Pregenerated sensors for EFCAB7 (Homo sapiens)
Ensembl gene IDs: ENSG00000203965Ensembl transcript IDs: ENST00000371088.5, ENST00000460678.6, ENST00000461039.1, ENST00000480886.1, ENST00000496956.1
Found 23 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | TCGCAGCTGGACAGATCTCGGCCTTTCTCTAATCACCATGGCAACTaGACCTCACCGCCACCGGAAATAAGATGCAGAGCCCTTCTCCAA | + |
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Preference number: 5 (lower is better) Translates to: SQLDRSRPFSNHHGN*TSPPPEIRCRALLQ Trigger: TTGGAGAAGGGCTCTGCATCTTATTTCCGGTGGCGGTGAGGTGCAGTTGCCATGGTGATTAGAGAAAGGCCGAGATCTGTCCAGCTGCGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000480886.1 |
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| CDS GCA 90 bp | TCACCCATCCCTTCCAGCACCATACACCCACAAGGCTTACTCCCTTaGCTTCTGTGGAAGACAGCAAAAATGGCTGTCCCCCTCAGTATC | + |
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Preference number: 5 (lower is better) Translates to: SPIPSSTIHPQGLLP*LLWKTAKMAVPLSI Trigger: GATACTGAGGGGGACAGCCATTTTTGCTGTCTTCCACAGAAGGCAAGGGAGTAAGCCTTGTGGGTGTATGGTGCTGGAAGGGATGGGTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000460678.6 |
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| CDS TCA 90 bp | GATGGGTCCCTTTCAGGGGACCCTTCGATGTGGTTTCCAAACTGGTaGCGCATCAATTTACTGTCAACCTCTAGTTTTTCTAGTGTAGTC | + |
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Preference number: 5 (lower is better) Translates to: DGSLSGDPSMWFPNW*RINLLSTSSFSSVV Trigger: GACTACACTAGAAAAACTAGAGGTTGACAGTAAATTGATGCGTCACCAGTTTGGAAACCACATCGAAGGGTCCCCTGAAAGGGACCCATC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000371088.5 |
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| CDS TCA 90 bp | CTCGGACTGGGGTTTCAAGAAAGACTTTATGGAAGAAGTGACAACTaGGATAAAAGACAATGGCCTCTAGGATGGATAGGGAGCAAGGGA | + |
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Preference number: 5 (lower is better) Translates to: LGLGFQERLYGRSDN*DKRQWPLGWIGSKG Trigger: TCCCTTGCTCCCTATCCATCCTAGAGGCCATTGTCTTTTATCTCAGTTGTCACTTCTTCCATAAAGTCTTTCTTGAAACCCCAGTCCGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000461039.1 |
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| CDS CCA 90 bp | TATACAAGGCAGTATCAACGGATAACCAAGGGGATGGTTTTCCTGTaGTGGAGCACACGAGGAAGAGATGCCAGACATCTATGTGAAAAA | + |
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Preference number: 5 (lower is better) Translates to: YTRQYQRITKGMVFL*WSTRGRDARHLCEK Trigger: TTTTTCACATAGATGTCTGGCATCTCTTCCTCGTGTGCTCCACCACAGGAAAACCATCCCCTTGGTTATCCGTTGATACTGCCTTGTATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000460678.6 |
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| CDS GCA 72 bp | GACAGATCTCGGCCTTTCTCTAATCACCATGGCAACTaGACCTCACCGCCACCGGAAATAAGATGCAGAGCC | + |
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Preference number: 6 (lower is better) Translates to: DRSRPFSNHHGN*TSPPPEIRCRA Trigger: GGCTCTGCATCTTATTTCCGGTGGCGGTGAGGTGCAGTTGCCATGGTGATTAGAGAAAGGCCGAGATCTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000480886.1 |
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| CDS CCA 72 bp | TTCTCTTCGGCGATTCAGCGTTCCTCTCACCGCAGCTaGACAGATCTCGGCCTTTCTCTAATCACCATGGCA | + |
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Preference number: 6 (lower is better) Translates to: FSSAIQRSSHRS*TDLGLSLITMA Trigger: TGCCATGGTGATTAGAGAAAGGCCGAGATCTGTCCAGCTGCGGTGAGAGGAACGCTGAATCGCCGAAGAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371088.5 |
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| CDS CCA 72 bp | CAGTATCAACGGATAACCAAGGGGATGGTTTTCCTGTaGTGGAGCACACGAGGAAGAGATGCCAGACATCTA | + |
