RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EDRF1 (Homo sapiens)

Ensembl gene IDs: ENSG00000107938

Ensembl transcript IDs: ENST00000337623.7, ENST00000356792.9, ENST00000368812.1, ENST00000368813.1, ENST00000368815.6, ENST00000419769.6, ENST00000469725.1, ENST00000481600.5, ENST00000525091.5, ENST00000525358.1, ENST00000527655.5, ENST00000530795.1

Found 956 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGCGTGTCTGGGACACGGCTCTGTGCAGTCACTGAACGGCATTGCTaGTCGCTGCACTGCCGGCGGCAAGCTGGCCCAGCAGGTGGACGA +
Preference number: 1 (lower is better)
Translates to: SVSGTRLCAVTERHC*SLHCRRQAGPAGGR
Trigger: TCGTCCACCTGCTGGGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAATGCCGTTCAGTGACTGCACAGAGCCGTGTCCCAGACACGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
ENST00000525358.1
3UTR GCA 90 bp GACAGCGTGTCTGGGACACGGCTCTGTGCAGTCACTGAACGGCATTaGTGCTCGCTGCACTGCCGGCGGCAAGCTGGCCCAGCAGGTGGA +
Preference number: 1 (lower is better)
Translates to: DSVSGTRLCAVTERH*CSLHCRRQAGPAGG
Trigger: TCCACCTGCTGGGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAATGCCGTTCAGTGACTGCACAGAGCCGTGTCCCAGACACGCTGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
ENST00000525358.1
3UTR GCA 90 bp CTGGGACACGGCTCTGTGCAGTCACTGAACGGCATTGCTGCTCGCTaGACTGCCGGCGGCAAGCTGGCCCAGCAGGTGGACGATAACGTT +
Preference number: 1 (lower is better)
Translates to: LGHGSVQSLNGIAAR*TAGGKLAQQVDDNV
Trigger: AACGTTATCGTCCACCTGCTGGGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAATGCCGTTCAGTGACTGCACAGAGCCGTGTCCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
ENST00000525358.1
3UTR CCA 90 bp GATTCCTCAGACAGCTGTGGTACATGGAGGCCAGCCTGTGATGGATaGTTGCAGCTCGATACTGACAAAGGGGCTGTCGAGCAGACACTG +
Preference number: 1 (lower is better)
Translates to: DSSDSCGTWRPACDG*LQLDTDKGAVEQTL
Trigger: CAGTGTCTGCTCGACAGCCCCTTTGTCAGTATCGAGCTGCAACCATCCATCACAGGCTGGCCTCCATGTACCACAGCTGTCTGAGGAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
3UTR CCA 90 bp GCATTGCTGCTCGCTGCACTGCCGGCGGCAAGCTGGCCCAGCAGGTaGACGATAACGTTGATTCTTTCCAGAAGAGTCGCGGTTTTATTT +
Preference number: 1 (lower is better)
Translates to: ALLLAALPAASWPSR*TITLILSRRVAVLF
Trigger: AAATAAAACCGCGACTCTTCTGGAAAGAATCAACGTTATCGTCCACCTGCTGGGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
ENST00000525358.1
3UTR TCA 90 bp TCAGTTCATCCCCTGCACCACAGTGGGCCTGCGCACAAATCCGCATaGGCCTTCCCGTGTTACATAATAAAAGGGCGGCATTGGTGGCAT +
Preference number: 1 (lower is better)
Translates to: SVHPLHHSGPAHKSA*AFPCYIIKGRHWWH
Trigger: ATGCCACCAATGCCGCCCTTTTATTATGTAACACGGGAAGGCTCATGCGGATTTGTGCGCAGGCCCACTGTGGTGCAGGGGATGAACTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
3UTR GCA 90 bp TCTAAGCAGTTCGCAGGGAGCATCTTTCAGCAGCTGAAACAGCTTTaGGGCCTTGCTGTAATGAAGATCTGCCAGCACCCGGTGTTGTTT +
Preference number: 1 (lower is better)
Translates to: SKQFAGSIFQQLKQL*GLAVMKICQHPVLF
Trigger: AAACAACACCGGGTGCTGGCAGATCTTCATTACAGCAAGGCCGCAAAGCTGTTTCAGCTGCTGAAAGATGCTCCCTGCGAACTGCTTAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
3UTR GCA 90 bp TTTCAGCAGCTGAAACAGCTTTGCGGCCTTGCTGTAATGAAGATCTaGCAGCACCCGGTGTTGTTTCCTAAGGTGTTCATCACCAACCTG +
Preference number: 1 (lower is better)
Translates to: FQQLKQLCGLAVMKI*QHPVLFPKVFITNL
Trigger: CAGGTTGGTGATGAACACCTTAGGAAACAACACCGGGTGCTGGCAGATCTTCATTACAGCAAGGCCGCAAAGCTGTTTCAGCTGCTGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
3UTR CCA 90 bp TCTTCTGGTGAAAATTCACGTTTCAGTTCATCCCCTGCACCACAGTaGGCCTGCGCACAAATCCGCATGAGCCTTCCCGTGTTACATAAT +
Preference number: 1 (lower is better)
Translates to: SSGENSRFSSSPAPQ*ACAQIRMSLPVLHN
Trigger: ATTATGTAACACGGGAAGGCTCATGCGGATTTGTGCGCAGGCCCACTGTGGTGCAGGGGATGAACTGAAACGTGAATTTTCACCAGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
3UTR GCA 90 bp TTTCATCACTTCTTCTCGATTGAGACTAGGAGAAGCATCAGCAGCTaGAGCGGCGTCACCACTCTTAGGCTGGCCAAATTCTTCTATAAG +
Preference number: 1 (lower is better)
Translates to: FHHFFSIETRRSISS*SGVTTLRLAKFFYK
Trigger: CTTATAGAAGAATTTGGCCAGCCTAAGAGTGGTGACGCCGCTGCAGCTGCTGATGCTTCTCCTAGTCTCAATCGAGAAGAAGTGATGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
3UTR CCA 90 bp CTCTTAGGCTGGCCAAATTCTTCTATAAGCTCCTTCTGGATAAGCTaGAATGCGTGCTCAGTTCTCACCATTATATCAAGAGCCCCAGAT +
Preference number: 1 (lower is better)
Translates to: LLGWPNSSISSFWIS*NACSVLTIISRAPD
Trigger: ATCTGGGGCTCTTGATATAATGGTGAGAACTGAGCACGCATTCCAGCTTATCCAGAAGGAGCTTATAGAAGAATTTGGCCAGCCTAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
3UTR CCA 90 bp GCGTCACCACTCTTAGGCTGGCCAAATTCTTCTATAAGCTCCTTCTaGATAAGCTGGAATGCGTGCTCAGTTCTCACCATTATATCAAGA +
Preference number: 1 (lower is better)
Translates to: ASPLLGWPNSSISSF*ISWNACSVLTIISR
Trigger: TCTTGATATAATGGTGAGAACTGAGCACGCATTCCAGCTTATCCAGAAGGAGCTTATAGAAGAATTTGGCCAGCCTAAGAGTGGTGACGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
3UTR TCA 90 bp GACTCATGGCAGCATCGGACAAAACATAATAGGCCTTTGATGACTTaGGAATCAGCTGAAGTTTCATTTTATGTTGCCAAGAGCCAGGGA +
Preference number: 1 (lower is better)
Translates to: DSWQHRTKHNRPLMT*ESAEVSFYVAKSQG
Trigger: TCCCTGGCTCTTGGCAACATAAAATGAAACTTCAGCTGATTCTCAAGTCATCAAAGGCCTATTATGTTTTGTCCGATGCTGCCATGAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
3UTR GCA 90 bp TGGCCAAATTCTTCTATAAGCTCCTTCTGGATAAGCTGGAATGCGTaGTCAGTTCTCACCATTATATCAAGAGCCCCAGATAGTGTTTTC +
Preference number: 1 (lower is better)
Translates to: WPNSSISSFWISWNA*SVLTIISRAPDSVF
Trigger: GAAAACACTATCTGGGGCTCTTGATATAATGGTGAGAACTGAGCACGCATTCCAGCTTATCCAGAAGGAGCTTATAGAAGAATTTGGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
3UTR CCA 90 bp GTTGCAAGCAACCTTGTACAAGAGAATGGCTACCGGCATTGTGAATaGATTTTGGTATTTGTCTTCAGTTTCTTCACAAAGAGTAGTGAG +
Preference number: 1 (lower is better)
Translates to: VASNLVQENGYRHCE*ILVFVFSFFTKSSE
Trigger: CTCACTACTCTTTGTGAAGAAACTGAAGACAAATACCAAAATCCATTCACAATGCCGGTAGCCATTCTCTTGTACAAGGTTGCTTGCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481600.5
ENST00000530795.1
3UTR TCA 90 bp AATCATATCTTAGACCCGTGTAGCTTGACATACTTCAAAAATACGTaGAAGTGTAACTGCATCACAGCAGGTCTGTTAATACCGAGGTAC +
Preference number: 1 (lower is better)
Translates to: NHILDPCSLTYFKNT*KCNCITAGLLIPRY
Trigger: GTACCTCGGTATTAACAGACCTGCTGTGATGCAGTTACACTTTCACGTATTTTTGAAGTATGTCAAGCTACACGGGTCTAAGATATGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
3UTR GCA 90 bp GTACAATTCCATTTACATGAAAACACATCACAAGCTCTGGCACATTaGATATCAAGTTGTCCAACCAATAGTCAATTCCAGTTAGCACAT +
Preference number: 1 (lower is better)
Translates to: VQFHLHENTSQALAH*ISSCPTNSQFQLAH
Trigger: ATGTGCTAACTGGAATTGACTATTGGTTGGACAACTTGATATGCAATGTGCCAGAGCTTGTGATGTGTTTTCATGTAAATGGAATTGTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481600.5
3UTR CCA 90 bp ATATTTCTGTACAATTCCATTTACATGAAAACACATCACAAGCTCTaGCACATTGCATATCAAGTTGTCCAACCAATAGTCAATTCCAGT +
Preference number: 1 (lower is better)
Translates to: IFLYNSIYMKTHHKL*HIAYQVVQPIVNSS
Trigger: ACTGGAATTGACTATTGGTTGGACAACTTGATATGCAATGTGCCAGAGCTTGTGATGTGTTTTCATGTAAATGGAATTGTACAGAAATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481600.5
3UTR-3UTR CCA 90 bp CGGCATTGCTGCTCGCTGCACTGCCGGCGGCAAGCTGGCCCAGCAGGTGGACGATCCCCTGCACCACAGTaGGCCTGCGCACAAATCCGC +
Preference number: 2 (lower is better)
Translates to: RHCCSLHCRRQAGPAGGRSPAPQ*ACAQIR
Trigger: GCGGATTTGTGCGCAGGCCCACTGTGGTGCAGGGGA...TCGTCCACCTGCTGGGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAATGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
3UTR-3UTR GCA 90 bp CGGCATTGCTGCTCGCTGCACTGCCGGCGGCAAGCTGGCCCAGCAGGTGGACGATTTCAGTTCATCCCCTaGACCACAGTGGGCCTGCGC +
Preference number: 2 (lower is better)
Translates to: RHCCSLHCRRQAGPAGGRFQFIP*TTVGLR
Trigger: GCGCAGGCCCACTGTGGTGCAGGGGATGAACTGAAA...TCGTCCACCTGCTGGGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAATGCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
3UTR-3UTR CCA 90 bp TTGCTGCTCGCTGCACTGCCGGCGGCAAGCTGGCCCAGCAGGTGGACGATAACGACGGGATTGGAGTGCTaGGGTCAGCTGCTGGAAGGT +
Preference number: 2 (lower is better)
Translates to: LLLAALPAASWPSRWTITTGLEC*GQLLEG
Trigger: ACCTTCCAGCAGCTGACCCCAGCACTCCAATCCCGT...CGTTATCGTCCACCTGCTGGGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
3UTR-3UTR CCA 90 bp CACGGCTCTGTGCAGTCACTGAACGGCATTGCTGCTCGCTGCACTGCCGGCGGCGACAGCTGTGGTACATaGAGGCCAGCCTGTGATGGA +
Preference number: 2 (lower is better)
Translates to: HGSVQSLNGIAARCTAGGDSCGT*RPACDG
Trigger: TCCATCACAGGCTGGCCTCCATGTACCACAGCTGTC...GCCGCCGGCAGTGCAGCGAGCAGCAATGCCGTTCAGTGACTGCACAGAGCCGTG
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
3UTR-3UTR GCA 90 bp CCTCAGACAGCTGTGGTACATGGAGGCCAGCCTGTGATGGATGGTTGCAGCTCGACTGAACGGCATTGCTaGTCGCTGCACTGCCGGCGG +
Preference number: 2 (lower is better)
Translates to: PQTAVVHGGQPVMDGCSSTERHC*SLHCRR
Trigger: CCGCCGGCAGTGCAGCGAGCAGCAATGCCGTTCAGT...CGAGCTGCAACCATCCATCACAGGCTGGCCTCCATGTACCACAGCTGTCTGAGG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
3UTR-3UTR CCA 90 bp TTGCTGCTCGCTGCACTGCCGGCGGCAAGCTGGCCCAGCAGGTGGACGATAACGTCCTTCTGGATAAGCTaGAATGCGTGCTCAGTTCTC +
Preference number: 2 (lower is better)
Translates to: LLLAALPAASWPSRWTITSFWIS*NACSVL
Trigger: GAGAACTGAGCACGCATTCCAGCTTATCCAGAAGGA...CGTTATCGTCCACCTGCTGGGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
3UTR-3UTR CCA 90 bp ACACGGCTCTGTGCAGTCACTGAACGGCATTGCTGCTCGCTGCACTGCCGGCGGGTGTTAATGGCAGCGTaGTTACACACTGTGCTGAGG +
Preference number: 2 (lower is better)
Translates to: TRLCAVTERHCCSLHCRRVLMAA*LHTVLR
Trigger: CCTCAGCACAGTGTGTAACCACGCTGCCATTAACAC...CCGCCGGCAGTGCAGCGAGCAGCAATGCCGTTCAGTGACTGCACAGAGCCGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419769.6
3UTR-3UTR GCA 90 bp GCGGCAAGCTGGCCCAGCAGGTGGACGATAACGTTGATTCTTTCCAGAAGAGTCGTCACTGAACGGCATTaGTGCTCGCTGCACTGCCGG +
Preference number: 2 (lower is better)
Translates to: AASWPSRWTITLILSRRVVTERH*CSLHCR
Trigger: CCGGCAGTGCAGCGAGCAGCAATGCCGTTCAGTGAC...GACTCTTCTGGAAAGAATCAACGTTATCGTCCACCTGCTGGGCCAGCTTGCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
ENST00000525358.1
3UTR-3UTR GCA 90 bp GTGCAGTCACTGAACGGCATTGCTGCTCGCTGCACTGCCGGCGGCAAGCTGGCCCAAGCTCTGGCACATTaGATATCAAGTTGTCCAACC +
Preference number: 2 (lower is better)
Translates to: VQSLNGIAARCTAGGKLAQALAH*ISSCPT
Trigger: GGTTGGACAACTTGATATGCAATGTGCCAGAGCTTG...GGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAATGCCGTTCAGTGACTGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481600.5
3UTR-3UTR TCA 90 bp CAGCTGAAACAGCTTTGCGGCCTTGCTGTAATGAAGATCTGCCAGCACCCGGTGATGGAGGCCAGCCTGTaGTGGATGGTTGCAGCTCGA +
Preference number: 2 (lower is better)
Translates to: QLKQLCGLAVMKICQHPVMEASL*WMVAAR
Trigger: TCGAGCTGCAACCATCCATCACAGGCTGGCCTCCAT...CACCGGGTGCTGGCAGATCTTCATTACAGCAAGGCCGCAAAGCTGTTTCAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
