Pregenerated sensors for EFCAB3 (Homo sapiens)
Ensembl gene IDs: ENSG00000172421Ensembl transcript IDs: ENST00000305286.8, ENST00000450662.7, ENST00000518576.1, ENST00000520404.5, ENST00000635817.2, ENST00000636041.1
Found 30 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GTCTGTTGGAGTTTGCTGGAGGGTCCACTCCAGACCCTGTTTGCCTaGGTATCACCAGCGGAGGCCTCAGTTGGTAGTTGGGTAATGAGT | + |
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Preference number: 5 (lower is better) Translates to: VCWSLLEGPLQTLFA*VSPAEASVGSWVMS Trigger: ACTCATTACCCAACTACCAACTGAGGCCTCCGCTGGTGATACCCAGGCAAACAGGGTCTGGAGTGGACCCTCCAGCAAACTCCAACAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635817.2 |
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| CDS GCA 90 bp | TTCCTTCTATCATTCAGGTCCCTCAGCTGCAGGTCTGTTGGAGTTTaGTGGAGGGTCCACTCCAGACCCTGTTTGCCTGGGTATCACCAG | + |
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Preference number: 5 (lower is better) Translates to: FLLSFRSLSCRSVGV*WRVHSRPCLPGYHQ Trigger: CTGGTGATACCCAGGCAAACAGGGTCTGGAGTGGACCCTCCAGCAAACTCCAACAGACCTGCAGCTGAGGGACCTGAATGATAGAAGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635817.2 |
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| CDS GCA 90 bp | CCTTTCTGTTTGTTAGTTTTCCTTCTATCATTCAGGTCCCTCAGCTaGAGGTCTGTTGGAGTTTGCTGGAGGGTCCACTCCAGACCCTGT | + |
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Preference number: 5 (lower is better) Translates to: PFCLLVFLLSFRSLS*RSVGVCWRVHSRPC Trigger: ACAGGGTCTGGAGTGGACCCTCCAGCAAACTCCAACAGACCTGCAGCTGAGGGACCTGAATGATAGAAGGAAAACTAACAAACAGAAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635817.2 |
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| CDS CCA 90 bp | ACCCTGTTTGCCTGGGTATCACCAGCGGAGGCCTCAGTTGGTAGTTaGGTAATGAGTTCCTCAAGTTCCTCATCCTTGATTTTAGTTCCC | + |
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Preference number: 5 (lower is better) Translates to: TLFAWVSPAEASVGS*VMSSSSSSSLILVP Trigger: GGGAACTAAAATCAAGGATGAGGAACTTGAGGAACTCATTACCCAACTACCAACTGAGGCCTCCGCTGGTGATACCCAGGCAAACAGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635817.2 |
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| CDS TCA 90 bp | TTTCATTATTGCAATCCGGGCAGCATTAGCAAAGGCAGCCATGCTTaGGCTTGGAGGTGTGCATATGTCTGGCTTAAGTGTCCTTTTTCC | + |
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Preference number: 5 (lower is better) Translates to: FHYCNPGSISKGSHA*AWRCAYVWLKCPFS Trigger: GGAAAAAGGACACTTAAGCCAGACATATGCACACCTCCAAGCTCAAGCATGGCTGCCTTTGCTAATGCTGCCCGGATTGCAATAATGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000305286.8 ENST00000450662.7 ENST00000636041.1 |
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| CDS TCA 90 bp | CAATTTGTCAAAGTCATTCTCCGTCCAGCTTTGTTCAGTTGCTGGTaGGGAGCTGCAATCCTTTGGAGGAGAAGACGTGCTCTGGTTTTT | + |
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Preference number: 5 (lower is better) Translates to: QFVKVILRPALFSCW*GAAILWRRRRALVF Trigger: AAAAACCAGAGCACGTCTTCTCCTCCAAAGGATTGCAGCTCCTCACCAGCAACTGAACAAAGCTGGACGGAGAATGACTTTGACAAATTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635817.2 |
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| CDS GCA 90 bp | TCTCTAGAAGCCTTGATAGGATTTCAAACAATAGGATTCCTGGGTTaGCAGCCAAATCTAAACAGGTCTCCTTTTCTGGAACCACTGCCT | + |
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Preference number: 5 (lower is better) Translates to: SLEALIGFQTIGFLG*QPNLNRSPFLEPLP Trigger: AGGCAGTGGTTCCAGAAAAGGAGACCTGTTTAGATTTGGCTGGCAACCCAGGAATCCTATTGTTTGAAATCCTATCAAGGCTTCTAGAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000305286.8 ENST00000450662.7 ENST00000518576.1 ENST00000520404.5 ENST00000636041.1 |
