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Pregenerated sensors for EFCAB13-DT (Homo sapiens)

Ensembl gene IDs: ENSG00000263293

Ensembl transcript IDs: ENST00000575039.1, ENST00000576345.2

Found 9 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS TCA 90 bp TGTAGGGATAGGTTTGAGGCACTAAGGCAAGGCTGCCCTGAACACTaGAAGTACAGTGCCTTCTGGGAGCAGGAGGAATCCATCCCATCA +
Preference number: 5 (lower is better)
Translates to: CRDRFEALRQGCPEH*KYSAFWEQEESIPS
Trigger: TGATGGGATGGATTCCTCCTGCTCCCAGAAGGCACTGTACTTTCAGTGTTCAGGGCAGCCTTGCCTTAGTGCCTCAAACCTATCCCTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575039.1
ENST00000576345.2
CDS GCA 90 bp ACAGACCAGCCACAGGTTTGTCACCAACCAATGCTGTCGATCGCTTaGTTCCCTTTAACACCTTCATGGCCTTTGTTCTCCCCTTCTAAG +
Preference number: 5 (lower is better)
Translates to: TDQPQVCHQPMLSIA*FPLTPSWPLFSPSK
Trigger: CTTAGAAGGGGAGAACAAAGGCCATGAAGGTGTTAAAGGGAAGCAAGCGATCGACAGCATTGGTTGGTGACAAACCTGTGGCTGGTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000575039.1
CDS TCA 72 bp AGGTTTGAGGCACTAAGGCAAGGCTGCCCTGAACACTaGAAGTACAGTGCCTTCTGGGAGCAGGAGGAATCC +
Preference number: 6 (lower is better)
Translates to: RFEALRQGCPEH*KYSAFWEQEES
Trigger: GGATTCCTCCTGCTCCCAGAAGGCACTGTACTTTCAGTGTTCAGGGCAGCCTTGCCTTAGTGCCTCAAACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575039.1
ENST00000576345.2
CDS CAA 90 bp GGAGCAGGAGGAATCCATCCCATCATACACAGACCAGCCACAGGTTaGTCACCAACCAATGCTGTCGATCGCTTGCTTCCCTTTAACACC +
Preference number: 6 (lower is better)
Translates to: GAGGIHPIIHRPATG*SPTNAVDRLLPFNT
Trigger: GGTGTTAAAGGGAAGCAAGCGATCGACAGCATTGGTTGGTGACAAACCTGTGGCTGGTCTGTGTATGATGGGATGGATTCCTCCTGCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575039.1
ENST00000576345.2
CDS GCA 72 bp CCACAGGTTTGTCACCAACCAATGCTGTCGATCGCTTaGTTCCCTTTAACACCTTCATGGCCTTTGTTCTCC +
Preference number: 6 (lower is better)
Translates to: PQVCHQPMLSIA*FPLTPSWPLFS
Trigger: GGAGAACAAAGGCCATGAAGGTGTTAAAGGGAAGCAAGCGATCGACAGCATTGGTTGGTGACAAACCTGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575039.1
ENST00000576345.2
CDS CAA 72 bp GCCACAGGTTTGTCACCAACCAATGCTGTCGATCGCTaGCTTCCCTTTAACACCTTCATGGCCTTTGTTCTC +
Preference number: 6 (lower is better)
Translates to: ATGLSPTNAVDR*LPFNTFMAFVL
Trigger: GAGAACAAAGGCCATGAAGGTGTTAAAGGGAAGCAAGCGATCGACAGCATTGGTTGGTGACAAACCTGTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000575039.1
ENST00000576345.2
CDS CAA 72 bp TCGATCGCTTGCTTCCCTTTAACACCTTCATGGCCTTaGTTCTCCCCTTCTAAGGCCCCAAAGTCTTATCCC +
Preference number: 6 (lower is better)
Translates to: SIACFPLTPSWP*FSPSKAPKSYP
Trigger: GGGATAAGACTTTGGGGCCTTAGAAGGGGAGAACAAAGGCCATGAAGGTGTTAAAGGGAAGCAAGCGATCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575039.1
CDS CAA 90 bp CACAGACCAGCCACAGGTTTGTCACCAACCAATGCTGTCGATCGCTaGCTTCCCTTTAACACCTTCATGGCCTTTGTTCTCCTGACATTT +
Preference number: 6 (lower is better)
Translates to: HRPATGLSPTNAVDR*LPFNTFMAFVLLTF
Trigger: AAATGTCAGGAGAACAAAGGCCATGAAGGTGTTAAAGGGAAGCAAGCGATCGACAGCATTGGTTGGTGACAAACCTGTGGCTGGTCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576345.2
CDS TCA 72 bp CTTAAATACAGCTACTCAAGTACATGCTTTTCAATCTaGAGTTCGAAGGTAAGATTGAAGTGGGGTCAGACC +
Preference number: 6 (lower is better)
Translates to: LKYSYSSTCFSI*SSKVRLKWGQT
Trigger: GGTCTGACCCCACTTCAATCTTACCTTCGAACTTCAGATTGAAAAGCATGTACTTGAGTAGCTGTATTTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000575039.1