RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EFCAB2 (Homo sapiens)

Ensembl gene IDs: ENSG00000203666

Ensembl transcript IDs: ENST00000366521.7, ENST00000366522.6, ENST00000366523.5, ENST00000391837.7, ENST00000425550.5, ENST00000427529.1, ENST00000447569.6, ENST00000473686.5, ENST00000479260.1, ENST00000479923.1, ENST00000487845.5, ENST00000495271.5, ENST00000497591.5, ENST00000518607.1, ENST00000549220.5, ENST00000551317.5

Found 366 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CGAAGTGGTGTGATCCTGAGTGGGGTCTGTGAAGCACAGCAGGCTTaGCCAGCCACGGTAACCACGATGGGTCCATCGCTGGATGGGACC +
Preference number: 1 (lower is better)
Translates to: RSGVILSGVCEAQQA*PATVTTMGPSLDGT
Trigger: GGTCCCATCCAGCGATGGACCCATCGTGGTTACCGTGGCTGGCCAAGCCTGCTGTGCTTCACAGACCCCACTCAGGATCACACCACTTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR CCA 90 bp TTTGTGCAGGTGCTTGCAGCCCTAAGGGGAGAGGTGCAGAATGGGTaGTCCCTTGCTAAGCAGAGGCTTTGGAAATGCCGCAGCAGGAGG +
Preference number: 1 (lower is better)
Translates to: FVQVLAALRGEVQNG*SLAKQRLWKCRSRR
Trigger: CCTCCTGCTGCGGCATTTCCAAAGCCTCTGCTTAGCAAGGGACCACCCATTCTGCACCTCTCCCCTTAGGGCTGCAAGCACCTGCACAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR TCA 90 bp GCGGGTCAGCAACCTGCAGACTGGCCAGCACGGGTGTGGTCAGGTTaGTGCTGTGTCCAAAGAGCAGTTTGTGTAGACGAGACGTCTCTT +
Preference number: 1 (lower is better)
Translates to: AGQQPADWPARVWSG*CCVQRAVCVDETSL
Trigger: AAGAGACGTCTCGTCTACACAAACTGCTCTTTGGACACAGCATCAACCTGACCACACCCGTGCTGGCCAGTCTGCAGGTTGCTGACCCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR GCA 90 bp GAGGTGCAGAATGGGTGGTCCCTTGCTAAGCAGAGGCTTTGGAAATaGCGCAGCAGGAGGTGGGAGAGTGGAATTGCTCTAGGAGGTGAG +
Preference number: 1 (lower is better)
Translates to: EVQNGWSLAKQRLWK*RSRRWESGIALGGE
Trigger: CTCACCTCCTAGAGCAATTCCACTCTCCCACCTCCTGCTGCGGCATTTCCAAAGCCTCTGCTTAGCAAGGGACCACCCATTCTGCACCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR CCA 90 bp AGGGGAGAGGTGCAGAATGGGTGGTCCCTTGCTAAGCAGAGGCTTTaGAAATGCCGCAGCAGGAGGTGGGAGAGTGGAATTGCTCTAGGA +
Preference number: 1 (lower is better)
Translates to: RGEVQNGWSLAKQRL*KCRSRRWESGIALG
Trigger: TCCTAGAGCAATTCCACTCTCCCACCTCCTGCTGCGGCATTTCCAAAGCCTCTGCTTAGCAAGGGACCACCCATTCTGCACCTCTCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR TCA 90 bp GAAATGCCGCAGCAGGAGGTGGGAGAGTGGAATTGCTCTAGGAGGTaGGACAAGGAGCTGACATTGAGCCAGAGAGGGAGAGCCAAAACC +
Preference number: 1 (lower is better)
Translates to: EMPQQEVGEWNCSRR*DKELTLSQRGRAKT
Trigger: GGTTTTGGCTCTCCCTCTCTGGCTCAATGTCAGCTCCTTGTCTCACCTCCTAGAGCAATTCCACTCTCCCACCTCCTGCTGCGGCATTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR GCA 90 bp TGCCCTGAAGAGGCAAATCCACAGACACACAGGAAGATTAGCGGTTaGCCGAGGATGACGGTGGGGGAAGGGGAACTGCTATTGGACATG +
Preference number: 1 (lower is better)
Translates to: CPEEANPQTHRKISG*PRMTVGEGELLLDM
Trigger: CATGTCCAATAGCAGTTCCCCTTCCCCCACCGTCATCCTCGGGCAACCGCTAATCTTCCTGTGTGTCTGTGGATTTGCCTCTTCAGGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR TCA 90 bp AACAGTCCTACTATCTGTGGAAGCCCTAGGGTCCTGAGGAACTTGTaGGGACAATCTGGCTTCCTGGGAAAACCCTCAGCCCCAGCCACT +
Preference number: 1 (lower is better)
Translates to: NSPTICGSPRVLRNL*GQSGFLGKPSAPAT
Trigger: AGTGGCTGGGGCTGAGGGTTTTCCCAGGAAGCCAGATTGTCCTCACAAGTTCCTCAGGACCCTAGGGCTTCCACAGATAGTAGGACTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR CCA 90 bp GCTGGGGTTTTTAAGGGTTTGGGAGTGGAGACTGGAGTGTGGAGATaGTTGATTGGTCGAAGTGTGCAGGGTGGAGTCATGGGAGAGGGA +
Preference number: 1 (lower is better)
Translates to: AGVFKGLGVETGVWR*LIGRSVQGGVMGEG
Trigger: TCCCTCTCCCATGACTCCACCCTGCACACTTCGACCAATCAACCATCTCCACACTCCAGTCTCCACTCCCAAACCCTTAAAAACCCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR TCA 90 bp CAGGGTGGAGTCATGGGAGAGGGAGACGAAGCTGTATTTTCATGCTaGTCACATTCCTCTGTGGGGGTCTTCAAACTGGTTGGTGTCGGC +
Preference number: 1 (lower is better)
Translates to: QGGVMGEGDEAVFSC*SHSSVGVFKLVGVG
Trigger: GCCGACACCAACCAGTTTGAAGACCCCCACAGAGGAATGTGATCAGCATGAAAATACAGCTTCGTCTCCCTCTCCCATGACTCCACCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR CCA 90 bp AGAGCCAGAGTCTGGTTGGCTGAGGGCCTGTTTCTCAAATCTGCGTaGTCATGTCAGAGGCATTTGAATCAGAGTGATGAGGGGCTGAGT +
Preference number: 1 (lower is better)
Translates to: RARVWLAEGLFLKSA*SCQRHLNQSDEGLS
Trigger: ACTCAGCCCCTCATCACTCTGATTCAAATGCCTCTGACATGACCACGCAGATTTGAGAAACAGGCCCTCAGCCAACCAGACTCTGGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR TCA 90 bp TTCTTTCTGATAACAGTCCTACTATCTGTGGAAGCCCTAGGGTCCTaGGGAACTTGTGAGGACAATCTGGCTTCCTGGGAAAACCCTCAG +
Preference number: 1 (lower is better)
Translates to: FFLITVLLSVEALGS*GTCEDNLASWENPQ
Trigger: CTGAGGGTTTTCCCAGGAAGCCAGATTGTCCTCACAAGTTCCTCAGGACCCTAGGGCTTCCACAGATAGTAGGACTGTTATCAGAAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR TCA 90 bp CAGTTGCTTCTGCCTTCTAAGGCAGGTGTCATGATTCATGTGATGTaGAGATCAAGTCCTTGCCTTCCCTTTGGCTTAAAAAGATTGCTG +
Preference number: 1 (lower is better)
Translates to: QLLLPSKAGVMIHVM*RSSPCLPFGLKRLL
Trigger: CAGCAATCTTTTTAAGCCAAAGGGAAGGCAAGGACTTGATCTTCACATCACATGAATCATGACACCTGCCTTAGAAGGCAGAAGCAACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR GCA 90 bp CTCGTTTCTTCACCCTTCGTTCAAGGTGTACCACATTCAACGCCATaGTTCTGGGTACTTCTAAGCAAATGTTTGGATGAATATGGAGAG +
Preference number: 1 (lower is better)
Translates to: LVSSPFVQGVPHSTP*FWVLLSKCLDEYGE
Trigger: CTCTCCATATTCATCCAAACATTTGCTTAGAAGTACCCAGAAGCATGGCGTTGAATGTGGTACACCTTGAACGAAGGGTGAAGAAACGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR GCA 90 bp CCAGACACAGAAGGCCACATATTGTATGATTGTGTTTATGTGAAATaGCCTGAAGAGGCAAATCCACAGACACACAGGAAGATTAGCGGT +
Preference number: 1 (lower is better)
Translates to: PDTEGHILYDCVYVK*PEEANPQTHRKISG
Trigger: ACCGCTAATCTTCCTGTGTGTCTGTGGATTTGCCTCTTCAGGGCATTTCACATAAACACAATCATACAATATGTGGCCTTCTGTGTCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR GCA 90 bp TACCTAGTGCTACGTCACTGTTGGTTACAAGGAAGTGGGTCAAAGTaGAGGCTGACTGATGCTTACTTACAACTATATTTCTGTCCAGAA +
Preference number: 1 (lower is better)
Translates to: YLVLRHCWLQGSGSK*RLTDAYLQLYFCPE
Trigger: TTCTGGACAGAAATATAGTTGTAAGTAAGCATCAGTCAGCCTGCACTTTGACCCACTTCCTTGTAACCAACAGTGACGTAGCACTAGGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR GCA 90 bp AAGAAGCCTTCATTACACTGCTACTCGTTTTCGAGTGGTTCGTTCTaGCCCCTCTTAAGATCTTTACATGCCAAACCTTGGGTAATTAAG +
Preference number: 1 (lower is better)
Translates to: KKPSLHCYSFSSGSF*PLLRSLHAKPWVIK
Trigger: CTTAATTACCCAAGGTTTGGCATGTAAAGATCTTAAGAGGGGGCAGAACGAACCACTCGAAAACGAGTAGCAGTGTAATGAAGGCTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366523.5
3UTR CCA 90 bp TCTTCACCCTTCGTTCAAGGTGTACCACATTCAACGCCATGCTTCTaGGTACTTCTAAGCAAATGTTTGGATGAATATGGAGAGAAGAGA +
Preference number: 1 (lower is better)
Translates to: SSPFVQGVPHSTPCF*VLLSKCLDEYGEKR
Trigger: TCTCTTCTCTCCATATTCATCCAAACATTTGCTTAGAAGTACCCAGAAGCATGGCGTTGAATGTGGTACACCTTGAACGAAGGGTGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR TCA 90 bp AGAAGCCAGACACAGAAGGCCACATATTGTATGATTGTGTTTATGTaGAATGCCCTGAAGAGGCAAATCCACAGACACACAGGAAGATTA +
Preference number: 1 (lower is better)
Translates to: RSQTQKATYCMIVFM*NALKRQIHRHTGRL
Trigger: TAATCTTCCTGTGTGTCTGTGGATTTGCCTCTTCAGGGCATTTCACATAAACACAATCATACAATATGTGGCCTTCTGTGTCTGGCTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR TCA 90 bp GCTTACTTACAACTATATTTCTGTCCAGAATTCTTCTTAATCCTGTaGGGATGGCTCACCATATCGTGCTCAATCATGGTGCCAAAATGC +
Preference number: 1 (lower is better)
Translates to: AYLQLYFCPEFFLIL*GWLTISCSIMVPKC
Trigger: GCATTTTGGCACCATGATTGAGCACGATATGGTGAGCCATCCTCACAGGATTAAGAAGAATTCTGGACAGAAATATAGTTGTAAGTAAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR TCA 90 bp AGTCCTTGCCTTCCCTTTGGCTTAAAAAGATTGCTGATGGAAAACTaGGAGAATTTGATTGAGTTGAGGCATAGGATAACCACCAAGTTT +
Preference number: 1 (lower is better)
Translates to: SPCLPFGLKRLLMEN*ENLIELRHRITTKF
Trigger: AAACTTGGTGGTTATCCTATGCCTCAACTCAATCAAATTCTCTCAGTTTTCCATCAGCAATCTTTTTAAGCCAAAGGGAAGGCAAGGACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR-3UTR TCA 90 bp TGTGCAGGTGCTTGCAGCCCTAAGGGGAGAGGTGCAGAATGGGTGGTCCCTTGCGGTGGCAGGATCGCTTaGACCCAGGAGTTTGAGACC +
Preference number: 2 (lower is better)
Translates to: CAGACSPKGRGAEWVVPCGGRIA*TQEFET
Trigger: GGTCTCAAACTCCTGGGTTCAAGCGATCCTGCCACC...GCAAGGGACCACCCATTCTGCACCTCTCCCCTTAGGGCTGCAAGCACCTGCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR-3UTR TCA 90 bp GAAGTGGCCAAAACCCACCAAACCCAAAATGGTGATGAGAGTGGCCTCTGGTCGGGCGCGAGGACCCCTTaGGTCCAGGAGGTCGATGCT +
Preference number: 2 (lower is better)
Translates to: EVAKTHQTQNGDESGLWSGARTP*VQEVDA
Trigger: AGCATCGACCTCCTGGACTCAAGGGGTCCTCGCGCC...CGACCAGAGGCCACTCTCATCACCATTTTGGGTTTGGTGGGTTTTGGCCACTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR-3UTR CCA 90 bp TGTGCAGGTGCTTGCAGCCCTAAGGGGAGAGGTGCAGAATGGGTGGTCCCTTGCCACCTGCATTCCAGCTaGGGTGACAGTGAAACCCTG +
Preference number: 2 (lower is better)
Translates to: CAGACSPKGRGAEWVVPCHLHSS*GDSETL
Trigger: CAGGGTTTCACTGTCACCCCAGCTGGAATGCAGGTG...GCAAGGGACCACCCATTCTGCACCTCTCCCCTTAGGGCTGCAAGCACCTGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR-3UTR CCA 90 bp TGTGCAGGTGCTTGCAGCCCTAAGGGGAGAGGTGCAGAATGGGTGGTCCCTTGCTGCCGCAGCAGGAGGTaGGAGAGTGGAATTGCTCTA +
Preference number: 2 (lower is better)
Translates to: CAGACSPKGRGAEWVVPCCRSRR*ESGIAL
Trigger: TAGAGCAATTCCACTCTCCCACCTCCTGCTGCGGCA...GCAAGGGACCACCCATTCTGCACCTCTCCCCTTAGGGCTGCAAGCACCTGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR-3UTR TCA 90 bp TGTGCAGGTGCTTGCAGCCCTAAGGGGAGAGGTGCAGAATGGGTGGTCCCTTGCAGGTCGATGCTACAGTaGGCTGTGATCATGCCACCT +
Preference number: 2 (lower is better)
Translates to: CAGACSPKGRGAEWVVPCRSMLQ*AVIMPP
Trigger: AGGTGGCATGATCACAGCTCACTGTAGCATCGACCT...GCAAGGGACCACCCATTCTGCACCTCTCCCCTTAGGGCTGCAAGCACCTGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR-3UTR TCA 90 bp TGTGCAGGTGCTTGCAGCCCTAAGGGGAGAGGTGCAGAATGGGTGGTCCCTTGCGCTGGAACGCACTGCTaGAAACTTGGAGGACTTCGA +
Preference number: 2 (lower is better)
Translates to: CAGACSPKGRGAEWVVPCAGTHC*KLGGLR
Trigger: TCGAAGTCCTCCAAGTTTTCAGCAGTGCGTTCCAGC...GCAAGGGACCACCCATTCTGCACCTCTCCCCTTAGGGCTGCAAGCACCTGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR-3UTR GCA 90 bp ACAGTGGAACGAAGTGGTGTGATCCTGAGTGGGGTCTGTGAAGCACAGCAGGCTAGGCGTGGTGGTGTGTaGCTGTCATCCCAGCTGCTC +
Preference number: 2 (lower is better)
Translates to: TVERSGVILSGVCEAQQARRGGV*LSSQLL
Trigger: GAGCAGCTGGGATGACAGGCACACACCACCACGCCT...AGCCTGCTGTGCTTCACAGACCCCACTCAGGATCACACCACTTCGTTCCACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR-3UTR GCA 90 bp TGTGCAGGTGCTTGCAGCCCTAAGGGGAGAGGTGCAGAATGGGTGGTCCCTTGCCGTGCTCAATCATGGTaGCAAAATGCCTGTCCTGGG +
Preference number: 2 (lower is better)
Translates to: CAGACSPKGRGAEWVVPCRAQSW*QNACPG
Trigger: CCCAGGACAGGCATTTTGGCACCATGATTGAGCACG...GCAAGGGACCACCCATTCTGCACCTCTCCCCTTAGGGCTGCAAGCACCTGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR-3UTR CCA 90 bp AGGATAACCACCAAGTTTGTGCAGGTGCTTGCAGCCCTAAGGGGAGAGGTGCAGGAAGCACAGCAGGCTTaGCCAGCCACGGTAACCACG +
Preference number: 2 (lower is better)
Translates to: RITTKFVQVLAALRGEVQEAQQA*PATVTT
Trigger: CGTGGTTACCGTGGCTGGCCAAGCCTGCTGTGCTTC...CTGCACCTCTCCCCTTAGGGCTGCAAGCACCTGCACAAACTTGGTGGTTATCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR-3UTR TCA 90 bp TGGCATCTCCAAACAGTGGAACGAAGTGGTGTGATCCTGAGTGGGGTCTGTGAATCCCCTCAGCTCTCGTaGCAGGTCTGGGGGATCCCA +
Preference number: 2 (lower is better)
Translates to: WHLQTVERSGVILSGVCESPQLS*QVWGIP
Trigger: TGGGATCCCCCAGACCTGTCACGAGAGCTGAGGGGA...TTCACAGACCCCACTCAGGATCACACCACTTCGTTCCACTGTTTGGAGATGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR-3UTR TCA 90 bp AGGATAACCACCAAGTTTGTGCAGGTGCTTGCAGCCCTAAGGGGAGAGGTGCAGCGGGTGTGGTCAGGTTaGTGCTGTGTCCAAAGAGCA +
Preference number: 2 (lower is better)
Translates to: RITTKFVQVLAALRGEVQRVWSG*CCVQRA
Trigger: TGCTCTTTGGACACAGCATCAACCTGACCACACCCG...CTGCACCTCTCCCCTTAGGGCTGCAAGCACCTGCACAAACTTGGTGGTTATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR-3UTR TCA 90 bp TGTGCAGGTGCTTGCAGCCCTAAGGGGAGAGGTGCAGAATGGGTGGTCCCTTGCGGTCAAAGTGCAGGCTaGCTGATGCTTACTTACAAC +
Preference number: 2 (lower is better)
Translates to: CAGACSPKGRGAEWVVPCGQSAG*LMLTYN
Trigger: GTTGTAAGTAAGCATCAGTCAGCCTGCACTTTGACC...GCAAGGGACCACCCATTCTGCACCTCTCCCCTTAGGGCTGCAAGCACCTGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR-3UTR GCA 90 bp TGTGCAGGTGCTTGCAGCCCTAAGGGGAGAGGTGCAGAATGGGTGGTCCCTTGCAGTGCCACTTGGAGTTaGGTTTTGACTGCTGGAACT +
Preference number: 2 (lower is better)
Translates to: CAGACSPKGRGAEWVVPCSATWS*VLTAGT
Trigger: AGTTCCAGCAGTCAAAACGCAACTCCAAGTGGCACT...GCAAGGGACCACCCATTCTGCACCTCTCCCCTTAGGGCTGCAAGCACCTGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR-3UTR GCA 90 bp ACAGTGGAACGAAGTGGTGTGATCCTGAGTGGGGTCTGTGAAGCACAGCAGGCTACAGTGAGTGCCACCTaGACCCACCTCAGGAGAAGT +
Preference number: 2 (lower is better)
Translates to: TVERSGVILSGVCEAQQATVSAT*THLRRS
Trigger: ACTTCTCCTGAGGTGGGTGCAGGTGGCACTCACTGT...AGCCTGCTGTGCTTCACAGACCCCACTCAGGATCACACCACTTCGTTCCACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR-3UTR GCA 90 bp TGCGTCCCCAGCCTGTTAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCACCGTTAACCACAGTGAGTaGCACCTGCACCCACCTCAG +
Preference number: 2 (lower is better)
Translates to: CVPSLLGILSHRMRQEVTVNHSE*HLHPPQ
Trigger: CTGAGGTGGGTGCAGGTGGCACTCACTGTGGTTAAC...GGTGACCTCCTGTCTCATCCTGTGACTTAGAATGCCTAACAGGCTGGGGACGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR CAA 90 bp GGGGTTTTTAAGGGTTTGGGAGTGGAGACTGGAGTGTGGAGATGGTaGATTGGTCGAAGTGTGCAGGGTGGAGTCATGGGAGAGGGAGAC +
Preference number: 2 (lower is better)
Translates to: GVFKGLGVETGVWRW*IGRSVQGGVMGEGD
Trigger: GTCTCCCTCTCCCATGACTCCACCCTGCACACTTCGACCAATCAACCATCTCCACACTCCAGTCTCCACTCCCAAACCCTTAAAAACCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR-3UTR TCA 90 bp AGGATAACCACCAAGTTTGTGCAGGTGCTTGCAGCCCTAAGGGGAGAGGTGCAGTCATCATTTCGGTGGTaGTGCTGGAACGCACTGCTG +
Preference number: 2 (lower is better)
Translates to: RITTKFVQVLAALRGEVQSSFRW*CWNALL
Trigger: CAGCAGTGCGTTCCAGCATCACCACCGAAATGATGA...CTGCACCTCTCCCCTTAGGGCTGCAAGCACCTGCACAAACTTGGTGGTTATCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR-3UTR CCA 90 bp TGTGCAGGTGCTTGCAGCCCTAAGGGGAGAGGTGCAGAATGGGTGGTCCCTTGCTATCGTGCTCAATCATaGTGCCAAAATGCCTGTCCT +
Preference number: 2 (lower is better)
Translates to: CAGACSPKGRGAEWVVPCYRAQS*CQNACP
Trigger: AGGACAGGCATTTTGGCACCATGATTGAGCACGATA...GCAAGGGACCACCCATTCTGCACCTCTCCCCTTAGGGCTGCAAGCACCTGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR-3UTR CCA 90 bp GAAGTGGCCAAAACCCACCAAACCCAAAATGGTGATGAGAGTGGCCTCTGGTCGGAGGTGCAGAATGGGTaGTCCCTTGCTAAGCAGAGG +
Preference number: 2 (lower is better)
Translates to: EVAKTHQTQNGDESGLWSEVQNG*SLAKQR
Trigger: CCTCTGCTTAGCAAGGGACCACCCATTCTGCACCTC...CGACCAGAGGCCACTCTCATCACCATTTTGGGTTTGGTGGGTTTTGGCCACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR-3UTR CCA 90 bp GAAGTGGCCAAAACCCACCAAACCCAAAATGGTGATGAGAGTGGCCTCTGGTCGGACAATCTGGCTTCCTaGGAAAACCCTCAGCCCCAG +
Preference number: 2 (lower is better)
Translates to: EVAKTHQTQNGDESGLWSDNLAS*ENPQPQ
Trigger: CTGGGGCTGAGGGTTTTCCCAGGAAGCCAGATTGTC...CGACCAGAGGCCACTCTCATCACCATTTTGGGTTTGGTGGGTTTTGGCCACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR-3UTR TCA 90 bp TGGCCAAAACCCACCAAACCCAAAATGGTGATGAGAGTGGCCTCTGGTCGACCTGAGTGTGGAGATGGTTaGTTGGTCGAAGTGTGCAGG +
Preference number: 2 (lower is better)
Translates to: WPKPTKPKMVMRVASGRPECGDG*LVEVCR
Trigger: CCTGCACACTTCGACCAATCAACCATCTCCACACTC...AGGTCGACCAGAGGCCACTCTCATCACCATTTTGGGTTTGGTGGGTTTTGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR-3UTR TCA 90 bp TGGCATCTCCAAACAGTGGAACGAAGTGGTGTGATCCTGAGTGGGGTCTGTGAATCAAATCCATCTCCCTaGGGAGTTTGGGGCTGGGGT +
Preference number: 2 (lower is better)
Translates to: WHLQTVERSGVILSGVCESNPSP*GVWGWG
Trigger: ACCCCAGCCCCAAACTCCTCAGGGAGATGGATTTGA...TTCACAGACCCCACTCAGGATCACACCACTTCGTTCCACTGTTTGGAGATGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR-3UTR TCA 90 bp TGGCCAAAACCCACCAAACCCAAAATGGTGATGAGAGTGGCCTCTGGTCGACCTGTCCTGAGGAACTTGTaGGGACAATCTGGCTTCCTG +
Preference number: 2 (lower is better)
Translates to: WPKPTKPKMVMRVASGRPVLRNL*GQSGFL
Trigger: CAGGAAGCCAGATTGTCCTCACAAGTTCCTCAGGAC...AGGTCGACCAGAGGCCACTCTCATCACCATTTTGGGTTTGGTGGGTTTTGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR-3UTR GCA 90 bp TGTGCAGGTGCTTGCAGCCCTAAGGGGAGAGGTGCAGAATGGGTGGTCCCTTGCTGCACCTCTTTTTCCTaGCTCAGTTTTTCTAGCAAG +
