCCTGGAAGTTATGGCAGTCCTaGCTGGGGCGACAGTCGTGC +
Preference number: 4 (lower is better)
Translates to: YPNVQFEAELGMEPRASWKLWQS*LGRQSC
Trigger: GCACGACTGTCGCCCCAGCCAGGACTGCCATAACTT...CCAGGAGGCCCTGGGTTCCATTCCTAACTCTGCCTCAAACTGTACATTTGGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307998.11
ENST00000528176.5
ENST00000531972.5
CDS-3UTR CCA 90 bp GCTTATCCAAATGTACAGTTTGAGGCAGAGTTAGGAATGGAACCCAGGGCCTCCGCAGGAGAAACGGCCTaGCTCGTTGATGCAGCGGTA +
Preference number: 4 (lower is better)
Translates to: AYPNVQFEAELGMEPRASAGETA*LVDAAV
Trigger: TACCGCTGCATCAACGAGCCAGGCCGTTTCTCCTGC...GGAGGCCCTGGGTTCCATTCCTAACTCTGCCTCAAACTGTACATTTGGATAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307998.11
ENST00000528176.5
ENST00000531972.5
CDS-3UTR CCA 90 bp TATCCAAATGTACAGTTTGAGGCAGAGTTAGGAATGGAACCCAGGGCCTCCTGGGCAGGAGAAACGGCCTaGCTCGTTGATGCAGCGGTA +
Preference number: 4 (lower is better)
Translates to: YPNVQFEAELGMEPRASWAGETA*LVDAAV
Trigger: TACCGCTGCATCAACGAGCCAGGCCGTTTCTCCTGC...CCAGGAGGCCCTGGGTTCCATTCCTAACTCTGCCTCAAACTGTACATTTGGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307998.11
ENST00000528176.5
ENST00000531972.5
CDS-3UTR TCA 90 bp TATCCAAATGTACAGTTTGAGGCAGAGTTAGGAATGGAACCCAGGGCCTCCTGGAGCCCCCGTAGTGGTTaGTGCACTTCATTTCCCCCT +
Preference number: 4 (lower is better)
Translates to: YPNVQFEAELGMEPRASWSPRSG*CTSFPP
Trigger: AGGGGGAAATGAAGTGCATCAACCACTACGGGGGCT...CCAGGAGGCCCTGGGTTCCATTCCTAACTCTGCCTCAAACTGTACATTTGGATA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000307998.11
ENST00000528176.5
ENST00000531972.5
CDS-3UTR GCA 90 bp AGGGCTTATCCAAATGTACAGTTTGAGGCAGAGTTAGGAATGGAACCCAGGGCCAACCATCAGGGCAGGTaGACTGATAGGAGCCAGGCA +
Preference number: 4 (lower is better)
Translates to: RAYPNVQFEAELGMEPRANHQGR*TDRSQA
Trigger: TGCCTGGCTCCTATCAGTGCACCTGCCCTGATGGTT...GGCCCTGGGTTCCATTCCTAACTCTGCCTCAAACTGTACATTTGGATAAGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307998.11
ENST00000528176.5
ENST00000531972.5
CDS-3UTR GCA 90 bp GCTTATCCAAATGTACAGTTTGAGGCAGAGTTAGGAATGGAACCCAGGGCCTCCGGGCCTTTCTCATTCTaGCCCTCACAACAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: AYPNVQFEAELGMEPRASGPFSF*PSQQAP
Trigger: AGGAGCCTGTTGTGAGGGGCAGAATGAGAAAGGCCC...GGAGGCCCTGGGTTCCATTCCTAACTCTGCCTCAAACTGTACATTTGGATAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531645.5
ENST00000531972.5
CDS-3UTR CCA 90 bp AGGGCTTATCCAAATGTACAGTTTGAGGCAGAGTTAGGAATGGAACCCAGGGCCAAGTTGACACAGGTTTaGGCCTCGGAGCACTGGTGC +
Preference number: 4 (lower is better)
Translates to: RAYPNVQFEAELGMEPRAKLTQV*ASEHWC
Trigger: GCACCAGTGCTCCGAGGCCCAAACCTGTGTCAACTT...GGCCCTGGGTTCCATTCCTAACTCTGCCTCAAACTGTACATTTGGATAAGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307998.11
ENST00000528176.5
ENST00000531645.5
ENST00000531972.5
CDS-3UTR CCA 90 bp TATCCAAATGTACAGTTTGAGGCAGAGTTAGGAATGGAACCCAGGGCCTCCTGGTGGCGCTGTCCAGAGTaGAGTTTCTTAGGACCCCTG +
Preference number: 4 (lower is better)
Translates to: YPNVQFEAELGMEPRASWWRCPE*SFLGPL
Trigger: CAGGGGTCCTAAGAAACTCCACTCTGGACAGCGCCA...CCAGGAGGCCCTGGGTTCCATTCCTAACTCTGCCTCAAACTGTACATTTGGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307998.11
ENST00000524408.1
ENST00000526911.1
ENST00000527277.5
ENST00000528176.5
ENST00000531645.5
ENST00000531972.5
CDS-3UTR TCA 90 bp ACTAGGGCTTATCCAAATGTACAGTTTGAGGCAGAGTTAGGAATGGAACCCAGGAGGTCCCATAGGAGTTaGAGCAGCGCTGCTCGCATG +
Preference number: 4 (lower is better)
Translates to: TRAYPNVQFEAELGMEPRRSHRS*SSAARM
Trigger: CATGCGAGCAGCGCTGCTTCAACTCCTATGGGACCT...CCTGGGTTCCATTCCTAACTCTGCCTCAAACTGTACATTTGGATAAGCCCTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307998.11
ENST00000528176.5
ENST00000531972.5
CDS-3UTR CCA 90 bp AGAGTTAGGAATGGAACCCAGGGCCTCCTGGCGCTGTCCAGAGTGGAGTTTCTTACTGACAGAGGTAGCTaGAGTAGCTACACTCATCAA +
Preference number: 4 (lower is better)
Translates to: RVRNGTQGLLALSRVEFLTDRGS*SSYTHQ
Trigger: TTGATGAGTGTAGCTACTCCAGCTACCTCTGTCAGT...AAGAAACTCCACTCTGGACAGCGCCAGGAGGCCCTGGGTTCCATTCCTAACTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307998.11
ENST00000531972.5
CDS-3UTR CCA 90 bp GCTTATCCAAATGTACAGTTTGAGGCAGAGTTAGGAATGGAACCCAGGGCCTCCTGTAGCGGTGCACAATaGATGAAGGCTGCTCTCGAC +
Preference number: 4 (lower is better)
Translates to: AYPNVQFEAELGMEPRASCSGAQ*MKAALD
Trigger: GTCGAGAGCAGCCTTCATCCATTGTGCACCGCTACA...GGAGGCCCTGGGTTCCATTCCTAACTCTGCCTCAAACTGTACATTTGGATAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307998.11
ENST00000528176.5
ENST00000531645.5
ENST00000531972.5
CDS-3UTR CCA 90 bp AGGGCTTATCCAAATGTACAGTTTGAGGCAGAGTTAGGAATGGAACCCAGGGCCTGTAGCGGTGCACAATaGATGAAGGCTGCTCTCGAC +
Preference number: 4 (lower is better)
Translates to: RAYPNVQFEAELGMEPRACSGAQ*MKAALD
Trigger: GTCGAGAGCAGCCTTCATCCATTGTGCACCGCTACA...GGCCCTGGGTTCCATTCCTAACTCTGCCTCAAACTGTACATTTGGATAAGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307998.11
ENST00000528176.5
ENST00000531645.5
ENST00000531972.5
CDS-3UTR CCA 90 bp AATGTACAGTTTGAGGCAGAGTTAGGAATGGAACCCAGGGCCTCCTGGCGCTGTACTGACAGAGGTAGCTaGAGTAGCTACACTCATCAA +
Preference number: 4 (lower is better)
Translates to: NVQFEAELGMEPRASWRCTDRGS*SSYTHQ
Trigger: TTGATGAGTGTAGCTACTCCAGCTACCTCTGTCAGT...ACAGCGCCAGGAGGCCCTGGGTTCCATTCCTAACTCTGCCTCAAACTGTACATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307998.11
ENST00000528176.5
ENST00000531972.5
CDS-3UTR TCA 90 bp AGGGCTTATCCAAATGTACAGTTTGAGGCAGAGTTAGGAATGGAACCCAGGGCCTCCAAATGTACAGTTTaGGGCAGAGTTAGGAATGGA +
Preference number: 4 (lower is better)
Translates to: RAYPNVQFEAELGMEPRASKCTV*GRVRNG
Trigger: TCCATTCCTAACTCTGCCTCAAACTGTACATTTGGA...GGCCCTGGGTTCCATTCCTAACTCTGCCTCAAACTGTACATTTGGATAAGCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307998.11
ENST00000524408.1
ENST00000526911.1
ENST00000527277.5
ENST00000528176.5
ENST00000531645.5
ENST00000531972.5
CDS-3UTR TCA 90 bp TATCCAAATGTACAGTTTGAGGCAGAGTTAGGAATGGAACCCAGGGCCTCCTGGTCCAAATGTACAGTTTaGGGCAGAGTTAGGAATGGA +
Preference number: 4 (lower is better)
Translates to: YPNVQFEAELGMEPRASWSKCTV*GRVRNG
Trigger: TCCATTCCTAACTCTGCCTCAAACTGTACATTTGGA...CCAGGAGGCCCTGGGTTCCATTCCTAACTCTGCCTCAAACTGTACATTTGGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307998.11
ENST00000524408.1