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Preference number: 6 (lower is better) Translates to: QYQRITKGMVFL*WSTRGRDARHL Trigger: TAGATGTCTGGCATCTCTTCCTCGTGTGCTCCACCACAGGAAAACCATCCCCTTGGTTATCCGTTGATACTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000460678.6 |
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| CDS CCA 72 bp | TATCAACGGATAACCAAGGGGATGGTTTTCCTGTGGTaGAGCACACGAGGAAGAGATGCCAGACATCTATGT | + |
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Preference number: 6 (lower is better) Translates to: YQRITKGMVFLW*STRGRDARHLC Trigger: ACATAGATGTCTGGCATCTCTTCCTCGTGTGCTCCACCACAGGAAAACCATCCCCTTGGTTATCCGTTGATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000460678.6 |
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| CDS CAA 72 bp | CATCCTTCAGTGCTCAAATCCCATATCACAGTTCCCTaGCCCCTCGTAACAAATCCTTCCCCAACCTCTATG | + |
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Preference number: 6 (lower is better) Translates to: HPSVLKSHITVP*PLVTNPSPTSM Trigger: CATAGAGGTTGGGGAAGGATTTGTTACGAGGGGCAAGGGAACTGTGATATGGGATTTGAGCACTGAAGGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000461039.1 |
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| CDS TCA 72 bp | CTTAGGAATCACCCTCTGAGGCATGATTGGTCCATTTaGAAACTGCAATCTACTAGGTGGGGACCCAAGCTT | + |
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Preference number: 6 (lower is better) Translates to: LRNHPLRHDWSI*KLQSTRWGPKL Trigger: AAGCTTGGGTCCCCACCTAGTAGATTGCAGTTTTCAAATGGACCAATCATGCCTCAGAGGGTGATTCCTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000461039.1 |
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| CDS CAA 90 bp | AATCCTAGTCATCCTTCAGTGCTCAAATCCCATATCACAGTTCCCTaGCCCCTCGTAACAAATCCTTCCCCAACCTCTATGGTCCAAATT | + |
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Preference number: 6 (lower is better) Translates to: NPSHPSVLKSHITVP*PLVTNPSPTSMVQI Trigger: AATTTGGACCATAGAGGTTGGGGAAGGATTTGTTACGAGGGGCAAGGGAACTGTGATATGGGATTTGAGCACTGAAGGATGACTAGGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000461039.1 |
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| CDS TCA 72 bp | TTCTTTGTTCGAGGACTCTCTGAAGGTGTTGATTTCTaGCTGGAGAAAGTTGCATCGCTTCGTGGACTGATC | + |
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Preference number: 6 (lower is better) Translates to: FFVRGLSEGVDF*LEKVASLRGLI Trigger: GATCAGTCCACGAAGCGATGCAACTTTCTCCAGTCAGAAATCAACACCTTCAGAGAGTCCTCGAACAAAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000371088.5 ENST00000480886.1 |
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| CDS GCA 72 bp | TGTTCTTTTAACACCAGTACACTCTCACAGAGCCTCTaGACAGAGTATTCTGTCTACCTGGAATACTCTGCC | + |
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Preference number: 6 (lower is better) Translates to: CSFNTSTLSQSL*TEYSVYLEYSA Trigger: GGCAGAGTATTCCAGGTAGACAGAATACTCTGTGCAGAGGCTCTGTGAGAGTGTACTGGTGTTAAAAGAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000460678.6 |
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| CDS CAA 90 bp | GGCATCACCGTTGCTAAGAACAGATTTACAAATGGCCTTCTCAAGTaGTCCACTACATGCCTCCATATGGACAGCTTTAATTTTTGGCTT | + |
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Preference number: 6 (lower is better) Translates to: GITVAKNRFTNGLLK*STTCLHMDSFNFWL Trigger: AAGCCAAAAATTAAAGCTGTCCATATGGAGGCATGTAGTGGACAACTTGAGAAGGCCATTTGTAAATCTGTTCTTAGCAACGGTGATGCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000371088.5 ENST00000460678.6 ENST00000461039.1 |
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| CDS CAA 72 bp | CACTCTTTCCTTTATACTTCATATATACCCTTCGCCTaGTTTCGCCTTACACTGTTTCCCCTGCTTCTAAAG | + |