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| CDS GCA 90 bp | AGCTGGGAACACCAGAATGGCTCAACAATTCAGGCATTTGAAAGGTaGTGTGAAATCATCCCCATACCTCAAAATAATCATTTCTTTAAA | + |
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Preference number: 5 (lower is better) Translates to: SWEHQNGSTIQAFER*CEIIPIPQNNHFFK Trigger: TTTAAAGAAATGATTATTTTGAGGTATGGGGATGATTTCACAGCACCTTTCAAATGCCTGAATTGTTGAGCCATTCTGGTGTTCCCAGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000518576.1 |
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| CDS CCA 72 bp | AGTTTGCTGGAGGGTCCACTCCAGACCCTGTTTGCCTaGGTATCACCAGCGGAGGCCTCAGTTGGTAGTTGG | + |
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Preference number: 6 (lower is better) Translates to: SLLEGPLQTLFA*VSPAEASVGSW Trigger: CCAACTACCAACTGAGGCCTCCGCTGGTGATACCCAGGCAAACAGGGTCTGGAGTGGACCCTCCAGCAAACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635817.2 |
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| CDS CAA 72 bp | GTTGGAGTTTGCTGGAGGGTCCACTCCAGACCCTGTTaGCCTGGGTATCACCAGCGGAGGCCTCAGTTGGTA | + |
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Preference number: 6 (lower is better) Translates to: VGVCWRVHSRPC*PGYHQRRPQLV Trigger: TACCAACTGAGGCCTCCGCTGGTGATACCCAGGCAAACAGGGTCTGGAGTGGACCCTCCAGCAAACTCCAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635817.2 |
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| CDS CCA 72 bp | CCTTCTATCATTCAGGTCCCTCAGCTGCAGGTCTGTTaGAGTTTGCTGGAGGGTCCACTCCAGACCCTGTTT | + |
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Preference number: 6 (lower is better) Translates to: PSIIQVPQLQVC*SLLEGPLQTLF Trigger: AAACAGGGTCTGGAGTGGACCCTCCAGCAAACTCCAACAGACCTGCAGCTGAGGGACCTGAATGATAGAAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635817.2 |
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| CDS CAA 90 bp | TTTCCTTCTATCATTCAGGTCCCTCAGCTGCAGGTCTGTTGGAGTTaGCTGGAGGGTCCACTCCAGACCCTGTTTGCCTGGGTATCACCA | + |
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Preference number: 6 (lower is better) Translates to: FPSIIQVPQLQVCWS*LEGPLQTLFAWVSP Trigger: TGGTGATACCCAGGCAAACAGGGTCTGGAGTGGACCCTCCAGCAAACTCCAACAGACCTGCAGCTGAGGGACCTGAATGATAGAAGGAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635817.2 |
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| CDS TCA 72 bp | TGCAATCCGGGCAGCATTAGCAAAGGCAGCCATGCTTaGGCTTGGAGGTGTGCATATGTCTGGCTTAAGTGT | + |
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Preference number: 6 (lower is better) Translates to: CNPGSISKGSHA*AWRCAYVWLKC Trigger: ACACTTAAGCCAGACATATGCACACCTCCAAGCTCAAGCATGGCTGCCTTTGCTAATGCTGCCCGGATTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000305286.8 ENST00000450662.7 ENST00000636041.1 |
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| CDS GCA 72 bp | GCCATGTGGCCAGTGACTCTGTCTACTTTTAAGCCGTaGTACCTACCACTTCTGGGCTTCAATCAGATCAGG | + |
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Preference number: 6 (lower is better) Translates to: AMWPVTLSTFKP*YLPLLGFNQIR Trigger: CCTGATCTGATTGAAGCCCAGAAGTGGTAGGTAGCACGGCTTAAAAGTAGACAGAGTCACTGGCCACATGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305286.8 |
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| CDS GCA 72 bp | TCTCCGTCCAGCTTTGTTCAGTTGCTGGTGAGGAGCTaGAATCCTTTGGAGGAGAAGACGTGCTCTGGTTTT | + |
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Preference number: 6 (lower is better) Translates to: SPSSFVQLLVRS*NPLEEKTCSGF Trigger: AAAACCAGAGCACGTCTTCTCCTCCAAAGGATTGCAGCTCCTCACCAGCAACTGAACAAAGCTGGACGGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635817.2 |