Preference number: 2 (lower is better)
Translates to: CAGACSPKGRGAEWVVPCCTSFS*LSFSSK
Trigger: CTTGCTAGAAAAACTGAGGCAGGAAAAAGAGGTGCA...GCAAGGGACCACCCATTCTGCACCTCTCCCCTTAGGGCTGCAAGCACCTGCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR-3UTR GCA 90 bp TGGCCAAAACCCACCAAACCCAAAATGGTGATGAGAGTGGCCTCTGGTCGACCTATCATGGTGCCAAAATaGCTGTCCTGGGGCTGGACA +
Preference number: 2 (lower is better)
Translates to: WPKPTKPKMVMRVASGRPIMVPK*LSWGWT
Trigger: TGTCCAGCCCCAGGACAGGCATTTTGGCACCATGAT...AGGTCGACCAGAGGCCACTCTCATCACCATTTTGGGTTTGGTGGGTTTTGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR-3UTR GCA 90 bp AGGATAACCACCAAGTTTGTGCAGGTGCTTGCAGCCCTAAGGGGAGAGGTGCAGGGAAGTGGGTCAAAGTaGAGGCTGACTGATGCTTAC +
Preference number: 2 (lower is better)
Translates to: RITTKFVQVLAALRGEVQGSGSK*RLTDAY
Trigger: GTAAGCATCAGTCAGCCTGCACTTTGACCCACTTCC...CTGCACCTCTCCCCTTAGGGCTGCAAGCACCTGCACAAACTTGGTGGTTATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR-3UTR CCA 90 bp TGTGCAGGTGCTTGCAGCCCTAAGGGGAGAGGTGCAGAATGGGTGGTCCCTTGCTTTTTCTTGTCCGGCTaGGAGAAGTACATCCTGAAT +
Preference number: 2 (lower is better)
Translates to: CAGACSPKGRGAEWVVPCFFLSG*EKYILN
Trigger: ATTCAGGATGTACTTCTCCCAGCCGGACAAGAAAAA...GCAAGGGACCACCCATTCTGCACCTCTCCCCTTAGGGCTGCAAGCACCTGCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR-3UTR CCA 90 bp AGGATAACCACCAAGTTTGTGCAGGTGCTTGCAGCCCTAAGGGGAGAGGTGCAGCCAAAATGCCTGTCCTaGGGCTGGACACCTAGAATT +
Preference number: 2 (lower is better)
Translates to: RITTKFVQVLAALRGEVQPKCLS*GWTPRI
Trigger: AATTCTAGGTGTCCAGCCCCAGGACAGGCATTTTGG...CTGCACCTCTCCCCTTAGGGCTGCAAGCACCTGCACAAACTTGGTGGTTATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR-3UTR CCA 90 bp TGGCATCTCCAAACAGTGGAACGAAGTGGTGTGATCCTGAGTGGGGTCTGTGAATCGAAGTGTGCAGGGTaGAGTCATGGGAGAGGGAGA +
Preference number: 2 (lower is better)
Translates to: WHLQTVERSGVILSGVCESKCAG*SHGRGR
Trigger: TCTCCCTCTCCCATGACTCCACCCTGCACACTTCGA...TTCACAGACCCCACTCAGGATCACACCACTTCGTTCCACTGTTTGGAGATGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR-3UTR TCA 90 bp TGGCATCTCCAAACAGTGGAACGAAGTGGTGTGATCCTGAGTGGGGTCTGTGAAGTGGGGAGGGGATGGTaGGTGTTGAGGTATGTGAAT +
Preference number: 2 (lower is better)
Translates to: WHLQTVERSGVILSGVCEVGRGW*VLRYVN
Trigger: ATTCACATACCTCAACACTCACCATCCCCTCCCCAC...TTCACAGACCCCACTCAGGATCACACCACTTCGTTCCACTGTTTGGAGATGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR-3UTR TCA 90 bp TGTCATGATTCATGTGATGTGAAGATCAAGTCCTTGCCTTCCCTTTGGCTTAAAGCGGTTGCCCGAGGATaGCGGTGGGGGAAGGGGAAC +
Preference number: 2 (lower is better)
Translates to: CHDSCDVKIKSLPSLWLKAVARG*RWGKGN
Trigger: GTTCCCCTTCCCCCACCGTCATCCTCGGGCAACCGC...TTTAAGCCAAAGGGAAGGCAAGGACTTGATCTTCACATCACATGAATCATGACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR-3UTR TCA 90 bp GTCGAAGTGTGCAGGGTGGAGTCATGGGAGAGGGAGACGAAGCTGTATTTTCATGGAGTCTGTGAAGCTTaGGAACGTTGCCACTGTCAG +
Preference number: 2 (lower is better)
Translates to: VEVCRVESWERETKLYFHGVCEA*ERCHCQ
Trigger: CTGACAGTGGCAACGTTCTCAAGCTTCACAGACTCC...ATGAAAATACAGCTTCGTCTCCCTCTCCCATGACTCCACCCTGCACACTTCGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR-3UTR TCA 90 bp AGGATAACCACCAAGTTTGTGCAGGTGCTTGCAGCCCTAAGGGGAGAGGTGCAGAATTGCTCTAGGAGGTaGGACAAGGAGCTGACATTG +
Preference number: 2 (lower is better)
Translates to: RITTKFVQVLAALRGEVQNCSRR*DKELTL
Trigger: CAATGTCAGCTCCTTGTCTCACCTCCTAGAGCAATT...CTGCACCTCTCCCCTTAGGGCTGCAAGCACCTGCACAAACTTGGTGGTTATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR-3UTR GCA 90 bp TGCGTCCCCAGCCTGTTAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCACCCCACATTCAACGCCATaGTTCTGGGTACTTCTAAGC +
Preference number: 2 (lower is better)
Translates to: CVPSLLGILSHRMRQEVTPHSTP*FWVLLS
Trigger: GCTTAGAAGTACCCAGAAGCATGGCGTTGAATGTGG...GGTGACCTCCTGTCTCATCCTGTGACTTAGAATGCCTAACAGGCTGGGGACGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR-3UTR GCA 90 bp TGGCATCTCCAAACAGTGGAACGAAGTGGTGTGATCCTGAGTGGGGTCTGTGAATGTGATCATGCCACCTaGATTCCAGCTGGGGTGACA +
Preference number: 2 (lower is better)
Translates to: WHLQTVERSGVILSGVCECDHAT*IPAGVT
Trigger: TGTCACCCCAGCTGGAATGCAGGTGGCATGATCACA...TTCACAGACCCCACTCAGGATCACACCACTTCGTTCCACTGTTTGGAGATGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR-3UTR GCA 90 bp GTCGAAGTGTGCAGGGTGGAGTCATGGGAGAGGGAGACGAAGCTGTATTTTCATCTGCTCTTCCCCCAGTaGCTTGCACCTCTTTTTCCT +
Preference number: 2 (lower is better)
Translates to: VEVCRVESWERETKLYFHLLFPQ*LAPLFP
Trigger: AGGAAAAAGAGGTGCAAGGCACTGGGGGAAGAGCAG...ATGAAAATACAGCTTCGTCTCCCTCTCCCATGACTCCACCCTGCACACTTCGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR-3UTR GCA 90 bp TGCGTCCCCAGCCTGTTAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCACCAAGTTAATCCAGGGCTaGCAATCCAAAGGCAAGGTG +
Preference number: 2 (lower is better)
Translates to: CVPSLLGILSHRMRQEVTKLIQG*QSKGKV
Trigger: CACCTTGCCTTTGGATTGGCAGCCCTGGATTAACTT...GGTGACCTCCTGTCTCATCCTGTGACTTAGAATGCCTAACAGGCTGGGGACGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR-3UTR CCA 90 bp GAAGTGGCCAAAACCCACCAAACCCAAAATGGTGATGAGAGTGGCCTCTGGTCGGTAATCCTAACACTTTaGGAGGCTGAGGTGGCAGGA +
Preference number: 2 (lower is better)
Translates to: EVAKTHQTQNGDESGLWSVILTL*EAEVAG
Trigger: TCCTGCCACCTCAGCCTCCCAAAGTGTTAGGATTAC...CGACCAGAGGCCACTCTCATCACCATTTTGGGTTTGGTGGGTTTTGGCCACTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR-3UTR CCA 90 bp ACAGTGGAACGAAGTGGTGTGATCCTGAGTGGGGTCTGTGAAGCACAGCAGGCTTTTGGGAGTGGAGACTaGAGTGTGGAGATGGTTGAT +
Preference number: 2 (lower is better)
Translates to: TVERSGVILSGVCEAQQAFGSGD*SVEMVD
Trigger: ATCAACCATCTCCACACTCCAGTCTCCACTCCCAAA...AGCCTGCTGTGCTTCACAGACCCCACTCAGGATCACACCACTTCGTTCCACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR-3UTR CCA 90 bp ACAGTGGAACGAAGTGGTGTGATCCTGAGTGGGGTCTGTGAAGCACAGCAGGCTCACCGAAGGAGGAAATaGGAGGAAACGTCAAATCCA +
Preference number: 2 (lower is better)
Translates to: TVERSGVILSGVCEAQQAHRRRK*EETSNP
Trigger: TGGATTTGACGTTTCCTCCCATTTCCTCCTTCGGTG...AGCCTGCTGTGCTTCACAGACCCCACTCAGGATCACACCACTTCGTTCCACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR-3UTR TCA 90 bp GAAGTGGCCAAAACCCACCAAACCCAAAATGGTGATGAGAGTGGCCTCTGGTCGCACCCCTTTCCCTCATaGATAATCCAGCCCTTGTTT +
Preference number: 2 (lower is better)
Translates to: EVAKTHQTQNGDESGLWSHPFPS*IIQPLF
Trigger: AAACAAGGGCTGGATTATTCATGAGGGAAAGGGGTG...CGACCAGAGGCCACTCTCATCACCATTTTGGGTTTGGTGGGTTTTGGCCACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR-3UTR GCA 90 bp GAAGTGGCCAAAACCCACCAAACCCAAAATGGTGATGAGAGTGGCCTCTGGTCGGCTACTAAGTCACTCTaGCTCGTTTCTTCACCCTTC +
Preference number: 2 (lower is better)
Translates to: EVAKTHQTQNGDESGLWSATKSL*LVSSPF
Trigger: GAAGGGTGAAGAAACGAGGCAGAGTGACTTAGTAGC...CGACCAGAGGCCACTCTCATCACCATTTTGGGTTTGGTGGGTTTTGGCCACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR-3UTR GCA 90 bp AGGATAACCACCAAGTTTGTGCAGGTGCTTGCAGCCCTAAGGGGAGAGGTGCAGTTTGGAATCTCCAACTaGAGCCATCTCCAAGAGATG +
Preference number: 2 (lower is better)
Translates to: RITTKFVQVLAALRGEVQFGISN*SHLQEM
Trigger: CATCTCTTGGAGATGGCTGCAGTTGGAGATTCCAAA...CTGCACCTCTCCCCTTAGGGCTGCAAGCACCTGCACAAACTTGGTGGTTATCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR-3UTR CCA 90 bp TGCGTCCCCAGCCTGTTAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCACCGCACTGCTGAAAACTTaGAGGACTTCGACTTTCAAC +
Preference number: 2 (lower is better)
Translates to: CVPSLLGILSHRMRQEVTALLKT*RTSTFN
Trigger: GTTGAAAGTCGAAGTCCTCCAAGTTTTCAGCAGTGC...GGTGACCTCCTGTCTCATCCTGTGACTTAGAATGCCTAACAGGCTGGGGACGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR-3UTR CCA 90 bp GAAGTGGCCAAAACCCACCAAACCCAAAATGGTGATGAGAGTGGCCTCTGGTCGGTGCTACGTCACTGTTaGTTACAAGGAAGTGGGTCA +
Preference number: 2 (lower is better)
Translates to: EVAKTHQTQNGDESGLWSVLRHC*LQGSGS
Trigger: TGACCCACTTCCTTGTAACCAACAGTGACGTAGCAC...CGACCAGAGGCCACTCTCATCACCATTTTGGGTTTGGTGGGTTTTGGCCACTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR-3UTR TCA 90 bp TGGCATCTCCAAACAGTGGAACGAAGTGGTGTGATCCTGAGTGGGGTCTGTGAAGGGAGAAGTACATCCTaGATACCCTTTTCCAGCCAA +
Preference number: 2 (lower is better)
Translates to: WHLQTVERSGVILSGVCEGRSTS*IPFSSQ
Trigger: TTGGCTGGAAAAGGGTATTCAGGATGTACTTCTCCC...TTCACAGACCCCACTCAGGATCACACCACTTCGTTCCACTGTTTGGAGATGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR-3UTR CCA 90 bp TGGCATCTCCAAACAGTGGAACGAAGTGGTGTGATCCTGAGTGGGGTCTGTGAAAATTGCACACTTGAATaGGGTGAATGTTGGCTGGGC +
Preference number: 2 (lower is better)
Translates to: WHLQTVERSGVILSGVCENCTLE*GECWLG
Trigger: GCCCAGCCAACATTCACCCCATTCAAGTGTGCAATT...TTCACAGACCCCACTCAGGATCACACCACTTCGTTCCACTGTTTGGAGATGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR-3UTR CCA 90 bp GAAGTGGCCAAAACCCACCAAACCCAAAATGGTGATGAGAGTGGCCTCTGGTCGGATGGTAAAGAAACCTaGCTTAAGACCAGGTGTGGT +
Preference number: 2 (lower is better)
Translates to: EVAKTHQTQNGDESGLWSDGKET*LKTRCG
Trigger: ACCACACCTGGTCTTAAGCCAGGTTTCTTTACCATC...CGACCAGAGGCCACTCTCATCACCATTTTGGGTTTGGTGGGTTTTGGCCACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR CAA 90 bp GCTGAGGGCCTGTTTCTCAAATCTGCGTGGTCATGTCAGAGGCATTaGAATCAGAGTGATGAGGGGCTGAGTAAAATGAGGCTGAGATCT +
Preference number: 2 (lower is better)
Translates to: AEGLFLKSAWSCQRH*NQSDEGLSKMRLRS
Trigger: AGATCTCAGCCTCATTTTACTCAGCCCCTCATCACTCTGATTCAAATGCCTCTGACATGACCACGCAGATTTGAGAAACAGGCCCTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR-3UTR TCA 90 bp ACAGTGGAACGAAGTGGTGTGATCCTGAGTGGGGTCTGTGAAGCACAGCAGGCTGATACTAGAATCCATTaGATTGCACACTTGAATGGG +
Preference number: 2 (lower is better)
Translates to: TVERSGVILSGVCEAQQADTRIH*IAHLNG
Trigger: CCCATTCAAGTGTGCAATTCAATGGATTCTAGTATC...AGCCTGCTGTGCTTCACAGACCCCACTCAGGATCACACCACTTCGTTCCACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR-3UTR TCA 90 bp TGGCATCTCCAAACAGTGGAACGAAGTGGTGTGATCCTGAGTGGGGTCTGTGAATTCTTCTTAATCCTGTaGGGATGGCTCACCATATCG +
Preference number: 2 (lower is better)
Translates to: WHLQTVERSGVILSGVCEFFLIL*GWLTIS
Trigger: CGATATGGTGAGCCATCCTCACAGGATTAAGAAGAA...TTCACAGACCCCACTCAGGATCACACCACTTCGTTCCACTGTTTGGAGATGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR-3UTR CCA 90 bp TGTCATGATTCATGTGATGTGAAGATCAAGTCCTTGCCTTCCCTTTGGCTTAAACAGCAACCTGCAGACTaGCCAGCACGGGTGTGGTCA +
Preference number: 2 (lower is better)
Translates to: CHDSCDVKIKSLPSLWLKQQPAD*PARVWS
Trigger: TGACCACACCCGTGCTGGCCAGTCTGCAGGTTGCTG...TTTAAGCCAAAGGGAAGGCAAGGACTTGATCTTCACATCACATGAATCATGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR-3UTR CCA 90 bp AGGATAACCACCAAGTTTGTGCAGGTGCTTGCAGCCCTAAGGGGAGAGGTGCAGAATGGGCGAATATCATaGATGCTCGTAGCAACATTT +
Preference number: 2 (lower is better)
Translates to: RITTKFVQVLAALRGEVQNGRIS*MLVATF
Trigger: AAATGTTGCTACGAGCATCCATGATATTCGCCCATT...CTGCACCTCTCCCCTTAGGGCTGCAAGCACCTGCACAAACTTGGTGGTTATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR-3UTR TCA 90 bp GAAGTGGCCAAAACCCACCAAACCCAAAATGGTGATGAGAGTGGCCTCTGGTCGAAGCCTTACACTAAATaGAAGAAGCCAGACACAGAA +
Preference number: 2 (lower is better)
Translates to: EVAKTHQTQNGDESGLWSKPYTK*KKPDTE
Trigger: TTCTGTGTCTGGCTTCTTTCATTTAGTGTAAGGCTT...CGACCAGAGGCCACTCTCATCACCATTTTGGGTTTGGTGGGTTTTGGCCACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR-3UTR TCA 90 bp TGGCCAAAACCCACCAAACCCAAAATGGTGATGAGAGTGGCCTCTGGTCGACCTATGATTCATGTGATGTaGAGATCAAGTCCTTGCCTT +
Preference number: 2 (lower is better)
Translates to: WPKPTKPKMVMRVASGRPMIHVM*RSSPCL
Trigger: AAGGCAAGGACTTGATCTTCACATCACATGAATCAT...AGGTCGACCAGAGGCCACTCTCATCACCATTTTGGGTTTGGTGGGTTTTGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR-3UTR GCA 90 bp TGGCATCTCCAAACAGTGGAACGAAGTGGTGTGATCCTGAGTGGGGTCTGTGAATGTGTTTATGTGAAATaGCCTGAAGAGGCAAATCCA +
Preference number: 2 (lower is better)
Translates to: WHLQTVERSGVILSGVCECVYVK*PEEANP
Trigger: TGGATTTGCCTCTTCAGGGCATTTCACATAAACACA...TTCACAGACCCCACTCAGGATCACACCACTTCGTTCCACTGTTTGGAGATGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR-3UTR CCA 90 bp GTCGAAGTGTGCAGGGTGGAGTCATGGGAGAGGGAGACGAAGCTGTATTTTCATTGTCGGCTGTTTTGCTaGAATTCAGGATCTGAAAAA +
Preference number: 2 (lower is better)
Translates to: VEVCRVESWERETKLYFHCRLFC*NSGSEK
Trigger: TTTTTCAGATCCTGAATTCCAGCAAAACAGCCGACA...ATGAAAATACAGCTTCGTCTCCCTCTCCCATGACTCCACCCTGCACACTTCGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR-3UTR CCA 90 bp TGTCATGATTCATGTGATGTGAAGATCAAGTCCTTGCCTTCCCTTTGGCTTAAAAACCTGGGGGAAGGCTaGGCTACAAAGAAAGGACAG +
Preference number: 2 (lower is better)
Translates to: CHDSCDVKIKSLPSLWLKNLGEG*ATKKGQ
Trigger: CTGTCCTTTCTTTGTAGCCCAGCCTTCCCCCAGGTT...TTTAAGCCAAAGGGAAGGCAAGGACTTGATCTTCACATCACATGAATCATGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR-3UTR GCA 90 bp TGTCATGATTCATGTGATGTGAAGATCAAGTCCTTGCCTTCCCTTTGGCTTAAAAAAGCTATAGGTACCTaGTCTTCCCCCAGTGCCTTG +
Preference number: 2 (lower is better)
Translates to: CHDSCDVKIKSLPSLWLKKAIGT*SSPSAL
Trigger: CAAGGCACTGGGGGAAGAGCAGGTACCTATAGCTTT...TTTAAGCCAAAGGGAAGGCAAGGACTTGATCTTCACATCACATGAATCATGACA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR-3UTR CCA 90 bp TGTCATGATTCATGTGATGTGAAGATCAAGTCCTTGCCTTCCCTTTGGCTTAAAAACAGTGGAACGAAGTaGTGTGATCCTGAGTGGGGT +
Preference number: 2 (lower is better)
Translates to: CHDSCDVKIKSLPSLWLKNSGTK*CDPEWG
Trigger: ACCCCACTCAGGATCACACCACTTCGTTCCACTGTT...TTTAAGCCAAAGGGAAGGCAAGGACTTGATCTTCACATCACATGAATCATGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR-3UTR CCA 90 bp TGTCATGATTCATGTGATGTGAAGATCAAGTCCTTGCCTTCCCTTTGGCTTAAAGGCTCTGAAAGCTTTTaGAATCTCCAACTGCAGCCA +
Preference number: 2 (lower is better)
Translates to: CHDSCDVKIKSLPSLWLKGSESF*NLQLQP
Trigger: TGGCTGCAGTTGGAGATTCCAAAAGCTTTCAGAGCC...TTTAAGCCAAAGGGAAGGCAAGGACTTGATCTTCACATCACATGAATCATGACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR-3UTR CCA 90 bp TGTCATGATTCATGTGATGTGAAGATCAAGTCCTTGCCTTCCCTTTGGCTTAAATTAAGGGTTTGGGAGTaGAGACTGGAGTGTGGAGAT +
Preference number: 2 (lower is better)
Translates to: CHDSCDVKIKSLPSLWLKLRVWE*RLECGD
Trigger: ATCTCCACACTCCAGTCTCCACTCCCAAACCCTTAA...TTTAAGCCAAAGGGAAGGCAAGGACTTGATCTTCACATCACATGAATCATGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR CAA 90 bp GGCAGGACATATGGGGAGGAAAGAGCCTTGATATCATCCCATATGTaGAAAAACAATTGCTATTCCAACTACAGTTGCTTCTGCCTTCTA +
Preference number: 2 (lower is better)
Translates to: GRTYGEERALISSHM*KNNCYSNYSCFCLL
Trigger: TAGAAGGCAGAAGCAACTGTAGTTGGAATAGCAATTGTTTTTCAACATATGGGATGATATCAAGGCTCTTTCCTCCCCATATGTCCTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR-3UTR CCA 90 bp TGTCATGATTCATGTGATGTGAAGATCAAGTCCTTGCCTTCCCTTTGGCTTAAATCAACGCCATGCTTCTaGGTACTTCTAAGCAAATGT +
Preference number: 2 (lower is better)
Translates to: CHDSCDVKIKSLPSLWLKSTPCF*VLLSKC
Trigger: ACATTTGCTTAGAAGTACCCAGAAGCATGGCGTTGA...TTTAAGCCAAAGGGAAGGCAAGGACTTGATCTTCACATCACATGAATCATGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR CCA 72 bp GTGATCCTGAGTGGGGTCTGTGAAGCACAGCAGGCTTaGCCAGCCACGGTAACCACGATGGGTCCATCGCTG +
Preference number: 3 (lower is better)
Translates to: VILSGVCEAQQA*PATVTTMGPSL
Trigger: CAGCGATGGACCCATCGTGGTTACCGTGGCTGGCCAAGCCTGCTGTGCTTCACAGACCCCACTCAGGATCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR-3UTR CAA 90 bp TGGCCAAAACCCACCAAACCCAAAATGGTGATGAGAGTGGCCTCTGGTCGACCTAGGCGCGAGGACCCCTaGAGTCCAGGAGGTCGATGC +
Preference number: 3 (lower is better)
Translates to: WPKPTKPKMVMRVASGRPRREDP*SPGGRC
Trigger: GCATCGACCTCCTGGACTCAAGGGGTCCTCGCGCCT...AGGTCGACCAGAGGCCACTCTCATCACCATTTTGGGTTTGGTGGGTTTTGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR-3UTR CAA 90 bp GAAGTGGCCAAAACCCACCAAACCCAAAATGGTGATGAGAGTGGCCTCTGGTCGAGGCGGGAGGATCACTaGAGCCCAGGAACTCGAGGC +
Preference number: 3 (lower is better)
Translates to: EVAKTHQTQNGDESGLWSRREDH*SPGTRG
Trigger: GCCTCGAGTTCCTGGGCTCAAGTGATCCTCCCGCCT...CGACCAGAGGCCACTCTCATCACCATTTTGGGTTTGGTGGGTTTTGGCCACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR-3UTR CAA 90 bp TGCGTCCCCAGCCTGTTAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCACCGACAAGGAGCTGACATaGAGCCAGAGAGGGAGAGCC +
Preference number: 3 (lower is better)
Translates to: CVPSLLGILSHRMRQEVTDKELT*SQRGRA
Trigger: GGCTCTCCCTCTCTGGCTCAATGTCAGCTCCTTGTC...GGTGACCTCCTGTCTCATCCTGTGACTTAGAATGCCTAACAGGCTGGGGACGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR TCA 72 bp CACAGACACACAGGAAGATTAGCGGTTGCCCGAGGATaGCGGTGGGGGAAGGGGAACTGCTATTGGACATGG +
Preference number: 3 (lower is better)
Translates to: HRHTGRLAVARG*RWGKGNCYWTW
