RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EEF1AKNMT (Homo sapiens)

Ensembl gene IDs: ENSG00000010165

Ensembl transcript IDs: ENST00000361735.4, ENST00000362019.7, ENST00000367737.9, ENST00000466643.1, ENST00000478330.1, ENST00000485629.1

Found 418 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCAGTGTGTGCTAGGGGCTTCAGCAGGGAACTCCACTCAAGGACGTaGTGTAGGAAGCAAAGACAAACCAACCCAAGTGGTACTGAAGAG +
Preference number: 1 (lower is better)
Translates to: AVCARGFSRELHSRT*CRKQRQTNPSGTEE
Trigger: CTCTTCAGTACCACTTGGGTTGGTTTGTCTTTGCTTCCTACACCACGTCCTTGAGTGGAGTTCCCTGCTGAAGCCCCTAGCACACACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
3UTR GCA 90 bp TGTCACTCAGCAAATGTGAGCAAACAAACACTAGAGACTTTAGTCTaGCAGGTCTCTAACATGCAAAGCCATGGGGCCAGGTCCATACAC +
Preference number: 1 (lower is better)
Translates to: CHSANVSKQTLETLV*QVSNMQSHGARSIH
Trigger: GTGTATGGACCTGGCCCCATGGCTTTGCATGTTAGAGACCTGGCAGACTAAAGTCTCTAGTGTTTGTTTGCTCACATTTGCTGAGTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
3UTR TCA 90 bp ACCAGTATAAGTAGAGACGCAATAAAATTTGGATGTCTTGAGTTCTaGGGGGCTTGCACACACTTGTTAAGGCATGCAGTGTGTGCTAGG +
Preference number: 1 (lower is better)
Translates to: TSISRDAIKFGCLEF*GACTHLLRHAVCAR
Trigger: CCTAGCACACACTGCATGCCTTAACAAGTGTGTGCAAGCCCCTCAGAACTCAAGACATCCAAATTTTATTGCGTCTCTACTTATACTGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
3UTR CCA 90 bp ACTCCCTCCACTGAGAAAAAGACAAATGGCTTAGGCTACAAGGTTTaGGTCACCAAGGAAAGCTGTCAAATAATGAAGTGGGTAAGCAGA +
Preference number: 1 (lower is better)
Translates to: TPSTEKKTNGLGYKV*VTKESCQIMKWVSR
Trigger: TCTGCTTACCCACTTCATTATTTGACAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAGCCATTTGTCTTTTTCTCAGTGGAGGGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
3UTR CCA 90 bp GGCTACAAGGTTTGGGTCACCAAGGAAAGCTGTCAAATAATGAAGTaGGTAAGCAGATTCCTAAAAATTGGAACCATTTCAGCAGCAGTT +
Preference number: 1 (lower is better)
Translates to: GYKVWVTKESCQIMK*VSRFLKIGTISAAV
Trigger: AACTGCTGCTGAAATGGTTCCAATTTTTAGGAATCTGCTTACCCACTTCATTATTTGACAGCTTTCCTTGGTGACCCAAACCTTGTAGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
3UTR-3UTR CCA 90 bp TTGTTAAGGCATGCAGTGTGTGCTAGGGGCTTCAGCAGGGAACTCCACTCAAGGCATTCTCTGGCAGGCTaGGAGTCCAAGGTCAGTCTA +
Preference number: 2 (lower is better)
Translates to: LLRHAVCARGFSRELHSRHSLAG*ESKVSL
Trigger: TAGACTGACCTTGGACTCCCAGCCTGCCAGAGAATG...CCTTGAGTGGAGTTCCCTGCTGAAGCCCCTAGCACACACTGCATGCCTTAACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
3UTR-3UTR CCA 90 bp GGCTTCAGCAGGGAACTCCACTCAAGGACGTGGTGTAGGAAGCAAAGACAAACCGCAACCTCACCAAGCTaGAGGTCACATGTAGCTGAG +
Preference number: 2 (lower is better)
Translates to: GFSRELHSRTWCRKQRQTATSPS*RSHVAE
Trigger: CTCAGCTACATGTGACCTCCAGCTTGGTGAGGTTGC...GGTTTGTCTTTGCTTCCTACACCACGTCCTTGAGTGGAGTTCCCTGCTGAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
3UTR-3UTR CCA 90 bp TTGGAACCATTTCAGCAGCAGTTTCATCCACAGGGAGACAGAGTAAATGCTCTCGCAACCTCACCAAGCTaGAGGTCACATGTAGCTGAG +
Preference number: 2 (lower is better)
Translates to: LEPFQQQFHPQGDRVNALATSPS*RSHVAE
Trigger: CTCAGCTACATGTGACCTCCAGCTTGGTGAGGTTGC...GAGAGCATTTACTCTGTCTCCCTGTGGATGAAACTGCTGCTGAAATGGTTCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
3UTR-3UTR TCA 90 bp GAGAAAAAGACAAATGGCTTAGGCTACAAGGTTTGGGTCACCAAGGAAAGCTGTGGATGTCTTGAGTTCTaGGGGGCTTGCACACACTTG +
Preference number: 2 (lower is better)
Translates to: EKKTNGLGYKVWVTKESCGCLEF*GACTHL
Trigger: CAAGTGTGTGCAAGCCCCTCAGAACTCAAGACATCC...ACAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAGCCATTTGTCTTTTTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
3UTR-3UTR CCA 90 bp GAGAAAAAGACAAATGGCTTAGGCTACAAGGTTTGGGTCACCAAGGAAAGCTGTGCAACCTCACCAAGCTaGAGGTCACATGTAGCTGAG +
Preference number: 2 (lower is better)
Translates to: EKKTNGLGYKVWVTKESCATSPS*RSHVAE
Trigger: CTCAGCTACATGTGACCTCCAGCTTGGTGAGGTTGC...ACAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAGCCATTTGTCTTTTTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
3UTR-3UTR CCA 90 bp GGAACCATTTCAGCAGCAGTTTCATCCACAGGGAGACAGAGTAAATGCTCTCTCCTCCACTCAAGGACGTaGTGTAGGAAGCAAAGACAA +
Preference number: 2 (lower is better)
Translates to: GTISAAVSSTGRQSKCSLLHSRT*CRKQRQ
Trigger: TTGTCTTTGCTTCCTACACCACGTCCTTGAGTGGAG...GAGAGAGCATTTACTCTGTCTCCCTGTGGATGAAACTGCTGCTGAAATGGTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
3UTR-3UTR TCA 90 bp GAGAAAAAGACAAATGGCTTAGGCTACAAGGTTTGGGTCACCAAGGAAAGCTGTCAACCCAAGTGGTACTaGAGAGGACAAGATGGGAAG +
Preference number: 2 (lower is better)
Translates to: EKKTNGLGYKVWVTKESCQPKWY*RGQDGK
Trigger: CTTCCCATCTTGTCCTCTTCAGTACCACTTGGGTTG...ACAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAGCCATTTGTCTTTTTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
3UTR-3UTR TCA 90 bp ACAAATGGCTTAGGCTACAAGGTTTGGGTCACCAAGGAAAGCTGTCAAATAATGGGATGTCTTGAGTTCTaGGGGGCTTGCACACACTTG +
Preference number: 2 (lower is better)
Translates to: TNGLGYKVWVTKESCQIMGCLEF*GACTHL
Trigger: CAAGTGTGTGCAAGCCCCTCAGAACTCAAGACATCC...CATTATTTGACAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAGCCATTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
3UTR-3UTR GCA 90 bp GGAACCATTTCAGCAGCAGTTTCATCCACAGGGAGACAGAGTAAATGCTCTCTCGGTCTTTTGGCATCTTaGTCTGCTATCTCACTTGAG +
Preference number: 2 (lower is better)
Translates to: GTISAAVSSTGRQSKCSLGLLAS*SAISLE
Trigger: CTCAAGTGAGATAGCAGAGCAAGATGCCAAAAGACC...GAGAGAGCATTTACTCTGTCTCCCTGTGGATGAAACTGCTGCTGAAATGGTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
3UTR-3UTR TCA 90 bp AAAAAGACAAATGGCTTAGGCTACAAGGTTTGGGTCACCAAGGAAAGCTGTCAACAACCCAAGTGGTACTaGAGAGGACAAGATGGGAAG +
Preference number: 2 (lower is better)
Translates to: KKTNGLGYKVWVTKESCQQPKWY*RGQDGK
Trigger: CTTCCCATCTTGTCCTCTTCAGTACCACTTGGGTTG...TTGACAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAGCCATTTGTCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
3UTR-3UTR TCA 90 bp ACAAATGGCTTAGGCTACAAGGTTTGGGTCACCAAGGAAAGCTGTCAAATAATGCAACCCAAGTGGTACTaGAGAGGACAAGATGGGAAG +
Preference number: 2 (lower is better)
Translates to: TNGLGYKVWVTKESCQIMQPKWY*RGQDGK
Trigger: CTTCCCATCTTGTCCTCTTCAGTACCACTTGGGTTG...CATTATTTGACAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAGCCATTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
3UTR-3UTR TCA 90 bp GGAACCATTTCAGCAGCAGTTTCATCCACAGGGAGACAGAGTAAATGCTCTCTCCTCTGCTATCTCACTTaGGATCACTCCTATAGAACT +
Preference number: 2 (lower is better)
Translates to: GTISAAVSSTGRQSKCSLLCYLT*DHSYRT
Trigger: AGTTCTATAGGAGTGATCTCAAGTGAGATAGCAGAG...GAGAGAGCATTTACTCTGTCTCCCTGTGGATGAAACTGCTGCTGAAATGGTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
3UTR-3UTR CCA 90 bp CTATTTATGGTCTTTTGGCATCTTGCTCTGCTATCTCACTTGAGATCACTCCTACATTCTCTGGCAGGCTaGGAGTCCAAGGTCAGTCTA +
Preference number: 2 (lower is better)
Translates to: LFMVFWHLALLSHLRSLLHSLAG*ESKVSL
Trigger: TAGACTGACCTTGGACTCCCAGCCTGCCAGAGAATG...TAGGAGTGATCTCAAGTGAGATAGCAGAGCAAGATGCCAAAAGACCATAAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
3UTR-3UTR CCA 90 bp GAGAAAAAGACAAATGGCTTAGGCTACAAGGTTTGGGTCACCAAGGAAAGCTGTCTCCACTCAAGGACGTaGTGTAGGAAGCAAAGACAA +
Preference number: 2 (lower is better)
Translates to: EKKTNGLGYKVWVTKESCLHSRT*CRKQRQ
Trigger: TTGTCTTTGCTTCCTACACCACGTCCTTGAGTGGAG...ACAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAGCCATTTGTCTTTTTCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
3UTR CAA 90 bp GAGTGTGAAACCAAGAAAAATACGAAGCTTCAAAAGTACTGTGCGTaGTATTTCTTCATTCTCTGGCAGGCTGGGAGTCCAAGGTCAGTC +
Preference number: 2 (lower is better)
Translates to: ECETKKNTKLQKYCA*YFFILWQAGSPRSV
Trigger: GACTGACCTTGGACTCCCAGCCTGCCAGAGAATGAAGAAATACAACGCACAGTACTTTTGAAGCTTCGTATTTTTCTTGGTTTCACACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
3UTR-3UTR GCA 90 bp AAAAAGACAAATGGCTTAGGCTACAAGGTTTGGGTCACCAAGGAAAGCTGTCAAGGTCTTTTGGCATCTTaGTCTGCTATCTCACTTGAG +
Preference number: 2 (lower is better)
Translates to: KKTNGLGYKVWVTKESCQGLLAS*SAISLE
Trigger: CTCAAGTGAGATAGCAGAGCAAGATGCCAAAAGACC...TTGACAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAGCCATTTGTCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
3UTR-3UTR TCA 90 bp GCATCTTGCTCTGCTATCTCACTTGAGATCACTCCTATAGAACTAATAGAGGAAAAAATTTGGATGTCTTaGGTTCTGAGGGGCTTGCAC +
Preference number: 2 (lower is better)
Translates to: ASCSAISLEITPIELIEEKIWMS*VLRGLH
Trigger: GTGCAAGCCCCTCAGAACTCAAGACATCCAAATTTT...TTCCTCTATTAGTTCTATAGGAGTGATCTCAAGTGAGATAGCAGAGCAAGATGC
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
3UTR-3UTR TCA 90 bp AAAAAGACAAATGGCTTAGGCTACAAGGTTTGGGTCACCAAGGAAAGCTGTCAACTCTGCTATCTCACTTaGGATCACTCCTATAGAACT +
Preference number: 2 (lower is better)
Translates to: KKTNGLGYKVWVTKESCQLCYLT*DHSYRT
Trigger: AGTTCTATAGGAGTGATCTCAAGTGAGATAGCAGAG...TTGACAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAGCCATTTGTCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
3UTR-3UTR CCA 90 bp AAAAAGACAAATGGCTTAGGCTACAAGGTTTGGGTCACCAAGGAAAGCTGTCAAACCTTACTCTATTTATaGTCTTTTGGCATCTTGCTC +
Preference number: 2 (lower is better)
Translates to: KKTNGLGYKVWVTKESCQTLLYL*SFGILL
Trigger: GAGCAAGATGCCAAAAGACCATAAATAGAGTAAGGT...TTGACAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAGCCATTTGTCTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
3UTR CAA 90 bp AAGATTGATGTTTCCAGCCAAGTGAGATTTGGGTTTAGATATAGTTaGGGCTTAAGTATCCTTTATCTCAGATTAAATGAGACAGTGCAT +
Preference number: 2 (lower is better)
Translates to: KIDVSSQVRFGFRYS*GLSILYLRLNETVH
Trigger: ATGCACTGTCTCATTTAATCTGAGATAAAGGATACTTAAGCCCAAACTATATCTAAACCCAAATCTCACTTGGCTGGAAACATCAATCTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
3UTR CCA 72 bp GCTAGGGGCTTCAGCAGGGAACTCCACTCAAGGACGTaGTGTAGGAAGCAAAGACAAACCAACCCAAGTGGT +
Preference number: 3 (lower is better)
Translates to: ARGFSRELHSRT*CRKQRQTNPSG
Trigger: ACCACTTGGGTTGGTTTGTCTTTGCTTCCTACACCACGTCCTTGAGTGGAGTTCCCTGCTGAAGCCCCTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
3UTR GCA 72 bp GCAAATGTGAGCAAACAAACACTAGAGACTTTAGTCTaGCAGGTCTCTAACATGCAAAGCCATGGGGCCAGG +
Preference number: 3 (lower is better)
Translates to: ANVSKQTLETLV*QVSNMQSHGAR
Trigger: CCTGGCCCCATGGCTTTGCATGTTAGAGACCTGGCAGACTAAAGTCTCTAGTGTTTGTTTGCTCACATTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
3UTR-3UTR CAA 90 bp GCATCTTGCTCTGCTATCTCACTTGAGATCACTCCTATAGAACTAATAGAGGAAGGGGCTTGCACACACTaGTTAAGGCATGCAGTGTGT +
Preference number: 3 (lower is better)
Translates to: ASCSAISLEITPIELIEEGACTH*LRHAVC
Trigger: ACACACTGCATGCCTTAACAAGTGTGTGCAAGCCCC...TTCCTCTATTAGTTCTATAGGAGTGATCTCAAGTGAGATAGCAGAGCAAGATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
3UTR-3UTR CAA 90 bp ATTTATGGTCTTTTGGCATCTTGCTCTGCTATCTCACTTGAGATCACTCCTATAGGGGCTTGCACACACTaGTTAAGGCATGCAGTGTGT +
Preference number: 3 (lower is better)
Translates to: IYGLLASCSAISLEITPIGACTH*LRHAVC
Trigger: ACACACTGCATGCCTTAACAAGTGTGTGCAAGCCCC...TATAGGAGTGATCTCAAGTGAGATAGCAGAGCAAGATGCCAAAAGACCATAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
3UTR-3UTR CAA 90 bp GAAAAAGACAAATGGCTTAGGCTACAAGGTTTGGGTCACCAAGGAAAGCTGTCACAAAAGTACTGTGCGTaGTATTTCTTCATTCTCTGG +
Preference number: 3 (lower is better)
Translates to: EKDKWLRLQGLGHQGKLSQKYCA*YFFILW
Trigger: CCAGAGAATGAAGAAATACAACGCACAGTACTTTTG...TGACAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAGCCATTTGTCTTTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
3UTR-3UTR CAA 90 bp CACTCAGCAAATGTGAGCAAACAAACACTAGAGACTTTAGTCTGCCAGGTCTCTTCTATTTATGGTCTTTaGGCATCTTGCTCTGCTATC +
Preference number: 3 (lower is better)
Translates to: HSANVSKQTLETLVCQVSSIYGL*ASCSAI
Trigger: GATAGCAGAGCAAGATGCCAAAAGACCATAAATAGA...AGAGACCTGGCAGACTAAAGTCTCTAGTGTTTGTTTGCTCACATTTGCTGAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
3UTR CCA 72 bp ACTGAGAAAAAGACAAATGGCTTAGGCTACAAGGTTTaGGTCACCAAGGAAAGCTGTCAAATAATGAAGTGG +
Preference number: 3 (lower is better)
Translates to: TEKKTNGLGYKV*VTKESCQIMKW
Trigger: CCACTTCATTATTTGACAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAGCCATTTGTCTTTTTCTCAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
3UTR-3UTR CAA 90 bp ACAAATGGCTTAGGCTACAAGGTTTGGGTCACCAAGGAAAGCTGTCAAATAATGCAAAAGTACTGTGCGTaGTATTTCTTCATTCTCTGG +
Preference number: 3 (lower is better)
Translates to: TNGLGYKVWVTKESCQIMQKYCA*YFFILW
Trigger: CCAGAGAATGAAGAAATACAACGCACAGTACTTTTG...CATTATTTGACAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAGCCATTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
3UTR-3UTR CAA 90 bp AGCAAACAAACACTAGAGACTTTAGTCTGCCAGGTCTCTAACATGCAAAGCCATTCTATTTATGGTCTTTaGGCATCTTGCTCTGCTATC +
Preference number: 3 (lower is better)
Translates to: SKQTLETLVCQVSNMQSHSIYGL*ASCSAI
Trigger: GATAGCAGAGCAAGATGCCAAAAGACCATAAATAGA...ATGGCTTTGCATGTTAGAGACCTGGCAGACTAAAGTCTCTAGTGTTTGTTTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
3UTR-3UTR CAA 90 bp ATTTATGGTCTTTTGGCATCTTGCTCTGCTATCTCACTTGAGATCACTCCTATACAAAAGTACTGTGCGTaGTATTTCTTCATTCTCTGG +
Preference number: 3 (lower is better)
Translates to: IYGLLASCSAISLEITPIQKYCA*YFFILW
Trigger: CCAGAGAATGAAGAAATACAACGCACAGTACTTTTG...TATAGGAGTGATCTCAAGTGAGATAGCAGAGCAAGATGCCAAAAGACCATAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
3UTR CCA 72 bp CACATCTATAGAAACCTTACTCTATTTATGGTCTTTTaGCATCTTGCTCTGCTATCTCACTTGAGATCACTC +
Preference number: 3 (lower is better)
Translates to: HIYRNLTLFMVF*HLALLSHLRSL
Trigger: GAGTGATCTCAAGTGAGATAGCAGAGCAAGATGCCAAAAGACCATAAATAGAGTAAGGTTTCTATAGATGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
3UTR TCA 72 bp TTATGGTCTTTTGGCATCTTGCTCTGCTATCTCACTTaGGATCACTCCTATAGAACTAATAGAGGAATAAAT +
Preference number: 3 (lower is better)
Translates to: LWSFGILLCYLT*DHSYRTNRGIN
Trigger: ATTTATTCCTCTATTAGTTCTATAGGAGTGATCTCAAGTGAGATAGCAGAGCAAGATGCCAAAAGACCATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR GCA 90 bp GGCTTCAGCAGGGAACTCCACTCAAGGACGTGGTGTAGGAAGCAAAGACAAACCGGACTGCCCCGGGGCTaGAGGGAGGTCCTCCGCATC +
Preference number: 4 (lower is better)
Translates to: GFSRELHSRTWCRKQRQTGLPRG*REVLRI
Trigger: GATGCGGAGGACCTCCCTGCAGCCCCGGGGCAGTCC...GGTTTGTCTTTGCTTCCTACACCACGTCCTTGAGTGGAGTTCCCTGCTGAAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR GCA 90 bp AGGGAACTCCACTCAAGGACGTGGTGTAGGAAGCAAAGACAAACCAACCCAAGTGGACTGCCCCGGGGCTaGAGGGAGGTCCTCCGCATC +
Preference number: 4 (lower is better)
Translates to: RELHSRTWCRKQRQTNPSGLPRG*REVLRI
Trigger: GATGCGGAGGACCTCCCTGCAGCCCCGGGGCAGTCC...ACTTGGGTTGGTTTGTCTTTGCTTCCTACACCACGTCCTTGAGTGGAGTTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR GCA 90 bp TTGTTAAGGCATGCAGTGTGTGCTAGGGGCTTCAGCAGGGAACTCCACTCAAGGAATCTCACACACGCTTaGCCCCTCCTCCGCGCCTGC +
Preference number: 4 (lower is better)
Translates to: LLRHAVCARGFSRELHSRNLTHA*PLLRAC
Trigger: GCAGGCGCGGAGGAGGGGGCAAGCGTGTGTGAGATT...CCTTGAGTGGAGTTCCCTGCTGAAGCCCCTAGCACACACTGCATGCCTTAACAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR GCA 90 bp AGGGAACTCCACTCAAGGACGTGGTGTAGGAAGCAAAGACAAACCAACCCAAGTTACTGCTGTCGCTCCTaGACCGCCTCGGCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: RELHSRTWCRKQRQTNPSYCCRS*TASASR
Trigger: GCGGCTGGCCGAGGCGGTGCAGGAGCGACAGCAGTA...ACTTGGGTTGGTTTGTCTTTGCTTCCTACACCACGTCCTTGAGTGGAGTTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000362019.7
CDS-3UTR GCA 90 bp GGCTTCAGCAGGGAACTCCACTCAAGGACGTGGTGTAGGAAGCAAAGACAAACCTGCGGCGCAGCTGGCTaGACAGCCAGGCATACTGCT +
Preference number: 4 (lower is better)
Translates to: GFSRELHSRTWCRKQRQTCGAAG*TARHTA
Trigger: AGCAGTATGCCTGGCTGTGCAGCCAGCTGCGCCGCA...GGTTTGTCTTTGCTTCCTACACCACGTCCTTGAGTGGAGTTCCCTGCTGAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000362019.7
CDS-3UTR CCA 90 bp GGACGTGGTGTAGGAAGCAAAGACAAACCAACCCAAGTGGTACTGAAGAGGACAACACACTCCCCAGCCTaGCCTTGCGGCGCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: GRGVGSKDKPTQVVLKRTTHSPA*PCGAAG
Trigger: GCCAGCTGCGCCGCAAGGCCAGGCTGGGGAGTGTGT...TGTCCTCTTCAGTACCACTTGGGTTGGTTTGTCTTTGCTTCCTACACCACGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000362019.7
CDS-3UTR CCA 90 bp AGGGAACTCCACTCAAGGACGTGGTGTAGGAAGCAAAGACAAACCAACCCAAGTACACACTCCCCAGCCTaGCCTTGCGGCGCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: RELHSRTWCRKQRQTNPSTHSPA*PCGAAG
Trigger: GCCAGCTGCGCCGCAAGGCCAGGCTGGGGAGTGTGT...ACTTGGGTTGGTTTGTCTTTGCTTCCTACACCACGTCCTTGAGTGGAGTTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000362019.7
CDS-3UTR CCA 90 bp GGCTTCAGCAGGGAACTCCACTCAAGGACGTGGTGTAGGAAGCAAAGACAAACCCCTGGTCCTGGCTGTTaGCCACTTGGTGCACCCTCA +
Preference number: 4 (lower is better)
Translates to: GFSRELHSRTWCRKQRQTPGPGC*PLGAPS
Trigger: TGAGGGTGCACCAAGTGGCCAACAGCCAGGACCAGG...GGTTTGTCTTTGCTTCCTACACCACGTCCTTGAGTGGAGTTCCCTGCTGAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000362019.7
CDS-3UTR GCA 90 bp TTGTTAAGGCATGCAGTGTGTGCTAGGGGCTTCAGCAGGGAACTCCACTCAAGGGGACAGCATCCAGGGTaGCCTTGTCCAACACCACCT +
Preference number: 4 (lower is better)
Translates to: LLRHAVCARGFSRELHSRGQHPG*PCPTPP
Trigger: AGGTGGTGTTGGACAAGGGCACCCTGGATGCTGTCC...CCTTGAGTGGAGTTCCCTGCTGAAGCCCCTAGCACACACTGCATGCCTTAACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR GCA 90 bp AGGGAACTCCACTCAAGGACGTGGTGTAGGAAGCAAAGACAAACCAACCCAAGTCCTGAGCCAGGGAGATaGAGAGATAGCGACCGCCCA +
Preference number: 4 (lower is better)
Translates to: RELHSRTWCRKQRQTNPSPEPGR*RDSDRP
Trigger: TGGGCGGTCGCTATCTCTGCATCTCCCTGGCTCAGG...ACTTGGGTTGGTTTGTCTTTGCTTCCTACACCACGTCCTTGAGTGGAGTTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000362019.7
CDS-3UTR GCA 90 bp TTGTTAAGGCATGCAGTGTGTGCTAGGGGCTTCAGCAGGGAACTCCACTCAAGGGGAGAACTGAGGCTCTaGTTCCAACACCTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: LLRHAVCARGFSRELHSRGELRL*FQHLVL
Trigger: CAGGACCAGGTGTTGGAAGCAGAGCCTCAGTTCTCC...CCTTGAGTGGAGTTCCCTGCTGAAGCCCCTAGCACACACTGCATGCCTTAACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000362019.7
CDS-3UTR GCA 90 bp GAAAAAGACAAATGGCTTAGGCTACAAGGTTTGGGTCACCAAGGAAAGCTGTCACAAAGAGGGGGAGGCTaGCCCCGCCCAGGCCTACCA +
Preference number: 4 (lower is better)
Translates to: EKDKWLRLQGLGHQGKLSQRGGG*PRPGLP
Trigger: TGGTAGGCCTGGGCGGGGGCAGCCTCCCCCTCTTTG...TGACAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAGCCATTTGTCTTTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR GCA 90 bp TTGTTAAGGCATGCAGTGTGTGCTAGGGGCTTCAGCAGGGAACTCCACTCAAGGGCCAGGTCTCTAACATaGAAAGCCATGGGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: LLRHAVCARGFSRELHSRARSLT*KAMGPG
Trigger: ACCTGGCCCCATGGCTTTGCATGTTAGAGACCTGGC...CCTTGAGTGGAGTTCCCTGCTGAAGCCCCTAGCACACACTGCATGCCTTAACAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR TCA 90 bp TTGTTAAGGCATGCAGTGTGTGCTAGGGGCTTCAGCAGGGAACTCCACTCAAGGTGTTCCTTCCCCACGTaGAGAGCCCCTCACACTTTT +
Preference number: 4 (lower is better)
Translates to: LLRHAVCARGFSRELHSRCSFPT*RAPHTF
Trigger: AAAAGTGTGAGGGGCTCTTCACGTGGGGAAGGAACA...CCTTGAGTGGAGTTCCCTGCTGAAGCCCCTAGCACACACTGCATGCCTTAACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR GCA 90 bp TTGTTAAGGCATGCAGTGTGTGCTAGGGGCTTCAGCAGGGAACTCCACTCAAGGGGAGAAGTGGCCCACTaGTTTCTTCAGGATGTGAGC +