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| CDS CCA 72 bp | GCCTGGGTATCACCAGCGGAGGCCTCAGTTGGTAGTTaGGTAATGAGTTCCTCAAGTTCCTCATCCTTGATT | + |
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Preference number: 6 (lower is better) Translates to: AWVSPAEASVGS*VMSSSSSSSLI Trigger: AATCAAGGATGAGGAACTTGAGGAACTCATTACCCAACTACCAACTGAGGCCTCCGCTGGTGATACCCAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635817.2 |
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| CDS TCA 72 bp | AAAGTCATTCTCCGTCCAGCTTTGTTCAGTTGCTGGTaGGGAGCTGCAATCCTTTGGAGGAGAAGACGTGCT | + |
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Preference number: 6 (lower is better) Translates to: KVILRPALFSCW*GAAILWRRRRA Trigger: AGCACGTCTTCTCCTCCAAAGGATTGCAGCTCCTCACCAGCAACTGAACAAAGCTGGACGGAGAATGACTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635817.2 |
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| CDS CAA 90 bp | CTTCTGTCAATTTGTCAAAGTCATTCTCCGTCCAGCTTTGTTCAGTaGCTGGTGAGGAGCTGCAATCCTTTGGAGGAGAAGACGTGCTCT | + |
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Preference number: 6 (lower is better) Translates to: LLSICQSHSPSSFVQ*LVRSCNPLEEKTCS Trigger: AGAGCACGTCTTCTCCTCCAAAGGATTGCAGCTCCTCACCAGCAACTGAACAAAGCTGGACGGAGAATGACTTTGACAAATTGACAGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635817.2 |
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| CDS CAA 72 bp | ATTTGTCAAAGTCATTCTCCGTCCAGCTTTGTTCAGTaGCTGGTGAGGAGCTGCAATCCTTTGGAGGAGAAG | + |
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Preference number: 6 (lower is better) Translates to: ICQSHSPSSFVQ*LVRSCNPLEEK Trigger: CTTCTCCTCCAAAGGATTGCAGCTCCTCACCAGCAACTGAACAAAGCTGGACGGAGAATGACTTTGACAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635817.2 |
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| CDS CAA 90 bp | GTCTCTAGAAGCCTTGATAGGATTTCAAACAATAGGATTCCTGGGTaGCCAGCCAAATCTAAACAGGTCTCCTTTTCTGGAACCACTGCC | + |
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Preference number: 6 (lower is better) Translates to: VSRSLDRISNNRIPG*PAKSKQVSFSGTTA Trigger: GGCAGTGGTTCCAGAAAAGGAGACCTGTTTAGATTTGGCTGGCAACCCAGGAATCCTATTGTTTGAAATCCTATCAAGGCTTCTAGAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000305286.8 ENST00000450662.7 ENST00000518576.1 ENST00000520404.5 ENST00000636041.1 |
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| CDS CCA 72 bp | TTCAGGTCAACTGCTGTCTCACCCTCAGTTGGTAGTTaGGTAATGAGTTCCTCAAGTTCCTCATCCTTGATT | + |
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Preference number: 6 (lower is better) Translates to: FRSTAVSPSVGS*VMSSSSSSSLI Trigger: AATCAAGGATGAGGAACTTGAGGAACTCATTACCCAACTACCAACTGAGGGTGAGACAGCAGTTGACCTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000636041.1 |
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| CDS CAA 72 bp | GTTTTGACCCTTGGCCCGTTGAGGGCCTTCACACCTTaGAGCAATCTATTCTTATATACCTTTCCATGCGAA | + |
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Preference number: 6 (lower is better) Translates to: VLTLGPLRAFTP*SNLFLYTFPCE Trigger: TTCGCATGGAAAGGTATATAAGAATAGATTGCTCAAAGGTGTGAAGGCCCTCAACGGGCCAAGGGTCAAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635817.2 |
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| CDS GCA 72 bp | GCCTTGATAGGATTTCAAACAATAGGATTCCTGGGTTaGCAGCCAAATCTAAACAGGTCTCCTTTTCTGGAA | + |
