Pregenerated sensors for EFCAB6-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000261251Ensembl transcript IDs: ENST00000563715.1, ENST00000564696.1
Found 42 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | TCCCGTCCTCACCGGCTGTCTCCTCGAGCAGACAAGCGGACCCAGTaGGACCCGCTACGTGGTGGCACAATGCGAGTCCCCATGACTGCT | + |
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Preference number: 5 (lower is better) Translates to: SRPHRLSPRADKRTQ*DPLRGGTMRVPMTA Trigger: AGCAGTCATGGGGACTCGCATTGTGCCACCACGTAGCGGGTCTCACTGGGTCCGCTTGTCTGCTCGAGGAGACAGCCGGTGAGGACGGGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000563715.1 ENST00000564696.1 |
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| CDS TCA 90 bp | GGACCCAGTGAGACCCGCTACGTGGTGGCACAATGCGAGTCCCCATaGCTGCTCACCCTAACGAAGGCGCAGGATGCGGTAGGGGCTTTG | + |
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Preference number: 5 (lower is better) Translates to: GPSETRYVVAQCESP*LLTLTKAQDAVGAL Trigger: CAAAGCCCCTACCGCATCCTGCGCCTTCGTTAGGGTGAGCAGTCATGGGGACTCGCATTGTGCCACCACGTAGCGGGTCTCACTGGGTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000563715.1 ENST00000564696.1 |
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| CDS GCA 90 bp | ACAATGCGAGTCCCCATGACTGCTCACCCTAACGAAGGCGCAGGATaGGGTAGGGGCTTTGCGGACCTCACTGCAGCCAATCCTGACCAC | + |
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Preference number: 5 (lower is better) Translates to: TMRVPMTAHPNEGAG*GRGFADLTAANPDH Trigger: GTGGTCAGGATTGGCTGCAGTGAGGTCCGCAAAGCCCCTACCGCATCCTGCGCCTTCGTTAGGGTGAGCAGTCATGGGGACTCGCATTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000563715.1 ENST00000564696.1 |
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| CDS TCA 90 bp | GGAAAACCCTCTGGATTGAAGATGATTGTGGGTATGGGCGGAGGCTaGGGTTACAGCCTGGGCAAAGCAGGCCAGCTCCCGTCCTCACCG | + |
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Preference number: 5 (lower is better) Translates to: GKPSGLKMIVGMGGG*GYSLGKAGQLPSSP Trigger: CGGTGAGGACGGGAGCTGGCCTGCTTTGCCCAGGCTGTAACCTCAGCCTCCGCCCATACCCACAATCATCTTCAATCCAGAGGGTTTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563715.1 |
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| CDS TCA 90 bp | CGAATATCAATGGAATGGATGCTTACTGTGGGTATGGGCGGAGGCTaGGGTTACAGCCTGGGCAAAGCAGGCCAGCTCCCGTCCTCACCG | + |
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Preference number: 5 (lower is better) Translates to: RISMEWMLTVGMGGG*GYSLGKAGQLPSSP Trigger: CGGTGAGGACGGGAGCTGGCCTGCTTTGCCCAGGCTGTAACCTCAGCCTCCGCCCATACCCACAGTAAGCATCCATTCCATTGATATTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564696.1 |
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| CDS CCA 90 bp | GGCTTTGCGGACCTCACTGCAGCCAATCCTGACCACAGGCCCCAGTaGGCACGCTTAGCCTTTTACAGATGCAGAGTCTGCTTCTCAGAG | + |
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Preference number: 5 (lower is better) Translates to: GFADLTAANPDHRPQ*ARLAFYRCRVCFSE Trigger: CTCTGAGAAGCAGACTCTGCATCTGTAAAAGGCTAAGCGTGCCCACTGGGGCCTGTGGTCAGGATTGGCTGCAGTGAGGTCCGCAAAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000563715.1 ENST00000564696.1 |
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| CDS CCA 90 bp | GGAAAAGGTAGGACCCTCACCCACCAAATCCAGGCTTCAGCCTGTTaGAAGTGGACCCACTGCAGGGCACCTAAGGGAACCATCAATGTC | + |
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Preference number: 5 (lower is better) Translates to: GKGRTLTHQIQASAC*KWTHCRAPKGTINV Trigger: GACATTGATGGTTCCCTTAGGTGCCCTGCAGTGGGTCCACTTCCAACAGGCTGAAGCCTGGATTTGGTGGGTGAGGGTCCTACCTTTTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563715.1 |
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| CDS TCA 90 bp | GACCGCATAGTATCCATCTTTGCAGCACACACCAGGGCACCTAATTaGCCTGCCGCAGCCATGTGTGCAAGGAATTCCAAGCTGCACACG | + |
