Pregenerated sensors for EFCAB13 (Homo sapiens)
Ensembl gene IDs: ENSG00000178852Ensembl transcript IDs: ENST00000331493.7, ENST00000517310.5, ENST00000517484.5, ENST00000518170.1, ENST00000518646.5, ENST00000519772.5, ENST00000520776.5, ENST00000520802.5, ENST00000522326.1, ENST00000523285.5, ENST00000523842.1, ENST00000523978.1
Found 93 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAGGGCCTCCAGGACCCTGTTTTACTCTATGGATGGCATTCTGATTaGCCACTGTGCATGTCAGTCAGTTCACAAAATAATCTCACCTCC | + |
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Preference number: 1 (lower is better) Translates to: KGLQDPVLLYGWHSD*PLCMSVSSQNNLTS Trigger: GGAGGTGAGATTATTTTGTGAACTGACTGACATGCACAGTGGTCAATCAGAATGCCATCCATAGAGTAAAACAGGGTCCTGGAGGCCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000517484.5 |
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| 3UTR-3UTR CCA 90 bp | TGCCCTGAGCCACCACTATGTGCAACACCCCCTGGTATCCCTGGATATCATCATCATGAAGCTCAGGGTTaGCACACCTGTAGGGGCAGT | + |
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Preference number: 2 (lower is better) Translates to: CPEPPLCATPPGIPGYHHHEAQG*HTCRGS Trigger: ACTGCCCCTACAGGTGTGCCAACCCTGAGCTTCATG...ATGATGATATCCAGGGATACCAGGGGGTGTTGCACATAGTGGTGGCTCAGGGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000517484.5 |
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| 3UTR-3UTR CCA 90 bp | ATCTGCTGCCCTGAGCCACCACTATGTGCAACACCCCCTGGTATCCCTGGATATACTTCCCCATTTGTTTaGCCCCATGAAGCTCAGGGT | + |
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Preference number: 2 (lower is better) Translates to: ICCPEPPLCATPPGIPGYTSPFV*PHEAQG Trigger: ACCCTGAGCTTCATGGGGCCAAACAAATGGGGAAGT...ATATCCAGGGATACCAGGGGGTGTTGCACATAGTGGTGGCTCAGGGCAGCAGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000517484.5 |
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| 3UTR-3UTR CCA 90 bp | ACTCTTGGCCCACATGGCTTCACCTATGAATTCTACTCAACATTCAAGGAAGAACCTAGGTACTGTCAGTaGACTCACACAGGGATAAGA | + |
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Preference number: 2 (lower is better) Translates to: TLGPHGFTYEFYSTFKEEPRYCQ*THTGIR Trigger: TCTTATCCCTGTGTGAGTCCACTGACAGTACCTAGG...TTCTTCCTTGAATGTTGAGTAGAATTCATAGGTGAAGCCATGTGGGCCAAGAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517484.5 |
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| 3UTR TCA 72 bp | CAGGACCCTGTTTTACTCTATGGATGGCATTCTGATTaGCCACTGTGCATGTCAGTCAGTTCACAAAATAAT | + |
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Preference number: 3 (lower is better) Translates to: QDPVLLYGWHSD*PLCMSVSSQNN Trigger: ATTATTTTGTGAACTGACTGACATGCACAGTGGTCAATCAGAATGCCATCCATAGAGTAAAACAGGGTCCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000517484.5 |
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| CDS-3UTR GCA 90 bp | ATATCTGCTGCCCTGAGCCACCACTATGTGCAACACCCCCTGGTATCCCTGGATGACTTCGGCCCGAGCTaGCCTCCCTTCCTCTCGGCT | + |
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Preference number: 4 (lower is better) Translates to: ISAALSHHYVQHPLVSLDDFGPS*PPFLSA Trigger: AGCCGAGAGGAAGGGAGGGCAGCTCGGGCCGAAGTC...ATCCAGGGATACCAGGGGGTGTTGCACATAGTGGTGGCTCAGGGCAGCAGATAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000517484.5 |
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| CDS-3UTR CCA 90 bp | ATCTGCTGCCCTGAGCCACCACTATGTGCAACACCCCCTGGTATCCCTGGATATCATGAAGCTCAGGGTTaGCACACCTGTAGGGGCAGT | + |
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Preference number: 4 (lower is better) Translates to: ICCPEPPLCATPPGIPGYHEAQG*HTCRGS Trigger: ACTGCCCCTACAGGTGTGCCAACCCTGAGCTTCATG...ATATCCAGGGATACCAGGGGGTGTTGCACATAGTGGTGGCTCAGGGCAGCAGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000517484.5 |
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| CDS-3UTR GCA 90 bp | ATATCTGCTGCCCTGAGCCACCACTATGTGCAACACCCCCTGGTATCCCTGGATGCTTCCCATAGACCCTaGTCTTACGAAGCCAACGAC | + |
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Preference number: 4 (lower is better) Translates to: ISAALSHHYVQHPLVSLDASHRP*SYEAND Trigger: GTCGTTGGCTTCGTAAGAGCAGGGTCTATGGGAAGC...ATCCAGGGATACCAGGGGGTGTTGCACATAGTGGTGGCTCAGGGCAGCAGATAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000517484.5 |
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| CDS-3UTR GCA 90 bp | ATATCTGCTGCCCTGAGCCACCACTATGTGCAACACCCCCTGGTATCCCTGGATGGACTCCTACATTACTaGTGCCAACCCCACCCAGAA | + |
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Preference number: 4 (lower is better) Translates to: ISAALSHHYVQHPLVSLDGLLHY*CQPHPE Trigger: TTCTGGGTGGGGTTGGCAGCAGTAATGTAGGAGTCC...ATCCAGGGATACCAGGGGGTGTTGCACATAGTGGTGGCTCAGGGCAGCAGATAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000517484.5 |
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| CDS-3UTR TCA 90 bp | GCTGCCCTGAGCCACCACTATGTGCAACACCCCCTGGTATCCCTGGATATCATCCTATGGATGGCATTCTaGTTGACCACTGTGCATGTC | + |
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Preference number: 4 (lower is better) Translates to: AALSHHYVQHPLVSLDIILWMAF*LTTVHV Trigger: GACATGCACAGTGGTCAATCAGAATGCCATCCATAG...GATGATATCCAGGGATACCAGGGGGTGTTGCACATAGTGGTGGCTCAGGGCAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000517484.5 |