Preference number: 4 (lower is better)
Translates to: LLRHAVCARGFSRELHSRGEVAH*FLQDVS
Trigger: GCTCACATCCTGAAGAAAGCAGTGGGCCACTTCTCC...CCTTGAGTGGAGTTCCCTGCTGAAGCCCCTAGCACACACTGCATGCCTTAACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000362019.7
CDS-3UTR GCA 90 bp TTGGAACCATTTCAGCAGCAGTTTCATCCACAGGGAGACAGAGTAAATGCTCTCCACAGCCAGGCATACTaGTGTCGCTCCTGCACCGCC +
Preference number: 4 (lower is better)
Translates to: LEPFQQQFHPQGDRVNALHSQAY*CRSCTA
Trigger: GGCGGTGCAGGAGCGACAGCAGTATGCCTGGCTGTG...GAGAGCATTTACTCTGTCTCCCTGTGGATGAAACTGCTGCTGAAATGGTTCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000362019.7
CDS-3UTR GCA 90 bp TTGTTAAGGCATGCAGTGTGTGCTAGGGGCTTCAGCAGGGAACTCCACTCAAGGAACCTGGCTTCGGACTaGACCACATTCCTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: LLRHAVCARGFSRELHSRNLASD*TTFLLL
Trigger: CAGCAACAGGAATGTGGTGCAGTCCGAAGCCAGGTT...CCTTGAGTGGAGTTCCCTGCTGAAGCCCCTAGCACACACTGCATGCCTTAACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR GCA 90 bp ACAAATGGCTTAGGCTACAAGGTTTGGGTCACCAAGGAAAGCTGTCAAATAATGCAAAGAGGGGGAGGCTaGCCCCGCCCAGGCCTACCA +
Preference number: 4 (lower is better)
Translates to: TNGLGYKVWVTKESCQIMQRGGG*PRPGLP
Trigger: TGGTAGGCCTGGGCGGGGGCAGCCTCCCCCTCTTTG...CATTATTTGACAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAGCCATTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR GCA 90 bp TTGTTAAGGCATGCAGTGTGTGCTAGGGGCTTCAGCAGGGAACTCCACTCAAGGTGCTTCTCCTCCTCCTaGCAAGCTGGCGATATAGTC +
Preference number: 4 (lower is better)
Translates to: LLRHAVCARGFSRELHSRCFSSS*QAGDIV
Trigger: GACTATATCGCCAGCTTGGCAGGAGGAGGAGAAGCA...CCTTGAGTGGAGTTCCCTGCTGAAGCCCCTAGCACACACTGCATGCCTTAACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CCA 90 bp TTGTTAAGGCATGCAGTGTGTGCTAGGGGCTTCAGCAGGGAACTCCACTCAAGGTTCAAGAAGCTCATCTaGGGCCGTCGGGTGGCATTA +
Preference number: 4 (lower is better)
Translates to: LLRHAVCARGFSRELHSRFKKLI*GRRVAL
Trigger: TAATGCCACCCGACGGCCCCAGATGAGCTTCTTGAA...CCTTGAGTGGAGTTCCCTGCTGAAGCCCCTAGCACACACTGCATGCCTTAACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CCA 90 bp TTGTTAAGGCATGCAGTGTGTGCTAGGGGCTTCAGCAGGGAACTCCACTCAAGGCATCCTTCAGCAACCTaGCTTCGGACTGCACCACAT +
Preference number: 4 (lower is better)
Translates to: LLRHAVCARGFSRELHSRHPSAT*LRTAPH
Trigger: ATGTGGTGCAGTCCGAAGCCAGGTTGCTGAAGGATG...CCTTGAGTGGAGTTCCCTGCTGAAGCCCCTAGCACACACTGCATGCCTTAACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CCA 90 bp TTGTTAAGGCATGCAGTGTGTGCTAGGGGCTTCAGCAGGGAACTCCACTCAAGGGAGAAGCCAAACCACTaGGTGGCCACTTCCAACATG +
Preference number: 4 (lower is better)
Translates to: LLRHAVCARGFSRELHSREKPNH*VATSNM
Trigger: CATGTTGGAAGTGGCCACCCAGTGGTTTGGCTTCTC...CCTTGAGTGGAGTTCCCTGCTGAAGCCCCTAGCACACACTGCATGCCTTAACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR TCA 90 bp GAGAAAAAGACAAATGGCTTAGGCTACAAGGTTTGGGTCACCAAGGAAAGCTGTGGGGGAACACTGCCTTaGGCCCAGCCAGCACTGAGT +
Preference number: 4 (lower is better)
Translates to: EKKTNGLGYKVWVTKESCGGTLP*AQPALS
Trigger: ACTCAGTGCTGGCTGGGCTCAAGGCAGTGTTCCCCC...ACAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAGCCATTTGTCTTTTTCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR GCA 90 bp TTGGAACCATTTCAGCAGCAGTTTCATCCACAGGGAGACAGAGTAAATGCTCTCCCTGAGCCAGGGAGATaGAGAGATAGCGACCGCCCA +
Preference number: 4 (lower is better)
Translates to: LEPFQQQFHPQGDRVNALPEPGR*RDSDRP
Trigger: TGGGCGGTCGCTATCTCTGCATCTCCCTGGCTCAGG...GAGAGCATTTACTCTGTCTCCCTGTGGATGAAACTGCTGCTGAAATGGTTCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000362019.7
CDS-3UTR GCA 90 bp AAAAGTACTGTGCGTTGTATTTCTTCATTCTCTGGCAGGCTGGGAGTCCAAGGTCTCTTATCAATGGACTaGCCCGGGGCTGCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: KSTVRCISSFSGRLGVQGLLSMD*PGAAGR
Trigger: CCTCCCTGCAGCCCCGGGGCAGTCCATTGATAAGAG...ACCTTGGACTCCCAGCCTGCCAGAGAATGAAGAAATACAACGCACAGTACTTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR GCA 90 bp GTAGCTGAGTGTGAAACCAAGAAAAATACGAAGCTTCAAAAGTACTGTGCGTTGCAAAGAGGGGGAGGCTaGCCCCGCCCAGGCCTACCA +
Preference number: 4 (lower is better)
Translates to: VAECETKKNTKLQKYCALQRGGG*PRPGLP
Trigger: TGGTAGGCCTGGGCGGGGGCAGCCTCCCCCTCTTTG...CAACGCACAGTACTTTTGAAGCTTCGTATTTTTCTTGGTTTCACACTCAGCTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR GCA 90 bp GGACGTGGTGTAGGAAGCAAAGACAAACCAACCCAAGTGGTACTGAAGAGGACACAGGCTCCGGGACACTaGAGTGGGAATTCTTTCCAC +
Preference number: 4 (lower is better)
Translates to: GRGVGSKDKPTQVVLKRTQAPGH*SGNSFH
Trigger: GTGGAAAGAATTCCCACTGCAGTGTCCCGGAGCCTG...TGTCCTCTTCAGTACCACTTGGGTTGGTTTGTCTTTGCTTCCTACACCACGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000367737.9
CDS-3UTR GCA 90 bp TTGTTAAGGCATGCAGTGTGTGCTAGGGGCTTCAGCAGGGAACTCCACTCAAGGTCCTACTGCCGAAGCTaGGTTTTCAAGACTCCCCTA +
Preference number: 4 (lower is better)
Translates to: LLRHAVCARGFSRELHSRSYCRS*VFKTPL
Trigger: TAGGGGAGTCTTGAAAACGCAGCTTCGGCAGTAGGA...CCTTGAGTGGAGTTCCCTGCTGAAGCCCCTAGCACACACTGCATGCCTTAACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000367737.9
CDS-3UTR CCA 90 bp AAAAAGACAAATGGCTTAGGCTACAAGGTTTGGGTCACCAAGGAAAGCTGTCAAGTGGAGGGTGTAGCGTaGCTCCCCCGTGTCCCCATC +
Preference number: 4 (lower is better)
Translates to: KKTNGLGYKVWVTKESCQVEGVA*LPRVPI
Trigger: GATGGGGACACGGGGGAGCCACGCTACACCCTCCAC...TTGACAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAGCCATTTGTCTTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000362019.7
CDS-3UTR CCA 90 bp AGCAAACAAACACTAGAGACTTTAGTCTGCCAGGTCTCTAACATGCAAAGCCATGTGGAGGGTGTAGCGTaGCTCCCCCGTGTCCCCATC +
Preference number: 4 (lower is better)
Translates to: SKQTLETLVCQVSNMQSHVEGVA*LPRVPI
Trigger: GATGGGGACACGGGGGAGCCACGCTACACCCTCCAC...ATGGCTTTGCATGTTAGAGACCTGGCAGACTAAAGTCTCTAGTGTTTGTTTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000362019.7
CDS-3UTR CCA 90 bp GGCTTCAGCAGGGAACTCCACTCAAGGACGTGGTGTAGGAAGCAAAGACAAACCTTCATTCGGTCACTCTaGGAGAAGCCAAACCACTGG +
Preference number: 4 (lower is better)
Translates to: GFSRELHSRTWCRKQRQTFIRSL*EKPNHW
Trigger: CCAGTGGTTTGGCTTCTCCCAGAGTGACCGAATGAA...GGTTTGTCTTTGCTTCCTACACCACGTCCTTGAGTGGAGTTCCCTGCTGAAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CCA 90 bp GGCTTCAGCAGGGAACTCCACTCAAGGACGTGGTGTAGGAAGCAAAGACAAACCAGGCCATCTGCAATGTaGACCTTCATTCGGTCACTC +
Preference number: 4 (lower is better)
Translates to: GFSRELHSRTWCRKQRQTRPSAM*TFIRSL
Trigger: GAGTGACCGAATGAAGGTCCACATTGCAGATGGCCT...GGTTTGTCTTTGCTTCCTACACCACGTCCTTGAGTGGAGTTCCCTGCTGAAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CCA 90 bp AGGGAACTCCACTCAAGGACGTGGTGTAGGAAGCAAAGACAAACCAACCCAAGTGTCCGCTCCAAAGCCTaGGCTGTTTCTAGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: RELHSRTWCRKQRQTNPSVRSKA*AVSRSS
Trigger: AGAGCTCCTAGAAACAGCCCAGGCTTTGGAGCGGAC...ACTTGGGTTGGTTTGTCTTTGCTTCCTACACCACGTCCTTGAGTGGAGTTCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR TCA 90 bp GAGAAAAAGACAAATGGCTTAGGCTACAAGGTTTGGGTCACCAAGGAAAGCTGTCTGCAGTCTTGGTGCTaGACGGTCCGGACCCCAATG +
Preference number: 4 (lower is better)
Translates to: EKKTNGLGYKVWVTKESCLQSWC*TVRTPM
Trigger: CATTGGGGTCCGGACCGTTCAGCACCAAGACTGCAG...ACAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAGCCATTTGTCTTTTTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR TCA 90 bp GAAAAAGACAAATGGCTTAGGCTACAAGGTTTGGGTCACCAAGGAAAGCTGTCACTGCAGTCTTGGTGCTaGACGGTCCGGACCCCAATG +
Preference number: 4 (lower is better)
Translates to: EKDKWLRLQGLGHQGKLSLQSWC*TVRTPM
Trigger: CATTGGGGTCCGGACCGTTCAGCACCAAGACTGCAG...TGACAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAGCCATTTGTCTTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR TCA 90 bp AGGGAACTCCACTCAAGGACGTGGTGTAGGAAGCAAAGACAAACCAACCCAAGTTGCTCAGGGTGCAGCTaGCAGAACAGGATCTCATTC +
Preference number: 4 (lower is better)
Translates to: RELHSRTWCRKQRQTNPSCSGCS*QNRISF
Trigger: GAATGAGATCCTGTTCTGTCAGCTGCACCCTGAGCA...ACTTGGGTTGGTTTGTCTTTGCTTCCTACACCACGTCCTTGAGTGGAGTTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR GCA 90 bp ATTTATGGTCTTTTGGCATCTTGCTCTGCTATCTCACTTGAGATCACTCCTATATACTGCTGTCGCTCCTaGACCGCCTCGGCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: IYGLLASCSAISLEITPIYCCRS*TASASR
Trigger: GCGGCTGGCCGAGGCGGTGCAGGAGCGACAGCAGTA...TATAGGAGTGATCTCAAGTGAGATAGCAGAGCAAGATGCCAAAAGACCATAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000362019.7
CDS-3UTR GCA 90 bp ACAAATGGCTTAGGCTACAAGGTTTGGGTCACCAAGGAAAGCTGTCAAATAATGTGCGGCGCAGCTGGCTaGACAGCCAGGCATACTGCT +
Preference number: 4 (lower is better)
Translates to: TNGLGYKVWVTKESCQIMCGAAG*TARHTA
Trigger: AGCAGTATGCCTGGCTGTGCAGCCAGCTGCGCCGCA...CATTATTTGACAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAGCCATTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000362019.7
CDS-3UTR GCA 90 bp CACTCAGCAAATGTGAGCAAACAAACACTAGAGACTTTAGTCTGCCAGGTCTCTGACAGAAAGGGGACCTaGTGCTGGGTGGGCATCCCA +
Preference number: 4 (lower is better)
Translates to: HSANVSKQTLETLVCQVSDRKGT*CWVGIP
Trigger: TGGGATGCCCACCCAGCAGCAGGTCCCCTTTCTGTC...AGAGACCTGGCAGACTAAAGTCTCTAGTGTTTGTTTGCTCACATTTGCTGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR GCA 90 bp CACTCAGCAAATGTGAGCAAACAAACACTAGAGACTTTAGTCTGCCAGGTCTCTCTCTTATCAATGGACTaGCCCGGGGCTGCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: HSANVSKQTLETLVCQVSLLSMD*PGAAGR
Trigger: CCTCCCTGCAGCCCCGGGGCAGTCCATTGATAAGAG...AGAGACCTGGCAGACTAAAGTCTCTAGTGTTTGTTTGCTCACATTTGCTGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR GCA 90 bp TTGTTAAGGCATGCAGTGTGTGCTAGGGGCTTCAGCAGGGAACTCCACTCAAGGGGTTCATGTTCCTACTaGCGAAGCTGCGTTTTCAAG +
Preference number: 4 (lower is better)
Translates to: LLRHAVCARGFSRELHSRGSCSY*RSCVFK
Trigger: CTTGAAAACGCAGCTTCGGCAGTAGGAACATGAACC...CCTTGAGTGGAGTTCCCTGCTGAAGCCCCTAGCACACACTGCATGCCTTAACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000367737.9
CDS-3UTR CCA 90 bp GTAGCTGAGTGTGAAACCAAGAAAAATACGAAGCTTCAAAAGTACTGTGCGTTGGCCTTGCGGCGCAGCTaGCTGCACAGCCAGGCATAC +
Preference number: 4 (lower is better)
Translates to: VAECETKKNTKLQKYCALALRRS*LHSQAY
Trigger: GTATGCCTGGCTGTGCAGCCAGCTGCGCCGCAAGGC...CAACGCACAGTACTTTTGAAGCTTCGTATTTTTCTTGGTTTCACACTCAGCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000362019.7
CDS-3UTR CCA 90 bp AGGGAACTCCACTCAAGGACGTGGTGTAGGAAGCAAAGACAAACCAACCCAAGTATGATTGTCCCGCGATaGTTTCACAGTGGGGCTGTC +
Preference number: 4 (lower is better)
Translates to: RELHSRTWCRKQRQTNPSMIVPR*FHSGAV
Trigger: GACAGCCCCACTGTGAAACCATCGCGGGACAATCAT...ACTTGGGTTGGTTTGTCTTTGCTTCCTACACCACGTCCTTGAGTGGAGTTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000362019.7
CDS-3UTR CCA 90 bp GGCTTCAGCAGGGAACTCCACTCAAGGACGTGGTGTAGGAAGCAAAGACAAACCAGCTCAGCTTGGATGTaGTCCATGCTTTCATACTGC +
Preference number: 4 (lower is better)
Translates to: GFSRELHSRTWCRKQRQTSSAWM*SMLSYC
Trigger: GCAGTATGAAAGCATGGACCACATCCAAGCTGAGCT...GGTTTGTCTTTGCTTCCTACACCACGTCCTTGAGTGGAGTTCCCTGCTGAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CCA 90 bp GGAACCATTTCAGCAGCAGTTTCATCCACAGGGAGACAGAGTAAATGCTCTCTCCTCCTCCTGCCAAGCTaGCGATATAGTCCAGGCCAT +
Preference number: 4 (lower is better)
Translates to: GTISAAVSSTGRQSKCSLLLLPS*RYSPGH
Trigger: ATGGCCTGGACTATATCGCCAGCTTGGCAGGAGGAG...GAGAGAGCATTTACTCTGTCTCCCTGTGGATGAAACTGCTGCTGAAATGGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CCA 90 bp GGCTTCAGCAGGGAACTCCACTCAAGGACGTGGTGTAGGAAGCAAAGACAAACCACCCTTTATGCAGTCTaGCACATAGCTGTCACTCAG +
Preference number: 4 (lower is better)
Translates to: GFSRELHSRTWCRKQRQTTLYAV*HIAVTQ
Trigger: CTGAGTGACAGCTATGTGCCAGACTGCATAAAGGGT...GGTTTGTCTTTGCTTCCTACACCACGTCCTTGAGTGGAGTTCCCTGCTGAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR TCA 90 bp GGCTTCAGCAGGGAACTCCACTCAAGGACGTGGTGTAGGAAGCAAAGACAAACCCAACATCAAACATTATaGCATCGTAGCAAGGCCGTG +
Preference number: 4 (lower is better)
Translates to: GFSRELHSRTWCRKQRQTQHQTL*HRSKAV
Trigger: CACGGCCTTGCTACGATGTCATAATGTTTGATGTTG...GGTTTGTCTTTGCTTCCTACACCACGTCCTTGAGTGGAGTTCCCTGCTGAAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR TCA 90 bp CTATTTATGGTCTTTTGGCATCTTGCTCTGCTATCTCACTTGAGATCACTCCTAGGGGGAACACTGCCTTaGGCCCAGCCAGCACTGAGT +
Preference number: 4 (lower is better)
Translates to: LFMVFWHLALLSHLRSLLGGTLP*AQPALS
Trigger: ACTCAGTGCTGGCTGGGCTCAAGGCAGTGTTCCCCC...TAGGAGTGATCTCAAGTGAGATAGCAGAGCAAGATGCCAAAAGACCATAAATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR TCA 90 bp GGCTTCAGCAGGGAACTCCACTCAAGGACGTGGTGTAGGAAGCAAAGACAAACCGAAAAACAGCCACATTaGTTTGTTCCCCCACTCCAA +
Preference number: 4 (lower is better)
Translates to: GFSRELHSRTWCRKQRQTEKQPH*FVPPLQ
Trigger: TTGGAGTGGGGGAACAAATCAATGTGGCTGTTTTTC...GGTTTGTCTTTGCTTCCTACACCACGTCCTTGAGTGGAGTTCCCTGCTGAAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000367737.9
CDS-3UTR GCA 90 bp GTAGCTGAGTGTGAAACCAAGAAAAATACGAAGCTTCAAAAGTACTGTGCGTTGAATCTCACACACGCTTaGCCCCTCCTCCGCGCCTGC +
Preference number: 4 (lower is better)
Translates to: VAECETKKNTKLQKYCALNLTHA*PLLRAC
Trigger: GCAGGCGCGGAGGAGGGGGCAAGCGTGTGTGAGATT...CAACGCACAGTACTTTTGAAGCTTCGTATTTTTCTTGGTTTCACACTCAGCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR GCA 90 bp GGCTTCAGCAGGGAACTCCACTCAAGGACGTGGTGTAGGAAGCAAAGACAAACCCCCACATCATACAGTTaGTCACTCAGTTCTGAGTTG +
Preference number: 4 (lower is better)
Translates to: GFSRELHSRTWCRKQRQTPTSYS*SLSSEL
Trigger: CAACTCAGAACTGAGTGAGCAACTGTATGATGTGGG...GGTTTGTCTTTGCTTCCTACACCACGTCCTTGAGTGGAGTTCCCTGCTGAAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR GCA 90 bp AGCAAACAAACACTAGAGACTTTAGTCTGCCAGGTCTCTAACATGCAAAGCCATCACCGCTCAAGGGGCTaGAGTCTTGGTGCTGAACGG +
Preference number: 4 (lower is better)
Translates to: SKQTLETLVCQVSNMQSHHRSRG*SLGAER
Trigger: CCGTTCAGCACCAAGACTGCAGCCCCTTGAGCGGTG...ATGGCTTTGCATGTTAGAGACCTGGCAGACTAAAGTCTCTAGTGTTTGTTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR GCA 90 bp CAAAAGCAAACCAGTATAAGTAGAGACGCAATAAAATTTGGATGTCTTGAGTTCGGACTGCCCCGGGGCTaGAGGGAGGTCCTCCGCATC +
Preference number: 4 (lower is better)
Translates to: QKQTSISRDAIKFGCLEFGLPRG*REVLRI
Trigger: GATGCGGAGGACCTCCCTGCAGCCCCGGGGCAGTCC...GAACTCAAGACATCCAAATTTTATTGCGTCTCTACTTATACTGGTTTGCTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CCA 90 bp GGACGTGGTGTAGGAAGCAAAGACAAACCAACCCAAGTGGTACTGAAGAGGACATCTGGGGCCGTCGGGTaGCATTACATTCCTTCATTT +
Preference number: 4 (lower is better)
Translates to: GRGVGSKDKPTQVVLKRTSGAVG*HYIPSF
Trigger: AAATGAAGGAATGTAATGCCACCCGACGGCCCCAGA...TGTCCTCTTCAGTACCACTTGGGTTGGTTTGTCTTTGCTTCCTACACCACGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CCA 90 bp GGACGTGGTGTAGGAAGCAAAGACAAACCAACCCAAGTGGTACTGAAGAGGACATTGTCCAACACCACCTaGAACGAGGCATCAGGAAAC +
Preference number: 4 (lower is better)
Translates to: GRGVGSKDKPTQVVLKRTLSNTT*NEASGN
Trigger: GTTTCCTGATGCCTCGTTCCAGGTGGTGTTGGACAA...TGTCCTCTTCAGTACCACTTGGGTTGGTTTGTCTTTGCTTCCTACACCACGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CCA 90 bp CACTCAGCAAATGTGAGCAAACAAACACTAGAGACTTTAGTCTGCCAGGTCTCTTGGCTGTTGGCCACTTaGTGCACCCTCACCATCCAC +
Preference number: 4 (lower is better)
Translates to: HSANVSKQTLETLVCQVSWLLAT*CTLTIH
Trigger: GTGGATGGTGAGGGTGCACCAAGTGGCCAACAGCCA...AGAGACCTGGCAGACTAAAGTCTCTAGTGTTTGTTTGCTCACATTTGCTGAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000362019.7
CDS-3UTR CCA 90 bp GAAAAAGACAAATGGCTTAGGCTACAAGGTTTGGGTCACCAAGGAAAGCTGTCATCCAACACCTGGTCCTaGCTGTTGGCCACTTGGTGC +
Preference number: 4 (lower is better)
Translates to: EKDKWLRLQGLGHQGKLSSNTWS*LLATWC
Trigger: GCACCAAGTGGCCAACAGCCAGGACCAGGTGTTGGA...TGACAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAGCCATTTGTCTTTTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000362019.7
CDS-3UTR CCA 90 bp GAGAAAAAGACAAATGGCTTAGGCTACAAGGTTTGGGTCACCAAGGAAAGCTGTTCCAACACCTGGTCCTaGCTGTTGGCCACTTGGTGC +
Preference number: 4 (lower is better)
Translates to: EKKTNGLGYKVWVTKESCSNTWS*LLATWC
Trigger: GCACCAAGTGGCCAACAGCCAGGACCAGGTGTTGGA...ACAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAGCCATTTGTCTTTTTCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000362019.7
CDS-3UTR CCA 90 bp AAAAGTACTGTGCGTTGTATTTCTTCATTCTCTGGCAGGCTGGGAGTCCAAGGTTCTGCTTCCAACACCTaGTCCTGGCTGTTGGCCACT +
Preference number: 4 (lower is better)
Translates to: KSTVRCISSFSGRLGVQGSASNT*SWLLAT
Trigger: AGTGGCCAACAGCCAGGACCAGGTGTTGGAAGCAGA...ACCTTGGACTCCCAGCCTGCCAGAGAATGAAGAAATACAACGCACAGTACTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000362019.7
CDS-3UTR CCA 90 bp TTGGAACCATTTCAGCAGCAGTTTCATCCACAGGGAGACAGAGTAAATGCTCTCGGCAGAGCCAGGGACTaGCCTGAACTTGGTCATGAT +
Preference number: 4 (lower is better)
Translates to: LEPFQQQFHPQGDRVNALGRARD*PELGHD
Trigger: ATCATGACCAAGTTCAGGCCAGTCCCTGGCTCTGCC...GAGAGCATTTACTCTGTCTCCCTGTGGATGAAACTGCTGCTGAAATGGTTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000362019.7
CDS-3UTR CCA 90 bp AGAAACCTTACTCTATTTATGGTCTTTTGGCATCTTGCTCTGCTATCTCACTTGGCCTTGCGGCGCAGCTaGCTGCACAGCCAGGCATAC +
Preference number: 4 (lower is better)
Translates to: RNLTLFMVFWHLALLSHLALRRS*LHSQAY
Trigger: GTATGCCTGGCTGTGCAGCCAGCTGCGCCGCAAGGC...CAAGTGAGATAGCAGAGCAAGATGCCAAAAGACCATAAATAGAGTAAGGTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000362019.7
CDS-3UTR CCA 90 bp GGAACCATTTCAGCAGCAGTTTCATCCACAGGGAGACAGAGTAAATGCTCTCTCTGGCCACTTCCAACATaGAGGGATCGATCTCCACAG +
Preference number: 4 (lower is better)
Translates to: GTISAAVSSTGRQSKCSLWPLPT*RDRSPQ
Trigger: CTGTGGAGATCGATCCCTCCATGTTGGAAGTGGCCA...GAGAGAGCATTTACTCTGTCTCCCTGTGGATGAAACTGCTGCTGAAATGGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CCA 90 bp GGAACCATTTCAGCAGCAGTTTCATCCACAGGGAGACAGAGTAAATGCTCTCTCTTGCTCCACAAATGCTaGGGGCGGACAACTCATTCC +
Preference number: 4 (lower is better)
Translates to: GTISAAVSSTGRQSKCSLLLHKC*GRTTHS
Trigger: GGAATGAGTTGTCCGCCCCCAGCATTTGTGGAGCAA...GAGAGAGCATTTACTCTGTCTCCCTGTGGATGAAACTGCTGCTGAAATGGTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CCA 90 bp TTGGAACCATTTCAGCAGCAGTTTCATCCACAGGGAGACAGAGTAAATGCTCTCGGCAGGAGGGCTGCTTaGCCTAAGCAGTCACACAAT +
Preference number: 4 (lower is better)
Translates to: LEPFQQQFHPQGDRVNALGRRAA*PKQSHN
Trigger: ATTGTGTGACTGCTTAGGCCAAGCAGCCCTCCTGCC...GAGAGCATTTACTCTGTCTCCCTGTGGATGAAACTGCTGCTGAAATGGTTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CCA 90 bp GGAACCATTTCAGCAGCAGTTTCATCCACAGGGAGACAGAGTAAATGCTCTCTCCATTCTCTGGCAGGCTaGGAGTCCAAGGTCAGTCTA +
Preference number: 4 (lower is better)
Translates to: GTISAAVSSTGRQSKCSLHSLAG*ESKVSL
Trigger: TAGACTGACCTTGGACTCCCAGCCTGCCAGAGAATG...GAGAGAGCATTTACTCTGTCTCCCTGTGGATGAAACTGCTGCTGAAATGGTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR TCA 90 bp AAAAGTACTGTGCGTTGTATTTCTTCATTCTCTGGCAGGCTGGGAGTCCAAGGTTGTTCCTTCCCCACGTaGAGAGCCCCTCACACTTTT +
Preference number: 4 (lower is better)
Translates to: KSTVRCISSFSGRLGVQGCSFPT*RAPHTF