3UTR-3UTR GCA 90 bp CCTCAGACAGCTGTGGTACATGGAGGCCAGCCTGTGATGGATGGTTGCAGCTCGTTAACGGGATTGGAGTaGTGGGGTCAGCTGCTGGAA +
Preference number: 2 (lower is better)
Translates to: PQTAVVHGGQPVMDGCSSLTGLE*WGQLLE
Trigger: TTCCAGCAGCTGACCCCAGCACTCCAATCCCGTTAA...CGAGCTGCAACCATCCATCACAGGCTGGCCTCCATGTACCACAGCTGTCTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
3UTR-3UTR GCA 90 bp TCAGCAGCTGAAACAGCTTTGCGGCCTTGCTGTAATGAAGATCTGCCAGCACCCGCACCACAGTGGGCCTaGGCACAAATCCGCATGAGC +
Preference number: 2 (lower is better)
Translates to: SAAETALRPCCNEDLPAPAPQWA*AQIRMS
Trigger: GCTCATGCGGATTTGTGCGCAGGCCCACTGTGGTGC...GGGTGCTGGCAGATCTTCATTACAGCAAGGCCGCAAAGCTGTTTCAGCTGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
3UTR CAA 90 bp GCTGCACTGCCGGCGGCAAGCTGGCCCAGCAGGTGGACGATAACGTaGATTCTTTCCAGAAGAGTCGCGGTTTTATTTGCAGTTGCTCTC +
Preference number: 2 (lower is better)
Translates to: AALPAASWPSRWTIT*ILSRRVAVLFAVAL
Trigger: GAGAGCAACTGCAAATAAAACCGCGACTCTTCTGGAAAGAATCAACGTTATCGTCCACCTGCTGGGCCAGCTTGCCGCCGGCAGTGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
ENST00000525358.1
3UTR-3UTR TCA 90 bp TTGCTGCTCGCTGCACTGCCGGCGGCAAGCTGGCCCAGCAGGTGGACGATAACGTGTGCTTGTTGGTTTTaGGAATTGTGTCATCTTCGA +
Preference number: 2 (lower is better)
Translates to: LLLAALPAASWPSRWTITCACWF*ELCHLR
Trigger: TCGAAGATGACACAATTCTCAAAACCAACAAGCACA...CGTTATCGTCCACCTGCTGGGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
ENST00000525358.1
3UTR-3UTR GCA 90 bp ACACGGCTCTGTGCAGTCACTGAACGGCATTGCTGCTCGCTGCACTGCCGGCGGGCAGGTCAATGCCAATaGAGTTGTCATATGATGATG +
Preference number: 2 (lower is better)
Translates to: TRLCAVTERHCCSLHCRRAGQCQ*SCHMMM
Trigger: CATCATCATATGACAACTGCATTGGCATTGACCTGC...CCGCCGGCAGTGCAGCGAGCAGCAATGCCGTTCAGTGACTGCACAGAGCCGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525358.1
3UTR-3UTR CCA 90 bp GCGGCAAGCTGGCCCAGCAGGTGGACGATAACGTTGATTCTTTCCAGAAGAGTCGACAGCTGTGGTACATaGAGGCCAGCCTGTGATGGA +
Preference number: 2 (lower is better)
Translates to: AASWPSRWTITLILSRRVDSCGT*RPACDG
Trigger: TCCATCACAGGCTGGCCTCCATGTACCACAGCTGTC...GACTCTTCTGGAAAGAATCAACGTTATCGTCCACCTGCTGGGCCAGCTTGCCGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
3UTR CAA 90 bp TCCTCAGACAGCTGTGGTACATGGAGGCCAGCCTGTGATGGATGGTaGCAGCTCGATACTGACAAAGGGGCTGTCGAGCAGACACTGAAT +
Preference number: 2 (lower is better)
Translates to: SSDSCGTWRPACDGW*QLDTDKGAVEQTLN
Trigger: ATTCAGTGTCTGCTCGACAGCCCCTTTGTCAGTATCGAGCTGCAACCATCCATCACAGGCTGGCCTCCATGTACCACAGCTGTCTGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
3UTR-3UTR TCA 90 bp ACTGACAGCGTGTCTGGGACACGGCTCTGTGCAGTCACTGAACGGCATTGCTGCAAACAAAGCACCGAATaGACAAACCGGCTCCGTGTT +
Preference number: 2 (lower is better)
Translates to: TDSVSGTRLCAVTERHCCKQSTE*TNRLRV
Trigger: AACACGGAGCCGGTTTGTTCATTCGGTGCTTTGTTT...GCAGCAATGCCGTTCAGTGACTGCACAGAGCCGTGTCCCAGACACGCTGTCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000525358.1
3UTR-3UTR TCA 90 bp ACAGCTGTGGTACATGGAGGCCAGCCTGTGATGGATGGTTGCAGCTCGATACTGGCGCACAAATCCGCATaGGCCTTCCCGTGTTACATA +
Preference number: 2 (lower is better)
Translates to: TAVVHGGQPVMDGCSSILAHKSA*AFPCYI
Trigger: TATGTAACACGGGAAGGCTCATGCGGATTTGTGCGC...CAGTATCGAGCTGCAACCATCCATCACAGGCTGGCCTCCATGTACCACAGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
3UTR-3UTR GCA 90 bp GCGGCGTCACCACTCTTAGGCTGGCCAAATTCTTCTATAAGCTCCTTCTGGATAGCACCACAGTGGGCCTaGGCACAAATCCGCATGAGC +
Preference number: 2 (lower is better)
Translates to: AASPLLGWPNSSISSFWIAPQWA*AQIRMS
Trigger: GCTCATGCGGATTTGTGCGCAGGCCCACTGTGGTGC...TATCCAGAAGGAGCTTATAGAAGAATTTGGCCAGCCTAAGAGTGGTGACGCCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
3UTR-3UTR GCA 90 bp ATTGCTGCTCGCTGCACTGCCGGCGGCAAGCTGGCCCAGCAGGTGGACGATAACTTTCTAGCAGGTCAATaGCAATGCAGTTGTCATATG +
Preference number: 2 (lower is better)
Translates to: IAARCTAGGKLAQQVDDNFLAGQ*QCSCHM
Trigger: CATATGACAACTGCATTGGCATTGACCTGCTAGAAA...GTTATCGTCCACCTGCTGGGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525358.1
3UTR-3UTR CCA 90 bp GCGGCAAGCTGGCCCAGCAGGTGGACGATAACGTTGATTCTTTCCAGAAGAGTCCCAGCCTGTGATGGATaGTTGCAGCTCGATACTGAC +
Preference number: 2 (lower is better)
Translates to: AASWPSRWTITLILSRRVPACDG*LQLDTD
Trigger: GTCAGTATCGAGCTGCAACCATCCATCACAGGCTGG...GACTCTTCTGGAAAGAATCAACGTTATCGTCCACCTGCTGGGCCAGCTTGCCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
3UTR-3UTR TCA 90 bp GCGGCAAGCTGGCCCAGCAGGTGGACGATAACGTTGATTCTTTCCAGAAGAGTCGCTCTTCCGTATTTCTaGAGACTCATGGCAGCATCG +
Preference number: 2 (lower is better)
Translates to: AASWPSRWTITLILSRRVALPYF*RLMAAS
Trigger: CGATGCTGCCATGAGTCTTCAGAAATACGGAAGAGC...GACTCTTCTGGAAAGAATCAACGTTATCGTCCACCTGCTGGGCCAGCTTGCCGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
3UTR-3UTR GCA 90 bp GCGGCAAGCTGGCCCAGCAGGTGGACGATAACGTTGATTCTTTCCAGAAGAGTCAAAAACAAGGCCATCTaGTTCTCTAGCCCCTCGGGA +
Preference number: 2 (lower is better)
Translates to: AASWPSRWTITLILSRRVKNKAI*FSSPSG
Trigger: TCCCGAGGGGCTAGAGAAGCAGATGGCCTTGTTTTT...GACTCTTCTGGAAAGAATCAACGTTATCGTCCACCTGCTGGGCCAGCTTGCCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
3UTR-3UTR GCA 90 bp GGCGTCACCACTCTTAGGCTGGCCAAATTCTTCTATAAGCTCCTTCTGGATAAGGCACCACAGTGGGCCTaGGCACAAATCCGCATGAGC +
Preference number: 2 (lower is better)
Translates to: GVTTLRLAKFFYKLLLDKAPQWA*AQIRMS
Trigger: GCTCATGCGGATTTGTGCGCAGGCCCACTGTGGTGC...CTTATCCAGAAGGAGCTTATAGAAGAATTTGGCCAGCCTAAGAGTGGTGACGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
3UTR-3UTR GCA 90 bp CCTCAGACAGCTGTGGTACATGGAGGCCAGCCTGTGATGGATGGTTGCAGCTCGCGGAAAGCATATTGGTaGAGAGGCAGCAATAAGTAT +
Preference number: 2 (lower is better)
Translates to: PQTAVVHGGQPVMDGCSSRKAYW*RGSNKY
Trigger: ATACTTATTGCTGCCTCTGCACCAATATGCTTTCCG...CGAGCTGCAACCATCCATCACAGGCTGGCCTCCATGTACCACAGCTGTCTGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
3UTR-3UTR GCA 90 bp TGGAGGCCAGCCTGTGATGGATGGTTGCAGCTCGATACTGACAAAGGGGCTGTCTTTTTCCACAACTGTTaGTCGGCAGCAGACACAGAT +
Preference number: 2 (lower is better)
Translates to: WRPACDGWLQLDTDKGAVFFHNC*SAADTD
Trigger: ATCTGTGTCTGCTGCCGAGCAACAGTTGTGGAAAAA...GACAGCCCCTTTGTCAGTATCGAGCTGCAACCATCCATCACAGGCTGGCCTCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
3UTR-3UTR CCA 90 bp TGGAGGCCAGCCTGTGATGGATGGTTGCAGCTCGATACTGACAAAGGGGCTGTCTGGGCCAGCATTAGTTaGATATCACCACAAAGTGTC +
Preference number: 2 (lower is better)
Translates to: WRPACDGWLQLDTDKGAVWASIS*ISPQSV
Trigger: GACACTTTGTGGTGATATCCAACTAATGCTGGCCCA...GACAGCCCCTTTGTCAGTATCGAGCTGCAACCATCCATCACAGGCTGGCCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
3UTR CAA 90 bp CAGCTTTGCGGCCTTGCTGTAATGAAGATCTGCCAGCACCCGGTGTaGTTTCCTAAGGTGTTCATCACCAACCTGATTCCTCAGACAGCT +
Preference number: 2 (lower is better)
Translates to: QLCGLAVMKICQHPV*FPKVFITNLIPQTA
Trigger: AGCTGTCTGAGGAATCAGGTTGGTGATGAACACCTTAGGAAACAACACCGGGTGCTGGCAGATCTTCATTACAGCAAGGCCGCAAAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
3UTR-3UTR TCA 90 bp TCTCGATTGAGACTAGGAGAAGCATCAGCAGCTGCAGCGGCGTCACCACTCTTACTCGGGACCCCCTCTTaGGGATTCATCTTCATATTT +
Preference number: 2 (lower is better)
Translates to: SRLRLGEASAAAAASPLLLGTPS*GFIFIF
Trigger: AAATATGAAGATGAATCCTCAAGAGGGGGTCCCGAG...TAAGAGTGGTGACGCCGCTGCAGCTGCTGATGCTTCTCCTAGTCTCAATCGAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
3UTR-3UTR GCA 90 bp GCTGTGGTACATGGAGGCCAGCCTGTGATGGATGGTTGCAGCTCGATACTGACACAAATCAGTTGCCCATaGAAATCCTTGGCAACTGGA +
Preference number: 2 (lower is better)
Translates to: AVVHGGQPVMDGCSSILTQISCP*KSLATG
Trigger: TCCAGTTGCCAAGGATTTGCATGGGCAACTGATTTG...TGTCAGTATCGAGCTGCAACCATCCATCACAGGCTGGCCTCCATGTACCACAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
3UTR-3UTR GCA 90 bp AGGCCAGCCTGTGATGGATGGTTGCAGCTCGATACTGACAAAGGGGCTGTCGAGCAAATCAGTTGCCCATaGAAATCCTTCAGAAGACTC +
Preference number: 2 (lower is better)
Translates to: RPACDGWLQLDTDKGAVEQISCP*KSFRRL
Trigger: GAGTCTTCTGAAGGATTTGCATGGGCAACTGATTTG...CTCGACAGCCCCTTTGTCAGTATCGAGCTGCAACCATCCATCACAGGCTGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419769.6
3UTR-3UTR GCA 90 bp TGGAGGCCAGCCTGTGATGGATGGTTGCAGCTCGATACTGACAAAGGGGCTGTCATGGCAAACTGGAAATaGACAACTGGGTCTGATTTG +
Preference number: 2 (lower is better)
Translates to: WRPACDGWLQLDTDKGAVMANWK*TTGSDL
Trigger: CAAATCAGACCCAGTTGTGCATTTCCAGTTTGCCAT...GACAGCCCCTTTGTCAGTATCGAGCTGCAACCATCCATCACAGGCTGGCCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481600.5
3UTR-3UTR CCA 90 bp GCAGCTGAAACAGCTTTGCGGCCTTGCTGTAATGAAGATCTGCCAGCACCCGGTTCTATAAGCTCCTTCTaGATAAGCTGGAATGCGTGC +
Preference number: 2 (lower is better)
Translates to: AAETALRPCCNEDLPAPGSISSF*ISWNAC
Trigger: GCACGCATTCCAGCTTATCCAGAAGGAGCTTATAGA...ACCGGGTGCTGGCAGATCTTCATTACAGCAAGGCCGCAAAGCTGTTTCAGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
3UTR-3UTR CCA 90 bp TCAGCAGCTGAAACAGCTTTGCGGCCTTGCTGTAATGAAGATCTGCCAGCACCCAAAGGGCGGCATTGGTaGCATCCTCAATTGATTCAA +
Preference number: 2 (lower is better)
Translates to: SAAETALRPCCNEDLPAPKGRHW*HPQLIQ
Trigger: TTGAATCAATTGAGGATGCCACCAATGCCGCCCTTT...GGGTGCTGGCAGATCTTCATTACAGCAAGGCCGCAAAGCTGTTTCAGCTGCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
3UTR-3UTR CCA 90 bp CCTCAGACAGCTGTGGTACATGGAGGCCAGCCTGTGATGGATGGTTGCAGCTCGTACCGGCATTGTGAATaGATTTTGGTATTTGTCTTC +
Preference number: 2 (lower is better)
Translates to: PQTAVVHGGQPVMDGCSSYRHCE*ILVFVF
Trigger: GAAGACAAATACCAAAATCCATTCACAATGCCGGTA...CGAGCTGCAACCATCCATCACAGGCTGGCCTCCATGTACCACAGCTGTCTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481600.5
3UTR CAA 90 bp AACCGAGACTCAAATATACTGAGGAGTTTCATCACTTCTTCTCGATaGAGACTAGGAGAAGCATCAGCAGCTGCAGCGGCGTCACCACTC +
Preference number: 2 (lower is better)
Translates to: NRDSNILRSFITSSR*RLGEASAAAAASPL
Trigger: GAGTGGTGACGCCGCTGCAGCTGCTGATGCTTCTCCTAGTCTCAATCGAGAAGAAGTGATGAAACTCCTCAGTATATTTGAGTCTCGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
3UTR-3UTR TCA 90 bp TTGAGGATTCATCTTCATATTTTAACGGGATTGGAGTGCTGGGGTCAGCTGCTGCAACTGGACTCTCTGTaGAGGCTATGCAGGATCTCC +
Preference number: 2 (lower is better)
Translates to: LRIHLHILTGLECWGQLLQLDSL*RLCRIS
Trigger: GGAGATCCTGCATAGCCTTCACAGAGAGTCCAGTTG...CAGCAGCTGACCCCAGCACTCCAATCCCGTTAAAATATGAAGATGAATCCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
3UTR-3UTR TCA 90 bp GCAGCTGAAACAGCTTTGCGGCCTTGCTGTAATGAAGATCTGCCAGCACCCGGTAGCAGTTTAATGGACTaGAGGAGAAGAAATGACAAC +
Preference number: 2 (lower is better)
Translates to: AAETALRPCCNEDLPAPGSSLMD*RRRNDN
Trigger: GTTGTCATTTCTTCTCCTTCAGTCCATTAAACTGCT...ACCGGGTGCTGGCAGATCTTCATTACAGCAAGGCCGCAAAGCTGTTTCAGCTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
3UTR-3UTR TCA 90 bp GCCCAGCAGGTGGACGATAACGTTGATTCTTTCCAGAAGAGTCGCGGTTTTATTGGTTACACACTGTGCTaGGGTAAGAGGGAGGGATAT +
Preference number: 2 (lower is better)
Translates to: AQQVDDNVDSFQKSRGFIGYTLC*GKREGY
