RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EEFSEC (Homo sapiens)

Ensembl gene IDs: ENSG00000132394, ENSG00000284869

Ensembl transcript IDs: ENST00000254730.11, ENST00000483457.1, ENST00000483569.1, ENST00000484438.1, ENST00000644579.2, ENST00000644955.1, ENST00000645384.1, ENST00000646013.1

Found 553 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTaGCCATGGCCCTTTCCTAGTTGGGCTGGGGGCTGTCCTGGGTGG +
Preference number: 1 (lower is better)
Translates to: VANRWGSGRYWLPAL*PWPFPSWAGGCPGW
Trigger: CCACCCAGGACAGCCCCCAGCCCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
3UTR CCA 90 bp GAGACTGGCCTGCAGGTGGCCAACAGATGGGGCAGTGGAAGATACTaGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGGCTGGG +
Preference number: 1 (lower is better)
Translates to: ETGLQVANRWGSGRY*LPALCPWPFPSWAG
Trigger: CCCAGCCCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACCTGCAGGCCAGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
3UTR CCA 90 bp TCAAGTGCCTGCCCACCTGGGGGAGGGTTGAGACTGGCCTGCAGGTaGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCT +
Preference number: 1 (lower is better)
Translates to: SSACPPGGGLRLACR*PTDGAVEDTGYQPS
Trigger: AGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACCTGCAGGCCAGTCTCAACCCTCCCCCAGGTGGGCAGGCACTTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
3UTR CCA 90 bp AACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATaGCCCTTTCCTAGTTGGGCTGGGGGCTGTCCTGGGTGGGAGTGT +
Preference number: 1 (lower is better)
Translates to: NRWGSGRYWLPALCP*PFPSWAGGCPGWEC
Trigger: ACACTCCCACCCAGGACAGCCCCCAGCCCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
3UTR-3UTR TCA 90 bp GGCTGGAGGAGAGACCCTCCTGGCCCCAGCAACCCATCCCCCTCAGCTCCTCACGAGCACCACATGCTGTaGGGGCTCGCTCCGCTCGGC +
Preference number: 2 (lower is better)
Translates to: GWRRDPPGPSNPSPSAPHEHHML*GLAPLG
Trigger: GCCGAGCGGAGCGAGCCCTCACAGCATGTGGTGCTC...GTGAGGAGCTGAGGGGGATGGGTTGCTGGGGCCAGGAGGGTCTCTCCTCCAGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000483457.1
ENST00000644955.1
3UTR-3UTR CCA 90 bp GGCTGGAGGAGAGACCCTCCTGGCCCCAGCAACCCATCCCCCTCAGCTCCTCACCACAGCAGCCTGGACTaGGCTGGGCAAGGAGGCCCT +
Preference number: 2 (lower is better)
Translates to: GWRRDPPGPSNPSPSAPHHSSLD*AGQGGP
Trigger: AGGGCCTCCTTGCCCAGCCCAGTCCAGGCTGCTGTG...GTGAGGAGCTGAGGGGGATGGGTTGCTGGGGCCAGGAGGGTCTCTCCTCCAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
3UTR-3UTR CCA 90 bp GGGCTGGAGGAGAGACCCTCCTGGCCCCAGCAACCCATCCCCCTCAGCTCCTCATGGCCCTTTCCTAGTTaGGCTGGGGGCTGTCCTGGG +
Preference number: 2 (lower is better)
Translates to: GLEERPSWPQQPIPLSSSWPFPS*AGGCPG
Trigger: CCCAGGACAGCCCCCAGCCCAACTAGGAAAGGGCCA...TGAGGAGCTGAGGGGGATGGGTTGCTGGGGCCAGGAGGGTCTCTCCTCCAGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
3UTR-3UTR TCA 90 bp GGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCGAGCACCACATGCTGTaGGGGCTCGCTCCGCTCGGC +
Preference number: 2 (lower is better)
Translates to: GQQMGQWKILATSPLPMAEHHML*GLAPLG
Trigger: GCCGAGCGGAGCGAGCCCTCACAGCATGTGGTGCTC...GGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000483457.1
ENST00000644955.1
3UTR-3UTR GCA 90 bp GGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGGCTGGGTCGGCGCTCTCCTCCTaGCTGGTGGCCTCCCCACGG +
Preference number: 2 (lower is better)
Translates to: GRYWLPALCPWPFPSWAGSALSS*LVASPR
Trigger: CCGTGGGGAGGCCACCAGGCAGGAGGAGAGCGCCGA...CCCAGCCCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483457.1
ENST00000644955.1
3UTR-3UTR GCA 90 bp AGGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATTCGGCGCTCTCCTCCTaGCTGGTGGCCTCCCCACGG +
Preference number: 2 (lower is better)
Translates to: RWPTDGAVEDTGYQPSAHSALSS*LVASPR
Trigger: CCGTGGGGAGGCCACCAGGCAGGAGGAGAGCGCCGA...ATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000483457.1
ENST00000644955.1
3UTR-3UTR CCA 90 bp GGCTGGAGGAGAGACCCTCCTGGCCCCAGCAACCCATCCCCCTCAGCTCCTCACTGGCTGGTTGGGATTTaGCACAGCAGCCTGGACTGG +
Preference number: 2 (lower is better)
Translates to: GWRRDPPGPSNPSPSAPHWLVGI*HSSLDW
Trigger: CCAGTCCAGGCTGCTGTGCCAAATCCCAACCAGCCA...GTGAGGAGCTGAGGGGGATGGGTTGCTGGGGCCAGGAGGGTCTCTCCTCCAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
3UTR-3UTR GCA 90 bp GGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCAGGCTGAGCACCACATaGTGTGAGGGCTCGCTCCGC +
Preference number: 2 (lower is better)
Translates to: GQQMGQWKILATSPLPMARLSTT*CEGSLR
Trigger: GCGGAGCGAGCCCTCACAGCATGTGGTGCTCAGCCT...GGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483457.1
ENST00000644955.1
3UTR-3UTR CCA 90 bp GGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGGCTGGGCACAGCAGCCTGGACTaGGCTGGGCAAGGAGGCCCT +
Preference number: 2 (lower is better)
Translates to: GRYWLPALCPWPFPSWAGHSSLD*AGQGGP
Trigger: AGGGCCTCCTTGCCCAGCCCAGTCCAGGCTGCTGTG...CCCAGCCCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
3UTR-3UTR CCA 90 bp TGCAGGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCACAGCAGCCTGGACTaGGCTGGGCAAGGAGGCCCT +
Preference number: 2 (lower is better)
Translates to: CRWPTDGAVEDTGYQPSAHSSLD*AGQGGP
Trigger: AGGGCCTCCTTGCCCAGCCCAGTCCAGGCTGCTGTG...GGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
3UTR-3UTR CCA 90 bp GGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCTCAGCACCAAGCTTaGGGGTGGGGGCTGCTGCTG +
Preference number: 2 (lower is better)
Translates to: GGQQMGQWKILATSPLPMAQHQA*GWGLLL
Trigger: CAGCAGCAGCCCCCACCCCCAAGCTTGGTGCTGAGC...CATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
3UTR-3UTR CCA 90 bp TGCAGGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCGGAGTGTGCAGGGGCTaGAGGAGAGACCCTCCTGGC +
Preference number: 2 (lower is better)
Translates to: CRWPTDGAVEDTGYQPSAGVCRG*RRDPPG
Trigger: GCCAGGAGGGTCTCTCCTCCAGCCCCTGCACACTCC...GGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACCTGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
3UTR-3UTR CCA 90 bp GGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGGCTGGGGGAGTGTGCAGGGGCTaGAGGAGAGACCCTCCTGGC +
Preference number: 2 (lower is better)
Translates to: GRYWLPALCPWPFPSWAGGVCRG*RRDPPG
Trigger: GCCAGGAGGGTCTCTCCTCCAGCCCCTGCACACTCC...CCCAGCCCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
3UTR-3UTR CCA 90 bp GGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGCACAGCAGCCTGGACTaGGCTGGGCAAGGAGGCCCT +
Preference number: 2 (lower is better)
Translates to: GSGRYWLPALCPWPFPSWHSSLD*AGQGGP
Trigger: AGGGCCTCCTTGCCCAGCCCAGTCCAGGCTGCTGTG...CCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
3UTR-3UTR CCA 90 bp TGGGCTGGGGCCACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGCTCAGCACCAAGCTTaGGGGTGGGGGCTGCTGCTG +
Preference number: 2 (lower is better)
Translates to: WAGATGHLFVAIKCLPTWAQHQA*GWGLLL
Trigger: CAGCAGCAGCCCCCACCCCCAAGCTTGGTGCTGAGC...CCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGTGGCCCCAGCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
3UTR-3UTR CCA 90 bp GGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGGCTCAGCACCAAGCTTaGGGGTGGGGGCTGCTGCTG +
Preference number: 2 (lower is better)
Translates to: GSGRYWLPALCPWPFPSWAQHQA*GWGLLL
Trigger: CAGCAGCAGCCCCCACCCCCAAGCTTGGTGCTGAGC...CCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
3UTR-3UTR CCA 90 bp AGGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGAGTGTGCAGGGGCTaGAGGAGAGACCCTCCTGGC +
Preference number: 2 (lower is better)
Translates to: RWPTDGAVEDTGYQPSAHGVCRG*RRDPPG
Trigger: GCCAGGAGGGTCTCTCCTCCAGCCCCTGCACACTCC...ATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
3UTR-3UTR CCA 90 bp TGCAGGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCTGGCCCTTTCCTAGTTaGGCTGGGGGCTGTCCTGGG +
Preference number: 2 (lower is better)
Translates to: CRWPTDGAVEDTGYQPSAWPFPS*AGGCPG
Trigger: CCCAGGACAGCCCCCAGCCCAACTAGGAAAGGGCCA...GGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACCTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
3UTR-3UTR CCA 90 bp GGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCAGACTGGCCTGCAGGTaGCCAACAGATGGGGCAGTG +
Preference number: 2 (lower is better)
Translates to: GQQMGQWKILATSPLPMARLACR*PTDGAV
Trigger: CACTGCCCCATCTGTTGGCCACCTGCAGGCCAGTCT...GGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
3UTR-3UTR GCA 90 bp GGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGGCTGGGGGGTTGAGACTGGCCTaGAGGTGGCCAACAGATGGG +
Preference number: 2 (lower is better)
Translates to: GRYWLPALCPWPFPSWAGGLRLA*RWPTDG
Trigger: CCCATCTGTTGGCCACCTGCAGGCCAGTCTCAACCC...CCCAGCCCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
3UTR-3UTR GCA 90 bp GGCTGGGGCCACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGGGTTGAGACTGGCCTaGAGGTGGCCAACAGATGGG +
Preference number: 2 (lower is better)
Translates to: GWGHGTFICSHQVPAHLGGLRLA*RWPTDG
Trigger: CCCATCTGTTGGCCACCTGCAGGCCAGTCTCAACCC...CCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGTGGCCCCAGCC
61% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
3UTR-3UTR GCA 90 bp AGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGGCTGAGCACCACATaGTGTGAGGGCTCGCTCCGC +
Preference number: 2 (lower is better)
Translates to: RWGSGRYWLPALCPWPFPRLSTT*CEGSLR
Trigger: GCGGAGCGAGCCCTCACAGCATGTGGTGCTCAGCCT...AGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483457.1
ENST00000644955.1
3UTR-3UTR CCA 90 bp TGCAGGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCTTTGGCACAGCAGCCTaGACTGGGCTGGGCAAGGAG +
Preference number: 2 (lower is better)
Translates to: CRWPTDGAVEDTGYQPSAFGTAA*TGLGKE
Trigger: CTCCTTGCCCAGCCCAGTCCAGGCTGCTGTGCCAAA...GGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
3UTR-3UTR CCA 90 bp GGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCTGGCTGGTTGGGATTTaGCACAGCAGCCTGGACTGG +
Preference number: 2 (lower is better)
Translates to: GQQMGQWKILATSPLPMAWLVGI*HSSLDW
Trigger: CCAGTCCAGGCTGCTGTGCCAAATCCCAACCAGCCA...GGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
3UTR-3UTR CCA 90 bp GGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGGAGAGGCTGAGGCGTaGCTGGTTGGGATTTGGCAC +
Preference number: 2 (lower is better)
Translates to: GGQQMGQWKILATSPLPMGEAEA*LVGIWH
Trigger: GTGCCAAATCCCAACCAGCCACGCCTCAGCCTCTCC...CATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
3UTR-3UTR CCA 90 bp GCCACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAGGGTTGCTCAGCACCAAGCTTaGGGGTGGGGGCTGCTGCTG +
Preference number: 2 (lower is better)
Translates to: ATGHLFVAIKCLPTWGRVAQHQA*GWGLLL
Trigger: CAGCAGCAGCCCCCACCCCCAAGCTTGGTGCTGAGC...AACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
3UTR-3UTR CCA 90 bp GGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGGCTGGGAGACTGGCCTGCAGGTaGCCAACAGATGGGGCAGTG +
Preference number: 2 (lower is better)
Translates to: GRYWLPALCPWPFPSWAGRLACR*PTDGAV
Trigger: CACTGCCCCATCTGTTGGCCACCTGCAGGCCAGTCT...CCCAGCCCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
3UTR-3UTR CCA 90 bp GGCTGGGGCCACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGAGACTGGCCTGCAGGTaGCCAACAGATGGGGCAGTG +
Preference number: 2 (lower is better)
Translates to: GWGHGTFICSHQVPAHLGRLACR*PTDGAV
Trigger: CACTGCCCCATCTGTTGGCCACCTGCAGGCCAGTCT...CCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGTGGCCCCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
3UTR-3UTR CCA 90 bp GCCACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAGGGTTTGGGCAAGGAGGCCCTaGGGGAGGTCACCGGACACT +
Preference number: 2 (lower is better)
Translates to: ATGHLFVAIKCLPTWGRVWARRP*GRSPDT
Trigger: AGTGTCCGGTGACCTCCCCCAGGGCCTCCTTGCCCA...AACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000483457.1
ENST00000644955.1
3UTR-3UTR GCA 90 bp GGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGGCTGGGTTTGTAGCCATCAAGTaGCTGCCCACCTGGGGGAGG +
Preference number: 2 (lower is better)
Translates to: GRYWLPALCPWPFPSWAGFVAIK*LPTWGR
Trigger: CCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAA...CCCAGCCCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
3UTR-3UTR CCA 90 bp GGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGGCTGGGTGGCTGGTTGGGATTTaGCACAGCAGCCTGGACTGG +
Preference number: 2 (lower is better)
Translates to: GRYWLPALCPWPFPSWAGWLVGI*HSSLDW
Trigger: CCAGTCCAGGCTGCTGTGCCAAATCCCAACCAGCCA...CCCAGCCCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
3UTR-3UTR CCA 90 bp AGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTGGAGAGGCTGAGGCGTaGCTGGTTGGGATTTGGCAC +
Preference number: 2 (lower is better)
Translates to: RWGSGRYWLPALCPWPFPGEAEA*LVGIWH
Trigger: GTGCCAAATCCCAACCAGCCACGCCTCAGCCTCTCC...AGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
3UTR-3UTR CCA 90 bp GCCACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAGGGTTTGGCCCTTTCCTAGTTaGGCTGGGGGCTGTCCTGGG +
Preference number: 2 (lower is better)
Translates to: ATGHLFVAIKCLPTWGRVWPFPS*AGGCPG
Trigger: CCCAGGACAGCCCCCAGCCCAACTAGGAAAGGGCCA...AACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
3UTR-3UTR CCA 90 bp TGCAGGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCGGCAGTGGAAGATACTaGCTACCAGCCCTCTGCCCA +
Preference number: 2 (lower is better)
Translates to: CRWPTDGAVEDTGYQPSAGSGRY*LPALCP
Trigger: TGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCC...GGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
3UTR-3UTR GCA 90 bp GTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGGCTGTGGCTACCAGCCCTCTaGCCATGGCCCTTTCCTAGT +
Preference number: 2 (lower is better)
Translates to: VEDTGYQPSAHGPFLVGLWLPAL*PWPFPS
Trigger: ACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCA...CAGCCCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
3UTR-3UTR CCA 90 bp AGGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATAGGCTGAGGCGTGGCTaGTTGGGATTTGGCACAGCA +
Preference number: 2 (lower is better)
Translates to: RWPTDGAVEDTGYQPSAHRLRRG*LGFGTA
Trigger: TGCTGTGCCAAATCCCAACCAGCCACGCCTCAGCCT...ATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
3UTR-3UTR CCA 90 bp GTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGGCTGAGGCTGAGGCGTGGCTaGTTGGGATTTGGCACAGCA +
Preference number: 2 (lower is better)
Translates to: VEDTGYQPSAHGPFLVGLRLRRG*LGFGTA
Trigger: TGCTGTGCCAAATCCCAACCAGCCACGCCTCAGCCT...CAGCCCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
3UTR-3UTR CCA 90 bp GGCTGGGGCCACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGCAGGTGGCCAACAGATaGGGCAGTGGAAGATACTGG +
Preference number: 2 (lower is better)
Translates to: GWGHGTFICSHQVPAHLGQVANR*GSGRYW
Trigger: CCAGTATCTTCCACTGCCCCATCTGTTGGCCACCTG...CCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGTGGCCCCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
3UTR-3UTR CCA 90 bp TGCAGGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCAGGTGGCCAACAGATaGGGCAGTGGAAGATACTGG +
Preference number: 2 (lower is better)
Translates to: CRWPTDGAVEDTGYQPSAQVANR*GSGRYW
Trigger: CCAGTATCTTCCACTGCCCCATCTGTTGGCCACCTG...GGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
3UTR-3UTR CCA 90 bp GGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGGCTGGGCAGGTGGCCAACAGATaGGGCAGTGGAAGATACTGG +
Preference number: 2 (lower is better)
Translates to: GRYWLPALCPWPFPSWAGQVANR*GSGRYW
Trigger: CCAGTATCTTCCACTGCCCCATCTGTTGGCCACCTG...CCCAGCCCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
3UTR-3UTR TCA 90 bp GCCACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAGGGTTGACACTCAGGGAGACTaGACCATGCGCTTGTGGGTG +
Preference number: 2 (lower is better)
Translates to: ATGHLFVAIKCLPTWGRVDTQGD*TMRLWV
Trigger: CACCCACAAGCGCATGGTTCAGTCTCCCTGAGTGTC...AACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000483457.1
ENST00000644955.1
3UTR-3UTR GCA 90 bp ACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAGGGTTGAGGGGTTGAGACTGGCCTaGAGGTGGCCAACAGATGGG +
Preference number: 2 (lower is better)
Translates to: TGHLFVAIKCLPTWGRVEGLRLA*RWPTDG
Trigger: CCCATCTGTTGGCCACCTGCAGGCCAGTCTCAACCC...CTCAACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
3UTR-3UTR CCA 90 bp GGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGGCTGGGCAACAGATGGGGCAGTaGAAGATACTGGCTACCAGC +
Preference number: 2 (lower is better)
Translates to: GRYWLPALCPWPFPSWAGQQMGQ*KILATS
Trigger: GCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTG...CCCAGCCCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
3UTR-3UTR GCA 90 bp ACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAGGGTTGAGTTTGTAGCCATCAAGTaGCTGCCCACCTGGGGGAGG +
Preference number: 2 (lower is better)
Translates to: TGHLFVAIKCLPTWGRVEFVAIK*LPTWGR
Trigger: CCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAA...CTCAACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
3UTR-3UTR GCA 90 bp ACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCAGGGAGACTGAACCATaGGCTTGTGGGTGTCGAAGA +
Preference number: 2 (lower is better)
Translates to: TDGAVEDTGYQPSAHGPFRETEP*ACGCRR
Trigger: TCTTCGACACCCACAAGCGCATGGTTCAGTCTCCCT...GAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483457.1
ENST00000644955.1
3UTR-3UTR CCA 90 bp ACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAGGGTTGAGAGGCTGAGGCGTGGCTaGTTGGGATTTGGCACAGCA +
Preference number: 2 (lower is better)
Translates to: TGHLFVAIKCLPTWGRVERLRRG*LGFGTA
Trigger: TGCTGTGCCAAATCCCAACCAGCCACGCCTCAGCCT...CTCAACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
3UTR-3UTR CCA 90 bp GGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAGGGTTGAGACTGGAGAGGCTGAGGCGTaGCTGGTTGGGATTTGGCAC +
Preference number: 2 (lower is better)
Translates to: GHLFVAIKCLPTWGRVETGEAEA*LVGIWH
Trigger: GTGCCAAATCCCAACCAGCCACGCCTCAGCCTCTCC...AGTCTCAACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
3UTR-3UTR GCA 90 bp GGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAGGGTTGAGACTTGGCTACCAGCCCTCTaGCCATGGCCCTTTCCTAGT +
Preference number: 2 (lower is better)
Translates to: GHLFVAIKCLPTWGRVETWLPAL*PWPFPS
Trigger: ACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCA...AGTCTCAACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
3UTR-3UTR CCA 90 bp GGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAGGGTTGAGACTGGCAGTGGAAGATACTaGCTACCAGCCCTCTGCCCA +
Preference number: 2 (lower is better)
Translates to: GHLFVAIKCLPTWGRVETGSGRY*LPALCP
Trigger: TGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCC...AGTCTCAACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
3UTR-3UTR CCA 90 bp GCCACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAGGGTTCAACAGATGGGGCAGTaGAAGATACTGGCTACCAGC +
Preference number: 2 (lower is better)
Translates to: ATGHLFVAIKCLPTWGRVQQMGQ*KILATS
Trigger: GCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTG...AACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
3UTR-3UTR CCA 90 bp GGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAGGGTTGAGACTCAGGTGGCCAACAGATaGGGCAGTGGAAGATACTGG +
Preference number: 2 (lower is better)
Translates to: GHLFVAIKCLPTWGRVETQVANR*GSGRYW
Trigger: CCAGTATCTTCCACTGCCCCATCTGTTGGCCACCTG...AGTCTCAACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
3UTR-3UTR CCA 90 bp AGACTGAACCATGCGCTTGTGGGTGTCGAAGACATAACGCTTGAAAGTCAGGCTTGGCTGGTTGGGATTTaGCACAGCAGCCTGGACTGG +
Preference number: 2 (lower is better)
Translates to: RLNHALVGVEDITLESQAWLVGI*HSSLDW
Trigger: CCAGTCCAGGCTGCTGTGCCAAATCCCAACCAGCCA...AGCCTGACTTTCAAGCGTTATGTCTTCGACACCCACAAGCGCATGGTTCAGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483457.1
ENST00000644955.1
3UTR CCA 72 bp GTGAGGGCTCGCTCCGCTCGGCGCTCTCCTCCTGCCTaGTGGCCTCCCCACGGCCAGCCCGGGCCCGCTTCT +
Preference number: 3 (lower is better)
Translates to: VRARSARRSPPA*WPPHGQPGPAS
Trigger: AGAAGCGGGCCCGGGCTGGCCGTGGGGAGGCCACCAGGCAGGAGGAGAGCGCCGAGCGGAGCGAGCCCTCAC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483457.1
ENST00000644955.1
3UTR-3UTR CAA 90 bp GGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGGCTGGGCCACCTGGGGGAGGGTaGAGACTGGCCTGCAGGTGG +
Preference number: 3 (lower is better)
Translates to: GRYWLPALCPWPFPSWAGPPGGG*RLACRW
Trigger: CCACCTGCAGGCCAGTCTCAACCCTCCCCCAGGTGG...CCCAGCCCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
3UTR-3UTR CAA 90 bp GTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGGCTGCCACCTGGGGGAGGGTaGAGACTGGCCTGCAGGTGG +
Preference number: 3 (lower is better)
Translates to: VEDTGYQPSAHGPFLVGLPPGGG*RLACRW
Trigger: CCACCTGCAGGCCAGTCTCAACCCTCCCCCAGGTGG...CAGCCCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
3UTR TCA 72 bp ATAACGCTTGAAAGTCAGGCTGAGCACCACATGCTGTaGGGGCTCGCTCCGCTCGGCGCTCTCCTCCTGCCT +
Preference number: 3 (lower is better)
Translates to: ITLESQAEHHML*GLAPLGALLLP
Trigger: AGGCAGGAGGAGAGCGCCGAGCGGAGCGAGCCCTCACAGCATGTGGTGCTCAGCCTGACTTTCAAGCGTTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483457.1
ENST00000644955.1
3UTR GCA 72 bp GCTGGGGCCACGGGACATTTATTTGTAGCCATCAAGTaGCTGCCCACCTGGGGGAGGGTTGAGACTGGCCTG +
Preference number: 3 (lower is better)
Translates to: AGATGHLFVAIK*LPTWGRVETGL
Trigger: CAGGCCAGTCTCAACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGTGGCCCCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR GCA 90 bp ACCACATGCTGTGAGGGCTCGCTCCGCTCGGCGCTCTCCTCCTGCCTGGTGGCCCCGCGCTCGCGGCTCTaGGGCTGCTTGTCAAAGGCG +
Preference number: 4 (lower is better)
Translates to: TTCCEGSLRSALSSCLVAPRSRL*GCLSKA
Trigger: CGCCTTTGACAAGCAGCCGCAGAGCCGCGAGCGCGG...GGCCACCAGGCAGGAGGAGAGCGCCGAGCGGAGCGAGCCCTCACAGCATGTGGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483457.1
ENST00000644955.1
CDS-3UTR GCA 90 bp GGCTGGAGGAGAGACCCTCCTGGCCCCAGCAACCCATCCCCCTCAGCTCCTCACCGGATGAGGGAGGCGTaGCCGGGGCAGTCGACCAGC +
Preference number: 4 (lower is better)
Translates to: GWRRDPPGPSNPSPSAPHRMREA*PGQSTS
Trigger: GCTGGTCGACTGCCCCGGGCACGCCTCCCTCATCCG...GTGAGGAGCTGAGGGGGATGGGTTGCTGGGGCCAGGAGGGTCTCTCCTCCAGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR GCA 90 bp GGGCTGGAGGAGAGACCCTCCTGGCCCCAGCAACCCATCCCCCTCAGCTCCTCATCGGCGCTCTCCTCCTaGCTGGTGGCCTCCCCACGG +
Preference number: 4 (lower is better)
Translates to: GLEERPSWPQQPIPLSSSSALSS*LVASPR
Trigger: CCGTGGGGAGGCCACCAGGCAGGAGGAGAGCGCCGA...TGAGGAGCTGAGGGGGATGGGTTGCTGGGGCCAGGAGGGTCTCTCCTCCAGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp ACCACATGCTGTGAGGGCTCGCTCCGCTCGGCGCTCTCCTCCTGCCTGGTGGCCTGGCCCTCTGTGGCCTaGCCGGCCTTCTTGTCGGCC +
Preference number: 4 (lower is better)
Translates to: TTCCEGSLRSALSSCLVAWPSVA*PAFLSA
Trigger: GGCCGACAAGAAGGCCGGCCAGGCCACAGAGGGCCA...GGCCACCAGGCAGGAGGAGAGCGCCGAGCGGAGCGAGCCCTCACAGCATGTGGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483457.1
ENST00000644955.1
CDS-3UTR TCA 90 bp GGGCTGGAGGAGAGACCCTCCTGGCCCCAGCAACCCATCCCCCTCAGCTCCTCAGAGCACCACATGCTGTaGGGGCTCGCTCCGCTCGGC +
Preference number: 4 (lower is better)
Translates to: GLEERPSWPQQPIPLSSSEHHML*GLAPLG
Trigger: GCCGAGCGGAGCGAGCCCTCACAGCATGTGGTGCTC...TGAGGAGCTGAGGGGGATGGGTTGCTGGGGCCAGGAGGGTCTCTCCTCCAGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GGGCTGGAGGAGAGACCCTCCTGGCCCCAGCAACCCATCCCCCTCAGCTCCTCACGTGACCTGAAGCAGTaGCTCGCCGGGCTCGGGCTC +
Preference number: 4 (lower is better)