ENST00000526911.1
ENST00000527277.5
ENST00000528176.5
ENST00000531645.5
ENST00000531972.5
CDS GCA 90 bp CCCGCGGCCCGCGGCTCTGGCGGCTCGGCTGGCTCGGGCAATGCCTaGGGGCAGACGGACGGGCGGACGGCACAGCTCCCTGGACGCGCG +
Preference number: 5 (lower is better)
Translates to: PAARGSGGSAGSGNA*GQTDGRTAQLPGRA
Trigger: CGCGCGTCCAGGGAGCTGTGCCGTCCGCCCGTCCGTCTGCCCGCAGGCATTGCCCGAGCCAGCCGAGCCGCCAGAGCCGCGGGCCGCGGG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307998.11
ENST00000531972.5
ENST00000533347.5
CDS GCA 90 bp CACCCCCGCGGCCCGCGGCTCTGGCGGCTCGGCTGGCTCGGGCAATaGCTGCGGGCAGACGGACGGGCGGACGGCACAGCTCCCTGGACG +
Preference number: 5 (lower is better)
Translates to: HPRGPRLWRLGWLGQ*LRADGRADGTAPWT
Trigger: CGTCCAGGGAGCTGTGCCGTCCGCCCGTCCGTCTGCCCGCAGGCATTGCCCGAGCCAGCCGAGCCGCCAGAGCCGCGGGCCGCGGGGGTG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307998.11
ENST00000531972.5
ENST00000533347.5
CDS-3UTR CAA 90 bp GGTGGCGGGGGTCCCTCGCCGTGTAGGTCGTTGATGACGGCAGCGGAGCGGGGCGGGAGCATCCTGGGGTaGGGCCCGCGACACCCCCGC +
Preference number: 5 (lower is better)
Translates to: GGGGPSPCRSLMTAAERGGSILG*GPRHPR
Trigger: GCGGGGGTGTCGCGGGCCCAACCCCAGGATGCTCCC...GCCCCGCTCCGCTGCCGTCATCAACGACCTACACGGCGAGGGACCCCCGCCACC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000530850.1
ENST00000533347.5
CDS GCA 90 bp GAGCATCCTGGGGCTGCGAGATGGTGGACACGGGTCAGGGGCCTCTaGCCGCGGCACCTCAACTCCCTGTACCGGGAGCCCGAGCCCAGC +
Preference number: 5 (lower is better)
Translates to: EHPGAARWWTRVRGL*PRHLNSLYREPEPS
Trigger: GCTGGGCTCGGGCTCCCGGTACAGGGAGTTGAGGTGCCGCGGGCAGAGGCCCCTGACCCGTGTCCACCATCTCGCAGCCCCAGGATGCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526624.5
CDS-3UTR CAA 90 bp ACCTCCTCTCCTCTCGGGGTGACTGAAGCTCGTGGTGCAGAGCTCCCAGCTCCTGGGAGCATCCTGGGGTaGGGCCCGCGACACCCCCGC +
Preference number: 5 (lower is better)
Translates to: TSSPLGVTEARGAELPAPGSILG*GPRHPR
Trigger: GCGGGGGTGTCGCGGGCCCAACCCCAGGATGCTCCC...AGGAGCTGGGAGCTCTGCACCACGAGCTTCAGTCACCCCGAGAGGAGAGGAGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000307998.11
ENST00000531972.5
CDS-3UTR CAA 90 bp GCCTTTCTCATTCTGCCCCTCACAACAGGCTCCTCAGCTAGGGTAGCTGCAGGGGGGAGCATCCTGGGGTaGGGCCCGCGACACCCCCGC +
Preference number: 5 (lower is better)
Translates to: AFLILPLTTGSSARVAAGGSILG*GPRHPR
Trigger: GCGGGGGTGTCGCGGGCCCAACCCCAGGATGCTCCC...CCCTGCAGCTACCCTAGCTGAGGAGCCTGTTGTGAGGGGCAGAATGAGAAAGGC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000307998.11
ENST00000531972.5
CDS CCA 90 bp TCCTGCCCATCCCACCCGGGCAACCTGTACCTTGGCAGAGGCGTGTaGCCAGCAGCTGGTAACCCTGTGGGCAGTGGCAGGAGAAACGGC +
Preference number: 5 (lower is better)
Translates to: SCPSHPGNLYLGRGV*PAAGNPVGSGRRNG
Trigger: GCCGTTTCTCCTGCCACTGCCCACAGGGTTACCAGCTGCTGGCCACACGCCTCTGCCAAGGTACAGGTTGCCCGGGTGGGATGGGCAGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527969.1
CDS-3UTR CAA 90 bp CCCATGTCACACTCGTTCACATCAACACAGGAGCGGTTGTTAGGCCCCAGCTGGGGGAGCATCCTGGGGTaGGGCCCGCGACACCCCCGC +
Preference number: 5 (lower is better)
Translates to: PMSHSFTSTQERLLGPSWGSILG*GPRHPR
Trigger: GCGGGGGTGTCGCGGGCCCAACCCCAGGATGCTCCC...CCAGCTGGGGCCTAACAACCGCTCCTGTGTTGATGTGAACGAGTGTGACATGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000533347.5
CDS-3UTR CAA 90 bp GGTCCCATAGGAGTTGAAGCAGCGCTGCTCGCATGGGGCCCCCATGTCACACTCGCAGGGGTTGGGGTGTaGAGCGGGAGGCACTGGTGG +
Preference number: 5 (lower is better)
Translates to: GPIGVEAALLAWGPHVTLAGVGV*SGRHWW
Trigger: CCACCAGTGCCTCCCGCTCAACACCCCAACCCCTGC...GAGTGTGACATGGGGGCCCCATGCGAGCAGCGCTGCTTCAACTCCTATGGGACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000533347.5
CDS TCA 90 bp CCACGCAGCGGTTGGTGTCCACGCAGCGGTAGCCCCCATGGAAGTTaGCACAGGTTTGGGCCTCGGAGCACTGGTGCGCACCAGACTCAC +
Preference number: 5 (lower is better)
Translates to: PRSGWCPRSGSPHGS*HRFGPRSTGAHQTH
Trigger: GTGAGTCTGGTGCGCACCAGTGCTCCGAGGCCCAAACCTGTGTCAACTTCCATGGGGGCTACCGCTGCGTGGACACCAACCGCTGCGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000307998.11
ENST00000525392.1
ENST00000526628.5
ENST00000528176.5
ENST00000528409.1
ENST00000530806.5
ENST00000531005.5
ENST00000531645.5
ENST00000531972.5
ENST00000532084.5
CDS TCA 90 bp ACAGCCAGCCGGGGTCGAGTACCCAGGAGGCAGCTGGGTGCACAGTaGCAGGAGGCGGAGGCCTCAAATGGAGAACTGTGTGGCAGGAGG +
Preference number: 5 (lower is better)
Translates to: TASRGRVPRRQLGAQ*QEAEASNGELCGRR
Trigger: CCTCCTGCCACACAGTTCTCCATTTGAGGCCTCCGCCTCCTGTCACTGTGCACCCAGCTGCCTCCTGGGTACTCGACCCCGGCTGGCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526628.5
ENST00000527969.1
CDS GCA 90 bp GTGCTCCACAGCCAGCCGGGGTCGAGTACCCAGGAGGCAGCTGGGTaGACAGTGACAGGAGGCGGAGGCCTCAAATGGAGAACTGTGTGG +
Preference number: 5 (lower is better)
Translates to: VLHSQPGSSTQEAAG*TVTGGGGLKWRTVW
Trigger: CCACACAGTTCTCCATTTGAGGCCTCCGCCTCCTGTCACTGTGCACCCAGCTGCCTCCTGGGTACTCGACCCCGGCTGGCTGTGGAGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526628.5
ENST00000527969.1
CDS GCA 90 bp AGCCAGAGCTGGCCTCTGTGTAGCAGAGCTGGGCATAGAACGGGCTaGTGGGCTCCCACGGCAGTTCTTGGAGGTGGGGCTGTCCCTTGG +
Preference number: 5 (lower is better)
Translates to: SQSWPLCSRAGHRTG*WAPTAVLGGGAVPW
Trigger: CCAAGGGACAGCCCCACCTCCAAGAACTGCCGTGGGAGCCCAGCAGCCCGTTCTATGCCCAGCTCTGCTACACAGAGGCCAGCTCTGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529870.1
ENST00000531005.5
CDS-3UTR CAA 90 bp ACAGCTGTCCTGATCGTCGGGCTCATAGCCTGGTGGGCAGGGGTTGGGGTGTTGTCGCCGTGTAGGTCGTaGATGACGGCAGCGGAGCGG +
Preference number: 5 (lower is better)
Translates to: TAVLIVGLIAWWAGVGVLSPCRS*MTAAER
Trigger: CCGCTCCGCTGCCGTCATCAACGACCTACACGGCGA...CAACACCCCAACCCCTGCCCACCAGGCTATGAGCCCGACGATCAGGACAGCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530850.1
ENST00000533347.5
CDS-3UTR CAA 90 bp GGAACCCAGGGCCTCCTGGCGCTGTCCAGAGTGGAGTTTCTTAGGACCCCTGCATCGCCGTGTAGGTCGTaGATGACGGCAGCGGAGCGG +
Preference number: 5 (lower is better)
Translates to: GTQGLLALSRVEFLRTPASPCRS*MTAAER
Trigger: CCGCTCCGCTGCCGTCATCAACGACCTACACGGCGA...TGCAGGGGTCCTAAGAAACTCCACTCTGGACAGCGCCAGGAGGCCCTGGGTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307998.11
ENST00000531972.5
CDS-3UTR CAA 90 bp CTCCTCGTTACCTCCTCTCCTCTCGGGGTGACTGAAGCTCGTGGTGCAGAGCTCGCAGGGGTTGGGGTGTaGAGCGGGAGGCACTGGTGG +
Preference number: 5 (lower is better)
Translates to: LLVTSSPLGVTEARGAELAGVGV*SGRHWW