Trigger: ATATCCCTCCCTCTTACCTCAGCACAGTGTGTAACC...AATAAAACCGCGACTCTTCTGGAAAGAATCAACGTTATCGTCCACCTGCTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419769.6
3UTR-3UTR GCA 90 bp ACTGGACTCTCTGTGAAGGCTATGCAGGATCTCCTGGTCTTCTTTTGTTTGGTAAGTGCTGGGGTCAGCTaGTGGAAGGTCGCTTTCTTT +
Preference number: 2 (lower is better)
Translates to: TGLSVKAMQDLLVFFCLVSAGVS*WKVAFF
Trigger: AAAGAAAGCGACCTTCCAGCAGCTGACCCCAGCACT...TACCAAACAAAAGAAGACCAGGAGATCCTGCATAGCCTTCACAGAGAGTCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
3UTR-3UTR GCA 90 bp GACACTGAATCCACATCGCAGTATTTTAGGGACTTCATCATGGCCTCACTGACTTTAACGGGATTGGAGTaGTGGGGTCAGCTGCTGGAA +
Preference number: 2 (lower is better)
Translates to: DTESTSQYFRDFIMASLTLTGLE*WGQLLE
Trigger: TTCCAGCAGCTGACCCCAGCACTCCAATCCCGTTAA...AGTCAGTGAGGCCATGATGAAGTCCCTAAAATACTGCGATGTGGATTCAGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
3UTR-3UTR CCA 90 bp AAGCAGTTCGCAGGGAGCATCTTTCAGCAGCTGAAACAGCTTTGCGGCCTTGCTCTGATGGATCAGAGCTaGTGCTATAGGATCCATTTT +
Preference number: 2 (lower is better)
Translates to: KQFAGSIFQQLKQLCGLALMDQS*CYRIHF
Trigger: AAAATGGATCCTATAGCACCAGCTCTGATCCATCAG...AGCAAGGCCGCAAAGCTGTTTCAGCTGCTGAAAGATGCTCCCTGCGAACTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481600.5
3UTR-3UTR TCA 90 bp AATCCCAAACAGCTGGGTGTATGTCTCGTGTTCCCAATGACCTTAGCGCTTTCAAAACAAAGCACCGAATaGACAAACCGGCTCCGTGTT +
Preference number: 2 (lower is better)
Translates to: NPKQLGVCLVFPMTLALSKQSTE*TNRLRV
Trigger: AACACGGAGCCGGTTTGTTCATTCGGTGCTTTGTTT...TGAAAGCGCTAAGGTCATTGGGAACACGAGACATACACCCAGCTGTTTGGGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000419769.6
3UTR-3UTR TCA 90 bp GCGGCAAGCTGGCCCAGCAGGTGGACGATAACGTTGATTCTTTCCAGAAGAGTCGAGACTCAAATATACTaGGGAGTTTCATCACTTCTT +
Preference number: 2 (lower is better)
Translates to: AASWPSRWTITLILSRRVETQIY*GVSSLL
Trigger: AAGAAGTGATGAAACTCCTCAGTATATTTGAGTCTC...GACTCTTCTGGAAAGAATCAACGTTATCGTCCACCTGCTGGGCCAGCTTGCCGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
3UTR-3UTR GCA 90 bp GCGGCGTCACCACTCTTAGGCTGGCCAAATTCTTCTATAAGCTCCTTCTGGATATTTTTCCACAACTGTTaGTCGGCAGCAGACACAGAT +
Preference number: 2 (lower is better)
Translates to: AASPLLGWPNSSISSFWIFFHNC*SAADTD
Trigger: ATCTGTGTCTGCTGCCGAGCAACAGTTGTGGAAAAA...TATCCAGAAGGAGCTTATAGAAGAATTTGGCCAGCCTAAGAGTGGTGACGCCGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
3UTR-3UTR GCA 90 bp GGCGTCACCACTCTTAGGCTGGCCAAATTCTTCTATAAGCTCCTTCTGGATAAGCAGCTGAAACAGCTTTaGGGCCTTGCTGTAATGAAG +
Preference number: 2 (lower is better)
Translates to: GVTTLRLAKFFYKLLLDKQLKQL*GLAVMK
Trigger: CTTCATTACAGCAAGGCCGCAAAGCTGTTTCAGCTG...CTTATCCAGAAGGAGCTTATAGAAGAATTTGGCCAGCCTAAGAGTGGTGACGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
3UTR-3UTR TCA 90 bp TTGAGGATTCATCTTCATATTTTAACGGGATTGGAGTGCTGGGGTCAGCTGCTGAAACAAAGCACCGAATaGACAAACCGGCTCCGTGTT +
Preference number: 2 (lower is better)
Translates to: LRIHLHILTGLECWGQLLKQSTE*TNRLRV
Trigger: AACACGGAGCCGGTTTGTTCATTCGGTGCTTTGTTT...CAGCAGCTGACCCCAGCACTCCAATCCCGTTAAAATATGAAGATGAATCCTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368815.6
3UTR-3UTR TCA 90 bp GTTCTCACCATTATATCAAGAGCCCCAGATAGTGTTTTCAACTTTCCAACATTGATGGAGGCCAGCCTGTaGTGGATGGTTGCAGCTCGA +
Preference number: 2 (lower is better)
Translates to: VLTIISRAPDSVFNFPTLMEASL*WMVAAR
Trigger: TCGAGCTGCAACCATCCATCACAGGCTGGCCTCCAT...CAATGTTGGAAAGTTGAAAACACTATCTGGGGCTCTTGATATAATGGTGAGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
3UTR-3UTR TCA 90 bp TTCATCACTTCTTCTCGATTGAGACTAGGAGAAGCATCAGCAGCTGCAGCGGCGAGCAGTTTAATGGACTaGAGGAGAAGAAATGACAAC +
Preference number: 2 (lower is better)
Translates to: FITSSRLRLGEASAAAAASSLMD*RRRNDN
Trigger: GTTGTCATTTCTTCTCCTTCAGTCCATTAAACTGCT...CGCCGCTGCAGCTGCTGATGCTTCTCCTAGTCTCAATCGAGAAGAAGTGATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
3UTR-3UTR GCA 90 bp AGGTGGACGATAACGTTGATTCTTTCCAGAAGAGTCGCGGTTTTATTTGCAGTTAGTGCTGGGGTCAGCTaGTGGAAGGTCGCTTTCTTT +
Preference number: 2 (lower is better)
Translates to: RWTITLILSRRVAVLFAVSAGVS*WKVAFF
Trigger: AAAGAAAGCGACCTTCCAGCAGCTGACCCCAGCACT...AACTGCAAATAAAACCGCGACTCTTCTGGAAAGAATCAACGTTATCGTCCACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
3UTR-3UTR GCA 90 bp TTCATCACTTCTTCTCGATTGAGACTAGGAGAAGCATCAGCAGCTGCAGCGGCGATAAGCTGGAATGCGTaGTCAGTTCTCACCATTATA +
Preference number: 2 (lower is better)
Translates to: FITSSRLRLGEASAAAAAISWNA*SVLTII
Trigger: TATAATGGTGAGAACTGAGCACGCATTCCAGCTTAT...CGCCGCTGCAGCTGCTGATGCTTCTCCTAGTCTCAATCGAGAAGAAGTGATGAA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
3UTR-3UTR CCA 90 bp TTCATCACTTCTTCTCGATTGAGACTAGGAGAAGCATCAGCAGCTGCAGCGGCGATTTCTGAAGACTCATaGCAGCATCGGACAAAACAT +
Preference number: 2 (lower is better)
Translates to: FITSSRLRLGEASAAAAAISEDS*QHRTKH
Trigger: ATGTTTTGTCCGATGCTGCCATGAGTCTTCAGAAAT...CGCCGCTGCAGCTGCTGATGCTTCTCCTAGTCTCAATCGAGAAGAAGTGATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
3UTR-3UTR CCA 90 bp TTTTCCACAACTGTTGCTCGGCAGCAGACACAGATTTGCTCACTAGTCTCTCACTGGGCCAGCATTAGTTaGATATCACCACAAAGTGTC +
Preference number: 2 (lower is better)
Translates to: FSTTVARQQTQICSLVSHWASIS*ISPQSV
Trigger: GACACTTTGTGGTGATATCCAACTAATGCTGGCCCA...GTGAGAGACTAGTGAGCAAATCTGTGTCTGCTGCCGAGCAACAGTTGTGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
3UTR-3UTR CCA 90 bp AGCATCTTTCAGCAGCTGAAACAGCTTTGCGGCCTTGCTGTAATGAAGATCTGCCAAATCCTTGGCAACTaGACTCTCTGTGAAGGCTAT +
Preference number: 2 (lower is better)
Translates to: SIFQQLKQLCGLAVMKICQILGN*TLCEGY
Trigger: ATAGCCTTCACAGAGAGTCCAGTTGCCAAGGATTTG...GCAGATCTTCATTACAGCAAGGCCGCAAAGCTGTTTCAGCTGCTGAAAGATGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
3UTR-3UTR CCA 90 bp CAAGAGCCCCAGATAGTGTTTTCAACTTTCCAACATTGCTATTCTGACTGGTCACCAGCCTGTGATGGATaGTTGCAGCTCGATACTGAC +
Preference number: 2 (lower is better)
Translates to: QEPQIVFSTFQHCYSDWSPACDG*LQLDTD
Trigger: GTCAGTATCGAGCTGCAACCATCCATCACAGGCTGG...TGACCAGTCAGAATAGCAATGTTGGAAAGTTGAAAACACTATCTGGGGCTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
3UTR-3UTR TCA 90 bp CCCGTGTTACATAATAAAAGGGCGGCATTGGTGGCATCCTCAATTGATTCAAAGCTCGGGACCCCCTCTTaGGGATTCATCTTCATATTT +
Preference number: 2 (lower is better)
Translates to: PVLHNKRAALVASSIDSKLGTPS*GFIFIF
Trigger: AAATATGAAGATGAATCCTCAAGAGGGGGTCCCGAG...CTTTGAATCAATTGAGGATGCCACCAATGCCGCCCTTTTATTATGTAACACGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
3UTR-3UTR GCA 90 bp GCAACTGGACTCTCTGTGAAGGCTATGCAGGATCTCCTGGTCTTCTTTTGTTTGTGTAGACAAATCAGTTaGCCATGCAAATCCTTGGCA +
Preference number: 2 (lower is better)
Translates to: ATGLSVKAMQDLLVFFCLCRQIS*PCKSLA
Trigger: TGCCAAGGATTTGCATGGGCAACTGATTTGTCTACA...CAAACAAAAGAAGACCAGGAGATCCTGCATAGCCTTCACAGAGAGTCCAGTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
3UTR-3UTR GCA 90 bp AGCGGCGTCACCACTCTTAGGCTGGCCAAATTCTTCTATAAGCTCCTTCTGGATTGTAGACAAATCAGTTaGCCATGCAAATCCTTCAGA +
Preference number: 2 (lower is better)
Translates to: SGVTTLRLAKFFYKLLLDCRQIS*PCKSFR
Trigger: TCTGAAGGATTTGCATGGGCAACTGATTTGTCTACA...ATCCAGAAGGAGCTTATAGAAGAATTTGGCCAGCCTAAGAGTGGTGACGCCGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419769.6
3UTR-3UTR TCA 90 bp GGCGTCACCACTCTTAGGCTGGCCAAATTCTTCTATAAGCTCCTTCTGGATAAGCAACTAACAGAGAGTTaGCTTTCTAAGTCTGTAGAC +
Preference number: 2 (lower is better)
Translates to: GVTTLRLAKFFYKLLLDKQLTES*LSKSVD
Trigger: GTCTACAGACTTAGAAAGTCAACTCTCTGTTAGTTG...CTTATCCAGAAGGAGCTTATAGAAGAATTTGGCCAGCCTAAGAGTGGTGACGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
3UTR-3UTR TCA 90 bp GTTGATTCTTTCCAGAAGAGTCGCGGTTTTATTTGCAGTTGCTCTCAAAAGCTGCTGTCGAGCAGACACTaGATCCACATCGCAGTATTT +
Preference number: 2 (lower is better)
Translates to: VDSFQKSRGFICSCSQKLLSSRH*IHIAVF
Trigger: AAATACTGCGATGTGGATTCAGTGTCTGCTCGACAG...CAGCTTTTGAGAGCAACTGCAAATAAAACCGCGACTCTTCTGGAAAGAATCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
3UTR-3UTR GCA 90 bp CAAGAGCCCCAGATAGTGTTTTCAACTTTCCAACATTGCTATTCTGACTGGTCACCTGTGATGGATGGTTaGAGCTCGATACTGACAAAG +
Preference number: 2 (lower is better)
Translates to: QEPQIVFSTFQHCYSDWSPVMDG*SSILTK
Trigger: CTTTGTCAGTATCGAGCTGCAACCATCCATCACAGG...TGACCAGTCAGAATAGCAATGTTGGAAAGTTGAAAACACTATCTGGGGCTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
3UTR-3UTR GCA 90 bp GCCCAGCAGGTGGACGATAACGTTGATTCTTTCCAGAAGAGTCGCGGTTTTATTCATCTTCGATGTTATTaGTTTGGCCTAACAAACTGC +
Preference number: 2 (lower is better)
Translates to: AQQVDDNVDSFQKSRGFIHLRCY*FGLTNC
Trigger: GCAGTTTGTTAGGCCAAAGCAATAACATCGAAGATG...AATAAAACCGCGACTCTTCTGGAAAGAATCAACGTTATCGTCCACCTGCTGGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525358.1
3UTR-3UTR CCA 90 bp TTTTCCACAACTGTTGCTCGGCAGCAGACACAGATTTGCTCACTAGTCTCTCACATTTCTGAAGACTCATaGCAGCATCGGACAAAACAT +
Preference number: 2 (lower is better)
Translates to: FSTTVARQQTQICSLVSHISEDS*QHRTKH
Trigger: ATGTTTTGTCCGATGCTGCCATGAGTCTTCAGAAAT...GTGAGAGACTAGTGAGCAAATCTGTGTCTGCTGCCGAGCAACAGTTGTGGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
3UTR-3UTR CCA 90 bp ATTCTTTCCAGAAGAGTCGCGGTTTTATTTGCAGTTGCTCTCAAAAGCTGGGAGAAAGGGCGGCATTGGTaGCATCCTCAATTGATTCAA +
Preference number: 2 (lower is better)
Translates to: ILSRRVAVLFAVALKSWEKGRHW*HPQLIQ
Trigger: TTGAATCAATTGAGGATGCCACCAATGCCGCCCTTT...CTCCCAGCTTTTGAGAGCAACTGCAAATAAAACCGCGACTCTTCTGGAAAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
3UTR-3UTR CCA 90 bp CATTCCAGATTGACTGGAATAATTGCCCTTCTGAAGGGAGCCCATTTTGTCCAACGCTCTTCTGTGTCATaGCAAACTGGAAATGCACAA +
Preference number: 2 (lower is better)
Translates to: HSRLTGIIALLKGAHFVQRSSVS*QTGNAQ
Trigger: TTGTGCATTTCCAGTTTGCCATGACACAGAAGAGCG...TTGGACAAAATGGGCTCCCTTCAGAAGGGCAATTATTCCAGTCAATCTGGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481600.5
3UTR CAA 90 bp CTGAAGTTTCATTTTATGTTGCCAAGAGCCAGGGATCATTCCAGATaGACTGGAATAATTGCCCTTCTGAAGGGAGCCCATTTTGTCCAA +
Preference number: 2 (lower is better)
Translates to: LKFHFMLPRARDHSR*TGIIALLKGAHFVQ
Trigger: TTGGACAAAATGGGCTCCCTTCAGAAGGGCAATTATTCCAGTCAATCTGGAATGATCCCTGGCTCTTGGCAACATAAAATGAAACTTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
3UTR-3UTR GCA 90 bp CAAGAGCCCCAGATAGTGTTTTCAACTTTCCAACATTGCTATTCTGACTGGTCAATTGACTGGAATAATTaGCCTTCTGAAGGGAGCCCA +
Preference number: 2 (lower is better)
Translates to: QEPQIVFSTFQHCYSDWSIDWNN*PSEGSP
Trigger: TGGGCTCCCTTCAGAAGGGCAATTATTCCAGTCAAT...TGACCAGTCAGAATAGCAATGTTGGAAAGTTGAAAACACTATCTGGGGCTCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
3UTR-3UTR GCA 90 bp GGCGTCACCACTCTTAGGCTGGCCAAATTCTTCTATAAGCTCCTTCTGGATAAGAGTTTCATTTTATGTTaGCAAGAGCCAGGGATCATT +
Preference number: 2 (lower is better)
Translates to: GVTTLRLAKFFYKLLLDKSFILC*QEPGII
Trigger: AATGATCCCTGGCTCTTGGCAACATAAAATGAAACT...CTTATCCAGAAGGAGCTTATAGAAGAATTTGGCCAGCCTAAGAGTGGTGACGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