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Preference number: 5 (lower is better) Translates to: DRIVSIFAAHTRAPN*PAAAMCARNSKLHT Trigger: CGTGTGCAGCTTGGAATTCCTTGCACACATGGCTGCGGCAGGTCAATTAGGTGCCCTGGTGTGTGCTGCAAAGATGGATACTATGCGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564696.1 |
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| CDS CCA 90 bp | CACTCATTTAGCGAATATCAATGGAATGGATGCTTACTGTGGGTATaGGCGGAGGCTGAGGTTACAGCCTGGGCAAAGCAGGCCAGCTCC | + |
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Preference number: 5 (lower is better) Translates to: HSFSEYQWNGCLLWV*AEAEVTAWAKQASS Trigger: GGAGCTGGCCTGCTTTGCCCAGGCTGTAACCTCAGCCTCCGCCCATACCCACAGTAAGCATCCATTCCATTGATATTCGCTAAATGAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564696.1 |
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| CDS CCA 90 bp | TCTGCACATGGAGGTGAGACGTTTCCTGGAACAAGGAAAACCCTCTaGATTGAAGATGATTGTGGGTATGGGCGGAGGCTGAGGTTACAG | + |
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Preference number: 5 (lower is better) Translates to: SAHGGETFPGTRKTL*IEDDCGYGRRLRLQ Trigger: CTGTAACCTCAGCCTCCGCCCATACCCACAATCATCTTCAATCCAGAGGGTTTTCCTTGTTCCAGGAAACGTCTCACCTCCATGTGCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563715.1 |
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| CDS CCA 90 bp | CTAAGAGCAAGCTCCATAGGTTCTCATTCTGCTCCTACCCCTGACTaGCAGTGTGTCCTTGAACAAAATGCTCTGTGTGCCTCAGTTACC | + |
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Preference number: 5 (lower is better) Translates to: LRASSIGSHSAPTPD*QCVLEQNALCASVT Trigger: GGTAACTGAGGCACACAGAGCATTTTGTTCAAGGACACACTGCCAGTCAGGGGTAGGAGCAGAATGAGAACCTATGGAGCTTGCTCTTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564696.1 |
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| CDS GCA 90 bp | GTCTTAGTAATAATTCACTCATTTAGCGAATATCAATGGAATGGATaGTTACTGTGGGTATGGGCGGAGGCTGAGGTTACAGCCTGGGCA | + |
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Preference number: 5 (lower is better) Translates to: VLVIIHSFSEYQWNG*LLWVWAEAEVTAWA Trigger: TGCCCAGGCTGTAACCTCAGCCTCCGCCCATACCCACAGTAAGCATCCATTCCATTGATATTCGCTAAATGAGTGAATTATTACTAAGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564696.1 |
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| CDS CCA 90 bp | CGGCCCTCTGTCTTAGTAATAATTCACTCATTTAGCGAATATCAATaGAATGGATGCTTACTGTGGGTATGGGCGGAGGCTGAGGTTACA | + |
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Preference number: 5 (lower is better) Translates to: RPSVLVIIHSFSEYQ*NGCLLWVWAEAEVT Trigger: TGTAACCTCAGCCTCCGCCCATACCCACAGTAAGCATCCATTCCATTGATATTCGCTAAATGAGTGAATTATTACTAAGACAGAGGGCCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564696.1 |
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| CDS CCA 90 bp | CTCCATAGGGTCAGCGACAACAATTACATTCACTCACGTGATTTATaGCGCTTCCACTCGGCCCTCTGTCTTAGTAATAATTCACTCATT | + |
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Preference number: 5 (lower is better) Translates to: LHRVSDNNYIHSRDL*RFHSALCLSNNSLI Trigger: AATGAGTGAATTATTACTAAGACAGAGGGCCGAGTGGAAGCGCCATAAATCACGTGAGTGAATGTAATTGTTGTCGCTGACCCTATGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564696.1 |
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| CDS GCA 72 bp | AGCAGGGGGCTGACTTCCCCCGGCTACACGGCCCTATaGAGTTCGGTGGGACCGGGCCGACCGCCCAGCTCG | + |
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Preference number: 6 (lower is better) Translates to: SRGLTSPGYTAL*SSVGPGRPPSS Trigger: CGAGCTGGGCGGTCGGCCCGGTCCCACCGAACTGCATAGGGCCGTGTAGCCGGGGGAAGTCAGCCCCCTGCT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000563715.1 ENST00000564696.1 |
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| CDS TCA 72 bp | CACCGGCTGTCTCCTCGAGCAGACAAGCGGACCCAGTaGGACCCGCTACGTGGTGGCACAATGCGAGTCCCC | + |
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Preference number: 6 (lower is better) Translates to: HRLSPRADKRTQ*DPLRGGTMRVP Trigger: GGGGACTCGCATTGTGCCACCACGTAGCGGGTCTCACTGGGTCCGCTTGTCTGCTCGAGGAGACAGCCGGTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000563715.1 ENST00000564696.1 |