Translates to: GLEERPSWPQQPIPLSSSRDLKQ*LAGLGL
Trigger: GAGCCCGAGCCCGGCGAGCCACTGCTTCAGGTCACG...TGAGGAGCTGAGGGGGATGGGTTGCTGGGGCCAGGAGGGTCTCTCCTCCAGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GGCTGGAGGAGAGACCCTCCTGGCCCCAGCAACCCATCCCCCTCAGCTCCTCACCGTGACCTGAAGCAGTaGCTCGCCGGGCTCGGGCTC +
Preference number: 4 (lower is better)
Translates to: GWRRDPPGPSNPSPSAPHRDLKQ*LAGLGL
Trigger: GAGCCCGAGCCCGGCGAGCCACTGCTTCAGGTCACG...GTGAGGAGCTGAGGGGGATGGGTTGCTGGGGCCAGGAGGGTCTCTCCTCCAGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR TCA 90 bp GGCTGGAGGAGAGACCCTCCTGGCCCCAGCAACCCATCCCCCTCAGCTCCTCACGGCAGTCGACCAGCGTaGCCTGAAGCAGTGGCTCGC +
Preference number: 4 (lower is better)
Translates to: GWRRDPPGPSNPSPSAPHGSRPA*PEAVAR
Trigger: GCGAGCCACTGCTTCAGGTCACGCTGGTCGACTGCC...GTGAGGAGCTGAGGGGGATGGGTTGCTGGGGCCAGGAGGGTCTCTCCTCCAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR GCA 90 bp GGCTGGAGGAGAGACCCTCCTGGCCCCAGCAACCCATCCCCCTCAGCTCCTCACTCGCGGCTCTGCGGCTaGTTGTCAAAGGCGGCGGTG +
Preference number: 4 (lower is better)
Translates to: GWRRDPPGPSNPSPSAPHSRLCG*LSKAAV
Trigger: CACCGCCGCCTTTGACAAGCAGCCGCAGAGCCGCGA...GTGAGGAGCTGAGGGGGATGGGTTGCTGGGGCCAGGAGGGTCTCTCCTCCAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR GCA 90 bp GGGCTGGAGGAGAGACCCTCCTGGCCCCAGCAACCCATCCCCCTCAGCTCCTCAGCCCGTGGAGCAGGATaGCATGGAAGGCTAGCCGGC +
Preference number: 4 (lower is better)
Translates to: GLEERPSWPQQPIPLSSSARGAG*HGRLAG
Trigger: GCCGGCTAGCCTTCCATGGCATCCTGCTCCACGGGC...TGAGGAGCTGAGGGGGATGGGTTGCTGGGGCCAGGAGGGTCTCTCCTCCAGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GGCTGGAGGAGAGACCCTCCTGGCCCCAGCAACCCATCCCCCTCAGCTCCTCACTGCTGCCGAGGACAATaGCCCTCTGTGGCCTGGCCG +
Preference number: 4 (lower is better)
Translates to: GWRRDPPGPSNPSPSAPHCCRGQ*PSVAWP
Trigger: CGGCCAGGCCACAGAGGGCCATTGTCCTCGGCAGCA...GTGAGGAGCTGAGGGGGATGGGTTGCTGGGGCCAGGAGGGTCTCTCCTCCAGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GGGCTGGAGGAGAGACCCTCCTGGCCCCAGCAACCCATCCCCCTCAGCTCCTCACACAGCAGCCTGGACTaGGCTGGGCAAGGAGGCCCT +
Preference number: 4 (lower is better)
Translates to: GLEERPSWPQQPIPLSSSHSSLD*AGQGGP
Trigger: AGGGCCTCCTTGCCCAGCCCAGTCCAGGCTGCTGTG...TGAGGAGCTGAGGGGGATGGGTTGCTGGGGCCAGGAGGGTCTCTCCTCCAGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR GCA 90 bp GGCTGGAGGAGAGACCCTCCTGGCCCCAGCAACCCATCCCCCTCAGCTCCTCACACCAGGGCCCACTGCTaGCGAGGACAATGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: GWRRDPPGPSNPSPSAPHTRAHC*RGQWPS
Trigger: AGAGGGCCATTGTCCTCGGCAGCAGTGGGCCCTGGT...GTGAGGAGCTGAGGGGGATGGGTTGCTGGGGCCAGGAGGGTCTCTCCTCCAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCGGCGGTGGAGGCTGTaGTGCTTAGCGCCCGCGCCA +
Preference number: 4 (lower is better)
Translates to: GQQMGQWKILATSPLPMARRWRL*CLAPAP
Trigger: TGGCGCGGGCGCTAAGCACCACAGCCTCCACCGCCG...GGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp ACCACATGCTGTGAGGGCTCGCTCCGCTCGGCGCTCTCCTCCTGCCTGGTGGCCTGTCAAAGGCGGCGGTaGAGGCTGTGGTGCTTAGCG +
Preference number: 4 (lower is better)
Translates to: TTCCEGSLRSALSSCLVACQRRR*RLWCLA
Trigger: CGCTAAGCACCACAGCCTCCACCGCCGCCTTTGACA...GGCCACCAGGCAGGAGGAGAGCGCCGAGCGGAGCGAGCCCTCACAGCATGTGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483457.1
ENST00000644955.1
CDS-3UTR CCA 90 bp ACCACATGCTGTGAGGGCTCGCTCCGCTCGGCGCTCTCCTCCTGCCTGGTGGCCTGGAGCAGGATGCCATaGAAGGCTAGCCGGCACGTG +
Preference number: 4 (lower is better)
Translates to: TTCCEGSLRSALSSCLVAWSRMP*KASRHV
Trigger: CACGTGCCGGCTAGCCTTCCATGGCATCCTGCTCCA...GGCCACCAGGCAGGAGGAGAGCGCCGAGCGGAGCGAGCCCTCACAGCATGTGGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483457.1
ENST00000644955.1
CDS-3UTR TCA 90 bp GGGCTGGAGGAGAGACCCTCCTGGCCCCAGCAACCCATCCCCCTCAGCTCCTCACGAAGGCACTGTCGATaGTGCCCAGTTCCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: GLEERPSWPQQPIPLSSSRRHCR*CPVPQW
Trigger: CCACTGGGGAACTGGGCATCATCGACAGTGCCTTCG...TGAGGAGCTGAGGGGGATGGGTTGCTGGGGCCAGGAGGGTCTCTCCTCCAGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254730.11
ENST00000644579.2
CDS-3UTR TCA 90 bp GGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCCCGGGCCCGCTTCTTaGGGGCGGGTGTCAGGATCT +
Preference number: 4 (lower is better)
Translates to: GQQMGQWKILATSPLPMAPGPAS*GRVSGS
Trigger: AGATCCTGACACCCGCCCTCAAGAAGCGGGCCCGGG...GGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR GCA 90 bp GGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCGCGCCAGCGCCGTCTTaGCGCTGTCGATGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: GQQMGQWKILATSPLPMAAPAPS*RCRCGP
Trigger: TGGGCCACATCGACAGCGGCAAGACGGCGCTGGCGC...GGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR GCA 90 bp GGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGGCTGGGCGGTGGAGGCTGTGGTaGTTAGCGCCCGCGCCAGCG +
Preference number: 4 (lower is better)
Translates to: GRYWLPALCPWPFPSWAGRWRLW*LAPAPA
Trigger: CGCTGGCGCGGGCGCTAAGCACCACAGCCTCCACCG...CCCAGCCCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR GCA 90 bp GGGCTGGAGGAGAGACCCTCCTGGCCCCAGCAACCCATCCCCCTCAGCTCCTCACCCAGCCGGTCTCCTTaGATGGCTGAAGTGATGGGC +
Preference number: 4 (lower is better)
Translates to: GLEERPSWPQQPIPLSSSPSRSP*MAEVMG
Trigger: GCCCATCACTTCAGCCATGCAAGGAGACCGGCTGGG...TGAGGAGCTGAGGGGGATGGGTTGCTGGGGCCAGGAGGGTCTCTCCTCCAGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR GCA 90 bp GGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGTCGGCGCTCTCCTCCTaGCTGGTGGCCTCCCCACGG +
Preference number: 4 (lower is better)
Translates to: GGQQMGQWKILATSPLPMSALSS*LVASPR
Trigger: CCGTGGGGAGGCCACCAGGCAGGAGGAGAGCGCCGA...CATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR GCA 90 bp ACCACATGCTGTGAGGGCTCGCTCCGCTCGGCGCTCTCCTCCTGCCTGGTGGCCTTTGTAGCCATCAAGTaGCTGCCCACCTGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: TTCCEGSLRSALSSCLVAFVAIK*LPTWGR
Trigger: CCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAA...GGCCACCAGGCAGGAGGAGAGCGCCGAGCGGAGCGAGCCCTCACAGCATGTGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000483457.1
ENST00000644955.1
CDS-3UTR CCA 90 bp GGGCTGGAGGAGAGACCCTCCTGGCCCCAGCAACCCATCCCCCTCAGCTCCTCATGTCAAAGGCGGCGGTaGAGGCTGTGGTGCTTAGCG +
Preference number: 4 (lower is better)
Translates to: GLEERPSWPQQPIPLSSSCQRRR*RLWCLA
Trigger: CGCTAAGCACCACAGCCTCCACCGCCGCCTTTGACA...TGAGGAGCTGAGGGGGATGGGTTGCTGGGGCCAGGAGGGTCTCTCCTCCAGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCTGGCCCTCTGTGGCCTaGCCGGCCTTCTTGTCGGCC +
Preference number: 4 (lower is better)
Translates to: GQQMGQWKILATSPLPMAWPSVA*PAFLSA
Trigger: GGCCGACAAGAAGGCCGGCCAGGCCACAGAGGGCCA...GGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GGGCTGGAGGAGAGACCCTCCTGGCCCCAGCAACCCATCCCCCTCAGCTCCTCAGACAATGGCCCTCTGTaGCCTGGCCGGCCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: GLEERPSWPQQPIPLSSSDNGPL*PGRPSC
Trigger: ACAAGAAGGCCGGCCAGGCCACAGAGGGCCATTGTC...TGAGGAGCTGAGGGGGATGGGTTGCTGGGGCCAGGAGGGTCTCTCCTCCAGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GGGCTGGAGGAGAGACCCTCCTGGCCCCAGCAACCCATCCCCCTCAGCTCCTCAAGACTGGCCTGCAGGTaGCCAACAGATGGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: GLEERPSWPQQPIPLSSSRLACR*PTDGAV
Trigger: CACTGCCCCATCTGTTGGCCACCTGCAGGCCAGTCT...TGAGGAGCTGAGGGGGATGGGTTGCTGGGGCCAGGAGGGTCTCTCCTCCAGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR TCA 90 bp GGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGAGCCCAGATCGAGCGTaGTGCCGCGCTCGCGGCTCT +
Preference number: 4 (lower is better)
Translates to: GGQQMGQWKILATSPLPMSPDRA*CRARGS
Trigger: AGAGCCGCGAGCGCGGCATCACGCTCGATCTGGGCT...CATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR TCA 90 bp GGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGTCGACCAGCGTGACCTaGAGCAGTGGCTCGCCGGGC +
Preference number: 4 (lower is better)
Translates to: GGQQMGQWKILATSPLPMSTSVT*SSGSPG
Trigger: GCCCGGCGAGCCACTGCTTCAGGTCACGCTGGTCGA...CATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR TCA 90 bp GGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCGGCAGTCGACCAGCGTaGCCTGAAGCAGTGGCTCGC +
Preference number: 4 (lower is better)
Translates to: GQQMGQWKILATSPLPMAGSRPA*PEAVAR
Trigger: GCGAGCCACTGCTTCAGGTCACGCTGGTCGACTGCC...GGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR TCA 90 bp GGGCTGGAGGAGAGACCCTCCTGGCCCCAGCAACCCATCCCCCTCAGCTCCTCACACAAGGCATTCCGCTaGCTGGGTCTGCATCCCCTT +
Preference number: 4 (lower is better)
Translates to: GLEERPSWPQQPIPLSSSHKAFR*LGLHPL
Trigger: AAGGGGATGCAGACCCAGTCAGCGGAATGCCTTGTG...TGAGGAGCTGAGGGGGATGGGTTGCTGGGGCCAGGAGGGTCTCTCCTCCAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR TCA 90 bp TGCAGGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCCCGGGCCCGCTTCTTaGGGGCGGGTGTCAGGATCT +
Preference number: 4 (lower is better)
Translates to: CRWPTDGAVEDTGYQPSAPGPAS*GRVSGS
Trigger: AGATCCTGACACCCGCCCTCAAGAAGCGGGCCCGGG...GGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACCTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR GCA 90 bp AGGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATCGGATGAGGGAGGCGTaGCCGGGGCAGTCGACCAGC +
Preference number: 4 (lower is better)
Translates to: RWPTDGAVEDTGYQPSAHRMREA*PGQSTS
Trigger: GCTGGTCGACTGCCCCGGGCACGCCTCCCTCATCCG...ATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR GCA 90 bp GGGCTGGAGGAGAGACCCTCCTGGCCCCAGCAACCCATCCCCCTCAGCTCCTCATCCGCTGACTGGGTCTaGATCCCCTTGGTCACATCG +
Preference number: 4 (lower is better)
Translates to: GLEERPSWPQQPIPLSSSSADWV*IPLVTS
Trigger: CGATGTGACCAAGGGGATGCAGACCCAGTCAGCGGA...TGAGGAGCTGAGGGGGATGGGTTGCTGGGGCCAGGAGGGTCTCTCCTCCAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR GCA 90 bp GGCTGGAGGAGAGACCCTCCTGGCCCCAGCAACCCATCCCCCTCAGCTCCTCACTCCGCTGACTGGGTCTaGATCCCCTTGGTCACATCG +
Preference number: 4 (lower is better)
Translates to: GWRRDPPGPSNPSPSAPHSADWV*IPLVTS
Trigger: CGATGTGACCAAGGGGATGCAGACCCAGTCAGCGGA...GTGAGGAGCTGAGGGGGATGGGTTGCTGGGGCCAGGAGGGTCTCTCCTCCAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR GCA 90 bp GGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGTCGGCGCTCTCCTCCTaGCTGGTGGCCTCCCCACGG +
Preference number: 4 (lower is better)
Translates to: GSGRYWLPALCPWPFPSWSALSS*LVASPR
Trigger: CCGTGGGGAGGCCACCAGGCAGGAGGAGAGCGCCGA...CCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR GCA 90 bp GGCTGGAGGAGAGACCCTCCTGGCCCCAGCAACCCATCCCCCTCAGCTCCTCACTTTGTAGCCATCAAGTaGCTGCCCACCTGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: GWRRDPPGPSNPSPSAPHFVAIK*LPTWGR
Trigger: CCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAA...GTGAGGAGCTGAGGGGGATGGGTTGCTGGGGCCAGGAGGGTCTCTCCTCCAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp TGGGCTGGGGCCACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGCGGCGGTGGAGGCTGTaGTGCTTAGCGCCCGCGCCA +
Preference number: 4 (lower is better)
Translates to: WAGATGHLFVAIKCLPTWRRWRL*CLAPAP
Trigger: TGGCGCGGGCGCTAAGCACCACAGCCTCCACCGCCG...CCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGTGGCCCCAGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GGGCTGGAGGAGAGACCCTCCTGGCCCCAGCAACCCATCCCCCTCAGCTCCTCAAGGCATTCCGCTGACTaGGTCTGCATCCCCTTGGTC +
Preference number: 4 (lower is better)
Translates to: GLEERPSWPQQPIPLSSSRHSAD*VCIPLV
Trigger: GACCAAGGGGATGCAGACCCAGTCAGCGGAATGCCT...TGAGGAGCTGAGGGGGATGGGTTGCTGGGGCCAGGAGGGTCTCTCCTCCAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GGCTGGAGGAGAGACCCTCCTGGCCCCAGCAACCCATCCCCCTCAGCTCCTCACACCACGACCAGCTTCTaGCAGGCAATCTGGCCGATC +
Preference number: 4 (lower is better)
Translates to: GWRRDPPGPSNPSPSAPHTTTSF*QAIWPI
Trigger: GATCGGCCAGATTGCCTGCCAGAAGCTGGTCGTGGT...GTGAGGAGCTGAGGGGGATGGGTTGCTGGGGCCAGGAGGGTCTCTCCTCCAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCTGCTGCCGAGGACAATaGCCCTCTGTGGCCTGGCCG +
Preference number: 4 (lower is better)
Translates to: GQQMGQWKILATSPLPMACCRGQ*PSVAWP
Trigger: CGGCCAGGCCACAGAGGGCCATTGTCCTCGGCAGCA...GGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GGCTGGAGGAGAGACCCTCCTGGCCCCAGCAACCCATCCCCCTCAGCTCCTCACCTGTCCTCTAGCCCGTaGAGCAGGATGCCATGGAAG +
Preference number: 4 (lower is better)
Translates to: GWRRDPPGPSNPSPSAPHLSSSP*SRMPWK
Trigger: CTTCCATGGCATCCTGCTCCACGGGCTAGAGGACAG...GTGAGGAGCTGAGGGGGATGGGTTGCTGGGGCCAGGAGGGTCTCTCCTCCAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GGGCTGGAGGAGAGACCCTCCTGGCCCCAGCAACCCATCCCCCTCAGCTCCTCAAGGCTGAGGCGTGGCTaGTTGGGATTTGGCACAGCA +
Preference number: 4 (lower is better)
Translates to: GLEERPSWPQQPIPLSSSRLRRG*LGFGTA
Trigger: TGCTGTGCCAAATCCCAACCAGCCACGCCTCAGCCT...TGAGGAGCTGAGGGGGATGGGTTGCTGGGGCCAGGAGGGTCTCTCCTCCAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GGCTGGAGGAGAGACCCTCCTGGCCCCAGCAACCCATCCCCCTCAGCTCCTCACAGGCTGAGGCGTGGCTaGTTGGGATTTGGCACAGCA +
Preference number: 4 (lower is better)
Translates to: GWRRDPPGPSNPSPSAPHRLRRG*LGFGTA
Trigger: TGCTGTGCCAAATCCCAACCAGCCACGCCTCAGCCT...GTGAGGAGCTGAGGGGGATGGGTTGCTGGGGCCAGGAGGGTCTCTCCTCCAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCGCTCAGCACCAAGCTTaGGGGTGGGGGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: GQQMGQWKILATSPLPMAAQHQA*GWGLLL
Trigger: CAGCAGCAGCCCCCACCCCCAAGCTTGGTGCTGAGC...GGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR TCA 90 bp GTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGGCTGAGCCCAGATCGAGCGTaGTGCCGCGCTCGCGGCTCT +
Preference number: 4 (lower is better)
Translates to: VEDTGYQPSAHGPFLVGLSPDRA*CRARGS
Trigger: AGAGCCGCGAGCGCGGCATCACGCTCGATCTGGGCT...CAGCCCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR TCA 90 bp TGGGCTGGGGCCACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGAGCCCAGATCGAGCGTaGTGCCGCGCTCGCGGCTCT +
Preference number: 4 (lower is better)
Translates to: WAGATGHLFVAIKCLPTWSPDRA*CRARGS
Trigger: AGAGCCGCGAGCGCGGCATCACGCTCGATCTGGGCT...CCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGTGGCCCCAGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR TCA 90 bp GGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGTCGACCAGCGTGACCTaGAGCAGTGGCTCGCCGGGC +
Preference number: 4 (lower is better)
Translates to: GSGRYWLPALCPWPFPSWSTSVT*SSGSPG
Trigger: GCCCGGCGAGCCACTGCTTCAGGTCACGCTGGTCGA...CCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR TCA 90 bp GGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGGCTGGGGGCAGTCGACCAGCGTaGCCTGAAGCAGTGGCTCGC +
Preference number: 4 (lower is better)
Translates to: GRYWLPALCPWPFPSWAGGSRPA*PEAVAR
Trigger: GCGAGCCACTGCTTCAGGTCACGCTGGTCGACTGCC...CCCAGCCCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR TCA 90 bp GGGCTGGAGGAGAGACCCTCCTGGCCCCAGCAACCCATCCCCCTCAGCTCCTCAACGTCAGGAGCTCAATaGGCTCTGGAATGCCCTGTG +
Preference number: 4 (lower is better)
Translates to: GLEERPSWPQQPIPLSSSTSGAQ*ALECPV
Trigger: CACAGGGCATTCCAGAGCTCATTGAGCTCCTGACGT...TGAGGAGCTGAGGGGGATGGGTTGCTGGGGCCAGGAGGGTCTCTCCTCCAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254730.11
ENST00000644579.2
CDS-3UTR TCA 90 bp GGCTGGAGGAGAGACCCTCCTGGCCCCAGCAACCCATCCCCCTCAGCTCCTCACACATCAACCGGCCCATaGCTGTTTCATGGCCCACTG +
Preference number: 4 (lower is better)
Translates to: GWRRDPPGPSNPSPSAPHTSTGP*LFHGPL
Trigger: CAGTGGGCCATGAAACAGTCATGGGCCGGTTGATGT...GTGAGGAGCTGAGGGGGATGGGTTGCTGGGGCCAGGAGGGTCTCTCCTCCAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR TCA 90 bp GGCTGGGGCCACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGTCTTGGACTCGGGGCTaGGGCCACCCGCTCCACAAG +
Preference number: 4 (lower is better)
Translates to: GWGHGTFICSHQVPAHLGSWTRG*GHPLHK
Trigger: CTTGTGGAGCGGGTGGCCTCAGCCCCGAGTCCAAGA...CCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGTGGCCCCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000483457.1
ENST00000644955.1
CDS-3UTR TCA 90 bp GGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGTCTTGGACTCGGGGCTaGGGCCACCCGCTCCACAAG +
Preference number: 4 (lower is better)
Translates to: GGQQMGQWKILATSPLPMSWTRG*GHPLHK
Trigger: CTTGTGGAGCGGGTGGCCTCAGCCCCGAGTCCAAGA...CATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000483457.1
ENST00000644955.1
CDS-3UTR GCA 90 bp GGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGGCGCCAGCGCCGTCTTaGCGCTGTCGATGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: GSGRYWLPALCPWPFPSWAPAPS*RCRCGP
Trigger: TGGGCCACATCGACAGCGGCAAGACGGCGCTGGCGC...CCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR GCA 90 bp AGGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATCCGCGCTCGCGGCTCTaGGGCTGCTTGTCAAAGGCG +
Preference number: 4 (lower is better)
Translates to: RWPTDGAVEDTGYQPSAHPRSRL*GCLSKA
Trigger: CGCCTTTGACAAGCAGCCGCAGAGCCGCGAGCGCGG...ATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR GCA 90 bp GTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGGCTGCCGCGCTCGCGGCTCTaGGGCTGCTTGTCAAAGGCG +
Preference number: 4 (lower is better)
Translates to: VEDTGYQPSAHGPFLVGLPRSRL*GCLSKA
Trigger: CGCCTTTGACAAGCAGCCGCAGAGCCGCGAGCGCGG...CAGCCCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR GCA 90 bp GGCTGGGGCCACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGCCGCATGGACAGTGTaGAGGGACTCGGGGGCACAC +
Preference number: 4 (lower is better)
Translates to: GWGHGTFICSHQVPAHLGAAWTV*RDSGAH
Trigger: GTGTGCCCCCGAGTCCCTGCACACTGTCCATGCGGC...CCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGTGGCCCCAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR GCA 90 bp TGCAGGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCGCCGCATGGACAGTGTaGAGGGACTCGGGGGCACAC +
Preference number: 4 (lower is better)
Translates to: CRWPTDGAVEDTGYQPSAAAWTV*RDSGAH
Trigger: GTGTGCCCCCGAGTCCCTGCACACTGTCCATGCGGC...GGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACCTGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR GCA 90 bp GGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCGTGGAGCAGGATaGCATGGAAGGCTAGCCGGC +
Preference number: 4 (lower is better)
Translates to: GGQQMGQWKILATSPLPMARGAG*HGRLAG
Trigger: GCCGGCTAGCCTTCCATGGCATCCTGCTCCACGGGC...CATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR GCA 90 bp GGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGGCTGGGGCCCGTGGAGCAGGATaGCATGGAAGGCTAGCCGGC +
Preference number: 4 (lower is better)
Translates to: GRYWLPALCPWPFPSWAGARGAG*HGRLAG
Trigger: GCCGGCTAGCCTTCCATGGCATCCTGCTCCACGGGC...CCCAGCCCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR GCA 90 bp GCCACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAGGGTTTCGGCGCTCTCCTCCTaGCTGGTGGCCTCCCCACGG +
Preference number: 4 (lower is better)
Translates to: ATGHLFVAIKCLPTWGRVSALSS*LVASPR
Trigger: CCGTGGGGAGGCCACCAGGCAGGAGGAGAGCGCCGA...AACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp AGGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATCGTGACCTGAAGCAGTaGCTCGCCGGGCTCGGGCTC +
Preference number: 4 (lower is better)
Translates to: RWPTDGAVEDTGYQPSAHRDLKQ*LAGLGL
Trigger: GAGCCCGAGCCCGGCGAGCCACTGCTTCAGGTCACG...ATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp AGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTCGTGACCTGAAGCAGTaGCTCGCCGGGCTCGGGCTC +
Preference number: 4 (lower is better)
Translates to: RWGSGRYWLPALCPWPFPRDLKQ*LAGLGL
Trigger: GAGCCCGAGCCCGGCGAGCCACTGCTTCAGGTCACG...AGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GGCTGGGGCCACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGTGCTGCCGAGGACAATaGCCCTCTGTGGCCTGGCCG +
Preference number: 4 (lower is better)
Translates to: GWGHGTFICSHQVPAHLGCCRGQ*PSVAWP
Trigger: CGGCCAGGCCACAGAGGGCCATTGTCCTCGGCAGCA...CCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGTGGCCCCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GGGCTGGAGGAGAGACCCTCCTGGCCCCAGCAACCCATCCCCCTCAGCTCCTCATGTCCGCATCTAGCCTaGAGCCAATCACCAGGCACA +
Preference number: 4 (lower is better)
Translates to: GLEERPSWPQQPIPLSSSCPHLA*SQSPGT
Trigger: TGTGCCTGGTGATTGGCTCCAGGCTAGATGCGGACA...TGAGGAGCTGAGGGGGATGGGTTGCTGGGGCCAGGAGGGTCTCTCCTCCAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp ACCACATGCTGTGAGGGCTCGCTCCGCTCGGCGCTCTCCTCCTGCCTGGTGGCCCTAGCCGGCACGTGTTaGTGTGAATGTCCGCATCTA +
Preference number: 4 (lower is better)
Translates to: TTCCEGSLRSALSSCLVALAGTC*CECPHL
Trigger: TAGATGCGGACATTCACACCAACACGTGCCGGCTAG...GGCCACCAGGCAGGAGGAGAGCGCCGAGCGGAGCGAGCCCTCACAGCATGTGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483457.1
ENST00000644955.1
CDS-3UTR CCA 90 bp GGCTGGAGGAGAGACCCTCCTGGCCCCAGCAACCCATCCCCCTCAGCTCCTCACTTGAACTTGCCGCTCTaGCCGAAGGCACTGTCGATG +
Preference number: 4 (lower is better)
Translates to: GWRRDPPGPSNPSPSAPHLNLPL*PKALSM
Trigger: CATCGACAGTGCCTTCGGCCAGAGCGGCAAGTTCAA...GTGAGGAGCTGAGGGGGATGGGTTGCTGGGGCCAGGAGGGTCTCTCCTCCAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254730.11
ENST00000644579.2
CDS-3UTR CCA 90 bp GGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGGCTGGGTGGGCAAGGAGGCCCTaGGGGAGGTCACCGGACACT +
Preference number: 4 (lower is better)
Translates to: GRYWLPALCPWPFPSWAGWARRP*GRSPDT
Trigger: AGTGTCCGGTGACCTCCCCCAGGGCCTCCTTGCCCA...CCCAGCCCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGGCTGGGGCTCAGCACCAAGCTTaGGGGTGGGGGCTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: GRYWLPALCPWPFPSWAGAQHQA*GWGLLL
Trigger: CAGCAGCAGCCCCCACCCCCAAGCTTGGTGCTGAGC...CCCAGCCCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GGCTGGGGCCACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGGAGTGTGCAGGGGCTaGAGGAGAGACCCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: GWGHGTFICSHQVPAHLGGVCRG*RRDPPG
Trigger: GCCAGGAGGGTCTCTCCTCCAGCCCCTGCACACTCC...CCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGTGGCCCCAGCC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR TCA 90 bp GGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGGGCAGTCGACCAGCGTaGCCTGAAGCAGTGGCTCGC +
Preference number: 4 (lower is better)
Translates to: GSGRYWLPALCPWPFPSWGSRPA*PEAVAR
Trigger: GCGAGCCACTGCTTCAGGTCACGCTGGTCGACTGCC...CCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR TCA 90 bp GGCTGGAGGAGAGACCCTCCTGGCCCCAGCAACCCATCCCCCTCAGCTCCTCACCAGTGCCTTGGCCTTTaGTGGAGAAACAGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: GWRRDPPGPSNPSPSAPHQCLGL*WRNSGP
Trigger: TGGACCACTGTTTCTCCATCAAAGGCCAAGGCACTG...GTGAGGAGCTGAGGGGGATGGGTTGCTGGGGCCAGGAGGGTCTCTCCTCCAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254730.11
ENST00000644579.2
CDS-3UTR TCA 90 bp GGGCTGGAGGAGAGACCCTCCTGGCCCCAGCAACCCATCCCCCTCAGCTCCTCAGTCTCCTTGCATGGCTaGAGTGATGGGCATGTGGAA +
Preference number: 4 (lower is better)
Translates to: GLEERPSWPQQPIPLSSSVSLHG*SDGHVE
Trigger: TTCCACATGCCCATCACTTCAGCCATGCAAGGAGAC...TGAGGAGCTGAGGGGGATGGGTTGCTGGGGCCAGGAGGGTCTCTCCTCCAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR TCA 90 bp GGCTGGAGGAGAGACCCTCCTGGCCCCAGCAACCCATCCCCCTCAGCTCCTCACTATCTGGAGCAGGACTaGAGAACATCAACCGGCCCA +
Preference number: 4 (lower is better)
Translates to: GWRRDPPGPSNPSPSAPHYLEQD*RTSTGP
Trigger: TGGGCCGGTTGATGTTCTTCAGTCCTGCTCCAGATA...GTGAGGAGCTGAGGGGGATGGGTTGCTGGGGCCAGGAGGGTCTCTCCTCCAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR TCA 90 bp GCCACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAGGGTTCCCGGGCCCGCTTCTTaGGGGCGGGTGTCAGGATCT +
Preference number: 4 (lower is better)