3UTR-3UTR GCA 90 bp CTCTTAGGCTGGCCAAATTCTTCTATAAGCTCCTTCTGGATAAGCTGGAATGCGCTCTTCAAGGTGTGCTaGTCTATTATTTGCATTCTG +
Preference number: 2 (lower is better)
Translates to: LLGWPNSSISSFWISWNALFKVC*SIICIL
Trigger: CAGAATGCAAATAATAGAGCAGCACACCTTGAAGAG...CGCATTCCAGCTTATCCAGAAGGAGCTTATAGAAGAATTTGGCCAGCCTAAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
3UTR-3UTR CCA 90 bp CAAGAGCCCCAGATAGTGTTTTCAACTTTCCAACATTGCTATTCTGACTGGTCACTTCGGAAAGCATATTaGTGCAGAGGCAGCAATAAG +
Preference number: 2 (lower is better)
Translates to: QEPQIVFSTFQHCYSDWSLRKAY*CRGSNK
Trigger: CTTATTGCTGCCTCTGCACCAATATGCTTTCCGAAG...TGACCAGTCAGAATAGCAATGTTGGAAAGTTGAAAACACTATCTGGGGCTCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
3UTR-3UTR CCA 90 bp CAAGAGCCCCAGATAGTGTTTTCAACTTTCCAACATTGCTATTCTGACTGGTCACAAATCCTTGGCAACTaGACTCTCTGTGAAGGCTAT +
Preference number: 2 (lower is better)
Translates to: QEPQIVFSTFQHCYSDWSQILGN*TLCEGY
Trigger: ATAGCCTTCACAGAGAGTCCAGTTGCCAAGGATTTG...TGACCAGTCAGAATAGCAATGTTGGAAAGTTGAAAACACTATCTGGGGCTCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
3UTR-3UTR GCA 90 bp CTTCTGGATAAGCTGGAATGCGTGCTCAGTTCTCACCATTATATCAAGAGCCCCAAACTCTTCAAGGTGTaGTGCTCTATTATTTGCATT +
Preference number: 2 (lower is better)
Translates to: LLDKLECVLSSHHYIKSPKLFKV*CSIICI
Trigger: AATGCAAATAATAGAGCAGCACACCTTGAAGAGTTT...GGGGCTCTTGATATAATGGTGAGAACTGAGCACGCATTCCAGCTTATCCAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
3UTR-3UTR GCA 90 bp TCAGCTGAAGTTTCATTTTATGTTGCCAAGAGCCAGGGATCATTCCAGATTGACTGTAGACAAATCAGTTaGCCATGCAAATCCTTGGCA +
Preference number: 2 (lower is better)
Translates to: SAEVSFYVAKSQGSFQIDCRQIS*PCKSLA
Trigger: TGCCAAGGATTTGCATGGGCAACTGATTTGTCTACA...GTCAATCTGGAATGATCCCTGGCTCTTGGCAACATAAAATGAAACTTCAGCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
3UTR-3UTR TCA 90 bp CAAGTGAAGAAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTAAACAAAGCACCGAATaGACAAACCGGCTCCGTGTT +
Preference number: 2 (lower is better)
Translates to: QVKKPQNSTVICLSLKITKQSTE*TNRLRV
Trigger: AACACGGAGCCGGTTTGTTCATTCGGTGCTTTGTTT...AGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTTCTTCACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
3UTR-3UTR TCA 90 bp TGTATCGTAATGCTCTTCCGTATTTCTGAAGACTCATGGCAGCATCGGACAAAACAACTAACAGAGAGTTaGCTTTCTAAGTCTGTAGAC +
Preference number: 2 (lower is better)
Translates to: CIVMLFRISEDSWQHRTKQLTES*LSKSVD
Trigger: GTCTACAGACTTAGAAAGTCAACTCTCTGTTAGTTG...TTTTGTCCGATGCTGCCATGAGTCTTCAGAAATACGGAAGAGCATTACGATACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
3UTR-3UTR GCA 90 bp TGGAATGCGTGCTCAGTTCTCACCATTATATCAAGAGCCCCAGATAGTGTTTTCAGTTTCATTTTATGTTaGCAAGAGCCAGGGATCATT +
Preference number: 2 (lower is better)
Translates to: WNACSVLTIISRAPDSVFSFILC*QEPGII
Trigger: AATGATCCCTGGCTCTTGGCAACATAAAATGAAACT...GAAAACACTATCTGGGGCTCTTGATATAATGGTGAGAACTGAGCACGCATTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
3UTR-3UTR CCA 90 bp CCGTGTTACATAATAAAAGGGCGGCATTGGTGGCATCCTCAATTGATTCAAAGTACACATCACAAGCTCTaGCACATTGCATATCAAGTT +
Preference number: 2 (lower is better)
Translates to: PCYIIKGRHWWHPQLIQSTHHKL*HIAYQV
Trigger: AACTTGATATGCAATGTGCCAGAGCTTGTGATGTGT...ACTTTGAATCAATTGAGGATGCCACCAATGCCGCCCTTTTATTATGTAACACGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481600.5
3UTR-3UTR CCA 90 bp GTTCTCACCATTATATCAAGAGCCCCAGATAGTGTTTTCAACTTTCCAACATTGTGTGTCATGGCAAACTaGAAATGCACAACTGGGTCT +
Preference number: 2 (lower is better)
Translates to: VLTIISRAPDSVFNFPTLCVMAN*KCTTGS
Trigger: AGACCCAGTTGTGCATTTCCAGTTTGCCATGACACA...CAATGTTGGAAAGTTGAAAACACTATCTGGGGCTCTTGATATAATGGTGAGAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481600.5
3UTR CAA 90 bp CTTTTGTTTGGTAATGAAACTCTTCAAGGTGTGCTGCTCTATTATTaGCATTCTGGGCCAGCATTAGTTGGATATCACCACAAAGTGTCA +
Preference number: 2 (lower is better)
Translates to: LLFGNETLQGVLLYY*HSGPALVGYHHKVS
Trigger: TGACACTTTGTGGTGATATCCAACTAATGCTGGCCCAGAATGCAAATAATAGAGCAGCACACCTTGAAGAGTTTCATTACCAAACAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
3UTR CAA 90 bp AGCAACCTTGTACAAGAGAATGGCTACCGGCATTGTGAATGGATTTaGGTATTTGTCTTCAGTTTCTTCACAAAGAGTAGTGAGGTCATA +
Preference number: 2 (lower is better)
Translates to: SNLVQENGYRHCEWI*VFVFSFFTKSSEVI
Trigger: TATGACCTCACTACTCTTTGTGAAGAAACTGAAGACAAATACCAAAATCCATTCACAATGCCGGTAGCCATTCTCTTGTACAAGGTTGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481600.5
ENST00000530795.1
3UTR-3UTR GCA 90 bp TCAGCTGAAGTTTCATTTTATGTTGCCAAGAGCCAGGGATCATTCCAGATTGACTTCAAGTCACTAAACTaGAAGATTTCATTAGCAGCC +
Preference number: 2 (lower is better)
Translates to: SAEVSFYVAKSQGSFQIDFKSLN*KISLAA
Trigger: GGCTGCTAATGAAATCTTGCAGTTTAGTGACTTGAA...GTCAATCTGGAATGATCCCTGGCTCTTGGCAACATAAAATGAAACTTCAGCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
3UTR-3UTR CCA 90 bp AAAGGGCGGCATTGGTGGCATCCTCAATTGATTCAAAGTTGTGAATTCCCTTTTTCATTCCAGATTGACTaGAATAATTGCCCTTCTGAA +
Preference number: 2 (lower is better)
Translates to: KGRHWWHPQLIQSCEFPFSFQID*NNCPSE
Trigger: TTCAGAAGGGCAATTATTCCAGTCAATCTGGAATGA...AAAAGGGAATTCACAACTTTGAATCAATTGAGGATGCCACCAATGCCGCCCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
3UTR-3UTR TCA 90 bp GTGGAAGCTTTAAGTTTGATTCTGATGTTAGCACTTCAAGTGAAGAAGCCACAGACTCTGTGTTTCCACTaGTATACCTGTTTTAAATGG +
Preference number: 2 (lower is better)
Translates to: VEALSLILMLALQVKKPQTLCFH*YTCFKW
Trigger: CCATTTAAAACAGGTATATCAGTGGAAACACAGAGT...CTGTGGCTTCTTCACTTGAAGTGCTAACATCAGAATCAAACTTAAAGCTTCCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
3UTR-3UTR GCA 90 bp GTAAATGTGCTTGTTGGTTTTGAGAATTGTGTCATCTTCGATGTTATTGCTTGTCAGCAGACACAGATTTaGTCACTAGTCTCTCACTCT +
Preference number: 2 (lower is better)
Translates to: VNVLVGFENCVIFDVIACQQTQI*SLVSHS
Trigger: AGAGTGAGAGACTAGTGAGCAAATCTGTGTCTGCTG...ACAAGCAATAACATCGAAGATGACACAATTCTCAAAACCAACAAGCACATTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
3UTR-3UTR TCA 90 bp CCATTATATCAAGAGCCCCAGATAGTGTTTTCAACTTTCCAACATTGCTATTCTCAACTAACAGAGAGTTaGCTTTCTAAGTCTGTAGAC +
Preference number: 2 (lower is better)
Translates to: PLYQEPQIVFSTFQHCYSQLTES*LSKSVD
Trigger: GTCTACAGACTTAGAAAGTCAACTCTCTGTTAGTTG...AGAATAGCAATGTTGGAAAGTTGAAAACACTATCTGGGGCTCTTGATATAATGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
3UTR-3UTR GCA 90 bp ACCATTATATCAAGAGCCCCAGATAGTGTTTTCAACTTTCCAACATTGCTATTCCTCTTCAAGGTGTGCTaGTCTATTATTTGCATTCTG +
Preference number: 2 (lower is better)
Translates to: TIISRAPDSVFNFPTLLFLFKVC*SIICIL
Trigger: CAGAATGCAAATAATAGAGCAGCACACCTTGAAGAG...GAATAGCAATGTTGGAAAGTTGAAAACACTATCTGGGGCTCTTGATATAATGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
3UTR-3UTR GCA 90 bp AGGAGAAGAAATGACAACCGAGACTCAAATATACTGAGGAGTTTCATCACTTCTTCTTCATCATCATGTTaGAAGCAACCTTGTACAAGA +
Preference number: 2 (lower is better)
Translates to: RRRNDNRDSNILRSFITSSSSSC*KQPCTR
Trigger: TCTTGTACAAGGTTGCTTGCAACATGATGATGAAGA...AGAAGTGATGAAACTCCTCAGTATATTTGAGTCTCGGTTGTCATTTCTTCTCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481600.5
3UTR GCA 72 bp GGCTCTGTGCAGTCACTGAACGGCATTGCTGCTCGCTaGACTGCCGGCGGCAAGCTGGCCCAGCAGGTGGAC +
Preference number: 3 (lower is better)
Translates to: GSVQSLNGIAAR*TAGGKLAQQVD
Trigger: GTCCACCTGCTGGGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAATGCCGTTCAGTGACTGCACAGAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
ENST00000525358.1
3UTR GCA 72 bp GGGACACGGCTCTGTGCAGTCACTGAACGGCATTGCTaGTCGCTGCACTGCCGGCGGCAAGCTGGCCCAGCA +
Preference number: 3 (lower is better)
Translates to: GTRLCAVTERHC*SLHCRRQAGPA
Trigger: TGCTGGGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAATGCCGTTCAGTGACTGCACAGAGCCGTGTCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
ENST00000525358.1
3UTR GCA 72 bp TCTGGGACACGGCTCTGTGCAGTCACTGAACGGCATTaGTGCTCGCTGCACTGCCGGCGGCAAGCTGGCCCA +
Preference number: 3 (lower is better)
Translates to: SGTRLCAVTERH*CSLHCRRQAGP
Trigger: TGGGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAATGCCGTTCAGTGACTGCACAGAGCCGTGTCCCAGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
ENST00000525358.1
3UTR-3UTR CAA 90 bp GCATTGCTGCTCGCTGCACTGCCGGCGGCAAGCTGGCCCAGCAGGTGGACGATACAAACCGGCTCCGTGTaGAAGGCACTGACAGCGTGT +
Preference number: 3 (lower is better)
Translates to: ALLLAALPAASWPSRWTIQTGSV*KALTAC
Trigger: ACACGCTGTCAGTGCCTTCAACACGGAGCCGGTTTG...TATCGTCCACCTGCTGGGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAATGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000525358.1
3UTR-3UTR CAA 90 bp GTGCAGTCACTGAACGGCATTGCTGCTCGCTGCACTGCCGGCGGCAAGCTGGCCCAAACCGGCTCCGTGTaGAAGGCACTGACAGCGTGT +
Preference number: 3 (lower is better)
Translates to: VQSLNGIAARCTAGGKLAQTGSV*KALTAC
Trigger: ACACGCTGTCAGTGCCTTCAACACGGAGCCGGTTTG...GGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAATGCCGTTCAGTGACTGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000525358.1
3UTR-3UTR CAA 90 bp CGGCATTGCTGCTCGCTGCACTGCCGGCGGCAAGCTGGCCCAGCAGGTGGACGAGCAGCAGACACAGATTaGCTCACTAGTCTCTCACTC +
Preference number: 3 (lower is better)
Translates to: RHCCSLHCRRQAGPAGGRAADTD*LTSLSL
Trigger: GAGTGAGAGACTAGTGAGCAAATCTGTGTCTGCTGC...TCGTCCACCTGCTGGGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAATGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
3UTR CCA 72 bp CTCGCTGCACTGCCGGCGGCAAGCTGGCCCAGCAGGTaGACGATAACGTTGATTCTTTCCAGAAGAGTCGCG +
Preference number: 3 (lower is better)
Translates to: LAALPAASWPSR*TITLILSRRVA
Trigger: CGCGACTCTTCTGGAAAGAATCAACGTTATCGTCCACCTGCTGGGCCAGCTTGCCGCCGGCAGTGCAGCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
ENST00000525358.1
3UTR CCA 72 bp ACGGCATTGCTGCTCGCTGCACTGCCGGCGGCAAGCTaGCCCAGCAGGTGGACGATAACGTTGATTCTTTCC +
Preference number: 3 (lower is better)
Translates to: TALLLAALPAAS*PSRWTITLILS
Trigger: GGAAAGAATCAACGTTATCGTCCACCTGCTGGGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAATGCCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
ENST00000525358.1
3UTR-3UTR CAA 90 bp CACGGCTCTGTGCAGTCACTGAACGGCATTGCTGCTCGCTGCACTGCCGGCGGCGCAGCAGACACAGATTaGCTCACTAGTCTCTCACTC +
Preference number: 3 (lower is better)
Translates to: HGSVQSLNGIAARCTAGGAADTD*LTSLSL
Trigger: GAGTGAGAGACTAGTGAGCAAATCTGTGTCTGCTGC...GCCGCCGGCAGTGCAGCGAGCAGCAATGCCGTTCAGTGACTGCACAGAGCCGTG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
3UTR-3UTR CAA 90 bp ACACGGCTCTGTGCAGTCACTGAACGGCATTGCTGCTCGCTGCACTGCCGGCGGCATATTTTAACGGGATaGGAGTGCTGGGGTCAGCTG +
Preference number: 3 (lower is better)
Translates to: TRLCAVTERHCCSLHCRRHILTG*ECWGQL
Trigger: CAGCTGACCCCAGCACTCCAATCCCGTTAAAATATG...CCGCCGGCAGTGCAGCGAGCAGCAATGCCGTTCAGTGACTGCACAGAGCCGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