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| CDS-3UTR CCA 90 bp | GCTGCCCTGAGCCACCACTATGTGCAACACCCCCTGGTATCCCTGGATATCATCCCTAGGTACTGTCAGTaGACTCACACAGGGATAAGA | + |
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Preference number: 4 (lower is better) Translates to: AALSHHYVQHPLVSLDIIPRYCQ*THTGIR Trigger: TCTTATCCCTGTGTGAGTCCACTGACAGTACCTAGG...GATGATATCCAGGGATACCAGGGGGTGTTGCACATAGTGGTGGCTCAGGGCAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000517484.5 |
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| CDS-3UTR TCA 90 bp | TGCCCTGAGCCACCACTATGTGCAACACCCCCTGGTATCCCTGGATATCATCATAAATATCTGCTGCCCTaGGCCACCACTATGTGCAAC | + |
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Preference number: 4 (lower is better) Translates to: CPEPPLCATPPGIPGYHHKYLLP*ATTMCN Trigger: GTTGCACATAGTGGTGGCTCAGGGCAGCAGATATTT...ATGATGATATCCAGGGATACCAGGGGGTGTTGCACATAGTGGTGGCTCAGGGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000517484.5 |
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| CDS-3UTR GCA 90 bp | ATCTGCTGCCCTGAGCCACCACTATGTGCAACACCCCCTGGTATCCCTGGATATCACCAGGCAACGCATTaGATTCAGGAAAACTTCGCT | + |
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Preference number: 4 (lower is better) Translates to: ICCPEPPLCATPPGIPGYHQATH*IQENFA Trigger: AGCGAAGTTTTCCTGAATGCAATGCGTTGCCTGGTG...ATATCCAGGGATACCAGGGGGTGTTGCACATAGTGGTGGCTCAGGGCAGCAGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000517484.5 |
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| CDS-3UTR TCA 90 bp | GCTGCCCTGAGCCACCACTATGTGCAACACCCCCTGGTATCCCTGGATATCATCCTTACAGCTGGCTTCTaGAGTTTTGGGATACTAGAA | + |
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Preference number: 4 (lower is better) Translates to: AALSHHYVQHPLVSLDIILTAGF*SFGILE Trigger: TTCTAGTATCCCAAAACTTCAGAAGCCAGCTGTAAG...GATGATATCCAGGGATACCAGGGGGTGTTGCACATAGTGGTGGCTCAGGGCAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000517484.5 |
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| CDS-3UTR GCA 90 bp | TGCCCTGAGCCACCACTATGTGCAACACCCCCTGGTATCCCTGGATATCATCATTGGCAGGTCTTAATTTaGTGGATGAATCAGGTACCG | + |
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Preference number: 4 (lower is better) Translates to: CPEPPLCATPPGIPGYHHWQVLI*WMNQVP Trigger: CGGTACCTGATTCATCCAGCAAATTAAGACCTGCCA...ATGATGATATCCAGGGATACCAGGGGGTGTTGCACATAGTGGTGGCTCAGGGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000517484.5 |
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| CDS-3UTR GCA 90 bp | GCTGCCCTGAGCCACCACTATGTGCAACACCCCCTGGTATCCCTGGATATCATCCAGGTATACCAATCTTaGCATTATCGACATGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: AALSHHYVQHPLVSLDIIQVYQS*HYRHVT Trigger: TGTCACATGTCGATAATGGCAAGATTGGTATACCTG...GATGATATCCAGGGATACCAGGGGGTGTTGCACATAGTGGTGGCTCAGGGCAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000517484.5 |
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| CDS-3UTR CCA 90 bp | ATCTGCTGCCCTGAGCCACCACTATGTGCAACACCCCCTGGTATCCCTGGATATGAAAACTTCGCTCCTTaGCGAGAGCATTTACAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: ICCPEPPLCATPPGIPGYENFAP*REHLQS Trigger: ACTTTGTAAATGCTCTCGCCAAGGAGCGAAGTTTTC...ATATCCAGGGATACCAGGGGGTGTTGCACATAGTGGTGGCTCAGGGCAGCAGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000517484.5 |
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| CDS-3UTR TCA 90 bp | GCTGCCCTGAGCCACCACTATGTGCAACACCCCCTGGTATCCCTGGATATCATCTTAGACTTTGAGTCATaGATTTCACCCTTCTCTGAA | + |
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Preference number: 4 (lower is better) Translates to: AALSHHYVQHPLVSLDIILDFES*ISPFSE Trigger: TTCAGAGAAGGGTGAAATTCATGACTCAAAGTCTAA...GATGATATCCAGGGATACCAGGGGGTGTTGCACATAGTGGTGGCTCAGGGCAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000517484.5 |
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| CDS-3UTR TCA 90 bp | ATATCTGCTGCCCTGAGCCACCACTATGTGCAACACCCCCTGGTATCCCTGGATCCATCAATAATGTCTTaGGGTCAGAGACATCAACTA | + |
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Preference number: 4 (lower is better) Translates to: ISAALSHHYVQHPLVSLDPSIMS*GQRHQL Trigger: TAGTTGATGTCTCTGACCTCAAGACATTATTGATGG...ATCCAGGGATACCAGGGGGTGTTGCACATAGTGGTGGCTCAGGGCAGCAGATAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000517484.5 |
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| CDS-3UTR TCA 90 bp | ATATCTGCTGCCCTGAGCCACCACTATGTGCAACACCCCCTGGTATCCCTGGATATAGCATTAGCTGTATaGAGGTCCTTGTCCATCAAT | + |
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Preference number: 4 (lower is better) Translates to: ISAALSHHYVQHPLVSLDIALAV*RSLSIN Trigger: ATTGATGGACAAGGACCTTCATACAGCTAATGCTAT...ATCCAGGGATACCAGGGGGTGTTGCACATAGTGGTGGCTCAGGGCAGCAGATAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000517484.5 |
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| CDS-3UTR TCA 90 bp | ATATCTGCTGCCCTGAGCCACCACTATGTGCAACACCCCCTGGTATCCCTGGATACTCCTAATTTCCGGTaGAATTTCCTTCTCTATTGT | + |
|