Trigger: CCATGTCCAATAGCAGTTCCCCTTCCCCCACCGTCATCCTCGGGCAACCGCTAATCTTCCTGTGTGTCTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR GCA 72 bp GAGGCAAATCCACAGACACACAGGAAGATTAGCGGTTaGCCGAGGATGACGGTGGGGGAAGGGGAACTGCTA +
Preference number: 3 (lower is better)
Translates to: EANPQTHRKISG*PRMTVGEGELL
Trigger: TAGCAGTTCCCCTTCCCCCACCGTCATCCTCGGGCAACCGCTAATCTTCCTGTGTGTCTGTGGATTTGCCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR TCA 72 bp CAGCAGGAGGTGGGAGAGTGGAATTGCTCTAGGAGGTaGGACAAGGAGCTGACATTGAGCCAGAGAGGGAGA +
Preference number: 3 (lower is better)
Translates to: QQEVGEWNCSRR*DKELTLSQRGR
Trigger: TCTCCCTCTCTGGCTCAATGTCAGCTCCTTGTCTCACCTCCTAGAGCAATTCCACTCTCCCACCTCCTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR CCA 72 bp TTTGGGAGTGGAGACTGGAGTGTGGAGATGGTTGATTaGTCGAAGTGTGCAGGGTGGAGTCATGGGAGAGGG +
Preference number: 3 (lower is better)
Translates to: FGSGDWSVEMVD*SKCAGWSHGRG
Trigger: CCCTCTCCCATGACTCCACCCTGCACACTTCGACCAATCAACCATCTCCACACTCCAGTCTCCACTCCCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR-3UTR CAA 90 bp TGTGCAGGTGCTTGCAGCCCTAAGGGGAGAGGTGCAGAATGGGTGGTCCCTTGCGAAGGGGAACTGCTATaGGACATGGGGATTCTTTTT +
Preference number: 3 (lower is better)
Translates to: CAGACSPKGRGAEWVVPCEGELL*DMGILF
Trigger: AAAAAGAATCCCCATGTCCAATAGCAGTTCCCCTTC...GCAAGGGACCACCCATTCTGCACCTCTCCCCTTAGGGCTGCAAGCACCTGCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR-3UTR CAA 90 bp GAAGTGGCCAAAACCCACCAAACCCAAAATGGTGATGAGAGTGGCCTCTGGTCGACGGGTGTGGTCAGGTaGATGCTGTGTCCAAAGAGC +
Preference number: 3 (lower is better)
Translates to: EVAKTHQTQNGDESGLWSTGVVR*MLCPKS
Trigger: GCTCTTTGGACACAGCATCAACCTGACCACACCCGT...CGACCAGAGGCCACTCTCATCACCATTTTGGGTTTGGTGGGTTTTGGCCACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR-3UTR CAA 90 bp ACAGTGGAACGAAGTGGTGTGATCCTGAGTGGGGTCTGTGAAGCACAGCAGGCTGGGGTTTTTAAGGGTTaGGGAGTGGAGACTGGAGTG +
Preference number: 3 (lower is better)
Translates to: TVERSGVILSGVCEAQQAGVFKG*GVETGV
Trigger: CACTCCAGTCTCCACTCCCAAACCCTTAAAAACCCC...AGCCTGCTGTGCTTCACAGACCCCACTCAGGATCACACCACTTCGTTCCACTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR-3UTR CAA 90 bp TGCGTCCCCAGCCTGTTAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCACCAGAATGGGTGGTCCCTaGCTAAGCAGAGGCTTTGGA +
Preference number: 3 (lower is better)
Translates to: CVPSLLGILSHRMRQEVTRMGGP*LSRGFG
Trigger: TCCAAAGCCTCTGCTTAGCAAGGGACCACCCATTCT...GGTGACCTCCTGTCTCATCCTGTGACTTAGAATGCCTAACAGGCTGGGGACGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR TCA 72 bp ACTATCTGTGGAAGCCCTAGGGTCCTGAGGAACTTGTaGGGACAATCTGGCTTCCTGGGAAAACCCTCAGCC +
Preference number: 3 (lower is better)
Translates to: TICGSPRVLRNL*GQSGFLGKPSA
Trigger: GGCTGAGGGTTTTCCCAGGAAGCCAGATTGTCCTCACAAGTTCCTCAGGACCCTAGGGCTTCCACAGATAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR-3UTR CAA 90 bp GTCGAAGTGTGCAGGGTGGAGTCATGGGAGAGGGAGACGAAGCTGTATTTTCATACTGTGTGCTGTCACTaGCTACTAAGTCACTCTGCC +
Preference number: 3 (lower is better)
Translates to: VEVCRVESWERETKLYFHTVCCH*LLSHSA
Trigger: GGCAGAGTGACTTAGTAGCAAGTGACAGCACACAGT...ATGAAAATACAGCTTCGTCTCCCTCTCCCATGACTCCACCCTGCACACTTCGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR-3UTR CAA 90 bp TGGCATCTCCAAACAGTGGAACGAAGTGGTGTGATCCTGAGTGGGGTCTGTGAATCTTTGCCCTTTTTCTaGTCCGGCTGGGAGAAGTAC +
Preference number: 3 (lower is better)
Translates to: WHLQTVERSGVILSGVCESLPFF*SGWEKY
Trigger: GTACTTCTCCCAGCCGGACAAGAAAAAGGGCAAAGA...TTCACAGACCCCACTCAGGATCACACCACTTCGTTCCACTGTTTGGAGATGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR CCA 72 bp TTTAAGGGTTTGGGAGTGGAGACTGGAGTGTGGAGATaGTTGATTGGTCGAAGTGTGCAGGGTGGAGTCATG +
Preference number: 3 (lower is better)
Translates to: FKGLGVETGVWR*LIGRSVQGGVM
Trigger: CATGACTCCACCCTGCACACTTCGACCAATCAACCATCTCCACACTCCAGTCTCCACTCCCAAACCCTTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR-3UTR CAA 90 bp TGGCATCTCCAAACAGTGGAACGAAGTGGTGTGATCCTGAGTGGGGTCTGTGAATGTCCAAAGAGCAGTTaGTGTAGACGAGACGTCTCT +
Preference number: 3 (lower is better)
Translates to: WHLQTVERSGVILSGVCECPKSS*CRRDVS
Trigger: AGAGACGTCTCGTCTACACAAACTGCTCTTTGGACA...TTCACAGACCCCACTCAGGATCACACCACTTCGTTCCACTGTTTGGAGATGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR-3UTR CAA 90 bp GTCGAAGTGTGCAGGGTGGAGTCATGGGAGAGGGAGACGAAGCTGTATTTTCATCGCACTGCTGAAAACTaGGAGGACTTCGACTTTCAA +
Preference number: 3 (lower is better)
Translates to: VEVCRVESWERETKLYFHRTAEN*EDFDFQ
Trigger: TTGAAAGTCGAAGTCCTCCAAGTTTTCAGCAGTGCG...ATGAAAATACAGCTTCGTCTCCCTCTCCCATGACTCCACCCTGCACACTTCGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR-3UTR CAA 90 bp AGGATAACCACCAAGTTTGTGCAGGTGCTTGCAGCCCTAAGGGGAGAGGTGCAGCCCATGCATAGGAATTaGGTGGTAATTCCTATCATC +
Preference number: 3 (lower is better)
Translates to: RITTKFVQVLAALRGEVQPMHRN*VVIPII
Trigger: GATGATAGGAATTACCACCAAATTCCTATGCATGGG...CTGCACCTCTCCCCTTAGGGCTGCAAGCACCTGCACAAACTTGGTGGTTATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR-3UTR CAA 90 bp GTCGAAGTGTGCAGGGTGGAGTCATGGGAGAGGGAGACGAAGCTGTATTTTCATAGGCTATTTTTCCTGTaGGATGGGACAGACAACGTG +
Preference number: 3 (lower is better)
Translates to: VEVCRVESWERETKLYFHRLFFL*DGTDNV
Trigger: CACGTTGTCTGTCCCATCCAACAGGAAAAATAGCCT...ATGAAAATACAGCTTCGTCTCCCTCTCCCATGACTCCACCCTGCACACTTCGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR TCA 72 bp ATAACAGTCCTACTATCTGTGGAAGCCCTAGGGTCCTaGGGAACTTGTGAGGACAATCTGGCTTCCTGGGAA +
Preference number: 3 (lower is better)
Translates to: ITVLLSVEALGS*GTCEDNLASWE
Trigger: TTCCCAGGAAGCCAGATTGTCCTCACAAGTTCCTCAGGACCCTAGGGCTTCCACAGATAGTAGGACTGTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR CCA 72 bp GTCTGGTTGGCTGAGGGCCTGTTTCTCAAATCTGCGTaGTCATGTCAGAGGCATTTGAATCAGAGTGATGAG +
Preference number: 3 (lower is better)
Translates to: VWLAEGLFLKSA*SCQRHLNQSDE
Trigger: CTCATCACTCTGATTCAAATGCCTCTGACATGACCACGCAGATTTGAGAAACAGGCCCTCAGCCAACCAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR CCA 72 bp ACTGAGTGGTTAAAGCACAAGTTTGGATCCACATGCTaGCTGCCTCTCACGAGCTCTGAGATCTTGAGCAAG +
Preference number: 3 (lower is better)
Translates to: TEWLKHKFGSTC*LPLTSSEILSK
Trigger: CTTGCTCAAGATCTCAGAGCTCGTGAGAGGCAGCCAGCATGTGGATCCAAACTTGTGCTTTAACCACTCAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425550.5
ENST00000427529.1
3UTR GCA 72 bp ATAACTGAGTGGTTAAAGCACAAGTTTGGATCCACATaGTGGCTGCCTCTCACGAGCTCTGAGATCTTGAGC +
Preference number: 3 (lower is better)
Translates to: ITEWLKHKFGST*WLPLTSSEILS
Trigger: GCTCAAGATCTCAGAGCTCGTGAGAGGCAGCCAGCATGTGGATCCAAACTTGTGCTTTAACCACTCAGTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425550.5
ENST00000427529.1
3UTR-3UTR CAA 90 bp TGCGTCCCCAGCCTGTTAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCACCACAGAAGGCCACATATaGTATGATTGTGTTTATGTG +
Preference number: 3 (lower is better)
Translates to: CVPSLLGILSHRMRQEVTTEGHI*YDCVYV
Trigger: CACATAAACACAATCATACAATATGTGGCCTTCTGT...GGTGACCTCCTGTCTCATCCTGTGACTTAGAATGCCTAACAGGCTGGGGACGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR TCA 72 bp TATCATCATTTCGGTGGTGATGCTGGAACGCACTGCTaGAAACTTGGAGGACTTCGACTTTCAACTGAGCAG +
Preference number: 3 (lower is better)
Translates to: YHHFGGDAGTHC*KLGGLRLSTEQ
Trigger: CTGCTCAGTTGAAAGTCGAAGTCCTCCAAGTTTTCAGCAGTGCGTTCCAGCATCACCACCGAAATGATGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR GCA 72 bp TTAAACTGTGTGCTGTCACTTGCTACTAAGTCACTCTaGCTCGTTTCTTCACCCTTCGTTCAAGGTGTACCA +
Preference number: 3 (lower is better)
Translates to: LNCVLSLATKSL*LVSSPFVQGVP
Trigger: TGGTACACCTTGAACGAAGGGTGAAGAAACGAGGCAGAGTGACTTAGTAGCAAGTGACAGCACACAGTTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR GCA 72 bp TCATTACACTGCTACTCGTTTTCGAGTGGTTCGTTCTaGCCCCTCTTAAGATCTTTACATGCCAAACCTTGG +
Preference number: 3 (lower is better)
Translates to: SLHCYSFSSGSF*PLLRSLHAKPW
Trigger: CCAAGGTTTGGCATGTAAAGATCTTAAGAGGGGGCAGAACGAACCACTCGAAAACGAGTAGCAGTGTAATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366523.5
3UTR TCA 72 bp CTGCCTTCTAAGGCAGGTGTCATGATTCATGTGATGTaGAGATCAAGTCCTTGCCTTCCCTTTGGCTTAAAA +
Preference number: 3 (lower is better)
Translates to: LPSKAGVMIHVM*RSSPCLPFGLK
Trigger: TTTTAAGCCAAAGGGAAGGCAAGGACTTGATCTTCACATCACATGAATCATGACACCTGCCTTAGAAGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR GCA 72 bp TCACCCTTCGTTCAAGGTGTACCACATTCAACGCCATaGTTCTGGGTACTTCTAAGCAAATGTTTGGATGAA +
Preference number: 3 (lower is better)
Translates to: SPFVQGVPHSTP*FWVLLSKCLDE
Trigger: TTCATCCAAACATTTGCTTAGAAGTACCCAGAAGCATGGCGTTGAATGTGGTACACCTTGAACGAAGGGTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR CCA 72 bp AAAGAAGCCTTCATTACACTGCTACTCGTTTTCGAGTaGTTCGTTCTGCCCCCTCTTAAGATCTTTACATGC +
Preference number: 3 (lower is better)
Translates to: KEAFITLLLVFE*FVLPPLKIFTC
Trigger: GCATGTAAAGATCTTAAGAGGGGGCAGAACGAACCACTCGAAAACGAGTAGCAGTGTAATGAAGGCTTCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366523.5
3UTR TCA 72 bp ACTGTTGGTTACAAGGAAGTGGGTCAAAGTGCAGGCTaGCTGATGCTTACTTACAACTATATTTCTGTCCAG +
Preference number: 3 (lower is better)
Translates to: TVGYKEVGQSAG*LMLTYNYISVQ
Trigger: CTGGACAGAAATATAGTTGTAAGTAAGCATCAGTCAGCCTGCACTTTGACCCACTTCCTTGTAACCAACAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR GCA 72 bp CTACGTCACTGTTGGTTACAAGGAAGTGGGTCAAAGTaGAGGCTGACTGATGCTTACTTACAACTATATTTC +
Preference number: 3 (lower is better)
Translates to: LRHCWLQGSGSK*RLTDAYLQLYF
Trigger: GAAATATAGTTGTAAGTAAGCATCAGTCAGCCTGCACTTTGACCCACTTCCTTGTAACCAACAGTGACGTAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR TCA 72 bp CAACTATATTTCTGTCCAGAATTCTTCTTAATCCTGTaGGGATGGCTCACCATATCGTGCTCAATCATGGTG +
Preference number: 3 (lower is better)
Translates to: QLYFCPEFFLIL*GWLTISCSIMV
Trigger: CACCATGATTGAGCACGATATGGTGAGCCATCCTCACAGGATTAAGAAGAATTCTGGACAGAAATATAGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR CCA 72 bp TTCGTTCAAGGTGTACCACATTCAACGCCATGCTTCTaGGTACTTCTAAGCAAATGTTTGGATGAATATGGA +
Preference number: 3 (lower is better)
Translates to: FVQGVPHSTPCF*VLLSKCLDEYG
Trigger: TCCATATTCATCCAAACATTTGCTTAGAAGTACCCAGAAGCATGGCGTTGAATGTGGTACACCTTGAACGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR CCA 90 bp TGTGCAGGTGCTTGCAGCCCTAAGGGGAGAGGTGCAGAATGGGTGGTCCCTTGCGCGGCGAGCCTGGCCTaGAGGAGGGGCCGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: CAGACSPKGRGAEWVVPCAASLA*RRGRSE
Trigger: TTCAGAGCGGCCCCTCCTCCAGGCCAGGCTCGCCGC...GCAAGGGACCACCCATTCTGCACCTCTCCCCTTAGGGCTGCAAGCACCTGCACA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR GCA 90 bp AGGATAACCACCAAGTTTGTGCAGGTGCTTGCAGCCCTAAGGGGAGAGGTGCAGACCAGAGGCCCCGTCTaGCACCCGGCCCCCGGCCTT +
Preference number: 4 (lower is better)
Translates to: RITTKFVQVLAALRGEVQTRGPV*HPAPGL
Trigger: AAGGCCGGGGGCCGGGTGGCAGACGGGGCCTCTGGT...CTGCACCTCTCCCCTTAGGGCTGCAAGCACCTGCACAAACTTGGTGGTTATCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR GCA 90 bp TGTGCAGGTGCTTGCAGCCCTAAGGGGAGAGGTGCAGAATGGGTGGTCCCTTGCCCGGGAGGCGGAGCTTaGAGTGAGCCGAGATTGTGC +
Preference number: 4 (lower is better)
Translates to: CAGACSPKGRGAEWVVPCPGGGA*SEPRLC
Trigger: GCACAATCTCGGCTCACTGCAAGCTCCGCCTCCCGG...GCAAGGGACCACCCATTCTGCACCTCTCCCCTTAGGGCTGCAAGCACCTGCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR GCA 90 bp AGGATAACCACCAAGTTTGTGCAGGTGCTTGCAGCCCTAAGGGGAGAGGTGCAGCGTCCGCCATCTTGCTaGGGAGCCGGTCGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: RITTKFVQVLAALRGEVQRPPSC*GAGRLG
Trigger: TCCCAGGCGACCGGCTCCGCAGCAAGATGGCGGACG...CTGCACCTCTCCCCTTAGGGCTGCAAGCACCTGCACAAACTTGGTGGTTATCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR CCA 90 bp TGGCCAAAACCCACCAAACCCAAAATGGTGATGAGAGTGGCCTCTGGTCGACCTCCACGACCCTCGCGCTaGGGGAAGACCAGAGGCCCC +
Preference number: 4 (lower is better)
Translates to: WPKPTKPKMVMRVASGRPPRPSR*GKTRGP
Trigger: GGGGCCTCTGGTCTTCCCCCAGCGCGAGGGTCGTGG...AGGTCGACCAGAGGCCACTCTCATCACCATTTTGGGTTTGGTGGGTTTTGGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR TCA 90 bp GAAGTGGCCAAAACCCACCAAACCCAAAATGGTGATGAGAGTGGCCTCTGGTCGGAGGAGGGGCCGCTCTaGATCCCGGGGGAGGAAGAC +
Preference number: 4 (lower is better)
Translates to: EVAKTHQTQNGDESGLWSEEGPL*IPGEED
Trigger: GTCTTCCTCCCCCGGGATTCAGAGCGGCCCCTCCTC...CGACCAGAGGCCACTCTCATCACCATTTTGGGTTTGGTGGGTTTTGGCCACTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR GCA 90 bp ACAGTGGAACGAAGTGGTGTGATCCTGAGTGGGGTCTGTGAAGCACAGCAGGCTTCTCGTCCGCCATCTTaGTGCGGAGCCGGTCGCCTG +
Preference number: 4 (lower is better)
Translates to: TVERSGVILSGVCEAQQASRPPS*CGAGRL
Trigger: CAGGCGACCGGCTCCGCAGCAAGATGGCGGACGAGA...AGCCTGCTGTGCTTCACAGACCCCACTCAGGATCACACCACTTCGTTCCACTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR CCA 90 bp TGCGTCCCCAGCCTGTTAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCACCGGAGGCCGAGGCGGGTaGATCACGAGTCACGCCTGT +
Preference number: 4 (lower is better)
Translates to: CVPSLLGILSHRMRQEVTGGRGG*ITSHAC
Trigger: ACAGGCGTGACTCGTGATCCACCCGCCTCGGCCTCC...GGTGACCTCCTGTCTCATCCTGTGACTTAGAATGCCTAACAGGCTGGGGACGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR TCA 90 bp TGGCCAAAACCCACCAAACCCAAAATGGTGATGAGAGTGGCCTCTGGTCGACCTGGCGCGAGGACCCCTTaGGTCCAGGAGGTCGATGCT +
Preference number: 4 (lower is better)
Translates to: WPKPTKPKMVMRVASGRPGARTP*VQEVDA
Trigger: AGCATCGACCTCCTGGACTCAAGGGGTCCTCGCGCC...AGGTCGACCAGAGGCCACTCTCATCACCATTTTGGGTTTGGTGGGTTTTGGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR TCA 90 bp TGGCATCTCCAAACAGTGGAACGAAGTGGTGTGATCCTGAGTGGGGTCTGTGAAGCGGTTGCCCGAGGATaGCGGTGGGGGAAGGGGAAC +
Preference number: 4 (lower is better)
Translates to: WHLQTVERSGVILSGVCEAVARG*RWGKGN
Trigger: GTTCCCCTTCCCCCACCGTCATCCTCGGGCAACCGC...TTCACAGACCCCACTCAGGATCACACCACTTCGTTCCACTGTTTGGAGATGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR TCA 90 bp TGTGCAGGTGCTTGCAGCCCTAAGGGGAGAGGTGCAGAATGGGTGGTCCCTTGCTCAAATCCATCTCCCTaGGGAGTTTGGGGCTGGGGT +
Preference number: 4 (lower is better)
Translates to: CAGACSPKGRGAEWVVPCSNPSP*GVWGWG
Trigger: ACCCCAGCCCCAAACTCCTCAGGGAGATGGATTTGA...GCAAGGGACCACCCATTCTGCACCTCTCCCCTTAGGGCTGCAAGCACCTGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR TCA 90 bp TGTGCAGGTGCTTGCAGCCCTAAGGGGAGAGGTGCAGAATGGGTGGTCCCTTGCCTCCGTGGAGTTGGATaGGCCTCTGAGTCTGACAAG +
Preference number: 4 (lower is better)
Translates to: CAGACSPKGRGAEWVVPCLRGVG*ASESDK
Trigger: CTTGTCAGACTCAGAGGCTCATCCAACTCCACGGAG...GCAAGGGACCACCCATTCTGCACCTCTCCCCTTAGGGCTGCAAGCACCTGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR GCA 90 bp TGTGCAGGTGCTTGCAGCCCTAAGGGGAGAGGTGCAGAATGGGTGGTCCCTTGCGTTAACCACAGTGAGTaGCACCTGCACCCACCTCAG +
Preference number: 4 (lower is better)
Translates to: CAGACSPKGRGAEWVVPCVNHSE*HLHPPQ
Trigger: CTGAGGTGGGTGCAGGTGGCACTCACTGTGGTTAAC...GCAAGGGACCACCCATTCTGCACCTCTCCCCTTAGGGCTGCAAGCACCTGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR CCA 90 bp TGTGCAGGTGCTTGCAGCCCTAAGGGGAGAGGTGCAGAATGGGTGGTCCCTTGCGAGGTGCAGAATGGGTaGTCCCTTGCTAAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: CAGACSPKGRGAEWVVPCEVQNG*SLAKQR
Trigger: CCTCTGCTTAGCAAGGGACCACCCATTCTGCACCTC...GCAAGGGACCACCCATTCTGCACCTCTCCCCTTAGGGCTGCAAGCACCTGCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR TCA 90 bp GAAGTGGCCAAAACCCACCAAACCCAAAATGGTGATGAGAGTGGCCTCTGGTCGTCCCCTCAGCTCTCGTaGCAGGTCTGGGGGATCCCA +
Preference number: 4 (lower is better)
Translates to: EVAKTHQTQNGDESGLWSSPQLS*QVWGIP
Trigger: TGGGATCCCCCAGACCTGTCACGAGAGCTGAGGGGA...CGACCAGAGGCCACTCTCATCACCATTTTGGGTTTGGTGGGTTTTGGCCACTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR GCA 90 bp TGCGTCCCCAGCCTGTTAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCACCAGGCGTGGTGGTGTGTaGCTGTCATCCCAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: CVPSLLGILSHRMRQEVTRRGGV*LSSQLL
Trigger: GAGCAGCTGGGATGACAGGCACACACCACCACGCCT...GGTGACCTCCTGTCTCATCCTGTGACTTAGAATGCCTAACAGGCTGGGGACGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR GCA 90 bp GTCGAAGTGTGCAGGGTGGAGTCATGGGAGAGGGAGACGAAGCTGTATTTTCATGGCGGGTCAGCAACCTaGAGACTGGCCAGCACGGGT +
Preference number: 4 (lower is better)
Translates to: VEVCRVESWERETKLYFHGGSAT*RLASTG
Trigger: ACCCGTGCTGGCCAGTCTGCAGGTTGCTGACCCGCC...ATGAAAATACAGCTTCGTCTCCCTCTCCCATGACTCCACCCTGCACACTTCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR GCA 90 bp TGTGCAGGTGCTTGCAGCCCTAAGGGGAGAGGTGCAGAATGGGTGGTCCCTTGCCTGCTCTTCCCCCAGTaGCTTGCACCTCTTTTTCCT +
Preference number: 4 (lower is better)