Trigger: AAAAGTGTGAGGGGCTCTTCACGTGGGGAAGGAACA...ACCTTGGACTCCCAGCCTGCCAGAGAATGAAGAAATACAACGCACAGTACTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR TCA 90 bp AGCAAACAAACACTAGAGACTTTAGTCTGCCAGGTCTCTAACATGCAAAGCCATGGCTTGCGCTGCTCCTaGGCACACAGCTCAAAGATC +
Preference number: 4 (lower is better)
Translates to: SKQTLETLVCQVSNMQSHGLRCS*AHSSKI
Trigger: GATCTTTGAGCTGTGTGCTCAGGAGCAGCGCAAGCC...ATGGCTTTGCATGTTAGAGACCTGGCAGACTAAAGTCTCTAGTGTTTGTTTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000362019.7
CDS-3UTR TCA 90 bp GGAACCATTTCAGCAGCAGTTTCATCCACAGGGAGACAGAGTAAATGCTCTCTCCTTGCACATCCTCAATaGCATAGTCACCGCTCAAGG +
Preference number: 4 (lower is better)
Translates to: GTISAAVSSTGRQSKCSLLAHPQ*HSHRSR
Trigger: CCTTGAGCGGTGACTATGTCATTGAGGATGTGCAAG...GAGAGAGCATTTACTCTGTCTCCCTGTGGATGAAACTGCTGCTGAAATGGTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR TCA 90 bp AAAAGTACTGTGCGTTGTATTTCTTCATTCTCTGGCAGGCTGGGAGTCCAAGGTCCACATTCCTGTTGCTaGGGAAGATCAGTCGACGGA +
Preference number: 4 (lower is better)
Translates to: KSTVRCISSFSGRLGVQGPHSCC*GRSVDG
Trigger: TCCGTCGACTGATCTTCCTCAGCAACAGGAATGTGG...ACCTTGGACTCCCAGCCTGCCAGAGAATGAAGAAATACAACGCACAGTACTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR TCA 90 bp TTGGAACCATTTCAGCAGCAGTTTCATCCACAGGGAGACAGAGTAAATGCTCTCTGCTCAGGGTGCAGCTaGCAGAACAGGATCTCATTC +
Preference number: 4 (lower is better)
Translates to: LEPFQQQFHPQGDRVNALCSGCS*QNRISF
Trigger: GAATGAGATCCTGTTCTGTCAGCTGCACCCTGAGCA...GAGAGCATTTACTCTGTCTCCCTGTGGATGAAACTGCTGCTGAAATGGTTCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR TCA 90 bp TTGTTAAGGCATGCAGTGTGTGCTAGGGGCTTCAGCAGGGAACTCCACTCAAGGCTCTGCTATCTCACTTaGGATCACTCCTATAGAACT +
Preference number: 4 (lower is better)
Translates to: LLRHAVCARGFSRELHSRLCYLT*DHSYRT
Trigger: AGTTCTATAGGAGTGATCTCAAGTGAGATAGCAGAG...CCTTGAGTGGAGTTCCCTGCTGAAGCCCCTAGCACACACTGCATGCCTTAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR TCA 90 bp TTGGAACCATTTCAGCAGCAGTTTCATCCACAGGGAGACAGAGTAAATGCTCTCTCCAAACCCCAGGAATaGCCCTTACACGACAAACGC +
Preference number: 4 (lower is better)
Translates to: LEPFQQQFHPQGDRVNALSKPQE*PLHDKR
Trigger: GCGTTTGTCGTGTAAGGGTCATTCCTGGGGTTTGGA...GAGAGCATTTACTCTGTCTCCCTGTGGATGAAACTGCTGCTGAAATGGTTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000367737.9
CDS-3UTR GCA 90 bp ATTTATGGTCTTTTGGCATCTTGCTCTGCTATCTCACTTGAGATCACTCCTATACCAGCCGCACAGGCTTaGGCTGCTCCTGAGCACACA +
Preference number: 4 (lower is better)
Translates to: IYGLLASCSAISLEITPIPAAQA*AAPEHT
Trigger: TGTGTGCTCAGGAGCAGCGCAAGCCTGTGCGGCTGG...TATAGGAGTGATCTCAAGTGAGATAGCAGAGCAAGATGCCAAAAGACCATAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000362019.7
CDS-3UTR GCA 90 bp AGGTCACATGTAGCTGAGTGTGAAACCAAGAAAAATACGAAGCTTCAAAAGTACCCAGCCGCACAGGCTTaGGCTGCTCCTGAGCACACA +
Preference number: 4 (lower is better)
Translates to: RSHVAECETKKNTKLQKYPAAQA*AAPEHT
Trigger: TGTGTGCTCAGGAGCAGCGCAAGCCTGTGCGGCTGG...GTACTTTTGAAGCTTCGTATTTTTCTTGGTTTCACACTCAGCTACATGTGACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000362019.7
CDS-3UTR GCA 90 bp GTAGCTGAGTGTGAAACCAAGAAAAATACGAAGCTTCAAAAGTACTGTGCGTTGGACAGAAAGGGGACCTaGTGCTGGGTGGGCATCCCA +
Preference number: 4 (lower is better)
Translates to: VAECETKKNTKLQKYCALDRKGT*CWVGIP
Trigger: TGGGATGCCCACCCAGCAGCAGGTCCCCTTTCTGTC...CAACGCACAGTACTTTTGAAGCTTCGTATTTTTCTTGGTTTCACACTCAGCTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR GCA 90 bp TTGGAACCATTTCAGCAGCAGTTTCATCCACAGGGAGACAGAGTAAATGCTCTCGCATCAGCAGGCCGCTaGTTCTTCCTGTCCTTTTTC +
Preference number: 4 (lower is better)
Translates to: LEPFQQQFHPQGDRVNALASAGR*FFLSFF
Trigger: GAAAAAGGACAGGAAGAAGCAGCGGCCTGCTGATGC...GAGAGCATTTACTCTGTCTCCCTGTGGATGAAACTGCTGCTGAAATGGTTCCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR GCA 90 bp GCATCTTGCTCTGCTATCTCACTTGAGATCACTCCTATAGAACTAATAGAGGAACTCTTATCAATGGACTaGCCCGGGGCTGCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: ASCSAISLEITPIELIEELLSMD*PGAAGR
Trigger: CCTCCCTGCAGCCCCGGGGCAGTCCATTGATAAGAG...TTCCTCTATTAGTTCTATAGGAGTGATCTCAAGTGAGATAGCAGAGCAAGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR GCA 90 bp TTGGAACCATTTCAGCAGCAGTTTCATCCACAGGGAGACAGAGTAAATGCTCTCTGCTTCTCCTCCTCCTaGCAAGCTGGCGATATAGTC +
Preference number: 4 (lower is better)
Translates to: LEPFQQQFHPQGDRVNALCFSSS*QAGDIV
Trigger: GACTATATCGCCAGCTTGGCAGGAGGAGGAGAAGCA...GAGAGCATTTACTCTGTCTCCCTGTGGATGAAACTGCTGCTGAAATGGTTCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR GCA 90 bp AAAAGTACTGTGCGTTGTATTTCTTCATTCTCTGGCAGGCTGGGAGTCCAAGGTTGCTTCTCCTCCTCCTaGCAAGCTGGCGATATAGTC +
Preference number: 4 (lower is better)
Translates to: KSTVRCISSFSGRLGVQGCFSSS*QAGDIV
Trigger: GACTATATCGCCAGCTTGGCAGGAGGAGGAGAAGCA...ACCTTGGACTCCCAGCCTGCCAGAGAATGAAGAAATACAACGCACAGTACTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR GCA 90 bp GAGAAAAAGACAAATGGCTTAGGCTACAAGGTTTGGGTCACCAAGGAAAGCTGTGCCAGGTCTCTAACATaGAAAGCCATGGGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: EKKTNGLGYKVWVTKESCARSLT*KAMGPG
Trigger: ACCTGGCCCCATGGCTTTGCATGTTAGAGACCTGGC...ACAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAGCCATTTGTCTTTTTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR GCA 90 bp TTGTTAAGGCATGCAGTGTGTGCTAGGGGCTTCAGCAGGGAACTCCACTCAAGGCTAGAGACTTTAGTCTaGCAGGTCTCTAACATGCAA +
Preference number: 4 (lower is better)
Translates to: LLRHAVCARGFSRELHSRLETLV*QVSNMQ
Trigger: TTGCATGTTAGAGACCTGGCAGACTAAAGTCTCTAG...CCTTGAGTGGAGTTCCCTGCTGAAGCCCCTAGCACACACTGCATGCCTTAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR GCA 90 bp GGACGTGGTGTAGGAAGCAAAGACAAACCAACCCAAGTGGTACTGAAGAGGACAGGTTCATGTTCCTACTaGCGAAGCTGCGTTTTCAAG +
Preference number: 4 (lower is better)
Translates to: GRGVGSKDKPTQVVLKRTGSCSY*RSCVFK
Trigger: CTTGAAAACGCAGCTTCGGCAGTAGGAACATGAACC...TGTCCTCTTCAGTACCACTTGGGTTGGTTTGTCTTTGCTTCCTACACCACGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000367737.9
CDS-3UTR GCA 90 bp AGGGAACTCCACTCAAGGACGTGGTGTAGGAAGCAAAGACAAACCAACCCAAGTGCTTTCTTTCCTCGCTaGTGGAAGAACTTCTCCCAA +
Preference number: 4 (lower is better)
Translates to: RELHSRTWCRKQRQTNPSAFFPR*WKNFSQ
Trigger: TTGGGAGAAGTTCTTCCAGCAGCGAGGAAAGAAAGC...ACTTGGGTTGGTTTGTCTTTGCTTCCTACACCACGTCCTTGAGTGGAGTTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000367737.9
CDS-3UTR CCA 90 bp TTGGAACCATTTCAGCAGCAGTTTCATCCACAGGGAGACAGAGTAAATGCTCTCTTCAAGAAGCTCATCTaGGGCCGTCGGGTGGCATTA +
Preference number: 4 (lower is better)
Translates to: LEPFQQQFHPQGDRVNALFKKLI*GRRVAL
Trigger: TAATGCCACCCGACGGCCCCAGATGAGCTTCTTGAA...GAGAGCATTTACTCTGTCTCCCTGTGGATGAAACTGCTGCTGAAATGGTTCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CCA 90 bp ACAAATGGCTTAGGCTACAAGGTTTGGGTCACCAAGGAAAGCTGTCAAATAATGTGGCTGTTGGCCACTTaGTGCACCCTCACCATCCAC +
Preference number: 4 (lower is better)
Translates to: TNGLGYKVWVTKESCQIMWLLAT*CTLTIH
Trigger: GTGGATGGTGAGGGTGCACCAAGTGGCCAACAGCCA...CATTATTTGACAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAGCCATTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000362019.7
CDS-3UTR CCA 90 bp GAAAAAGACAAATGGCTTAGGCTACAAGGTTTGGGTCACCAAGGAAAGCTGTCATCTGCTTCCAACACCTaGTCCTGGCTGTTGGCCACT +
Preference number: 4 (lower is better)
Translates to: EKDKWLRLQGLGHQGKLSSASNT*SWLLAT
Trigger: AGTGGCCAACAGCCAGGACCAGGTGTTGGAAGCAGA...TGACAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAGCCATTTGTCTTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000362019.7
CDS-3UTR CCA 90 bp AAAAGTACTGTGCGTTGTATTTCTTCATTCTCTGGCAGGCTGGGAGTCCAAGGTCATCCTTCAGCAACCTaGCTTCGGACTGCACCACAT +
Preference number: 4 (lower is better)
Translates to: KSTVRCISSFSGRLGVQGHPSAT*LRTAPH
Trigger: ATGTGGTGCAGTCCGAAGCCAGGTTGCTGAAGGATG...ACCTTGGACTCCCAGCCTGCCAGAGAATGAAGAAATACAACGCACAGTACTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CCA 90 bp GAAAAAGACAAATGGCTTAGGCTACAAGGTTTGGGTCACCAAGGAAAGCTGTCAGGTAACTCTTATCAATaGACTGCCCCGGGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: EKDKWLRLQGLGHQGKLSGNSYQ*TAPGLQ
Trigger: CTGCAGCCCCGGGGCAGTCCATTGATAAGAGTTACC...TGACAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAGCCATTTGTCTTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CCA 90 bp GAAAAAGACAAATGGCTTAGGCTACAAGGTTTGGGTCACCAAGGAAAGCTGTCACTCCTCCTGCCAAGCTaGCGATATAGTCCAGGCCAT +
Preference number: 4 (lower is better)
Translates to: EKDKWLRLQGLGHQGKLSLLLPS*RYSPGH
Trigger: ATGGCCTGGACTATATCGCCAGCTTGGCAGGAGGAG...TGACAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAGCCATTTGTCTTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CCA 90 bp GGAACCATTTCAGCAGCAGTTTCATCCACAGGGAGACAGAGTAAATGCTCTCTCCTAGGAGCTCTGGTGTaGCAAGTTTTTGCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: GTISAAVSSTGRQSKCSLLGALV*QVFAQG
Trigger: ACCCTGAGCAAAAACTTGCCACACCAGAGCTCCTAG...GAGAGAGCATTTACTCTGTCTCCCTGTGGATGAAACTGCTGCTGAAATGGTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CCA 90 bp GAAAAAGACAAATGGCTTAGGCTACAAGGTTTGGGTCACCAAGGAAAGCTGTCAGTCCGCTCCAAAGCCTaGGCTGTTTCTAGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: EKDKWLRLQGLGHQGKLSVRSKA*AVSRSS
Trigger: AGAGCTCCTAGAAACAGCCCAGGCTTTGGAGCGGAC...TGACAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAGCCATTTGTCTTTTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CCA 90 bp AAAAGTACTGTGCGTTGTATTTCTTCATTCTCTGGCAGGCTGGGAGTCCAAGGTGCAACCTCACCAAGCTaGAGGTCACATGTAGCTGAG +
Preference number: 4 (lower is better)
Translates to: KSTVRCISSFSGRLGVQGATSPS*RSHVAE
Trigger: CTCAGCTACATGTGACCTCCAGCTTGGTGAGGTTGC...ACCTTGGACTCCCAGCCTGCCAGAGAATGAAGAAATACAACGCACAGTACTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CCA 90 bp GGACGTGGTGTAGGAAGCAAAGACAAACCAACCCAAGTGGTACTGAAGAGGACACTCCACTCAAGGACGTaGTGTAGGAAGCAAAGACAA +
Preference number: 4 (lower is better)
Translates to: GRGVGSKDKPTQVVLKRTLHSRT*CRKQRQ
Trigger: TTGTCTTTGCTTCCTACACCACGTCCTTGAGTGGAG...TGTCCTCTTCAGTACCACTTGGGTTGGTTTGTCTTTGCTTCCTACACCACGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CCA 90 bp GGACGTGGTGTAGGAAGCAAAGACAAACCAACCCAAGTGGTACTGAAGAGGACAACCCTTTATGCAGTCTaGCACATAGCTGTCACTCAG +
Preference number: 4 (lower is better)
Translates to: GRGVGSKDKPTQVVLKRTTLYAV*HIAVTQ
Trigger: CTGAGTGACAGCTATGTGCCAGACTGCATAAAGGGT...TGTCCTCTTCAGTACCACTTGGGTTGGTTTGTCTTTGCTTCCTACACCACGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR TCA 90 bp CTATTTATGGTCTTTTGGCATCTTGCTCTGCTATCTCACTTGAGATCACTCCTAGCACGCATGGACCACTaGATCTCACACACGCTTGCC +
Preference number: 4 (lower is better)
Translates to: LFMVFWHLALLSHLRSLLARMDH*ISHTLA
Trigger: GGCAAGCGTGTGTGAGATTCAGTGGTCCATGCGTGC...TAGGAGTGATCTCAAGTGAGATAGCAGAGCAAGATGCCAAAAGACCATAAATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR TCA 90 bp AAAAAGACAAATGGCTTAGGCTACAAGGTTTGGGTCACCAAGGAAAGCTGTCAAACAGGCAAGGAGAACTaGGGCTCTGCTTCCAACACC +
Preference number: 4 (lower is better)
Translates to: KKTNGLGYKVWVTKESCQTGKEN*GSASNT
Trigger: GGTGTTGGAAGCAGAGCCTCAGTTCTCCTTGCCTGT...TTGACAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAGCCATTTGTCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000362019.7
CDS-3UTR GCA 90 bp GCATCTTGCTCTGCTATCTCACTTGAGATCACTCCTATAGAACTAATAGAGGAAGGACAGCATCCAGGGTaGCCTTGTCCAACACCACCT +
Preference number: 4 (lower is better)
Translates to: ASCSAISLEITPIELIEEGQHPG*PCPTPP
Trigger: AGGTGGTGTTGGACAAGGGCACCCTGGATGCTGTCC...TTCCTCTATTAGTTCTATAGGAGTGATCTCAAGTGAGATAGCAGAGCAAGATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR GCA 90 bp GTAGCTGAGTGTGAAACCAAGAAAAATACGAAGCTTCAAAAGTACTGTGCGTTGGGACAGCATCCAGGGTaGCCTTGTCCAACACCACCT +
Preference number: 4 (lower is better)
Translates to: VAECETKKNTKLQKYCALGQHPG*PCPTPP
Trigger: AGGTGGTGTTGGACAAGGGCACCCTGGATGCTGTCC...CAACGCACAGTACTTTTGAAGCTTCGTATTTTTCTTGGTTTCACACTCAGCTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR GCA 90 bp CTATTTATGGTCTTTTGGCATCTTGCTCTGCTATCTCACTTGAGATCACTCCTATCCGGCCCTCATCCATaGCAAAGAGCCACTCGGTCT +
Preference number: 4 (lower is better)
Translates to: LFMVFWHLALLSHLRSLLSGPHP*QRATRS
Trigger: AGACCGAGTGGCTCTTTGGCATGGATGAGGGCCGGA...TAGGAGTGATCTCAAGTGAGATAGCAGAGCAAGATGCCAAAAGACCATAAATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR GCA 90 bp ATTTATGGTCTTTTGGCATCTTGCTCTGCTATCTCACTTGAGATCACTCCTATAGACAGAAAGGGGACCTaGTGCTGGGTGGGCATCCCA +
Preference number: 4 (lower is better)
Translates to: IYGLLASCSAISLEITPIDRKGT*CWVGIP
Trigger: TGGGATGCCCACCCAGCAGCAGGTCCCCTTTCTGTC...TATAGGAGTGATCTCAAGTGAGATAGCAGAGCAAGATGCCAAAAGACCATAAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR GCA 90 bp AGGTCACATGTAGCTGAGTGTGAAACCAAGAAAAATACGAAGCTTCAAAAGTACCACCGCTCAAGGGGCTaGAGTCTTGGTGCTGAACGG +
Preference number: 4 (lower is better)
Translates to: RSHVAECETKKNTKLQKYHRSRG*SLGAER
Trigger: CCGTTCAGCACCAAGACTGCAGCCCCTTGAGCGGTG...GTACTTTTGAAGCTTCGTATTTTTCTTGGTTTCACACTCAGCTACATGTGACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR GCA 90 bp GGACGTGGTGTAGGAAGCAAAGACAAACCAACCCAAGTGGTACTGAAGAGGACAGGTCTTTTGGCATCTTaGTCTGCTATCTCACTTGAG +
Preference number: 4 (lower is better)
Translates to: GRGVGSKDKPTQVVLKRTGLLAS*SAISLE
Trigger: CTCAAGTGAGATAGCAGAGCAAGATGCCAAAAGACC...TGTCCTCTTCAGTACCACTTGGGTTGGTTTGTCTTTGCTTCCTACACCACGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR GCA 90 bp AGCAAACAAACACTAGAGACTTTAGTCTGCCAGGTCTCTAACATGCAAAGCCATGCCAGGTCTCTAACATaGAAAGCCATGGGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: SKQTLETLVCQVSNMQSHARSLT*KAMGPG
Trigger: ACCTGGCCCCATGGCTTTGCATGTTAGAGACCTGGC...ATGGCTTTGCATGTTAGAGACCTGGCAGACTAAAGTCTCTAGTGTTTGTTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR GCA 90 bp AAAAGTACTGTGCGTTGTATTTCTTCATTCTCTGGCAGGCTGGGAGTCCAAGGTTGCCACCACCCTTTATaGAGTCTGGCACATAGCTGT +
Preference number: 4 (lower is better)
Translates to: KSTVRCISSFSGRLGVQGCHHPL*SLAHSC
Trigger: ACAGCTATGTGCCAGACTGCATAAAGGGTGGTGGCA...ACCTTGGACTCCCAGCCTGCCAGAGAATGAAGAAATACAACGCACAGTACTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR GCA 90 bp AAAAAGACAAATGGCTTAGGCTACAAGGTTTGGGTCACCAAGGAAAGCTGTCAACAGGCTCCGGGACACTaGAGTGGGAATTCTTTCCAC +
Preference number: 4 (lower is better)
Translates to: KKTNGLGYKVWVTKESCQQAPGH*SGNSFH
Trigger: GTGGAAAGAATTCCCACTGCAGTGTCCCGGAGCCTG...TTGACAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAGCCATTTGTCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000367737.9
CDS-3UTR CCA 90 bp AAAAGTACTGTGCGTTGTATTTCTTCATTCTCTGGCAGGCTGGGAGTCCAAGGTTTGTCCAACACCACCTaGAACGAGGCATCAGGAAAC +
Preference number: 4 (lower is better)
Translates to: KSTVRCISSFSGRLGVQGLSNTT*NEASGN
Trigger: GTTTCCTGATGCCTCGTTCCAGGTGGTGTTGGACAA...ACCTTGGACTCCCAGCCTGCCAGAGAATGAAGAAATACAACGCACAGTACTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CCA 90 bp AGGTCACATGTAGCTGAGTGTGAAACCAAGAAAAATACGAAGCTTCAAAAGTACCCTGGTCCTGGCTGTTaGCCACTTGGTGCACCCTCA +
Preference number: 4 (lower is better)
Translates to: RSHVAECETKKNTKLQKYPGPGC*PLGAPS
Trigger: TGAGGGTGCACCAAGTGGCCAACAGCCAGGACCAGG...GTACTTTTGAAGCTTCGTATTTTTCTTGGTTTCACACTCAGCTACATGTGACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000362019.7
CDS-3UTR CCA 90 bp GTAGCTGAGTGTGAAACCAAGAAAAATACGAAGCTTCAAAAGTACTGTGCGTTGGCGATGGTTTCACAGTaGGGCTGTCCACCACGTGGA +
Preference number: 4 (lower is better)
Translates to: VAECETKKNTKLQKYCALAMVSQ*GCPPRG
Trigger: TCCACGTGGTGGACAGCCCCACTGTGAAACCATCGC...CAACGCACAGTACTTTTGAAGCTTCGTATTTTTCTTGGTTTCACACTCAGCTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000362019.7
CDS-3UTR CCA 90 bp GCATCTTGCTCTGCTATCTCACTTGAGATCACTCCTATAGAACTAATAGAGGAAGCGATGGTTTCACAGTaGGGCTGTCCACCACGTGGA +
Preference number: 4 (lower is better)
Translates to: ASCSAISLEITPIELIEEAMVSQ*GCPPRG
Trigger: TCCACGTGGTGGACAGCCCCACTGTGAAACCATCGC...TTCCTCTATTAGTTCTATAGGAGTGATCTCAAGTGAGATAGCAGAGCAAGATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000362019.7
CDS-3UTR CCA 90 bp AAAAAGACAAATGGCTTAGGCTACAAGGTTTGGGTCACCAAGGAAAGCTGTCAAGGTAACTCTTATCAATaGACTGCCCCGGGGCTGCAG +
Preference number: 4 (lower is better)
Translates to: KKTNGLGYKVWVTKESCQGNSYQ*TAPGLQ
Trigger: CTGCAGCCCCGGGGCAGTCCATTGATAAGAGTTACC...TTGACAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAGCCATTTGTCTTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CCA 90 bp ACAAATGGCTTAGGCTACAAGGTTTGGGTCACCAAGGAAAGCTGTCAAATAATGAGCCAAACCACTGGGTaGCCACTTCCAACATGGAGG +
Preference number: 4 (lower is better)
Translates to: TNGLGYKVWVTKESCQIMSQTTG*PLPTWR
Trigger: CCTCCATGTTGGAAGTGGCCACCCAGTGGTTTGGCT...CATTATTTGACAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAGCCATTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CCA 90 bp TTGGAACCATTTCAGCAGCAGTTTCATCCACAGGGAGACAGAGTAAATGCTCTCTTCATTCGGTCACTCTaGGAGAAGCCAAACCACTGG +
Preference number: 4 (lower is better)
Translates to: LEPFQQQFHPQGDRVNALFIRSL*EKPNHW
Trigger: CCAGTGGTTTGGCTTCTCCCAGAGTGACCGAATGAA...GAGAGCATTTACTCTGTCTCCCTGTGGATGAAACTGCTGCTGAAATGGTTCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CCA 90 bp ACAAATGGCTTAGGCTACAAGGTTTGGGTCACCAAGGAAAGCTGTCAAATAATGCTCCTCCTGCCAAGCTaGCGATATAGTCCAGGCCAT +
Preference number: 4 (lower is better)
Translates to: TNGLGYKVWVTKESCQIMLLLPS*RYSPGH
Trigger: ATGGCCTGGACTATATCGCCAGCTTGGCAGGAGGAG...CATTATTTGACAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAGCCATTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CCA 90 bp AGGGAACTCCACTCAAGGACGTGGTGTAGGAAGCAAAGACAAACCAACCCAAGTACTCATTCCCAGTGTTaGGTCCTTACTGTCAACATC +
Preference number: 4 (lower is better)
Translates to: RELHSRTWCRKQRQTNPSTHSQC*VLTVNI
Trigger: GATGTTGACAGTAAGGACCCAACACTGGGAATGAGT...ACTTGGGTTGGTTTGTCTTTGCTTCCTACACCACGTCCTTGAGTGGAGTTCCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CCA 90 bp TTGGAACCATTTCAGCAGCAGTTTCATCCACAGGGAGACAGAGTAAATGCTCTCCTAGGAGCTCTGGTGTaGCAAGTTTTTGCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: LEPFQQQFHPQGDRVNALLGALV*QVFAQG
Trigger: ACCCTGAGCAAAAACTTGCCACACCAGAGCTCCTAG...GAGAGCATTTACTCTGTCTCCCTGTGGATGAAACTGCTGCTGAAATGGTTCCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CCA 90 bp ACAAATGGCTTAGGCTACAAGGTTTGGGTCACCAAGGAAAGCTGTCAAATAATGGGCAGGAGGGCTGCTTaGCCTAAGCAGTCACACAAT +
Preference number: 4 (lower is better)
Translates to: TNGLGYKVWVTKESCQIMGRRAA*PKQSHN
Trigger: ATTGTGTGACTGCTTAGGCCAAGCAGCCCTCCTGCC...CATTATTTGACAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAGCCATTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CCA 90 bp GGAACCATTTCAGCAGCAGTTTCATCCACAGGGAGACAGAGTAAATGCTCTCTCACCCTTTATGCAGTCTaGCACATAGCTGTCACTCAG +
Preference number: 4 (lower is better)
Translates to: GTISAAVSSTGRQSKCSLTLYAV*HIAVTQ
Trigger: CTGAGTGACAGCTATGTGCCAGACTGCATAAAGGGT...GAGAGAGCATTTACTCTGTCTCCCTGTGGATGAAACTGCTGCTGAAATGGTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR TCA 90 bp ATTTATGGTCTTTTGGCATCTTGCTCTGCTATCTCACTTGAGATCACTCCTATAGCACGCATGGACCACTaGATCTCACACACGCTTGCC +
Preference number: 4 (lower is better)
Translates to: IYGLLASCSAISLEITPIARMDH*ISHTLA