Preference number: 4 (lower is better) Translates to: ISAALSHHYVQHPLVSLDTPNFR*NFLLYC Trigger: ACAATAGAGAAGGAAATTTCACCGGAAATTAGGAGT...ATCCAGGGATACCAGGGGGTGTTGCACATAGTGGTGGCTCAGGGCAGCAGATAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000517484.5 |
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| CDS-3UTR TCA 90 bp | ATATCTGCTGCCCTGAGCCACCACTATGTGCAACACCCCCTGGTATCCCTGGATTACCTCTTCTTTAGGTaGCTTAATCCCAACATTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ISAALSHHYVQHPLVSLDYLFFR*LNPNIS Trigger: AGAAATGTTGGGATTAAGTCACCTAAAGAAGAGGTA...ATCCAGGGATACCAGGGGGTGTTGCACATAGTGGTGGCTCAGGGCAGCAGATAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000517484.5 |
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| CDS-3UTR GCA 90 bp | ATCTGCTGCCCTGAGCCACCACTATGTGCAACACCCCCTGGTATCCCTGGATATACTGATTCGGCAACTTaGATAAAGAGTTTTCTTTCC | + |
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Preference number: 4 (lower is better) Translates to: ICCPEPPLCATPPGIPGYTDSAT*IKSFLS Trigger: GGAAAGAAAACTCTTTATGCAAGTTGCCGAATCAGT...ATATCCAGGGATACCAGGGGGTGTTGCACATAGTGGTGGCTCAGGGCAGCAGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000517484.5 |
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| CDS-3UTR CCA 90 bp | TGCCCTGAGCCACCACTATGTGCAACACCCCCTGGTATCCCTGGATATCATCATATGCTTTCTTACAGCTaGCTTCTGAAGTTTTGGGAT | + |
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Preference number: 4 (lower is better) Translates to: CPEPPLCATPPGIPGYHHMLSYS*LLKFWD Trigger: ATCCCAAAACTTCAGAAGCCAGCTGTAAGAAAGCAT...ATGATGATATCCAGGGATACCAGGGGGTGTTGCACATAGTGGTGGCTCAGGGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000517484.5 |
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| CDS-3UTR GCA 90 bp | ATCTGCTGCCCTGAGCCACCACTATGTGCAACACCCCCTGGTATCCCTGGATATCTGAAGTTCTTCTGCTaGAATGTAATTTTCTTGAAG | + |
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Preference number: 4 (lower is better) Translates to: ICCPEPPLCATPPGIPGYLKFFC*NVIFLK Trigger: CTTCAAGAAAATTACATTGCAGCAGAAGAACTTCAG...ATATCCAGGGATACCAGGGGGTGTTGCACATAGTGGTGGCTCAGGGCAGCAGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000517484.5 |
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| CDS-3UTR CCA 90 bp | TGCCCTGAGCCACCACTATGTGCAACACCCCCTGGTATCCCTGGATATCATCATTCAACTAGATCATTCTaGAGAATTTGGGTAGTAGCT | + |
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Preference number: 4 (lower is better) Translates to: CPEPPLCATPPGIPGYHHSTRSF*RIWVVA Trigger: AGCTACTACCCAAATTCTCCAGAATGATCTAGTTGA...ATGATGATATCCAGGGATACCAGGGGGTGTTGCACATAGTGGTGGCTCAGGGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000517484.5 |
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| CDS-3UTR CCA 90 bp | AGCCACCACTATGTGCAACACCCCCTGGTATCCCTGGATATCATCATAATTTACATGTGCAACACCCCCTaGTATCCCTGGATATCATCA | + |
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Preference number: 4 (lower is better) Translates to: SHHYVQHPLVSLDIIIIYMCNTP*YPWISS Trigger: TGATGATATCCAGGGATACCAGGGGGTGTTGCACAT...GTAAATTATGATGATATCCAGGGATACCAGGGGGTGTTGCACATAGTGGTGGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000517484.5 |
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| CDS-3UTR TCA 90 bp | CAGTCAGTTCACAAAATAATCTCACCTCCTAGGTACTGTCAGTGGACTCACACATCATCGTCTCCTTTCTaGGATCGTCGAGGGTTTCAA | + |
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Preference number: 4 (lower is better) Translates to: QSVHKIISPPRYCQWTHTSSSPF*DRRGFQ Trigger: TTGAAACCCTCGACGATCTCAGAAAGGAGACGATGA...TGTGTGAGTCCACTGACAGTACCTAGGAGGTGAGATTATTTTGTGAACTGACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517484.5 |
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| CDS-3UTR CCA 90 bp | ACTCTTGGCCCACATGGCTTCACCTATGAATTCTACTCAACATTCAAGGAAGAAACTTCCCCATTTGTTTaGCCCCATGAAGCTCAGGGT | + |
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Preference number: 4 (lower is better) Translates to: TLGPHGFTYEFYSTFKEETSPFV*PHEAQG Trigger: ACCCTGAGCTTCATGGGGCCAAACAAATGGGGAAGT...TTCTTCCTTGAATGTTGAGTAGAATTCATAGGTGAAGCCATGTGGGCCAAGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000517484.5 |
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| CDS-3UTR TCA 90 bp | AGCCACCACTATGTGCAACACCCCCTGGTATCCCTGGATATCATCATAATTTACTATCCAGAGACTTACTaGGGCTTGTACTACTCTTCA | + |
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Preference number: 4 (lower is better) Translates to: SHHYVQHPLVSLDIIIIYYPETY*GLYYSS Trigger: TGAAGAGTAGTACAAGCCTCAGTAAGTCTCTGGATA...GTAAATTATGATGATATCCAGGGATACCAGGGGGTGTTGCACATAGTGGTGGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000517484.5 |
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| CDS-3UTR TCA 90 bp | AGCCACCACTATGTGCAACACCCCCTGGTATCCCTGGATATCATCATAATTTACGAAGGCAAAATAGACTaGAGTTCTTCTGCTGCAATG | + |
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Preference number: 4 (lower is better) Translates to: SHHYVQHPLVSLDIIIIYEGKID*SSSAAM Trigger: CATTGCAGCAGAAGAACTTCAGTCTATTTTGCCTTC...GTAAATTATGATGATATCCAGGGATACCAGGGGGTGTTGCACATAGTGGTGGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000517484.5 |