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| CDS CCA 72 bp | TTACTGTGGGTATGGGCGGAGGCTGAGGTTACAGCCTaGGCAAAGCAGGCCAGCTCCCGTCCTCACCGGCTG | + |
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Preference number: 6 (lower is better) Translates to: LLWVWAEAEVTA*AKQASSRPHRL Trigger: CAGCCGGTGAGGACGGGAGCTGGCCTGCTTTGCCCAGGCTGTAACCTCAGCCTCCGCCCATACCCACAGTAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564696.1 |
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| CDS CCA 72 bp | TCGAGCAGACAAGCGGACCCAGTGAGACCCGCTACGTaGTGGCACAATGCGAGTCCCCATGACTGCTCACCC | + |
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Preference number: 6 (lower is better) Translates to: SSRQADPVRPAT*WHNASPHDCSP Trigger: GGGTGAGCAGTCATGGGGACTCGCATTGTGCCACCACGTAGCGGGTCTCACTGGGTCCGCTTGTCTGCTCGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000563715.1 ENST00000564696.1 |
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| CDS CAA 72 bp | CTCACCCTAACGAAGGCGCAGGATGCGGTAGGGGCTTaGCGGACCTCACTGCAGCCAATCCTGACCACAGGC | + |
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Preference number: 6 (lower is better) Translates to: LTLTKAQDAVGA*RTSLQPILTTG Trigger: GCCTGTGGTCAGGATTGGCTGCAGTGAGGTCCGCAAAGCCCCTACCGCATCCTGCGCCTTCGTTAGGGTGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000563715.1 ENST00000564696.1 |
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| CDS TCA 72 bp | GAGACCCGCTACGTGGTGGCACAATGCGAGTCCCCATaGCTGCTCACCCTAACGAAGGCGCAGGATGCGGTA | + |
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Preference number: 6 (lower is better) Translates to: ETRYVVAQCESP*LLTLTKAQDAV Trigger: TACCGCATCCTGCGCCTTCGTTAGGGTGAGCAGTCATGGGGACTCGCATTGTGCCACCACGTAGCGGGTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000563715.1 ENST00000564696.1 |
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| CDS GCA 72 bp | GTCCCCATGACTGCTCACCCTAACGAAGGCGCAGGATaGGGTAGGGGCTTTGCGGACCTCACTGCAGCCAAT | + |
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Preference number: 6 (lower is better) Translates to: VPMTAHPNEGAG*GRGFADLTAAN Trigger: ATTGGCTGCAGTGAGGTCCGCAAAGCCCCTACCGCATCCTGCGCCTTCGTTAGGGTGAGCAGTCATGGGGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000563715.1 ENST00000564696.1 |
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| CDS TCA 72 bp | ATGGAATGGATGCTTACTGTGGGTATGGGCGGAGGCTaGGGTTACAGCCTGGGCAAAGCAGGCCAGCTCCCG | + |
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Preference number: 6 (lower is better) Translates to: MEWMLTVGMGGG*GYSLGKAGQLP Trigger: CGGGAGCTGGCCTGCTTTGCCCAGGCTGTAACCTCAGCCTCCGCCCATACCCACAGTAAGCATCCATTCCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564696.1 |
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| CDS GCA 72 bp | GACCTGCCGCAGCCATGTGTGCAAGGAATTCCAAGCTaGACACGTCTGCCTGGCTGCTTCTCTCCCACAGTG | + |
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Preference number: 6 (lower is better) Translates to: DLPQPCVQGIPS*TRLPGCFSPTV Trigger: CACTGTGGGAGAGAAGCAGCCAGGCAGACGTGTGCAGCTTGGAATTCCTTGCACACATGGCTGCGGCAGGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564696.1 |
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| CDS TCA 72 bp | TCTGGATTGAAGATGATTGTGGGTATGGGCGGAGGCTaGGGTTACAGCCTGGGCAAAGCAGGCCAGCTCCCG | + |
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Preference number: 6 (lower is better) Translates to: SGLKMIVGMGGG*GYSLGKAGQLP Trigger: CGGGAGCTGGCCTGCTTTGCCCAGGCTGTAACCTCAGCCTCCGCCCATACCCACAATCATCTTCAATCCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563715.1 |
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| CDS CCA 72 bp | GACCTCACTGCAGCCAATCCTGACCACAGGCCCCAGTaGGCACGCTTAGCCTTTTACAGATGCAGAGTCTGC | + |
