Pregenerated sensors for EDRF1-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000224023Ensembl transcript IDs: ENST00000419400.1, ENST00000423178.6, ENST00000525909.1, ENST00000527483.5, ENST00000528844.1, ENST00000531977.1
Found 54 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GCCAACAAAGACATGCAGGGGGCGGAGCCTGAGCGTCAGATACCGTaGGCGGCGTGCAGAGGGCGGAGCCTAGGAGTCAGATACCGCGAG | + |
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Preference number: 5 (lower is better) Translates to: ANKDMQGAEPERQIP*AACRGRSLGVRYRE Trigger: CTCGCGGTATCTGACTCCTAGGCTCCGCCCTCTGCACGCCGCTCACGGTATCTGACGCTCAGGCTCCGCCCCCTGCATGTCTTTGTTGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000423178.6 ENST00000528844.1 |
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| CDS GCA 90 bp | CCTGCAGGATCGGACGACCCCCAGAACTGTTTGCCAACAAAGACATaGAGGGGGCGGAGCCTGAGCGTCAGATACCGTGAGCGGCGTGCA | + |
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Preference number: 5 (lower is better) Translates to: PAGSDDPQNCLPTKT*RGRSLSVRYRERRA Trigger: TGCACGCCGCTCACGGTATCTGACGCTCAGGCTCCGCCCCCTGCATGTCTTTGTTGGCAAACAGTTCTGGGGGTCGTCCGATCCTGCAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000423178.6 |
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| CDS GCA 90 bp | TCTGCAGGATCGGACGACCCCCAGAACTGTTTGCCAACAAAGACATaGAGGGGGCGGAGCCTGAGCGTCAGATACCGTGAGCGGCGTGCA | + |
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Preference number: 5 (lower is better) Translates to: SAGSDDPQNCLPTKT*RGRSLSVRYRERRA Trigger: TGCACGCCGCTCACGGTATCTGACGCTCAGGCTCCGCCCCCTGCATGTCTTTGTTGGCAAACAGTTCTGGGGGTCGTCCGATCCTGCAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000528844.1 |
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| CDS GCA 90 bp | CTGCGTGGTGGAGGCCAGTGCAGACCATCCTCTGCCCAGAAGAGTTaGATTCTAAATGACCCCTCAGAGAGCCCTCTGGATGGCCGCCTC | + |
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Preference number: 5 (lower is better) Translates to: LRGGGQCRPSSAQKS*ILNDPSESPLDGRL Trigger: GAGGCGGCCATCCAGAGGGCTCTCTGAGGGGTCATTTAGAATGCAACTCTTCTGGGCAGAGGATGGTCTGCACTGGCCTCCACCACGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000419400.1 ENST00000423178.6 ENST00000527483.5 |
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| CDS TCA 90 bp | AGGCCAGTGCAGACCATCCTCTGCCCAGAAGAGTTGCATTCTAAATaGCCCCTCAGAGAGCCCTCTGGATGGCCGCCTCTCCCACAGGTC | + |
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Preference number: 5 (lower is better) Translates to: RPVQTILCPEELHSK*PLREPSGWPPLPQV Trigger: GACCTGTGGGAGAGGCGGCCATCCAGAGGGCTCTCTGAGGGGTCATTTAGAATGCAACTCTTCTGGGCAGAGGATGGTCTGCACTGGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000419400.1 ENST00000423178.6 ENST00000527483.5 |
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| CDS CCA 90 bp | AGGCAGGAGGATCACTTCAGCCGAGGAAGGAGTTCAAGTCCAGCCTaGACGGTCTCTGCAGGATCGGACGACCCCCAGAACTGTTTGCCA | + |
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Preference number: 5 (lower is better) Translates to: RQEDHFSRGRSSSPA*TVSAGSDDPQNCLP Trigger: TGGCAAACAGTTCTGGGGGTCGTCCGATCCTGCAGAGACCGTCCAGGCTGGACTTGAACTCCTTCCTCGGCTGAAGTGATCCTCCTGCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000527483.5 ENST00000528844.1 |