Trigger: CCACCAGTGCCTCCCGCTCAACACCCCAACCCCTGC...GAGCTCTGCACCACGAGCTTCAGTCACCCCGAGAGGAGAGGAGGTAACGAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000307998.11
ENST00000531972.5
CDS TCA 90 bp CTGGCCCTGGAGGGAGCGGAGGCAGGAACCCAGCTCGGCCTTCTCTaGGATGTGTGGCCCCAGCAAAGCCTTCCCACTCTGCTCAACAAG +
Preference number: 5 (lower is better)
Translates to: LALEGAEAGTQLGLL*DVWPQQSLPTLLNK
Trigger: CTTGTTGAGCAGAGTGGGAAGGCTTTGCTGGGGCCACACATCTCAGAGAAGGCCGAGCTGGGTTCCTGCCTCCGCTCCCTCCAGGGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531005.5
CDS GCA 90 bp CCCAGGGTTGGCCAAGGCTGGAGATGGGGCAGCTGTTCCCACTGTTaGCCTCATTCTCGGCCTGCAAGTGGGTCTCTATCCCTCCCCACG +
Preference number: 5 (lower is better)
Translates to: PRVGQGWRWGSCSHC*PHSRPASGSLSLPT
Trigger: CGTGGGGAGGGATAGAGACCCACTTGCAGGCCGAGAATGAGGGCAACAGTGGGAACAGCTGCCCCATCTCCAGCCTTGGCCAACCCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000529870.1
ENST00000531005.5
CDS-3UTR CAA 90 bp AATGTACAGTTTGAGGCAGAGTTAGGAATGGAACCCAGGGCCTCCTGGCGCTGTGGGAGCATCCTGGGGTaGGGCCCGCGACACCCCCGC +
Preference number: 5 (lower is better)
Translates to: NVQFEAELGMEPRASWRCGSILG*GPRHPR
Trigger: GCGGGGGTGTCGCGGGCCCAACCCCAGGATGCTCCC...ACAGCGCCAGGAGGCCCTGGGTTCCATTCCTAACTCTGCCTCAAACTGTACATT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000307998.11
ENST00000528176.5
ENST00000531972.5
CDS-3UTR CAA 90 bp GCCTCCTGGCGCTGTCCAGAGTGGAGTTTCTTAGGACCCCTGCAAGCCAGCCAATCGCCGTGTAGGTCGTaGATGACGGCAGCGGAGCGG +
Preference number: 5 (lower is better)
Translates to: ASWRCPEWSFLGPLQASQSPCRS*MTAAER
Trigger: CCGCTCCGCTGCCGTCATCAACGACCTACACGGCGA...TTGGCTGGCTTGCAGGGGTCCTAAGAAACTCCACTCTGGACAGCGCCAGGAGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307998.11
ENST00000531972.5
CDS-3UTR CAA 90 bp GAGGCAGAGTTAGGAATGGAACCCAGGGCCTCCTGGCGCTGTCCAGAGTGGAGTTCGCCGTGTAGGTCGTaGATGACGGCAGCGGAGCGG +
Preference number: 5 (lower is better)
Translates to: EAELGMEPRASWRCPEWSSPCRS*MTAAER
Trigger: CCGCTCCGCTGCCGTCATCAACGACCTACACGGCGA...ACTCCACTCTGGACAGCGCCAGGAGGCCCTGGGTTCCATTCCTAACTCTGCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307998.11
ENST00000528176.5
ENST00000531972.5
CDS-3UTR CAA 90 bp TTTGAGGCAGAGTTAGGAATGGAACCCAGGGCCTCCTGGCGCTGTCCAGAGTGGGCAGGGGTTGGGGTGTaGAGCGGGAGGCACTGGTGG +
Preference number: 5 (lower is better)
Translates to: FEAELGMEPRASWRCPEWAGVGV*SGRHWW
Trigger: CCACCAGTGCCTCCCGCTCAACACCCCAACCCCTGC...CCACTCTGGACAGCGCCAGGAGGCCCTGGGTTCCATTCCTAACTCTGCCTCAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307998.11
ENST00000528176.5
ENST00000531972.5
CDS-3UTR CAA 90 bp ACTCGTCTATGTCCACACACTCGGGCCCGATCTTGCGGTAACCATCAGGGCAGGGCAGGGGTTGGGGTGTaGAGCGGGAGGCACTGGTGG +
Preference number: 5 (lower is better)
Translates to: TRLCPHTRARSCGNHQGRAGVGV*SGRHWW
Trigger: CCACCAGTGCCTCCCGCTCAACACCCCAACCCCTGC...CCTGCCCTGATGGTTACCGCAAGATCGGGCCCGAGTGTGTGGACATAGACGAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530850.1
ENST00000533347.5
CDS-3UTR CAA 90 bp ACCCCTGCAAGCCAGCCAAGTCCAAATCTCTGGGCCGGGGCCTGGAGTCCGCCCACACTCATCAATGTCTaGGCAGAGGCGTGTGGCCAG +
Preference number: 5 (lower is better)
Translates to: TPASQPSPNLWAGAWSPPTLINV*AEACGQ
Trigger: CTGGCCACACGCCTCTGCCAAGACATTGATGAGTGT...GGGCGGACTCCAGGCCCCGGCCCAGAGATTTGGACTTGGCTGGCTTGCAGGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000307998.11
ENST00000531972.5
CDS GCA 90 bp ACAGGCTCCTCAGCTAGGGTAGCTGCAGGGAGGGTGGCTCCCTCCTaGTCCTCAGAAGGTGTAGGCCCCTACAAAGACGGTGAGCCTCAG +
Preference number: 5 (lower is better)
Translates to: TGSSARVAAGRVAPS*SSEGVGPYKDGEPQ
Trigger: CTGAGGCTCACCGTCTTTGTAGGGGCCTACACCTTCTGAGGAGCAGGAGGGAGCCACCCTCCCTGCAGCTACCCTAGCTGAGGAGCCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000307998.11
ENST00000524408.1
ENST00000526628.5
ENST00000527277.5
ENST00000528409.1
ENST00000531972.5
ENST00000532648.1
CDS GCA 90 bp CACCCACACACTCGGGCCCGATCTTGCGGTAACCATCAGGGCAGGTaGACTGATAGGAGCCAGGCAAGTTATGGCAGTCCTGGCTGGGGC +
Preference number: 5 (lower is better)
Translates to: HPHTRARSCGNHQGR*TDRSQASYGSPGWG
Trigger: GCCCCAGCCAGGACTGCCATAACTTGCCTGGCTCCTATCAGTGCACCTGCCCTGATGGTTACCGCAAGATCGGGCCCGAGTGTGTGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527969.1
CDS GCA 90 bp GGGGGTCCACAGAGGAGTACACAGCAGGGATGGAGCTCTCACCACTaGAGGAGAAGCCATCCCGATGCAGCTCATAGCCCTGGTGGCAGC +
Preference number: 5 (lower is better)
Translates to: GGPQRSTQQGWSSHH*RRSHPDAAHSPGGS
Trigger: GCTGCCACCAGGGCTATGAGCTGCATCGGGATGGCTTCTCCTGCAGTGGTGAGAGCTCCATCCCTGCTGTGTACTCCTCTGTGGACCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526628.5
ENST00000527969.1
CDS-3UTR CAA 90 bp GCTCGCATGGGGCCCCCATGTCACACTCGTTCACATCAACACAGGAGCGGTTGTTCGCCGTGTAGGTCGTaGATGACGGCAGCGGAGCGG +
Preference number: 5 (lower is better)
Translates to: ARMGPPCHTRSHQHRSGCSPCRS*MTAAER
Trigger: CCGCTCCGCTGCCGTCATCAACGACCTACACGGCGA...ACAACCGCTCCTGTGTTGATGTGAACGAGTGTGACATGGGGGCCCCATGCGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533347.5
CDS TCA 90 bp TCGCCTGGATCTGGAACACGTCAGCGGGCACGCTCCGCTCCGAGGTaGTGGTCATGTAGCGGTGCACAATGGATGAAGGCTGCTCTCGAC +
Preference number: 5 (lower is better)
Translates to: SPGSGTRQRARSAPR*WSCSGAQWMKAALD
Trigger: GTCGAGAGCAGCCTTCATCCATTGTGCACCGCTACATGACCATCACCTCGGAGCGGAGCGTGCCCGCTGACGTGTTCCAGATCCAGGCGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000307998.11
ENST00000525392.1
ENST00000526628.5
ENST00000528176.5
ENST00000528409.1
ENST00000531005.5
ENST00000531645.5
ENST00000531972.5
ENST00000532084.5
CDS-3UTR CAA 90 bp CAGGGCCTCCTGGCGCTGTCCAGAGTGGAGTTTCTTAGGACCCCTGCAAGCCAGATGGTCAGACACTCGTaGACATCCCGGCAGTGCTGG +
Preference number: 5 (lower is better)
Translates to: QGLLALSRVEFLRTPASQMVRHS*TSRQCW
Trigger: CCAGCACTGCCGGGATGTCAACGAGTGTCTGACCAT...CTGGCTTGCAGGGGTCCTAAGAAACTCCACTCTGGACAGCGCCAGGAGGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307998.11
ENST00000531972.5
CDS-3UTR CAA 90 bp CAGGGCCTCCTGGCGCTGTCCAGAGTGGAGTTTCTTAGGACCCCTGCAAGCCAGCACTTCATTTCCCCCTaGCAGGCCTCAGGGATGGTC +
Preference number: 5 (lower is better)
Translates to: QGLLALSRVEFLRTPASQHFISP*QASGMV
Trigger: GACCATCCCTGAGGCCTGCAAGGGGGAAATGAAGTG...CTGGCTTGCAGGGGTCCTAAGAAACTCCACTCTGGACAGCGCCAGGAGGCCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000307998.11