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Preference number: 6 (lower is better) Translates to: DLTAANPDHRPQ*ARLAFYRCRVC Trigger: GCAGACTCTGCATCTGTAAAAGGCTAAGCGTGCCCACTGGGGCCTGTGGTCAGGATTGGCTGCAGTGAGGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000563715.1 ENST00000564696.1 |
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| CDS GCA 72 bp | GGCTGCTTCTCTCCCACAGTGAGCAGTGTGGCAGGGTaGCTAAGAGCAAGCTCCATAGGTTCTCATTCTGCT | + |
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Preference number: 6 (lower is better) Translates to: GCFSPTVSSVAG*LRASSIGSHSA Trigger: AGCAGAATGAGAACCTATGGAGCTTGCTCTTAGGCACCCTGCCACACTGCTCACTGTGGGAGAGAAGCAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564696.1 |
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| CDS GCA 72 bp | CAAATCCAGGCTTCAGCCTGTTGGAAGTGGACCCACTaGAGGGCACCTAAGGGAACCATCAATGTCTTCTGG | + |
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Preference number: 6 (lower is better) Translates to: QIQASACWKWTH*RAPKGTINVFW Trigger: CCAGAAGACATTGATGGTTCCCTTAGGTGCCCTGCAGTGGGTCCACTTCCAACAGGCTGAAGCCTGGATTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563715.1 |
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| CDS TCA 72 bp | GTATCCATCTTTGCAGCACACACCAGGGCACCTAATTaGCCTGCCGCAGCCATGTGTGCAAGGAATTCCAAG | + |
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Preference number: 6 (lower is better) Translates to: VSIFAAHTRAPN*PAAAMCARNSK Trigger: CTTGGAATTCCTTGCACACATGGCTGCGGCAGGTCAATTAGGTGCCCTGGTGTGTGCTGCAAAGATGGATAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564696.1 |
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| CDS CCA 72 bp | GGAGGTGAGACGTTTCCTGGAACAAGGAAAACCCTCTaGATTGAAGATGATTGTGGGTATGGGCGGAGGCTG | + |
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Preference number: 6 (lower is better) Translates to: GGETFPGTRKTL*IEDDCGYGRRL Trigger: CAGCCTCCGCCCATACCCACAATCATCTTCAATCCAGAGGGTTTTCCTTGTTCCAGGAAACGTCTCACCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563715.1 |
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| CDS CCA 72 bp | AGCTCCATAGGTTCTCATTCTGCTCCTACCCCTGACTaGCAGTGTGTCCTTGAACAAAATGCTCTGTGTGCC | + |
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Preference number: 6 (lower is better) Translates to: SSIGSHSAPTPD*QCVLEQNALCA Trigger: GGCACACAGAGCATTTTGTTCAAGGACACACTGCCAGTCAGGGGTAGGAGCAGAATGAGAACCTATGGAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564696.1 |
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| CDS CAA 72 bp | CAGAGAAGACAACAATCTCCTCCTACAAACTGTTCCTaGGGGCCACTGTCACATTATACAACTCTGGTCTGT | + |
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Preference number: 6 (lower is better) Translates to: QRRQQSPPTNCS*GPLSHYTTLVC Trigger: ACAGACCAGAGTTGTATAATGTGACAGTGGCCCCAAGGAACAGTTTGTAGGAGGAGATTGTTGTCTTCTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000563715.1 |
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| CDS CCA 72 bp | AGAGAAGACAACAATCTCCTCCTACAAACTGTTCCTTaGGGCCACTGTCACATTATACAACTCTGGTCTGTT | + |
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Preference number: 6 (lower is better) Translates to: REDNNLLLQTVP*GHCHIIQLWSV Trigger: AACAGACCAGAGTTGTATAATGTGACAGTGGCCCCAAGGAACAGTTTGTAGGAGGAGATTGTTGTCTTCTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000563715.1 |
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| CDS CCA 72 bp | GTCAGCGACAACAATTACATTCACTCACGTGATTTATaGCGCTTCCACTCGGCCCTCTGTCTTAGTAATAAT | + |
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Preference number: 6 (lower is better) Translates to: VSDNNYIHSRDL*RFHSALCLSNN Trigger: ATTATTACTAAGACAGAGGGCCGAGTGGAAGCGCCATAAATCACGTGAGTGAATGTAATTGTTGTCGCTGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564696.1 |
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| CDS GCA 72 bp | ATAATTCACTCATTTAGCGAATATCAATGGAATGGATaGTTACTGTGGGTATGGGCGGAGGCTGAGGTTACA | + |
