RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EFCAB11 (Homo sapiens)

Ensembl gene IDs: ENSG00000140025

Ensembl transcript IDs: ENST00000316738.12, ENST00000538485.6, ENST00000550103.2, ENST00000553871.5, ENST00000554761.5, ENST00000555430.1, ENST00000555608.5, ENST00000555872.5, ENST00000556005.1, ENST00000556078.1, ENST00000556609.5, ENST00000556639.5, ENST00000557685.5

Found 405 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGGAGCCCAGCAGGACAGGCAAGGCATGGGGAACGTGAACACACATaGCTAAGTGTCTGGGTGCAGGACGTGACTGCTAGAAACCAGGGG +
Preference number: 1 (lower is better)
Translates to: WSPAGQARHGEREHT*LSVWVQDVTARNQG
Trigger: CCCCTGGTTTCTAGCAGTCACGTCCTGCACCCAGACACTTAGCCATGTGTGTTCACGTTCCCCATGCCTTGCCTGTCCTGCTGGGCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
3UTR CCA 90 bp GGGGGCAAAGGCAGAATCCTGGAGCTGGGTAAGAGGCTGAGATGGTaGTGGAGGTTTGCACTGGGTGACACAGTGGAGGTGCTGAGAGGT +
Preference number: 1 (lower is better)
Translates to: GGKGRILELGKRLRW*WRFALGDTVEVLRG
Trigger: ACCTCTCAGCACCTCCACTGTGTCACCCAGTGCAAACCTCCACCACCATCTCAGCCTCTTACCCAGCTCCAGGATTCTGCCTTTGCCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556639.5
3UTR CCA 90 bp GATGGGGGCAAAGGCAGAATCCTGGAGCTGGGTAAGAGGCTGAGATaGTGGTGGAGGTTTGCACTGGGTGACACAGTGGAGGTGCTGAGA +
Preference number: 1 (lower is better)
Translates to: DGGKGRILELGKRLR*WWRFALGDTVEVLR
Trigger: TCTCAGCACCTCCACTGTGTCACCCAGTGCAAACCTCCACCACCATCTCAGCCTCTTACCCAGCTCCAGGATTCTGCCTTTGCCCCCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556639.5
3UTR TCA 90 bp AGATTGATGGGGGCAAAGGCAGAATCCTGGAGCTGGGTAAGAGGCTaGGATGGTGGTGGAGGTTTGCACTGGGTGACACAGTGGAGGTGC +
Preference number: 1 (lower is better)
Translates to: RLMGAKAESWSWVRG*DGGGGLHWVTQWRC
Trigger: GCACCTCCACTGTGTCACCCAGTGCAAACCTCCACCACCATCTCAGCCTCTTACCCAGCTCCAGGATTCTGCCTTTGCCCCCATCAATCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556639.5
3UTR CCA 90 bp GCCCAGAGTGGTTGTTTGAAGGGGATGTGGATTAAGCATGGATGTTaGGGGCGGTGTGTCCACACAGTGTGTAAGGCTCTTCACCATGGG +
Preference number: 1 (lower is better)
Translates to: AQSGCLKGMWIKHGC*GRCVHTVCKALHHG
Trigger: CCCATGGTGAAGAGCCTTACACACTGTGTGGACACACCGCCCCCAACATCCATGCTTAATCCACATCCCCTTCAAACAACCACTCTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556639.5
3UTR GCA 90 bp TGCCTCGATATTGCCACTTTACATCATCATGTGGCAATCTGCCTGTaGACTCAGGATCTTGGACGCTGGGTCAGGGCATGGACCTTATGC +
Preference number: 1 (lower is better)
Translates to: CLDIATLHHHVAICL*TQDLGRWVRAWTLC
Trigger: GCATAAGGTCCATGCCCTGACCCAGCGTCCAAGATCCTGAGTGCACAGGCAGATTGCCACATGATGATGTAAAGTGGCAATATCGAGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
3UTR GCA 90 bp TTCTCCACAGTGAGACTCCCAAGCCTAGACCATCCTAAAGGGTTCTaGAAACATGTCTCTTGCCCCCAGTACCCTCATCACCCTGTTCTT +
Preference number: 1 (lower is better)
Translates to: FSTVRLPSLDHPKGF*KHVSCPQYPHHPVL
Trigger: AAGAACAGGGTGATGAGGGTACTGGGGGCAAGAGACATGTTTGCAGAACCCTTTAGGATGGTCTAGGCTTGGGAGTCTCACTGTGGAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
3UTR GCA 90 bp CTGTGCACTCAGGATCTTGGACGCTGGGTCAGGGCATGGACCTTATaGACATTCACATTTCATCTCATGACTGGGAAGCAAAAGCAGCTT +
Preference number: 1 (lower is better)
Translates to: LCTQDLGRWVRAWTL*TFTFHLMTGKQKQL
Trigger: AAGCTGCTTTTGCTTCCCAGTCATGAGATGAAATGTGAATGTGCATAAGGTCCATGCCCTGACCCAGCGTCCAAGATCCTGAGTGCACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
3UTR CCA 90 bp CACTTTACATCATCATGTGGCAATCTGCCTGTGCACTCAGGATCTTaGACGCTGGGTCAGGGCATGGACCTTATGCACATTCACATTTCA +
Preference number: 1 (lower is better)
Translates to: HFTSSCGNLPVHSGS*TLGQGMDLMHIHIS
Trigger: TGAAATGTGAATGTGCATAAGGTCCATGCCCTGACCCAGCGTCCAAGATCCTGAGTGCACAGGCAGATTGCCACATGATGATGTAAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
3UTR CCA 90 bp GTGGAGGTGCTGAGAGGTGGTCAGAGTCGAGATTTGTTGACAGCTTaGATGTGGAGGGTAAGAAAAAGAAAGGAACTTGGGATGACTTCC +
Preference number: 1 (lower is better)
Translates to: VEVLRGGQSRDLLTA*MWRVRKRKELGMTS
Trigger: GGAAGTCATCCCAAGTTCCTTTCTTTTTCTTACCCTCCACATCCAAGCTGTCAACAAATCTCGACTCTGACCACCTCTCAGCACCTCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556639.5
3UTR TCA 90 bp TACAAGGATCATTGCTGGACTTATTTATTGGGTGGAGAAGAGACCTaGAGTAGATTGATGGGGGCAAAGGCAGAATCCTGGAGCTGGGTA +
Preference number: 1 (lower is better)
Translates to: YKDHCWTYLLGGEET*SRLMGAKAESWSWV
Trigger: TACCCAGCTCCAGGATTCTGCCTTTGCCCCCATCAATCTACTTCAGGTCTCTTCTCCACCCAATAAATAAGTCCAGCAATGATCCTTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556639.5
3UTR CCA 90 bp GAAGCAAAAGCAGCTTCCCAGAGCTTTTTGCCAACTGACAGGTGGTaGGAATGTACAAATAGCAGTGCTTACAATGAGATGGAGAAGGTT +
Preference number: 1 (lower is better)
Translates to: EAKAASQSFLPTDRW*ECTNSSAYNEMEKV
Trigger: AACCTTCTCCATCTCATTGTAAGCACTGCTATTTGTACATTCCCACCACCTGTCAGTTGGCAAAAAGCTCTGGGAAGCTGCTTTTGCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
3UTR GCA 90 bp CAGGATATAACTTTAAACGTCTCCAGTCATGATGGGAGCATTTGGTaGCTCGATATTGCCACTTTACATCATCATGTGGCAATCTGCCTG +
Preference number: 1 (lower is better)
Translates to: QDITLNVSSHDGSIW*LDIATLHHHVAICL
Trigger: CAGGCAGATTGCCACATGATGATGTAAAGTGGCAATATCGAGGCACCAAATGCTCCCATCATGACTGGAGACGTTTAAAGTTATATCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
3UTR TCA 90 bp CTTACACCAAAAATATCAGGATATAACTTTAAACGTCTCCAGTCATaGTGGGAGCATTTGGTGCCTCGATATTGCCACTTTACATCATCA +
Preference number: 1 (lower is better)
Translates to: LTPKISGYNFKRLQS*WEHLVPRYCHFTSS
Trigger: TGATGATGTAAAGTGGCAATATCGAGGCACCAAATGCTCCCATCATGACTGGAGACGTTTAAAGTTATATCCTGATATTTTTGGTGTAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
3UTR TCA 90 bp ATAAAGTACCTTCTACCACCAGACTTGCTTTCAGTTACTTTATTTTaGACAGTACTAGTTGAGCCTGAAACAACCTCAATCAATGCCAGG +
Preference number: 1 (lower is better)
Translates to: IKYLLPPDLLSVTLF*TVLVEPETTSINAR
Trigger: CCTGGCATTGATTGAGGTTGTTTCAGGCTCAACTAGTACTGTTCAAAATAAAGTAACTGAAAGCAAGTCTGGTGGTAGAAGGTACTTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556639.5
3UTR-3UTR CCA 90 bp CCCTGTTCTTCCTCTGTATATAGCCCGAGAGGGCTTGCTCATGTTAGCCCAAGCGTGAGTAGAGCACCGTaGCCTGCAGTGTGGAGAGGG +
Preference number: 2 (lower is better)
Translates to: PCSSSVYSPRGLAHVSPSVSRAP*PAVWRG
Trigger: CCCTCTCCACACTGCAGGCCACGGTGCTCTACTCAC...GCTTGGGCTAACATGAGCAAGCCCTCTCGGGCTATATACAGAGGAAGAACAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
3UTR-3UTR GCA 90 bp TGCCTGTGCACTCAGGATCTTGGACGCTGGGTCAGGGCATGGACCTTATGCACACTTCCCAGAGCTTTTTaGCAACTGACAGGTGGTGGG +
Preference number: 2 (lower is better)
Translates to: CLCTQDLGRWVRAWTLCTLPRAF*QLTGGG
Trigger: CCCACCACCTGTCAGTTGGCAAAAAGCTCTGGGAAG...TGTGCATAAGGTCCATGCCCTGACCCAGCGTCCAAGATCCTGAGTGCACAGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
3UTR-3UTR TCA 90 bp GCTTCCCAAGGCCTGGCTGATTGCTTGGAACATAGTAAGTATTCTGTATGTGTACTAGCAATGGCGGCCTaGCTCAGGGCTGCTGGCCAC +
Preference number: 2 (lower is better)
Translates to: ASQGLADCLEHSKYSVCVLAMAA*LRAAGH
Trigger: GTGGCCAGCAGCCCTGAGTCAGGCCGCCATTGCTAG...TACACATACAGAATACTTACTATGTTCCAAGCAATCAGCCAGGCCTTGGGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
3UTR-3UTR TCA 90 bp GCCCGAGAGGGCTTGCTCATGTTAGCCCAAGCCGATTTCTTTGTCTTGCACAGAGTGAGGACAATGAAGTaGGTGAGTAGAGCACCGTGG +
Preference number: 2 (lower is better)
Translates to: AREGLLMLAQADFFVLHRVRTMK*VSRAPW
Trigger: CCACGGTGCTCTACTCACTCACTTCATTGTCCTCAC...TCTGTGCAAGACAAAGAAATCGGCTTGGGCTAACATGAGCAAGCCCTCTCGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
3UTR-3UTR TCA 90 bp CAGACGTCAGTACTCCCCTGTGCCATAGATGTTCCACATGAACCTCCAGGAAATGGTGAGGGGTGTGCCTaGATGATGGAGTCAGCTGCT +
Preference number: 2 (lower is better)
Translates to: QTSVLPCAIDVPHEPPGNGEGCA*MMESAA
Trigger: AGCAGCTGACTCCATCATTCAGGCACACCCCTCACC...ATTTCCTGGAGGTTCATGTGGAACATCTATGGCACAGGGGAGTACTGACGTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556639.5
3UTR-3UTR GCA 90 bp GCCCGAGAGGGCTTGCTCATGTTAGCCCAAGCCGATTTCTTTGTCTTGCACAGAGCTGGAGTGCGACAGTaGAATCATGGCTCACTGAAG +
Preference number: 2 (lower is better)
Translates to: AREGLLMLAQADFFVLHRAGVRQ*NHGSLK
Trigger: CTTCAGTGAGCCATGATTGCACTGTCGCACTCCAGC...TCTGTGCAAGACAAAGAAATCGGCTTGGGCTAACATGAGCAAGCCCTCTCGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
3UTR-3UTR GCA 90 bp CTCAAGGCTTGCTTCTCCACAGTGAGACTCCCAAGCCTAGACCATCCTAAAGGGTCATCCAGGCTGGAGTaGGACAGTGCAATCATGGCT +
Preference number: 2 (lower is better)
Translates to: LKACFSTVRLPSLDHPKGSSRLE*DSAIMA
Trigger: AGCCATGATTGCACTGTCGCACTCCAGCCTGGATGA...CCCTTTAGGATGGTCTAGGCTTGGGAGTCTCACTGTGGAGAAGCAAGCCTTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
3UTR-3UTR CCA 90 bp CCCTGTTCTTCCTCTGTATATAGCCCGAGAGGGCTTGCTCATGTTAGCCCAAGCGGAAACTGGCACCATTaGCAGGAAAAGTCTGCCCCT +
Preference number: 2 (lower is better)
Translates to: PCSSSVYSPRGLAHVSPSGNWHH*QEKSAP
Trigger: AGGGGCAGACTTTTCCTGCCAATGGTGCCAGTTTCC...GCTTGGGCTAACATGAGCAAGCCCTCTCGGGCTATATACAGAGGAAGAACAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
3UTR-3UTR TCA 90 bp TTAGCCCAAGCCGATTTCTTTGTCTTGCACAGACAGTGCCCTGGGACCACTTTAGCAATCATGGCTCACTaGAGCTTCAAACCCCTGGGC +
Preference number: 2 (lower is better)
Translates to: LAQADFFVLHRQCPGTTLAIMAH*SFKPLG
Trigger: GCCCAGGGGTTTGAAGCTTCAGTGAGCCATGATTGC...TAAAGTGGTCCCAGGGCACTGTCTGTGCAAGACAAAGAAATCGGCTTGGGCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
3UTR-3UTR GCA 90 bp CATTGGCAGGAAAAGTCTGCCCCTCTGCAGATATTAGGAGATGATGAGATTCAGGGCCTGACTCAGGGCTaGTGGCCACACAGAAGGAGA +
Preference number: 2 (lower is better)
Translates to: HWQEKSAPLQILGDDEIQGLTQG*WPHRRR
Trigger: TCTCCTTCTGTGTGGCCAGCAGCCCTGAGTCAGGCC...CTGAATCTCATCATCTCCTAATATCTGCAGAGGGGCAGACTTTTCCTGCCAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
3UTR-3UTR GCA 90 bp CTCAAGGCTTGCTTCTCCACAGTGAGACTCCCAAGCCTAGACCATCCTAAAGGGTGCAAACATGTCTCTTaGCCCCAGTACCCTCATCAC +
Preference number: 2 (lower is better)
Translates to: LKACFSTVRLPSLDHPKGCKHVS*PQYPHH
Trigger: GTGATGAGGGTACTGGGGGCAAGAGACATGTTTGCA...CCCTTTAGGATGGTCTAGGCTTGGGAGTCTCACTGTGGAGAAGCAAGCCTTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
3UTR-3UTR TCA 90 bp CAGACGTCAGTACTCCCCTGTGCCATAGATGTTCCACATGAACCTCCAGGAAATAGGGGTGTGCCTGAATaGTGGAGTCAGCTGCTAAGA +
Preference number: 2 (lower is better)
Translates to: QTSVLPCAIDVPHEPPGNRGVPE*WSQLLR
Trigger: TCTTAGCAGCTGACTCCATCATTCAGGCACACCCCT...ATTTCCTGGAGGTTCATGTGGAACATCTATGGCACAGGGGAGTACTGACGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556639.5
3UTR-3UTR CCA 90 bp CTCAAGGCTTGCTTCTCCACAGTGAGACTCCCAAGCCTAGACCATCCTAAAGGGATGCTTCCCAAGGCCTaGCTGATTGCTTGGAACATA +
Preference number: 2 (lower is better)
Translates to: LKACFSTVRLPSLDHPKGMLPKA*LIAWNI
Trigger: TATGTTCCAAGCAATCAGCCAGGCCTTGGGAAGCAT...CCCTTTAGGATGGTCTAGGCTTGGGAGTCTCACTGTGGAGAAGCAAGCCTTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
3UTR-3UTR CCA 90 bp GAGATGGACCAGGAAAATGATACTCCACAAGTTGGCTGCTGGCAGAAAGGAATTGTGCACTCAGGATCTTaGACGCTGGGTCAGGGCATG +
Preference number: 2 (lower is better)
Translates to: EMDQENDTPQVGCWQKGIVHSGS*TLGQGM
Trigger: CATGCCCTGACCCAGCGTCCAAGATCCTGAGTGCAC...AATTCCTTTCTGCCAGCAGCCAACTTGTGGAGTATCATTTTCCTGGTCCATCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
3UTR CAA 90 bp TACCCTCATCACCCTGTTCTTCCTCTGTATATAGCCCGAGAGGGCTaGCTCATGTTAGCCCAAGCCGATTTCTTTGTCTTGCACAGACAG +
Preference number: 2 (lower is better)
Translates to: YPHHPVLPLYIAREG*LMLAQADFFVLHRQ
Trigger: CTGTCTGTGCAAGACAAAGAAATCGGCTTGGGCTAACATGAGCAAGCCCTCTCGGGCTATATACAGAGGAAGAACAGGGTGATGAGGGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
3UTR CAA 90 bp CCACTTTACATCATCATGTGGCAATCTGCCTGTGCACTCAGGATCTaGGACGCTGGGTCAGGGCATGGACCTTATGCACATTCACATTTC +
Preference number: 2 (lower is better)
Translates to: PLYIIMWQSACALRI*DAGSGHGPYAHSHF
Trigger: GAAATGTGAATGTGCATAAGGTCCATGCCCTGACCCAGCGTCCAAGATCCTGAGTGCACAGGCAGATTGCCACATGATGATGTAAAGTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
3UTR-3UTR TCA 90 bp CCCTGTTCTTCCTCTGTATATAGCCCGAGAGGGCTTGCTCATGTTAGCCCAAGCCCAATGTTGAGCAAATaGAGGAAACTGGCACCATTG +
Preference number: 2 (lower is better)
Translates to: PCSSSVYSPRGLAHVSPSPMLSK*RKLAPL
Trigger: CAATGGTGCCAGTTTCCTTCATTTGCTCAACATTGG...GCTTGGGCTAACATGAGCAAGCCCTCTCGGGCTATATACAGAGGAAGAACAGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
3UTR-3UTR GCA 90 bp ATTCTTTCTTCTCTGGACCGACAAGAGTTTTCCCTTTGCAGGCCTCTTCCTGAGGTACATCTGAGAATCTaGACAGGTGAGGGGTGTGCC +
Preference number: 2 (lower is better)
Translates to: ILSSLDRQEFSLCRPLPEVHLRI*TGEGCA
Trigger: GGCACACCCCTCACCTGTGCAGATTCTCAGATGTAC...CTCAGGAAGAGGCCTGCAAAGGGAAAACTCTTGTCGGTCCAGAGAAGAAAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556639.5
3UTR-3UTR CCA 90 bp TATAGCCCGAGAGGGCTTGCTCATGTTAGCCCAAGCCGATTTCTTTGTCTTGCACTCTATCATCCAGGCTaGAGTGCGACAGTGCAATCA +
Preference number: 2 (lower is better)
Translates to: YSPRGLAHVSPSRFLCLALYHPG*SATVQS
Trigger: TGATTGCACTGTCGCACTCCAGCCTGGATGATAGAG...TGCAAGACAAAGAAATCGGCTTGGGCTAACATGAGCAAGCCCTCTCGGGCTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
3UTR CAA 90 bp TTGGAATTACCTTCACTAAATGCTGAGTGTCCAGCATTGCTGTTCTaGCTCCAGTATAGCAGTTACTGGAGCCCAGCAGGACAGGCAAGG +
Preference number: 2 (lower is better)
Translates to: LELPSLNAECPALLF*LQYSSYWSPAGQAR
Trigger: CCTTGCCTGTCCTGCTGGGCTCCAGTAACTGCTATACTGGAGCAAGAACAGCAATGCTGGACACTCAGCATTTAGTGAAGGTAATTCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
3UTR-3UTR TCA 90 bp GCAAAAGCAGCTTCCCAGAGCTTTTTGCCAACTGACAGGTGGTGGGAATGTACAAATACCACAGGGTGTTaGTGGCAGGCAAAGTCAAGA +
Preference number: 2 (lower is better)
Translates to: AKAASQSFLPTDRWWECTNTTGC*WQAKSR
Trigger: TCTTGACTTTGCCTGCCATCAACACCCTGTGGTATT...TGTACATTCCCACCACCTGTCAGTTGGCAAAAAGCTCTGGGAAGCTGCTTTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
3UTR-3UTR TCA 90 bp AGGTTTGCACTGGGTGACACAGTGGAGGTGCTGAGAGGTGGTCAGAGTCGAGATTTATTAATGTACATCTaGGAATCTGCACAGGTGAGG +
Preference number: 2 (lower is better)
Translates to: RFALGDTVEVLRGGQSRDLLMYI*ESAQVR
Trigger: CCTCACCTGTGCAGATTCTCAGATGTACATTAATAA...ATCTCGACTCTGACCACCTCTCAGCACCTCCACTGTGTCACCCAGTGCAAACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556639.5
3UTR-3UTR GCA 90 bp CCTCAAGAAGTCTACTTCTTCGGTCATGCCATTCACACAGAAGGTATAGCTGATGTGGCAATCTGCCTGTaGACTCAGGATCTTGGACGC +
Preference number: 2 (lower is better)
Translates to: PQEVYFFGHAIHTEGIADVAICL*TQDLGR
Trigger: GCGTCCAAGATCCTGAGTGCACAGGCAGATTGCCAC...ATCAGCTATACCTTCTGTGTGAATGGCATGACCGAAGAAGTAGACTTCTTGAGG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
3UTR-3UTR CCA 90 bp CTCAAGGCTTGCTTCTCCACAGTGAGACTCCCAAGCCTAGACCATCCTAAAGGGGCCTGGCTGATTGCTTaGAACATAGTAAGTATTCTG +
Preference number: 2 (lower is better)
Translates to: LKACFSTVRLPSLDHPKGAWLIA*NIVSIL
Trigger: CAGAATACTTACTATGTTCCAAGCAATCAGCCAGGC...CCCTTTAGGATGGTCTAGGCTTGGGAGTCTCACTGTGGAGAAGCAAGCCTTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
3UTR-3UTR CCA 90 bp CCTCTGTATATAGCCCGAGAGGGCTTGCTCATGTTAGCCCAAGCCGATTTCTTTGCGACAGTGCAATCATaGCTCACTGAAGCTTCAAAC +
Preference number: 2 (lower is better)
Translates to: PLYIAREGLLMLAQADFFATVQS*LTEASN
Trigger: GTTTGAAGCTTCAGTGAGCCATGATTGCACTGTCGC...AAAGAAATCGGCTTGGGCTAACATGAGCAAGCCCTCTCGGGCTATATACAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
3UTR-3UTR CCA 90 bp AATGCTGAGTGTCCAGCATTGCTGTTCTTGCTCCAGTATAGCAGTTACTGGAGCGAACGTGAACACACATaGCTAAGTGTCTGGGTGCAG +
Preference number: 2 (lower is better)
Translates to: NAECPALLFLLQYSSYWSEREHT*LSVWVQ
Trigger: CTGCACCCAGACACTTAGCCATGTGTGTTCACGTTC...GCTCCAGTAACTGCTATACTGGAGCAAGAACAGCAATGCTGGACACTCAGCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
3UTR-3UTR CCA 90 bp TCGATATTGCCACTTTACATCATCATGTGGCAATCTGCCTGTGCACTCAGGATCCGCTGGGTCAGGGCATaGACCTTATGCACATTCACA +
Preference number: 2 (lower is better)
Translates to: SILPLYIIMWQSACALRIRWVRA*TLCTFT
Trigger: TGTGAATGTGCATAAGGTCCATGCCCTGACCCAGCG...GATCCTGAGTGCACAGGCAGATTGCCACATGATGATGTAAAGTGGCAATATCGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
3UTR CAA 90 bp AGTGGAGGTGCTGAGAGGTGGTCAGAGTCGAGATTTGTTGACAGCTaGGATGTGGAGGGTAAGAAAAAGAAAGGAACTTGGGATGACTTC +
Preference number: 2 (lower is better)
Translates to: SGGAERWSESRFVDS*DVEGKKKKGTWDDF
Trigger: GAAGTCATCCCAAGTTCCTTTCTTTTTCTTACCCTCCACATCCAAGCTGTCAACAAATCTCGACTCTGACCACCTCTCAGCACCTCCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556639.5
3UTR-3UTR CCA 90 bp CATGAAATAAAAGTTGGGACCTCAAGAAGTCTACTTCTTCGGTCATGCCATTCAGTGCACTCAGGATCTTaGACGCTGGGTCAGGGCATG +
Preference number: 2 (lower is better)
Translates to: HEIKVGTSRSLLLRSCHSVHSGS*TLGQGM
Trigger: CATGCCCTGACCCAGCGTCCAAGATCCTGAGTGCAC...TGAATGGCATGACCGAAGAAGTAGACTTCTTGAGGTCCCAACTTTTATTTCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
3UTR-3UTR CCA 90 bp AGGTTTGCACTGGGTGACACAGTGGAGGTGCTGAGAGGTGGTCAGAGTCGAGATAAAAAGAAAGGAACTTaGGATGACTTCCAGGTTTGT +
Preference number: 2 (lower is better)
Translates to: RFALGDTVEVLRGGQSRDKKKGT*DDFQVC
Trigger: ACAAACCTGGAAGTCATCCCAAGTTCCTTTCTTTTT...ATCTCGACTCTGACCACCTCTCAGCACCTCCACTGTGTCACCCAGTGCAAACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556639.5
3UTR-3UTR TCA 90 bp AATGCTGAGTGTCCAGCATTGCTGTTCTTGCTCCAGTATAGCAGTTACTGGAGCCCAATGTTGAGCAAATaGAGGAAACTGGCACCATTG +
Preference number: 2 (lower is better)
Translates to: NAECPALLFLLQYSSYWSPMLSK*RKLAPL
Trigger: CAATGGTGCCAGTTTCCTTCATTTGCTCAACATTGG...GCTCCAGTAACTGCTATACTGGAGCAAGAACAGCAATGCTGGACACTCAGCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
3UTR-3UTR TCA 90 bp GAGATGGACCAGGAAAATGATACTCCACAAGTTGGCTGCTGGCAGAAAGGAATTAATACCACAGGGTGTTaGTGGCAGGCAAAGTCAAGA +
Preference number: 2 (lower is better)
Translates to: EMDQENDTPQVGCWQKGINTTGC*WQAKSR
Trigger: TCTTGACTTTGCCTGCCATCAACACCCTGTGGTATT...AATTCCTTTCTGCCAGCAGCCAACTTGTGGAGTATCATTTTCCTGGTCCATCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
3UTR-3UTR TCA 90 bp ATTCTTTCTTCTCTGGACCGACAAGAGTTTTCCCTTTGCAGGCCTCTTCCTGAGAGGTGTCAAAGGCTGTaGAGATGTGTCTTACTTCGT +
Preference number: 2 (lower is better)
Translates to: ILSSLDRQEFSLCRPLPERCQRL*RCVLLR
Trigger: ACGAAGTAAGACACATCTTCACAGCCTTTGACACCT...CTCAGGAAGAGGCCTGCAAAGGGAAAACTCTTGTCGGTCCAGAGAAGAAAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556639.5
3UTR-3UTR TCA 90 bp ATTCTTTCTTCTCTGGACCGACAAGAGTTTTCCCTTTGCAGGCCTCTTCCTGAGAAATCCTTAGGCCTCTaGATACCTCAAGAACAGTCC +
Preference number: 2 (lower is better)
Translates to: ILSSLDRQEFSLCRPLPEKSLGL*IPQEQS
Trigger: GGACTGTTCTTGAGGTATTCAGAGGCCTAAGGATTT...CTCAGGAAGAGGCCTGCAAAGGGAAAACTCTTGTCGGTCCAGAGAAGAAAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556639.5
3UTR-3UTR TCA 90 bp AGAGAGTTTAAGAAGCACTGCCTTATAGGATGTAATATAAAACGAGCCTTTCCTTTGCAGGCCTCTTCCTaGGGGTCTGCCCAGAGTGGT +
Preference number: 2 (lower is better)
Translates to: REFKKHCLIGCNIKRAFPLQASS*GSAQSG
