RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EFCAB12 (Homo sapiens)

Ensembl gene IDs: ENSG00000172771

Ensembl transcript IDs: ENST00000326085.7, ENST00000503498.1, ENST00000503957.1, ENST00000505956.6, ENST00000514900.5

Found 399 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ACGTCATTCCTTGGACACATCTACCCTCTGAGACACTGGACACTTTaGGTCCAGAGGGAACTGGCCCCCGGTCCATCCCTCTTTGAAAGG +
Preference number: 1 (lower is better)
Translates to: TSFLGHIYPLRHWTL*VQRELAPGPSLFER
Trigger: CCTTTCAAAGAGGGATGGACCGGGGGCCAGTTCCCTCTGGACTCAAAGTGTCCAGTGTCTCAGAGGGTAGATGTGTCCAAGGAATGACGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
3UTR CCA 90 bp CAGAGGTCAGGGGAGGGAAATAGTCAAAAACTGCACGTCATTCCTTaGACACATCTACCCTCTGAGACACTGGACACTTTGAGTCCAGAG +
Preference number: 1 (lower is better)
Translates to: QRSGEGNSQKLHVIP*THLPSETLDTLSPE
Trigger: CTCTGGACTCAAAGTGTCCAGTGTCTCAGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATTTCCCTCCCCTGACCTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
3UTR GCA 90 bp TTATGTAGAAAGGGCAGAGGTCAGGGGAGGGAAATAGTCAAAAACTaGACGTCATTCCTTGGACACATCTACCCTCTGAGACACTGGACA +
Preference number: 1 (lower is better)
Translates to: LCRKGRGQGREIVKN*TSFLGHIYPLRHWT
Trigger: TGTCCAGTGTCTCAGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATTTCCCTCCCCTGACCTCTGCCCTTTCTACATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
3UTR-3UTR CCA 90 bp ACACATCTACCCTCTGAGACACTGGACACTTTGAGTCCAGAGGGAACTGGCCCCCTGGCCCAGGAAGGCTaGGTCCGGCAACACCTGGCT +
Preference number: 2 (lower is better)
Translates to: THLPSETLDTLSPEGTGPLAQEG*VRQHLA
Trigger: AGCCAGGTGTTGCCGGACCCAGCCTTCCTGGGCCAG...GGGGCCAGTTCCCTCTGGACTCAAAGTGTCCAGTGTCTCAGAGGGTAGATGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
3UTR-3UTR CCA 90 bp AAACTGCACGTCATTCCTTGGACACATCTACCCTCTGAGACACTGGACACTTTGTGGGCTCTGGGCCGCTaGCTGCACTGGCCCCTGGCC +
Preference number: 2 (lower is better)
Translates to: KLHVIPWTHLPSETLDTLWALGR*LHWPLA
Trigger: GGCCAGGGGCCAGTGCAGCCAGCGGCCCAGAGCCCA...CAAAGTGTCCAGTGTCTCAGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
3UTR-3UTR CCA 90 bp GGGGAGGGAAATAGTCAAAAACTGCACGTCATTCCTTGGACACATCTACCCTCTTGGGCTCTGGGCCGCTaGCTGCACTGGCCCCTGGCC +
Preference number: 2 (lower is better)
Translates to: GEGNSQKLHVIPWTHLPSWALGR*LHWPLA
Trigger: GGCCAGGGGCCAGTGCAGCCAGCGGCCCAGAGCCCA...AGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATTTCCCTCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
3UTR-3UTR CCA 90 bp AAACTCCAACCTGCTTTATGTAGAAAGGGCAGAGGTCAGGGGAGGGAAATAGTCCTGGCCCAGGAAGGCTaGGTCCGGCAACACCTGGCT +
Preference number: 2 (lower is better)
Translates to: KLQPALCRKGRGQGREIVLAQEG*VRQHLA
Trigger: AGCCAGGTGTTGCCGGACCCAGCCTTCCTGGGCCAG...GACTATTTCCCTCCCCTGACCTCTGCCCTTTCTACATAAAGCAGGTTGGAGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
3UTR-3UTR CCA 90 bp CAACCTGCTTTATGTAGAAAGGGCAGAGGTCAGGGGAGGGAAATAGTCAAAAACCTTGTGTCTGGGCTCTaGGCCGCTGGCTGCACTGGC +
Preference number: 2 (lower is better)
Translates to: QPALCRKGRGQGREIVKNLVSGL*AAGCTG
Trigger: GCCAGTGCAGCCAGCGGCCCAGAGCCCAGACACAAG...GTTTTTGACTATTTCCCTCCCCTGACCTCTGCCCTTTCTACATAAAGCAGGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
3UTR-3UTR CCA 90 bp GGTCAGGGGAGGGAAATAGTCAAAAACTGCACGTCATTCCTTGGACACATCTACCACTCCTCTTGTGTCTaGGCTCTGGGCCGCTGGCTG +
Preference number: 2 (lower is better)
Translates to: GQGREIVKNCTSFLGHIYHSSCV*ALGRWL
Trigger: CAGCCAGCGGCCCAGAGCCCAGACACAAGAGGAGTG...GTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATTTCCCTCCCCTGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
3UTR-3UTR CCA 90 bp GGTCAGGGGAGGGAAATAGTCAAAAACTGCACGTCATTCCTTGGACACATCTACGAGTCCAGAGGGAACTaGCCCCCGGTCCATCCCTCT +
Preference number: 2 (lower is better)
Translates to: GQGREIVKNCTSFLGHIYESRGN*PPVHPS
Trigger: AGAGGGATGGACCGGGGGCCAGTTCCCTCTGGACTC...GTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATTTCCCTCCCCTGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
3UTR-3UTR CCA 90 bp AATGAGAAAAACTCCAACCTGCTTTATGTAGAAAGGGCAGAGGTCAGGGGAGGGCTGCACGTCATTCCTTaGACACATCTACCCTCTGAG +
Preference number: 2 (lower is better)
Translates to: NEKNSNLLYVERAEVRGGLHVIP*THLPSE
Trigger: CTCAGAGGGTAGATGTGTCCAAGGAATGACGTGCAG...CCCTCCCCTGACCTCTGCCCTTTCTACATAAAGCAGGTTGGAGTTTTTCTCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
3UTR-3UTR TCA 90 bp GTCAAAAACTGCACGTCATTCCTTGGACACATCTACCCTCTGAGACACTGGACATTTAGTTTGACTCTTTaGCACTCCTCTTGTGTCTGG +
Preference number: 2 (lower is better)
Translates to: VKNCTSFLGHIYPLRHWTFSLTL*HSSCVW
Trigger: CCAGACACAAGAGGAGTGTCAAAGAGTCAAACTAAA...TGTCCAGTGTCTCAGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
3UTR-3UTR TCA 90 bp AATAGTCAAAAACTGCACGTCATTCCTTGGACACATCTACCCTCTGAGACACTGTTTAGTTTGACTCTTTaGCACTCCTCTTGTGTCTGG +
Preference number: 2 (lower is better)
Translates to: NSQKLHVIPWTHLPSETLFSLTL*HSSCVW
Trigger: CCAGACACAAGAGGAGTGTCAAAGAGTCAAACTAAA...CAGTGTCTCAGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
3UTR TCA 72 bp AAAACTGCACGTCATTCCTTGGACACATCTACCCTCTaGGACACTGGACACTTTGAGTCCAGAGGGAACTGG +
Preference number: 3 (lower is better)
Translates to: KTARHSLDTSTL*DTGHFESRGNW
Trigger: CCAGTTCCCTCTGGACTCAAAGTGTCCAGTGTCTCAGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
3UTR CCA 72 bp GGGGAGGGAAATAGTCAAAAACTGCACGTCATTCCTTaGACACATCTACCCTCTGAGACACTGGACACTTTG +
Preference number: 3 (lower is better)
Translates to: GEGNSQKLHVIP*THLPSETLDTL
Trigger: CAAAGTGTCCAGTGTCTCAGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATTTCCCTCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CCA 90 bp ACACATCTACCCTCTGAGACACTGGACACTTTGAGTCCAGAGGGAACTGGCCCCTGGGCTCTGGGCCGCTaGCTGCACTGGCCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: THLPSETLDTLSPEGTGPWALGR*LHWPLA
Trigger: GGCCAGGGGCCAGTGCAGCCAGCGGCCCAGAGCCCA...GGGGCCAGTTCCCTCTGGACTCAAAGTGTCCAGTGTCTCAGAGGGTAGATGTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CCA 90 bp CCCTCTGAGACACTGGACACTTTGAGTCCAGAGGGAACTGGCCCCCGGTCCATCGAGTCCAGAGGGAACTaGCCCCCGGTCCATCCCTCT +
Preference number: 4 (lower is better)
Translates to: PSETLDTLSPEGTGPRSIESRGN*PPVHPS
Trigger: AGAGGGATGGACCGGGGGCCAGTTCCCTCTGGACTC...GATGGACCGGGGGCCAGTTCCCTCTGGACTCAAAGTGTCCAGTGTCTCAGAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR TCA 90 bp CCCTCTGAGACACTGGACACTTTGAGTCCAGAGGGAACTGGCCCCCGGTCCATCGGCTTTGGGGGAGCCTaGGGTTGGGATGCAGGATTA +
Preference number: 4 (lower is better)
Translates to: PSETLDTLSPEGTGPRSIGFGGA*GWDAGL
Trigger: TAATCCTGCATCCCAACCTCAGGCTCCCCCAAAGCC...GATGGACCGGGGGCCAGTTCCCTCTGGACTCAAAGTGTCCAGTGTCTCAGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CCA 90 bp CCCTCTGAGACACTGGACACTTTGAGTCCAGAGGGAACTGGCCCCCGGTCCATCGTCCTGGTAGTTGCCTaGGAGGCATTTGGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: PSETLDTLSPEGTGPRSIVLVVA*EAFGWA
Trigger: TGCCCAGCCAAATGCCTCCCAGGCAACTACCAGGAC...GATGGACCGGGGGCCAGTTCCCTCTGGACTCAAAGTGTCCAGTGTCTCAGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CCA 90 bp ACACATCTACCCTCTGAGACACTGGACACTTTGAGTCCAGAGGGAACTGGCCCCGACTTGCCAGGGCCCTaGGACCGGAGCAGAGCCAGA +
Preference number: 4 (lower is better)
Translates to: THLPSETLDTLSPEGTGPDLPGP*DRSRAR
Trigger: TCTGGCTCTGCTCCGGTCCCAGGGCCCTGGCAAGTC...GGGGCCAGTTCCCTCTGGACTCAAAGTGTCCAGTGTCTCAGAGGGTAGATGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CCA 90 bp CCCTCTGAGACACTGGACACTTTGAGTCCAGAGGGAACTGGCCCCCGGTCCATCAATGCTCCCTTGCAGTaGCCAGGCTGCTCCTTTGCT +
Preference number: 4 (lower is better)
Translates to: PSETLDTLSPEGTGPRSINAPLQ*PGCSFA
Trigger: AGCAAAGGAGCAGCCTGGCCACTGCAAGGGAGCATT...GATGGACCGGGGGCCAGTTCCCTCTGGACTCAAAGTGTCCAGTGTCTCAGAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR TCA 90 bp CCCTCTGAGACACTGGACACTTTGAGTCCAGAGGGAACTGGCCCCCGGTCCATCCTGGCTAGCTCTAGTTaGTGTAGTACACCTTGGCGG +
Preference number: 4 (lower is better)
Translates to: PSETLDTLSPEGTGPRSILASSS*CSTPWR
Trigger: CCGCCAAGGTGTACTACATCAACTAGAGCTAGCCAG...GATGGACCGGGGGCCAGTTCCCTCTGGACTCAAAGTGTCCAGTGTCTCAGAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR GCA 90 bp CCCTCTGAGACACTGGACACTTTGAGTCCAGAGGGAACTGGCCCCCGGTCCATCTTGGGGTGTGTTTGCTaGAGACCACTGGACCTCTTC +
Preference number: 4 (lower is better)
Translates to: PSETLDTLSPEGTGPRSILGCVC*RPLDLF
Trigger: GAAGAGGTCCAGTGGTCTGCAGCAAACACACCCCAA...GATGGACCGGGGGCCAGTTCCCTCTGGACTCAAAGTGTCCAGTGTCTCAGAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CCA 90 bp CCCTCTGAGACACTGGACACTTTGAGTCCAGAGGGAACTGGCCCCCGGTCCATCGAATGTGTGTCGATGTaGGCTTGCTTGCGTAGGGGT +
Preference number: 4 (lower is better)
Translates to: PSETLDTLSPEGTGPRSIECVSM*ACLRRG
Trigger: ACCCCTACGCAAGCAAGCCCACATCGACACACATTC...GATGGACCGGGGGCCAGTTCCCTCTGGACTCAAAGTGTCCAGTGTCTCAGAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CCA 90 bp AAACTGCACGTCATTCCTTGGACACATCTACCCTCTGAGACACTGGACACTTTGGGGGGCTCGGGCAGCTaGAGCTGGGGCACCATCTGG +
Preference number: 4 (lower is better)
Translates to: KLHVIPWTHLPSETLDTLGGSGS*SWGTIW
Trigger: CCAGATGGTGCCCCAGCTCCAGCTGCCCGAGCCCCC...CAAAGTGTCCAGTGTCTCAGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CCA 90 bp ACACATCTACCCTCTGAGACACTGGACACTTTGAGTCCAGAGGGAACTGGCCCCGGTCTGTGGCCACAGTaGGCAGGTAGAGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: THLPSETLDTLSPEGTGPGLWPQ*AGRAAA
Trigger: AGCTGCAGCTCTACCTGCCCACTGTGGCCACAGACC...GGGGCCAGTTCCCTCTGGACTCAAAGTGTCCAGTGTCTCAGAGGGTAGATGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR GCA 90 bp ACACATCTACCCTCTGAGACACTGGACACTTTGAGTCCAGAGGGAACTGGCCCCCGATGTGGGCTTGCTTaGGTAGGGGTACCGGGGTAT +
Preference number: 4 (lower is better)
Translates to: THLPSETLDTLSPEGTGPRCGLA*VGVPGY
Trigger: ATACCCCGGTACCCCTACGCAAGCAAGCCCACATCG...GGGGCCAGTTCCCTCTGGACTCAAAGTGTCCAGTGTCTCAGAGGGTAGATGTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR GCA 90 bp ACACATCTACCCTCTGAGACACTGGACACTTTGAGTCCAGAGGGAACTGGCCCCAAGGACTCTAGCTCCTaGCGCAGCTTCGACCTCTGG +
Preference number: 4 (lower is better)
Translates to: THLPSETLDTLSPEGTGPKDSSS*RSFDLW
Trigger: CCAGAGGTCGAAGCTGCGGCAGGAGCTAGAGTCCTT...GGGGCCAGTTCCCTCTGGACTCAAAGTGTCCAGTGTCTCAGAGGGTAGATGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CCA 90 bp GAGAAAAACTCCAACCTGCTTTATGTAGAAAGGGCAGAGGTCAGGGGAGGGAAAAGCTGGGGCACCATCTaGCGGGACAGCCGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: EKNSNLLYVERAEVRGGKSWGTI*RDSRES
Trigger: GCTCTCCCGGCTGTCCCGCCAGATGGTGCCCCAGCT...TTTCCCTCCCCTGACCTCTGCCCTTTCTACATAAAGCAGGTTGGAGTTTTTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CCA 90 bp GTCAAAAACTGCACGTCATTCCTTGGACACATCTACCCTCTGAGACACTGGACAAGCTGGGGCACCATCTaGCGGGACAGCCGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: VKNCTSFLGHIYPLRHWTSWGTI*RDSRES
Trigger: GCTCTCCCGGCTGTCCCGCCAGATGGTGCCCCAGCT...TGTCCAGTGTCTCAGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CCA 90 bp CAACCTGCTTTATGTAGAAAGGGCAGAGGTCAGGGGAGGGAAATAGTCAAAAACGGGGGCTCGGGCAGCTaGAGCTGGGGCACCATCTGG +
Preference number: 4 (lower is better)
Translates to: QPALCRKGRGQGREIVKNGGSGS*SWGTIW
Trigger: CCAGATGGTGCCCCAGCTCCAGCTGCCCGAGCCCCC...GTTTTTGACTATTTCCCTCCCCTGACCTCTGCCCTTTCTACATAAAGCAGGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CCA 90 bp GAAATAGTCAAAAACTGCACGTCATTCCTTGGACACATCTACCCTCTGAGACACTGGGCTCTGGGCCGCTaGCTGCACTGGCCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: EIVKNCTSFLGHIYPLRHWALGR*LHWPLA
Trigger: GGCCAGGGGCCAGTGCAGCCAGCGGCCCAGAGCCCA...GTGTCTCAGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR TCA 90 bp TGTAGAAAGGGCAGAGGTCAGGGGAGGGAAATAGTCAAAAACTGCACGTCATTCATTCGCCGGCGGGTCTaGGGCAGGCGGAAGTCCTTC +
Preference number: 4 (lower is better)
Translates to: CRKGRGQGREIVKNCTSFIRRRV*GRRKSF
Trigger: GAAGGACTTCCGCCTGCCTCAGACCCGCCGGCGAAT...GAATGACGTGCAGTTTTTGACTATTTCCCTCCCCTGACCTCTGCCCTTTCTACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR TCA 90 bp CCCTCTGAGACACTGGACACTTTGAGTCCAGAGGGAACTGGCCCCCGGTCCATCATATCTCCAGGATCTTaGTCTTGCGGCTATGCAGGT +
Preference number: 4 (lower is better)
Translates to: PSETLDTLSPEGTGPRSIISPGS*SCGYAG
Trigger: ACCTGCATAGCCGCAAGATCAAGATCCTGGAGATAT...GATGGACCGGGGGCCAGTTCCCTCTGGACTCAAAGTGTCCAGTGTCTCAGAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR GCA 90 bp AAACTGCACGTCATTCCTTGGACACATCTACCCTCTGAGACACTGGACACTTTGGGCCGCGTCTCCATCTaGGTGTCGACTGCAGGCACC +
Preference number: 4 (lower is better)
Translates to: KLHVIPWTHLPSETLDTLGRVSI*VSTAGT
Trigger: GGTGCCTGCAGTCGACACGCAGATGGAGACGCGGCC...CAAAGTGTCCAGTGTCTCAGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR GCA 90 bp GGTCAGGGGAGGGAAATAGTCAAAAACTGCACGTCATTCCTTGGACACATCTACGGGATCGTGAGCTTGTaGTGTCGCTGCCGCTCGCGG +
Preference number: 4 (lower is better)
Translates to: GQGREIVKNCTSFLGHIYGIVSL*CRCRSR
Trigger: CCGCGAGCGGCAGCGACAGCACAAGCTCACGATCCC...GTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATTTCCCTCCCCTGACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR GCA 90 bp GAGAAAAACTCCAACCTGCTTTATGTAGAAAGGGCAGAGGTCAGGGGAGGGAAAGGGATCGTGAGCTTGTaGTGTCGCTGCCGCTCGCGG +
Preference number: 4 (lower is better)
Translates to: EKNSNLLYVERAEVRGGKGIVSL*CRCRSR
Trigger: CCGCGAGCGGCAGCGACAGCACAAGCTCACGATCCC...TTTCCCTCCCCTGACCTCTGCCCTTTCTACATAAAGCAGGTTGGAGTTTTTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CCA 90 bp CAGGGGAGGGAAATAGTCAAAAACTGCACGTCATTCCTTGGACACATCTACCCTCCATGGTCGTGGTGCTaGGAGGGGGTGCTGAAGGGC +
Preference number: 4 (lower is better)
Translates to: QGREIVKNCTSFLGHIYPPWSWC*EGVLKG
Trigger: GCCCTTCAGCACCCCCTCCCAGCACCACGACCATGG...AGGGTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATTTCCCTCCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CCA 90 bp GGGGAGGGAAATAGTCAAAAACTGCACGTCATTCCTTGGACACATCTACCCTCTCCATGGTCGTGGTGCTaGGAGGGGGTGCTGAAGGGC +
Preference number: 4 (lower is better)
Translates to: GEGNSQKLHVIPWTHLPSPWSWC*EGVLKG
Trigger: GCCCTTCAGCACCCCCTCCCAGCACCACGACCATGG...AGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATTTCCCTCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CCA 90 bp CAACCTGCTTTATGTAGAAAGGGCAGAGGTCAGGGGAGGGAAATAGTCAAAAACTCGGGCAGCTGGAGCTaGGGCACCATCTGGCGGGAC +
Preference number: 4 (lower is better)
Translates to: QPALCRKGRGQGREIVKNSGSWS*GTIWRD
Trigger: GTCCCGCCAGATGGTGCCCCAGCTCCAGCTGCCCGA...GTTTTTGACTATTTCCCTCCCCTGACCTCTGCCCTTTCTACATAAAGCAGGTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CCA 90 bp AATGAGAAAAACTCCAACCTGCTTTATGTAGAAAGGGCAGAGGTCAGGGGAGGGGACTTGCCAGGGCCCTaGGACCGGAGCAGAGCCAGA +
Preference number: 4 (lower is better)
Translates to: NEKNSNLLYVERAEVRGGDLPGP*DRSRAR
Trigger: TCTGGCTCTGCTCCGGTCCCAGGGCCCTGGCAAGTC...CCCTCCCCTGACCTCTGCCCTTTCTACATAAAGCAGGTTGGAGTTTTTCTCATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CCA 90 bp GAGAAAAACTCCAACCTGCTTTATGTAGAAAGGGCAGAGGTCAGGGGAGGGAAACTGGCCCAGGAAGGCTaGGTCCGGCAACACCTGGCT +
Preference number: 4 (lower is better)
Translates to: EKNSNLLYVERAEVRGGKLAQEG*VRQHLA
Trigger: AGCCAGGTGTTGCCGGACCCAGCCTTCCTGGGCCAG...TTTCCCTCCCCTGACCTCTGCCCTTTCTACATAAAGCAGGTTGGAGTTTTTCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CCA 90 bp GGGGAGGGAAATAGTCAAAAACTGCACGTCATTCCTTGGACACATCTACCCTCTCTGGCCCAGGAAGGCTaGGTCCGGCAACACCTGGCT +
Preference number: 4 (lower is better)
Translates to: GEGNSQKLHVIPWTHLPSLAQEG*VRQHLA
Trigger: AGCCAGGTGTTGCCGGACCCAGCCTTCCTGGGCCAG...AGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATTTCCCTCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CCA 90 bp CAGGGGAGGGAAATAGTCAAAAACTGCACGTCATTCCTTGGACACATCTACCCTCTTGTGTCTGGGCTCTaGGCCGCTGGCTGCACTGGC +
Preference number: 4 (lower is better)
Translates to: QGREIVKNCTSFLGHIYPLVSGL*AAGCTG
Trigger: GCCAGTGCAGCCAGCGGCCCAGAGCCCAGACACAAG...AGGGTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATTTCCCTCCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR GCA 90 bp CAACCTGCTTTATGTAGAAAGGGCAGAGGTCAGGGGAGGGAAATAGTCAAAAACGGCCGCGTCTCCATCTaGGTGTCGACTGCAGGCACC +
Preference number: 4 (lower is better)
Translates to: QPALCRKGRGQGREIVKNGRVSI*VSTAGT
Trigger: GGTGCCTGCAGTCGACACGCAGATGGAGACGCGGCC...GTTTTTGACTATTTCCCTCCCCTGACCTCTGCCCTTTCTACATAAAGCAGGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR GCA 90 bp ACACATCTACCCTCTGAGACACTGGACACTTTGAGTCCAGAGGGAACTGGCCCCGAATTGGGGTGTGTTTaGTGCAGACCACTGGACCTC +
Preference number: 4 (lower is better)
Translates to: THLPSETLDTLSPEGTGPELGCV*CRPLDL
Trigger: GAGGTCCAGTGGTCTGCAGCAAACACACCCCAATTC...GGGGCCAGTTCCCTCTGGACTCAAAGTGTCCAGTGTCTCAGAGGGTAGATGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CCA 90 bp ACACATCTACCCTCTGAGACACTGGACACTTTGAGTCCAGAGGGAACTGGCCCCCGGAAGTCCTTCTGCTaGAACTGCTTGAAGCAGTGG +
Preference number: 4 (lower is better)
Translates to: THLPSETLDTLSPEGTGPRKSFC*NCLKQW
Trigger: CCACTGCTTCAAGCAGTTCCAGCAGAAGGACTTCCG...GGGGCCAGTTCCCTCTGGACTCAAAGTGTCCAGTGTCTCAGAGGGTAGATGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CCA 90 bp CAGGGGAGGGAAATAGTCAAAAACTGCACGTCATTCCTTGGACACATCTACCCTACAGCCGGGAGAGCCTaGGGGCTTTCTTCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: QGREIVKNCTSFLGHIYPTAGRA*GLSSWW
Trigger: CCACCAGGAAGAAAGCCCCCAGGCTCTCCCGGCTGT...AGGGTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATTTCCCTCCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CCA 90 bp TGTAGAAAGGGCAGAGGTCAGGGGAGGGAAATAGTCAAAAACTGCACGTCATTCACAGCCGGGAGAGCCTaGGGGCTTTCTTCCTGGTGG +
Preference number: 4 (lower is better)
Translates to: CRKGRGQGREIVKNCTSFTAGRA*GLSSWW