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Preference number: 6 (lower is better) Translates to: HSFLYTSYIPFA*FRLTLFPLLLK Trigger: CTTTAGAAGCAGGGGAAACAGTGTAAGGCGAAACAAGGCGAAGGGTATATATGAAGTATAAAGGAAAGAGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000461039.1 |
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| CDS CAA 90 bp | AGATATTCTCACTCTTTCCTTTATACTTCATATATACCCTTCGCCTaGTTTCGCCTTACACTGTTTCCCCTGCTTCTAAAGGCTGTCTGT | + |
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Preference number: 6 (lower is better) Translates to: RYSHSFLYTSYIPFA*FRLTLFPLLLKAVC Trigger: ACAGACAGCCTTTAGAAGCAGGGGAAACAGTGTAAGGCGAAACAAGGCGAAGGGTATATATGAAGTATAAAGGAAAGAGTGAGAATATCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000461039.1 |
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| CDS GCA 72 bp | AGATTTACAAATGGCCTTCTCAAGTTGTCCACTACATaGCTCCATATGGACAGCTTTAATTTTTGGCTTGCA | + |
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Preference number: 6 (lower is better) Translates to: RFTNGLLKLSTT*LHMDSFNFWLA Trigger: TGCAAGCCAAAAATTAAAGCTGTCCATATGGAGGCATGTAGTGGACAACTTGAGAAGGCCATTTGTAAATCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000371088.5 ENST00000460678.6 ENST00000461039.1 |
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| CDS CAA 72 bp | GTTGCTAAGAACAGATTTACAAATGGCCTTCTCAAGTaGTCCACTACATGCCTCCATATGGACAGCTTTAAT | + |
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Preference number: 6 (lower is better) Translates to: VAKNRFTNGLLK*STTCLHMDSFN Trigger: ATTAAAGCTGTCCATATGGAGGCATGTAGTGGACAACTTGAGAAGGCCATTTGTAAATCTGTTCTTAGCAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000371088.5 ENST00000460678.6 ENST00000461039.1 |
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| CDS CAA 72 bp | GGTCCCACTTCTACTGCAAATATGTTGAGTCCTCTGTaGTTTATGCAGTTTTTACTTAGCTCATTGCTGATG | + |
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Preference number: 6 (lower is better) Translates to: GPTSTANMLSPL*FMQFLLSSLLM Trigger: CATCAGCAATGAGCTAAGTAAAAACTGCATAAACAACAGAGGACTCAACATATTTGCAGTAGAAGTGGGACC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000371088.5 ENST00000460678.6 ENST00000461039.1 |
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| CDS TCA 72 bp | ACACAAGCTGTAGATTTGCTTGACTCTCATTTTCCTTaGGAATATACAAGGCAGTATCAACGGATAACCAAG | + |
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Preference number: 6 (lower is better) Translates to: TQAVDLLDSHFP*EYTRQYQRITK Trigger: CTTGGTTATCCGTTGATACTGCCTTGTATATTCTCAAGGAAAATGAGAGTCAAGCAAATCTACAGCTTGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000371088.5 ENST00000460678.6 ENST00000496956.1 |
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| CDS GCA 72 bp | TTGACAAACCATTGTAGATTTGGGTCCCACTTCTACTaGAAATATGTTGAGTCCTCTGTTGTTTATGCAGTT | + |
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Preference number: 6 (lower is better) Translates to: LTNHCRFGSHFY*KYVESSVVYAV Trigger: AACTGCATAAACAACAGAGGACTCAACATATTTGCAGTAGAAGTGGGACCCAAATCTACAATGGTTTGTCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000371088.5 ENST00000461039.1 |
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| CDS CCA 72 bp | CTTACTTACCTTTTAATCTTCATTCCCAGGGTATTATaGACACTAGGGTCACATTATTTCATCCTTGACTTA | + |
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Preference number: 6 (lower is better) Translates to: LTYLLIFIPRVL*TLGSHYFILDL Trigger: TAAGTCAAGGATGAAATAATGTGACCCTAGTGTCCATAATACCCTGGGAATGAAGATTAAAAGGTAAGTAAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000461039.1 |
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