Trigger: ACCACTCTGGGCAGACCCTCAGGAAGAGGCCTGCAA...AGGAAAGGCTCGTTTTATATTACATCCTATAAGGCAGTGCTTCTTAAACTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556639.5
3UTR-3UTR GCA 90 bp AAAGGGTTCTGCAAACATGTCTCTTGCCCCCAGTACCCTCATCACCCTGTTCTTCTTATTGCATGCCTGTaGCAAAATATCTCCCGTAAC +
Preference number: 2 (lower is better)
Translates to: KGFCKHVSCPQYPHHPVLLIACL*QNISRN
Trigger: GTTACGGGAGATATTTTGGCACAGGCATGCAATAAG...AAGAACAGGGTGATGAGGGTACTGGGGGCAAGAGACATGTTTGCAGAACCCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
3UTR-3UTR GCA 90 bp TATAGCCCGAGAGGGCTTGCTCATGTTAGCCCAAGCCGATTTCTTTGTCTTGCACTTATTGCATGCCTGTaGCAAAATATCTCCCGTAAC +
Preference number: 2 (lower is better)
Translates to: YSPRGLAHVSPSRFLCLALIACL*QNISRN
Trigger: GTTACGGGAGATATTTTGGCACAGGCATGCAATAAG...TGCAAGACAAAGAAATCGGCTTGGGCTAACATGAGCAAGCCCTCTCGGGCTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
3UTR-3UTR CCA 90 bp TATAGCCCGAGAGGGCTTGCTCATGTTAGCCCAAGCCGATTTCTTTGTCTTGCAGCCTGGCTGATTGCTTaGAACATAGTAAGTATTCTG +
Preference number: 2 (lower is better)
Translates to: YSPRGLAHVSPSRFLCLAAWLIA*NIVSIL
Trigger: CAGAATACTTACTATGTTCCAAGCAATCAGCCAGGC...TGCAAGACAAAGAAATCGGCTTGGGCTAACATGAGCAAGCCCTCTCGGGCTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
3UTR CAA 90 bp ACCAGTATTTTGGAATTACCTTCACTAAATGCTGAGTGTCCAGCATaGCTGTTCTTGCTCCAGTATAGCAGTTACTGGAGCCCAGCAGGA +
Preference number: 2 (lower is better)
Translates to: TSILELPSLNAECPA*LFLLQYSSYWSPAG
Trigger: TCCTGCTGGGCTCCAGTAACTGCTATACTGGAGCAAGAACAGCAATGCTGGACACTCAGCATTTAGTGAAGGTAATTCCAAAATACTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
3UTR-3UTR TCA 90 bp AAAGGGTTCTGCAAACATGTCTCTTGCCCCCAGTACCCTCATCACCCTGTTCTTGACATTACAATCTATTaGTCTCCCCAGAGTTACCAA +
Preference number: 2 (lower is better)
Translates to: KGFCKHVSCPQYPHHPVLDITIY*SPQSYQ
Trigger: TTGGTAACTCTGGGGAGATCAATAGATTGTAATGTC...AAGAACAGGGTGATGAGGGTACTGGGGGCAAGAGACATGTTTGCAGAACCCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
3UTR-3UTR TCA 90 bp AGAGAGTTTAAGAAGCACTGCCTTATAGGATGTAATATAAAACGAGCCTTTCCTGAGGTTTGCACTGGGTaGCACAGTGGAGGTGCTGAG +
Preference number: 2 (lower is better)
Translates to: REFKKHCLIGCNIKRAFPEVCTG*HSGGAE
Trigger: CTCAGCACCTCCACTGTGTCACCCAGTGCAAACCTC...AGGAAAGGCTCGTTTTATATTACATCCTATAAGGCAGTGCTTCTTAAACTCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556639.5
3UTR-3UTR GCA 90 bp GAGATGGACCAGGAAAATGATACTCCACAAGTTGGCTGCTGGCAGAAAGGAATTGATGGGAGCATTTGGTaGCTCGATATTGCCACTTTA +
Preference number: 2 (lower is better)
Translates to: EMDQENDTPQVGCWQKGIDGSIW*LDIATL
Trigger: TAAAGTGGCAATATCGAGGCACCAAATGCTCCCATC...AATTCCTTTCTGCCAGCAGCCAACTTGTGGAGTATCATTTTCCTGGTCCATCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
3UTR-3UTR CCA 90 bp GCCCGAGAGGGCTTGCTCATGTTAGCCCAAGCCGATTTCTTTGTCTTGCACAGATTTACAGTGATGATTTaGACTCAGGGACATTATCTT +
Preference number: 2 (lower is better)
Translates to: AREGLLMLAQADFFVLHRFTVMI*TQGHYL
Trigger: AAGATAATGTCCCTGAGTCCAAATCATCACTGTAAA...TCTGTGCAAGACAAAGAAATCGGCTTGGGCTAACATGAGCAAGCCCTCTCGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
3UTR-3UTR TCA 90 bp CTAAATGCTGAGTGTCCAGCATTGCTGTTCTTGCTCCAGTATAGCAGTTACTGGCCATCTCTAGGATTCTaGGATGCAAGTCTATCATCA +
Preference number: 2 (lower is better)
Translates to: LNAECPALLFLLQYSSYWPSLGF*DASLSS
Trigger: TGATGATAGACTTGCATCTCAGAATCCTAGAGATGG...CCAGTAACTGCTATACTGGAGCAAGAACAGCAATGCTGGACACTCAGCATTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
3UTR-3UTR GCA 90 bp CCTCAAGAAGTCTACTTCTTCGGTCATGCCATTCACACAGAAGGTATAGCTGATACTCCACAAGTTGGCTaGTGGCAGAAAGGAATTATG +
Preference number: 2 (lower is better)
Translates to: PQEVYFFGHAIHTEGIADTPQVG*WQKGIM
Trigger: CATAATTCCTTTCTGCCAGCAGCCAACTTGTGGAGT...ATCAGCTATACCTTCTGTGTGAATGGCATGACCGAAGAAGTAGACTTCTTGAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
3UTR-3UTR CCA 90 bp TGTAAGACTCTTCCAATCAGCATAACAGAAGAGCCTATTTGTTTTACCCAAGCTCGCTGGGTCAGGGCATaGACCTTATGCACATTCACA +
Preference number: 2 (lower is better)
Translates to: CKTLPISITEEPICFTQARWVRA*TLCTFT
Trigger: TGTGAATGTGCATAAGGTCCATGCCCTGACCCAGCG...AGCTTGGGTAAAACAAATAGGCTCTTCTGTTATGCTGATTGGAAGAGTCTTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
3UTR-3UTR TCA 90 bp ACATCATTAGTAGAGTCGAGTCTGCTGACATTACAATCTATTGATCTCCCCAGAAATACCACAGGGTGTTaGTGGCAGGCAAAGTCAAGA +
Preference number: 2 (lower is better)
Translates to: TSLVESSLLTLQSIDLPRNTTGC*WQAKSR
Trigger: TCTTGACTTTGCCTGCCATCAACACCCTGTGGTATT...TCTGGGGAGATCAATAGATTGTAATGTCAGCAGACTCGACTCTACTAATGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000557685.5
3UTR-3UTR TCA 90 bp GATGACTTCCAGGTTTGTTGCAAACAACGTGAAATACACAAATCATCAGGTAATGAGAATCTGCACAGGTaGGGGGTGTGCCTGAATGAT +
Preference number: 2 (lower is better)
Translates to: DDFQVCCKQREIHKSSGNENLHR*GVCLND
Trigger: ATCATTCAGGCACACCCCTCACCTGTGCAGATTCTC...ATTACCTGATGATTTGTGTATTTCACGTTGTTTGCAACAAACCTGGAAGTCATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556639.5
3UTR-3UTR TCA 90 bp TCACAAGTCTGTAGCATGACATCATTAGTAGAGTCGAGTCTGCTGACATTACAAGCTGACGTGACCATCTaGATCTCGATCTACTTCCAA +
Preference number: 2 (lower is better)
Translates to: SQVCSMTSLVESSLLTLQADVTI*ISIYFQ
Trigger: TTGGAAGTAGATCGAGATTCAGATGGTCACGTCAGC...TTGTAATGTCAGCAGACTCGACTCTACTAATGATGTCATGCTACAGACTTGTGA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557685.5
3UTR-3UTR CCA 90 bp CCTCTGTATATAGCCCGAGAGGGCTTGCTCATGTTAGCCCAAGCCGATTTCTTTTTTACAGTGATGATTTaGACTCAGGGACATTATCTT +
Preference number: 2 (lower is better)
Translates to: PLYIAREGLLMLAQADFFFTVMI*TQGHYL
Trigger: AAGATAATGTCCCTGAGTCCAAATCATCACTGTAAA...AAAGAAATCGGCTTGGGCTAACATGAGCAAGCCCTCTCGGGCTATATACAGAGG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
3UTR-3UTR TCA 90 bp GAGATGGACCAGGAAAATGATACTCCACAAGTTGGCTGCTGGCAGAAAGGAATTTTCCCTTGTGTAATATaGAGAAAGGGATTCTTACAC +
Preference number: 2 (lower is better)
Translates to: EMDQENDTPQVGCWQKGIFPCVI*RKGFLH
Trigger: GTGTAAGAATCCCTTTCTTCATATTACACAAGGGAA...AATTCCTTTCTGCCAGCAGCCAACTTGTGGAGTATCATTTTCCTGGTCCATCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
3UTR-3UTR TCA 90 bp AGAGAGTTTAAGAAGCACTGCCTTATAGGATGTAATATAAAACGAGCCTTTCCTCATACCTATCATAGGTaGGATGAGAAGGCCCCTCCT +
Preference number: 2 (lower is better)
Translates to: REFKKHCLIGCNIKRAFPHTYHR*DEKAPP
Trigger: AGGAGGGGCCTTCTCATCTCACCTATGATAGGTATG...AGGAAAGGCTCGTTTTATATTACATCCTATAAGGCAGTGCTTCTTAAACTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556639.5
3UTR-3UTR GCA 90 bp CCTCAAGAAGTCTACTTCTTCGGTCATGCCATTCACACAGAAGGTATAGCTGATTTGGTGCCTCGATATTaGCACTTTACATCATCATGT +
Preference number: 2 (lower is better)
Translates to: PQEVYFFGHAIHTEGIADLVPRY*HFTSSC
Trigger: ACATGATGATGTAAAGTGGCAATATCGAGGCACCAA...ATCAGCTATACCTTCTGTGTGAATGGCATGACCGAAGAAGTAGACTTCTTGAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
3UTR-3UTR CCA 90 bp CATGAAATAAAAGTTGGGACCTCAAGAAGTCTACTTCTTCGGTCATGCCATTCAGTGCTTACAATGAGATaGAGAAGGTTCCTAGGCATG +
Preference number: 2 (lower is better)
Translates to: HEIKVGTSRSLLLRSCHSVLTMR*RRFLGM
Trigger: CATGCCTAGGAACCTTCTCCATCTCATTGTAAGCAC...TGAATGGCATGACCGAAGAAGTAGACTTCTTGAGGTCCCAACTTTTATTTCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
3UTR-3UTR TCA 90 bp GTAGAGTCGAGTCTGCTGACATTACAATCTATTGATCTCCCCAGAGTTACCAAAGACATTACAATCTATTaGTCTCCCCAGAGTTACCAA +
Preference number: 2 (lower is better)
Translates to: VESSLLTLQSIDLPRVTKDITIY*SPQSYQ
Trigger: TTGGTAACTCTGGGGAGATCAATAGATTGTAATGTC...TTTGGTAACTCTGGGGAGATCAATAGATTGTAATGTCAGCAGACTCGACTCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316738.12
ENST00000555872.5
ENST00000556609.5
ENST00000557685.5
3UTR-3UTR TCA 90 bp AGGAGAGTTAGATGTCCTATGTCCTTTGACCTTCCCTTGTGTAATATGAAGAAATCACATTTCATCTCATaGCTGGGAAGCAAAAGCAGC +
Preference number: 2 (lower is better)
Translates to: RRVRCPMSFDLPLCNMKKSHFIS*LGSKSS
Trigger: GCTGCTTTTGCTTCCCAGTCATGAGATGAAATGTGA...TTTCTTCATATTACACAAGGGAAGGTCAAAGGACATAGGACATCTAACTCTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
3UTR-3UTR TCA 90 bp TGTAAGACTCTTCCAATCAGCATAACAGAAGAGCCTATTTGTTTTACCCAAGCTTCACATTTCATCTCATaGCTGGGAAGCAAAAGCAGC +
Preference number: 2 (lower is better)
Translates to: CKTLPISITEEPICFTQASHFIS*LGSKSS
Trigger: GCTGCTTTTGCTTCCCAGTCATGAGATGAAATGTGA...AGCTTGGGTAAAACAAATAGGCTCTTCTGTTATGCTGATTGGAAGAGTCTTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
3UTR-3UTR TCA 90 bp TCACAAGTCTGTAGCATGACATCATTAGTAGAGTCGAGTCTGCTGACATTACAAGACATTACAATCTATTaGTCTCCCCAGAGTTACCAA +
Preference number: 2 (lower is better)
Translates to: SQVCSMTSLVESSLLTLQDITIY*SPQSYQ
Trigger: TTGGTAACTCTGGGGAGATCAATAGATTGTAATGTC...TTGTAATGTCAGCAGACTCGACTCTACTAATGATGTCATGCTACAGACTTGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316738.12
ENST00000555872.5
ENST00000556609.5
ENST00000557685.5
3UTR-3UTR TCA 90 bp CTGATGTACATTTTACAAGGATCATTGCTGGACTTATTTATTGGGTGGAGAAGAGAAAGGAACTTGGGATaGCTTCCAGGTTTGTTGCAA +
Preference number: 2 (lower is better)
Translates to: LMYILQGSLLDLFIGWRRERNLG*LPGLLQ
Trigger: TTGCAACAAACCTGGAAGTCATCCCAAGTTCCTTTC...TCTTCTCCACCCAATAAATAAGTCCAGCAATGATCCTTGTAAAATGTACATCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556639.5
3UTR-3UTR GCA 90 bp AGGAGAGTTAGATGTCCTATGTCCTTTGACCTTCCCTTGTGTAATATGAAGAAAAGGGCATGGACCTTATaGACATTCACATTTCATCTC +
Preference number: 2 (lower is better)
Translates to: RRVRCPMSFDLPLCNMKKRAWTL*TFTFHL
Trigger: GAGATGAAATGTGAATGTGCATAAGGTCCATGCCCT...TTTCTTCATATTACACAAGGGAAGGTCAAAGGACATAGGACATCTAACTCTCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
3UTR-3UTR CCA 90 bp TGTTTTTATGGATGTTTCTATACCTGGAAGCAGGCAGATACTCAAAGACCAATAGTGCTTACAATGAGATaGAGAAGGTTCCTAGGCATG +
Preference number: 2 (lower is better)
Translates to: CFYGCFYTWKQADTQRPIVLTMR*RRFLGM
Trigger: CATGCCTAGGAACCTTCTCCATCTCATTGTAAGCAC...TATTGGTCTTTGAGTATCTGCCTGCTTCCAGGTATAGAAACATCCATAAAAACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
3UTR-3UTR TCA 90 bp GTCTGTAGCATGACATCATTAGTAGAGTCGAGTCTGCTGACATTACAATCTATTGACATTACAATCTATTaGTCTCCCCAGAGTTACCAA +
Preference number: 2 (lower is better)
Translates to: VCSMTSLVESSLLTLQSIDITIY*SPQSYQ
Trigger: TTGGTAACTCTGGGGAGATCAATAGATTGTAATGTC...AATAGATTGTAATGTCAGCAGACTCGACTCTACTAATGATGTCATGCTACAGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316738.12
ENST00000555872.5
ENST00000556609.5
ENST00000557685.5
3UTR-3UTR GCA 90 bp AGGAGAGTTAGATGTCCTATGTCCTTTGACCTTCCCTTGTGTAATATGAAGAAATTGGTGCCTCGATATTaGCACTTTACATCATCATGT +
Preference number: 2 (lower is better)
Translates to: RRVRCPMSFDLPLCNMKKLVPRY*HFTSSC
Trigger: ACATGATGATGTAAAGTGGCAATATCGAGGCACCAA...TTTCTTCATATTACACAAGGGAAGGTCAAAGGACATAGGACATCTAACTCTCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
3UTR-3UTR CCA 90 bp TTCTTACACCAAAAATATCAGGATATAACTTTAAACGTCTCCAGTCATGATGGGCTTTACATCATCATGTaGCAATCTGCCTGTGCACTC +
Preference number: 2 (lower is better)
Translates to: FLHQKYQDITLNVSSHDGLYIIM*QSACAL
Trigger: GAGTGCACAGGCAGATTGCCACATGATGATGTAAAG...CCCATCATGACTGGAGACGTTTAAAGTTATATCCTGATATTTTTGGTGTAAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
3UTR-3UTR CCA 90 bp AGAGAGTTTAAGAAGCACTGCCTTATAGGATGTAATATAAAACGAGCCTTTCCTGACTTCTGGTCAATATaGCAGAGTAAACACTTGCTG +
Preference number: 2 (lower is better)
Translates to: REFKKHCLIGCNIKRAFPDFWSI*QSKHLL
Trigger: CAGCAAGTGTTTACTCTGCCATATTGACCAGAAGTC...AGGAAAGGCTCGTTTTATATTACATCCTATAAGGCAGTGCTTCTTAAACTCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556639.5
3UTR-3UTR CCA 90 bp CTGATGTACATTTTACAAGGATCATTGCTGGACTTATTTATTGGGTGGAGAAGATTGACAGCTTGGATGTaGAGGGTAAGAAAAAGAAAG +
Preference number: 2 (lower is better)
Translates to: LMYILQGSLLDLFIGWRRLTAWM*RVRKRK
Trigger: CTTTCTTTTTCTTACCCTCCACATCCAAGCTGTCAA...TCTTCTCCACCCAATAAATAAGTCCAGCAATGATCCTTGTAAAATGTACATCAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556639.5
3UTR CAA 90 bp TATGCATTCCGTACACTTATAAATAAGAGTACTGATACCAGTATTTaGGAATTACCTTCACTAAATGCTGAGTGTCCAGCATTGCTGTTC +
Preference number: 2 (lower is better)
Translates to: YAFRTLINKSTDTSI*ELPSLNAECPALLF
Trigger: GAACAGCAATGCTGGACACTCAGCATTTAGTGAAGGTAATTCCAAAATACTGGTATCAGTACTCTTATTTATAAGTGTACGGAATGCATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
3UTR TCA 72 bp GGGGCAAAGGCAGAATCCTGGAGCTGGGTAAGAGGCTaGGATGGTGGTGGAGGTTTGCACTGGGTGACACAG +
Preference number: 3 (lower is better)
Translates to: GAKAESWSWVRG*DGGGGLHWVTQ
Trigger: CTGTGTCACCCAGTGCAAACCTCCACCACCATCTCAGCCTCTTACCCAGCTCCAGGATTCTGCCTTTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556639.5
3UTR CCA 72 bp GGCAGAATCCTGGAGCTGGGTAAGAGGCTGAGATGGTaGTGGAGGTTTGCACTGGGTGACACAGTGGAGGTG +
Preference number: 3 (lower is better)
Translates to: GRILELGKRLRW*WRFALGDTVEV
Trigger: CACCTCCACTGTGTCACCCAGTGCAAACCTCCACCACCATCTCAGCCTCTTACCCAGCTCCAGGATTCTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556639.5
3UTR CCA 72 bp GCAGGACAGGCAAGGCATGGGGAACGTGAACACACATaGCTAAGTGTCTGGGTGCAGGACGTGACTGCTAGA +
Preference number: 3 (lower is better)
Translates to: AGQARHGEREHT*LSVWVQDVTAR
Trigger: TCTAGCAGTCACGTCCTGCACCCAGACACTTAGCCATGTGTGTTCACGTTCCCCATGCCTTGCCTGTCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
3UTR TCA 72 bp AGGCCTCTTCCTGAGGGTCTGCCCAGAGTGGTTGTTTaGAGGGGATGTGGATTAAGCATGGATGTTGGGGGC +
Preference number: 3 (lower is better)
Translates to: RPLPEGLPRVVV*RGCGLSMDVGG
Trigger: GCCCCCAACATCCATGCTTAATCCACATCCCCTTCAAACAACCACTCTGGGCAGACCCTCAGGAAGAGGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556639.5
3UTR-3UTR CAA 90 bp ATGGATGTTGGGGGCGGTGTGTCCACACAGTGTGTAAGGCTCTTCACCATGGGGGTCCTTTCCGGTAATTaGGGAGCCACCTGCCTAAAT +
Preference number: 3 (lower is better)
Translates to: MDVGGGVSTQCVRLFTMGVLSGN*GATCLN
Trigger: ATTTAGGCAGGTGGCTCCCAAATTACCGGAAAGGAC...CCCCATGGTGAAGAGCCTTACACACTGTGTGGACACACCGCCCCCAACATCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000556639.5
3UTR GCA 72 bp GTGAGACTCCCAAGCCTAGACCATCCTAAAGGGTTCTaGAAACATGTCTCTTGCCCCCAGTACCCTCATCAC +
Preference number: 3 (lower is better)
Translates to: VRLPSLDHPKGF*KHVSCPQYPHH
Trigger: GTGATGAGGGTACTGGGGGCAAGAGACATGTTTGCAGAACCCTTTAGGATGGTCTAGGCTTGGGAGTCTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
3UTR GCA 72 bp ATTGCCACTTTACATCATCATGTGGCAATCTGCCTGTaGACTCAGGATCTTGGACGCTGGGTCAGGGCATGG +
Preference number: 3 (lower is better)
Translates to: IATLHHHVAICL*TQDLGRWVRAW
Trigger: CCATGCCCTGACCCAGCGTCCAAGATCCTGAGTGCACAGGCAGATTGCCACATGATGATGTAAAGTGGCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
3UTR CCA 72 bp TCATCATGTGGCAATCTGCCTGTGCACTCAGGATCTTaGACGCTGGGTCAGGGCATGGACCTTATGCACATT +
Preference number: 3 (lower is better)
Translates to: SSCGNLPVHSGS*TLGQGMDLMHI
Trigger: AATGTGCATAAGGTCCATGCCCTGACCCAGCGTCCAAGATCCTGAGTGCACAGGCAGATTGCCACATGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
3UTR-3UTR CAA 90 bp TTAGCCCAAGCCGATTTCTTTGTCTTGCACAGACAGTGCCCTGGGACCACTTTAAGGAAACTGGCACCATaGGCAGGAAAAGTCTGCCCC +
Preference number: 3 (lower is better)
Translates to: LAQADFFVLHRQCPGTTLRKLAP*AGKVCP
Trigger: GGGGCAGACTTTTCCTGCCAATGGTGCCAGTTTCCT...TAAAGTGGTCCCAGGGCACTGTCTGTGCAAGACAAAGAAATCGGCTTGGGCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
3UTR-3UTR CAA 90 bp GATGGGAGCATTTGGTGCCTCGATATTGCCACTTTACATCATCATGTGGCAATCTGTGCACTCAGGATCTaGGACGCTGGGTCAGGGCAT +
Preference number: 3 (lower is better)
Translates to: DGSIWCLDIATLHHHVAICALRI*DAGSGH
Trigger: ATGCCCTGACCCAGCGTCCAAGATCCTGAGTGCACA...GATTGCCACATGATGATGTAAAGTGGCAATATCGAGGCACCAAATGCTCCCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
3UTR-3UTR CAA 90 bp ATGGATGTTGGGGGCGGTGTGTCCACACAGTGTGTAAGGCTCTTCACCATGGGGTTCGTTCCGATATCGTaGAGCTTCCTTCTTTTTCCT +
Preference number: 3 (lower is better)
Translates to: MDVGGGVSTQCVRLFTMGFVPIS*SFLLFP
Trigger: AGGAAAAAGAAGGAAGCTCAACGATATCGGAACGAA...CCCCATGGTGAAGAGCCTTACACACTGTGTGGACACACCGCCCCCAACATCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000556639.5
3UTR GCA 72 bp ATTCTTTCTTCTCTGGACCGACAAGAGTTTTCCCTTTaGAGGCCTCTTCCTGAGGGTCTGCCCAGAGTGGTT +
Preference number: 3 (lower is better)
Translates to: ILSSLDRQEFSL*RPLPEGLPRVV
Trigger: AACCACTCTGGGCAGACCCTCAGGAAGAGGCCTGCAAAGGGAAAACTCTTGTCGGTCCAGAGAAGAAAGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556639.5
3UTR-3UTR CAA 90 bp CTAAATGCTGAGTGTCCAGCATTGCTGTTCTTGCTCCAGTATAGCAGTTACTGGAGGAAACTGGCACCATaGGCAGGAAAAGTCTGCCCC +
Preference number: 3 (lower is better)
Translates to: LNAECPALLFLLQYSSYWRKLAP*AGKVCP
Trigger: GGGGCAGACTTTTCCTGCCAATGGTGCCAGTTTCCT...CCAGTAACTGCTATACTGGAGCAAGAACAGCAATGCTGGACACTCAGCATTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
3UTR-3UTR CAA 90 bp GCCCGAGAGGGCTTGCTCATGTTAGCCCAAGCCGATTTCTTTGTCTTGCACAGAGGCCTGGCTGATTGCTaGGAACATAGTAAGTATTCT +
Preference number: 3 (lower is better)
Translates to: AREGLLMLAQADFFVLHRGLADC*EHSKYS
Trigger: AGAATACTTACTATGTTCCAAGCAATCAGCCAGGCC...TCTGTGCAAGACAAAGAAATCGGCTTGGGCTAACATGAGCAAGCCCTCTCGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
3UTR-3UTR CAA 90 bp CTAAATGCTGAGTGTCCAGCATTGCTGTTCTTGCTCCAGTATAGCAGTTACTGGGCCGATTTCTTTGTCTaGCACAGACAGTGCCCTGGG +
Preference number: 3 (lower is better)
Translates to: LNAECPALLFLLQYSSYWADFFV*HRQCPG
Trigger: CCCAGGGCACTGTCTGTGCAAGACAAAGAAATCGGC...CCAGTAACTGCTATACTGGAGCAAGAACAGCAATGCTGGACACTCAGCATTTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
3UTR GCA 72 bp CAGGATCTTGGACGCTGGGTCAGGGCATGGACCTTATaGACATTCACATTTCATCTCATGACTGGGAAGCAA +
Preference number: 3 (lower is better)
Translates to: QDLGRWVRAWTL*TFTFHLMTGKQ
Trigger: TTGCTTCCCAGTCATGAGATGAAATGTGAATGTGCATAAGGTCCATGCCCTGACCCAGCGTCCAAGATCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
3UTR CCA 72 bp GGTGAAACCCCTTCTCTACTAAAAATTAGCCGGGTGTaGCGGTACACACCTGTAAACCCAGATACTCAGGAG +
Preference number: 3 (lower is better)
Translates to: GETPSLLKISRV*RYTPVNPDTQE
Trigger: CTCCTGAGTATCTGGGTTTACAGGTGTGTACCGCCACACCCGGCTAATTTTTAGTAGAGAAGGGGTTTCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
3UTR-3UTR CAA 90 bp TACTTCTTCGGTCATGCCATTCACACAGAAGGTATAGCTGATGACTGTTATCTAGCTTCCCAGAGCTTTTaGCCAACTGACAGGTGGTGG +
Preference number: 3 (lower is better)
Translates to: YFFGHAIHTEGIADDCYLASQSF*PTDRWW
Trigger: CCACCACCTGTCAGTTGGCAAAAAGCTCTGGGAAGC...TAGATAACAGTCATCAGCTATACCTTCTGTGTGAATGGCATGACCGAAGAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
3UTR TCA 72 bp CATTGCTGGACTTATTTATTGGGTGGAGAAGAGACCTaGAGTAGATTGATGGGGGCAAAGGCAGAATCCTGG +
Preference number: 3 (lower is better)
Translates to: HCWTYLLGGEET*SRLMGAKAESW
Trigger: CCAGGATTCTGCCTTTGCCCCCATCAATCTACTTCAGGTCTCTTCTCCACCCAATAAATAAGTCCAGCAATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556639.5