Trigger: CCACCAGGAAGAAAGCCCCCAGGCTCTCCCGGCTGT...GAATGACGTGCAGTTTTTGACTATTTCCCTCCCCTGACCTCTGCCCTTTCTACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CCA 90 bp GAAATAGTCAAAAACTGCACGTCATTCCTTGGACACATCTACCCTCTGAGACACTCGGGCAGCTGGAGCTaGGGCACCATCTGGCGGGAC +
Preference number: 4 (lower is better)
Translates to: EIVKNCTSFLGHIYPLRHSGSWS*GTIWRD
Trigger: GTCCCGCCAGATGGTGCCCCAGCTCCAGCTGCCCGA...GTGTCTCAGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CCA 90 bp GGGGAGGGAAATAGTCAAAAACTGCACGTCATTCCTTGGACACATCTACCCTCTTCTCCTCCAGGGTCATaGGCCGCGTCTCCATCTGCG +
Preference number: 4 (lower is better)
Translates to: GEGNSQKLHVIPWTHLPSSPPGS*AASPSA
Trigger: CGCAGATGGAGACGCGGCCCATGACCCTGGAGGAGA...AGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATTTCCCTCCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CCA 90 bp AAACTCCAACCTGCTTTATGTAGAAAGGGCAGAGGTCAGGGGAGGGAAATAGTCTCTCCTCCAGGGTCATaGGCCGCGTCTCCATCTGCG +
Preference number: 4 (lower is better)
Translates to: KLQPALCRKGRGQGREIVSPPGS*AASPSA
Trigger: CGCAGATGGAGACGCGGCCCATGACCCTGGAGGAGA...GACTATTTCCCTCCCCTGACCTCTGCCCTTTCTACATAAAGCAGGTTGGAGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CCA 90 bp AATGAGAAAAACTCCAACCTGCTTTATGTAGAAAGGGCAGAGGTCAGGGGAGGGCACTCCTCTTGTGTCTaGGCTCTGGGCCGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: NEKNSNLLYVERAEVRGGHSSCV*ALGRWL
Trigger: CAGCCAGCGGCCCAGAGCCCAGACACAAGAGGAGTG...CCCTCCCCTGACCTCTGCCCTTTCTACATAAAGCAGGTTGGAGTTTTTCTCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CCA 90 bp CAGGGGAGGGAAATAGTCAAAAACTGCACGTCATTCCTTGGACACATCTACCCTCACTCCTCTTGTGTCTaGGCTCTGGGCCGCTGGCTG +
Preference number: 4 (lower is better)
Translates to: QGREIVKNCTSFLGHIYPHSSCV*ALGRWL
Trigger: CAGCCAGCGGCCCAGAGCCCAGACACAAGAGGAGTG...AGGGTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATTTCCCTCCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CCA 90 bp CAGGGGAGGGAAATAGTCAAAAACTGCACGTCATTCCTTGGACACATCTACCCTGAGTCCAGAGGGAACTaGCCCCCGGTCCATCCCTCT +
Preference number: 4 (lower is better)
Translates to: QGREIVKNCTSFLGHIYPESRGN*PPVHPS
Trigger: AGAGGGATGGACCGGGGGCCAGTTCCCTCTGGACTC...AGGGTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATTTCCCTCCCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR TCA 90 bp GGTCAGGGGAGGGAAATAGTCAAAAACTGCACGTCATTCCTTGGACACATCTACCCACAGCGCACCAGGTaGCATTGCTCCGTGTACTGG +
Preference number: 4 (lower is better)
Translates to: GQGREIVKNCTSFLGHIYPQRTR*HCSVYW
Trigger: CCAGTACACGGAGCAATGTCACCTGGTGCGCTGTGG...GTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATTTCCCTCCCCTGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR TCA 90 bp GTCAAAAACTGCACGTCATTCCTTGGACACATCTACCCTCTGAGACACTGGACACCACAGCGCACCAGGTaGCATTGCTCCGTGTACTGG +
Preference number: 4 (lower is better)
Translates to: VKNCTSFLGHIYPLRHWTPQRTR*HCSVYW
Trigger: CCAGTACACGGAGCAATGTCACCTGGTGCGCTGTGG...TGTCCAGTGTCTCAGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR TCA 90 bp TGTAGAAAGGGCAGAGGTCAGGGGAGGGAAATAGTCAAAAACTGCACGTCATTCTGCGGGCCGAGTCAATaGGCTCCCTCATATCCCCGT +
Preference number: 4 (lower is better)
Translates to: CRKGRGQGREIVKNCTSFCGPSQ*APSYPR
Trigger: ACGGGGATATGAGGGAGCTCATTGACTCGGCCCGCA...GAATGACGTGCAGTTTTTGACTATTTCCCTCCCCTGACCTCTGCCCTTTCTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR TCA 90 bp ACACATCTACCCTCTGAGACACTGGACACTTTGAGTCCAGAGGGAACTGGCCCCGACACATCTACCCTCTaGGACACTGGACACTTTGAG +
Preference number: 4 (lower is better)
Translates to: THLPSETLDTLSPEGTGPDTSTL*DTGHFE
Trigger: CTCAAAGTGTCCAGTGTCTCAGAGGGTAGATGTGTC...GGGGCCAGTTCCCTCTGGACTCAAAGTGTCCAGTGTCTCAGAGGGTAGATGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR GCA 90 bp AAACTCCAACCTGCTTTATGTAGAAAGGGCAGAGGTCAGGGGAGGGAAATAGTCGTGTCGATGTGGGCTTaGTTGCGTAGGGGTACCGGG +
Preference number: 4 (lower is better)
Translates to: KLQPALCRKGRGQGREIVVSMWA*LRRGTG
Trigger: CCCGGTACCCCTACGCAAGCAAGCCCACATCGACAC...GACTATTTCCCTCCCCTGACCTCTGCCCTTTCTACATAAAGCAGGTTGGAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR GCA 90 bp AAACTGCACGTCATTCCTTGGACACATCTACCCTCTGAGACACTGGACACTTTGGTGTCGATGTGGGCTTaGTTGCGTAGGGGTACCGGG +
Preference number: 4 (lower is better)
Translates to: KLHVIPWTHLPSETLDTLVSMWA*LRRGTG
Trigger: CCCGGTACCCCTACGCAAGCAAGCCCACATCGACAC...CAAAGTGTCCAGTGTCTCAGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR GCA 90 bp AAACTGCACGTCATTCCTTGGACACATCTACCCTCTGAGACACTGGACACTTTGGCTCGCGGTACCGCTTaGCCACTTCCTCCATCTCCT +
Preference number: 4 (lower is better)
Translates to: KLHVIPWTHLPSETLDTLARGTA*PLPPSP
Trigger: AGGAGATGGAGGAAGTGGGCAAGCGGTACCGCGAGC...CAAAGTGTCCAGTGTCTCAGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CCA 90 bp CAGGGGAGGGAAATAGTCAAAAACTGCACGTCATTCCTTGGACACATCTACCCTCATAGTCGTCGTCCATaGTCGTGGTGCTGGGAGGGG +
Preference number: 4 (lower is better)
Translates to: QGREIVKNCTSFLGHIYPHSRRP*SWCWEG
Trigger: CCCCTCCCAGCACCACGACCATGGACGACGACTATG...AGGGTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATTTCCCTCCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CCA 90 bp ACACATCTACCCTCTGAGACACTGGACACTTTGAGTCCAGAGGGAACTGGCCCCGGTCTTCCTGTCCTCTaGCTGCTCTTGGATATCTCT +
Preference number: 4 (lower is better)
Translates to: THLPSETLDTLSPEGTGPGLPVL*LLLDIS
Trigger: AGAGATATCCAAGAGCAGCCAGAGGACAGGAAGACC...GGGGCCAGTTCCCTCTGGACTCAAAGTGTCCAGTGTCTCAGAGGGTAGATGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CCA 90 bp GTCAAAAACTGCACGTCATTCCTTGGACACATCTACCCTCTGAGACACTGGACACGCAGCTTCGACCTCTaGCTCAGCCAGGTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: VKNCTSFLGHIYPLRHWTRSFDL*LSQVFL
Trigger: CAGGAAGACCTGGCTGAGCCAGAGGTCGAAGCTGCG...TGTCCAGTGTCTCAGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CCA 90 bp GGGGAGGGAAATAGTCAAAAACTGCACGTCATTCCTTGGACACATCTACCCTCTCGCAGCTTCGACCTCTaGCTCAGCCAGGTCTTCCTG +
Preference number: 4 (lower is better)
Translates to: GEGNSQKLHVIPWTHLPSRSFDL*LSQVFL
Trigger: CAGGAAGACCTGGCTGAGCCAGAGGTCGAAGCTGCG...AGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATTTCCCTCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CCA 90 bp AAACTCCAACCTGCTTTATGTAGAAAGGGCAGAGGTCAGGGGAGGGAAATAGTCTGGGAGGCATTTGGCTaGGCACTCTGCTCCTCGTGG +
Preference number: 4 (lower is better)
Translates to: KLQPALCRKGRGQGREIVWEAFG*ALCSSW
Trigger: CCACGAGGAGCAGAGTGCCCAGCCAAATGCCTCCCA...GACTATTTCCCTCCCCTGACCTCTGCCCTTTCTACATAAAGCAGGTTGGAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CCA 90 bp GGGGAGGGAAATAGTCAAAAACTGCACGTCATTCCTTGGACACATCTACCCTCTTCCCTCATATCCCCGTaGATGGTGGACGGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: GEGNSQKLHVIPWTHLPSSLISP*MVDGRQ
Trigger: CTGCCTCCCGTCCACCATCCACGGGGATATGAGGGA...AGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATTTCCCTCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CCA 90 bp GGTCAGGGGAGGGAAATAGTCAAAAACTGCACGTCATTCCTTGGACACATCTACTCCCTCATATCCCCGTaGATGGTGGACGGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: GQGREIVKNCTSFLGHIYSLISP*MVDGRQ
Trigger: CTGCCTCCCGTCCACCATCCACGGGGATATGAGGGA...GTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATTTCCCTCCCCTGACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CCA 90 bp TGTAGAAAGGGCAGAGGTCAGGGGAGGGAAATAGTCAAAAACTGCACGTCATTCCTCCCGGCTGCCGGATaGGGCACACTTTGTCCATCT +
Preference number: 4 (lower is better)
Translates to: CRKGRGQGREIVKNCTSFLPAAG*GTLCPS
Trigger: AGATGGACAAAGTGTGCCCCATCCGGCAGCCGGGAG...GAATGACGTGCAGTTTTTGACTATTTCCCTCCCCTGACCTCTGCCCTTTCTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CCA 90 bp GAGAAAAACTCCAACCTGCTTTATGTAGAAAGGGCAGAGGTCAGGGGAGGGAAAAGGGTGGTAGGTGGCTaGGTAGACATGGGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: EKNSNLLYVERAEVRGGKRVVGG*VDMGLV
Trigger: CACCAGCCCCATGTCTACCCAGCCACCTACCACCCT...TTTCCCTCCCCTGACCTCTGCCCTTTCTACATAAAGCAGGTTGGAGTTTTTCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CCA 90 bp TGTAGAAAGGGCAGAGGTCAGGGGAGGGAAATAGTCAAAAACTGCACGTCATTCGGTCAGGGTGGTAGGTaGCTGGGTAGACATGGGGCT +
Preference number: 4 (lower is better)
Translates to: CRKGRGQGREIVKNCTSFGQGGR*LGRHGA
Trigger: AGCCCCATGTCTACCCAGCCACCTACCACCCTGACC...GAATGACGTGCAGTTTTTGACTATTTCCCTCCCCTGACCTCTGCCCTTTCTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR TCA 90 bp AAACTGCACGTCATTCCTTGGACACATCTACCCTCTGAGACACTGGACACTTTGGCTGAAGGGCGTGTGTaGATGTGTGTCGATGTGGGC +
Preference number: 4 (lower is better)
Translates to: KLHVIPWTHLPSETLDTLAEGRV*MCVDVG
Trigger: GCCCACATCGACACACATTCACACACGCCCTTCAGC...CAAAGTGTCCAGTGTCTCAGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR TCA 90 bp GGTCAGGGGAGGGAAATAGTCAAAAACTGCACGTCATTCCTTGGACACATCTACGCTGAAGGGCGTGTGTaGATGTGTGTCGATGTGGGC +
Preference number: 4 (lower is better)
Translates to: GQGREIVKNCTSFLGHIYAEGRV*MCVDVG
Trigger: GCCCACATCGACACACATTCACACACGCCCTTCAGC...GTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATTTCCCTCCCCTGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR TCA 90 bp GGTCAGGGGAGGGAAATAGTCAAAAACTGCACGTCATTCCTTGGACACATCTACGGATTAAGGGGTGTCTaGTCCTCCTTGCGAGGCACC +
Preference number: 4 (lower is better)
Translates to: GQGREIVKNCTSFLGHIYGLRGV*SSLRGT
Trigger: GGTGCCTCGCAAGGAGGATCAGACACCCCTTAATCC...GTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATTTCCCTCCCCTGACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR TCA 90 bp GGGGAGGGAAATAGTCAAAAACTGCACGTCATTCCTTGGACACATCTACCCTCTTGGCCTCTGAAGGCGTaGTGCTGGGCTTGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: GEGNSQKLHVIPWTHLPSWPLKA*CWACSP
Trigger: TGGAGAACAAGCCCAGCATCACGCCTTCAGAGGCCA...AGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATTTCCCTCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR TCA 90 bp GAGAAAAACTCCAACCTGCTTTATGTAGAAAGGGCAGAGGTCAGGGGAGGGAAATGGCCTCTGAAGGCGTaGTGCTGGGCTTGTTCTCCA +
Preference number: 4 (lower is better)
Translates to: EKNSNLLYVERAEVRGGKWPLKA*CWACSP
Trigger: TGGAGAACAAGCCCAGCATCACGCCTTCAGAGGCCA...TTTCCCTCCCCTGACCTCTGCCCTTTCTACATAAAGCAGGTTGGAGTTTTTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR TCA 90 bp AATGAGAAAAACTCCAACCTGCTTTATGTAGAAAGGGCAGAGGTCAGGGGAGGGCCACCTCCTGCTTCTTaGGCGGACCCTTCAGGGAAT +
Preference number: 4 (lower is better)
Translates to: NEKNSNLLYVERAEVRGGPPPAS*ADPSGN
Trigger: ATTCCCTGAAGGGTCCGCTCAAGAAGCAGGAGGTGG...CCCTCCCCTGACCTCTGCCCTTTCTACATAAAGCAGGTTGGAGTTTTTCTCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR TCA 90 bp GGGGAGGGAAATAGTCAAAAACTGCACGTCATTCCTTGGACACATCTACCCTCTGGTGTTGAACACAACTaGAGAGCGCCAGGCTCCGGT +
Preference number: 4 (lower is better)
Translates to: GEGNSQKLHVIPWTHLPSGVEHN*RAPGSG
Trigger: ACCGGAGCCTGGCGCTCTTCAGTTGTGTTCAACACC...AGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATTTCCCTCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR GCA 90 bp AATGAGAAAAACTCCAACCTGCTTTATGTAGAAAGGGCAGAGGTCAGGGGAGGGGCGCTCAGCTCAGACTaGAGAAGCAACCTGTTGCCG +
Preference number: 4 (lower is better)
Translates to: NEKNSNLLYVERAEVRGGALSSD*RSNLLP
Trigger: CGGCAACAGGTTGCTTCTGCAGTCTGAGCTGAGCGC...CCCTCCCCTGACCTCTGCCCTTTCTACATAAAGCAGGTTGGAGTTTTTCTCATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000326085.7
CDS-3UTR GCA 90 bp GAGAAAAACTCCAACCTGCTTTATGTAGAAAGGGCAGAGGTCAGGGGAGGGAAACGATGTGGGCTTGCTTaGGTAGGGGTACCGGGGTAT +
Preference number: 4 (lower is better)
Translates to: EKNSNLLYVERAEVRGGKRCGLA*VGVPGY
Trigger: ATACCCCGGTACCCCTACGCAAGCAAGCCCACATCG...TTTCCCTCCCCTGACCTCTGCCCTTTCTACATAAAGCAGGTTGGAGTTTTTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR GCA 90 bp GGGGAGGGAAATAGTCAAAAACTGCACGTCATTCCTTGGACACATCTACCCTCTAAGGACTCTAGCTCCTaGCGCAGCTTCGACCTCTGG +
Preference number: 4 (lower is better)
Translates to: GEGNSQKLHVIPWTHLPSKDSSS*RSFDLW
Trigger: CCAGAGGTCGAAGCTGCGGCAGGAGCTAGAGTCCTT...AGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATTTCCCTCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR GCA 90 bp AAACTCCAACCTGCTTTATGTAGAAAGGGCAGAGGTCAGGGGAGGGAAATAGTCGGTGGTCCTGGTAGTTaGCTGGGAGGCATTTGGCTG +
Preference number: 4 (lower is better)
Translates to: KLQPALCRKGRGQGREIVGGPGS*LGGIWL
Trigger: CAGCCAAATGCCTCCCAGGCAACTACCAGGACCACC...GACTATTTCCCTCCCCTGACCTCTGCCCTTTCTACATAAAGCAGGTTGGAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR GCA 90 bp AAACTGCACGTCATTCCTTGGACACATCTACCCTCTGAGACACTGGACACTTTGGGTGGTCCTGGTAGTTaGCTGGGAGGCATTTGGCTG +
Preference number: 4 (lower is better)
Translates to: KLHVIPWTHLPSETLDTLGGPGS*LGGIWL
Trigger: CAGCCAAATGCCTCCCAGGCAACTACCAGGACCACC...CAAAGTGTCCAGTGTCTCAGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR GCA 90 bp CAACCTGCTTTATGTAGAAAGGGCAGAGGTCAGGGGAGGGAAATAGTCAAAAACGCTCGCGGTACCGCTTaGCCACTTCCTCCATCTCCT +
Preference number: 4 (lower is better)
Translates to: QPALCRKGRGQGREIVKNARGTA*PLPPSP
Trigger: AGGAGATGGAGGAAGTGGGCAAGCGGTACCGCGAGC...GTTTTTGACTATTTCCCTCCCCTGACCTCTGCCCTTTCTACATAAAGCAGGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CCA 90 bp ACACATCTACCCTCTGAGACACTGGACACTTTGAGTCCAGAGGGAACTGGCCCCTCCTCTGGCTGCTCTTaGATATCTCTAGCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: THLPSETLDTLSPEGTGPSSGCS*ISLASR
Trigger: TCTGGAAGCTAGAGATATCCAAGAGCAGCCAGAGGA...GGGGCCAGTTCCCTCTGGACTCAAAGTGTCCAGTGTCTCAGAGGGTAGATGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CCA 90 bp GGGGAGGGAAATAGTCAAAAACTGCACGTCATTCCTTGGACACATCTACCCTCTGTCCTGGTAGTTGCCTaGGAGGCATTTGGCTGGGCA +
Preference number: 4 (lower is better)
Translates to: GEGNSQKLHVIPWTHLPSVLVVA*EAFGWA
Trigger: TGCCCAGCCAAATGCCTCCCAGGCAACTACCAGGAC...AGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATTTCCCTCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CCA 90 bp CAGGGGAGGGAAATAGTCAAAAACTGCACGTCATTCCTTGGACACATCTACCCTTCCCTGGTGATTCTCTaGTTCTCACCCTGGCCCACC +
Preference number: 4 (lower is better)
Translates to: QGREIVKNCTSFLGHIYPSLVIL*FSPWPT
Trigger: GGTGGGCCAGGGTGAGAACCAGAGAATCACCAGGGA...AGGGTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATTTCCCTCCCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CCA 90 bp AAACTGCACGTCATTCCTTGGACACATCTACCCTCTGAGACACTGGACACTTTGTCCCTGGTGATTCTCTaGTTCTCACCCTGGCCCACC +
Preference number: 4 (lower is better)
Translates to: KLHVIPWTHLPSETLDTLSLVIL*FSPWPT
Trigger: GGTGGGCCAGGGTGAGAACCAGAGAATCACCAGGGA...CAAAGTGTCCAGTGTCTCAGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CCA 90 bp AAACTCCAACCTGCTTTATGTAGAAAGGGCAGAGGTCAGGGGAGGGAAATAGTCTATCCCCGTGGATGGTaGACGGGAGGCAGTGCTCAT +
Preference number: 4 (lower is better)
Translates to: KLQPALCRKGRGQGREIVYPRGW*TGGSAH
Trigger: ATGAGCACTGCCTCCCGTCCACCATCCACGGGGATA...GACTATTTCCCTCCCCTGACCTCTGCCCTTTCTACATAAAGCAGGTTGGAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CCA 90 bp AAACTGCACGTCATTCCTTGGACACATCTACCCTCTGAGACACTGGACACTTTGTCATATCCCCGTGGATaGTGGACGGGAGGCAGTGCT +
Preference number: 4 (lower is better)
Translates to: KLHVIPWTHLPSETLDTLSYPRG*WTGGSA
Trigger: AGCACTGCCTCCCGTCCACCATCCACGGGGATATGA...CAAAGTGTCCAGTGTCTCAGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CCA 90 bp GAGGGAAATAGTCAAAAACTGCACGTCATTCCTTGGACACATCTACCCTCTGAGCTCCCGGCTGCCGGATaGGGCACACTTTGTCCATCT +
Preference number: 4 (lower is better)
Translates to: EGNSQKLHVIPWTHLPSELPAAG*GTLCPS
Trigger: AGATGGACAAAGTGTGCCCCATCCGGCAGCCGGGAG...CTCAGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATTTCCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CCA 90 bp CAACCTGCTTTATGTAGAAAGGGCAGAGGTCAGGGGAGGGAAATAGTCAAAAACAGGGTGGTAGGTGGCTaGGTAGACATGGGGCTGGTG +
Preference number: 4 (lower is better)
Translates to: QPALCRKGRGQGREIVKNRVVGG*VDMGLV
Trigger: CACCAGCCCCATGTCTACCCAGCCACCTACCACCCT...GTTTTTGACTATTTCCCTCCCCTGACCTCTGCCCTTTCTACATAAAGCAGGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CCA 90 bp GAGGGAAATAGTCAAAAACTGCACGTCATTCCTTGGACACATCTACCCTCTGAGGGTCAGGGTGGTAGGTaGCTGGGTAGACATGGGGCT +
Preference number: 4 (lower is better)
Translates to: EGNSQKLHVIPWTHLPSEGQGGR*LGRHGA
Trigger: AGCCCCATGTCTACCCAGCCACCTACCACCCTGACC...CTCAGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATTTCCCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR TCA 90 bp GAGGGAAATAGTCAAAAACTGCACGTCATTCCTTGGACACATCTACCCTCTGAGGGATTAAGGGGTGTCTaGTCCTCCTTGCGAGGCACC +
Preference number: 4 (lower is better)
Translates to: EGNSQKLHVIPWTHLPSEGLRGV*SSLRGT
Trigger: GGTGCCTCGCAAGGAGGATCAGACACCCCTTAATCC...CTCAGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATTTCCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR TCA 90 bp CAACCTGCTTTATGTAGAAAGGGCAGAGGTCAGGGGAGGGAAATAGTCAAAAACGGCTTTGGGGGAGCCTaGGGTTGGGATGCAGGATTA +
Preference number: 4 (lower is better)
Translates to: QPALCRKGRGQGREIVKNGFGGA*GWDAGL
Trigger: TAATCCTGCATCCCAACCTCAGGCTCCCCCAAAGCC...GTTTTTGACTATTTCCCTCCCCTGACCTCTGCCCTTTCTACATAAAGCAGGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR TCA 90 bp CAACCTGCTTTATGTAGAAAGGGCAGAGGTCAGGGGAGGGAAATAGTCAAAAACCCACCTCCTGCTTCTTaGGCGGACCCTTCAGGGAAT +
Preference number: 4 (lower is better)
Translates to: QPALCRKGRGQGREIVKNPPPAS*ADPSGN
Trigger: ATTCCCTGAAGGGTCCGCTCAAGAAGCAGGAGGTGG...GTTTTTGACTATTTCCCTCCCCTGACCTCTGCCCTTTCTACATAAAGCAGGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR TCA 90 bp AATAGTCAAAAACTGCACGTCATTCCTTGGACACATCTACCCTCTGAGACACTGTGCGGGCCGAGTCAATaGGCTCCCTCATATCCCCGT +
Preference number: 4 (lower is better)
Translates to: NSQKLHVIPWTHLPSETLCGPSQ*APSYPR
Trigger: ACGGGGATATGAGGGAGCTCATTGACTCGGCCCGCA...CAGTGTCTCAGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR TCA 90 bp GAGGGAAATAGTCAAAAACTGCACGTCATTCCTTGGACACATCTACCCTCTGAGGGTGTTGAACACAACTaGAGAGCGCCAGGCTCCGGT +
Preference number: 4 (lower is better)