ENST00000531972.5
CDS-3UTR CAA 90 bp GATAGGAGCCAGGCAAGTTATGGCAGTCCTGGCTGGGGCGACAGTCGTGCAGGGCACTTCATTTCCCCCTaGCAGGCCTCAGGGATGGTC +
Preference number: 5 (lower is better)
Translates to: DRSQASYGSPGWGDSRAGHFISP*QASGMV
Trigger: GACCATCCCTGAGGCCTGCAAGGGGGAAATGAAGTG...CCCTGCACGACTGTCGCCCCAGCCAGGACTGCCATAACTTGCCTGGCTCCTATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000530850.1
ENST00000533347.5
CDS-3UTR CAA 90 bp GGCAGGTGCACTGATAGGAGCCAGGCAAGTTATGGCAGTCCTGGCTGGGGCGACCACTTCATTTCCCCCTaGCAGGCCTCAGGGATGGTC +
Preference number: 5 (lower is better)
Translates to: GRCTDRSQASYGSPGWGDHFISP*QASGMV
Trigger: GACCATCCCTGAGGCCTGCAAGGGGGAAATGAAGTG...GTCGCCCCAGCCAGGACTGCCATAACTTGCCTGGCTCCTATCAGTGCACCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000530850.1
ENST00000533347.5
CDS-3UTR CAA 90 bp GTGCAGAGCTCCCAGCTCCTGTCAATGGGGGCCCCTGGGCCTGAACATATAGAGTCTCGACATAGAGGGTaGGAGGCCGGGCAGAGACAG +
Preference number: 5 (lower is better)
Translates to: VQSSQLLSMGAPGPEHIESRHRG*EAGQRQ
Trigger: CTGTCTCTGCCCGGCCTCCAACCCTCTATGTCGAGA...CTCTATATGTTCAGGCCCAGGGGCCCCCATTGACAGGAGCTGGGAGCTCTGCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000307998.11
CDS-3UTR CAA 90 bp GGCAAGTTATGGCAGTCCTGGCTGGGGCGACAGTCGTGCAGGGCCTGGGCACACATGGTCAGACACTCGTaGACATCCTTCCTGTCCCAG +
Preference number: 5 (lower is better)
Translates to: GKLWQSWLGRQSCRAWAHMVRHS*TSFLSQ
Trigger: CTGGGACAGGAAGGATGTCAACGAGTGTCTGACCAT...GTGTGCCCAGGCCCTGCACGACTGTCGCCCCAGCCAGGACTGCCATAACTTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530850.1
CDS TCA 90 bp ACTTCATTTCCCCCTTGCAGGCCTCAGGGATGGTCAGACACTCGTTaGCATCTGCAGAGAGGGGCCTGCTGGGCACAGCCAGTCTCCTGG +
Preference number: 5 (lower is better)
Translates to: TSFPPCRPQGWSDTR*HLQRGACWAQPVSW
Trigger: CCAGGAGACTGGCTGTGCCCAGCAGGCCCCTCTCTGCAGATGTCAACGAGTGTCTGACCATCCCTGAGGCCTGCAAGGGGGAAATGAAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531005.5
ENST00000533347.5
CDS GCA 90 bp CCTGGGCACACTCGTCCACATCTGCGAGAGACACCACTCAGCCCCTaGCTGGGATCCCGCACACCACCCAACATGACAGATAGTTCCAAC +
Preference number: 5 (lower is better)
Translates to: PGHTRPHLRETPLSP*LGSRTPPNMTDSSN
Trigger: GTTGGAACTATCTGTCATGTTGGGTGGTGTGCGGGATCCCAGGCAGGGGCTGAGTGGTGTCTCTCGCAGATGTGGACGAGTGTGCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531005.5
CDS-3UTR CAA 90 bp ATGGAACCCAGGGCCTCCTGGCGCTGTCCAGAGTGGAGTTTCTTAGGACCCCTGGAAGTTGACACAGGTTaGGGCCTCGGAGCACTGGTG +
Preference number: 5 (lower is better)
Translates to: MEPRASWRCPEWSFLGPLEVDTG*GLGALV
Trigger: CACCAGTGCTCCGAGGCCCAAACCTGTGTCAACTTC...CAGGGGTCCTAAGAAACTCCACTCTGGACAGCGCCAGGAGGCCCTGGGTTCCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307998.11
ENST00000531972.5
CDS TCA 90 bp CTGGGACTCAAGGCTTCACCACCCATAATCCTGTGTCCGAGGAGCTaGATTAGGCAGGGTCAGCCAGGACACCTCCCAAACACTCCCCGC +
Preference number: 5 (lower is better)
Translates to: LGLKASPPIILCPRS*IRQGQPGHLPNTPR
Trigger: GCGGGGAGTGTTTGGGAGGTGTCCTGGCTGACCCTGCCTAATTCAGCTCCTCGGACACAGGATTATGGGTGGTGAAGCCTTGAGTCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527969.1
CDS TCA 90 bp TCGCCTGGATCTGGAACACGTCAGCGGGCACGCTCCGCTCCGAGGTaGTGGTCATGTAGCGGTGCACAATGGATGAAGGTTCTCAGAGAC +
Preference number: 5 (lower is better)
Translates to: SPGSGTRQRARSAPR*WSCSGAQWMKVLRD
Trigger: GTCTCTGAGAACCTTCATCCATTGTGCACCGCTACATGACCATCACCTCGGAGCGGAGCGTGCCCGCTGACGTGTTCCAGATCCAGGCGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530806.5
CDS GCA 90 bp ACAGAAGCTGCTTCCTGGACTCACCCACACACTCGGGCCCGATCTTaGGGTAACCATCAGGGCAGGTGCACTGATAGGAGCCAGGCAAGT +
Preference number: 5 (lower is better)
Translates to: TEAASWTHPHTRARS*GNHQGRCTDRSQAS
Trigger: ACTTGCCTGGCTCCTATCAGTGCACCTGCCCTGATGGTTACCGCAAGATCGGGCCCGAGTGTGTGGGTGAGTCCAGGAAGCAGCTTCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527969.1
CDS-3UTR CAA 90 bp GCAGAGTTAGGAATGGAACCCAGGGCCTCCTGGCGCTGTCCAGAGTGGAGTTTCGAAGTTGACACAGGTTaGGGCCTCGGAGCACTGGTG +
Preference number: 5 (lower is better)
Translates to: AELGMEPRASWRCPEWSFEVDTG*GLGALV
Trigger: CACCAGTGCTCCGAGGCCCAAACCTGTGTCAACTTC...GAAACTCCACTCTGGACAGCGCCAGGAGGCCCTGGGTTCCATTCCTAACTCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307998.11
ENST00000528176.5
ENST00000531645.5
ENST00000531972.5
CDS-3UTR CAA 90 bp AGAAGCCATCCCGATGCAGCTCATAGCCCTGGTGGCAGCGACACAGGAAGGTCCATGGTCAGACACTCGTaGACATCTGCAGAGAGGGGC +
Preference number: 5 (lower is better)
Translates to: RSHPDAAHSPGGSDTGRSMVRHS*TSAERG
Trigger: GCCCCTCTCTGCAGATGTCAACGAGTGTCTGACCAT...GGACCTTCCTGTGTCGCTGCCACCAGGGCTATGAGCTGCATCGGGATGGCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533347.5
CDS TCA 90 bp GCTGGTAACCCTGTGGGCAGTGGCAGGAGAAACGGCCTGGCTCGTTaGTGCAGCGGTACTGACAGAGGTAGCTGGAGTAGCTACACTCAT +
Preference number: 5 (lower is better)
Translates to: AGNPVGSGRRNGLAR*CSGTDRGSWSSYTH
Trigger: ATGAGTGTAGCTACTCCAGCTACCTCTGTCAGTACCGCTGCATCAACGAGCCAGGCCGTTTCTCCTGCCACTGCCCACAGGGTTACCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307998.11
ENST00000526628.5
ENST00000527969.1
ENST00000528176.5
ENST00000531005.5
ENST00000531972.5
ENST00000532084.5
CDS-3UTR CAA 90 bp GCTTATCCAAATGTACAGTTTGAGGCAGAGTTAGGAATGGAACCCAGGGCCTCCGCAGGGGTTGGGGTGTaGAGCGGGAGGCACTGGTGG +
Preference number: 5 (lower is better)
Translates to: AYPNVQFEAELGMEPRASAGVGV*SGRHWW
Trigger: CCACCAGTGCCTCCCGCTCAACACCCCAACCCCTGC...GGAGGCCCTGGGTTCCATTCCTAACTCTGCCTCAAACTGTACATTTGGATAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000307998.11
ENST00000528176.5
ENST00000531972.5
CDS-3UTR CAA 90 bp GCAGAGTTAGGAATGGAACCCAGGGCCTCCTGGCGCTGTCCAGAGTGGAGTTTCACACTCATCAATGTCTaGGCAGAGGCGTGTGGCCAG +
Preference number: 5 (lower is better)
Translates to: AELGMEPRASWRCPEWSFTLINV*AEACGQ
Trigger: CTGGCCACACGCCTCTGCCAAGACATTGATGAGTGT...GAAACTCCACTCTGGACAGCGCCAGGAGGCCCTGGGTTCCATTCCTAACTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307998.11
ENST00000528176.5
ENST00000531972.5
CDS TCA 90 bp GGACAGGAGAGTGGTTCAGAGAAGGCGTACAGGATCCAGCTCCTCTaGGGGGTAGGGACAAGGTTTCCTGGGTTTCTGGGAGAGGATGAG +
Preference number: 5 (lower is better)
Translates to: GQESGSEKAYRIQLL*GVGTRFPGFLGEDE
Trigger: CTCATCCTCTCCCAGAAACCCAGGAAACCTTGTCCCTACCCCTCAGAGGAGCTGGATCCTGTACGCCTTCTCTGAACCACTCTCCTGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529870.1