3UTR CCA 72 bp GCAGCTTCCCAGAGCTTTTTGCCAACTGACAGGTGGTaGGAATGTACAAATAGCAGTGCTTACAATGAGATG +
Preference number: 3 (lower is better)
Translates to: AASQSFLPTDRW*ECTNSSAYNEM
Trigger: CATCTCATTGTAAGCACTGCTATTTGTACATTCCCACCACCTGTCAGTTGGCAAAAAGCTCTGGGAAGCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
3UTR-3UTR CAA 90 bp TATAGCCCGAGAGGGCTTGCTCATGTTAGCCCAAGCCGATTTCTTTGTCTTGCACTTTACAGTGATGATTaGGACTCAGGGACATTATCT +
Preference number: 3 (lower is better)
Translates to: YSPRGLAHVSPSRFLCLALYSDD*DSGTLS
Trigger: AGATAATGTCCCTGAGTCCAAATCATCACTGTAAAG...TGCAAGACAAAGAAATCGGCTTGGGCTAACATGAGCAAGCCCTCTCGGGCTATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
3UTR-3UTR CAA 90 bp TTGGGACCTCAAGAAGTCTACTTCTTCGGTCATGCCATTCACACAGAAGGTATAATGATACTCCACAAGTaGGCTGCTGGCAGAAAGGAA +
Preference number: 3 (lower is better)
Translates to: LGPQEVYFFGHAIHTEGIMILHK*AAGRKE
Trigger: TTCCTTTCTGCCAGCAGCCAACTTGTGGAGTATCAT...TATACCTTCTGTGTGAATGGCATGACCGAAGAAGTAGACTTCTTGAGGTCCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
3UTR-3UTR CAA 90 bp TTCTTACACCAAAAATATCAGGATATAACTTTAAACGTCTCCAGTCATGATGGGTGTGCACTCAGGATCTaGGACGCTGGGTCAGGGCAT +
Preference number: 3 (lower is better)
Translates to: FLHQKYQDITLNVSSHDGCALRI*DAGSGH
Trigger: ATGCCCTGACCCAGCGTCCAAGATCCTGAGTGCACA...CCCATCATGACTGGAGACGTTTAAAGTTATATCCTGATATTTTTGGTGTAAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
3UTR GCA 72 bp ACTTTAAACGTCTCCAGTCATGATGGGAGCATTTGGTaGCTCGATATTGCCACTTTACATCATCATGTGGCA +
Preference number: 3 (lower is better)
Translates to: TLNVSSHDGSIW*LDIATLHHHVA
Trigger: TGCCACATGATGATGTAAAGTGGCAATATCGAGGCACCAAATGCTCCCATCATGACTGGAGACGTTTAAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
3UTR-3UTR CAA 90 bp AGAGAGTTTAAGAAGCACTGCCTTATAGGATGTAATATAAAACGAGCCTTTCCTGCCCAGAGTGGTTGTTaGAAGGGGATGTGGATTAAG +
Preference number: 3 (lower is better)
Translates to: REFKKHCLIGCNIKRAFPAQSGC*KGMWIK
Trigger: CTTAATCCACATCCCCTTCAAACAACCACTCTGGGC...AGGAAAGGCTCGTTTTATATTACATCCTATAAGGCAGTGCTTCTTAAACTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556639.5
3UTR TCA 72 bp TGGAAATTTTCTCTTGTTAGAGATGGACCAGGAAAATaGTACTCCACAAGTTGGCTGCTGGCAGAAAGGAAT +
Preference number: 3 (lower is better)
Translates to: WKFSLVRDGPGK*YSTSWLLAERN
Trigger: ATTCCTTTCTGCCAGCAGCCAACTTGTGGAGTATCATTTTCCTGGTCCATCTCTAACAAGAGAAAATTTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
3UTR-3UTR CAA 90 bp AGAGAGTTTAAGAAGCACTGCCTTATAGGATGTAATATAAAACGAGCCTTTCCTTGGCAGAGTAAACACTaGCTGAAAATCCTTAGGCCT +
Preference number: 3 (lower is better)
Translates to: REFKKHCLIGCNIKRAFPWQSKH*LKILRP
Trigger: AGGCCTAAGGATTTTCAGCAAGTGTTTACTCTGCCA...AGGAAAGGCTCGTTTTATATTACATCCTATAAGGCAGTGCTTCTTAAACTCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556639.5
3UTR TCA 72 bp AAGTTAAAAATCCACGATAGTAGGTGTCAAAGGCTGTaGAGATGTGTCTTACTTCGTTCCGATATCGTTGAG +
Preference number: 3 (lower is better)
Translates to: KLKIHDSRCQRL*RCVLLRSDIVE
Trigger: CTCAACGATATCGGAACGAAGTAAGACACATCTTCACAGCCTTTGACACCTACTATCGTGGATTTTTAACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556639.5
3UTR-3UTR CAA 90 bp CATGAAATAAAAGTTGGGACCTCAAGAAGTCTACTTCTTCGGTCATGCCATTCAGTGATCTTACTGAAGTaGCATGATCATACACAGAAT +
Preference number: 3 (lower is better)
Translates to: HEIKVGTSRSLLLRSCHSVILLK*HDHTQN
Trigger: ATTCTGTGTATGATCATGCAACTTCAGTAAGATCAC...TGAATGGCATGACCGAAGAAGTAGACTTCTTGAGGTCCCAACTTTTATTTCATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
3UTR TCA 72 bp AAAATATCAGGATATAACTTTAAACGTCTCCAGTCATaGTGGGAGCATTTGGTGCCTCGATATTGCCACTTT +
Preference number: 3 (lower is better)
Translates to: KISGYNFKRLQS*WEHLVPRYCHF
Trigger: AAAGTGGCAATATCGAGGCACCAAATGCTCCCATCATGACTGGAGACGTTTAAAGTTATATCCTGATATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
CDS-3UTR TCA 90 bp ATGGATGTTGGGGGCGGTGTGTCCACACAGTGTGTAAGGCTCTTCACCATGGGGGGTGAGGGGTGTGCCTaGATGATGGAGTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: MDVGGGVSTQCVRLFTMGGEGCA*MMESAA
Trigger: AGCAGCTGACTCCATCATTCAGGCACACCCCTCACC...CCCCATGGTGAAGAGCCTTACACACTGTGTGGACACACCGCCCCCAACATCCAT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000556639.5
CDS-3UTR TCA 90 bp AGGTTTGCACTGGGTGACACAGTGGAGGTGCTGAGAGGTGGTCAGAGTCGAGATACACAGTGGAGGTGCTaGGAGGTGGTCAGAGTCGAG +
Preference number: 4 (lower is better)
Translates to: RFALGDTVEVLRGGQSRDTQWRC*EVVRVE
Trigger: CTCGACTCTGACCACCTCTCAGCACCTCCACTGTGT...ATCTCGACTCTGACCACCTCTCAGCACCTCCACTGTGTCACCCAGTGCAAACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556639.5
CDS-3UTR GCA 90 bp AGAGTGAGGAGGAGGAGGACCACCAGTGCCATCCCTAGCCCCAGCTCTAGCAATGCTGGAGTGCGACAGTaGAATCATGGCTCACTGAAG +
Preference number: 4 (lower is better)
Translates to: RVRRRRTTSAIPSPSSSNAGVRQ*NHGSLK
Trigger: CTTCAGTGAGCCATGATTGCACTGTCGCACTCCAGC...ATTGCTAGAGCTGGGGCTAGGGATGGCACTGGTGGTCCTCCTCCTCCTCACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR CCA 90 bp AAAGGGTTCTGCAAACATGTCTCTTGCCCCCAGTACCCTCATCACCCTGTTCTTCCCACGTCCGCGACCTaGCTCTGGCCTCGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: KGFCKHVSCPQYPHHPVLPTSAT*LWPRRR
Trigger: TCTTCTCCGAGGCCAGAGCCAGGTCGCGGACGTGGG...AAGAACAGGGTGATGAGGGTACTGGGGGCAAGAGACATGTTTGCAGAACCCTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000316738.12
CDS-3UTR CCA 90 bp CTCAAGGCTTGCTTCTCCACAGTGAGACTCCCAAGCCTAGACCATCCTAAAGGGGTGAGTAGAGCACCGTaGCCTGCAGTGTGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: LKACFSTVRLPSLDHPKGVSRAP*PAVWRG
Trigger: CCCTCTCCACACTGCAGGCCACGGTGCTCTACTCAC...CCCTTTAGGATGGTCTAGGCTTGGGAGTCTCACTGTGGAGAAGCAAGCCTTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR CCA 90 bp AGAGTGAGGAGGAGGAGGACCACCAGTGCCATCCCTAGCCCCAGCTCTAGCAATACATGGCTAAGTGTCTaGGTGCAGGACGTGACTGCT +
Preference number: 4 (lower is better)
Translates to: RVRRRRTTSAIPSPSSSNTWLSV*VQDVTA
Trigger: AGCAGTCACGTCCTGCACCCAGACACTTAGCCATGT...ATTGCTAGAGCTGGGGCTAGGGATGGCACTGGTGGTCCTCCTCCTCCTCACTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR CCA 90 bp CATGCAGAGAAAAATGCCAGCCAGAAATACCACAGGGTGTTGATGGCAGGCAAACCCACGTCCGCGACCTaGCTCTGGCCTCGGAGAAGA +
Preference number: 4 (lower is better)
Translates to: HAEKNASQKYHRVLMAGKPTSAT*LWPRRR
Trigger: TCTTCTCCGAGGCCAGAGCCAGGTCGCGGACGTGGG...TTTGCCTGCCATCAACACCCTGTGGTATTTCTGGCTGGCATTTTTCTCTGCATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538485.6
CDS-3UTR CCA 90 bp AGAGTGAGGAGGAGGAGGACCACCAGTGCCATCCCTAGCCCCAGCTCTAGCAATCTCTATCATCCAGGCTaGAGTGCGACAGTGCAATCA +
Preference number: 4 (lower is better)
Translates to: RVRRRRTTSAIPSPSSSNLYHPG*SATVQS
Trigger: TGATTGCACTGTCGCACTCCAGCCTGGATGATAGAG...ATTGCTAGAGCTGGGGCTAGGGATGGCACTGGTGGTCCTCCTCCTCCTCACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR CCA 90 bp TCGATATTGCCACTTTACATCATCATGTGGCAATCTGCCTGTGCACTCAGGATCCTTTCCCAGCCTGGCTaGCAGCCTACCGCGGCCACG +
Preference number: 4 (lower is better)
Translates to: SILPLYIIMWQSACALRILSQPG*QPTAAT
Trigger: CGTGGCCGCGGTAGGCTGCCAGCCAGGCTGGGAAAG...GATCCTGAGTGCACAGGCAGATTGCCACATGATGATGTAAAGTGGCAATATCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538485.6
CDS-3UTR CCA 90 bp GAGATGGACCAGGAAAATGATACTCCACAAGTTGGCTGCTGGCAGAAAGGAATTACCGCTTTCCCAGCCTaGCTGGCAGCCTACCGCGGC +
Preference number: 4 (lower is better)
Translates to: EMDQENDTPQVGCWQKGITAFPA*LAAYRG
Trigger: GCCGCGGTAGGCTGCCAGCCAGGCTGGGAAAGCGGT...AATTCCTTTCTGCCAGCAGCCAACTTGTGGAGTATCATTTTCCTGGTCCATCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000538485.6
CDS-3UTR TCA 90 bp CAGACGTCAGTACTCCCCTGTGCCATAGATGTTCCACATGAACCTCCAGGAAATTTGCAGGCCTCTTCCTaGGGGTCTGCCCAGAGTGGT +
Preference number: 4 (lower is better)
Translates to: QTSVLPCAIDVPHEPPGNLQASS*GSAQSG
Trigger: ACCACTCTGGGCAGACCCTCAGGAAGAGGCCTGCAA...ATTTCCTGGAGGTTCATGTGGAACATCTATGGCACAGGGGAGTACTGACGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556639.5
CDS-3UTR CCA 90 bp GCAAAAGCAGCTTCCCAGAGCTTTTTGCCAACTGACAGGTGGTGGGAATGTACATCCGCGACCTGGCTCTaGCCTCGGAGAAGAACATCG +
Preference number: 4 (lower is better)
Translates to: AKAASQSFLPTDRWWECTSATWL*PRRRTS
Trigger: CGATGTTCTTCTCCGAGGCCAGAGCCAGGTCGCGGA...TGTACATTCCCACCACCTGTCAGTTGGCAAAAAGCTCTGGGAAGCTGCTTTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000538485.6
CDS-3UTR CCA 90 bp ATTCTTTCTTCTCTGGACCGACAAGAGTTTTCCCTTTGCAGGCCTCTTCCTGAGTGTGTTCCGAGGGACTaGCTTCCCACGTCCGCGACC +
Preference number: 4 (lower is better)
Translates to: ILSSLDRQEFSLCRPLPECVPRD*LPTSAT
Trigger: GGTCGCGGACGTGGGAAGCCAGTCCCTCGGAACACA...CTCAGGAAGAGGCCTGCAAAGGGAAAACTCTTGTCGGTCCAGAGAAGAAAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556639.5
CDS-3UTR TCA 90 bp AGAGTGAGGAGGAGGAGGACCACCAGTGCCATCCCTAGCCCCAGCTCTAGCAATAGGTGTCAAAGGCTGTaGAGATGTGTCTTACTTCGT +
Preference number: 4 (lower is better)
Translates to: RVRRRRTTSAIPSPSSSNRCQRL*RCVLLR
Trigger: ACGAAGTAAGACACATCTTCACAGCCTTTGACACCT...ATTGCTAGAGCTGGGGCTAGGGATGGCACTGGTGGTCCTCCTCCTCCTCACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR TCA 90 bp AGGTTTGCACTGGGTGACACAGTGGAGGTGCTGAGAGGTGGTCAGAGTCGAGATGGGATTGGAAGACTTTaGAAGCATAGTGGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: RFALGDTVEVLRGGQSRDGIGRL*KHSGSG
Trigger: GCCAGAGCCACTATGCTTTCAAAGTCTTCCAATCCC...ATCTCGACTCTGACCACCTCTCAGCACCTCCACTGTGTCACCCAGTGCAAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556639.5
CDS-3UTR GCA 90 bp CCCTGTTCTTCCTCTGTATATAGCCCGAGAGGGCTTGCTCATGTTAGCCCAAGCGTCTTGCACAGACAGTaGCCTGGGACCACTTTACAG +
Preference number: 4 (lower is better)
Translates to: PCSSSVYSPRGLAHVSPSVLHRQ*PGTTLQ
Trigger: CTGTAAAGTGGTCCCAGGGCACTGTCTGTGCAAGAC...GCTTGGGCTAACATGAGCAAGCCCTCTCGGGCTATATACAGAGGAAGAACAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR GCA 90 bp GCCCGAGAGGGCTTGCTCATGTTAGCCCAAGCCGATTTCTTTGTCTTGCACAGATTGCCCAGACTGGAGTaGAGTGGCACCATTTCAGCT +
Preference number: 4 (lower is better)
Translates to: AREGLLMLAQADFFVLHRLPRLE*SGTISA
Trigger: AGCTGAAATGGTGCCACTGCACTCCAGTCTGGGCAA...TCTGTGCAAGACAAAGAAATCGGCTTGGGCTAACATGAGCAAGCCCTCTCGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316738.12
CDS-3UTR GCA 90 bp AGGTTTGCACTGGGTGACACAGTGGAGGTGCTGAGAGGTGGTCAGAGTCGAGATCTCTTCCTGAGGGTCTaGCCAGAGTGGTTGTTTGAA +
Preference number: 4 (lower is better)
Translates to: RFALGDTVEVLRGGQSRDLFLRV*PEWLFE
Trigger: TTCAAACAACCACTCTGGGCAGACCCTCAGGAAGAG...ATCTCGACTCTGACCACCTCTCAGCACCTCCACTGTGTCACCCAGTGCAAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556639.5
CDS-3UTR CCA 90 bp CTAAATGCTGAGTGTCCAGCATTGCTGTTCTTGCTCCAGTATAGCAGTTACTGGTGTGTTCCGAGGGACTaGCTTCCCACGTCCGCGACC +
Preference number: 4 (lower is better)
Translates to: LNAECPALLFLLQYSSYWCVPRD*LPTSAT
Trigger: GGTCGCGGACGTGGGAAGCCAGTCCCTCGGAACACA...CCAGTAACTGCTATACTGGAGCAAGAACAGCAATGCTGGACACTCAGCATTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316738.12
CDS-3UTR CCA 90 bp AGAGAAAAATGCCAGCCAGAAATACCACAGGGTGTTGATGGCAGGCAAAGTCAATGTGTTCCGAGGGACTaGCTTCCCACGTCCGCGACC +
Preference number: 4 (lower is better)
Translates to: REKCQPEIPQGVDGRQSQCVPRD*LPTSAT
Trigger: GGTCGCGGACGTGGGAAGCCAGTCCCTCGGAACACA...TTGACTTTGCCTGCCATCAACACCCTGTGGTATTTCTGGCTGGCATTTTTCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000538485.6
CDS-3UTR CCA 90 bp CCTCTGTATATAGCCCGAGAGGGCTTGCTCATGTTAGCCCAAGCCGATTTCTTTAGAAACCAGGGGGTATaGAGCAGAGGGCAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: PLYIAREGLLMLAQADFFRNQGV*SRGQLS
Trigger: GCTCAGCTGCCCTCTGCTCCATACCCCCTGGTTTCT...AAAGAAATCGGCTTGGGCTAACATGAGCAAGCCCTCTCGGGCTATATACAGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR CCA 90 bp CCCTGTTCTTCCTCTGTATATAGCCCGAGAGGGCTTGCTCATGTTAGCCCAAGCACATGGCTAAGTGTCTaGGTGCAGGACGTGACTGCT +
Preference number: 4 (lower is better)
Translates to: PCSSSVYSPRGLAHVSPSTWLSV*VQDVTA
Trigger: AGCAGTCACGTCCTGCACCCAGACACTTAGCCATGT...GCTTGGGCTAACATGAGCAAGCCCTCTCGGGCTATATACAGAGGAAGAACAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR CCA 90 bp CCATGCAGAGAAAAATGCCAGCCAGAAATACCACAGGGTGTTGATGGCAGGCAAGTGCACTCAGGATCTTaGACGCTGGGTCAGGGCATG +
Preference number: 4 (lower is better)
Translates to: PCREKCQPEIPQGVDGRQVHSGS*TLGQGM
Trigger: CATGCCCTGACCCAGCGTCCAAGATCCTGAGTGCAC...TTGCCTGCCATCAACACCCTGTGGTATTTCTGGCTGGCATTTTTCTCTGCATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
CDS-3UTR TCA 90 bp GCCCGAGAGGGCTTGCTCATGTTAGCCCAAGCCGATTTCTTTGTCTTGCACAGAGCTGACGTGACCATCTaGATCTCGATCTACTTCCCT +
Preference number: 4 (lower is better)
Translates to: AREGLLMLAQADFFVLHRADVTI*ISIYFP
Trigger: AGGGAAGTAGATCGAGATTCAGATGGTCACGTCAGC...TCTGTGCAAGACAAAGAAATCGGCTTGGGCTAACATGAGCAAGCCCTCTCGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR TCA 90 bp TATAGCCCGAGAGGGCTTGCTCATGTTAGCCCAAGCCGATTTCTTTGTCTTGCAGCAATCATGGCTCACTaGAGCTTCAAACCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: YSPRGLAHVSPSRFLCLAAIMAH*SFKPLG
Trigger: GCCCAGGGGTTTGAAGCTTCAGTGAGCCATGATTGC...TGCAAGACAAAGAAATCGGCTTGGGCTAACATGAGCAAGCCCTCTCGGGCTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR TCA 90 bp ATGGATGTTGGGGGCGGTGTGTCCACACAGTGTGTAAGGCTCTTCACCATGGGGAAATCCTTAGGCCTCTaGATACCTCAAGAACAGTCC +
Preference number: 4 (lower is better)
Translates to: MDVGGGVSTQCVRLFTMGKSLGL*IPQEQS
Trigger: GGACTGTTCTTGAGGTATTCAGAGGCCTAAGGATTT...CCCCATGGTGAAGAGCCTTACACACTGTGTGGACACACCGCCCCCAACATCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556639.5
CDS-3UTR GCA 90 bp CCCTGTTCTTCCTCTGTATATAGCCCGAGAGGGCTTGCTCATGTTAGCCCAAGCTGCAAACATGTCTCTTaGCCCCAGTACCCTCATCAC +
Preference number: 4 (lower is better)
Translates to: PCSSSVYSPRGLAHVSPSCKHVS*PQYPHH
Trigger: GTGATGAGGGTACTGGGGGCAAGAGACATGTTTGCA...GCTTGGGCTAACATGAGCAAGCCCTCTCGGGCTATATACAGAGGAAGAACAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR GCA 90 bp TATAGCCCGAGAGGGCTTGCTCATGTTAGCCCAAGCCGATTTCTTTGTCTTGCATTCATGCTATTCTCCTaGCTCAGCCTCCCGAGCAGC +
Preference number: 4 (lower is better)
Translates to: YSPRGLAHVSPSRFLCLAFMLFS*LSLPSS
Trigger: GCTGCTCGGGAGGCTGAGGCAGGAGAATAGCATGAA...TGCAAGACAAAGAAATCGGCTTGGGCTAACATGAGCAAGCCCTCTCGGGCTATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316738.12
CDS-3UTR CCA 90 bp AGAGTGAGGAGGAGGAGGACCACCAGTGCCATCCCTAGCCCCAGCTCTAGCAATGCCTGGCTGATTGCTTaGAACATAGTAAGTATTCTG +
Preference number: 4 (lower is better)
Translates to: RVRRRRTTSAIPSPSSSNAWLIA*NIVSIL
Trigger: CAGAATACTTACTATGTTCCAAGCAATCAGCCAGGC...ATTGCTAGAGCTGGGGCTAGGGATGGCACTGGTGGTCCTCCTCCTCCTCACTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR TCA 90 bp ACATCATTAGTAGAGTCGAGTCTGCTGACATTACAATCTATTGATCTCCCCAGACTAGCAATGGCGGCCTaGCTCAGGGCTGCTGGCCAC +
Preference number: 4 (lower is better)
Translates to: TSLVESSLLTLQSIDLPRLAMAA*LRAAGH
Trigger: GTGGCCAGCAGCCCTGAGTCAGGCCGCCATTGCTAG...TCTGGGGAGATCAATAGATTGTAATGTCAGCAGACTCGACTCTACTAATGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR GCA 90 bp TTAGCCCAAGCCGATTTCTTTGTCTTGCACAGACAGTGCCCTGGGACCACTTTAGCTGGAGTGCGACAGTaGAATCATGGCTCACTGAAG +
Preference number: 4 (lower is better)
Translates to: LAQADFFVLHRQCPGTTLAGVRQ*NHGSLK
Trigger: CTTCAGTGAGCCATGATTGCACTGTCGCACTCCAGC...TAAAGTGGTCCCAGGGCACTGTCTGTGCAAGACAAAGAAATCGGCTTGGGCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR GCA 90 bp CCTCTGTATATAGCCCGAGAGGGCTTGCTCATGTTAGCCCAAGCCGATTTCTTTTCATCCAGGCTGGAGTaGGACAGTGCAATCATGGCT +
Preference number: 4 (lower is better)
Translates to: PLYIAREGLLMLAQADFFSSRLE*DSAIMA
Trigger: AGCCATGATTGCACTGTCGCACTCCAGCCTGGATGA...AAAGAAATCGGCTTGGGCTAACATGAGCAAGCCCTCTCGGGCTATATACAGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR GCA 90 bp TATAGCCCGAGAGGGCTTGCTCATGTTAGCCCAAGCCGATTTCTTTGTCTTGCAACCATTTCAGCTCACTaGAAGCTCTGCCTCCCAGGT +
Preference number: 4 (lower is better)
Translates to: YSPRGLAHVSPSRFLCLATISAH*KLCLPG
Trigger: ACCTGGGAGGCAGAGCTTGCAGTGAGCTGAAATGGT...TGCAAGACAAAGAAATCGGCTTGGGCTAACATGAGCAAGCCCTCTCGGGCTATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000316738.12
CDS-3UTR GCA 90 bp CCTCAAGAAGTCTACTTCTTCGGTCATGCCATTCACACAGAAGGTATAGCTGATGGGAGCCAGGAGCCCTaGAGCTCCAGGATCAGTCAT +
Preference number: 4 (lower is better)
Translates to: PQEVYFFGHAIHTEGIADGSQEP*SSRISH
Trigger: ATGACTGATCCTGGAGCTGCAGGGCTCCTGGCTCCC...ATCAGCTATACCTTCTGTGTGAATGGCATGACCGAAGAAGTAGACTTCTTGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556005.1
CDS-3UTR CCA 90 bp CTCAAGGCTTGCTTCTCCACAGTGAGACTCCCAAGCCTAGACCATCCTAAAGGGAAAATTAGCCGGGTGTaGCGGTACACACCTGTAAAC +
Preference number: 4 (lower is better)
Translates to: LKACFSTVRLPSLDHPKGKISRV*RYTPVN
Trigger: GTTTACAGGTGTGTACCGCCACACCCGGCTAATTTT...CCCTTTAGGATGGTCTAGGCTTGGGAGTCTCACTGTGGAGAAGCAAGCCTTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR CCA 90 bp TCGATATTGCCACTTTACATCATCATGTGGCAATCTGCCTGTGCACTCAGGATCGTGCACTCAGGATCTTaGACGCTGGGTCAGGGCATG +
Preference number: 4 (lower is better)
Translates to: SILPLYIIMWQSACALRIVHSGS*TLGQGM
Trigger: CATGCCCTGACCCAGCGTCCAAGATCCTGAGTGCAC...GATCCTGAGTGCACAGGCAGATTGCCACATGATGATGTAAAGTGGCAATATCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
CDS-3UTR CCA 90 bp CAGACGTCAGTACTCCCCTGTGCCATAGATGTTCCACATGAACCTCCAGGAAATGGTAAGAGGCTGAGATaGTGGTGGAGGTTTGCACTG +
Preference number: 4 (lower is better)
Translates to: QTSVLPCAIDVPHEPPGNGKRLR*WWRFAL
Trigger: CAGTGCAAACCTCCACCACCATCTCAGCCTCTTACC...ATTTCCTGGAGGTTCATGTGGAACATCTATGGCACAGGGGAGTACTGACGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556639.5
CDS-3UTR TCA 90 bp CTCAAGGCTTGCTTCTCCACAGTGAGACTCCCAAGCCTAGACCATCCTAAAGGGAGGTGTCAAAGGCTGTaGAGATGTGTCTTACTTCGT +
Preference number: 4 (lower is better)
Translates to: LKACFSTVRLPSLDHPKGRCQRL*RCVLLR
Trigger: ACGAAGTAAGACACATCTTCACAGCCTTTGACACCT...CCCTTTAGGATGGTCTAGGCTTGGGAGTCTCACTGTGGAGAAGCAAGCCTTGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR TCA 90 bp GCCCGAGAGGGCTTGCTCATGTTAGCCCAAGCCGATTTCTTTGTCTTGCACAGATCTCTAAAGCTGACGTaGCCATCTGAATCTCGATCT +
Preference number: 4 (lower is better)
Translates to: AREGLLMLAQADFFVLHRSLKLT*PSESRS
Trigger: AGATCGAGATTCAGATGGTCACGTCAGCTTTAGAGA...TCTGTGCAAGACAAAGAAATCGGCTTGGGCTAACATGAGCAAGCCCTCTCGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR TCA 90 bp GTAGAGTCGAGTCTGCTGACATTACAATCTATTGATCTCCCCAGAGTTACCAAATCTGGGTGCAGGACGTaGCTGCTAGAAACCAGGGGG +
Preference number: 4 (lower is better)
Translates to: VESSLLTLQSIDLPRVTKSGCRT*LLETRG
Trigger: CCCCCTGGTTTCTAGCAGTCACGTCCTGCACCCAGA...TTTGGTAACTCTGGGGAGATCAATAGATTGTAATGTCAGCAGACTCGACTCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR TCA 90 bp GCAAAAGCAGCTTCCCAGAGCTTTTTGCCAACTGACAGGTGGTGGGAATGTACAGAGCTTTTTGCCAACTaGCAGGTGGTGGGAATGTAC +
Preference number: 4 (lower is better)
Translates to: AKAASQSFLPTDRWWECTELFAN*QVVGMY