Translates to: EGNSQKLHVIPWTHLPSEGVEHN*RAPGSG
Trigger: ACCGGAGCCTGGCGCTCTTCAGTTGTGTTCAACACC...CTCAGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATTTCCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR TCA 90 bp CAGGGGAGGGAAATAGTCAAAAACTGCACGTCATTCCTTGGACACATCTACCCTACATGGGGCTGGTGTTaGACACAACTGAAGAGCGCC +
Preference number: 4 (lower is better)
Translates to: QGREIVKNCTSFLGHIYPTWGWC*TQLKSA
Trigger: GGCGCTCTTCAGTTGTGTTCAACACCAGCCCCATGT...AGGGTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATTTCCCTCCCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR TCA 90 bp AAACTCCAACCTGCTTTATGTAGAAAGGGCAGAGGTCAGGGGAGGGAAATAGTCACATGGGGCTGGTGTTaGACACAACTGAAGAGCGCC +
Preference number: 4 (lower is better)
Translates to: KLQPALCRKGRGQGREIVTWGWC*TQLKSA
Trigger: GGCGCTCTTCAGTTGTGTTCAACACCAGCCCCATGT...GACTATTTCCCTCCCCTGACCTCTGCCCTTTCTACATAAAGCAGGTTGGAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR TCA 90 bp GGTCAGGGGAGGGAAATAGTCAAAAACTGCACGTCATTCCTTGGACACATCTACAGACACTGGACACTTTaGGTCCAGAGGGAACTGGCC +
Preference number: 4 (lower is better)
Translates to: GQGREIVKNCTSFLGHIYRHWTL*VQRELA
Trigger: GGCCAGTTCCCTCTGGACTCAAAGTGTCCAGTGTCT...GTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATTTCCCTCCCCTGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR GCA 90 bp TGTAGAAAGGGCAGAGGTCAGGGGAGGGAAATAGTCAAAAACTGCACGTCATTCCGTAACTCCAAGTCGTaGGAAAGGCGCTCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: CRKGRGQGREIVKNCTSFRNSKS*ERRSAQ
Trigger: CTGAGCTGAGCGCCTTTCGCACGACTTGGAGTTACG...GAATGACGTGCAGTTTTTGACTATTTCCCTCCCCTGACCTCTGCCCTTTCTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR GCA 90 bp GGGGAGGGAAATAGTCAAAAACTGCACGTCATTCCTTGGACACATCTACCCTCTGCTGAATCCACCTCCTaGTTCTTGAGCGGACCCTTC +
Preference number: 4 (lower is better)
Translates to: GEGNSQKLHVIPWTHLPSAESTS*FLSGPF
Trigger: GAAGGGTCCGCTCAAGAAGCAGGAGGTGGATTCAGC...AGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATTTCCCTCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR GCA 90 bp AAACTGCACGTCATTCCTTGGACACATCTACCCTCTGAGACACTGGACACTTTGGCTGAATCCACCTCCTaGTTCTTGAGCGGACCCTTC +
Preference number: 4 (lower is better)
Translates to: KLHVIPWTHLPSETLDTLAESTS*FLSGPF
Trigger: GAAGGGTCCGCTCAAGAAGCAGGAGGTGGATTCAGC...CAAAGTGTCCAGTGTCTCAGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR GCA 90 bp GGGGAGGGAAATAGTCAAAAACTGCACGTCATTCCTTGGACACATCTACCCTCTCAGTGCTCATCAAAGTaGCGATTCCCACAGCGCACC +
Preference number: 4 (lower is better)
Translates to: GEGNSQKLHVIPWTHLPSQCSSK*RFPQRT
Trigger: GGTGCGCTGTGGGAATCGGCACTTTGATGAGCACTG...AGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATTTCCCTCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR GCA 90 bp GAGAAAAACTCCAACCTGCTTTATGTAGAAAGGGCAGAGGTCAGGGGAGGGAAACAGTGCTCATCAAAGTaGCGATTCCCACAGCGCACC +
Preference number: 4 (lower is better)
Translates to: EKNSNLLYVERAEVRGGKQCSSK*RFPQRT
Trigger: GGTGCGCTGTGGGAATCGGCACTTTGATGAGCACTG...TTTCCCTCCCCTGACCTCTGCCCTTTCTACATAAAGCAGGTTGGAGTTTTTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR GCA 90 bp CAGGGGAGGGAAATAGTCAAAAACTGCACGTCATTCCTTGGACACATCTACCCTGTGGACGGGAGGCAGTaGTCATCAAAGTGCCGATTC +
Preference number: 4 (lower is better)
Translates to: QGREIVKNCTSFLGHIYPVDGRQ*SSKCRF
Trigger: GAATCGGCACTTTGATGAGCACTGCCTCCCGTCCAC...AGGGTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATTTCCCTCCCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CCA 90 bp AATAGTCAAAAACTGCACGTCATTCCTTGGACACATCTACCCTCTGAGACACTGTGGGAGGCATTTGGCTaGGCACTCTGCTCCTCGTGG +
Preference number: 4 (lower is better)
Translates to: NSQKLHVIPWTHLPSETLWEAFG*ALCSSW
Trigger: CCACGAGGAGCAGAGTGCCCAGCCAAATGCCTCCCA...CAGTGTCTCAGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CCA 90 bp TGTAGAAAGGGCAGAGGTCAGGGGAGGGAAATAGTCAAAAACTGCACGTCATTCAATGCTCCCTTGCAGTaGCCAGGCTGCTCCTTTGCT +
Preference number: 4 (lower is better)
Translates to: CRKGRGQGREIVKNCTSFNAPLQ*PGCSFA
Trigger: AGCAAAGGAGCAGCCTGGCCACTGCAAGGGAGCATT...GAATGACGTGCAGTTTTTGACTATTTCCCTCCCCTGACCTCTGCCCTTTCTACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CCA 90 bp GAGAAAAACTCCAACCTGCTTTATGTAGAAAGGGCAGAGGTCAGGGGAGGGAAACATTGCTCCGTGTACTaGATGGAGGGGATCGTGAGC +
Preference number: 4 (lower is better)
Translates to: EKNSNLLYVERAEVRGGKHCSVY*MEGIVS
Trigger: GCTCACGATCCCCTCCATCCAGTACACGGAGCAATG...TTTCCCTCCCCTGACCTCTGCCCTTTCTACATAAAGCAGGTTGGAGTTTTTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CCA 90 bp CAACCTGCTTTATGTAGAAAGGGCAGAGGTCAGGGGAGGGAAATAGTCAAAAACTATCCCCGTGGATGGTaGACGGGAGGCAGTGCTCAT +
Preference number: 4 (lower is better)
Translates to: QPALCRKGRGQGREIVKNYPRGW*TGGSAH
Trigger: ATGAGCACTGCCTCCCGTCCACCATCCACGGGGATA...GTTTTTGACTATTTCCCTCCCCTGACCTCTGCCCTTTCTACATAAAGCAGGTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CCA 90 bp CAGGGGAGGGAAATAGTCAAAAACTGCACGTCATTCCTTGGACACATCTACCCTCCGGCCAGAAGGAATTaGGGTGTGTTTGCTGCAGAC +
Preference number: 4 (lower is better)
Translates to: QGREIVKNCTSFLGHIYPPARRN*GVFAAD
Trigger: GTCTGCAGCAAACACACCCCAATTCCTTCTGGCCGG...AGGGTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATTTCCCTCCCCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CCA 90 bp AATAGTCAAAAACTGCACGTCATTCCTTGGACACATCTACCCTCTGAGACACTGGGTCTGTGGCCACAGTaGGCAGGTAGAGCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: NSQKLHVIPWTHLPSETLGLWPQ*AGRAAA
Trigger: AGCTGCAGCTCTACCTGCCCACTGTGGCCACAGACC...CAGTGTCTCAGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR TCA 90 bp CAGGGGAGGGAAATAGTCAAAAACTGCACGTCATTCCTTGGACACATCTACCCTACAGCAAGGCTTTCATaGGGATGTCCTCTGTCAGCG +
Preference number: 4 (lower is better)
Translates to: QGREIVKNCTSFLGHIYPTARLS*GCPLSA
Trigger: CGCTGACAGAGGACATCCTCATGAAAGCCTTGCTGT...AGGGTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATTTCCCTCCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR TCA 90 bp AAACTGCACGTCATTCCTTGGACACATCTACCCTCTGAGACACTGGACACTTTGCTGGCTAGCTCTAGTTaGTGTAGTACACCTTGGCGG +
Preference number: 4 (lower is better)
Translates to: KLHVIPWTHLPSETLDTLLASSS*CSTPWR
Trigger: CCGCCAAGGTGTACTACATCAACTAGAGCTAGCCAG...CAAAGTGTCCAGTGTCTCAGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR TCA 90 bp GAGGGAAATAGTCAAAAACTGCACGTCATTCCTTGGACACATCTACCCTCTGAGAGACACTGGACACTTTaGGTCCAGAGGGAACTGGCC +
Preference number: 4 (lower is better)
Translates to: EGNSQKLHVIPWTHLPSERHWTL*VQRELA
Trigger: GGCCAGTTCCCTCTGGACTCAAAGTGTCCAGTGTCT...CTCAGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATTTCCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR GCA 90 bp TGTAGAAAGGGCAGAGGTCAGGGGAGGGAAATAGTCAAAAACTGCACGTCATTCAGGCGGAAGTCCTTCTaGTGGAACTGCTTGAAGCAG +
Preference number: 4 (lower is better)
Translates to: CRKGRGQGREIVKNCTSFRRKSF*WNCLKQ
Trigger: CTGCTTCAAGCAGTTCCAGCAGAAGGACTTCCGCCT...GAATGACGTGCAGTTTTTGACTATTTCCCTCCCCTGACCTCTGCCCTTTCTACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR GCA 90 bp AAACTGCACGTCATTCCTTGGACACATCTACCCTCTGAGACACTGGACACTTTGAGCCTGAGGTTGGGATaGAGGATTAAGGGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: KLHVIPWTHLPSETLDTLSLRLG*RIKGCL
Trigger: CAGACACCCCTTAATCCTGCATCCCAACCTCAGGCT...CAAAGTGTCCAGTGTCTCAGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR GCA 90 bp AAACTGCACGTCATTCCTTGGACACATCTACCCTCTGAGACACTGGACACTTTGTTTGGCTGGGCACTCTaGTCCTCGTGGATCATGTGT +
Preference number: 4 (lower is better)
Translates to: KLHVIPWTHLPSETLDTLFGWAL*SSWIMC
Trigger: ACACATGATCCACGAGGAGCAGAGTGCCCAGCCAAA...CAAAGTGTCCAGTGTCTCAGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR GCA 90 bp CAGGGGAGGGAAATAGTCAAAAACTGCACGTCATTCCTTGGACACATCTACCCTGATATAATGCTCCCTTaGAGTGGCCAGGCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: QGREIVKNCTSFLGHIYPDIMLP*SGQAAP
Trigger: AGGAGCAGCCTGGCCACTGCAAGGGAGCATTATATC...AGGGTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATTTCCCTCCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR GCA 90 bp TGTAGAAAGGGCAGAGGTCAGGGGAGGGAAATAGTCAAAAACTGCACGTCATTCTTGGGGTGTGTTTGCTaGAGACCACTGGACCTCTTC +
Preference number: 4 (lower is better)
Translates to: CRKGRGQGREIVKNCTSFLGCVC*RPLDLF
Trigger: GAAGAGGTCCAGTGGTCTGCAGCAAACACACCCCAA...GAATGACGTGCAGTTTTTGACTATTTCCCTCCCCTGACCTCTGCCCTTTCTACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR GCA 90 bp AAACTCCAACCTGCTTTATGTAGAAAGGGCAGAGGTCAGGGGAGGGAAATAGTCGAATTGGGGTGTGTTTaGTGCAGACCACTGGACCTC +
Preference number: 4 (lower is better)
Translates to: KLQPALCRKGRGQGREIVELGCV*CRPLDL
Trigger: GAGGTCCAGTGGTCTGCAGCAAACACACCCCAATTC...GACTATTTCCCTCCCCTGACCTCTGCCCTTTCTACATAAAGCAGGTTGGAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CCA 90 bp AAACTGCACGTCATTCCTTGGACACATCTACCCTCTGAGACACTGGACACTTTGGAATGTGTGTCGATGTaGGCTTGCTTGCGTAGGGGT +
Preference number: 4 (lower is better)
Translates to: KLHVIPWTHLPSETLDTLECVSM*ACLRRG
Trigger: ACCCCTACGCAAGCAAGCCCACATCGACACACATTC...CAAAGTGTCCAGTGTCTCAGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CCA 90 bp AAACTCCAACCTGCTTTATGTAGAAAGGGCAGAGGTCAGGGGAGGGAAATAGTCCGGAAGTCCTTCTGCTaGAACTGCTTGAAGCAGTGG +
Preference number: 4 (lower is better)
Translates to: KLQPALCRKGRGQGREIVRKSFC*NCLKQW
Trigger: CCACTGCTTCAAGCAGTTCCAGCAGAAGGACTTCCG...GACTATTTCCCTCCCCTGACCTCTGCCCTTTCTACATAAAGCAGGTTGGAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CCA 90 bp GAGGGAAATAGTCAAAAACTGCACGTCATTCCTTGGACACATCTACCCTCTGAGCATTGCTCCGTGTACTaGATGGAGGGGATCGTGAGC +
Preference number: 4 (lower is better)
Translates to: EGNSQKLHVIPWTHLPSEHCSVY*MEGIVS
Trigger: GCTCACGATCCCCTCCATCCAGTACACGGAGCAATG...CTCAGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATTTCCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CCA 90 bp AATAGTCAAAAACTGCACGTCATTCCTTGGACACATCTACCCTCTGAGACACTGTCATATCCCCGTGGATaGTGGACGGGAGGCAGTGCT +
Preference number: 4 (lower is better)
Translates to: NSQKLHVIPWTHLPSETLSYPRG*WTGGSA
Trigger: AGCACTGCCTCCCGTCCACCATCCACGGGGATATGA...CAGTGTCTCAGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CCA 90 bp GAGGGAAATAGTCAAAAACTGCACGTCATTCCTTGGACACATCTACCCTCTGAGCCGGCCAGAAGGAATTaGGGTGTGTTTGCTGCAGAC +
Preference number: 4 (lower is better)
Translates to: EGNSQKLHVIPWTHLPSEPARRN*GVFAAD
Trigger: GTCTGCAGCAAACACACCCCAATTCCTTCTGGCCGG...CTCAGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATTTCCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CCA 90 bp AAACTCCAACCTGCTTTATGTAGAAAGGGCAGAGGTCAGGGGAGGGAAATAGTCGGGTCCGGCAACACCTaGCTAGCTCTAGTTGATGTA +
Preference number: 4 (lower is better)
Translates to: KLQPALCRKGRGQGREIVGSGNT*LALVDV
Trigger: TACATCAACTAGAGCTAGCCAGGTGTTGCCGGACCC...GACTATTTCCCTCCCCTGACCTCTGCCCTTTCTACATAAAGCAGGTTGGAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR TCA 90 bp GAGAAAAACTCCAACCTGCTTTATGTAGAAAGGGCAGAGGTCAGGGGAGGGAAACCAGGATATCCATGGTaGTGGTGTTGTGCTTCCCAA +
Preference number: 4 (lower is better)
Translates to: EKNSNLLYVERAEVRGGKPGYPW*WCCASQ
Trigger: TTGGGAAGCACAACACCATCACCATGGATATCCTGG...TTTCCCTCCCCTGACCTCTGCCCTTTCTACATAAAGCAGGTTGGAGTTTTTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR TCA 90 bp TGTAGAAAGGGCAGAGGTCAGGGGAGGGAAATAGTCAAAAACTGCACGTCATTCAGCTTATCCAGAAGATaGCCCGGCCAGAAGGAATTG +
Preference number: 4 (lower is better)
Translates to: CRKGRGQGREIVKNCTSFSLSRR*PGQKEL
Trigger: CAATTCCTTCTGGCCGGGTCATCTTCTGGATAAGCT...GAATGACGTGCAGTTTTTGACTATTTCCCTCCCCTGACCTCTGCCCTTTCTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR GCA 90 bp GAAATAGTCAAAAACTGCACGTCATTCCTTGGACACATCTACCCTCTGAGACACCGTAACTCCAAGTCGTaGGAAAGGCGCTCAGCTCAG +
Preference number: 4 (lower is better)
Translates to: EIVKNCTSFLGHIYPLRHRNSKS*ERRSAQ
Trigger: CTGAGCTGAGCGCCTTTCGCACGACTTGGAGTTACG...GTGTCTCAGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR GCA 90 bp GGGGAGGGAAATAGTCAAAAACTGCACGTCATTCCTTGGACACATCTACCCTCTTCCTTCTGCTGGAACTaGTTGAAGCAGTGGGCAATG +
Preference number: 4 (lower is better)
Translates to: GEGNSQKLHVIPWTHLPSSFCWN*LKQWAM
Trigger: CATTGCCCACTGCTTCAAGCAGTTCCAGCAGAAGGA...AGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATTTCCCTCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR GCA 90 bp AAACTGCACGTCATTCCTTGGACACATCTACCCTCTGAGACACTGGACACTTTGTCCTTCTGCTGGAACTaGTTGAAGCAGTGGGCAATG +
Preference number: 4 (lower is better)
Translates to: KLHVIPWTHLPSETLDTLSFCWN*LKQWAM
Trigger: CATTGCCCACTGCTTCAAGCAGTTCCAGCAGAAGGA...CAAAGTGTCCAGTGTCTCAGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR GCA 90 bp CAACCTGCTTTATGTAGAAAGGGCAGAGGTCAGGGGAGGGAAATAGTCAAAAACAGGCGGAAGTCCTTCTaGTGGAACTGCTTGAAGCAG +
Preference number: 4 (lower is better)
Translates to: QPALCRKGRGQGREIVKNRRKSF*WNCLKQ
Trigger: CTGCTTCAAGCAGTTCCAGCAGAAGGACTTCCGCCT...GTTTTTGACTATTTCCCTCCCCTGACCTCTGCCCTTTCTACATAAAGCAGGTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR GCA 90 bp GAGAAAAACTCCAACCTGCTTTATGTAGAAAGGGCAGAGGTCAGGGGAGGGAAAATGGTGATGGTGTTGTaGTTCCCAAGAGAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: EKNSNLLYVERAEVRGGKMVMVL*FPRELR
Trigger: CCTCAGCTCTCTTGGGAAGCACAACACCATCACCAT...TTTCCCTCCCCTGACCTCTGCCCTTTCTACATAAAGCAGGTTGGAGTTTTTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR GCA 90 bp GGGGAGGGAAATAGTCAAAAACTGCACGTCATTCCTTGGACACATCTACCCTCTATGGTGATGGTGTTGTaGTTCCCAAGAGAGCTGAGG +
Preference number: 4 (lower is better)
Translates to: GEGNSQKLHVIPWTHLPSMVMVL*FPRELR
Trigger: CCTCAGCTCTCTTGGGAAGCACAACACCATCACCAT...AGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATTTCCCTCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CCA 90 bp GTCAAAAACTGCACGTCATTCCTTGGACACATCTACCCTCTGAGACACTGGACAAACTGCTTGAAGCAGTaGGCAATGACCGGTTCAGGA +
Preference number: 4 (lower is better)
Translates to: VKNCTSFLGHIYPLRHWTNCLKQ*AMTGSG
Trigger: TCCTGAACCGGTCATTGCCCACTGCTTCAAGCAGTT...TGTCCAGTGTCTCAGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CCA 90 bp AATGAGAAAAACTCCAACCTGCTTTATGTAGAAAGGGCAGAGGTCAGGGGAGGGGCACTCTGCTCCTCGTaGATCATGTGTAAGACCTTG +
Preference number: 4 (lower is better)
Translates to: NEKNSNLLYVERAEVRGGALCSS*IMCKTL
Trigger: CAAGGTCTTACACATGATCCACGAGGAGCAGAGTGC...CCCTCCCCTGACCTCTGCCCTTTCTACATAAAGCAGGTTGGAGTTTTTCTCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CCA 90 bp GAGAAAAACTCCAACCTGCTTTATGTAGAAAGGGCAGAGGTCAGGGGAGGGAAAGCACTCTGCTCCTCGTaGATCATGTGTAAGACCTTG +
Preference number: 4 (lower is better)
Translates to: EKNSNLLYVERAEVRGGKALCSS*IMCKTL
Trigger: CAAGGTCTTACACATGATCCACGAGGAGCAGAGTGC...TTTCCCTCCCCTGACCTCTGCCCTTTCTACATAAAGCAGGTTGGAGTTTTTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CCA 90 bp GGGGAGGGAAATAGTCAAAAACTGCACGTCATTCCTTGGACACATCTACCCTCTTTTGCTGCAGACCACTaGACCTCTTCACCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: GEGNSQKLHVIPWTHLPSFAADH*TSSPSA
Trigger: AGCTGAAGGTGAAGAGGTCCAGTGGTCTGCAGCAAA...AGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATTTCCCTCCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CCA 90 bp AAACTGCACGTCATTCCTTGGACACATCTACCCTCTGAGACACTGGACACTTTGCTGCACGTCATTCCTTaGACACATCTACCCTCTGAG +
Preference number: 4 (lower is better)
Translates to: KLHVIPWTHLPSETLDTLLHVIP*THLPSE
Trigger: CTCAGAGGGTAGATGTGTCCAAGGAATGACGTGCAG...CAAAGTGTCCAGTGTCTCAGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CCA 90 bp GGTCAGGGGAGGGAAATAGTCAAAAACTGCACGTCATTCCTTGGACACATCTACCTGCACGTCATTCCTTaGACACATCTACCCTCTGAG +
Preference number: 4 (lower is better)
Translates to: GQGREIVKNCTSFLGHIYLHVIP*THLPSE
Trigger: CTCAGAGGGTAGATGTGTCCAAGGAATGACGTGCAG...GTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATTTCCCTCCCCTGACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR TCA 90 bp GGTCAGGGGAGGGAAATAGTCAAAAACTGCACGTCATTCCTTGGACACATCTACATATCTCCAGGATCTTaGTCTTGCGGCTATGCAGGT +
Preference number: 4 (lower is better)
Translates to: GQGREIVKNCTSFLGHIYISPGS*SCGYAG
Trigger: ACCTGCATAGCCGCAAGATCAAGATCCTGGAGATAT...GTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATTTCCCTCCCCTGACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR TCA 90 bp GAGAAAAACTCCAACCTGCTTTATGTAGAAAGGGCAGAGGTCAGGGGAGGGAAAGCTTCCCAAGAGAGCTaGGGTAGATCACTATATCCT +
Preference number: 4 (lower is better)
Translates to: EKNSNLLYVERAEVRGGKASQES*GRSLYP
Trigger: AGGATATAGTGATCTACCTCAGCTCTCTTGGGAAGC...TTTCCCTCCCCTGACCTCTGCCCTTTCTACATAAAGCAGGTTGGAGTTTTTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR TCA 90 bp CAACCTGCTTTATGTAGAAAGGGCAGAGGTCAGGGGAGGGAAATAGTCAAAAACCCAGGATATCCATGGTaGTGGTGTTGTGCTTCCCAA +
Preference number: 4 (lower is better)
Translates to: QPALCRKGRGQGREIVKNPGYPW*WCCASQ
Trigger: TTGGGAAGCACAACACCATCACCATGGATATCCTGG...GTTTTTGACTATTTCCCTCCCCTGACCTCTGCCCTTTCTACATAAAGCAGGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR TCA 90 bp AATAGTCAAAAACTGCACGTCATTCCTTGGACACATCTACCCTCTGAGACACTGACAGCAAGGCTTTCATaGGGATGTCCTCTGTCAGCG +
Preference number: 4 (lower is better)
Translates to: NSQKLHVIPWTHLPSETLTARLS*GCPLSA
Trigger: CGCTGACAGAGGACATCCTCATGAAAGCCTTGCTGT...CAGTGTCTCAGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR GCA 90 bp AATAGTCAAAAACTGCACGTCATTCCTTGGACACATCTACCCTCTGAGACACTGAGCCTGAGGTTGGGATaGAGGATTAAGGGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: NSQKLHVIPWTHLPSETLSLRLG*RIKGCL
Trigger: CAGACACCCCTTAATCCTGCATCCCAACCTCAGGCT...CAGTGTCTCAGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR GCA 90 bp GGGGAGGGAAATAGTCAAAAACTGCACGTCATTCCTTGGACACATCTACCCTCTTTCCTGTCCTCTGGCTaGTCTTGGATATCTCTAGCT +
Preference number: 4 (lower is better)