ENST00000531005.5
CDS TCA 90 bp AGGGTGTGGACATCACCAGTGGCCCTTTTGAGCTGGGGAGGAACATaGGGTCTGAGTTTAAGACGCCTGGTGAGAGGACTGGAAGCCAGG +
Preference number: 5 (lower is better)
Translates to: RVWTSPVALLSWGGT*GLSLRRLVRGLEAR
Trigger: CCTGGCTTCCAGTCCTCTCACCAGGCGTCTTAAACTCAGACCTCATGTTCCTCCCCAGCTCAAAAGGGCCACTGGTGATGTCCACACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531005.5
CDS GCA 90 bp GCAGTGAGGCCTCATCCCGCAGCAAAGCATAACATAGGGGGTACATaGCAGTTTACAGGGTGTAAGAAGTCTGGGATCCAGCCCTGGCCC +
Preference number: 5 (lower is better)
Translates to: AVRPHPAAKHNIGGT*QFTGCKKSGIQPWP
Trigger: GGGCCAGGGCTGGATCCCAGACTTCTTACACCCTGTAAACTGGCATGTACCCCCTATGTTATGCTTTGCTGCGGGATGAGGCCTCACTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526628.5
CDS-3UTR CAA 90 bp CGCTGTCCAGAGTGGAGTTTCTTAGGACCCCTGCAAGCCAGCCAAGTCCAAATCATGGTCAGACACTCGTaGACATCCCGGCAGTGCTGG +
Preference number: 5 (lower is better)
Translates to: RCPEWSFLGPLQASQVQIMVRHS*TSRQCW
Trigger: CCAGCACTGCCGGGATGTCAACGAGTGTCTGACCAT...GATTTGGACTTGGCTGGCTTGCAGGGGTCCTAAGAAACTCCACTCTGGACAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000307998.11
ENST00000531972.5
CDS-3UTR CAA 90 bp AGAGTTAGGAATGGAACCCAGGGCCTCCTGGCGCTGTCCAGAGTGGAGTTTCTTCACTTCATTTCCCCCTaGCAGGCCTCAGGGATGGTC +
Preference number: 5 (lower is better)
Translates to: RVRNGTQGLLALSRVEFLHFISP*QASGMV
Trigger: GACCATCCCTGAGGCCTGCAAGGGGGAAATGAAGTG...AAGAAACTCCACTCTGGACAGCGCCAGGAGGCCCTGGGTTCCATTCCTAACTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000307998.11
ENST00000531972.5
CDS-3UTR CAA 90 bp TTAGGAATGGAACCCAGGGCCTCCTGGCGCTGTCCAGAGTGGAGTTTCTTAGGAGAAGTTGACACAGGTTaGGGCCTCGGAGCACTGGTG +
Preference number: 5 (lower is better)
Translates to: LGMEPRASWRCPEWSFLGEVDTG*GLGALV
Trigger: CACCAGTGCTCCGAGGCCCAAACCTGTGTCAACTTC...TCCTAAGAAACTCCACTCTGGACAGCGCCAGGAGGCCCTGGGTTCCATTCCTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000307998.11
ENST00000531972.5
CDS GCA 90 bp ACAAGCCACAAGTTCAGCCGGGAGATGGAGGGTTCAAAGAAAGTTTaGCCAGGCTGCCGCAGCTCACAGACTTCTCTCTGCCCAGAACTC +
Preference number: 5 (lower is better)
Translates to: TSHKFSREMEGSKKV*PGCRSSQTSLCPEL
Trigger: GAGTTCTGGGCAGAGAGAAGTCTGTGAGCTGCGGCAGCCTGGGCAAACTTTCTTTGAACCCTCCATCTCCCGGCTGAACTTGTGGCTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527969.1
CDS GCA 90 bp ACAAGCCACAAGTTCAGCCGGGAGATGGAGGGTTCAAAGAAAGTTTaGCCAGGCTGCCGCAGCTCACAGACTTCTCTCTGCCCAGAACTG +
Preference number: 5 (lower is better)
Translates to: TSHKFSREMEGSKKV*PGCRSSQTSLCPEL
Trigger: CAGTTCTGGGCAGAGAGAAGTCTGTGAGCTGCGGCAGCCTGGGCAAACTTTCTTTGAACCCTCCATCTCCCGGCTGAACTTGTGGCTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526628.5
CDS-3UTR CAA 90 bp TCGTGGTGCAGAGCTCCCAGCTCCTGTCAATGGGGGCCCCTGGGCCTTTCTCATGCTGACGTTGTTGATTaGCCTAATGTAAAAGTCCCC +
Preference number: 5 (lower is better)
Translates to: SWCRAPSSCQWGPLGLSHADVVD*PNVKVP
Trigger: GGGGACTTTTACATTAGGCAAATCAACAACGTCAGC...ATGAGAAAGGCCCAGGGGCCCCCATTGACAGGAGCTGGGAGCTCTGCACCACGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000531972.5
CDS TCA 90 bp AGACACCACTCAGCCCCTGCCTGGGATCCCGCACACCACCCAACATaGCAGATAGTTCCAACACTTGTATTCGGTTCTCTCAACAGCACG +
Preference number: 5 (lower is better)
Translates to: RHHSAPAWDPAHHPT*QIVPTLVFGSLNST
Trigger: CGTGCTGTTGAGAGAACCGAATACAAGTGTTGGAACTATCTGTCATGTTGGGTGGTGTGCGGGATCCCAGGCAGGGGCTGAGTGGTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531005.5
CDS GCA 90 bp AAGTTCAGCCGGGAGATGGAGGGTTCAAAGAAAGTTTGCCCAGGCTaGCGCAGCTCACAGACTTCTCTCTGCCCAGAACTCCTAGGATTC +
Preference number: 5 (lower is better)
Translates to: KFSREMEGSKKVCPG*RSSQTSLCPELLGF
Trigger: GAATCCTAGGAGTTCTGGGCAGAGAGAAGTCTGTGAGCTGCGGCAGCCTGGGCAAACTTTCTTTGAACCCTCCATCTCCCGGCTGAACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527969.1
CDS-3UTR CAA 90 bp TATCCAAATGTACAGTTTGAGGCAGAGTTAGGAATGGAACCCAGGGCCTCCTGGTCTCGACATAGAGGGTaGGAGGCCGGGCAGAGACAG +
Preference number: 5 (lower is better)
Translates to: YPNVQFEAELGMEPRASWSRHRG*EAGQRQ
Trigger: CTGTCTCTGCCCGGCCTCCAACCCTCTATGTCGAGA...CCAGGAGGCCCTGGGTTCCATTCCTAACTCTGCCTCAAACTGTACATTTGGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307998.11
ENST00000528176.5
ENST00000531645.5
ENST00000531972.5
CDS-3UTR CAA 90 bp GCTTATCCAAATGTACAGTTTGAGGCAGAGTTAGGAATGGAACCCAGGGCCTCCTCTCGACATAGAGGGTaGGAGGCCGGGCAGAGACAG +
Preference number: 5 (lower is better)
Translates to: AYPNVQFEAELGMEPRASSRHRG*EAGQRQ
Trigger: CTGTCTCTGCCCGGCCTCCAACCCTCTATGTCGAGA...GGAGGCCCTGGGTTCCATTCCTAACTCTGCCTCAAACTGTACATTTGGATAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307998.11
ENST00000528176.5
ENST00000531645.5
ENST00000531972.5
CDS-3UTR CAA 90 bp ATGGAACCCAGGGCCTCCTGGCGCTGTCCAGAGTGGAGTTTCTTAGGACCCCTGGCTGACGTTGTTGATTaGCCTAATGTAAAAGTCCCC +
Preference number: 5 (lower is better)
Translates to: MEPRASWRCPEWSFLGPLADVVD*PNVKVP
Trigger: GGGGACTTTTACATTAGGCAAATCAACAACGTCAGC...CAGGGGTCCTAAGAAACTCCACTCTGGACAGCGCCAGGAGGCCCTGGGTTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307998.11
ENST00000524408.1
ENST00000526911.1
ENST00000531972.5
CDS-3UTR CAA 90 bp GCTTATCCAAATGTACAGTTTGAGGCAGAGTTAGGAATGGAACCCAGGGCCTCCATGGTCAGACACTCGTaGACATCCCGGCAGTGCTGG +
Preference number: 5 (lower is better)
Translates to: AYPNVQFEAELGMEPRASMVRHS*TSRQCW
Trigger: CCAGCACTGCCGGGATGTCAACGAGTGTCTGACCAT...GGAGGCCCTGGGTTCCATTCCTAACTCTGCCTCAAACTGTACATTTGGATAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307998.11
ENST00000528176.5
ENST00000531972.5
CDS-3UTR CAA 90 bp AGGGCTTATCCAAATGTACAGTTTGAGGCAGAGTTAGGAATGGAACCCAGGGCCACACTCATCAATGTCTaGGCAGAGGCGTGTGGCCAG +
Preference number: 5 (lower is better)
Translates to: RAYPNVQFEAELGMEPRATLINV*AEACGQ
Trigger: CTGGCCACACGCCTCTGCCAAGACATTGATGAGTGT...GGCCCTGGGTTCCATTCCTAACTCTGCCTCAAACTGTACATTTGGATAAGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307998.11
ENST00000528176.5
ENST00000531972.5
CDS-3UTR CAA 90 bp ACTAGGGCTTATCCAAATGTACAGTTTGAGGCAGAGTTAGGAATGGAACCCAGGCACTTCATTTCCCCCTaGCAGGCCTCAGGGATGGTC +
Preference number: 5 (lower is better)
Translates to: TRAYPNVQFEAELGMEPRHFISP*QASGMV
Trigger: GACCATCCCTGAGGCCTGCAAGGGGGAAATGAAGTG...CCTGGGTTCCATTCCTAACTCTGCCTCAAACTGTACATTTGGATAAGCCCTAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000307998.11