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| CDS-3UTR CCA 90 bp | AGCCACCACTATGTGCAACACCCCCTGGTATCCCTGGATATCATCATAATTTACCAGGTCTTAATTTGCTaGATGAATCAGGTACCGCAT | + |
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Preference number: 4 (lower is better) Translates to: SHHYVQHPLVSLDIIIIYQVLIC*MNQVPH Trigger: ATGCGGTACCTGATTCATCCAGCAAATTAAGACCTG...GTAAATTATGATGATATCCAGGGATACCAGGGGGTGTTGCACATAGTGGTGGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000517484.5 |
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| CDS-3UTR TCA 90 bp | CAACACCCCCTGGTATCCCTGGATATCATCATAATTTACCTTCCAAAAACCAAATGTCACCTTCTCCTTTaGCAGCTTCAGAAAAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: QHPLVSLDIIIIYLPKTKCHLLL*QLQKRR Trigger: CCTCCTTTTCTGAAGCTGTCAAAGGAGAAGGTGACA...TTTGGTTTTTGGAAGGTAAATTATGATGATATCCAGGGATACCAGGGGGTGTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000517484.5 |
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| CDS-3UTR GCA 90 bp | AGCCACCACTATGTGCAACACCCCCTGGTATCCCTGGATATCATCATAATTTACCTTTTCCCGAGTAATTaGAGAAGATGTACAAAGAGG | + |
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Preference number: 4 (lower is better) Translates to: SHHYVQHPLVSLDIIIIYLFPSN*RRCTKR Trigger: CCTCTTTGTACATCTTCTGCAATTACTCGGGAAAAG...GTAAATTATGATGATATCCAGGGATACCAGGGGGTGTTGCACATAGTGGTGGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000517484.5 |
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| CDS-3UTR GCA 90 bp | AGCCACCACTATGTGCAACACCCCCTGGTATCCCTGGATATCATCATAATTTACTTTATAAATATCTGCTaGCCTGAGCCACCACTATGT | + |
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Preference number: 4 (lower is better) Translates to: SHHYVQHPLVSLDIIIIYFINIC*PEPPLC Trigger: ACATAGTGGTGGCTCAGGGCAGCAGATATTTATAAA...GTAAATTATGATGATATCCAGGGATACCAGGGGGTGTTGCACATAGTGGTGGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000517484.5 |
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| CDS-3UTR CCA 90 bp | ACTCTTGGCCCACATGGCTTCACCTATGAATTCTACTCAACATTCAAGGAAGAAGTAACTCTTCTAACCTaGCAGCATCACGCATATTCC | + |
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Preference number: 4 (lower is better) Translates to: TLGPHGFTYEFYSTFKEEVTLLT*QHHAYS Trigger: GGAATATGCGTGATGCTGCCAGGTTAGAAGAGTTAC...TTCTTCCTTGAATGTTGAGTAGAATTCATAGGTGAAGCCATGTGGGCCAAGAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000517484.5 |
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| CDS-3UTR GCA 90 bp | AGCCACCACTATGTGCAACACCCCCTGGTATCCCTGGATATCATCATAATTTACAAACATTTCAAGGCATaGTCCAAATCAGGTATACCA | + |
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Preference number: 4 (lower is better) Translates to: SHHYVQHPLVSLDIIIIYKHFKA*SKSGIP Trigger: TGGTATACCTGATTTGGAGCATGCCTTGAAATGTTT...GTAAATTATGATGATATCCAGGGATACCAGGGGGTGTTGCACATAGTGGTGGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000517484.5 |
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| CDS-3UTR CCA 90 bp | AGCCACCACTATGTGCAACACCCCCTGGTATCCCTGGATATCATCATAATTTACTTTGAATATGGTTCTTaGACTCCTACATTACTGCTG | + |
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Preference number: 4 (lower is better) Translates to: SHHYVQHPLVSLDIIIIYFEYGS*TPTLLL Trigger: CAGCAGTAATGTAGGAGTCCAAGAACCATATTCAAA...GTAAATTATGATGATATCCAGGGATACCAGGGGGTGTTGCACATAGTGGTGGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000517484.5 |
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| CDS-3UTR CCA 90 bp | CAGTCAGTTCACAAAATAATCTCACCTCCTAGGTACTGTCAGTGGACTCACACAGACGAAACCTGTTTTTaGAGACTGGAATGCTTTCTT | + |
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Preference number: 4 (lower is better) Translates to: QSVHKIISPPRYCQWTHTDETCF*RLECFL Trigger: AAGAAAGCATTCCAGTCTCCAAAAACAGGTTTCGTC...TGTGTGAGTCCACTGACAGTACCTAGGAGGTGAGATTATTTTGTGAACTGACTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000517484.5 |
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| CDS-3UTR GCA 90 bp | AGCCACCACTATGTGCAACACCCCCTGGTATCCCTGGATATCATCATAATTTACTCAGTTCTTTTACTGTaGTGTTGTACTTGTAAACTC | + |
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Preference number: 4 (lower is better) Translates to: SHHYVQHPLVSLDIIIIYSVLLL*CCTCKL Trigger: GAGTTTACAAGTACAACAGCACAGTAAAAGAACTGA...GTAAATTATGATGATATCCAGGGATACCAGGGGGTGTTGCACATAGTGGTGGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000517484.5 |
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| CDS-3UTR CCA 90 bp | CAACACCCCCTGGTATCCCTGGATATCATCATAATTTACCTTCCAAAAACCAAACCAATATCCACCATGTaGTTACCACTTAATTCTTTT | + |
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Preference number: 4 (lower is better) Translates to: QHPLVSLDIIIIYLPKTKPISTM*LPLNSF Trigger: AAAAGAATTAAGTGGTAACCACATGGTGGATATTGG...TTTGGTTTTTGGAAGGTAAATTATGATGATATCCAGGGATACCAGGGGGTGTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000517484.5 |
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| CDS GCA 90 bp | GGCCAGCCGCCGGGCGCTGCATTCGAGCGGTGGGGCTCCTGTCCGTaGGCTTTCCTCCCGCAGCCCCGGCCGGGATTCCGCCCTCCGTCC | + |