3UTR-3UTR CAA 90 bp GCATTGCTGCTCGCTGCACTGCCGGCGGCAAGCTGGCCCAGCAGGTGGACGATAACAAGCTCTGGCACATaGCATATCAAGTTGTCCAAC +
Preference number: 3 (lower is better)
Translates to: ALLLAALPAASWPSRWTITSSGT*HIKLSN
Trigger: GTTGGACAACTTGATATGCAATGTGCCAGAGCTTGT...TATCGTCCACCTGCTGGGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481600.5
3UTR-3UTR CAA 90 bp TCACTGAACGGCATTGCTGCTCGCTGCACTGCCGGCGGCAAGCTGGCCCAGCAGAGGTCGCTTTCTTTTTaGATGCTGCTATCGACAGAT +
Preference number: 3 (lower is better)
Translates to: SLNGIAARCTAGGKLAQQRSLSF*MLLSTD
Trigger: ATCTGTCGATAGCAGCATCAAAAAAGAAAGCGACCT...CTGCTGGGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAATGCCGTTCAGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
3UTR-3UTR CAA 90 bp CCTCAGACAGCTGTGGTACATGGAGGCCAGCCTGTGATGGATGGTTGCAGCTCGTGCCAGCACCCGGTGTaGTTTCCTAAGGTGTTCATC +
Preference number: 3 (lower is better)
Translates to: PQTAVVHGGQPVMDGCSSCQHPV*FPKVFI
Trigger: GATGAACACCTTAGGAAACAACACCGGGTGCTGGCA...CGAGCTGCAACCATCCATCACAGGCTGGCCTCCATGTACCACAGCTGTCTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
3UTR TCA 72 bp CCCCTGCACCACAGTGGGCCTGCGCACAAATCCGCATaGGCCTTCCCGTGTTACATAATAAAAGGGCGGCAT +
Preference number: 3 (lower is better)
Translates to: PLHHSGPAHKSA*AFPCYIIKGRH
Trigger: ATGCCGCCCTTTTATTATGTAACACGGGAAGGCTCATGCGGATTTGTGCGCAGGCCCACTGTGGTGCAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
3UTR GCA 72 bp GCTGTGGTACATGGAGGCCAGCCTGTGATGGATGGTTaGAGCTCGATACTGACAAAGGGGCTGTCGAGCAGA +
Preference number: 3 (lower is better)
Translates to: AVVHGGQPVMDG*SSILTKGLSSR
Trigger: TCTGCTCGACAGCCCCTTTGTCAGTATCGAGCTGCAACCATCCATCACAGGCTGGCCTCCATGTACCACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
3UTR CCA 72 bp GACAGCTGTGGTACATGGAGGCCAGCCTGTGATGGATaGTTGCAGCTCGATACTGACAAAGGGGCTGTCGAG +
Preference number: 3 (lower is better)
Translates to: DSCGTWRPACDG*LQLDTDKGAVE
Trigger: CTCGACAGCCCCTTTGTCAGTATCGAGCTGCAACCATCCATCACAGGCTGGCCTCCATGTACCACAGCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
3UTR GCA 72 bp TCACGTTTCAGTTCATCCCCTGCACCACAGTGGGCCTaGGCACAAATCCGCATGAGCCTTCCCGTGTTACAT +
Preference number: 3 (lower is better)
Translates to: SRFSSSPAPQWA*AQIRMSLPVLH
Trigger: ATGTAACACGGGAAGGCTCATGCGGATTTGTGCGCAGGCCCACTGTGGTGCAGGGGATGAACTGAAACGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
3UTR CCA 72 bp GAAAATTCACGTTTCAGTTCATCCCCTGCACCACAGTaGGCCTGCGCACAAATCCGCATGAGCCTTCCCGTG +
Preference number: 3 (lower is better)
Translates to: ENSRFSSSPAPQ*ACAQIRMSLPV
Trigger: CACGGGAAGGCTCATGCGGATTTGTGCGCAGGCCCACTGTGGTGCAGGGGATGAACTGAAACGTGAATTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
3UTR-3UTR CAA 90 bp CGGCTCTGTGCAGTCACTGAACGGCATTGCTGCTCGCTGCACTGCCGGCGGCAATGGTGGCATCCTCAATaGATTCAAAGTTGTGAATTC +
Preference number: 3 (lower is better)
Translates to: RLCAVTERHCCSLHCRRQWWHPQ*IQSCEF
Trigger: GAATTCACAACTTTGAATCAATTGAGGATGCCACCA...TTGCCGCCGGCAGTGCAGCGAGCAGCAATGCCGTTCAGTGACTGCACAGAGCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
3UTR-3UTR CAA 90 bp GCAGCTGAAACAGCTTTGCGGCCTTGCTGTAATGAAGATCTGCCAGCACCCGGTTGCCAGCACCCGGTGTaGTTTCCTAAGGTGTTCATC +
Preference number: 3 (lower is better)
Translates to: AAETALRPCCNEDLPAPGCQHPV*FPKVFI
Trigger: GATGAACACCTTAGGAAACAACACCGGGTGCTGGCA...ACCGGGTGCTGGCAGATCTTCATTACAGCAAGGCCGCAAAGCTGTTTCAGCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
3UTR-3UTR CAA 90 bp CGGCTCTGTGCAGTCACTGAACGGCATTGCTGCTCGCTGCACTGCCGGCGGCAATCATCTTCGATGTTATaGCTTTGGCCTAACAAACTG +
Preference number: 3 (lower is better)
Translates to: RLCAVTERHCCSLHCRRQSSSML*LWPNKL
Trigger: CAGTTTGTTAGGCCAAAGCAATAACATCGAAGATGA...TTGCCGCCGGCAGTGCAGCGAGCAGCAATGCCGTTCAGTGACTGCACAGAGCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525358.1
3UTR GCA 72 bp TTCGCAGGGAGCATCTTTCAGCAGCTGAAACAGCTTTaGGGCCTTGCTGTAATGAAGATCTGCCAGCACCCG +
Preference number: 3 (lower is better)
Translates to: FAGSIFQQLKQL*GLAVMKICQHP
Trigger: CGGGTGCTGGCAGATCTTCATTACAGCAAGGCCGCAAAGCTGTTTCAGCTGCTGAAAGATGCTCCCTGCGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
3UTR CCA 72 bp CATCACCAACCTGATTCCTCAGACAGCTGTGGTACATaGAGGCCAGCCTGTGATGGATGGTTGCAGCTCGAT +
Preference number: 3 (lower is better)
Translates to: HHQPDSSDSCGT*RPACDGWLQLD
Trigger: ATCGAGCTGCAACCATCCATCACAGGCTGGCCTCCATGTACCACAGCTGTCTGAGGAATCAGGTTGGTGATG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
3UTR-3UTR CAA 90 bp GCTGTGGTACATGGAGGCCAGCCTGTGATGGATGGTTGCAGCTCGATACTGACACCTCGGGACCCCCTCTaGAGGATTCATCTTCATATT +
Preference number: 3 (lower is better)
Translates to: AVVHGGQPVMDGCSSILTPRDPL*RIHLHI
Trigger: AATATGAAGATGAATCCTCAAGAGGGGGTCCCGAGG...TGTCAGTATCGAGCTGCAACCATCCATCACAGGCTGGCCTCCATGTACCACAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
3UTR-3UTR CAA 90 bp TCTCGATTGAGACTAGGAGAAGCATCAGCAGCTGCAGCGGCGTCACCACTCTTATGCCCATGCAAATCCTaGGCAACTGGACTCTCTGTG +
Preference number: 3 (lower is better)
Translates to: SRLRLGEASAAAAASPLLCPCKS*ATGLSV
Trigger: CACAGAGAGTCCAGTTGCCAAGGATTTGCATGGGCA...TAAGAGTGGTGACGCCGCTGCAGCTGCTGATGCTTCTCCTAGTCTCAATCGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
3UTR-3UTR CAA 90 bp CGGCTCTGTGCAGTCACTGAACGGCATTGCTGCTCGCTGCACTGCCGGCGGCAAATTATAGCTACTGCTTaGCTATCATCTGATGGATCA +
Preference number: 3 (lower is better)
Translates to: RLCAVTERHCCSLHCRRQIIATA*LSSDGS
Trigger: TGATCCATCAGATGATAGCAAAGCAGTAGCTATAAT...TTGCCGCCGGCAGTGCAGCGAGCAGCAATGCCGTTCAGTGACTGCACAGAGCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481600.5
3UTR GCA 72 bp TTCTTCTCGATTGAGACTAGGAGAAGCATCAGCAGCTaGAGCGGCGTCACCACTCTTAGGCTGGCCAAATTC +
Preference number: 3 (lower is better)
Translates to: FFSIETRRSISS*SGVTTLRLAKF
Trigger: GAATTTGGCCAGCCTAAGAGTGGTGACGCCGCTGCAGCTGCTGATGCTTCTCCTAGTCTCAATCGAGAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
3UTR-3UTR CAA 90 bp GGATGGTTGCAGCTCGATACTGACAAAGGGGCTGTCGAGCAGACACTGAATCCACATATTTTAACGGGATaGGAGTGCTGGGGTCAGCTG +
Preference number: 3 (lower is better)
Translates to: GWLQLDTDKGAVEQTLNPHILTG*ECWGQL
Trigger: CAGCTGACCCCAGCACTCCAATCCCGTTAAAATATG...TGGATTCAGTGTCTGCTCGACAGCCCCTTTGTCAGTATCGAGCTGCAACCATCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
3UTR-3UTR CAA 90 bp AAGGCACTGACAGCGTGTCTGGGACACGGCTCTGTGCAGTCACTGAACGGCATTAATAAAAGGGCGGCATaGGTGGCATCCTCAATTGAT +
Preference number: 3 (lower is better)
Translates to: KALTACLGHGSVQSLNGINKRAA*VASSID
Trigger: ATCAATTGAGGATGCCACCAATGCCGCCCTTTTATT...AATGCCGTTCAGTGACTGCACAGAGCCGTGTCCCAGACACGCTGTCAGTGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
3UTR GCA 72 bp GAGCATCTTTCAGCAGCTGAAACAGCTTTGCGGCCTTaGTGTAATGAAGATCTGCCAGCACCCGGTGTTGTT +
Preference number: 3 (lower is better)
Translates to: EHLSAAETALRP*CNEDLPAPGVV
Trigger: AACAACACCGGGTGCTGGCAGATCTTCATTACAGCAAGGCCGCAAAGCTGTTTCAGCTGCTGAAAGATGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
3UTR GCA 72 bp CTGAAACAGCTTTGCGGCCTTGCTGTAATGAAGATCTaGCAGCACCCGGTGTTGTTTCCTAAGGTGTTCATC +
Preference number: 3 (lower is better)
Translates to: LKQLCGLAVMKI*QHPVLFPKVFI
Trigger: GATGAACACCTTAGGAAACAACACCGGGTGCTGGCAGATCTTCATTACAGCAAGGCCGCAAAGCTGTTTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
3UTR-3UTR CAA 90 bp GCAACTGGACTCTCTGTGAAGGCTATGCAGGATCTCCTGGTCTTCTTTTGTTTGCCTCGGGACCCCCTCTaGAGGATTCATCTTCATATT +
Preference number: 3 (lower is better)
Translates to: ATGLSVKAMQDLLVFFCLPRDPL*RIHLHI
Trigger: AATATGAAGATGAATCCTCAAGAGGGGGTCCCGAGG...CAAACAAAAGAAGACCAGGAGATCCTGCATAGCCTTCACAGAGAGTCCAGTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
3UTR-3UTR CAA 90 bp GCAGCTGAAACAGCTTTGCGGCCTTGCTGTAATGAAGATCTGCCAGCACCCGGTAAGTTTCATTTTATGTaGCCAAGAGCCAGGGATCAT +
Preference number: 3 (lower is better)
Translates to: AAETALRPCCNEDLPAPGKFHFM*PRARDH
Trigger: ATGATCCCTGGCTCTTGGCAACATAAAATGAAACTT...ACCGGGTGCTGGCAGATCTTCATTACAGCAAGGCCGCAAAGCTGTTTCAGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
3UTR-3UTR CAA 90 bp CAGCTGAAACAGCTTTGCGGCCTTGCTGTAATGAAGATCTGCCAGCACCCGGTGTGGTGGCATCCTCAATaGATTCAAAGTTGTGAATTC +
Preference number: 3 (lower is better)
Translates to: QLKQLCGLAVMKICQHPVWWHPQ*IQSCEF
Trigger: GAATTCACAACTTTGAATCAATTGAGGATGCCACCA...CACCGGGTGCTGGCAGATCTTCATTACAGCAAGGCCGCAAAGCTGTTTCAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
3UTR TCA 72 bp GTTGCCCATGCAAATCCTTGGCAACTGGACTCTCTGTaGAGGCTATGCAGGATCTCCTGGTCTTCTTTTGTT +
Preference number: 3 (lower is better)
Translates to: VAHANPWQLDSL*RLCRISWSSFV
Trigger: AACAAAAGAAGACCAGGAGATCCTGCATAGCCTTCACAGAGAGTCCAGTTGCCAAGGATTTGCATGGGCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
3UTR-3UTR CAA 90 bp GTGGAAGCTTTAAGTTTGATTCTGATGTTAGCACTTCAAGTGAAGAAGCCACAGCAAACCGGCTCCGTGTaGAAGGCACTGACAGCGTGT +
Preference number: 3 (lower is better)
Translates to: VEALSLILMLALQVKKPQQTGSV*KALTAC
Trigger: ACACGCTGTCAGTGCCTTCAACACGGAGCCGGTTTG...CTGTGGCTTCTTCACTTGAAGTGCTAACATCAGAATCAAACTTAAAGCTTCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
3UTR-3UTR CAA 90 bp CACCCGGTGTTGTTTCCTAAGGTGTTCATCACCAACCTGATTCCTCAGACAGCTAGGGATCATTCCAGATaGACTGGAATAATTGCCCTT +
Preference number: 3 (lower is better)
Translates to: HPVLFPKVFITNLIPQTARDHSR*TGIIAL
Trigger: AAGGGCAATTATTCCAGTCAATCTGGAATGATCCCT...AGCTGTCTGAGGAATCAGGTTGGTGATGAACACCTTAGGAAACAACACCGGGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
3UTR-3UTR CAA 90 bp TGGAATGCGTGCTCAGTTCTCACCATTATATCAAGAGCCCCAGATAGTGTTTTCGCCTGTGATGGATGGTaGCAGCTCGATACTGACAAA +
Preference number: 3 (lower is better)
Translates to: WNACSVLTIISRAPDSVFACDGW*QLDTDK
Trigger: TTTGTCAGTATCGAGCTGCAACCATCCATCACAGGC...GAAAACACTATCTGGGGCTCTTGATATAATGGTGAGAACTGAGCACGCATTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
3UTR-3UTR CAA 90 bp TCAGCTGAAGTTTCATTTTATGTTGCCAAGAGCCAGGGATCATTCCAGATTGACGCAGCAGACACAGATTaGCTCACTAGTCTCTCACTC +
Preference number: 3 (lower is better)
Translates to: SAEVSFYVAKSQGSFQIDAADTD*LTSLSL
Trigger: GAGTGAGAGACTAGTGAGCAAATCTGTGTCTGCTGC...GTCAATCTGGAATGATCCCTGGCTCTTGGCAACATAAAATGAAACTTCAGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
3UTR CCA 72 bp TATGTTGCCAAGAGCCAGGGATCATTCCAGATTGACTaGAATAATTGCCCTTCTGAAGGGAGCCCATTTTGT +
Preference number: 3 (lower is better)
Translates to: YVAKSQGSFQID*NNCPSEGSPFC
Trigger: ACAAAATGGGCTCCCTTCAGAAGGGCAATTATTCCAGTCAATCTGGAATGATCCCTGGCTCTTGGCAACATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
3UTR-3UTR CAA 90 bp GTAAATGTGCTTGTTGGTTTTGAGAATTGTGTCATCTTCGATGTTATTGCTTGTCAAACCGGCTCCGTGTaGAAGGCACTGACAGCGTGT +
Preference number: 3 (lower is better)
Translates to: VNVLVGFENCVIFDVIACQTGSV*KALTAC
Trigger: ACACGCTGTCAGTGCCTTCAACACGGAGCCGGTTTG...ACAAGCAATAACATCGAAGATGACACAATTCTCAAAACCAACAAGCACATTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000419769.6
3UTR TCA 72 bp CATAGTAAAGTAAGTAGTGGACAATTCCCAGTTCACTaGATCCCAAACAGCTGGGTGTATGTCTCGTGTTCC +