ENST00000528176.5
ENST00000531972.5
CDS-3UTR CAA 90 bp ACTAGGGCTTATCCAAATGTACAGTTTGAGGCAGAGTTAGGAATGGAACCCAGGGAAGTTGACACAGGTTaGGGCCTCGGAGCACTGGTG +
Preference number: 5 (lower is better)
Translates to: TRAYPNVQFEAELGMEPREVDTG*GLGALV
Trigger: CACCAGTGCTCCGAGGCCCAAACCTGTGTCAACTTC...CCTGGGTTCCATTCCTAACTCTGCCTCAAACTGTACATTTGGATAAGCCCTAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000307998.11
ENST00000528176.5
ENST00000531645.5
ENST00000531972.5
CDS-3UTR CAA 90 bp CTGTCCAGAGTGGAGTTTCTTAGGACCCCTGCAAGCCAGCCAAGTCCAAATCTCGCTGACGTTGTTGATTaGCCTAATGTAAAAGTCCCC +
Preference number: 5 (lower is better)
Translates to: LSRVEFLRTPASQPSPNLADVVD*PNVKVP
Trigger: GGGGACTTTTACATTAGGCAAATCAACAACGTCAGC...GAGATTTGGACTTGGCTGGCTTGCAGGGGTCCTAAGAAACTCCACTCTGGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000307998.11
ENST00000524408.1
ENST00000526911.1
ENST00000531972.5
CDS GCA 90 bp GAGGGCAGGTTCTCATTAAGTGGCAGTTCATTCACTTTAAAGCACTaGAGCTTGAGACTTGCTGGAGCCCATCTATCACACTCTCACCTA +
Preference number: 5 (lower is better)
Translates to: EGRFSLSGSSFTLKH*SLRLAGAHLSHSHL
Trigger: TAGGTGAGAGTGTGATAGATGGGCTCCAGCAAGTCTCAAGCTGCAGTGCTTTAAAGTGAATGAACTGCCACTTAATGAGAACCTGCCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526628.5
ENST00000527969.1
ENST00000532084.5
CDS-3UTR CAA 90 bp TATCCAAATGTACAGTTTGAGGCAGAGTTAGGAATGGAACCCAGGGCCTCCTGGGCTGACGTTGTTGATTaGCCTAATGTAAAAGTCCCC +
Preference number: 5 (lower is better)
Translates to: YPNVQFEAELGMEPRASWADVVD*PNVKVP
Trigger: GGGGACTTTTACATTAGGCAAATCAACAACGTCAGC...CCAGGAGGCCCTGGGTTCCATTCCTAACTCTGCCTCAAACTGTACATTTGGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000307998.11
ENST00000524408.1
ENST00000526911.1
ENST00000531972.5
CDS GCA 72 bp GGCCCGCGGCTCTGGCGGCTCGGCTGGCTCGGGCAATaGCTGCGGGCAGACGGACGGGCGGACGGCACAGCT +
Preference number: 6 (lower is better)
Translates to: GPRLWRLGWLGQ*LRADGRADGTA
Trigger: AGCTGTGCCGTCCGCCCGTCCGTCTGCCCGCAGGCATTGCCCGAGCCAGCCGAGCCGCCAGAGCCGCGGGCC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000307998.11
ENST00000531972.5
ENST00000533347.5
CDS GCA 72 bp CGCGGCTCTGGCGGCTCGGCTGGCTCGGGCAATGCCTaGGGGCAGACGGACGGGCGGACGGCACAGCTCCCT +
Preference number: 6 (lower is better)
Translates to: RGSGGSAGSGNA*GQTDGRTAQLP
Trigger: AGGGAGCTGTGCCGTCCGCCCGTCCGTCTGCCCGCAGGCATTGCCCGAGCCAGCCGAGCCGCCAGAGCCGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000307998.11
ENST00000531972.5
ENST00000533347.5
CDS GCA 72 bp GGGGCTGCGAGATGGTGGACACGGGTCAGGGGCCTCTaGCCGCGGCACCTCAACTCCCTGTACCGGGAGCCC +
Preference number: 6 (lower is better)
Translates to: GAARWWTRVRGL*PRHLNSLYREP
Trigger: GGGCTCCCGGTACAGGGAGTTGAGGTGCCGCGGGCAGAGGCCCCTGACCCGTGTCCACCATCTCGCAGCCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526624.5
CDS GCA 72 bp GGGAGCATCCTGGGGGTGCGGGATGCCAGAGTCGGGTaGCAAGGCGCCTCCTCGACCTCCTCGCACCAGCGT +
Preference number: 6 (lower is better)
Translates to: GSILGVRDARVG*QGASSTSSHQR
Trigger: ACGCTGGTGCGAGGAGGTCGAGGAGGCGCCTTGGCACCCGACTCTGGCATCCCGCACCCCCAGGATGCTCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527378.1
CDS CCA 72 bp GAGACCCGGGTAGGCAGGAGGCGCAGGGGAGCATCCTaGGGCTGCGAGATGGTGGACACGGGTCAGGGGCCT +
Preference number: 6 (lower is better)
Translates to: ETRVGRRRRGAS*GCEMVDTGQGP
Trigger: AGGCCCCTGACCCGTGTCCACCATCTCGCAGCCCCAGGATGCTCCCCTGCGCCTCCTGCCTACCCGGGTCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526624.5
CDS GCA 72 bp CTGCCTCTCCTTGTGCCTCCCCCACTAGCCTGGGAGTaGTCCACAGCCAGCCGGGGTCGAGTACCCAGGAGG +
Preference number: 6 (lower is better)
Translates to: LPLLVPPPLAWE*STASRGRVPRR
Trigger: CCTCCTGGGTACTCGACCCCGGCTGGCTGTGGAGCACTCCCAGGCTAGTGGGGGAGGCACAAGGAGAGGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000526628.5
ENST00000527969.1
CDS CCA 72 bp TCCCACCCGGGCAACCTGTACCTTGGCAGAGGCGTGTaGCCAGCAGCTGGTAACCCTGTGGGCAGTGGCAGG +
Preference number: 6 (lower is better)
Translates to: SHPGNLYLGRGV*PAAGNPVGSGR
Trigger: CCTGCCACTGCCCACAGGGTTACCAGCTGCTGGCCACACGCCTCTGCCAAGGTACAGGTTGCCCGGGTGGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527969.1
CDS TCA 72 bp GGTTGGTGTCCACGCAGCGGTAGCCCCCATGGAAGTTaGCACAGGTTTGGGCCTCGGAGCACTGGTGCGCAC +
Preference number: 6 (lower is better)
Translates to: GWCPRSGSPHGS*HRFGPRSTGAH
Trigger: GTGCGCACCAGTGCTCCGAGGCCCAAACCTGTGTCAACTTCCATGGGGGCTACCGCTGCGTGGACACCAACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000307998.11
ENST00000525392.1
ENST00000526628.5
ENST00000528176.5
ENST00000528409.1
ENST00000530806.5
ENST00000531005.5
ENST00000531645.5
ENST00000531972.5
ENST00000532084.5
CDS CAA 72 bp TCCCCCTTGCAGGCCTCAGGGATGGTCAGACACTCGTaGACATCTGCAGAGAGGGGCCTGCTGGGCACAGCC +
Preference number: 6 (lower is better)
Translates to: SPLQASGMVRHS*TSAERGLLGTA
Trigger: GGCTGTGCCCAGCAGGCCCCTCTCTGCAGATGTCAACGAGTGTCTGACCATCCCTGAGGCCTGCAAGGGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531005.5
ENST00000533347.5
CDS TCA 72 bp CGGGGTCGAGTACCCAGGAGGCAGCTGGGTGCACAGTaGCAGGAGGCGGAGGCCTCAAATGGAGAACTGTGT +
Preference number: 6 (lower is better)
Translates to: RGRVPRRQLGAQ*QEAEASNGELC
Trigger: ACACAGTTCTCCATTTGAGGCCTCCGCCTCCTGTCACTGTGCACCCAGCTGCCTCCTGGGTACTCGACCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526628.5
ENST00000527969.1
CDS GCA 72 bp GCCAGACCAGGGACACAAAGCCGGGACTACAGAAGCTaGTTCCTGGACTCACCCACACACTCGGGCCCGATC +
Preference number: 6 (lower is better)
Translates to: ARPGTQSRDYRS*FLDSPTHSGPI
Trigger: GATCGGGCCCGAGTGTGTGGGTGAGTCCAGGAAGCAGCTTCTGTAGTCCCGGCTTTGTGTCCCTGGTCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527969.1
CDS CCA 72 bp GAACTGTGTGGCAGGAGGCACGGCATAGCTAGGGCCTaGGGGTCCACAGAGGAGTACACAGCAGGGATGGAG +
Preference number: 6 (lower is better)
Translates to: ELCGRRHGIARA*GSTEEYTAGME
Trigger: CTCCATCCCTGCTGTGTACTCCTCTGTGGACCCCCAGGCCCTAGCTATGCCGTGCCTCCTGCCACACAGTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000526628.5
ENST00000527969.1
CDS CCA 72 bp CTGTTCCCACTGTTGCCCTCATTCTCGGCCTGCAAGTaGGTCTCTATCCCTCCCCACGGCCCTAGCCCTAGC +
Preference number: 6 (lower is better)
Translates to: LFPLLPSFSACK*VSIPPHGPSPS
Trigger: GCTAGGGCTAGGGCCGTGGGGAGGGATAGAGACCCACTTGCAGGCCGAGAATGAGGGCAACAGTGGGAACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529870.1