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Preference number: 5 (lower is better) Translates to: GQPPGAAFERWGSCP*AFLPQPRPGFRPPS Trigger: GGACGGAGGGCGGAATCCCGGCCGGGGCTGCGGGAGGAAAGCGCACGGACAGGAGCCCCACCGCTCGAATGCAGCGCCCGGCGGCTGGCC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000523285.5 |
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| CDS CCA 90 bp | CCTGTGACCTCACGAGGCCAGCCGCCGGGCGCTGCATTCGAGCGGTaGGGCTCCTGTCCGTGCGCTTTCCTCCCGCAGCCCCGGCCGGGA | + |
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Preference number: 5 (lower is better) Translates to: PVTSRGQPPGAAFER*GSCPCAFLPQPRPG Trigger: TCCCGGCCGGGGCTGCGGGAGGAAAGCGCACGGACAGGAGCCCCACCGCTCGAATGCAGCGCCCGGCGGCTGGCCTCGTGAGGTCACAGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523285.5 |
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| CDS GCA 90 bp | CCACCTCTTCCAAGAACCCACGCTGAGGAGGCTTCCCATAGACCCTaGTCTTACGAAGCCAACGACTTCGGCCCGAGCTGCCCTCCCTTC | + |
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Preference number: 5 (lower is better) Translates to: PPLPRTHAEEASHRP*SYEANDFGPSCPPF Trigger: GAAGGGAGGGCAGCTCGGGCCGAAGTCGTTGGCTTCGTAAGAGCAGGGTCTATGGGAAGCCTCCTCAGCGTGGGTTCTTGGAAGAGGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000331493.7 ENST00000517484.5 ENST00000520802.5 |
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| CDS GCA 90 bp | CCACCTCTTCCAAGAACCCACGCTGAGGAGGCTTCCCATAGACCCTaGTCTTACGAAGCCAACGACTTCTCTGTCCCCCAAGGGTCCCAC | + |
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Preference number: 5 (lower is better) Translates to: PPLPRTHAEEASHRP*SYEANDFSVPQGSH Trigger: GTGGGACCCTTGGGGGACAGAGAAGTCGTTGGCTTCGTAAGAGCAGGGTCTATGGGAAGCCTCCTCAGCGTGGGTTCTTGGAAGAGGTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000519772.5 |
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| CDS-3UTR CAA 90 bp | ATCTGCTGCCCTGAGCCACCACTATGTGCAACACCCCCTGGTATCCCTGGATATACACCAGGCAACGCATaGCATTCAGGAAAACTTCGC | + |
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Preference number: 5 (lower is better) Translates to: ICCPEPPLCATPPGIPGYTPGNA*HSGKLR Trigger: GCGAAGTTTTCCTGAATGCAATGCGTTGCCTGGTGT...ATATCCAGGGATACCAGGGGGTGTTGCACATAGTGGTGGCTCAGGGCAGCAGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000517484.5 |
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| CDS-3UTR CAA 90 bp | GCTGCCCTGAGCCACCACTATGTGCAACACCCCCTGGTATCCCTGGATATCATCGAGATTATCAAAAAGTaGGCAGGTCTTAATTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: AALSHHYVQHPLVSLDIIEIIKK*AGLNLL Trigger: CAGCAAATTAAGACCTGCCAACTTTTTGATAATCTC...GATGATATCCAGGGATACCAGGGGGTGTTGCACATAGTGGTGGCTCAGGGCAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000517484.5 |
||
| CDS-3UTR CAA 90 bp | TGCCCTGAGCCACCACTATGTGCAACACCCCCTGGTATCCCTGGATATCATCATTCAGGTATACCAATCTaGCCATTATCGACATGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: CPEPPLCATPPGIPGYHHSGIPI*PLSTCD Trigger: GTCACATGTCGATAATGGCAAGATTGGTATACCTGA...ATGATGATATCCAGGGATACCAGGGGGTGTTGCACATAGTGGTGGCTCAGGGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000517484.5 |
||
| CDS GCA 90 bp | CCTCTGCCTGGTTCTTTCCAGCGTCTCTCTATAAAAGAAAACTTCTaGCCAACCCTTGAGACACCTACAGATCTTACGGTCACAGCATTC | + |
|
Preference number: 5 (lower is better) Translates to: PLPGSFQRLSIKENF*PTLETPTDLTVTAF Trigger: GAATGCTGTGACCGTAAGATCTGTAGGTGTCTCAAGGGTTGGGCAGAAGTTTTCTTTTATAGAGAGACGCTGGAAAGAACCAGGCAGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000517310.5 |
||
| CDS-3UTR CAA 90 bp | TGCCCTGAGCCACCACTATGTGCAACACCCCCTGGTATCCCTGGATATCATCATAGTTTATGCCATTCTTaGAATATGGTTCTTGGACTC | + |
|
Preference number: 5 (lower is better) Translates to: CPEPPLCATPPGIPGYHHSLCHS*NMVLGL Trigger: GAGTCCAAGAACCATATTCAAAGAATGGCATAAACT...ATGATGATATCCAGGGATACCAGGGGGTGTTGCACATAGTGGTGGCTCAGGGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000517484.5 |
||
| CDS-3UTR CAA 90 bp | AGCCACCACTATGTGCAACACCCCCTGGTATCCCTGGATATCATCATAATTTACTTGGCAGGTCTTAATTaGCTGGATGAATCAGGTACC | + |
|
Preference number: 5 (lower is better) Translates to: SHHYVQHPLVSLDIIIIYLAGLN*LDESGT Trigger: GGTACCTGATTCATCCAGCAAATTAAGACCTGCCAA...GTAAATTATGATGATATCCAGGGATACCAGGGGGTGTTGCACATAGTGGTGGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000517484.5 |
||
| CDS TCA 90 bp | CCTGCCCCTGCCCGCCTAAGACCATTTTACTTCTTGGATAATGCATaGTTGAGGATGTGTTCAGATGCAGTCACCTTGAATAATGTCATT | + |
|
Preference number: 5 (lower is better) Translates to: PAPARLRPFYFLDNA*LRMCSDAVTLNNVI Trigger: AATGACATTATTCAAGGTGACTGCATCTGAACACATCCTCAATCATGCATTATCCAAGAAGTAAAATGGTCTTAGGCGGGCAGGGGCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000523978.1 |
||
| CDS-3UTR CAA 90 bp | ACTCTTGGCCCACATGGCTTCACCTATGAATTCTACTCAACATTCAAGGAAGAAGGAAAACTTCGCTCCTaGGCGAGAGCATTTACAAAG | + |
|
Preference number: 5 (lower is better) Translates to: TLGPHGFTYEFYSTFKEEGKLRS*ARAFTK Trigger: CTTTGTAAATGCTCTCGCCAAGGAGCGAAGTTTTCC...TTCTTCCTTGAATGTTGAGTAGAATTCATAGGTGAAGCCATGTGGGCCAAGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517484.5 |
||
| CDS-3UTR CAA 90 bp | CAGTCAGTTCACAAAATAATCTCACCTCCTAGGTACTGTCAGTGGACTCACACAGAGAAGCATTCCGTGTaGCTCATCATAGTATCAATG | + |
|