Trigger: GTACATTCCCACCACCTGTCAGTTGGCAAAAAGCTC...TGTACATTCCCACCACCTGTCAGTTGGCAAAAAGCTCTGGGAAGCTGCTTTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
CDS-3UTR TCA 90 bp CTGCTGACATTACAATCTATTGATCTCCCCAGAGTTACCAAAAGTAGTTCACAAGCACACCCGGCAGAGTaGGACCCAGACACGGGAGAG +
Preference number: 4 (lower is better)
Translates to: LLTLQSIDLPRVTKSSSQAHPAE*DPDTGE
Trigger: CTCTCCCGTGTCTGGGTCTCACTCTGCCGGGTGTGC...TTGTGAACTACTTTTGGTAACTCTGGGGAGATCAATAGATTGTAATGTCAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000555872.5
CDS-3UTR TCA 90 bp CAGACGTCAGTACTCCCCTGTGCCATAGATGTTCCACATGAACCTCCAGGAAATAGAGTCGAGATTTGTTaGCAGCTTGGATGTGGAGGG +
Preference number: 4 (lower is better)
Translates to: QTSVLPCAIDVPHEPPGNRVEIC*QLGCGG
Trigger: CCCTCCACATCCAAGCTGTCAACAAATCTCGACTCT...ATTTCCTGGAGGTTCATGTGGAACATCTATGGCACAGGGGAGTACTGACGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556639.5
CDS-3UTR GCA 90 bp TGCCTGTGCACTCAGGATCTTGGACGCTGGGTCAGGGCATGGACCTTATGCACAGCCGAAGTTAAATCATaGACTGAAAATGCCTCTGAA +
Preference number: 4 (lower is better)
Translates to: CLCTQDLGRWVRAWTLCTAEVKS*TENASE
Trigger: TTCAGAGGCATTTTCAGTGCATGATTTAACTTCGGC...TGTGCATAAGGTCCATGCCCTGACCCAGCGTCCAAGATCCTGAGTGCACAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
CDS-3UTR GCA 90 bp CATATCCATGCAGAGAAAAATGCCAGCCAGAAATACCACAGGGTGTTGATGGCAGTGGCAATCTGCCTGTaGACTCAGGATCTTGGACGC +
Preference number: 4 (lower is better)
Translates to: HIHAEKNASQKYHRVLMAVAICL*TQDLGR
Trigger: GCGTCCAAGATCCTGAGTGCACAGGCAGATTGCCAC...TGCCATCAACACCCTGTGGTATTTCTGGCTGGCATTTTTCTCTGCATGGATATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
CDS-3UTR GCA 90 bp TCGATATTGCCACTTTACATCATCATGTGGCAATCTGCCTGTGCACTCAGGATCAGCCCAGGTCTTATCTaGACACCCGGCAGAGTGAGA +
Preference number: 4 (lower is better)
Translates to: SILPLYIIMWQSACALRISPGLI*TPGRVR
Trigger: TCTCACTCTGCCGGGTGTGCAGATAAGACCTGGGCT...GATCCTGAGTGCACAGGCAGATTGCCACATGATGATGTAAAGTGGCAATATCGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556005.1
CDS-3UTR GCA 90 bp GTAGAGTCGAGTCTGCTGACATTACAATCTATTGATCTCCCCAGAGTTACCAAAGGGAGCCAGGAGCCCTaGAGCTCCAGGATCAGTCAT +
Preference number: 4 (lower is better)
Translates to: VESSLLTLQSIDLPRVTKGSQEP*SSRISH
Trigger: ATGACTGATCCTGGAGCTGCAGGGCTCCTGGCTCCC...TTTGGTAACTCTGGGGAGATCAATAGATTGTAATGTCAGCAGACTCGACTCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555872.5
CDS-3UTR CCA 90 bp AATGCTGAGTGTCCAGCATTGCTGTTCTTGCTCCAGTATAGCAGTTACTGGAGCGGAAACTGGCACCATTaGCAGGAAAAGTCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: NAECPALLFLLQYSSYWSGNWHH*QEKSAP
Trigger: AGGGGCAGACTTTTCCTGCCAATGGTGCCAGTTTCC...GCTCCAGTAACTGCTATACTGGAGCAAGAACAGCAATGCTGGACACTCAGCATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR CCA 90 bp AATGCTGAGTGTCCAGCATTGCTGTTCTTGCTCCAGTATAGCAGTTACTGGAGCGCACAGACAGTGCCCTaGGACCACTTTACAGTGATG +
Preference number: 4 (lower is better)
Translates to: NAECPALLFLLQYSSYWSAQTVP*DHFTVM
Trigger: CATCACTGTAAAGTGGTCCCAGGGCACTGTCTGTGC...GCTCCAGTAACTGCTATACTGGAGCAAGAACAGCAATGCTGGACACTCAGCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR CCA 90 bp CATGCAGAGAAAAATGCCAGCCAGAAATACCACAGGGTGTTGATGGCAGGCAAACGCTGGGTCAGGGCATaGACCTTATGCACATTCACA +
Preference number: 4 (lower is better)
Translates to: HAEKNASQKYHRVLMAGKRWVRA*TLCTFT
Trigger: TGTGAATGTGCATAAGGTCCATGCCCTGACCCAGCG...TTTGCCTGCCATCAACACCCTGTGGTATTTCTGGCTGGCATTTTTCTCTGCATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
CDS-3UTR CCA 90 bp GAGATGGACCAGGAAAATGATACTCCACAAGTTGGCTGCTGGCAGAAAGGAATTCAGGATCTTGGACGCTaGGTCAGGGCATGGACCTTA +
Preference number: 4 (lower is better)
Translates to: EMDQENDTPQVGCWQKGIQDLGR*VRAWTL
Trigger: TAAGGTCCATGCCCTGACCCAGCGTCCAAGATCCTG...AATTCCTTTCTGCCAGCAGCCAACTTGTGGAGTATCATTTTCCTGGTCCATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
CDS-3UTR CCA 90 bp GAAAAATGCCAGCCAGAAATACCACAGGGTGTTGATGGCAGGCAAAGTCAAGAACAGGATCTTGGACGCTaGGTCAGGGCATGGACCTTA +
Preference number: 4 (lower is better)
Translates to: EKCQPEIPQGVDGRQSQEQDLGR*VRAWTL
Trigger: TAAGGTCCATGCCCTGACCCAGCGTCCAAGATCCTG...TTCTTGACTTTGCCTGCCATCAACACCCTGTGGTATTTCTGGCTGGCATTTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
CDS-3UTR CCA 90 bp AGGTTTGCACTGGGTGACACAGTGGAGGTGCTGAGAGGTGGTCAGAGTCGAGATGCTGGACTTATTTATTaGGTGGAGAAGAGACCTGAA +
Preference number: 4 (lower is better)
Translates to: RFALGDTVEVLRGGQSRDAGLIY*VEKRPE
Trigger: TTCAGGTCTCTTCTCCACCCAATAAATAAGTCCAGC...ATCTCGACTCTGACCACCTCTCAGCACCTCCACTGTGTCACCCAGTGCAAACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556639.5
3UTR CAA 72 bp CACCCTGTTCTTCCTCTGTATATAGCCCGAGAGGGCTaGCTCATGTTAGCCCAAGCCGATTTCTTTGTCTTG +
Preference number: 4 (lower is better)
Translates to: HPVLPLYIAREG*LMLAQADFFVL
Trigger: CAAGACAAAGAAATCGGCTTGGGCTAACATGAGCAAGCCCTCTCGGGCTATATACAGAGGAAGAACAGGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR TCA 90 bp CTAAATGCTGAGTGTCCAGCATTGCTGTTCTTGCTCCAGTATAGCAGTTACTGGGTGAGGACAATGAAGTaGGTGAGTAGAGCACCGTGG +
Preference number: 4 (lower is better)
Translates to: LNAECPALLFLLQYSSYWVRTMK*VSRAPW
Trigger: CCACGGTGCTCTACTCACTCACTTCATTGTCCTCAC...CCAGTAACTGCTATACTGGAGCAAGAACAGCAATGCTGGACACTCAGCATTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR TCA 90 bp ATTCTTTCTTCTCTGGACCGACAAGAGTTTTCCCTTTGCAGGCCTCTTCCTGAGCATACCTATCATAGGTaGGATGAGAAGGCCCCTCCT +
Preference number: 4 (lower is better)
Translates to: ILSSLDRQEFSLCRPLPEHTYHR*DEKAPP
Trigger: AGGAGGGGCCTTCTCATCTCACCTATGATAGGTATG...CTCAGGAAGAGGCCTGCAAAGGGAAAACTCTTGTCGGTCCAGAGAAGAAAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556639.5
CDS-3UTR GCA 90 bp ACATCATTAGTAGAGTCGAGTCTGCTGACATTACAATCTATTGATCTCCCCAGAGGCCTGACTCAGGGCTaGTGGCCACACAGAAGGAGA +
Preference number: 4 (lower is better)
Translates to: TSLVESSLLTLQSIDLPRGLTQG*WPHRRR
Trigger: TCTCCTTCTGTGTGGCCAGCAGCCCTGAGTCAGGCC...TCTGGGGAGATCAATAGATTGTAATGTCAGCAGACTCGACTCTACTAATGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR GCA 90 bp AGTCTGCTGACATTACAATCTATTGATCTCCCCAGAGTTACCAAAAGTAGTTCACCAGGAGGCGGAAGTTaGAGTGAGCCGAGATCGCGC +
Preference number: 4 (lower is better)
Translates to: SLLTLQSIDLPRVTKSSSPGGGS*SEPRSR
Trigger: GCGCGATCTCGGCTCACTGCAACTTCCGCCTCCTGG...TGAACTACTTTTGGTAACTCTGGGGAGATCAATAGATTGTAATGTCAGCAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR GCA 90 bp AGTCAATTACTTATTGCATGCCTGTGCCAAAATATCTCCCGTAACCCATATATGCCAGGAGGCGGAAGTTaGAGTGAGCCGAGATCGCGC +
Preference number: 4 (lower is better)
Translates to: SQLLIACLCQNISRNPYMPGGGS*SEPRSR
Trigger: GCGCGATCTCGGCTCACTGCAACTTCCGCCTCCTGG...CATATATGGGTTACGGGAGATATTTTGGCACAGGCATGCAATAAGTAATTGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR GCA 90 bp AAAGTTGGGACCTCAAGAAGTCTACTTCTTCGGTCATGCCATTCACACAGAAGGCTTCCCAGAGCTTTTTaGCAACTGACAGGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: KVGTSRSLLLRSCHSHRRLPRAF*QLTGGG
Trigger: CCCACCACCTGTCAGTTGGCAAAAAGCTCTGGGAAG...CCTTCTGTGTGAATGGCATGACCGAAGAAGTAGACTTCTTGAGGTCCCAACTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
CDS-3UTR CCA 90 bp CATTGGCAGGAAAAGTCTGCCCCTCTGCAGATATTAGGAGATGATGAGATTCAGGGAAACTGGCACCATTaGCAGGAAAAGTCTGCCCCT +
Preference number: 4 (lower is better)
Translates to: HWQEKSAPLQILGDDEIQGNWHH*QEKSAP
Trigger: AGGGGCAGACTTTTCCTGCCAATGGTGCCAGTTTCC...CTGAATCTCATCATCTCCTAATATCTGCAGAGGGGCAGACTTTTCCTGCCAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR CCA 90 bp CTAAATGCTGAGTGTCCAGCATTGCTGTTCTTGCTCCAGTATAGCAGTTACTGGCAGTATAGCAGTTACTaGAGCCCAGCAGGACAGGCA +
Preference number: 4 (lower is better)
Translates to: LNAECPALLFLLQYSSYWQYSSY*SPAGQA
Trigger: TGCCTGTCCTGCTGGGCTCCAGTAACTGCTATACTG...CCAGTAACTGCTATACTGGAGCAAGAACAGCAATGCTGGACACTCAGCATTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR CCA 90 bp TATAGCCCGAGAGGGCTTGCTCATGTTAGCCCAAGCCGATTTCTTTGTCTTGCAAAAATTAGCCGGGTGTaGCGGTACACACCTGTAAAC +
Preference number: 4 (lower is better)
Translates to: YSPRGLAHVSPSRFLCLAKISRV*RYTPVN
Trigger: GTTTACAGGTGTGTACCGCCACACCCGGCTAATTTT...TGCAAGACAAAGAAATCGGCTTGGGCTAACATGAGCAAGCCCTCTCGGGCTATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR CCA 90 bp CATATCCATGCAGAGAAAAATGCCAGCCAGAAATACCACAGGGTGTTGATGGCATTAACCACGACCCTTTaGACAGGCAGCCCAGGTCTT +
Preference number: 4 (lower is better)
Translates to: HIHAEKNASQKYHRVLMALTTTL*TGSPGL
Trigger: AAGACCTGGGCTGCCTGTCCAAAGGGTCGTGGTTAA...TGCCATCAACACCCTGTGGTATTTCTGGCTGGCATTTTTCTCTGCATGGATATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556005.1
CDS-3UTR CCA 90 bp AGGTTTGCACTGGGTGACACAGTGGAGGTGCTGAGAGGTGGTCAGAGTCGAGATGATTTGTTGACAGCTTaGATGTGGAGGGTAAGAAAA +
Preference number: 4 (lower is better)
Translates to: RFALGDTVEVLRGGQSRDDLLTA*MWRVRK
Trigger: TTTTCTTACCCTCCACATCCAAGCTGTCAACAAATC...ATCTCGACTCTGACCACCTCTCAGCACCTCCACTGTGTCACCCAGTGCAAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556639.5
3UTR CAA 72 bp GTGGAGGTGCTGAGAGGTGGTCAGAGTCGAGATTTGTaGACAGCTTGGATGTGGAGGGTAAGAAAAAGAAAG +
Preference number: 4 (lower is better)
Translates to: VEVLRGGQSRDL*TAWMWRVRKRK
Trigger: CTTTCTTTTTCTTACCCTCCACATCCAAGCTGTCAACAAATCTCGACTCTGACCACCTCTCAGCACCTCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556639.5
3UTR CAA 72 bp CAGGATATATTGCTGGCACTCAGGTCTGTTGAGGGATaGGAAGACTTTGAAAGCATAGTGGCTCTGGCTCCA +
Preference number: 4 (lower is better)
Translates to: QDILLALRSVEG*EDFESIVALAP
Trigger: TGGAGCCAGAGCCACTATGCTTTCAAAGTCTTCCAATCCCTCAACAGACCTGAGTGCCAGCAATATATCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556639.5
CDS-3UTR TCA 90 bp GCTTCCCAAGGCCTGGCTGATTGCTTGGAACATAGTAAGTATTCTGTATGTGTAGTGAGGACAATGAAGTaGGTGAGTAGAGCACCGTGG +
Preference number: 4 (lower is better)
Translates to: ASQGLADCLEHSKYSVCVVRTMK*VSRAPW
Trigger: CCACGGTGCTCTACTCACTCACTTCATTGTCCTCAC...TACACATACAGAATACTTACTATGTTCCAAGCAATCAGCCAGGCCTTGGGAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR TCA 90 bp GTCTGTAGCATGACATCATTAGTAGAGTCGAGTCTGCTGACATTACAATCTATTGGAGCAGAGGGCAGCTaGGCAGCTCAAGGCTTGCTT +
Preference number: 4 (lower is better)
Translates to: VCSMTSLVESSLLTLQSIGAEGS*AAQGLL
Trigger: AAGCAAGCCTTGAGCTGCTCAGCTGCCCTCTGCTCC...AATAGATTGTAATGTCAGCAGACTCGACTCTACTAATGATGTCATGCTACAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR TCA 90 bp AGTCTGCTGACATTACAATCTATTGATCTCCCCAGAGTTACCAAAAGTAGTTCAGGAGCAGAGGGCAGCTaGGCAGCTCAAGGCTTGCTT +
Preference number: 4 (lower is better)
Translates to: SLLTLQSIDLPRVTKSSSGAEGS*AAQGLL
Trigger: AAGCAAGCCTTGAGCTGCTCAGCTGCCCTCTGCTCC...TGAACTACTTTTGGTAACTCTGGGGAGATCAATAGATTGTAATGTCAGCAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR TCA 90 bp AGTCAATTACTTATTGCATGCCTGTGCCAAAATATCTCCCGTAACCCATATATGTCTGGGTGCAGGACGTaGCTGCTAGAAACCAGGGGG +
Preference number: 4 (lower is better)
Translates to: SQLLIACLCQNISRNPYMSGCRT*LLETRG
Trigger: CCCCCTGGTTTCTAGCAGTCACGTCCTGCACCCAGA...CATATATGGGTTACGGGAGATATTTTGGCACAGGCATGCAATAAGTAATTGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR TCA 90 bp TCATTAGTAGAGTCGAGTCTGCTGACATTACAATCTATTGATCTCCCCAGAGTTGCTGGGATTACAGGCTaGGTCACTGTGTCCGGCCAA +
Preference number: 4 (lower is better)
Translates to: SLVESSLLTLQSIDLPRVAGITG*VTVSGQ
Trigger: TTGGCCGGACACAGTGACTCAGCCTGTAATCCCAGC...AACTCTGGGGAGATCAATAGATTGTAATGTCAGCAGACTCGACTCTACTAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR TCA 90 bp GAAAAATGCCAGCCAGAAATACCACAGGGTGTTGATGGCAGGCAAAGTCAAGAAGAGCTTTTTGCCAACTaGCAGGTGGTGGGAATGTAC +
Preference number: 4 (lower is better)
Translates to: EKCQPEIPQGVDGRQSQEELFAN*QVVGMY
Trigger: GTACATTCCCACCACCTGTCAGTTGGCAAAAAGCTC...TTCTTGACTTTGCCTGCCATCAACACCCTGTGGTATTTCTGGCTGGCATTTTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
CDS-3UTR TCA 90 bp CCATGCAGAGAAAAATGCCAGCCAGAAATACCACAGGGTGTTGATGGCAGGCAATCACATTTCATCTCATaGCTGGGAAGCAAAAGCAGC +
Preference number: 4 (lower is better)
Translates to: PCREKCQPEIPQGVDGRQSHFIS*LGSKSS
Trigger: GCTGCTTTTGCTTCCCAGTCATGAGATGAAATGTGA...TTGCCTGCCATCAACACCCTGTGGTATTTCTGGCTGGCATTTTTCTCTGCATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
CDS-3UTR TCA 90 bp CTGACAGGTGGTGGGAATGTACAAATAGCAGTGCTTACAATGAGATGGAGAAGGAAACGTCTCCAGTCATaGTGGGAGCATTTGGTGCCT +
Preference number: 4 (lower is better)
Translates to: LTGGGNVQIAVLTMRWRRKRLQS*WEHLVP
Trigger: AGGCACCAAATGCTCCCATCATGACTGGAGACGTTT...CCTTCTCCATCTCATTGTAAGCACTGCTATTTGTACATTCCCACCACCTGTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
CDS-3UTR TCA 90 bp GGTGGGAATGTACAAATAGCAGTGCTTACAATGAGATGGAGAAGGTTCCTAGGCAAACGTCTCCAGTCATaGTGGGAGCATTTGGTGCCT +
Preference number: 4 (lower is better)
Translates to: GGNVQIAVLTMRWRRFLGKRLQS*WEHLVP
Trigger: AGGCACCAAATGCTCCCATCATGACTGGAGACGTTT...GCCTAGGAACCTTCTCCATCTCATTGTAAGCACTGCTATTTGTACATTCCCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
CDS-3UTR TCA 90 bp CATGCAGAGAAAAATGCCAGCCAGAAATACCACAGGGTGTTGATGGCAGGCAAAGCTGACGTGACCATCTaGATCTCGATCTACTTCCAA +
Preference number: 4 (lower is better)
Translates to: HAEKNASQKYHRVLMAGKADVTI*ISIYFQ
Trigger: TTGGAAGTAGATCGAGATTCAGATGGTCACGTCAGC...TTTGCCTGCCATCAACACCCTGTGGTATTTCTGGCTGGCATTTTTCTCTGCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000557685.5
CDS-3UTR TCA 90 bp CAGACGTCAGTACTCCCCTGTGCCATAGATGTTCCACATGAACCTCCAGGAAATGAAAGGAACTTGGGATaGCTTCCAGGTTTGTTGCAA +
Preference number: 4 (lower is better)
Translates to: QTSVLPCAIDVPHEPPGNERNLG*LPGLLQ
Trigger: TTGCAACAAACCTGGAAGTCATCCCAAGTTCCTTTC...ATTTCCTGGAGGTTCATGTGGAACATCTATGGCACAGGGGAGTACTGACGTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556639.5
CDS-3UTR GCA 90 bp CATGCAGAGAAAAATGCCAGCCAGAAATACCACAGGGTGTTGATGGCAGGCAAACATCATGTGGCAATCTaGCTGTGCACTCAGGATCTT +
Preference number: 4 (lower is better)
Translates to: HAEKNASQKYHRVLMAGKHHVAI*LCTQDL
Trigger: AAGATCCTGAGTGCACAGGCAGATTGCCACATGATG...TTTGCCTGCCATCAACACCCTGTGGTATTTCTGGCTGGCATTTTTCTCTGCATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
CDS-3UTR GCA 90 bp CCATGCAGAGAAAAATGCCAGCCAGAAATACCACAGGGTGTTGATGGCAGGCAAACTCCACAAGTTGGCTaGTGGCAGAAAGGAATTATG +
Preference number: 4 (lower is better)
Translates to: PCREKCQPEIPQGVDGRQTPQVG*WQKGIM
Trigger: CATAATTCCTTTCTGCCAGCAGCCAACTTGTGGAGT...TTGCCTGCCATCAACACCCTGTGGTATTTCTGGCTGGCATTTTTCTCTGCATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
CDS-3UTR CCA 90 bp AGTCTGCTGACATTACAATCTATTGATCTCCCCAGAGTTACCAAAAGTAGTTCATCCGCGACCTGGCTCTaGCCTCGGAGAAGAACATCG +
Preference number: 4 (lower is better)
Translates to: SLLTLQSIDLPRVTKSSSSATWL*PRRRTS
Trigger: CGATGTTCTTCTCCGAGGCCAGAGCCAGGTCGCGGA...TGAACTACTTTTGGTAACTCTGGGGAGATCAATAGATTGTAATGTCAGCAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000316738.12
CDS-3UTR CCA 90 bp AGTCAATTACTTATTGCATGCCTGTGCCAAAATATCTCCCGTAACCCATATATGGTGAGTAGAGCACCGTaGCCTGCAGTGTGGAGAGGG +
Preference number: 4 (lower is better)
Translates to: SQLLIACLCQNISRNPYMVSRAP*PAVWRG
Trigger: CCCTCTCCACACTGCAGGCCACGGTGCTCTACTCAC...CATATATGGGTTACGGGAGATATTTTGGCACAGGCATGCAATAAGTAATTGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR CCA 90 bp GCTTCCCAAGGCCTGGCTGATTGCTTGGAACATAGTAAGTATTCTGTATGTGTAGCACAGACAGTGCCCTaGGACCACTTTACAGTGATG +
Preference number: 4 (lower is better)
Translates to: ASQGLADCLEHSKYSVCVAQTVP*DHFTVM
Trigger: CATCACTGTAAAGTGGTCCCAGGGCACTGTCTGTGC...TACACATACAGAATACTTACTATGTTCCAAGCAATCAGCCAGGCCTTGGGAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR CCA 90 bp ACATCATTAGTAGAGTCGAGTCTGCTGACATTACAATCTATTGATCTCCCCAGAAGAAACCAGGGGGTATaGAGCAGAGGGCAGCTGAGC +
Preference number: 4 (lower is better)
Translates to: TSLVESSLLTLQSIDLPRRNQGV*SRGQLS
Trigger: GCTCAGCTGCCCTCTGCTCCATACCCCCTGGTTTCT...TCTGGGGAGATCAATAGATTGTAATGTCAGCAGACTCGACTCTACTAATGATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR CCA 90 bp CCATGCAGAGAAAAATGCCAGCCAGAAATACCACAGGGTGTTGATGGCAGGCAAGTGCTTACAATGAGATaGAGAAGGTTCCTAGGCATG +
Preference number: 4 (lower is better)
Translates to: PCREKCQPEIPQGVDGRQVLTMR*RRFLGM
Trigger: CATGCCTAGGAACCTTCTCCATCTCATTGTAAGCAC...TTGCCTGCCATCAACACCCTGTGGTATTTCTGGCTGGCATTTTTCTCTGCATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
CDS-3UTR CCA 90 bp AGGTTTGCACTGGGTGACACAGTGGAGGTGCTGAGAGGTGGTCAGAGTCGAGATAAGCAACATAGTAAGTaGTTACATATTGGAGGTCAC +
Preference number: 4 (lower is better)
Translates to: RFALGDTVEVLRGGQSRDKQHSK*LHIGGH
Trigger: GTGACCTCCAATATGTAACCACTTACTATGTTGCTT...ATCTCGACTCTGACCACCTCTCAGCACCTCCACTGTGTCACCCAGTGCAAACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556639.5
CDS-3UTR TCA 90 bp GTCTGTAGCATGACATCATTAGTAGAGTCGAGTCTGCTGACATTACAATCTATTGCTGGGATTACAGGCTaGGTCACTGTGTCCGGCCAA +
Preference number: 4 (lower is better)
Translates to: VCSMTSLVESSLLTLQSIAGITG*VTVSGQ
Trigger: TTGGCCGGACACAGTGACTCAGCCTGTAATCCCAGC...AATAGATTGTAATGTCAGCAGACTCGACTCTACTAATGATGTCATGCTACAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR TCA 90 bp AGAGAAAAATGCCAGCCAGAAATACCACAGGGTGTTGATGGCAGGCAAAGTCAAAATACCACAGGGTGTTaGTGGCAGGCAAAGTCAAGA +
Preference number: 4 (lower is better)
Translates to: REKCQPEIPQGVDGRQSQNTTGC*WQAKSR
Trigger: TCTTGACTTTGCCTGCCATCAACACCCTGTGGTATT...TTGACTTTGCCTGCCATCAACACCCTGTGGTATTTCTGGCTGGCATTTTTCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538485.6
ENST00000556005.1
ENST00000557685.5
CDS-3UTR TCA 90 bp GGTGGGAATGTACAAATAGCAGTGCTTACAATGAGATGGAGAAGGTTCCTAGGCGATGGACCAGGAAAATaGTACTCCACAAGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: GGNVQIAVLTMRWRRFLGDGPGK*YSTSWL
Trigger: CAGCCAACTTGTGGAGTATCATTTTCCTGGTCCATC...GCCTAGGAACCTTCTCCATCTCATTGTAAGCACTGCTATTTGTACATTCCCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
CDS-3UTR TCA 90 bp AAAGTTGGGACCTCAAGAAGTCTACTTCTTCGGTCATGCCATTCACACAGAAGGGATGGACCAGGAAAATaGTACTCCACAAGTTGGCTG +
Preference number: 4 (lower is better)
Translates to: KVGTSRSLLLRSCHSHRRDGPGK*YSTSWL
Trigger: CAGCCAACTTGTGGAGTATCATTTTCCTGGTCCATC...CCTTCTGTGTGAATGGCATGACCGAAGAAGTAGACTTCTTGAGGTCCCAACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
CDS-3UTR GCA 90 bp CCTCTGTATATAGCCCGAGAGGGCTTGCTCATGTTAGCCCAAGCCGATTTCTTTCTTATTGCATGCCTGTaGCAAAATATCTCCCGTAAC +
Preference number: 4 (lower is better)
Translates to: PLYIAREGLLMLAQADFFLIACL*QNISRN
Trigger: GTTACGGGAGATATTTTGGCACAGGCATGCAATAAG...AAAGAAATCGGCTTGGGCTAACATGAGCAAGCCCTCTCGGGCTATATACAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR GCA 90 bp CCTCTGTATATAGCCCGAGAGGGCTTGCTCATGTTAGCCCAAGCCGATTTCTTTCAGCATTGCTGTTCTTaGTCCAGTATAGCAGTTACT +
Preference number: 4 (lower is better)
Translates to: PLYIAREGLLMLAQADFFQHCCS*SSIAVT