ENST00000531005.5
CDS CAA 72 bp CACGCAGCGGTAGCCCCCATGGAAGTTGACACAGGTTaGGGCCTCGGAGCACTGGTGCGCACCAGACTCACA +
Preference number: 6 (lower is better)
Translates to: HAAVAPMEVDTG*GLGALVRTRLT
Trigger: TGTGAGTCTGGTGCGCACCAGTGCTCCGAGGCCCAAACCTGTGTCAACTTCCATGGGGGCTACCGCTGCGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 10 transcripts:
ENST00000307998.11
ENST00000525392.1
ENST00000526628.5
ENST00000528176.5
ENST00000528409.1
ENST00000530806.5
ENST00000531005.5
ENST00000531645.5
ENST00000531972.5
ENST00000532084.5
CDS CAA 90 bp GGGCTGCTGGGCTCCCACGGCAGTTCTTGGAGGTGGGGCTGTCCCTaGGAAAGCAGCTATCAATCCCTTTCCGGGTTCCTGGGGGTGTTT +
Preference number: 6 (lower is better)
Translates to: GLLGSHGSSWRWGCP*ESSYQSLSGFLGVF
Trigger: AAACACCCCCAGGAACCCGGAAAGGGATTGATAGCTGCTTTCCAAGGGACAGCCCCACCTCCAAGAACTGCCGTGGGAGCCCAGCAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000529870.1
ENST00000531005.5
CDS TCA 72 bp CCTGTGGGCAGTGGCAGGAGAAACGGCCTGGCTCGTTaGTGCAGCGGTACTGACAGAGGTAGCTGGAGTAGC +
Preference number: 6 (lower is better)
Translates to: PVGSGRRNGLAR*CSGTDRGSWSS
Trigger: GCTACTCCAGCTACCTCTGTCAGTACCGCTGCATCAACGAGCCAGGCCGTTTCTCCTGCCACTGCCCACAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307998.11
ENST00000526628.5
ENST00000527969.1
ENST00000528176.5
ENST00000531005.5
ENST00000531972.5
ENST00000532084.5
CDS GCA 72 bp GCTTCCTGGACTCACCCACACACTCGGGCCCGATCTTaGGGTAACCATCAGGGCAGGTGCACTGATAGGAGC +
Preference number: 6 (lower is better)
Translates to: ASWTHPHTRARS*GNHQGRCTDRS
Trigger: GCTCCTATCAGTGCACCTGCCCTGATGGTTACCGCAAGATCGGGCCCGAGTGTGTGGGTGAGTCCAGGAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527969.1
CDS GCA 72 bp GGCCAAGGCTGGAGATGGGGCAGCTGTTCCCACTGTTaGCCTCATTCTCGGCCTGCAAGTGGGTCTCTATCC +
Preference number: 6 (lower is better)
Translates to: GQGWRWGSCSHC*PHSRPASGSLS
Trigger: GGATAGAGACCCACTTGCAGGCCGAGAATGAGGGCAACAGTGGGAACAGCTGCCCCATCTCCAGCCTTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529870.1
ENST00000531005.5
CDS CAA 90 bp CACTTCATTTCCCCCTTGCAGGCCTCAGGGATGGTCAGACACTCGTaGACATCTGCAGAGAGGGGCCTGCTGGGCACAGCCAGTCTCCTG +
Preference number: 6 (lower is better)
Translates to: HFISPLQASGMVRHS*TSAERGLLGTASLL
Trigger: CAGGAGACTGGCTGTGCCCAGCAGGCCCCTCTCTGCAGATGTCAACGAGTGTCTGACCATCCCTGAGGCCTGCAAGGGGGAAATGAAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000531005.5
ENST00000533347.5
CDS TCA 72 bp TCTGGAACACGTCAGCGGGCACGCTCCGCTCCGAGGTaGTGGTCATGTAGCGGTGCACAATGGATGAAGGCT +
Preference number: 6 (lower is better)
Translates to: SGTRQRARSAPR*WSCSGAQWMKA
Trigger: AGCCTTCATCCATTGTGCACCGCTACATGACCATCACCTCGGAGCGGAGCGTGCCCGCTGACGTGTTCCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000307998.11
ENST00000525392.1
ENST00000526628.5
ENST00000528176.5
ENST00000528409.1
ENST00000531005.5
ENST00000531645.5
ENST00000531972.5
ENST00000532084.5
CDS CCA 72 bp CTGGTAACCCTGTGGGCAGTGGCAGGAGAAACGGCCTaGCTCGTTGATGCAGCGGTACTGACAGAGGTAGCT +
Preference number: 6 (lower is better)
Translates to: LVTLWAVAGETA*LVDAAVLTEVA
Trigger: AGCTACCTCTGTCAGTACCGCTGCATCAACGAGCCAGGCCGTTTCTCCTGCCACTGCCCACAGGGTTACCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000307998.11
ENST00000526628.5
ENST00000527969.1
ENST00000528176.5
ENST00000531005.5
ENST00000531972.5
ENST00000532084.5
CDS CCA 72 bp AACGGGCTGCTGGGCTCCCACGGCAGTTCTTGGAGGTaGGGCTGTCCCTTGGAAAGCAGCTATCAATCCCTT +
Preference number: 6 (lower is better)
Translates to: NGLLGSHGSSWR*GCPLESSYQSL
Trigger: AAGGGATTGATAGCTGCTTTCCAAGGGACAGCCCCACCTCCAAGAACTGCCGTGGGAGCCCAGCAGCCCGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529870.1
ENST00000531005.5
CDS CAA 72 bp GGCTCCCACGGCAGTTCTTGGAGGTGGGGCTGTCCCTaGGAAAGCAGCTATCAATCCCTTTCCGGGTTCCTG +
Preference number: 6 (lower is better)
Translates to: GSHGSSWRWGCP*ESSYQSLSGFL
Trigger: CAGGAACCCGGAAAGGGATTGATAGCTGCTTTCCAAGGGACAGCCCCACCTCCAAGAACTGCCGTGGGAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000529870.1
ENST00000531005.5
CDS TCA 72 bp TCTGGAACACGTCAGCGGGCACGCTCCGCTCCGAGGTaGTGGTCATGTAGCGGTGCACAATGGATGAAGGTT +
Preference number: 6 (lower is better)
Translates to: SGTRQRARSAPR*WSCSGAQWMKV
Trigger: AACCTTCATCCATTGTGCACCGCTACATGACCATCACCTCGGAGCGGAGCGTGCCCGCTGACGTGTTCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530806.5
CDS GCA 72 bp CAGAGGAGTACACAGCAGGGATGGAGCTCTCACCACTaGAGGAGAAGCCATCCCGATGCAGCTCATAGCCCT +
Preference number: 6 (lower is better)
Translates to: QRSTQQGWSSHH*RRSHPDAAHSP
Trigger: AGGGCTATGAGCTGCATCGGGATGGCTTCTCCTGCAGTGGTGAGAGCTCCATCCCTGCTGTGTACTCCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526628.5
ENST00000527969.1
CDS CCA 72 bp GCACAATGGATGAAGGCTGCTCTCGACATAGAGGGTTaGAGGCCGGGCAGAGACAGCGGTTCTCAGAGACCT +
Preference number: 6 (lower is better)
Translates to: AQWMKAALDIEG*RPGRDSGSQRP
Trigger: AGGTCTCTGAGAACCGCTGTCTCTGCCCGGCCTCCAACCCTCTATGTCGAGAGCAGCCTTCATCCATTGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000307998.11
ENST00000525392.1
ENST00000526628.5
ENST00000528176.5
ENST00000531005.5
ENST00000531645.5
ENST00000531972.5
ENST00000532084.5
CDS CCA 72 bp ACACTGATTCCTGGACTGTCCTTCCTCCAAGGCCTGTaGCTCCCAGGGGACAGACACTGGAAGGCAGACTTC +
Preference number: 6 (lower is better)
Translates to: TLIPGLSFLQGL*LPGDRHWKADF
Trigger: GAAGTCTGCCTTCCAGTGTCTGTCCCCTGGGAGCCACAGGCCTTGGAGGAAGGACAGTCCAGGAATCAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531005.5
CDS GCA 72 bp CGGGAGATGGAGGGTTCAAAGAAAGTTTGCCCAGGCTaGCGCAGCTCACAGACTTCTCTCTGCCCAGAACTC +
Preference number: 6 (lower is better)
Translates to: REMEGSKKVCPG*RSSQTSLCPEL
Trigger: GAGTTCTGGGCAGAGAGAAGTCTGTGAGCTGCGGCAGCCTGGGCAAACTTTCTTTGAACCCTCCATCTCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527969.1
CDS GCA 72 bp CGGGAGATGGAGGGTTCAAAGAAAGTTTGCCCAGGCTaGCGCAGCTCACAGACTTCTCTCTGCCCAGAACTG +
Preference number: 6 (lower is better)
Translates to: REMEGSKKVCPG*RSSQTSLCPEL
Trigger: CAGTTCTGGGCAGAGAGAAGTCTGTGAGCTGCGGCAGCCTGGGCAAACTTTCTTTGAACCCTCCATCTCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526628.5
CDS CCA 72 bp AGGGGGATGAGACAAGCCACAAGTTCAGCCGGGAGATaGAGGGTTCAAAGAAAGTTTGCCCAGGCTGCCGCA +
Preference number: 6 (lower is better)