Translates to: ATGHLFVAIKCLPTWGRVPGPAS*GRVSGS
Trigger: AGATCCTGACACCCGCCCTCAAGAAGCGGGCCCGGG...AACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR TCA 90 bp GCCACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAGGGTTGAGCACCACATGCTGTaGGGGCTCGCTCCGCTCGGC +
Preference number: 4 (lower is better)
Translates to: ATGHLFVAIKCLPTWGRVEHHML*GLAPLG
Trigger: GCCGAGCGGAGCGAGCCCTCACAGCATGTGGTGCTC...AACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR TCA 90 bp GGGCTGGAGGAGAGACCCTCCTGGCCCCAGCAACCCATCCCCCTCAGCTCCTCATCTTCACCACCTCAATaGGCTCTGGAATGCCCTGTG +
Preference number: 4 (lower is better)
Translates to: GLEERPSWPQQPIPLSSSSSPPQ*ALECPV
Trigger: CACAGGGCATTCCAGAGCTCATTGAGGTGGTGAAGA...TGAGGAGCTGAGGGGGATGGGTTGCTGGGGCCAGGAGGGTCTCTCCTCCAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000483457.1
ENST00000644955.1
CDS-3UTR GCA 90 bp ACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCTCGCGGCTCTGCGGCTaGTTGTCAAAGGCGGCGGTG +
Preference number: 4 (lower is better)
Translates to: TDGAVEDTGYQPSAHGPFSRLCG*LSKAAV
Trigger: CACCGCCGCCTTTGACAAGCAGCCGCAGAGCCGCGA...GAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR GCA 90 bp AGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTTCGCGGCTCTGCGGCTaGTTGTCAAAGGCGGCGGTG +
Preference number: 4 (lower is better)
Translates to: RWGSGRYWLPALCPWPFPSRLCG*LSKAAV
Trigger: CACCGCCGCCTTTGACAAGCAGCCGCAGAGCCGCGA...AGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR GCA 90 bp ACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAGGGTTGAGCGGATGAGGGAGGCGTaGCCGGGGCAGTCGACCAGC +
Preference number: 4 (lower is better)
Translates to: TGHLFVAIKCLPTWGRVERMREA*PGQSTS
Trigger: GCTGGTCGACTGCCCCGGGCACGCCTCCCTCATCCG...CTCAACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR GCA 90 bp AGGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGCCGCATGGACAGTGTaGAGGGACTCGGGGGCACAC +
Preference number: 4 (lower is better)
Translates to: RWPTDGAVEDTGYQPSAHAAWTV*RDSGAH
Trigger: GTGTGCCCCCGAGTCCCTGCACACTGTCCATGCGGC...ATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR GCA 90 bp TGCAGGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCACCAGGGCCCACTGCTaGCGAGGACAATGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: CRWPTDGAVEDTGYQPSATRAHC*RGQWPS
Trigger: AGAGGGCCATTGTCCTCGGCAGCAGTGGGCCCTGGT...GGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACCTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR GCA 90 bp GGCTGGGGCCACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGAGGCTGAGCACCACATaGTGTGAGGGCTCGCTCCGC +
Preference number: 4 (lower is better)
Translates to: GWGHGTFICSHQVPAHLGRLSTT*CEGSLR
Trigger: GCGGAGCGAGCCCTCACAGCATGTGGTGCTCAGCCT...CCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGTGGCCCCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR GCA 90 bp GGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGAGGCTGAGCACCACATaGTGTGAGGGCTCGCTCCGC +
Preference number: 4 (lower is better)
Translates to: GGQQMGQWKILATSPLPMRLSTT*CEGSLR
Trigger: GCGGAGCGAGCCCTCACAGCATGTGGTGCTCAGCCT...CATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR GCA 90 bp GGGCTGGAGGAGAGACCCTCCTGGCCCCAGCAACCCATCCCCCTCAGCTCCTCAAGGGAGACTGAACCATaGGCTTGTGGGTGTCGAAGA +
Preference number: 4 (lower is better)
Translates to: GLEERPSWPQQPIPLSSSRETEP*ACGCRR
Trigger: TCTTCGACACCCACAAGCGCATGGTTCAGTCTCCCT...TGAGGAGCTGAGGGGGATGGGTTGCTGGGGCCAGGAGGGTCTCTCCTCCAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGGCTGGGTTGCCGCTGTCGATGTaGCCCAGCACGCCCACGTTC +
Preference number: 4 (lower is better)
Translates to: GRYWLPALCPWPFPSWAGLPLSM*PSTPTF
Trigger: GAACGTGGGCGTGCTGGGCCACATCGACAGCGGCAA...CCCAGCCCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GGGCTGGAGGAGAGACCCTCCTGGCCCCAGCAACCCATCCCCCTCAGCTCCTCACGAGGGATCTCTCGTTaGGATGGAAATCTGGGACGT +
Preference number: 4 (lower is better)
Translates to: GLEERPSWPQQPIPLSSSRGISR*DGNLGR
Trigger: ACGTCCCAGATTTCCATCCCAACGAGAGATCCCTCG...TGAGGAGCTGAGGGGGATGGGTTGCTGGGGCCAGGAGGGTCTCTCCTCCAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000254730.11
CDS-3UTR CCA 90 bp GGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCTGGAGCAGGATGCCATaGAAGGCTAGCCGGCACGTG +
Preference number: 4 (lower is better)
Translates to: GQQMGQWKILATSPLPMAWSRMP*KASRHV
Trigger: CACGTGCCGGCTAGCCTTCCATGGCATCCTGCTCCA...GGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGTGGGCAAGGAGGCCCTaGGGGAGGTCACCGGACACT +
Preference number: 4 (lower is better)
Translates to: GSGRYWLPALCPWPFPSWWARRP*GRSPDT
Trigger: AGTGTCCGGTGACCTCCCCCAGGGCCTCCTTGCCCA...CCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp TGGGCTGGGGCCACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGTGGGCAAGGAGGCCCTaGGGGAGGTCACCGGACACT +
Preference number: 4 (lower is better)
Translates to: WAGATGHLFVAIKCLPTWWARRP*GRSPDT
Trigger: AGTGTCCGGTGACCTCCCCCAGGGCCTCCTTGCCCA...CCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGTGGCCCCAGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp TGGGCTGGGGCCACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGAGTGTGCAGGGGCTaGAGGAGAGACCCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: WAGATGHLFVAIKCLPTWGVCRG*RRDPPG
Trigger: GCCAGGAGGGTCTCTCCTCCAGCCCCTGCACACTCC...CCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGTGGCCCCAGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GGCTGGGGCCACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGTGGCCCTTTCCTAGTTaGGCTGGGGGCTGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: GWGHGTFICSHQVPAHLGWPFPS*AGGCPG
Trigger: CCCAGGACAGCCCCCAGCCCAACTAGGAAAGGGCCA...CCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGTGGCCCCAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR TCA 90 bp GGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCACAAGGCATTCCGCTaGCTGGGTCTGCATCCCCTT +
Preference number: 4 (lower is better)
Translates to: GQQMGQWKILATSPLPMAHKAFR*LGLHPL
Trigger: AAGGGGATGCAGACCCAGTCAGCGGAATGCCTTGTG...GGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR TCA 90 bp GGCTGGAGGAGAGACCCTCCTGGCCCCAGCAACCCATCCCCCTCAGCTCCTCACCTTGCATGGCTGAAGTaGTGGGCATGTGGAACATCT +
Preference number: 4 (lower is better)
Translates to: GWRRDPPGPSNPSPSAPHLAWLK*WACGTS
Trigger: AGATGTTCCACATGCCCATCACTTCAGCCATGCAAG...GTGAGGAGCTGAGGGGGATGGGTTGCTGGGGCCAGGAGGGTCTCTCCTCCAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR TCA 90 bp AGGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATTCTTGGACTCGGGGCTaGGGCCACCTGGGATGTGGA +
Preference number: 4 (lower is better)
Translates to: RWPTDGAVEDTGYQPSAHSWTRG*GHLGCG
Trigger: TCCACATCCCAGGTGGCCTCAGCCCCGAGTCCAAGA...ATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254730.11
ENST00000644579.2
CDS-3UTR TCA 90 bp GGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCGACACTCAGGGAGACTaGACCATGCGCTTGTGGGTG +
Preference number: 4 (lower is better)
Translates to: GQQMGQWKILATSPLPMADTQGD*TMRLWV
Trigger: CACCCACAAGCGCATGGTTCAGTCTCCCTGAGTGTC...GGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR TCA 90 bp GGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGAGTGGTCCACAGACATaGGGAACGGTCCCGAGGGGT +
Preference number: 4 (lower is better)
Translates to: GGQQMGQWKILATSPLPMSGPQT*GTVPRG
Trigger: ACCCCTCGGGACCGTTCCTCATGTCTGTGGACCACT...CATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644579.2
CDS-3UTR GCA 90 bp ACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAGGGTTGAGGCGCCAGCGCCGTCTTaGCGCTGTCGATGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: TGHLFVAIKCLPTWGRVEAPAPS*RCRCGP
Trigger: TGGGCCACATCGACAGCGGCAAGACGGCGCTGGCGC...CTCAACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR GCA 90 bp ACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAGGGTTGAGCCGCGCTCGCGGCTCTaGGGCTGCTTGTCAAAGGCG +
Preference number: 4 (lower is better)
Translates to: TGHLFVAIKCLPTWGRVEPRSRL*GCLSKA
Trigger: CGCCTTTGACAAGCAGCCGCAGAGCCGCGAGCGCGG...CTCAACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR GCA 90 bp GGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGGCTGGGCCCAGCCGGTCTCCTTaGATGGCTGAAGTGATGGGC +
Preference number: 4 (lower is better)
Translates to: GRYWLPALCPWPFPSWAGPSRSP*MAEVMG
Trigger: GCCCATCACTTCAGCCATGCAAGGAGACCGGCTGGG...CCCAGCCCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR GCA 90 bp AGGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATACCAGGGCCCACTGCTaGCGAGGACAATGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: RWPTDGAVEDTGYQPSAHTRAHC*RGQWPS
Trigger: AGAGGGCCATTGTCCTCGGCAGCAGTGGGCCCTGGT...ATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR GCA 90 bp GCCACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAGGGTTGCCCGTGGAGCAGGATaGCATGGAAGGCTAGCCGGC +
Preference number: 4 (lower is better)
Translates to: ATGHLFVAIKCLPTWGRVARGAG*HGRLAG
Trigger: GCCGGCTAGCCTTCCATGGCATCCTGCTCCACGGGC...AACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR GCA 90 bp GGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGGGTTGAGACTGGCCTaGAGGTGGCCAACAGATGGG +
Preference number: 4 (lower is better)
Translates to: GGQQMGQWKILATSPLPMGLRLA*RWPTDG
Trigger: CCCATCTGTTGGCCACCTGCAGGCCAGTCTCAACCC...CATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGTTGCCGCTGTCGATGTaGCCCAGCACGCCCACGTTC +
Preference number: 4 (lower is better)
Translates to: GSGRYWLPALCPWPFPSWLPLSM*PSTPTF
Trigger: GAACGTGGGCGTGCTGGGCCACATCGACAGCGGCAA...CCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp ACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCTTGCCGCTGTCGATGTaGCCCAGCACGCCCACGTTC +
Preference number: 4 (lower is better)
Translates to: TDGAVEDTGYQPSAHGPFLPLSM*PSTPTF
Trigger: GAACGTGGGCGTGCTGGGCCACATCGACAGCGGCAA...GAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp TGCAGGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCTGTCAAAGGCGGCGGTaGAGGCTGTGGTGCTTAGCG +
Preference number: 4 (lower is better)
Translates to: CRWPTDGAVEDTGYQPSACQRRR*RLWCLA
Trigger: CGCTAAGCACCACAGCCTCCACCGCCGCCTTTGACA...GGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GGCTGGAGGAGAGACCCTCCTGGCCCCAGCAACCCATCCCCCTCAGCTCCTCACGTGCACCTCGGAACTTaGTGTTCTCTAGGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: GWRRDPPGPSNPSPSAPHVHLGT*CSLGSS
Trigger: AGAAGACCCTAGAGAACACCAAGTTCCGAGGTGCAC...GTGAGGAGCTGAGGGGGATGGGTTGCTGGGGCCAGGAGGGTCTCTCCTCCAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GGCTGGAGGAGAGACCCTCCTGGCCCCAGCAACCCATCCCCCTCAGCTCCTCACGTTGGGATGGAAATCTaGGACGTCAGGAGCTCAATG +
Preference number: 4 (lower is better)
Translates to: GWRRDPPGPSNPSPSAPHVGMEI*DVRSSM
Trigger: CATTGAGCTCCTGACGTCCCAGATTTCCATCCCAAC...GTGAGGAGCTGAGGGGGATGGGTTGCTGGGGCCAGGAGGGTCTCTCCTCCAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254730.11
ENST00000644579.2
CDS-3UTR CCA 90 bp GGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGGCTGGGGAGATGAGGGCCGCATaGACAGTGTGCAGGGACTCG +
Preference number: 4 (lower is better)
Translates to: GRYWLPALCPWPFPSWAGEMRAA*TVCRDS
Trigger: CGAGTCCCTGCACACTGTCCATGCGGCCCTCATCTC...CCCAGCCCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGGCTGGGTGTGGAACTTGGCCTTaGTTTGCAGGGGCCCCCGGA +
Preference number: 4 (lower is better)
Translates to: GRYWLPALCPWPFPSWAGCGTWP*FAGAPG
Trigger: TCCGGGGGCCCCTGCAAACCAAGGCCAAGTTCCACA...CCCAGCCCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GGCTGGGGCCACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGTGTGGAACTTGGCCTTaGTTTGCAGGGGCCCCCGGA +
Preference number: 4 (lower is better)
Translates to: GWGHGTFICSHQVPAHLGCGTWP*FAGAPG
Trigger: TCCGGGGGCCCCTGCAAACCAAGGCCAAGTTCCACA...CCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGTGGCCCCAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GGGCTGGAGGAGAGACCCTCCTGGCCCCAGCAACCCATCCCCCTCAGCTCCTCATGGCCCACTGTAATGTaGAACTTGGCCTTGGTTTGC +
Preference number: 4 (lower is better)
Translates to: GLEERPSWPQQPIPLSSSWPTVM*NLALVC
Trigger: GCAAACCAAGGCCAAGTTCCACATTACAGTGGGCCA...TGAGGAGCTGAGGGGGATGGGTTGCTGGGGCCAGGAGGGTCTCTCCTCCAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GGCTGGAGGAGAGACCCTCCTGGCCCCAGCAACCCATCCCCCTCAGCTCCTCACTGGCCCACTGTAATGTaGAACTTGGCCTTGGTTTGC +
Preference number: 4 (lower is better)
Translates to: GWRRDPPGPSNPSPSAPHWPTVM*NLALVC
Trigger: GCAAACCAAGGCCAAGTTCCACATTACAGTGGGCCA...GTGAGGAGCTGAGGGGGATGGGTTGCTGGGGCCAGGAGGGTCTCTCCTCCAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GGCTGGAGGAGAGACCCTCCTGGCCCCAGCAACCCATCCCCCTCAGCTCCTCACCTGGTGTCAAATCCTTaGACAGGTACTGCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: GWRRDPPGPSNPSPSAPHLVSNP*TGTAPG
Trigger: TCCAGGAGCAGTACCTGTCCAAGGATTTGACACCAG...GTGAGGAGCTGAGGGGGATGGGTTGCTGGGGCCAGGAGGGTCTCTCCTCCAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp ACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAGGGTTGAGTGGCCCTCTGTGGCCTaGCCGGCCTTCTTGTCGGCC +
Preference number: 4 (lower is better)
Translates to: TGHLFVAIKCLPTWGRVEWPSVA*PAFLSA
Trigger: GGCCGACAAGAAGGCCGGCCAGGCCACAGAGGGCCA...CTCAACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GGCTGGGGCCACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGACAATGGCCCTCTGTaGCCTGGCCGGCCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: GWGHGTFICSHQVPAHLGDNGPL*PGRPSC
Trigger: ACAAGAAGGCCGGCCAGGCCACAGAGGGCCATTGTC...CCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGTGGCCCCAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp TGCAGGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCGACAATGGCCCTCTGTaGCCTGGCCGGCCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: CRWPTDGAVEDTGYQPSADNGPL*PGRPSC
Trigger: ACAAGAAGGCCGGCCAGGCCACAGAGGGCCATTGTC...GGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GCCACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAGGGTTCACAGCAGCCTGGACTaGGCTGGGCAAGGAGGCCCT +
Preference number: 4 (lower is better)
Translates to: ATGHLFVAIKCLPTWGRVHSSLD*AGQGGP
Trigger: AGGGCCTCCTTGCCCAGCCCAGTCCAGGCTGCTGTG...AACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGGCTGGGGGAGAGGCTGAGGCGTaGCTGGTTGGGATTTGGCAC +
Preference number: 4 (lower is better)
Translates to: GRYWLPALCPWPFPSWAGGEAEA*LVGIWH
Trigger: GTGCCAAATCCCAACCAGCCACGCCTCAGCCTCTCC...CCCAGCCCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GGCTGGGGCCACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGGAGAGGCTGAGGCGTaGCTGGTTGGGATTTGGCAC +
Preference number: 4 (lower is better)
Translates to: GWGHGTFICSHQVPAHLGGEAEA*LVGIWH
Trigger: GTGCCAAATCCCAACCAGCCACGCCTCAGCCTCTCC...CCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGTGGCCCCAGCC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGGCTGTGGCCCTTTCCTAGTTaGGCTGGGGGCTGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: VEDTGYQPSAHGPFLVGLWPFPS*AGGCPG
Trigger: CCCAGGACAGCCCCCAGCCCAACTAGGAAAGGGCCA...CAGCCCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp TGGGCTGGGGCCACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGTGGCCCTTTCCTAGTTaGGCTGGGGGCTGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: WAGATGHLFVAIKCLPTWWPFPS*AGGCPG
Trigger: CCCAGGACAGCCCCCAGCCCAACTAGGAAAGGGCCA...CCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGTGGCCCCAGCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR TCA 90 bp GGGCTGGAGGAGAGACCCTCCTGGCCCCAGCAACCCATCCCCCTCAGCTCCTCACCTTGGTCACATCGATaGCCAGCATCATCAGATCAA +
Preference number: 4 (lower is better)
Translates to: GLEERPSWPQQPIPLSSSPWSHR*PASSDQ
Trigger: TTGATCTGATGATGCTGGTCATCGATGTGACCAAGG...TGAGGAGCTGAGGGGGATGGGTTGCTGGGGCCAGGAGGGTCTCTCCTCCAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR TCA 90 bp GGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGGCTGGGCCTTCTTCACCACCTTaGGGGCAGGGATCTCCACAC +
Preference number: 4 (lower is better)
Translates to: GRYWLPALCPWPFPSWAGPSSPP*GQGSPH
Trigger: GTGTGGAGATCCCTGCCCTCAAGGTGGTGAAGAAGG...CCCAGCCCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254730.11
ENST00000644579.2
CDS-3UTR TCA 90 bp GGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCACATCAACCGGCCCATaGCTGTTTCATGGCCCACTG +
Preference number: 4 (lower is better)
Translates to: GQQMGQWKILATSPLPMATSTGP*LFHGPL
Trigger: CAGTGGGCCATGAAACAGTCATGGGCCGGTTGATGT...GGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR TCA 90 bp TGGGCTGGGGCCACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGACAGCCGAGGGCAGGTaGCGGGCTTCTCAAACTCCA +
Preference number: 4 (lower is better)
Translates to: WAGATGHLFVAIKCLPTWTAEGR*RASQTP
Trigger: TGGAGTTTGAGAAGCCCGTCACCTGCCCTCGGCTGT...CCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGTGGCCCCAGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR TCA 90 bp AGGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATACAGCCGAGGGCAGGTaGCGGGCTTCTCAAACTCCA +
Preference number: 4 (lower is better)
Translates to: RWPTDGAVEDTGYQPSAHTAEGR*RASQTP
Trigger: TGGAGTTTGAGAAGCCCGTCACCTGCCCTCGGCTGT...ATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR TCA 90 bp GTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGGCTGACAGCCGAGGGCAGGTaGCGGGCTTCTCAAACTCCA +
Preference number: 4 (lower is better)
Translates to: VEDTGYQPSAHGPFLVGLTAEGR*RASQTP
Trigger: TGGAGTTTGAGAAGCCCGTCACCTGCCCTCGGCTGT...CAGCCCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR TCA 90 bp GGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGCGGCACGTGTTGGTGTaGATGTCCGCATCTAGCCTG +
Preference number: 4 (lower is better)
Translates to: GGQQMGQWKILATSPLPMRHVLV*MSASSL
Trigger: CAGGCTAGATGCGGACATTCACACCAACACGTGCCG...CATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR TCA 90 bp AGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTCGAAGGCACTGTCGATaGTGCCCAGTTCCCCAGTGG +
Preference number: 4 (lower is better)
Translates to: RWGSGRYWLPALCPWPFPRRHCR*CPVPQW
Trigger: CCACTGGGGAACTGGGCATCATCGACAGTGCCTTCG...AGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254730.11
ENST00000644579.2
CDS-3UTR TCA 90 bp GGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAGGGTTGAGACTCCCGGGCCCGCTTCTTaGGGGCGGGTGTCAGGATCT +
Preference number: 4 (lower is better)
Translates to: GHLFVAIKCLPTWGRVETPGPAS*GRVSGS
Trigger: AGATCCTGACACCCGCCCTCAAGAAGCGGGCCCGGG...AGTCTCAACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR GCA 90 bp GGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAGGGTTGAGACTGCGCCAGCGCCGTCTTaGCGCTGTCGATGTGGCCCA +
Preference number: 4 (lower is better)
Translates to: GHLFVAIKCLPTWGRVETAPAPS*RCRCGP
Trigger: TGGGCCACATCGACAGCGGCAAGACGGCGCTGGCGC...AGTCTCAACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR GCA 90 bp TGCAGGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCTCCGCTGACTGGGTCTaGATCCCCTTGGTCACATCG +
Preference number: 4 (lower is better)
Translates to: CRWPTDGAVEDTGYQPSASADWV*IPLVTS
Trigger: CGATGTGACCAAGGGGATGCAGACCCAGTCAGCGGA...GGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR GCA 90 bp GGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGTCCGCTGACTGGGTCTaGATCCCCTTGGTCACATCG +
Preference number: 4 (lower is better)
Translates to: GGQQMGQWKILATSPLPMSADWV*IPLVTS
Trigger: CGATGTGACCAAGGGGATGCAGACCCAGTCAGCGGA...CATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR GCA 90 bp AGGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATCCCAGCCGGTCTCCTTaGATGGCTGAAGTGATGGGC +
Preference number: 4 (lower is better)
Translates to: RWPTDGAVEDTGYQPSAHPSRSP*MAEVMG
Trigger: GCCCATCACTTCAGCCATGCAAGGAGACCGGCTGGG...ATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR GCA 90 bp AGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTCCCAGCCGGTCTCCTTaGATGGCTGAAGTGATGGGC +
Preference number: 4 (lower is better)
Translates to: RWGSGRYWLPALCPWPFPPSRSP*MAEVMG
Trigger: GCCCATCACTTCAGCCATGCAAGGAGACCGGCTGGG...AGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR GCA 90 bp GCCACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAGGGTTACCAGGGCCCACTGCTaGCGAGGACAATGGCCCTCT +
Preference number: 4 (lower is better)
Translates to: ATGHLFVAIKCLPTWGRVTRAHC*RGQWPS
Trigger: AGAGGGCCATTGTCCTCGGCAGCAGTGGGCCCTGGT...AACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR GCA 90 bp GGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGTCCCCAGTGGACAAGTaGACCTTGAGCCCCACGAAG +
Preference number: 4 (lower is better)
Translates to: GGQQMGQWKILATSPLPMSPVDK*TLSPTK
Trigger: CTTCGTGGGGCTCAAGGTGCACTTGTCCACTGGGGA...CATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000254730.11
ENST00000644579.2
CDS-3UTR GCA 90 bp GGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGGCTGGGTGGCTACCAGCCCTCTaGCCATGGCCCTTTCCTAGT +
Preference number: 4 (lower is better)
Translates to: GRYWLPALCPWPFPSWAGWLPAL*PWPFPS
Trigger: ACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCA...CCCAGCCCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR GCA 90 bp GTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGGCTGGGGTTGAGACTGGCCTaGAGGTGGCCAACAGATGGG +
Preference number: 4 (lower is better)
Translates to: VEDTGYQPSAHGPFLVGLGLRLA*RWPTDG
Trigger: CCCATCTGTTGGCCACCTGCAGGCCAGTCTCAACCC...CAGCCCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp AGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTTGTCAAAGGCGGCGGTaGAGGCTGTGGTGCTTAGCG +
Preference number: 4 (lower is better)
Translates to: RWGSGRYWLPALCPWPFPCQRRR*RLWCLA
Trigger: CGCTAAGCACCACAGCCTCCACCGCCGCCTTTGACA...AGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGACCACGACCAGCTTCTaGCAGGCAATCTGGCCGATC +
Preference number: 4 (lower is better)
Translates to: GGQQMGQWKILATSPLPMTTTSF*QAIWPI
Trigger: GATCGGCCAGATTGCCTGCCAGAAGCTGGTCGTGGT...CATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp ACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCGAGATGAGGGCCGCATaGACAGTGTGCAGGGACTCG +
Preference number: 4 (lower is better)
Translates to: TDGAVEDTGYQPSAHGPFEMRAA*TVCRDS
Trigger: CGAGTCCCTGCACACTGTCCATGCGGCCCTCATCTC...GAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp ACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCTGTGGAACTTGGCCTTaGTTTGCAGGGGCCCCCGGA +
Preference number: 4 (lower is better)
Translates to: TDGAVEDTGYQPSAHGPFCGTWP*FAGAPG
Trigger: TCCGGGGGCCCCTGCAAACCAAGGCCAAGTTCCACA...GAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGGCTGTGTGGAACTTGGCCTTaGTTTGCAGGGGCCCCCGGA +
Preference number: 4 (lower is better)
Translates to: VEDTGYQPSAHGPFLVGLCGTWP*FAGAPG
Trigger: TCCGGGGGCCCCTGCAAACCAAGGCCAAGTTCCACA...CAGCCCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGGACAATGGCCCTCTGTaGCCTGGCCGGCCTTCTTGT +
Preference number: 4 (lower is better)
Translates to: GSGRYWLPALCPWPFPSWDNGPL*PGRPSC
Trigger: ACAAGAAGGCCGGCCAGGCCACAGAGGGCCATTGTC...CCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp ACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAGGGTTGAGTGCTGCCGAGGACAATaGCCCTCTGTGGCCTGGCCG +
Preference number: 4 (lower is better)
Translates to: TGHLFVAIKCLPTWGRVECCRGQ*PSVAWP
Trigger: CGGCCAGGCCACAGAGGGCCATTGTCCTCGGCAGCA...CTCAACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp AGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTTGGAGCAGGATGCCATaGAAGGCTAGCCGGCACGTG +
Preference number: 4 (lower is better)