Translates to: GEGNSQKLHVIPWTHLPSFLSSG*SWISLA
Trigger: AGCTAGAGATATCCAAGAGCAGCCAGAGGACAGGAA...AGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATTTCCCTCCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR GCA 90 bp AATGAGAAAAACTCCAACCTGCTTTATGTAGAAAGGGCAGAGGTCAGGGGAGGGTTCCTGTCCTCTGGCTaGTCTTGGATATCTCTAGCT +
Preference number: 4 (lower is better)
Translates to: NEKNSNLLYVERAEVRGGFLSSG*SWISLA
Trigger: AGCTAGAGATATCCAAGAGCAGCCAGAGGACAGGAA...CCCTCCCCTGACCTCTGCCCTTTCTACATAAAGCAGGTTGGAGTTTTTCTCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR GCA 90 bp AATAGTCAAAAACTGCACGTCATTCCTTGGACACATCTACCCTCTGAGACACTGTTTGGCTGGGCACTCTaGTCCTCGTGGATCATGTGT +
Preference number: 4 (lower is better)
Translates to: NSQKLHVIPWTHLPSETLFGWAL*SSWIMC
Trigger: ACACATGATCCACGAGGAGCAGAGTGCCCAGCCAAA...CAGTGTCTCAGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR GCA 90 bp GAAATAGTCAAAAACTGCACGTCATTCCTTGGACACATCTACCCTCTGAGACACGATATAATGCTCCCTTaGAGTGGCCAGGCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: EIVKNCTSFLGHIYPLRHDIMLP*SGQAAP
Trigger: AGGAGCAGCCTGGCCACTGCAAGGGAGCATTATATC...GTGTCTCAGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CCA 90 bp GAGGGAAATAGTCAAAAACTGCACGTCATTCCTTGGACACATCTACCCTCTGAGAACTGCTTGAAGCAGTaGGCAATGACCGGTTCAGGA +
Preference number: 4 (lower is better)
Translates to: EGNSQKLHVIPWTHLPSENCLKQ*AMTGSG
Trigger: TCCTGAACCGGTCATTGCCCACTGCTTCAAGCAGTT...CTCAGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATTTCCCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CCA 90 bp AATGAGAAAAACTCCAACCTGCTTTATGTAGAAAGGGCAGAGGTCAGGGGAGGGTCCTCTGGCTGCTCTTaGATATCTCTAGCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: NEKNSNLLYVERAEVRGGSSGCS*ISLASR
Trigger: TCTGGAAGCTAGAGATATCCAAGAGCAGCCAGAGGA...CCCTCCCCTGACCTCTGCCCTTTCTACATAAAGCAGGTTGGAGTTTTTCTCATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CCA 90 bp GTCAAAAACTGCACGTCATTCCTTGGACACATCTACCCTCTGAGACACTGGACAGGGAATCTCTGTGCTTaGCCAAGATATAATGCTCCC +
Preference number: 4 (lower is better)
Translates to: VKNCTSFLGHIYPLRHWTGNLCA*PRYNAP
Trigger: GGGAGCATTATATCTTGGCCAAGCACAGAGATTCCC...TGTCCAGTGTCTCAGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CCA 90 bp CAACCTGCTTTATGTAGAAAGGGCAGAGGTCAGGGGAGGGAAATAGTCAAAAACTTTGCTGCAGACCACTaGACCTCTTCACCTTCAGCT +
Preference number: 4 (lower is better)
Translates to: QPALCRKGRGQGREIVKNFAADH*TSSPSA
Trigger: AGCTGAAGGTGAAGAGGTCCAGTGGTCTGCAGCAAA...GTTTTTGACTATTTCCCTCCCCTGACCTCTGCCCTTTCTACATAAAGCAGGTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR TCA 90 bp CAACCTGCTTTATGTAGAAAGGGCAGAGGTCAGGGGAGGGAAATAGTCAAAAACGCTTCCCAAGAGAGCTaGGGTAGATCACTATATCCT +
Preference number: 4 (lower is better)
Translates to: QPALCRKGRGQGREIVKNASQES*GRSLYP
Trigger: AGGATATAGTGATCTACCTCAGCTCTCTTGGGAAGC...GTTTTTGACTATTTCCCTCCCCTGACCTCTGCCCTTTCTACATAAAGCAGGTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR TCA 90 bp AATGAGAAAAACTCCAACCTGCTTTATGTAGAAAGGGCAGAGGTCAGGGGAGGGTGTCCATCTGGAAAATaGTCTTGTCTCCTGGGTACA +
Preference number: 4 (lower is better)
Translates to: NEKNSNLLYVERAEVRGGCPSGK*SCLLGT
Trigger: TGTACCCAGGAGACAAGATCATTTTCCAGATGGACA...CCCTCCCCTGACCTCTGCCCTTTCTACATAAAGCAGGTTGGAGTTTTTCTCATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR TCA 90 bp AAACTGCACGTCATTCCTTGGACACATCTACCCTCTGAGACACTGGACACTTTGTGTCCATCTGGAAAATaGTCTTGTCTCCTGGGTACA +
Preference number: 4 (lower is better)
Translates to: KLHVIPWTHLPSETLDTLCPSGK*SCLLGT
Trigger: TGTACCCAGGAGACAAGATCATTTTCCAGATGGACA...CAAAGTGTCCAGTGTCTCAGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR TCA 90 bp AATAGTCAAAAACTGCACGTCATTCCTTGGACACATCTACCCTCTGAGACACTGAGCTTATCCAGAAGATaGCCCGGCCAGAAGGAATTG +
Preference number: 4 (lower is better)
Translates to: NSQKLHVIPWTHLPSETLSLSRR*PGQKEL
Trigger: CAATTCCTTCTGGCCGGGTCATCTTCTGGATAAGCT...CAGTGTCTCAGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR TCA 90 bp AATAGTCAAAAACTGCACGTCATTCCTTGGACACATCTACCCTCTGAGACACTGGACACATCTACCCTCTaGGACACTGGACACTTTGAG +
Preference number: 4 (lower is better)
Translates to: NSQKLHVIPWTHLPSETLDTSTL*DTGHFE
Trigger: CTCAAAGTGTCCAGTGTCTCAGAGGGTAGATGTGTC...CAGTGTCTCAGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR TCA 90 bp AAACTGCACGTCATTCCTTGGACACATCTACCCTCTGAGACACTGGACACTTTGTTTAGTTTGACTCTTTaGCACTCCTCTTGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: KLHVIPWTHLPSETLDTLFSLTL*HSSCVW
Trigger: CCAGACACAAGAGGAGTGTCAAAGAGTCAAACTAAA...CAAAGTGTCCAGTGTCTCAGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CCA 90 bp GAAATAGTCAAAAACTGCACGTCATTCCTTGGACACATCTACCCTCTGAGACACGGGAATCTCTGTGCTTaGCCAAGATATAATGCTCCC +
Preference number: 4 (lower is better)
Translates to: EIVKNCTSFLGHIYPLRHGNLCA*PRYNAP
Trigger: GGGAGCATTATATCTTGGCCAAGCACAGAGATTCCC...GTGTCTCAGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CCA 90 bp CAGGGGAGGGAAATAGTCAAAAACTGCACGTCATTCCTTGGACACATCTACCCTAATGATCTTGTCTCCTaGGTACAGCAAGGCTTTCAT +
Preference number: 4 (lower is better)
Translates to: QGREIVKNCTSFLGHIYPNDLVS*VQQGFH
Trigger: ATGAAAGCCTTGCTGTACCCAGGAGACAAGATCATT...AGGGTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATTTCCCTCCCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CCA 90 bp AAACTCCAACCTGCTTTATGTAGAAAGGGCAGAGGTCAGGGGAGGGAAATAGTCAATGATCTTGTCTCCTaGGTACAGCAAGGCTTTCAT +
Preference number: 4 (lower is better)
Translates to: KLQPALCRKGRGQGREIVNDLVS*VQQGFH
Trigger: ATGAAAGCCTTGCTGTACCCAGGAGACAAGATCATT...GACTATTTCCCTCCCCTGACCTCTGCCCTTTCTACATAAAGCAGGTTGGAGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR TCA 90 bp GAGGGAAATAGTCAAAAACTGCACGTCATTCCTTGGACACATCTACCCTCTGAGTTTAGTTTGACTCTTTaGCACTCCTCTTGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: EGNSQKLHVIPWTHLPSEFSLTL*HSSCVW
Trigger: CCAGACACAAGAGGAGTGTCAAAGAGTCAAACTAAA...CTCAGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATTTCCCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR GCA 90 bp GAGAAAAACTCCAACCTGCTTTATGTAGAAAGGGCAGAGGTCAGGGGAGGGAAAGAAATAGTCAAAAACTaGACGTCATTCCTTGGACAC +
Preference number: 4 (lower is better)
Translates to: EKNSNLLYVERAEVRGGKEIVKN*TSFLGH
Trigger: GTGTCCAAGGAATGACGTGCAGTTTTTGACTATTTC...TTTCCCTCCCCTGACCTCTGCCCTTTCTACATAAAGCAGGTTGGAGTTTTTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CCA 90 bp AAACTGCACGTCATTCCTTGGACACATCTACCCTCTGAGACACTGGACACTTTGCACACTTTGTCCATCTaGAAAATGATCTTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: KLHVIPWTHLPSETLDTLHTLSI*KMILSP
Trigger: AGGAGACAAGATCATTTTCCAGATGGACAAAGTGTG...CAAAGTGTCCAGTGTCTCAGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CCA 90 bp CAACCTGCTTTATGTAGAAAGGGCAGAGGTCAGGGGAGGGAAATAGTCAAAAACCACACTTTGTCCATCTaGAAAATGATCTTGTCTCCT +
Preference number: 4 (lower is better)
Translates to: QPALCRKGRGQGREIVKNHTLSI*KMILSP
Trigger: AGGAGACAAGATCATTTTCCAGATGGACAAAGTGTG...GTTTTTGACTATTTCCCTCCCCTGACCTCTGCCCTTTCTACATAAAGCAGGTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR GCA 90 bp AATAGTCAAAAACTGCACGTCATTCCTTGGACACATCTACCCTCTGAGACACTGGAAATAGTCAAAAACTaGACGTCATTCCTTGGACAC +
Preference number: 4 (lower is better)
Translates to: NSQKLHVIPWTHLPSETLEIVKN*TSFLGH
Trigger: GTGTCCAAGGAATGACGTGCAGTTTTTGACTATTTC...CAGTGTCTCAGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS CCA 90 bp GGGCCCTGCTGTGTCCCACTGCAGGCATTCTGGCCACACACCCAGTaGGCAGCTGGCAGGGGTCTAGAAGCAGGGGCAGGTCCAGGCCCC +
Preference number: 5 (lower is better)
Translates to: GPCCVPLQAFWPHTQ*AAGRGLEAGAGPGP
Trigger: GGGGCCTGGACCTGCCCCTGCTTCTAGACCCCTGCCAGCTGCCCACTGGGTGTGTGGCCAGAATGCCTGCAGTGGGACACAGCAGGGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514900.5
CDS CCA 90 bp CCTGCACCATGCTTGCTCCCAGGACGGGGAGGTGGAGGCACAGGATaGGGAGGGGTACGCACGCTCCCTTGCAGTGGCCAGGCTGCTCCT +
Preference number: 5 (lower is better)
Translates to: PAPCLLPGRGGGGTG*GGVRTLPCSGQAAP
Trigger: AGGAGCAGCCTGGCCACTGCAAGGGAGCGTGCGTACCCCTCCCCATCCTGTGCCTCCACCTCCCCGTCCTGGGAGCAAGCATGGTGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS GCA 90 bp ATGGTATCCGGCCAGCTGGGCTCTCCTCCTCCCATGCCGCGCCCCTaGCTCTGCAGGGATGCTGCCTTGTTCCTCTGCAGTCACCCACGG +
Preference number: 5 (lower is better)
Translates to: MVSGQLGSPPPMPRP*LCRDAALFLCSHPR
Trigger: CCGTGGGTGACTGCAGAGGAACAAGGCAGCATCCCTGCAGAGGCAGGGGCGCGGCATGGGAGGAGGAGAGCCCAGCTGGCCGGATACCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514900.5
CDS CCA 90 bp GCTCGCGGTACCGCTTGCCCACTTCCTCCATCTCCTCCAGGGTCATaGGCCGCGTCTCCATCTGCGTGTCGACTGCAGGCACCGTCAGTA +
Preference number: 5 (lower is better)
Translates to: ARGTACPLPPSPPGS*AASPSACRLQAPSV
Trigger: TACTGACGGTGCCTGCAGTCGACACGCAGATGGAGACGCGGCCCATGACCCTGGAGGAGATGGAGGAAGTGGGCAAGCGGTACCGCGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326085.7
ENST00000503498.1
ENST00000505956.6
ENST00000514900.5
CDS GCA 90 bp GGGGCTGGAAGGAAGTCACAGCCCGTGTCATGGCCAGGACCCACCTaGAGGCCTGGGCCTACTCCTGCACTTGAAGATGCCCCAACCAGA +
Preference number: 5 (lower is better)
Translates to: GAGRKSQPVSWPGPT*RPGPTPALEDAPTR
Trigger: TCTGGTTGGGGCATCTTCAAGTGCAGGAGTAGGCCCAGGCCTGCAGGTGGGTCCTGGCCATGACACGGGCTGTGACTTCCTTCCAGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514900.5
CDS TCA 90 bp CCTGAGACATGCGCCAAGGGTGACCCGGGACTGGCCAGTCTGCAGTaGGCAGTCAGGTTGGGGGATGTTGCCCTAGGATGCAGACGCAAG +
Preference number: 5 (lower is better)
Translates to: PETCAKGDPGLASLQ*AVRLGDVALGCRRK
Trigger: CTTGCGTCTGCATCCTAGGGCAACATCCCCCAACCTGACTGCTCACTGCAGACTGGCCAGTCCCGGGTCACCCTTGGCGCATGTCTCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514900.5
CDS GCA 90 bp CCCACTTCCTCCATCTCCTCCAGGGTCATGGGCCGCGTCTCCATCTaGGTGTCGACTGCAGGCACCGTCAGTAGGTCCACTTTGGGAAGC +
Preference number: 5 (lower is better)
Translates to: PTSSISSRVMGRVSI*VSTAGTVSRSTLGS
Trigger: GCTTCCCAAAGTGGACCTACTGACGGTGCCTGCAGTCGACACGCAGATGGAGACGCGGCCCATGACCCTGGAGGAGATGGAGGAAGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326085.7
ENST00000503498.1
ENST00000505956.6
ENST00000514900.5
CDS CCA 90 bp GAGAAAGGGCTGCCCCCTGTTCTCTGCAGGGCCCTGACACCTGGCTaGGGATTTGTGAAGGCCCTCGCTCCAGCCCTGTTCTCTAAGGAG +
Preference number: 5 (lower is better)
Translates to: EKGLPPVLCRALTPG*GFVKALAPALFSKE
Trigger: CTCCTTAGAGAACAGGGCTGGAGCGAGGGCCTTCACAAATCCCCAGCCAGGTGTCAGGGCCCTGCAGAGAACAGGGGGCAGCCCTTTCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514900.5
CDS-3UTR CAA 90 bp CCCTCTGAGACACTGGACACTTTGAGTCCAGAGGGAACTGGCCCCCGGTCCATCTCAGTCCTCTTAGACTaGCCAGGGCCCTGGGACCGG +
Preference number: 5 (lower is better)
Translates to: PSETLDTLSPEGTGPRSISVLLD*PGPWDR
Trigger: CCGGTCCCAGGGCCCTGGCAAGTCTAAGAGGACTGA...GATGGACCGGGGGCCAGTTCCCTCTGGACTCAAAGTGTCCAGTGTCTCAGAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS GCA 90 bp GAGATGAAGGAAGGAGGGACTAAGAGGGTGCCCAGCCACGGAACCTaGCAAGCAGTTATCCAGTGTCACCCAGCAGGCACCAGGCCACCC +
Preference number: 5 (lower is better)
Translates to: EMKEGGTKRVPSHGT*QAVIQCHPAGTRPP
Trigger: GGGTGGCCTGGTGCCTGCTGGGTGACACTGGATAACTGCTTGGCAGGTTCCGTGGCTGGGCACCCTCTTAGTCCCTCCTTCCTTCATCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS CCA 90 bp CGGGAGAGCCTGGGGGCTTTCTTCCTGGTGGTCCTGGTAGTTGCCTaGGAGGCATTTGGCTGGGCACTCTGCTCCTCGTGGATCATGTGT +
Preference number: 5 (lower is better)
Translates to: RESLGAFFLVVLVVA*EAFGWALCSSWIMC
Trigger: ACACATGATCCACGAGGAGCAGAGTGCCCAGCCAAATGCCTCCCAGGCAACTACCAGGACCACCAGGAAGAAAGCCCCCAGGCTCTCCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326085.7
ENST00000503498.1
ENST00000505956.6
CDS-3UTR CAA 90 bp CCCTCTGAGACACTGGACACTTTGAGTCCAGAGGGAACTGGCCCCCGGTCCATCTTGCCTGGGAGGCATTaGGCTGGGCACTCTGCTCCT +
Preference number: 5 (lower is better)
Translates to: PSETLDTLSPEGTGPRSILPGRH*AGHSAP
Trigger: AGGAGCAGAGTGCCCAGCCAAATGCCTCCCAGGCAA...GATGGACCGGGGGCCAGTTCCCTCTGGACTCAAAGTGTCCAGTGTCTCAGAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS CCA 90 bp GGCTGCACTGGCCCCTGGCCCAGGAAGGCTGGGTCCGGCAACACCTaGCTAGCTCTAGTTGATGTAGTACACCTTGGCGGCATCATAATG +
Preference number: 5 (lower is better)
Translates to: GCTGPWPRKAGSGNT*LALVDVVHLGGIIM
Trigger: CATTATGATGCCGCCAAGGTGTACTACATCAACTAGAGCTAGCCAGGTGTTGCCGGACCCAGCCTTCCTGGGCCAGGGGCCAGTGCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326085.7
ENST00000503498.1
ENST00000505956.6
ENST00000514900.5
CDS-3UTR CAA 90 bp CCCTCTGAGACACTGGACACTTTGAGTCCAGAGGGAACTGGCCCCCGGTCCATCGGCGTGATGCTGGGCTaGTTCTCCAGCCACCTCTTT +
Preference number: 5 (lower is better)
Translates to: PSETLDTLSPEGTGPRSIGVMLG*FSSHLF
Trigger: AAAGAGGTGGCTGGAGAACAAGCCCAGCATCACGCC...GATGGACCGGGGGCCAGTTCCCTCTGGACTCAAAGTGTCCAGTGTCTCAGAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CAA 90 bp ACACATCTACCCTCTGAGACACTGGACACTTTGAGTCCAGAGGGAACTGGCCCCCGCTCGCGGTACCGCTaGCCCACTTCCTCCATCTCC +
Preference number: 5 (lower is better)
Translates to: THLPSETLDTLSPEGTGPRSRYR*PTSSIS
Trigger: GGAGATGGAGGAAGTGGGCAAGCGGTACCGCGAGCG...GGGGCCAGTTCCCTCTGGACTCAAAGTGTCCAGTGTCTCAGAGGGTAGATGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS TCA 90 bp GGGAGGCAGTGCTCATCAAAGTGCCGATTCCCACAGCGCACCAGGTaGCATTGCTCCGTGTACTGGATGGAGGGGATCGTGAGCTTGTGC +
Preference number: 5 (lower is better)
Translates to: GRQCSSKCRFPQRTR*HCSVYWMEGIVSLC
Trigger: GCACAAGCTCACGATCCCCTCCATCCAGTACACGGAGCAATGTCACCTGGTGCGCTGTGGGAATCGGCACTTTGATGAGCACTGCCTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326085.7
ENST00000503498.1
ENST00000505956.6
ENST00000514900.5
CDS TCA 90 bp AGCATTGCAGGTAGACCAGAAAGTTGTGCCTGCGGGCCGAGTCAATaGGCTCCCTCATATCCCCGTGGATGGTGGACGGGAGGCAGTGCT +
Preference number: 5 (lower is better)
Translates to: SIAGRPESCACGPSQ*APSYPRGWWTGGSA
Trigger: AGCACTGCCTCCCGTCCACCATCCACGGGGATATGAGGGAGCTCATTGACTCGGCCCGCAGGCACAACTTTCTGGTCTACCTGCAATGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326085.7
ENST00000503498.1
ENST00000505956.6
ENST00000514900.5
CDS GCA 90 bp GCCTCTGCAGGGATGCTGCCTTGTTCCTCTGCAGTCACCCACGGATaGTGCCCACGGGTTGTCACCTGCTGCTTGACTCAAATCTGGGTA +
Preference number: 5 (lower is better)
Translates to: ASAGMLPCSSAVTHG*CPRVVTCCLTQIWV
Trigger: TACCCAGATTTGAGTCAAGCAGCAGGTGACAACCCGTGGGCAGCATCCGTGGGTGACTGCAGAGGAACAAGGCAGCATCCCTGCAGAGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514900.5
CDS CCA 90 bp AAGTTGTGCCTGCGGGCCGAGTCAATGAGCTCCCTCATATCCCCGTaGATGGTGGACGGGAGGCAGTGCTCATCAAAGTGCCGATTCCCA +
Preference number: 5 (lower is better)
Translates to: KLCLRAESMSSLISP*MVDGRQCSSKCRFP
Trigger: TGGGAATCGGCACTTTGATGAGCACTGCCTCCCGTCCACCATCCACGGGGATATGAGGGAGCTCATTGACTCGGCCCGCAGGCACAACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326085.7
ENST00000503498.1
ENST00000505956.6
ENST00000514900.5
CDS CCA 90 bp CTACAAGGCCCTGCTGTACCATCTGGCCTCAGCTGCCTTCCCACCTaGTCCATGGCATACCATTCACCCTTCACCCATTCCACCCAGCCA +
Preference number: 5 (lower is better)
Translates to: LQGPAVPSGLSCLPT*SMAYHSPFTHSTQP
Trigger: TGGCTGGGTGGAATGGGTGAAGGGTGAATGGTATGCCATGGACCAGGTGGGAAGGCAGCTGAGGCCAGATGGTACAGCAGGGCCTTGTAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS-3UTR CAA 90 bp CCCTCTGAGACACTGGACACTTTGAGTCCAGAGGGAACTGGCCCCCGGTCCATCAGATATAATGCTCCCTaGCAGTGGCCAGGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: PSETLDTLSPEGTGPRSIRYNAP*QWPGCS
Trigger: GGAGCAGCCTGGCCACTGCAAGGGAGCATTATATCT...GATGGACCGGGGGCCAGTTCCCTCTGGACTCAAAGTGTCCAGTGTCTCAGAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CAA 90 bp CCCTCTGAGACACTGGACACTTTGAGTCCAGAGGGAACTGGCCCCCGGTCCATCGTCAGTAGGTCCACTTaGGGAAGCTGTGGGGCTGAA +
Preference number: 5 (lower is better)
Translates to: PSETLDTLSPEGTGPRSIVSRST*GSCGAE
Trigger: TTCAGCCCCACAGCTTCCCAAAGTGGACCTACTGAC...GATGGACCGGGGGCCAGTTCCCTCTGGACTCAAAGTGTCCAGTGTCTCAGAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS TCA 90 bp CTGGCCCAGGAAGGCTGGGTCCGGCAACACCTGGCTAGCTCTAGTTaGTGTAGTACACCTTGGCGGCATCATAATGGGCGTGGGTCATGT +
Preference number: 5 (lower is better)
Translates to: LAQEGWVRQHLASSS*CSTPWRHHNGRGSC
Trigger: ACATGACCCACGCCCATTATGATGCCGCCAAGGTGTACTACATCAACTAGAGCTAGCCAGGTGTTGCCGGACCCAGCCTTCCTGGGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326085.7
ENST00000503498.1
ENST00000505956.6
ENST00000514900.5
CDS TCA 90 bp TGGCCAAACCACAGTCGGCCAAAACTGGGGAACACACTGAGGAAGTaGGTTTGGAGGAGAGGCCAAGGCTGCCTGCACCATGCTTGCTCC +
Preference number: 5 (lower is better)
Translates to: WPNHSRPKLGNTLRK*VWRRGQGCLHHACS
Trigger: GGAGCAAGCATGGTGCAGGCAGCCTTGGCCTCTCCTCCAAACTCACTTCCTCAGTGTGTTCCCCAGTTTTGGCCGACTGTGGTTTGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS TCA 90 bp CAGAGGCTTGGCCAAACCACAGTCGGCCAAAACTGGGGAACACACTaGGGAAGTGAGTTTGGAGGAGAGGCCAAGGCTGCCTGCACCATG +
Preference number: 5 (lower is better)
Translates to: QRLGQTTVGQNWGTH*GSEFGGEAKAACTM
Trigger: CATGGTGCAGGCAGCCTTGGCCTCTCCTCCAAACTCACTTCCTCAGTGTGTTCCCCAGTTTTGGCCGACTGTGGTTTGGCCAAGCCTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS GCA 90 bp ACGGCCTCACCCCAGATCTTTACCATTGTTAGGAAACCCCTCCACTaGCTCCTCCAGGGCTCCTGTGTGACTCAGGGAGGACAAGGAAGC +
Preference number: 5 (lower is better)
Translates to: TASPQIFTIVRKPLH*LLQGSCVTQGGQGS
Trigger: GCTTCCTTGTCCTCCCTGAGTCACACAGGAGCCCTGGAGGAGGCAGTGGAGGGGTTTCCTAACAATGGTAAAGATCTGGGGTGAGGCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS GCA 90 bp TTAGATGTGGCCCTCCTCTCCATCTCCACTAATGGCGTCCCTTACTaGACCAACCCCAGCCCTCTGGTTGCCATTCTCGTCCTGTCACCC +
Preference number: 5 (lower is better)
Translates to: LDVALLSISTNGVPY*TNPSPLVAILVLSP
Trigger: GGGTGACAGGACGAGAATGGCAACCAGAGGGCTGGGGTTGGTGCAGTAAGGGACGCCATTAGTGGAGATGGAGAGGAGGGCCACATCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS GCA 90 bp TCTGCAGGGATGCTGCCTTGTTCCTCTGCAGTCACCCACGGATGCTaGCCACGGGTTGTCACCTGCTGCTTGACTCAAATCTGGGTAGCT +