Trigger: GGCAAGCGTGTGTGAGATTCAGTGGTCCATGCGTGC...TATAGGAGTGATCTCAAGTGAGATAGCAGAGCAAGATGCCAAAAGACCATAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR TCA 90 bp ATTTATGGTCTTTTGGCATCTTGCTCTGCTATCTCACTTGAGATCACTCCTATAGGCTTGCGCTGCTCCTaGGCACACAGCTCAAAGATC +
Preference number: 4 (lower is better)
Translates to: IYGLLASCSAISLEITPIGLRCS*AHSSKI
Trigger: GATCTTTGAGCTGTGTGCTCAGGAGCAGCGCAAGCC...TATAGGAGTGATCTCAAGTGAGATAGCAGAGCAAGATGCCAAAAGACCATAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000362019.7
CDS-3UTR TCA 90 bp CACTCAGCAAATGTGAGCAAACAAACACTAGAGACTTTAGTCTGCCAGGTCTCTCTTGCACATCCTCAATaGCATAGTCACCGCTCAAGG +
Preference number: 4 (lower is better)
Translates to: HSANVSKQTLETLVCQVSLAHPQ*HSHRSR
Trigger: CCTTGAGCGGTGACTATGTCATTGAGGATGTGCAAG...AGAGACCTGGCAGACTAAAGTCTCTAGTGTTTGTTTGCTCACATTTGCTGAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR TCA 90 bp AAAAAGACAAATGGCTTAGGCTACAAGGTTTGGGTCACCAAGGAAAGCTGTCAACCACATTCCTGTTGCTaGGGAAGATCAGTCGACGGA +
Preference number: 4 (lower is better)
Translates to: KKTNGLGYKVWVTKESCQPHSCC*GRSVDG
Trigger: TCCGTCGACTGATCTTCCTCAGCAACAGGAATGTGG...TTGACAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAGCCATTTGTCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR TCA 90 bp CAAAAGCAAACCAGTATAAGTAGAGACGCAATAAAATTTGGATGTCTTGAGTTCGGGGGAACACTGCCTTaGGCCCAGCCAGCACTGAGT +
Preference number: 4 (lower is better)
Translates to: QKQTSISRDAIKFGCLEFGGTLP*AQPALS
Trigger: ACTCAGTGCTGGCTGGGCTCAAGGCAGTGTTCCCCC...GAACTCAAGACATCCAAATTTTATTGCGTCTCTACTTATACTGGTTTGCTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR TCA 90 bp AGCAAACAAACACTAGAGACTTTAGTCTGCCAGGTCTCTAACATGCAAAGCCATGGATGTCTTGAGTTCTaGGGGGCTTGCACACACTTG +
Preference number: 4 (lower is better)
Translates to: SKQTLETLVCQVSNMQSHGCLEF*GACTHL
Trigger: CAAGTGTGTGCAAGCCCCTCAGAACTCAAGACATCC...ATGGCTTTGCATGTTAGAGACCTGGCAGACTAAAGTCTCTAGTGTTTGTTTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR GCA 90 bp AGCAAACAAACACTAGAGACTTTAGTCTGCCAGGTCTCTAACATGCAAAGCCATGGAGAAGTGGCCCACTaGTTTCTTCAGGATGTGAGC +
Preference number: 4 (lower is better)
Translates to: SKQTLETLVCQVSNMQSHGEVAH*FLQDVS
Trigger: GCTCACATCCTGAAGAAAGCAGTGGGCCACTTCTCC...ATGGCTTTGCATGTTAGAGACCTGGCAGACTAAAGTCTCTAGTGTTTGTTTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000362019.7
CDS-3UTR GCA 90 bp CAAAAGCAAACCAGTATAAGTAGAGACGCAATAAAATTTGGATGTCTTGAGTTCCACAGCCAGGCATACTaGTGTCGCTCCTGCACCGCC +
Preference number: 4 (lower is better)
Translates to: QKQTSISRDAIKFGCLEFHSQAY*CRSCTA
Trigger: GGCGGTGCAGGAGCGACAGCAGTATGCCTGGCTGTG...GAACTCAAGACATCCAAATTTTATTGCGTCTCTACTTATACTGGTTTGCTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000362019.7
CDS-3UTR GCA 90 bp AAAAGTACTGTGCGTTGTATTTCTTCATTCTCTGGCAGGCTGGGAGTCCAAGGTCTTGGATGTGGTCCATaGTTTCATACTGCTGACCTC +
Preference number: 4 (lower is better)
Translates to: KSTVRCISSFSGRLGVQGLGCGP*FHTADL
Trigger: GAGGTCAGCAGTATGAAAGCATGGACCACATCCAAG...ACCTTGGACTCCCAGCCTGCCAGAGAATGAAGAAATACAACGCACAGTACTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR GCA 90 bp TTGGAACCATTTCAGCAGCAGTTTCATCCACAGGGAGACAGAGTAAATGCTCTCCTTGGATGTGGTCCATaGTTTCATACTGCTGACCTC +
Preference number: 4 (lower is better)
Translates to: LEPFQQQFHPQGDRVNALLGCGP*FHTADL
Trigger: GAGGTCAGCAGTATGAAAGCATGGACCACATCCAAG...GAGAGCATTTACTCTGTCTCCCTGTGGATGAAACTGCTGCTGAAATGGTTCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR GCA 90 bp ACAAATGGCTTAGGCTACAAGGTTTGGGTCACCAAGGAAAGCTGTCAAATAATGAACCTGGCTTCGGACTaGACCACATTCCTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: TNGLGYKVWVTKESCQIMNLASD*TTFLLL
Trigger: CAGCAACAGGAATGTGGTGCAGTCCGAAGCCAGGTT...CATTATTTGACAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAGCCATTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR GCA 90 bp GAAAAAGACAAATGGCTTAGGCTACAAGGTTTGGGTCACCAAGGAAAGCTGTCAAGATTGCTCCACAAATaGTGGGGGCGGACAACTCAT +
Preference number: 4 (lower is better)
Translates to: EKDKWLRLQGLGHQGKLSRLLHK*WGRTTH
Trigger: ATGAGTTGTCCGCCCCCAGCATTTGTGGAGCAATCT...TGACAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAGCCATTTGTCTTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR GCA 90 bp GGAACCATTTCAGCAGCAGTTTCATCCACAGGGAGACAGAGTAAATGCTCTCTCTTCTGTAGAAAAGATTaGTCCACAAATGCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: GTISAAVSSTGRQSKCSLFCRKD*STNAGG
Trigger: GCCCCCAGCATTTGTGGAGCAATCTTTTCTACAGAA...GAGAGAGCATTTACTCTGTCTCCCTGTGGATGAAACTGCTGCTGAAATGGTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR GCA 90 bp GAGAAAAAGACAAATGGCTTAGGCTACAAGGTTTGGGTCACCAAGGAAAGCTGTTGCCACCACCCTTTATaGAGTCTGGCACATAGCTGT +
Preference number: 4 (lower is better)
Translates to: EKKTNGLGYKVWVTKESCCHHPL*SLAHSC
Trigger: ACAGCTATGTGCCAGACTGCATAAAGGGTGGTGGCA...ACAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAGCCATTTGTCTTTTTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR GCA 90 bp GAGAAAAAGACAAATGGCTTAGGCTACAAGGTTTGGGTCACCAAGGAAAGCTGTTCCTACTGCCGAAGCTaGGTTTTCAAGACTCCCCTA +
Preference number: 4 (lower is better)
Translates to: EKKTNGLGYKVWVTKESCSYCRS*VFKTPL
Trigger: TAGGGGAGTCTTGAAAACGCAGCTTCGGCAGTAGGA...ACAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAGCCATTTGTCTTTTTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000367737.9
CDS-3UTR GCA 90 bp TTGGAACCATTTCAGCAGCAGTTTCATCCACAGGGAGACAGAGTAAATGCTCTCGCTTTCTTTCCTCGCTaGTGGAAGAACTTCTCCCAA +
Preference number: 4 (lower is better)
Translates to: LEPFQQQFHPQGDRVNALAFFPR*WKNFSQ
Trigger: TTGGGAGAAGTTCTTCCAGCAGCGAGGAAAGAAAGC...GAGAGCATTTACTCTGTCTCCCTGTGGATGAAACTGCTGCTGAAATGGTTCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000367737.9
CDS-3UTR CCA 90 bp GAGAAAAAGACAAATGGCTTAGGCTACAAGGTTTGGGTCACCAAGGAAAGCTGTCGACAAACGCACGCATaGACCACTGAATCTCACACA +
Preference number: 4 (lower is better)
Translates to: EKKTNGLGYKVWVTKESCRQTHA*TTESHT
Trigger: TGTGTGAGATTCAGTGGTCCATGCGTGCGTTTGTCG...ACAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAGCCATTTGTCTTTTTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CCA 90 bp GTAGCTGAGTGTGAAACCAAGAAAAATACGAAGCTTCAAAAGTACTGTGCGTTGGGCAGAGCCAGGGACTaGCCTGAACTTGGTCATGAT +
Preference number: 4 (lower is better)
Translates to: VAECETKKNTKLQKYCALGRARD*PELGHD
Trigger: ATCATGACCAAGTTCAGGCCAGTCCCTGGCTCTGCC...CAACGCACAGTACTTTTGAAGCTTCGTATTTTTCTTGGTTTCACACTCAGCTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000362019.7
CDS-3UTR CCA 90 bp AAAAAGACAAATGGCTTAGGCTACAAGGTTTGGGTCACCAAGGAAAGCTGTCAAGCCGACAGCTCAGCTTaGATGTGGTCCATGCTTTCA +
Preference number: 4 (lower is better)
Translates to: KKTNGLGYKVWVTKESCQADSSA*MWSMLS
Trigger: TGAAAGCATGGACCACATCCAAGCTGAGCTGTCGGC...TTGACAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAGCCATTTGTCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CCA 90 bp AGCAAACAAACACTAGAGACTTTAGTCTGCCAGGTCTCTAACATGCAAAGCCATCATCCTTCAGCAACCTaGCTTCGGACTGCACCACAT +
Preference number: 4 (lower is better)
Translates to: SKQTLETLVCQVSNMQSHHPSAT*LRTAPH
Trigger: ATGTGGTGCAGTCCGAAGCCAGGTTGCTGAAGGATG...ATGGCTTTGCATGTTAGAGACCTGGCAGACTAAAGTCTCTAGTGTTTGTTTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CCA 90 bp GTAGCTGAGTGTGAAACCAAGAAAAATACGAAGCTTCAAAAGTACTGTGCGTTGAGCCAAACCACTGGGTaGCCACTTCCAACATGGAGG +
Preference number: 4 (lower is better)
Translates to: VAECETKKNTKLQKYCALSQTTG*PLPTWR
Trigger: CCTCCATGTTGGAAGTGGCCACCCAGTGGTTTGGCT...CAACGCACAGTACTTTTGAAGCTTCGTATTTTTCTTGGTTTCACACTCAGCTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CCA 90 bp GAGAAAAAGACAAATGGCTTAGGCTACAAGGTTTGGGTCACCAAGGAAAGCTGTAGGCCATCTGCAATGTaGACCTTCATTCGGTCACTC +
Preference number: 4 (lower is better)
Translates to: EKKTNGLGYKVWVTKESCRPSAM*TFIRSL
Trigger: GAGTGACCGAATGAAGGTCCACATTGCAGATGGCCT...ACAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAGCCATTTGTCTTTTTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CCA 90 bp CACTCAGCAAATGTGAGCAAACAAACACTAGAGACTTTAGTCTGCCAGGTCTCTCTAGGAGCTCTGGTGTaGCAAGTTTTTGCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: HSANVSKQTLETLVCQVSLGALV*QVFAQG
Trigger: ACCCTGAGCAAAAACTTGCCACACCAGAGCTCCTAG...AGAGACCTGGCAGACTAAAGTCTCTAGTGTTTGTTTGCTCACATTTGCTGAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CCA 90 bp GTAGCTGAGTGTGAAACCAAGAAAAATACGAAGCTTCAAAAGTACTGTGCGTTGGTCCGCTCCAAAGCCTaGGCTGTTTCTAGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: VAECETKKNTKLQKYCALVRSKA*AVSRSS
Trigger: AGAGCTCCTAGAAACAGCCCAGGCTTTGGAGCGGAC...CAACGCACAGTACTTTTGAAGCTTCGTATTTTTCTTGGTTTCACACTCAGCTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CCA 90 bp CTATTTATGGTCTTTTGGCATCTTGCTCTGCTATCTCACTTGAGATCACTCCTAGGCAGGAGGGCTGCTTaGCCTAAGCAGTCACACAAT +
Preference number: 4 (lower is better)
Translates to: LFMVFWHLALLSHLRSLLGRRAA*PKQSHN
Trigger: ATTGTGTGACTGCTTAGGCCAAGCAGCCCTCCTGCC...TAGGAGTGATCTCAAGTGAGATAGCAGAGCAAGATGCCAAAAGACCATAAATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CCA 90 bp AAAAAGACAAATGGCTTAGGCTACAAGGTTTGGGTCACCAAGGAAAGCTGTCAACATTCTCTGGCAGGCTaGGAGTCCAAGGTCAGTCTA +
Preference number: 4 (lower is better)
Translates to: KKTNGLGYKVWVTKESCQHSLAG*ESKVSL
Trigger: TAGACTGACCTTGGACTCCCAGCCTGCCAGAGAATG...TTGACAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAGCCATTTGTCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CCA 90 bp AAAAAGACAAATGGCTTAGGCTACAAGGTTTGGGTCACCAAGGAAAGCTGTCAAGCAACCTCACCAAGCTaGAGGTCACATGTAGCTGAG +
Preference number: 4 (lower is better)
Translates to: KKTNGLGYKVWVTKESCQATSPS*RSHVAE
Trigger: CTCAGCTACATGTGACCTCCAGCTTGGTGAGGTTGC...TTGACAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAGCCATTTGTCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR TCA 90 bp AGAAACCTTACTCTATTTATGGTCTTTTGGCATCTTGCTCTGCTATCTCACTTGACAGGCAAGGAGAACTaGGGCTCTGCTTCCAACACC +
Preference number: 4 (lower is better)
Translates to: RNLTLFMVFWHLALLSHLTGKEN*GSASNT
Trigger: GGTGTTGGAAGCAGAGCCTCAGTTCTCCTTGCCTGT...CAAGTGAGATAGCAGAGCAAGATGCCAAAAGACCATAAATAGAGTAAGGTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000362019.7
CDS-3UTR TCA 90 bp CAAAAGCAAACCAGTATAAGTAGAGACGCAATAAAATTTGGATGTCTTGAGTTCCTGCAGTCTTGGTGCTaGACGGTCCGGACCCCAATG +
Preference number: 4 (lower is better)
Translates to: QKQTSISRDAIKFGCLEFLQSWC*TVRTPM
Trigger: CATTGGGGTCCGGACCGTTCAGCACCAAGACTGCAG...GAACTCAAGACATCCAAATTTTATTGCGTCTCTACTTATACTGGTTTGCTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR TCA 90 bp AGCAAACAAACACTAGAGACTTTAGTCTGCCAGGTCTCTAACATGCAAAGCCATCTTGCACATCCTCAATaGCATAGTCACCGCTCAAGG +
Preference number: 4 (lower is better)
Translates to: SKQTLETLVCQVSNMQSHLAHPQ*HSHRSR
Trigger: CCTTGAGCGGTGACTATGTCATTGAGGATGTGCAAG...ATGGCTTTGCATGTTAGAGACCTGGCAGACTAAAGTCTCTAGTGTTTGTTTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR TCA 90 bp GCATCTTGCTCTGCTATCTCACTTGAGATCACTCCTATAGAACTAATAGAGGAACCACATTCCTGTTGCTaGGGAAGATCAGTCGACGGA +
Preference number: 4 (lower is better)
Translates to: ASCSAISLEITPIELIEEPHSCC*GRSVDG
Trigger: TCCGTCGACTGATCTTCCTCAGCAACAGGAATGTGG...TTCCTCTATTAGTTCTATAGGAGTGATCTCAAGTGAGATAGCAGAGCAAGATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR TCA 90 bp GAAAAAGACAAATGGCTTAGGCTACAAGGTTTGGGTCACCAAGGAAAGCTGTCATTCTTCTGGGCTTTGTaGGACACATCCTTCAGCAAC +
Preference number: 4 (lower is better)
Translates to: EKDKWLRLQGLGHQGKLSFFWAL*DTSFSN
Trigger: GTTGCTGAAGGATGTGTCTCACAAAGCCCAGAAGAA...TGACAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAGCCATTTGTCTTTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR TCA 90 bp AGCAAACAAACACTAGAGACTTTAGTCTGCCAGGTCTCTAACATGCAAAGCCATCAACCCAAGTGGTACTaGAGAGGACAAGATGGGAAG +
Preference number: 4 (lower is better)
Translates to: SKQTLETLVCQVSNMQSHQPKWY*RGQDGK
Trigger: CTTCCCATCTTGTCCTCTTCAGTACCACTTGGGTTG...ATGGCTTTGCATGTTAGAGACCTGGCAGACTAAAGTCTCTAGTGTTTGTTTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR TCA 90 bp GGAACCATTTCAGCAGCAGTTTCATCCACAGGGAGACAGAGTAAATGCTCTCTCATACACTCCCTCCACTaGGAAAAAGACAAATGGCTT +
Preference number: 4 (lower is better)
Translates to: GTISAAVSSTGRQSKCSLIHSLH*EKDKWL
Trigger: AAGCCATTTGTCTTTTTCTCAGTGGAGGGAGTGTAT...GAGAGAGCATTTACTCTGTCTCCCTGTGGATGAAACTGCTGCTGAAATGGTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR GCA 90 bp CAAAAGCAAACCAGTATAAGTAGAGACGCAATAAAATTTGGATGTCTTGAGTTCCACCGCTCAAGGGGCTaGAGTCTTGGTGCTGAACGG +
Preference number: 4 (lower is better)
Translates to: QKQTSISRDAIKFGCLEFHRSRG*SLGAER
Trigger: CCGTTCAGCACCAAGACTGCAGCCCCTTGAGCGGTG...GAACTCAAGACATCCAAATTTTATTGCGTCTCTACTTATACTGGTTTGCTTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR GCA 90 bp CTATTTATGGTCTTTTGGCATCTTGCTCTGCTATCTCACTTGAGATCACTCCTAGCATCAGCAGGCCGCTaGTTCTTCCTGTCCTTTTTC +
Preference number: 4 (lower is better)
Translates to: LFMVFWHLALLSHLRSLLASAGR*FFLSFF
Trigger: GAAAAAGGACAGGAAGAAGCAGCGGCCTGCTGATGC...TAGGAGTGATCTCAAGTGAGATAGCAGAGCAAGATGCCAAAAGACCATAAATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR GCA 90 bp ACAAATGGCTTAGGCTACAAGGTTTGGGTCACCAAGGAAAGCTGTCAAATAATGAGATTGCTCCACAAATaGTGGGGGCGGACAACTCAT +
Preference number: 4 (lower is better)
Translates to: TNGLGYKVWVTKESCQIMRLLHK*WGRTTH
Trigger: ATGAGTTGTCCGCCCCCAGCATTTGTGGAGCAATCT...CATTATTTGACAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAGCCATTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR GCA 90 bp AAAAGTACTGTGCGTTGTATTTCTTCATTCTCTGGCAGGCTGGGAGTCCAAGGTGGTCTTTTGGCATCTTaGTCTGCTATCTCACTTGAG +
Preference number: 4 (lower is better)
Translates to: KSTVRCISSFSGRLGVQGGLLAS*SAISLE
Trigger: CTCAAGTGAGATAGCAGAGCAAGATGCCAAAAGACC...ACCTTGGACTCCCAGCCTGCCAGAGAATGAAGAAATACAACGCACAGTACTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CCA 90 bp AAAAAGACAAATGGCTTAGGCTACAAGGTTTGGGTCACCAAGGAAAGCTGTCAACGACAAACGCACGCATaGACCACTGAATCTCACACA +
Preference number: 4 (lower is better)
Translates to: KKTNGLGYKVWVTKESCQRQTHA*TTESHT
Trigger: TGTGTGAGATTCAGTGGTCCATGCGTGCGTTTGTCG...TTGACAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAGCCATTTGTCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CCA 90 bp ACAAATGGCTTAGGCTACAAGGTTTGGGTCACCAAGGAAAGCTGTCAAATAATGCGACAAACGCACGCATaGACCACTGAATCTCACACA +
Preference number: 4 (lower is better)
Translates to: TNGLGYKVWVTKESCQIMRQTHA*TTESHT
Trigger: TGTGTGAGATTCAGTGGTCCATGCGTGCGTTTGTCG...CATTATTTGACAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAGCCATTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CCA 90 bp AGCAAACAAACACTAGAGACTTTAGTCTGCCAGGTCTCTAACATGCAAAGCCATTTGTCCAACACCACCTaGAACGAGGCATCAGGAAAC +
Preference number: 4 (lower is better)
Translates to: SKQTLETLVCQVSNMQSHLSNTT*NEASGN
Trigger: GTTTCCTGATGCCTCGTTCCAGGTGGTGTTGGACAA...ATGGCTTTGCATGTTAGAGACCTGGCAGACTAAAGTCTCTAGTGTTTGTTTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CCA 90 bp GTAGCTGAGTGTGAAACCAAGAAAAATACGAAGCTTCAAAAGTACTGTGCGTTGGCCGACAGCTCAGCTTaGATGTGGTCCATGCTTTCA +
Preference number: 4 (lower is better)
Translates to: VAECETKKNTKLQKYCALADSSA*MWSMLS
Trigger: TGAAAGCATGGACCACATCCAAGCTGAGCTGTCGGC...CAACGCACAGTACTTTTGAAGCTTCGTATTTTTCTTGGTTTCACACTCAGCTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CCA 90 bp GTAGCTGAGTGTGAAACCAAGAAAAATACGAAGCTTCAAAAGTACTGTGCGTTGTGGCCACTTCCAACATaGAGGGATCGATCTCCACAG +
Preference number: 4 (lower is better)
Translates to: VAECETKKNTKLQKYCALWPLPT*RDRSPQ
Trigger: CTGTGGAGATCGATCCCTCCATGTTGGAAGTGGCCA...CAACGCACAGTACTTTTGAAGCTTCGTATTTTTCTTGGTTTCACACTCAGCTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CCA 90 bp AGGTCACATGTAGCTGAGTGTGAAACCAAGAAAAATACGAAGCTTCAAAAGTACAGCCAAACCACTGGGTaGCCACTTCCAACATGGAGG +
Preference number: 4 (lower is better)
Translates to: RSHVAECETKKNTKLQKYSQTTG*PLPTWR
Trigger: CCTCCATGTTGGAAGTGGCCACCCAGTGGTTTGGCT...GTACTTTTGAAGCTTCGTATTTTTCTTGGTTTCACACTCAGCTACATGTGACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CCA 90 bp CTATTTATGGTCTTTTGGCATCTTGCTCTGCTATCTCACTTGAGATCACTCCTAGAGAAGCCAAACCACTaGGTGGCCACTTCCAACATG +
Preference number: 4 (lower is better)
Translates to: LFMVFWHLALLSHLRSLLEKPNH*VATSNM
Trigger: CATGTTGGAAGTGGCCACCCAGTGGTTTGGCTTCTC...TAGGAGTGATCTCAAGTGAGATAGCAGAGCAAGATGCCAAAAGACCATAAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR TCA 90 bp AGGTCACATGTAGCTGAGTGTGAAACCAAGAAAAATACGAAGCTTCAAAAGTACTGTTCCTTCCCCACGTaGAGAGCCCCTCACACTTTT +
Preference number: 4 (lower is better)
Translates to: RSHVAECETKKNTKLQKYCSFPT*RAPHTF
Trigger: AAAAGTGTGAGGGGCTCTTCACGTGGGGAAGGAACA...GTACTTTTGAAGCTTCGTATTTTTCTTGGTTTCACACTCAGCTACATGTGACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR TCA 90 bp CACTCAGCAAATGTGAGCAAACAAACACTAGAGACTTTAGTCTGCCAGGTCTCTCAACATCAAACATTATaGCATCGTAGCAAGGCCGTG +
Preference number: 4 (lower is better)
Translates to: HSANVSKQTLETLVCQVSQHQTL*HRSKAV
Trigger: CACGGCCTTGCTACGATGTCATAATGTTTGATGTTG...AGAGACCTGGCAGACTAAAGTCTCTAGTGTTTGTTTGCTCACATTTGCTGAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR TCA 90 bp GAGAAAAAGACAAATGGCTTAGGCTACAAGGTTTGGGTCACCAAGGAAAGCTGTCGTCTTGAGCATATCTaGCAAGACATACGTGTCATC +
Preference number: 4 (lower is better)
Translates to: EKKTNGLGYKVWVTKESCRLEHI*QDIRVI
Trigger: GATGACACGTATGTCTTGTCAGATATGCTCAAGACG...ACAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAGCCATTTGTCTTTTTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR TCA 90 bp GTAGCTGAGTGTGAAACCAAGAAAAATACGAAGCTTCAAAAGTACTGTGCGTTGCAACCCAAGTGGTACTaGAGAGGACAAGATGGGAAG +
Preference number: 4 (lower is better)
Translates to: VAECETKKNTKLQKYCALQPKWY*RGQDGK
Trigger: CTTCCCATCTTGTCCTCTTCAGTACCACTTGGGTTG...CAACGCACAGTACTTTTGAAGCTTCGTATTTTTCTTGGTTTCACACTCAGCTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR TCA 90 bp CTATTTATGGTCTTTTGGCATCTTGCTCTGCTATCTCACTTGAGATCACTCCTACAACCCAAGTGGTACTaGAGAGGACAAGATGGGAAG +
Preference number: 4 (lower is better)
Translates to: LFMVFWHLALLSHLRSLLQPKWY*RGQDGK
Trigger: CTTCCCATCTTGTCCTCTTCAGTACCACTTGGGTTG...TAGGAGTGATCTCAAGTGAGATAGCAGAGCAAGATGCCAAAAGACCATAAATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR TCA 90 bp AGGTCACATGTAGCTGAGTGTGAAACCAAGAAAAATACGAAGCTTCAAAAGTACGGATGTCTTGAGTTCTaGGGGGCTTGCACACACTTG +
Preference number: 4 (lower is better)
Translates to: RSHVAECETKKNTKLQKYGCLEF*GACTHL
Trigger: CAAGTGTGTGCAAGCCCCTCAGAACTCAAGACATCC...GTACTTTTGAAGCTTCGTATTTTTCTTGGTTTCACACTCAGCTACATGTGACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR TCA 90 bp CACTCAGCAAATGTGAGCAAACAAACACTAGAGACTTTAGTCTGCCAGGTCTCTAAAATTTGGATGTCTTaGGTTCTGAGGGGCTTGCAC +
Preference number: 4 (lower is better)
Translates to: HSANVSKQTLETLVCQVSKIWMS*VLRGLH
Trigger: GTGCAAGCCCCTCAGAACTCAAGACATCCAAATTTT...AGAGACCTGGCAGACTAAAGTCTCTAGTGTTTGTTTGCTCACATTTGCTGAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR TCA 90 bp AAAAGTACTGTGCGTTGTATTTCTTCATTCTCTGGCAGGCTGGGAGTCCAAGGTCTCTGCTATCTCACTTaGGATCACTCCTATAGAACT +
Preference number: 4 (lower is better)
Translates to: KSTVRCISSFSGRLGVQGLCYLT*DHSYRT