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| CDS CCA 90 bp | TGCCCACACCTCACAGAAGCCATGTTAGTGGACATTTCTCCACTCTaGAAGCCTTCCTGCGTGGTGGAGGCCAGTGCAGACCATCCTCTG | + |
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Preference number: 5 (lower is better) Translates to: CPHLTEAMLVDISPL*KPSCVVEASADHPL Trigger: CAGAGGATGGTCTGCACTGGCCTCCACCACGCAGGAAGGCTTCCAGAGTGGAGAAATGTCCACTAACATGGCTTCTGTGAGGTGTGGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423178.6 |
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| CDS TCA 90 bp | ATGACGCAGCCTGAAACCTCTCACCAGAAGCTAGAGCCATGTGCTTaGACTTCCCAGCCTGCAGGATCGGACGACCCCCAGAACTGTTTG | + |
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Preference number: 5 (lower is better) Translates to: MTQPETSHQKLEPCA*TSQPAGSDDPQNCL Trigger: CAAACAGTTCTGGGGGTCGTCCGATCCTGCAGGCTGGGAAGTTCAAGCACATGGCTCTAGCTTCTGGTGAGAGGTTTCAGGCTGCGTCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000423178.6 |
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| CDS GCA 90 bp | TCACTTCAGCCGAGGAAGGAGTTCAAGTCCAGCCTGGACGGTCTCTaGAGGATCGGACGACCCCCAGAACTGTTTGCCAACAAAGACATG | + |
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Preference number: 5 (lower is better) Translates to: SLQPRKEFKSSLDGL*RIGRPPELFANKDM Trigger: CATGTCTTTGTTGGCAAACAGTTCTGGGGGTCGTCCGATCCTGCAGAGACCGTCCAGGCTGGACTTGAACTCCTTCCTCGGCTGAAGTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000528844.1 |
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| CDS CCA 90 bp | GCACATGACCTCACAGAAGCCATGTTAGTGGACATTTCTCCACTCTaGAAGCCTTCCTGCGTGGTGGAGGCCAGTGCAGACCATCCTCTG | + |
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Preference number: 5 (lower is better) Translates to: AHDLTEAMLVDISPL*KPSCVVEASADHPL Trigger: CAGAGGATGGTCTGCACTGGCCTCCACCACGCAGGAAGGCTTCCAGAGTGGAGAAATGTCCACTAACATGGCTTCTGTGAGGTCATGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000419400.1 |
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| CDS GCA 90 bp | ACAGAAGCCATGTTAGTGGACATTTCTCCACTCTGGAAGCCTTCCTaGGTGGTGGAGGCCAGTGCAGACCATCCTCTGCCCAGAAGAGTT | + |
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Preference number: 5 (lower is better) Translates to: TEAMLVDISPLWKPS*VVEASADHPLPRRV Trigger: AACTCTTCTGGGCAGAGGATGGTCTGCACTGGCCTCCACCACGCAGGAAGGCTTCCAGAGTGGAGAAATGTCCACTAACATGGCTTCTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000419400.1 ENST00000423178.6 ENST00000527483.5 |
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| CDS TCA 90 bp | GGTTTCCAAGTCCCTCTCCAATGCCTCAGGCTTCACGACCCTTCCTaGTCCTCTTCCACTGTTACCATTCCCAGCCCAGTGTGTTTGTCA | + |
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Preference number: 5 (lower is better) Translates to: GFQVPLQCLRLHDPS*SSSTVTIPSPVCLS Trigger: TGACAAACACACTGGGCTGGGAATGGTAACAGTGGAAGAGGATCAGGAAGGGTCGTGAAGCCTGAGGCATTGGAGAGGGACTTGGAAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423178.6 |
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| CDS GCA 90 bp | AACCTCTCACCAGAAGCTAGAGCCATGTGCTTGAACTTCCCAGCCTaGAGGATCGGACGACCCCCAGAACTGTTTGCCAACAAAGACATG | + |