Translates to: RWGSGRYWLPALCPWPFPWSRMP*KASRHV
Trigger: CACGTGCCGGCTAGCCTTCCATGGCATCCTGCTCCA...AGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp AGGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATTGGAGCAGGATGCCATaGAAGGCTAGCCGGCACGTG +
Preference number: 4 (lower is better)
Translates to: RWPTDGAVEDTGYQPSAHWSRMP*KASRHV
Trigger: CACGTGCCGGCTAGCCTTCCATGGCATCCTGCTCCA...ATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGCTGTCCTCTAGCCCGTaGAGCAGGATGCCATGGAAG +
Preference number: 4 (lower is better)
Translates to: GGQQMGQWKILATSPLPMLSSSP*SRMPWK
Trigger: CTTCCATGGCATCCTGCTCCACGGGCTAGAGGACAG...CATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp TGCAGGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCTGTACACCTTCAGCCTaGGCAGGAAGCTGTCGGCGT +
Preference number: 4 (lower is better)
Translates to: CRWPTDGAVEDTGYQPSACTPSA*AGSCRR
Trigger: ACGCCGACAGCTTCCTGCCCAGGCTGAAGGTGTACA...GGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GGCTGGGGCCACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGTGTACACCTTCAGCCTaGGCAGGAAGCTGTCGGCGT +
Preference number: 4 (lower is better)
Translates to: GWGHGTFICSHQVPAHLGCTPSA*AGSCRR
Trigger: ACGCCGACAGCTTCCTGCCCAGGCTGAAGGTGTACA...CCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGTGGCCCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GGCTGGAGGAGAGACCCTCCTGGCCCCAGCAACCCATCCCCCTCAGCTCCTCACAGCCCCACGAAGAGCTaGATGTTGGTTTCCTTTTTG +
Preference number: 4 (lower is better)
Translates to: GWRRDPPGPSNPSPSAPHSPTKS*MLVSFL
Trigger: CAAAAAGGAAACCAACATCCAGCTCTTCGTGGGGCT...GTGAGGAGCTGAGGGGGATGGGTTGCTGGGGCCAGGAGGGTCTCTCCTCCAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000254730.11
ENST00000644579.2
CDS-3UTR CCA 90 bp AGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTTTTGGCACAGCAGCCTaGACTGGGCTGGGCAAGGAG +
Preference number: 4 (lower is better)
Translates to: RWGSGRYWLPALCPWPFPFGTAA*TGLGKE
Trigger: CTCCTTGCCCAGCCCAGTCCAGGCTGCTGTGCCAAA...AGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp TGCAGGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCTGGCTGGTTGGGATTTaGCACAGCAGCCTGGACTGG +
Preference number: 4 (lower is better)
Translates to: CRWPTDGAVEDTGYQPSAWLVGI*HSSLDW
Trigger: CCAGTCCAGGCTGCTGTGCCAAATCCCAACCAGCCA...GGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACCTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGGCTGGGGGCAGTGGAAGATACTaGCTACCAGCCCTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: GRYWLPALCPWPFPSWAGGSGRY*LPALCP
Trigger: TGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCC...CCCAGCCCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGGCAGTGGAAGATACTaGCTACCAGCCCTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: GGQQMGQWKILATSPLPMGSGRY*LPALCP
Trigger: TGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCC...CATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCAGGTGGCCAACAGATaGGGCAGTGGAAGATACTGG +
Preference number: 4 (lower is better)
Translates to: GQQMGQWKILATSPLPMAQVANR*GSGRYW
Trigger: CCAGTATCTTCCACTGCCCCATCTGTTGGCCACCTG...GGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR TCA 90 bp GGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGCACAAGGCATTCCGCTaGCTGGGTCTGCATCCCCTT +
Preference number: 4 (lower is better)
Translates to: GSGRYWLPALCPWPFPSWHKAFR*LGLHPL
Trigger: AAGGGGATGCAGACCCAGTCAGCGGAATGCCTTGTG...CCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR TCA 90 bp GTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGGCTGCACAAGGCATTCCGCTaGCTGGGTCTGCATCCCCTT +
Preference number: 4 (lower is better)
Translates to: VEDTGYQPSAHGPFLVGLHKAFR*LGLHPL
Trigger: AAGGGGATGCAGACCCAGTCAGCGGAATGCCTTGTG...CAGCCCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR TCA 90 bp GGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGAGTGGTCCACAGACATaGGGAACGGTCCCGAGGGAT +
Preference number: 4 (lower is better)
Translates to: GSGRYWLPALCPWPFPSWSGPQT*GTVPRD
Trigger: ATCCCTCGGGACCGTTCCTCATGTCTGTGGACCACT...CCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254730.11
CDS-3UTR TCA 90 bp TGCAGGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCGAGGCTGATGGAGCCTaGAAGGATGGTCCCTGTCAT +
Preference number: 4 (lower is better)
Translates to: CRWPTDGAVEDTGYQPSAEADGA*KDGPCH
Trigger: ATGACAGGGACCATCCTTTCAGGCTCCATCAGCCTC...GGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254730.11
ENST00000644579.2
CDS-3UTR TCA 90 bp GGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGGCTGGGGAGGCTGATGGAGCCTaGAAGGATGGTCCCTGTCAT +
Preference number: 4 (lower is better)
Translates to: GRYWLPALCPWPFPSWAGEADGA*KDGPCH
Trigger: ATGACAGGGACCATCCTTTCAGGCTCCATCAGCCTC...CCCAGCCCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254730.11
ENST00000644579.2
CDS-3UTR TCA 90 bp GGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCGTCTCCTTGCATGGCTaGAGTGATGGGCATGTGGAA +
Preference number: 4 (lower is better)
Translates to: GQQMGQWKILATSPLPMAVSLHG*SDGHVE
Trigger: TTCCACATGCCCATCACTTCAGCCATGCAAGGAGAC...GGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR TCA 90 bp GTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGGCTGCGGCACGTGTTGGTGTaGATGTCCGCATCTAGCCTG +
Preference number: 4 (lower is better)
Translates to: VEDTGYQPSAHGPFLVGLRHVLV*MSASSL
Trigger: CAGGCTAGATGCGGACATTCACACCAACACGTGCCG...CAGCCCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR TCA 90 bp GGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGCGGCACGTGTTGGTGTaGATGTCCGCATCTAGCCTG +
Preference number: 4 (lower is better)
Translates to: GSGRYWLPALCPWPFPSWRHVLV*MSASSL
Trigger: CAGGCTAGATGCGGACATTCACACCAACACGTGCCG...CCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR TCA 90 bp AGGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATTGGACAAGTGCACCTTaGGCCCCACGAAGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: RWPTDGAVEDTGYQPSAHWTSAP*APRRAG
Trigger: TCCAGCTCTTCGTGGGGCTCAAGGTGCACTTGTCCA...ATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254730.11
ENST00000644579.2
CDS-3UTR TCA 90 bp GTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGGCTGTGGACAAGTGCACCTTaGGCCCCACGAAGAGCTGGA +
Preference number: 4 (lower is better)
Translates to: VEDTGYQPSAHGPFLVGLWTSAP*APRRAG
Trigger: TCCAGCTCTTCGTGGGGCTCAAGGTGCACTTGTCCA...CAGCCCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254730.11
ENST00000644579.2
CDS-3UTR TCA 90 bp ACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTGGGATGTGGATCTTaGACTTGCCGCTCTGGCCGA +
Preference number: 4 (lower is better)
Translates to: TDGAVEDTGYQPSAHGPFLGCGS*TCRSGR
Trigger: TCGGCCAGAGCGGCAAGTTCAAGATCCACATCCCAG...GAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254730.11
ENST00000644579.2
CDS-3UTR TCA 90 bp GGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGGACACTCAGGGAGACTaGACCATGCGCTTGTGGGTG +
Preference number: 4 (lower is better)
Translates to: GSGRYWLPALCPWPFPSWDTQGD*TMRLWV
Trigger: CACCCACAAGCGCATGGTTCAGTCTCCCTGAGTGTC...CCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR TCA 90 bp AGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTGACACTCAGGGAGACTaGACCATGCGCTTGTGGGTG +
Preference number: 4 (lower is better)
Translates to: RWGSGRYWLPALCPWPFPDTQGD*TMRLWV
Trigger: CACCCACAAGCGCATGGTTCAGTCTCCCTGAGTGTC...AGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR GCA 90 bp GTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGGCTGTCCCCAGTGGACAAGTaGACCTTGAGCCCCACGAAG +
Preference number: 4 (lower is better)
Translates to: VEDTGYQPSAHGPFLVGLSPVDK*TLSPTK
Trigger: CTTCGTGGGGCTCAAGGTGCACTTGTCCACTGGGGA...CAGCCCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254730.11
ENST00000644579.2
CDS-3UTR GCA 90 bp ACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAGGGTTGAGAGGCTGAGCACCACATaGTGTGAGGGCTCGCTCCGC +
Preference number: 4 (lower is better)
Translates to: TGHLFVAIKCLPTWGRVERLSTT*CEGSLR
Trigger: GCGGAGCGAGCCCTCACAGCATGTGGTGCTCAGCCT...CTCAACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR GCA 90 bp ACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCTGGCTACCAGCCCTCTaGCCATGGCCCTTTCCTAGT +
Preference number: 4 (lower is better)
Translates to: TDGAVEDTGYQPSAHGPFWLPAL*PWPFPS
Trigger: ACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCA...GAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR GCA 90 bp GCCACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAGGGTTGGGTTGAGACTGGCCTaGAGGTGGCCAACAGATGGG +
Preference number: 4 (lower is better)
Translates to: ATGHLFVAIKCLPTWGRVGLRLA*RWPTDG
Trigger: CCCATCTGTTGGCCACCTGCAGGCCAGTCTCAACCC...AACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR GCA 90 bp GGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGTTTGTAGCCATCAAGTaGCTGCCCACCTGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: GSGRYWLPALCPWPFPSWFVAIK*LPTWGR
Trigger: CCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAA...CCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp AGGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATAGGCATTCCGCTGACTaGGTCTGCATCCCCTTGGTC +
Preference number: 4 (lower is better)
Translates to: RWPTDGAVEDTGYQPSAHRHSAD*VCIPLV
Trigger: GACCAAGGGGATGCAGACCCAGTCAGCGGAATGCCT...ATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp TGGGCTGGGGCCACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGACCACGACCAGCTTCTaGCAGGCAATCTGGCCGATC +
Preference number: 4 (lower is better)
Translates to: WAGATGHLFVAIKCLPTWTTTSF*QAIWPI
Trigger: GATCGGCCAGATTGCCTGCCAGAAGCTGGTCGTGGT...CCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGTGGCCCCAGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCGAGCTCAATGAGCTCTaGAATGCCCTGTGGAGCTTC +
Preference number: 4 (lower is better)
Translates to: GQQMGQWKILATSPLPMAELNEL*NALWSF
Trigger: GAAGCTCCACAGGGCATTCCAGAGCTCATTGAGCTC...GGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254730.11
ENST00000644579.2
CDS-3UTR CCA 90 bp GGGCTGGAGGAGAGACCCTCCTGGCCCCAGCAACCCATCCCCCTCAGCTCCTCATTGATGGAGAAACAGTaGTCCACAGACATGAGGAAC +
Preference number: 4 (lower is better)
Translates to: GLEERPSWPQQPIPLSSSLMEKQ*STDMRN
Trigger: GTTCCTCATGTCTGTGGACCACTGTTTCTCCATCAA...TGAGGAGCTGAGGGGGATGGGTTGCTGGGGCCAGGAGGGTCTCTCCTCCAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254730.11
ENST00000644579.2
CDS-3UTR CCA 90 bp GGCTGGGGCCACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGAGCTTAGGGTCAAACTaGGTGACGCAGATGCCCAGC +
Preference number: 4 (lower is better)
Translates to: GWGHGTFICSHQVPAHLGSLGSN*VTQMPS
Trigger: GCTGGGCATCTGCGTCACCCAGTTTGACCCTAAGCT...CCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGTGGCCCCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GCCACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAGGGTTGAGATGAGGGCCGCATaGACAGTGTGCAGGGACTCG +
Preference number: 4 (lower is better)
Translates to: ATGHLFVAIKCLPTWGRVEMRAA*TVCRDS
Trigger: CGAGTCCCTGCACACTGTCCATGCGGCCCTCATCTC...AACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GGCTGGAGGAGAGACCCTCCTGGCCCCAGCAACCCATCCCCCTCAGCTCCTCACATTGTCTGTCACTGCTaGTGTCAAATCCTTGGACAG +
Preference number: 4 (lower is better)
Translates to: GWRRDPPGPSNPSPSAPHIVCHC*CQILGQ
Trigger: CTGTCCAAGGATTTGACACCAGCAGTGACAGACAAT...GTGAGGAGCTGAGGGGGATGGGTTGCTGGGGCCAGGAGGGTCTCTCCTCCAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGTGTCCGCATCTAGCCTaGAGCCAATCACCAGGCACA +
Preference number: 4 (lower is better)
Translates to: GGQQMGQWKILATSPLPMCPHLA*SQSPGT
Trigger: TGTGCCTGGTGATTGGCTCCAGGCTAGATGCGGACA...CATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGTGTACACCTTCAGCCTaGGCAGGAAGCTGTCGGCGT +
Preference number: 4 (lower is better)
Translates to: GSGRYWLPALCPWPFPSWCTPSA*AGSCRR
Trigger: ACGCCGACAGCTTCCTGCCCAGGCTGAAGGTGTACA...CCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp TGCAGGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCGGGGCTGAGGCCACCTaGGATGTGGATCTTGAACTT +
Preference number: 4 (lower is better)
Translates to: CRWPTDGAVEDTGYQPSAGAEAT*DVDLEL
Trigger: AAGTTCAAGATCCACATCCCAGGTGGCCTCAGCCCC...GGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACCTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254730.11
ENST00000644579.2
CDS-3UTR CCA 90 bp GCCACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAGGGTTTTTGGCACAGCAGCCTaGACTGGGCTGGGCAAGGAG +
Preference number: 4 (lower is better)
Translates to: ATGHLFVAIKCLPTWGRVFGTAA*TGLGKE
Trigger: CTCCTTGCCCAGCCCAGTCCAGGCTGCTGTGCCAAA...AACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGTGGCTGGTTGGGATTTaGCACAGCAGCCTGGACTGG +
Preference number: 4 (lower is better)
Translates to: GSGRYWLPALCPWPFPSWWLVGI*HSSLDW
Trigger: CCAGTCCAGGCTGCTGTGCCAAATCCCAACCAGCCA...CCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAGGGTTGAGACTGGAGTGTGCAGGGGCTaGAGGAGAGACCCTCCTGGC +
Preference number: 4 (lower is better)
Translates to: GHLFVAIKCLPTWGRVETGVCRG*RRDPPG
Trigger: GCCAGGAGGGTCTCTCCTCCAGCCCCTGCACACTCC...AGTCTCAACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp AGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTGGCAGTGGAAGATACTaGCTACCAGCCCTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: RWGSGRYWLPALCPWPFPGSGRY*LPALCP
Trigger: TGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCC...AGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR TCA 90 bp AGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTACGTCAGGAGCTCAATaGGCTCTGGAATGCCCTGTG +
Preference number: 4 (lower is better)
Translates to: RWGSGRYWLPALCPWPFPTSGAQ*ALECPV
Trigger: CACAGGGCATTCCAGAGCTCATTGAGCTCCTGACGT...AGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254730.11
ENST00000644579.2
CDS-3UTR TCA 90 bp TGCAGGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCTCTTTTCCACAGAGATaGGGGCCGCATGGACAGTGT +
Preference number: 4 (lower is better)
Translates to: CRWPTDGAVEDTGYQPSASFPQR*GPHGQC
Trigger: ACACTGTCCATGCGGCCCTCATCTCTGTGGAAAAGA...GGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR TCA 90 bp AGGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATACATCAACCGGCCCATaGCTGTTTCATGGCCCACTG +
Preference number: 4 (lower is better)
Translates to: RWPTDGAVEDTGYQPSAHTSTGP*LFHGPL
Trigger: CAGTGGGCCATGAAACAGTCATGGGCCGGTTGATGT...ATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR TCA 90 bp GGCTGGGGCCACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGTATCTGGAGCAGGACTaGAGAACATCAACCGGCCCA +
Preference number: 4 (lower is better)
Translates to: GWGHGTFICSHQVPAHLGYLEQD*RTSTGP
Trigger: TGGGCCGGTTGATGTTCTTCAGTCCTGCTCCAGATA...CCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGTGGCCCCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR TCA 90 bp GGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGGCTGGGTATCTGGAGCAGGACTaGAGAACATCAACCGGCCCA +
Preference number: 4 (lower is better)
Translates to: GRYWLPALCPWPFPSWAGYLEQD*RTSTGP
Trigger: TGGGCCGGTTGATGTTCTTCAGTCCTGCTCCAGATA...CCCAGCCCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR TCA 90 bp GCCACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAGGGTTCGGCACGTGTTGGTGTaGATGTCCGCATCTAGCCTG +
Preference number: 4 (lower is better)
Translates to: ATGHLFVAIKCLPTWGRVRHVLV*MSASSL
Trigger: CAGGCTAGATGCGGACATTCACACCAACACGTGCCG...AACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR TCA 90 bp GCCACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAGGGTTCTGGGATGTGGATCTTaGACTTGCCGCTCTGGCCGA +
Preference number: 4 (lower is better)
Translates to: ATGHLFVAIKCLPTWGRVLGCGS*TCRSGR
Trigger: TCGGCCAGAGCGGCAAGTTCAAGATCCACATCCCAG...AACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254730.11
ENST00000644579.2
CDS-3UTR TCA 90 bp GGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAGGGTTGAGACTTCTTGGACTCGGGGCTaGGGCCACCTGGGATGTGGA +
Preference number: 4 (lower is better)
Translates to: GHLFVAIKCLPTWGRVETSWTRG*GHLGCG
Trigger: TCCACATCCCAGGTGGCCTCAGCCCCGAGTCCAAGA...AGTCTCAACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254730.11
ENST00000644579.2
CDS-3UTR TCA 90 bp GGCTGGGGCCACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGTCTTCACCACCTCAATaGGCTCTGGAATGCCCTGTG +
Preference number: 4 (lower is better)
Translates to: GWGHGTFICSHQVPAHLGSSPPQ*ALECPV
Trigger: CACAGGGCATTCCAGAGCTCATTGAGGTGGTGAAGA...CCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGTGGCCCCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000483457.1
ENST00000644955.1
CDS-3UTR GCA 90 bp GTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGGCTGAACTTGGCCTTGGTTTaGAGGGGCCCCCGGAAATAC +
Preference number: 4 (lower is better)
Translates to: VEDTGYQPSAHGPFLVGLNLALV*RGPRKY
Trigger: GTATTTCCGGGGGCCCCTGCAAACCAAGGCCAAGTT...CAGCCCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR GCA 90 bp AGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAACTTGGCCTTGGTTTaGAGGGGCCCCCGGAAATAC +
Preference number: 4 (lower is better)
Translates to: RWGSGRYWLPALCPWPFPNLALV*RGPRKY
Trigger: GTATTTCCGGGGGCCCCTGCAAACCAAGGCCAAGTT...AGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR GCA 90 bp GCCACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAGGGTTTTTGTAGCCATCAAGTaGCTGCCCACCTGGGGGAGG +
Preference number: 4 (lower is better)
Translates to: ATGHLFVAIKCLPTWGRVFVAIK*LPTWGR
Trigger: CCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAA...AACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGATCAGATCAATGATCTaGGCCCCGCCGATGATGGTC +
Preference number: 4 (lower is better)
Translates to: GGQQMGQWKILATSPLPMIRSMI*APPMMV
Trigger: GACCATCATCGGCGGGGCCCAGATCATTGATCTGAT...CATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGGCTGGGTTCTGGCAGGCAATCTaGCCGATCACAAGGCATTCC +
Preference number: 4 (lower is better)
Translates to: GRYWLPALCPWPFPSWAGFWQAI*PITRHS
Trigger: GGAATGCCTTGTGATCGGCCAGATTGCCTGCCAGAA...CCCAGCCCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGTTCTGGCAGGCAATCTaGCCGATCACAAGGCATTCC +
Preference number: 4 (lower is better)
Translates to: GGQQMGQWKILATSPLPMFWQAI*PITRHS
Trigger: GGAATGCCTTGTGATCGGCCAGATTGCCTGCCAGAA...CATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGTGGAGCCTGAAAGGATaGTCCCTGTCATCACAGTGC +
Preference number: 4 (lower is better)
Translates to: GGQQMGQWKILATSPLPMWSLKG*SLSSQC
Trigger: GCACTGTGATGACAGGGACCATCCTTTCAGGCTCCA...CATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254730.11
ENST00000644579.2
CDS-3UTR CCA 90 bp GGCTGGGGCCACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGTGGAGCCTGAAAGGATaGTCCCTGTCATCACAGTGC +
Preference number: 4 (lower is better)
Translates to: GWGHGTFICSHQVPAHLGWSLKG*SLSSQC
Trigger: GCACTGTGATGACAGGGACCATCCTTTCAGGCTCCA...CCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGTGGCCCCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254730.11
ENST00000644579.2
CDS-3UTR CCA 90 bp AGGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATAGCTTAGGGTCAAACTaGGTGACGCAGATGCCCAGC +
Preference number: 4 (lower is better)
Translates to: RWPTDGAVEDTGYQPSAHSLGSN*VTQMPS
Trigger: GCTGGGCATCTGCGTCACCCAGTTTGACCCTAAGCT...ATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp ACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCAGCTTAGGGTCAAACTaGGTGACGCAGATGCCCAGC +
Preference number: 4 (lower is better)
Translates to: TDGAVEDTGYQPSAHGPFSLGSN*VTQMPS
Trigger: GCTGGGCATCTGCGTCACCCAGTTTGACCCTAAGCT...GAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGGCTGTGTCCGCATCTAGCCTaGAGCCAATCACCAGGCACA +
Preference number: 4 (lower is better)
Translates to: VEDTGYQPSAHGPFLVGLCPHLA*SQSPGT
Trigger: TGTGCCTGGTGATTGGCTCCAGGCTAGATGCGGACA...CAGCCCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GCCACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAGGGTTTGTACACCTTCAGCCTaGGCAGGAAGCTGTCGGCGT +
Preference number: 4 (lower is better)
Translates to: ATGHLFVAIKCLPTWGRVCTPSA*AGSCRR
Trigger: ACGCCGACAGCTTCCTGCCCAGGCTGAAGGTGTACA...AACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp AGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTTTGAACTTGCCGCTCTaGCCGAAGGCACTGTCGATG +
Preference number: 4 (lower is better)
Translates to: RWGSGRYWLPALCPWPFPLNLPL*PKALSM
Trigger: CATCGACAGTGCCTTCGGCCAGAGCGGCAAGTTCAA...AGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254730.11
ENST00000644579.2
CDS-3UTR CCA 90 bp AGGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATAGGCCACCTGGGATGTaGATCTTGAACTTGCCGCTC +
Preference number: 4 (lower is better)
Translates to: RWPTDGAVEDTGYQPSAHRPPGM*ILNLPL
Trigger: GAGCGGCAAGTTCAAGATCCACATCCCAGGTGGCCT...ATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254730.11
ENST00000644579.2
CDS-3UTR CCA 90 bp GGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGAGGCCACCTGGGATGTaGATCTTGAACTTGCCGCTC +
Preference number: 4 (lower is better)
Translates to: GSGRYWLPALCPWPFPSWRPPGM*ILNLPL
Trigger: GAGCGGCAAGTTCAAGATCCACATCCCAGGTGGCCT...CCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254730.11
ENST00000644579.2
CDS-3UTR CCA 90 bp ACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAGGGTTGAGTTTGGCACAGCAGCCTaGACTGGGCTGGGCAAGGAG +
Preference number: 4 (lower is better)
Translates to: TGHLFVAIKCLPTWGRVEFGTAA*TGLGKE
Trigger: CTCCTTGCCCAGCCCAGTCCAGGCTGCTGTGCCAAA...CTCAACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GCCACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAGGGTTAGGCTGAGGCGTGGCTaGTTGGGATTTGGCACAGCA +
Preference number: 4 (lower is better)
Translates to: ATGHLFVAIKCLPTWGRVRLRRG*LGFGTA
Trigger: TGCTGTGCCAAATCCCAACCAGCCACGCCTCAGCCT...AACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp ACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAGGGTTGAGGGAGAGGCTGAGGCGTaGCTGGTTGGGATTTGGCAC +
Preference number: 4 (lower is better)
Translates to: TGHLFVAIKCLPTWGRVEGEAEA*LVGIWH
Trigger: GTGCCAAATCCCAACCAGCCACGCCTCAGCCTCTCC...CTCAACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGCAACAGATGGGGCAGTaGAAGATACTGGCTACCAGC +
Preference number: 4 (lower is better)
Translates to: GGQQMGQWKILATSPLPMQQMGQ*KILATS
Trigger: GCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTG...CATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GGCTGGGGCCACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGCAACAGATGGGGCAGTaGAAGATACTGGCTACCAGC +
Preference number: 4 (lower is better)
Translates to: GWGHGTFICSHQVPAHLGQQMGQ*KILATS
Trigger: GCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTG...CCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGTGGCCCCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGCACCTCAATGAGCTCTaGAATGCCCTGTGGAGCTTC +
Preference number: 4 (lower is better)
Translates to: GGQQMGQWKILATSPLPMHLNEL*NALWSF
Trigger: GAAGCTCCACAGGGCATTCCAGAGCTCATTGAGGTG...CATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483457.1
ENST00000644955.1
CDS-3UTR CCA 90 bp ACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCGAGGGGTCTCTCGTTaGGATGGAAATCTGGGACGT +
Preference number: 4 (lower is better)
Translates to: TDGAVEDTGYQPSAHGPFRGVSR*DGNLGR
Trigger: ACGTCCCAGATTTCCATCCCAACGAGAGACCCCTCG...GAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644579.2