Translates to: CAGACSPKGRGAEWVVPCLLFPQ*LAPLFP
Trigger: AGGAAAAAGAGGTGCAAGGCACTGGGGGAAGAGCAG...GCAAGGGACCACCCATTCTGCACCTCTCCCCTTAGGGCTGCAAGCACCTGCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR CCA 90 bp TGTGCAGGTGCTTGCAGCCCTAAGGGGAGAGGTGCAGAATGGGTGGTCCCTTGCCAACTTCATGTCACATaGGTGGCCACATGGAGGAGC +
Preference number: 4 (lower is better)
Translates to: CAGACSPKGRGAEWVVPCQLHVT*VATWRS
Trigger: GCTCCTCCATGTGGCCACCCATGTGACATGAAGTTG...GCAAGGGACCACCCATTCTGCACCTCTCCCCTTAGGGCTGCAAGCACCTGCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR CCA 90 bp TGTGCAGGTGCTTGCAGCCCTAAGGGGAGAGGTGCAGAATGGGTGGTCCCTTGCGTAATCCTAACACTTTaGGAGGCTGAGGTGGCAGGA +
Preference number: 4 (lower is better)
Translates to: CAGACSPKGRGAEWVVPCVILTL*EAEVAG
Trigger: TCCTGCCACCTCAGCCTCCCAAAGTGTTAGGATTAC...GCAAGGGACCACCCATTCTGCACCTCTCCCCTTAGGGCTGCAAGCACCTGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR CCA 90 bp TGTGCAGGTGCTTGCAGCCCTAAGGGGAGAGGTGCAGAATGGGTGGTCCCTTGCGTTGCAGTAGAGAAGTaGCCAAAACCCACCAAACCC +
Preference number: 4 (lower is better)
Translates to: CAGACSPKGRGAEWVVPCVAVEK*PKPTKP
Trigger: GGGTTTGGTGGGTTTTGGCCACTTCTCTACTGCAAC...GCAAGGGACCACCCATTCTGCACCTCTCCCCTTAGGGCTGCAAGCACCTGCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR TCA 90 bp TGGCCAAAACCCACCAAACCCAAAATGGTGATGAGAGTGGCCTCTGGTCGACCTGGTGGCAGGATCGCTTaGACCCAGGAGTTTGAGACC +
Preference number: 4 (lower is better)
Translates to: WPKPTKPKMVMRVASGRPGGRIA*TQEFET
Trigger: GGTCTCAAACTCCTGGGTTCAAGCGATCCTGCCACC...AGGTCGACCAGAGGCCACTCTCATCACCATTTTGGGTTTGGTGGGTTTTGGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR TCA 90 bp ACAGTGGAACGAAGTGGTGTGATCCTGAGTGGGGTCTGTGAAGCACAGCAGGCTCGGGTGTGGTCAGGTTaGTGCTGTGTCCAAAGAGCA +
Preference number: 4 (lower is better)
Translates to: TVERSGVILSGVCEAQQARVWSG*CCVQRA
Trigger: TGCTCTTTGGACACAGCATCAACCTGACCACACCCG...AGCCTGCTGTGCTTCACAGACCCCACTCAGGATCACACCACTTCGTTCCACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR GCA 90 bp TGGCATCTCCAAACAGTGGAACGAAGTGGTGTGATCCTGAGTGGGGTCTGTGAACGGTCGCCTGGGAGATaGCTAACGATAACCTCGGCC +
Preference number: 4 (lower is better)
Translates to: WHLQTVERSGVILSGVCERSPGR*LTITSA
Trigger: GGCCGAGGTTATCGTTAGGCATCTCCCAGGCGACCG...TTCACAGACCCCACTCAGGATCACACCACTTCGTTCCACTGTTTGGAGATGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR GCA 90 bp TTCATTACACTGCTACTCGTTTTCGAGTGGTTCGTTCTGCCCCCTCTTAAGATCCGTCCGCCATCTTGCTaGGGAGCCGGTCGCCTGGGA +
Preference number: 4 (lower is better)
Translates to: FITLLLVFEWFVLPPLKIRPPSC*GAGRLG
Trigger: TCCCAGGCGACCGGCTCCGCAGCAAGATGGCGGACG...GATCTTAAGAGGGGGCAGAACGAACCACTCGAAAACGAGTAGCAGTGTAATGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366523.5
CDS-3UTR GCA 90 bp TGGCATCTCCAAACAGTGGAACGAAGTGGTGTGATCCTGAGTGGGGTCTGTGAACCAAGATCACGCCACTaGACTTCAGCCTGGGCGACG +
Preference number: 4 (lower is better)
Translates to: WHLQTVERSGVILSGVCEPRSRH*TSAWAT
Trigger: CGTCGCCCAGGCTGAAGTGCAGTGGCGTGATCTTGG...TTCACAGACCCCACTCAGGATCACACCACTTCGTTCCACTGTTTGGAGATGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR GCA 90 bp TGCGTCCCCAGCCTGTTAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCACCCCCTCGGAGCTGCTCTaGCTATGGAGTAGCCATTCT +
Preference number: 4 (lower is better)
Translates to: CVPSLLGILSHRMRQEVTPSELL*LWSSHS
Trigger: AGAATGGCTACTCCATAGGCAGAGCAGCTCCGAGGG...GGTGACCTCCTGTCTCATCCTGTGACTTAGAATGCCTAACAGGCTGGGGACGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR CCA 90 bp TGGCATCTCCAAACAGTGGAACGAAGTGGTGTGATCCTGAGTGGGGTCTGTGAAGCGGAGCCGGTCGCCTaGGAGATGCCTAACGATAAC +
Preference number: 4 (lower is better)
Translates to: WHLQTVERSGVILSGVCEAEPVA*EMPNDN
Trigger: GTTATCGTTAGGCATCTCCCAGGCGACCGGCTCCGC...TTCACAGACCCCACTCAGGATCACACCACTTCGTTCCACTGTTTGGAGATGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR CCA 90 bp TGGCATCTCCAAACAGTGGAACGAAGTGGTGTGATCCTGAGTGGGGTCTGTGAACACTGCACTTCAGCCTaGGCGACGGAGCGAAACTCC +
Preference number: 4 (lower is better)
Translates to: WHLQTVERSGVILSGVCEHCTSA*ATERNS
Trigger: GGAGTTTCGCTCCGTCGCCCAGGCTGAAGTGCAGTG...TTCACAGACCCCACTCAGGATCACACCACTTCGTTCCACTGTTTGGAGATGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR CCA 90 bp TGGCATCTCCAAACAGTGGAACGAAGTGGTGTGATCCTGAGTGGGGTCTGTGAACAGCAACCTGCAGACTaGCCAGCACGGGTGTGGTCA +
Preference number: 4 (lower is better)
Translates to: WHLQTVERSGVILSGVCEQQPAD*PARVWS
Trigger: TGACCACACCCGTGCTGGCCAGTCTGCAGGTTGCTG...TTCACAGACCCCACTCAGGATCACACCACTTCGTTCCACTGTTTGGAGATGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR CCA 90 bp ACAGTGGAACGAAGTGGTGTGATCCTGAGTGGGGTCTGTGAAGCACAGCAGGCTGACAATCTGGCTTCCTaGGAAAACCCTCAGCCCCAG +
Preference number: 4 (lower is better)
Translates to: TVERSGVILSGVCEAQQADNLAS*ENPQPQ
Trigger: CTGGGGCTGAGGGTTTTCCCAGGAAGCCAGATTGTC...AGCCTGCTGTGCTTCACAGACCCCACTCAGGATCACACCACTTCGTTCCACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR TCA 90 bp TGCGTCCCCAGCCTGTTAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCACCGTGGGGAGGGGATGGTaGGTGTTGAGGTATGTGAAT +
Preference number: 4 (lower is better)
Translates to: CVPSLLGILSHRMRQEVTVGRGW*VLRYVN
Trigger: ATTCACATACCTCAACACTCACCATCCCCTCCCCAC...GGTGACCTCCTGTCTCATCCTGTGACTTAGAATGCCTAACAGGCTGGGGACGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR TCA 90 bp TGCGTCCCCAGCCTGTTAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCACCGCTGGAACGCACTGCTaGAAACTTGGAGGACTTCGA +
Preference number: 4 (lower is better)
Translates to: CVPSLLGILSHRMRQEVTAGTHC*KLGGLR
Trigger: TCGAAGTCCTCCAAGTTTTCAGCAGTGCGTTCCAGC...GGTGACCTCCTGTCTCATCCTGTGACTTAGAATGCCTAACAGGCTGGGGACGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR TCA 90 bp TGCGTCCCCAGCCTGTTAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCACCTCATCATTTCGGTGGTaGTGCTGGAACGCACTGCTG +
Preference number: 4 (lower is better)
Translates to: CVPSLLGILSHRMRQEVTSSFRW*CWNALL
Trigger: CAGCAGTGCGTTCCAGCATCACCACCGAAATGATGA...GGTGACCTCCTGTCTCATCCTGTGACTTAGAATGCCTAACAGGCTGGGGACGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR TCA 90 bp TCATTACACTGCTACTCGTTTTCGAGTGGTTCGTTCTGCCCCCTCTTAAGATCTCGCCGGAGAGCTAGGTaGAGAGCTGGGCTCCCAAGG +
Preference number: 4 (lower is better)
Translates to: SLHCYSFSSGSFCPLLRSRRRAR*RAGLPR
Trigger: CCTTGGGAGCCCAGCTCTTCACCTAGCTCTCCGGCG...AGATCTTAAGAGGGGGCAGAACGAACCACTCGAAAACGAGTAGCAGTGTAATGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366523.5
CDS-3UTR GCA 90 bp TGGCATCTCCAAACAGTGGAACGAAGTGGTGTGATCCTGAGTGGGGTCTGTGAACCGGGCCTAGCATGTTaGTTCATCACACGGTCCCCA +
Preference number: 4 (lower is better)
Translates to: WHLQTVERSGVILSGVCEPGLAC*FITRSP
Trigger: TGGGGACCGTGTGATGAAGCAACATGCTAGGCCCGG...TTCACAGACCCCACTCAGGATCACACCACTTCGTTCCACTGTTTGGAGATGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR GCA 90 bp GAAGTGGCCAAAACCCACCAAACCCAAAATGGTGATGAGAGTGGCCTCTGGTCGACAGTGAGTGCCACCTaGACCCACCTCAGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: EVAKTHQTQNGDESGLWSTVSAT*THLRRS
Trigger: ACTTCTCCTGAGGTGGGTGCAGGTGGCACTCACTGT...CGACCAGAGGCCACTCTCATCACCATTTTGGGTTTGGTGGGTTTTGGCCACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR GCA 90 bp ACAGTGGAACGAAGTGGTGTGATCCTGAGTGGGGTCTGTGAAGCACAGCAGGCTATCATGGTGCCAAAATaGCTGTCCTGGGGCTGGACA +
Preference number: 4 (lower is better)
Translates to: TVERSGVILSGVCEAQQAIMVPK*LSWGWT
Trigger: TGTCCAGCCCCAGGACAGGCATTTTGGCACCATGAT...AGCCTGCTGTGCTTCACAGACCCCACTCAGGATCACACCACTTCGTTCCACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR GCA 90 bp TGGCCAAAACCCACCAAACCCAAAATGGTGATGAGAGTGGCCTCTGGTCGACCTGTTTGTGCAGGTGCTTaGAGCCCTAAGGGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: WPKPTKPKMVMRVASGRPVCAGA*SPKGRG
Trigger: ACCTCTCCCCTTAGGGCTGCAAGCACCTGCACAAAC...AGGTCGACCAGAGGCCACTCTCATCACCATTTTGGGTTTGGTGGGTTTTGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR CCA 90 bp TGGCCAAAACCCACCAAACCCAAAATGGTGATGAGAGTGGCCTCTGGTCGACCTCACCTGCATTCCAGCTaGGGTGACAGTGAAACCCTG +
Preference number: 4 (lower is better)
Translates to: WPKPTKPKMVMRVASGRPHLHSS*GDSETL
Trigger: CAGGGTTTCACTGTCACCCCAGCTGGAATGCAGGTG...AGGTCGACCAGAGGCCACTCTCATCACCATTTTGGGTTTGGTGGGTTTTGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR CCA 90 bp TGGCCAAAACCCACCAAACCCAAAATGGTGATGAGAGTGGCCTCTGGTCGACCTTCGAAGTGTGCAGGGTaGAGTCATGGGAGAGGGAGA +
Preference number: 4 (lower is better)
Translates to: WPKPTKPKMVMRVASGRPSKCAG*SHGRGR
Trigger: TCTCCCTCTCCCATGACTCCACCCTGCACACTTCGA...AGGTCGACCAGAGGCCACTCTCATCACCATTTTGGGTTTGGTGGGTTTTGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR CCA 90 bp TGCGTCCCCAGCCTGTTAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCACCAACCTGGGGGAAGGCTaGGCTACAAAGAAAGGACAG +
Preference number: 4 (lower is better)
Translates to: CVPSLLGILSHRMRQEVTNLGEG*ATKKGQ
Trigger: CTGTCCTTTCTTTGTAGCCCAGCCTTCCCCCAGGTT...GGTGACCTCCTGTCTCATCCTGTGACTTAGAATGCCTAACAGGCTGGGGACGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR TCA 90 bp TGCGTCCCCAGCCTGTTAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCACCGCGGTGCTCATACCATaGGAAGAGCCTGATAAAGGA +
Preference number: 4 (lower is better)
Translates to: CVPSLLGILSHRMRQEVTAVLIP*EEPDKG
Trigger: TCCTTTATCAGGCTCTTCTCATGGTATGAGCACCGC...GGTGACCTCCTGTCTCATCCTGTGACTTAGAATGCCTAACAGGCTGGGGACGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR GCA 90 bp TGGCATCTCCAAACAGTGGAACGAAGTGGTGTGATCCTGAGTGGGGTCTGTGAACTCCTGTCCTGTTTGTaGGACGTGGCGTTGCTCGAT +
Preference number: 4 (lower is better)
Translates to: WHLQTVERSGVILSGVCELLSCL*DVALLD
Trigger: ATCGAGCAACGCCACGTCGCACAAACAGGACAGGAG...TTCACAGACCCCACTCAGGATCACACCACTTCGTTCCACTGTTTGGAGATGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR GCA 90 bp GAAGTGGCCAAAACCCACCAAACCCAAAATGGTGATGAGAGTGGCCTCTGGTCGTGTGATCATGCCACCTaGATTCCAGCTGGGGTGACA +
Preference number: 4 (lower is better)
Translates to: EVAKTHQTQNGDESGLWSCDHAT*IPAGVT
Trigger: TGTCACCCCAGCTGGAATGCAGGTGGCATGATCACA...CGACCAGAGGCCACTCTCATCACCATTTTGGGTTTGGTGGGTTTTGGCCACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR CCA 90 bp TGCGTCCCCAGCCTGTTAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCACCCCAAAATGCCTGTCCTaGGGCTGGACACCTAGAATT +
Preference number: 4 (lower is better)
Translates to: CVPSLLGILSHRMRQEVTPKCLS*GWTPRI
Trigger: AATTCTAGGTGTCCAGCCCCAGGACAGGCATTTTGG...GGTGACCTCCTGTCTCATCCTGTGACTTAGAATGCCTAACAGGCTGGGGACGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR CCA 90 bp TGGCATCTCCAAACAGTGGAACGAAGTGGTGTGATCCTGAGTGGGGTCTGTGAAGCTAAGCAGAGGCTTTaGAAATGCCGCAGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: WHLQTVERSGVILSGVCEAKQRL*KCRSRR
Trigger: CCTCCTGCTGCGGCATTTCCAAAGCCTCTGCTTAGC...TTCACAGACCCCACTCAGGATCACACCACTTCGTTCCACTGTTTGGAGATGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR TCA 90 bp AGGATAACCACCAAGTTTGTGCAGGTGCTTGCAGCCCTAAGGGGAGAGGTGCAGGGGAGAAGTACATCCTaGATACCCTTTTCCAGCCAA +
Preference number: 4 (lower is better)
Translates to: RITTKFVQVLAALRGEVQGRSTS*IPFSSQ
Trigger: TTGGCTGGAAAAGGGTATTCAGGATGTACTTCTCCC...CTGCACCTCTCCCCTTAGGGCTGCAAGCACCTGCACAAACTTGGTGGTTATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR TCA 90 bp GTCGAAGTGTGCAGGGTGGAGTCATGGGAGAGGGAGACGAAGCTGTATTTTCATGAGTGTGGAGATGGTTaGTTGGTCGAAGTGTGCAGG +
Preference number: 4 (lower is better)
Translates to: VEVCRVESWERETKLYFHECGDG*LVEVCR
Trigger: CCTGCACACTTCGACCAATCAACCATCTCCACACTC...ATGAAAATACAGCTTCGTCTCCCTCTCCCATGACTCCACCCTGCACACTTCGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR TCA 90 bp TGGCATCTCCAAACAGTGGAACGAAGTGGTGTGATCCTGAGTGGGGTCTGTGAAGTCCTGAGGAACTTGTaGGGACAATCTGGCTTCCTG +
Preference number: 4 (lower is better)
Translates to: WHLQTVERSGVILSGVCEVLRNL*GQSGFL
Trigger: CAGGAAGCCAGATTGTCCTCACAAGTTCCTCAGGAC...TTCACAGACCCCACTCAGGATCACACCACTTCGTTCCACTGTTTGGAGATGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR GCA 90 bp AGGATAACCACCAAGTTTGTGCAGGTGCTTGCAGCCCTAAGGGGAGAGGTGCAGTCTGCAATCAGATCATaGAGCTCTCCTTCCGTAGGA +
Preference number: 4 (lower is better)
Translates to: RITTKFVQVLAALRGEVQSAIRS*SSPSVG
Trigger: TCCTACGGAAGGAGAGCTGCATGATCTGATTGCAGA...CTGCACCTCTCCCCTTAGGGCTGCAAGCACCTGCACAAACTTGGTGGTTATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR GCA 90 bp TGCGTCCCCAGCCTGTTAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCACCAGTGCCACTTGGAGTTaGGTTTTGACTGCTGGAACT +
Preference number: 4 (lower is better)
Translates to: CVPSLLGILSHRMRQEVTSATWS*VLTAGT
Trigger: AGTTCCAGCAGTCAAAACGCAACTCCAAGTGGCACT...GGTGACCTCCTGTCTCATCCTGTGACTTAGAATGCCTAACAGGCTGGGGACGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR GCA 90 bp ACAGTGGAACGAAGTGGTGTGATCCTGAGTGGGGTCTGTGAAGCACAGCAGGCTAAGTTAATCCAGGGCTaGCAATCCAAAGGCAAGGTG +
Preference number: 4 (lower is better)
Translates to: TVERSGVILSGVCEAQQAKLIQG*QSKGKV
Trigger: CACCTTGCCTTTGGATTGGCAGCCCTGGATTAACTT...AGCCTGCTGTGCTTCACAGACCCCACTCAGGATCACACCACTTCGTTCCACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR GCA 90 bp TGGCATCTCCAAACAGTGGAACGAAGTGGTGTGATCCTGAGTGGGGTCTGTGAACGTGCTCAATCATGGTaGCAAAATGCCTGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: WHLQTVERSGVILSGVCERAQSW*QNACPG
Trigger: CCCAGGACAGGCATTTTGGCACCATGATTGAGCACG...TTCACAGACCCCACTCAGGATCACACCACTTCGTTCCACTGTTTGGAGATGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR CCA 90 bp ACAGTGGAACGAAGTGGTGTGATCCTGAGTGGGGTCTGTGAAGCACAGCAGGCTAATTGCACACTTGAATaGGGTGAATGTTGGCTGGGC +
Preference number: 4 (lower is better)
Translates to: TVERSGVILSGVCEAQQANCTLE*GECWLG
Trigger: GCCCAGCCAACATTCACCCCATTCAAGTGTGCAATT...AGCCTGCTGTGCTTCACAGACCCCACTCAGGATCACACCACTTCGTTCCACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR CCA 90 bp AGGATAACCACCAAGTTTGTGCAGGTGCTTGCAGCCCTAAGGGGAGAGGTGCAGTTTGGGAGTGGAGACTaGAGTGTGGAGATGGTTGAT +
Preference number: 4 (lower is better)
Translates to: RITTKFVQVLAALRGEVQFGSGD*SVEMVD
Trigger: ATCAACCATCTCCACACTCCAGTCTCCACTCCCAAA...CTGCACCTCTCCCCTTAGGGCTGCAAGCACCTGCACAAACTTGGTGGTTATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR CCA 90 bp TGCGTCCCCAGCCTGTTAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCACCTTAAGGGTTTGGGAGTaGAGACTGGAGTGTGGAGAT +
Preference number: 4 (lower is better)
Translates to: CVPSLLGILSHRMRQEVTLRVWE*RLECGD
Trigger: ATCTCCACACTCCAGTCTCCACTCCCAAACCCTTAA...GGTGACCTCCTGTCTCATCCTGTGACTTAGAATGCCTAACAGGCTGGGGACGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR TCA 90 bp TGCGTCCCCAGCCTGTTAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCACCTTCTTCTTAATCCTGTaGGGATGGCTCACCATATCG +
Preference number: 4 (lower is better)
Translates to: CVPSLLGILSHRMRQEVTFFLIL*GWLTIS
Trigger: CGATATGGTGAGCCATCCTCACAGGATTAAGAAGAA...GGTGACCTCCTGTCTCATCCTGTGACTTAGAATGCCTAACAGGCTGGGGACGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR TCA 90 bp TTCACCCTTCGTTCAAGGTGTACCACATTCAACGCCATGCTTCTGGGTACTTCTCTCCCACCTGCGCCATaGCAGTTTACAAATGCCAGG +
Preference number: 4 (lower is better)
Translates to: FTLRSRCTTFNAMLLGTSLPPAP*QFTNAR
Trigger: CCTGGCATTTGTAAACTGTCATGGCGCAGGTGGGAG...AGAAGTACCCAGAAGCATGGCGTTGAATGTGGTACACCTTGAACGAAGGGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR GCA 90 bp AGTGGTTCGTTCTGCCCCCTCTTAAGATCTTTACATGCCAAACCTTGGGTAATTCGGTCGCCTGGGAGATaGCTAACGATAACCTCGGCC +
Preference number: 4 (lower is better)
Translates to: SGSFCPLLRSLHAKPWVIRSPGR*LTITSA
Trigger: GGCCGAGGTTATCGTTAGGCATCTCCCAGGCGACCG...AATTACCCAAGGTTTGGCATGTAAAGATCTTAAGAGGGGGCAGAACGAACCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366523.5
CDS-3UTR GCA 90 bp TGGCCAAAACCCACCAAACCCAAAATGGTGATGAGAGTGGCCTCTGGTCGACCTCCACATTCAACGCCATaGTTCTGGGTACTTCTAAGC +
Preference number: 4 (lower is better)
Translates to: WPKPTKPKMVMRVASGRPPHSTP*FWVLLS
Trigger: GCTTAGAAGTACCCAGAAGCATGGCGTTGAATGTGG...AGGTCGACCAGAGGCCACTCTCATCACCATTTTGGGTTTGGTGGGTTTTGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR GCA 90 bp TGCGTCCCCAGCCTGTTAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCACCTTTGGAATCTCCAACTaGAGCCATCTCCAAGAGATG +
Preference number: 4 (lower is better)
Translates to: CVPSLLGILSHRMRQEVTFGISN*SHLQEM
Trigger: CATCTCTTGGAGATGGCTGCAGTTGGAGATTCCAAA...GGTGACCTCCTGTCTCATCCTGTGACTTAGAATGCCTAACAGGCTGGGGACGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR CCA 90 bp AGTGGTTCGTTCTGCCCCCTCTTAAGATCTTTACATGCCAAACCTTGGGTAATTGCGGAGCCGGTCGCCTaGGAGATGCCTAACGATAAC +
Preference number: 4 (lower is better)
Translates to: SGSFCPLLRSLHAKPWVIAEPVA*EMPNDN