Preference number: 5 (lower is better) Translates to: QSVHKIISPPRYCQWTHTEKHSV*LIIVSM Trigger: CATTGATACTATGATGAGCAACACGGAATGCTTCTC...TGTGTGAGTCCACTGACAGTACCTAGGAGGTGAGATTATTTTGTGAACTGACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517484.5 |
||
| CDS-3UTR CAA 90 bp | ACTCTTGGCCCACATGGCTTCACCTATGAATTCTACTCAACATTCAAGGAAGAAAGTATCTGTGTAGCCTaGGACTTTTGGAAATGTGGA | + |
|
Preference number: 5 (lower is better) Translates to: TLGPHGFTYEFYSTFKEESICVA*DFWKCG Trigger: TCCACATTTCCAAAAGTCCAAGGCTACACAGATACT...TTCTTCCTTGAATGTTGAGTAGAATTCATAGGTGAAGCCATGTGGGCCAAGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517484.5 |
||
| CDS-3UTR CAA 90 bp | CAGTCAGTTCACAAAATAATCTCACCTCCTAGGTACTGTCAGTGGACTCACACATCCATCAATAATGTCTaGAGGTCAGAGACATCAACT | + |
|
Preference number: 5 (lower is better) Translates to: QSVHKIISPPRYCQWTHTSINNV*RSETST Trigger: AGTTGATGTCTCTGACCTCAAGACATTATTGATGGA...TGTGTGAGTCCACTGACAGTACCTAGGAGGTGAGATTATTTTGTGAACTGACTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517484.5 |
||
| CDS CCA 90 bp | TCCATCAATAATGTCTTGAGGTCAGAGACATCAACTAGATCATTCTaGAGAATTTGGGTAGTAGCTAAGAGTATCTGTGTAGCCTTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: SINNVLRSETSTRSF*RIWVVAKSICVALD Trigger: GTCCAAGGCTACACAGATACTCTTAGCTACTACCCAAATTCTCCAGAATGATCTAGTTGATGTCTCTGACCTCAAGACATTATTGATGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000331493.7 ENST00000517484.5 |
||
| CDS CCA 90 bp | AATTTATTGACGAGATTATCAAAAAGTTGGCAGGTCTTAATTTGCTaGATGAATCAGGTACCGCATAAGCCTCTCCAAACTCGTAAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: NLLTRLSKSWQVLIC*MNQVPHKPLQTRKG Trigger: GCCCTTACGAGTTTGGAGAGGCTTATGCGGTACCTGATTCATCCAGCAAATTAAGACCTGCCAACTTTTTGATAATCTCGTCAATAAATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000523285.5 |
||
| CDS-3UTR CAA 90 bp | CAACACCCCCTGGTATCCCTGGATATCATCATAATTTACCTTCCAAAAACCAAAAGACGAAACCTGTTTTaGGAGACTGGAATGCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: QHPLVSLDIIIIYLPKTKRRNLF*ETGMLS Trigger: AGAAAGCATTCCAGTCTCCAAAAACAGGTTTCGTCT...TTTGGTTTTTGGAAGGTAAATTATGATGATATCCAGGGATACCAGGGGGTGTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000517484.5 |
||
| CDS-3UTR CAA 90 bp | CAACACCCCCTGGTATCCCTGGATATCATCATAATTTACCTTCCAAAAACCAAACAGTTAAGGGCTTCATaGAAGTCCTCCTCAGTTAAA | + |
|
Preference number: 5 (lower is better) Translates to: QHPLVSLDIIIIYLPKTKQLRAS*KSSSVK Trigger: TTTAACTGAGGAGGACTTCAATGAAGCCCTTAACTG...TTTGGTTTTTGGAAGGTAAATTATGATGATATCCAGGGATACCAGGGGGTGTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000517484.5 |
||
| CDS GCA 90 bp | TGTAATTTATTGACGAGATTATCAAAAAGTTGGCAGGTCTTAATTTaGTGGATGAATCAGGTACCGCATAAGCCTCTCCAAACTCCACCT | + |
|
Preference number: 5 (lower is better) Translates to: CNLLTRLSKSWQVLI*WMNQVPHKPLQTPP Trigger: AGGTGGAGTTTGGAGAGGCTTATGCGGTACCTGATTCATCCAGCAAATTAAGACCTGCCAACTTTTTGATAATCTCGTCAATAAATTACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000331493.7 ENST00000517310.5 ENST00000517484.5 ENST00000519772.5 ENST00000520802.5 |
||
| CDS CCA 90 bp | AATTTATTGACGAGATTATCAAAAAGTTGGCAGGTCTTAATTTGCTaGATGAATCAGGTACCGCATAAGCCTCTCCAAACTCCACCTCTT | + |
|
Preference number: 5 (lower is better) Translates to: NLLTRLSKSWQVLIC*MNQVPHKPLQTPPL Trigger: AAGAGGTGGAGTTTGGAGAGGCTTATGCGGTACCTGATTCATCCAGCAAATTAAGACCTGCCAACTTTTTGATAATCTCGTCAATAAATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENST00000331493.7 ENST00000517310.5 ENST00000517484.5 ENST00000519772.5 ENST00000520802.5 |
||
| CDS GCA 90 bp | TGTAATTTATTGACGAGATTATCAAAAAGTTGGCAGGTCTTAATTTaGTGGATGAATCAGGTACCGCATAAGCCTCTCCAAACTCGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: CNLLTRLSKSWQVLI*WMNQVPHKPLQTRK Trigger: CTTACGAGTTTGGAGAGGCTTATGCGGTACCTGATTCATCCAGCAAATTAAGACCTGCCAACTTTTTGATAATCTCGTCAATAAATTACA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000523285.5 |
||
| CDS TCA 90 bp | TCAGGTACATGTCTTAACATTACAGTAAGTATAGCATTAGCTGTATaGAGGTCCTTGTCCATCAATAATGTCTTGAGGTCAGAGACATCA | + |
|
Preference number: 5 (lower is better) Translates to: SGTCLNITVSIALAV*RSLSINNVLRSETS Trigger: TGATGTCTCTGACCTCAAGACATTATTGATGGACAAGGACCTTCATACAGCTAATGCTATACTTACTGTAATGTTAAGACATGTACCTGA 38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000331493.7 ENST00000517484.5 |
||
| CDS GCA 90 bp | AGTTTATGCCATTCTTTGAATATGGTTCTTGGACTCCTACATTACTaGTGCCAACCCCACCCAGAAATTTTCTTATTTGCCAAGTATTTT | + |
|
Preference number: 5 (lower is better) Translates to: SLCHSLNMVLGLLHY*CQPHPEIFLFAKYF Trigger: AAAATACTTGGCAAATAAGAAAATTTCTGGGTGGGGTTGGCAGCAGTAATGTAGGAGTCCAAGAACCATATTCAAAGAATGGCATAAACT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000331493.7 ENST00000517484.5 ENST00000520776.5 |
||
| CDS CCA 90 bp | AAGGAACAATTGTTCTGTAATTTATTGACGAGATTATCAAAAAGTTaGCAGGTCTTAATTTGCTGGATGAATCAGGTACCGCATAAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: KEQLFCNLLTRLSKS*QVLICWMNQVPHKP Trigger: AGGCTTATGCGGTACCTGATTCATCCAGCAAATTAAGACCTGCCAACTTTTTGATAATCTCGTCAATAAATTACAGAACAATTGTTCCTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000331493.7 ENST00000517310.5 ENST00000517484.5 ENST00000519772.5 ENST00000520802.5 ENST00000523285.5 |
||