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Preference number: 5 (lower is better) Translates to: NLSPEARAMCLNFPA*RIGRPPELFANKDM Trigger: CATGTCTTTGTTGGCAAACAGTTCTGGGGGTCGTCCGATCCTGCAGGCTGGGAAGTTCAAGCACATGGCTCTAGCTTCTGGTGAGAGGTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000423178.6 |
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| CDS TCA 90 bp | ATAATGACATCTGTGGATTCTGGCTCCACTTCCTATTCAGGACGCTaGGGCAGGAGGATCACTTCAGCCGAGGAAGGAGTTCAAGTCCAG | + |
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Preference number: 5 (lower is better) Translates to: IMTSVDSGSTSYSGR*GRRITSAEEGVQVQ Trigger: CTGGACTTGAACTCCTTCCTCGGCTGAAGTGATCCTCCTGCCTCAGCGTCCTGAATAGGAAGTGGAGCCAGAATCCACAGATGTCATTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000423178.6 ENST00000527483.5 ENST00000528844.1 |
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| CDS GCA 90 bp | CAGCCGAGGAAGGAGTTCAAGTCCAGCCTGGACGGTCTCTGGTTTTaGCTTTCTTCACACATGTCCATTTACCCATTGATCTTCTCTGCC | + |
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Preference number: 5 (lower is better) Translates to: QPRKEFKSSLDGLWF*LSSHMSIYPLIFSA Trigger: GGCAGAGAAGATCAATGGGTAAATGGACATGTGTGAAGAAAGGCAAAACCAGAGACCGTCCAGGCTGGACTTGAACTCCTTCCTCGGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000423178.6 |
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| CDS CCA 90 bp | TCACTTCAGCCGAGGAAGGAGTTCAAGTCCAGCCTGGACGGTCTCTaGTTTTGCCTTTCTTCACACATGTCCATTTACCCATTGATCTTC | + |
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Preference number: 5 (lower is better) Translates to: SLQPRKEFKSSLDGL*FCLSSHMSIYPLIF Trigger: GAAGATCAATGGGTAAATGGACATGTGTGAAGAAAGGCAAAACCAGAGACCGTCCAGGCTGGACTTGAACTCCTTCCTCGGCTGAAGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000423178.6 |
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| CDS CCA 90 bp | GACTCTCCAACAGGAGAGCTTGAGTTTCCCTTCTCACTCTTGTGCTaGGTGTCCTTTTCCTACCTCCAGACCATCACAAGGATATCTGTA | + |
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Preference number: 5 (lower is better) Translates to: DSPTGELEFPFSLLC*VSFSYLQTITRISV Trigger: TACAGATATCCTTGTGATGGTCTGGAGGTAGGAAAAGGACACCCAGCACAAGAGTGAGAAGGGAAACTCAAGCTCTCCTGTTGGAGAGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000525909.1 ENST00000528844.1 |
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| CDS TCA 90 bp | CGCACACCCAGAACTAGAGCACTGAACCCTGTAGGCCAGAAACCATaGTTGACTGATATGTTGAATCCAGCACTAAGCCTAGGACTCAAT | + |
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Preference number: 5 (lower is better) Translates to: RTPRTRALNPVGQKP*LTDMLNPALSLGLN Trigger: ATTGAGTCCTAGGCTTAGTGCTGGATTCAACATATCAGTCAATCATGGTTTCTGGCCTACAGGGTTCAGTGCTCTAGTTCTGGGTGTGCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423178.6 |
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| CDS CCA 90 bp | ACTCAGATCTTTCACCCGTATAATGCCACTCCAGGCTCTGCCTCTTaGGTAGTGTCCTATGTCCTAGAATATTCCCAGATGAGAATGGGA | + |
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Preference number: 5 (lower is better) Translates to: TQIFHPYNATPGSAS*VVSYVLEYSQMRMG Trigger: TCCCATTCTCATCTGGGAATATTCTAGGACATAGGACACTACCCAAGAGGCAGAGCCTGGAGTGGCATTATACGGGTGAAAGATCTGAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423178.6 |
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| CDS CCA 90 bp | AAATGCAATATTCTTGCCTTCTGGGTAGTAAACAAAGTGTGCAGATaGATAATGACATCTGTGGATTCTGGCTCCACTTCCGTGAGCGGC | + |