Trigger: GTTATCGTTAGGCATCTCCCAGGCGACCGGCTCCGC...AATTACCCAAGGTTTGGCATGTAAAGATCTTAAGAGGGGGCAGAACGAACCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366523.5
CDS-3UTR CCA 90 bp GTCGAAGTGTGCAGGGTGGAGTCATGGGAGAGGGAGACGAAGCTGTATTTTCATGTGGAGACTGGAGTGTaGAGATGGTTGATTGGTCGA +
Preference number: 4 (lower is better)
Translates to: VEVCRVESWERETKLYFHVETGV*RWLIGR
Trigger: TCGACCAATCAACCATCTCCACACTCCAGTCTCCAC...ATGAAAATACAGCTTCGTCTCCCTCTCCCATGACTCCACCCTGCACACTTCGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR CCA 90 bp TTCACCCTTCGTTCAAGGTGTACCACATTCAACGCCATGCTTCTGGGTACTTCTTGCCGCAGCAGGAGGTaGGAGAGTGGAATTGCTCTA +
Preference number: 4 (lower is better)
Translates to: FTLRSRCTTFNAMLLGTSCRSRR*ESGIAL
Trigger: TAGAGCAATTCCACTCTCCCACCTCCTGCTGCGGCA...AGAAGTACCCAGAAGCATGGCGTTGAATGTGGTACACCTTGAACGAAGGGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR CCA 90 bp TTCACCCTTCGTTCAAGGTGTACCACATTCAACGCCATGCTTCTGGGTACTTCTCGTAGAGCCAGAGTCTaGTTGGCTGAGGGCCTGTTT +
Preference number: 4 (lower is better)
Translates to: FTLRSRCTTFNAMLLGTSRRARV*LAEGLF
Trigger: AAACAGGCCCTCAGCCAACCAGACTCTGGCTCTACG...AGAAGTACCCAGAAGCATGGCGTTGAATGTGGTACACCTTGAACGAAGGGTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR TCA 90 bp TGGCATCTCCAAACAGTGGAACGAAGTGGTGTGATCCTGAGTGGGGTCTGTGAAAACACCGTCATTGTGTaGTGGTCTCTTCTTCCACCT +
Preference number: 4 (lower is better)
Translates to: WHLQTVERSGVILSGVCENTVIV*WSLLPP
Trigger: AGGTGGAAGAAGAGACCATCACACAATGACGGTGTT...TTCACAGACCCCACTCAGGATCACACCACTTCGTTCCACTGTTTGGAGATGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR TCA 90 bp TTCACCCTTCGTTCAAGGTGTACCACATTCAACGCCATGCTTCTGGGTACTTCTGGAGTCTGTGAAGCTTaGGAACGTTGCCACTGTCAG +
Preference number: 4 (lower is better)
Translates to: FTLRSRCTTFNAMLLGTSGVCEA*ERCHCQ
Trigger: CTGACAGTGGCAACGTTCTCAAGCTTCACAGACTCC...AGAAGTACCCAGAAGCATGGCGTTGAATGTGGTACACCTTGAACGAAGGGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR TCA 90 bp GTCGAAGTGTGCAGGGTGGAGTCATGGGAGAGGGAGACGAAGCTGTATTTTCATGGTCAAAGTGCAGGCTaGCTGATGCTTACTTACAAC +
Preference number: 4 (lower is better)
Translates to: VEVCRVESWERETKLYFHGQSAG*LMLTYN
Trigger: GTTGTAAGTAAGCATCAGTCAGCCTGCACTTTGACC...ATGAAAATACAGCTTCGTCTCCCTCTCCCATGACTCCACCCTGCACACTTCGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR TCA 90 bp TTCACCCTTCGTTCAAGGTGTACCACATTCAACGCCATGCTTCTGGGTACTTCTCAGAGTCTGGTTGGCTaGGGGCCTGTTTCTCAAATC +
Preference number: 4 (lower is better)
Translates to: FTLRSRCTTFNAMLLGTSQSLVG*GPVSQI
Trigger: GATTTGAGAAACAGGCCCTCAGCCAACCAGACTCTG...AGAAGTACCCAGAAGCATGGCGTTGAATGTGGTACACCTTGAACGAAGGGTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR TCA 90 bp ATAACTGAGTGGTTAAAGCACAAGTTTGGATCCACATGCTGGCTGCCTCTCACGGCCTCTCACGAGCTCTaGGATCTTGAGCAAGTCACT +
Preference number: 4 (lower is better)
Translates to: ITEWLKHKFGSTCWLPLTASHEL*DLEQVT
Trigger: AGTGACTTGCTCAAGATCTCAGAGCTCGTGAGAGGC...CGTGAGAGGCAGCCAGCATGTGGATCCAAACTTGTGCTTTAACCACTCAGTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425550.5
ENST00000427529.1
CDS-3UTR GCA 90 bp TTCATTACACTGCTACTCGTTTTCGAGTGGTTCGTTCTGCCCCCTCTTAAGATCCTCCTGTCCTGTTTGTaGGACGTGGCGTTGCTCGAT +
Preference number: 4 (lower is better)
Translates to: FITLLLVFEWFVLPPLKILLSCL*DVALLD
Trigger: ATCGAGCAACGCCACGTCGCACAAACAGGACAGGAG...GATCTTAAGAGGGGGCAGAACGAACCACTCGAAAACGAGTAGCAGTGTAATGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366523.5
CDS-3UTR GCA 90 bp TGCGTCCCCAGCCTGTTAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCACCTGCACCTCTTTTTCCTaGCTCAGTTTTTCTAGCAAG +
Preference number: 4 (lower is better)
Translates to: CVPSLLGILSHRMRQEVTCTSFS*LSFSSK
Trigger: CTTGCTAGAAAAACTGAGGCAGGAAAAAGAGGTGCA...GGTGACCTCCTGTCTCATCCTGTGACTTAGAATGCCTAACAGGCTGGGGACGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR GCA 90 bp GAAGTGGCCAAAACCCACCAAACCCAAAATGGTGATGAGAGTGGCCTCTGGTCGTGGCTCACCATATCGTaGTCAATCATGGTGCCAAAA +
Preference number: 4 (lower is better)
Translates to: EVAKTHQTQNGDESGLWSWLTIS*SIMVPK
Trigger: TTTTGGCACCATGATTGAGCACGATATGGTGAGCCA...CGACCAGAGGCCACTCTCATCACCATTTTGGGTTTGGTGGGTTTTGGCCACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR GCA 90 bp TGGCCAAAACCCACCAAACCCAAAATGGTGATGAGAGTGGCCTCTGGTCGACCTAACTACAGTTGCTTCTaGCTTCTAAGGCAGGTGTCA +
Preference number: 4 (lower is better)
Translates to: WPKPTKPKMVMRVASGRPNYSCF*LLRQVS
Trigger: TGACACCTGCCTTAGAAGGCAGAAGCAACTGTAGTT...AGGTCGACCAGAGGCCACTCTCATCACCATTTTGGGTTTGGTGGGTTTTGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR GCA 90 bp GTCGAAGTGTGCAGGGTGGAGTCATGGGAGAGGGAGACGAAGCTGTATTTTCATCCTGTTTCTCAAATCTaGGTGGTCATGTCAGAGGCA +
Preference number: 4 (lower is better)
Translates to: VEVCRVESWERETKLYFHPVSQI*VVMSEA
Trigger: TGCCTCTGACATGACCACGCAGATTTGAGAAACAGG...ATGAAAATACAGCTTCGTCTCCCTCTCCCATGACTCCACCCTGCACACTTCGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR GCA 90 bp ATAACTGAGTGGTTAAAGCACAAGTTTGGATCCACATGCTGGCTGCCTCTCACGAAGTTTGGATCCACATaGTGGCTGCCTCTCACGAGC +
Preference number: 4 (lower is better)
Translates to: ITEWLKHKFGSTCWLPLTKFGST*WLPLTS
Trigger: GCTCGTGAGAGGCAGCCAGCATGTGGATCCAAACTT...CGTGAGAGGCAGCCAGCATGTGGATCCAAACTTGTGCTTTAACCACTCAGTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425550.5
ENST00000427529.1
CDS-3UTR CCA 90 bp TTCACCCTTCGTTCAAGGTGTACCACATTCAACGCCATGCTTCTGGGTACTTCTTATTTCTCATCCATTTaGGGACAGCACGCGCGCGCA +
Preference number: 4 (lower is better)
Translates to: FTLRSRCTTFNAMLLGTSYFSSI*GQHARA
Trigger: TGCGCGCGCGTGCTGTCCCCAAATGGATGAGAAATA...AGAAGTACCCAGAAGCATGGCGTTGAATGTGGTACACCTTGAACGAAGGGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR CCA 90 bp TGCGTCCCCAGCCTGTTAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCACCTCAACGCCATGCTTCTaGGTACTTCTAAGCAAATGT +
Preference number: 4 (lower is better)
Translates to: CVPSLLGILSHRMRQEVTSTPCF*VLLSKC
Trigger: ACATTTGCTTAGAAGTACCCAGAAGCATGGCGTTGA...GGTGACCTCCTGTCTCATCCTGTGACTTAGAATGCCTAACAGGCTGGGGACGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR CCA 90 bp TGCGTCCCCAGCCTGTTAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCACCTTTTTCTTGTCCGGCTaGGAGAAGTACATCCTGAAT +
Preference number: 4 (lower is better)
Translates to: CVPSLLGILSHRMRQEVTFFLSG*EKYILN
Trigger: ATTCAGGATGTACTTCTCCCAGCCGGACAAGAAAAA...GGTGACCTCCTGTCTCATCCTGTGACTTAGAATGCCTAACAGGCTGGGGACGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR CCA 90 bp TGGCATCTCCAAACAGTGGAACGAAGTGGTGTGATCCTGAGTGGGGTCTGTGAAGGCTCTGAAAGCTTTTaGAATCTCCAACTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: WHLQTVERSGVILSGVCEGSESF*NLQLQP
Trigger: TGGCTGCAGTTGGAGATTCCAAAAGCTTTCAGAGCC...TTCACAGACCCCACTCAGGATCACACCACTTCGTTCCACTGTTTGGAGATGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR CCA 90 bp GAAGTGGCCAAAACCCACCAAACCCAAAATGGTGATGAGAGTGGCCTCTGGTCGTATCGTGCTCAATCATaGTGCCAAAATGCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: EVAKTHQTQNGDESGLWSYRAQS*CQNACP
Trigger: AGGACAGGCATTTTGGCACCATGATTGAGCACGATA...CGACCAGAGGCCACTCTCATCACCATTTTGGGTTTGGTGGGTTTTGGCCACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR CCA 90 bp GTCGAAGTGTGCAGGGTGGAGTCATGGGAGAGGGAGACGAAGCTGTATTTTCATCACCGAAGGAGGAAATaGGAGGAAACGTCAAATCCA +
Preference number: 4 (lower is better)
Translates to: VEVCRVESWERETKLYFHHRRRK*EETSNP
Trigger: TGGATTTGACGTTTCCTCCCATTTCCTCCTTCGGTG...ATGAAAATACAGCTTCGTCTCCCTCTCCCATGACTCCACCCTGCACACTTCGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR TCA 90 bp AGGATAACCACCAAGTTTGTGCAGGTGCTTGCAGCCCTAAGGGGAGAGGTGCAGAAGCCTTACACTAAATaGAAGAAGCCAGACACAGAA +
Preference number: 4 (lower is better)
Translates to: RITTKFVQVLAALRGEVQKPYTK*KKPDTE
Trigger: TTCTGTGTCTGGCTTCTTTCATTTAGTGTAAGGCTT...CTGCACCTCTCCCCTTAGGGCTGCAAGCACCTGCACAAACTTGGTGGTTATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR TCA 90 bp ACAGTGGAACGAAGTGGTGTGATCCTGAGTGGGGTCTGTGAAGCACAGCAGGCTATGATTCATGTGATGTaGAGATCAAGTCCTTGCCTT +
Preference number: 4 (lower is better)
Translates to: TVERSGVILSGVCEAQQAMIHVM*RSSPCL
Trigger: AAGGCAAGGACTTGATCTTCACATCACATGAATCAT...AGCCTGCTGTGCTTCACAGACCCCACTCAGGATCACACCACTTCGTTCCACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR TCA 90 bp TGCGTCCCCAGCCTGTTAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCACCATCCTGGCTAACATGTaGAACCTCATCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: CVPSLLGILSHRMRQEVTILANM*NLISTK
Trigger: TTTAGTAGAGATGAGGTTTCACATGTTAGCCAGGAT...GGTGACCTCCTGTCTCATCCTGTGACTTAGAATGCCTAACAGGCTGGGGACGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR GCA 90 bp GTCGAAGTGTGCAGGGTGGAGTCATGGGAGAGGGAGACGAAGCTGTATTTTCATTTCTTCCTCTACCTCTaGAATCAGATCATGCAGCTC +
Preference number: 4 (lower is better)
Translates to: VEVCRVESWERETKLYFHFFLYL*NQIMQL
Trigger: GAGCTGCATGATCTGATTGCAGAGGTAGAGGAAGAA...ATGAAAATACAGCTTCGTCTCCCTCTCCCATGACTCCACCCTGCACACTTCGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR GCA 90 bp TGGCCAAAACCCACCAAACCCAAAATGGTGATGAGAGTGGCCTCTGGTCGACCTTATTCCAACTACAGTTaGTTCTGCCTTCTAAGGCAG +
Preference number: 4 (lower is better)
Translates to: WPKPTKPKMVMRVASGRPYSNYS*FCLLRQ
Trigger: CTGCCTTAGAAGGCAGAAGCAACTGTAGTTGGAATA...AGGTCGACCAGAGGCCACTCTCATCACCATTTTGGGTTTGGTGGGTTTTGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR GCA 90 bp TGCGTCCCCAGCCTGTTAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCACCTCTAATCTGAAGTTTTaGACCCCTGGTATTTGTGAC +
Preference number: 4 (lower is better)
Translates to: CVPSLLGILSHRMRQEVTSNLKF*TPGICD
Trigger: GTCACAAATACCAGGGGTGCAAAACTTCAGATTAGA...GGTGACCTCCTGTCTCATCCTGTGACTTAGAATGCCTAACAGGCTGGGGACGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR CCA 90 bp TTCACCCTTCGTTCAAGGTGTACCACATTCAACGCCATGCTTCTGGGTACTTCTCTAGCAAGTGTAGTATaGCCTGTGTCCCTTAACGGC +
Preference number: 4 (lower is better)
Translates to: FTLRSRCTTFNAMLLGTSLASVV*PVSLNG
Trigger: GCCGTTAAGGGACACAGGCCATACTACACTTGCTAG...AGAAGTACCCAGAAGCATGGCGTTGAATGTGGTACACCTTGAACGAAGGGTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR CCA 90 bp TGGCATCTCCAAACAGTGGAACGAAGTGGTGTGATCCTGAGTGGGGTCTGTGAAGCACTGCTGAAAACTTaGAGGACTTCGACTTTCAAC +
Preference number: 4 (lower is better)
Translates to: WHLQTVERSGVILSGVCEALLKT*RTSTFN
Trigger: GTTGAAAGTCGAAGTCCTCCAAGTTTTCAGCAGTGC...TTCACAGACCCCACTCAGGATCACACCACTTCGTTCCACTGTTTGGAGATGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR CCA 90 bp GTCGAAGTGTGCAGGGTGGAGTCATGGGAGAGGGAGACGAAGCTGTATTTTCATGATGGTAAAGAAACCTaGCTTAAGACCAGGTGTGGT +
Preference number: 4 (lower is better)
Translates to: VEVCRVESWERETKLYFHDGKET*LKTRCG
Trigger: ACCACACCTGGTCTTAAGCCAGGTTTCTTTACCATC...ATGAAAATACAGCTTCGTCTCCCTCTCCCATGACTCCACCCTGCACACTTCGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR TCA 90 bp TGGCCAAAACCCACCAAACCCAAAATGGTGATGAGAGTGGCCTCTGGTCGACCTGATACTAGAATCCATTaGATTGCACACTTGAATGGG +
Preference number: 4 (lower is better)
Translates to: WPKPTKPKMVMRVASGRPDTRIH*IAHLNG
Trigger: CCCATTCAAGTGTGCAATTCAATGGATTCTAGTATC...AGGTCGACCAGAGGCCACTCTCATCACCATTTTGGGTTTGGTGGGTTTTGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR TCA 90 bp TTCACCCTTCGTTCAAGGTGTACCACATTCAACGCCATGCTTCTGGGTACTTCTAATTGCTCTAGGAGGTaGGACAAGGAGCTGACATTG +
Preference number: 4 (lower is better)
Translates to: FTLRSRCTTFNAMLLGTSNCSRR*DKELTL
Trigger: CAATGTCAGCTCCTTGTCTCACCTCCTAGAGCAATT...AGAAGTACCCAGAAGCATGGCGTTGAATGTGGTACACCTTGAACGAAGGGTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR GCA 90 bp ATAACTGAGTGGTTAAAGCACAAGTTTGGATCCACATGCTGGCTGCCTCTCACGTCTGCAATCAGATCATaGAGCTCTCCTTCCGTAGGA +
Preference number: 4 (lower is better)
Translates to: ITEWLKHKFGSTCWLPLTSAIRS*SSPSVG
Trigger: TCCTACGGAAGGAGAGCTGCATGATCTGATTGCAGA...CGTGAGAGGCAGCCAGCATGTGGATCCAAACTTGTGCTTTAACCACTCAGTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425550.5
CDS-3UTR CCA 90 bp ACAGTGGAACGAAGTGGTGTGATCCTGAGTGGGGTCTGTGAAGCACAGCAGGCTGTATTATTCGACTCATaGTCAAAGACTTCAAATGCC +
Preference number: 4 (lower is better)
Translates to: TVERSGVILSGVCEAQQAVLFDS*SKTSNA
Trigger: GGCATTTGAAGTCTTTGACCATGAGTCGAATAATAC...AGCCTGCTGTGCTTCACAGACCCCACTCAGGATCACACCACTTCGTTCCACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR CCA 90 bp TTCACCCTTCGTTCAAGGTGTACCACATTCAACGCCATGCTTCTGGGTACTTCTCCTGTTTGTGCGACGTaGCGTTGCTCGATTTTTGTT +
Preference number: 4 (lower is better)
Translates to: FTLRSRCTTFNAMLLGTSPVCAT*RCSIFV
Trigger: AACAAAAATCGAGCAACGCCACGTCGCACAAACAGG...AGAAGTACCCAGAAGCATGGCGTTGAATGTGGTACACCTTGAACGAAGGGTGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR CCA 90 bp TTCACCCTTCGTTCAAGGTGTACCACATTCAACGCCATGCTTCTGGGTACTTCTGTGCTACGTCACTGTTaGTTACAAGGAAGTGGGTCA +
Preference number: 4 (lower is better)
Translates to: FTLRSRCTTFNAMLLGTSVLRHC*LQGSGS
Trigger: TGACCCACTTCCTTGTAACCAACAGTGACGTAGCAC...AGAAGTACCCAGAAGCATGGCGTTGAATGTGGTACACCTTGAACGAAGGGTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR CCA 90 bp TGGCCAAAACCCACCAAACCCAAAATGGTGATGAGAGTGGCCTCTGGTCGACCTAATGGGCGAATATCATaGATGCTCGTAGCAACATTT +
Preference number: 4 (lower is better)
Translates to: WPKPTKPKMVMRVASGRPNGRIS*MLVATF
Trigger: AAATGTTGCTACGAGCATCCATGATATTCGCCCATT...AGGTCGACCAGAGGCCACTCTCATCACCATTTTGGGTTTGGTGGGTTTTGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR CCA 90 bp ATAACTGAGTGGTTAAAGCACAAGTTTGGATCCACATGCTGGCTGCCTCTCACGGTTAAAGCACAAGTTTaGATCCACATGCTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: ITEWLKHKFGSTCWLPLTVKAQV*IHMLAA
Trigger: GGCAGCCAGCATGTGGATCCAAACTTGTGCTTTAAC...CGTGAGAGGCAGCCAGCATGTGGATCCAAACTTGTGCTTTAACCACTCAGTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425550.5
ENST00000427529.1
CDS-3UTR GCA 90 bp ATAACTGAGTGGTTAAAGCACAAGTTTGGATCCACATGCTGGCTGCCTCTCACGTTCTTCCTCTACCTCTaGAATCAGATCATGCAGCTC +
Preference number: 4 (lower is better)
Translates to: ITEWLKHKFGSTCWLPLTFFLYL*NQIMQL
Trigger: GAGCTGCATGATCTGATTGCAGAGGTAGAGGAAGAA...CGTGAGAGGCAGCCAGCATGTGGATCCAAACTTGTGCTTTAACCACTCAGTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425550.5
CDS-3UTR GCA 90 bp GTCGAAGTGTGCAGGGTGGAGTCATGGGAGAGGGAGACGAAGCTGTATTTTCATTGTGTTTATGTGAAATaGCCTGAAGAGGCAAATCCA +
Preference number: 4 (lower is better)
Translates to: VEVCRVESWERETKLYFHCVYVK*PEEANP
Trigger: TGGATTTGCCTCTTCAGGGCATTTCACATAAACACA...ATGAAAATACAGCTTCGTCTCCCTCTCCCATGACTCCACCCTGCACACTTCGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR GCA 90 bp GTCGAAGTGTGCAGGGTGGAGTCATGGGAGAGGGAGACGAAGCTGTATTTTCATACTGATAAAACAGGTTaGAGTAGAGAAGTGGCCAAA +
Preference number: 4 (lower is better)
Translates to: VEVCRVESWERETKLYFHTDKTG*SREVAK
Trigger: TTTGGCCACTTCTCTACTGCAACCTGTTTTATCAGT...ATGAAAATACAGCTTCGTCTCCCTCTCCCATGACTCCACCCTGCACACTTCGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR CCA 90 bp TTCATTACACTGCTACTCGTTTTCGAGTGGTTCGTTCTGCCCCCTCTTAAGATCCCTGTTTGTGCGACGTaGCGTTGCTCGATTTTTGTT +
Preference number: 4 (lower is better)
Translates to: FITLLLVFEWFVLPPLKIPVCAT*RCSIFV
Trigger: AACAAAAATCGAGCAACGCCACGTCGCACAAACAGG...GATCTTAAGAGGGGGCAGAACGAACCACTCGAAAACGAGTAGCAGTGTAATGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000366523.5
CDS-3UTR CCA 90 bp TGTCATGATTCATGTGATGTGAAGATCAAGTCCTTGCCTTCCCTTTGGCTTAAAGAGCCAGAGTCTGGTTaGCTGAGGGCCTGTTTCTCA +
Preference number: 4 (lower is better)
Translates to: CHDSCDVKIKSLPSLWLKEPESG*LRACFS
Trigger: TGAGAAACAGGCCCTCAGCCAACCAGACTCTGGCTC...TTTAAGCCAAAGGGAAGGCAAGGACTTGATCTTCACATCACATGAATCATGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR CCA 90 bp AGTGGTTCGTTCTGCCCCCTCTTAAGATCTTTACATGCCAAACCTTGGGTAATTCTACTCGTTTTCGAGTaGTTCGTTCTGCCCCCTCTT +
Preference number: 4 (lower is better)
Translates to: SGSFCPLLRSLHAKPWVILLVFE*FVLPPL
Trigger: AAGAGGGGGCAGAACGAACCACTCGAAAACGAGTAG...AATTACCCAAGGTTTGGCATGTAAAGATCTTAAGAGGGGGCAGAACGAACCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000366523.5
CDS-3UTR TCA 90 bp TGTCATGATTCATGTGATGTGAAGATCAAGTCCTTGCCTTCCCTTTGGCTTAAAAGGTCGATGCTACAGTaGGCTGTGATCATGCCACCT +
Preference number: 4 (lower is better)
Translates to: CHDSCDVKIKSLPSLWLKRSMLQ*AVIMPP
Trigger: AGGTGGCATGATCACAGCTCACTGTAGCATCGACCT...TTTAAGCCAAAGGGAAGGCAAGGACTTGATCTTCACATCACATGAATCATGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR GCA 90 bp TCATTACACTGCTACTCGTTTTCGAGTGGTTCGTTCTGCCCCCTCTTAAGATCTTTCTTCCTCTACCTCTaGAATCAGATCATGCAGCTC +
Preference number: 4 (lower is better)
Translates to: SLHCYSFSSGSFCPLLRSFFLYL*NQIMQL