Trigger: AGTTCTATAGGAGTGATCTCAAGTGAGATAGCAGAG...ACCTTGGACTCCCAGCCTGCCAGAGAATGAAGAAATACAACGCACAGTACTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR TCA 90 bp AGAAACCTTACTCTATTTATGGTCTTTTGGCATCTTGCTCTGCTATCTCACTTGTCCAAACCCCAGGAATaGCCCTTACACGACAAACGC +
Preference number: 4 (lower is better)
Translates to: RNLTLFMVFWHLALLSHLSKPQE*PLHDKR
Trigger: GCGTTTGTCGTGTAAGGGTCATTCCTGGGGTTTGGA...CAAGTGAGATAGCAGAGCAAGATGCCAAAAGACCATAAATAGAGTAAGGTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000367737.9
CDS-3UTR TCA 90 bp GAAAAAGACAAATGGCTTAGGCTACAAGGTTTGGGTCACCAAGGAAAGCTGTCACCTTTTCCCTGGGCTTaGTATATTTATGTAGCACCC +
Preference number: 4 (lower is better)
Translates to: EKDKWLRLQGLGHQGKLSPFPWA*YIYVAP
Trigger: GGGTGCTACATAAATATATCAAGCCCAGGGAAAAGG...TGACAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAGCCATTTGTCTTTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000367737.9
CDS-3UTR GCA 90 bp GAGAAAAAGACAAATGGCTTAGGCTACAAGGTTTGGGTCACCAAGGAAAGCTGTTCAGGAAACTCCATCTaGGTCATGTCCATCTTCAAG +
Preference number: 4 (lower is better)
Translates to: EKKTNGLGYKVWVTKESCSGNSI*VMSIFK
Trigger: CTTGAAGATGGACATGACGCAGATGGAGTTTCCTGA...ACAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAGCCATTTGTCTTTTTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR GCA 90 bp AGAAACCTTACTCTATTTATGGTCTTTTGGCATCTTGCTCTGCTATCTCACTTGAACCTGGCTTCGGACTaGACCACATTCCTGTTGCTG +
Preference number: 4 (lower is better)
Translates to: RNLTLFMVFWHLALLSHLNLASD*TTFLLL
Trigger: CAGCAACAGGAATGTGGTGCAGTCCGAAGCCAGGTT...CAAGTGAGATAGCAGAGCAAGATGCCAAAAGACCATAAATAGAGTAAGGTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR GCA 90 bp AGAAACCTTACTCTATTTATGGTCTTTTGGCATCTTGCTCTGCTATCTCACTTGGCATCAGCAGGCCGCTaGTTCTTCCTGTCCTTTTTC +
Preference number: 4 (lower is better)
Translates to: RNLTLFMVFWHLALLSHLASAGR*FFLSFF
Trigger: GAAAAAGGACAGGAAGAAGCAGCGGCCTGCTGATGC...CAAGTGAGATAGCAGAGCAAGATGCCAAAAGACCATAAATAGAGTAAGGTTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR GCA 90 bp GCATCTTGCTCTGCTATCTCACTTGAGATCACTCCTATAGAACTAATAGAGGAATGCCACCACCCTTTATaGAGTCTGGCACATAGCTGT +
Preference number: 4 (lower is better)
Translates to: ASCSAISLEITPIELIEECHHPL*SLAHSC
Trigger: ACAGCTATGTGCCAGACTGCATAAAGGGTGGTGGCA...TTCCTCTATTAGTTCTATAGGAGTGATCTCAAGTGAGATAGCAGAGCAAGATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CCA 90 bp CTATTTATGGTCTTTTGGCATCTTGCTCTGCTATCTCACTTGAGATCACTCCTATCTGGGGCCGTCGGGTaGCATTACATTCCTTCATTT +
Preference number: 4 (lower is better)
Translates to: LFMVFWHLALLSHLRSLLSGAVG*HYIPSF
Trigger: AAATGAAGGAATGTAATGCCACCCGACGGCCCCAGA...TAGGAGTGATCTCAAGTGAGATAGCAGAGCAAGATGCCAAAAGACCATAAATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CCA 90 bp AGAAACCTTACTCTATTTATGGTCTTTTGGCATCTTGCTCTGCTATCTCACTTGTTCAAGAAGCTCATCTaGGGCCGTCGGGTGGCATTA +
Preference number: 4 (lower is better)
Translates to: RNLTLFMVFWHLALLSHLFKKLI*GRRVAL
Trigger: TAATGCCACCCGACGGCCCCAGATGAGCTTCTTGAA...CAAGTGAGATAGCAGAGCAAGATGCCAAAAGACCATAAATAGAGTAAGGTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CCA 90 bp AGAAACCTTACTCTATTTATGGTCTTTTGGCATCTTGCTCTGCTATCTCACTTGATGATTGTCCCGCGATaGTTTCACAGTGGGGCTGTC +
Preference number: 4 (lower is better)
Translates to: RNLTLFMVFWHLALLSHLMIVPR*FHSGAV
Trigger: GACAGCCCCACTGTGAAACCATCGCGGGACAATCAT...CAAGTGAGATAGCAGAGCAAGATGCCAAAAGACCATAAATAGAGTAAGGTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000362019.7
CDS-3UTR CCA 90 bp AAAAAGACAAATGGCTTAGGCTACAAGGTTTGGGTCACCAAGGAAAGCTGTCAAAGCTCAGCTTGGATGTaGTCCATGCTTTCATACTGC +
Preference number: 4 (lower is better)
Translates to: KKTNGLGYKVWVTKESCQSSAWM*SMLSYC
Trigger: GCAGTATGAAAGCATGGACCACATCCAAGCTGAGCT...TTGACAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAGCCATTTGTCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CCA 90 bp AGGTCACATGTAGCTGAGTGTGAAACCAAGAAAAATACGAAGCTTCAAAAGTACGCCGACAGCTCAGCTTaGATGTGGTCCATGCTTTCA +
Preference number: 4 (lower is better)
Translates to: RSHVAECETKKNTKLQKYADSSA*MWSMLS
Trigger: TGAAAGCATGGACCACATCCAAGCTGAGCTGTCGGC...GTACTTTTGAAGCTTCGTATTTTTCTTGGTTTCACACTCAGCTACATGTGACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CCA 90 bp ATTTATGGTCTTTTGGCATCTTGCTCTGCTATCTCACTTGAGATCACTCCTATATGGCCACTTCCAACATaGAGGGATCGATCTCCACAG +
Preference number: 4 (lower is better)
Translates to: IYGLLASCSAISLEITPIWPLPT*RDRSPQ
Trigger: CTGTGGAGATCGATCCCTCCATGTTGGAAGTGGCCA...TATAGGAGTGATCTCAAGTGAGATAGCAGAGCAAGATGCCAAAAGACCATAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CCA 90 bp CTATTTATGGTCTTTTGGCATCTTGCTCTGCTATCTCACTTGAGATCACTCCTATTCATTCGGTCACTCTaGGAGAAGCCAAACCACTGG +
Preference number: 4 (lower is better)
Translates to: LFMVFWHLALLSHLRSLLFIRSL*EKPNHW
Trigger: CCAGTGGTTTGGCTTCTCCCAGAGTGACCGAATGAA...TAGGAGTGATCTCAAGTGAGATAGCAGAGCAAGATGCCAAAAGACCATAAATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CCA 90 bp GCATCTTGCTCTGCTATCTCACTTGAGATCACTCCTATAGAACTAATAGAGGAAAGGCCATCTGCAATGTaGACCTTCATTCGGTCACTC +
Preference number: 4 (lower is better)
Translates to: ASCSAISLEITPIELIEERPSAM*TFIRSL
Trigger: GAGTGACCGAATGAAGGTCCACATTGCAGATGGCCT...TTCCTCTATTAGTTCTATAGGAGTGATCTCAAGTGAGATAGCAGAGCAAGATGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CCA 90 bp AGAAACCTTACTCTATTTATGGTCTTTTGGCATCTTGCTCTGCTATCTCACTTGCATTCTCTGGCAGGCTaGGAGTCCAAGGTCAGTCTA +
Preference number: 4 (lower is better)
Translates to: RNLTLFMVFWHLALLSHLHSLAG*ESKVSL
Trigger: TAGACTGACCTTGGACTCCCAGCCTGCCAGAGAATG...CAAGTGAGATAGCAGAGCAAGATGCCAAAAGACCATAAATAGAGTAAGGTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CCA 90 bp ACAAATGGCTTAGGCTACAAGGTTTGGGTCACCAAGGAAAGCTGTCAAATAATGCTCCACTCAAGGACGTaGTGTAGGAAGCAAAGACAA +
Preference number: 4 (lower is better)
Translates to: TNGLGYKVWVTKESCQIMLHSRT*CRKQRQ
Trigger: TTGTCTTTGCTTCCTACACCACGTCCTTGAGTGGAG...CATTATTTGACAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAGCCATTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CCA 90 bp AAAAAGACAAATGGCTTAGGCTACAAGGTTTGGGTCACCAAGGAAAGCTGTCAACTCCACTCAAGGACGTaGTGTAGGAAGCAAAGACAA +
Preference number: 4 (lower is better)
Translates to: KKTNGLGYKVWVTKESCQLHSRT*CRKQRQ
Trigger: TTGTCTTTGCTTCCTACACCACGTCCTTGAGTGGAG...TTGACAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAGCCATTTGTCTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CCA 90 bp GGACGTGGTGTAGGAAGCAAAGACAAACCAACCCAAGTGGTACTGAAGAGGACACTATTTATGGTCTTTTaGCATCTTGCTCTGCTATCT +
Preference number: 4 (lower is better)
Translates to: GRGVGSKDKPTQVVLKRTLFMVF*HLALLS
Trigger: AGATAGCAGAGCAAGATGCCAAAAGACCATAAATAG...TGTCCTCTTCAGTACCACTTGGGTTGGTTTGTCTTTGCTTCCTACACCACGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CCA 90 bp GGACGTGGTGTAGGAAGCAAAGACAAACCAACCCAAGTGGTACTGAAGAGGACACAGATTCCTAAAAATTaGAACCATTTCAGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: GRGVGSKDKPTQVVLKRTQIPKN*NHFSSS
Trigger: ACTGCTGCTGAAATGGTTCCAATTTTTAGGAATCTG...TGTCCTCTTCAGTACCACTTGGGTTGGTTTGTCTTTGCTTCCTACACCACGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CCA 90 bp GTAGCTGAGTGTGAAACCAAGAAAAATACGAAGCTTCAAAAGTACTGTGCGTTGTCCGGGACACTGCAGTaGGAATTCTTTCCACGGAAA +
Preference number: 4 (lower is better)
Translates to: VAECETKKNTKLQKYCALSGTLQ*EFFPRK
Trigger: TTTCCGTGGAAAGAATTCCCACTGCAGTGTCCCGGA...CAACGCACAGTACTTTTGAAGCTTCGTATTTTTCTTGGTTTCACACTCAGCTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000367737.9
CDS-3UTR CCA 90 bp CTATTTATGGTCTTTTGGCATCTTGCTCTGCTATCTCACTTGAGATCACTCCTATCCGGGACACTGCAGTaGGAATTCTTTCCACGGAAA +
Preference number: 4 (lower is better)
Translates to: LFMVFWHLALLSHLRSLLSGTLQ*EFFPRK
Trigger: TTTCCGTGGAAAGAATTCCCACTGCAGTGTCCCGGA...TAGGAGTGATCTCAAGTGAGATAGCAGAGCAAGATGCCAAAAGACCATAAATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000367737.9
CDS-3UTR TCA 90 bp GAGAAAAAGACAAATGGCTTAGGCTACAAGGTTTGGGTCACCAAGGAAAGCTGTATGAAAATCGCAAAATaGTTGTCCCGCGATGGTTTC +
Preference number: 4 (lower is better)
Translates to: EKKTNGLGYKVWVTKESCMKIAK*LSRDGF
Trigger: GAAACCATCGCGGGACAATCATTTTGCGATTTTCAT...ACAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAGCCATTTGTCTTTTTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000362019.7
CDS-3UTR TCA 90 bp CTATTTATGGTCTTTTGGCATCTTGCTCTGCTATCTCACTTGAGATCACTCCTATTCTTCTGGGCTTTGTaGGACACATCCTTCAGCAAC +
Preference number: 4 (lower is better)
Translates to: LFMVFWHLALLSHLRSLLFFWAL*DTSFSN
Trigger: GTTGCTGAAGGATGTGTCTCACAAAGCCCAGAAGAA...TAGGAGTGATCTCAAGTGAGATAGCAGAGCAAGATGCCAAAAGACCATAAATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR TCA 90 bp AGCAAACAAACACTAGAGACTTTAGTCTGCCAGGTCTCTAACATGCAAAGCCATAAAATTTGGATGTCTTaGGTTCTGAGGGGCTTGCAC +
Preference number: 4 (lower is better)
Translates to: SKQTLETLVCQVSNMQSHKIWMS*VLRGLH
Trigger: GTGCAAGCCCCTCAGAACTCAAGACATCCAAATTTT...ATGGCTTTGCATGTTAGAGACCTGGCAGACTAAAGTCTCTAGTGTTTGTTTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR TCA 90 bp CACTCAGCAAATGTGAGCAAACAAACACTAGAGACTTTAGTCTGCCAGGTCTCTCTCTGCTATCTCACTTaGGATCACTCCTATAGAACT +
Preference number: 4 (lower is better)
Translates to: HSANVSKQTLETLVCQVSLCYLT*DHSYRT
Trigger: AGTTCTATAGGAGTGATCTCAAGTGAGATAGCAGAG...AGAGACCTGGCAGACTAAAGTCTCTAGTGTTTGTTTGCTCACATTTGCTGAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR GCA 90 bp CTATTTATGGTCTTTTGGCATCTTGCTCTGCTATCTCACTTGAGATCACTCCTACTTGGATGTGGTCCATaGTTTCATACTGCTGACCTC +
Preference number: 4 (lower is better)
Translates to: LFMVFWHLALLSHLRSLLLGCGP*FHTADL
Trigger: GAGGTCAGCAGTATGAAAGCATGGACCACATCCAAG...TAGGAGTGATCTCAAGTGAGATAGCAGAGCAAGATGCCAAAAGACCATAAATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR GCA 90 bp GCATCTTGCTCTGCTATCTCACTTGAGATCACTCCTATAGAACTAATAGAGGAAATAGTCCAGGCCATCTaGAATGTGGACCTTCATTCG +
Preference number: 4 (lower is better)
Translates to: ASCSAISLEITPIELIEEIVQAI*NVDLHS
Trigger: CGAATGAAGGTCCACATTGCAGATGGCCTGGACTAT...TTCCTCTATTAGTTCTATAGGAGTGATCTCAAGTGAGATAGCAGAGCAAGATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR GCA 90 bp GTAGCTGAGTGTGAAACCAAGAAAAATACGAAGCTTCAAAAGTACTGTGCGTTGATAGTCCAGGCCATCTaGAATGTGGACCTTCATTCG +
Preference number: 4 (lower is better)
Translates to: VAECETKKNTKLQKYCALIVQAI*NVDLHS
Trigger: CGAATGAAGGTCCACATTGCAGATGGCCTGGACTAT...CAACGCACAGTACTTTTGAAGCTTCGTATTTTTCTTGGTTTCACACTCAGCTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR GCA 90 bp AGGTCACATGTAGCTGAGTGTGAAACCAAGAAAAATACGAAGCTTCAAAAGTACAGATTGCTCCACAAATaGTGGGGGCGGACAACTCAT +
Preference number: 4 (lower is better)
Translates to: RSHVAECETKKNTKLQKYRLLHK*WGRTTH
Trigger: ATGAGTTGTCCGCCCCCAGCATTTGTGGAGCAATCT...GTACTTTTGAAGCTTCGTATTTTTCTTGGTTTCACACTCAGCTACATGTGACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR GCA 90 bp ACAAATGGCTTAGGCTACAAGGTTTGGGTCACCAAGGAAAGCTGTCAAATAATGTTCTGTAGAAAAGATTaGTCCACAAATGCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: TNGLGYKVWVTKESCQIMFCRKD*STNAGG
Trigger: GCCCCCAGCATTTGTGGAGCAATCTTTTCTACAGAA...CATTATTTGACAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAGCCATTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR GCA 90 bp AGCAAACAAACACTAGAGACTTTAGTCTGCCAGGTCTCTAACATGCAAAGCCATGGTCTTTTGGCATCTTaGTCTGCTATCTCACTTGAG +
Preference number: 4 (lower is better)
Translates to: SKQTLETLVCQVSNMQSHGLLAS*SAISLE
Trigger: CTCAAGTGAGATAGCAGAGCAAGATGCCAAAAGACC...ATGGCTTTGCATGTTAGAGACCTGGCAGACTAAAGTCTCTAGTGTTTGTTTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CCA 90 bp GTAGCTGAGTGTGAAACCAAGAAAAATACGAAGCTTCAAAAGTACTGTGCGTTGAGCTCAGCTTGGATGTaGTCCATGCTTTCATACTGC +
Preference number: 4 (lower is better)
Translates to: VAECETKKNTKLQKYCALSSAWM*SMLSYC
Trigger: GCAGTATGAAAGCATGGACCACATCCAAGCTGAGCT...CAACGCACAGTACTTTTGAAGCTTCGTATTTTTCTTGGTTTCACACTCAGCTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CCA 90 bp AAAAAGACAAATGGCTTAGGCTACAAGGTTTGGGTCACCAAGGAAAGCTGTCAAACTCATTCCCAGTGTTaGGTCCTTACTGTCAACATC +
Preference number: 4 (lower is better)
Translates to: KKTNGLGYKVWVTKESCQTHSQC*VLTVNI
Trigger: GATGTTGACAGTAAGGACCCAACACTGGGAATGAGT...TTGACAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAGCCATTTGTCTTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR TCA 90 bp CAAAAGCAAACCAGTATAAGTAGAGACGCAATAAAATTTGGATGTCTTGAGTTCTGCTCAGGGTGCAGCTaGCAGAACAGGATCTCATTC +
Preference number: 4 (lower is better)
Translates to: QKQTSISRDAIKFGCLEFCSGCS*QNRISF
Trigger: GAATGAGATCCTGTTCTGTCAGCTGCACCCTGAGCA...GAACTCAAGACATCCAAATTTTATTGCGTCTCTACTTATACTGGTTTGCTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR TCA 90 bp GTAGCTGAGTGTGAAACCAAGAAAAATACGAAGCTTCAAAAGTACTGTGCGTTGCGTCTTGAGCATATCTaGCAAGACATACGTGTCATC +
Preference number: 4 (lower is better)
Translates to: VAECETKKNTKLQKYCALRLEHI*QDIRVI
Trigger: GATGACACGTATGTCTTGTCAGATATGCTCAAGACG...CAACGCACAGTACTTTTGAAGCTTCGTATTTTTCTTGGTTTCACACTCAGCTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR TCA 90 bp CACTCAGCAAATGTGAGCAAACAAACACTAGAGACTTTAGTCTGCCAGGTCTCTCAATTTTCACCGTCTTaGGCATATCTGACAAGACAT +
Preference number: 4 (lower is better)
Translates to: HSANVSKQTLETLVCQVSQFSPS*AYLTRH
Trigger: ATGTCTTGTCAGATATGCTCAAGACGGTGAAAATTG...AGAGACCTGGCAGACTAAAGTCTCTAGTGTTTGTTTGCTCACATTTGCTGAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR TCA 90 bp CAAAAGCAAACCAGTATAAGTAGAGACGCAATAAAATTTGGATGTCTTGAGTTCGGATGTCTTGAGTTCTaGGGGGCTTGCACACACTTG +
Preference number: 4 (lower is better)
Translates to: QKQTSISRDAIKFGCLEFGCLEF*GACTHL
Trigger: CAAGTGTGTGCAAGCCCCTCAGAACTCAAGACATCC...GAACTCAAGACATCCAAATTTTATTGCGTCTCTACTTATACTGGTTTGCTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR TCA 90 bp CTATTTATGGTCTTTTGGCATCTTGCTCTGCTATCTCACTTGAGATCACTCCTAAAAATTTGGATGTCTTaGGTTCTGAGGGGCTTGCAC +
Preference number: 4 (lower is better)
Translates to: LFMVFWHLALLSHLRSLLKIWMS*VLRGLH
Trigger: GTGCAAGCCCCTCAGAACTCAAGACATCCAAATTTT...TAGGAGTGATCTCAAGTGAGATAGCAGAGCAAGATGCCAAAAGACCATAAATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR TCA 90 bp AGCAAACAAACACTAGAGACTTTAGTCTGCCAGGTCTCTAACATGCAAAGCCATATACACTCCCTCCACTaGGAAAAAGACAAATGGCTT +
Preference number: 4 (lower is better)
Translates to: SKQTLETLVCQVSNMQSHIHSLH*EKDKWL
Trigger: AAGCCATTTGTCTTTTTCTCAGTGGAGGGAGTGTAT...ATGGCTTTGCATGTTAGAGACCTGGCAGACTAAAGTCTCTAGTGTTTGTTTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR TCA 90 bp CTATTTATGGTCTTTTGGCATCTTGCTCTGCTATCTCACTTGAGATCACTCCTAGAAAAACAGCCACATTaGTTTGTTCCCCCACTCCAA +
Preference number: 4 (lower is better)
Translates to: LFMVFWHLALLSHLRSLLEKQPH*FVPPLQ
Trigger: TTGGAGTGGGGGAACAAATCAATGTGGCTGTTTTTC...TAGGAGTGATCTCAAGTGAGATAGCAGAGCAAGATGCCAAAAGACCATAAATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000367737.9
CDS-3UTR GCA 90 bp GAGAAAAAGACAAATGGCTTAGGCTACAAGGTTTGGGTCACCAAGGAAAGCTGTTCTCCACAGCATCAATaGAGGACTTTGGAAAATGAT +
Preference number: 4 (lower is better)
Translates to: EKKTNGLGYKVWVTKESCSPQHQ*RTLEND
Trigger: ATCATTTTCCAAAGTCCTGCATTGATGCTGTGGAGA...ACAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAGCCATTTGTCTTTTTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR GCA 90 bp AGAAACCTTACTCTATTTATGGTCTTTTGGCATCTTGCTCTGCTATCTCACTTGATAGTCCAGGCCATCTaGAATGTGGACCTTCATTCG +
Preference number: 4 (lower is better)
Translates to: RNLTLFMVFWHLALLSHLIVQAI*NVDLHS
Trigger: CGAATGAAGGTCCACATTGCAGATGGCCTGGACTAT...CAAGTGAGATAGCAGAGCAAGATGCCAAAAGACCATAAATAGAGTAAGGTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR GCA 90 bp CTATTTATGGTCTTTTGGCATCTTGCTCTGCTATCTCACTTGAGATCACTCCTATTCTGTAGAAAAGATTaGTCCACAAATGCTGGGGGC +
Preference number: 4 (lower is better)
Translates to: LFMVFWHLALLSHLRSLLFCRKD*STNAGG
Trigger: GCCCCCAGCATTTGTGGAGCAATCTTTTCTACAGAA...TAGGAGTGATCTCAAGTGAGATAGCAGAGCAAGATGCCAAAAGACCATAAATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR GCA 90 bp ACAAATGGCTTAGGCTACAAGGTTTGGGTCACCAAGGAAAGCTGTCAAATAATGCTAGAGACTTTAGTCTaGCAGGTCTCTAACATGCAA +
Preference number: 4 (lower is better)
Translates to: TNGLGYKVWVTKESCQIMLETLV*QVSNMQ
Trigger: TTGCATGTTAGAGACCTGGCAGACTAAAGTCTCTAG...CATTATTTGACAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAGCCATTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CCA 90 bp CAAAAGCAAACCAGTATAAGTAGAGACGCAATAAAATTTGGATGTCTTGAGTTCGAGAAGCCAAACCACTaGGTGGCCACTTCCAACATG +
Preference number: 4 (lower is better)
Translates to: QKQTSISRDAIKFGCLEFEKPNH*VATSNM
Trigger: CATGTTGGAAGTGGCCACCCAGTGGTTTGGCTTCTC...GAACTCAAGACATCCAAATTTTATTGCGTCTCTACTTATACTGGTTTGCTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CCA 90 bp CAAAAGCAAACCAGTATAAGTAGAGACGCAATAAAATTTGGATGTCTTGAGTTCTTGCTCCACAAATGCTaGGGGCGGACAACTCATTCC +
Preference number: 4 (lower is better)
Translates to: QKQTSISRDAIKFGCLEFLLHKC*GRTTHS
Trigger: GGAATGAGTTGTCCGCCCCCAGCATTTGTGGAGCAA...GAACTCAAGACATCCAAATTTTATTGCGTCTCTACTTATACTGGTTTGCTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CCA 90 bp CAAAAGCAAACCAGTATAAGTAGAGACGCAATAAAATTTGGATGTCTTGAGTTCGCAACCTCACCAAGCTaGAGGTCACATGTAGCTGAG +
Preference number: 4 (lower is better)
Translates to: QKQTSISRDAIKFGCLEFATSPS*RSHVAE
Trigger: CTCAGCTACATGTGACCTCCAGCTTGGTGAGGTTGC...GAACTCAAGACATCCAAATTTTATTGCGTCTCTACTTATACTGGTTTGCTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR TCA 90 bp ATTTATGGTCTTTTGGCATCTTGCTCTGCTATCTCACTTGAGATCACTCCTATACAACATCAAACATTATaGCATCGTAGCAAGGCCGTG +
Preference number: 4 (lower is better)
Translates to: IYGLLASCSAISLEITPIQHQTL*HRSKAV
Trigger: CACGGCCTTGCTACGATGTCATAATGTTTGATGTTG...TATAGGAGTGATCTCAAGTGAGATAGCAGAGCAAGATGCCAAAAGACCATAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR TCA 90 bp AGCAAACAAACACTAGAGACTTTAGTCTGCCAGGTCTCTAACATGCAAAGCCATCAATTTTCACCGTCTTaGGCATATCTGACAAGACAT +
Preference number: 4 (lower is better)
Translates to: SKQTLETLVCQVSNMQSHQFSPS*AYLTRH
Trigger: ATGTCTTGTCAGATATGCTCAAGACGGTGAAAATTG...ATGGCTTTGCATGTTAGAGACCTGGCAGACTAAAGTCTCTAGTGTTTGTTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR TCA 90 bp CTATTTATGGTCTTTTGGCATCTTGCTCTGCTATCTCACTTGAGATCACTCCTAATACACTCCCTCCACTaGGAAAAAGACAAATGGCTT +
Preference number: 4 (lower is better)
Translates to: LFMVFWHLALLSHLRSLLIHSLH*EKDKWL
Trigger: AAGCCATTTGTCTTTTTCTCAGTGGAGGGAGTGTAT...TAGGAGTGATCTCAAGTGAGATAGCAGAGCAAGATGCCAAAAGACCATAAATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR TCA 90 bp GAAAAAGACAAATGGCTTAGGCTACAAGGTTTGGGTCACCAAGGAAAGCTGTCAATGTTTCCAGCCAAGTaGGATTTGGGTTTAGATATA +
Preference number: 4 (lower is better)
Translates to: EKDKWLRLQGLGHQGKLSMFPAK*DLGLDI
Trigger: TATATCTAAACCCAAATCTCACTTGGCTGGAAACAT...TGACAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAGCCATTTGTCTTTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR TCA 90 bp ATTTATGGTCTTTTGGCATCTTGCTCTGCTATCTCACTTGAGATCACTCCTATACCTTTTCCCTGGGCTTaGTATATTTATGTAGCACCC +
Preference number: 4 (lower is better)
Translates to: IYGLLASCSAISLEITPIPFPWA*YIYVAP
Trigger: GGGTGCTACATAAATATATCAAGCCCAGGGAAAAGG...TATAGGAGTGATCTCAAGTGAGATAGCAGAGCAAGATGCCAAAAGACCATAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000367737.9