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Preference number: 5 (lower is better) Translates to: KCNILAFWVVNKVCR*IMTSVDSGSTSVSG Trigger: GCCGCTCACGGAAGTGGAGCCAGAATCCACAGATGTCATTATCCATCTGCACACTTTGTTTACTACCCAGAAGGCAAGAATATTGCATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525909.1 |
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| CDS CCA 90 bp | GGAAGCAAGGCTTTGAATGGGACTTTCACTCGGGGTAAACATGAGTaGTCGGAGCTTCCCAAGTCATTTGTGATAAGAAAGAACAAAAGT | + |
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Preference number: 5 (lower is better) Translates to: GSKALNGTFTRGKHE*SELPKSFVIRKNKS Trigger: ACTTTTGTTCTTTCTTATCACAAATGACTTGGGAAGCTCCGACCACTCATGTTTACCCCGAGTGAAAGTCCCATTCAAAGCCTTGCTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000423178.6 ENST00000525909.1 ENST00000527483.5 ENST00000528844.1 |
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| CDS TCA 90 bp | AACCCACACCAATTATGTCCAATCAGTTTTATGGATAAAGAAGCCTaGGACTCTCCAACAGGAGAGCTTGAGTTTCCCTTCTCACTCTTG | + |
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Preference number: 5 (lower is better) Translates to: NPHQLCPISFMDKEA*DSPTGELEFPFSLL Trigger: CAAGAGTGAGAAGGGAAACTCAAGCTCTCCTGTTGGAGAGTCTCAGGCTTCTTTATCCATAAAACTGATTGGACATAATTGGTGTGGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528844.1 |
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| CDS GCA 90 bp | CTTTTAAAATGCAATATTCTTGCCTTCTGGGTAGTAAACAAAGTGTaGAGATGGATAATGACATCTGTGGATTCTGGCTCCACTTCCGTG | + |
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Preference number: 5 (lower is better) Translates to: LLKCNILAFWVVNKV*RWIMTSVDSGSTSV Trigger: CACGGAAGTGGAGCCAGAATCCACAGATGTCATTATCCATCTGCACACTTTGTTTACTACCCAGAAGGCAAGAATATTGCATTTTAAAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000525909.1 |
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| CDS CCA 90 bp | AAATGCAATATTCTTGCCTTCTGGGTAGTAAACAAAGTGTGCAGATaGATAATGACATCTGTGGATTCTGGCTCCACTTCCTATTCAGGA | + |
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Preference number: 5 (lower is better) Translates to: KCNILAFWVVNKVCR*IMTSVDSGSTSYSG Trigger: TCCTGAATAGGAAGTGGAGCCAGAATCCACAGATGTCATTATCCATCTGCACACTTTGTTTACTACCCAGAAGGCAAGAATATTGCATTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000423178.6 ENST00000527483.5 ENST00000528844.1 |
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| CDS GCA 90 bp | CTTTTAAAATGCAATATTCTTGCCTTCTGGGTAGTAAACAAAGTGTaGAGATGGATAATGACATCTGTGGATTCTGGCTCCACTTCCTAT | + |
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Preference number: 5 (lower is better) Translates to: LLKCNILAFWVVNKV*RWIMTSVDSGSTSY Trigger: ATAGGAAGTGGAGCCAGAATCCACAGATGTCATTATCCATCTGCACACTTTGTTTACTACCCAGAAGGCAAGAATATTGCATTTTAAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000423178.6 ENST00000527483.5 ENST00000528844.1 |
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| CDS CAA 72 bp | TCCCAGCCTGCAGGATCGGACGACCCCCAGAACTGTTaGCCAACAAAGACATGCAGGGGGCGGAGCCTGAGC | + |
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Preference number: 6 (lower is better) Translates to: SQPAGSDDPQNC*PTKTCRGRSLS Trigger: GCTCAGGCTCCGCCCCCTGCATGTCTTTGTTGGCAAACAGTTCTGGGGGTCGTCCGATCCTGCAGGCTGGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000423178.6 |