Preference number: 5 (lower is better)
Translates to: SAGMLPCSSAVTHGC*PRVVTCCLTQIWVA
Trigger: AGCTACCCAGATTTGAGTCAAGCAGCAGGTGACAACCCGTGGGCAGCATCCGTGGGTGACTGCAGAGGAACAAGGCAGCATCCCTGCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514900.5
CDS CCA 90 bp GCAGCGACAAGAACAGACTGTGGTACGCTTCATAGTCGTCGTCCATaGTCGTGGTGCTGGGAGGGGGTGCTGAAGGGCGTGTGTGAATGT +
Preference number: 5 (lower is better)
Translates to: AATRTDCGTLHSRRP*SWCWEGVLKGVCEC
Trigger: ACATTCACACACGCCCTTCAGCACCCCCTCCCAGCACCACGACCATGGACGACGACTATGAAGCGTACCACAGTCTGTTCTTGTCGCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326085.7
ENST00000503957.1
ENST00000505956.6
CDS GCA 90 bp GTCAGTAGGTCCACTTTGGGAAGCTGTGGGGCTGAATCCACCTCCTaGTTCTTGAGCGGACCCTTCAGGGAATCTCTGTGCTTGGCCAAG +
Preference number: 5 (lower is better)
Translates to: VSRSTLGSCGAESTS*FLSGPFRESLCLAK
Trigger: CTTGGCCAAGCACAGAGATTCCCTGAAGGGTCCGCTCAAGAAGCAGGAGGTGGATTCAGCCCCACAGCTTCCCAAAGTGGACCTACTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326085.7
ENST00000503498.1
ENST00000505956.6
ENST00000514900.5
CDS GCA 90 bp TCCTCTGCAGTCACCCACGGATGCTGCCCACGGGTTGTCACCTGCTaGTTGACTCAAATCTGGGTAGCTCAGGCTTTGGAGTACCAAAGG +
Preference number: 5 (lower is better)
Translates to: SSAVTHGCCPRVVTC*LTQIWVAQALEYQR
Trigger: CCTTTGGTACTCCAAAGCCTGAGCTACCCAGATTTGAGTCAAGCAGCAGGTGACAACCCGTGGGCAGCATCCGTGGGTGACTGCAGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514900.5
CDS CCA 90 bp CTGCCGCAGCTTCGACCTCTGGCTCAGCCAGGTCTTCCTGTCCTCTaGCTGCTCTTGGATATCTCTAGCTTCCAGAACTTTGAAGCTGGG +
Preference number: 5 (lower is better)
Translates to: LPQLRPLAQPGLPVL*LLLDISSFQNFEAG
Trigger: CCCAGCTTCAAAGTTCTGGAAGCTAGAGATATCCAAGAGCAGCCAGAGGACAGGAAGACCTGGCTGAGCCAGAGGTCGAAGCTGCGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS CCA 90 bp GCTTTCTTCCTGGTGGTCCTGGTAGTTGCCTGGGAGGCATTTGGCTaGGCACTCTGCTCCTCGTGGATCATGTGTAAGACCTTGGCCTCT +
Preference number: 5 (lower is better)
Translates to: AFFLVVLVVAWEAFG*ALCSSWIMCKTLAS
Trigger: AGAGGCCAAGGTCTTACACATGATCCACGAGGAGCAGAGTGCCCAGCCAAATGCCTCCCAGGCAACTACCAGGACCACCAGGAAGAAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326085.7
ENST00000503498.1
ENST00000505956.6
CDS CCA 90 bp CCATCTCCACTAATGGCGTCCCTTACTGCACCAACCCCAGCCCTCTaGTTGCCATTCTCGTCCTGTCACCCTGTCTCACCAAGCAGCAAA +
Preference number: 5 (lower is better)
Translates to: PSPLMASLTAPTPAL*LPFSSCHPVSPSSK
Trigger: TTTGCTGCTTGGTGAGACAGGGTGACAGGACGAGAATGGCAACCAGAGGGCTGGGGTTGGTGCAGTAAGGGACGCCATTAGTGGAGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS CCA 90 bp GGTCCGAAACTCAGCTTGTCAGTCCTCTTAGACTTGCCAGGGCCCTaGGACCGGAGCAGAGCCAGATTCGGAGAAAAGACCTTCCAGTCA +
Preference number: 5 (lower is better)
Translates to: GPKLSLSVLLDLPGP*DRSRARFGEKTFQS
Trigger: TGACTGGAAGGTCTTTTCTCCGAATCTGGCTCTGCTCCGGTCCCAGGGCCCTGGCAAGTCTAAGAGGACTGACAAGCTGAGTTTCGGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514900.5
CDS-3UTR CAA 90 bp ACACATCTACCCTCTGAGACACTGGACACTTTGAGTCCAGAGGGAACTGGCCCCCCCGGCCAGAAGGAATaGGGGTGTGTTTGCTGCAGA +
Preference number: 5 (lower is better)
Translates to: THLPSETLDTLSPEGTGPPGQKE*GCVCCR
Trigger: TCTGCAGCAAACACACCCCAATTCCTTCTGGCCGGG...GGGGCCAGTTCCCTCTGGACTCAAAGTGTCCAGTGTCTCAGAGGGTAGATGTGT
57% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS TCA 90 bp TCCATGGCATACCATTCACCCTTCACCCATTCCACCCAGCCACCCTaGCCACCTTCTGTCTCTTGCAAGCTATCCTACCCCAGGGCCTTT +
Preference number: 5 (lower is better)
Translates to: SMAYHSPFTHSTQPP*PPSVSCKLSYPRAF
Trigger: AAAGGCCCTGGGGTAGGATAGCTTGCAAGAGACAGAAGGTGGTCAGGGTGGCTGGGTGGAATGGGTGAAGGGTGAATGGTATGCCATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS GCA 90 bp TGCGTAGGGGTACCGGGGTATCAGATAAACCGTAACTCCAAGTCGTaGGAAAGGCGCTCAGCTCAGACTGCAGAAGCAACCTGTTGCCGT +
Preference number: 5 (lower is better)
Translates to: CVGVPGYQINRNSKS*ERRSAQTAEATCCR
Trigger: ACGGCAACAGGTTGCTTCTGCAGTCTGAGCTGAGCGCCTTTCGCACGACTTGGAGTTACGGTTTATCTGATACCCCGGTACCCCTACGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000326085.7
CDS GCA 90 bp CGCAGCTTCGACCTCTGGCTCAGCCAGGTCTTCCTGTCCTCTGGCTaGTCTTGGATATCTCTAGCTTCCAGAACTTTGAAGCTGGGGATG +
Preference number: 5 (lower is better)
Translates to: RSFDLWLSQVFLSSG*SWISLASRTLKLGM
Trigger: CATCCCCAGCTTCAAAGTTCTGGAAGCTAGAGATATCCAAGAGCAGCCAGAGGACAGGAAGACCTGGCTGAGCCAGAGGTCGAAGCTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS GCA 90 bp TTGTTCTCCAGCCACCTCTTTACATCACCAAAGGACTCTAGCTCCTaGCGCAGCTTCGACCTCTGGCTCAGCCAGGTCTTCCTGTCCTCT +
Preference number: 5 (lower is better)
Translates to: LFSSHLFTSPKDSSS*RSFDLWLSQVFLSS
Trigger: AGAGGACAGGAAGACCTGGCTGAGCCAGAGGTCGAAGCTGCGGCAGGAGCTAGAGTCCTTTGGTGATGTAAAGAGGTGGCTGGAGAACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326085.7
ENST00000503498.1
ENST00000505956.6
CDS GCA 90 bp AGGAGGCCTTGGACCCACACACACATAAATGTCTCTGGAAAGGCTTaGCATTTGGGTCAGTTCTCAGCCTCTCAGGTGGGCTCTGGTGGG +
Preference number: 5 (lower is better)
Translates to: RRPWTHTHINVSGKA*HLGQFSASQVGSGG
Trigger: CCCACCAGAGCCCACCTGAGAGGCTGAGAACTGACCCAAATGGCAAGCCTTTCCAGAGACATTTATGTGTGTGTGGGTCCAAGGCCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS GCA 90 bp TGTTCCTCTGCAGTCACCCACGGATGCTGCCCACGGGTTGTCACCTaGTGCTTGACTCAAATCTGGGTAGCTCAGGCTTTGGAGTACCAA +
Preference number: 5 (lower is better)
Translates to: CSSAVTHGCCPRVVT*CLTQIWVAQALEYQ
Trigger: TTGGTACTCCAAAGCCTGAGCTACCCAGATTTGAGTCAAGCAGCAGGTGACAACCCGTGGGCAGCATCCGTGGGTGACTGCAGAGGAACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514900.5
CDS CCA 90 bp GGCTTGCCATTTGGGTCAGTTCTCAGCCTCTCAGGTGGGCTCTGGTaGGCTGAGTATCCTCCTCTAAGAACAAGGGCTGGGACTCATTTG +
Preference number: 5 (lower is better)
Translates to: GLPFGSVLSLSGGLW*AEYPPLRTRAGTHL
Trigger: CAAATGAGTCCCAGCCCTTGTTCTTAGAGGAGGATACTCAGCCCACCAGAGCCCACCTGAGAGGCTGAGAACTGACCCAAATGGCAAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS CCA 90 bp GGCTTGGGTCAGCTGGACCTACCCTCAGAATCTGGCCAGGTGACCTaGGCAAGTCACTTCCCCTTTCTCATCCTTGGTTTTCTCATGGTC +
Preference number: 5 (lower is better)
Translates to: GLGQLDLPSESGQVT*ASHFPFLILGFLMV
Trigger: GACCATGAGAAAACCAAGGATGAGAAAGGGGAAGTGACTTGCCCAGGTCACCTGGCCAGATTCTGAGGGTAGGTCCAGCTGACCCAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514900.5
CDS-3UTR CAA 90 bp GTCAAAAACTGCACGTCATTCCTTGGACACATCTACCCTCTGAGACACTGGACACGCTCGCGGTACCGCTaGCCCACTTCCTCCATCTCC +
Preference number: 5 (lower is better)
Translates to: VKNCTSFLGHIYPLRHWTRSRYR*PTSSIS
Trigger: GGAGATGGAGGAAGTGGGCAAGCGGTACCGCGAGCG...TGTCCAGTGTCTCAGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CAA 90 bp CCCTCTGAGACACTGGACACTTTGAGTCCAGAGGGAACTGGCCCCCGGTCCATCACAGAGCTTCCAGCATaGCAGGTAGACCAGAAAGTT +
Preference number: 5 (lower is better)
Translates to: PSETLDTLSPEGTGPRSITELPA*QVDQKV
Trigger: AACTTTCTGGTCTACCTGCAATGCTGGAAGCTCTGT...GATGGACCGGGGGCCAGTTCCCTCTGGACTCAAAGTGTCCAGTGTCTCAGAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS GCA 90 bp CCAGGGCTCCTGTGTGACTCAGGGAGGACAAGGAAGCCCCAAACATaGATGAGATTAAGTTCCTGCCAACCTGGTAGATGGGAACAGAGC +
Preference number: 5 (lower is better)
Translates to: PGLLCDSGRTRKPQT*MRLSSCQPGRWEQS
Trigger: GCTCTGTTCCCATCTACCAGGTTGGCAGGAACTTAATCTCATGCATGTTTGGGGCTTCCTTGTCCTCCCTGAGTCACACAGGAGCCCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS CCA 90 bp TTTACATCACCAAAGGACTCTAGCTCCTGCCGCAGCTTCGACCTCTaGCTCAGCCAGGTCTTCCTGTCCTCTGGCTGCTCTTGGATATCT +
Preference number: 5 (lower is better)
Translates to: FTSPKDSSSCRSFDL*LSQVFLSSGCSWIS
Trigger: AGATATCCAAGAGCAGCCAGAGGACAGGAAGACCTGGCTGAGCCAGAGGTCGAAGCTGCGGCAGGAGCTAGAGTCCTTTGGTGATGTAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326085.7
ENST00000503498.1
ENST00000505956.6
CDS CCA 90 bp GGTAGAGCTGCAGCTTATCCAGAAGATGACCCGGCCAGAAGGAATTaGGGTGTGTTTGCTGCAGACCACTGGACCTCTTCACCTTCAGCT +
Preference number: 5 (lower is better)
Translates to: GRAAAYPEDDPARRN*GVFAADHWTSSPSA
Trigger: AGCTGAAGGTGAAGAGGTCCAGTGGTCTGCAGCAAACACACCCCAATTCCTTCTGGCCGGGTCATCTTCTGGATAAGCTGCAGCTCTACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326085.7
ENST00000503498.1
ENST00000505956.6
ENST00000514900.5
CDS CCA 90 bp AAAGGCTTGCCATTTGGGTCAGTTCTCAGCCTCTCAGGTGGGCTCTaGTGGGCTGAGTATCCTCCTCTAAGAACAAGGGCTGGGACTCAT +
Preference number: 5 (lower is better)
Translates to: KGLPFGSVLSLSGGL*WAEYPPLRTRAGTH
Trigger: ATGAGTCCCAGCCCTTGTTCTTAGAGGAGGATACTCAGCCCACCAGAGCCCACCTGAGAGGCTGAGAACTGACCCAAATGGCAAGCCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS CCA 90 bp AGACAAGACAGCTCAGGCACAGAGGGAGGTCGGGGGAAAGTCTCTTaGGTGACTGCCAAACTTCACCCTCATACAATGGGCCCCAGTAAA +
Preference number: 5 (lower is better)
Translates to: RQDSSGTEGGRGKVS*VTAKLHPHTMGPSK
Trigger: TTTACTGGGGCCCATTGTATGAGGGTGAAGTTTGGCAGTCACCCAAGAGACTTTCCCCCGACCTCCCTCTGTGCCTGAGCTGTCTTGTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS TCA 90 bp GGTCCACTTTGGGAAGCTGTGGGGCTGAATCCACCTCCTGCTTCTTaGGCGGACCCTTCAGGGAATCTCTGTGCTTGGCCAAGATATAAT +
Preference number: 5 (lower is better)
Translates to: GPLWEAVGLNPPPAS*ADPSGNLCAWPRYN
Trigger: ATTATATCTTGGCCAAGCACAGAGATTCCCTGAAGGGTCCGCTCAAGAAGCAGGAGGTGGATTCAGCCCCACAGCTTCCCAAAGTGGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326085.7
ENST00000503498.1
ENST00000505956.6
ENST00000514900.5
CDS TCA 90 bp GCCATTTGGGTCAGTTCTCAGCCTCTCAGGTGGGCTCTGGTGGGCTaGGTATCCTCCTCTAAGAACAAGGGCTGGGACTCATTTGTCTTT +
Preference number: 5 (lower is better)
Translates to: AIWVSSQPLRWALVG*VSSSKNKGWDSFVF
Trigger: AAAGACAAATGAGTCCCAGCCCTTGTTCTTAGAGGAGGATACTCAGCCCACCAGAGCCCACCTGAGAGGCTGAGAACTGACCCAAATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS CCA 90 bp TTCTTTGGCGTTTTCTTGTCAGTCCTCTTAGACTTGCCAGGGCCCTaGGACCGGAGCAGAGCCAGATTCGGAGAAAAGACCTTCCAGTCA +
Preference number: 5 (lower is better)
Translates to: FFGVFLSVLLDLPGP*DRSRARFGEKTFQS
Trigger: TGACTGGAAGGTCTTTTCTCCGAATCTGGCTCTGCTCCGGTCCCAGGGCCCTGGCAAGTCTAAGAGGACTGACAAGAAAACGCCAAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326085.7
ENST00000503498.1
ENST00000505956.6
CDS-3UTR CAA 90 bp AAACTGCACGTCATTCCTTGGACACATCTACCCTCTGAGACACTGGACACTTTGTCGATGTGGGCTTGCTaGCGTAGGGGTACCGGGGTA +
Preference number: 5 (lower is better)
Translates to: KLHVIPWTHLPSETLDTLSMWAC*RRGTGV
Trigger: TACCCCGGTACCCCTACGCAAGCAAGCCCACATCGA...CAAAGTGTCCAGTGTCTCAGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CAA 90 bp AAACTGCACGTCATTCCTTGGACACATCTACCCTCTGAGACACTGGACACTTTGTGGGGGAGCCTGAGGTaGGGATGCAGGATTAAGGGG +
Preference number: 5 (lower is better)
Translates to: KLHVIPWTHLPSETLDTLWGSLR*GCRIKG
Trigger: CCCCTTAATCCTGCATCCCAACCTCAGGCTCCCCCA...CAAAGTGTCCAGTGTCTCAGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CAA 90 bp AAACTGCACGTCATTCCTTGGACACATCTACCCTCTGAGACACTGGACACTTTGTTGCCTGGGAGGCATTaGGCTGGGCACTCTGCTCCT +
Preference number: 5 (lower is better)
Translates to: KLHVIPWTHLPSETLDTLLPGRH*AGHSAP
Trigger: AGGAGCAGAGTGCCCAGCCAAATGCCTCCCAGGCAA...CAAAGTGTCCAGTGTCTCAGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CAA 90 bp AAACTGCACGTCATTCCTTGGACACATCTACCCTCTGAGACACTGGACACTTTGGGCCAGGCTGCTCCTTaGCTGAGCCATAGACCACTG +
Preference number: 5 (lower is better)
Translates to: KLHVIPWTHLPSETLDTLGQAAP*LSHRPL
Trigger: CAGTGGTCTATGGCTCAGCAAAGGAGCAGCCTGGCC...CAAAGTGTCCAGTGTCTCAGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CAA 90 bp CAGGGGAGGGAAATAGTCAAAAACTGCACGTCATTCCTTGGACACATCTACCCTGGCCAGGCTGCTCCTTaGCTGAGCCATAGACCACTG +
Preference number: 5 (lower is better)
Translates to: QGREIVKNCTSFLGHIYPGQAAP*LSHRPL
Trigger: CAGTGGTCTATGGCTCAGCAAAGGAGCAGCCTGGCC...AGGGTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATTTCCCTCCCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CAA 90 bp CCCTCTGAGACACTGGACACTTTGAGTCCAGAGGGAACTGGCCCCCGGTCCATCTTCTTTGGCGTTTTCTaGTCAGTCCTCTTAGACTTG +
Preference number: 5 (lower is better)
Translates to: PSETLDTLSPEGTGPRSIFFGVF*SVLLDL
Trigger: CAAGTCTAAGAGGACTGACAAGAAAACGCCAAAGAA...GATGGACCGGGGGCCAGTTCCCTCTGGACTCAAAGTGTCCAGTGTCTCAGAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS TCA 90 bp GGAGGTGATAGTTTCTCTGCAGGGCAGCTGGTTGAGACTGGACATTaGAAATCTCCTGGAGGACTGAGGAATGGATGCTCTGAGCTGCCT +
Preference number: 5 (lower is better)
Translates to: GGDSFSAGQLVETGH*KSPGGLRNGCSELP
Trigger: AGGCAGCTCAGAGCATCCATTCCTCAGTCCTCCAGGAGATTTTCAATGTCCAGTCTCAACCAGCTGCCCTGCAGAGAAACTATCACCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS GCA 90 bp AAGAACTACTGGAAGAAGGCACCCCTGCCAAGACGCTCAAACTCTTaGCTCTTTAGACAAAGTGAGAGACACCCGGACAGAGCAGGAGCA +
Preference number: 5 (lower is better)
Translates to: KNYWKKAPLPRRSNS*LFRQSERHPDRAGA
Trigger: TGCTCCTGCTCTGTCCGGGTGTCTCTCACTTTGTCTAAAGAGGCAAGAGTTTGAGCGTCTTGGCAGGGGTGCCTTCTTCCAGTAGTTCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS GCA 90 bp CTGACCACCTTCTGTCTCTTGCAAGCTATCCTACCCCAGGGCCTTTaGCTTCACAGTTCTATCTGCCTAGATTGTGCTTCCCCCAAGACT +
Preference number: 5 (lower is better)
Translates to: LTTFCLLQAILPQGL*LHSSICLDCASPKT
Trigger: AGTCTTGGGGGAAGCACAATCTAGGCAGATAGAACTGTGAAGGCAAAGGCCCTGGGGTAGGATAGCTTGCAAGAGACAGAAGGTGGTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS CCA 90 bp CTTTGGAGTACCAAAGGAGGCCATTTTCTTAGAGAAGACTCAGGTTaGCCTCTCGAAAGGGCTGGAGGCAGGTCCCGGGGAAATGTTCTT +
Preference number: 5 (lower is better)
Translates to: LWSTKGGHFLREDSG*PLERAGGRSRGNVL
Trigger: AAGAACATTTCCCCGGGACCTGCCTCCAGCCCTTTCGAGAGGCCAACCTGAGTCTTCTCTAAGAAAATGGCCTCCTTTGGTACTCCAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514900.5
CDS-3UTR CAA 90 bp CAGGGGAGGGAAATAGTCAAAAACTGCACGTCATTCCTTGGACACATCTACCCTGGCGTGATGCTGGGCTaGTTCTCCAGCCACCTCTTT +
Preference number: 5 (lower is better)
Translates to: QGREIVKNCTSFLGHIYPGVMLG*FSSHLF
Trigger: AAAGAGGTGGCTGGAGAACAAGCCCAGCATCACGCC...AGGGTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATTTCCCTCCCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CAA 90 bp ACACATCTACCCTCTGAGACACTGGACACTTTGAGTCCAGAGGGAACTGGCCCCAATATCTCCAGGATCTaGATCTTGCGGCTATGCAGG +
Preference number: 5 (lower is better)
Translates to: THLPSETLDTLSPEGTGPNISRI*ILRLCR
Trigger: CCTGCATAGCCGCAAGATCAAGATCCTGGAGATATT...GGGGCCAGTTCCCTCTGGACTCAAAGTGTCCAGTGTCTCAGAGGGTAGATGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CAA 90 bp GAGAAAAACTCCAACCTGCTTTATGTAGAAAGGGCAGAGGTCAGGGGAGGGAAATCCACCTCCTGCTTCTaGAGCGGACCCTTCAGGGAA +
Preference number: 5 (lower is better)
Translates to: EKNSNLLYVERAEVRGGKSTSCF*SGPFRE
Trigger: TTCCCTGAAGGGTCCGCTCAAGAAGCAGGAGGTGGA...TTTCCCTCCCCTGACCTCTGCCCTTTCTACATAAAGCAGGTTGGAGTTTTTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CAA 90 bp CAGGGGAGGGAAATAGTCAAAAACTGCACGTCATTCCTTGGACACATCTACCCTTCCACCTCCTGCTTCTaGAGCGGACCCTTCAGGGAA +
Preference number: 5 (lower is better)
Translates to: QGREIVKNCTSFLGHIYPSTSCF*SGPFRE
Trigger: TTCCCTGAAGGGTCCGCTCAAGAAGCAGGAGGTGGA...AGGGTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATTTCCCTCCCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CAA 90 bp AAACTCCAACCTGCTTTATGTAGAAAGGGCAGAGGTCAGGGGAGGGAAATAGTCGCGCACCAGGTGACATaGCTCCGTGTACTGGATGGA +
Preference number: 5 (lower is better)
Translates to: KLQPALCRKGRGQGREIVAHQVT*LRVLDG
Trigger: TCCATCCAGTACACGGAGCAATGTCACCTGGTGCGC...GACTATTTCCCTCCCCTGACCTCTGCCCTTTCTACATAAAGCAGGTTGGAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CAA 90 bp AAACTGCACGTCATTCCTTGGACACATCTACCCTCTGAGACACTGGACACTTTGGCGCACCAGGTGACATaGCTCCGTGTACTGGATGGA +
Preference number: 5 (lower is better)
Translates to: KLHVIPWTHLPSETLDTLAHQVT*LRVLDG
Trigger: TCCATCCAGTACACGGAGCAATGTCACCTGGTGCGC...CAAAGTGTCCAGTGTCTCAGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CAA 90 bp CAGGGGAGGGAAATAGTCAAAAACTGCACGTCATTCCTTGGACACATCTACCCTCCCGGCCAGAAGGAATaGGGGTGTGTTTGCTGCAGA +
Preference number: 5 (lower is better)
Translates to: QGREIVKNCTSFLGHIYPPGQKE*GCVCCR
Trigger: TCTGCAGCAAACACACCCCAATTCCTTCTGGCCGGG...AGGGTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATTTCCCTCCCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CAA 90 bp GAAATAGTCAAAAACTGCACGTCATTCCTTGGACACATCTACCCTCTGAGACACTCGATGTGGGCTTGCTaGCGTAGGGGTACCGGGGTA +
Preference number: 5 (lower is better)
Translates to: EIVKNCTSFLGHIYPLRHSMWAC*RRGTGV
Trigger: TACCCCGGTACCCCTACGCAAGCAAGCCCACATCGA...GTGTCTCAGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CAA 90 bp GAAATAGTCAAAAACTGCACGTCATTCCTTGGACACATCTACCCTCTGAGACACTGGGGGAGCCTGAGGTaGGGATGCAGGATTAAGGGG +
Preference number: 5 (lower is better)
Translates to: EIVKNCTSFLGHIYPLRHWGSLR*GCRIKG
Trigger: CCCCTTAATCCTGCATCCCAACCTCAGGCTCCCCCA...GTGTCTCAGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CAA 90 bp AATGAGAAAAACTCCAACCTGCTTTATGTAGAAAGGGCAGAGGTCAGGGGAGGGGTCAGTAGGTCCACTTaGGGAAGCTGTGGGGCTGAA +
Preference number: 5 (lower is better)
Translates to: NEKNSNLLYVERAEVRGGVSRST*GSCGAE
Trigger: TTCAGCCCCACAGCTTCCCAAAGTGGACCTACTGAC...CCCTCCCCTGACCTCTGCCCTTTCTACATAAAGCAGGTTGGAGTTTTTCTCATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CAA 90 bp ACACATCTACCCTCTGAGACACTGGACACTTTGAGTCCAGAGGGAACTGGCCCCATCTGGAAAATGATCTaGTCTCCTGGGTACAGCAAG +
Preference number: 5 (lower is better)
Translates to: THLPSETLDTLSPEGTGPIWKMI*SPGYSK
Trigger: CTTGCTGTACCCAGGAGACAAGATCATTTTCCAGAT...GGGGCCAGTTCCCTCTGGACTCAAAGTGTCCAGTGTCTCAGAGGGTAGATGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CAA 90 bp AAACTGCACGTCATTCCTTGGACACATCTACCCTCTGAGACACTGGACACTTTGGGAATTGGGGTGTGTTaGCTGCAGACCACTGGACCT +
Preference number: 5 (lower is better)
Translates to: KLHVIPWTHLPSETLDTLGIGVC*LQTTGP