CDS-3UTR GCA 90 bp ATTTATGGTCTTTTGGCATCTTGCTCTGCTATCTCACTTGAGATCACTCCTATACCCACATCATACAGTTaGTCACTCAGTTCTGAGTTG +
Preference number: 4 (lower is better)
Translates to: IYGLLASCSAISLEITPIPTSYS*SLSSEL
Trigger: CAACTCAGAACTGAGTGAGCAACTGTATGATGTGGG...TATAGGAGTGATCTCAAGTGAGATAGCAGAGCAAGATGCCAAAAGACCATAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR GCA 90 bp AGGTCACATGTAGCTGAGTGTGAAACCAAGAAAAATACGAAGCTTCAAAAGTACTCAGGAAACTCCATCTaGGTCATGTCCATCTTCAAG +
Preference number: 4 (lower is better)
Translates to: RSHVAECETKKNTKLQKYSGNSI*VMSIFK
Trigger: CTTGAAGATGGACATGACGCAGATGGAGTTTCCTGA...GTACTTTTGAAGCTTCGTATTTTTCTTGGTTTCACACTCAGCTACATGTGACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR GCA 90 bp AGCAAACAAACACTAGAGACTTTAGTCTGCCAGGTCTCTAACATGCAAAGCCATAAACATTTTCACTTCTaGCACCACCCTTTATGCAGT +
Preference number: 4 (lower is better)
Translates to: SKQTLETLVCQVSNMQSHKHFHF*HHPLCS
Trigger: ACTGCATAAAGGGTGGTGGCAGAAGTGAAAATGTTT...ATGGCTTTGCATGTTAGAGACCTGGCAGACTAAAGTCTCTAGTGTTTGTTTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR GCA 90 bp AAAAGTACTGTGCGTTGTATTTCTTCATTCTCTGGCAGGCTGGGAGTCCAAGGTAACCACTTAGAAGAATaGCTGGAACACATTAACTTT +
Preference number: 4 (lower is better)
Translates to: KSTVRCISSFSGRLGVQGNHLEE*LEHINF
Trigger: AAAGTTAATGTGTTCCAGGCATTCTTCTAAGTGGTT...ACCTTGGACTCCCAGCCTGCCAGAGAATGAAGAAATACAACGCACAGTACTTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CCA 90 bp AGGTCACATGTAGCTGAGTGTGAAACCAAGAAAAATACGAAGCTTCAAAAGTACACTCATTCCCAGTGTTaGGTCCTTACTGTCAACATC +
Preference number: 4 (lower is better)
Translates to: RSHVAECETKKNTKLQKYTHSQC*VLTVNI
Trigger: GATGTTGACAGTAAGGACCCAACACTGGGAATGAGT...GTACTTTTGAAGCTTCGTATTTTTCTTGGTTTCACACTCAGCTACATGTGACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CCA 90 bp GAAAAAGACAAATGGCTTAGGCTACAAGGTTTGGGTCACCAAGGAAAGCTGTCACTATTTATGGTCTTTTaGCATCTTGCTCTGCTATCT +
Preference number: 4 (lower is better)
Translates to: EKDKWLRLQGLGHQGKLSLFMVF*HLALLS
Trigger: AGATAGCAGAGCAAGATGCCAAAAGACCATAAATAG...TGACAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAGCCATTTGTCTTTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CCA 90 bp GAAAAAGACAAATGGCTTAGGCTACAAGGTTTGGGTCACCAAGGAAAGCTGTCAACCTTACTCTATTTATaGTCTTTTGGCATCTTGCTC +
Preference number: 4 (lower is better)
Translates to: EKDKWLRLQGLGHQGKLSTLLYL*SFGILL
Trigger: GAGCAAGATGCCAAAAGACCATAAATAGAGTAAGGT...TGACAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAGCCATTTGTCTTTTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR TCA 90 bp AAAAAGACAAATGGCTTAGGCTACAAGGTTTGGGTCACCAAGGAAAGCTGTCAAATGTTTCCAGCCAAGTaGGATTTGGGTTTAGATATA +
Preference number: 4 (lower is better)
Translates to: KKTNGLGYKVWVTKESCQMFPAK*DLGLDI
Trigger: TATATCTAAACCCAAATCTCACTTGGCTGGAAACAT...TTGACAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAGCCATTTGTCTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR GCA 90 bp ATTTATGGTCTTTTGGCATCTTGCTCTGCTATCTCACTTGAGATCACTCCTATACTAGAGACTTTAGTCTaGCAGGTCTCTAACATGCAA +
Preference number: 4 (lower is better)
Translates to: IYGLLASCSAISLEITPILETLV*QVSNMQ
Trigger: TTGCATGTTAGAGACCTGGCAGACTAAAGTCTCTAG...TATAGGAGTGATCTCAAGTGAGATAGCAGAGCAAGATGCCAAAAGACCATAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR GCA 90 bp GTAGCTGAGTGTGAAACCAAGAAAAATACGAAGCTTCAAAAGTACTGTGCGTTGAAACATTTTCACTTCTaGCACCACCCTTTATGCAGT +
Preference number: 4 (lower is better)
Translates to: VAECETKKNTKLQKYCALKHFHF*HHPLCS
Trigger: ACTGCATAAAGGGTGGTGGCAGAAGTGAAAATGTTT...CAACGCACAGTACTTTTGAAGCTTCGTATTTTTCTTGGTTTCACACTCAGCTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR TCA 90 bp CAAAAGCAAACCAGTATAAGTAGAGACGCAATAAAATTTGGATGTCTTGAGTTCCGTCTTGAGCATATCTaGCAAGACATACGTGTCATC +
Preference number: 4 (lower is better)
Translates to: QKQTSISRDAIKFGCLEFRLEHI*QDIRVI
Trigger: GATGACACGTATGTCTTGTCAGATATGCTCAAGACG...GAACTCAAGACATCCAAATTTTATTGCGTCTCTACTTATACTGGTTTGCTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR TCA 90 bp ATTTATGGTCTTTTGGCATCTTGCTCTGCTATCTCACTTGAGATCACTCCTATACAATTTTCACCGTCTTaGGCATATCTGACAAGACAT +
Preference number: 4 (lower is better)
Translates to: IYGLLASCSAISLEITPIQFSPS*AYLTRH
Trigger: ATGTCTTGTCAGATATGCTCAAGACGGTGAAAATTG...TATAGGAGTGATCTCAAGTGAGATAGCAGAGCAAGATGCCAAAAGACCATAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR TCA 90 bp CTATTTATGGTCTTTTGGCATCTTGCTCTGCTATCTCACTTGAGATCACTCCTAATGTTTCCAGCCAAGTaGGATTTGGGTTTAGATATA +
Preference number: 4 (lower is better)
Translates to: LFMVFWHLALLSHLRSLLMFPAK*DLGLDI
Trigger: TATATCTAAACCCAAATCTCACTTGGCTGGAAACAT...TAGGAGTGATCTCAAGTGAGATAGCAGAGCAAGATGCCAAAAGACCATAAATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR GCA 90 bp CAAAAGCAAACCAGTATAAGTAGAGACGCAATAAAATTTGGATGTCTTGAGTTCCCCACATCATACAGTTaGTCACTCAGTTCTGAGTTG +
Preference number: 4 (lower is better)
Translates to: QKQTSISRDAIKFGCLEFPTSYS*SLSSEL
Trigger: CAACTCAGAACTGAGTGAGCAACTGTATGATGTGGG...GAACTCAAGACATCCAAATTTTATTGCGTCTCTACTTATACTGGTTTGCTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR GCA 90 bp AGGTCACATGTAGCTGAGTGTGAAACCAAGAAAAATACGAAGCTTCAAAAGTACTCTCCACAGCATCAATaGAGGACTTTGGAAAATGAT +
Preference number: 4 (lower is better)
Translates to: RSHVAECETKKNTKLQKYSPQHQ*RTLEND
Trigger: ATCATTTTCCAAAGTCCTGCATTGATGCTGTGGAGA...GTACTTTTGAAGCTTCGTATTTTTCTTGGTTTCACACTCAGCTACATGTGACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR GCA 90 bp AGAAACCTTACTCTATTTATGGTCTTTTGGCATCTTGCTCTGCTATCTCACTTGTCTCCACAGCATCAATaGAGGACTTTGGAAAATGAT +
Preference number: 4 (lower is better)
Translates to: RNLTLFMVFWHLALLSHLSPQHQ*RTLEND
Trigger: ATCATTTTCCAAAGTCCTGCATTGATGCTGTGGAGA...CAAGTGAGATAGCAGAGCAAGATGCCAAAAGACCATAAATAGAGTAAGGTTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR GCA 90 bp AGCAAACAAACACTAGAGACTTTAGTCTGCCAGGTCTCTAACATGCAAAGCCATAACCACTTAGAAGAATaGCTGGAACACATTAACTTT +
Preference number: 4 (lower is better)
Translates to: SKQTLETLVCQVSNMQSHNHLEE*LEHINF
Trigger: AAAGTTAATGTGTTCCAGGCATTCTTCTAAGTGGTT...ATGGCTTTGCATGTTAGAGACCTGGCAGACTAAAGTCTCTAGTGTTTGTTTGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CCA 90 bp CTATTTATGGTCTTTTGGCATCTTGCTCTGCTATCTCACTTGAGATCACTCCTAACCTTACTCTATTTATaGTCTTTTGGCATCTTGCTC +
Preference number: 4 (lower is better)
Translates to: LFMVFWHLALLSHLRSLLTLLYL*SFGILL
Trigger: GAGCAAGATGCCAAAAGACCATAAATAGAGTAAGGT...TAGGAGTGATCTCAAGTGAGATAGCAGAGCAAGATGCCAAAAGACCATAAATAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR TCA 90 bp CAAAAGCAAACCAGTATAAGTAGAGACGCAATAAAATTTGGATGTCTTGAGTTCATGAAAATCGCAAAATaGTTGTCCCGCGATGGTTTC +
Preference number: 4 (lower is better)
Translates to: QKQTSISRDAIKFGCLEFMKIAK*LSRDGF
Trigger: GAAACCATCGCGGGACAATCATTTTGCGATTTTCAT...GAACTCAAGACATCCAAATTTTATTGCGTCTCTACTTATACTGGTTTGCTTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000362019.7
CDS-3UTR CCA 90 bp AGAAACCTTACTCTATTTATGGTCTTTTGGCATCTTGCTCTGCTATCTCACTTGCAGATTCCTAAAAATTaGAACCATTTCAGCAGCAGT +
Preference number: 4 (lower is better)
Translates to: RNLTLFMVFWHLALLSHLQIPKN*NHFSSS
Trigger: ACTGCTGCTGAAATGGTTCCAATTTTTAGGAATCTG...CAAGTGAGATAGCAGAGCAAGATGCCAAAAGACCATAAATAGAGTAAGGTTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR GCA 90 bp CAAAAGCAAACCAGTATAAGTAGAGACGCAATAAAATTTGGATGTCTTGAGTTCAAACATTTTCACTTCTaGCACCACCCTTTATGCAGT +
Preference number: 4 (lower is better)
Translates to: QKQTSISRDAIKFGCLEFKHFHF*HHPLCS
Trigger: ACTGCATAAAGGGTGGTGGCAGAAGTGAAAATGTTT...GAACTCAAGACATCCAAATTTTATTGCGTCTCTACTTATACTGGTTTGCTTTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
3UTR CAA 72 bp GTTTCCAGCCAAGTGAGATTTGGGTTTAGATATAGTTaGGGCTTAAGTATCCTTTATCTCAGATTAAATGAG +
Preference number: 4 (lower is better)
Translates to: VSSQVRFGFRYS*GLSILYLRLNE
Trigger: CTCATTTAATCTGAGATAAAGGATACTTAAGCCCAAACTATATCTAAACCCAAATCTCACTTGGCTGGAAAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS GCA 90 bp CCCAGCCTGGCCTTGCGGCGCAGCTGGCTGCACAGCCAGGCATACTaGTGTCGCTCCTGCACCGCCTCGGCCAGCCGCTCGGCACTCTCC +
Preference number: 5 (lower is better)
Translates to: PSLALRRSWLHSQAY*CRSCTASASRSALS
Trigger: GGAGAGTGCCGAGCGGCTGGCCGAGGCGGTGCAGGAGCGACAGCAGTATGCCTGGCTGTGCAGCCAGCTGCGCCGCAAGGCCAGGCTGGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000362019.7
CDS GCA 90 bp TTGCGGCGCAGCTGGCTGCACAGCCAGGCATACTGCTGTCGCTCCTaGACCGCCTCGGCCAGCCGCTCGGCACTCTCCAGCCGCACAGGC +
Preference number: 5 (lower is better)
Translates to: LRRSWLHSQAYCCRS*TASASRSALSSRTG
Trigger: GCCTGTGCGGCTGGAGAGTGCCGAGCGGCTGGCCGAGGCGGTGCAGGAGCGACAGCAGTATGCCTGGCTGTGCAGCCAGCTGCGCCGCAA
71% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000362019.7
CDS GCA 90 bp GCACCGCCTCGGCCAGCCGCTCGGCACTCTCCAGCCGCACAGGCTTaGGCTGCTCCTGAGCACACAGCTCAAAGATCTGAAGGGCAGAGC +
Preference number: 5 (lower is better)
Translates to: APPRPAARHSPAAQA*AAPEHTAQRSEGQS
Trigger: GCTCTGCCCTTCAGATCTTTGAGCTGTGTGCTCAGGAGCAGCGCAAGCCTGTGCGGCTGGAGAGTGCCGAGCGGCTGGCCGAGGCGGTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000362019.7
CDS TCA 90 bp GCCACACCCAATCACCAGCACACGACAAACGCACGCATGGACCACTaGATCTCACACACGCTTGCCCCCTCCTCCGCGCCTGCTGTTCCT +
Preference number: 5 (lower is better)
Translates to: ATPNHQHTTNARMDH*ISHTLAPSSAPAVP
Trigger: AGGAACAGCAGGCGCGGAGGAGGGGGCAAGCGTGTGTGAGATTCAGTGGTCCATGCGTGCGTTTGTCGTGTGCTGGTGATTGGGTGTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000362019.7
CDS TCA 90 bp ACGGAGCCAAACTCCCTGGAAACGACAAACGCACGCATGGACCACTaGATCTCACACACGCTTGCCCCCTCCTCCGCGCCTGCTGTTCCT +
Preference number: 5 (lower is better)
Translates to: TEPNSLETTNARMDH*ISHTLAPSSAPAVP
Trigger: AGGAACAGCAGGCGCGGAGGAGGGGGCAAGCGTGTGTGAGATTCAGTGGTCCATGCGTGCGTTTGTCGTTTCCAGGGAGTTTGGCTCCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485629.1
CDS CCA 90 bp CCACTCCAAACCCCAGGAATGACCCTTACACGACAAACGCACGCATaGACCACTGAATCTCACACACGCTTGCCCCCTCCTCCGCGCCTG +
Preference number: 5 (lower is better)
Translates to: PLQTPGMTLTRQTHA*TTESHTRLPPPPRL
Trigger: CAGGCGCGGAGGAGGGGGCAAGCGTGTGTGAGATTCAGTGGTCCATGCGTGCGTTTGTCGTGTAAGGGTCATTCCTGGGGTTTGGAGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000367737.9
CDS TCA 90 bp AACCCCAGGAATGACCCTTACACGACAAACGCACGCATGGACCACTaGATCTCACACACGCTTGCCCCCTCCTCCGCGCCTGCTGTTCCT +
Preference number: 5 (lower is better)
Translates to: NPRNDPYTTNARMDH*ISHTLAPSSAPAVP
Trigger: AGGAACAGCAGGCGCGGAGGAGGGGGCAAGCGTGTGTGAGATTCAGTGGTCCATGCGTGCGTTTGTCGTGTAAGGGTCATTCCTGGGGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000367737.9
CDS GCA 90 bp GTGTTCACAACACAGGTAACTCTTATCAATGGACTGCCCCGGGGCTaGAGGGAGGTCCTCCGCATCAGCAGGCCGCTGCTTCTTCCTGTC +
Preference number: 5 (lower is better)
Translates to: VFTTQVTLINGLPRG*REVLRISRPLLLPV
Trigger: GACAGGAAGAAGCAGCGGCCTGCTGATGCGGAGGACCTCCCTGCAGCCCCGGGGCAGTCCATTGATAAGAGTTACCTGTGTTGTGAACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
ENST00000478330.1
CDS CCA 90 bp TCATCCCAACCCCTCCCAGGCTTCCTCAGGGTCCGCTCCAAAGCCTaGGCTGTTTCTAGGAGCTCTGGTGTGGCAAGTTTTTGCTCAGGG +
Preference number: 5 (lower is better)
Translates to: SSQPLPGFLRVRSKA*AVSRSSGVASFCSG
Trigger: CCCTGAGCAAAAACTTGCCACACCAGAGCTCCTAGAAACAGCCCAGGCTTTGGAGCGGACCCTGAGGAAGCCTGGGAGGGGTTGGGATGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
ENST00000466643.1
CDS GCA 90 bp CCCTTGTCCAACACCACCTGGAACGAGGCATCAGGAAACTCCATCTaGGTCATGTCCATCTTCAAGAAGCTCATCTGGGGCCGTCGGGTG +
Preference number: 5 (lower is better)
Translates to: PLSNTTWNEASGNSI*VMSIFKKLIWGRRV
Trigger: CACCCGACGGCCCCAGATGAGCTTCTTGAAGATGGACATGACGCAGATGGAGTTTCCTGATGCCTCGTTCCAGGTGGTGTTGGACAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
ENST00000485629.1
CDS-3UTR CAA 90 bp GGACGTGGTGTAGGAAGCAAAGACAAACCAACCCAAGTGGTACTGAAGAGGACAGAATCTCACACACGCTaGCCCCCTCCTCCGCGCCTG +
Preference number: 5 (lower is better)
Translates to: GRGVGSKDKPTQVVLKRTESHTR*PPPPRL
Trigger: CAGGCGCGGAGGAGGGGGCAAGCGTGTGTGAGATTC...TGTCCTCTTCAGTACCACTTGGGTTGGTTTGTCTTTGCTTCCTACACCACGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CAA 90 bp TTGTTAAGGCATGCAGTGTGTGCTAGGGGCTTCAGCAGGGAACTCCACTCAAGGGCATCCAGGGTGCCCTaGTCCAACACCACCTGGAAC +
Preference number: 5 (lower is better)
Translates to: LLRHAVCARGFSRELHSRASRVP*SNTTWN
Trigger: GTTCCAGGTGGTGTTGGACAAGGGCACCCTGGATGC...CCTTGAGTGGAGTTCCCTGCTGAAGCCCCTAGCACACACTGCATGCCTTAACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CAA 90 bp GAGAAAAAGACAAATGGCTTAGGCTACAAGGTTTGGGTCACCAAGGAAAGCTGTCTCCCCAGCCTGGCCTaGCGGCGCAGCTGGCTGCAC +
Preference number: 5 (lower is better)
Translates to: EKKTNGLGYKVWVTKESCLPSLA*RRSWLH
Trigger: GTGCAGCCAGCTGCGCCGCAAGGCCAGGCTGGGGAG...ACAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAGCCATTTGTCTTTTTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000362019.7
CDS GCA 90 bp CTTGGTCATGATGAAGGCAAAGACAGGCAAGGAGAACTGAGGCTCTaGTTCCAACACCTGGTCCTGGCTGTTGGCCACTTGGTGCACCCT +
Preference number: 5 (lower is better)
Translates to: LGHDEGKDRQGELRL*FQHLVLAVGHLVHP
Trigger: AGGGTGCACCAAGTGGCCAACAGCCAGGACCAGGTGTTGGAAGCAGAGCCTCAGTTCTCCTTGCCTGTCTTTGCCTTCATCATGACCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000362019.7
CDS TCA 90 bp TCAGTCGACGGAAGTATCGCTTGTCATCCCCTTGCACATCCTCAATaGCATAGTCACCGCTCAAGGGGCTGCAGTCTTGGTGCTGAACGG +
Preference number: 5 (lower is better)
Translates to: SVDGSIACHPLAHPQ*HSHRSRGCSLGAER
Trigger: CCGTTCAGCACCAAGACTGCAGCCCCTTGAGCGGTGACTATGTCATTGAGGATGTGCAAGGGGATGACAAGCGATACTTCCGTCGACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS GCA 90 bp TGCTTCTCCTCCTCCTGCCAAGCTGGCGATATAGTCCAGGCCATCTaGAATGTGGACCTTCATTCGGTCACTCTGGGAGAAGCCAAACCA +
Preference number: 5 (lower is better)
Translates to: CFSSSCQAGDIVQAI*NVDLHSVTLGEAKP
Trigger: TGGTTTGGCTTCTCCCAGAGTGACCGAATGAAGGTCCACATTGCAGATGGCCTGGACTATATCGCCAGCTTGGCAGGAGGAGGAGAAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
ENST00000466643.1
CDS CCA 90 bp TCATCTGTCAGGACAGCATCCAGGGTGCCCTTGTCCAACACCACCTaGAACGAGGCATCAGGAAACTCCATCTGCGTCATGTCCATCTTC +
Preference number: 5 (lower is better)
Translates to: SSVRTASRVPLSNTT*NEASGNSICVMSIF
Trigger: GAAGATGGACATGACGCAGATGGAGTTTCCTGATGCCTCGTTCCAGGTGGTGTTGGACAAGGGCACCCTGGATGCTGTCCTGACAGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
ENST00000485629.1
CDS CCA 90 bp TCAGGGTCCGCTCCAAAGCCTGGGCTGTTTCTAGGAGCTCTGGTGTaGCAAGTTTTTGCTCAGGGTGCAGCTGACAGAACAGGATCTCAT +
Preference number: 5 (lower is better)
Translates to: SGSAPKPGLFLGALV*QVFAQGAADRTGSH
Trigger: ATGAGATCCTGTTCTGTCAGCTGCACCCTGAGCAAAAACTTGCCACACCAGAGCTCCTAGAAACAGCCCAGGCTTTGGAGCGGACCCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
ENST00000466643.1
CDS-3UTR CAA 90 bp TTGGAACCATTTCAGCAGCAGTTTCATCCACAGGGAGACAGAGTAAATGCTCTCGAATCTCACACACGCTaGCCCCCTCCTCCGCGCCTG +
Preference number: 5 (lower is better)
Translates to: LEPFQQQFHPQGDRVNALESHTR*PPPPRL
Trigger: CAGGCGCGGAGGAGGGGGCAAGCGTGTGTGAGATTC...GAGAGCATTTACTCTGTCTCCCTGTGGATGAAACTGCTGCTGAAATGGTTCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS TCA 90 bp CATCCTTCAGCAACCTGGCTTCGGACTGCACCACATTCCTGTTGCTaGGGAAGATCAGTCGACGGAAGTATCGCTTGTCATCCCCTTGCA +
Preference number: 5 (lower is better)
Translates to: HPSATWLRTAPHSCC*GRSVDGSIACHPLA
Trigger: TGCAAGGGGATGACAAGCGATACTTCCGTCGACTGATCTTCCTCAGCAACAGGAATGTGGTGCAGTCCGAAGCCAGGTTGCTGAAGGATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
ENST00000478330.1
CDS GCA 90 bp GTTGTAAGGTCTTCTCTTCCTCATCTGTCAGGACAGCATCCAGGGTaGCCTTGTCCAACACCACCTGGAACGAGGCATCAGGAAACTCCA +
Preference number: 5 (lower is better)
Translates to: VVRSSLPHLSGQHPG*PCPTPPGTRHQETP
Trigger: TGGAGTTTCCTGATGCCTCGTTCCAGGTGGTGTTGGACAAGGGCACCCTGGATGCTGTCCTGACAGATGAGGAAGAGAAGACCTTACAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
ENST00000485629.1
CDS CCA 90 bp CTCCTGAGCACACAGCTCAAAGATCTGAAGGGCAGAGCCAGGGACTaGCCTGAACTTGGTCATGATGAAGGCAAAGACAGGCAAGGAGAA +
Preference number: 5 (lower is better)
Translates to: LLSTQLKDLKGRARD*PELGHDEGKDRQGE
Trigger: TTCTCCTTGCCTGTCTTTGCCTTCATCATGACCAAGTTCAGGCCAGTCCCTGGCTCTGCCCTTCAGATCTTTGAGCTGTGTGCTCAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000362019.7
CDS-3UTR CAA 90 bp GGAACCATTTCAGCAGCAGTTTCATCCACAGGGAGACAGAGTAAATGCTCTCTCCTGGCTGTTGGCCACTaGGTGCACCCTCACCATCCA +
Preference number: 5 (lower is better)
Translates to: GTISAAVSSTGRQSKCSLLAVGH*VHPHHP
Trigger: TGGATGGTGAGGGTGCACCAAGTGGCCAACAGCCAG...GAGAGAGCATTTACTCTGTCTCCCTGTGGATGAAACTGCTGCTGAAATGGTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000362019.7
CDS-3UTR CAA 90 bp AAAAGTACTGTGCGTTGTATTTCTTCATTCTCTGGCAGGCTGGGAGTCCAAGGTACCTGGTCCTGGCTGTaGGCCACTTGGTGCACCCTC +
Preference number: 5 (lower is better)
Translates to: KSTVRCISSFSGRLGVQGTWSWL*ATWCTL
Trigger: GAGGGTGCACCAAGTGGCCAACAGCCAGGACCAGGT...ACCTTGGACTCCCAGCCTGCCAGAGAATGAAGAAATACAACGCACAGTACTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000362019.7
CDS-3UTR CAA 90 bp ATTTATGGTCTTTTGGCATCTTGCTCTGCTATCTCACTTGAGATCACTCCTATACTCCCCAGCCTGGCCTaGCGGCGCAGCTGGCTGCAC +
Preference number: 5 (lower is better)
Translates to: IYGLLASCSAISLEITPILPSLA*RRSWLH
Trigger: GTGCAGCCAGCTGCGCCGCAAGGCCAGGCTGGGGAG...TATAGGAGTGATCTCAAGTGAGATAGCAGAGCAAGATGCCAAAAGACCATAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000362019.7
CDS CCA 90 bp GGTCACTCTGGGAGAAGCCAAACCACTGGGTGGCCACTTCCAACATaGAGGGATCGATCTCCACAGCATCAATGCAGGACTTTGGAAAAT +
Preference number: 5 (lower is better)
Translates to: GHSGRSQTTGWPLPT*RDRSPQHQCRTLEN
Trigger: ATTTTCCAAAGTCCTGCATTGATGCTGTGGAGATCGATCCCTCCATGTTGGAAGTGGCCACCCAGTGGTTTGGCTTCTCCCAGAGTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
ENST00000466643.1
CDS-3UTR CAA 90 bp AGCAAACAAACACTAGAGACTTTAGTCTGCCAGGTCTCTAACATGCAAAGCCATGAATCTCACACACGCTaGCCCCCTCCTCCGCGCCTG +
Preference number: 5 (lower is better)
Translates to: SKQTLETLVCQVSNMQSHESHTR*PPPPRL
Trigger: CAGGCGCGGAGGAGGGGGCAAGCGTGTGTGAGATTC...ATGGCTTTGCATGTTAGAGACCTGGCAGACTAAAGTCTCTAGTGTTTGTTTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CAA 90 bp TTGTTAAGGCATGCAGTGTGTGCTAGGGGCTTCAGCAGGGAACTCCACTCAAGGAACAGCCACATTGATTaGTTCCCCCACTCCAAACCC +
Preference number: 5 (lower is better)
Translates to: LLRHAVCARGFSRELHSRNSHID*FPHSKP
Trigger: GGGTTTGGAGTGGGGGAACAAATCAATGTGGCTGTT...CCTTGAGTGGAGTTCCCTGCTGAAGCCCCTAGCACACACTGCATGCCTTAACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000367737.9
CDS TCA 90 bp CACTATATCCCGATAGCCCACATCATACAGTTGCTCACTCAGTTCTaGGTTGCCACACCCAATCACCAGCACACGACAAACGCACGCATG +
Preference number: 5 (lower is better)
Translates to: HYIPIAHIIQLLTQF*VATPNHQHTTNARM
Trigger: CATGCGTGCGTTTGTCGTGTGCTGGTGATTGGGTGTGGCAACTCAGAACTGAGTGAGCAACTGTATGATGTGGGCTATCGGGATATAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000362019.7
CDS TCA 90 bp GTTTCTAGGAGCTCTGGTGTGGCAAGTTTTTGCTCAGGGTGCAGCTaGCAGAACAGGATCTCATTCACTTCACCCTCAATTCGCCGGACA +
Preference number: 5 (lower is better)
Translates to: VSRSSGVASFCSGCS*QNRISFTSPSIRRT