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| CDS CAA 90 bp | CCAGCCTGGACGGTCTCTGCAGGATCGGACGACCCCCAGAACTGTTaGCCAACAAAGACATGCAGGGGGCGGAGCCTGAGCGTCAGATAC | + |
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Preference number: 6 (lower is better) Translates to: PAWTVSAGSDDPQNC*PTKTCRGRSLSVRY Trigger: GTATCTGACGCTCAGGCTCCGCCCCCTGCATGTCTTTGTTGGCAAACAGTTCTGGGGGTCGTCCGATCCTGCAGAGACCGTCCAGGCTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000528844.1 |
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| CDS CAA 72 bp | ACGGTCTCTGCAGGATCGGACGACCCCCAGAACTGTTaGCCAACAAAGACATGCAGGGGGCGGAGCCTGAGC | + |
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Preference number: 6 (lower is better) Translates to: TVSAGSDDPQNC*PTKTCRGRSLS Trigger: GCTCAGGCTCCGCCCCCTGCATGTCTTTGTTGGCAAACAGTTCTGGGGGTCGTCCGATCCTGCAGAGACCGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000528844.1 |
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| CDS CAA 90 bp | GCTGCTAGGCTCGCCTGTCCCCCACTGCCATTCCCACCTGCACACTaGAGTGTTTTGCAGTCACCGTCCCACTGTCTGCCCAGGTTTCCA | + |
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Preference number: 6 (lower is better) Translates to: AARLACPPLPFPPAH*SVLQSPSHCLPRFP Trigger: TGGAAACCTGGGCAGACAGTGGGACGGTGACTGCAAAACACTCAAGTGTGCAGGTGGGAATGGCAGTGGGGGACAGGCGAGCCTAGCAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000423178.6 |
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| CDS GCA 72 bp | CCGAGGAAGGAGTTCAAGTCCAGCCTGGACGGTCTCTaGAGGATCGGACGACCCCCAGAACTGTTTGCCAAC | + |
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Preference number: 6 (lower is better) Translates to: PRKEFKSSLDGL*RIGRPPELFAN Trigger: GTTGGCAAACAGTTCTGGGGGTCGTCCGATCCTGCAGAGACCGTCCAGGCTGGACTTGAACTCCTTCCTCGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000527483.5 ENST00000528844.1 |
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| CDS CCA 72 bp | GATCACTTCAGCCGAGGAAGGAGTTCAAGTCCAGCCTaGACGGTCTCTGCAGGATCGGACGACCCCCAGAAC | + |
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Preference number: 6 (lower is better) Translates to: DHFSRGRSSSPA*TVSAGSDDPQN Trigger: GTTCTGGGGGTCGTCCGATCCTGCAGAGACCGTCCAGGCTGGACTTGAACTCCTTCCTCGGCTGAAGTGATC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000527483.5 ENST00000528844.1 ENST00000531977.1 |
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| CDS TCA 72 bp | CCTGAAACCTCTCACCAGAAGCTAGAGCCATGTGCTTaGACTTCCCAGCCTGCAGGATCGGACGACCCCCAG | + |
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Preference number: 6 (lower is better) Translates to: PETSHQKLEPCA*TSQPAGSDDPQ Trigger: CTGGGGGTCGTCCGATCCTGCAGGCTGGGAAGTTCAAGCACATGGCTCTAGCTTCTGGTGAGAGGTTTCAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000423178.6 |
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| CDS TCA 72 bp | CAGACCATCCTCTGCCCAGAAGAGTTGCATTCTAAATaGCCCCTCAGAGAGCCCTCTGGATGGCCGCCTCTC | + |