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Preference number: 6 (lower is better) Translates to: IIHSFSEYQWNG*LLWVWAEAEVT Trigger: TGTAACCTCAGCCTCCGCCCATACCCACAGTAAGCATCCATTCCATTGATATTCGCTAAATGAGTGAATTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564696.1 |
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| CDS CCA 72 bp | GGGCAGTTTTCTATTTTTGCAGATCTCTTTAACATCTaGCTTAGTACAAGACCGCTGGATCTCTTACCTTCT | + |
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Preference number: 6 (lower is better) Translates to: GQFSIFADLFNI*LSTRPLDLLPS Trigger: AGAAGGTAAGAGATCCAGCGGTCTTGTACTAAGCCAGATGTTAAAGAGATCTGCAAAAATAGAAAACTGCCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000564696.1 |
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| CDS CCA 72 bp | CAGATCTCTTTAACATCTGGCTTAGTACAAGACCGCTaGATCTCTTACCTTCTTTTGCATTCAATTTGTTGC | + |
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Preference number: 6 (lower is better) Translates to: QISLTSGLVQDR*ISYLLLHSICC Trigger: GCAACAAATTGAATGCAAAAGAAGGTAAGAGATCCAGCGGTCTTGTACTAAGCCAGATGTTAAAGAGATCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564696.1 |
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| CDS CAA 90 bp | TTAACATCTGGCTTAGTACAAGACCGCTGGATCTCTTACCTTCTTTaGCATTCAATTTGTTGCAATATCACACATCATGTAGCTTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: LTSGLVQDRWISYLL*HSICCNITHHVASG Trigger: TCCAGAAGCTACATGATGTGTGATATTGCAACAAATTGAATGCAAAAGAAGGTAAGAGATCCAGCGGTCTTGTACTAAGCCAGATGTTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564696.1 |
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| CDS GCA 72 bp | AAAGAGGCGATGAATGCCAAAGTGATTGTGAAGGAGTaGATTCCATTCTTATGCATTACATTTTCTCAATGG | + |
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Preference number: 6 (lower is better) Translates to: KEAMNAKVIVKE*IPFLCITFSQW Trigger: CCATTGAGAAAATGTAATGCATAAGAATGGAATGCACTCCTTCACAATCACTTTGGCATTCATCGCCTCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564696.1 |
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| CDS GCA 72 bp | CGCTGGATCTCTTACCTTCTTTTGCATTCAATTTGTTaGAATATCACACATCATGTAGCTTCTGGAAAATCC | + |
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Preference number: 6 (lower is better) Translates to: RWISYLLLHSIC*NITHHVASGKS Trigger: GGATTTTCCAGAAGCTACATGATGTGTGATATTGCAACAAATTGAATGCAAAAGAAGGTAAGAGATCCAGCG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564696.1 |
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| CDS CAA 72 bp | CCGCTGGATCTCTTACCTTCTTTTGCATTCAATTTGTaGCAATATCACACATCATGTAGCTTCTGGAAAATC | + |
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Preference number: 6 (lower is better) Translates to: PLDLLPSFAFNL*QYHTSCSFWKI Trigger: GATTTTCCAGAAGCTACATGATGTGTGATATTGCAACAAATTGAATGCAAAAGAAGGTAAGAGATCCAGCGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000564696.1 |
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| CDS CAA 72 bp | AGACCGCTGGATCTCTTACCTTCTTTTGCATTCAATTaGTTGCAATATCACACATCATGTAGCTTCTGGAAA | + |
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Preference number: 6 (lower is better) Translates to: RPLDLLPSFAFN*LQYHTSCSFWK Trigger: TTTCCAGAAGCTACATGATGTGTGATATTGCAACAAATTGAATGCAAAAGAAGGTAAGAGATCCAGCGGTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000564696.1 |
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| CDS CAA 72 bp | GGCTTAGTACAAGACCGCTGGATCTCTTACCTTCTTTaGCATTCAATTTGTTGCAATATCACACATCATGTA | + |
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Preference number: 6 (lower is better) Translates to: GLVQDRWISYLL*HSICCNITHHV Trigger: TACATGATGTGTGATATTGCAACAAATTGAATGCAAAAGAAGGTAAGAGATCCAGCGGTCTTGTACTAAGCC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000564696.1 |
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