Trigger: TGTCCGGCGAATTGAGGGTGAAGTGAATGAGATCCTGTTCTGTCAGCTGCACCCTGAGCAAAAACTTGCCACACCAGAGCTCCTAGAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
ENST00000466643.1
CDS TCA 90 bp GCTTGGCCTAAGCAGTCACACAATTTTCACCGTCTTGAGCATATCTaGCAAGACATACGTGTCATCCCAACCCCTCCCAGGCTTCCTCAG +
Preference number: 5 (lower is better)
Translates to: AWPKQSHNFHRLEHI*QDIRVIPTPPRLPQ
Trigger: CTGAGGAAGCCTGGGAGGGGTTGGGATGACACGTATGTCTTGTCAGATATGCTCAAGACGGTGAAAATTGTGTGACTGCTTAGGCCAAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
ENST00000466643.1
CDS GCA 90 bp ATACCATTTGAGGAGCTTGCCCACCACACGCAGGCTCCGGGACACTaGAGTGGGAATTCTTTCCACGGAAAAACAGCCACATTGATTTGT +
Preference number: 5 (lower is better)
Translates to: IPFEELAHHTQAPGH*SGNSFHGKTATLIC
Trigger: ACAAATCAATGTGGCTGTTTTTCCGTGGAAAGAATTCCCACTGCAGTGTCCCGGAGCCTGCGTGTGGTGGGCAAGCTCCTCAAATGGTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000367737.9
CDS-3UTR CAA 90 bp AAAAAGACAAATGGCTTAGGCTACAAGGTTTGGGTCACCAAGGAAAGCTGTCAACAAGGGGCTGCAGTCTaGGTGCTGAACGGTCCGGAC +
Preference number: 5 (lower is better)
Translates to: KKTNGLGYKVWVTKESCQQGAAV*VLNGPD
Trigger: GTCCGGACCGTTCAGCACCAAGACTGCAGCCCCTTG...TTGACAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAGCCATTTGTCTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CAA 90 bp GGAACCATTTCAGCAGCAGTTTCATCCACAGGGAGACAGAGTAAATGCTCTCTCCGACGGAAGTATCGCTaGTCATCCCCTTGCACATCC +
Preference number: 5 (lower is better)
Translates to: GTISAAVSSTGRQSKCSLRRKYR*SSPCTS
Trigger: GGATGTGCAAGGGGATGACAAGCGATACTTCCGTCG...GAGAGAGCATTTACTCTGTCTCCCTGTGGATGAAACTGCTGCTGAAATGGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CAA 90 bp GGACGTGGTGTAGGAAGCAAAGACAAACCAACCCAAGTGGTACTGAAGAGGACAGGGGCTTGCACACACTaGTTAAGGCATGCAGTGTGT +
Preference number: 5 (lower is better)
Translates to: GRGVGSKDKPTQVVLKRTGACTH*LRHAVC
Trigger: ACACACTGCATGCCTTAACAAGTGTGTGCAAGCCCC...TGTCCTCTTCAGTACCACTTGGGTTGGTTTGTCTTTGCTTCCTACACCACGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CAA 90 bp AGCAAACAAACACTAGAGACTTTAGTCTGCCAGGTCTCTAACATGCAAAGCCATCTGGCTGTTGGCCACTaGGTGCACCCTCACCATCCA +
Preference number: 5 (lower is better)
Translates to: SKQTLETLVCQVSNMQSHLAVGH*VHPHHP
Trigger: TGGATGGTGAGGGTGCACCAAGTGGCCAACAGCCAG...ATGGCTTTGCATGTTAGAGACCTGGCAGACTAAAGTCTCTAGTGTTTGTTTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000362019.7
CDS-3UTR CAA 90 bp AAAAGTACTGTGCGTTGTATTTCTTCATTCTCTGGCAGGCTGGGAGTCCAAGGTCGACGGAAGTATCGCTaGTCATCCCCTTGCACATCC +
Preference number: 5 (lower is better)
Translates to: KSTVRCISSFSGRLGVQGRRKYR*SSPCTS
Trigger: GGATGTGCAAGGGGATGACAAGCGATACTTCCGTCG...ACCTTGGACTCCCAGCCTGCCAGAGAATGAAGAAATACAACGCACAGTACTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CAA 90 bp TTGTTAAGGCATGCAGTGTGTGCTAGGGGCTTCAGCAGGGAACTCCACTCAAGGAACTCATTCCCAGTGTaGGGTCCTTACTGTCAACAT +
Preference number: 5 (lower is better)
Translates to: LLRHAVCARGFSRELHSRNSFPV*GPYCQH
Trigger: ATGTTGACAGTAAGGACCCAACACTGGGAATGAGTT...CCTTGAGTGGAGTTCCCTGCTGAAGCCCCTAGCACACACTGCATGCCTTAACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CAA 90 bp GGACGTGGTGTAGGAAGCAAAGACAAACCAACCCAAGTGGTACTGAAGAGGACACTTAGGCTACAAGGTTaGGGTCACCAAGGAAAGCTG +
Preference number: 5 (lower is better)
Translates to: GRGVGSKDKPTQVVLKRTLRLQG*GHQGKL
Trigger: CAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAG...TGTCCTCTTCAGTACCACTTGGGTTGGTTTGTCTTTGCTTCCTACACCACGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS CCA 90 bp TCAGGAAACTCCATCTGCGTCATGTCCATCTTCAAGAAGCTCATCTaGGGCCGTCGGGTGGCATTACATTCCTTCATTTGCTTGATGACA +
Preference number: 5 (lower is better)
Translates to: SGNSICVMSIFKKLI*GRRVALHSFICLMT
Trigger: TGTCATCAAGCAAATGAAGGAATGTAATGCCACCCGACGGCCCCAGATGAGCTTCTTGAAGATGGACATGACGCAGATGGAGTTTCCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
ENST00000485629.1
CDS-3UTR CAA 90 bp GCATCTTGCTCTGCTATCTCACTTGAGATCACTCCTATAGAACTAATAGAGGAAGCATCCAGGGTGCCCTaGTCCAACACCACCTGGAAC +
Preference number: 5 (lower is better)
Translates to: ASCSAISLEITPIELIEEASRVP*SNTTWN
Trigger: GTTCCAGGTGGTGTTGGACAAGGGCACCCTGGATGC...TTCCTCTATTAGTTCTATAGGAGTGATCTCAAGTGAGATAGCAGAGCAAGATGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CAA 90 bp AGAAACCTTACTCTATTTATGGTCTTTTGGCATCTTGCTCTGCTATCTCACTTGACCTGGTCCTGGCTGTaGGCCACTTGGTGCACCCTC +
Preference number: 5 (lower is better)
Translates to: RNLTLFMVFWHLALLSHLTWSWL*ATWCTL
Trigger: GAGGGTGCACCAAGTGGCCAACAGCCAGGACCAGGT...CAAGTGAGATAGCAGAGCAAGATGCCAAAAGACCATAAATAGAGTAAGGTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000362019.7
CDS-3UTR CAA 90 bp TTGGAACCATTTCAGCAGCAGTTTCATCCACAGGGAGACAGAGTAAATGCTCTCGGGACTGGCCTGAACTaGGTCATGATGAAGGCAAAG +
Preference number: 5 (lower is better)
Translates to: LEPFQQQFHPQGDRVNALGTGLN*VMMKAK
Trigger: CTTTGCCTTCATCATGACCAAGTTCAGGCCAGTCCC...GAGAGCATTTACTCTGTCTCCCTGTGGATGAAACTGCTGCTGAAATGGTTCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000362019.7
CDS-3UTR CAA 90 bp AGAAACCTTACTCTATTTATGGTCTTTTGGCATCTTGCTCTGCTATCTCACTTGCAAGGGGCTGCAGTCTaGGTGCTGAACGGTCCGGAC +
Preference number: 5 (lower is better)
Translates to: RNLTLFMVFWHLALLSHLQGAAV*VLNGPD
Trigger: GTCCGGACCGTTCAGCACCAAGACTGCAGCCCCTTG...CAAGTGAGATAGCAGAGCAAGATGCCAAAAGACCATAAATAGAGTAAGGTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CAA 90 bp TTGTTAAGGCATGCAGTGTGTGCTAGGGGCTTCAGCAGGGAACTCCACTCAAGGCATCAATGCAGGACTTaGGAAAATGATCGTGGACAA +
Preference number: 5 (lower is better)
Translates to: LLRHAVCARGFSRELHSRHQCRT*ENDRGQ
Trigger: TTGTCCACGATCATTTTCCAAAGTCCTGCATTGATG...CCTTGAGTGGAGTTCCCTGCTGAAGCCCCTAGCACACACTGCATGCCTTAACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CAA 90 bp TTGGAACCATTTCAGCAGCAGTTTCATCCACAGGGAGACAGAGTAAATGCTCTCGGGGCTTGCACACACTaGTTAAGGCATGCAGTGTGT +
Preference number: 5 (lower is better)
Translates to: LEPFQQQFHPQGDRVNALGACTH*LRHAVC
Trigger: ACACACTGCATGCCTTAACAAGTGTGTGCAAGCCCC...GAGAGCATTTACTCTGTCTCCCTGTGGATGAAACTGCTGCTGAAATGGTTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS GCA 90 bp AAGAAGCTCATCTGGGGCCGTCGGGTGGCATTACATTCCTTCATTTaGTTGATGACAACCTCACTGATGTCGATGTTCACTATATCCCGA +
Preference number: 5 (lower is better)
Translates to: KKLIWGRRVALHSFI*LMTTSLMSMFTISR
Trigger: TCGGGATATAGTGAACATCGACATCAGTGAGGTTGTCATCAAGCAAATGAAGGAATGTAATGCCACCCGACGGCCCCAGATGAGCTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
ENST00000485629.1
CDS-3UTR CAA 90 bp AGAAACCTTACTCTATTTATGGTCTTTTGGCATCTTGCTCTGCTATCTCACTTGGCATCCAGGGTGCCCTaGTCCAACACCACCTGGAAC +
Preference number: 5 (lower is better)
Translates to: RNLTLFMVFWHLALLSHLASRVP*SNTTWN
Trigger: GTTCCAGGTGGTGTTGGACAAGGGCACCCTGGATGC...CAAGTGAGATAGCAGAGCAAGATGCCAAAAGACCATAAATAGAGTAAGGTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CAA 90 bp TTGTTAAGGCATGCAGTGTGTGCTAGGGGCTTCAGCAGGGAACTCCACTCAAGGTCTATTTATGGTCTTTaGGCATCTTGCTCTGCTATC +
Preference number: 5 (lower is better)
Translates to: LLRHAVCARGFSRELHSRSIYGL*ASCSAI
Trigger: GATAGCAGAGCAAGATGCCAAAAGACCATAAATAGA...CCTTGAGTGGAGTTCCCTGCTGAAGCCCCTAGCACACACTGCATGCCTTAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CAA 90 bp ACAAATGGCTTAGGCTACAAGGTTTGGGTCACCAAGGAAAGCTGTCAAATAATGGGGACTGGCCTGAACTaGGTCATGATGAAGGCAAAG +
Preference number: 5 (lower is better)
Translates to: TNGLGYKVWVTKESCQIMGTGLN*VMMKAK
Trigger: CTTTGCCTTCATCATGACCAAGTTCAGGCCAGTCCC...CATTATTTGACAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAGCCATTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000362019.7
CDS-3UTR CAA 90 bp CAAAAGCAAACCAGTATAAGTAGAGACGCAATAAAATTTGGATGTCTTGAGTTCCAAGGGGCTGCAGTCTaGGTGCTGAACGGTCCGGAC +
Preference number: 5 (lower is better)
Translates to: QKQTSISRDAIKFGCLEFQGAAV*VLNGPD
Trigger: GTCCGGACCGTTCAGCACCAAGACTGCAGCCCCTTG...GAACTCAAGACATCCAAATTTTATTGCGTCTCTACTTATACTGGTTTGCTTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CAA 90 bp GTAGCTGAGTGTGAAACCAAGAAAAATACGAAGCTTCAAAAGTACTGTGCGTTGCGACGGAAGTATCGCTaGTCATCCCCTTGCACATCC +
Preference number: 5 (lower is better)
Translates to: VAECETKKNTKLQKYCALRRKYR*SSPCTS
Trigger: GGATGTGCAAGGGGATGACAAGCGATACTTCCGTCG...CAACGCACAGTACTTTTGAAGCTTCGTATTTTTCTTGGTTTCACACTCAGCTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CAA 90 bp CACTCAGCAAATGTGAGCAAACAAACACTAGAGACTTTAGTCTGCCAGGTCTCTTGCACCACATTCCTGTaGCTGAGGAAGATCAGTCGA +
Preference number: 5 (lower is better)
Translates to: HSANVSKQTLETLVCQVSCTTFL*LRKISR
Trigger: TCGACTGATCTTCCTCAGCAACAGGAATGTGGTGCA...AGAGACCTGGCAGACTAAAGTCTCTAGTGTTTGTTTGCTCACATTTGCTGAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CAA 90 bp AAAAAGACAAATGGCTTAGGCTACAAGGTTTGGGTCACCAAGGAAAGCTGTCAACCAGCGATCATGGCTTaGTGGTGTTCACAACACAGG +
Preference number: 5 (lower is better)
Translates to: KKTNGLGYKVWVTKESCQPAIMA*WCSQHR
Trigger: CCTGTGTTGTGAACACCACAAAGCCATGATCGCTGG...TTGACAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAGCCATTTGTCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CAA 90 bp ACAAATGGCTTAGGCTACAAGGTTTGGGTCACCAAGGAAAGCTGTCAAATAATGCCAGCGATCATGGCTTaGTGGTGTTCACAACACAGG +
Preference number: 5 (lower is better)
Translates to: TNGLGYKVWVTKESCQIMPAIMA*WCSQHR
Trigger: CCTGTGTTGTGAACACCACAAAGCCATGATCGCTGG...CATTATTTGACAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAGCCATTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CAA 90 bp GGACGTGGTGTAGGAAGCAAAGACAAACCAACCCAAGTGGTACTGAAGAGGACATCTCGGCACACAAGGTaGAGAATAAAAACACCTTCA +
Preference number: 5 (lower is better)
Translates to: GRGVGSKDKPTQVVLKRTSRHTR*RIKTPS
Trigger: TGAAGGTGTTTTTATTCTCAACCTTGTGTGCCGAGA...TGTCCTCTTCAGTACCACTTGGGTTGGTTTGTCTTTGCTTCCTACACCACGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CAA 90 bp GAAAAAGACAAATGGCTTAGGCTACAAGGTTTGGGTCACCAAGGAAAGCTGTCAAACAGCCACATTGATTaGTTCCCCCACTCCAAACCC +
Preference number: 5 (lower is better)
Translates to: EKDKWLRLQGLGHQGKLSNSHID*FPHSKP
Trigger: GGGTTTGGAGTGGGGGAACAAATCAATGTGGCTGTT...TGACAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAGCCATTTGTCTTTTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000367737.9
CDS-3UTR CAA 90 bp TTGGAACCATTTCAGCAGCAGTTTCATCCACAGGGAGACAGAGTAAATGCTCTCGGAAAAACAGCCACATaGATTTGTTCCCCCACTCCA +
Preference number: 5 (lower is better)
Translates to: LEPFQQQFHPQGDRVNALGKTAT*ICSPTP
Trigger: TGGAGTGGGGGAACAAATCAATGTGGCTGTTTTTCC...GAGAGCATTTACTCTGTCTCCCTGTGGATGAAACTGCTGCTGAAATGGTTCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000367737.9
CDS-3UTR CAA 90 bp ACAAATGGCTTAGGCTACAAGGTTTGGGTCACCAAGGAAAGCTGTCAAATAATGCCTGTGAGATACCATTaGAGGAGCTTGCCCACCACA +
Preference number: 5 (lower is better)
Translates to: TNGLGYKVWVTKESCQIMPVRYH*RSLPTT
Trigger: TGTGGTGGGCAAGCTCCTCAAATGGTATCTCACAGG...CATTATTTGACAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAGCCATTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000367737.9
CDS-3UTR CAA 90 bp AAAAAGACAAATGGCTTAGGCTACAAGGTTTGGGTCACCAAGGAAAGCTGTCAACCTGTGAGATACCATTaGAGGAGCTTGCCCACCACA +
Preference number: 5 (lower is better)
Translates to: KKTNGLGYKVWVTKESCQPVRYH*RSLPTT
Trigger: TGTGGTGGGCAAGCTCCTCAAATGGTATCTCACAGG...TTGACAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAGCCATTTGTCTTTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000367737.9
CDS-3UTR CAA 90 bp AAAAAGACAAATGGCTTAGGCTACAAGGTTTGGGTCACCAAGGAAAGCTGTCAATGCACCACATTCCTGTaGCTGAGGAAGATCAGTCGA +
Preference number: 5 (lower is better)
Translates to: KKTNGLGYKVWVTKESCQCTTFL*LRKISR
Trigger: TCGACTGATCTTCCTCAGCAACAGGAATGTGGTGCA...TTGACAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAGCCATTTGTCTTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CAA 90 bp GTAGCTGAGTGTGAAACCAAGAAAAATACGAAGCTTCAAAAGTACTGTGCGTTGCCAGCGATCATGGCTTaGTGGTGTTCACAACACAGG +
Preference number: 5 (lower is better)
Translates to: VAECETKKNTKLQKYCALPAIMA*WCSQHR
Trigger: CCTGTGTTGTGAACACCACAAAGCCATGATCGCTGG...CAACGCACAGTACTTTTGAAGCTTCGTATTTTTCTTGGTTTCACACTCAGCTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CAA 90 bp TTGGAACCATTTCAGCAGCAGTTTCATCCACAGGGAGACAGAGTAAATGCTCTCAACTCATTCCCAGTGTaGGGTCCTTACTGTCAACAT +
Preference number: 5 (lower is better)
Translates to: LEPFQQQFHPQGDRVNALNSFPV*GPYCQH
Trigger: ATGTTGACAGTAAGGACCCAACACTGGGAATGAGTT...GAGAGCATTTACTCTGTCTCCCTGTGGATGAAACTGCTGCTGAAATGGTTCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CAA 90 bp GTAGCTGAGTGTGAAACCAAGAAAAATACGAAGCTTCAAAAGTACTGTGCGTTGTGGTGTGGCAAGTTTTaGCTCAGGGTGCAGCTGACA +
Preference number: 5 (lower is better)
Translates to: VAECETKKNTKLQKYCALWCGKF*LRVQLT
Trigger: TGTCAGCTGCACCCTGAGCAAAAACTTGCCACACCA...CAACGCACAGTACTTTTGAAGCTTCGTATTTTTCTTGGTTTCACACTCAGCTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CAA 90 bp AGCAAACAAACACTAGAGACTTTAGTCTGCCAGGTCTCTAACATGCAAAGCCATCTTAGGCTACAAGGTTaGGGTCACCAAGGAAAGCTG +
Preference number: 5 (lower is better)
Translates to: SKQTLETLVCQVSNMQSHLRLQG*GHQGKL
Trigger: CAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAG...ATGGCTTTGCATGTTAGAGACCTGGCAGACTAAAGTCTCTAGTGTTTGTTTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CAA 90 bp GGAACCATTTCAGCAGCAGTTTCATCCACAGGGAGACAGAGTAAATGCTCTCTCACCTTTTCCCTGGGCTaGATATATTTATGTAGCACC +
Preference number: 5 (lower is better)
Translates to: GTISAAVSSTGRQSKCSLTFSLG*IYLCST
Trigger: GGTGCTACATAAATATATCAAGCCCAGGGAAAAGGT...GAGAGAGCATTTACTCTGTCTCCCTGTGGATGAAACTGCTGCTGAAATGGTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000367737.9
CDS-3UTR CAA 90 bp ACAAATGGCTTAGGCTACAAGGTTTGGGTCACCAAGGAAAGCTGTCAAATAATGTCGCTTGTCATCCCCTaGCACATCCTCAATGACATA +
Preference number: 5 (lower is better)
Translates to: TNGLGYKVWVTKESCQIMSLVIP*HILNDI
Trigger: TATGTCATTGAGGATGTGCAAGGGGATGACAAGCGA...CATTATTTGACAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAGCCATTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CAA 90 bp CTATTTATGGTCTTTTGGCATCTTGCTCTGCTATCTCACTTGAGATCACTCCTATGCACCACATTCCTGTaGCTGAGGAAGATCAGTCGA +
Preference number: 5 (lower is better)
Translates to: LFMVFWHLALLSHLRSLLCTTFL*LRKISR
Trigger: TCGACTGATCTTCCTCAGCAACAGGAATGTGGTGCA...TAGGAGTGATCTCAAGTGAGATAGCAGAGCAAGATGCCAAAAGACCATAAATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CAA 90 bp AGAAACCTTACTCTATTTATGGTCTTTTGGCATCTTGCTCTGCTATCTCACTTGTGGTGTGGCAAGTTTTaGCTCAGGGTGCAGCTGACA +
Preference number: 5 (lower is better)
Translates to: RNLTLFMVFWHLALLSHLWCGKF*LRVQLT
Trigger: TGTCAGCTGCACCCTGAGCAAAAACTTGCCACACCA...CAAGTGAGATAGCAGAGCAAGATGCCAAAAGACCATAAATAGAGTAAGGTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CAA 90 bp AGGTCACATGTAGCTGAGTGTGAAACCAAGAAAAATACGAAGCTTCAAAAGTACTGGTGTGGCAAGTTTTaGCTCAGGGTGCAGCTGACA +
Preference number: 5 (lower is better)
Translates to: RSHVAECETKKNTKLQKYWCGKF*LRVQLT
Trigger: TGTCAGCTGCACCCTGAGCAAAAACTTGCCACACCA...GTACTTTTGAAGCTTCGTATTTTTCTTGGTTTCACACTCAGCTACATGTGACCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CAA 90 bp CTATTTATGGTCTTTTGGCATCTTGCTCTGCTATCTCACTTGAGATCACTCCTACTTAGGCTACAAGGTTaGGGTCACCAAGGAAAGCTG +
Preference number: 5 (lower is better)
Translates to: LFMVFWHLALLSHLRSLLLRLQG*GHQGKL
Trigger: CAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAG...TAGGAGTGATCTCAAGTGAGATAGCAGAGCAAGATGCCAAAAGACCATAAATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CAA 90 bp CACTCAGCAAATGTGAGCAAACAAACACTAGAGACTTTAGTCTGCCAGGTCTCTCATTCCTTCATTTGCTaGATGACAACCTCACTGATG +
Preference number: 5 (lower is better)
Translates to: HSANVSKQTLETLVCQVSHSFIC*MTTSLM
Trigger: CATCAGTGAGGTTGTCATCAAGCAAATGAAGGAATG...AGAGACCTGGCAGACTAAAGTCTCTAGTGTTTGTTTGCTCACATTTGCTGAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CAA 90 bp CTATTTATGGTCTTTTGGCATCTTGCTCTGCTATCTCACTTGAGATCACTCCTATCGCTTGTCATCCCCTaGCACATCCTCAATGACATA +
Preference number: 5 (lower is better)
Translates to: LFMVFWHLALLSHLRSLLSLVIP*HILNDI
Trigger: TATGTCATTGAGGATGTGCAAGGGGATGACAAGCGA...TAGGAGTGATCTCAAGTGAGATAGCAGAGCAAGATGCCAAAAGACCATAAATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CAA 90 bp ACAAATGGCTTAGGCTACAAGGTTTGGGTCACCAAGGAAAGCTGTCAAATAATGCATTCCTTCATTTGCTaGATGACAACCTCACTGATG +
Preference number: 5 (lower is better)
Translates to: TNGLGYKVWVTKESCQIMHSFIC*MTTSLM
Trigger: CATCAGTGAGGTTGTCATCAAGCAAATGAAGGAATG...CATTATTTGACAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAGCCATTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CAA 90 bp AGGTCACATGTAGCTGAGTGTGAAACCAAGAAAAATACGAAGCTTCAAAAGTACTCGCTTGTCATCCCCTaGCACATCCTCAATGACATA +
Preference number: 5 (lower is better)
Translates to: RSHVAECETKKNTKLQKYSLVIP*HILNDI
Trigger: TATGTCATTGAGGATGTGCAAGGGGATGACAAGCGA...GTACTTTTGAAGCTTCGTATTTTTCTTGGTTTCACACTCAGCTACATGTGACCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CAA 90 bp GCATCTTGCTCTGCTATCTCACTTGAGATCACTCCTATAGAACTAATAGAGGAAAACTCATTCCCAGTGTaGGGTCCTTACTGTCAACAT +
Preference number: 5 (lower is better)
Translates to: ASCSAISLEITPIELIEENSFPV*GPYCQH
Trigger: ATGTTGACAGTAAGGACCCAACACTGGGAATGAGTT...TTCCTCTATTAGTTCTATAGGAGTGATCTCAAGTGAGATAGCAGAGCAAGATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CAA 90 bp ACAAATGGCTTAGGCTACAAGGTTTGGGTCACCAAGGAAAGCTGTCAAATAATGTCTCGGCACACAAGGTaGAGAATAAAAACACCTTCA +
Preference number: 5 (lower is better)
Translates to: TNGLGYKVWVTKESCQIMSRHTR*RIKTPS
Trigger: TGAAGGTGTTTTTATTCTCAACCTTGTGTGCCGAGA...CATTATTTGACAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAGCCATTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CAA 90 bp CACTCAGCAAATGTGAGCAAACAAACACTAGAGACTTTAGTCTGCCAGGTCTCTCAAAAGTACTGTGCGTaGTATTTCTTCATTCTCTGG +
Preference number: 5 (lower is better)
Translates to: HSANVSKQTLETLVCQVSQKYCA*YFFILW
Trigger: CCAGAGAATGAAGAAATACAACGCACAGTACTTTTG...AGAGACCTGGCAGACTAAAGTCTCTAGTGTTTGTTTGCTCACATTTGCTGAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CAA 90 bp ATTTATGGTCTTTTGGCATCTTGCTCTGCTATCTCACTTGAGATCACTCCTATAGGAAAAACAGCCACATaGATTTGTTCCCCCACTCCA +
Preference number: 5 (lower is better)
Translates to: IYGLLASCSAISLEITPIGKTAT*ICSPTP
Trigger: TGGAGTGGGGGAACAAATCAATGTGGCTGTTTTTCC...TATAGGAGTGATCTCAAGTGAGATAGCAGAGCAAGATGCCAAAAGACCATAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000367737.9
CDS-3UTR CAA 90 bp AAAAAGACAAATGGCTTAGGCTACAAGGTTTGGGTCACCAAGGAAAGCTGTCAAACCTTTTCCCTGGGCTaGATATATTTATGTAGCACC +
Preference number: 5 (lower is better)
Translates to: KKTNGLGYKVWVTKESCQTFSLG*IYLCST
Trigger: GGTGCTACATAAATATATCAAGCCCAGGGAAAAGGT...TTGACAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAGCCATTTGTCTTTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000367737.9
CDS-3UTR CAA 90 bp ACAAATGGCTTAGGCTACAAGGTTTGGGTCACCAAGGAAAGCTGTCAAATAATGTCTATTTATGGTCTTTaGGCATCTTGCTCTGCTATC +
Preference number: 5 (lower is better)
Translates to: TNGLGYKVWVTKESCQIMSIYGL*ASCSAI
Trigger: GATAGCAGAGCAAGATGCCAAAAGACCATAAATAGA...CATTATTTGACAGCTTTCCTTGGTGACCCAAACCTTGTAGCCTAAGCCATTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CAA 90 bp AGGTCACATGTAGCTGAGTGTGAAACCAAGAAAAATACGAAGCTTCAAAAGTACCATCAATGCAGGACTTaGGAAAATGATCGTGGACAA +