Trigger: AGGTCCAGTGGTCTGCAGCAAACACACCCCAATTCC...CAAAGTGTCCAGTGTCTCAGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS GCA 90 bp TTGCAAGCTATCCTACCCCAGGGCCTTTGCCTTCACAGTTCTATCTaGCTAGATTGTGCTTCCCCCAAGACTAGTTCCTGTCAATCACTC +
Preference number: 5 (lower is better)
Translates to: LQAILPQGLCLHSSI*LDCASPKTSSCQSL
Trigger: GAGTGATTGACAGGAACTAGTCTTGGGGGAAGCACAATCTAGGCAGATAGAACTGTGAAGGCAAAGGCCCTGGGGTAGGATAGCTTGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS-3UTR CAA 90 bp AAACTCCAACCTGCTTTATGTAGAAAGGGCAGAGGTCAGGGGAGGGAAATAGTCTTCTGCTGGAACTGCTaGAAGCAGTGGGCAATGACC +
Preference number: 5 (lower is better)
Translates to: KLQPALCRKGRGQGREIVFCWNC*KQWAMT
Trigger: GGTCATTGCCCACTGCTTCAAGCAGTTCCAGCAGAA...GACTATTTCCCTCCCCTGACCTCTGCCCTTTCTACATAAAGCAGGTTGGAGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CAA 90 bp GGGGAGGGAAATAGTCAAAAACTGCACGTCATTCCTTGGACACATCTACCCTCTTTCTGCTGGAACTGCTaGAAGCAGTGGGCAATGACC +
Preference number: 5 (lower is better)
Translates to: GEGNSQKLHVIPWTHLPSFCWNC*KQWAMT
Trigger: GGTCATTGCCCACTGCTTCAAGCAGTTCCAGCAGAA...AGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATTTCCCTCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CAA 90 bp GGGGAGGGAAATAGTCAAAAACTGCACGTCATTCCTTGGACACATCTACCCTCTGTCCTCTGGCTGCTCTaGGATATCTCTAGCTTCCAG +
Preference number: 5 (lower is better)
Translates to: GEGNSQKLHVIPWTHLPSVLWLL*DISSFQ
Trigger: CTGGAAGCTAGAGATATCCAAGAGCAGCCAGAGGAC...AGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATTTCCCTCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CAA 90 bp GAGAAAAACTCCAACCTGCTTTATGTAGAAAGGGCAGAGGTCAGGGGAGGGAAAGTCCTCTGGCTGCTCTaGGATATCTCTAGCTTCCAG +
Preference number: 5 (lower is better)
Translates to: EKNSNLLYVERAEVRGGKVLWLL*DISSFQ
Trigger: CTGGAAGCTAGAGATATCCAAGAGCAGCCAGAGGAC...TTTCCCTCCCCTGACCTCTGCCCTTTCTACATAAAGCAGGTTGGAGTTTTTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CAA 90 bp GAGAAAAACTCCAACCTGCTTTATGTAGAAAGGGCAGAGGTCAGGGGAGGGAAATCCATGGTGATGGTGTaGTGCTTCCCAAGAGAGCTG +
Preference number: 5 (lower is better)
Translates to: EKNSNLLYVERAEVRGGKSMVMV*CFPREL
Trigger: CAGCTCTCTTGGGAAGCACAACACCATCACCATGGA...TTTCCCTCCCCTGACCTCTGCCCTTTCTACATAAAGCAGGTTGGAGTTTTTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CAA 90 bp CAACCTGCTTTATGTAGAAAGGGCAGAGGTCAGGGGAGGGAAATAGTCAAAAACAGATATAATGCTCCCTaGCAGTGGCCAGGCTGCTCC +
Preference number: 5 (lower is better)
Translates to: QPALCRKGRGQGREIVKNRYNAP*QWPGCS
Trigger: GGAGCAGCCTGGCCACTGCAAGGGAGCATTATATCT...GTTTTTGACTATTTCCCTCCCCTGACCTCTGCCCTTTCTACATAAAGCAGGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CAA 90 bp CAACCTGCTTTATGTAGAAAGGGCAGAGGTCAGGGGAGGGAAATAGTCAAAAACGAGACACTGGACACTTaGAGTCCAGAGGGAACTGGC +
Preference number: 5 (lower is better)
Translates to: QPALCRKGRGQGREIVKNETLDT*SPEGTG
Trigger: GCCAGTTCCCTCTGGACTCAAAGTGTCCAGTGTCTC...GTTTTTGACTATTTCCCTCCCCTGACCTCTGCCCTTTCTACATAAAGCAGGTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS TCA 90 bp CTGGGCACTCAAGGGAATATCTACTCCTTAGTTAATCTCTGGGCCTaGAAATTTCCAGAGGCTTGGCCAAACCACAGTCGGCCAAAACTG +
Preference number: 5 (lower is better)
Translates to: LGTQGNIYSLVNLWA*KFPEAWPNHSRPKL
Trigger: CAGTTTTGGCCGACTGTGGTTTGGCCAAGCCTCTGGAAATTTTCAGGCCCAGAGATTAACTAAGGAGTAGATATTCCCTTGAGTGCCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS CCA 90 bp AATAATATCCTGACCTTACCACCTTCTATTGAGGCTGTGAACAAGTaGCTCAGCCTCTCTGAGCTCCAGCTTCCTCCTCGTAAAGCAGGA +
Preference number: 5 (lower is better)
Translates to: NNILTLPPSIEAVNK*LSLSELQLPPRKAG
Trigger: TCCTGCTTTACGAGGAGGAAGCTGGAGCTCAGAGAGGCTGAGCCACTTGTTCACAGCCTCAATAGAAGGTGGTAAGGTCAGGATATTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS-3UTR CAA 90 bp GGTCAGGGGAGGGAAATAGTCAAAAACTGCACGTCATTCCTTGGACACATCTACCTAGCTTCCAGAACTTaGAAGCTGGGGATGGGCTTT +
Preference number: 5 (lower is better)
Translates to: GQGREIVKNCTSFLGHIYLASRT*KLGMGF
Trigger: AAAGCCCATCCCCAGCTTCAAAGTTCTGGAAGCTAG...GTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATTTCCCTCCCCTGACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CAA 90 bp GAGAAAAACTCCAACCTGCTTTATGTAGAAAGGGCAGAGGTCAGGGGAGGGAAATATATCCTCCACCTCTaGGTTCTTCAGAGGGACTCC +
Preference number: 5 (lower is better)
Translates to: EKNSNLLYVERAEVRGGKYILHL*VLQRDS
Trigger: GGAGTCCCTCTGAAGAACCAAGAGGTGGAGGATATA...TTTCCCTCCCCTGACCTCTGCCCTTTCTACATAAAGCAGGTTGGAGTTTTTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CAA 90 bp AAACTGCACGTCATTCCTTGGACACATCTACCCTCTGAGACACTGGACACTTTGTATATCCTCCACCTCTaGGTTCTTCAGAGGGACTCC +
Preference number: 5 (lower is better)
Translates to: KLHVIPWTHLPSETLDTLYILHL*VLQRDS
Trigger: GGAGTCCCTCTGAAGAACCAAGAGGTGGAGGATATA...CAAAGTGTCCAGTGTCTCAGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CAA 90 bp TGTAGAAAGGGCAGAGGTCAGGGGAGGGAAATAGTCAAAAACTGCACGTCATTCCGGATGGGGCACACTTaGTCCATCTGGAAAATGATC +
Preference number: 5 (lower is better)
Translates to: CRKGRGQGREIVKNCTSFRMGHT*SIWKMI
Trigger: GATCATTTTCCAGATGGACAAAGTGTGCCCCATCCG...GAATGACGTGCAGTTTTTGACTATTTCCCTCCCCTGACCTCTGCCCTTTCTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CAA 90 bp AATGAGAAAAACTCCAACCTGCTTTATGTAGAAAGGGCAGAGGTCAGGGGAGGGCGGATGGGGCACACTTaGTCCATCTGGAAAATGATC +
Preference number: 5 (lower is better)
Translates to: NEKNSNLLYVERAEVRGGRMGHT*SIWKMI
Trigger: GATCATTTTCCAGATGGACAAAGTGTGCCCCATCCG...CCCTCCCCTGACCTCTGCCCTTTCTACATAAAGCAGGTTGGAGTTTTTCTCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CAA 90 bp GAAATAGTCAAAAACTGCACGTCATTCCTTGGACACATCTACCCTCTGAGACACGGAATTGGGGTGTGTTaGCTGCAGACCACTGGACCT +
Preference number: 5 (lower is better)
Translates to: EIVKNCTSFLGHIYPLRHGIGVC*LQTTGP
Trigger: AGGTCCAGTGGTCTGCAGCAAACACACCCCAATTCC...GTGTCTCAGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CAA 90 bp AATAGTCAAAAACTGCACGTCATTCCTTGGACACATCTACCCTCTGAGACACTGGAGACACTGGACACTTaGAGTCCAGAGGGAACTGGC +
Preference number: 5 (lower is better)
Translates to: NSQKLHVIPWTHLPSETLETLDT*SPEGTG
Trigger: GCCAGTTCCCTCTGGACTCAAAGTGTCCAGTGTCTC...CAGTGTCTCAGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS CCA 90 bp CCTTGTCTGGACAGATGTGGCCCCACAAATGTATTGCTTGGCAGATaGAACTTGAGCCATGTACAACCTTTACAACTGTTGACAGCAACC +
Preference number: 5 (lower is better)
Translates to: PCLDRCGPTNVLLGR*NLSHVQPLQLLTAT
Trigger: GGTTGCTGTCAACAGTTGTAAAGGTTGTACATGGCTCAAGTTCCATCTGCCAAGCAATACATTTGTGGGGCCACATCTGTCCAGACAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS CCA 90 bp CTCTGTGCCTTGTCTGGACAGATGTGGCCCCACAAATGTATTGCTTaGCAGATGGAACTTGAGCCATGTACAACCTTTACAACTGTTGAC +
Preference number: 5 (lower is better)
Translates to: LCALSGQMWPHKCIA*QMELEPCTTFTTVD
Trigger: GTCAACAGTTGTAAAGGTTGTACATGGCTCAAGTTCCATCTGCCAAGCAATACATTTGTGGGGCCACATCTGTCCAGACAAGGCACAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS CCA 90 bp GCAAGTCCATTTCTAATTTGCCTCTGTGCCTTGTCTGGACAGATGTaGCCCCACAAATGTATTGCTTGGCAGATGGAACTTGAGCCATGT +
Preference number: 5 (lower is better)
Translates to: ASPFLICLCALSGQM*PHKCIAWQMELEPC
Trigger: ACATGGCTCAAGTTCCATCTGCCAAGCAATACATTTGTGGGGCCACATCTGTCCAGACAAGGCACAGAGGCAAATTAGAAATGGACTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS-3UTR CAA 90 bp GAGAAAAACTCCAACCTGCTTTATGTAGAAAGGGCAGAGGTCAGGGGAGGGAAAAATATCTCCAGGATCTaGATCTTGCGGCTATGCAGG +
Preference number: 5 (lower is better)
Translates to: EKNSNLLYVERAEVRGGKNISRI*ILRLCR
Trigger: CCTGCATAGCCGCAAGATCAAGATCCTGGAGATATT...TTTCCCTCCCCTGACCTCTGCCCTTTCTACATAAAGCAGGTTGGAGTTTTTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CAA 90 bp GAAATAGTCAAAAACTGCACGTCATTCCTTGGACACATCTACCCTCTGAGACACTCCATGGTGATGGTGTaGTGCTTCCCAAGAGAGCTG +
Preference number: 5 (lower is better)
Translates to: EIVKNCTSFLGHIYPLRHSMVMV*CFPREL
Trigger: CAGCTCTCTTGGGAAGCACAACACCATCACCATGGA...GTGTCTCAGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CAA 90 bp CAGGGGAGGGAAATAGTCAAAAACTGCACGTCATTCCTTGGACACATCTACCCTACAGAGCTTCCAGCATaGCAGGTAGACCAGAAAGTT +
Preference number: 5 (lower is better)
Translates to: QGREIVKNCTSFLGHIYPTELPA*QVDQKV
Trigger: AACTTTCTGGTCTACCTGCAATGCTGGAAGCTCTGT...AGGGTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATTTCCCTCCCCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS GCA 90 bp ATTCACAGCCAGAGCTTTAGCAAGTCCATTTCTAATTTGCCTCTGTaGCTTGTCTGGACAGATGTGGCCCCACAAATGTATTGCTTGGCA +
Preference number: 5 (lower is better)
Translates to: IHSQSFSKSISNLPL*LVWTDVAPQMYCLA
Trigger: TGCCAAGCAATACATTTGTGGGGCCACATCTGTCCAGACAAGGCACAGAGGCAAATTAGAAATGGACTTGCTAAAGCTCTGGCTGTGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS CCA 90 bp CAGAGCTTTAGCAAGTCCATTTCTAATTTGCCTCTGTGCCTTGTCTaGACAGATGTGGCCCCACAAATGTATTGCTTGGCAGATGGAACT +
Preference number: 5 (lower is better)
Translates to: QSFSKSISNLPLCLV*TDVAPQMYCLADGT
Trigger: AGTTCCATCTGCCAAGCAATACATTTGTGGGGCCACATCTGTCCAGACAAGGCACAGAGGCAAATTAGAAATGGACTTGCTAAAGCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS CCA 90 bp GATCATTCTGCAAGAATGAAGAAGAGCTACTGCAAGAAGAACTACTaGAAGAAGGCACCCCTGCCAAGACGCTCAAACTCTTGCCTCTTT +
Preference number: 5 (lower is better)
Translates to: DHSARMKKSYCKKNY*KKAPLPRRSNSCLF
Trigger: AAAGAGGCAAGAGTTTGAGCGTCTTGGCAGGGGTGCCTTCTTCCAGTAGTTCTTCTTGCAGTAGCTCTTCTTCATTCTTGCAGAATGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS-3UTR CAA 90 bp GAAATAGTCAAAAACTGCACGTCATTCCTTGGACACATCTACCCTCTGAGACACACGGGAGCATTTTCATaGATGGGAGTCTTAGACGGG +
Preference number: 5 (lower is better)
Translates to: EIVKNCTSFLGHIYPLRHTGAFS*MGVLDG
Trigger: CCCGTCTAAGACTCCCATCAATGAAAATGCTCCCGT...GTGTCTCAGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGACTATTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CAA 90 bp GTCAAAAACTGCACGTCATTCCTTGGACACATCTACCCTCTGAGACACTGGACAATCTGGAAAATGATCTaGTCTCCTGGGTACAGCAAG +
Preference number: 5 (lower is better)
Translates to: VKNCTSFLGHIYPLRHWTIWKMI*SPGYSK
Trigger: CTTGCTGTACCCAGGAGACAAGATCATTTTCCAGAT...TGTCCAGTGTCTCAGAGGGTAGATGTGTCCAAGGAATGACGTGCAGTTTTTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS-3UTR CAA 90 bp GAGAAAAACTCCAACCTGCTTTATGTAGAAAGGGCAGAGGTCAGGGGAGGGAAATTCTTTGGCGTTTTCTaGTCAGTCCTCTTAGACTTG +
Preference number: 5 (lower is better)
Translates to: EKNSNLLYVERAEVRGGKFFGVF*SVLLDL
Trigger: CAAGTCTAAGAGGACTGACAAGAAAACGCCAAAGAA...TTTCCCTCCCCTGACCTCTGCCCTTTCTACATAAAGCAGGTTGGAGTTTTTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS TCA 90 bp AAAATATCTCTGCTGCGAATATGCATCACAGCACACTGTGGTCATTaGAATGACTCACAGCCAGCTACACAGATAATGATAAGCTTGGTA +
Preference number: 5 (lower is better)
Translates to: KISLLRICITAHCGH*NDSQPATQIMISLV
Trigger: TACCAAGCTTATCATTATCTGTGTAGCTGGCTGTGAGTCATTTCAATGACCACAGTGTGCTGTGATGCATATTCGCAGCAGAGATATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS TCA 90 bp ATAACAAAAAGGCACAAAGAGTATCAGAGGGAAAGCAGCCCAACTTaGGGTGACCTTAAAAATGTGCTGGACATAAAGGAGATTACTACT +
Preference number: 5 (lower is better)
Translates to: ITKRHKEYQRESSPT*GDLKNVLDIKEITT
Trigger: AGTAGTAATCTCCTTTATGTCCAGCACATTTTTAAGGTCACCTCAAGTTGGGCTGCTTTCCCTCTGATACTCTTTGTGCCTTTTTGTTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS CCA 90 bp ACAAGAATTTTATCAATAAGCTATGGATTAATAGTGAGGAGGCCTTaGACCCACACACACATAAATGTCTCTGGAAAGGCTTGCCATTTG +
Preference number: 5 (lower is better)
Translates to: TRILSISYGLIVRRP*THTHINVSGKACHL
Trigger: CAAATGGCAAGCCTTTCCAGAGACATTTATGTGTGTGTGGGTCCAAGGCCTCCTCACTATTAATCCATAGCTTATTGATAAAATTCTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS CCA 90 bp CATGTGCTAATTCTGGTTCTGAACAAGAATTTTATCAATAAGCTATaGATTAATAGTGAGGAGGCCTTGGACCCACACACACATAAATGT +
Preference number: 5 (lower is better)
Translates to: HVLILVLNKNFINKL*INSEEALDPHTHKC
Trigger: ACATTTATGTGTGTGTGGGTCCAAGGCCTCCTCACTATTAATCCATAGCTTATTGATAAAATTCTTGTTCAGAACCAGAATTAGCACATG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS CCA 72 bp CTGGGTTCCCAGCCACTTCCTGGCCCACCCCGGGGCTaGAAGGAAGTCACAGCCCGTGTCATGGCCAGGACC +
Preference number: 6 (lower is better)
Translates to: LGSQPLPGPPRG*KEVTARVMART
Trigger: GGTCCTGGCCATGACACGGGCTGTGACTTCCTTCCAGCCCCGGGGTGGGCCAGGAAGTGGCTGGGAACCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514900.5
CDS CAA 90 bp GAGGGGATCGTGAGCTTGTGCTGTCGCTGCCGCTCGCGGTACCGCTaGCCCACTTCCTCCATCTCCTCCAGGGTCATGGGCCGCGTCTCC +
Preference number: 6 (lower is better)
Translates to: EGIVSLCCRCRSRYR*PTSSISSRVMGRVS
Trigger: GGAGACGCGGCCCATGACCCTGGAGGAGATGGAGGAAGTGGGCAAGCGGTACCGCGAGCGGCAGCGACAGCACAAGCTCACGATCCCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326085.7
ENST00000503498.1
ENST00000505956.6
ENST00000514900.5
CDS GCA 72 bp TCATGGTATCCGGCCAGCTGGGCTCTCCTCCTCCCATaGCGCGCCCCTGCCTCTGCAGGGATGCTGCCTTGT +
Preference number: 6 (lower is better)
Translates to: SWYPASWALLLP*RAPASAGMLPC
Trigger: ACAAGGCAGCATCCCTGCAGAGGCAGGGGCGCGGCATGGGAGGAGGAGAGCCCAGCTGGCCGGATACCATGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514900.5
CDS CCA 72 bp GCTGGGGCACCATCTGGCGGGACAGCCGGGAGAGCCTaGGGGCTTTCTTCTGGAAGAGGTGAGAGGGTAGGG +
Preference number: 6 (lower is better)
Translates to: AGAPSGGTAGRA*GLSSGRGERVG
Trigger: CCCTACCCTCTCACCTCTTCCAGAAGAAAGCCCCCAGGCTCTCCCGGCTGTCCCGCCAGATGGTGCCCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514900.5
CDS CCA 72 bp AGGGCTGCCCCCTGTTCTCTGCAGGGCCCTGACACCTaGCTGGGGATTTGTGAAGGCCCTCGCTCCAGCCCT +
Preference number: 6 (lower is better)
Translates to: RAAPCSLQGPDT*LGICEGPRSSP
Trigger: AGGGCTGGAGCGAGGGCCTTCACAAATCCCCAGCCAGGTGTCAGGGCCCTGCAGAGAACAGGGGGCAGCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514900.5
CDS GCA 72 bp TGGGAGCTGAGGCCAGCAGGCCATGATCCTGAGACATaGGCCAAGGGTGACCCGGGACTGGCCAGTCTGCAG +
Preference number: 6 (lower is better)
Translates to: WELRPAGHDPET*AKGDPGLASLQ
Trigger: CTGCAGACTGGCCAGTCCCGGGTCACCCTTGGCGCATGTCTCAGGATCATGGCCTGCTGGCCTCAGCTCCCA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514900.5
CDS GCA 72 bp CGCCCCTGCCTCTGCAGGGATGCTGCCTTGTTCCTCTaGAGTCACCCACGGATGCTGCCCACGGGTTGTCAC +
Preference number: 6 (lower is better)
Translates to: RPCLCRDAALFL*SHPRMLPTGCH
Trigger: GTGACAACCCGTGGGCAGCATCCGTGGGTGACTGCAGAGGAACAAGGCAGCATCCCTGCAGAGGCAGGGGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514900.5
CDS CCA 72 bp CTGCCCCCTGTTCTCTGCAGGGCCCTGACACCTGGCTaGGGATTTGTGAAGGCCCTCGCTCCAGCCCTGTTC +
Preference number: 6 (lower is better)
Translates to: LPPVLCRALTPG*GFVKALAPALF
Trigger: GAACAGGGCTGGAGCGAGGGCCTTCACAAATCCCCAGCCAGGTGTCAGGGCCCTGCAGAGAACAGGGGGCAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514900.5
CDS TCA 72 bp TGCGCCAAGGGTGACCCGGGACTGGCCAGTCTGCAGTaGGCAGTCAGGTTGGGGGATGTTGCCCTAGGATGC +
Preference number: 6 (lower is better)
Translates to: CAKGDPGLASLQ*AVRLGDVALGC
Trigger: GCATCCTAGGGCAACATCCCCCAACCTGACTGCTCACTGCAGACTGGCCAGTCCCGGGTCACCCTTGGCGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000514900.5
CDS GCA 72 bp GGAGGCACAGGATGGGGAGGGGTACGCACGCTCCCTTaGAGTGGCCAGGCTGCTCCTTTGCTGAGCCATAGA +
Preference number: 6 (lower is better)
Translates to: GGTGWGGVRTLP*SGQAAPLLSHR
Trigger: TCTATGGCTCAGCAAAGGAGCAGCCTGGCCACTGCAAGGGAGCGTGCGTACCCCTCCCCATCCTGTGCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS GCA 72 bp CTTCCACCTGGGGTGGACCCTGACTCTGTGCCTCCATaGTCCAGGGGAACACAGTGGGCTTGGGTCAGCTGG +
Preference number: 6 (lower is better)
Translates to: LPPGVDPDSVPP*SRGTQWAWVSW
Trigger: CCAGCTGACCCAAGCCCACTGTGTTCCCCTGGAGCATGGAGGCACAGAGTCAGGGTCCACCCCAGGTGGAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514900.5
CDS CCA 72 bp GGCCCCTGGCCCAGGAAGGCTGGGTCCGGCAACACCTaGCTAGCTCTAGTTGATGTAGTACACCTTGGCGGC +
Preference number: 6 (lower is better)
Translates to: GPWPRKAGSGNT*LALVDVVHLGG
Trigger: GCCGCCAAGGTGTACTACATCAACTAGAGCTAGCCAGGTGTTGCCGGACCCAGCCTTCCTGGGCCAGGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326085.7
ENST00000503498.1
ENST00000505956.6
ENST00000514900.5
CDS CCA 72 bp ACCTCTTGCCAGAGAAGGGGTGTGGCCGCTGCAAGGTaGCAGGGCAGAGAAAGGGCTGCCCCCTGTTCTCTG +
Preference number: 6 (lower is better)
Translates to: TSCQRRGVAAAR*QGRERAAPCSL
Trigger: CAGAGAACAGGGGGCAGCCCTTTCTCTGCCCTGCCACCTTGCAGCGGCCACACCCCTTCTCTGGCAAGAGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000514900.5
CDS CCA 72 bp TGTGTCCCACTGCAGGCATTCTGGCCACACACCCAGTaGGCAGCTGGCAGGGGTCTAGAAGCAGGGGCAGGT +
Preference number: 6 (lower is better)
Translates to: CVPLQAFWPHTQ*AAGRGLEAGAG
Trigger: ACCTGCCCCTGCTTCTAGACCCCTGCCAGCTGCCCACTGGGTGTGTGGCCAGAATGCCTGCAGTGGGACACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514900.5
CDS GCA 72 bp GAGCCTGGGGGCTTTCTTCCTGGTGGTCCTGGTAGTTaGCTGGGAGGCATTTGGCTGGGCACTCTGCTCCTC +
Preference number: 6 (lower is better)
Translates to: EPGGFLPGGPGS*LGGIWLGTLLL
Trigger: GAGGAGCAGAGTGCCCAGCCAAATGCCTCCCAGGCAACTACCAGGACCACCAGGAAGAAAGCCCCCAGGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326085.7
ENST00000503498.1
ENST00000505956.6
CDS GCA 72 bp TCCATCTCCTCCAGGGTCATGGGCCGCGTCTCCATCTaGGTGTCGACTGCAGGCACCGTCAGTAGGTCCACT +
Preference number: 6 (lower is better)
Translates to: SISSRVMGRVSI*VSTAGTVSRST
Trigger: AGTGGACCTACTGACGGTGCCTGCAGTCGACACGCAGATGGAGACGCGGCCCATGACCCTGGAGGAGATGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326085.7
ENST00000503498.1
ENST00000505956.6
ENST00000514900.5
CDS CCA 72 bp CTGGGGGCTTTCTTCCTGGTGGTCCTGGTAGTTGCCTaGGAGGCATTTGGCTGGGCACTCTGCTCCTCGTGG +
Preference number: 6 (lower is better)
Translates to: LGAFFLVVLVVA*EAFGWALCSSW
Trigger: CCACGAGGAGCAGAGTGCCCAGCCAAATGCCTCCCAGGCAACTACCAGGACCACCAGGAAGAAAGCCCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326085.7
ENST00000503498.1
ENST00000505956.6