Trigger: GAGCTGCATGATCTGATTGCAGAGGTAGAGGAAGAA...AGATCTTAAGAGGGGGCAGAACGAACCACTCGAAAACGAGTAGCAGTGTAATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366523.5
CDS-3UTR GCA 90 bp TCGTTTTCGAGTGGTTCGTTCTGCCCCCTCTTAAGATCTTTACATGCCAAACCTTCGAGTGGTTCGTTCTaGCCCCTCTTAAGATCTTTA +
Preference number: 4 (lower is better)
Translates to: SFSSGSFCPLLRSLHAKPSSGSF*PLLRSL
Trigger: TAAAGATCTTAAGAGGGGGCAGAACGAACCACTCGA...AGGTTTGGCATGTAAAGATCTTAAGAGGGGGCAGAACGAACCACTCGAAAACGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000366523.5
3UTR CAA 72 bp CTGTTTCTCAAATCTGCGTGGTCATGTCAGAGGCATTaGAATCAGAGTGATGAGGGGCTGAGTAAAATGAGG +
Preference number: 4 (lower is better)
Translates to: LFLKSAWSCQRH*NQSDEGLSKMR
Trigger: CCTCATTTTACTCAGCCCCTCATCACTCTGATTCAAATGCCTCTGACATGACCACGCAGATTTGAGAAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR TCA 90 bp TTCACCCTTCGTTCAAGGTGTACCACATTCAACGCCATGCTTCTGGGTACTTCTATGATTGTGTTTATGTaGAATGCCCTGAAGAGGCAA +
Preference number: 4 (lower is better)
Translates to: FTLRSRCTTFNAMLLGTSMIVFM*NALKRQ
Trigger: TTGCCTCTTCAGGGCATTTCACATAAACACAATCAT...AGAAGTACCCAGAAGCATGGCGTTGAATGTGGTACACCTTGAACGAAGGGTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR TCA 90 bp ATAACTGAGTGGTTAAAGCACAAGTTTGGATCCACATGCTGGCTGCCTCTCACGTGGAAGGAAGATAACTaGGTGGTTAAAGCACAAGTT +
Preference number: 4 (lower is better)
Translates to: ITEWLKHKFGSTCWLPLTWKEDN*VVKAQV
Trigger: AACTTGTGCTTTAACCACTCAGTTATCTTCCTTCCA...CGTGAGAGGCAGCCAGCATGTGGATCCAAACTTGTGCTTTAACCACTCAGTTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425550.5
ENST00000427529.1
CDS-3UTR GCA 90 bp TCGTTCTGCCCCCTCTTAAGATCTTTACATGCCAAACCTTGGGTAATTAAGTCATCTGCAATCAGATCATaGAGCTCTCCTTCCGTAGGA +
Preference number: 4 (lower is better)
Translates to: SFCPLLRSLHAKPWVIKSSAIRS*SSPSVG
Trigger: TCCTACGGAAGGAGAGCTGCATGATCTGATTGCAGA...TGACTTAATTACCCAAGGTTTGGCATGTAAAGATCTTAAGAGGGGGCAGAACGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366523.5
CDS-3UTR GCA 90 bp TTCACCCTTCGTTCAAGGTGTACCACATTCAACGCCATGCTTCTGGGTACTTCTATGACAGTTTACAAATaGCAGGGCAATGTCAAGAAG +
Preference number: 4 (lower is better)
Translates to: FTLRSRCTTFNAMLLGTSMTVYK*QGNVKK
Trigger: CTTCTTGACATTGCCCTGGCATTTGTAAACTGTCAT...AGAAGTACCCAGAAGCATGGCGTTGAATGTGGTACACCTTGAACGAAGGGTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR CCA 90 bp TTCACCCTTCGTTCAAGGTGTACCACATTCAACGCCATGCTTCTGGGTACTTCTTGTCGGCTGTTTTGCTaGAATTCAGGATCTGAAAAA +
Preference number: 4 (lower is better)
Translates to: FTLRSRCTTFNAMLLGTSCRLFC*NSGSEK
Trigger: TTTTTCAGATCCTGAATTCCAGCAAAACAGCCGACA...AGAAGTACCCAGAAGCATGGCGTTGAATGTGGTACACCTTGAACGAAGGGTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR GCA 90 bp AACAGAAACCATCCCCAAGCCAAAATAGCAGGAACAGTAAATAACTTTCACCAGTCTGCAATCAGATCATaGAGCTCTCCTTCCGTAGGA +
Preference number: 4 (lower is better)
Translates to: NRNHPQAKIAGTVNNFHQSAIRS*SSPSVG
Trigger: TCCTACGGAAGGAGAGCTGCATGATCTGATTGCAGA...CTGGTGAAAGTTATTTACTGTTCCTGCTATTTTGGCTTGGGGATGGTTTCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551317.5
CDS-3UTR GCA 90 bp TGTCATGATTCATGTGATGTGAAGATCAAGTCCTTGCCTTCCCTTTGGCTTAAAGCTACTAAGTCACTCTaGCTCGTTTCTTCACCCTTC +
Preference number: 4 (lower is better)
Translates to: CHDSCDVKIKSLPSLWLKATKSL*LVSSPF
Trigger: GAAGGGTGAAGAAACGAGGCAGAGTGACTTAGTAGC...TTTAAGCCAAAGGGAAGGCAAGGACTTGATCTTCACATCACATGAATCATGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR GCA 90 bp AGTGGTTCGTTCTGCCCCCTCTTAAGATCTTTACATGCCAAACCTTGGGTAATTAAGCCTTCATTACACTaGTACTCGTTTTCGAGTGGT +
Preference number: 4 (lower is better)
Translates to: SGSFCPLLRSLHAKPWVIKPSLH*YSFSSG
Trigger: ACCACTCGAAAACGAGTAGCAGTGTAATGAAGGCTT...AATTACCCAAGGTTTGGCATGTAAAGATCTTAAGAGGGGGCAGAACGAACCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366523.5
CDS-3UTR CCA 90 bp ATAACTGAGTGGTTAAAGCACAAGTTTGGATCCACATGCTGGCTGCCTCTCACGGTATTATTCGACTCATaGTCAAAGACTTCAAATGCC +
Preference number: 4 (lower is better)
Translates to: ITEWLKHKFGSTCWLPLTVLFDS*SKTSNA
Trigger: GGCATTTGAAGTCTTTGACCATGAGTCGAATAATAC...CGTGAGAGGCAGCCAGCATGTGGATCCAAACTTGTGCTTTAACCACTCAGTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425550.5
CDS-3UTR CCA 90 bp ATAACTGAGTGGTTAAAGCACAAGTTTGGATCCACATGCTGGCTGCCTCTCACGAGGAAGATAACTGAGTaGTTAAAGCACAAGTTTGGA +
Preference number: 4 (lower is better)
Translates to: ITEWLKHKFGSTCWLPLTRKITE*LKHKFG
Trigger: TCCAAACTTGTGCTTTAACCACTCAGTTATCTTCCT...CGTGAGAGGCAGCCAGCATGTGGATCCAAACTTGTGCTTTAACCACTCAGTTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425550.5
ENST00000427529.1
CDS-3UTR TCA 90 bp TCGTTCTGCCCCCTCTTAAGATCTTTACATGCCAAACCTTGGGTAATTAAGTCATCTTCCATTTCCTCTTaGGAAAAAGGCTCACCTTCT +
Preference number: 4 (lower is better)
Translates to: SFCPLLRSLHAKPWVIKSSSISS*EKGSPS
Trigger: AGAAGGTGAGCCTTTTTCTCAAGAGGAAATGGAAGA...TGACTTAATTACCCAAGGTTTGGCATGTAAAGATCTTAAGAGGGGGCAGAACGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000366523.5
CDS-3UTR TCA 90 bp TGTCATGATTCATGTGATGTGAAGATCAAGTCCTTGCCTTCCCTTTGGCTTAAAACCTCCACACCTGTCTaGAGAACTTGTGGTGATAAT +
Preference number: 4 (lower is better)
Translates to: CHDSCDVKIKSLPSLWLKTSTPV*RTCGDN
Trigger: ATTATCACCACAAGTTCTTCAGACAGGTGTGGAGGT...TTTAAGCCAAAGGGAAGGCAAGGACTTGATCTTCACATCACATGAATCATGACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR GCA 90 bp AACCATCCCCAAGCCAAAATAGCAGGAACAGTAAATAACTTTCACCAGAATGACTTCTTCCTCTACCTCTaGAATCAGATCATGCAGCTC +
Preference number: 4 (lower is better)
Translates to: NHPQAKIAGTVNNFHQNDFFLYL*NQIMQL
Trigger: GAGCTGCATGATCTGATTGCAGAGGTAGAGGAAGAA...GTCATTCTGGTGAAAGTTATTTACTGTTCCTGCTATTTTGGCTTGGGGATGGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551317.5
CDS-3UTR CCA 90 bp TTCATTACACTGCTACTCGTTTTCGAGTGGTTCGTTCTGCCCCCTCTTAAGATCGTATTATTCGACTCATaGTCAAAGACTTCAAATGCC +
Preference number: 4 (lower is better)
Translates to: FITLLLVFEWFVLPPLKIVLFDS*SKTSNA
Trigger: GGCATTTGAAGTCTTTGACCATGAGTCGAATAATAC...GATCTTAAGAGGGGGCAGAACGAACCACTCGAAAACGAGTAGCAGTGTAATGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366523.5
CDS-3UTR TCA 90 bp TGTCATGATTCATGTGATGTGAAGATCAAGTCCTTGCCTTCCCTTTGGCTTAAATTGCTGATGGAAAACTaGGAGAATTTGATTGAGTTG +
Preference number: 4 (lower is better)
Translates to: CHDSCDVKIKSLPSLWLKLLMEN*ENLIEL
Trigger: CAACTCAATCAAATTCTCTCAGTTTTCCATCAGCAA...TTTAAGCCAAAGGGAAGGCAAGGACTTGATCTTCACATCACATGAATCATGACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
3UTR CAA 72 bp CCATATGTTGAAAAACAATTGCTATTCCAACTACAGTaGCTTCTGCCTTCTAAGGCAGGTGTCATGATTCAT +
Preference number: 4 (lower is better)
Translates to: PYVEKQLLFQLQ*LLPSKAGVMIH
Trigger: ATGAATCATGACACCTGCCTTAGAAGGCAGAAGCAACTGTAGTTGGAATAGCAATTGTTTTTCAACATATGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS GCA 90 bp CTTCCCATTCGCAGCCCGCCTCCCGCCGGGAAGCGGCCCGGCTGCTaGAGAACGGCCGCGCCTGCCCTCCCGGTTTCTCCCGTCCAGTCT +
Preference number: 5 (lower is better)
Translates to: LPIRSPPPAGKRPGC*RTAAPALPVSPVQS
Trigger: AGACTGGACGGGAGAAACCGGGAGGGCAGGCGCGGCCGTTCTGCAGCAGCCGGGCCGCTTCCCGGCGGGAGGCGGGCTGCGAATGGGAAG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518607.1
CDS GCA 90 bp GTCGACGCACTGGGCGCTAGCACACGCCTCAGTGCTGCATGTCCGTaGTGGCCCCTGCCACCGAATGACATGCCCCTGGGTATGCGTCCA +
Preference number: 5 (lower is better)
Translates to: VDALGASTRLSAACP*WPLPPNDMPLGMRP
Trigger: TGGACGCATACCCAGGGGCATGTCATTCGGTGGCAGGGGCCAGCACGGACATGCAGCACTGAGGCGTGTGCTAGCGCCCAGTGCGTCGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497591.5
CDS CCA 90 bp GACGCACTGGGCGCTAGCACACGCCTCAGTGCTGCATGTCCGTGCTaGCCCCTGCCACCGAATGACATGCCCCTGGGTATGCGTCCACCT +
Preference number: 5 (lower is better)
Translates to: DALGASTRLSAACPC*PLPPNDMPLGMRPP
Trigger: AGGTGGACGCATACCCAGGGGCATGTCATTCGGTGGCAGGGGCCAGCACGGACATGCAGCACTGAGGCGTGTGCTAGCGCCCAGTGCGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497591.5
CDS GCA 90 bp GGGTGCAGAGTCTTCCTTTCTGCCCCTGTGCTCGGCTCTCACGCCTaGCCACTCGACCTCACTCCTGCCTCGCTGCTCTCAGGACCGACT +
Preference number: 5 (lower is better)
Translates to: GCRVFLSAPVLGSHA*PLDLTPASLLSGPT
Trigger: AGTCGGTCCTGAGAGCAGCGAGGCAGGAGTGAGGTCGAGTGGGCAGGCGTGAGAGCCGAGCACAGGGGCAGAAAGGAAGACTCTGCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479923.1
CDS GCA 90 bp TGGGCGCTAGCACACGCCTCAGTGCTGCATGTCCGTGCTGGCCCCTaGCACCGAATGACATGCCCCTGGGTATGCGTCCACCTTGAAGGG +
Preference number: 5 (lower is better)
Translates to: WALAHASVLHVRAGP*HRMTCPWVCVHLEG
Trigger: CCCTTCAAGGTGGACGCATACCCAGGGGCATGTCATTCGGTGGCAGGGGCCAGCACGGACATGCAGCACTGAGGCGTGTGCTAGCGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497591.5
CDS CCA 90 bp GCTGTCCTGTATGCTCCAAACAAGTCCGTGCCTGGGTCGACGCACTaGGCGCTAGCACACGCCTCAGTGCTGCATGTCCGTGCTGGCCCC +
Preference number: 5 (lower is better)
Translates to: AVLYAPNKSVPGSTH*ALAHASVLHVRAGP
Trigger: GGGGCCAGCACGGACATGCAGCACTGAGGCGTGTGCTAGCGCCCAGTGCGTCGACCCAGGCACGGACTTGTTTGGAGCATACAGGACAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497591.5
CDS GCA 90 bp TCTCCTTTCCGCTTTCTGGGTGCAGAGTCTTCCTTTCTGCCCCTGTaGTCGGCTCTCACGCCTGCCCACTCGACCTCACTCCTGCCTCGC +
Preference number: 5 (lower is better)
Translates to: SPFRFLGAESSFLPL*SALTPAHSTSLLPR
Trigger: GCGAGGCAGGAGTGAGGTCGAGTGGGCAGGCGTGAGAGCCGAGCACAGGGGCAGAAAGGAAGACTCTGCACCCAGAAAGCGGAAAGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479923.1
CDS GCA 90 bp TCCAGACCCGAGGCCGGAGCCGGACTTGTCCCGGGCCTAGCATGTTaGTTCATCACACGGTCCCCAACCCCTCCTTTCCCTTATTTCTCA +
Preference number: 5 (lower is better)
Translates to: SRPEAGAGLVPGLAC*FITRSPTPPFPYFS
Trigger: TGAGAAATAAGGGAAAGGAGGGGTTGGGGACCGTGTGATGAAGCAACATGCTAGGCCCGGGACAAGTCCGGCTCCGGCCTCGGGTCTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR CAA 90 bp TGTGCAGGTGCTTGCAGCCCTAAGGGGAGAGGTGCAGAATGGGTGGTCCCTTGCCCTCCGTTCCAGGAATaGCCCACCCCTTTCCCTCAT +
Preference number: 5 (lower is better)
Translates to: CAGACSPKGRGAEWVVPCPPFQE*PTPFPH
Trigger: ATGAGGGAAAGGGGTGGGCAATTCCTGGAACGGAGG...GCAAGGGACCACCCATTCTGCACCTCTCCCCTTAGGGCTGCAAGCACCTGCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS TCA 90 bp CCGAGGATCACCACACTCCTTTCCTCCTCCGTCTCCGCCCTGTCCTaGAGGCACGCGGTTCATCCTCATCTCTGGCTGGTGATTCTAGCA +
Preference number: 5 (lower is better)
Translates to: PRITTLLSSSVSALS*RHAVHPHLWLVILA
Trigger: TGCTAGAATCACCAGCCAGAGATGAGGATGAACCGCGTGCCTTCAGGACAGGGCGGAGACGGAGGAGGAAAGGAGTGTGGTGATCCTCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497591.5
CDS CCA 90 bp GTCTTAACGCAGAGCTGTCCTGTATGCTCCAAACAAGTCCGTGCCTaGGTCGACGCACTGGGCGCTAGCACACGCCTCAGTGCTGCATGT +
Preference number: 5 (lower is better)
Translates to: VLTQSCPVCSKQVRA*VDALGASTRLSAAC
Trigger: ACATGCAGCACTGAGGCGTGTGCTAGCGCCCAGTGCGTCGACCCAGGCACGGACTTGTTTGGAGCATACAGGACAGCTCTGCGTTAAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497591.5
CDS-3UTR CAA 90 bp TGCGTCCCCAGCCTGTTAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCACCCCCGGGCCTAGCATGTaGCTTCATCACACGGTCCCC +
Preference number: 5 (lower is better)
Translates to: CVPSLLGILSHRMRQEVTPGPSM*LHHTVP
Trigger: GGGGACCGTGTGATGAAGCAACATGCTAGGCCCGGG...GGTGACCTCCTGTCTCATCCTGTGACTTAGAATGCCTAACAGGCTGGGGACGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR CAA 90 bp GAAGTGGCCAAAACCCACCAAACCCAAAATGGTGATGAGAGTGGCCTCTGGTCGAGGCGCGAGGACCCCTaGAGTCCAGGAGGTCGATGC +
Preference number: 5 (lower is better)
Translates to: EVAKTHQTQNGDESGLWSRREDP*SPGGRC
Trigger: GCATCGACCTCCTGGACTCAAGGGGTCCTCGCGCCT...CGACCAGAGGCCACTCTCATCACCATTTTGGGTTTGGTGGGTTTTGGCCACTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS TCA 90 bp CACACGCCTCAGTGCTGCATGTCCGTGCTGGCCCCTGCCACCGAATaGCATGCCCCTGGGTATGCGTCCACCTTGAAGGGTATTTCATAT +
Preference number: 5 (lower is better)
Translates to: HTPQCCMSVLAPATE*HAPGYASTLKGISY
Trigger: ATATGAAATACCCTTCAAGGTGGACGCATACCCAGGGGCATGTCATTCGGTGGCAGGGGCCAGCACGGACATGCAGCACTGAGGCGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497591.5
CDS GCA 90 bp GCCTCAGTGCTGCATGTCCGTGCTGGCCCCTGCCACCGAATGACATaGCCCTGGGTATGCGTCCACCTTGAAGGGTATTTCATATCTCAG +
Preference number: 5 (lower is better)
Translates to: ASVLHVRAGPCHRMT*PWVCVHLEGYFISQ
Trigger: CTGAGATATGAAATACCCTTCAAGGTGGACGCATACCCAGGGGCATGTCATTCGGTGGCAGGGGCCAGCACGGACATGCAGCACTGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497591.5
CDS CCA 90 bp GTGCTGCATGTCCGTGCTGGCCCCTGCCACCGAATGACATGCCCCTaGGTATGCGTCCACCTTGAAGGGTATTTCATATCTCAGCCATCC +
Preference number: 5 (lower is better)
Translates to: VLHVRAGPCHRMTCP*VCVHLEGYFISQPS
Trigger: GGATGGCTGAGATATGAAATACCCTTCAAGGTGGACGCATACCCAGGGGCATGTCATTCGGTGGCAGGGGCCAGCACGGACATGCAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497591.5
CDS-3UTR CAA 90 bp GTCGAAGTGTGCAGGGTGGAGTCATGGGAGAGGGAGACGAAGCTGTATTTTCATTTCTCGTCCGCCATCTaGCTGCGGAGCCGGTCGCCT +
Preference number: 5 (lower is better)
Translates to: VEVCRVESWERETKLYFHFSSAI*LRSRSP
Trigger: AGGCGACCGGCTCCGCAGCAAGATGGCGGACGAGAA...ATGAAAATACAGCTTCGTCTCCCTCTCCCATGACTCCACCCTGCACACTTCGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS GCA 90 bp CATGTCCGTGCTGGCCCCTGCCACCGAATGACATGCCCCTGGGTATaGGTCCACCTTGAAGGGTATTTCATATCTCAGCCATCCTCCTTC +
Preference number: 5 (lower is better)
Translates to: HVRAGPCHRMTCPWV*VHLEGYFISQPSSF
Trigger: GAAGGAGGATGGCTGAGATATGAAATACCCTTCAAGGTGGACGCATACCCAGGGGCATGTCATTCGGTGGCAGGGGCCAGCACGGACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497591.5
CDS GCA 90 bp GGTGGGGCTGGGGAGGTAGGCAATCTCGACGCAAGCTTCCTCTACTaGCTTCTGTGCAAGAGGGTGTCTCCTCGGAGACAGAATATGATG +
Preference number: 5 (lower is better)
Translates to: GGAGEVGNLDASFLY*LLCKRVSPRRQNMM
Trigger: CATCATATTCTGTCTCCGAGGAGACACCCTCTTGCACAGAAGGCAGTAGAGGAAGCTTGCGTCGAGATTGCCTACCTCCCCAGCCCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497591.5
CDS-3UTR CAA 90 bp ACAGTGGAACGAAGTGGTGTGATCCTGAGTGGGGTCTGTGAAGCACAGCAGGCTGACAAGGAGCTGACATaGAGCCAGAGAGGGAGAGCC +
Preference number: 5 (lower is better)
Translates to: TVERSGVILSGVCEAQQADKELT*SQRGRA
Trigger: GGCTCTCCCTCTCTGGCTCAATGTCAGCTCCTTGTC...AGCCTGCTGTGCTTCACAGACCCCACTCAGGATCACACCACTTCGTTCCACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS TCA 90 bp TCCTTCCCCGCTGCAATGTGTTCCTATCATCAACAGCCTGTCTGCTaGTGTTCCGAGGATCACCACACTCCTTTCCTCCTCCGTCTCCGC +
Preference number: 5 (lower is better)
Translates to: SFPAAMCSYHQQPVC*CSEDHHTPFLLRLR
Trigger: GCGGAGACGGAGGAGGAAAGGAGTGTGGTGATCCTCGGAACATCAGCAGACAGGCTGTTGATGATAGGAACACATTGCAGCGGGGAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497591.5
CDS-3UTR CAA 90 bp ACAGTGGAACGAAGTGGTGTGATCCTGAGTGGGGTCTGTGAAGCACAGCAGGCTTTATTTCTCATCCATTaGGGGACAGCACGCGCGCGC +
Preference number: 5 (lower is better)
Translates to: TVERSGVILSGVCEAQQALFLIH*GTARAR
Trigger: GCGCGCGCGTGCTGTCCCCAAATGGATGAGAAATAA...AGCCTGCTGTGCTTCACAGACCCCACTCAGGATCACACCACTTCGTTCCACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR CAA 90 bp TGTCATGATTCATGTGATGTGAAGATCAAGTCCTTGCCTTCCCTTTGGCTTAAAACCCGGCCCCCGGCCTaGTCCCTCCAGACCCGAGGC +
Preference number: 5 (lower is better)
Translates to: CHDSCDVKIKSLPSLWLKTRPPA*SLQTRG
Trigger: GCCTCGGGTCTGGAGGGACAAGGCCGGGGGCCGGGT...TTTAAGCCAAAGGGAAGGCAAGGACTTGATCTTCACATCACATGAATCATGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR CAA 90 bp TCATTACACTGCTACTCGTTTTCGAGTGGTTCGTTCTGCCCCCTCTTAAGATCTTTCTCGTCCGCCATCTaGCTGCGGAGCCGGTCGCCT +
Preference number: 5 (lower is better)
Translates to: SLHCYSFSSGSFCPLLRSFSSAI*LRSRSP
Trigger: AGGCGACCGGCTCCGCAGCAAGATGGCGGACGAGAA...AGATCTTAAGAGGGGGCAGAACGAACCACTCGAAAACGAGTAGCAGTGTAATGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366523.5
CDS-3UTR CAA 90 bp TGGCATCTCCAAACAGTGGAACGAAGTGGTGTGATCCTGAGTGGGGTCTGTGAAAGGCAGGAGAATCTCTaGAACCCGGGAGGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: WHLQTVERSGVILSGVCERQENL*NPGGGG
Trigger: ACCTCCACCTCCCGGGTTCAAGAGATTCTCCTGCCT...TTCACAGACCCCACTCAGGATCACACCACTTCGTTCCACTGTTTGGAGATGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR CAA 90 bp TGGCCAAAACCCACCAAACCCAAAATGGTGATGAGAGTGGCCTCTGGTCGACCTACGGGTGTGGTCAGGTaGATGCTGTGTCCAAAGAGC +
Preference number: 5 (lower is better)
Translates to: WPKPTKPKMVMRVASGRPTGVVR*MLCPKS
Trigger: GCTCTTTGGACACAGCATCAACCTGACCACACCCGT...AGGTCGACCAGAGGCCACTCTCATCACCATTTTGGGTTTGGTGGGTTTTGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS GCA 90 bp GGTGGGGCTGGGGAGGTAGGCAATCTCGACGCAAGCTTCCTCTACTaGCTTCTGTGCAAGAGGGTGTCTTCTTCAGTCATATACTTGATC +
Preference number: 5 (lower is better)
Translates to: GGAGEVGNLDASFLY*LLCKRVSSSVIYLI