Translates to: RGMRQATSSAGR*RVQRKFAQAAA
Trigger: TGCGGCAGCCTGGGCAAACTTTCTTTGAACCCTCCATCTCCCGGCTGAACTTGTGGCTTGTCTCATCCCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000526628.5
ENST00000527969.1
CDS CCA 72 bp GGCCACCTGCGGCAGGTCCTAAACAACATGAGTGTCTaGATGAGGGTGTGGACATCACCAGTGGCCCTTTTG +
Preference number: 6 (lower is better)
Translates to: GHLRQVLNNMSV*MRVWTSPVALL
Trigger: CAAAAGGGCCACTGGTGATGTCCACACCCTCATCCAGACACTCATGTTGTTTAGGACCTGCCGCAGGTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531005.5
CDS CAA 90 bp GACAAGCCACAAGTTCAGCCGGGAGATGGAGGGTTCAAAGAAAGTTaGCCCAGGCTGCCGCAGCTCACAGACTTCTCTCTGCCCAGAACT +
Preference number: 6 (lower is better)
Translates to: DKPQVQPGDGGFKES*PRLPQLTDFSLPRT
Trigger: AGTTCTGGGCAGAGAGAAGTCTGTGAGCTGCGGCAGCCTGGGCAAACTTTCTTTGAACCCTCCATCTCCCGGCTGAACTTGTGGCTTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526628.5
ENST00000527969.1
CDS TCA 72 bp AAGGCTTCACCACCCATAATCCTGTGTCCGAGGAGCTaGATTAGGCAGGGTCAGCCAGGACACCTCCCAAAC +
Preference number: 6 (lower is better)
Translates to: KASPPIILCPRS*IRQGQPGHLPN
Trigger: GTTTGGGAGGTGTCCTGGCTGACCCTGCCTAATTCAGCTCCTCGGACACAGGATTATGGGTGGTGAAGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527969.1
CDS TCA 72 bp AGTGGTTCAGAGAAGGCGTACAGGATCCAGCTCCTCTaGGGGGTAGGGACAAGGTTTCCTGGGTTTCTGGGA +
Preference number: 6 (lower is better)
Translates to: SGSEKAYRIQLL*GVGTRFPGFLG
Trigger: TCCCAGAAACCCAGGAAACCTTGTCCCTACCCCTCAGAGGAGCTGGATCCTGTACGCCTTCTCTGAACCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000529870.1
ENST00000531005.5
CDS GCA 72 bp AAGTTCAGCCGGGAGATGGAGGGTTCAAAGAAAGTTTaGCCAGGCTGCCGCAGCTCACAGACTTCTCTCTGC +
Preference number: 6 (lower is better)
Translates to: KFSREMEGSKKV*PGCRSSQTSLC
Trigger: GCAGAGAGAAGTCTGTGAGCTGCGGCAGCCTGGGCAAACTTTCTTTGAACCCTCCATCTCCCGGCTGAACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526628.5
ENST00000527969.1
CDS CCA 72 bp GACGCTACCCTCCCAGGTTGTGATGAGACAAAGAGCTaGGACAGGAGAGTGGTTCAGAGAAGGCGTACAGGA +
Preference number: 6 (lower is better)
Translates to: DATLPGCDETKS*DRRVVQRRRTG
Trigger: TCCTGTACGCCTTCTCTGAACCACTCTCCTGTCCCAGCTCTTTGTCTCATCACAACCTGGGAGGGTAGCGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000529870.1
ENST00000531005.5
CDS CAA 72 bp CAAGTTCAGCCGGGAGATGGAGGGTTCAAAGAAAGTTaGCCCAGGCTGCCGCAGCTCACAGACTTCTCTCTG +
Preference number: 6 (lower is better)
Translates to: QVQPGDGGFKES*PRLPQLTDFSL
Trigger: CAGAGAGAAGTCTGTGAGCTGCGGCAGCCTGGGCAAACTTTCTTTGAACCCTCCATCTCCCGGCTGAACTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526628.5
ENST00000527969.1
CDS TCA 72 bp GGAAATAAGGTCCTGTCCAAACATCCCCAGCAACACTaGTTCCTGGACTGTCCTTCCTCCAAGGCCTGTGGC +
Preference number: 6 (lower is better)
Translates to: GNKVLSKHPQQH*FLDCPSSKACG
Trigger: GCCACAGGCCTTGGAGGAAGGACAGTCCAGGAATCAGTGTTGCTGGGGATGTTTGGACAGGACCTTATTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531005.5
CDS TCA 72 bp TCAGCCCCTGCCTGGGATCCCGCACACCACCCAACATaGCAGATAGTTCCAACACTTGTATTCGGTTCTCTC +
Preference number: 6 (lower is better)
Translates to: SAPAWDPAHHPT*QIVPTLVFGSL
Trigger: GAGAGAACCGAATACAAGTGTTGGAACTATCTGTCATGTTGGGTGGTGTGCGGGATCCCAGGCAGGGGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531005.5
CDS CCA 72 bp CAATTCCTGCAACCCACAGTCAACCTGAGCACCCAGTaGTCACCTCCAACTAACTGTGAGCTTCACAGGCAG +
Preference number: 6 (lower is better)
Translates to: QFLQPTVNLSTQ*SPPTNCELHRQ
Trigger: CTGCCTGTGAAGCTCACAGTTAGTTGGAGGTGACCACTGGGTGCTCAGGTTGACTGTGGGTTGCAGGAATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526628.5
CDS CCA 72 bp CAGGTCCTAAACAACATGAGTGTCTGGATGAGGGTGTaGACATCACCAGTGGCCCTTTTGAGCTGGGGAGGA +
Preference number: 6 (lower is better)
Translates to: QVLNNMSVWMRV*TSPVALLSWGG
Trigger: TCCTCCCCAGCTCAAAAGGGCCACTGGTGATGTCCACACCCTCATCCAGACACTCATGTTGTTTAGGACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531005.5
CDS CCA 72 bp CATAGCAGCCTGGCCGAGTTCCCCCTTAAGGCGTCCTaGAGTTCAGTTTTAGATTGTGCATGTCAGTTGAGG +
Preference number: 6 (lower is better)
Translates to: HSSLAEFPLKAS*SSVLDCACQLR
Trigger: CCTCAACTGACATGCACAATCTAAAACTGAACTCCAGGACGCCTTAAGGGGGAACTCGGCCAGGCTGCTATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525392.1
CDS GCA 72 bp CCTCATCCCGCAGCAAAGCATAACATAGGGGGTACATaGCAGTTTACAGGGTGTAAGAAGTCTGGGATCCAG +
Preference number: 6 (lower is better)
Translates to: PHPAAKHNIGGT*QFTGCKKSGIQ
Trigger: CTGGATCCCAGACTTCTTACACCCTGTAAACTGGCATGTACCCCCTATGTTATGCTTTGCTGCGGGATGAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526628.5
CDS CCA 72 bp ATTCAAATGCAGGTAAATGCAGGTGAGCCTGATATGTaGGACAGGTGGCACCCACATCCTCAGTCTCACCAG +
Preference number: 6 (lower is better)
Translates to: IQMQVNAGEPDM*DRWHPHPQSHQ
Trigger: CTGGTGAGACTGAGGATGTGGGTGCCACCTGTCCCACATATCAGGCTCACCTGCATTTACCTGCATTTGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000526628.5
ENST00000527969.1
CDS CAA 72 bp GAGTGTGTTAGACTAGATGAGTCTTATGGGTCTGGCTaGTGCTGTAACGCCCAATTCCTGCAACCCACAGTC +
Preference number: 6 (lower is better)
Translates to: ECVRLDESYGSG*CCNAQFLQPTV
Trigger: GACTGTGGGTTGCAGGAATTGGGCGTTACAGCACAAGCCAGACCCATAAGACTCATCTAGTCTAACACACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526628.5
CDS GCA 72 bp TGTGTTAGACTAGATGAGTCTTATGGGTCTGGCTTGTaGTGTAACGCCCAATTCCTGCAACCCACAGTCAAC +
Preference number: 6 (lower is better)
Translates to: CVRLDESYGSGL*CNAQFLQPTVN
Trigger: GTTGACTGTGGGTTGCAGGAATTGGGCGTTACAGCACAAGCCAGACCCATAAGACTCATCTAGTCTAACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526628.5
CDS CAA 90 bp TCCTCATTTTGTAGAGGAAGGAGAAAATCATACCTCCTAGGATTCTaGAGAGGAAGGAGGCCAAGTGTGTCAGGGAATACACTACGAGGG +
Preference number: 6 (lower is better)
Translates to: SSFCRGRRKSYLLGF*RGRRPSVSGNTLRG
Trigger: CCCTCGTAGTGTATTCCCTGACACACTTGGCCTCCTTCCTCTCAAGAATCCTAGGAGGTATGATTTTCTCCTTCCTCTACAAAATGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526628.5
CDS GCA 72 bp TTCTCATTAAGTGGCAGTTCATTCACTTTAAAGCACTaGAGCTTGAGACTTGCTGGAGCCCATCTATCACAC +
Preference number: 6 (lower is better)
Translates to: FSLSGSSFTLKH*SLRLAGAHLSH
Trigger: GTGTGATAGATGGGCTCCAGCAAGTCTCAAGCTGCAGTGCTTTAAAGTGAATGAACTGCCACTTAATGAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000526628.5
ENST00000527969.1
ENST00000532084.5