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Preference number: 6 (lower is better) Translates to: QTILCPEELHSK*PLREPSGWPPL Trigger: GAGAGGCGGCCATCCAGAGGGCTCTCTGAGGGGTCATTTAGAATGCAACTCTTCTGGGCAGAGGATGGTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000419400.1 ENST00000423178.6 ENST00000527483.5 |
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| CDS TCA 72 bp | GTCCCTCTCCAATGCCTCAGGCTTCACGACCCTTCCTaGTCCTCTTCCACTGTTACCATTCCCAGCCCAGTG | + |
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Preference number: 6 (lower is better) Translates to: VPLQCLRLHDPS*SSSTVTIPSPV Trigger: CACTGGGCTGGGAATGGTAACAGTGGAAGAGGATCAGGAAGGGTCGTGAAGCCTGAGGCATTGGAGAGGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423178.6 |
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| CDS GCA 72 bp | ATGTTAGTGGACATTTCTCCACTCTGGAAGCCTTCCTaGGTGGTGGAGGCCAGTGCAGACCATCCTCTGCCC | + |
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Preference number: 6 (lower is better) Translates to: MLVDISPLWKPS*VVEASADHPLP Trigger: GGGCAGAGGATGGTCTGCACTGGCCTCCACCACGCAGGAAGGCTTCCAGAGTGGAGAAATGTCCACTAACAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000419400.1 ENST00000423178.6 ENST00000527483.5 |
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| CDS GCA 72 bp | CCAGAAGCTAGAGCCATGTGCTTGAACTTCCCAGCCTaGAGGATCGGACGACCCCCAGAACTGTTTGCCAAC | + |
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Preference number: 6 (lower is better) Translates to: PEARAMCLNFPA*RIGRPPELFAN Trigger: GTTGGCAAACAGTTCTGGGGGTCGTCCGATCCTGCAGGCTGGGAAGTTCAAGCACATGGCTCTAGCTTCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000423178.6 |
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| CDS CCA 72 bp | CTCACAGAAGCCATGTTAGTGGACATTTCTCCACTCTaGAAGCCTTCCTGCGTGGTGGAGGCCAGTGCAGAC | + |
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Preference number: 6 (lower is better) Translates to: LTEAMLVDISPL*KPSCVVEASAD Trigger: GTCTGCACTGGCCTCCACCACGCAGGAAGGCTTCCAGAGTGGAGAAATGTCCACTAACATGGCTTCTGTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000419400.1 ENST00000423178.6 ENST00000527483.5 |
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| CDS CAA 72 bp | CCTTCCCAACACCTCCCCCAGAGCTCAGAGGAACTTTaGTCATTTACTCCTACACACCTCATCCCCGCCTTC | + |
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Preference number: 6 (lower is better) Translates to: PSQHLPQSSEEL*SFTPTHLIPAF Trigger: GAAGGCGGGGATGAGGTGTGTAGGAGTAAATGACAAAAGTTCCTCTGAGCTCTGGGGGAGGTGTTGGGAAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000531977.1 |
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| CDS TCA 72 bp | TTCCTTTCCCTGTGGCCACATTCTGCCTTTCCTGAGTaGATACTTGCTGTGGTCCTCGTCGCACACCCAGAA | + |
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Preference number: 6 (lower is better) Translates to: FLSLWPHSAFPE*ILAVVLVAHPE Trigger: TTCTGGGTGTGCGACGAGGACCACAGCAAGTATTCACTCAGGAAAGGCAGAATGTGGCCACAGGGAAAGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423178.6 |
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| CDS TCA 72 bp | GTGACTCACAGTTGTAGTCCTACCTATTCAGGACGCTaGGGCAGGAGGATCACTTCAGCCGAGGAAGGAGTT | + |
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Preference number: 6 (lower is better) Translates to: VTHSCSPTYSGR*GRRITSAEEGV Trigger: AACTCCTTCCTCGGCTGAAGTGATCCTCCTGCCTCAGCGTCCTGAATAGGTAGGACTACAACTGTGAGTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000531977.1 |