Trigger: GATCAAGTATATGACTGAAGAAGACACCCTCTTGCACAGAAGGCAGTAGAGGAAGCTTGCGTCGAGATTGCCTACCTCCCCAGCCCCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000391837.7
CDS-3UTR CAA 90 bp AGGATAACCACCAAGTTTGTGCAGGTGCTTGCAGCCCTAAGGGGAGAGGTGCAGCTTATCTCATCACTGTaGTATCCCAGGCCCTTCCCT +
Preference number: 5 (lower is better)
Translates to: RITTKFVQVLAALRGEVQLISSL*YPRPFP
Trigger: AGGGAAGGGCCTGGGATACAACAGTGATGAGATAAG...CTGCACCTCTCCCCTTAGGGCTGCAAGCACCTGCACAAACTTGGTGGTTATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR CAA 90 bp TTCATTACACTGCTACTCGTTTTCGAGTGGTTCGTTCTGCCCCCTCTTAAGATCCCCCTCCTGTCCTGTTaGTGCGACGTGGCGTTGCTC +
Preference number: 5 (lower is better)
Translates to: FITLLLVFEWFVLPPLKIPLLSC*CDVALL
Trigger: GAGCAACGCCACGTCGCACAAACAGGACAGGAGGGG...GATCTTAAGAGGGGGCAGAACGAACCACTCGAAAACGAGTAGCAGTGTAATGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000366523.5
CDS GCA 90 bp GGGGAGGTAGGCAATCTCGACGCAAGCTTCCTCTACTGCCTTCTGTaGAAGAGGGTGTCTCCTCGGAGACAGAATATGATGTCATCACTT +
Preference number: 5 (lower is better)
Translates to: GEVGNLDASFLYCLL*KRVSPRRQNMMSSL
Trigger: AAGTGATGACATCATATTCTGTCTCCGAGGAGACACCCTCTTGCACAGAAGGCAGTAGAGGAAGCTTGCGTCGAGATTGCCTACCTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497591.5
CDS-3UTR CAA 90 bp TGCGTCCCCAGCCTGTTAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCACCCCCATAACACCGTCATaGTGTGATGGTCTCTTCTTC +
Preference number: 5 (lower is better)
Translates to: CVPSLLGILSHRMRQEVTPITPS*CDGLFF
Trigger: GAAGAAGAGACCATCACACAATGACGGTGTTATGGG...GGTGACCTCCTGTCTCATCCTGTGACTTAGAATGCCTAACAGGCTGGGGACGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR CAA 90 bp GAAGTGGCCAAAACCCACCAAACCCAAAATGGTGATGAGAGTGGCCTCTGGTCGACTGTGTGCTGTCACTaGCTACTAAGTCACTCTGCC +
Preference number: 5 (lower is better)
Translates to: EVAKTHQTQNGDESGLWSTVCCH*LLSHSA
Trigger: GGCAGAGTGACTTAGTAGCAAGTGACAGCACACAGT...CGACCAGAGGCCACTCTCATCACCATTTTGGGTTTGGTGGGTTTTGGCCACTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR CAA 90 bp TGGCCAAAACCCACCAAACCCAAAATGGTGATGAGAGTGGCCTCTGGTCGACCTTCTTTGCCCTTTTTCTaGTCCGGCTGGGAGAAGTAC +
Preference number: 5 (lower is better)
Translates to: WPKPTKPKMVMRVASGRPSLPFF*SGWEKY
Trigger: GTACTTCTCCCAGCCGGACAAGAAAAAGGGCAAAGA...AGGTCGACCAGAGGCCACTCTCATCACCATTTTGGGTTTGGTGGGTTTTGGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR CAA 90 bp TGCGTCCCCAGCCTGTTAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCACCCGCACTGCTGAAAACTaGGAGGACTTCGACTTTCAA +
Preference number: 5 (lower is better)
Translates to: CVPSLLGILSHRMRQEVTRTAEN*EDFDFQ
Trigger: TTGAAAGTCGAAGTCCTCCAAGTTTTCAGCAGTGCG...GGTGACCTCCTGTCTCATCCTGTGACTTAGAATGCCTAACAGGCTGGGGACGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR CAA 90 bp ACAGTGGAACGAAGTGGTGTGATCCTGAGTGGGGTCTGTGAAGCACAGCAGGCTAGGCTATTTTTCCTGTaGGATGGGACAGACAACGTG +
Preference number: 5 (lower is better)
Translates to: TVERSGVILSGVCEAQQARLFFL*DGTDNV
Trigger: CACGTTGTCTGTCCCATCCAACAGGAAAAATAGCCT...AGCCTGCTGTGCTTCACAGACCCCACTCAGGATCACACCACTTCGTTCCACTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR CAA 90 bp TGCGTCCCCAGCCTGTTAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCACCGGGGAGGAAAGAGCCTaGATATCATCCCATATGTTG +
Preference number: 5 (lower is better)
Translates to: CVPSLLGILSHRMRQEVTGEERA*ISSHML
Trigger: CAACATATGGGATGATATCAAGGCTCTTTCCTCCCC...GGTGACCTCCTGTCTCATCCTGTGACTTAGAATGCCTAACAGGCTGGGGACGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR CAA 90 bp ACAGTGGAACGAAGTGGTGTGATCCTGAGTGGGGTCTGTGAAGCACAGCAGGCTTCATGTCAGAGGCATTaGAATCAGAGTGATGAGGGG +
Preference number: 5 (lower is better)
Translates to: TVERSGVILSGVCEAQQASCQRH*NQSDEG
Trigger: CCCCTCATCACTCTGATTCAAATGCCTCTGACATGA...AGCCTGCTGTGCTTCACAGACCCCACTCAGGATCACACCACTTCGTTCCACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS TCA 90 bp TACTATTATCTCGTCCTTTCCCAGAGAAAGCGACAGCACAGCCTATaGCAACCGAAGCTAAAACGGAAAAACTGGGCCGGGCGCAAGAGG +
Preference number: 5 (lower is better)
Translates to: YYYLVLSQRKRQHSL*QPKLKRKNWAGRKR
Trigger: CCTCTTGCGCCCGGCCCAGTTTTTCCGTTTTAGCTTCGGTTGTCATAGGCTGTGCTGTCGCTTTCTCTGGGAAAGGACGAGATAATAGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000391837.7
CDS-3UTR CAA 90 bp ACAGTGGAACGAAGTGGTGTGATCCTGAGTGGGGTCTGTGAAGCACAGCAGGCTGTGAAGATCAAGTCCTaGCCTTCCCTTTGGCTTAAA +
Preference number: 5 (lower is better)
Translates to: TVERSGVILSGVCEAQQAVKIKS*PSLWLK
Trigger: TTTAAGCCAAAGGGAAGGCAAGGACTTGATCTTCAC...AGCCTGCTGTGCTTCACAGACCCCACTCAGGATCACACCACTTCGTTCCACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR CAA 90 bp ACAGTGGAACGAAGTGGTGTGATCCTGAGTGGGGTCTGTGAAGCACAGCAGGCTCTATTCCAACTACAGTaGCTTCTGCCTTCTAAGGCA +
Preference number: 5 (lower is better)
Translates to: TVERSGVILSGVCEAQQALFQLQ*LLPSKA
Trigger: TGCCTTAGAAGGCAGAAGCAACTGTAGTTGGAATAG...AGCCTGCTGTGCTTCACAGACCCCACTCAGGATCACACCACTTCGTTCCACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS TCA 90 bp ACAGAGAGAGAAGGCAGGTGCAGAATCACAAAGCATCTGAACCCATaGGGAGGTAGACGCAAAGGAGTAGGAGACACACAGCAGGATCAA +
Preference number: 5 (lower is better)
Translates to: TEREGRCRITKHLNP*GGRRKGVGDTQQDQ
Trigger: TTGATCCTGCTGTGTGTCTCCTACTCCTTTGCGTCTACCTCCTCATGGGTTCAGATGCTTTGTGATTCTGCACCTGCCTTCTCTCTCTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479260.1
CDS-3UTR CAA 90 bp TGTCATGATTCATGTGATGTGAAGATCAAGTCCTTGCCTTCCCTTTGGCTTAAACCCCTCCTGTCCTGTTaGTGCGACGTGGCGTTGCTC +
Preference number: 5 (lower is better)
Translates to: CHDSCDVKIKSLPSLWLKPLLSC*CDVALL
Trigger: GAGCAACGCCACGTCGCACAAACAGGACAGGAGGGG...TTTAAGCCAAAGGGAAGGCAAGGACTTGATCTTCACATCACATGAATCATGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR CAA 90 bp TTCACCCTTCGTTCAAGGTGTACCACATTCAACGCCATGCTTCTGGGTACTTCTGGGGTTTTTAAGGGTTaGGGAGTGGAGACTGGAGTG +
Preference number: 5 (lower is better)
Translates to: FTLRSRCTTFNAMLLGTSGVFKG*GVETGV
Trigger: CACTCCAGTCTCCACTCCCAAACCCTTAAAAACCCC...AGAAGTACCCAGAAGCATGGCGTTGAATGTGGTACACCTTGAACGAAGGGTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR CAA 90 bp TTCACCCTTCGTTCAAGGTGTACCACATTCAACGCCATGCTTCTGGGTACTTCTAGAATGGGTGGTCCCTaGCTAAGCAGAGGCTTTGGA +
Preference number: 5 (lower is better)
Translates to: FTLRSRCTTFNAMLLGTSRMGGP*LSRGFG
Trigger: TCCAAAGCCTCTGCTTAGCAAGGGACCACCCATTCT...AGAAGTACCCAGAAGCATGGCGTTGAATGTGGTACACCTTGAACGAAGGGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR CAA 90 bp TGCGTCCCCAGCCTGTTAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCACCTCTTCAGTCATATACTaGATCAGCTCGTCCTTAGTA +
Preference number: 5 (lower is better)
Translates to: CVPSLLGILSHRMRQEVTSSVIY*ISSSLV
Trigger: TACTAAGGACGAGCTGATCAAGTATATGACTGAAGA...GGTGACCTCCTGTCTCATCCTGTGACTTAGAATGCCTAACAGGCTGGGGACGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS GCA 90 bp GGAAGGAAGATAACTGAGTGGTTAAAGCACAAGTTTGGATCCACATaGTGGCTGCCTCTCACGAGCTCTGAGATCTTGAGCAAGTCACTT +
Preference number: 5 (lower is better)
Translates to: GRKITEWLKHKFGST*WLPLTSSEILSKSL
Trigger: AAGTGACTTGCTCAAGATCTCAGAGCTCGTGAGAGGCAGCCAGCATGTGGATCCAAACTTGTGCTTTAACCACTCAGTTATCTTCCTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425550.5
ENST00000427529.1
CDS CCA 90 bp AGGAAGATAACTGAGTGGTTAAAGCACAAGTTTGGATCCACATGCTaGCTGCCTCTCACGAGCTCTGAGATCTTGAGCAAGTCACTTCAC +
Preference number: 5 (lower is better)
Translates to: RKITEWLKHKFGSTC*LPLTSSEILSKSLH
Trigger: GTGAAGTGACTTGCTCAAGATCTCAGAGCTCGTGAGAGGCAGCCAGCATGTGGATCCAAACTTGTGCTTTAACCACTCAGTTATCTTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000425550.5
ENST00000427529.1
CDS-3UTR CAA 90 bp TGGCATCTCCAAACAGTGGAACGAAGTGGTGTGATCCTGAGTGGGGTCTGTGAAGAGAATTTGATTGAGTaGAGGCATAGGATAACCACC +
Preference number: 5 (lower is better)
Translates to: WHLQTVERSGVILSGVCEENLIE*RHRITT
Trigger: GGTGGTTATCCTATGCCTCAACTCAATCAAATTCTC...TTCACAGACCCCACTCAGGATCACACCACTTCGTTCCACTGTTTGGAGATGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR CAA 90 bp TGCGTCCCCAGCCTGTTAGGCATTCTAAGTCACAGGATGAGACAGGAGGTCACCCCAGAAATAAGCTCCTaGACAAGTTTGTTTTCACAA +
Preference number: 5 (lower is better)
Translates to: CVPSLLGILSHRMRQEVTPEISS*TSLFSQ
Trigger: TTGTGAAAACAAACTTGTCAAGGAGCTTATTTCTGG...GGTGACCTCCTGTCTCATCCTGTGACTTAGAATGCCTAACAGGCTGGGGACGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR CAA 90 bp TTCACCCTTCGTTCAAGGTGTACCACATTCAACGCCATGCTTCTGGGTACTTCTGAAGGGGAACTGCTATaGGACATGGGGATTCTTTTT +
Preference number: 5 (lower is better)
Translates to: FTLRSRCTTFNAMLLGTSEGELL*DMGILF
Trigger: AAAAAGAATCCCCATGTCCAATAGCAGTTCCCCTTC...AGAAGTACCCAGAAGCATGGCGTTGAATGTGGTACACCTTGAACGAAGGGTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS TCA 90 bp TCTACTGCCTTCTGTGCAAGAGGGTGTCTCCTCGGAGACAGAATATaGTGTCATCACTTGATCATCAAGAGATTAGGGTTCATTCACCAG +
Preference number: 5 (lower is better)
Translates to: STAFCARGCLLGDRI*CHHLIIKRLGFIHQ
Trigger: CTGGTGAATGAACCCTAATCTCTTGATGATCAAGTGATGACATCATATTCTGTCTCCGAGGAGACACCCTCTTGCACAGAAGGCAGTAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497591.5
CDS CCA 90 bp ATTCTAGCATGCACGGCCGAGCCAGTGGCACATCAGGTCTCTATTTaGATTTTACCTTGGGAAAATCTCAGGTTATCCTTCTTCAGTCAT +
Preference number: 5 (lower is better)
Translates to: ILACTAEPVAHQVSI*ILPWENLRLSFFSH
Trigger: ATGACTGAAGAAGGATAACCTGAGATTTTCCCAAGGTAAAATCCAAATAGAGACCTGATGTGCCACTGGCTCGGCCGTGCATGCTAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497591.5
CDS-3UTR CAA 90 bp GTCGAAGTGTGCAGGGTGGAGTCATGGGAGAGGGAGACGAAGCTGTATTTTCATACAGAAGGCCACATATaGTATGATTGTGTTTATGTG +
Preference number: 5 (lower is better)
Translates to: VEVCRVESWERETKLYFHTEGHI*YDCVYV
Trigger: CACATAAACACAATCATACAATATGTGGCCTTCTGT...ATGAAAATACAGCTTCGTCTCCCTCTCCCATGACTCCACCCTGCACACTTCGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR CAA 90 bp ATAACTGAGTGGTTAAAGCACAAGTTTGGATCCACATGCTGGCTGCCTCTCACGTTGAAGCCCCAGTATTaGATGAAAGATGGAAGGAAG +
Preference number: 5 (lower is better)
Translates to: ITEWLKHKFGSTCWLPLTLKPQY*MKDGRK
Trigger: CTTCCTTCCATCTTTCATCAAATACTGGGGCTTCAA...CGTGAGAGGCAGCCAGCATGTGGATCCAAACTTGTGCTTTAACCACTCAGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425550.5
ENST00000427529.1
CDS-3UTR CAA 90 bp ATAACTGAGTGGTTAAAGCACAAGTTTGGATCCACATGCTGGCTGCCTCTCACGTACCAGAGGATTAACTaGAAGCCCCAGTATTTGATG +
Preference number: 5 (lower is better)
Translates to: ITEWLKHKFGSTCWLPLTYQRIN*KPQYLM
Trigger: CATCAAATACTGGGGCTTCAAGTTAATCCTCTGGTA...CGTGAGAGGCAGCCAGCATGTGGATCCAAACTTGTGCTTTAACCACTCAGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425550.5
ENST00000427529.1
CDS-3UTR CAA 90 bp AGTGGTTCGTTCTGCCCCCTCTTAAGATCTTTACATGCCAAACCTTGGGTAATTTTCTTCCATTTCCTCTaGAGAAAAAGGCTCACCTTC +
Preference number: 5 (lower is better)
Translates to: SGSFCPLLRSLHAKPWVIFFHFL*RKRLTF
Trigger: GAAGGTGAGCCTTTTTCTCAAGAGGAAATGGAAGAA...AATTACCCAAGGTTTGGCATGTAAAGATCTTAAGAGGGGGCAGAACGAACCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000366523.5
CDS-3UTR CAA 90 bp TGTCATGATTCATGTGATGTGAAGATCAAGTCCTTGCCTTCCCTTTGGCTTAAATGTCCAAAGAGCAGTTaGTGTAGACGAGACGTCTCT +
Preference number: 5 (lower is better)
Translates to: CHDSCDVKIKSLPSLWLKCPKSS*CRRDVS
Trigger: AGAGACGTCTCGTCTACACAAACTGCTCTTTGGACA...TTTAAGCCAAAGGGAAGGCAAGGACTTGATCTTCACATCACATGAATCATGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS TCA 90 bp TCTGCTACTATTATCTCCTGTGTTCCCCATAACACCGTCATTGTGTaGTGGTCTCTTCTTCCACCTTCCATTAGATGTTCGATCAGTAAA +
Preference number: 5 (lower is better)
Translates to: SATIISCVPHNTVIV*WSLLPPSIRCSISK
Trigger: TTTACTGATCGAACATCTAATGGAAGGTGGAAGAAGAGACCATCACACAATGACGGTGTTATGGGGAACACAGGAGATAATAGTAGCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366521.7
ENST00000366522.6
ENST00000479260.1
CDS TCA 90 bp AATTGTTCCAATCTCTCCTGTGTTCCCCATAACACCGTCATTGTGTaGTGGTCTCTTCTTCCACCTTCCATTAGATGTTCGATCAGTAAA +
Preference number: 5 (lower is better)
Translates to: NCSNLSCVPHNTVIV*WSLLPPSIRCSISK
Trigger: TTTACTGATCGAACATCTAATGGAAGGTGGAAGAAGAGACCATCACACAATGACGGTGTTATGGGGAACACAGGAGAGATTGGAACAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549220.5
CDS-3UTR CAA 90 bp AGTGGTTCGTTCTGCCCCCTCTTAAGATCTTTACATGCCAAACCTTGGGTAATTTTGATTCTGGATCAATaGCAGCAGACAACATTTCTT +
Preference number: 5 (lower is better)
Translates to: SGSFCPLLRSLHAKPWVILILDQ*QQTTFL
Trigger: AAGAAATGTTGTCTGCTGCAATTGATCCAGAATCAA...AATTACCCAAGGTTTGGCATGTAAAGATCTTAAGAGGGGGCAGAACGAACCACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366523.5
CDS-3UTR CAA 90 bp TGTCATGATTCATGTGATGTGAAGATCAAGTCCTTGCCTTCCCTTTGGCTTAAACCCATGCATAGGAATTaGGTGGTAATTCCTATCATC +
Preference number: 5 (lower is better)
Translates to: CHDSCDVKIKSLPSLWLKPMHRN*VVIPII
Trigger: GATGATAGGAATTACCACCAAATTCCTATGCATGGG...TTTAAGCCAAAGGGAAGGCAAGGACTTGATCTTCACATCACATGAATCATGACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS-3UTR CAA 90 bp TCGTTCTGCCCCCTCTTAAGATCTTTACATGCCAAACCTTGGGTAATTAAGTCAGGCGTTGCTCGATTTTaGTTGTTAACTGCAGATTTT +
Preference number: 5 (lower is better)
Translates to: SFCPLLRSLHAKPWVIKSGVARF*LLTADF
Trigger: AAAATCTGCAGTTAACAACAAAAATCGAGCAACGCC...TGACTTAATTACCCAAGGTTTGGCATGTAAAGATCTTAAGAGGGGGCAGAACGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000366523.5
CDS-3UTR CAA 90 bp TCGTTCTGCCCCCTCTTAAGATCTTTACATGCCAAACCTTGGGTAATTAAGTCACCTTCCACACTCAGATaGATGAAGCATTTGTTATTG +
Preference number: 5 (lower is better)
Translates to: SFCPLLRSLHAKPWVIKSPSTLR*MKHLLL
Trigger: CAATAACAAATGCTTCATCAATCTGAGTGTGGAAGG...TGACTTAATTACCCAAGGTTTGGCATGTAAAGATCTTAAGAGGGGGCAGAACGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000366523.5
CDS GCA 90 bp ATTACATTCCACAAAGCCAACTCTATGAGACTAAACAGAGAGGATTaGCTTGAGACAAGATGTGAAGTTGAACATCAGTCCGAACTTTTG +
Preference number: 5 (lower is better)
Translates to: ITFHKANSMRLNRED*LETRCEVEHQSELL
Trigger: CAAAAGTTCGGACTGATGTTCAACTTCACATCTTGTCTCAAGGCAATCCTCTCTGTTTAGTCTCATAGAGTTGGCTTTGTGGAATGTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000391837.7
ENST00000497591.5
CDS CCA 90 bp AAGGTACGTTTATTCTGCAACTTAGGAGATAAAATGAGATTTCTGTaGGGAGTCTATGTTGTGCTTTCTGGTGGCCTTAAAAGAAACAGA +
Preference number: 5 (lower is better)
Translates to: KVRLFCNLGDKMRFL*GVYVVLSGGLKRNR
Trigger: TCTGTTTCTTTTAAGGCCACCAGAAAGCACAACATAGACTCCCCACAGAAATCTCATTTTATCTCCTAAGTTGCAGAATAAACGTACCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000391837.7
ENST00000497591.5
CDS GCA 72 bp CGCAGCCCGCCTCCCGCCGGGAAGCGGCCCGGCTGCTaGAGAACGGCCGCGCCTGCCCTCCCGGTTTCTCCC +
Preference number: 6 (lower is better)
Translates to: RSPPPAGKRPGC*RTAAPALPVSP
Trigger: GGGAGAAACCGGGAGGGCAGGCGCGGCCGTTCTGCAGCAGCCGGGCCGCTTCCCGGCGGGAGGCGGGCTGCG
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518607.1
CDS GCA 72 bp TCCGCCATCTTGCTGCGGAGCCGGTCGCCTGGGAGATaGCTAACGATAACCTCGGCCGCGGTGTCCCGGCCT +
Preference number: 6 (lower is better)
Translates to: SAILLRSRSPGR*LTITSAAVSRP
Trigger: AGGCCGGGACACCGCGGCCGAGGTTATCGTTAGGCATCTCCCAGGCGACCGGCTCCGCAGCAAGATGGCGGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000366522.6
ENST00000366523.5
ENST00000447569.6
ENST00000473686.5
ENST00000497591.5
ENST00000518607.1
CDS GCA 72 bp CTGGGCGCTAGCACACGCCTCAGTGCTGCATGTCCGTaGTGGCCCCTGCCACCGAATGACATGCCCCTGGGT +
Preference number: 6 (lower is better)
Translates to: LGASTRLSAACP*WPLPPNDMPLG
Trigger: ACCCAGGGGCATGTCATTCGGTGGCAGGGGCCAGCACGGACATGCAGCACTGAGGCGTGTGCTAGCGCCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497591.5
CDS GCA 72 bp GCACACGCCTCAGTGCTGCATGTCCGTGCTGGCCCCTaGCACCGAATGACATGCCCCTGGGTATGCGTCCAC +
Preference number: 6 (lower is better)
Translates to: AHASVLHVRAGP*HRMTCPWVCVH
Trigger: GTGGACGCATACCCAGGGGCATGTCATTCGGTGGCAGGGGCCAGCACGGACATGCAGCACTGAGGCGTGTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497591.5
CDS CCA 72 bp CTTCTCGTCCGCCATCTTGCTGCGGAGCCGGTCGCCTaGGAGATGCCTAACGATAACCTCGGCCGCGGTGTC +
Preference number: 6 (lower is better)
Translates to: LLVRHLAAEPVA*EMPNDNLGRGV
Trigger: GACACCGCGGCCGAGGTTATCGTTAGGCATCTCCCAGGCGACCGGCTCCGCAGCAAGATGGCGGACGAGAAG
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000366521.7
ENST00000366522.6
ENST00000366523.5
ENST00000447569.6
ENST00000473686.5
ENST00000497591.5
ENST00000518607.1
CDS CCA 72 bp GGCGCTAGCACACGCCTCAGTGCTGCATGTCCGTGCTaGCCCCTGCCACCGAATGACATGCCCCTGGGTATG +
Preference number: 6 (lower is better)
Translates to: GASTRLSAACPC*PLPPNDMPLGM
Trigger: CATACCCAGGGGCATGTCATTCGGTGGCAGGGGCCAGCACGGACATGCAGCACTGAGGCGTGTGCTAGCGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497591.5
CDS CAA 72 bp ATCCCAGGCCCTTCCCTGTCCTTCTCGTCCGCCATCTaGCTGCGGAGCCGGTCGCCTGGGAGATGCCTAACG +