CDS-3UTR TCA 90 bp GGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCCTTGGTCACATCGATaGCCAGCATCATCAGATCAA +
Preference number: 4 (lower is better)
Translates to: GQQMGQWKILATSPLPMAPWSHR*PASSDQ
Trigger: TTGATCTGATGATGCTGGTCATCGATGTGACCAAGG...GGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR TCA 90 bp GGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGCAGTGCCTTGGCCTTTaGTGGAGAAACAGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: GSGRYWLPALCPWPFPSWQCLGL*WRNSGP
Trigger: TGGACCACTGTTTCTCCATCAAAGGCCAAGGCACTG...CCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254730.11
ENST00000644579.2
CDS-3UTR TCA 90 bp ACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAGGGTTGAGCACTGTCACCGAGGCTaGTGGAGCCTGAAAGGATGG +
Preference number: 4 (lower is better)
Translates to: TGHLFVAIKCLPTWGRVEHCHRG*WSLKGW
Trigger: CCATCCTTTCAGGCTCCATCAGCCTCGGTGACAGTG...CTCAACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254730.11
ENST00000644579.2
CDS-3UTR TCA 90 bp ACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAGGGTTGAGCCTTCTTCACCACCTTaGGGGCAGGGATCTCCACAC +
Preference number: 4 (lower is better)
Translates to: TGHLFVAIKCLPTWGRVEPSSPP*GQGSPH
Trigger: GTGTGGAGATCCCTGCCCTCAAGGTGGTGAAGAAGG...CTCAACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254730.11
ENST00000644579.2
CDS-3UTR TCA 90 bp GGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGCTTGCATGGCTGAAGTaGTGGGCATGTGGAACATCT +
Preference number: 4 (lower is better)
Translates to: GGQQMGQWKILATSPLPMLAWLK*WACGTS
Trigger: AGATGTTCCACATGCCCATCACTTCAGCCATGCAAG...CATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR TCA 90 bp AGGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGTCTCCTTGCATGGCTaGAGTGATGGGCATGTGGAA +
Preference number: 4 (lower is better)
Translates to: RWPTDGAVEDTGYQPSAHVSLHG*SDGHVE
Trigger: TTCCACATGCCCATCACTTCAGCCATGCAAGGAGAC...ATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR TCA 90 bp ACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCGTCTCCTTGCATGGCTaGAGTGATGGGCATGTGGAA +
Preference number: 4 (lower is better)
Translates to: TDGAVEDTGYQPSAHGPFVSLHG*SDGHVE
Trigger: TTCCACATGCCCATCACTTCAGCCATGCAAGGAGAC...GAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR TCA 90 bp GTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGGCTGTCTTTTCCACAGAGATaGGGGCCGCATGGACAGTGT +
Preference number: 4 (lower is better)
Translates to: VEDTGYQPSAHGPFLVGLSFPQR*GPHGQC
Trigger: ACACTGTCCATGCGGCCCTCATCTCTGTGGAAAAGA...CAGCCCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR TCA 90 bp GGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGTATCTGGAGCAGGACTaGAGAACATCAACCGGCCCA +
Preference number: 4 (lower is better)
Translates to: GSGRYWLPALCPWPFPSWYLEQD*RTSTGP
Trigger: TGGGCCGGTTGATGTTCTTCAGTCCTGCTCCAGATA...CCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR TCA 90 bp GGGCTGGAGGAGAGACCCTCCTGGCCCCAGCAACCCATCCCCCTCAGCTCCTCATGGAAAAGGTATTCTTaGGAGAAGTTGAAAGAGTCC +
Preference number: 4 (lower is better)
Translates to: GLEERPSWPQQPIPLSSSWKRYS*EKLKES
Trigger: GGACTCTTTCAACTTCTCTCAAGAATACCTTTTCCA...TGAGGAGCTGAGGGGGATGGGTTGCTGGGGCCAGGAGGGTCTCTCCTCCAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR TCA 90 bp GGCTGGAGGAGAGACCCTCCTGGCCCCAGCAACCCATCCCCCTCAGCTCCTCACTGGAAAAGGTATTCTTaGGAGAAGTTGAAAGAGTCC +
Preference number: 4 (lower is better)
Translates to: GWRRDPPGPSNPSPSAPHWKRYS*EKLKES
Trigger: GGACTCTTTCAACTTCTCTCAAGAATACCTTTTCCA...GTGAGGAGCTGAGGGGGATGGGTTGCTGGGGCCAGGAGGGTCTCTCCTCCAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR TCA 90 bp GGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAGGGTTGAGACTACAGCCGAGGGCAGGTaGCGGGCTTCTCAAACTCCA +
Preference number: 4 (lower is better)
Translates to: GHLFVAIKCLPTWGRVETTAEGR*RASQTP
Trigger: TGGAGTTTGAGAAGCCCGTCACCTGCCCTCGGCTGT...AGTCTCAACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR GCA 90 bp GGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGGCTGGGCACGGGTATAATCGGTaGACCTCGGAACTTGGTGTT +
Preference number: 4 (lower is better)
Translates to: GRYWLPALCPWPFPSWAGHGYNR*TSELGV
Trigger: AACACCAAGTTCCGAGGTGCACCGATTATACCCGTG...CCCAGCCCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR GCA 90 bp ACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCGCTCCACAAGGCCATaGTTGTGCTTCAGCTTGTAC +
Preference number: 4 (lower is better)
Translates to: TDGAVEDTGYQPSAHGPFRSTRP*LCFSLY
Trigger: GTACAAGCTGAAGCACAAGCATGGCCTTGTGGAGCG...GAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR GCA 90 bp GGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGCGCTCCACAAGGCCATaGTTGTGCTTCAGCTTGTAC +
Preference number: 4 (lower is better)
Translates to: GSGRYWLPALCPWPFPSWRSTRP*LCFSLY
Trigger: GTACAAGCTGAAGCACAAGCATGGCCTTGTGGAGCG...CCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR GCA 90 bp TGGGCTGGGGCCACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGCGCTCCACAAGGCCATaGTTGTGCTTCAGCTTGTAC +
Preference number: 4 (lower is better)
Translates to: WAGATGHLFVAIKCLPTWRSTRP*LCFSLY
Trigger: GTACAAGCTGAAGCACAAGCATGGCCTTGTGGAGCG...CCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGTGGCCCCAGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR GCA 90 bp TGGGCTGGGGCCACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGAGGGAGACTGAACCATaGGCTTGTGGGTGTCGAAGA +
Preference number: 4 (lower is better)
Translates to: WAGATGHLFVAIKCLPTWRETEP*ACGCRR
Trigger: TCTTCGACACCCACAAGCGCATGGTTCAGTCTCCCT...CCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGTGGCCCCAGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR GCA 90 bp GGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGAGGGAGACTGAACCATaGGCTTGTGGGTGTCGAAGA +
Preference number: 4 (lower is better)
Translates to: GSGRYWLPALCPWPFPSWRETEP*ACGCRR
Trigger: TCTTCGACACCCACAAGCGCATGGTTCAGTCTCCCT...CCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR GCA 90 bp ACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAGGGTTGAGTGGCTACCAGCCCTCTaGCCATGGCCCTTTCCTAGT +
Preference number: 4 (lower is better)
Translates to: TGHLFVAIKCLPTWGRVEWLPAL*PWPFPS
Trigger: ACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCA...CTCAACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp AGGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATATCAGATCAATGATCTaGGCCCCGCCGATGATGGTC +
Preference number: 4 (lower is better)
Translates to: RWPTDGAVEDTGYQPSAHIRSMI*APPMMV
Trigger: GACCATCATCGGCGGGGCCCAGATCATTGATCTGAT...ATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp AGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTATCAGATCAATGATCTaGGCCCCGCCGATGATGGTC +
Preference number: 4 (lower is better)
Translates to: RWGSGRYWLPALCPWPFPIRSMI*APPMMV
Trigger: GACCATCATCGGCGGGGCCCAGATCATTGATCTGAT...AGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp ACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAGGGTTGAGAGGCATTCCGCTGACTaGGTCTGCATCCCCTTGGTC +
Preference number: 4 (lower is better)
Translates to: TGHLFVAIKCLPTWGRVERHSAD*VCIPLV
Trigger: GACCAAGGGGATGCAGACCCAGTCAGCGGAATGCCT...CTCAACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp AGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTTTCTGGCAGGCAATCTaGCCGATCACAAGGCATTCC +
Preference number: 4 (lower is better)
Translates to: RWGSGRYWLPALCPWPFPFWQAI*PITRHS
Trigger: GGAATGCCTTGTGATCGGCCAGATTGCCTGCCAGAA...AGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp ACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAGGGTTGAGACCACGACCAGCTTCTaGCAGGCAATCTGGCCGATC +
Preference number: 4 (lower is better)
Translates to: TGHLFVAIKCLPTWGRVETTTSF*QAIWPI
Trigger: GATCGGCCAGATTGCCTGCCAGAAGCTGGTCGTGGT...CTCAACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGTGCACCTCGGAACTTaGTGTTCTCTAGGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: GGQQMGQWKILATSPLPMVHLGT*CSLGSS
Trigger: AGAAGACCCTAGAGAACACCAAGTTCCGAGGTGCAC...CATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGGCTGGGGTGCACCTCGGAACTTaGTGTTCTCTAGGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: GRYWLPALCPWPFPSWAGVHLGT*CSLGSS
Trigger: AGAAGACCCTAGAGAACACCAAGTTCCGAGGTGCAC...CCCAGCCCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp TGGGCTGGGGCCACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGAGCTCAATGAGCTCTaGAATGCCCTGTGGAGCTTC +
Preference number: 4 (lower is better)
Translates to: WAGATGHLFVAIKCLPTWELNEL*NALWSF
Trigger: GAAGCTCCACAGGGCATTCCAGAGCTCATTGAGCTC...CCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGTGGCCCCAGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254730.11
ENST00000644579.2
CDS-3UTR CCA 90 bp GGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGTGGCCCACTGTAATGTaGAACTTGGCCTTGGTTTGC +
Preference number: 4 (lower is better)
Translates to: GGQQMGQWKILATSPLPMWPTVM*NLALVC
Trigger: GCAAACCAAGGCCAAGTTCCACATTACAGTGGGCCA...CATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGCTGGTGTCAAATCCTTaGACAGGTACTGCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: GGQQMGQWKILATSPLPMLVSNP*TGTAPG
Trigger: TCCAGGAGCAGTACCTGTCCAAGGATTTGACACCAG...CATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGGCTGGGCTGGTGTCAAATCCTTaGACAGGTACTGCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: GRYWLPALCPWPFPSWAGLVSNP*TGTAPG
Trigger: TCCAGGAGCAGTACCTGTCCAAGGATTTGACACCAG...CCCAGCCCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GCCACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAGGGTTTGTCCGCATCTAGCCTaGAGCCAATCACCAGGCACA +
Preference number: 4 (lower is better)
Translates to: ATGHLFVAIKCLPTWGRVCPHLA*SQSPGT
Trigger: TGTGCCTGGTGATTGGCTCCAGGCTAGATGCGGACA...AACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGGCTGCTAGCCGGCACGTGTTaGTGTGAATGTCCGCATCTA +
Preference number: 4 (lower is better)
Translates to: VEDTGYQPSAHGPFLVGLLAGTC*CECPHL
Trigger: TAGATGCGGACATTCACACCAACACGTGCCGGCTAG...CAGCCCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GCCACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAGGGTTGGGGCTGAGGCCACCTaGGATGTGGATCTTGAACTT +
Preference number: 4 (lower is better)
Translates to: ATGHLFVAIKCLPTWGRVGAEAT*DVDLEL
Trigger: AAGTTCAAGATCCACATCCCAGGTGGCCTCAGCCCC...AACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254730.11
ENST00000644579.2
CDS-3UTR CCA 90 bp AGACTGAACCATGCGCTTGTGGGTGTCGAAGACATAACGCTTGAAAGTCAGGCTCACAGCAGCCTGGACTaGGCTGGGCAAGGAGGCCCT +
Preference number: 4 (lower is better)
Translates to: RLNHALVGVEDITLESQAHSSLD*AGQGGP
Trigger: AGGGCCTCCTTGCCCAGCCCAGTCCAGGCTGCTGTG...AGCCTGACTTTCAAGCGTTATGTCTTCGACACCCACAAGCGCATGGTTCAGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483457.1
ENST00000644955.1
CDS-3UTR CCA 90 bp AGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTCAACAGATGGGGCAGTaGAAGATACTGGCTACCAGC +
Preference number: 4 (lower is better)
Translates to: RWGSGRYWLPALCPWPFPQQMGQ*KILATS
Trigger: GCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTG...AGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGCAACAGATGGGGCAGTaGAAGATACTGGCTACCAGC +
Preference number: 4 (lower is better)
Translates to: GSGRYWLPALCPWPFPSWQQMGQ*KILATS
Trigger: GCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTG...CCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAGGGTTGAGACTAGACTGGCCTGCAGGTaGCCAACAGATGGGGCAGTG +
Preference number: 4 (lower is better)
Translates to: GHLFVAIKCLPTWGRVETRLACR*PTDGAV
Trigger: CACTGCCCCATCTGTTGGCCACCTGCAGGCCAGTCT...AGTCTCAACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGGCTGGGTCTCTCGTTGGGATaGAAATCTGGGACGTCAGGA +
Preference number: 4 (lower is better)
Translates to: VEDTGYQPSAHGPFLVGLGLSLG*KSGTSG
Trigger: TCCTGACGTCCCAGATTTCCATCCCAACGAGAGACC...CAGCCCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644579.2
CDS-3UTR TCA 90 bp TGCAGGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCCTTGGTCACATCGATaGCCAGCATCATCAGATCAA +
Preference number: 4 (lower is better)
Translates to: CRWPTDGAVEDTGYQPSAPWSHR*PASSDQ
Trigger: TTGATCTGATGATGCTGGTCATCGATGTGACCAAGG...GGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR TCA 90 bp GGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAGGGTTGAGACTCACTGTCACCGAGGCTaGTGGAGCCTGAAAGGATGG +
Preference number: 4 (lower is better)
Translates to: GHLFVAIKCLPTWGRVETHCHRG*WSLKGW
Trigger: CCATCCTTTCAGGCTCCATCAGCCTCGGTGACAGTG...AGTCTCAACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254730.11
ENST00000644579.2
CDS-3UTR TCA 90 bp ACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTTGCATGGCTGAAGTaGTGGGCATGTGGAACATCT +
Preference number: 4 (lower is better)
Translates to: TDGAVEDTGYQPSAHGPFLAWLK*WACGTS
Trigger: AGATGTTCCACATGCCCATCACTTCAGCCATGCAAG...GAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR TCA 90 bp GTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGGCTGTGTTGGTTTCCTTTTTaGACAGGGAGCGGCCGATCA +
Preference number: 4 (lower is better)
Translates to: VEDTGYQPSAHGPFLVGLCWFPF*TGSGRS
Trigger: TGATCGGCCGCTCCCTGTTCAAAAAGGAAACCAACA...CAGCCCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254730.11
ENST00000644579.2
CDS-3UTR TCA 90 bp ACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCTGTTGGTTTCCTTTTTaGACAGGGAGCGGCCGATCA +
Preference number: 4 (lower is better)
Translates to: TDGAVEDTGYQPSAHGPFCWFPF*TGSGRS
Trigger: TGATCGGCCGCTCCCTGTTCAAAAAGGAAACCAACA...GAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254730.11
ENST00000644579.2
CDS-3UTR GCA 90 bp TGGGCTGGGGCCACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGCACGGGTATAATCGGTaGACCTCGGAACTTGGTGTT +
Preference number: 4 (lower is better)
Translates to: WAGATGHLFVAIKCLPTWHGYNR*TSELGV
Trigger: AACACCAAGTTCCGAGGTGCACCGATTATACCCGTG...CCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGTGGCCCCAGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR GCA 90 bp ACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAGGGTTGAGAACTTGGCCTTGGTTTaGAGGGGCCCCCGGAAATAC +
Preference number: 4 (lower is better)
Translates to: TGHLFVAIKCLPTWGRVENLALV*RGPRKY
Trigger: GTATTTCCGGGGGCCCCTGCAAACCAAGGCCAAGTT...CTCAACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR GCA 90 bp GGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGACAAGGCCATGCTTGTaGTTCAGCTTGTACACCTTC +
Preference number: 4 (lower is better)
Translates to: GGQQMGQWKILATSPLPMTRPCL*FSLYTF
Trigger: GAAGGTGTACAAGCTGAAGCACAAGCATGGCCTTGT...CATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR GCA 90 bp TGCAGGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCACAAGGCCATGCTTGTaGTTCAGCTTGTACACCTTC +
Preference number: 4 (lower is better)
Translates to: CRWPTDGAVEDTGYQPSATRPCL*FSLYTF
Trigger: GAAGGTGTACAAGCTGAAGCACAAGCATGGCCTTGT...GGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAGGGTTGAGACTAGGCATTCCGCTGACTaGGTCTGCATCCCCTTGGTC +
Preference number: 4 (lower is better)
Translates to: GHLFVAIKCLPTWGRVETRHSAD*VCIPLV
Trigger: GACCAAGGGGATGCAGACCCAGTCAGCGGAATGCCT...AGTCTCAACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GCCACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAGGGTTTTCTGGCAGGCAATCTaGCCGATCACAAGGCATTCC +
Preference number: 4 (lower is better)
Translates to: ATGHLFVAIKCLPTWGRVFWQAI*PITRHS
Trigger: GGAATGCCTTGTGATCGGCCAGATTGCCTGCCAGAA...AACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGGCTGGTGCACCTCGGAACTTaGTGTTCTCTAGGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: VEDTGYQPSAHGPFLVGLVHLGT*CSLGSS
Trigger: AGAAGACCCTAGAGAACACCAAGTTCCGAGGTGCAC...CAGCCCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp AGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTGTTGGGATGGAAATCTaGGACGTCAGGAGCTCAATG +
Preference number: 4 (lower is better)
Translates to: RWGSGRYWLPALCPWPFPVGMEI*DVRSSM
Trigger: CATTGAGCTCCTGACGTCCCAGATTTCCATCCCAAC...AGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254730.11
ENST00000644579.2
CDS-3UTR CCA 90 bp TGGGCTGGGGCCACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGATCTCTCGTTGGGATaGAAATCTGGGACGTCAGGA +
Preference number: 4 (lower is better)
Translates to: WAGATGHLFVAIKCLPTWDLSLG*KSGTSG
Trigger: TCCTGACGTCCCAGATTTCCATCCCAACGAGAGATC...CCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGTGGCCCCAGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000254730.11
CDS-3UTR CCA 90 bp TGCAGGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCGTCATCACAGTGCCTTaGCCTTTGATGGAGAAACAG +
Preference number: 4 (lower is better)
Translates to: CRWPTDGAVEDTGYQPSAVITVP*PLMEKQ
Trigger: CTGTTTCTCCATCAAAGGCCAAGGCACTGTGATGAC...GGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254730.11
ENST00000644579.2
CDS-3UTR CCA 90 bp GGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGTCATCACAGTGCCTTaGCCTTTGATGGAGAAACAG +
Preference number: 4 (lower is better)
Translates to: GGQQMGQWKILATSPLPMVITVP*PLMEKQ
Trigger: CTGTTTCTCCATCAAAGGCCAAGGCACTGTGATGAC...CATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254730.11
ENST00000644579.2
CDS-3UTR CCA 90 bp AGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTCTGGTGTCAAATCCTTaGACAGGTACTGCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: RWGSGRYWLPALCPWPFPLVSNP*TGTAPG
Trigger: TCCAGGAGCAGTACCTGTCCAAGGATTTGACACCAG...AGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GCCACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAGGGTTCTAGCCGGCACGTGTTaGTGTGAATGTCCGCATCTA +
Preference number: 4 (lower is better)
Translates to: ATGHLFVAIKCLPTWGRVLAGTC*CECPHL
Trigger: TAGATGCGGACATTCACACCAACACGTGCCGGCTAG...AACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAGGGTTGAGACTCTGTCCTCTAGCCCGTaGAGCAGGATGCCATGGAAG +
Preference number: 4 (lower is better)
Translates to: GHLFVAIKCLPTWGRVETLSSSP*SRMPWK
Trigger: CTTCCATGGCATCCTGCTCCACGGGCTAGAGGACAG...AGTCTCAACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp TGCAGGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCAGCCCCACGAAGAGCTaGATGTTGGTTTCCTTTTTG +
Preference number: 4 (lower is better)
Translates to: CRWPTDGAVEDTGYQPSASPTKS*MLVSFL
Trigger: CAAAAAGGAAACCAACATCCAGCTCTTCGTGGGGCT...GGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACCTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254730.11
ENST00000644579.2
CDS-3UTR CCA 90 bp GGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAGGGTTGAGACTTGGCTGGTTGGGATTTaGCACAGCAGCCTGGACTGG +
Preference number: 4 (lower is better)
Translates to: GHLFVAIKCLPTWGRVETWLVGI*HSSLDW
Trigger: CCAGTCCAGGCTGCTGTGCCAAATCCCAACCAGCCA...AGTCTCAACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAGGGTTGAGACTAGGCTGAGGCGTGGCTaGTTGGGATTTGGCACAGCA +
Preference number: 4 (lower is better)
Translates to: GHLFVAIKCLPTWGRVETRLRRG*LGFGTA
Trigger: TGCTGTGCCAAATCCCAACCAGCCACGCCTCAGCCT...AGTCTCAACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp ACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAGGGTTGAGCAGGTGGCCAACAGATaGGGCAGTGGAAGATACTGG +
Preference number: 4 (lower is better)
Translates to: TGHLFVAIKCLPTWGRVEQVANR*GSGRYW
Trigger: CCAGTATCTTCCACTGCCCCATCTGTTGGCCACCTG...CTCAACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GCCACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAGGGTTCACCTCAATGAGCTCTaGAATGCCCTGTGGAGCTTC +
Preference number: 4 (lower is better)
Translates to: ATGHLFVAIKCLPTWGRVHLNEL*NALWSF
Trigger: GAAGCTCCACAGGGCATTCCAGAGCTCATTGAGGTG...AACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000483457.1
ENST00000644955.1
CDS-3UTR TCA 90 bp ACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCCTTGGTCACATCGATaGCCAGCATCATCAGATCAA +
Preference number: 4 (lower is better)
Translates to: TDGAVEDTGYQPSAHGPFPWSHR*PASSDQ
Trigger: TTGATCTGATGATGCTGGTCATCGATGTGACCAAGG...GAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR TCA 90 bp ACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAGGGTTGAGTCTTTTCCACAGAGATaGGGGCCGCATGGACAGTGT +
Preference number: 4 (lower is better)
Translates to: TGHLFVAIKCLPTWGRVESFPQR*GPHGQC
Trigger: ACACTGTCCATGCGGCCCTCATCTCTGTGGAAAAGA...CTCAACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR TCA 90 bp GGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAGGGTTGAGACTACATCAACCGGCCCATaGCTGTTTCATGGCCCACTG +
Preference number: 4 (lower is better)
Translates to: GHLFVAIKCLPTWGRVETTSTGP*LFHGPL
Trigger: CAGTGGGCCATGAAACAGTCATGGGCCGGTTGATGT...AGTCTCAACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR GCA 90 bp GCCACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAGGGTTCACGGGTATAATCGGTaGACCTCGGAACTTGGTGTT +
Preference number: 4 (lower is better)
Translates to: ATGHLFVAIKCLPTWGRVHGYNR*TSELGV
Trigger: AACACCAAGTTCCGAGGTGCACCGATTATACCCGTG...AACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGTGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR GCA 90 bp GGCTGGGGCCACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGTCCTTGGACAGGTACTaGTCCTGGAAAAGGTATTCT +
Preference number: 4 (lower is better)
Translates to: GWGHGTFICSHQVPAHLGSLDRY*SWKRYS
Trigger: AGAATACCTTTTCCAGGAGCAGTACCTGTCCAAGGA...CCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGTGGCCCCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR GCA 90 bp ACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCACAAGGCCATGCTTGTaGTTCAGCTTGTACACCTTC +
Preference number: 4 (lower is better)
Translates to: TDGAVEDTGYQPSAHGPFTRPCL*FSLYTF
Trigger: GAAGGTGTACAAGCTGAAGCACAAGCATGGCCTTGT...GAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGGCTGGGTGTGGAACATCTGCATaGACTTCACCTTCTTCACCA +
Preference number: 4 (lower is better)
Translates to: GRYWLPALCPWPFPSWAGCGTSA*TSPSSP
Trigger: TGGTGAAGAAGGTGAAGTCCATGCAGATGTTCCACA...CCCAGCCCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp AGACTGAACCATGCGCTTGTGGGTGTCGAAGACATAACGCTTGAAAGTCAGGCTGAGATGAGGGCCGCATaGACAGTGTGCAGGGACTCG +
Preference number: 4 (lower is better)
Translates to: RLNHALVGVEDITLESQAEMRAA*TVCRDS
Trigger: CGAGTCCCTGCACACTGTCCATGCGGCCCTCATCTC...AGCCTGACTTTCAAGCGTTATGTCTTCGACACCCACAAGCGCATGGTTCAGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483457.1
ENST00000644955.1
CDS-3UTR CCA 90 bp TGCAGGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCTCCAGTATAGGCTCCTaGTCAAAGTTATCTGGAGCA +
Preference number: 4 (lower is better)
Translates to: CRWPTDGAVEDTGYQPSASSIGS*SKLSGA
Trigger: TGCTCCAGATAACTTTGACCAGGAGCCTATACTGGA...GGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGGCTGGGTCCAGTATAGGCTCCTaGTCAAAGTTATCTGGAGCA +
Preference number: 4 (lower is better)
Translates to: GRYWLPALCPWPFPSWAGSSIGS*SKLSGA
Trigger: TGCTCCAGATAACTTTGACCAGGAGCCTATACTGGA...CCCAGCCCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GGCTGGGGCCACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGATTGTCTGTCACTGCTaGTGTCAAATCCTTGGACAG +
Preference number: 4 (lower is better)
Translates to: GWGHGTFICSHQVPAHLGIVCHC*CQILGQ
Trigger: CTGTCCAAGGATTTGACACCAGCAGTGACAGACAAT...CCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGTGGCCCCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR GCA 90 bp GGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCGGTCATTTTATCAATTaGTGCCTGTCTCTTTCCTTC +