Trigger: AGTAACTGCTATACTGGAGCAAGAACAGCAATGCTG...AAAGAAATCGGCTTGGGCTAACATGAGCAAGCCCTCTCGGGCTATATACAGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR GCA 90 bp AATGCTGAGTGTCCAGCATTGCTGTTCTTGCTCCAGTATAGCAGTTACTGGAGCCTGAGTGTCCAGCATTaGTGTTCTTGCTCCAGTATA +
Preference number: 4 (lower is better)
Translates to: NAECPALLFLLQYSSYWSLSVQH*CSCSSI
Trigger: TATACTGGAGCAAGAACAGCAATGCTGGACACTCAG...GCTCCAGTAACTGCTATACTGGAGCAAGAACAGCAATGCTGGACACTCAGCATT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR GCA 90 bp AGAGAAAAATGCCAGCCAGAAATACCACAGGGTGTTGATGGCAGGCAAAGTCAACATCATGTGGCAATCTaGCTGTGCACTCAGGATCTT +
Preference number: 4 (lower is better)
Translates to: REKCQPEIPQGVDGRQSQHHVAI*LCTQDL
Trigger: AAGATCCTGAGTGCACAGGCAGATTGCCACATGATG...TTGACTTTGCCTGCCATCAACACCCTGTGGTATTTCTGGCTGGCATTTTTCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
CDS-3UTR GCA 90 bp ACATCATTAGTAGAGTCGAGTCTGCTGACATTACAATCTATTGATCTCCCCAGAAGCCCAGGTCTTATCTaGACACCCGGCAGAGTGAGA +
Preference number: 4 (lower is better)
Translates to: TSLVESSLLTLQSIDLPRSPGLI*TPGRVR
Trigger: TCTCACTCTGCCGGGTGTGCAGATAAGACCTGGGCT...TCTGGGGAGATCAATAGATTGTAATGTCAGCAGACTCGACTCTACTAATGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555872.5
CDS-3UTR GCA 90 bp CAGACGTCAGTACTCCCCTGTGCCATAGATGTTCCACATGAACCTCCAGGAAATGAGCTCACTGAAAATTaGTCTAAAATCTCTCCCTCC +
Preference number: 4 (lower is better)
Translates to: QTSVLPCAIDVPHEPPGNELTEN*SKISPS
Trigger: GGAGGGAGAGATTTTAGAGCAATTTTCAGTGAGCTC...ATTTCCTGGAGGTTCATGTGGAACATCTATGGCACAGGGGAGTACTGACGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000556639.5
CDS-3UTR CCA 90 bp CTGATGTACATTTTACAAGGATCATTGCTGGACTTATTTATTGGGTGGAGAAGATCCGCGACCTGGCTCTaGCCTCGGAGAAGAACATCG +
Preference number: 4 (lower is better)
Translates to: LMYILQGSLLDLFIGWRRSATWL*PRRRTS
Trigger: CGATGTTCTTCTCCGAGGCCAGAGCCAGGTCGCGGA...TCTTCTCCACCCAATAAATAAGTCCAGCAATGATCCTTGTAAAATGTACATCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556639.5
CDS-3UTR CCA 90 bp TATAGCCCGAGAGGGCTTGCTCATGTTAGCCCAAGCCGATTTCTTTGTCTTGCAAATCCACTTCTATCTTaGAGGGCTTGTACCCAAACA +
Preference number: 4 (lower is better)
Translates to: YSPRGLAHVSPSRFLCLANPLLS*RACTQT
Trigger: TGTTTGGGTACAAGCCCTCCAAGATAGAAGTGGATT...TGCAAGACAAAGAAATCGGCTTGGGCTAACATGAGCAAGCCCTCTCGGGCTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR CCA 90 bp GCAAAAGCAGCTTCCCAGAGCTTTTTGCCAACTGACAGGTGGTGGGAATGTACAAATCCACTTCTATCTTaGAGGGCTTGTACCCAAACA +
Preference number: 4 (lower is better)
Translates to: AKAASQSFLPTDRWWECTNPLLS*RACTQT
Trigger: TGTTTGGGTACAAGCCCTCCAAGATAGAAGTGGATT...TGTACATTCCCACCACCTGTCAGTTGGCAAAAAGCTCTGGGAAGCTGCTTTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
CDS-3UTR CCA 90 bp GCTTCCCAAGGCCTGGCTGATTGCTTGGAACATAGTAAGTATTCTGTATGTGTAGAACGTGAACACACATaGCTAAGTGTCTGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: ASQGLADCLEHSKYSVCVEREHT*LSVWVQ
Trigger: CTGCACCCAGACACTTAGCCATGTGTGTTCACGTTC...TACACATACAGAATACTTACTATGTTCCAAGCAATCAGCCAGGCCTTGGGAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR CCA 90 bp AGAGAAAAATGCCAGCCAGAAATACCACAGGGTGTTGATGGCAGGCAAAGTCAACATGATGGGAGCATTTaGTGCCTCGATATTGCCACT +
Preference number: 4 (lower is better)
Translates to: REKCQPEIPQGVDGRQSQHDGSI*CLDIAT
Trigger: AGTGGCAATATCGAGGCACCAAATGCTCCCATCATG...TTGACTTTGCCTGCCATCAACACCCTGTGGTATTTCTGGCTGGCATTTTTCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
3UTR CAA 72 bp GCTGAGAGGTGGTCAGAGTCGAGATTTGTTGACAGCTaGGATGTGGAGGGTAAGAAAAAGAAAGGAACTTGG +
Preference number: 4 (lower is better)
Translates to: AERWSESRFVDS*DVEGKKKKGTW
Trigger: CCAAGTTCCTTTCTTTTTCTTACCCTCCACATCCAAGCTGTCAACAAATCTCGACTCTGACCACCTCTCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556639.5
CDS-3UTR TCA 90 bp GATGGGAGCATTTGGTGCCTCGATATTGCCACTTTACATCATCATGTGGCAATCAGGTGTCAAAGGCTGTaGAGATGTGTCTTACTTCGT +
Preference number: 4 (lower is better)
Translates to: DGSIWCLDIATLHHHVAIRCQRL*RCVLLR
Trigger: ACGAAGTAAGACACATCTTCACAGCCTTTGACACCT...GATTGCCACATGATGATGTAAAGTGGCAATATCGAGGCACCAAATGCTCCCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
CDS-3UTR TCA 90 bp AAAGTTGGGACCTCAAGAAGTCTACTTCTTCGGTCATGCCATTCACACAGAAGGAGGTGTCAAAGGCTGTaGAGATGTGTCTTACTTCGT +
Preference number: 4 (lower is better)
Translates to: KVGTSRSLLLRSCHSHRRRCQRL*RCVLLR
Trigger: ACGAAGTAAGACACATCTTCACAGCCTTTGACACCT...CCTTCTGTGTGAATGGCATGACCGAAGAAGTAGACTTCTTGAGGTCCCAACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
CDS-3UTR TCA 90 bp CCTCTGTATATAGCCCGAGAGGGCTTGCTCATGTTAGCCCAAGCCGATTTCTTTGACATTACAATCTATTaGTCTCCCCAGAGTTACCAA +
Preference number: 4 (lower is better)
Translates to: PLYIAREGLLMLAQADFFDITIY*SPQSYQ
Trigger: TTGGTAACTCTGGGGAGATCAATAGATTGTAATGTC...AAAGAAATCGGCTTGGGCTAACATGAGCAAGCCCTCTCGGGCTATATACAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR TCA 90 bp GCAAAAGCAGCTTCCCAGAGCTTTTTGCCAACTGACAGGTGGTGGGAATGTACAATTCTGAGGTCAGCTTaGAAAGCTTACACACATTCA +
Preference number: 4 (lower is better)
Translates to: AKAASQSFLPTDRWWECTILRSA*KAYTHS
Trigger: TGAATGTGTGTAAGCTTTTCAAGCTGACCTCAGAAT...TGTACATTCCCACCACCTGTCAGTTGGCAAAAAGCTCTGGGAAGCTGCTTTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
CDS-3UTR TCA 90 bp GATGACTTCCAGGTTTGTTGCAAACAACGTGAAATACACAAATCATCAGGTAATGAGGTTTGCACTGGGTaGCACAGTGGAGGTGCTGAG +
Preference number: 4 (lower is better)
Translates to: DDFQVCCKQREIHKSSGNEVCTG*HSGGAE
Trigger: CTCAGCACCTCCACTGTGTCACCCAGTGCAAACCTC...ATTACCTGATGATTTGTGTATTTCACGTTGTTTGCAACAAACCTGGAAGTCATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556639.5
CDS-3UTR GCA 90 bp ACATCATTAGTAGAGTCGAGTCTGCTGACATTACAATCTATTGATCTCCCCAGAGAGCAGCTCAAGGCTTaGTTCTCCACAGTGAGACTC +
Preference number: 4 (lower is better)
Translates to: TSLVESSLLTLQSIDLPREQLKA*FSTVRL
Trigger: GAGTCTCACTGTGGAGAAGCAAGCCTTGAGCTGCTC...TCTGGGGAGATCAATAGATTGTAATGTCAGCAGACTCGACTCTACTAATGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR GCA 90 bp CATTGGCAGGAAAAGTCTGCCCCTCTGCAGATATTAGGAGATGATGAGATTCAGCTGAGTGTCCAGCATTaGTGTTCTTGCTCCAGTATA +
Preference number: 4 (lower is better)
Translates to: HWQEKSAPLQILGDDEIQLSVQH*CSCSSI
Trigger: TATACTGGAGCAAGAACAGCAATGCTGGACACTCAG...CTGAATCTCATCATCTCCTAATATCTGCAGAGGGGCAGACTTTTCCTGCCAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR GCA 90 bp CCATGCAGAGAAAAATGCCAGCCAGAAATACCACAGGGTGTTGATGGCAGGCAAGCCGAAGTTAAATCATaGACTGAAAATGCCTCTGAA +
Preference number: 4 (lower is better)
Translates to: PCREKCQPEIPQGVDGRQAEVKS*TENASE
Trigger: TTCAGAGGCATTTTCAGTGCATGATTTAACTTCGGC...TTGCCTGCCATCAACACCCTGTGGTATTTCTGGCTGGCATTTTTCTCTGCATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000538485.6
ENST00000556005.1
ENST00000557685.5
CDS-3UTR GCA 90 bp TCGATATTGCCACTTTACATCATCATGTGGCAATCTGCCTGTGCACTCAGGATCACTCCCTTTTACAATTaGATTCCTAAGACCCAGCCC +
Preference number: 4 (lower is better)
Translates to: SILPLYIIMWQSACALRITPFYN*IPKTQP
Trigger: GGGCTGGGTCTTAGGAATGCAATTGTAAAAGGGAGT...GATCCTGAGTGCACAGGCAGATTGCCACATGATGATGTAAAGTGGCAATATCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
CDS-3UTR GCA 90 bp GATGGGAGCATTTGGTGCCTCGATATTGCCACTTTACATCATCATGTGGCAATCACTCCCTTTTACAATTaGATTCCTAAGACCCAGCCC +
Preference number: 4 (lower is better)
Translates to: DGSIWCLDIATLHHHVAITPFYN*IPKTQP
Trigger: GGGCTGGGTCTTAGGAATGCAATTGTAAAAGGGAGT...GATTGCCACATGATGATGTAAAGTGGCAATATCGAGGCACCAAATGCTCCCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
CDS-3UTR GCA 90 bp TGCCAGCCAGAAATACCACAGGGTGTTGATGGCAGGCAAAGTCAAGAAAGAACTCTACTTCTTCGGTCATaGCATTCACACAGAAGGTAT +
Preference number: 4 (lower is better)
Translates to: CQPEIPQGVDGRQSQERTLLLRS*HSHRRY
Trigger: ATACCTTCTGTGTGAATGGCATGACCGAAGAAGTAG...AGTTCTTTCTTGACTTTGCCTGCCATCAACACCCTGTGGTATTTCTGGCTGGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
CDS-3UTR GCA 90 bp TATCCATGCAGAGAAAAATGCCAGCCAGAAATACCACAGGGTGTTGATGGCAGGCTACTTCTTCGGTCATaGCATTCACACAGAAGGTAT +
Preference number: 4 (lower is better)
Translates to: YPCREKCQPEIPQGVDGRLLLRS*HSHRRY
Trigger: ATACCTTCTGTGTGAATGGCATGACCGAAGAAGTAG...CCTGCCATCAACACCCTGTGGTATTTCTGGCTGGCATTTTTCTCTGCATGGATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
CDS-3UTR CCA 90 bp CCCTGTTCTTCCTCTGTATATAGCCCGAGAGGGCTTGCTCATGTTAGCCCAAGCTTTACAGTGATGATTTaGACTCAGGGACATTATCTT +
Preference number: 4 (lower is better)
Translates to: PCSSSVYSPRGLAHVSPSFTVMI*TQGHYL
Trigger: AAGATAATGTCCCTGAGTCCAAATCATCACTGTAAA...GCTTGGGCTAACATGAGCAAGCCCTCTCGGGCTATATACAGAGGAAGAACAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR CCA 90 bp TACTTCTTCGGTCATGCCATTCACACAGAAGGTATAGCTGATGACTGTTATCTACGCTGGGTCAGGGCATaGACCTTATGCACATTCACA +
Preference number: 4 (lower is better)
Translates to: YFFGHAIHTEGIADDCYLRWVRA*TLCTFT
Trigger: TGTGAATGTGCATAAGGTCCATGCCCTGACCCAGCG...TAGATAACAGTCATCAGCTATACCTTCTGTGTGAATGGCATGACCGAAGAAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
CDS-3UTR CCA 90 bp GGTGGGAATGTACAAATAGCAGTGCTTACAATGAGATGGAGAAGGTTCCTAGGCCTTTACATCATCATGTaGCAATCTGCCTGTGCACTC +
Preference number: 4 (lower is better)
Translates to: GGNVQIAVLTMRWRRFLGLYIIM*QSACAL
Trigger: GAGTGCACAGGCAGATTGCCACATGATGATGTAAAG...GCCTAGGAACCTTCTCCATCTCATTGTAAGCACTGCTATTTGTACATTCCCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
CDS-3UTR CCA 90 bp AGAGAAAAATGCCAGCCAGAAATACCACAGGGTGTTGATGGCAGGCAAAGTCAACTTTACATCATCATGTaGCAATCTGCCTGTGCACTC +
Preference number: 4 (lower is better)
Translates to: REKCQPEIPQGVDGRQSQLYIIM*QSACAL
Trigger: GAGTGCACAGGCAGATTGCCACATGATGATGTAAAG...TTGACTTTGCCTGCCATCAACACCCTGTGGTATTTCTGGCTGGCATTTTTCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
CDS-3UTR CCA 90 bp GGTGTTGATGGCAGGCAAAGTCAAGAAAGAACTTTAAGTCAGCTTCCTGATGACCATGATGGGAGCATTTaGTGCCTCGATATTGCCACT +
Preference number: 4 (lower is better)
Translates to: GVDGRQSQERTLSQLPDDHDGSI*CLDIAT
Trigger: AGTGGCAATATCGAGGCACCAAATGCTCCCATCATG...GTCATCAGGAAGCTGACTTAAAGTTCTTTCTTGACTTTGCCTGCCATCAACACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
CDS-3UTR TCA 90 bp GTAGAGTCGAGTCTGCTGACATTACAATCTATTGATCTCCCCAGAGTTACCAAACTCGATCTACTTCCCTaGATACCTCAAGAACAGTCC +
Preference number: 4 (lower is better)
Translates to: VESSLLTLQSIDLPRVTKLDLLP*IPQEQS
Trigger: GGACTGTTCTTGAGGTATTCAGGGAAGTAGATCGAG...TTTGGTAACTCTGGGGAGATCAATAGATTGTAATGTCAGCAGACTCGACTCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316738.12
ENST00000555872.5
ENST00000556609.5
CDS-3UTR TCA 90 bp TCATTAGTAGAGTCGAGTCTGCTGACATTACAATCTATTGATCTCCCCAGAGTTGCTGACGTGACCATCTaGATCTCGATCTACTTCCCT +
Preference number: 4 (lower is better)
Translates to: SLVESSLLTLQSIDLPRVADVTI*ISIYFP
Trigger: AGGGAAGTAGATCGAGATTCAGATGGTCACGTCAGC...AACTCTGGGGAGATCAATAGATTGTAATGTCAGCAGACTCGACTCTACTAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316738.12
ENST00000555872.5
ENST00000556609.5
CDS-3UTR TCA 90 bp GGTGTTGATGGCAGGCAAAGTCAAGAAAGAACTTTAAGTCAGCTTCCTGATGACTCTCTAAAGCTGACGTaGCCATCTGAATCTCGATCT +
Preference number: 4 (lower is better)
Translates to: GVDGRQSQERTLSQLPDDSLKLT*PSESRS
Trigger: AGATCGAGATTCAGATGGTCACGTCAGCTTTAGAGA...GTCATCAGGAAGCTGACTTAAAGTTCTTTCTTGACTTTGCCTGCCATCAACACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000557685.5
CDS-3UTR TCA 90 bp CATTGGCAGGAAAAGTCTGCCCCTCTGCAGATATTAGGAGATGATGAGATTCAGCCATCTCTAGGATTCTaGGATGCAAGTCTATCATCA +
Preference number: 4 (lower is better)
Translates to: HWQEKSAPLQILGDDEIQPSLGF*DASLSS
Trigger: TGATGATAGACTTGCATCTCAGAATCCTAGAGATGG...CTGAATCTCATCATCTCCTAATATCTGCAGAGGGGCAGACTTTTCCTGCCAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR TCA 90 bp GCTTCCCAAGGCCTGGCTGATTGCTTGGAACATAGTAAGTATTCTGTATGTGTACCAATGTTGAGCAAATaGAGGAAACTGGCACCATTG +
Preference number: 4 (lower is better)
Translates to: ASQGLADCLEHSKYSVCVPMLSK*RKLAPL
Trigger: CAATGGTGCCAGTTTCCTTCATTTGCTCAACATTGG...TACACATACAGAATACTTACTATGTTCCAAGCAATCAGCCAGGCCTTGGGAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR TCA 90 bp TGTAGCATGACATCATTAGTAGAGTCGAGTCTGCTGACATTACAATCTATTGATGCAATCATGGCTCACTaGAGCTTCAAACCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: CSMTSLVESSLLTLQSIDAIMAH*SFKPLG
Trigger: GCCCAGGGGTTTGAAGCTTCAGTGAGCCATGATTGC...ATCAATAGATTGTAATGTCAGCAGACTCGACTCTACTAATGATGTCATGCTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR TCA 90 bp GAAAAATGCCAGCCAGAAATACCACAGGGTGTTGATGGCAGGCAAAGTCAAGAATCAGAGAGGAAATTCTaGGGTCAGCTTGAAAAGCTT +
Preference number: 4 (lower is better)
Translates to: EKCQPEIPQGVDGRQSQESERKF*GQLEKL
Trigger: AAGCTTTTCAAGCTGACCTCAGAATTTCCTCTCTGA...TTCTTGACTTTGCCTGCCATCAACACCCTGTGGTATTTCTGGCTGGCATTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
CDS-3UTR GCA 90 bp AGTCTGCTGACATTACAATCTATTGATCTCCCCAGAGTTACCAAAAGTAGTTCATCATCCAGGCTGGAGTaGGACAGTGCAATCATGGCT +
Preference number: 4 (lower is better)
Translates to: SLLTLQSIDLPRVTKSSSSSRLE*DSAIMA
Trigger: AGCCATGATTGCACTGTCGCACTCCAGCCTGGATGA...TGAACTACTTTTGGTAACTCTGGGGAGATCAATAGATTGTAATGTCAGCAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR GCA 90 bp GTCTGTAGCATGACATCATTAGTAGAGTCGAGTCTGCTGACATTACAATCTATTGTCTTGCACAGACAGTaGCCTGGGACCACTTTACAG +
Preference number: 4 (lower is better)
Translates to: VCSMTSLVESSLLTLQSIVLHRQ*PGTTLQ
Trigger: CTGTAAAGTGGTCCCAGGGCACTGTCTGTGCAAGAC...AATAGATTGTAATGTCAGCAGACTCGACTCTACTAATGATGTCATGCTACAGAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR GCA 90 bp CTGCTGACATTACAATCTATTGATCTCCCCAGAGTTACCAAAAGTAGTTCACAAGAGCAGCTCAAGGCTTaGTTCTCCACAGTGAGACTC +
Preference number: 4 (lower is better)
Translates to: LLTLQSIDLPRVTKSSSQEQLKA*FSTVRL
Trigger: GAGTCTCACTGTGGAGAAGCAAGCCTTGAGCTGCTC...TTGTGAACTACTTTTGGTAACTCTGGGGAGATCAATAGATTGTAATGTCAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR GCA 90 bp CATGCAGAGAAAAATGCCAGCCAGAAATACCACAGGGTGTTGATGGCAGGCAAATTGGTGCCTCGATATTaGCACTTTACATCATCATGT +
Preference number: 4 (lower is better)
Translates to: HAEKNASQKYHRVLMAGKLVPRY*HFTSSC
Trigger: ACATGATGATGTAAAGTGGCAATATCGAGGCACCAA...TTTGCCTGCCATCAACACCCTGTGGTATTTCTGGCTGGCATTTTTCTCTGCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
CDS-3UTR GCA 90 bp CAGACGTCAGTACTCCCCTGTGCCATAGATGTTCCACATGAACCTCCAGGAAATAACAACCTCAATCAATaGCAGGTTTTGATGCTTACA +
Preference number: 4 (lower is better)
Translates to: QTSVLPCAIDVPHEPPGNNNLNQ*QVLMLT
Trigger: TGTAAGCATCAAAACCTGGCATTGATTGAGGTTGTT...ATTTCCTGGAGGTTCATGTGGAACATCTATGGCACAGGGGAGTACTGACGTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556639.5
CDS-3UTR CCA 90 bp CTAAATGCTGAGTGTCCAGCATTGCTGTTCTTGCTCCAGTATAGCAGTTACTGGGCCTGGCTGATTGCTTaGAACATAGTAAGTATTCTG +
Preference number: 4 (lower is better)
Translates to: LNAECPALLFLLQYSSYWAWLIA*NIVSIL
Trigger: CAGAATACTTACTATGTTCCAAGCAATCAGCCAGGC...CCAGTAACTGCTATACTGGAGCAAGAACAGCAATGCTGGACACTCAGCATTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR CCA 90 bp GTAGAGTCGAGTCTGCTGACATTACAATCTATTGATCTCCCCAGAGTTACCAAAATGCTTCCCAAGGCCTaGCTGATTGCTTGGAACATA +
Preference number: 4 (lower is better)
Translates to: VESSLLTLQSIDLPRVTKMLPKA*LIAWNI
Trigger: TATGTTCCAAGCAATCAGCCAGGCCTTGGGAAGCAT...TTTGGTAACTCTGGGGAGATCAATAGATTGTAATGTCAGCAGACTCGACTCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR CCA 90 bp GTAGAGTCGAGTCTGCTGACATTACAATCTATTGATCTCCCCAGAGTTACCAAAGCGACAGTGCAATCATaGCTCACTGAAGCTTCAAAC +
Preference number: 4 (lower is better)
Translates to: VESSLLTLQSIDLPRVTKATVQS*LTEASN
Trigger: GTTTGAAGCTTCAGTGAGCCATGATTGCACTGTCGC...TTTGGTAACTCTGGGGAGATCAATAGATTGTAATGTCAGCAGACTCGACTCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR CCA 90 bp AGTCTGCTGACATTACAATCTATTGATCTCCCCAGAGTTACCAAAAGTAGTTCACAGTATAGCAGTTACTaGAGCCCAGCAGGACAGGCA +
Preference number: 4 (lower is better)
Translates to: SLLTLQSIDLPRVTKSSSQYSSY*SPAGQA
Trigger: TGCCTGTCCTGCTGGGCTCCAGTAACTGCTATACTG...TGAACTACTTTTGGTAACTCTGGGGAGATCAATAGATTGTAATGTCAGCAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR CCA 90 bp AGTCAATTACTTATTGCATGCCTGTGCCAAAATATCTCCCGTAACCCATATATGTTAACCACGACCCTTTaGACAGGCAGCCCAGGTCTT +
Preference number: 4 (lower is better)
Translates to: SQLLIACLCQNISRNPYMLTTTL*TGSPGL
Trigger: AAGACCTGGGCTGCCTGTCCAAAGGGTCGTGGTTAA...CATATATGGGTTACGGGAGATATTTTGGCACAGGCATGCAATAAGTAATTGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555872.5
CDS-3UTR CCA 90 bp CTGATGTACATTTTACAAGGATCATTGCTGGACTTATTTATTGGGTGGAGAAGAAGGCTGAGATGGTGGTaGAGGTTTGCACTGGGTGAC +
Preference number: 4 (lower is better)
Translates to: LMYILQGSLLDLFIGWRRRLRWW*RFALGD
Trigger: GTCACCCAGTGCAAACCTCCACCACCATCTCAGCCT...TCTTCTCCACCCAATAAATAAGTCCAGCAATGATCCTTGTAAAATGTACATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556639.5
3UTR CAA 72 bp TTGGAATTACCTTCACTAAATGCTGAGTGTCCAGCATaGCTGTTCTTGCTCCAGTATAGCAGTTACTGGAGC +
Preference number: 4 (lower is better)
Translates to: LELPSLNAECPA*LFLLQYSSYWS
Trigger: GCTCCAGTAACTGCTATACTGGAGCAAGAACAGCAATGCTGGACACTCAGCATTTAGTGAAGGTAATTCCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
3UTR CAA 72 bp AGAAGGCCCCTCCTGATGTACATTTTACAAGGATCATaGCTGGACTTATTTATTGGGTGGAGAAGAGACCTG +
Preference number: 4 (lower is better)
Translates to: RRPLLMYILQGS*LDLFIGWRRDL
Trigger: CAGGTCTCTTCTCCACCCAATAAATAAGTCCAGCAATGATCCTTGTAAAATGTACATCAGGAGGGGCCTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556639.5
CDS-3UTR TCA 90 bp ACATCATTAGTAGAGTCGAGTCTGCTGACATTACAATCTATTGATCTCCCCAGACTCGATCTACTTCCCTaGATACCTCAAGAACAGTCC +
Preference number: 4 (lower is better)
Translates to: TSLVESSLLTLQSIDLPRLDLLP*IPQEQS
Trigger: GGACTGTTCTTGAGGTATTCAGGGAAGTAGATCGAG...TCTGGGGAGATCAATAGATTGTAATGTCAGCAGACTCGACTCTACTAATGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000316738.12
ENST00000555872.5
ENST00000556609.5
CDS-3UTR TCA 90 bp CTGCTGACATTACAATCTATTGATCTCCCCAGAGTTACCAAAAGTAGTTCACAAGCTGACGTGACCATCTaGATCTCGATCTACTTCCCT +
Preference number: 4 (lower is better)
Translates to: LLTLQSIDLPRVTKSSSQADVTI*ISIYFP
Trigger: AGGGAAGTAGATCGAGATTCAGATGGTCACGTCAGC...TTGTGAACTACTTTTGGTAACTCTGGGGAGATCAATAGATTGTAATGTCAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000316738.12
ENST00000555872.5
ENST00000556609.5
CDS-3UTR TCA 90 bp GTAGAGTCGAGTCTGCTGACATTACAATCTATTGATCTCCCCAGAGTTACCAAAACCTTCACTAAATGCTaGGTGTCCAGCATTGCTGTT +
Preference number: 4 (lower is better)
Translates to: VESSLLTLQSIDLPRVTKTFTKC*VSSIAV
Trigger: AACAGCAATGCTGGACACTCAGCATTTAGTGAAGGT...TTTGGTAACTCTGGGGAGATCAATAGATTGTAATGTCAGCAGACTCGACTCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR TCA 90 bp TACTTCTTCGGTCATGCCATTCACACAGAAGGTATAGCTGATGACTGTTATCTAAATACCACAGGGTGTTaGTGGCAGGCAAAGTCAAGA +
Preference number: 4 (lower is better)
Translates to: YFFGHAIHTEGIADDCYLNTTGC*WQAKSR