CDS TCA 72 bp TCCTTGCGAGGCACCATGATGATTCGCCGGCGGGTCTaGGGCAGGCGGAAGTCCTTCTGCTGGAACTGCTTG +
Preference number: 6 (lower is better)
Translates to: SLRGTMMIRRRV*GRRKSFCWNCL
Trigger: CAAGCAGTTCCAGCAGAAGGACTTCCGCCTGCCTCAGACCCGCCGGCGAATCATCATGGTGCCTCGCAAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS TCA 72 bp TGGCTGGGTAGACATGGGGCTGGTGTTGAACACAACTaGAGAGCGCCAGGCTCCGGTCTGTGGCCACAGTGG +
Preference number: 6 (lower is better)
Translates to: WLGRHGAGVEHN*RAPGSGLWPQW
Trigger: CCACTGTGGCCACAGACCGGAGCCTGGCGCTCTTCAGTTGTGTTCAACACCAGCCCCATGTCTACCCAGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326085.7
ENST00000503498.1
ENST00000505956.6
ENST00000514900.5
CDS GCA 72 bp TCCCTCATATCCCCGTGGATGGTGGACGGGAGGCAGTaGTCATCAAAGTGCCGATTCCCACAGCGCACCAGG +
Preference number: 6 (lower is better)
Translates to: SLISPWMVDGRQ*SSKCRFPQRTR
Trigger: CCTGGTGCGCTGTGGGAATCGGCACTTTGATGAGCACTGCCTCCCGTCCACCATCCACGGGGATATGAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326085.7
ENST00000503498.1
ENST00000505956.6
ENST00000514900.5
CDS GCA 72 bp GGGCTACAAGGCCCTGCTGTACCATCTGGCCTCAGCTaGCTTCCCACCTGGTCCATGGCATACCATTCACCC +
Preference number: 6 (lower is better)
Translates to: GLQGPAVPSGLS*LPTWSMAYHSP
Trigger: GGGTGAATGGTATGCCATGGACCAGGTGGGAAGGCAGCTGAGGCCAGATGGTACAGCAGGGCCTTGTAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS GCA 72 bp GAAGGAGGGACTAAGAGGGTGCCCAGCCACGGAACCTaGCAAGCAGTTATCCAGTGTCACCCAGCAGGCACC +
Preference number: 6 (lower is better)
Translates to: EGGTKRVPSHGT*QAVIQCHPAGT
Trigger: GGTGCCTGCTGGGTGACACTGGATAACTGCTTGGCAGGTTCCGTGGCTGGGCACCCTCTTAGTCCCTCCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS CCA 72 bp CCAAAGGACTCTAGCTCCTGCCGCAGCTTCGACCTCTaGCTCAGCCAGGTCTTCCTGTCCTCTGGCTGCTCT +
Preference number: 6 (lower is better)
Translates to: PKDSSSCRSFDL*LSQVFLSSGCS
Trigger: AGAGCAGCCAGAGGACAGGAAGACCTGGCTGAGCCAGAGGTCGAAGCTGCGGCAGGAGCTAGAGTCCTTTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326085.7
ENST00000503498.1
ENST00000505956.6
CDS CCA 72 bp TCTGTGCCTCCATGCTCCAGGGGAACACAGTGGGCTTaGGTCAGCTGGACCTACCCTCAGAATCTGGCCAGG +
Preference number: 6 (lower is better)
Translates to: SVPPCSRGTQWA*VSWTYPQNLAR
Trigger: CCTGGCCAGATTCTGAGGGTAGGTCCAGCTGACCCAAGCCCACTGTGTTCCCCTGGAGCATGGAGGCACAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514900.5
CDS CAA 72 bp CTCTGTGCCTCCATGCTCCAGGGGAACACAGTGGGCTaGGGTCAGCTGGACCTACCCTCAGAATCTGGCCAG +
Preference number: 6 (lower is better)
Translates to: LCASMLQGNTVG*GQLDLPSESGQ
Trigger: CTGGCCAGATTCTGAGGGTAGGTCCAGCTGACCCAAGCCCACTGTGTTCCCCTGGAGCATGGAGGCACAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514900.5
CDS TCA 72 bp GGTAGACCAGAAAGTTGTGCCTGCGGGCCGAGTCAATaGGCTCCCTCATATCCCCGTGGATGGTGGACGGGA +
Preference number: 6 (lower is better)
Translates to: GRPESCACGPSQ*APSYPRGWWTG
Trigger: TCCCGTCCACCATCCACGGGGATATGAGGGAGCTCATTGACTCGGCCCGCAGGCACAACTTTCTGGTCTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326085.7
ENST00000503498.1
ENST00000505956.6
ENST00000514900.5
CDS GCA 72 bp TGGCGTCCCTTACTGCACCAACCCCAGCCCTCTGGTTaGCATTCTCGTCCTGTCACCCTGTCTCACCAAGCA +
Preference number: 6 (lower is better)
Translates to: WRPLLHQPQPSG*HSRPVTLSHQA
Trigger: TGCTTGGTGAGACAGGGTGACAGGACGAGAATGGCAACCAGAGGGCTGGGGTTGGTGCAGTAAGGGACGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS GCA 72 bp GCCCTCCTCTCCATCTCCACTAATGGCGTCCCTTACTaGACCAACCCCAGCCCTCTGGTTGCCATTCTCGTC +
Preference number: 6 (lower is better)
Translates to: ALLSISTNGVPY*TNPSPLVAILV
Trigger: GACGAGAATGGCAACCAGAGGGCTGGGGTTGGTGCAGTAAGGGACGCCATTAGTGGAGATGGAGAGGAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS GCA 72 bp GGGATGCTGCCTTGTTCCTCTGCAGTCACCCACGGATaGTGCCCACGGGTTGTCACCTGCTGCTTGACTCAA +
Preference number: 6 (lower is better)
Translates to: GMLPCSSAVTHG*CPRVVTCCLTQ
Trigger: TTGAGTCAAGCAGCAGGTGACAACCCGTGGGCAGCATCCGTGGGTGACTGCAGAGGAACAAGGCAGCATCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514900.5
CDS CCA 72 bp GACTGTGGTACGCTTCATAGTCGTCGTCCATGGTCGTaGTGCTGGGAGGGGGTGCTGAAGGGCGTGTGTGAA +
Preference number: 6 (lower is better)
Translates to: DCGTLHSRRPWS*CWEGVLKGVCE
Trigger: TTCACACACGCCCTTCAGCACCCCCTCCCAGCACCACGACCATGGACGACGACTATGAAGCGTACCACAGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000326085.7
ENST00000503957.1
ENST00000505956.6
CDS CCA 72 bp GCCTGGGAGGCATTTGGCTGGGCACTCTGCTCCTCGTaGATCATGTGTAAGACCTTGGCCTCTGAAGGCGTG +
Preference number: 6 (lower is better)
Translates to: AWEAFGWALCSS*IMCKTLASEGV
Trigger: CACGCCTTCAGAGGCCAAGGTCTTACACATGATCCACGAGGAGCAGAGTGCCCAGCCAAATGCCTCCCAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326085.7
ENST00000503498.1
ENST00000505956.6
CDS CCA 72 bp GCGTGTCGACTGCAGGCACCGTCAGTAGGTCCACTTTaGGAAGCTGTGGGGCTGAATCCACCTCCTGCTTCT +
Preference number: 6 (lower is better)
Translates to: ACRLQAPSVGPL*EAVGLNPPPAS
Trigger: AGAAGCAGGAGGTGGATTCAGCCCCACAGCTTCCCAAAGTGGACCTACTGACGGTGCCTGCAGTCGACACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326085.7
ENST00000503498.1
ENST00000505956.6
ENST00000514900.5
CDS CCA 72 bp CCTGACTCTGTGCCTCCATGCTCCAGGGGAACACAGTaGGCTTGGGTCAGCTGGACCTACCCTCAGAATCTG +
Preference number: 6 (lower is better)
Translates to: PDSVPPCSRGTQ*AWVSWTYPQNL
Trigger: CAGATTCTGAGGGTAGGTCCAGCTGACCCAAGCCCACTGTGTTCCCCTGGAGCATGGAGGCACAGAGTCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514900.5
CDS CAA 72 bp TGCGTGTCGACTGCAGGCACCGTCAGTAGGTCCACTTaGGGAAGCTGTGGGGCTGAATCCACCTCCTGCTTC +
Preference number: 6 (lower is better)
Translates to: CVSTAGTVSRST*GSCGAESTSCF
Trigger: GAAGCAGGAGGTGGATTCAGCCCCACAGCTTCCCAAAGTGGACCTACTGACGGTGCCTGCAGTCGACACGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326085.7
ENST00000503498.1
ENST00000505956.6
ENST00000514900.5
CDS CAA 90 bp GTCTCCATCTGCGTGTCGACTGCAGGCACCGTCAGTAGGTCCACTTaGGGAAGCTGTGGGGCTGAATCCACCTCCTGCTTCTTGAGCGGA +
Preference number: 6 (lower is better)
Translates to: VSICVSTAGTVSRST*GSCGAESTSCFLSG
Trigger: TCCGCTCAAGAAGCAGGAGGTGGATTCAGCCCCACAGCTTCCCAAAGTGGACCTACTGACGGTGCCTGCAGTCGACACGCAGATGGAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326085.7
ENST00000503498.1
ENST00000505956.6
ENST00000514900.5
CDS CAA 90 bp TGGGGAGGGGTACGCACGCTCCCTTGCAGTGGCCAGGCTGCTCCTTaGCTGAGCCATAGACCACTGCTTGTAGGTATTGGCCAGGATATC +
Preference number: 6 (lower is better)
Translates to: WGGVRTLPCSGQAAP*LSHRPLLVGIGQDI
Trigger: GATATCCTGGCCAATACCTACAAGCAGTGGTCTATGGCTCAGCAAAGGAGCAGCCTGGCCACTGCAAGGGAGCGTGCGTACCCCTCCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS CAA 90 bp GCAGTGCTCATCAAAGTGCCGATTCCCACAGCGCACCAGGTGACATaGCTCCGTGTACTGGATGGAGGGGATCGTGAGCTTGTGCTGTCG +
Preference number: 6 (lower is better)
Translates to: AVLIKVPIPTAHQVT*LRVLDGGDRELVLS
Trigger: CGACAGCACAAGCTCACGATCCCCTCCATCCAGTACACGGAGCAATGTCACCTGGTGCGCTGTGGGAATCGGCACTTTGATGAGCACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326085.7
ENST00000503498.1
ENST00000505956.6
ENST00000514900.5
CDS TCA 72 bp TGGGAAGCTGTGGGGCTGAATCCACCTCCTGCTTCTTaGGCGGACCCTTCAGGGAATCTCTGTGCTTGGCCA +
Preference number: 6 (lower is better)
Translates to: WEAVGLNPPPAS*ADPSGNLCAWP
Trigger: TGGCCAAGCACAGAGATTCCCTGAAGGGTCCGCTCAAGAAGCAGGAGGTGGATTCAGCCCCACAGCTTCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326085.7
ENST00000503498.1
ENST00000503957.1
ENST00000505956.6
ENST00000514900.5
CDS TCA 72 bp CAGGCACAGAGGGAGGTCGGGGGAAAGTCTCTTGGGTaGCTGCCAAACTTCACCCTCATACAATGGGCCCCA +
Preference number: 6 (lower is better)
Translates to: QAQREVGGKSLG*LPNFTLIQWAP
Trigger: TGGGGCCCATTGTATGAGGGTGAAGTTTGGCAGTCACCCAAGAGACTTTCCCCCGACCTCCCTCTGTGCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS GCA 72 bp GTCACCCACGGATGCTGCCCACGGGTTGTCACCTGCTaGTTGACTCAAATCTGGGTAGCTCAGGCTTTGGAG +
Preference number: 6 (lower is better)
Translates to: VTHGCCPRVVTC*LTQIWVAQALE
Trigger: CTCCAAAGCCTGAGCTACCCAGATTTGAGTCAAGCAGCAGGTGACAACCCGTGGGCAGCATCCGTGGGTGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514900.5
CDS GCA 72 bp GCAGTCACCCACGGATGCTGCCCACGGGTTGTCACCTaGTGCTTGACTCAAATCTGGGTAGCTCAGGCTTTG +
Preference number: 6 (lower is better)
Translates to: AVTHGCCPRVVT*CLTQIWVAQAL
Trigger: CAAAGCCTGAGCTACCCAGATTTGAGTCAAGCAGCAGGTGACAACCCGTGGGCAGCATCCGTGGGTGACTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514900.5
CDS CCA 72 bp CTGGTGGTCCTGGTAGTTGCCTGGGAGGCATTTGGCTaGGCACTCTGCTCCTCGTGGATCATGTGTAAGACC +
Preference number: 6 (lower is better)
Translates to: LVVLVVAWEAFG*ALCSSWIMCKT
Trigger: GGTCTTACACATGATCCACGAGGAGCAGAGTGCCCAGCCAAATGCCTCCCAGGCAACTACCAGGACCACCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326085.7
ENST00000503498.1
ENST00000505956.6
CDS CCA 72 bp CTCAGCTTGTCAGTCCTCTTAGACTTGCCAGGGCCCTaGGACCGGAGCAGAGCCAGATTCGGAGAAAAGACC +
Preference number: 6 (lower is better)
Translates to: LSLSVLLDLPGP*DRSRARFGEKT
Trigger: GGTCTTTTCTCCGAATCTGGCTCTGCTCCGGTCCCAGGGCCCTGGCAAGTCTAAGAGGACTGACAAGCTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000514900.5
CDS CAA 72 bp TTGGGAAGCTGTGGGGCTGAATCCACCTCCTGCTTCTaGAGCGGACCCTTCAGGGAATCTCTGTGCTTGGCC +
Preference number: 6 (lower is better)
Translates to: LGSCGAESTSCF*SGPFRESLCLA
Trigger: GGCCAAGCACAGAGATTCCCTGAAGGGTCCGCTCAAGAAGCAGGAGGTGGATTCAGCCCCACAGCTTCCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326085.7
ENST00000503498.1
ENST00000503957.1
ENST00000505956.6
ENST00000514900.5
CDS CAA 72 bp GTACGCACGCTCCCTTGCAGTGGCCAGGCTGCTCCTTaGCTGAGCCATAGACCACTGCTTGTAGGTATTGGC +
Preference number: 6 (lower is better)
Translates to: VRTLPCSGQAAP*LSHRPLLVGIG
Trigger: GCCAATACCTACAAGCAGTGGTCTATGGCTCAGCAAAGGAGCAGCCTGGCCACTGCAAGGGAGCGTGCGTAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS CAA 72 bp CCATTCCACCCAGCCACCCTGACCACCTTCTGTCTCTaGCAAGCTATCCTACCCCAGGGCCTTTGCCTTCAC +
Preference number: 6 (lower is better)
Translates to: PFHPATLTTFCL*QAILPQGLCLH
Trigger: GTGAAGGCAAAGGCCCTGGGGTAGGATAGCTTGCAAGAGACAGAAGGTGGTCAGGGTGGCTGGGTGGAATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS CAA 90 bp GTCCTCTGTCAGCGGGAGGCCATAGGACTTACAGAGCTTCCAGCATaGCAGGTAGACCAGAAAGTTGTGCCTGCGGGCCGAGTCAATGAG +
Preference number: 6 (lower is better)
Translates to: VLCQREAIGLTELPA*QVDQKVVPAGRVNE
Trigger: CTCATTGACTCGGCCCGCAGGCACAACTTTCTGGTCTACCTGCAATGCTGGAAGCTCTGTAAGTCCTATGGCCTCCCGCTGACAGAGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326085.7
ENST00000503498.1
ENST00000505956.6
ENST00000514900.5
CDS CAA 90 bp AAACCACAGTCGGCCAAAACTGGGGAACACACTGAGGAAGTGAGTTaGGAGGAGAGGCCAAGGCTGCCTGCACCATGCTTGCTCCCAGGA +
Preference number: 6 (lower is better)
Translates to: KPQSAKTGEHTEEVS*EERPRLPAPCLLPG
Trigger: TCCTGGGAGCAAGCATGGTGCAGGCAGCCTTGGCCTCTCCTCCAAACTCACTTCCTCAGTGTGTTCCCCAGTTTTGGCCGACTGTGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS CAA 90 bp TCTGCAGTCACCCACGGATGCTGCCCACGGGTTGTCACCTGCTGCTaGACTCAAATCTGGGTAGCTCAGGCTTTGGAGTACCAAAGGAGG +
Preference number: 6 (lower is better)
Translates to: SAVTHGCCPRVVTCC*TQIWVAQALEYQRR
Trigger: CCTCCTTTGGTACTCCAAAGCCTGAGCTACCCAGATTTGAGTCAAGCAGCAGGTGACAACCCGTGGGCAGCATCCGTGGGTGACTGCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514900.5
CDS TCA 72 bp TGCTCATCAAAGTGCCGATTCCCACAGCGCACCAGGTaGCATTGCTCCGTGTACTGGATGGAGGGGATCGTG +
Preference number: 6 (lower is better)
Translates to: CSSKCRFPQRTR*HCSVYWMEGIV
Trigger: CACGATCCCCTCCATCCAGTACACGGAGCAATGTCACCTGGTGCGCTGTGGGAATCGGCACTTTGATGAGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326085.7
ENST00000503498.1
ENST00000505956.6
ENST00000514900.5
CDS GCA 72 bp AGCCACCTCTTTACATCACCAAAGGACTCTAGCTCCTaGCGCAGCTTCGACCTCTGGCTCAGCCAGGTCTTC +
Preference number: 6 (lower is better)
Translates to: SHLFTSPKDSSS*RSFDLWLSQVF
Trigger: GAAGACCTGGCTGAGCCAGAGGTCGAAGCTGCGGCAGGAGCTAGAGTCCTTTGGTGATGTAAAGAGGTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326085.7
ENST00000503498.1
ENST00000505956.6
CDS GCA 72 bp TCCACTTTGGGAAGCTGTGGGGCTGAATCCACCTCCTaGTTCTTGAGCGGACCCTTCAGGGAATCTCTGTGC +
Preference number: 6 (lower is better)
Translates to: STLGSCGAESTS*FLSGPFRESLC
Trigger: GCACAGAGATTCCCTGAAGGGTCCGCTCAAGAAGCAGGAGGTGGATTCAGCCCCACAGCTTCCCAAAGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000326085.7
ENST00000503498.1
ENST00000503957.1
ENST00000505956.6
ENST00000514900.5
CDS GCA 72 bp CCCCAGATCTTTACCATTGTTAGGAAACCCCTCCACTaGCTCCTCCAGGGCTCCTGTGTGACTCAGGGAGGA +
Preference number: 6 (lower is better)
Translates to: PQIFTIVRKPLH*LLQGSCVTQGG
Trigger: TCCTCCCTGAGTCACACAGGAGCCCTGGAGGAGGCAGTGGAGGGGTTTCCTAACAATGGTAAAGATCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS GCA 72 bp ATGCTGCCTTGTTCCTCTGCAGTCACCCACGGATGCTaGCCACGGGTTGTCACCTGCTGCTTGACTCAAATC +
Preference number: 6 (lower is better)
Translates to: MLPCSSAVTHGC*PRVVTCCLTQI
Trigger: GATTTGAGTCAAGCAGCAGGTGACAACCCGTGGGCAGCATCCGTGGGTGACTGCAGAGGAACAAGGCAGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514900.5
CDS CCA 72 bp TTTGGGTCAGTTCTCAGCCTCTCAGGTGGGCTCTGGTaGGCTGAGTATCCTCCTCTAAGAACAAGGGCTGGG +
Preference number: 6 (lower is better)
Translates to: FGSVLSLSGGLW*AEYPPLRTRAG
Trigger: CCCAGCCCTTGTTCTTAGAGGAGGATACTCAGCCCACCAGAGCCCACCTGAGAGGCTGAGAACTGACCCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS CCA 72 bp AGCTCAGGCACAGAGGGAGGTCGGGGGAAAGTCTCTTaGGTGACTGCCAAACTTCACCCTCATACAATGGGC +
Preference number: 6 (lower is better)
Translates to: SSGTEGGRGKVS*VTAKLHPHTMG
Trigger: GCCCATTGTATGAGGGTGAAGTTTGGCAGTCACCCAAGAGACTTTCCCCCGACCTCCCTCTGTGCCTGAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS CCA 72 bp CCACAGCATTTAGACCAAAACCCAGAGTCCTCTCCCTaGGCTACAAGGCCCTGCTGTACCATCTGGCCTCAG +
Preference number: 6 (lower is better)
Translates to: PQHLDQNPESSP*ATRPCCTIWPQ
Trigger: CTGAGGCCAGATGGTACAGCAGGGCCTTGTAGCCCAGGGAGAGGACTCTGGGTTTTGGTCTAAATGCTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS CAA 72 bp CAGCTCAGGCACAGAGGGAGGTCGGGGGAAAGTCTCTaGGGTGACTGCCAAACTTCACCCTCATACAATGGG +
Preference number: 6 (lower is better)
Translates to: QLRHRGRSGESL*GDCQTSPSYNG
Trigger: CCCATTGTATGAGGGTGAAGTTTGGCAGTCACCCAAGAGACTTTCCCCCGACCTCCCTCTGTGCCTGAGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS CAA 72 bp ACCCACGGATGCTGCCCACGGGTTGTCACCTGCTGCTaGACTCAAATCTGGGTAGCTCAGGCTTTGGAGTAC +
Preference number: 6 (lower is better)
Translates to: THGCCPRVVTCC*TQIWVAQALEY
Trigger: GTACTCCAAAGCCTGAGCTACCCAGATTTGAGTCAAGCAGCAGGTGACAACCCGTGGGCAGCATCCGTGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514900.5
CDS CAA 90 bp GAGGAGGCCTTGGACCCACACACACATAAATGTCTCTGGAAAGGCTaGCCATTTGGGTCAGTTCTCAGCCTCTCAGGTGGGCTCTGGTGG +
Preference number: 6 (lower is better)
Translates to: EEALDPHTHKCLWKG*PFGSVLSLSGGLWW
Trigger: CCACCAGAGCCCACCTGAGAGGCTGAGAACTGACCCAAATGGCAAGCCTTTCCAGAGACATTTATGTGTGTGTGGGTCCAAGGCCTCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS CAA 90 bp ACCCTTCACCCATTCCACCCAGCCACCCTGACCACCTTCTGTCTCTaGCAAGCTATCCTACCCCAGGGCCTTTGCCTTCACAGTTCTATC +
Preference number: 6 (lower is better)
Translates to: TLHPFHPATLTTFCL*QAILPQGLCLHSSI
Trigger: GATAGAACTGTGAAGGCAAAGGCCCTGGGGTAGGATAGCTTGCAAGAGACAGAAGGTGGTCAGGGTGGCTGGGTGGAATGGGTGAAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS TCA 72 bp TACCATTCACCCTTCACCCATTCCACCCAGCCACCCTaGCCACCTTCTGTCTCTTGCAAGCTATCCTACCCC +
Preference number: 6 (lower is better)
Translates to: YHSPFTHSTQPP*PPSVSCKLSYP
Trigger: GGGGTAGGATAGCTTGCAAGAGACAGAAGGTGGTCAGGGTGGCTGGGTGGAATGGGTGAAGGGTGAATGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS GCA 72 bp CTGAAGGGCGTGTGTGAATGTGTGTCGATGTGGGCTTaGTTGCGTAGGGGTACCGGGGTATCAGATAAACCG +
Preference number: 6 (lower is better)
Translates to: LKGVCECVSMWA*LRRGTGVSDKP
Trigger: CGGTTTATCTGATACCCCGGTACCCCTACGCAAGCAAGCCCACATCGACACACATTCACACACGCCCTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326085.7
ENST00000503957.1
ENST00000505956.6
CDS GCA 72 bp TCTCAGGGTAGTTACGAGGGAGGCTCAGTAAGTCACTaGCAAATCCTTTTGGGGTCCCTGGCTCCTACTCCC +
Preference number: 6 (lower is better)
Translates to: SQGSYEGGSVSH*QILLGSLAPTP
Trigger: GGGAGTAGGAGCCAGGGACCCCAAAAGGATTTGGCAGTGACTTACTGAGCCTCCCTCGTAACTACCCTGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000514900.5
CDS CCA 72 bp AGGCGGAAGTCCTTCTGCTGGAACTGCTTGAAGCAGTaGGCAATGACCGGTTCAGGATCAAAGACGGGAGCA +
Preference number: 6 (lower is better)
Translates to: RRKSFCWNCLKQ*AMTGSGSKTGA
Trigger: TGCTCCCGTCTTTGATCCTGAACCGGTCATTGCCCACTGCTTCAAGCAGTTCCAGCAGAAGGACTTCCGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS CCA 72 bp GTTTTCTTGTCAGTCCTCTTAGACTTGCCAGGGCCCTaGGACCGGAGCAGAGCCAGATTCGGAGAAAAGACC +
Preference number: 6 (lower is better)
Translates to: VFLSVLLDLPGP*DRSRARFGEKT
Trigger: GGTCTTTTCTCCGAATCTGGCTCTGCTCCGGTCCCAGGGCCCTGGCAAGTCTAAGAGGACTGACAAGAAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326085.7
ENST00000503498.1
ENST00000505956.6
CDS CCA 72 bp TGCCCACGGGTTGTCACCTGCTGCTTGACTCAAATCTaGGTAGCTCAGGCTTTGGAGTACCAAAGGAGGCCA +
Preference number: 6 (lower is better)
Translates to: CPRVVTCCLTQI*VAQALEYQRRP
Trigger: TGGCCTCCTTTGGTACTCCAAAGCCTGAGCTACCCAGATTTGAGTCAAGCAGCAGGTGACAACCCGTGGGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514900.5
CDS CAA 72 bp ATCAAAGTGCCGATTCCCACAGCGCACCAGGTGACATaGCTCCGTGTACTGGATGGAGGGGATCGTGAGCTT +
Preference number: 6 (lower is better)
Translates to: IKVPIPTAHQVT*LRVLDGGDREL
Trigger: AAGCTCACGATCCCCTCCATCCAGTACACGGAGCAATGTCACCTGGTGCGCTGTGGGAATCGGCACTTTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326085.7