| CDS GCA 72 bp | GGAGCGGGCCCAGGACCCTATCGGCTGTCGAGCCGGTaGTGCCGCGGCCACCGCCACCGCCCAGGGGCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: GAGPGPYRLSSR*CRGHRHRPGAP Trigger: CGGAGCCCCTGGGCGGTGGCGGTGGCCGCGGCAGCACCGGCTCGACAGCCGATAGGGTCCTGGGCCCGCTCC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000517310.5 |
||
| CDS CCA 72 bp | CGCGGCCACCGCCACCGCCCAGGGGCTCCGGGGCTGTaGGGAGCGGCTGAACTCAATACCGCCTCCGCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: RGHRHRPGAPGL*GAAELNTASAL Trigger: CAGCGCGGAGGCGGTATTGAGTTCAGCCGCTCCCCACAGCCCCGGAGCCCCTGGGCGGTGGCGGTGGCCGCG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000517310.5 |
||
| CDS GCA 72 bp | CCGGGCGCTGCATTCGAGCGGTGGGGCTCCTGTCCGTaGGCTTTCCTCCCGCAGCCCCGGCCGGGATTCCGC | + |
|
Preference number: 6 (lower is better) Translates to: PGAAFERWGSCP*AFLPQPRPGFR Trigger: GCGGAATCCCGGCCGGGGCTGCGGGAGGAAAGCGCACGGACAGGAGCCCCACCGCTCGAATGCAGCGCCCGG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000523285.5 |
||
| CDS GCA 72 bp | CTCTGTGGTCAGCCCCTGCCGCCCCTCGGGCGGCGCTaGTCTAGCTCTGCAGCCTTCCCAGGATCCCGCGCC | + |
|
Preference number: 6 (lower is better) Translates to: LCGQPLPPLGRR*SSSAAFPGSRA Trigger: GGCGCGGGATCCTGGGAAGGCTGCAGAGCTAGAGCAGCGCCGCCCGAGGGGCGGCAGGGGCTGACCACAGAG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000331493.7 |
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| CDS CCA 72 bp | TCACGAGGCCAGCCGCCGGGCGCTGCATTCGAGCGGTaGGGCTCCTGTCCGTGCGCTTTCCTCCCGCAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: SRGQPPGAAFER*GSCPCAFLPQP Trigger: GGGCTGCGGGAGGAAAGCGCACGGACAGGAGCCCCACCGCTCGAATGCAGCGCCCGGCGGCTGGCCTCGTGA 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523285.5 |
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| CDS CAA 72 bp | CTCCCGCAGCCCCGGCCGGGATTCCGCCCTCCGTCCTaGCCACCCGCTCGCCACTCTTCCCTAATCGCTGTT | + |
|
Preference number: 6 (lower is better) Translates to: LPQPRPGFRPPS*PPARHSSLIAV Trigger: AACAGCGATTAGGGAAGAGTGGCGAGCGGGTGGCAAGGACGGAGGGCGGAATCCCGGCCGGGGCTGCGGGAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523285.5 |
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| CDS TCA 72 bp | GTACCGCATAAGCCTCTCCAAACTCGTAAGGGCCTGTaGCCTCACGAGGCCAGCCGCCGGGCGCTGCATTCG | + |
|
Preference number: 6 (lower is better) Translates to: VPHKPLQTRKGL*PHEASRRALHS Trigger: CGAATGCAGCGCCCGGCGGCTGGCCTCGTGAGGTCACAGGCCCTTACGAGTTTGGAGAGGCTTATGCGGTAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000523285.5 |
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| CDS GCA 72 bp | CCAAGAACCCACGCTGAGGAGGCTTCCCATAGACCCTaGTCTTACGAAGCCAACGACTTCGGCCCGAGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: PRTHAEEASHRP*SYEANDFGPSC Trigger: GCAGCTCGGGCCGAAGTCGTTGGCTTCGTAAGAGCAGGGTCTATGGGAAGCCTCCTCAGCGTGGGTTCTTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000331493.7 ENST00000517484.5 ENST00000520802.5 |
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| CDS GCA 72 bp | CCAAGAACCCACGCTGAGGAGGCTTCCCATAGACCCTaGTCTTACGAAGCCAACGACTTCTCTGTCCCCCAA | + |
|
Preference number: 6 (lower is better) Translates to: PRTHAEEASHRP*SYEANDFSVPQ Trigger: TTGGGGGACAGAGAAGTCGTTGGCTTCGTAAGAGCAGGGTCTATGGGAAGCCTCCTCAGCGTGGGTTCTTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000519772.5 |
||
| CDS TCA 72 bp | ACAGCAGCTCGAAGGCCATGTGTCCCACGGCTTTGCTaGAATTTGTCTCGGGTTGCCTTTAAGGAGACTGTC | + |
|
Preference number: 6 (lower is better) Translates to: TAARRPCVPRLC*NLSRVAFKETV Trigger: GACAGTCTCCTTAAAGGCAACCCGAGACAAATTTCAGCAAAGCCGTGGGACACATGGCCTTCGAGCTGCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000518170.1 |
||
| CDS CAA 72 bp | CCAGGCAACGCATTGCATTCAGGAAAACTTCGCTCCTaGGCGAGAGCATTTACAAAGTCATCTAACTCCACC | + |
|
Preference number: 6 (lower is better) Translates to: PGNALHSGKLRS*ARAFTKSSNST Trigger: GGTGGAGTTAGATGACTTTGTAAATGCTCTCGCCAAGGAGCGAAGTTTTCCTGAATGCAATGCGTTGCCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000331493.7 ENST00000517484.5 ENST00000520776.5 ENST00000522326.1 ENST00000523842.1 |
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| CDS CAA 90 bp | CTCGAAGGCCATGTGTCCCACGGCTTTGCTGAAATTTGTCTCGGGTaGCCTTTAAGGAGACTGTCGTTTCCTTTTGAAAGAGATACTTTG | + |
|
Preference number: 6 (lower is better) Translates to: LEGHVSHGFAEICLG*PLRRLSFPFERDTL Trigger: CAAAGTATCTCTTTCAAAAGGAAACGACAGTCTCCTTAAAGGCAACCCGAGACAAATTTCAGCAAAGCCGTGGGACACATGGCCTTCGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518170.1 |
||
| CDS CCA 72 bp | CAGGCAACGCATTGCATTCAGGAAAACTTCGCTCCTTaGCGAGAGCATTTACAAAGTCATCTAACTCCACCA | + |
|
Preference number: 6 (lower is better) Translates to: QATHCIQENFAP*REHLQSHLTPP Trigger: TGGTGGAGTTAGATGACTTTGTAAATGCTCTCGCCAAGGAGCGAAGTTTTCCTGAATGCAATGCGTTGCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000331493.7 ENST00000517484.5 ENST00000520776.5 ENST00000522326.1 ENST00000523842.1 |
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| CDS GCA 72 bp | GGTTCTTTCCAGCGTCTCTCTATAAAAGAAAACTTCTaGCCAACCCTTGAGACACCTACAGATCTTACGGTC | + |
|
Preference number: 6 (lower is better) Translates to: GSFQRLSIKENF*PTLETPTDLTV Trigger: GACCGTAAGATCTGTAGGTGTCTCAAGGGTTGGGCAGAAGTTTTCTTTTATAGAGAGACGCTGGAAAGAACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000517310.5 |