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Preference number: 6 (lower is better) Translates to: ALIGFQTIGFLG*QPNLNRSPFLE Trigger: TTCCAGAAAAGGAGACCTGTTTAGATTTGGCTGGCAACCCAGGAATCCTATTGTTTGAAATCCTATCAAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000305286.8 ENST00000450662.7 ENST00000518576.1 ENST00000520404.5 ENST00000636041.1 |
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| CDS CAA 72 bp | AGCCTTGATAGGATTTCAAACAATAGGATTCCTGGGTaGCCAGCCAAATCTAAACAGGTCTCCTTTTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: SLDRISNNRIPG*PAKSKQVSFSG Trigger: TCCAGAAAAGGAGACCTGTTTAGATTTGGCTGGCAACCCAGGAATCCTATTGTTTGAAATCCTATCAAGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000305286.8 ENST00000450662.7 ENST00000518576.1 ENST00000520404.5 ENST00000636041.1 |
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| CDS CAA 90 bp | GAGAAGTTTGTTATTACTGACCTTCTGAAGCCTACTTCTGTCAATTaGTCAAAGTCATTCTCCGTCCAGCTTTGTTCAGTTGCTGGTGAG | + |
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Preference number: 6 (lower is better) Translates to: EKFVITDLLKPTSVN*SKSFSVQLCSVAGE Trigger: CTCACCAGCAACTGAACAAAGCTGGACGGAGAATGACTTTGACAAATTGACAGAAGTAGGCTTCAGAAGGTCAGTAATAACAAACTTCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635817.2 |
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| CDS CCA 72 bp | ATCTACCTTTGGTCTTTGATGTTGGTGACCTACAGATaGGGTTTTGGTGTAGATGACCTTTTCGTTGATGTT | + |
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Preference number: 6 (lower is better) Translates to: IYLWSLMLVTYR*GFGVDDLFVDV Trigger: AACATCAACGAAAAGGTCATCTACACCAAAACCCCATCTGTAGGTCACCAACATCAAAGACCAAAGGTAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000635817.2 |
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| CDS CAA 72 bp | GACCTTTTCGTTGATGTTGACGCTATTCCTTTCTGTTaGTTAGTTTTCCTTCTATCATTCAGGTCCCTCAGC | + |
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Preference number: 6 (lower is better) Translates to: DLFVDVDAIPFC*LVFLLSFRSLS Trigger: GCTGAGGGACCTGAATGATAGAAGGAAAACTAACAAACAGAAAGGAATAGCGTCAACATCAACGAAAAGGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000635817.2 |
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| CDS CAA 90 bp | TCTGGAACCACTGCCTTGAGGAAGAGATTCTTATCTGTTAGAACCTaGATAAAGTCTGAGAAGTTCACCTTCCCATCTCGATCAATATCA | + |
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Preference number: 6 (lower is better) Translates to: SGTTALRKRFLSVRT*IKSEKFTFPSRSIS Trigger: TGATATTGATCGAGATGGGAAGGTGAACTTCTCAGACTTTATCAAGGTTCTAACAGATAAGAATCTCTTCCTCAAGGCAGTGGTTCCAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENST00000305286.8 ENST00000450662.7 ENST00000518576.1 ENST00000520404.5 ENST00000636041.1 |
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| CDS CCA 72 bp | TTCACATCAACCATTTCATTTTCATCAACTGGCAGATaGTTCAGTAGGTCCTCATATTCCTCTTTCCCAACT | + |
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Preference number: 6 (lower is better) Translates to: FTSTISFSSTGR*FSRSSYSSFPT Trigger: AGTTGGGAAAGAGGAATATGAGGACCTACTGAACCATCTGCCAGTTGATGAAAATGAAATGGTTGATGTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000635817.2 |
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| CDS CAA 72 bp | GTTATTACTGACCTTCTGAAGCCTACTTCTGTCAATTaGTCAAAGTCATTCTCCGTCCAGCTTTGTTCAGTT | + |
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Preference number: 6 (lower is better) Translates to: VITDLLKPTSVN*SKSFSVQLCSV Trigger: AACTGAACAAAGCTGGACGGAGAATGACTTTGACAAATTGACAGAAGTAGGCTTCAGAAGGTCAGTAATAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000635817.2 |
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