ENST00000503498.1
ENST00000505956.6
ENST00000514900.5
CDS CAA 90 bp CCCGGCTGCCGGATGGGGCACACTTTGTCCATCTGGAAAATGATCTaGTCTCCTGGGTACAGCAAGGCTTTCATGAGGATGTCCTCTGTC +
Preference number: 6 (lower is better)
Translates to: PGCRMGHTLSIWKMI*SPGYSKAFMRMSSV
Trigger: GACAGAGGACATCCTCATGAAAGCCTTGCTGTACCCAGGAGACAAGATCATTTTCCAGATGGACAAAGTGTGCCCCATCCGGCAGCCGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326085.7
ENST00000503498.1
ENST00000505956.6
ENST00000514900.5
CDS GCA 72 bp GTACCGGGGTATCAGATAAACCGTAACTCCAAGTCGTaGGAAAGGCGCTCAGCTCAGACTGCAGAAGCAACC +
Preference number: 6 (lower is better)
Translates to: VPGYQINRNSKS*ERRSAQTAEAT
Trigger: GGTTGCTTCTGCAGTCTGAGCTGAGCGCCTTTCGCACGACTTGGAGTTACGGTTTATCTGATACCCCGGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS GCA 72 bp AGGGCGTGTGTGAATGTGTGTCGATGTGGGCTTGCTTaGGTAGGGGTACCGGGGTATCAGATAAACCGTAAC +
Preference number: 6 (lower is better)
Translates to: RACVNVCRCGLA*VGVPGYQINRN
Trigger: GTTACGGTTTATCTGATACCCCGGTACCCCTACGCAAGCAAGCCCACATCGACACACATTCACACACGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326085.7
ENST00000503957.1
ENST00000505956.6
CDS CCA 72 bp GCAGCTTATCCAGAAGATGACCCGGCCAGAAGGAATTaGGGTGTGTTTGCTGCAGACCACTGGACCTCTTCA +
Preference number: 6 (lower is better)
Translates to: AAYPEDDPARRN*GVFAADHWTSS
Trigger: TGAAGAGGTCCAGTGGTCTGCAGCAAACACACCCCAATTCCTTCTGGCCGGGTCATCTTCTGGATAAGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326085.7
ENST00000503498.1
ENST00000505956.6
ENST00000514900.5
CDS CCA 72 bp TTTAGGTGCAAGCTCATCGAAAGCTGGGGCTTTGGCTaGCCCACTGCTGTGTTCCCAGTTTCTAGAAGTGGC +
Preference number: 6 (lower is better)
Translates to: FRCKLIESWGFG*PTAVFPVSRSG
Trigger: GCCACTTCTAGAAACTGGGAACACAGCAGTGGGCCAGCCAAAGCCCCAGCTTTCGATGAGCTTGCACCTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS CAA 72 bp CTTTTCTTTGGCGTTTTCTTGTCAGTCCTCTTAGACTaGCCAGGGCCCTGGGACCGGAGCAGAGCCAGATTC +
Preference number: 6 (lower is better)
Translates to: LFFGVFLSVLLD*PGPWDRSRARF
Trigger: GAATCTGGCTCTGCTCCGGTCCCAGGGCCCTGGCAAGTCTAAGAGGACTGACAAGAAAACGCCAAAGAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000326085.7
ENST00000503498.1
ENST00000505956.6
CDS CAA 72 bp CAGAAGATGACCCGGCCAGAAGGAATTGGGGTGTGTTaGCTGCAGACCACTGGACCTCTTCACCTTCAGCTT +
Preference number: 6 (lower is better)
Translates to: QKMTRPEGIGVC*LQTTGPLHLQL
Trigger: AAGCTGAAGGTGAAGAGGTCCAGTGGTCTGCAGCAAACACACCCCAATTCCTTCTGGCCGGGTCATCTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326085.7
ENST00000503498.1
ENST00000505956.6
ENST00000514900.5
CDS CAA 72 bp TGTAAACTCCAACGGCCTCACCCCAGATCTTTACCATaGTTAGGAAACCCCTCCACTGCCTCCTCCAGGGCT +
Preference number: 6 (lower is better)
Translates to: CKLQRPHPRSLP*LGNPSTASSRA
Trigger: AGCCCTGGAGGAGGCAGTGGAGGGGTTTCCTAACAATGGTAAAGATCTGGGGTGAGGCCGTTGGAGTTTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS CAA 90 bp CAGTGGGCAATGACCGGTTCAGGATCAAAGACGGGAGCATTTTCATaGATGGGAGTCTTAGACGGGCAGAGTCCGAGCAGCGACAAGAAC +
Preference number: 6 (lower is better)
Translates to: QWAMTGSGSKTGAFS*MGVLDGQSPSSDKN
Trigger: GTTCTTGTCGCTGCTCGGACTCTGCCCGTCTAAGACTCCCATCAATGAAAATGCTCCCGTCTTTGATCCTGAACCGGTCATTGCCCACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS CAA 90 bp CCTGACCACCTTCTGTCTCTTGCAAGCTATCCTACCCCAGGGCCTTaGCCTTCACAGTTCTATCTGCCTAGATTGTGCTTCCCCCAAGAC +
Preference number: 6 (lower is better)
Translates to: PDHLLSLASYPTPGP*PSQFYLPRLCFPQD
Trigger: GTCTTGGGGGAAGCACAATCTAGGCAGATAGAACTGTGAAGGCAAAGGCCCTGGGGTAGGATAGCTTGCAAGAGACAGAAGGTGGTCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS GCA 72 bp TGGAAGAAGGCACCCCTGCCAAGACGCTCAAACTCTTaGCTCTTTAGACAAAGTGAGAGACACCCGGACAGA +
Preference number: 6 (lower is better)
Translates to: WKKAPLPRRSNS*LFRQSERHPDR
Trigger: TCTGTCCGGGTGTCTCTCACTTTGTCTAAAGAGGCAAGAGTTTGAGCGTCTTGGCAGGGGTGCCTTCTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS CCA 72 bp CTTCGACCTCTGGCTCAGCCAGGTCTTCCTGTCCTCTaGCTGCTCTTGGATATCTCTAGCTTCCAGAACTTT +
Preference number: 6 (lower is better)
Translates to: LRPLAQPGLPVL*LLLDISSFQNF
Trigger: AAAGTTCTGGAAGCTAGAGATATCCAAGAGCAGCCAGAGGACAGGAAGACCTGGCTGAGCCAGAGGTCGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS CCA 72 bp GAGGAGGCCTTGGACCCACACACACATAAATGTCTCTaGAAAGGCTTGCCATTTGGGTCAGTTCTCAGCCTC +
Preference number: 6 (lower is better)
Translates to: EEALDPHTHKCL*KGLPFGSVLSL
Trigger: GAGGCTGAGAACTGACCCAAATGGCAAGCCTTTCCAGAGACATTTATGTGTGTGTGGGTCCAAGGCCTCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS CAA 72 bp ATGACCGGTTCAGGATCAAAGACGGGAGCATTTTCATaGATGGGAGTCTTAGACGGGCAGAGTCCGAGCAGC +
Preference number: 6 (lower is better)
Translates to: MTGSGSKTGAFS*MGVLDGQSPSS
Trigger: GCTGCTCGGACTCTGCCCGTCTAAGACTCCCATCAATGAAAATGCTCCCGTCTTTGATCCTGAACCGGTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000326085.7
ENST00000505956.6
CDS CAA 72 bp TGTAAGACCTTGGCCTCTGAAGGCGTGATGCTGGGCTaGTTCTCCAGCCACCTCTTTACATCACCAAAGGAC +
Preference number: 6 (lower is better)
Translates to: CKTLASEGVMLG*FSSHLFTSPKD
Trigger: GTCCTTTGGTGATGTAAAGAGGTGGCTGGAGAACAAGCCCAGCATCACGCCTTCAGAGGCCAAGGTCTTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000326085.7
ENST00000503498.1
ENST00000505956.6
CDS CAA 72 bp GATATAATGCTCCCTTGCAGTGGCCAGGCTGCTCCTTaGCTGAGCCATAGACCACTGCTTGTAGGTATTGGC +
Preference number: 6 (lower is better)
Translates to: DIMLPCSGQAAP*LSHRPLLVGIG
Trigger: GCCAATACCTACAAGCAGTGGTCTATGGCTCAGCAAAGGAGCAGCCTGGCCACTGCAAGGGAGCATTATATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326085.7
ENST00000503957.1
ENST00000505956.6
ENST00000514900.5
CDS CAA 90 bp GTGCTTCCCAAGAGAGCTGAGGTAGATCACTATATCCTCCACCTCTaGGTTCTTCAGAGGGACTCCGACTGCCTTTACAGCCGCGATGAA +
Preference number: 6 (lower is better)
Translates to: VLPKRAEVDHYILHL*VLQRDSDCLYSRDE
Trigger: TTCATCGCGGCTGTAAAGGCAGTCGGAGTCCCTCTGAAGAACCAAGAGGTGGAGGATATAGTGATCTACCTCAGCTCTCTTGGGAAGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326085.7
ENST00000503498.1
ENST00000503957.1
ENST00000505956.6
ENST00000514900.5
CDS CAA 90 bp CTTGGCCAAGATATAATGCTCCCTTGCAGTGGCCAGGCTGCTCCTTaGCTGAGCCATAGACCACTGCTTGTAGGTATTGGCCAGGATATC +
Preference number: 6 (lower is better)
Translates to: LGQDIMLPCSGQAAP*LSHRPLLVGIGQDI
Trigger: GATATCCTGGCCAATACCTACAAGCAGTGGTCTATGGCTCAGCAAAGGAGCAGCCTGGCCACTGCAAGGGAGCATTATATCTTGGCCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000326085.7
ENST00000503957.1
ENST00000505956.6
ENST00000514900.5
CDS CAA 90 bp CAGCTTATCCAGAAGATGACCCGGCCAGAAGGAATTGGGGTGTGTTaGCTGCAGACCACTGGACCTCTTCACCTTCAGCTTCCTGGTAAA +
Preference number: 6 (lower is better)
Translates to: QLIQKMTRPEGIGVC*LQTTGPLHLQLPGK
Trigger: TTTACCAGGAAGCTGAAGGTGAAGAGGTCCAGTGGTCTGCAGCAAACACACCCCAATTCCTTCTGGCCGGGTCATCTTCTGGATAAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000326085.7
ENST00000503498.1
ENST00000505956.6
ENST00000514900.5
CDS GCA 72 bp CTGTGTGACTCAGGGAGGACAAGGAAGCCCCAAACATaGATGAGATTAAGTTCCTGCCAACCTGGTAGATGG +
Preference number: 6 (lower is better)
Translates to: LCDSGRTRKPQT*MRLSSCQPGRW
Trigger: CCATCTACCAGGTTGGCAGGAACTTAATCTCATGCATGTTTGGGGCTTCCTTGTCCTCCCTGAGTCACACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS CAA 72 bp CCTCCTCTAAGAACAAGGGCTGGGACTCATTTGTCTTaGAATGGACACAGTGGTAGCTGGGCACTCAAGGGA +
Preference number: 6 (lower is better)
Translates to: PPLRTRAGTHLS*NGHSGSWALKG
Trigger: TCCCTTGAGTGCCCAGCTACCACTGTGTCCATTCAAAGACAAATGAGTCCCAGCCCTTGTTCTTAGAGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS CAA 90 bp TGGTGGGCTGAGTATCCTCCTCTAAGAACAAGGGCTGGGACTCATTaGTCTTTGAATGGACACAGTGGTAGCTGGGCACTCAAGGGAATA +
Preference number: 6 (lower is better)
Translates to: WWAEYPPLRTRAGTH*SLNGHSGSWALKGI
Trigger: TATTCCCTTGAGTGCCCAGCTACCACTGTGTCCATTCAAAGACAAATGAGTCCCAGCCCTTGTTCTTAGAGGAGGATACTCAGCCCACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS GCA 72 bp TTCTGTCTCTTGCAAGCTATCCTACCCCAGGGCCTTTaGCTTCACAGTTCTATCTGCCTAGATTGTGCTTCC +
Preference number: 6 (lower is better)
Translates to: FCLLQAILPQGL*LHSSICLDCAS
Trigger: GGAAGCACAATCTAGGCAGATAGAACTGTGAAGGCAAAGGCCCTGGGGTAGGATAGCTTGCAAGAGACAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS CCA 72 bp ACTTGGGGGATATGCCTGCAGCTGCAGAAAGATGTATaGAAACAGACACGCAACTCTGCCTCCCAGATAAAC +
Preference number: 6 (lower is better)
Translates to: TWGICLQLQKDV*KQTRNSASQIN
Trigger: GTTTATCTGGGAGGCAGAGTTGCGTGTCTGTTTCCATACATCTTTCTGCAGCTGCAGGCATATCCCCCAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS CAA 72 bp AAGAGAGCTGAGGTAGATCACTATATCCTCCACCTCTaGGTTCTTCAGAGGGACTCCGACTGCCTTTACAGC +
Preference number: 6 (lower is better)
Translates to: KRAEVDHYILHL*VLQRDSDCLYS
Trigger: GCTGTAAAGGCAGTCGGAGTCCCTCTGAAGAACCAAGAGGTGGAGGATATAGTGATCTACCTCAGCTCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000326085.7
ENST00000503498.1
ENST00000503957.1
ENST00000505956.6
ENST00000514900.5
CDS CAA 72 bp CGGATGGGGCACACTTTGTCCATCTGGAAAATGATCTaGTCTCCTGGGTACAGCAAGGCTTTCATGAGGATG +
Preference number: 6 (lower is better)
Translates to: RMGHTLSIWKMI*SPGYSKAFMRM
Trigger: CATCCTCATGAAAGCCTTGCTGTACCCAGGAGACAAGATCATTTTCCAGATGGACAAAGTGTGCCCCATCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000326085.7
ENST00000503498.1
ENST00000505956.6
ENST00000514900.5
CDS CAA 72 bp GAGTATCCTCCTCTAAGAACAAGGGCTGGGACTCATTaGTCTTTGAATGGACACAGTGGTAGCTGGGCACTC +
Preference number: 6 (lower is better)
Translates to: EYPPLRTRAGTH*SLNGHSGSWAL
Trigger: GAGTGCCCAGCTACCACTGTGTCCATTCAAAGACAAATGAGTCCCAGCCCTTGTTCTTAGAGGAGGATACTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS CAA 90 bp CTGGACAGATGTGGCCCCACAAATGTATTGCTTGGCAGATGGAACTaGAGCCATGTACAACCTTTACAACTGTTGACAGCAACCCTGCCA +
Preference number: 6 (lower is better)
Translates to: LDRCGPTNVLLGRWN*SHVQPLQLLTATLP
Trigger: TGGCAGGGTTGCTGTCAACAGTTGTAAAGGTTGTACATGGCTCAAGTTCCATCTGCCAAGCAATACATTTGTGGGGCCACATCTGTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS GCA 72 bp GAAGCTAAAAGCAGACTTGGGGGATATGCCTGCAGCTaGAGAAAGATGTATGGAAACAGACACGCAACTCTG +
Preference number: 6 (lower is better)
Translates to: EAKSRLGGYACS*RKMYGNRHATL
Trigger: CAGAGTTGCGTGTCTGTTTCCATACATCTTTCTGCAGCTGCAGGCATATCCCCCAAGTCTGCTTTTAGCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS GCA 72 bp GATAGGGAAGCTAAAAGCAGACTTGGGGGATATGCCTaGAGCTGCAGAAAGATGTATGGAAACAGACACGCA +
Preference number: 6 (lower is better)
Translates to: DREAKSRLGGYA*SCRKMYGNRHA
Trigger: TGCGTGTCTGTTTCCATACATCTTTCTGCAGCTGCAGGCATATCCCCCAAGTCTGCTTTTAGCTTCCCTATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS GCA 72 bp GCTACTGCAAGAAGAACTACTGGAAGAAGGCACCCCTaGCAAGACGCTCAAACTCTTGCCTCTTTAGACAAA +
Preference number: 6 (lower is better)
Translates to: ATARRTTGRRHP*QDAQTLASLDK
Trigger: TTTGTCTAAAGAGGCAAGAGTTTGAGCGTCTTGGCAGGGGTGCCTTCTTCCAGTAGTTCTTCTTGCAGTAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS CCA 72 bp GCAAGAATGAAGAAGAGCTACTGCAAGAAGAACTACTaGAAGAAGGCACCCCTGCCAAGACGCTCAAACTCT +
Preference number: 6 (lower is better)
Translates to: ARMKKSYCKKNY*KKAPLPRRSNS
Trigger: AGAGTTTGAGCGTCTTGGCAGGGGTGCCTTCTTCCAGTAGTTCTTCTTGCAGTAGCTCTTCTTCATTCTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS CAA 90 bp GCTGAGTATCCTCCTCTAAGAACAAGGGCTGGGACTCATTTGTCTTaGAATGGACACAGTGGTAGCTGGGCACTCAAGGGAATATCTACT +
Preference number: 6 (lower is better)
Translates to: AEYPPLRTRAGTHLS*NGHSGSWALKGIST
Trigger: AGTAGATATTCCCTTGAGTGCCCAGCTACCACTGTGTCCATTCAAAGACAAATGAGTCCCAGCCCTTGTTCTTAGAGGAGGATACTCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS CAA 90 bp ACAGCCAGAGCTTTAGCAAGTCCATTTCTAATTTGCCTCTGTGCCTaGTCTGGACAGATGTGGCCCCACAAATGTATTGCTTGGCAGATG +
Preference number: 6 (lower is better)
Translates to: TARALASPFLICLCA*SGQMWPHKCIAWQM
Trigger: CATCTGCCAAGCAATACATTTGTGGGGCCACATCTGTCCAGACAAGGCACAGAGGCAAATTAGAAATGGACTTGCTAAAGCTCTGGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS GCA 72 bp TCTTACACACCCCAGTCTACCTATCTTACCCACTATTaGTCACCAGGGAAAAAGAACTCAGTGATGACGCCA +
Preference number: 6 (lower is better)
Translates to: SYTPQSTYLTHY*SPGKKNSVMTP
Trigger: TGGCGTCATCACTGAGTTCTTTTTCCCTGGTGAGCAATAGTGGGTAAGATAGGTAGACTGGGGTGTGTAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS CCA 72 bp AACTTCACCCTCATACAATGGGCCCCAGTAAAACTGTaGGCCTTAATAAGCACATTCCTTTCCCTTCAGGTG +
Preference number: 6 (lower is better)
Translates to: NFTLIQWAPVKL*ALISTFLSLQV
Trigger: CACCTGAAGGGAAAGGAATGTGCTTATTAAGGCCCACAGTTTTACTGGGGCCCATTGTATGAGGGTGAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS CAA 72 bp TTCTTACACACCCCAGTCTACCTATCTTACCCACTATaGCTCACCAGGGAAAAAGAACTCAGTGATGACGCC +
Preference number: 6 (lower is better)
Translates to: FLHTPVYLSYPL*LTREKELSDDA
Trigger: GGCGTCATCACTGAGTTCTTTTTCCCTGGTGAGCAATAGTGGGTAAGATAGGTAGACTGGGGTGTGTAAGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS CAA 72 bp TTCAGGTGCACTAAGATAGGGAAGCTAAAAGCAGACTaGGGGGATATGCCTGCAGCTGCAGAAAGATGTATG +
Preference number: 6 (lower is better)
Translates to: FRCTKIGKLKAD*GDMPAAAERCM
Trigger: CATACATCTTTCTGCAGCTGCAGGCATATCCCCCAAGTCTGCTTTTAGCTTCCCTATCTTAGTGCACCTGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS TCA 72 bp AGGCACAAAGAGTATCAGAGGGAAAGCAGCCCAACTTaGGGTGACCTTAAAAATGTGCTGGACATAAAGGAG +
Preference number: 6 (lower is better)
Translates to: RHKEYQRESSPT*GDLKNVLDIKE
Trigger: CTCCTTTATGTCCAGCACATTTTTAAGGTCACCTCAAGTTGGGCTGCTTTCCCTCTGATACTCTTTGTGCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS GCA 72 bp CAGAGCTTTAGCAAGTCCATTTCTAATTTGCCTCTGTaGCTTGTCTGGACAGATGTGGCCCCACAAATGTAT +
Preference number: 6 (lower is better)
Translates to: QSFSKSISNLPL*LVWTDVAPQMY
Trigger: ATACATTTGTGGGGCCACATCTGTCCAGACAAGGCACAGAGGCAAATTAGAAATGGACTTGCTAAAGCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS GCA 72 bp ACAAGGAAGCCCCAAACATGCATGAGATTAAGTTCCTaGCAACCTGGTAGATGGGAACAGAGCAAGATTTGT +
Preference number: 6 (lower is better)
Translates to: TRKPQTCMRLSS*QPGRWEQSKIC
Trigger: ACAAATCTTGCTCTGTTCCCATCTACCAGGTTGGCAGGAACTTAATCTCATGCATGTTTGGGGCTTCCTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS GCA 72 bp GCTGCAGAAAGATGTATGGAAACAGACACGCAACTCTaGCTCCCAGATAAACACAACAAAGAGACAGAGAAG +
Preference number: 6 (lower is better)
Translates to: AAERCMETDTQL*LPDKHNKETEK
Trigger: CTTCTCTGTCTCTTTGTTGTGTTTATCTGGGAGGCAGAGTTGCGTGTCTGTTTCCATACATCTTTCTGCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS CCA 72 bp GACAGATGTGGCCCCACAAATGTATTGCTTGGCAGATaGAACTTGAGCCATGTACAACCTTTACAACTGTTG +
Preference number: 6 (lower is better)
Translates to: DRCGPTNVLLGR*NLSHVQPLQLL
Trigger: CAACAGTTGTAAAGGTTGTACATGGCTCAAGTTCCATCTGCCAAGCAATACATTTGTGGGGCCACATCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS CCA 72 bp TTTCTAATTTGCCTCTGTGCCTTGTCTGGACAGATGTaGCCCCACAAATGTATTGCTTGGCAGATGGAACTT +
Preference number: 6 (lower is better)
Translates to: FLICLCALSGQM*PHKCIAWQMEL
Trigger: AAGTTCCATCTGCCAAGCAATACATTTGTGGGGCCACATCTGTCCAGACAAGGCACAGAGGCAAATTAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS CAA 72 bp GCTTTAGCAAGTCCATTTCTAATTTGCCTCTGTGCCTaGTCTGGACAGATGTGGCCCCACAAATGTATTGCT +
Preference number: 6 (lower is better)
Translates to: ALASPFLICLCA*SGQMWPHKCIA
Trigger: AGCAATACATTTGTGGGGCCACATCTGTCCAGACAAGGCACAGAGGCAAATTAGAAATGGACTTGCTAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS CCA 72 bp AGCAAAGGTCTGCTGCTTGGCTTTGTGTTTACTTACTaGGAAATAACAGGACCCAAAATATCTCTGCTGCGA +
Preference number: 6 (lower is better)
Translates to: SKGLLLGFVFTY*EITGPKISLLR
Trigger: TCGCAGCAGAGATATTTTGGGTCCTGTTATTTCCCAGTAAGTAAACACAAAGCCAAGCAGCAGACCTTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS CCA 72 bp TTATCAATAAGCTATGGATTAATAGTGAGGAGGCCTTaGACCCACACACACATAAATGTCTCTGGAAAGGCT +
Preference number: 6 (lower is better)
Translates to: LSISYGLIVRRP*THTHINVSGKA
Trigger: AGCCTTTCCAGAGACATTTATGTGTGTGTGGGTCCAAGGCCTCCTCACTATTAATCCATAGCTTATTGATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS CAA 72 bp TTTATCAATAAGCTATGGATTAATAGTGAGGAGGCCTaGGACCCACACACACATAAATGTCTCTGGAAAGGC +
Preference number: 6 (lower is better)
Translates to: FINKLWINSEEA*DPHTHKCLWKG
Trigger: GCCTTTCCAGAGACATTTATGTGTGTGTGGGTCCAAGGCCTCCTCACTATTAATCCATAGCTTATTGATAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS GCA 72 bp ACCTCTGCGGACATAAAGGATAAACTGAGATCATTCTaGAAGAATGAAGAAGAGCTACTGCAAGAAGAACTA +
Preference number: 6 (lower is better)
Translates to: TSADIKDKLRSF*KNEEELLQEEL
Trigger: TAGTTCTTCTTGCAGTAGCTCTTCTTCATTCTTGCAGAATGATCTCAGTTTATCCTTTATGTCCGCAGAGGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS CAA 90 bp AACAAGAATTTTATCAATAAGCTATGGATTAATAGTGAGGAGGCCTaGGACCCACACACACATAAATGTCTCTGGAAAGGCTTGCCATTT +
Preference number: 6 (lower is better)
Translates to: NKNFINKLWINSEEA*DPHTHKCLWKGLPF
Trigger: AAATGGCAAGCCTTTCCAGAGACATTTATGTGTGTGTGGGTCCAAGGCCTCCTCACTATTAATCCATAGCTTATTGATAAAATTCTTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS CCA 72 bp ATTCTGGTTCTGAACAAGAATTTTATCAATAAGCTATaGATTAATAGTGAGGAGGCCTTGGACCCACACACA +
Preference number: 6 (lower is better)
Translates to: ILVLNKNFINKL*INSEEALDPHT
Trigger: TGTGTGTGGGTCCAAGGCCTCCTCACTATTAATCCATAGCTTATTGATAAAATTCTTGTTCAGAACCAGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000503498.1
CDS CAA 72 bp AATGACTCACAGCCAGCTACACAGATAATGATAAGCTaGGTAATTTATAACAAAAAGGCACAAAGAGTATCA +
Preference number: 6 (lower is better)
Translates to: NDSQPATQIMIS*VIYNKKAQRVS
Trigger: TGATACTCTTTGTGCCTTTTTGTTATAAATTACCAAGCTTATCATTATCTGTGTAGCTGGCTGTGAGTCATT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000503498.1