Preference number: 5 (lower is better)
Translates to: RSHVAECETKKNTKLQKYHQCRT*ENDRGQ
Trigger: TTGTCCACGATCATTTTCCAAAGTCCTGCATTGATG...GTACTTTTGAAGCTTCGTATTTTTCTTGGTTTCACACTCAGCTACATGTGACCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CAA 90 bp AGGTCACATGTAGCTGAGTGTGAAACCAAGAAAAATACGAAGCTTCAAAAGTACCAAAAGTACTGTGCGTaGTATTTCTTCATTCTCTGG +
Preference number: 5 (lower is better)
Translates to: RSHVAECETKKNTKLQKYQKYCA*YFFILW
Trigger: CCAGAGAATGAAGAAATACAACGCACAGTACTTTTG...GTACTTTTGAAGCTTCGTATTTTTCTTGGTTTCACACTCAGCTACATGTGACCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS TCA 90 bp ATACATTGTCAGCTTGTAATTGCTGTTCTTCAACTACAATGCAAGTaGCACCAATTGTTTAGGTCTGTAATCTTTATGCTCCCTTCTGTG +
Preference number: 5 (lower is better)
Translates to: IHCQLVIAVLQLQCK*HQLFRSVIFMLPSV
Trigger: CACAGAAGGGAGCATAAAGATTACAGACCTAAACAATTGGTGTCACTTGCATTGTAGTTGAAGAACAGCAATTACAAGCTGACAATGTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478330.1
CDS-3UTR CAA 90 bp CAAAAGCAAACCAGTATAAGTAGAGACGCAATAAAATTTGGATGTCTTGAGTTCCATCAATGCAGGACTTaGGAAAATGATCGTGGACAA +
Preference number: 5 (lower is better)
Translates to: QKQTSISRDAIKFGCLEFHQCRT*ENDRGQ
Trigger: TTGTCCACGATCATTTTCCAAAGTCCTGCATTGATG...GAACTCAAGACATCCAAATTTTATTGCGTCTCTACTTATACTGGTTTGCTTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS-3UTR CAA 90 bp CAAAAGCAAACCAGTATAAGTAGAGACGCAATAAAATTTGGATGTCTTGAGTTCTCTCGGCACACAAGGTaGAGAATAAAAACACCTTCA +
Preference number: 5 (lower is better)
Translates to: QKQTSISRDAIKFGCLEFSRHTR*RIKTPS
Trigger: TGAAGGTGTTTTTATTCTCAACCTTGTGTGCCGAGA...GAACTCAAGACATCCAAATTTTATTGCGTCTCTACTTATACTGGTTTGCTTTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS GCA 72 bp GCCTTGCGGCGCAGCTGGCTGCACAGCCAGGCATACTaGTGTCGCTCCTGCACCGCCTCGGCCAGCCGCTCG +
Preference number: 6 (lower is better)
Translates to: ALRRSWLHSQAY*CRSCTASASRS
Trigger: CGAGCGGCTGGCCGAGGCGGTGCAGGAGCGACAGCAGTATGCCTGGCTGTGCAGCCAGCTGCGCCGCAAGGC
72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000362019.7
CDS GCA 72 bp AGCTGGCTGCACAGCCAGGCATACTGCTGTCGCTCCTaGACCGCCTCGGCCAGCCGCTCGGCACTCTCCAGC +
Preference number: 6 (lower is better)
Translates to: SWLHSQAYCCRS*TASASRSALSS
Trigger: GCTGGAGAGTGCCGAGCGGCTGGCCGAGGCGGTGCAGGAGCGACAGCAGTATGCCTGGCTGTGCAGCCAGCT
69% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000362019.7
CDS GCA 72 bp ACACACTCCCCAGCCTGGCCTTGCGGCGCAGCTGGCTaGACAGCCAGGCATACTGCTGTCGCTCCTGCACCG +
Preference number: 6 (lower is better)
Translates to: THSPAWPCGAAG*TARHTAVAPAP
Trigger: CGGTGCAGGAGCGACAGCAGTATGCCTGGCTGTGCAGCCAGCTGCGCCGCAAGGCCAGGCTGGGGAGTGTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000362019.7
CDS CCA 72 bp AGAGACACACTCCCCAGCCTGGCCTTGCGGCGCAGCTaGCTGCACAGCCAGGCATACTGCTGTCGCTCCTGC +
Preference number: 6 (lower is better)
Translates to: RDTLPSLALRRS*LHSQAYCCRSC
Trigger: GCAGGAGCGACAGCAGTATGCCTGGCTGTGCAGCCAGCTGCGCCGCAAGGCCAGGCTGGGGAGTGTGTCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000362019.7
CDS CCA 72 bp CCCCATCGCACAAGTCCAGAGACACACTCCCCAGCCTaGCCTTGCGGCGCAGCTGGCTGCACAGCCAGGCAT +
Preference number: 6 (lower is better)
Translates to: PHRTSPETHSPA*PCGAAGCTARH
Trigger: ATGCCTGGCTGTGCAGCCAGCTGCGCCGCAAGGCCAGGCTGGGGAGTGTGTCTCTGGACTTGTGCGATGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000362019.7
CDS CAA 90 bp GTGTCCCCATCGCACAAGTCCAGAGACACACTCCCCAGCCTGGCCTaGCGGCGCAGCTGGCTGCACAGCCAGGCATACTGCTGTCGCTCC +
Preference number: 6 (lower is better)
Translates to: VSPSHKSRDTLPSLA*RRSWLHSQAYCCRS
Trigger: GGAGCGACAGCAGTATGCCTGGCTGTGCAGCCAGCTGCGCCGCAAGGCCAGGCTGGGGAGTGTGTCTCTGGACTTGTGCGATGGGGACAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000362019.7
CDS GCA 72 bp CGGCCAGCCGCTCGGCACTCTCCAGCCGCACAGGCTTaGGCTGCTCCTGAGCACACAGCTCAAAGATCTGAA +
Preference number: 6 (lower is better)
Translates to: RPAARHSPAAQA*AAPEHTAQRSE
Trigger: TTCAGATCTTTGAGCTGTGTGCTCAGGAGCAGCGCAAGCCTGTGCGGCTGGAGAGTGCCGAGCGGCTGGCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000362019.7
CDS CAA 90 bp GAACTGAGGCTCTGCTTCCAACACCTGGTCCTGGCTGTTGGCCACTaGGTGCACCCTCACCATCCACCCCTCCCGGGAGAAGTGGCCCAC +
Preference number: 6 (lower is better)
Translates to: ELRLCFQHLVLAVGH*VHPHHPPLPGEVAH
Trigger: GTGGGCCACTTCTCCCGGGAGGGGTGGATGGTGAGGGTGCACCAAGTGGCCAACAGCCAGGACCAGGTGTTGGAAGCAGAGCCTCAGTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000362019.7
CDS GCA 72 bp AAACGCACGCATGGACCACTGAATCTCACACACGCTTaGCCCCTCCTCCGCGCCTGCTGTTCCTTCCCCACG +
Preference number: 6 (lower is better)
Translates to: KRTHGPLNLTHA*PLLRACCSFPT
Trigger: CGTGGGGAAGGAACAGCAGGCGCGGAGGAGGGGGCAAGCGTGTGTGAGATTCAGTGGTCCATGCGTGCGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
ENST00000485629.1
CDS GCA 72 bp GGGGCTGCAGGGAGGTCCTCCGCATCAGCAGGCCGCTaGTTCTTCCTGTCCTTTTTCCGCTTCTTCTGGGCT +
Preference number: 6 (lower is better)
Translates to: GAAGRSSASAGR*FFLSFFRFFWA
Trigger: AGCCCAGAAGAAGCGGAAAAAGGACAGGAAGAAGCAGCGGCCTGCTGATGCGGAGGACCTCCCTGCAGCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
ENST00000478330.1
CDS CAA 72 bp CTCTGCTTCCAACACCTGGTCCTGGCTGTTGGCCACTaGGTGCACCCTCACCATCCACCCCTCCCGGGAGAA +
Preference number: 6 (lower is better)
Translates to: LCFQHLVLAVGH*VHPHHPPLPGE
Trigger: TTCTCCCGGGAGGGGTGGATGGTGAGGGTGCACCAAGTGGCCAACAGCCAGGACCAGGTGTTGGAAGCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000362019.7
CDS CAA 90 bp AGCACACGACAAACGCACGCATGGACCACTGAATCTCACACACGCTaGCCCCCTCCTCCGCGCCTGCTGTTCCTTCCCCACGTGAAGAGC +
Preference number: 6 (lower is better)
Translates to: STRQTHAWTTESHTR*PPPPRLLFLPHVKS
Trigger: GCTCTTCACGTGGGGAAGGAACAGCAGGCGCGGAGGAGGGGGCAAGCGTGTGTGAGATTCAGTGGTCCATGCGTGCGTTTGTCGTGTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000362019.7
CDS GCA 72 bp CCTCACCATCCACCCCTCCCGGGAGAAGTGGCCCACTaGTTTCTTCAGGATGTGAGCCTGAGCCAGGGAGAT +
Preference number: 6 (lower is better)
Translates to: PHHPPLPGEVAH*FLQDVSLSQGD
Trigger: ATCTCCCTGGCTCAGGCTCACATCCTGAAGAAAGCAGTGGGCCACTTCTCCCGGGAGGGGTGGATGGTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000362019.7
CDS GCA 72 bp ACACAGGTAACTCTTATCAATGGACTGCCCCGGGGCTaGAGGGAGGTCCTCCGCATCAGCAGGCCGCTGCTT +
Preference number: 6 (lower is better)
Translates to: TQVTLINGLPRG*REVLRISRPLL
Trigger: AAGCAGCGGCCTGCTGATGCGGAGGACCTCCCTGCAGCCCCGGGGCAGTCCATTGATAAGAGTTACCTGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
ENST00000478330.1
CDS CAA 90 bp CTTACACGACAAACGCACGCATGGACCACTGAATCTCACACACGCTaGCCCCCTCCTCCGCGCCTGCTGTTCCTTCCCCACGTGAAGAGC +
Preference number: 6 (lower is better)
Translates to: LTRQTHAWTTESHTR*PPPPRLLFLPHVKS
Trigger: GCTCTTCACGTGGGGAAGGAACAGCAGGCGCGGAGGAGGGGGCAAGCGTGTGTGAGATTCAGTGGTCCATGCGTGCGTTTGTCGTGTAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000367737.9
CDS CAA 90 bp TGGAAACGACAAACGCACGCATGGACCACTGAATCTCACACACGCTaGCCCCCTCCTCCGCGCCTGCTGTTCCTTCCCCACGTGAAGAGC +
Preference number: 6 (lower is better)
Translates to: WKRQTHAWTTESHTR*PPPPRLLFLPHVKS
Trigger: GCTCTTCACGTGGGGAAGGAACAGCAGGCGCGGAGGAGGGGGCAAGCGTGTGTGAGATTCAGTGGTCCATGCGTGCGTTTGTCGTTTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000485629.1
CDS TCA 72 bp AATCACCAGCACACGACAAACGCACGCATGGACCACTaGATCTCACACACGCTTGCCCCCTCCTCCGCGCCT +
Preference number: 6 (lower is better)
Translates to: NHQHTTNARMDH*ISHTLAPSSAP
Trigger: AGGCGCGGAGGAGGGGGCAAGCGTGTGTGAGATTCAGTGGTCCATGCGTGCGTTTGTCGTGTGCTGGTGATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000362019.7
CDS TCA 72 bp AACTCCCTGGAAACGACAAACGCACGCATGGACCACTaGATCTCACACACGCTTGCCCCCTCCTCCGCGCCT +
Preference number: 6 (lower is better)
Translates to: NSLETTNARMDH*ISHTLAPSSAP
Trigger: AGGCGCGGAGGAGGGGGCAAGCGTGTGTGAGATTCAGTGGTCCATGCGTGCGTTTGTCGTTTCCAGGGAGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485629.1
CDS CCA 72 bp CCCCTCCCAGGCTTCCTCAGGGTCCGCTCCAAAGCCTaGGCTGTTTCTAGGAGCTCTGGTGTGGCAAGTTTT +
Preference number: 6 (lower is better)
Translates to: PLPGFLRVRSKA*AVSRSSGVASF
Trigger: AAAACTTGCCACACCAGAGCTCCTAGAAACAGCCCAGGCTTTGGAGCGGACCCTGAGGAAGCCTGGGAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
ENST00000466643.1
CDS CAA 90 bp CATCCCAGCTGGGGCCAGCTCCATGACTCTAGCCGACAGCTCAGCTaGGATGTGGTCCATGCTTTCATACTGCTGACCTCGGTGAAGGGC +
Preference number: 6 (lower is better)
Translates to: HPSWGQLHDSSRQLS*DVVHAFILLTSVKG
Trigger: GCCCTTCACCGAGGTCAGCAGTATGAAAGCATGGACCACATCCAAGCTGAGCTGTCGGCTAGAGTCATGGAGCTGGCCCCAGCTGGGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
ENST00000485629.1
CDS TCA 72 bp AATGACCCTTACACGACAAACGCACGCATGGACCACTaGATCTCACACACGCTTGCCCCCTCCTCCGCGCCT +
Preference number: 6 (lower is better)
Translates to: NDPYTTNARMDH*ISHTLAPSSAP
Trigger: AGGCGCGGAGGAGGGGGCAAGCGTGTGTGAGATTCAGTGGTCCATGCGTGCGTTTGTCGTGTAAGGGTCATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000367737.9
CDS GCA 72 bp GAGGAGCTTGCCCACCACACGCAGGCTCCGGGACACTaGAGTGGGAATTCTTTCCACGGAAAAACAGCCACA +
Preference number: 6 (lower is better)
Translates to: EELAHHTQAPGH*SGNSFHGKTAT
Trigger: TGTGGCTGTTTTTCCGTGGAAAGAATTCCCACTGCAGTGTCCCGGAGCCTGCGTGTGGTGGGCAAGCTCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000367737.9
CDS CCA 72 bp CCACACCCAATCACCAGCACACGACAAACGCACGCATaGACCACTGAATCTCACACACGCTTGCCCCCTCCT +
Preference number: 6 (lower is better)
Translates to: PHPITSTRQTHA*TTESHTRLPPP
Trigger: AGGAGGGGGCAAGCGTGTGTGAGATTCAGTGGTCCATGCGTGCGTTTGTCGTGTGCTGGTGATTGGGTGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000362019.7
CDS CCA 72 bp CGTAGCAAGGCCGTGCTTCTCCTCCTCCTGCCAAGCTaGCGATATAGTCCAGGCCATCTGCAATGTGGACCT +
Preference number: 6 (lower is better)
Translates to: RSKAVLLLLLPS*RYSPGHLQCGP
Trigger: AGGTCCACATTGCAGATGGCCTGGACTATATCGCCAGCTTGGCAGGAGGAGGAGAAGCACGGCCTTGCTACG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
ENST00000466643.1
CDS CCA 72 bp CGGAGCCAAACTCCCTGGAAACGACAAACGCACGCATaGACCACTGAATCTCACACACGCTTGCCCCCTCCT +
Preference number: 6 (lower is better)
Translates to: RSQTPWKRQTHA*TTESHTRLPPP
Trigger: AGGAGGGGGCAAGCGTGTGTGAGATTCAGTGGTCCATGCGTGCGTTTGTCGTTTCCAGGGAGTTTGGCTCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000485629.1
CDS CCA 72 bp AGGACAGCATCCAGGGTGCCCTTGTCCAACACCACCTaGAACGAGGCATCAGGAAACTCCATCTGCGTCATG +
Preference number: 6 (lower is better)
Translates to: RTASRVPLSNTT*NEASGNSICVM
Trigger: CATGACGCAGATGGAGTTTCCTGATGCCTCGTTCCAGGTGGTGTTGGACAAGGGCACCCTGGATGCTGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
ENST00000485629.1
CDS CCA 72 bp ACCCCAGGAATGACCCTTACACGACAAACGCACGCATaGACCACTGAATCTCACACACGCTTGCCCCCTCCT +
Preference number: 6 (lower is better)
Translates to: TPGMTLTRQTHA*TTESHTRLPPP
Trigger: AGGAGGGGGCAAGCGTGTGTGAGATTCAGTGGTCCATGCGTGCGTTTGTCGTGTAAGGGTCATTCCTGGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000367737.9
CDS GCA 72 bp TCTTCTCTTCCTCATCTGTCAGGACAGCATCCAGGGTaGCCTTGTCCAACACCACCTGGAACGAGGCATCAG +
Preference number: 6 (lower is better)
Translates to: SSLPHLSGQHPG*PCPTPPGTRHQ
Trigger: CTGATGCCTCGTTCCAGGTGGTGTTGGACAAGGGCACCCTGGATGCTGTCCTGACAGATGAGGAAGAGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
ENST00000485629.1
CDS GCA 72 bp GATGAAGGCAAAGACAGGCAAGGAGAACTGAGGCTCTaGTTCCAACACCTGGTCCTGGCTGTTGGCCACTTG +
Preference number: 6 (lower is better)
Translates to: DEGKDRQGELRL*FQHLVLAVGHL
Trigger: CAAGTGGCCAACAGCCAGGACCAGGTGTTGGAAGCAGAGCCTCAGTTCTCCTTGCCTGTCTTTGCCTTCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000362019.7
CDS CCA 72 bp AAATCGCAAAATGATTGTCCCGCGATGGTTTCACAGTaGGGCTGTCCACCACGTGGAGGGTGTAGCGTGGCT +
Preference number: 6 (lower is better)
Translates to: KSQNDCPAMVSQ*GCPPRGGCSVA
Trigger: AGCCACGCTACACCCTCCACGTGGTGGACAGCCCCACTGTGAAACCATCGCGGGACAATCATTTTGCGATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000361735.4
ENST00000362019.7
CDS CAA 90 bp AAGGTCTTCTCTTCCTCATCTGTCAGGACAGCATCCAGGGTGCCCTaGTCCAACACCACCTGGAACGAGGCATCAGGAAACTCCATCTGC +
Preference number: 6 (lower is better)
Translates to: KVFSSSSVRTASRVP*SNTTWNEASGNSIC
Trigger: GCAGATGGAGTTTCCTGATGCCTCGTTCCAGGTGGTGTTGGACAAGGGCACCCTGGATGCTGTCCTGACAGATGAGGAAGAGAAGACCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
ENST00000485629.1
CDS GCA 72 bp TCCTCCTGCCAAGCTGGCGATATAGTCCAGGCCATCTaGAATGTGGACCTTCATTCGGTCACTCTGGGAGAA +
Preference number: 6 (lower is better)
Translates to: SSCQAGDIVQAI*NVDLHSVTLGE
Trigger: TTCTCCCAGAGTGACCGAATGAAGGTCCACATTGCAGATGGCCTGGACTATATCGCCAGCTTGGCAGGAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
ENST00000466643.1
CDS CCA 72 bp GCTCCAAAGCCTGGGCTGTTTCTAGGAGCTCTGGTGTaGCAAGTTTTTGCTCAGGGTGCAGCTGACAGAACA +
Preference number: 6 (lower is better)
Translates to: APKPGLFLGALV*QVFAQGAADRT
Trigger: TGTTCTGTCAGCTGCACCCTGAGCAAAAACTTGCCACACCAGAGCTCCTAGAAACAGCCCAGGCTTTGGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
ENST00000466643.1
CDS CCA 72 bp TGGGAGTCCAAGGTCAGTCTAGGCAGGAGGGCTGCTTaGCCTAAGCAGTCACACAATTTTCACCGTCTTGAG +
Preference number: 6 (lower is better)
Translates to: WESKVSLGRRAA*PKQSHNFHRLE
Trigger: CTCAAGACGGTGAAAATTGTGTGACTGCTTAGGCCAAGCAGCCCTCCTGCCTAGACTGACCTTGGACTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
ENST00000466643.1
CDS CAA 90 bp GTTGCTGAGGAAGATCAGTCGACGGAAGTATCGCTTGTCATCCCCTaGCACATCCTCAATGACATAGTCACCGCTCAAGGGGCTGCAGTC +
Preference number: 6 (lower is better)
Translates to: VAEEDQSTEVSLVIP*HILNDIVTAQGAAV
Trigger: GACTGCAGCCCCTTGAGCGGTGACTATGTCATTGAGGATGTGCAAGGGGATGACAAGCGATACTTCCGTCGACTGATCTTCCTCAGCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS CAA 90 bp GACACATCCTTCAGCAACCTGGCTTCGGACTGCACCACATTCCTGTaGCTGAGGAAGATCAGTCGACGGAAGTATCGCTTGTCATCCCCT +
Preference number: 6 (lower is better)
Translates to: DTSFSNLASDCTTFL*LRKISRRKYRLSSP
Trigger: AGGGGATGACAAGCGATACTTCCGTCGACTGATCTTCCTCAGCAACAGGAATGTGGTGCAGTCCGAAGCCAGGTTGCTGAAGGATGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
ENST00000478330.1
CDS TCA 72 bp GGAAGTATCGCTTGTCATCCCCTTGCACATCCTCAATaGCATAGTCACCGCTCAAGGGGCTGCAGTCTTGGT +
Preference number: 6 (lower is better)
Translates to: GSIACHPLAHPQ*HSHRSRGCSLG
Trigger: ACCAAGACTGCAGCCCCTTGAGCGGTGACTATGTCATTGAGGATGTGCAAGGGGATGACAAGCGATACTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
CDS TCA 72 bp GCAACCTGGCTTCGGACTGCACCACATTCCTGTTGCTaGGGAAGATCAGTCGACGGAAGTATCGCTTGTCAT +
Preference number: 6 (lower is better)
Translates to: ATWLRTAPHSCC*GRSVDGSIACH
Trigger: ATGACAAGCGATACTTCCGTCGACTGATCTTCCTCAGCAACAGGAATGTGGTGCAGTCCGAAGCCAGGTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
ENST00000478330.1
CDS GCA 72 bp AACACCACCTGGAACGAGGCATCAGGAAACTCCATCTaGGTCATGTCCATCTTCAAGAAGCTCATCTGGGGC +
Preference number: 6 (lower is better)
Translates to: NTTWNEASGNSI*VMSIFKKLIWG
Trigger: GCCCCAGATGAGCTTCTTGAAGATGGACATGACGCAGATGGAGTTTCCTGATGCCTCGTTCCAGGTGGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
ENST00000485629.1
CDS CAA 72 bp TTCAGCAACCTGGCTTCGGACTGCACCACATTCCTGTaGCTGAGGAAGATCAGTCGACGGAAGTATCGCTTG +
Preference number: 6 (lower is better)
Translates to: FSNLASDCTTFL*LRKISRRKYRL
Trigger: CAAGCGATACTTCCGTCGACTGATCTTCCTCAGCAACAGGAATGTGGTGCAGTCCGAAGCCAGGTTGCTGAA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
ENST00000478330.1
CDS CAA 72 bp TGGAGGGATCGATCTCCACAGCATCAATGCAGGACTTaGGAAAATGATCGTGGACAAAGAGGGGGAGGCTGC +
Preference number: 6 (lower is better)
Translates to: WRDRSPQHQCRT*ENDRGQRGGGC
Trigger: GCAGCCTCCCCCTCTTTGTCCACGATCATTTTCCAAAGTCCTGCATTGATGCTGTGGAGATCGATCCCTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
ENST00000466643.1
CDS CAA 90 bp GCAGGAGGGCTGCTTGGCCTAAGCAGTCACACAATTTTCACCGTCTaGAGCATATCTGACAAGACATACGTGTCATCCCAACCCCTCCCA +
Preference number: 6 (lower is better)
Translates to: AGGLLGLSSHTIFTV*SISDKTYVSSQPLP
Trigger: TGGGAGGGGTTGGGATGACACGTATGTCTTGTCAGATATGCTCAAGACGGTGAAAATTGTGTGACTGCTTAGGCCAAGCAGCCCTCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
ENST00000466643.1
CDS CCA 72 bp TCCATCTGCGTCATGTCCATCTTCAAGAAGCTCATCTaGGGCCGTCGGGTGGCATTACATTCCTTCATTTGC +
Preference number: 6 (lower is better)
Translates to: SICVMSIFKKLI*GRRVALHSFIC
Trigger: GCAAATGAAGGAATGTAATGCCACCCGACGGCCCCAGATGAGCTTCTTGAAGATGGACATGACGCAGATGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
ENST00000485629.1
CDS TCA 72 bp CCAGTGTTGGGTCCTTACTGTCAACATCAAACATTATaGCATCGTAGCAAGGCCGTGCTTCTCCTCCTCCTG +
Preference number: 6 (lower is better)
Translates to: PVLGPYCQHQTL*HRSKAVLLLLL
Trigger: CAGGAGGAGGAGAAGCACGGCCTTGCTACGATGTCATAATGTTTGATGTTGACAGTAAGGACCCAACACTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
ENST00000466643.1
CDS TCA 72 bp AGCTCTGGTGTGGCAAGTTTTTGCTCAGGGTGCAGCTaGCAGAACAGGATCTCATTCACTTCACCCTCAATT +
Preference number: 6 (lower is better)
Translates to: SSGVASFCSGCS*QNRISFTSPSI
Trigger: AATTGAGGGTGAAGTGAATGAGATCCTGTTCTGTCAGCTGCACCCTGAGCAAAAACTTGCCACACCAGAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
ENST00000466643.1
CDS TCA 72 bp AAGCAGTCACACAATTTTCACCGTCTTGAGCATATCTaGCAAGACATACGTGTCATCCCAACCCCTCCCAGG +
Preference number: 6 (lower is better)
Translates to: KQSHNFHRLEHI*QDIRVIPTPPR
Trigger: CCTGGGAGGGGTTGGGATGACACGTATGTCTTGTCAGATATGCTCAAGACGGTGAAAATTGTGTGACTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
ENST00000466643.1
CDS GCA 72 bp ATCTGGGGCCGTCGGGTGGCATTACATTCCTTCATTTaGTTGATGACAACCTCACTGATGTCGATGTTCACT +
Preference number: 6 (lower is better)
Translates to: IWGRRVALHSFI*LMTTSLMSMFT
Trigger: AGTGAACATCGACATCAGTGAGGTTGTCATCAAGCAAATGAAGGAATGTAATGCCACCCGACGGCCCCAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
ENST00000485629.1
CDS GCA 72 bp CTTCCAACATGGAGGGATCGATCTCCACAGCATCAATaGAGGACTTTGGAAAATGATCGTGGACAAAGAGGG +
Preference number: 6 (lower is better)
Translates to: LPTWRDRSPQHQ*RTLENDRGQRG
Trigger: CCCTCTTTGTCCACGATCATTTTCCAAAGTCCTGCATTGATGCTGTGGAGATCGATCCCTCCATGTTGGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
ENST00000466643.1
CDS CAA 72 bp TGGGGCCGTCGGGTGGCATTACATTCCTTCATTTGCTaGATGACAACCTCACTGATGTCGATGTTCACTATA +
Preference number: 6 (lower is better)
Translates to: WGRRVALHSFIC*MTTSLMSMFTI
Trigger: TATAGTGAACATCGACATCAGTGAGGTTGTCATCAAGCAAATGAAGGAATGTAATGCCACCCGACGGCCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
ENST00000485629.1
CDS CAA 72 bp CTGCTTGGCCTAAGCAGTCACACAATTTTCACCGTCTaGAGCATATCTGACAAGACATACGTGTCATCCCAA +
Preference number: 6 (lower is better)
Translates to: LLGLSSHTIFTV*SISDKTYVSSQ
Trigger: TTGGGATGACACGTATGTCTTGTCAGATATGCTCAAGACGGTGAAAATTGTGTGACTGCTTAGGCCAAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000361735.4
ENST00000362019.7
ENST00000367737.9
ENST00000466643.1
CDS TCA 72 bp CAGCTTGTAATTGCTGTTCTTCAACTACAATGCAAGTaGCACCAATTGTTTAGGTCTGTAATCTTTATGCTC +
Preference number: 6 (lower is better)
Translates to: QLVIAVLQLQCK*HQLFRSVIFML
Trigger: GAGCATAAAGATTACAGACCTAAACAATTGGTGTCACTTGCATTGTAGTTGAAGAACAGCAATTACAAGCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478330.1