Preference number: 3 (lower is better)
Translates to: HSKVSSGQFPVH*IPNSWVYVSCS
Trigger: GGAACACGAGACATACACCCAGCTGTTTGGGATTCAGTGAACTGGGAATTGTCCACTACTTACTTTACTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
3UTR GCA 72 bp AAGAGCCAGGGATCATTCCAGATTGACTGGAATAATTaGCCTTCTGAAGGGAGCCCATTTTGTCCAAAAACA +
Preference number: 3 (lower is better)
Translates to: KSQGSFQIDWNN*PSEGSPFCPKT
Trigger: TGTTTTTGGACAAAATGGGCTCCCTTCAGAAGGGCAATTATTCCAGTCAATCTGGAATGATCCCTGGCTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
3UTR GCA 72 bp GAGAGAGAAACAACAGCACTTCGGAAAGCATATTGGTaGAGAGGCAGCAATAAGTATCATGGCTTTGCAAAG +
Preference number: 3 (lower is better)
Translates to: ERETTALRKAYW*RGSNKYHGFAK
Trigger: CTTTGCAAAGCCATGATACTTATTGCTGCCTCTGCACCAATATGCTTTCCGAAGTGCTGTTGTTTCTCTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
3UTR GCA 72 bp TCTTCTATAAGCTCCTTCTGGATAAGCTGGAATGCGTaGTCAGTTCTCACCATTATATCAAGAGCCCCAGAT +
Preference number: 3 (lower is better)
Translates to: SSISSFWISWNA*SVLTIISRAPD
Trigger: ATCTGGGGCTCTTGATATAATGGTGAGAACTGAGCACGCATTCCAGCTTATCCAGAAGGAGCTTATAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
3UTR CCA 72 bp CACAAGTCTACAGCGCTCTTCTGTGTCATGGCAAACTaGAAATGCACAACTGGGTCTGATTTGATGAATAGA +
Preference number: 3 (lower is better)
Translates to: HKSTALFCVMAN*KCTTGSDLMNR
Trigger: TCTATTCATCAAATCAGACCCAGTTGTGCATTTCCAGTTTGCCATGACACAGAAGAGCGCTGTAGACTTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481600.5
3UTR-3UTR CAA 90 bp AAAGGGCGGCATTGGTGGCATCCTCAATTGATTCAAAGTTGTGAATTCCCTTTTGTGCTGCTCTATTATTaGCATTCTGGGCCAGCATTA +
Preference number: 3 (lower is better)
Translates to: KGRHWWHPQLIQSCEFPFVLLYY*HSGPAL
Trigger: TAATGCTGGCCCAGAATGCAAATAATAGAGCAGCAC...AAAAGGGAATTCACAACTTTGAATCAATTGAGGATGCCACCAATGCCGCCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
3UTR-3UTR CAA 90 bp CAAGAGCCCCAGATAGTGTTTTCAACTTTCCAACATTGCTATTCTGACTGGTCAGTGCTGCTCTATTATTaGCATTCTGGGCCAGCATTA +
Preference number: 3 (lower is better)
Translates to: QEPQIVFSTFQHCYSDWSVLLYY*HSGPAL
Trigger: TAATGCTGGCCCAGAATGCAAATAATAGAGCAGCAC...TGACCAGTCAGAATAGCAATGTTGGAAAGTTGAAAACACTATCTGGGGCTCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
3UTR-3UTR CAA 90 bp GCAACTGGACTCTCTGTGAAGGCTATGCAGGATCTCCTGGTCTTCTTTTGTTTGCTGGTCTTCTTTTGTTaGGTAATGAAACTCTTCAAG +
Preference number: 3 (lower is better)
Translates to: ATGLSVKAMQDLLVFFCLLVFFC*VMKLFK
Trigger: CTTGAAGAGTTTCATTACCAAACAAAAGAAGACCAG...CAAACAAAAGAAGACCAGGAGATCCTGCATAGCCTTCACAGAGAGTCCAGTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
3UTR GCA 72 bp TCTACAGCGCTCTTCTGTGTCATGGCAAACTGGAAATaGACAACTGGGTCTGATTTGATGAATAGATTTGTA +
Preference number: 3 (lower is better)
Translates to: STALFCVMANWK*TTGSDLMNRFV
Trigger: TACAAATCTATTCATCAAATCAGACCCAGTTGTGCATTTCCAGTTTGCCATGACACAGAAGAGCGCTGTAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481600.5
3UTR CCA 72 bp TGTATCGTAATGCTCTTCCGTATTTCTGAAGACTCATaGCAGCATCGGACAAAACATAATAGGCCTTTGATG +
Preference number: 3 (lower is better)
Translates to: CIVMLFRISEDS*QHRTKHNRPLM
Trigger: CATCAAAGGCCTATTATGTTTTGTCCGATGCTGCCATGAGTCTTCAGAAATACGGAAGAGCATTACGATACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
3UTR CCA 72 bp TGGCCAAATTCTTCTATAAGCTCCTTCTGGATAAGCTaGAATGCGTGCTCAGTTCTCACCATTATATCAAGA +
Preference number: 3 (lower is better)
Translates to: WPNSSISSFWIS*NACSVLTIISR
Trigger: TCTTGATATAATGGTGAGAACTGAGCACGCATTCCAGCTTATCCAGAAGGAGCTTATAGAAGAATTTGGCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
3UTR-3UTR CAA 90 bp TGTATCGTAATGCTCTTCCGTATTTCTGAAGACTCATGGCAGCATCGGACAAAAAAGTTTCATTTTATGTaGCCAAGAGCCAGGGATCAT +
Preference number: 3 (lower is better)
Translates to: CIVMLFRISEDSWQHRTKKFHFM*PRARDH
Trigger: ATGATCCCTGGCTCTTGGCAACATAAAATGAAACTT...TTTTGTCCGATGCTGCCATGAGTCTTCAGAAATACGGAAGAGCATTACGATACA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
3UTR-3UTR CAA 90 bp TTCTCACCATTATATCAAGAGCCCCAGATAGTGTTTTCAACTTTCCAACATTGCAATAAAAGGGCGGCATaGGTGGCATCCTCAATTGAT +
Preference number: 3 (lower is better)
Translates to: FSPLYQEPQIVFSTFQHCNKRAA*VASSID
Trigger: ATCAATTGAGGATGCCACCAATGCCGCCCTTTTATT...GCAATGTTGGAAAGTTGAAAACACTATCTGGGGCTCTTGATATAATGGTGAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
3UTR-3UTR CAA 90 bp ATTCTTTCCAGAAGAGTCGCGGTTTTATTTGCAGTTGCTCTCAAAAGCTGGGAGTCAATGCCAATGCAGTaGTCATATGATGATGAAATG +
Preference number: 3 (lower is better)
Translates to: ILSRRVAVLFAVALKSWESMPMQ*SYDDEM
Trigger: CATTTCATCATCATATGACAACTGCATTGGCATTGA...CTCCCAGCTTTTGAGAGCAACTGCAAATAAAACCGCGACTCTTCTGGAAAGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525358.1
3UTR TCA 72 bp CTCTCAAAAGCTGGGAGTAAATGTGCTTGTTGGTTTTaGGAATTGTGTCATCTTCGATGTTATTGCTTTGGC +
Preference number: 3 (lower is better)
Translates to: LSKAGSKCACWF*ELCHLRCYCFG
Trigger: GCCAAAGCAATAACATCGAAGATGACACAATTCTCAAAACCAACAAGCACATTTACTCCCAGCTTTTGAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525358.1
3UTR-3UTR CAA 90 bp TTCTCACCATTATATCAAGAGCCCCAGATAGTGTTTTCAACTTTCCAACATTGCAGTTCTCCAACAGACTaGATTATAGCTACTGCTTTG +
Preference number: 3 (lower is better)
Translates to: FSPLYQEPQIVFSTFQHCSSPTD*IIATAL
Trigger: CAAAGCAGTAGCTATAATCAAGTCTGTTGGAGAACT...GCAATGTTGGAAAGTTGAAAACACTATCTGGGGCTCTTGATATAATGGTGAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000481600.5
3UTR TCA 72 bp TTAGACCCGTGTAGCTTGACATACTTCAAAAATACGTaGAAGTGTAACTGCATCACAGCAGGTCTGTTAATA +
Preference number: 3 (lower is better)
Translates to: LDPCSLTYFKNT*KCNCITAGLLI
Trigger: TATTAACAGACCTGCTGTGATGCAGTTACACTTTCACGTATTTTTGAAGTATGTCAAGCTACACGGGTCTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
3UTR GCA 72 bp CATTTACATGAAAACACATCACAAGCTCTGGCACATTaGATATCAAGTTGTCCAACCAATAGTCAATTCCAG +
Preference number: 3 (lower is better)
Translates to: HLHENTSQALAH*ISSCPTNSQFQ
Trigger: CTGGAATTGACTATTGGTTGGACAACTTGATATGCAATGTGCCAGAGCTTGTGATGTGTTTTCATGTAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481600.5
3UTR TCA 72 bp CTCTCAAAAGCTGGGAGTAAATGTGCTTGTTGGTTTTaGGAATTGTGTCATCTTCGATGTTATTGCTTGTTT +
Preference number: 3 (lower is better)
Translates to: LSKAGSKCACWF*ELCHLRCYCLF
Trigger: AAACAAGCAATAACATCGAAGATGACACAATTCTCAAAACCAACAAGCACATTTACTCCCAGCTTTTGAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
3UTR CCA 72 bp TACAATTCCATTTACATGAAAACACATCACAAGCTCTaGCACATTGCATATCAAGTTGTCCAACCAATAGTC +
Preference number: 3 (lower is better)
Translates to: YNSIYMKTHHKL*HIAYQVVQPIV
Trigger: GACTATTGGTTGGACAACTTGATATGCAATGTGCCAGAGCTTGTGATGTGTTTTCATGTAAATGGAATTGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481600.5
CDS-3UTR TCA 90 bp CGGCTCTGTGCAGTCACTGAACGGCATTGCTGCTCGCTGCACTGCCGGCGGCAACCTGGGACAGGAGGCTaGGCCCTCCTCGAGCGGCGG +
Preference number: 4 (lower is better)
Translates to: RLCAVTERHCCSLHCRRQPGTGG*ALLERR
Trigger: CCGCCGCTCGAGGAGGGCTCAGCCTCCTGTCCCAGG...TTGCCGCCGGCAGTGCAGCGAGCAGCAATGCCGTTCAGTGACTGCACAGAGCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp ACTGAACGGCATTGCTGCTCGCTGCACTGCCGGCGGCAAGCTGGCCCAGCAGGTTGCTGCTCGCTGCACTaGCGGCGGCAAGCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: TERHCCSLHCRRQAGPAGCCSLH*RRQAGP
Trigger: TGGGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCA...ACCTGCTGGGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAATGCCGTTCAGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
ENST00000525358.1
CDS-3UTR GCA 90 bp TCACTGAACGGCATTGCTGCTCGCTGCACTGCCGGCGGCAAGCTGGCCCAGCAGGGCATTGCTGCTCGCTaGACTGCCGGCGGCAAGCTG +
Preference number: 4 (lower is better)
Translates to: SLNGIAARCTAGGKLAQQGIAAR*TAGGKL
Trigger: CAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAATGCC...CTGCTGGGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAATGCCGTTCAGTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
ENST00000525358.1
CDS-3UTR CCA 90 bp TCACTGAACGGCATTGCTGCTCGCTGCACTGCCGGCGGCAAGCTGGCCCAGCAGCTGCCGGCGGCAAGCTaGCCCAGCAGGTGGACGATA +
Preference number: 4 (lower is better)
Translates to: SLNGIAARCTAGGKLAQQLPAAS*PSRWTI
Trigger: TATCGTCCACCTGCTGGGCCAGCTTGCCGCCGGCAG...CTGCTGGGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAATGCCGTTCAGTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
ENST00000525358.1
CDS-3UTR GCA 90 bp CACGGCTCTGTGCAGTCACTGAACGGCATTGCTGCTCGCTGCACTGCCGGCGGCACTGAACGGCATTGCTaGTCGCTGCACTGCCGGCGG +
Preference number: 4 (lower is better)
Translates to: HGSVQSLNGIAARCTAGGTERHC*SLHCRR
Trigger: CCGCCGGCAGTGCAGCGAGCAGCAATGCCGTTCAGT...GCCGCCGGCAGTGCAGCGAGCAGCAATGCCGTTCAGTGACTGCACAGAGCCGTG
66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
ENST00000525358.1
CDS-3UTR GCA 90 bp ACTGAACGGCATTGCTGCTCGCTGCACTGCCGGCGGCAAGCTGGCCCAGCAGGTACTGAACGGCATTGCTaGTCGCTGCACTGCCGGCGG +
Preference number: 4 (lower is better)
Translates to: TERHCCSLHCRRQAGPAGTERHC*SLHCRR
Trigger: CCGCCGGCAGTGCAGCGAGCAGCAATGCCGTTCAGT...ACCTGCTGGGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAATGCCGTTCAGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
ENST00000525358.1
CDS-3UTR CCA 90 bp TCACTGAACGGCATTGCTGCTCGCTGCACTGCCGGCGGCAAGCTGGCCCAGCAGCGGCTCCGGCCTCCTTaGCATCCCCCATCACTTCGA +
Preference number: 4 (lower is better)
Translates to: SLNGIAARCTAGGKLAQQRLRPP*HPPSLR
Trigger: TCGAAGTGATGGGGGATGCCAAGGAGGCCGGAGCCG...CTGCTGGGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAATGCCGTTCAGTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CCA 90 bp GTGCAGTCACTGAACGGCATTGCTGCTCGCTGCACTGCCGGCGGCAAGCTGGCCCCTGCTGTTCTGCGGTaGATGAGACAGGCTGAGCGG +
Preference number: 4 (lower is better)
Translates to: VQSLNGIAARCTAGGKLAPAVLR*MRQAER
Trigger: CCGCTCAGCCTGTCTCATCCACCGCAGAACAGCAGG...GGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAATGCCGTTCAGTGACTGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR TCA 90 bp TTGCTGCTCGCTGCACTGCCGGCGGCAAGCTGGCCCAGCAGGTGGACGATAACGGCTCTGTGCAGTCACTaGACGGCATTGCTGCTCGCT +
Preference number: 4 (lower is better)
Translates to: LLLAALPAASWPSRWTITALCSH*TALLLA
Trigger: AGCGAGCAGCAATGCCGTTCAGTGACTGCACAGAGC...CGTTATCGTCCACCTGCTGGGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
ENST00000525358.1
CDS-3UTR TCA 90 bp TCACTGAACGGCATTGCTGCTCGCTGCACTGCCGGCGGCAAGCTGGCCCAGCAGGAAGGGAGCAGGCCATaGAGCCCCTTCCGAATCATT +
Preference number: 4 (lower is better)
Translates to: SLNGIAARCTAGGKLAQQEGSRP*SPFRII
Trigger: AATGATTCGGAAGGGGCTTCATGGCCTGCTCCCTTC...CTGCTGGGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAATGCCGTTCAGTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR TCA 90 bp GGGACACGGCTCTGTGCAGTCACTGAACGGCATTGCTGCTCGCTGCACTGCCGGGCTCTGTGCAGTCACTaGACGGCATTGCTGCTCGCT +
Preference number: 4 (lower is better)
Translates to: GTRLCAVTERHCCSLHCRALCSH*TALLLA