Trigger: TCTTGACTTTGCCTGCCATCAACACCCTGTGGTATT...TAGATAACAGTCATCAGCTATACCTTCTGTGTGAATGGCATGACCGAAGAAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
CDS-3UTR TCA 90 bp CTGACAGGTGGTGGGAATGTACAAATAGCAGTGCTTACAATGAGATGGAGAAGGATTCTGAGGTCAGCTTaGAAAGCTTACACACATTCA +
Preference number: 4 (lower is better)
Translates to: LTGGGNVQIAVLTMRWRRILRSA*KAYTHS
Trigger: TGAATGTGTGTAAGCTTTTCAAGCTGACCTCAGAAT...CCTTCTCCATCTCATTGTAAGCACTGCTATTTGTACATTCCCACCACCTGTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
CDS-3UTR TCA 90 bp TTGGGACCTCAAGAAGTCTACTTCTTCGGTCATGCCATTCACACAGAAGGTATATCAGAGAGGAAATTCTaGGGTCAGCTTGAAAAGCTT +
Preference number: 4 (lower is better)
Translates to: LGPQEVYFFGHAIHTEGISERKF*GQLEKL
Trigger: AAGCTTTTCAAGCTGACCTCAGAATTTCCTCTCTGA...TATACCTTCTGTGTGAATGGCATGACCGAAGAAGTAGACTTCTTGAGGTCCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
CDS-3UTR TCA 90 bp CTGATGTACATTTTACAAGGATCATTGCTGGACTTATTTATTGGGTGGAGAAGAGAGAATCTGCACAGGTaGGGGGTGTGCCTGAATGAT +
Preference number: 4 (lower is better)
Translates to: LMYILQGSLLDLFIGWRRENLHR*GVCLND
Trigger: ATCATTCAGGCACACCCCTCACCTGTGCAGATTCTC...TCTTCTCCACCCAATAAATAAGTCCAGCAATGATCCTTGTAAAATGTACATCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556639.5
CDS-3UTR TCA 90 bp ATTCTTTCTTCTCTGGACCGACAAGAGTTTTCCCTTTGCAGGCCTCTTCCTGAGTTGTTGCAAACAACGTaGAATACACAAATCATCAGG +
Preference number: 4 (lower is better)
Translates to: ILSSLDRQEFSLCRPLPELLQTT*NTQIIR
Trigger: CCTGATGATTTGTGTATTTCACGTTGTTTGCAACAA...CTCAGGAAGAGGCCTGCAAAGGGAAAACTCTTGTCGGTCCAGAGAAGAAAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556639.5
CDS-3UTR GCA 90 bp GCTTCCCAAGGCCTGGCTGATTGCTTGGAACATAGTAAGTATTCTGTATGTGTACTTATTGCATGCCTGTaGCAAAATATCTCCCGTAAC +
Preference number: 4 (lower is better)
Translates to: ASQGLADCLEHSKYSVCVLIACL*QNISRN
Trigger: GTTACGGGAGATATTTTGGCACAGGCATGCAATAAG...TACACATACAGAATACTTACTATGTTCCAAGCAATCAGCCAGGCCTTGGGAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR GCA 90 bp AGTCTGCTGACATTACAATCTATTGATCTCCCCAGAGTTACCAAAAGTAGTTCATGCAAACATGTCTCTTaGCCCCAGTACCCTCATCAC +
Preference number: 4 (lower is better)
Translates to: SLLTLQSIDLPRVTKSSSCKHVS*PQYPHH
Trigger: GTGATGAGGGTACTGGGGGCAAGAGACATGTTTGCA...TGAACTACTTTTGGTAACTCTGGGGAGATCAATAGATTGTAATGTCAGCAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR GCA 90 bp TCACAAGTCTGTAGCATGACATCATTAGTAGAGTCGAGTCTGCTGACATTACAACATCCTAAAGGGTTCTaGAAACATGTCTCTTGCCCC +
Preference number: 4 (lower is better)
Translates to: SQVCSMTSLVESSLLTLQHPKGF*KHVSCP
Trigger: GGGGCAAGAGACATGTTTGCAGAACCCTTTAGGATG...TTGTAATGTCAGCAGACTCGACTCTACTAATGATGTCATGCTACAGACTTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR GCA 90 bp AAAGTTGGGACCTCAAGAAGTCTACTTCTTCGGTCATGCCATTCACACAGAAGGGCCGAAGTTAAATCATaGACTGAAAATGCCTCTGAA +
Preference number: 4 (lower is better)
Translates to: KVGTSRSLLLRSCHSHRRAEVKS*TENASE
Trigger: TTCAGAGGCATTTTCAGTGCATGATTTAACTTCGGC...CCTTCTGTGTGAATGGCATGACCGAAGAAGTAGACTTCTTGAGGTCCCAACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
CDS-3UTR GCA 90 bp TGTTTTTATGGATGTTTCTATACCTGGAAGCAGGCAGATACTCAAAGACCAATACTTCCCAGAGCTTTTTaGCAACTGACAGGTGGTGGG +
Preference number: 4 (lower is better)
Translates to: CFYGCFYTWKQADTQRPILPRAF*QLTGGG
Trigger: CCCACCACCTGTCAGTTGGCAAAAAGCTCTGGGAAG...TATTGGTCTTTGAGTATCTGCCTGCTTCCAGGTATAGAAACATCCATAAAAACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
CDS-3UTR GCA 90 bp TTGGGACCTCAAGAAGTCTACTTCTTCGGTCATGCCATTCACACAGAAGGTATAAGGGCATGGACCTTATaGACATTCACATTTCATCTC +
Preference number: 4 (lower is better)
Translates to: LGPQEVYFFGHAIHTEGIRAWTL*TFTFHL
Trigger: GAGATGAAATGTGAATGTGCATAAGGTCCATGCCCT...TATACCTTCTGTGTGAATGGCATGACCGAAGAAGTAGACTTCTTGAGGTCCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
CDS-3UTR GCA 90 bp CCTCAAGAAGTCTACTTCTTCGGTCATGCCATTCACACAGAAGGTATAGCTGATAGGGCATGGACCTTATaGACATTCACATTTCATCTC +
Preference number: 4 (lower is better)
Translates to: PQEVYFFGHAIHTEGIADRAWTL*TFTFHL
Trigger: GAGATGAAATGTGAATGTGCATAAGGTCCATGCCCT...ATCAGCTATACCTTCTGTGTGAATGGCATGACCGAAGAAGTAGACTTCTTGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
CDS-3UTR GCA 90 bp TTCTTACACCAAAAATATCAGGATATAACTTTAAACGTCTCCAGTCATGATGGGGTGGCAATCTGCCTGTaGACTCAGGATCTTGGACGC +
Preference number: 4 (lower is better)
Translates to: FLHQKYQDITLNVSSHDGVAICL*TQDLGR
Trigger: GCGTCCAAGATCCTGAGTGCACAGGCAGATTGCCAC...CCCATCATGACTGGAGACGTTTAAAGTTATATCCTGATATTTTTGGTGTAAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
CDS-3UTR GCA 90 bp AGAGAGTTTAAGAAGCACTGCCTTATAGGATGTAATATAAAACGAGCCTTTCCTGTACATCTGAGAATCTaGACAGGTGAGGGGTGTGCC +
Preference number: 4 (lower is better)
Translates to: REFKKHCLIGCNIKRAFPVHLRI*TGEGCA
Trigger: GGCACACCCCTCACCTGTGCAGATTCTCAGATGTAC...AGGAAAGGCTCGTTTTATATTACATCCTATAAGGCAGTGCTTCTTAAACTCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556639.5
CDS-3UTR CCA 90 bp TTGGGACCTCAAGAAGTCTACTTCTTCGGTCATGCCATTCACACAGAAGGTATAAATCCACTTCTATCTTaGAGGGCTTGTACCCAAACA +
Preference number: 4 (lower is better)
Translates to: LGPQEVYFFGHAIHTEGINPLLS*RACTQT
Trigger: TGTTTGGGTACAAGCCCTCCAAGATAGAAGTGGATT...TATACCTTCTGTGTGAATGGCATGACCGAAGAAGTAGACTTCTTGAGGTCCCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
CDS-3UTR TCA 90 bp GTCTGTAGCATGACATCATTAGTAGAGTCGAGTCTGCTGACATTACAATCTATTCTCGATCTACTTCCCTaGATACCTCAAGAACAGTCC +
Preference number: 4 (lower is better)
Translates to: VCSMTSLVESSLLTLQSILDLLP*IPQEQS
Trigger: GGACTGTTCTTGAGGTATTCAGGGAAGTAGATCGAG...AATAGATTGTAATGTCAGCAGACTCGACTCTACTAATGATGTCATGCTACAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000316738.12
ENST00000555872.5
ENST00000556609.5
CDS-3UTR TCA 90 bp TCACAAGTCTGTAGCATGACATCATTAGTAGAGTCGAGTCTGCTGACATTACAATCTCTAAAGCTGACGTaGCCATCTGAATCTCGATCT +
Preference number: 4 (lower is better)
Translates to: SQVCSMTSLVESSLLTLQSLKLT*PSESRS
Trigger: AGATCGAGATTCAGATGGTCACGTCAGCTTTAGAGA...TTGTAATGTCAGCAGACTCGACTCTACTAATGATGTCATGCTACAGACTTGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316738.12
ENST00000555872.5
ENST00000556609.5
ENST00000557685.5
CDS-3UTR TCA 90 bp ACATCATTAGTAGAGTCGAGTCTGCTGACATTACAATCTATTGATCTCCCCAGACCAATGTTGAGCAAATaGAGGAAACTGGCACCATTG +
Preference number: 4 (lower is better)
Translates to: TSLVESSLLTLQSIDLPRPMLSK*RKLAPL
Trigger: CAATGGTGCCAGTTTCCTTCATTTGCTCAACATTGG...TCTGGGGAGATCAATAGATTGTAATGTCAGCAGACTCGACTCTACTAATGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR TCA 90 bp CATTGGCAGGAAAAGTCTGCCCCTCTGCAGATATTAGGAGATGATGAGATTCAGATCCAGGATACCAAATaGCATTTAGTTGTCACATCT +
Preference number: 4 (lower is better)
Translates to: HWQEKSAPLQILGDDEIQIQDTK*HLVVTS
Trigger: AGATGTGACAACTAAATGTCATTTGGTATCCTGGAT...CTGAATCTCATCATCTCCTAATATCTGCAGAGGGGCAGACTTTTCCTGCCAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR TCA 90 bp CTGACAGGTGGTGGGAATGTACAAATAGCAGTGCTTACAATGAGATGGAGAAGGTTCCCTTGTGTAATATaGAGAAAGGGATTCTTACAC +
Preference number: 4 (lower is better)
Translates to: LTGGGNVQIAVLTMRWRRFPCVI*RKGFLH
Trigger: GTGTAAGAATCCCTTTCTTCATATTACACAAGGGAA...CCTTCTCCATCTCATTGTAAGCACTGCTATTTGTACATTCCCACCACCTGTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
CDS-3UTR TCA 90 bp GGTGGGAATGTACAAATAGCAGTGCTTACAATGAGATGGAGAAGGTTCCTAGGCCTTACTGAAGTTGCATaGTCATACACAGAATCATTC +
Preference number: 4 (lower is better)
Translates to: GGNVQIAVLTMRWRRFLGLTEVA*SYTESF
Trigger: GAATGATTCTGTGTATGATCATGCAACTTCAGTAAG...GCCTAGGAACCTTCTCCATCTCATTGTAAGCACTGCTATTTGTACATTCCCACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
CDS-3UTR TCA 90 bp GAAAAATGCCAGCCAGAAATACCACAGGGTGTTGATGGCAGGCAAAGTCAAGAACTTACTGAAGTTGCATaGTCATACACAGAATCATTC +
Preference number: 4 (lower is better)
Translates to: EKCQPEIPQGVDGRQSQELTEVA*SYTESF
Trigger: GAATGATTCTGTGTATGATCATGCAACTTCAGTAAG...TTCTTGACTTTGCCTGCCATCAACACCCTGTGGTATTTCTGGCTGGCATTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
CDS-3UTR GCA 90 bp GGTGGGAATGTACAAATAGCAGTGCTTACAATGAGATGGAGAAGGTTCCTAGGCGTGATCTTCATCACATaGTTTAAATACTTCCACCCA +
Preference number: 4 (lower is better)
Translates to: GGNVQIAVLTMRWRRFLGVIFIT*FKYFHP
Trigger: TGGGTGGAAGTATTTAAAGCATGTGATGAAGATCAC...GCCTAGGAACCTTCTCCATCTCATTGTAAGCACTGCTATTTGTACATTCCCACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000538485.6
CDS-3UTR CCA 90 bp GTAGAGTCGAGTCTGCTGACATTACAATCTATTGATCTCCCCAGAGTTACCAAAAATCCACTTCTATCTTaGAGGGCTTGTACCCAAACA +
Preference number: 4 (lower is better)
Translates to: VESSLLTLQSIDLPRVTKNPLLS*RACTQT
Trigger: TGTTTGGGTACAAGCCCTCCAAGATAGAAGTGGATT...TTTGGTAACTCTGGGGAGATCAATAGATTGTAATGTCAGCAGACTCGACTCTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316738.12
ENST00000555872.5
ENST00000556609.5
ENST00000557685.5
CDS-3UTR CCA 90 bp GTCTGTAGCATGACATCATTAGTAGAGTCGAGTCTGCTGACATTACAATCTATTATGCTTCCCAAGGCCTaGCTGATTGCTTGGAACATA +
Preference number: 4 (lower is better)
Translates to: VCSMTSLVESSLLTLQSIMLPKA*LIAWNI
Trigger: TATGTTCCAAGCAATCAGCCAGGCCTTGGGAAGCAT...AATAGATTGTAATGTCAGCAGACTCGACTCTACTAATGATGTCATGCTACAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR CCA 90 bp CTGCTGACATTACAATCTATTGATCTCCCCAGAGTTACCAAAAGTAGTTCACAAGCGACAGTGCAATCATaGCTCACTGAAGCTTCAAAC +
Preference number: 4 (lower is better)
Translates to: LLTLQSIDLPRVTKSSSQATVQS*LTEASN
Trigger: GTTTGAAGCTTCAGTGAGCCATGATTGCACTGTCGC...TTGTGAACTACTTTTGGTAACTCTGGGGAGATCAATAGATTGTAATGTCAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR CCA 90 bp TGTAGCATGACATCATTAGTAGAGTCGAGTCTGCTGACATTACAATCTATTGATCTCTATCATCCAGGCTaGAGTGCGACAGTGCAATCA +
Preference number: 4 (lower is better)
Translates to: CSMTSLVESSLLTLQSIDLYHPG*SATVQS
Trigger: TGATTGCACTGTCGCACTCCAGCCTGGATGATAGAG...ATCAATAGATTGTAATGTCAGCAGACTCGACTCTACTAATGATGTCATGCTACA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR CCA 90 bp TGTAGCATGACATCATTAGTAGAGTCGAGTCTGCTGACATTACAATCTATTGATGAACGTGAACACACATaGCTAAGTGTCTGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: CSMTSLVESSLLTLQSIDEREHT*LSVWVQ
Trigger: CTGCACCCAGACACTTAGCCATGTGTGTTCACGTTC...ATCAATAGATTGTAATGTCAGCAGACTCGACTCTACTAATGATGTCATGCTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR CCA 90 bp TACTTCTTCGGTCATGCCATTCACACAGAAGGTATAGCTGATGACTGTTATCTAGTGCTTACAATGAGATaGAGAAGGTTCCTAGGCATG +
Preference number: 4 (lower is better)
Translates to: YFFGHAIHTEGIADDCYLVLTMR*RRFLGM
Trigger: CATGCCTAGGAACCTTCTCCATCTCATTGTAAGCAC...TAGATAACAGTCATCAGCTATACCTTCTGTGTGAATGGCATGACCGAAGAAGTA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
CDS-3UTR CCA 90 bp ATTCTTTCTTCTCTGGACCGACAAGAGTTTTCCCTTTGCAGGCCTCTTCCTGAGCGGTTTGCAACAGACTaGAAATTTATAAAAAGTGGT +
Preference number: 4 (lower is better)
Translates to: ILSSLDRQEFSLCRPLPERFATD*KFIKSG
Trigger: ACCACTTTTTATAAATTTCCAGTCTGTTGCAAACCG...CTCAGGAAGAGGCCTGCAAAGGGAAAACTCTTGTCGGTCCAGAGAAGAAAGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556639.5
CDS-3UTR TCA 90 bp CTGCTGACATTACAATCTATTGATCTCCCCAGAGTTACCAAAAGTAGTTCACAAAGGTGTCAAAGGCTGTaGAGATGTGTCTTACTTCGT +
Preference number: 4 (lower is better)
Translates to: LLTLQSIDLPRVTKSSSQRCQRL*RCVLLR
Trigger: ACGAAGTAAGACACATCTTCACAGCCTTTGACACCT...TTGTGAACTACTTTTGGTAACTCTGGGGAGATCAATAGATTGTAATGTCAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316738.12
ENST00000555872.5
ENST00000556609.5
ENST00000557685.5
CDS-3UTR TCA 90 bp CTGCTGACATTACAATCTATTGATCTCCCCAGAGTTACCAAAAGTAGTTCACAAACCTTCACTAAATGCTaGGTGTCCAGCATTGCTGTT +
Preference number: 4 (lower is better)
Translates to: LLTLQSIDLPRVTKSSSQTFTKC*VSSIAV
Trigger: AACAGCAATGCTGGACACTCAGCATTTAGTGAAGGT...TTGTGAACTACTTTTGGTAACTCTGGGGAGATCAATAGATTGTAATGTCAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR GCA 90 bp TGTAGCATGACATCATTAGTAGAGTCGAGTCTGCTGACATTACAATCTATTGATCATCCTAAAGGGTTCTaGAAACATGTCTCTTGCCCC +
Preference number: 4 (lower is better)
Translates to: CSMTSLVESSLLTLQSIDHPKGF*KHVSCP
Trigger: GGGGCAAGAGACATGTTTGCAGAACCCTTTAGGATG...ATCAATAGATTGTAATGTCAGCAGACTCGACTCTACTAATGATGTCATGCTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR GCA 90 bp ACATCATTAGTAGAGTCGAGTCTGCTGACATTACAATCTATTGATCTCCCCAGACAGCATTGCTGTTCTTaGTCCAGTATAGCAGTTACT +
Preference number: 4 (lower is better)
Translates to: TSLVESSLLTLQSIDLPRQHCCS*SSIAVT
Trigger: AGTAACTGCTATACTGGAGCAAGAACAGCAATGCTG...TCTGGGGAGATCAATAGATTGTAATGTCAGCAGACTCGACTCTACTAATGATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR GCA 90 bp TGTAAGACTCTTCCAATCAGCATAACAGAAGAGCCTATTTGTTTTACCCAAGCTGATGGGAGCATTTGGTaGCTCGATATTGCCACTTTA +
Preference number: 4 (lower is better)
Translates to: CKTLPISITEEPICFTQADGSIW*LDIATL
Trigger: TAAAGTGGCAATATCGAGGCACCAAATGCTCCCATC...AGCTTGGGTAAAACAAATAGGCTCTTCTGTTATGCTGATTGGAAGAGTCTTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
CDS-3UTR GCA 90 bp AGGAGAGTTAGATGTCCTATGTCCTTTGACCTTCCCTTGTGTAATATGAAGAAAACTCCACAAGTTGGCTaGTGGCAGAAAGGAATTATG +
Preference number: 4 (lower is better)
Translates to: RRVRCPMSFDLPLCNMKKTPQVG*WQKGIM
Trigger: CATAATTCCTTTCTGCCAGCAGCCAACTTGTGGAGT...TTTCTTCATATTACACAAGGGAAGGTCAAAGGACATAGGACATCTAACTCTCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
CDS-3UTR CCA 90 bp CATGAAATAAAAGTTGGGACCTCAAGAAGTCTACTTCTTCGGTCATGCCATTCAGGATGTTTCTATACCTaGAAGCAGGCAGATACTCAA +
Preference number: 4 (lower is better)
Translates to: HEIKVGTSRSLLLRSCHSGCFYT*KQADTQ
Trigger: TTGAGTATCTGCCTGCTTCCAGGTATAGAAACATCC...TGAATGGCATGACCGAAGAAGTAGACTTCTTGAGGTCCCAACTTTTATTTCATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
CDS-3UTR CCA 90 bp AGTCTGCTGACATTACAATCTATTGATCTCCCCAGAGTTACCAAAAGTAGTTCACTACTTCCAATGAGATaGAGAAGGTTCCTAGGCATG +
Preference number: 4 (lower is better)
Translates to: SLLTLQSIDLPRVTKSSSLLPMR*RRFLGM
Trigger: CATGCCTAGGAACCTTCTCCATCTCATTGGAAGTAG...TGAACTACTTTTGGTAACTCTGGGGAGATCAATAGATTGTAATGTCAGCAGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000557685.5
CDS-3UTR TCA 90 bp TCATTAGTAGAGTCGAGTCTGCTGACATTACAATCTATTGATCTCCCCAGAGTTGACATTACAATCTATTaGTCTCCCCAGAGTTACCAA +
Preference number: 4 (lower is better)
Translates to: SLVESSLLTLQSIDLPRVDITIY*SPQSYQ
Trigger: TTGGTAACTCTGGGGAGATCAATAGATTGTAATGTC...AACTCTGGGGAGATCAATAGATTGTAATGTCAGCAGACTCGACTCTACTAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316738.12
ENST00000555872.5
ENST00000556609.5
ENST00000557685.5
CDS-3UTR GCA 90 bp GTAGAGTCGAGTCTGCTGACATTACAATCTATTGATCTCCCCAGAGTTACCAAAGTGATCTTCATCACATaGTTTAAATACTTCCACCCA +
Preference number: 4 (lower is better)
Translates to: VESSLLTLQSIDLPRVTKVIFIT*FKYFHP
Trigger: TGGGTGGAAGTATTTAAAGCATGTGATGAAGATCAC...TTTGGTAACTCTGGGGAGATCAATAGATTGTAATGTCAGCAGACTCGACTCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000316738.12
CDS-3UTR CCA 90 bp AGGAGAGTTAGATGTCCTATGTCCTTTGACCTTCCCTTGTGTAATATGAAGAAAGGATGTTTCTATACCTaGAAGCAGGCAGATACTCAA +
Preference number: 4 (lower is better)
Translates to: RRVRCPMSFDLPLCNMKKGCFYT*KQADTQ
Trigger: TTGAGTATCTGCCTGCTTCCAGGTATAGAAACATCC...TTTCTTCATATTACACAAGGGAAGGTCAAAGGACATAGGACATCTAACTCTCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
CDS-3UTR CCA 90 bp GATGACTTCCAGGTTTGTTGCAAACAACGTGAAATACACAAATCATCAGGTAATACAGAATCCACTTCTTaGAGGGCTTGTACCCAAACA +
Preference number: 4 (lower is better)
Translates to: DDFQVCCKQREIHKSSGNTESTS*RACTQT
Trigger: TGTTTGGGTACAAGCCCTCCAAGAAGTGGATTCTGT...ATTACCTGATGATTTGTGTATTTCACGTTGTTTGCAACAAACCTGGAAGTCATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556639.5
CDS-3UTR CCA 90 bp GATGACTTCCAGGTTTGTTGCAAACAACGTGAAATACACAAATCATCAGGTAATTACAGGATATATTGCTaGCACTCAGGTCTGTTGAGG +
Preference number: 4 (lower is better)
Translates to: DDFQVCCKQREIHKSSGNYRIYC*HSGLLR
Trigger: CCTCAACAGACCTGAGTGCCAGCAATATATCCTGTA...ATTACCTGATGATTTGTGTATTTCACGTTGTTTGCAACAAACCTGGAAGTCATC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556639.5
CDS-3UTR TCA 90 bp AGTCTGCTGACATTACAATCTATTGATCTCCCCAGAGTTACCAAAAGTAGTTCAGACATTACAATCTATTaGTCTCCCCAGAGTTACCAA +
Preference number: 4 (lower is better)
Translates to: SLLTLQSIDLPRVTKSSSDITIY*SPQSYQ
Trigger: TTGGTAACTCTGGGGAGATCAATAGATTGTAATGTC...TGAACTACTTTTGGTAACTCTGGGGAGATCAATAGATTGTAATGTCAGCAGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000316738.12
ENST00000555872.5
ENST00000556609.5
ENST00000557685.5
CDS-3UTR TCA 90 bp TACTTCTTCGGTCATGCCATTCACACAGAAGGTATAGCTGATGACTGTTATCTATTCCCTTGTGTAATATaGAGAAAGGGATTCTTACAC +
Preference number: 4 (lower is better)
Translates to: YFFGHAIHTEGIADDCYLFPCVI*RKGFLH
Trigger: GTGTAAGAATCCCTTTCTTCATATTACACAAGGGAA...TAGATAACAGTCATCAGCTATACCTTCTGTGTGAATGGCATGACCGAAGAAGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
CDS-3UTR TCA 90 bp CTGATGTACATTTTACAAGGATCATTGCTGGACTTATTTATTGGGTGGAGAAGACCCTCCATTCCATTGTaGGACTGGTTTCTTTTGTAT +
Preference number: 4 (lower is better)
Translates to: LMYILQGSLLDLFIGWRRPSIPL*DWFLLY
Trigger: ATACAAAAGAAACCAGTCTCACAATGGAATGGAGGG...TCTTCTCCACCCAATAAATAAGTCCAGCAATGATCCTTGTAAAATGTACATCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556639.5
CDS-3UTR GCA 90 bp TGTAAGACTCTTCCAATCAGCATAACAGAAGAGCCTATTTGTTTTACCCAAGCTTTGGTGCCTCGATATTaGCACTTTACATCATCATGT +
Preference number: 4 (lower is better)
Translates to: CKTLPISITEEPICFTQALVPRY*HFTSSC
Trigger: ACATGATGATGTAAAGTGGCAATATCGAGGCACCAA...AGCTTGGGTAAAACAAATAGGCTCTTCTGTTATGCTGATTGGAAGAGTCTTACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
CDS-3UTR CCA 90 bp TGTAGCATGACATCATTAGTAGAGTCGAGTCTGCTGACATTACAATCTATTGATAATCCACTTCTATCTTaGAGGGCTTGTACCCAAACA +
Preference number: 4 (lower is better)
Translates to: CSMTSLVESSLLTLQSIDNPLLS*RACTQT
Trigger: TGTTTGGGTACAAGCCCTCCAAGATAGAAGTGGATT...ATCAATAGATTGTAATGTCAGCAGACTCGACTCTACTAATGATGTCATGCTACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316738.12
ENST00000555872.5
ENST00000556609.5
ENST00000557685.5
3UTR CAA 72 bp AGGAGAGTTAGATGTCCTATGTCCTTTGACCTTCCCTaGTGTAATATGAAGAAAGGGATTCTTACACCAAAA +
Preference number: 4 (lower is better)
Translates to: RRVRCPMSFDLP*CNMKKGILTPK
Trigger: TTTTGGTGTAAGAATCCCTTTCTTCATATTACACAAGGGAAGGTCAAAGGACATAGGACATCTAACTCTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
CDS-3UTR TCA 90 bp GTCTGTAGCATGACATCATTAGTAGAGTCGAGTCTGCTGACATTACAATCTATTATCCAGGATACCAAATaGCATTTAGTTGTCACATCT +
Preference number: 4 (lower is better)
Translates to: VCSMTSLVESSLLTLQSIIQDTK*HLVVTS
Trigger: AGATGTGACAACTAAATGTCATTTGGTATCCTGGAT...AATAGATTGTAATGTCAGCAGACTCGACTCTACTAATGATGTCATGCTACAGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR TCA 90 bp AGAGAGTTTAAGAAGCACTGCCTTATAGGATGTAATATAAAACGAGCCTTTCCTTTATTAATGTACATCTaGGAATCTGCACAGGTGAGG +
Preference number: 4 (lower is better)
Translates to: REFKKHCLIGCNIKRAFPLLMYI*ESAQVR