Preference number: 4 (lower is better)
Translates to: GQQMGQWKILATSPLPMAGHFIN*CLSLSF
Trigger: GAAGGAAAGAGACAGGCAGCAATTGATAAAATGACC...GGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR GCA 90 bp AGGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATTCCTTGGACAGGTACTaGTCCTGGAAAAGGTATTCT +
Preference number: 4 (lower is better)
Translates to: RWPTDGAVEDTGYQPSAHSLDRY*SWKRYS
Trigger: AGAATACCTTTTCCAGGAGCAGTACCTGTCCAAGGA...ATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR GCA 90 bp GTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGGCTGTCCTTGGACAGGTACTaGTCCTGGAAAAGGTATTCT +
Preference number: 4 (lower is better)
Translates to: VEDTGYQPSAHGPFLVGLSLDRY*SWKRYS
Trigger: AGAATACCTTTTCCAGGAGCAGTACCTGTCCAAGGA...CAGCCCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR GCA 90 bp GGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGGCTGGGATCATTGTCTGTCACTaGTGGTGTCAAATCCTTGGA +
Preference number: 4 (lower is better)
Translates to: GRYWLPALCPWPFPSWAGIIVCH*WCQILG
Trigger: TCCAAGGATTTGACACCAGCAGTGACAGACAATGAT...CCCAGCCCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR GCA 90 bp GCCACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAGGGTTACAAGGCCATGCTTGTaGTTCAGCTTGTACACCTTC +
Preference number: 4 (lower is better)
Translates to: ATGHLFVAIKCLPTWGRVTRPCL*FSLYTF
Trigger: GAAGGTGTACAAGCTGAAGCACAAGCATGGCCTTGT...AACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR GCA 90 bp AGACTGAACCATGCGCTTGTGGGTGTCGAAGACATAACGCTTGAAAGTCAGGCTTGGCTACCAGCCCTCTaGCCATGGCCCTTTCCTAGT +
Preference number: 4 (lower is better)
Translates to: RLNHALVGVEDITLESQAWLPAL*PWPFPS
Trigger: ACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCA...AGCCTGACTTTCAAGCGTTATGTCTTCGACACCCACAAGCGCATGGTTCAGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483457.1
ENST00000644955.1
CDS-3UTR CCA 90 bp GTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGGCTGTGTGGAACATCTGCATaGACTTCACCTTCTTCACCA +
Preference number: 4 (lower is better)
Translates to: VEDTGYQPSAHGPFLVGLCGTSA*TSPSSP
Trigger: TGGTGAAGAAGGTGAAGTCCATGCAGATGTTCCACA...CAGCCCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp AGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTTGTGGAACATCTGCATaGACTTCACCTTCTTCACCA +
Preference number: 4 (lower is better)
Translates to: RWGSGRYWLPALCPWPFPCGTSA*TSPSSP
Trigger: TGGTGAAGAAGGTGAAGTCCATGCAGATGTTCCACA...AGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GGCTGGGGCCACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGCTGGTCAAAGTTATCTaGAGCAGGACTGAAGAACAT +
Preference number: 4 (lower is better)
Translates to: GWGHGTFICSHQVPAHLGLVKVI*SRTEEH
Trigger: ATGTTCTTCAGTCCTGCTCCAGATAACTTTGACCAG...CCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGTGGCCCCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGGCTGGGCTGGTCAAAGTTATCTaGAGCAGGACTGAAGAACAT +
Preference number: 4 (lower is better)
Translates to: GRYWLPALCPWPFPSWAGLVKVI*SRTEEH
Trigger: ATGTTCTTCAGTCCTGCTCCAGATAACTTTGACCAG...CCCAGCCCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp TGGGCTGGGGCCACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGTCCAGTATAGGCTCCTaGTCAAAGTTATCTGGAGCA +
Preference number: 4 (lower is better)
Translates to: WAGATGHLFVAIKCLPTWSSIGS*SKLSGA
Trigger: TGCTCCAGATAACTTTGACCAGGAGCCTATACTGGA...CCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGTGGCCCCAGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp AGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTATTGTCTGTCACTGCTaGTGTCAAATCCTTGGACAG +
Preference number: 4 (lower is better)
Translates to: RWGSGRYWLPALCPWPFPIVCHC*CQILGQ
Trigger: CTGTCCAAGGATTTGACACCAGCAGTGACAGACAAT...AGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGATTGTCTGTCACTGCTaGTGTCAAATCCTTGGACAG +
Preference number: 4 (lower is better)
Translates to: GSGRYWLPALCPWPFPSWIVCHC*CQILGQ
Trigger: CTGTCCAAGGATTTGACACCAGCAGTGACAGACAAT...CCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp AGACTGAACCATGCGCTTGTGGGTGTCGAAGACATAACGCTTGAAAGTCAGGCTGGCAGTGGAAGATACTaGCTACCAGCCCTCTGCCCA +
Preference number: 4 (lower is better)
Translates to: RLNHALVGVEDITLESQAGSGRY*LPALCP
Trigger: TGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCC...AGCCTGACTTTCAAGCGTTATGTCTTCGACACCCACAAGCGCATGGTTCAGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483457.1
ENST00000644955.1
CDS-3UTR TCA 90 bp GGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAGGGTTGAGACTCTTGCATGGCTGAAGTaGTGGGCATGTGGAACATCT +
Preference number: 4 (lower is better)
Translates to: GHLFVAIKCLPTWGRVETLAWLK*WACGTS
Trigger: AGATGTTCCACATGCCCATCACTTCAGCCATGCAAG...AGTCTCAACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR TCA 90 bp GGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGTGGAAAAGGTATTCTTaGGAGAAGTTGAAAGAGTCC +
Preference number: 4 (lower is better)
Translates to: GGQQMGQWKILATSPLPMWKRYS*EKLKES
Trigger: GGACTCTTTCAACTTCTCTCAAGAATACCTTTTCCA...CATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR GCA 90 bp GGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGGCTGGGGGTCATTTTATCAATTaGTGCCTGTCTCTTTCCTTC +
Preference number: 4 (lower is better)
Translates to: GRYWLPALCPWPFPSWAGGHFIN*CLSLSF
Trigger: GAAGGAAAGAGACAGGCAGCAATTGATAAAATGACC...CCCAGCCCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR GCA 90 bp GGCTGGGGCCACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGGTCATTTTATCAATTaGTGCCTGTCTCTTTCCTTC +
Preference number: 4 (lower is better)
Translates to: GWGHGTFICSHQVPAHLGGHFIN*CLSLSF
Trigger: GAAGGAAAGAGACAGGCAGCAATTGATAAAATGACC...CCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGTGGCCCCAGCC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR GCA 90 bp GCCACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAGGGTTTCCTTGGACAGGTACTaGTCCTGGAAAAGGTATTCT +
Preference number: 4 (lower is better)
Translates to: ATGHLFVAIKCLPTWGRVSLDRY*SWKRYS
Trigger: AGAATACCTTTTCCAGGAGCAGTACCTGTCCAAGGA...AACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR GCA 90 bp GGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGATCATTGTCTGTCACTaGTGGTGTCAAATCCTTGGA +
Preference number: 4 (lower is better)
Translates to: GSGRYWLPALCPWPFPSWIIVCH*WCQILG
Trigger: TCCAAGGATTTGACACCAGCAGTGACAGACAATGAT...CCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR GCA 90 bp AGGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATATCATTGTCTGTCACTaGTGGTGTCAAATCCTTGGA +
Preference number: 4 (lower is better)
Translates to: RWPTDGAVEDTGYQPSAHIIVCH*WCQILG
Trigger: TCCAAGGATTTGACACCAGCAGTGACAGACAATGAT...ATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGGCTGCTGGTCAAAGTTATCTaGAGCAGGACTGAAGAACAT +
Preference number: 4 (lower is better)
Translates to: VEDTGYQPSAHGPFLVGLLVKVI*SRTEEH
Trigger: ATGTTCTTCAGTCCTGCTCCAGATAACTTTGACCAG...CAGCCCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR TCA 90 bp AGGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATTGGAAAAGGTATTCTTaGGAGAAGTTGAAAGAGTCC +
Preference number: 4 (lower is better)
Translates to: RWPTDGAVEDTGYQPSAHWKRYS*EKLKES
Trigger: GGACTCTTTCAACTTCTCTCAAGAATACCTTTTCCA...ATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR GCA 90 bp GGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGGGTCATTTTATCAATTaGTGCCTGTCTCTTTCCTTC +
Preference number: 4 (lower is better)
Translates to: GSGRYWLPALCPWPFPSWGHFIN*CLSLSF
Trigger: GAAGGAAAGAGACAGGCAGCAATTGATAAAATGACC...CCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR GCA 90 bp GCCACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAGGGTTATCATTGTCTGTCACTaGTGGTGTCAAATCCTTGGA +
Preference number: 4 (lower is better)
Translates to: ATGHLFVAIKCLPTWGRVIIVCH*WCQILG
Trigger: TCCAAGGATTTGACACCAGCAGTGACAGACAATGAT...AACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp AGACTGAACCATGCGCTTGTGGGTGTCGAAGACATAACGCTTGAAAGTCAGGCTATCAGATCAATGATCTaGGCCCCGCCGATGATGGTC +
Preference number: 4 (lower is better)
Translates to: RLNHALVGVEDITLESQAIRSMI*APPMMV
Trigger: GACCATCATCGGCGGGGCCCAGATCATTGATCTGAT...AGCCTGACTTTCAAGCGTTATGTCTTCGACACCCACAAGCGCATGGTTCAGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483457.1
ENST00000644955.1
CDS-3UTR CCA 90 bp ACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAGGGTTGAGTTGATGGAGAAACAGTaGTCCACAGACATGAGGAAC +
Preference number: 4 (lower is better)
Translates to: TGHLFVAIKCLPTWGRVELMEKQ*STDMRN
Trigger: GTTCCTCATGTCTGTGGACCACTGTTTCTCCATCAA...CTCAACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254730.11
ENST00000644579.2
CDS-3UTR CCA 90 bp ACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAGGGTTGAGTCCAGTATAGGCTCCTaGTCAAAGTTATCTGGAGCA +
Preference number: 4 (lower is better)
Translates to: TGHLFVAIKCLPTWGRVESSIGS*SKLSGA
Trigger: TGCTCCAGATAACTTTGACCAGGAGCCTATACTGGA...CTCAACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp GGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAGGGTTGAGACTTGTGGAACATCTGCATaGACTTCACCTTCTTCACCA +
Preference number: 4 (lower is better)
Translates to: GHLFVAIKCLPTWGRVETCGTSA*TSPSSP
Trigger: TGGTGAAGAAGGTGAAGTCCATGCAGATGTTCCACA...AGTCTCAACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CCA 90 bp ACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAGGGTTGAGCTGGTCAAAGTTATCTaGAGCAGGACTGAAGAACAT +
Preference number: 4 (lower is better)
Translates to: TGHLFVAIKCLPTWGRVELVKVI*SRTEEH
Trigger: ATGTTCTTCAGTCCTGCTCCAGATAACTTTGACCAG...CTCAACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS TCA 90 bp GTCCGGATGAGGGAGGCGTGCCCGGGGCAGTCGACCAGCGTGACCTaGAGCAGTGGCTCGCCGGGCTCGGGCTCGGCCTCGGGCGCTGCC +
Preference number: 5 (lower is better)
Translates to: VRMREACPGQSTSVT*SSGSPGSGSASGAA
Trigger: GGCAGCGCCCGAGGCCGAGCCCGAGCCCGGCGAGCCACTGCTTCAGGTCACGCTGGTCGACTGCCCCGGGCACGCCTCCCTCATCCGGAC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000484438.1
ENST00000644579.2
ENST00000644955.1
ENST00000645384.1
CDS GCA 90 bp GACCTGAAGCAGTGGCTCGCCGGGCTCGGGCTCGGCCTCGGGCGCTaGCTGGAACTCGGGCAAAGACGACCGCAGGCGCGCGGGCAGCGG +
Preference number: 5 (lower is better)
Translates to: DLKQWLAGLGLGLGR*LELGQRRPQARGQR
Trigger: CCGCTGCCCGCGCGCCTGCGGTCGTCTTTGCCCGAGTTCCAGGCAGCGCCCGAGGCCGAGCCCGAGCCCGGCGAGCCACTGCTTCAGGTC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000484438.1
ENST00000644579.2
ENST00000644955.1
ENST00000645384.1
CDS CCA 90 bp GAGGGAGGCGTGCCCGGGGCAGTCGACCAGCGTGACCTGAAGCAGTaGCTCGCCGGGCTCGGGCTCGGCCTCGGGCGCTGCCTGGAACTC +
Preference number: 5 (lower is better)
Translates to: EGGVPGAVDQRDLKQ*LAGLGLGLGRCLEL
Trigger: GAGTTCCAGGCAGCGCCCGAGGCCGAGCCCGAGCCCGGCGAGCCACTGCTTCAGGTCACGCTGGTCGACTGCCCCGGGCACGCCTCCCTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000484438.1
ENST00000644579.2
ENST00000644955.1
ENST00000645384.1
CDS TCA 90 bp GCGCGGGCAGCGGCACCGAGAAGCACGAGAAGCCCAGATCGAGCGTaGTGCCGCGCTCGCGGCTCTGCGGCTGCTTGTCAAAGGCGGCGG +
Preference number: 5 (lower is better)
Translates to: ARAAAPRSTRSPDRA*CRARGSAAACQRRR
Trigger: CCGCCGCCTTTGACAAGCAGCCGCAGAGCCGCGAGCGCGGCATCACGCTCGATCTGGGCTTCTCGTGCTTCTCGGTGCCGCTGCCCGCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS GCA 90 bp CGGCGGTGGAGGCTGTGGTGCTTAGCGCCCGCGCCAGCGCCGTCTTaGCGCTGTCGATGTGGCCCAGCACGCCCACGTTCACGTTCACCC +
Preference number: 5 (lower is better)
Translates to: RRWRLWCLAPAPAPS*RCRCGPARPRSRSP
Trigger: GGGTGAACGTGAACGTGGGCGTGCTGGGCCACATCGACAGCGGCAAGACGGCGCTGGCGCGGGCGCTAAGCACCACAGCCTCCACCGCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS GCA 90 bp CGCGGCTCTGCGGCTGCTTGTCAAAGGCGGCGGTGGAGGCTGTGGTaGTTAGCGCCCGCGCCAGCGCCGTCTTGCCGCTGTCGATGTGGC +
Preference number: 5 (lower is better)
Translates to: RGSAAACQRRRWRLW*LAPAPAPSCRCRCG
Trigger: GCCACATCGACAGCGGCAAGACGGCGCTGGCGCGGGCGCTAAGCACCACAGCCTCCACCGCCGCCTTTGACAAGCAGCCGCAGAGCCGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS CCA 90 bp GTGGTGCTTAGCGCCCGCGCCAGCGCCGTCTTGCCGCTGTCGATGTaGCCCAGCACGCCCACGTTCACGTTCACCCGCCGCCCTGCCATG +
Preference number: 5 (lower is better)
Translates to: VVLSARASAVLPLSM*PSTPTFTFTRRPAM
Trigger: CATGGCAGGGCGGCGGGTGAACGTGAACGTGGGCGTGCTGGGCCACATCGACAGCGGCAAGACGGCGCTGGCGCGGGCGCTAAGCACCAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS CCA 90 bp GCTCGCGGCTCTGCGGCTGCTTGTCAAAGGCGGCGGTGGAGGCTGTaGTGCTTAGCGCCCGCGCCAGCGCCGTCTTGCCGCTGTCGATGT +
Preference number: 5 (lower is better)
Translates to: ARGSAAACQRRRWRL*CLAPAPAPSCRCRC
Trigger: ACATCGACAGCGGCAAGACGGCGCTGGCGCGGGCGCTAAGCACCACAGCCTCCACCGCCGCCTTTGACAAGCAGCCGCAGAGCCGCGAGC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS GCA 90 bp GAGAAGCCCAGATCGAGCGTGATGCCGCGCTCGCGGCTCTGCGGCTaGTTGTCAAAGGCGGCGGTGGAGGCTGTGGTGCTTAGCGCCCGC +
Preference number: 5 (lower is better)
Translates to: EKPRSSVMPRSRLCG*LSKAAVEAVVLSAR
Trigger: GCGGGCGCTAAGCACCACAGCCTCCACCGCCGCCTTTGACAAGCAGCCGCAGAGCCGCGAGCGCGGCATCACGCTCGATCTGGGCTTCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CAA 90 bp GGCTGGAGGAGAGACCCTCCTGGCCCCAGCAACCCATCCCCCTCAGCTCCTCACCGGCTCTGCGGCTGCTaGTCAAAGGCGGCGGTGGAG +
Preference number: 5 (lower is better)
Translates to: GWRRDPPGPSNPSPSAPHRLCGC*SKAAVE
Trigger: CTCCACCGCCGCCTTTGACAAGCAGCCGCAGAGCCG...GTGAGGAGCTGAGGGGGATGGGTTGCTGGGGCCAGGAGGGTCTCTCCTCCAGCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CAA 90 bp GGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCGCGCCAGCGCCGTCTaGCCGCTGTCGATGTGGCCC +
Preference number: 5 (lower is better)
Translates to: GQQMGQWKILATSPLPMARASAV*PLSMWP
Trigger: GGGCCACATCGACAGCGGCAAGACGGCGCTGGCGCG...GGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS GCA 90 bp CGAGGGCAGGTGACGGGCTTCTCAAACTCCACCAGGGCCCACTGCTaGCGAGGACAATGGCCCTCTGTGGCCTGGCCGGCCTTCTTGTCG +
Preference number: 5 (lower is better)
Translates to: RGQVTGFSNSTRAHC*RGQWPSVAWPAFLS
Trigger: CGACAAGAAGGCCGGCCAGGCCACAGAGGGCCATTGTCCTCGGCAGCAGTGGGCCCTGGTGGAGTTTGAGAAGCCCGTCACCTGCCCTCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000483569.1
ENST00000644579.2
ENST00000644955.1
ENST00000646013.1
CDS GCA 90 bp AGCCGAGGGCAGGTGACGGGCTTCTCAAACTCCACCAGGGCCCACTaGTGCCGAGGACAATGGCCCTCTGTGGCCTGGCCGGCCTTCTTG +
Preference number: 5 (lower is better)
Translates to: SRGQVTGFSNSTRAH*CRGQWPSVAWPAFL
Trigger: CAAGAAGGCCGGCCAGGCCACAGAGGGCCATTGTCCTCGGCAGCAGTGGGCCCTGGTGGAGTTTGAGAAGCCCGTCACCTGCCCTCGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000483569.1
ENST00000644579.2
ENST00000644955.1
ENST00000646013.1
CDS-3UTR CAA 90 bp TGCAGGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCGCGCCAGCGCCGTCTaGCCGCTGTCGATGTGGCCC +
Preference number: 5 (lower is better)
Translates to: CRWPTDGAVEDTGYQPSARASAV*PLSMWP
Trigger: GGGCCACATCGACAGCGGCAAGACGGCGCTGGCGCG...GGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACCTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CAA 90 bp GGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGGCTGGGCGCGCCAGCGCCGTCTaGCCGCTGTCGATGTGGCCC +
Preference number: 5 (lower is better)
Translates to: GRYWLPALCPWPFPSWAGRASAV*PLSMWP
Trigger: GGGCCACATCGACAGCGGCAAGACGGCGCTGGCGCG...CCCAGCCCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS GCA 90 bp AAGCACGAGAAGCCCAGATCGAGCGTGATGCCGCGCTCGCGGCTCTaGGGCTGCTTGTCAAAGGCGGCGGTGGAGGCTGTGGTGCTTAGC +
Preference number: 5 (lower is better)
Translates to: KHEKPRSSVMPRSRL*GCLSKAAVEAVVLS
Trigger: GCTAAGCACCACAGCCTCCACCGCCGCCTTTGACAAGCAGCCGCAGAGCCGCGAGCGCGGCATCACGCTCGATCTGGGCTTCTCGTGCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CAA 90 bp AGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTCGCGCCAGCGCCGTCTaGCCGCTGTCGATGTGGCCC +
Preference number: 5 (lower is better)
Translates to: RWGSGRYWLPALCPWPFPRASAV*PLSMWP
Trigger: GGGCCACATCGACAGCGGCAAGACGGCGCTGGCGCG...AGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CAA 90 bp GGGCTGGAGGAGAGACCCTCCTGGCCCCAGCAACCCATCCCCCTCAGCTCCTCAGCCTGGCCGGCCTTCTaGTCGGCCTCATCATTGTCT +
Preference number: 5 (lower is better)
Translates to: GLEERPSWPQQPIPLSSSAWPAF*SASSLS
Trigger: AGACAATGATGAGGCCGACAAGAAGGCCGGCCAGGC...TGAGGAGCTGAGGGGGATGGGTTGCTGGGGCCAGGAGGGTCTCTCCTCCAGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CAA 90 bp GGCTGGAGGAGAGACCCTCCTGGCCCCAGCAACCCATCCCCCTCAGCTCCTCACGGTGTCAGGATCTTCTaGGACTCGGGGCTGAGGCCA +
Preference number: 5 (lower is better)
Translates to: GWRRDPPGPSNPSPSAPHGVRIF*DSGLRP
Trigger: TGGCCTCAGCCCCGAGTCCAAGAAGATCCTGACACC...GTGAGGAGCTGAGGGGGATGGGTTGCTGGGGCCAGGAGGGTCTCTCCTCCAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CAA 90 bp GGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGGCTGGGGCCCGGGCCCGCTTCTaGAGGGCGGGTGTCAGGATC +
Preference number: 5 (lower is better)
Translates to: GRYWLPALCPWPFPSWAGARARF*RAGVRI
Trigger: GATCCTGACACCCGCCCTCAAGAAGCGGGCCCGGGC...CCCAGCCCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CAA 90 bp GGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCGGGCCCGCTTCTaGAGGGCGGGTGTCAGGATC +
Preference number: 5 (lower is better)
Translates to: GGQQMGQWKILATSPLPMARARF*RAGVRI
Trigger: GATCCTGACACCCGCCCTCAAGAAGCGGGCCCGGGC...CATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CAA 90 bp GGGCTGGAGGAGAGACCCTCCTGGCCCCAGCAACCCATCCCCCTCAGCTCCTCATGGGTCTGCATCCCCTaGGTCACATCGATGACCAGC +
Preference number: 5 (lower is better)
Translates to: GLEERPSWPQQPIPLSSSWVCIP*VTSMTS
Trigger: GCTGGTCATCGATGTGACCAAGGGGATGCAGACCCA...TGAGGAGCTGAGGGGGATGGGTTGCTGGGGCCAGGAGGGTCTCTCCTCCAGCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CAA 90 bp ACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCGCCCGGGCCCGCTTCTaGAGGGCGGGTGTCAGGATC +
Preference number: 5 (lower is better)
Translates to: TDGAVEDTGYQPSAHGPFARARF*RAGVRI
Trigger: GATCCTGACACCCGCCCTCAAGAAGCGGGCCCGGGC...GAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CAA 90 bp GGCTGGGGCCACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGCCACCTGGGGGAGGGTaGAGACTGGCCTGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: GWGHGTFICSHQVPAHLGPPGGG*RLACRW
Trigger: CCACCTGCAGGCCAGTCTCAACCCTCCCCCAGGTGG...CCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGTGGCCCCAGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS CCA 90 bp TCGGGGGCACACACCAACCCGCGCTCCAGCAGCTTAGGGTCAAACTaGGTGACGCAGATGCCCAGCCGGTCTCCTTGCATGGCTGAAGTG +
Preference number: 5 (lower is better)
Translates to: SGAHTNPRSSSLGSN*VTQMPSRSPCMAEV
Trigger: CACTTCAGCCATGCAAGGAGACCGGCTGGGCATCTGCGTCACCCAGTTTGACCCTAAGCTGCTGGAGCGCGGGTTGGTGTGTGCCCCCGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000483569.1
ENST00000484438.1
ENST00000644579.2
ENST00000644955.1
ENST00000645384.1
ENST00000646013.1
CDS CCA 90 bp TCCACCAGGGCCCACTGCTGCCGAGGACAATGGCCCTCTGTGGCCTaGCCGGCCTTCTTGTCGGCCTCATCATTGTCTGTCACTGCTGGT +
Preference number: 5 (lower is better)
Translates to: STRAHCCRGQWPSVA*PAFLSASSLSVTAG
Trigger: ACCAGCAGTGACAGACAATGATGAGGCCGACAAGAAGGCCGGCCAGGCCACAGAGGGCCATTGTCCTCGGCAGCAGTGGGCCCTGGTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000483569.1
ENST00000644579.2
ENST00000644955.1
ENST00000646013.1
CDS-3UTR CAA 90 bp GGGCTGGAGGAGAGACCCTCCTGGCCCCAGCAACCCATCCCCCTCAGCTCCTCAATGTGGATCTTGAACTaGCCGCTCTGGCCGAAGGCA +
Preference number: 5 (lower is better)
Translates to: GLEERPSWPQQPIPLSSSMWILN*PLWPKA
Trigger: TGCCTTCGGCCAGAGCGGCAAGTTCAAGATCCACAT...TGAGGAGCTGAGGGGGATGGGTTGCTGGGGCCAGGAGGGTCTCTCCTCCAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254730.11
ENST00000644579.2
CDS-3UTR CAA 90 bp GGCTGGAGGAGAGACCCTCCTGGCCCCAGCAACCCATCCCCCTCAGCTCCTCACATGTGGATCTTGAACTaGCCGCTCTGGCCGAAGGCA +
Preference number: 5 (lower is better)
Translates to: GWRRDPPGPSNPSPSAPHMWILN*PLWPKA
Trigger: TGCCTTCGGCCAGAGCGGCAAGTTCAAGATCCACAT...GTGAGGAGCTGAGGGGGATGGGTTGCTGGGGCCAGGAGGGTCTCTCCTCCAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254730.11
ENST00000644579.2
CDS-3UTR CAA 90 bp GCCACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAGGGTTGCCCGGGCCCGCTTCTaGAGGGCGGGTGTCAGGATC +
Preference number: 5 (lower is better)
Translates to: ATGHLFVAIKCLPTWGRVARARF*RAGVRI
Trigger: GATCCTGACACCCGCCCTCAAGAAGCGGGCCCGGGC...AACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CAA 90 bp GGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGCCACCTGGGGGAGGGTaGAGACTGGCCTGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: GSGRYWLPALCPWPFPSWPPGGG*RLACRW
Trigger: CCACCTGCAGGCCAGTCTCAACCCTCCCCCAGGTGG...CCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CAA 90 bp ACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCCACCTGGGGGAGGGTaGAGACTGGCCTGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: TDGAVEDTGYQPSAHGPFPPGGG*RLACRW
Trigger: CCACCTGCAGGCCAGTCTCAACCCTCCCCCAGGTGG...GAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS CCA 90 bp CAAACTCCACCAGGGCCCACTGCTGCCGAGGACAATGGCCCTCTGTaGCCTGGCCGGCCTTCTTGTCGGCCTCATCATTGTCTGTCACTG +
Preference number: 5 (lower is better)
Translates to: QTPPGPTAAEDNGPL*PGRPSCRPHHCLSL
Trigger: CAGTGACAGACAATGATGAGGCCGACAAGAAGGCCGGCCAGGCCACAGAGGGCCATTGTCCTCGGCAGCAGTGGGCCCTGGTGGAGTTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000483569.1
ENST00000644579.2
ENST00000644955.1
ENST00000646013.1
CDS-3UTR CAA 90 bp GGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGGCTGGGATGTGGAACTTGGCCTaGGTTTGCAGGGGCCCCCGG +
Preference number: 5 (lower is better)
Translates to: GRYWLPALCPWPFPSWAGMWNLA*VCRGPR
Trigger: CCGGGGGCCCCTGCAAACCAAGGCCAAGTTCCACAT...CCCAGCCCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CAA 90 bp GGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGATGTGGAACTTGGCCTaGGTTTGCAGGGGCCCCCGG +
Preference number: 5 (lower is better)
Translates to: GGQQMGQWKILATSPLPMMWNLA*VCRGPR
Trigger: CCGGGGGCCCCTGCAAACCAAGGCCAAGTTCCACAT...CATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CAA 90 bp GGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCGCCTGGCCGGCCTTCTaGTCGGCCTCATCATTGTCT +
Preference number: 5 (lower is better)
Translates to: GQQMGQWKILATSPLPMAAWPAF*SASSLS
Trigger: AGACAATGATGAGGCCGACAAGAAGGCCGGCCAGGC...GGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CAA 90 bp GGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCGGTGTCAGGATCTTCTaGGACTCGGGGCTGAGGCCA +
Preference number: 5 (lower is better)
Translates to: GQQMGQWKILATSPLPMAGVRIF*DSGLRP
Trigger: TGGCCTCAGCCCCGAGTCCAAGAAGATCCTGACACC...GGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CAA 90 bp GCCACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAGGGTTCCACCTGGGGGAGGGTaGAGACTGGCCTGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: ATGHLFVAIKCLPTWGRVPPGGG*RLACRW
Trigger: CCACCTGCAGGCCAGTCTCAACCCTCCCCCAGGTGG...AACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS TCA 90 bp CCGTGGAGCAGGATGCCATGGAAGGCTAGCCGGCACGTGTTGGTGTaGATGTCCGCATCTAGCCTGGAGCCAATCACCAGGCACAGCCGA +
Preference number: 5 (lower is better)
Translates to: PWSRMPWKASRHVLV*MSASSLEPITRHSR
Trigger: TCGGCTGTGCCTGGTGATTGGCTCCAGGCTAGATGCGGACATTCACACCAACACGTGCCGGCTAGCCTTCCATGGCATCCTGCTCCACGG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS CCA 90 bp TCGGGGCTGAGGCCACCTGGGATGTGGATCTTGAACTTGCCGCTCTaGCCGAAGGCACTGTCGATGATGCCCAGTTCCCCAGTGGACAAG +