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| CDS CCA 72 bp | CCGAGGAAGGAGTTCAAGTCCAGCCTGGACGGTCTCTaGTTTTGCCTTTCTTCACACATGTCCATTTACCCA | + |
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Preference number: 6 (lower is better) Translates to: PRKEFKSSLDGL*FCLSSHMSIYP Trigger: TGGGTAAATGGACATGTGTGAAGAAAGGCAAAACCAGAGACCGTCCAGGCTGGACTTGAACTCCTTCCTCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000423178.6 |
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| CDS CAA 72 bp | TCCTCTTCCACTGTTACCATTCCCAGCCCAGTGTGTTaGTCATGCCTTGTAACCTCCACCACACCTTGTACC | + |
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Preference number: 6 (lower is better) Translates to: SSSTVTIPSPVC*SCLVTSTTPCT Trigger: GGTACAAGGTGTGGTGGAGGTTACAAGGCATGACAAACACACTGGGCTGGGAATGGTAACAGTGGAAGAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423178.6 |
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| CDS CAA 90 bp | TCAGCCGAGGAAGGAGTTCAAGTCCAGCCTGGACGGTCTCTGGTTTaGCCTTTCTTCACACATGTCCATTTACCCATTGATCTTCTCTGC | + |
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Preference number: 6 (lower is better) Translates to: SAEEGVQVQPGRSLV*PFFTHVHLPIDLLC Trigger: GCAGAGAAGATCAATGGGTAAATGGACATGTGTGAAGAAAGGCAAAACCAGAGACCGTCCAGGCTGGACTTGAACTCCTTCCTCGGCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423178.6 |
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| CDS GCA 72 bp | TCCACTGTTACCATTCCCAGCCCAGTGTGTTTGTCATaGCTTGTAACCTCCACCACACCTTGTACCTTTCCT | + |
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Preference number: 6 (lower is better) Translates to: STVTIPSPVCLS*LVTSTTPCTFP Trigger: AGGAAAGGTACAAGGTGTGGTGGAGGTTACAAGGCATGACAAACACACTGGGCTGGGAATGGTAACAGTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423178.6 |
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| CDS CCA 72 bp | CAAAGTGTGCAGATGGATAATGACATCTGTGGATTCTaGCTCCACTTCCTATTCAGGACGCTGAGGCAGGAG | + |
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Preference number: 6 (lower is better) Translates to: QSVQMDNDICGF*LHFLFRTLRQE Trigger: CTCCTGCCTCAGCGTCCTGAATAGGAAGTGGAGCCAGAATCCACAGATGTCATTATCCATCTGCACACTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000423178.6 ENST00000527483.5 ENST00000528844.1 |
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| CDS TCA 72 bp | TCATCCACTAAGATCTTCTGGGACAGGAAAGCCCTGTaGTACCTCTTACATCACACCAAACAGAGCCCCACA | + |
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Preference number: 6 (lower is better) Translates to: SSTKIFWDRKAL*YLLHHTKQSPT Trigger: TGTGGGGCTCTGTTTGGTGTGATGTAAGAGGTATCACAGGGCTTTCCTGTCCCAGAAGATCTTAGTGGATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000423178.6 |
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| CDS CCA 72 bp | TTTCACCCGTATAATGCCACTCCAGGCTCTGCCTCTTaGGTAGTGTCCTATGTCCTAGAATATTCCCAGATG | + |
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Preference number: 6 (lower is better) Translates to: FHPYNATPGSAS*VVSYVLEYSQM Trigger: CATCTGGGAATATTCTAGGACATAGGACACTACCCAAGAGGCAGAGCCTGGAGTGGCATTATACGGGTGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423178.6 |