Trigger: CCTCACCTGTGCAGATTCTCAGATGTACATTAATAA...AGGAAAGGCTCGTTTTATATTACATCCTATAAGGCAGTGCTTCTTAAACTCTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556639.5
CDS-3UTR GCA 90 bp GATGACTTCCAGGTTTGTTGCAAACAACGTGAAATACACAAATCATCAGGTAATATTTACAGGATATATTaGTGGCACTCAGGTCTGTTG +
Preference number: 4 (lower is better)
Translates to: DDFQVCCKQREIHKSSGNIYRIY*WHSGLL
Trigger: CAACAGACCTGAGTGCCAGCAATATATCCTGTAAAT...ATTACCTGATGATTTGTGTATTTCACGTTGTTTGCAACAAACCTGGAAGTCATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556639.5
CDS-3UTR CCA 90 bp GATGACTTCCAGGTTTGTTGCAAACAACGTGAAATACACAAATCATCAGGTAATTTGACAGCTTGGATGTaGAGGGTAAGAAAAAGAAAG +
Preference number: 4 (lower is better)
Translates to: DDFQVCCKQREIHKSSGNLTAWM*RVRKRK
Trigger: CTTTCTTTTTCTTACCCTCCACATCCAAGCTGTCAA...ATTACCTGATGATTTGTGTATTTCACGTTGTTTGCAACAAACCTGGAAGTCATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556639.5
CDS-3UTR GCA 90 bp AGAGAGTTTAAGAAGCACTGCCTTATAGGATGTAATATAAAACGAGCCTTTCCTGTGATCTTCATCACATaGTTTAAATACTTCCACCCA +
Preference number: 4 (lower is better)
Translates to: REFKKHCLIGCNIKRAFPVIFIT*FKYFHP
Trigger: TGGGTGGAAGTATTTAAAGCATGTGATGAAGATCAC...AGGAAAGGCTCGTTTTATATTACATCCTATAAGGCAGTGCTTCTTAAACTCTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556639.5
CDS-3UTR CCA 90 bp AGTCAATTACTTATTGCATGCCTGTGCCAAAATATCTCCCGTAACCCATATATGTTTACAGTGATGATTTaGACTCAGGGACATTATCTT +
Preference number: 4 (lower is better)
Translates to: SQLLIACLCQNISRNPYMFTVMI*TQGHYL
Trigger: AAGATAATGTCCCTGAGTCCAAATCATCACTGTAAA...CATATATGGGTTACGGGAGATATTTTGGCACAGGCATGCAATAAGTAATTGACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS TCA 90 bp CCCTTTGGACAGGCAGCCCAGGTCTTATCTGCACACCCGGCAGAGTaGGACCCAGACACGGGAGAGGAAGCGAGAGGCCCAGGCCAAGCT +
Preference number: 5 (lower is better)
Translates to: PFGQAAQVLSAHPAE*DPDTGEEARGPGQA
Trigger: AGCTTGGCCTGGGCCTCTCGCTTCCTCTCCCGTGTCTGGGTCTCACTCTGCCGGGTGTGCAGATAAGACCTGGGCTGCCTGTCCAAAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555872.5
CDS CCA 90 bp TCCTGTGTTCCGAGGGACTGGCTTCCCACGTCCGCGACCTGGCTCTaGCCTCGGAGAAGAACATCGCGACTACAACAACCGAGCCCCAGC +
Preference number: 5 (lower is better)
Translates to: SCVPRDWLPTSATWL*PRRRTSRLQQPSPS
Trigger: GCTGGGGCTCGGTTGTTGTAGTCGCGATGTTCTTCTCCGAGGCCAGAGCCAGGTCGCGGACGTGGGAAGCCAGTCCCTCGGAACACAGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316738.12
ENST00000538485.6
ENST00000555608.5
ENST00000556639.5
CDS CCA 90 bp CCCACTTCCTGTGTTCCGAGGGACTGGCTTCCCACGTCCGCGACCTaGCTCTGGCCTCGGAGAAGAACATCGCGACTACAACAACCGAGC +
Preference number: 5 (lower is better)
Translates to: PTSCVPRDWLPTSAT*LWPRRRTSRLQQPS
Trigger: GCTCGGTTGTTGTAGTCGCGATGTTCTTCTCCGAGGCCAGAGCCAGGTCGCGGACGTGGGAAGCCAGTCCCTCGGAACACAGGAAGTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316738.12
ENST00000538485.6
ENST00000555608.5
ENST00000556639.5
CDS GCA 90 bp CAGTCATTAACCACGACCCTTTGGACAGGCAGCCCAGGTCTTATCTaGACACCCGGCAGAGTGAGACCCAGACACGGGAGAGGAAGCGAG +
Preference number: 5 (lower is better)
Translates to: QSLTTTLWTGSPGLI*TPGRVRPRHGRGSE
Trigger: CTCGCTTCCTCTCCCGTGTCTGGGTCTCACTCTGCCGGGTGTGCAGATAAGACCTGGGCTGCCTGTCCAAAGGGTCGTGGTTAATGACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555872.5
CDS CCA 90 bp CCAGGAGCCCTGCAGCTCCAGGATCAGTCATTAACCACGACCCTTTaGACAGGCAGCCCAGGTCTTATCTGCACACCCGGCAGAGTGAGA +
Preference number: 5 (lower is better)
Translates to: PGALQLQDQSLTTTL*TGSPGLICTPGRVR
Trigger: TCTCACTCTGCCGGGTGTGCAGATAAGACCTGGGCTGCCTGTCCAAAGGGTCGTGGTTAATGACTGATCCTGGAGCTGCAGGGCTCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555872.5
ENST00000556005.1
CDS-3UTR CAA 90 bp AGAGTGAGGAGGAGGAGGACCACCAGTGCCATCCCTAGCCCCAGCTCTAGCAATATTAACCACGACCCTTaGGACAGGCAGCCCAGGTCT +
Preference number: 5 (lower is better)
Translates to: RVRRRRTTSAIPSPSSSNINHDP*DRQPRS
Trigger: AGACCTGGGCTGCCTGTCCAAAGGGTCGTGGTTAAT...ATTGCTAGAGCTGGGGCTAGGGATGGCACTGGTGGTCCTCCTCCTCCTCACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555872.5
CDS-3UTR CAA 90 bp AGAGTGAGGAGGAGGAGGACCACCAGTGCCATCCCTAGCCCCAGCTCTAGCAATGCTGAGTGTCCAGCATaGCTGTTCTTGCTCCAGTAT +
Preference number: 5 (lower is better)
Translates to: RVRRRRTTSAIPSPSSSNAECPA*LFLLQY
Trigger: ATACTGGAGCAAGAACAGCAATGCTGGACACTCAGC...ATTGCTAGAGCTGGGGCTAGGGATGGCACTGGTGGTCCTCCTCCTCCTCACTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR CAA 90 bp AGAGTGAGGAGGAGGAGGACCACCAGTGCCATCCCTAGCCCCAGCTCTAGCAATGAATCCACTTCTATCTaGGAGGGCTTGTACCCAAAC +
Preference number: 5 (lower is better)
Translates to: RVRRRRTTSAIPSPSSSNESTSI*EGLYPN
Trigger: GTTTGGGTACAAGCCCTCCAAGATAGAAGTGGATTC...ATTGCTAGAGCTGGGGCTAGGGATGGCACTGGTGGTCCTCCTCCTCCTCACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR CAA 90 bp ATGGATGTTGGGGGCGGTGTGTCCACACAGTGTGTAAGGCTCTTCACCATGGGGCAGAGTCGAGATTTGTaGACAGCTTGGATGTGGAGG +
Preference number: 5 (lower is better)
Translates to: MDVGGGVSTQCVRLFTMGQSRDL*TAWMWR
Trigger: CCTCCACATCCAAGCTGTCAACAAATCTCGACTCTG...CCCCATGGTGAAGAGCCTTACACACTGTGTGGACACACCGCCCCCAACATCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556639.5
CDS-3UTR CAA 90 bp CTCAAGGCTTGCTTCTCCACAGTGAGACTCCCAAGCCTAGACCATCCTAAAGGGCCCAAGCCGATTTCTTaGTCTTGCACAGACAGTGCC +
Preference number: 5 (lower is better)
Translates to: LKACFSTVRLPSLDHPKGPKPIS*SCTDSA
Trigger: GGCACTGTCTGTGCAAGACAAAGAAATCGGCTTGGG...CCCTTTAGGATGGTCTAGGCTTGGGAGTCTCACTGTGGAGAAGCAAGCCTTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR CAA 90 bp GCCCGAGAGGGCTTGCTCATGTTAGCCCAAGCCGATTTCTTTGTCTTGCACAGAGAAAGGAGATGGAACTaGGAGGTAGCCGTAGTCCTG +
Preference number: 5 (lower is better)
Translates to: AREGLLMLAQADFFVLHRERRWN*EVAVVL
Trigger: CAGGACTACGGCTACCTCCAAGTTCCATCTCCTTTC...TCTGTGCAAGACAAAGAAATCGGCTTGGGCTAACATGAGCAAGCCCTCTCGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555872.5
CDS-3UTR CAA 90 bp AGGTTTGCACTGGGTGACACAGTGGAGGTGCTGAGAGGTGGTCAGAGTCGAGATCACAGAATCCACTTCTaGGAGGGCTTGTACCCAAAC +
Preference number: 5 (lower is better)
Translates to: RFALGDTVEVLRGGQSRDHRIHF*EGLYPN
Trigger: GTTTGGGTACAAGCCCTCCAAGAAGTGGATTCTGTG...ATCTCGACTCTGACCACCTCTCAGCACCTCCACTGTGTCACCCAGTGCAAACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556639.5
CDS-3UTR CAA 90 bp CATGCAGAGAAAAATGCCAGCCAGAAATACCACAGGGTGTTGATGGCAGGCAAATGTGCACTCAGGATCTaGGACGCTGGGTCAGGGCAT +
Preference number: 5 (lower is better)
Translates to: HAEKNASQKYHRVLMAGKCALRI*DAGSGH
Trigger: ATGCCCTGACCCAGCGTCCAAGATCCTGAGTGCACA...TTTGCCTGCCATCAACACCCTGTGGTATTTCTGGCTGGCATTTTTCTCTGCATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
CDS-3UTR CAA 90 bp CCATGCAGAGAAAAATGCCAGCCAGAAATACCACAGGGTGTTGATGGCAGGCAAATTAACCACGACCCTTaGGACAGGCAGCCCAGGTCT +
Preference number: 5 (lower is better)
Translates to: PCREKCQPEIPQGVDGRQINHDP*DRQPRS
Trigger: AGACCTGGGCTGCCTGTCCAAAGGGTCGTGGTTAAT...TTGCCTGCCATCAACACCCTGTGGTATTTCTGGCTGGCATTTTTCTCTGCATGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000556005.1
CDS-3UTR CAA 90 bp AGGTTTGCACTGGGTGACACAGTGGAGGTGCTGAGAGGTGGTCAGAGTCGAGATCACTTCTTGGAGGGCTaGTACCCAAACAGCATTACA +
Preference number: 5 (lower is better)
Translates to: RFALGDTVEVLRGGQSRDHFLEG*YPNSIT
Trigger: TGTAATGCTGTTTGGGTACAAGCCCTCCAAGAAGTG...ATCTCGACTCTGACCACCTCTCAGCACCTCCACTGTGTCACCCAGTGCAAACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556639.5
CDS GCA 90 bp GAAGGTGACATTACTGAAAAGATGGGCAGAAATGTCTTGAGAGCCTaGATAAGTCAGCTCCAGCACGGCACTGGATCCAGTAAGCCCCCA +
Preference number: 5 (lower is better)
Translates to: EGDITEKMGRNVLRA*ISQLQHGTGSSKPP
Trigger: TGGGGGCTTACTGGATCCAGTGCCGTGCTGGAGCTGACTTATGCAGGCTCTCAAGACATTTCTGCCCATCTTTTCAGTAATGTCACCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550103.2
CDS-3UTR CAA 90 bp AGAGTGAGGAGGAGGAGGACCACCAGTGCCATCCCTAGCCCCAGCTCTAGCAATCTTTACAGTGATGATTaGGACTCAGGGACATTATCT +
Preference number: 5 (lower is better)
Translates to: RVRRRRTTSAIPSPSSSNLYSDD*DSGTLS
Trigger: AGATAATGTCCCTGAGTCCAAATCATCACTGTAAAG...ATTGCTAGAGCTGGGGCTAGGGATGGCACTGGTGGTCCTCCTCCTCCTCACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR CAA 90 bp AATGCTGAGTGTCCAGCATTGCTGTTCTTGCTCCAGTATAGCAGTTACTGGAGCGCCGATTTCTTTGTCTaGCACAGACAGTGCCCTGGG +
Preference number: 5 (lower is better)
Translates to: NAECPALLFLLQYSSYWSADFFV*HRQCPG
Trigger: CCCAGGGCACTGTCTGTGCAAGACAAAGAAATCGGC...GCTCCAGTAACTGCTATACTGGAGCAAGAACAGCAATGCTGGACACTCAGCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR CAA 90 bp CTAAATGCTGAGTGTCCAGCATTGCTGTTCTTGCTCCAGTATAGCAGTTACTGGATAGCCCGAGAGGGCTaGCTCATGTTAGCCCAAGCC +
Preference number: 5 (lower is better)
Translates to: LNAECPALLFLLQYSSYWIAREG*LMLAQA
Trigger: GGCTTGGGCTAACATGAGCAAGCCCTCTCGGGCTAT...CCAGTAACTGCTATACTGGAGCAAGAACAGCAATGCTGGACACTCAGCATTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR CAA 90 bp AGGTTTGCACTGGGTGACACAGTGGAGGTGCTGAGAGGTGGTCAGAGTCGAGATTGGCAGAGTAAACACTaGCTGAAAATCCTTAGGCCT +
Preference number: 5 (lower is better)
Translates to: RFALGDTVEVLRGGQSRDWQSKH*LKILRP
Trigger: AGGCCTAAGGATTTTCAGCAAGTGTTTACTCTGCCA...ATCTCGACTCTGACCACCTCTCAGCACCTCCACTGTGTCACCCAGTGCAAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556639.5
CDS-3UTR CAA 90 bp TATAGCCCGAGAGGGCTTGCTCATGTTAGCCCAAGCCGATTTCTTTGTCTTGCAGTCCTTTCCGGTAATTaGGGAGCCACCTGCCTAAAT +
Preference number: 5 (lower is better)
Translates to: YSPRGLAHVSPSRFLCLAVLSGN*GATCLN
Trigger: ATTTAGGCAGGTGGCTCCCAAATTACCGGAAAGGAC...TGCAAGACAAAGAAATCGGCTTGGGCTAACATGAGCAAGCCCTCTCGGGCTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR CAA 90 bp CATTGGCAGGAAAAGTCTGCCCCTCTGCAGATATTAGGAGATGATGAGATTCAGGCCGATTTCTTTGTCTaGCACAGACAGTGCCCTGGG +
Preference number: 5 (lower is better)
Translates to: HWQEKSAPLQILGDDEIQADFFV*HRQCPG
Trigger: CCCAGGGCACTGTCTGTGCAAGACAAAGAAATCGGC...CTGAATCTCATCATCTCCTAATATCTGCAGAGGGGCAGACTTTTCCTGCCAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR CAA 90 bp AAAGGGTTCTGCAAACATGTCTCTTGCCCCCAGTACCCTCATCACCCTGTTCTTGCTGAGTGTCCAGCATaGCTGTTCTTGCTCCAGTAT +
Preference number: 5 (lower is better)
Translates to: KGFCKHVSCPQYPHHPVLAECPA*LFLLQY
Trigger: ATACTGGAGCAAGAACAGCAATGCTGGACACTCAGC...AAGAACAGGGTGATGAGGGTACTGGGGGCAAGAGACATGTTTGCAGAACCCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR CAA 90 bp AAAGTTGGGACCTCAAGAAGTCTACTTCTTCGGTCATGCCATTCACACAGAAGGGCTTCCCAGAGCTTTTaGCCAACTGACAGGTGGTGG +
Preference number: 5 (lower is better)
Translates to: KVGTSRSLLLRSCHSHRRASQSF*PTDRWW
Trigger: CCACCACCTGTCAGTTGGCAAAAAGCTCTGGGAAGC...CCTTCTGTGTGAATGGCATGACCGAAGAAGTAGACTTCTTGAGGTCCCAACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
CDS-3UTR CAA 90 bp TTGGGACCTCAAGAAGTCTACTTCTTCGGTCATGCCATTCACACAGAAGGTATATGTGCACTCAGGATCTaGGACGCTGGGTCAGGGCAT +
Preference number: 5 (lower is better)
Translates to: LGPQEVYFFGHAIHTEGICALRI*DAGSGH
Trigger: ATGCCCTGACCCAGCGTCCAAGATCCTGAGTGCACA...TATACCTTCTGTGTGAATGGCATGACCGAAGAAGTAGACTTCTTGAGGTCCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
CDS-3UTR CAA 90 bp CAGACGTCAGTACTCCCCTGTGCCATAGATGTTCCACATGAACCTCCAGGAAATGCCCAGAGTGGTTGTTaGAAGGGGATGTGGATTAAG +
Preference number: 5 (lower is better)
Translates to: QTSVLPCAIDVPHEPPGNAQSGC*KGMWIK
Trigger: CTTAATCCACATCCCCTTCAAACAACCACTCTGGGC...ATTTCCTGGAGGTTCATGTGGAACATCTATGGCACAGGGGAGTACTGACGTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000556639.5
CDS-3UTR CAA 90 bp AGGTTTGCACTGGGTGACACAGTGGAGGTGCTGAGAGGTGGTCAGAGTCGAGATAGATTTGTTGACAGCTaGGATGTGGAGGGTAAGAAA +
Preference number: 5 (lower is better)
Translates to: RFALGDTVEVLRGGQSRDRFVDS*DVEGKK
Trigger: TTTCTTACCCTCCACATCCAAGCTGTCAACAAATCT...ATCTCGACTCTGACCACCTCTCAGCACCTCCACTGTGTCACCCAGTGCAAACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556639.5
CDS-3UTR CAA 90 bp TGCCTGTGCACTCAGGATCTTGGACGCTGGGTCAGGGCATGGACCTTATGCACAGTGATCTTACTGAAGTaGCATGATCATACACAGAAT +
Preference number: 5 (lower is better)
Translates to: CLCTQDLGRWVRAWTLCTVILLK*HDHTQN
Trigger: ATTCTGTGTATGATCATGCAACTTCAGTAAGATCAC...TGTGCATAAGGTCCATGCCCTGACCCAGCGTCCAAGATCCTGAGTGCACAGGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
CDS-3UTR CAA 90 bp TTAGCCCAAGCCGATTTCTTTGTCTTGCACAGACAGTGCCCTGGGACCACTTTATCTATCTTGGAGGGCTaGTACCCAAACAGCATTACA +
Preference number: 5 (lower is better)
Translates to: LAQADFFVLHRQCPGTTLSILEG*YPNSIT
Trigger: TGTAATGCTGTTTGGGTACAAGCCCTCCAAGATAGA...TAAAGTGGTCCCAGGGCACTGTCTGTGCAAGACAAAGAAATCGGCTTGGGCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR CAA 90 bp TATCCATGCAGAGAAAAATGCCAGCCAGAAATACCACAGGGTGTTGATGGCAGGGAATCCACTTCTATCTaGGAGGGCTTGTACCCAAAC +
Preference number: 5 (lower is better)
Translates to: YPCREKCQPEIPQGVDGRESTSI*EGLYPN
Trigger: GTTTGGGTACAAGCCCTCCAAGATAGAAGTGGATTC...CCTGCCATCAACACCCTGTGGTATTTCTGGCTGGCATTTTTCTCTGCATGGATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538485.6
ENST00000556005.1
ENST00000557685.5
CDS-3UTR CAA 90 bp TTAGCCCAAGCCGATTTCTTTGTCTTGCACAGACAGTGCCCTGGGACCACTTTAGGCCTGGCTGATTGCTaGGAACATAGTAAGTATTCT +
Preference number: 5 (lower is better)
Translates to: LAQADFFVLHRQCPGTTLGLADC*EHSKYS
Trigger: AGAATACTTACTATGTTCCAAGCAATCAGCCAGGCC...TAAAGTGGTCCCAGGGCACTGTCTGTGCAAGACAAAGAAATCGGCTTGGGCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR CAA 90 bp TCATTAGTAGAGTCGAGTCTGCTGACATTACAATCTATTGATCTCCCCAGAGTTATAGCCCGAGAGGGCTaGCTCATGTTAGCCCAAGCC +
Preference number: 5 (lower is better)
Translates to: SLVESSLLTLQSIDLPRVIAREG*LMLAQA
Trigger: GGCTTGGGCTAACATGAGCAAGCCCTCTCGGGCTAT...AACTCTGGGGAGATCAATAGATTGTAATGTCAGCAGACTCGACTCTACTAATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR CAA 90 bp GGGAAGCAAAAGCAGCTTCCCAGAGCTTTTTGCCAACTGACAGGTGGTGGGAATTTTGGTGCCTCGATATaGCCACTTTACATCATCATG +
Preference number: 5 (lower is better)
Translates to: GKQKQLPRAFCQLTGGGNFGASI*PLYIIM
Trigger: CATGATGATGTAAAGTGGCAATATCGAGGCACCAAA...ATTCCCACCACCTGTCAGTTGGCAAAAAGCTCTGGGAAGCTGCTTTTGCTTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
CDS-3UTR CAA 90 bp CCTCAAGAAGTCTACTTCTTCGGTCATGCCATTCACACAGAAGGTATAGCTGATGAAAGGAGATGGAACTaGGAGGTAGCCGTAGTCCTG +
Preference number: 5 (lower is better)
Translates to: PQEVYFFGHAIHTEGIADERRWN*EVAVVL
Trigger: CAGGACTACGGCTACCTCCAAGTTCCATCTCCTTTC...ATCAGCTATACCTTCTGTGTGAATGGCATGACCGAAGAAGTAGACTTCTTGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556005.1
CDS-3UTR CAA 90 bp CAGACGTCAGTACTCCCCTGTGCCATAGATGTTCCACATGAACCTCCAGGAAATAATCAATGCCAGGTTTaGATGCTTACAGAGGTCACC +
Preference number: 5 (lower is better)
Translates to: QTSVLPCAIDVPHEPPGNNQCQV*MLTEVT
Trigger: GGTGACCTCTGTAAGCATCAAAACCTGGCATTGATT...ATTTCCTGGAGGTTCATGTGGAACATCTATGGCACAGGGGAGTACTGACGTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556639.5
CDS TCA 90 bp ATTACAACAGCAGTTTTAAAGTCCTCTCTGCTGAGATATCCTTTGTaGTCTTCATCACATGCTTTAAATACCGCGGCCACGCCCACCGCG +
Preference number: 5 (lower is better)
Translates to: ITTAVLKSSLLRYPL*SSSHALNTAATPTA
Trigger: CGCGGTGGGCGTGGCCGCGGTATTTAAAGCATGTGATGAAGATCACAAAGGATATCTCAGCAGAGAGGACTTTAAAACTGCTGTTGTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556609.5
CDS CCA 90 bp GTCAGGGGCATGGAAGGACCCATAGCTAACTATAGATTTCCCTCCTaGACCATGACACTATGCTGCAAGAGAAAAATGTTCCAGACTCAA +
Preference number: 5 (lower is better)
Translates to: VRGMEGPIANYRFPS*TMTLCCKRKMFQTQ
Trigger: TTGAGTCTGGAACATTTTTCTCTTGCAGCATAGTGTCATGGTCCAGGAGGGAAATCTATAGTTAGCTATGGGTCCTTCCATGCCCCTGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554761.5
CDS-3UTR CAA 90 bp CATATCCATGCAGAGAAAAATGCCAGCCAGAAATACCACAGGGTGTTGATGGCAGAATCCACTTCTATCTaGGAGGGCTTGTACCCAAAC +
Preference number: 5 (lower is better)
Translates to: HIHAEKNASQKYHRVLMAESTSI*EGLYPN
Trigger: GTTTGGGTACAAGCCCTCCAAGATAGAAGTGGATTC...TGCCATCAACACCCTGTGGTATTTCTGGCTGGCATTTTTCTCTGCATGGATATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538485.6
ENST00000556005.1
ENST00000557685.5
CDS-3UTR CAA 90 bp CCTCTGTATATAGCCCGAGAGGGCTTGCTCATGTTAGCCCAAGCCGATTTCTTTTTCGTTCCGATATCGTaGAGCTTCCTTCTTTTTCCT +
Preference number: 5 (lower is better)
Translates to: PLYIAREGLLMLAQADFFFVPIS*SFLLFP
Trigger: AGGAAAAAGAAGGAAGCTCAACGATATCGGAACGAA...AAAGAAATCGGCTTGGGCTAACATGAGCAAGCCCTCTCGGGCTATATACAGAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR CAA 90 bp CAGACGTCAGTACTCCCCTGTGCCATAGATGTTCCACATGAACCTCCAGGAAATTTCGTTCCGATATCGTaGAGCTTCCTTCTTTTTCCT +
Preference number: 5 (lower is better)
Translates to: QTSVLPCAIDVPHEPPGNFVPIS*SFLLFP
Trigger: AGGAAAAAGAAGGAAGCTCAACGATATCGGAACGAA...ATTTCCTGGAGGTTCATGTGGAACATCTATGGCACAGGGGAGTACTGACGTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000556639.5
CDS-3UTR CAA 90 bp ACATCATTAGTAGAGTCGAGTCTGCTGACATTACAATCTATTGATCTCCCCAGAAGGAAACTGGCACCATaGGCAGGAAAAGTCTGCCCC +
Preference number: 5 (lower is better)
Translates to: TSLVESSLLTLQSIDLPRRKLAP*AGKVCP
Trigger: GGGGCAGACTTTTCCTGCCAATGGTGCCAGTTTCCT...TCTGGGGAGATCAATAGATTGTAATGTCAGCAGACTCGACTCTACTAATGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR CAA 90 bp CCCTGTTCTTCCTCTGTATATAGCCCGAGAGGGCTTGCTCATGTTAGCCCAAGCTTTAGTTGTCACATCTaGTTAGGCTCCTCTTATTTG +
Preference number: 5 (lower is better)
Translates to: PCSSSVYSPRGLAHVSPSFSCHI*LGSSYL
Trigger: CAAATAAGAGGAGCCTAACAAGATGTGACAACTAAA...GCTTGGGCTAACATGAGCAAGCCCTCTCGGGCTATATACAGAGGAAGAACAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR CAA 90 bp AAAGTTGGGACCTCAAGAAGTCTACTTCTTCGGTCATGCCATTCACACAGAAGGATGATACTCCACAAGTaGGCTGCTGGCAGAAAGGAA +
Preference number: 5 (lower is better)
Translates to: KVGTSRSLLLRSCHSHRRMILHK*AAGRKE
Trigger: TTCCTTTCTGCCAGCAGCCAACTTGTGGAGTATCAT...CCTTCTGTGTGAATGGCATGACCGAAGAAGTAGACTTCTTGAGGTCCCAACTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
CDS-3UTR CAA 90 bp AGAGAAAAATGCCAGCCAGAAATACCACAGGGTGTTGATGGCAGGCAAAGTCAATCTATCTTGGAGGGCTaGTACCCAAACAGCATTACA +
Preference number: 5 (lower is better)
Translates to: REKCQPEIPQGVDGRQSQSILEG*YPNSIT
Trigger: TGTAATGCTGTTTGGGTACAAGCCCTCCAAGATAGA...TTGACTTTGCCTGCCATCAACACCCTGTGGTATTTCTGGCTGGCATTTTTCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000538485.6
ENST00000556005.1
ENST00000557685.5
CDS-3UTR CAA 90 bp GGTGTTGATGGCAGGCAAAGTCAAGAAAGAACTTTAAGTCAGCTTCCTGATGACGAATCCACTTCTATCTaGGAGGGCTTGTACCCAAAC +
Preference number: 5 (lower is better)
Translates to: GVDGRQSQERTLSQLPDDESTSI*EGLYPN
Trigger: GTTTGGGTACAAGCCCTCCAAGATAGAAGTGGATTC...GTCATCAGGAAGCTGACTTAAAGTTCTTTCTTGACTTTGCCTGCCATCAACACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000538485.6
ENST00000556005.1
ENST00000557685.5
CDS-3UTR CAA 90 bp AGTCTGCTGACATTACAATCTATTGATCTCCCCAGAGTTACCAAAAGTAGTTCAAGGAAACTGGCACCATaGGCAGGAAAAGTCTGCCCC +
Preference number: 5 (lower is better)