Preference number: 5 (lower is better)
Translates to: SGLRPPGMWILNLPL*PKALSMMPSSPVDK
Trigger: CTTGTCCACTGGGGAACTGGGCATCATCGACAGTGCCTTCGGCCAGAGCGGCAAGTTCAAGATCCACATCCCAGGTGGCCTCAGCCCCGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254730.11
ENST00000644579.2
CDS-3UTR CAA 90 bp GGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCGAACTTGGCCTTGGTTaGCAGGGGCCCCCGGAAATA +
Preference number: 5 (lower is better)
Translates to: GQQMGQWKILATSPLPMAELGLG*QGPPEI
Trigger: TATTTCCGGGGGCCCCTGCAAACCAAGGCCAAGTTC...GGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CAA 90 bp AGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTATGTGGAACTTGGCCTaGGTTTGCAGGGGCCCCCGG +
Preference number: 5 (lower is better)
Translates to: RWGSGRYWLPALCPWPFPMWNLA*VCRGPR
Trigger: CCGGGGGCCCCTGCAAACCAAGGCCAAGTTCCACAT...AGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CAA 90 bp TGCAGGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCGCCTGGCCGGCCTTCTaGTCGGCCTCATCATTGTCT +
Preference number: 5 (lower is better)
Translates to: CRWPTDGAVEDTGYQPSAAWPAF*SASSLS
Trigger: AGACAATGATGAGGCCGACAAGAAGGCCGGCCAGGC...GGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CAA 90 bp GGGCTGGAGGAGAGACCCTCCTGGCCCCAGCAACCCATCCCCCTCAGCTCCTCAATGTTGGTTTCCTTTTaGAACAGGGAGCGGCCGATC +
Preference number: 5 (lower is better)
Translates to: GLEERPSWPQQPIPLSSSMLVSF*NRERPI
Trigger: GATCGGCCGCTCCCTGTTCAAAAAGGAAACCAACAT...TGAGGAGCTGAGGGGGATGGGTTGCTGGGGCCAGGAGGGTCTCTCCTCCAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000254730.11
ENST00000644579.2
CDS-3UTR CAA 90 bp TGCAGGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCGTGGACAAGTGCACCTaGAGCCCCACGAAGAGCTGG +
Preference number: 5 (lower is better)
Translates to: CRWPTDGAVEDTGYQPSAVDKCT*SPTKSW
Trigger: CCAGCTCTTCGTGGGGCTCAAGGTGCACTTGTCCAC...GGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACCTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254730.11
ENST00000644579.2
CDS GCA 90 bp GGAAGCTGTCGGCGTAGTTCCTGTCCTCTAGCCCGTGGAGCAGGATaGCATGGAAGGCTAGCCGGCACGTGTTGGTGTGAATGTCCGCAT +
Preference number: 5 (lower is better)
Translates to: GSCRRSSCPLARGAG*HGRLAGTCWCECPH
Trigger: ATGCGGACATTCACACCAACACGTGCCGGCTAGCCTTCCATGGCATCCTGCTCCACGGGCTAGAGGACAGGAACTACGCCGACAGCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS CCA 90 bp CTAGCCCGTGGAGCAGGATGCCATGGAAGGCTAGCCGGCACGTGTTaGTGTGAATGTCCGCATCTAGCCTGGAGCCAATCACCAGGCACA +
Preference number: 5 (lower is better)
Translates to: LARGAGCHGRLAGTC*CECPHLAWSQSPGT
Trigger: TGTGCCTGGTGATTGGCTCCAGGCTAGATGCGGACATTCACACCAACACGTGCCGGCTAGCCTTCCATGGCATCCTGCTCCACGGGCTAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CAA 90 bp GGCTGGGGCCACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGTGGGTCTGCATCCCCTaGGTCACATCGATGACCAGC +
Preference number: 5 (lower is better)
Translates to: GWGHGTFICSHQVPAHLGWVCIP*VTSMTS
Trigger: GCTGGTCATCGATGTGACCAAGGGGATGCAGACCCA...CCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGTGGCCCCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CAA 90 bp GGCTGGGGCCACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAACTTGGCCTTGGTTaGCAGGGGCCCCCGGAAATA +
Preference number: 5 (lower is better)
Translates to: GWGHGTFICSHQVPAHLGELGLG*QGPPEI
Trigger: TATTTCCGGGGGCCCCTGCAAACCAAGGCCAAGTTC...CCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGTGGCCCCAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CAA 90 bp TGGGCTGGGGCCACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGTGGACAAGTGCACCTaGAGCCCCACGAAGAGCTGG +
Preference number: 5 (lower is better)
Translates to: WAGATGHLFVAIKCLPTWVDKCT*SPTKSW
Trigger: CCAGCTCTTCGTGGGGCTCAAGGTGCACTTGTCCAC...CCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGTGGCCCCAGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254730.11
ENST00000644579.2
CDS-3UTR CAA 90 bp ACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCGGTGTCAGGATCTTCTaGGACTCGGGGCTGAGGCCA +
Preference number: 5 (lower is better)
Translates to: TDGAVEDTGYQPSAHGPFGVRIF*DSGLRP
Trigger: TGGCCTCAGCCCCGAGTCCAAGAAGATCCTGACACC...GAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CAA 90 bp TGGGCTGGGGCCACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGTGTCAGGATCTTCTaGGACTCGGGGCTGAGGCCA +
Preference number: 5 (lower is better)
Translates to: WAGATGHLFVAIKCLPTWGVRIF*DSGLRP
Trigger: TGGCCTCAGCCCCGAGTCCAAGAAGATCCTGACACC...CCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGTGGCCCCAGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS CCA 90 bp GCTCCACAAGGCCATGCTTGTGCTTCAGCTTGTACACCTTCAGCCTaGGCAGGAAGCTGTCGGCGTAGTTCCTGTCCTCTAGCCCGTGGA +
Preference number: 5 (lower is better)
Translates to: APQGHACASACTPSA*AGSCRRSSCPLARG
Trigger: TCCACGGGCTAGAGGACAGGAACTACGCCGACAGCTTCCTGCCCAGGCTGAAGGTGTACAAGCTGAAGCACAAGCATGGCCTTGTGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CAA 90 bp AGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTTGGGTCTGCATCCCCTaGGTCACATCGATGACCAGC +
Preference number: 5 (lower is better)
Translates to: RWGSGRYWLPALCPWPFPWVCIP*VTSMTS
Trigger: GCTGGTCATCGATGTGACCAAGGGGATGCAGACCCA...AGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CAA 90 bp GGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGGCTGGGGGTGCACCTCGGAACTaGGTGTTCTCTAGGGTCTTC +
Preference number: 5 (lower is better)
Translates to: GRYWLPALCPWPFPSWAGGAPRN*VFSRVF
Trigger: GAAGACCCTAGAGAACACCAAGTTCCGAGGTGCACC...CCCAGCCCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CAA 90 bp TGGGCTGGGGCCACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGAACTTGGCCTTGGTTaGCAGGGGCCCCCGGAAATA +
Preference number: 5 (lower is better)
Translates to: WAGATGHLFVAIKCLPTWELGLG*QGPPEI
Trigger: TATTTCCGGGGGCCCCTGCAAACCAAGGCCAAGTTC...CCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGTGGCCCCAGCCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CAA 90 bp ACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCGAACTTGGCCTTGGTTaGCAGGGGCCCCCGGAAATA +
Preference number: 5 (lower is better)
Translates to: TDGAVEDTGYQPSAHGPFELGLG*QGPPEI
Trigger: TATTTCCGGGGGCCCCTGCAAACCAAGGCCAAGTTC...GAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CAA 90 bp ACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAGGGTTGAGATGTGGAACTTGGCCTaGGTTTGCAGGGGCCCCCGG +
Preference number: 5 (lower is better)
Translates to: TGHLFVAIKCLPTWGRVEMWNLA*VCRGPR
Trigger: CCGGGGGCCCCTGCAAACCAAGGCCAAGTTCCACAT...CTCAACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CAA 90 bp GGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCTGGTGTCAAATCCTaGGACAGGTACTGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: GGQQMGQWKILATSPLPMAGVKS*DRYCSW
Trigger: CCAGGAGCAGTACCTGTCCAAGGATTTGACACCAGC...CATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CAA 90 bp GGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCGGTAAGAGGTCTATTTaGTTCAGCACCACGACCAGC +
Preference number: 5 (lower is better)
Translates to: GQQMGQWKILATSPLPMAGKRSI*FSTTTS
Trigger: GCTGGTCGTGGTGCTGAACAAAATAGACCTCTTACC...GGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CAA 90 bp AGGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGTGCACCTCGGAACTaGGTGTTCTCTAGGGTCTTC +
Preference number: 5 (lower is better)
Translates to: RWPTDGAVEDTGYQPSAHGAPRN*VFSRVF
Trigger: GAAGACCCTAGAGAACACCAAGTTCCGAGGTGCACC...ATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CAA 90 bp GGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGACAGTGCCTTGGCCTTaGATGGAGAAACAGTGGTCC +
Preference number: 5 (lower is better)
Translates to: GGQQMGQWKILATSPLPMTVPWP*MEKQWS
Trigger: GGACCACTGTTTCTCCATCAAAGGCCAAGGCACTGT...CATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254730.11
ENST00000644579.2
CDS-3UTR CAA 90 bp ACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCACCTTCTTCACCACCTaGAGGGCAGGGATCTCCACA +
Preference number: 5 (lower is better)
Translates to: TDGAVEDTGYQPSAHGPFTFFTT*RAGIST
Trigger: TGTGGAGATCCCTGCCCTCAAGGTGGTGAAGAAGGT...GAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254730.11
ENST00000644579.2
CDS-3UTR CAA 90 bp GGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGACTGTAATGTGGAACTaGGCCTTGGTTTGCAGGGGC +
Preference number: 5 (lower is better)
Translates to: GGQQMGQWKILATSPLPMTVMWN*ALVCRG
Trigger: GCCCCTGCAAACCAAGGCCAAGTTCCACATTACAGT...CATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CAA 90 bp AGGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGCTGGTGTCAAATCCTaGGACAGGTACTGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: RWPTDGAVEDTGYQPSAHAGVKS*DRYCSW
Trigger: CCAGGAGCAGTACCTGTCCAAGGATTTGACACCAGC...ATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CAA 90 bp ACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAGGGTTGAGGCCTGGCCGGCCTTCTaGTCGGCCTCATCATTGTCT +
Preference number: 5 (lower is better)
Translates to: TGHLFVAIKCLPTWGRVEAWPAF*SASSLS
Trigger: AGACAATGATGAGGCCGACAAGAAGGCCGGCCAGGC...CTCAACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CAA 90 bp GGCTGGGGCCACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGTCCACAAGGCCATGCTaGTGCTTCAGCTTGTACACC +
Preference number: 5 (lower is better)
Translates to: GWGHGTFICSHQVPAHLGSTRPC*CFSLYT
Trigger: GGTGTACAAGCTGAAGCACAAGCATGGCCTTGTGGA...CCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGTGGCCCCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CAA 90 bp TGCAGGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCTCCACAAGGCCATGCTaGTGCTTCAGCTTGTACACC +
Preference number: 5 (lower is better)
Translates to: CRWPTDGAVEDTGYQPSASTRPC*CFSLYT
Trigger: GGTGTACAAGCTGAAGCACAAGCATGGCCTTGTGGA...GGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS TCA 90 bp GACCAGCTTCTGGCAGGCAATCTGGCCGATCACAAGGCATTCCGCTaGCTGGGTCTGCATCCCCTTGGTCACATCGATGACCAGCATCAT +
Preference number: 5 (lower is better)
Translates to: DQLLAGNLADHKAFR*LGLHPLGHIDDQHH
Trigger: ATGATGCTGGTCATCGATGTGACCAAGGGGATGCAGACCCAGTCAGCGGAATGCCTTGTGATCGGCCAGATTGCCTGCCAGAAGCTGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000484438.1
ENST00000644579.2
ENST00000644955.1
ENST00000645384.1
CDS TCA 90 bp CTTGAGGGCAGGGATCTCCACACTGTCACCGAGGCTGATGGAGCCTaGAAGGATGGTCCCTGTCATCACAGTGCCTTGGCCTTTGATGGA +
Preference number: 5 (lower is better)
Translates to: LEGRDLHTVTEADGA*KDGPCHHSALAFDG
Trigger: TCCATCAAAGGCCAAGGCACTGTGATGACAGGGACCATCCTTTCAGGCTCCATCAGCCTCGGTGACAGTGTGGAGATCCCTGCCCTCAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254730.11
ENST00000644579.2
CDS CCA 90 bp ATGGTCCCTGTCATCACAGTGCCTTGGCCTTTGATGGAGAAACAGTaGTCCACAGACATGAGGAACGGTCCCGAGGGGTCTCTCGTTGGG +
Preference number: 5 (lower is better)
Translates to: MVPVITVPWPLMEKQ*STDMRNGPEGSLVG
Trigger: CCCAACGAGAGACCCCTCGGGACCGTTCCTCATGTCTGTGGACCACTGTTTCTCCATCAAAGGCCAAGGCACTGTGATGACAGGGACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644579.2
CDS-3UTR CAA 90 bp GGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGGCTGGGGGTAAGAGGTCTATTTaGTTCAGCACCACGACCAGC +
Preference number: 5 (lower is better)
Translates to: GRYWLPALCPWPFPSWAGGKRSI*FSTTTS
Trigger: GCTGGTCGTGGTGCTGAACAAAATAGACCTCTTACC...CCCAGCCCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CAA 90 bp GGGCTGGAGGAGAGACCCTCCTGGCCCCAGCAACCCATCCCCCTCAGCTCCTCATGGTCATTTTATCAATaGCTGCCTGTCTCTTTCCTT +
Preference number: 5 (lower is better)
Translates to: GLEERPSWPQQPIPLSSSWSFYQ*LPVSFL
Trigger: AAGGAAAGAGACAGGCAGCAATTGATAAAATGACCA...TGAGGAGCTGAGGGGGATGGGTTGCTGGGGCCAGGAGGGTCTCTCCTCCAGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CAA 90 bp TGGGCTGGGGCCACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGACAGTGCCTTGGCCTTaGATGGAGAAACAGTGGTCC +
Preference number: 5 (lower is better)
Translates to: WAGATGHLFVAIKCLPTWTVPWP*MEKQWS
Trigger: GGACCACTGTTTCTCCATCAAAGGCCAAGGCACTGT...CCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGTGGCCCCAGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254730.11
ENST00000644579.2
CDS-3UTR CAA 90 bp AGGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATACTGTAATGTGGAACTaGGCCTTGGTTTGCAGGGGC +
Preference number: 5 (lower is better)
Translates to: RWPTDGAVEDTGYQPSAHTVMWN*ALVCRG
Trigger: GCCCCTGCAAACCAAGGCCAAGTTCCACATTACAGT...ATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CAA 90 bp GCCACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAGGGTTGCTGGTGTCAAATCCTaGGACAGGTACTGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: ATGHLFVAIKCLPTWGRVAGVKS*DRYCSW
Trigger: CCAGGAGCAGTACCTGTCCAAGGATTTGACACCAGC...AACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CAA 90 bp AGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTTTGTCGGCCTCATCATaGTCTGTCACTGCTGGTGTC +
Preference number: 5 (lower is better)
Translates to: RWGSGRYWLPALCPWPFPLSASS*SVTAGV
Trigger: GACACCAGCAGTGACAGACAATGATGAGGCCGACAA...AGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CAA 90 bp AGGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATTTGTCGGCCTCATCATaGTCTGTCACTGCTGGTGTC +
Preference number: 5 (lower is better)
Translates to: RWPTDGAVEDTGYQPSAHLSASS*SVTAGV
Trigger: GACACCAGCAGTGACAGACAATGATGAGGCCGACAA...ATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CAA 90 bp GTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGGCTGTTGTCGGCCTCATCATaGTCTGTCACTGCTGGTGTC +
Preference number: 5 (lower is better)
Translates to: VEDTGYQPSAHGPFLVGLLSASS*SVTAGV
Trigger: GACACCAGCAGTGACAGACAATGATGAGGCCGACAA...CAGCCCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CAA 90 bp ACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCTCCACAAGGCCATGCTaGTGCTTCAGCTTGTACACC +
Preference number: 5 (lower is better)
Translates to: TDGAVEDTGYQPSAHGPFSTRPC*CFSLYT
Trigger: GGTGTACAAGCTGAAGCACAAGCATGGCCTTGTGGA...GAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CAA 90 bp TGGGCTGGGGCCACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGTCCACAAGGCCATGCTaGTGCTTCAGCTTGTACACC +
Preference number: 5 (lower is better)
Translates to: WAGATGHLFVAIKCLPTWSTRPC*CFSLYT
Trigger: GGTGTACAAGCTGAAGCACAAGCATGGCCTTGTGGA...CCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGTGGCCCCAGCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS GCA 90 bp AGCTTAGGGTCAAACTGGGTGACGCAGATGCCCAGCCGGTCTCCTTaGATGGCTGAAGTGATGGGCATGTGGAACATCTGCATGGACTTC +
Preference number: 5 (lower is better)
Translates to: SLGSNWVTQMPSRSP*MAEVMGMWNICMDF
Trigger: GAAGTCCATGCAGATGTTCCACATGCCCATCACTTCAGCCATGCAAGGAGACCGGCTGGGCATCTGCGTCACCCAGTTTGACCCTAAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000483569.1
ENST00000484438.1
ENST00000644579.2
ENST00000644955.1
ENST00000645384.1
ENST00000646013.1
CDS CCA 90 bp AGCTTCTGGCAGGCAATCTGGCCGATCACAAGGCATTCCGCTGACTaGGTCTGCATCCCCTTGGTCACATCGATGACCAGCATCATCAGA +
Preference number: 5 (lower is better)
Translates to: SFWQAIWPITRHSAD*VCIPLVTSMTSIIR
Trigger: TCTGATGATGCTGGTCATCGATGTGACCAAGGGGATGCAGACCCAGTCAGCGGAATGCCTTGTGATCGGCCAGATTGCCTGCCAGAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000484438.1
ENST00000644579.2
ENST00000644955.1
ENST00000645384.1
CDS CCA 90 bp AGGTCTATTTTGTTCAGCACCACGACCAGCTTCTGGCAGGCAATCTaGCCGATCACAAGGCATTCCGCTGACTGGGTCTGCATCCCCTTG +
Preference number: 5 (lower is better)
Translates to: RSILFSTTTSFWQAI*PITRHSADWVCIPL
Trigger: CAAGGGGATGCAGACCCAGTCAGCGGAATGCCTTGTGATCGGCCAGATTGCCTGCCAGAAGCTGGTCGTGGTGCTGAACAAAATAGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000484438.1
ENST00000644579.2
ENST00000644955.1
ENST00000645384.1
CDS CCA 90 bp ATGGTCCCTGTCATCACAGTGCCTTGGCCTTTGATGGAGAAACAGTaGTCCACAGACATGAGGAACGGTCCCGAGGGATCTCTCGTTGGG +
Preference number: 5 (lower is better)
Translates to: MVPVITVPWPLMEKQ*STDMRNGPEGSLVG
Trigger: CCCAACGAGAGATCCCTCGGGACCGTTCCTCATGTCTGTGGACCACTGTTTCTCCATCAAAGGCCAAGGCACTGTGATGACAGGGACCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254730.11
CDS CCA 90 bp ACAGTGGTCCACAGACATGAGGAACGGTCCCGAGGGGTCTCTCGTTaGGATGGAAATCTGGGACGTCAGGAGCTCAATGAGCTCTGGAAT +
Preference number: 5 (lower is better)
Translates to: TVVHRHEERSRGVSR*DGNLGRQELNELWN
Trigger: ATTCCAGAGCTCATTGAGCTCCTGACGTCCCAGATTTCCATCCCAACGAGAGACCCCTCGGGACCGTTCCTCATGTCTGTGGACCACTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644579.2
CDS-3UTR CAA 90 bp ACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAGGGTTGAGGGTGCACCTCGGAACTaGGTGTTCTCTAGGGTCTTC +
Preference number: 5 (lower is better)
Translates to: TGHLFVAIKCLPTWGRVEGAPRN*VFSRVF
Trigger: GAAGACCCTAGAGAACACCAAGTTCCGAGGTGCACC...CTCAACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CAA 90 bp GGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAGGGTTGAGACTCCGAGGGATCTCTCGTaGGGATGGAAATCTGGGACG +
Preference number: 5 (lower is better)
Translates to: GHLFVAIKCLPTWGRVETPRDLS*GWKSGT
Trigger: CGTCCCAGATTTCCATCCCAACGAGAGATCCCTCGG...AGTCTCAACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000254730.11
CDS-3UTR CAA 90 bp ACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAGGGTTGAGACCTTCTTCACCACCTaGAGGGCAGGGATCTCCACA +
Preference number: 5 (lower is better)
Translates to: TGHLFVAIKCLPTWGRVETFFTT*RAGIST
Trigger: TGTGGAGATCCCTGCCCTCAAGGTGGTGAAGAAGGT...CTCAACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000254730.11
ENST00000644579.2
CDS GCA 90 bp TGTGGCCTGGCCGGCCTTCTTGTCGGCCTCATCATTGTCTGTCACTaGTGGTGTCAAATCCTTGGACAGGTACTGCTCCTGGAAAAGGTA +
Preference number: 5 (lower is better)
Translates to: CGLAGLLVGLIIVCH*WCQILGQVLLLEKV
Trigger: TACCTTTTCCAGGAGCAGTACCTGTCCAAGGATTTGACACCAGCAGTGACAGACAATGATGAGGCCGACAAGAAGGCCGGCCAGGCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000483569.1
ENST00000644579.2
ENST00000644955.1
ENST00000646013.1
CDS CCA 90 bp CCTTCAGGTAAGAGGTCTATTTTGTTCAGCACCACGACCAGCTTCTaGCAGGCAATCTGGCCGATCACAAGGCATTCCGCTGACTGGGTC +
Preference number: 5 (lower is better)
Translates to: PSGKRSILFSTTTSF*QAIWPITRHSADWV
Trigger: GACCCAGTCAGCGGAATGCCTTGTGATCGGCCAGATTGCCTGCCAGAAGCTGGTCGTGGTGCTGAACAAAATAGACCTCTTACCTGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000484438.1
ENST00000644579.2
ENST00000644955.1
ENST00000645384.1
CDS CCA 90 bp ACAGTGGTCCACAGACATGAGGAACGGTCCCGAGGGATCTCTCGTTaGGATGGAAATCTGGGACGTCAGGAGCTCAATGAGCTCTGGAAT +
Preference number: 5 (lower is better)
Translates to: TVVHRHEERSRGISR*DGNLGRQELNELWN
Trigger: ATTCCAGAGCTCATTGAGCTCCTGACGTCCCAGATTTCCATCCCAACGAGAGATCCCTCGGGACCGTTCCTCATGTCTGTGGACCACTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254730.11
CDS CCA 90 bp GGCCTGGCCGGCCTTCTTGTCGGCCTCATCATTGTCTGTCACTGCTaGTGTCAAATCCTTGGACAGGTACTGCTCCTGGAAAAGGTATTC +
Preference number: 5 (lower is better)
Translates to: GLAGLLVGLIIVCHC*CQILGQVLLLEKVF
Trigger: GAATACCTTTTCCAGGAGCAGTACCTGTCCAAGGATTTGACACCAGCAGTGACAGACAATGATGAGGCCGACAAGAAGGCCGGCCAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000483569.1
ENST00000644579.2
ENST00000644955.1
ENST00000646013.1
CDS-3UTR CAA 90 bp ACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCTGTCATCACAGTGCCTaGGCCTTTGATGGAGAAACA +
Preference number: 5 (lower is better)
Translates to: TDGAVEDTGYQPSAHGPFCHHSA*AFDGET
Trigger: TGTTTCTCCATCAAAGGCCAAGGCACTGTGATGACA...GAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254730.11
ENST00000644579.2
CDS-3UTR CAA 90 bp GTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTAGTTGGGCTGTGTCATCACAGTGCCTaGGCCTTTGATGGAGAAACA +
Preference number: 5 (lower is better)
Translates to: VEDTGYQPSAHGPFLVGLCHHSA*AFDGET
Trigger: TGTTTCTCCATCAAAGGCCAAGGCACTGTGATGACA...CAGCCCAACTAGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254730.11
ENST00000644579.2
CDS-3UTR CAA 90 bp ACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAGGGTTGAGACTGTAATGTGGAACTaGGCCTTGGTTTGCAGGGGC +
Preference number: 5 (lower is better)
Translates to: TGHLFVAIKCLPTWGRVETVMWN*ALVCRG
Trigger: GCCCCTGCAAACCAAGGCCAAGTTCCACATTACAGT...CTCAACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CAA 90 bp ACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAGGGTTGAGTTGTCGGCCTCATCATaGTCTGTCACTGCTGGTGTC +
Preference number: 5 (lower is better)
Translates to: TGHLFVAIKCLPTWGRVELSASS*SVTAGV
Trigger: GACACCAGCAGTGACAGACAATGATGAGGCCGACAA...CTCAACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CAA 90 bp GGTGGCCAACAGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGACGAAGAGCTGGATGTaGGTTTCCTTTTTGAACAGG +
Preference number: 5 (lower is better)
Translates to: GGQQMGQWKILATSPLPMTKSWM*VSFLNR
Trigger: CCTGTTCAAAAAGGAAACCAACATCCAGCTCTTCGT...CATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCTGTTGGCCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254730.11
ENST00000644579.2
CDS TCA 90 bp AATAACTCACTCCTCAAACATTCGCTAATGTCCACGGGGCGCAGCTaGGGTGGCGCACGCACATTCTCTCAACACGTGGGTAGCAACCTT +
Preference number: 5 (lower is better)
Translates to: NNSLLKHSLMSTGRS*GGARTFSQHVGSNL
Trigger: AAGGTTGCTACCCACGTGTTGAGAGAATGTGCGTGCGCCACCTCAGCTGCGCCCCGTGGACATTAGCGAATGTTTGAGGAGTGAGTTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483569.1
ENST00000646013.1
CDS CCA 90 bp AGGCTGATGGAGCCTGAAAGGATGGTCCCTGTCATCACAGTGCCTTaGCCTTTGATGGAGAAACAGTGGTCCACAGACATGAGGAACGGT +
Preference number: 5 (lower is better)
Translates to: RLMEPERMVPVITVP*PLMEKQWSTDMRNG
Trigger: ACCGTTCCTCATGTCTGTGGACCACTGTTTCTCCATCAAAGGCCAAGGCACTGTGATGACAGGGACCATCCTTTCAGGCTCCATCAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254730.11
ENST00000644579.2
CDS CCA 90 bp AAGAACATCAACCGGCCCATGACTGTTTCATGGCCCACTGTAATGTaGAACTTGGCCTTGGTTTGCAGGGGCCCCCGGAAATACGGTATC +
Preference number: 5 (lower is better)
Translates to: KNINRPMTVSWPTVM*NLALVCRGPRKYGI
Trigger: GATACCGTATTTCCGGGGGCCCCTGCAAACCAAGGCCAAGTTCCACATTACAGTGGGCCATGAAACAGTCATGGGCCGGTTGATGTTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000483569.1
ENST00000484438.1
ENST00000644579.2
ENST00000644955.1
ENST00000645384.1
ENST00000646013.1
CDS-3UTR CAA 90 bp GGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAGGGTTGAGACTACTGTAATGTGGAACTaGGCCTTGGTTTGCAGGGGC +
Preference number: 5 (lower is better)
Translates to: GHLFVAIKCLPTWGRVETTVMWN*ALVCRG
Trigger: GCCCCTGCAAACCAAGGCCAAGTTCCACATTACAGT...AGTCTCAACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CAA 90 bp ACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGGGGAGGGTTGAGATGTTGGTTTCCTTTTaGAACAGGGAGCGGCCGATC +
Preference number: 5 (lower is better)
Translates to: TGHLFVAIKCLPTWGRVEMLVSF*NRERPI
Trigger: GATCGGCCGCTCCCTGTTCAAAAAGGAAACCAACAT...CTCAACCCTCCCCCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254730.11
ENST00000644579.2
CDS-3UTR CAA 90 bp AGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTACGAAGAGCTGGATGTaGGTTTCCTTTTTGAACAGG +
Preference number: 5 (lower is better)
Translates to: RWGSGRYWLPALCPWPFPTKSWM*VSFLNR
Trigger: CCTGTTCAAAAAGGAAACCAACATCCAGCTCTTCGT...AGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254730.11
ENST00000644579.2
CDS-3UTR CAA 90 bp AGACTGAACCATGCGCTTGTGGGTGTCGAAGACATAACGCTTGAAAGTCAGGCTGGTGCACCTCGGAACTaGGTGTTCTCTAGGGTCTTC +
Preference number: 5 (lower is better)
Translates to: RLNHALVGVEDITLESQAGAPRN*VFSRVF