Preference number: 6 (lower is better)
Translates to: IPGPSLSFSSAI*LRSRSPGRCLT
Trigger: CGTTAGGCATCTCCCAGGCGACCGGCTCCGCAGCAAGATGGCGGACGAGAAGGACAGGGAAGGGCCTGGGAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366521.7
ENST00000366522.6
CDS CAA 72 bp CGAGGCCGGAGCCGGACTTGTCCCGGGCCTAGCATGTaGCTTCATCACACGGTCCCCAACCCCTCCTTTCCC +
Preference number: 6 (lower is better)
Translates to: RGRSRTCPGPSM*LHHTVPNPSFP
Trigger: GGGAAAGGAGGGGTTGGGGACCGTGTGATGAAGCAACATGCTAGGCCCGGGACAAGTCCGGCTCCGGCCTCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS GCA 72 bp GAGGCCGGAGCCGGACTTGTCCCGGGCCTAGCATGTTaGTTCATCACACGGTCCCCAACCCCTCCTTTCCCT +
Preference number: 6 (lower is better)
Translates to: EAGAGLVPGLAC*FITRSPTPPFP
Trigger: AGGGAAAGGAGGGGTTGGGGACCGTGTGATGAAGCAACATGCTAGGCCCGGGACAAGTCCGGCTCCGGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS GCA 72 bp GTCTTCCTTTCTGCCCCTGTGCTCGGCTCTCACGCCTaGCCACTCGACCTCACTCCTGCCTCGCTGCTCTCA +
Preference number: 6 (lower is better)
Translates to: VFLSAPVLGSHA*PLDLTPASLLS
Trigger: TGAGAGCAGCGAGGCAGGAGTGAGGTCGAGTGGGCAGGCGTGAGAGCCGAGCACAGGGGCAGAAAGGAAGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479923.1
CDS GCA 72 bp CGCTTTCTGGGTGCAGAGTCTTCCTTTCTGCCCCTGTaGTCGGCTCTCACGCCTGCCCACTCGACCTCACTC +
Preference number: 6 (lower is better)
Translates to: RFLGAESSFLPL*SALTPAHSTSL
Trigger: GAGTGAGGTCGAGTGGGCAGGCGTGAGAGCCGAGCACAGGGGCAGAAAGGAAGACTCTGCACCCAGAAAGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479923.1
CDS CAA 72 bp CCTACCTTACCTTCCCTGTCCTTCTCGTCCGCCATCTaGCTGCGGAGCCGGTCGCCTGGGAGATGCCTAACG +
Preference number: 6 (lower is better)
Translates to: PTLPSLSFSSAI*LRSRSPGRCLT
Trigger: CGTTAGGCATCTCCCAGGCGACCGGCTCCGCAGCAAGATGGCGGACGAGAAGGACAGGGAAGGTAAGGTAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000518607.1
CDS CAA 90 bp CACTGTTGTATCCCAGGCCCTTCCCTGTCCTTCTCGTCCGCCATCTaGCTGCGGAGCCGGTCGCCTGGGAGATGCCTAACGATAACCTCG +
Preference number: 6 (lower is better)
Translates to: HCCIPGPSLSFSSAI*LRSRSPGRCLTITS
Trigger: CGAGGTTATCGTTAGGCATCTCCCAGGCGACCGGCTCCGCAGCAAGATGGCGGACGAGAAGGACAGGGAAGGGCCTGGGATACAACAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366521.7
ENST00000366522.6
CDS CAA 90 bp CTCCAGACCCGAGGCCGGAGCCGGACTTGTCCCGGGCCTAGCATGTaGCTTCATCACACGGTCCCCAACCCCTCCTTTCCCTTATTTCTC +
Preference number: 6 (lower is better)
Translates to: LQTRGRSRTCPGPSM*LHHTVPNPSFPLFL
Trigger: GAGAAATAAGGGAAAGGAGGGGTTGGGGACCGTGTGATGAAGCAACATGCTAGGCCCGGGACAAGTCCGGCTCCGGCCTCGGGTCTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000366522.6
CDS GCA 72 bp GGAGGTGGAGGTTGCAACGAGCCAAGATCACGCCACTaGACTTCAGCCTGGGCGACGGAGCGAAACTCCATC +
Preference number: 6 (lower is better)
Translates to: GGGGCNEPRSRH*TSAWATERNSI
Trigger: GATGGAGTTTCGCTCCGTCGCCCAGGCTGAAGTGCAGTGGCGTGATCTTGGCTCGTTGCAACCTCCACCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366522.6
ENST00000479923.1
ENST00000487845.5
CDS CCA 72 bp TATGCTCCAAACAAGTCCGTGCCTGGGTCGACGCACTaGGCGCTAGCACACGCCTCAGTGCTGCATGTCCGT +
Preference number: 6 (lower is better)
Translates to: YAPNKSVPGSTH*ALAHASVLHVR
Trigger: ACGGACATGCAGCACTGAGGCGTGTGCTAGCGCCCAGTGCGTCGACCCAGGCACGGACTTGTTTGGAGCATA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497591.5
CDS CCA 72 bp CAGAGCTGTCCTGTATGCTCCAAACAAGTCCGTGCCTaGGTCGACGCACTGGGCGCTAGCACACGCCTCAGT +
Preference number: 6 (lower is better)
Translates to: QSCPVCSKQVRA*VDALGASTRLS
Trigger: ACTGAGGCGTGTGCTAGCGCCCAGTGCGTCGACCCAGGCACGGACTTGTTTGGAGCATACAGGACAGCTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497591.5
CDS CAA 72 bp TCCAATCTCTCTTCCCTGTCCTTCTCGTCCGCCATCTaGCTGCGGAGCCGGTCGCCTGGGAGATGCCTAACG +
Preference number: 6 (lower is better)
Translates to: SNLSSLSFSSAI*LRSRSPGRCLT
Trigger: CGTTAGGCATCTCCCAGGCGACCGGCTCCGCAGCAAGATGGCGGACGAGAAGGACAGGGAAGAGAGATTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000473686.5
ENST00000497591.5
CDS GCA 72 bp CTGCATGTCCGTGCTGGCCCCTGCCACCGAATGACATaGCCCTGGGTATGCGTCCACCTTGAAGGGTATTTC +
Preference number: 6 (lower is better)
Translates to: LHVRAGPCHRMT*PWVCVHLEGYF
Trigger: GAAATACCCTTCAAGGTGGACGCATACCCAGGGGCATGTCATTCGGTGGCAGGGGCCAGCACGGACATGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497591.5
CDS GCA 72 bp GGGGAGGTAGGCAATCTCGACGCAAGCTTCCTCTACTaGCTTCTGTGCAAGAGGGTGTCTCCTCGGAGACAG +
Preference number: 6 (lower is better)
Translates to: GEVGNLDASFLY*LLCKRVSPRRQ
Trigger: CTGTCTCCGAGGAGACACCCTCTTGCACAGAAGGCAGTAGAGGAAGCTTGCGTCGAGATTGCCTACCTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497591.5
CDS CAA 72 bp ACTATTATCTCTTCCCTGTCCTTCTCGTCCGCCATCTaGCTGCGGAGCCGGTCGCCTGGGAGATGCCTAACG +
Preference number: 6 (lower is better)
Translates to: TIISSLSFSSAI*LRSRSPGRCLT
Trigger: CGTTAGGCATCTCCCAGGCGACCGGCTCCGCAGCAAGATGGCGGACGAGAAGGACAGGGAAGAGATAATAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366523.5
ENST00000447569.6
CDS GCA 72 bp ACGGAGCGAAACTCCATCTCCTTTCCGCTTTCTGGGTaGAGAGTCTTCCTTTCTGCCCCTGTGCTCGGCTCT +
Preference number: 6 (lower is better)
Translates to: TERNSISFPLSG*RVFLSAPVLGS
Trigger: AGAGCCGAGCACAGGGGCAGAAAGGAAGACTCTGCACCCAGAAAGCGGAAAGGAGATGGAGTTTCGCTCCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479923.1
CDS GCA 72 bp GCTGGCCCCTGCCACCGAATGACATGCCCCTGGGTATaGGTCCACCTTGAAGGGTATTTCATATCTCAGCCA +
Preference number: 6 (lower is better)
Translates to: AGPCHRMTCPWV*VHLEGYFISQP
Trigger: TGGCTGAGATATGAAATACCCTTCAAGGTGGACGCATACCCAGGGGCATGTCATTCGGTGGCAGGGGCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497591.5
CDS CCA 72 bp GTCCGTGCTGGCCCCTGCCACCGAATGACATGCCCCTaGGTATGCGTCCACCTTGAAGGGTATTTCATATCT +
Preference number: 6 (lower is better)
Translates to: VRAGPCHRMTCP*VCVHLEGYFIS
Trigger: AGATATGAAATACCCTTCAAGGTGGACGCATACCCAGGGGCATGTCATTCGGTGGCAGGGGCCAGCACGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497591.5
CDS TCA 72 bp GTTTGGATCCACATGCTGGCTGCCTCTCACGAGCTCTaGGATCTTGAGCAAGTCACTTCACAGCTCCCCACC +
Preference number: 6 (lower is better)
Translates to: VWIHMLAASHEL*DLEQVTSQLPT
Trigger: GGTGGGGAGCTGTGAAGTGACTTGCTCAAGATCTCAGAGCTCGTGAGAGGCAGCCAGCATGTGGATCCAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000425550.5
ENST00000427529.1
CDS GCA 72 bp GCGGTTCATCCTCATCTCTGGCTGGTGATTCTAGCATaGACGGCCGAGCCAGTGGCACATCAGGTCTCTATT +
Preference number: 6 (lower is better)
Translates to: AVHPHLWLVILA*TAEPVAHQVSI
Trigger: AATAGAGACCTGATGTGCCACTGGCTCGGCCGTGCATGCTAGAATCACCAGCCAGAGATGAGGATGAACCGC
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497591.5
CDS CAA 90 bp AATTCTGCTACTATTATCTCTTCCCTGTCCTTCTCGTCCGCCATCTaGCTGCGGAGCCGGTCGCCTGGGAGATGCCTAACGATAACCTCG +
Preference number: 6 (lower is better)
Translates to: NSATIISSLSFSSAI*LRSRSPGRCLTITS
Trigger: CGAGGTTATCGTTAGGCATCTCCCAGGCGACCGGCTCCGCAGCAAGATGGCGGACGAGAAGGACAGGGAAGAGATAATAGTAGCAGAATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000366523.5
ENST00000447569.6
CDS TCA 72 bp CTCGTCCTTTCCCAGAGAAAGCGACAGCACAGCCTATaGCAACCGAAGCTAAAACGGAAAAACTGGGCCGGG +
Preference number: 6 (lower is better)
Translates to: LVLSQRKRQHSL*QPKLKRKNWAG
Trigger: CCCGGCCCAGTTTTTCCGTTTTAGCTTCGGTTGTCATAGGCTGTGCTGTCGCTTTCTCTGGGAAAGGACGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000391837.7
CDS TCA 72 bp CCACCGAATGACATGCCCCTGGGTATGCGTCCACCTTaGAGGGTATTTCATATCTCAGCCATCCTCCTTCCC +
Preference number: 6 (lower is better)
Translates to: PPNDMPLGMRPP*RVFHISAILLP
Trigger: GGGAAGGAGGATGGCTGAGATATGAAATACCCTTCAAGGTGGACGCATACCCAGGGGCATGTCATTCGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497591.5
CDS GCA 72 bp AATGGCTTACAGGTCTTAACGCAGAGCTGTCCTGTATaGTCCAAACAAGTCCGTGCCTGGGTCGACGCACTG +
Preference number: 6 (lower is better)
Translates to: NGLQVLTQSCPV*SKQVRAWVDAL
Trigger: CAGTGCGTCGACCCAGGCACGGACTTGTTTGGAGCATACAGGACAGCTCTGCGTTAAGACCTGTAAGCCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497591.5
CDS CAA 72 bp TCGATCAGTAAAGTCCGAGGCCTTATCTCATCACTGTaGTATCCCAGGCCCTTCCCTGTCCTTCTCGTCCGC +
Preference number: 6 (lower is better)
Translates to: SISKVRGLISSL*YPRPFPVLLVR
Trigger: GCGGACGAGAAGGACAGGGAAGGGCCTGGGATACAACAGTGATGAGATAAGGCCTCGGACTTTACTGATCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000366521.7
ENST00000366522.6
ENST00000549220.5
CDS GCA 72 bp GGGGAGGTAGGCAATCTCGACGCAAGCTTCCTCTACTaGCTTCTGTGCAAGAGGGTGTCTTCTTCAGTCATA +
Preference number: 6 (lower is better)
Translates to: GEVGNLDASFLY*LLCKRVSSSVI
Trigger: TATGACTGAAGAAGACACCCTCTTGCACAGAAGGCAGTAGAGGAAGCTTGCGTCGAGATTGCCTACCTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000391837.7
CDS GCA 72 bp GGCAATCTCGACGCAAGCTTCCTCTACTGCCTTCTGTaGAAGAGGGTGTCTCCTCGGAGACAGAATATGATG +
Preference number: 6 (lower is better)
Translates to: GNLDASFLYCLL*KRVSPRRQNMM
Trigger: CATCATATTCTGTCTCCGAGGAGACACCCTCTTGCACAGAAGGCAGTAGAGGAAGCTTGCGTCGAGATTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497591.5
CDS GCA 72 bp GATACGCCTGGCTTCTCCTCCTCTGCAATCAGATCATaGAGCTCTCCTTCCGTAGGACAGCATCCTAATGAC +
Preference number: 6 (lower is better)
Translates to: DTPGFSSSAIRS*SSPSVGQHPND
Trigger: GTCATTAGGATGCTGTCCTACGGAAGGAGAGCTGCATGATCTGATTGCAGAGGAGGAGAAGCCAGGCGTATC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000495271.5
CDS TCA 72 bp GCTGCAATGTGTTCCTATCATCAACAGCCTGTCTGCTaGTGTTCCGAGGATCACCACACTCCTTTCCTCCTC +
Preference number: 6 (lower is better)
Translates to: AAMCSYHQQPVC*CSEDHHTPFLL
Trigger: GAGGAGGAAAGGAGTGTGGTGATCCTCGGAACATCAGCAGACAGGCTGTTGATGATAGGAACACATTGCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497591.5
CDS GCA 72 bp AGGGTATTTCATATCTCAGCCATCCTCCTTCCCCGCTaGAATGTGTTCCTATCATCAACAGCCTGTCTGCTG +
Preference number: 6 (lower is better)
Translates to: RVFHISAILLPR*NVFLSSTACLL
Trigger: CAGCAGACAGGCTGTTGATGATAGGAACACATTGCAGCGGGGAAGGAGGATGGCTGAGATATGAAATACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497591.5
CDS CCA 72 bp TGCACGGCCGAGCCAGTGGCACATCAGGTCTCTATTTaGATTTTACCTTGGGAAAATCTCAGGTTATCCTTC +
Preference number: 6 (lower is better)
Translates to: CTAEPVAHQVSI*ILPWENLRLSF
Trigger: GAAGGATAACCTGAGATTTTCCCAAGGTAAAATCCAAATAGAGACCTGATGTGCCACTGGCTCGGCCGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497591.5
CDS CAA 90 bp GATTCTAGCATGCACGGCCGAGCCAGTGGCACATCAGGTCTCTATTaGGATTTTACCTTGGGAAAATCTCAGGTTATCCTTCTTCAGTCA +
Preference number: 6 (lower is better)
Translates to: DSSMHGRASGTSGLY*DFTLGKSQVILLQS
Trigger: TGACTGAAGAAGGATAACCTGAGATTTTCCCAAGGTAAAATCCAAATAGAGACCTGATGTGCCACTGGCTCGGCCGTGCATGCTAGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497591.5
CDS CAA 72 bp ATGCACGGCCGAGCCAGTGGCACATCAGGTCTCTATTaGGATTTTACCTTGGGAAAATCTCAGGTTATCCTT +
Preference number: 6 (lower is better)
Translates to: MHGRASGTSGLY*DFTLGKSQVIL
Trigger: AAGGATAACCTGAGATTTTCCCAAGGTAAAATCCAAATAGAGACCTGATGTGCCACTGGCTCGGCCGTGCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497591.5
CDS TCA 72 bp AATCTCTCCTGTGTTCCCCATAACACCGTCATTGTGTaGTGGTCTCTTCTTCCACCTTCCATTAGATGTTCG +
Preference number: 6 (lower is better)
Translates to: NLSCVPHNTVIV*WSLLPPSIRCS
Trigger: CGAACATCTAATGGAAGGTGGAAGAAGAGACCATCACACAATGACGGTGTTATGGGGAACACAGGAGAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549220.5
CDS CAA 72 bp GTTCCAATCTCTCCTGTGTTCCCCATAACACCGTCATaGTGTGATGGTCTCTTCTTCCACCTTCCATTAGAT +
Preference number: 6 (lower is better)
Translates to: VPISPVFPITPS*CDGLFFHLPLD
Trigger: ATCTAATGGAAGGTGGAAGAAGAGACCATCACACAATGACGGTGTTATGGGGAACACAGGAGAGATTGGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549220.5
CDS CAA 90 bp ACAGCTCCCCACCTTAGCTTACCTGTCTCTTCTTCAGTCATATACTaGATCAGCTCGTCCTTAGTAAGAAACCCACGTTTAGCTGAATCT +
Preference number: 6 (lower is better)
Translates to: TAPHLSLPVSSSVIY*ISSSLVRNPRLAES
Trigger: AGATTCAGCTAAACGTGGGTTTCTTACTAAGGACGAGCTGATCAAGTATATGACTGAAGAAGAGACAGGTAAGCTAAGGTGGGGAGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425550.5
CDS TCA 72 bp ATTATCTCCTGTGTTCCCCATAACACCGTCATTGTGTaGTGGTCTCTTCTTCCACCTTCCATTAGATGTTCG +
Preference number: 6 (lower is better)
Translates to: IISCVPHNTVIV*WSLLPPSIRCS
Trigger: CGAACATCTAATGGAAGGTGGAAGAAGAGACCATCACACAATGACGGTGTTATGGGGAACACAGGAGATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366521.7
ENST00000366522.6
ENST00000479260.1
CDS TCA 72 bp TTCTGTGCAAGAGGGTGTCTCCTCGGAGACAGAATATaGTGTCATCACTTGATCATCAAGAGATTAGGGTTC +
Preference number: 6 (lower is better)
Translates to: FCARGCLLGDRI*CHHLIIKRLGF
Trigger: GAACCCTAATCTCTTGATGATCAAGTGATGACATCATATTCTGTCTCCGAGGAGACACCCTCTTGCACAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000497591.5
CDS CAA 72 bp GGGGTGATAACGACACCACCTTCTTCAGTCATATACTaGATCAGCTCGTCCTTAGTAAGAAACCCACGTTTA +
Preference number: 6 (lower is better)
Translates to: GVITTPPSSVIY*ISSSLVRNPRL
Trigger: TAAACGTGGGTTTCTTACTAAGGACGAGCTGATCAAGTATATGACTGAAGAAGGTGGTGTCGTTATCACCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427529.1
CDS CAA 90 bp TCTAGAATGGGGGTGATAACGACACCACCTTCTTCAGTCATATACTaGATCAGCTCGTCCTTAGTAAGAAACCCACGTTTAGCTGAATCT +
Preference number: 6 (lower is better)
Translates to: SRMGVITTPPSSVIY*ISSSLVRNPRLAES
Trigger: AGATTCAGCTAAACGTGGGTTTCTTACTAAGGACGAGCTGATCAAGTATATGACTGAAGAAGGTGGTGTCGTTATCACCCCCATTCTAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427529.1
CDS CAA 90 bp CTGATAATTGTTCCAATCTCTCCTGTGTTCCCCATAACACCGTCATaGTGTGATGGTCTCTTCTTCCACCTTCCATTAGATGTTCGATCA +
Preference number: 6 (lower is better)
Translates to: LIIVPISPVFPITPS*CDGLFFHLPLDVRS
Trigger: TGATCGAACATCTAATGGAAGGTGGAAGAAGAGACCATCACACAATGACGGTGTTATGGGGAACACAGGAGAGATTGGAACAATTATCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000549220.5
CDS GCA 72 bp CACAAAGCCAACTCTATGAGACTAAACAGAGAGGATTaGCTTGAGACAAGATGTGAAGTTGAACATCAGTCC +
Preference number: 6 (lower is better)
Translates to: HKANSMRLNRED*LETRCEVEHQS
Trigger: GGACTGATGTTCAACTTCACATCTTGTCTCAAGGCAATCCTCTCTGTTTAGTCTCATAGAGTTGGCTTTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000391837.7
ENST00000497591.5
CDS CAA 72 bp CTACTATTATCTCCTGTGTTCCCCATAACACCGTCATaGTGTGATGGTCTCTTCTTCCACCTTCCATTAGAT +
Preference number: 6 (lower is better)
Translates to: LLLSPVFPITPS*CDGLFFHLPLD
Trigger: ATCTAATGGAAGGTGGAAGAAGAGACCATCACACAATGACGGTGTTATGGGGAACACAGGAGATAATAGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366521.7
ENST00000366522.6
ENST00000479260.1
CDS CAA 72 bp CTTCTGTGCAAGAGGGTGTCTTCTTCAGTCATATACTaGATCAGCTCGTCCTTAGTAAGAAACCCACGTTTA +
Preference number: 6 (lower is better)
Translates to: LLCKRVSSSVIY*ISSSLVRNPRL
Trigger: TAAACGTGGGTTTCTTACTAAGGACGAGCTGATCAAGTATATGACTGAAGAAGACACCCTCTTGCACAGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000391837.7
CDS CAA 90 bp GAAATTCTGCTACTATTATCTCCTGTGTTCCCCATAACACCGTCATaGTGTGATGGTCTCTTCTTCCACCTTCCATTAGATGTTCGATCA +
Preference number: 6 (lower is better)
Translates to: EILLLLSPVFPITPS*CDGLFFHLPLDVRS
Trigger: TGATCGAACATCTAATGGAAGGTGGAAGAAGAGACCATCACACAATGACGGTGTTATGGGGAACACAGGAGATAATAGTAGCAGAATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000366521.7
ENST00000366522.6
ENST00000479260.1
CDS CAA 72 bp CACCTTAGCTTACCTGTCTCTTCTTCAGTCATATACTaGATCAGCTCGTCCTTAGTAAGAAACCCACGTTTA +
Preference number: 6 (lower is better)
Translates to: HLSLPVSSSVIY*ISSSLVRNPRL
Trigger: TAAACGTGGGTTTCTTACTAAGGACGAGCTGATCAAGTATATGACTGAAGAAGAGACAGGTAAGCTAAGGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425550.5
CDS CAA 72 bp GCCAGTGGCACATCAGGTCTCTATTTGGATTTTACCTaGGGAAAATCTCAGGTTATCCTTCTTCAGTCATAT +
Preference number: 6 (lower is better)
Translates to: ASGTSGLYLDFT*GKSQVILLQSY
Trigger: ATATGACTGAAGAAGGATAACCTGAGATTTTCCCAAGGTAAAATCCAAATAGAGACCTGATGTGCCACTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497591.5
CDS CCA 72 bp CCAGTGGCACATCAGGTCTCTATTTGGATTTTACCTTaGGAAAATCTCAGGTTATCCTTCTTCAGTCATATA +
Preference number: 6 (lower is better)
Translates to: PVAHQVSIWILP*ENLRLSFFSHI
Trigger: TATATGACTGAAGAAGGATAACCTGAGATTTTCCCAAGGTAAAATCCAAATAGAGACCTGATGTGCCACTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000497591.5
CDS CAA 72 bp GGGAAAATCTCAGGTTATCCTTCTTCAGTCATATACTaGATCAGCTCGTCCTTAGTAAGAAACCCACGTTTA +
Preference number: 6 (lower is better)
Translates to: GKISGYPSSVIY*ISSSLVRNPRL
Trigger: TAAACGTGGGTTTCTTACTAAGGACGAGCTGATCAAGTATATGACTGAAGAAGGATAACCTGAGATTTTCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000497591.5