Trigger: AGCGAGCAGCAATGCCGTTCAGTGACTGCACAGAGC...CCGGCAGTGCAGCGAGCAGCAATGCCGTTCAGTGACTGCACAGAGCCGTGTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
ENST00000525358.1
CDS-3UTR GCA 90 bp CGGCATTGCTGCTCGCTGCACTGCCGGCGGCAAGCTGGCCCAGCAGGTGGACGAAGAGAGTCCTTCCTATaGGGTGTACTGCCATGCTCA +
Preference number: 4 (lower is better)
Translates to: RHCCSLHCRRQAGPAGGRRESFL*GVLPCS
Trigger: TGAGCATGGCAGTACACCGCATAGGAAGGACTCTCT...TCGTCCACCTGCTGGGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAATGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CCA 90 bp CGGCTCTGTGCAGTCACTGAACGGCATTGCTGCTCGCTGCACTGCCGGCGGCAAACGGGATTGGAGTGCTaGGGTCAGCTGCTGGAAGGT +
Preference number: 4 (lower is better)
Translates to: RLCAVTERHCCSLHCRRQTGLEC*GQLLEG
Trigger: ACCTTCCAGCAGCTGACCCCAGCACTCCAATCCCGT...TTGCCGCCGGCAGTGCAGCGAGCAGCAATGCCGTTCAGTGACTGCACAGAGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR TCA 90 bp AACAAAGCACCGAATGAACAAACCGGCTCCGTGTTGAAGGCACTGACAGCGTGTCCTGGGACAGGAGGCTaGGCCCTCCTCGAGCGGCGG +
Preference number: 4 (lower is better)
Translates to: NKAPNEQTGSVLKALTACPGTGG*ALLERR
Trigger: CCGCCGCTCGAGGAGGGCTCAGCCTCCTGTCCCAGG...ACACGCTGTCAGTGCCTTCAACACGGAGCCGGTTTGTTCATTCGGTGCTTTGTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
CDS-3UTR TCA 90 bp TTGCTGCTCGCTGCACTGCCGGCGGCAAGCTGGCCCAGCAGGTGGACGATAACGGCATCTTTCAGCAGCTaGAACAGCTTTGCGGCCTTG +
Preference number: 4 (lower is better)
Translates to: LLLAALPAASWPSRWTITASFSS*NSFAAL
Trigger: CAAGGCCGCAAAGCTGTTTCAGCTGCTGAAAGATGC...CGTTATCGTCCACCTGCTGGGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp TTGCTGCTCGCTGCACTGCCGGCGGCAAGCTGGCCCAGCAGGTGGACGATAACGGAACTGGACGATTCCTaGTGTTCTGCGGTGGATGAG +
Preference number: 4 (lower is better)
Translates to: LLLAALPAASWPSRWTITELDDS*CSAVDE
Trigger: CTCATCCACCGCAGAACAGCAGGAATCGTCCAGTTC...CGTTATCGTCCACCTGCTGGGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp TCACTGAACGGCATTGCTGCTCGCTGCACTGCCGGCGGCAAGCTGGCCCAGCAGAGTGCTGGGGTCAGCTaGTGGAAGGTCGCTTTCTTT +
Preference number: 4 (lower is better)
Translates to: SLNGIAARCTAGGKLAQQSAGVS*WKVAFF
Trigger: AAAGAAAGCGACCTTCCAGCAGCTGACCCCAGCACT...CTGCTGGGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAATGCCGTTCAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp CGGCATTGCTGCTCGCTGCACTGCCGGCGGCAAGCTGGCCCAGCAGGTGGACGACTGGATAAGCTGGAATaGGTGCTCAGTTCTCACCAT +
Preference number: 4 (lower is better)
Translates to: RHCCSLHCRRQAGPAGGRLDKLE*VLSSHH
Trigger: ATGGTGAGAACTGAGCACGCATTCCAGCTTATCCAG...TCGTCCACCTGCTGGGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAATGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp AGGCCAGCCTGTGATGGATGGTTGCAGCTCGATACTGACAAAGGGGCTGTCGAGGGCATTGCTGCTCGCTaGACTGCCGGCGGCAAGCTG +
Preference number: 4 (lower is better)
Translates to: RPACDGWLQLDTDKGAVEGIAAR*TAGGKL
Trigger: CAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAATGCC...CTCGACAGCCCCTTTGTCAGTATCGAGCTGCAACCATCCATCACAGGCTGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CCA 90 bp CGGCATTGCTGCTCGCTGCACTGCCGGCGGCAAGCTGGCCCAGCAGGTGGACGATCTCTCGTAACCAGTTaGCAGGTGGGAGTTTCAAGT +
Preference number: 4 (lower is better)
Translates to: RHCCSLHCRRQAGPAGGRSLVTS*QVGVSS
Trigger: ACTTGAAACTCCCACCTGCCAACTGGTTACGAGAGA...TCGTCCACCTGCTGGGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAATGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CCA 90 bp GCAGTCACTGAACGGCATTGCTGCTCGCTGCACTGCCGGCGGCAAGCTGGCCCACCAGCCTGTGATGGATaGTTGCAGCTCGATACTGAC +
Preference number: 4 (lower is better)
Translates to: AVTERHCCSLHCRRQAGPPACDG*LQLDTD
Trigger: GTCAGTATCGAGCTGCAACCATCCATCACAGGCTGG...TGGGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAATGCCGTTCAGTGACTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CCA 90 bp GGGACACGGCTCTGTGCAGTCACTGAACGGCATTGCTGCTCGCTGCACTGCCGGTTCCTCAGACAGCTGTaGTACATGGAGGCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: GTRLCAVTERHCCSLHCRFLRQL*YMEASL
Trigger: CAGGCTGGCCTCCATGTACCACAGCTGTCTGAGGAA...CCGGCAGTGCAGCGAGCAGCAATGCCGTTCAGTGACTGCACAGAGCCGTGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR TCA 90 bp TCACTGAACGGCATTGCTGCTCGCTGCACTGCCGGCGGCAAGCTGGCCCAGCAGGCTCTTCCGTATTTCTaGAGACTCATGGCAGCATCG +
Preference number: 4 (lower is better)
Translates to: SLNGIAARCTAGGKLAQQALPYF*RLMAAS
Trigger: CGATGCTGCCATGAGTCTTCAGAAATACGGAAGAGC...CTGCTGGGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAATGCCGTTCAGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR TCA 90 bp TCACTGAACGGCATTGCTGCTCGCTGCACTGCCGGCGGCAAGCTGGCCCAGCAGATGCCCCACTATGTATaGGGGTTCAAGAGGCTCACT +
Preference number: 4 (lower is better)
Translates to: SLNGIAARCTAGGKLAQQMPHYV*GFKRLT
Trigger: AGTGAGCCTCTTGAACCCTCATACATAGTGGGGCAT...CTGCTGGGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAATGCCGTTCAGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp CACGGCTCTGTGCAGTCACTGAACGGCATTGCTGCTCGCTGCACTGCCGGCGGCAGAGAGTCCTTCCTATaGGGTGTACTGCCATGCTCA +
Preference number: 4 (lower is better)
Translates to: HGSVQSLNGIAARCTAGGRESFL*GVLPCS
Trigger: TGAGCATGGCAGTACACCGCATAGGAAGGACTCTCT...GCCGCCGGCAGTGCAGCGAGCAGCAATGCCGTTCAGTGACTGCACAGAGCCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp GGATGGTTGCAGCTCGATACTGACAAAGGGGCTGTCGAGCAGACACTGAATCCATGCTGCTCGCTGCACTaGCGGCGGCAAGCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: GWLQLDTDKGAVEQTLNPCCSLH*RRQAGP
Trigger: TGGGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCA...TGGATTCAGTGTCTGCTCGACAGCCCCTTTGTCAGTATCGAGCTGCAACCATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CCA 90 bp CGGCATTGCTGCTCGCTGCACTGCCGGCGGCAAGCTGGCCCAGCAGGTGGACGATGTGTCATGGCAAACTaGAAATGCACAACTGGGTCT +
Preference number: 4 (lower is better)
Translates to: RHCCSLHCRRQAGPAGGRCVMAN*KCTTGS
Trigger: AGACCCAGTTGTGCATTTCCAGTTTGCCATGACACA...TCGTCCACCTGCTGGGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAATGCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CCA 90 bp CGGCATTGCTGCTCGCTGCACTGCCGGCGGCAAGCTGGCCCAGCAGGTGGACGAAAAGGGCGGCATTGGTaGCATCCTCAATTGATTCAA +
Preference number: 4 (lower is better)
Translates to: RHCCSLHCRRQAGPAGGRKGRHW*HPQLIQ
Trigger: TTGAATCAATTGAGGATGCCACCAATGCCGCCCTTT...TCGTCCACCTGCTGGGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAATGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR TCA 90 bp TTGCTGCTCGCTGCACTGCCGGCGGCAAGCTGGCCCAGCAGGTGGACGATAACGCTCGGGACCCCCTCTTaGGGATTCATCTTCATATTT +
Preference number: 4 (lower is better)
Translates to: LLLAALPAASWPSRWTITLGTPS*GFIFIF
Trigger: AAATATGAAGATGAATCCTCAAGAGGGGGTCCCGAG...CGTTATCGTCCACCTGCTGGGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR TCA 90 bp GCATTGCTGCTCGCTGCACTGCCGGCGGCAAGCTGGCCCAGCAGGTGGACGATAAAACAAAGCACCGAATaGACAAACCGGCTCCGTGTT +
Preference number: 4 (lower is better)
Translates to: ALLLAALPAASWPSRWTIKQSTE*TNRLRV
Trigger: AACACGGAGCCGGTTTGTTCATTCGGTGCTTTGTTT...TATCGTCCACCTGCTGGGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000525358.1
CDS-3UTR GCA 90 bp TCACTGAACGGCATTGCTGCTCGCTGCACTGCCGGCGGCAAGCTGGCCCAGCAGTGCTCACGTGCGACTTaGTGTAGGGAATTTTCAGGA +
Preference number: 4 (lower is better)
Translates to: SLNGIAARCTAGGKLAQQCSRAT*CREFSG
Trigger: TCCTGAAAATTCCCTACAGCAAGTCGCACGTGAGCA...CTGCTGGGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAATGCCGTTCAGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp GCATTGCTGCTCGCTGCACTGCCGGCGGCAAGCTGGCCCAGCAGGTGGACGATACCTGTGATGGATGGTTaGAGCTCGATACTGACAAAG +
Preference number: 4 (lower is better)
Translates to: ALLLAALPAASWPSRWTIPVMDG*SSILTK
Trigger: CTTTGTCAGTATCGAGCTGCAACCATCCATCACAGG...TATCGTCCACCTGCTGGGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp GTGCAGTCACTGAACGGCATTGCTGCTCGCTGCACTGCCGGCGGCAAGCTGGCCCCTGTGATGGATGGTTaGAGCTCGATACTGACAAAG +
Preference number: 4 (lower is better)
Translates to: VQSLNGIAARCTAGGKLAPVMDG*SSILTK
Trigger: CTTTGTCAGTATCGAGCTGCAACCATCCATCACAGG...GGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAATGCCGTTCAGTGACTGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp TCACTGAACGGCATTGCTGCTCGCTGCACTGCCGGCGGCAAGCTGGCCCAGCAGCAGCTGAAACAGCTTTaGGGCCTTGCTGTAATGAAG +
Preference number: 4 (lower is better)
Translates to: SLNGIAARCTAGGKLAQQQLKQL*GLAVMK
Trigger: CTTCATTACAGCAAGGCCGCAAAGCTGTTTCAGCTG...CTGCTGGGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAATGCCGTTCAGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp GGATGGTTGCAGCTCGATACTGACAAAGGGGCTGTCGAGCAGACACTGAATCCAGGCATTGCTGCTCGCTaGACTGCCGGCGGCAAGCTG +
Preference number: 4 (lower is better)
Translates to: GWLQLDTDKGAVEQTLNPGIAAR*TAGGKL
Trigger: CAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAATGCC...TGGATTCAGTGTCTGCTCGACAGCCCCTTTGTCAGTATCGAGCTGCAACCATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp AGCTGGCCCAGCAGGTGGACGATAACGTTGATTCTTTCCAGAAGAGTCGCGGTTGGCATTGCTGCTCGCTaGACTGCCGGCGGCAAGCTG +
Preference number: 4 (lower is better)
Translates to: SWPSRWTITLILSRRVAVGIAAR*TAGGKL
Trigger: CAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAATGCC...AACCGCGACTCTTCTGGAAAGAATCAACGTTATCGTCCACCTGCTGGGCCAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
ENST00000525358.1
CDS-3UTR GCA 90 bp CCTCAGACAGCTGTGGTACATGGAGGCCAGCCTGTGATGGATGGTTGCAGCTCGGGGGCTGAGGCCACATaGCCCACTATGTATGAGGGT +
Preference number: 4 (lower is better)
Translates to: PQTAVVHGGQPVMDGCSSGAEAT*PTMYEG
Trigger: ACCCTCATACATAGTGGGGCATGTGGCCTCAGCCCC...CGAGCTGCAACCATCCATCACAGGCTGGCCTCCATGTACCACAGCTGTCTGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CCA 90 bp GTGCAGTCACTGAACGGCATTGCTGCTCGCTGCACTGCCGGCGGCAAGCTGGCCTCCTTCTGGATAAGCTaGAATGCGTGCTCAGTTCTC +
Preference number: 4 (lower is better)
Translates to: VQSLNGIAARCTAGGKLASFWIS*NACSVL
Trigger: GAGAACTGAGCACGCATTCCAGCTTATCCAGAAGGA...GGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAATGCCGTTCAGTGACTGCAC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CCA 90 bp AAGCAGTTCGCAGGGAGCATCTTTCAGCAGCTGAAACAGCTTTGCGGCCTTGCTCTGCCGGCGGCAAGCTaGCCCAGCAGGTGGACGATA +
Preference number: 4 (lower is better)
Translates to: KQFAGSIFQQLKQLCGLALPAAS*PSRWTI
Trigger: TATCGTCCACCTGCTGGGCCAGCTTGCCGCCGGCAG...AGCAAGGCCGCAAAGCTGTTTCAGCTGCTGAAAGATGCTCCCTGCGAACTGCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR TCA 90 bp ACTGACAGCGTGTCTGGGACACGGCTCTGTGCAGTCACTGAACGGCATTGCTGCGTTGCAGCTCGATACTaGCAAAGGGGCTGTCGAGCA +
Preference number: 4 (lower is better)
Translates to: TDSVSGTRLCAVTERHCCVAARY*QRGCRA
Trigger: TGCTCGACAGCCCCTTTGTCAGTATCGAGCTGCAAC...GCAGCAATGCCGTTCAGTGACTGCACAGAGCCGTGTCCCAGACACGCTGTCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR TCA 90 bp AGGCCAGCCTGTGATGGATGGTTGCAGCTCGATACTGACAAAGGGGCTGTCGAGATGGAGGCCAGCCTGTaGTGGATGGTTGCAGCTCGA +
Preference number: 4 (lower is better)