Trigger: GAAGACCCTAGAGAACACCAAGTTCCGAGGTGCACC...AGCCTGACTTTCAAGCGTTATGTCTTCGACACCCACAAGCGCATGGTTCAGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483457.1
ENST00000644955.1
CDS-3UTR CAA 90 bp AGATGGGGCAGTGGAAGATACTGGCTACCAGCCCTCTGCCCATGGCCCTTTCCTTGGTCATTTTATCAATaGCTGCCTGTCTCTTTCCTT +
Preference number: 5 (lower is better)
Translates to: RWGSGRYWLPALCPWPFPWSFYQ*LPVSFL
Trigger: AAGGAAAGAGACAGGCAGCAATTGATAAAATGACCA...AGGAAAGGGCCATGGGCAGAGGGCTGGTAGCCAGTATCTTCCACTGCCCCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS-3UTR CAA 90 bp TGGGCTGGGGCCACGGGACATTTATTTGTAGCCATCAAGTGCCTGCCCACCTGGTGGTCATTTTATCAATaGCTGCCTGTCTCTTTCCTT +
Preference number: 5 (lower is better)
Translates to: WAGATGHLFVAIKCLPTWWSFYQ*LPVSFL
Trigger: AAGGAAAGAGACAGGCAGCAATTGATAAAATGACCA...CCAGGTGGGCAGGCACTTGATGGCTACAAATAAATGTCCCGTGGCCCCAGCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS CCA 90 bp AGAGAAGTTGAAAGAGTCCAGTATAGGCTCCTGGTCAAAGTTATCTaGAGCAGGACTGAAGAACATCAACCGGCCCATGACTGTTTCATG +
Preference number: 5 (lower is better)
Translates to: REVERVQYRLLVKVI*SRTEEHQPAHDCFM
Trigger: CATGAAACAGTCATGGGCCGGTTGATGTTCTTCAGTCCTGCTCCAGATAACTTTGACCAGGAGCCTATACTGGACTCTTTCAACTTCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000483569.1
ENST00000644579.2
ENST00000644955.1
ENST00000646013.1
CDS TCA 90 bp GGTGTCAAATCCTTGGACAGGTACTGCTCCTGGAAAAGGTATTCTTaGGAGAAGTTGAAAGAGTCCAGTATAGGCTCCTGGTCAAAGTTA +
Preference number: 5 (lower is better)
Translates to: GVKSLDRYCSWKRYS*EKLKESSIGSWSKL
Trigger: TAACTTTGACCAGGAGCCTATACTGGACTCTTTCAACTTCTCTCAAGAATACCTTTTCCAGGAGCAGTACCTGTCCAAGGATTTGACACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000483569.1
ENST00000644579.2
ENST00000644955.1
ENST00000646013.1
CDS CCA 72 bp GGCTCGCCGGGCTCGGGCTCGGCCTCGGGCGCTGCCTaGAACTCGGGCAAAGACGACCGCAGGCGCGCGGGC +
Preference number: 6 (lower is better)
Translates to: GSPGSGSASGAA*NSGKDDRRRAG
Trigger: GCCCGCGCGCCTGCGGTCGTCTTTGCCCGAGTTCCAGGCAGCGCCCGAGGCCGAGCCCGAGCCCGGCGAGCC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000484438.1
ENST00000644579.2
ENST00000644955.1
ENST00000645384.1
CDS GCA 72 bp CAGTGGCTCGCCGGGCTCGGGCTCGGCCTCGGGCGCTaGCTGGAACTCGGGCAAAGACGACCGCAGGCGCGC +
Preference number: 6 (lower is better)
Translates to: QWLAGLGLGLGR*LELGQRRPQAR
Trigger: GCGCGCCTGCGGTCGTCTTTGCCCGAGTTCCAGGCAGCGCCCGAGGCCGAGCCCGAGCCCGGCGAGCCACTG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000484438.1
ENST00000644579.2
ENST00000644955.1
ENST00000645384.1
CDS CCA 72 bp GTGCCCGGGGCAGTCGACCAGCGTGACCTGAAGCAGTaGCTCGCCGGGCTCGGGCTCGGCCTCGGGCGCTGC +
Preference number: 6 (lower is better)
Translates to: VPGAVDQRDLKQ*LAGLGLGLGRC
Trigger: GCAGCGCCCGAGGCCGAGCCCGAGCCCGGCGAGCCACTGCTTCAGGTCACGCTGGTCGACTGCCCCGGGCAC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000484438.1
ENST00000644579.2
ENST00000644955.1
ENST00000645384.1
CDS TCA 72 bp AGGGAGGCGTGCCCGGGGCAGTCGACCAGCGTGACCTaGAGCAGTGGCTCGCCGGGCTCGGGCTCGGCCTCG +
Preference number: 6 (lower is better)
Translates to: REACPGQSTSVT*SSGSPGSGSAS
Trigger: CGAGGCCGAGCCCGAGCCCGGCGAGCCACTGCTTCAGGTCACGCTGGTCGACTGCCCCGGGCACGCCTCCCT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000484438.1
ENST00000644579.2
ENST00000644955.1
ENST00000645384.1
CDS CCA 72 bp AGCGCCCGCGCCAGCGCCGTCTTGCCGCTGTCGATGTaGCCCAGCACGCCCACGTTCACGTTCACCCGCCGC +
Preference number: 6 (lower is better)
Translates to: SARASAVLPLSM*PSTPTFTFTRR
Trigger: GCGGCGGGTGAACGTGAACGTGGGCGTGCTGGGCCACATCGACAGCGGCAAGACGGCGCTGGCGCGGGCGCT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS CCA 72 bp GCTCGCGGCTCTGCGGCTGCTTGTCAAAGGCGGCGGTaGAGGCTGTGGTGCTTAGCGCCCGCGCCAGCGCCG +
Preference number: 6 (lower is better)
Translates to: ARGSAAACQRRR*RLWCLAPAPAP
Trigger: CGGCGCTGGCGCGGGCGCTAAGCACCACAGCCTCCACCGCCGCCTTTGACAAGCAGCCGCAGAGCCGCGAGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS CAA 90 bp GCGGCGGTGGAGGCTGTGGTGCTTAGCGCCCGCGCCAGCGCCGTCTaGCCGCTGTCGATGTGGCCCAGCACGCCCACGTTCACGTTCACC +
Preference number: 6 (lower is better)
Translates to: AAVEAVVLSARASAV*PLSMWPSTPTFTFT
Trigger: GGTGAACGTGAACGTGGGCGTGCTGGGCCACATCGACAGCGGCAAGACGGCGCTGGCGCGGGCGCTAAGCACCACAGCCTCCACCGCCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS GCA 72 bp GCGGCTGCTTGTCAAAGGCGGCGGTGGAGGCTGTGGTaGTTAGCGCCCGCGCCAGCGCCGTCTTGCCGCTGT +
Preference number: 6 (lower is better)
Translates to: AAACQRRRWRLW*LAPAPAPSCRC
Trigger: ACAGCGGCAAGACGGCGCTGGCGCGGGCGCTAAGCACCACAGCCTCCACCGCCGCCTTTGACAAGCAGCCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS CCA 72 bp TCTGCGGCTGCTTGTCAAAGGCGGCGGTGGAGGCTGTaGTGCTTAGCGCCCGCGCCAGCGCCGTCTTGCCGC +
Preference number: 6 (lower is better)
Translates to: SAAACQRRRWRL*CLAPAPAPSCR
Trigger: GCGGCAAGACGGCGCTGGCGCGGGCGCTAAGCACCACAGCCTCCACCGCCGCCTTTGACAAGCAGCCGCAGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS CAA 72 bp GAGGCTGTGGTGCTTAGCGCCCGCGCCAGCGCCGTCTaGCCGCTGTCGATGTGGCCCAGCACGCCCACGTTC +
Preference number: 6 (lower is better)
Translates to: EAVVLSARASAV*PLSMWPSTPTF
Trigger: GAACGTGGGCGTGCTGGGCCACATCGACAGCGGCAAGACGGCGCTGGCGCGGGCGCTAAGCACCACAGCCTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS CAA 72 bp CTGGTGGCCTCCCCACGGCCAGCCCGGGCCCGCTTCTaGAGGGCGGGTGTCAGGATCTTCTTGGACTCGGGG +
Preference number: 6 (lower is better)
Translates to: LVASPRPARARF*RAGVRIFLDSG
Trigger: CCCCGAGTCCAAGAAGATCCTGACACCCGCCCTCAAGAAGCGGGCCCGGGCTGGCCGTGGGGAGGCCACCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS CAA 90 bp AAGCCCAGATCGAGCGTGATGCCGCGCTCGCGGCTCTGCGGCTGCTaGTCAAAGGCGGCGGTGGAGGCTGTGGTGCTTAGCGCCCGCGCC +
Preference number: 6 (lower is better)
Translates to: KPRSSVMPRSRLCGC*SKAAVEAVVLSARA
Trigger: GGCGCGGGCGCTAAGCACCACAGCCTCCACCGCCGCCTTTGACAAGCAGCCGCAGAGCCGCGAGCGCGGCATCACGCTCGATCTGGGCTT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS GCA 72 bp AGGCTGTGGTGCTTAGCGCCCGCGCCAGCGCCGTCTTaGCGCTGTCGATGTGGCCCAGCACGCCCACGTTCA +
Preference number: 6 (lower is better)
Translates to: RLWCLAPAPAPS*RCRCGPARPRS
Trigger: TGAACGTGGGCGTGCTGGGCCACATCGACAGCGGCAAGACGGCGCTGGCGCGGGCGCTAAGCACCACAGCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS GCA 72 bp AAGCCCAGATCGAGCGTGATGCCGCGCTCGCGGCTCTaGGGCTGCTTGTCAAAGGCGGCGGTGGAGGCTGTG +
Preference number: 6 (lower is better)
Translates to: KPRSSVMPRSRL*GCLSKAAVEAV
Trigger: CACAGCCTCCACCGCCGCCTTTGACAAGCAGCCGCAGAGCCGCGAGCGCGGCATCACGCTCGATCTGGGCTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS CAA 72 bp TCGAGCGTGATGCCGCGCTCGCGGCTCTGCGGCTGCTaGTCAAAGGCGGCGGTGGAGGCTGTGGTGCTTAGC +
Preference number: 6 (lower is better)
Translates to: SSVMPRSRLCGC*SKAAVEAVVLS
Trigger: GCTAAGCACCACAGCCTCCACCGCCGCCTTTGACAAGCAGCCGCAGAGCCGCGAGCGCGGCATCACGCTCGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS CAA 72 bp CGGGCCCGCTTCTTGAGGGCGGGTGTCAGGATCTTCTaGGACTCGGGGCTGAGGCCACCCGCTCCACAAGGC +
Preference number: 6 (lower is better)
Translates to: RARFLRAGVRIF*DSGLRPPAPQG
Trigger: GCCTTGTGGAGCGGGTGGCCTCAGCCCCGAGTCCAAGAAGATCCTGACACCCGCCCTCAAGAAGCGGGCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483457.1
ENST00000644955.1
CDS TCA 72 bp GCGGCACCGAGAAGCACGAGAAGCCCAGATCGAGCGTaGTGCCGCGCTCGCGGCTCTGCGGCTGCTTGTCAA +
Preference number: 6 (lower is better)
Translates to: AAPRSTRSPDRA*CRARGSAAACQ
Trigger: TTGACAAGCAGCCGCAGAGCCGCGAGCGCGGCATCACGCTCGATCTGGGCTTCTCGTGCTTCTCGGTGCCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS GCA 72 bp AGATCGAGCGTGATGCCGCGCTCGCGGCTCTGCGGCTaGTTGTCAAAGGCGGCGGTGGAGGCTGTGGTGCTT +
Preference number: 6 (lower is better)
Translates to: RSSVMPRSRLCG*LSKAAVEAVVL
Trigger: AAGCACCACAGCCTCCACCGCCGCCTTTGACAAGCAGCCGCAGAGCCGCGAGCGCGGCATCACGCTCGATCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS CCA 72 bp CCAGGGCCCACTGCTGCCGAGGACAATGGCCCTCTGTaGCCTGGCCGGCCTTCTTGTCGGCCTCATCATTGT +
Preference number: 6 (lower is better)
Translates to: PGPTAAEDNGPL*PGRPSCRPHHC
Trigger: ACAATGATGAGGCCGACAAGAAGGCCGGCCAGGCCACAGAGGGCCATTGTCCTCGGCAGCAGTGGGCCCTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000483569.1
ENST00000644579.2
ENST00000644955.1
ENST00000646013.1
CDS CAA 72 bp CGGGCCCGCTTCTTGAGGGCGGGTGTCAGGATCTTCTaGGACTCGGGGCTGAGGCCACCTGGGATGTGGATC +
Preference number: 6 (lower is better)
Translates to: RARFLRAGVRIF*DSGLRPPGMWI
Trigger: GATCCACATCCCAGGTGGCCTCAGCCCCGAGTCCAAGAAGATCCTGACACCCGCCCTCAAGAAGCGGGCCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254730.11
ENST00000644579.2
CDS CCA 72 bp GCCCACTGCTGCCGAGGACAATGGCCCTCTGTGGCCTaGCCGGCCTTCTTGTCGGCCTCATCATTGTCTGTC +
Preference number: 6 (lower is better)
Translates to: AHCCRGQWPSVA*PAFLSASSLSV
Trigger: GACAGACAATGATGAGGCCGACAAGAAGGCCGGCCAGGCCACAGAGGGCCATTGTCCTCGGCAGCAGTGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000483569.1
ENST00000644579.2
ENST00000644955.1
ENST00000646013.1
CDS CCA 72 bp CACACCAACCCGCGCTCCAGCAGCTTAGGGTCAAACTaGGTGACGCAGATGCCCAGCCGGTCTCCTTGCATG +
Preference number: 6 (lower is better)
Translates to: HTNPRSSSLGSN*VTQMPSRSPCM
Trigger: CATGCAAGGAGACCGGCTGGGCATCTGCGTCACCCAGTTTGACCCTAAGCTGCTGGAGCGCGGGTTGGTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000483569.1
ENST00000484438.1
ENST00000644579.2
ENST00000644955.1
ENST00000645384.1
ENST00000646013.1
CDS CAA 72 bp TCGGGGCTGAGGCCACCTGGGATGTGGATCTTGAACTaGCCGCTCTGGCCGAAGGCACTGTCGATGATGCCC +
Preference number: 6 (lower is better)
Translates to: SGLRPPGMWILN*PLWPKALSMMP
Trigger: GGGCATCATCGACAGTGCCTTCGGCCAGAGCGGCAAGTTCAAGATCCACATCCCAGGTGGCCTCAGCCCCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254730.11
ENST00000644579.2
CDS CAA 72 bp GCCACCCGCTCCACAAGGCCATGCTTGTGCTTCAGCTaGTACACCTTCAGCCTGGGCAGGAAGCTGTCGGCG +
Preference number: 6 (lower is better)
Translates to: ATRSTRPCLCFS*YTFSLGRKLSA
Trigger: CGCCGACAGCTTCCTGCCCAGGCTGAAGGTGTACAAGCTGAAGCACAAGCATGGCCTTGTGGAGCGGGTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483457.1
ENST00000644955.1
CDS GCA 72 bp CGGCGTAGTTCCTGTCCTCTAGCCCGTGGAGCAGGATaGCATGGAAGGCTAGCCGGCACGTGTTGGTGTGAA +
Preference number: 6 (lower is better)
Translates to: RRSSCPLARGAG*HGRLAGTCWCE
Trigger: TTCACACCAACACGTGCCGGCTAGCCTTCCATGGCATCCTGCTCCACGGGCTAGAGGACAGGAACTACGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS CCA 72 bp GCAGCTGAGGTGGCGCACGCACATTCTCTCAACACGTaGGTAGCAACCTTCTCTCAGGACCAGGCCCAGGCT +
Preference number: 6 (lower is better)
Translates to: AAEVAHAHSLNT*VATFSQDQAQA
Trigger: AGCCTGGGCCTGGTCCTGAGAGAAGGTTGCTACCCACGTGTTGAGAGAATGTGCGTGCGCCACCTCAGCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000483569.1
ENST00000646013.1
CDS CAA 72 bp CGAGGACAATGGCCCTCTGTGGCCTGGCCGGCCTTCTaGTCGGCCTCATCATTGTCTGTCACTGCTGGTGTC +
Preference number: 6 (lower is better)
Translates to: RGQWPSVAWPAF*SASSLSVTAGV
Trigger: GACACCAGCAGTGACAGACAATGATGAGGCCGACAAGAAGGCCGGCCAGGCCACAGAGGGCCATTGTCCTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000483569.1
ENST00000644579.2
ENST00000644955.1
ENST00000646013.1
CDS CAA 72 bp ATCGCCCGCTCCACAAGGCCATGCTTGTGCTTCAGCTaGTACACCTTCAGCCTGGGCAGGAAGCTGTCGGCG +
Preference number: 6 (lower is better)
Translates to: IARSTRPCLCFS*YTFSLGRKLSA
Trigger: CGCCGACAGCTTCCTGCCCAGGCTGAAGGTGTACAAGCTGAAGCACAAGCATGGCCTTGTGGAGCGGGCGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254730.11
ENST00000644579.2
CDS CCA 72 bp AGGCCACCTGGGATGTGGATCTTGAACTTGCCGCTCTaGCCGAAGGCACTGTCGATGATGCCCAGTTCCCCA +
Preference number: 6 (lower is better)
Translates to: RPPGMWILNLPL*PKALSMMPSSP
Trigger: TGGGGAACTGGGCATCATCGACAGTGCCTTCGGCCAGAGCGGCAAGTTCAAGATCCACATCCCAGGTGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000254730.11
ENST00000644579.2
CDS CAA 90 bp CACTGCTGCCGAGGACAATGGCCCTCTGTGGCCTGGCCGGCCTTCTaGTCGGCCTCATCATTGTCTGTCACTGCTGGTGTCAAATCCTTG +
Preference number: 6 (lower is better)
Translates to: HCCRGQWPSVAWPAF*SASSLSVTAGVKSL
Trigger: CAAGGATTTGACACCAGCAGTGACAGACAATGATGAGGCCGACAAGAAGGCCGGCCAGGCCACAGAGGGCCATTGTCCTCGGCAGCAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000483569.1
ENST00000644579.2
ENST00000644955.1
ENST00000646013.1
CDS CAA 90 bp CAATGGCCCTCTGTGGCCTGGCCGGCCTTCTTGTCGGCCTCATCATaGTCTGTCACTGCTGGTGTCAAATCCTTGGACAGGTACTGCTCC +
Preference number: 6 (lower is better)
Translates to: QWPSVAWPAFLSASS*SVTAGVKSLDRYCS
Trigger: GGAGCAGTACCTGTCCAAGGATTTGACACCAGCAGTGACAGACAATGATGAGGCCGACAAGAAGGCCGGCCAGGCCACAGAGGGCCATTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000483569.1
ENST00000644579.2
ENST00000644955.1
ENST00000646013.1
CDS TCA 72 bp AGGGATCTCCACACTGTCACCGAGGCTGATGGAGCCTaGAAGGATGGTCCCTGTCATCACAGTGCCTTGGCC +
Preference number: 6 (lower is better)
Translates to: RDLHTVTEADGA*KDGPCHHSALA
Trigger: GGCCAAGGCACTGTGATGACAGGGACCATCCTTTCAGGCTCCATCAGCCTCGGTGACAGTGTGGAGATCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254730.11
ENST00000644579.2
CDS TCA 72 bp AGGATGCCATGGAAGGCTAGCCGGCACGTGTTGGTGTaGATGTCCGCATCTAGCCTGGAGCCAATCACCAGG +
Preference number: 6 (lower is better)
Translates to: RMPWKASRHVLV*MSASSLEPITR
Trigger: CCTGGTGATTGGCTCCAGGCTAGATGCGGACATTCACACCAACACGTGCCGGCTAGCCTTCCATGGCATCCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS TCA 72 bp CTCCTCAAACATTCGCTAATGTCCACGGGGCGCAGCTaGGGTGGCGCACGCACATTCTCTCAACACGTGGGT +
Preference number: 6 (lower is better)
Translates to: LLKHSLMSTGRS*GGARTFSQHVG
Trigger: ACCCACGTGTTGAGAGAATGTGCGTGCGCCACCTCAGCTGCGCCCCGTGGACATTAGCGAATGTTTGAGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000483569.1
ENST00000646013.1
CDS CCA 72 bp TTGTTCAGCACCACGACCAGCTTCTGGCAGGCAATCTaGCCGATCACAAGGCATTCCGCTGACTGGGTCTGC +
Preference number: 6 (lower is better)
Translates to: LFSTTTSFWQAI*PITRHSADWVC
Trigger: GCAGACCCAGTCAGCGGAATGCCTTGTGATCGGCCAGATTGCCTGCCAGAAGCTGGTCGTGGTGCTGAACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000484438.1
ENST00000644579.2
ENST00000644955.1
ENST00000645384.1
CDS CCA 72 bp GGAGCAGGATGCCATGGAAGGCTAGCCGGCACGTGTTaGTGTGAATGTCCGCATCTAGCCTGGAGCCAATCA +
Preference number: 6 (lower is better)
Translates to: GAGCHGRLAGTC*CECPHLAWSQS
Trigger: TGATTGGCTCCAGGCTAGATGCGGACATTCACACCAACACGTGCCGGCTAGCCTTCCATGGCATCCTGCTCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS TCA 72 bp CGCAGATGCCCAGCCGGTCTCCTTGCATGGCTGAAGTaGTGGGCATGTGGAACATCTGCATGGACTTCACCT +
Preference number: 6 (lower is better)
Translates to: RRCPAGLLAWLK*WACGTSAWTSP
Trigger: AGGTGAAGTCCATGCAGATGTTCCACATGCCCATCACTTCAGCCATGCAAGGAGACCGGCTGGGCATCTGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000483569.1
ENST00000484438.1
ENST00000644579.2
ENST00000644955.1
ENST00000645384.1
ENST00000646013.1
CDS GCA 72 bp TCAAACTGGGTGACGCAGATGCCCAGCCGGTCTCCTTaGATGGCTGAAGTGATGGGCATGTGGAACATCTGC +
Preference number: 6 (lower is better)
Translates to: SNWVTQMPSRSP*MAEVMGMWNIC
Trigger: GCAGATGTTCCACATGCCCATCACTTCAGCCATGCAAGGAGACCGGCTGGGCATCTGCGTCACCCAGTTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000483569.1
ENST00000484438.1
ENST00000644579.2
ENST00000644955.1
ENST00000645384.1
ENST00000646013.1
CDS GCA 72 bp GCACTGTCGATGATGCCCAGTTCCCCAGTGGACAAGTaGACCTTGAGCCCCACGAAGAGCTGGATGTTGGTT +
Preference number: 6 (lower is better)
Translates to: ALSMMPSSPVDK*TLSPTKSWMLV
Trigger: AACCAACATCCAGCTCTTCGTGGGGCTCAAGGTGCACTTGTCCACTGGGGAACTGGGCATCATCGACAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254730.11
ENST00000644579.2
CDS CCA 72 bp AACCGGCCCATGACTGTTTCATGGCCCACTGTAATGTaGAACTTGGCCTTGGTTTGCAGGGGCCCCCGGAAA +
Preference number: 6 (lower is better)
Translates to: NRPMTVSWPTVM*NLALVCRGPRK
Trigger: TTTCCGGGGGCCCCTGCAAACCAAGGCCAAGTTCCACATTACAGTGGGCCATGAAACAGTCATGGGCCGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000483569.1
ENST00000484438.1
ENST00000644579.2
ENST00000644955.1
ENST00000645384.1
ENST00000646013.1
CDS CCA 72 bp GGCCATGCTTGTGCTTCAGCTTGTACACCTTCAGCCTaGGCAGGAAGCTGTCGGCGTAGTTCCTGTCCTCTA +
Preference number: 6 (lower is better)
Translates to: GHACASACTPSA*AGSCRRSSCPL
Trigger: TAGAGGACAGGAACTACGCCGACAGCTTCCTGCCCAGGCTGAAGGTGTACAAGCTGAAGCACAAGCATGGCC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS CCA 72 bp CCAGTGGACAAGTGCACCTTGAGCCCCACGAAGAGCTaGATGTTGGTTTCCTTTTTGAACAGGGAGCGGCCG +
Preference number: 6 (lower is better)
Translates to: PVDKCTLSPTKS*MLVSFLNRERP
Trigger: CGGCCGCTCCCTGTTCAAAAAGGAAACCAACATCCAGCTCTTCGTGGGGCTCAAGGTGCACTTGTCCACTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254730.11
ENST00000644579.2
CDS CAA 72 bp TCTGTGGCCTGGCCGGCCTTCTTGTCGGCCTCATCATaGTCTGTCACTGCTGGTGTCAAATCCTTGGACAGG +
Preference number: 6 (lower is better)
Translates to: SVAWPAFLSASS*SVTAGVKSLDR
Trigger: CCTGTCCAAGGATTTGACACCAGCAGTGACAGACAATGATGAGGCCGACAAGAAGGCCGGCCAGGCCACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000483569.1
ENST00000644579.2
ENST00000644955.1
ENST00000646013.1
CDS GCA 72 bp GCCGGCCTTCTTGTCGGCCTCATCATTGTCTGTCACTaGTGGTGTCAAATCCTTGGACAGGTACTGCTCCTG +
Preference number: 6 (lower is better)
Translates to: AGLLVGLIIVCH*WCQILGQVLLL
Trigger: CAGGAGCAGTACCTGTCCAAGGATTTGACACCAGCAGTGACAGACAATGATGAGGCCGACAAGAAGGCCGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000483569.1
ENST00000644579.2
ENST00000644955.1
ENST00000646013.1
CDS CCA 72 bp GTCATCACAGTGCCTTGGCCTTTGATGGAGAAACAGTaGTCCACAGACATGAGGAACGGTCCCGAGGGGTCT +
Preference number: 6 (lower is better)
Translates to: VITVPWPLMEKQ*STDMRNGPEGS
Trigger: AGACCCCTCGGGACCGTTCCTCATGTCTGTGGACCACTGTTTCTCCATCAAAGGCCAAGGCACTGTGATGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644579.2
CDS CAA 72 bp CCCATGACTGTTTCATGGCCCACTGTAATGTGGAACTaGGCCTTGGTTTGCAGGGGCCCCCGGAAATACGGT +
Preference number: 6 (lower is better)
Translates to: PMTVSWPTVMWN*ALVCRGPRKYG
Trigger: ACCGTATTTCCGGGGGCCCCTGCAAACCAAGGCCAAGTTCCACATTACAGTGGGCCATGAAACAGTCATGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000483569.1
ENST00000484438.1
ENST00000644579.2
ENST00000644955.1
ENST00000645384.1
ENST00000646013.1
CDS CAA 90 bp ATCTGGCCGATCACAAGGCATTCCGCTGACTGGGTCTGCATCCCCTaGGTCACATCGATGACCAGCATCATCAGATCAATGATCTGGGCC +
Preference number: 6 (lower is better)
Translates to: IWPITRHSADWVCIP*VTSMTSIIRSMIWA
Trigger: GGCCCAGATCATTGATCTGATGATGCTGGTCATCGATGTGACCAAGGGGATGCAGACCCAGTCAGCGGAATGCCTTGTGATCGGCCAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000484438.1
ENST00000644579.2
ENST00000644955.1
ENST00000645384.1
CDS CCA 72 bp GTCATCACAGTGCCTTGGCCTTTGATGGAGAAACAGTaGTCCACAGACATGAGGAACGGTCCCGAGGGATCT +
Preference number: 6 (lower is better)
Translates to: VITVPWPLMEKQ*STDMRNGPEGS
Trigger: AGATCCCTCGGGACCGTTCCTCATGTCTGTGGACCACTGTTTCTCCATCAAAGGCCAAGGCACTGTGATGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000254730.11
CDS CAA 72 bp GACAAGTGCACCTTGAGCCCCACGAAGAGCTGGATGTaGGTTTCCTTTTTGAACAGGGAGCGGCCGATCACA +
Preference number: 6 (lower is better)
Translates to: DKCTLSPTKSWM*VSFLNRERPIT
Trigger: TGTGATCGGCCGCTCCCTGTTCAAAAAGGAAACCAACATCCAGCTCTTCGTGGGGCTCAAGGTGCACTTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000254730.11
ENST00000644579.2
CDS CAA 72 bp TCGATGATGCCCAGTTCCCCAGTGGACAAGTGCACCTaGAGCCCCACGAAGAGCTGGATGTTGGTTTCCTTT +
Preference number: 6 (lower is better)
Translates to: SMMPSSPVDKCT*SPTKSWMLVSF
Trigger: AAAGGAAACCAACATCCAGCTCTTCGTGGGGCTCAAGGTGCACTTGTCCACTGGGGAACTGGGCATCATCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000254730.11
ENST00000644579.2
CDS CCA 72 bp GGCCTTCTTGTCGGCCTCATCATTGTCTGTCACTGCTaGTGTCAAATCCTTGGACAGGTACTGCTCCTGGAA +
Preference number: 6 (lower is better)
Translates to: GLLVGLIIVCHC*CQILGQVLLLE
Trigger: TTCCAGGAGCAGTACCTGTCCAAGGATTTGACACCAGCAGTGACAGACAATGATGAGGCCGACAAGAAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000483569.1
ENST00000644579.2
ENST00000644955.1
ENST00000646013.1
CDS CAA 72 bp ATCACAAGGCATTCCGCTGACTGGGTCTGCATCCCCTaGGTCACATCGATGACCAGCATCATCAGATCAATG +
Preference number: 6 (lower is better)
Translates to: ITRHSADWVCIP*VTSMTSIIRSM
Trigger: CATTGATCTGATGATGCTGGTCATCGATGTGACCAAGGGGATGCAGACCCAGTCAGCGGAATGCCTTGTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000484438.1
ENST00000644579.2
ENST00000644955.1
ENST00000645384.1
CDS CAA 72 bp GAAAGGATGGTCCCTGTCATCACAGTGCCTTGGCCTTaGATGGAGAAACAGTGGTCCACAGACATGAGGAAC +
Preference number: 6 (lower is better)
Translates to: ERMVPVITVPWP*MEKQWSTDMRN
Trigger: GTTCCTCATGTCTGTGGACCACTGTTTCTCCATCAAAGGCCAAGGCACTGTGATGACAGGGACCATCCTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000254730.11
ENST00000644579.2
CDS CAA 72 bp ACTGTTTCATGGCCCACTGTAATGTGGAACTTGGCCTaGGTTTGCAGGGGCCCCCGGAAATACGGTATCTTT +
Preference number: 6 (lower is better)
Translates to: TVSWPTVMWNLA*VCRGPRKYGIF
Trigger: AAAGATACCGTATTTCCGGGGGCCCCTGCAAACCAAGGCCAAGTTCCACATTACAGTGGGCCATGAAACAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000483569.1
ENST00000484438.1
ENST00000644579.2
ENST00000644955.1
ENST00000645384.1
ENST00000646013.1
CDS CCA 72 bp GAAAGAGTCCAGTATAGGCTCCTGGTCAAAGTTATCTaGAGCAGGACTGAAGAACATCAACCGGCCCATGAC +
Preference number: 6 (lower is better)
Translates to: ERVQYRLLVKVI*SRTEEHQPAHD
Trigger: GTCATGGGCCGGTTGATGTTCTTCAGTCCTGCTCCAGATAACTTTGACCAGGAGCCTATACTGGACTCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000483569.1
ENST00000644579.2
ENST00000644955.1
ENST00000646013.1
CDS CCA 72 bp CCTCATCATTGTCTGTCACTGCTGGTGTCAAATCCTTaGACAGGTACTGCTCCTGGAAAAGGTATTCTTGAG +
Preference number: 6 (lower is better)
Translates to: PHHCLSLLVSNP*TGTAPGKGILE
Trigger: CTCAAGAATACCTTTTCCAGGAGCAGTACCTGTCCAAGGATTTGACACCAGCAGTGACAGACAATGATGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000483569.1
ENST00000644579.2
ENST00000644955.1
ENST00000646013.1
CDS CAA 90 bp GGTGCACCTCGGAACTTGGTGTTCTCTAGGGTCTTCTGCATTTTCTaGGTCATTTTATCAATTGCTGCCTGTCTCTTTCCTTCAGGTAAG +
Preference number: 6 (lower is better)
Translates to: GAPRNLVFSRVFCIF*VILSIAACLFPSGK
Trigger: CTTACCTGAAGGAAAGAGACAGGCAGCAATTGATAAAATGACCAAGAAAATGCAGAAGACCCTAGAGAACACCAAGTTCCGAGGTGCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000644579.2
ENST00000644955.1
CDS CAA 72 bp ATCCTTGGACAGGTACTGCTCCTGGAAAAGGTATTCTaGAGAGAAGTTGAAAGAGTCCAGTATAGGCTCCTG +
Preference number: 6 (lower is better)
Translates to: ILGQVLLLEKVF*REVERVQYRLL
Trigger: CAGGAGCCTATACTGGACTCTTTCAACTTCTCTCAAGAATACCTTTTCCAGGAGCAGTACCTGTCCAAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000483569.1
ENST00000644579.2
ENST00000644955.1
ENST00000646013.1
CDS CAA 90 bp TGGTGTCAAATCCTTGGACAGGTACTGCTCCTGGAAAAGGTATTCTaGAGAGAAGTTGAAAGAGTCCAGTATAGGCTCCTGGTCAAAGTT +
Preference number: 6 (lower is better)
Translates to: WCQILGQVLLLEKVF*REVERVQYRLLVKV
Trigger: AACTTTGACCAGGAGCCTATACTGGACTCTTTCAACTTCTCTCAAGAATACCTTTTCCAGGAGCAGTACCTGTCCAAGGATTTGACACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000254730.11
ENST00000483457.1
ENST00000483569.1
ENST00000644579.2
ENST00000644955.1
ENST00000646013.1
CDS CAA 90 bp CACCTTCTTCACCACTTGGTGTTCTCTAGGGTCTTCTGCATTTTCTaGGTCATTTTATCAATTGCTGCCTGTCTCTTTCCTTCAGGTAAG +
Preference number: 6 (lower is better)
Translates to: HLLHHLVFSRVFCIF*VILSIAACLFPSGK
Trigger: CTTACCTGAAGGAAAGAGACAGGCAGCAATTGATAAAATGACCAAGAAAATGCAGAAGACCCTAGAGAACACCAAGTGGTGAAGAAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000484438.1
ENST00000645384.1