||
| CDS CAA 72 bp | CATGTGTCCCACGGCTTTGCTGAAATTTGTCTCGGGTaGCCTTTAAGGAGACTGTCGTTTCCTTTTGAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: HVSHGFAEICLG*PLRRLSFPFER Trigger: TCTTTCAAAAGGAAACGACAGTCTCCTTAAAGGCAACCCGAGACAAATTTCAGCAAAGCCGTGGGACACATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518170.1 |
||
| CDS CAA 90 bp | TTAATGACACCAGGCAACGCATTGCATTCAGGAAAACTTCGCTCCTaGGCGAGAGCATTTACAAAGTCATCTAACTCCACCATTCCATTC | + |
|
Preference number: 6 (lower is better) Translates to: LMTPGNALHSGKLRS*ARAFTKSSNSTIPF Trigger: GAATGGAATGGTGGAGTTAGATGACTTTGTAAATGCTCTCGCCAAGGAGCGAAGTTTTCCTGAATGCAATGCGTTGCCTGGTGTCATTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000331493.7 ENST00000517484.5 ENST00000520776.5 ENST00000522326.1 ENST00000523842.1 |
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| CDS TCA 72 bp | GCCCGCCTAAGACCATTTTACTTCTTGGATAATGCATaGTTGAGGATGTGTTCAGATGCAGTCACCTTGAAT | + |
|
Preference number: 6 (lower is better) Translates to: ARLRPFYFLDNA*LRMCSDAVTLN Trigger: ATTCAAGGTGACTGCATCTGAACACATCCTCAATCATGCATTATCCAAGAAGTAAAATGGTCTTAGGCGGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523978.1 |
||
| CDS GCA 72 bp | TTGACGAGATTATCAAAAAGTTGGCAGGTCTTAATTTaGTGGATGAATCAGGTACCGCATAAGCCTCTCCAA | + |
|
Preference number: 6 (lower is better) Translates to: LTRLSKSWQVLI*WMNQVPHKPLQ Trigger: TTGGAGAGGCTTATGCGGTACCTGATTCATCCAGCAAATTAAGACCTGCCAACTTTTTGATAATCTCGTCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000331493.7 ENST00000517310.5 ENST00000517484.5 ENST00000519772.5 ENST00000520802.5 ENST00000523285.5 |
||
| CDS GCA 72 bp | TCTTTGAATATGGTTCTTGGACTCCTACATTACTGCTaGCAACCCCACCCAGAAATTTTCTTATTTGCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: SLNMVLGLLHYC*QPHPEIFLFAK Trigger: CTTGGCAAATAAGAAAATTTCTGGGTGGGGTTGGCAGCAGTAATGTAGGAGTCCAAGAACCATATTCAAAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000331493.7 ENST00000517484.5 ENST00000520776.5 |
||
| CDS GCA 72 bp | CATTCTTTGAATATGGTTCTTGGACTCCTACATTACTaGTGCCAACCCCACCCAGAAATTTTCTTATTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: HSLNMVLGLLHY*CQPHPEIFLFA Trigger: GGCAAATAAGAAAATTTCTGGGTGGGGTTGGCAGCAGTAATGTAGGAGTCCAAGAACCATATTCAAAGAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000331493.7 ENST00000517484.5 ENST00000520776.5 |
||
| CDS CCA 72 bp | ACGAGATTATCAAAAAGTTGGCAGGTCTTAATTTGCTaGATGAATCAGGTACCGCATAAGCCTCTCCAAACT | + |
|
Preference number: 6 (lower is better) Translates to: TRLSKSWQVLIC*MNQVPHKPLQT Trigger: AGTTTGGAGAGGCTTATGCGGTACCTGATTCATCCAGCAAATTAAGACCTGCCAACTTTTTGATAATCTCGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000331493.7 ENST00000517310.5 ENST00000517484.5 ENST00000519772.5 ENST00000520802.5 ENST00000523285.5 |
||
| CDS CAA 72 bp | CATTTCAAGGCATGCTCCAAATCAGGTATACCAATCTaGCCATTATCGACATGTGACAAGATGTTAGCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: HFKACSKSGIPI*PLSTCDKMLAA Trigger: AGCTGCTAACATCTTGTCACATGTCGATAATGGCAAGATTGGTATACCTGATTTGGAGCATGCCTTGAAATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000331493.7 ENST00000517484.5 |
||
| CDS CAA 72 bp | ACCTACCTGAAGTTATCTCTTCAATGTAACACTGACTaGGGGTATGATACACAACATTTCACCAACACAGAT | + |
|
Preference number: 6 (lower is better) Translates to: TYLKLSLQCNTD*GYDTQHFTNTD Trigger: ATCTGTGTTGGTGAAATGTTGTGTATCATACCCCAAGTCAGTGTTACATTGAAGAGATAACTTCAGGTAGGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518646.5 |
||
| CDS CAA 90 bp | TCCACCTCCATATTATCACTGACGTTACAACAGTTAAGGGCTTCATaGAAGTCCTCCTCAGTTAAATTAACATTCAAACATTTCAAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: STSILSLTLQQLRAS*KSSSVKLTFKHFKA Trigger: TGCCTTGAAATGTTTGAATGTTAATTTAACTGAGGAGGACTTCAATGAAGCCCTTAACTGTTGTAACGTCAGTGATAATATGGAGGTGGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000331493.7 ENST00000517484.5 |
||
| CDS CAA 90 bp | ATTATATTTACCTACCTGAAGTTATCTCTTCAATGTAACACTGACTaGGGGTATGATACACAACATTTCACCAACACAGATATGTGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: IIFTYLKLSLQCNTD*GYDTQHFTNTDMWA Trigger: TGCCCACATATCTGTGTTGGTGAAATGTTGTGTATCATACCCCAAGTCAGTGTTACATTGAAGAGATAACTTCAGGTAGGTAAATATAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000518646.5 |
||
| CDS CCA 72 bp | TTGTTCTGTAATTTATTGACGAGATTATCAAAAAGTTaGCAGGTCTTAATTTGCTGGATGAATCAGGTACCG | + |
|
Preference number: 6 (lower is better) Translates to: LFCNLLTRLSKS*QVLICWMNQVP Trigger: CGGTACCTGATTCATCCAGCAAATTAAGACCTGCCAACTTTTTGATAATCTCGTCAATAAATTACAGAACAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 6 transcripts: ENST00000331493.7 ENST00000517310.5 ENST00000517484.5 ENST00000519772.5 ENST00000520802.5 ENST00000523285.5 |
||
| CDS CAA 72 bp | ATGTCATTTCAATTGTGCACAGAGGTAGAAAATGCTTaGCCCAATAGTTCTTGCCTCCATATATTTGATTTT | + |
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Preference number: 6 (lower is better) Translates to: MSFQLCTEVENA*PNSSCLHIFDF Trigger: AAAATCAAATATATGGAGGCAAGAACTATTGGGCAAAGCATTTTCTACCTCTGTGCACAATTGAAATGACAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000523978.1 |
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