Translates to: SLLTLQSIDLPRVTKSSSRKLAP*AGKVCP
Trigger: GGGGCAGACTTTTCCTGCCAATGGTGCCAGTTTCCT...TGAACTACTTTTGGTAACTCTGGGGAGATCAATAGATTGTAATGTCAGCAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR CAA 90 bp TCACAAGTCTGTAGCATGACATCATTAGTAGAGTCGAGTCTGCTGACATTACAACTGCAAACATGTCTCTaGCCCCCAGTACCCTCATCA +
Preference number: 5 (lower is better)
Translates to: SQVCSMTSLVESSLLTLQLQTCL*PPVPSS
Trigger: TGATGAGGGTACTGGGGGCAAGAGACATGTTTGCAG...TTGTAATGTCAGCAGACTCGACTCTACTAATGATGTCATGCTACAGACTTGTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR CAA 90 bp GCTTCCCAAGGCCTGGCTGATTGCTTGGAACATAGTAAGTATTCTGTATGTGTACCAGCATTGCTGTTCTaGCTCCAGTATAGCAGTTAC +
Preference number: 5 (lower is better)
Translates to: ASQGLADCLEHSKYSVCVPALLF*LQYSSY
Trigger: GTAACTGCTATACTGGAGCAAGAACAGCAATGCTGG...TACACATACAGAATACTTACTATGTTCCAAGCAATCAGCCAGGCCTTGGGAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR CAA 90 bp AGGAGAGTTAGATGTCCTATGTCCTTTGACCTTCCCTTGTGTAATATGAAGAAAGCTTCCCAGAGCTTTTaGCCAACTGACAGGTGGTGG +
Preference number: 5 (lower is better)
Translates to: RRVRCPMSFDLPLCNMKKASQSF*PTDRWW
Trigger: CCACCACCTGTCAGTTGGCAAAAAGCTCTGGGAAGC...TTTCTTCATATTACACAAGGGAAGGTCAAAGGACATAGGACATCTAACTCTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
CDS TCA 90 bp ATTCTGAAGAAGGAAGGTCTCATAGCACCCACACTCAAATCACTGTaGCAGAGAAGATGTACCGTGGGTAGAATTAGTGACTGGAATGAG +
Preference number: 5 (lower is better)
Translates to: ILKKEGLIAPTLKSL*QRRCTVGRISDWNE
Trigger: CTCATTCCAGTCACTAATTCTACCCACGGTACATCTTCTCTGTCACAGTGATTTGAGTGTGGGTGCTATGAGACCTTCCTTCTTCAGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556078.1
CDS-3UTR CAA 90 bp CTAAATGCTGAGTGTCCAGCATTGCTGTTCTTGCTCCAGTATAGCAGTTACTGGTTCGTTCCGATATCGTaGAGCTTCCTTCTTTTTCCT +
Preference number: 5 (lower is better)
Translates to: LNAECPALLFLLQYSSYWFVPIS*SFLLFP
Trigger: AGGAAAAAGAAGGAAGCTCAACGATATCGGAACGAA...CCAGTAACTGCTATACTGGAGCAAGAACAGCAATGCTGGACACTCAGCATTTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR CAA 90 bp CATGAAATAAAAGTTGGGACCTCAAGAAGTCTACTTCTTCGGTCATGCCATTCAGTCCTTTCCGGTAATTaGGGAGCCACCTGCCTAAAT +
Preference number: 5 (lower is better)
Translates to: HEIKVGTSRSLLLRSCHSVLSGN*GATCLN
Trigger: ATTTAGGCAGGTGGCTCCCAAATTACCGGAAAGGAC...TGAATGGCATGACCGAAGAAGTAGACTTCTTGAGGTCCCAACTTTTATTTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
CDS-3UTR CAA 90 bp CTGCTGACATTACAATCTATTGATCTCCCCAGAGTTACCAAAAGTAGTTCACAACCCAAGCCGATTTCTTaGTCTTGCACAGACAGTGCC +
Preference number: 5 (lower is better)
Translates to: LLTLQSIDLPRVTKSSSQPKPIS*SCTDSA
Trigger: GGCACTGTCTGTGCAAGACAAAGAAATCGGCTTGGG...TTGTGAACTACTTTTGGTAACTCTGGGGAGATCAATAGATTGTAATGTCAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR CAA 90 bp CTGCTGACATTACAATCTATTGATCTCCCCAGAGTTACCAAAAGTAGTTCACAACTGCAAACATGTCTCTaGCCCCCAGTACCCTCATCA +
Preference number: 5 (lower is better)
Translates to: LLTLQSIDLPRVTKSSSQLQTCL*PPVPSS
Trigger: TGATGAGGGTACTGGGGGCAAGAGACATGTTTGCAG...TTGTGAACTACTTTTGGTAACTCTGGGGAGATCAATAGATTGTAATGTCAGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR CAA 90 bp TTAGCCCAAGCCGATTTCTTTGTCTTGCACAGACAGTGCCCTGGGACCACTTTATTTAGTTGTCACATCTaGTTAGGCTCCTCTTATTTG +
Preference number: 5 (lower is better)
Translates to: LAQADFFVLHRQCPGTTLFSCHI*LGSSYL
Trigger: CAAATAAGAGGAGCCTAACAAGATGTGACAACTAAA...TAAAGTGGTCCCAGGGCACTGTCTGTGCAAGACAAAGAAATCGGCTTGGGCTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR CAA 90 bp AAAGTTGGGACCTCAAGAAGTCTACTTCTTCGGTCATGCCATTCACACAGAAGGTTTGGTGCCTCGATATaGCCACTTTACATCATCATG +
Preference number: 5 (lower is better)
Translates to: KVGTSRSLLLRSCHSHRRFGASI*PLYIIM
Trigger: CATGATGATGTAAAGTGGCAATATCGAGGCACCAAA...CCTTCTGTGTGAATGGCATGACCGAAGAAGTAGACTTCTTGAGGTCCCAACTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
CDS-3UTR CAA 90 bp GAAAAATGCCAGCCAGAAATACCACAGGGTGTTGATGGCAGGCAAAGTCAAGAAGATGTCCTATGTCCTTaGACCTTCCCTTGTGTAATA +
Preference number: 5 (lower is better)
Translates to: EKCQPEIPQGVDGRQSQEDVLCP*TFPCVI
Trigger: TATTACACAAGGGAAGGTCAAAGGACATAGGACATC...TTCTTGACTTTGCCTGCCATCAACACCCTGTGGTATTTCTGGCTGGCATTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
CDS-3UTR CAA 90 bp CATGCAGAGAAAAATGCCAGCCAGAAATACCACAGGGTGTTGATGGCAGGCAAAAATTCTGAGGTCAGCTaGAAAAGCTTACACACATTC +
Preference number: 5 (lower is better)
Translates to: HAEKNASQKYHRVLMAGKNSEVS*KSLHTF
Trigger: GAATGTGTGTAAGCTTTTCAAGCTGACCTCAGAATT...TTTGCCTGCCATCAACACCCTGTGGTATTTCTGGCTGGCATTTTTCTCTGCATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
CDS-3UTR CAA 90 bp CAGACGTCAGTACTCCCCTGTGCCATAGATGTTCCACATGAACCTCCAGGAAATCTTCTACCACCAGACTaGCTTTCAGTTACTTTATTT +
Preference number: 5 (lower is better)
Translates to: QTSVLPCAIDVPHEPPGNLLPPD*LSVTLF
Trigger: AAATAAAGTAACTGAAAGCAAGTCTGGTGGTAGAAG...ATTTCCTGGAGGTTCATGTGGAACATCTATGGCACAGGGGAGTACTGACGTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556639.5
CDS-3UTR CAA 90 bp TCATTAGTAGAGTCGAGTCTGCTGACATTACAATCTATTGATCTCCCCAGAGTTGAATCCACTTCTATCTaGGAGGGCTTGTACCCAAAC +
Preference number: 5 (lower is better)
Translates to: SLVESSLLTLQSIDLPRVESTSI*EGLYPN
Trigger: GTTTGGGTACAAGCCCTCCAAGATAGAAGTGGATTC...AACTCTGGGGAGATCAATAGATTGTAATGTCAGCAGACTCGACTCTACTAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316738.12
ENST00000555872.5
ENST00000556609.5
ENST00000557685.5
CDS-3UTR CAA 90 bp CCTCAAGAAGTCTACTTCTTCGGTCATGCCATTCACACAGAAGGTATAGCTGATTTCGTTCCGATATCGTaGAGCTTCCTTCTTTTTCCT +
Preference number: 5 (lower is better)
Translates to: PQEVYFFGHAIHTEGIADFVPIS*SFLLFP
Trigger: AGGAAAAAGAAGGAAGCTCAACGATATCGGAACGAA...ATCAGCTATACCTTCTGTGTGAATGGCATGACCGAAGAAGTAGACTTCTTGAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
CDS-3UTR CAA 90 bp AGTCTGCTGACATTACAATCTATTGATCTCCCCAGAGTTACCAAAAGTAGTTCAGTCCTTTCCGGTAATTaGGGAGCCACCTGCCTAAAT +
Preference number: 5 (lower is better)
Translates to: SLLTLQSIDLPRVTKSSSVLSGN*GATCLN
Trigger: ATTTAGGCAGGTGGCTCCCAAATTACCGGAAAGGAC...TGAACTACTTTTGGTAACTCTGGGGAGATCAATAGATTGTAATGTCAGCAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316738.12
ENST00000555872.5
ENST00000556609.5
ENST00000557685.5
CDS-3UTR CAA 90 bp AGGAGAGTTAGATGTCCTATGTCCTTTGACCTTCCCTTGTGTAATATGAAGAAAGTCCTTTCCGGTAATTaGGGAGCCACCTGCCTAAAT +
Preference number: 5 (lower is better)
Translates to: RRVRCPMSFDLPLCNMKKVLSGN*GATCLN
Trigger: ATTTAGGCAGGTGGCTCCCAAATTACCGGAAAGGAC...TTTCTTCATATTACACAAGGGAAGGTCAAAGGACATAGGACATCTAACTCTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
CDS-3UTR CAA 90 bp CTGCTGACATTACAATCTATTGATCTCCCCAGAGTTACCAAAAGTAGTTCACAAGTCCTTTCCGGTAATTaGGGAGCCACCTGCCTAAAT +
Preference number: 5 (lower is better)
Translates to: LLTLQSIDLPRVTKSSSQVLSGN*GATCLN
Trigger: ATTTAGGCAGGTGGCTCCCAAATTACCGGAAAGGAC...TTGTGAACTACTTTTGGTAACTCTGGGGAGATCAATAGATTGTAATGTCAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316738.12
ENST00000555872.5
ENST00000556609.5
ENST00000557685.5
CDS-3UTR CAA 90 bp GGTGTTGATGGCAGGCAAAGTCAAGAAAGAACTTTAAGTCAGCTTCCTGATGACGATGTCCTATGTCCTTaGACCTTCCCTTGTGTAATA +
Preference number: 5 (lower is better)
Translates to: GVDGRQSQERTLSQLPDDDVLCP*TFPCVI
Trigger: TATTACACAAGGGAAGGTCAAAGGACATAGGACATC...GTCATCAGGAAGCTGACTTAAAGTTCTTTCTTGACTTTGCCTGCCATCAACACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
CDS-3UTR CAA 90 bp CATGAAATAAAAGTTGGGACCTCAAGAAGTCTACTTCTTCGGTCATGCCATTCAATGATACTCCACAAGTaGGCTGCTGGCAGAAAGGAA +
Preference number: 5 (lower is better)
Translates to: HEIKVGTSRSLLLRSCHSMILHK*AAGRKE
Trigger: TTCCTTTCTGCCAGCAGCCAACTTGTGGAGTATCAT...TGAATGGCATGACCGAAGAAGTAGACTTCTTGAGGTCCCAACTTTTATTTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
CDS-3UTR CAA 90 bp GGTGTTGATGGCAGGCAAAGTCAAGAAAGAACTTTAAGTCAGCTTCCTGATGACAATTCTGAGGTCAGCTaGAAAAGCTTACACACATTC +
Preference number: 5 (lower is better)
Translates to: GVDGRQSQERTLSQLPDDNSEVS*KSLHTF
Trigger: GAATGTGTGTAAGCTTTTCAAGCTGACCTCAGAATT...GTCATCAGGAAGCTGACTTAAAGTTCTTTCTTGACTTTGCCTGCCATCAACACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
CDS-3UTR CAA 90 bp AGTCTGCTGACATTACAATCTATTGATCTCCCCAGAGTTACCAAAAGTAGTTCATCTATCTTGGAGGGCTaGTACCCAAACAGCATTACA +
Preference number: 5 (lower is better)
Translates to: SLLTLQSIDLPRVTKSSSSILEG*YPNSIT
Trigger: TGTAATGCTGTTTGGGTACAAGCCCTCCAAGATAGA...TGAACTACTTTTGGTAACTCTGGGGAGATCAATAGATTGTAATGTCAGCAGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316738.12
ENST00000555872.5
ENST00000556609.5
ENST00000557685.5
CDS-3UTR CAA 90 bp CTGCTGACATTACAATCTATTGATCTCCCCAGAGTTACCAAAAGTAGTTCACAATCTATCTTGGAGGGCTaGTACCCAAACAGCATTACA +
Preference number: 5 (lower is better)
Translates to: LLTLQSIDLPRVTKSSSQSILEG*YPNSIT
Trigger: TGTAATGCTGTTTGGGTACAAGCCCTCCAAGATAGA...TTGTGAACTACTTTTGGTAACTCTGGGGAGATCAATAGATTGTAATGTCAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000316738.12
ENST00000555872.5
ENST00000556609.5
ENST00000557685.5
CDS-3UTR CAA 90 bp GTCTGTAGCATGACATCATTAGTAGAGTCGAGTCTGCTGACATTACAATCTATTTCTATCTTGGAGGGCTaGTACCCAAACAGCATTACA +
Preference number: 5 (lower is better)
Translates to: VCSMTSLVESSLLTLQSISILEG*YPNSIT
Trigger: TGTAATGCTGTTTGGGTACAAGCCCTCCAAGATAGA...AATAGATTGTAATGTCAGCAGACTCGACTCTACTAATGATGTCATGCTACAGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316738.12
ENST00000555872.5
ENST00000556609.5
ENST00000557685.5
CDS-3UTR CAA 90 bp ACATCATTAGTAGAGTCGAGTCTGCTGACATTACAATCTATTGATCTCCCCAGATTCGTTCCGATATCGTaGAGCTTCCTTCTTTTTCCT +
Preference number: 5 (lower is better)
Translates to: TSLVESSLLTLQSIDLPRFVPIS*SFLLFP
Trigger: AGGAAAAAGAAGGAAGCTCAACGATATCGGAACGAA...TCTGGGGAGATCAATAGATTGTAATGTCAGCAGACTCGACTCTACTAATGATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000316738.12
ENST00000555872.5
ENST00000556609.5
ENST00000557685.5
CDS-3UTR CAA 90 bp TGTAGCATGACATCATTAGTAGAGTCGAGTCTGCTGACATTACAATCTATTGATCCAGCATTGCTGTTCTaGCTCCAGTATAGCAGTTAC +
Preference number: 5 (lower is better)
Translates to: CSMTSLVESSLLTLQSIDPALLF*LQYSSY
Trigger: GTAACTGCTATACTGGAGCAAGAACAGCAATGCTGG...ATCAATAGATTGTAATGTCAGCAGACTCGACTCTACTAATGATGTCATGCTACA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS GCA 90 bp CAAGTTAAATACAATGCTTCACAGGCTGACTCTTTTCAGCTGACCTaGTTTGTAATTCCAACTGAAATGATTACAGGTAAACAGGAGAGC +
Preference number: 5 (lower is better)
Translates to: QVKYNASQADSFQLT*FVIPTEMITGKQES
Trigger: GCTCTCCTGTTTACCTGTAATCATTTCAGTTGGAATTACAAAGCAGGTCAGCTGAAAAGAGTCAGCCTGTGAAGCATTGTATTTAACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553871.5
ENST00000554761.5
ENST00000555430.1
CDS-3UTR CAA 90 bp ACATCATTAGTAGAGTCGAGTCTGCTGACATTACAATCTATTGATCTCCCCAGACTTTACAGTGATGATTaGGACTCAGGGACATTATCT +
Preference number: 5 (lower is better)
Translates to: TSLVESSLLTLQSIDLPRLYSDD*DSGTLS
Trigger: AGATAATGTCCCTGAGTCCAAATCATCACTGTAAAG...TCTGGGGAGATCAATAGATTGTAATGTCAGCAGACTCGACTCTACTAATGATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000316738.12
ENST00000555872.5
CDS-3UTR CAA 90 bp TGTTTTTATGGATGTTTCTATACCTGGAAGCAGGCAGATACTCAAAGACCAATATTCGTTCCGATATCGTaGAGCTTCCTTCTTTTTCCT +
Preference number: 5 (lower is better)
Translates to: CFYGCFYTWKQADTQRPIFVPIS*SFLLFP
Trigger: AGGAAAAAGAAGGAAGCTCAACGATATCGGAACGAA...TATTGGTCTTTGAGTATCTGCCTGCTTCCAGGTATAGAAACATCCATAAAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
CDS TCA 90 bp GAAATCCTCTTGAAAATGAAGGAGTCTAGCATCTGGCTATCACAGTaGGCTCAACTTAGAAACTGCAATAAACCAGAAGTATTTGGATTT +
Preference number: 5 (lower is better)
Translates to: EILLKMKESSIWLSQ*AQLRNCNKPEVFGF
Trigger: AAATCCAAATACTTCTGGTTTATTGCAGTTTCTAAGTTGAGCTCACTGTGATAGCCAGATGCTAGACTCCTTCATTTTCAAGAGGATTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555430.1
CDS-3UTR CAA 90 bp TGTAAGACTCTTCCAATCAGCATAACAGAAGAGCCTATTTGTTTTACCCAAGCTGTGATCTTACTGAAGTaGCATGATCATACACAGAAT +
Preference number: 5 (lower is better)
Translates to: CKTLPISITEEPICFTQAVILLK*HDHTQN
Trigger: ATTCTGTGTATGATCATGCAACTTCAGTAAGATCAC...AGCTTGGGTAAAACAAATAGGCTCTTCTGTTATGCTGATTGGAAGAGTCTTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538485.6
ENST00000556005.1
CDS TCA 72 bp CAGGCAGCCCAGGTCTTATCTGCACACCCGGCAGAGTaGGACCCAGACACGGGAGAGGAAGCGAGAGGCCCA +
Preference number: 6 (lower is better)
Translates to: QAAQVLSAHPAE*DPDTGEEARGP
Trigger: TGGGCCTCTCGCTTCCTCTCCCGTGTCTGGGTCTCACTCTGCCGGGTGTGCAGATAAGACCTGGGCTGCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555872.5
CDS CCA 72 bp CCGAGGGACTGGCTTCCCACGTCCGCGACCTGGCTCTaGCCTCGGAGAAGAACATCGCGACTACAACAACCG +
Preference number: 6 (lower is better)
Translates to: PRDWLPTSATWL*PRRRTSRLQQP
Trigger: CGGTTGTTGTAGTCGCGATGTTCTTCTCCGAGGCCAGAGCCAGGTCGCGGACGTGGGAAGCCAGTCCCTCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316738.12
ENST00000538485.6
ENST00000555608.5
ENST00000556639.5
CDS GCA 72 bp ACCACGACCCTTTGGACAGGCAGCCCAGGTCTTATCTaGACACCCGGCAGAGTGAGACCCAGACACGGGAGA +
Preference number: 6 (lower is better)
Translates to: TTTLWTGSPGLI*TPGRVRPRHGR
Trigger: TCTCCCGTGTCTGGGTCTCACTCTGCCGGGTGTGCAGATAAGACCTGGGCTGCCTGTCCAAAGGGTCGTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000555872.5
CDS CCA 72 bp TGTGTTCCGAGGGACTGGCTTCCCACGTCCGCGACCTaGCTCTGGCCTCGGAGAAGAACATCGCGACTACAA +
Preference number: 6 (lower is better)
Translates to: CVPRDWLPTSAT*LWPRRRTSRLQ
Trigger: TTGTAGTCGCGATGTTCTTCTCCGAGGCCAGAGCCAGGTCGCGGACGTGGGAAGCCAGTCCCTCGGAACACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316738.12
ENST00000538485.6
ENST00000555608.5
ENST00000556639.5
CDS CAA 90 bp GCCAGGAGCCCTGCAGCTCCAGGATCAGTCATTAACCACGACCCTTaGGACAGGCAGCCCAGGTCTTATCTGCACACCCGGCAGAGTGAG +
Preference number: 6 (lower is better)
Translates to: ARSPAAPGSVINHDP*DRQPRSYLHTRQSE
Trigger: CTCACTCTGCCGGGTGTGCAGATAAGACCTGGGCTGCCTGTCCAAAGGGTCGTGGTTAATGACTGATCCTGGAGCTGCAGGGCTCCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555872.5
ENST00000556005.1
CDS CCA 72 bp CTGCAGCTCCAGGATCAGTCATTAACCACGACCCTTTaGACAGGCAGCCCAGGTCTTATCTGCACACCCGGC +
Preference number: 6 (lower is better)
Translates to: LQLQDQSLTTTL*TGSPGLICTPG
Trigger: GCCGGGTGTGCAGATAAGACCTGGGCTGCCTGTCCAAAGGGTCGTGGTTAATGACTGATCCTGGAGCTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000555872.5
ENST00000556005.1
CDS GCA 72 bp ATGCAGGAGGATCACTTGAACGCGGAAGGTGGGGGTTaGTATGAGTCGAGATGGCACCATTGCACTCCAGCC +
Preference number: 6 (lower is better)
Translates to: MQEDHLNAEGGG*YESRWHHCTPA
Trigger: GGCTGGAGTGCAATGGTGCCATCTCGACTCATAGCAACCCCCACCTTCCGCGTTCAAGTGATCCTCCTGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550103.2
CDS CCA 72 bp CCTGCCCCTACTCATAAGTGCTTGTATGCACCTGCCTaGTGTGCAAGCGCTCCCCCAACTTTACAGTTCACT +
Preference number: 6 (lower is better)
Translates to: PAPTHKCLYAPA*CASAPPTLQFT
Trigger: AGTGAACTGTAAAGTTGGGGGAGCGCTTGCACACCAGGCAGGTGCATACAAGCACTTATGAGTAGGGGCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000554761.5
CDS CAA 72 bp GAAGGTGACATTACTGAAAAGATGGGCAGAAATGTCTaGAGAGCCTGCATAAGTCAGCTCCAGCACGGCACT +
Preference number: 6 (lower is better)
Translates to: EGDITEKMGRNV*RACISQLQHGT
Trigger: AGTGCCGTGCTGGAGCTGACTTATGCAGGCTCTCAAGACATTTCTGCCCATCTTTTCAGTAATGTCACCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550103.2
CDS CAA 90 bp TCAAGCTATGAAGGTGACATTACTGAAAAGATGGGCAGAAATGTCTaGAGAGCCTGCATAAGTCAGCTCCAGCACGGCACTGGATCCAGT +
Preference number: 6 (lower is better)
Translates to: SSYEGDITEKMGRNV*RACISQLQHGTGSS
Trigger: ACTGGATCCAGTGCCGTGCTGGAGCTGACTTATGCAGGCTCTCAAGACATTTCTGCCCATCTTTTCAGTAATGTCACCTTCATAGCTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550103.2
CDS CCA 72 bp CCACACTCAAATCACTGTGACAGAGAAGATGTACCGTaGGTAGAATTAGTGACTGGAATGAGATGGAGAAGG +
Preference number: 6 (lower is better)
Translates to: PHSNHCDREDVP*VELVTGMRWRR
Trigger: CCTTCTCCATCTCATTCCAGTCACTAATTCTACCCACGGTACATCTTCTCTGTCACAGTGATTTGAGTGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000556078.1
CDS CAA 72 bp CTAAGCTTCAGGGTCAGTGCACACAGAGAAATCCTCTaGAAAATGAAGGAGTCTAGCATCTGGCTATCACAG +
Preference number: 6 (lower is better)
Translates to: LSFRVSAHREIL*KMKESSIWLSQ
Trigger: CTGTGATAGCCAGATGCTAGACTCCTTCATTTTCAAGAGGATTTCTCTGTGTGCACTGACCCTGAAGCTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555430.1
CDS TCA 72 bp GCAGTTTTAAAGTCCTCTCTGCTGAGATATCCTTTGTaGTCTTCATCACATGCTTTAAATACCGCGGCCACG +
Preference number: 6 (lower is better)
Translates to: AVLKSSLLRYPL*SSSHALNTAAT
Trigger: CGTGGCCGCGGTATTTAAAGCATGTGATGAAGATCACAAAGGATATCTCAGCAGAGAGGACTTTAAAACTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000556609.5
CDS TCA 72 bp GGCATATTCAAAGTCTCTAAAGCTGACGTGACCATCTaGATCTCGATCTACTTCCCTGAATACCTCAAGAAC +
Preference number: 6 (lower is better)
Translates to: GIFKVSKADVTI*ISIYFPEYLKN
Trigger: GTTCTTGAGGTATTCAGGGAAGTAGATCGAGATTCAGATGGTCACGTCAGCTTTAGAGACTTTGAATATGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000316738.12
ENST00000553871.5
ENST00000555872.5
ENST00000556609.5
CDS TCA 72 bp GCAGTTTTAAAGTCCTCTCTGCTGAGATATCCTTTGTaGTCTTCATCACATGCTTTAAATACTTCCACCCAC +
Preference number: 6 (lower is better)
Translates to: AVLKSSLLRYPL*SSSHALNTSTH
Trigger: GTGGGTGGAAGTATTTAAAGCATGTGATGAAGATCACAAAGGATATCTCAGCAGAGAGGACTTTAAAACTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000316738.12
ENST00000538485.6
ENST00000555608.5
ENST00000556639.5
CDS TCA 72 bp TTGAAAATGAAGGAGTCTAGCATCTGGCTATCACAGTaGGCTCAACTTAGAAACTGCAATAAACCAGAAGTA +
Preference number: 6 (lower is better)
Translates to: LKMKESSIWLSQ*AQLRNCNKPEV
Trigger: TACTTCTGGTTTATTGCAGTTTCTAAGTTGAGCTCACTGTGATAGCCAGATGCTAGACTCCTTCATTTTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000555430.1
CDS GCA 72 bp TACAATGCTTCACAGGCTGACTCTTTTCAGCTGACCTaGTTTGTAATTCCAACTGAAATGATTACAGGTAAA +
Preference number: 6 (lower is better)
Translates to: YNASQADSFQLT*FVIPTEMITGK
Trigger: TTTACCTGTAATCATTTCAGTTGGAATTACAAAGCAGGTCAGCTGAAAAGAGTCAGCCTGTGAAGCATTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000553871.5
ENST00000554761.5
ENST00000555430.1
CDS GCA 72 bp AACTATAGATTTCCCTCCTGGACCATGACACTATGCTaGAAGAGAAAAATGTTCCAGACTCAAAAATCAGAA +
Preference number: 6 (lower is better)
Translates to: NYRFPSWTMTLC*KRKMFQTQKSE
Trigger: TTCTGATTTTTGAGTCTGGAACATTTTTCTCTTGCAGCATAGTGTCATGGTCCAGGAGGGAAATCTATAGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000554761.5
CDS CAA 72 bp CAAATGGTAAATCAAAAGGTGGTGTACAGAAGGATTTaGATGCCTTACCTGAATACCTCAAGAACAGTCCTT +
Preference number: 6 (lower is better)
Translates to: QMVNQKVVYRRI*MPYLNTSRTVL
Trigger: AAGGACTGTTCTTGAGGTATTCAGGTAAGGCATCAAAATCCTTCTGTACACCACCTTTTGATTTACCATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000554761.5