Pregenerated sensors for EFCAB9 (Homo sapiens)
Ensembl gene IDs: ENSG00000214360Ensembl transcript IDs: ENST00000398186.5
Found 20 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | TTAGACATGTTAACAGTCTTCATCAATGTTCATGTTCTGTACTTTCAGATCCCAGGTGGGCCAGCAGCATaGACACCAGCATGTAGAACT | + |
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Preference number: 4 (lower is better) Translates to: LDMLTVFINVHVLYFQIPGGPAA*TPACRT Trigger: AGTTCTACATGCTGGTGTGCATGCTGCTGGCCCACC...TGGGATCTGAAAGTACAGAACATGAACATTGATGAAGACTGTTAACATGTCTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398186.5 |
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| CDS-3UTR CCA 90 bp | TTAGACATGTTAACAGTCTTCATCAATGTTCATGTTCTGTACTTTCAGATCCCATCCAAATGGTTCTGGTaGGCCAGCAGCATGCACACC | + |
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Preference number: 4 (lower is better) Translates to: LDMLTVFINVHVLYFQIPSKWFW*ASSMHT Trigger: GGTGTGCATGCTGCTGGCCCACCAGAACCATTTGGA...TGGGATCTGAAAGTACAGAACATGAACATTGATGAAGACTGTTAACATGTCTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398186.5 |
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| CDS-3UTR CCA 90 bp | TTAGACATGTTAACAGTCTTCATCAATGTTCATGTTCTGTACTTTCAGATCCCACCTTCCAAATGGTTCTaGTGGGCCAGCAGCATGCAC | + |
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Preference number: 4 (lower is better) Translates to: LDMLTVFINVHVLYFQIPPSKWF*WASSMH Trigger: GTGCATGCTGCTGGCCCACCAGAACCATTTGGAAGG...TGGGATCTGAAAGTACAGAACATGAACATTGATGAAGACTGTTAACATGTCTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398186.5 |
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| CDS-3UTR CCA 90 bp | TTAGACATGTTAACAGTCTTCATCAATGTTCATGTTCTGTACTTTCAGATCCCAAACTGTCCTTCCAAATaGTTCTGGTGGGCCAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: LDMLTVFINVHVLYFQIPNCPSK*FWWASS Trigger: GCTGCTGGCCCACCAGAACCATTTGGAAGGACAGTT...TGGGATCTGAAAGTACAGAACATGAACATTGATGAAGACTGTTAACATGTCTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398186.5 |
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| CDS-3UTR TCA 90 bp | TTAGACATGTTAACAGTCTTCATCAATGTTCATGTTCTGTACTTTCAGATCCCAAAGACAGGCCGGGAATaGCGATACATAAACTGTCCT | + |
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Preference number: 4 (lower is better) Translates to: LDMLTVFINVHVLYFQIPKTGRE*RYINCP Trigger: AGGACAGTTTATGTATCGTCATTCCCGGCCTGTCTT...TGGGATCTGAAAGTACAGAACATGAACATTGATGAAGACTGTTAACATGTCTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398186.5 |
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| CDS-3UTR GCA 90 bp | TTAGACATGTTAACAGTCTTCATCAATGTTCATGTTCTGTACTTTCAGATCCCACATTCAAGGTGTTCTTaGCGTGCACGTCCAGAATAT | + |
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Preference number: 4 (lower is better) Translates to: LDMLTVFINVHVLYFQIPHSRCS*RARPEY Trigger: ATATTCTGGACGTGCACGGCAAGAACACCTTGAATG...TGGGATCTGAAAGTACAGAACATGAACATTGATGAAGACTGTTAACATGTCTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398186.5 |
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| CDS-3UTR TCA 90 bp | TTAGACATGTTAACAGTCTTCATCAATGTTCATGTTCTGTACTTTCAGATCCCATGCACGTCCAGAATATaGAAATATTCTGCCAAAGCC | + |
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Preference number: 4 (lower is better) Translates to: LDMLTVFINVHVLYFQIPCTSRI*KYSAKA Trigger: GGCTTTGGCAGAATATTTTCATATTCTGGACGTGCA...TGGGATCTGAAAGTACAGAACATGAACATTGATGAAGACTGTTAACATGTCTAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398186.5 |
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| CDS-3UTR TCA 90 bp | TTAGACATGTTAACAGTCTTCATCAATGTTCATGTTCTGTACTTTCAGATCCCATGTCAAACACAATGTTaGTCTGTGCCTTTTTCAAGT | + |
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Preference number: 4 (lower is better) Translates to: LDMLTVFINVHVLYFQIPCQTQC*SVPFSS Trigger: ACTTGAAAAAGGCACAGATCAACATTGTGTTTGACA...TGGGATCTGAAAGTACAGAACATGAACATTGATGAAGACTGTTAACATGTCTAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000398186.5 |
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| CDS-3UTR TCA 90 bp | TTAGACATGTTAACAGTCTTCATCAATGTTCATGTTCTGTACTTTCAGATCCCACACGGAAGAGATCTTTaGGTTCCTGTTTTTGAATAT | + |
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Preference number: 4 (lower is better) Translates to: LDMLTVFINVHVLYFQIPHGRDL*VPVFEY Trigger: ATATTCAAAAACAGGAACTCAAAGATCTCTTCCGTG...TGGGATCTGAAAGTACAGAACATGAACATTGATGAAGACTGTTAACATGTCTAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000398186.5 |
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| CDS-3UTR TCA 90 bp | TTAGACATGTTAACAGTCTTCATCAATGTTCATGTTCTGTACTTTCAGATCCCACTTGATGTGACATTTTaGGTAGAGACTTCTCTTTCT | + |
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Preference number: 4 (lower is better) Translates to: LDMLTVFINVHVLYFQIPLDVTF*VETSLS Trigger: AGAAAGAGAAGTCTCTACTCAAAATGTCACATCAAG...TGGGATCTGAAAGTACAGAACATGAACATTGATGAAGACTGTTAACATGTCTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398186.5 |