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| CDS CAA 72 bp | GAAGGAGTTCAAGTCCAGCCTGGACGGTCTCTGGTTTaGCCTTTCTTCACACATGTCCATTTACCCATTGAT | + |
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Preference number: 6 (lower is better) Translates to: EGVQVQPGRSLV*PFFTHVHLPID Trigger: ATCAATGGGTAAATGGACATGTGTGAAGAAAGGCAAAACCAGAGACCGTCCAGGCTGGACTTGAACTCCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423178.6 |
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| CDS TCA 72 bp | AGCACTGAACCCTGTAGGCCAGAAACCATGATTGACTaGTATGTTGAATCCAGCACTAAGCCTAGGACTCAA | + |
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Preference number: 6 (lower is better) Translates to: STEPCRPETMID*YVESSTKPRTQ Trigger: TTGAGTCCTAGGCTTAGTGCTGGATTCAACATATCAGTCAATCATGGTTTCTGGCCTACAGGGTTCAGTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000423178.6 |
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| CDS CCA 72 bp | GCTTTGAATGGGACTTTCACTCGGGGTAAACATGAGTaGTCGGAGCTTCCCAAGTCATTTGTGATAAGAAAG | + |
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Preference number: 6 (lower is better) Translates to: ALNGTFTRGKHE*SELPKSFVIRK Trigger: CTTTCTTATCACAAATGACTTGGGAAGCTCCGACCACTCATGTTTACCCCGAGTGAAAGTCCCATTCAAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000423178.6 ENST00000525909.1 ENST00000527483.5 ENST00000528844.1 |
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| CDS TCA 72 bp | TTTATTATTAAGCTAGAAAAAGCCCAAGGGTTTCTTTaGGAGCCCAATTGCCTACCTCCTCCACCCCAGAAC | + |
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Preference number: 6 (lower is better) Translates to: FIIKLEKAQGFL*EPNCLPPPPQN Trigger: GTTCTGGGGTGGAGGAGGTAGGCAATTGGGCTCTCAAAGAAACCCTTGGGCTTTTTCTAGCTTAATAATAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000423178.6 |
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| CDS GCA 72 bp | TGCAATATTCTTGCCTTCTGGGTAGTAAACAAAGTGTaGAGATGGATAATGACATCTGTGGATTCTGGCTCC | + |
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Preference number: 6 (lower is better) Translates to: CNILAFWVVNKV*RWIMTSVDSGS Trigger: GGAGCCAGAATCCACAGATGTCATTATCCATCTGCACACTTTGTTTACTACCCAGAAGGCAAGAATATTGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000423178.6 ENST00000525909.1 ENST00000527483.5 ENST00000528844.1 |
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| CDS CAA 72 bp | TATTGCCCCTACTACCTAATTTCCATTAGGCCCACTTaGATTTCCTTTCAGTTTCCTAATTGGGGTCTGGAG | + |
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Preference number: 6 (lower is better) Translates to: YCPYYLISIRPT*ISFQFPNWGLE Trigger: CTCCAGACCCCAATTAGGAAACTGAAAGGAAATCAAAGTGGGCCTAATGGAAATTAGGTAGTAGGGGCAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000423178.6 |
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| CDS TCA 72 bp | CAATTATGTCCAATCAGTTTTATGGATAAAGAAGCCTaGGACTCTCCAACAGGAGAGCTTGAGTTTCCCTTC | + |
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Preference number: 6 (lower is better) Translates to: QLCPISFMDKEA*DSPTGELEFPF Trigger: GAAGGGAAACTCAAGCTCTCCTGTTGGAGAGTCTCAGGCTTCTTTATCCATAAAACTGATTGGACATAATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000528844.1 |
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