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| CDS-3UTR TCA 90 bp | TTAGACATGTTAACAGTCTTCATCAATGTTCATGTTCTGTACTTTCAGATCCCACAGCTTGTATCTACTTaGTGTGACATTTTGAGTAGA | + |
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Preference number: 4 (lower is better) Translates to: LDMLTVFINVHVLYFQIPQLVST*CDILSR Trigger: TCTACTCAAAATGTCACATCAAGTAGATACAAGCTG...TGGGATCTGAAAGTACAGAACATGAACATTGATGAAGACTGTTAACATGTCTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398186.5 |
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| CDS TCA 90 bp | CTCAGATCCCCTTTCAGGTCAAGCAGGTCAAAGACAGGCCGGGAATaGCGATACATAAACTGTCCTTCCAAATGGTTCTGGTGGGCCAGC | + |
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Preference number: 5 (lower is better) Translates to: LRSPFRSSRSKTGRE*RYINCPSKWFWWAS Trigger: GCTGGCCCACCAGAACCATTTGGAAGGACAGTTTATGTATCGTCATTCCCGGCCTGTCTTTGACCTGCTTGACCTGAAAGGGGATCTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000398186.5 |
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| CDS-3UTR CAA 90 bp | TTAGACATGTTAACAGTCTTCATCAATGTTCATGTTCTGTACTTTCAGATCCCATCATTCAAGGTGTTCTaGCCGTGCACGTCCAGAATA | + |
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Preference number: 5 (lower is better) Translates to: LDMLTVFINVHVLYFQIPSFKVF*PCTSRI Trigger: TATTCTGGACGTGCACGGCAAGAACACCTTGAATGA...TGGGATCTGAAAGTACAGAACATGAACATTGATGAAGACTGTTAACATGTCTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398186.5 |
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| CDS-3UTR CAA 90 bp | TTAGACATGTTAACAGTCTTCATCAATGTTCATGTTCTGTACTTTCAGATCCCAACATTTCGAAGTTTTTaGCACCAATTCTCAGATCCC | + |
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Preference number: 5 (lower is better) Translates to: LDMLTVFINVHVLYFQIPTFRSF*HQFSDP Trigger: GGGATCTGAGAATTGGTGCAAAAAACTTCGAAATGT...TGGGATCTGAAAGTACAGAACATGAACATTGATGAAGACTGTTAACATGTCTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000398186.5 |
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| CDS-3UTR CAA 90 bp | TTAGACATGTTAACAGTCTTCATCAATGTTCATGTTCTGTACTTTCAGATCCCACAAGACTCTTTCAGCTaGTATCTACTTGATGTGACA | + |
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Preference number: 5 (lower is better) Translates to: LDMLTVFINVHVLYFQIPQDSFS*YLLDVT Trigger: TGTCACATCAAGTAGATACAAGCTGAAAGAGTCTTG...TGGGATCTGAAAGTACAGAACATGAACATTGATGAAGACTGTTAACATGTCTAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398186.5 |
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| CDS-3UTR CAA 90 bp | TTAGACATGTTAACAGTCTTCATCAATGTTCATGTTCTGTACTTTCAGATCCCAATGTCAAACACAATGTaGATCTGTGCCTTTTTCAAG | + |
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Preference number: 5 (lower is better) Translates to: LDMLTVFINVHVLYFQIPMSNTM*ICAFFK Trigger: CTTGAAAAAGGCACAGATCAACATTGTGTTTGACAT...TGGGATCTGAAAGTACAGAACATGAACATTGATGAAGACTGTTAACATGTCTAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000398186.5 |
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| CDS GCA 72 bp | ACTGTCCTTCCAAATGGTTCTGGTGGGCCAGCAGCATaGACACCAGCATGTAGAACTTCTCAAAGTCGATCT | + |
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Preference number: 6 (lower is better) Translates to: TVLPNGSGGPAA*TPACRTSQSRS Trigger: AGATCGACTTTGAGAAGTTCTACATGCTGGTGTGCATGCTGCTGGCCCACCAGAACCATTTGGAAGGACAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398186.5 |
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| CDS TCA 72 bp | CCTTTCAGGTCAAGCAGGTCAAAGACAGGCCGGGAATaGCGATACATAAACTGTCCTTCCAAATGGTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: PFRSSRSKTGRE*RYINCPSKWFW Trigger: CCAGAACCATTTGGAAGGACAGTTTATGTATCGTCATTCCCGGCCTGTCTTTGACCTGCTTGACCTGAAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398186.5 |
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| CDS TCA 72 bp | TCATTCAAGGTGTTCTTGCCGTGCACGTCCAGAATATaGAAATATTCTGCCAAAGCCTTCACGTTTCTCACG | + |
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Preference number: 6 (lower is better) Translates to: SFKVFLPCTSRI*KYSAKAFTFLT Trigger: CGTGAGAAACGTGAAGGCTTTGGCAGAATATTTTCATATTCTGGACGTGCACGGCAAGAACACCTTGAATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000398186.5 |
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| CDS TCA 72 bp | CCACAGCGTTCCAGTCCAGCATGTCAAACACAATGTTaGTCTGTGCCTTTTTCAAGTCAGTCACATGATGAA | + |
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Preference number: 6 (lower is better) Translates to: PQRSSPACQTQC*SVPFSSQSHDE Trigger: TTCATCATGTGACTGACTTGAAAAAGGCACAGATCAACATTGTGTTTGACATGCTGGACTGGAACGCTGTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000398186.5 |
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