Translates to: RPACDGWLQLDTDKGAVEMEASL*WMVAAR
Trigger: TCGAGCTGCAACCATCCATCACAGGCTGGCCTCCAT...CTCGACAGCCCCTTTGTCAGTATCGAGCTGCAACCATCCATCACAGGCTGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR TCA 90 bp ACACGGCTCTGTGCAGTCACTGAACGGCATTGCTGCTCGCTGCACTGCCGGCGGAAACAAAGCACCGAATaGACAAACCGGCTCCGTGTT +
Preference number: 4 (lower is better)
Translates to: TRLCAVTERHCCSLHCRRKQSTE*TNRLRV
Trigger: AACACGGAGCCGGTTTGTTCATTCGGTGCTTTGTTT...CCGCCGGCAGTGCAGCGAGCAGCAATGCCGTTCAGTGACTGCACAGAGCCGTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000525358.1
CDS-3UTR GCA 90 bp CCTCAGACAGCTGTGGTACATGGAGGCCAGCCTGTGATGGATGGTTGCAGCTCGTGCGGTGTACTGCCATaGTCACGTGCGACTTGCTGT +
Preference number: 4 (lower is better)
Translates to: PQTAVVHGGQPVMDGCSSCGVLP*SRATCC
Trigger: ACAGCAAGTCGCACGTGAGCATGGCAGTACACCGCA...CGAGCTGCAACCATCCATCACAGGCTGGCCTCCATGTACCACAGCTGTCTGAGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp ACTGAACGGCATTGCTGCTCGCTGCACTGCCGGCGGCAAGCTGGCCCAGCAGGTCAAGCTCTGGCACATTaGATATCAAGTTGTCCAACC +
Preference number: 4 (lower is better)
Translates to: TERHCCSLHCRRQAGPAGQALAH*ISSCPT
Trigger: GGTTGGACAACTTGATATGCAATGTGCCAGAGCTTG...ACCTGCTGGGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAATGCCGTTCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp ACTGAACGGCATTGCTGCTCGCTGCACTGCCGGCGGCAAGCTGGCCCAGCAGGTATTGACTGGAATAATTaGCCTTCTGAAGGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: TERHCCSLHCRRQAGPAGIDWNN*PSEGSP
Trigger: TGGGCTCCCTTCAGAAGGGCAATTATTCCAGTCAAT...ACCTGCTGGGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAATGCCGTTCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp ATTGCTGCTCGCTGCACTGCCGGCGGCAAGCTGGCCCAGCAGGTGGACGATAACCCTGTGATGGATGGTTaGAGCTCGATACTGACAAAG +
Preference number: 4 (lower is better)
Translates to: IAARCTAGGKLAQQVDDNPVMDG*SSILTK
Trigger: CTTTGTCAGTATCGAGCTGCAACCATCCATCACAGG...GTTATCGTCCACCTGCTGGGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp GCAGCTGAAACAGCTTTGCGGCCTTGCTGTAATGAAGATCTGCCAGCACCCGGTGTCACTGAACGGCATTaGTGCTCGCTGCACTGCCGG +
Preference number: 4 (lower is better)
Translates to: AAETALRPCCNEDLPAPGVTERH*CSLHCR
Trigger: CCGGCAGTGCAGCGAGCAGCAATGCCGTTCAGTGAC...ACCGGGTGCTGGCAGATCTTCATTACAGCAAGGCCGCAAAGCTGTTTCAGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CCA 90 bp GTGCAGTCACTGAACGGCATTGCTGCTCGCTGCACTGCCGGCGGCAAGCTGGCCCAAATATGGGCATGTTaGAGCCGACCAACATATGGA +
Preference number: 4 (lower is better)
Translates to: VQSLNGIAARCTAGGKLAQIWAC*SRPTYG
Trigger: TCCATATGTTGGTCGGCTCCAACATGCCCATATTTG...GGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAATGCCGTTCAGTGACTGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CCA 90 bp GCATTGCTGCTCGCTGCACTGCCGGCGGCAAGCTGGCCCAGCAGGTGGACGATACAAATCCTTGGCAACTaGACTCTCTGTGAAGGCTAT +
Preference number: 4 (lower is better)
Translates to: ALLLAALPAASWPSRWTIQILGN*TLCEGY
Trigger: ATAGCCTTCACAGAGAGTCCAGTTGCCAAGGATTTG...TATCGTCCACCTGCTGGGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
CDS-3UTR CCA 90 bp CCTCAGACAGCTGTGGTACATGGAGGCCAGCCTGTGATGGATGGTTGCAGCTCGGACAGCTGTGGTACATaGAGGCCAGCCTGTGATGGA +
Preference number: 4 (lower is better)
Translates to: PQTAVVHGGQPVMDGCSSDSCGT*RPACDG
Trigger: TCCATCACAGGCTGGCCTCCATGTACCACAGCTGTC...CGAGCTGCAACCATCCATCACAGGCTGGCCTCCATGTACCACAGCTGTCTGAGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CCA 90 bp ACTGCCGGCGGCAAGCTGGCCCAGCAGGTGGACGATAACGTTGATTCTTTCCAGTTCCTCAGACAGCTGTaGTACATGGAGGCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: TAGGKLAQQVDDNVDSFQFLRQL*YMEASL
Trigger: CAGGCTGGCCTCCATGTACCACAGCTGTCTGAGGAA...CTGGAAAGAATCAACGTTATCGTCCACCTGCTGGGCCAGCTTGCCGCCGGCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CCA 90 bp AACAAAGCACCGAATGAACAAACCGGCTCCGTGTTGAAGGCACTGACAGCGTGTCTGCCGGCGGCAAGCTaGCCCAGCAGGTGGACGATA +
Preference number: 4 (lower is better)
Translates to: NKAPNEQTGSVLKALTACLPAAS*PSRWTI
Trigger: TATCGTCCACCTGCTGGGCCAGCTTGCCGCCGGCAG...ACACGCTGTCAGTGCCTTCAACACGGAGCCGGTTTGTTCATTCGGTGCTTTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
ENST00000525358.1
CDS-3UTR CCA 90 bp ATCAGCAGCTGCAGCGGCGTCACCACTCTTAGGCTGGCCAAATTCTTCTATAAGCTGCCGGCGGCAAGCTaGCCCAGCAGGTGGACGATA +
Preference number: 4 (lower is better)
Translates to: ISSCSGVTTLRLAKFFYKLPAAS*PSRWTI
Trigger: TATCGTCCACCTGCTGGGCCAGCTTGCCGCCGGCAG...CTTATAGAAGAATTTGGCCAGCCTAAGAGTGGTGACGCCGCTGCAGCTGCTGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR TCA 90 bp CACGGCTCTGTGCAGTCACTGAACGGCATTGCTGCTCGCTGCACTGCCGGCGGCTGCCATGCCAAAGCTTaGAAATGGCTTGCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: HGSVQSLNGIAARCTAGGCHAKA*KWLAFL
Trigger: AAGAAAAGCAAGCCATTTTCAAGCTTTGGCATGGCA...GCCGCCGGCAGTGCAGCGAGCAGCAATGCCGTTCAGTGACTGCACAGAGCCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR TCA 90 bp GCTGTGGTACATGGAGGCCAGCCTGTGATGGATGGTTGCAGCTCGATACTGACAGTGGATGAGACAGGCTaGGCGGCTCCATCACCATTG +
Preference number: 4 (lower is better)
Translates to: AVVHGGQPVMDGCSSILTVDETG*AAPSPL
Trigger: CAATGGTGATGGAGCCGCTCAGCCTGTCTCATCCAC...TGTCAGTATCGAGCTGCAACCATCCATCACAGGCTGGCCTCCATGTACCACAGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp TCACTGAACGGCATTGCTGCTCGCTGCACTGCCGGCGGCAAGCTGGCCCAGCAGAGTCGCGGTTTTATTTaGAGTTGCTCTCAAAAGCTG +
Preference number: 4 (lower is better)
Translates to: SLNGIAARCTAGGKLAQQSRGFI*SCSQKL
Trigger: CAGCTTTTGAGAGCAACTGCAAATAAAACCGCGACT...CTGCTGGGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAATGCCGTTCAGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
ENST00000525358.1
CDS-3UTR GCA 90 bp TTCATCACTTCTTCTCGATTGAGACTAGGAGAAGCATCAGCAGCTGCAGCGGCGACTGAACGGCATTGCTaGTCGCTGCACTGCCGGCGG +
Preference number: 4 (lower is better)
Translates to: FITSSRLRLGEASAAAAATERHC*SLHCRR
Trigger: CCGCCGGCAGTGCAGCGAGCAGCAATGCCGTTCAGT...CGCCGCTGCAGCTGCTGATGCTTCTCCTAGTCTCAATCGAGAAGAAGTGATGAA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp AGCTGGCCCAGCAGGTGGACGATAACGTTGATTCTTTCCAGAAGAGTCGCGGTTGTCACTGAACGGCATTaGTGCTCGCTGCACTGCCGG +
Preference number: 4 (lower is better)
Translates to: SWPSRWTITLILSRRVAVVTERH*CSLHCR
Trigger: CCGGCAGTGCAGCGAGCAGCAATGCCGTTCAGTGAC...AACCGCGACTCTTCTGGAAAGAATCAACGTTATCGTCCACCTGCTGGGCCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
ENST00000525358.1
CDS-3UTR CCA 90 bp AGCAGCTGCAGCGGCGTCACCACTCTTAGGCTGGCCAAATTCTTCTATAAGCTCCCTGCTGTTCTGCGGTaGATGAGACAGGCTGAGCGG +
Preference number: 4 (lower is better)
Translates to: SSCSGVTTLRLAKFFYKLPAVLR*MRQAER
Trigger: CCGCTCAGCCTGTCTCATCCACCGCAGAACAGCAGG...GAGCTTATAGAAGAATTTGGCCAGCCTAAGAGTGGTGACGCCGCTGCAGCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CCA 90 bp ACTGCCGGCGGCAAGCTGGCCCAGCAGGTGGACGATAACGTTGATTCTTTCCAGTGCCTCCTCCAAATATaGGCATGTTGGAGCCGACCA +
Preference number: 4 (lower is better)
Translates to: TAGGKLAQQVDDNVDSFQCLLQI*ACWSRP
Trigger: TGGTCGGCTCCAACATGCCCATATTTGGAGGAGGCA...CTGGAAAGAATCAACGTTATCGTCCACCTGCTGGGCCAGCTTGCCGCCGGCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CCA 90 bp GCATTGCTGCTCGCTGCACTGCCGGCGGCAAGCTGGCCCAGCAGGTGGACGATACTGATGGATCAGAGCTaGTGCTATAGGATCCATTTT +
Preference number: 4 (lower is better)
Translates to: ALLLAALPAASWPSRWTILMDQS*CYRIHF
Trigger: AAAATGGATCCTATAGCACCAGCTCTGATCCATCAG...TATCGTCCACCTGCTGGGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CCA 90 bp ACACGGCTCTGTGCAGTCACTGAACGGCATTGCTGCTCGCTGCACTGCCGGCGGCTTCGGAAAGCATATTaGTGCAGAGGCAGCAATAAG +
Preference number: 4 (lower is better)
Translates to: TRLCAVTERHCCSLHCRRLRKAY*CRGSNK
Trigger: CTTATTGCTGCCTCTGCACCAATATGCTTTCCGAAG...CCGCCGGCAGTGCAGCGAGCAGCAATGCCGTTCAGTGACTGCACAGAGCCGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CCA 90 bp CGGCTCTGTGCAGTCACTGAACGGCATTGCTGCTCGCTGCACTGCCGGCGGCAATGGGCCAGCATTAGTTaGATATCACCACAAAGTGTC +
Preference number: 4 (lower is better)
Translates to: RLCAVTERHCCSLHCRRQWASIS*ISPQSV
Trigger: GACACTTTGTGGTGATATCCAACTAATGCTGGCCCA...TTGCCGCCGGCAGTGCAGCGAGCAGCAATGCCGTTCAGTGACTGCACAGAGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CCA 90 bp CACGGCTCTGTGCAGTCACTGAACGGCATTGCTGCTCGCTGCACTGCCGGCGGCATAAAAGGGCGGCATTaGTGGCATCCTCAATTGATT +
Preference number: 4 (lower is better)
Translates to: HGSVQSLNGIAARCTAGGIKGRH*WHPQLI
Trigger: AATCAATTGAGGATGCCACCAATGCCGCCCTTTTAT...GCCGCCGGCAGTGCAGCGAGCAGCAATGCCGTTCAGTGACTGCACAGAGCCGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CCA 90 bp AACAAAGCACCGAATGAACAAACCGGCTCCGTGTTGAAGGCACTGACAGCGTGTTCCCCTGCACCACAGTaGGCCTGCGCACAAATCCGC +
Preference number: 4 (lower is better)
Translates to: NKAPNEQTGSVLKALTACSPAPQ*ACAQIR
Trigger: GCGGATTTGTGCGCAGGCCCACTGTGGTGCAGGGGA...ACACGCTGTCAGTGCCTTCAACACGGAGCCGGTTTGTTCATTCGGTGCTTTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
CDS-3UTR CCA 90 bp TGGAGGCCAGCCTGTGATGGATGGTTGCAGCTCGATACTGACAAAGGGGCTGTCGACAGCTGTGGTACATaGAGGCCAGCCTGTGATGGA +
Preference number: 4 (lower is better)
Translates to: WRPACDGWLQLDTDKGAVDSCGT*RPACDG
Trigger: TCCATCACAGGCTGGCCTCCATGTACCACAGCTGTC...GACAGCCCCTTTGTCAGTATCGAGCTGCAACCATCCATCACAGGCTGGCCTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CCA 90 bp ACTGAACGGCATTGCTGCTCGCTGCACTGCCGGCGGCAAGCTGGCCCAGCAGGTTCACCACTCTTAGGCTaGCCAAATTCTTCTATAAGC +
Preference number: 4 (lower is better)
Translates to: TERHCCSLHCRRQAGPAGSPLLG*PNSSIS
Trigger: GCTTATAGAAGAATTTGGCCAGCCTAAGAGTGGTGA...ACCTGCTGGGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAATGCCGTTCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
3UTR CAA 72 bp AGCTGTGGTACATGGAGGCCAGCCTGTGATGGATGGTaGCAGCTCGATACTGACAAAGGGGCTGTCGAGCAG +
Preference number: 4 (lower is better)
Translates to: SCGTWRPACDGW*QLDTDKGAVEQ
Trigger: CTGCTCGACAGCCCCTTTGTCAGTATCGAGCTGCAACCATCCATCACAGGCTGGCCTCCATGTACCACAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR TCA 90 bp CGGCTCTGTGCAGTCACTGAACGGCATTGCTGCTCGCTGCACTGCCGGCGGCAATGCCATGCCAAAGCTTaGAAATGGCTTGCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: RLCAVTERHCCSLHCRRQCHAKA*KWLAFL
Trigger: AAGAAAAGCAAGCCATTTTCAAGCTTTGGCATGGCA...TTGCCGCCGGCAGTGCAGCGAGCAGCAATGCCGTTCAGTGACTGCACAGAGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR TCA 90 bp TCACTGAACGGCATTGCTGCTCGCTGCACTGCCGGCGGCAAGCTGGCCCAGCAGCAACTAACAGAGAGTTaGCTTTCTAAGTCTGTAGAC +
Preference number: 4 (lower is better)
Translates to: SLNGIAARCTAGGKLAQQQLTES*LSKSVD
Trigger: GTCTACAGACTTAGAAAGTCAACTCTCTGTTAGTTG...CTGCTGGGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAATGCCGTTCAGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR TCA 90 bp CAGCTGAAACAGCTTTGCGGCCTTGCTGTAATGAAGATCTGCCAGCACCCGGTGGTTGCAGCTCGATACTaGCAAAGGGGCTGTCGAGCA +
Preference number: 4 (lower is better)
Translates to: QLKQLCGLAVMKICQHPVVAARY*QRGCRA
Trigger: TGCTCGACAGCCCCTTTGTCAGTATCGAGCTGCAAC...CACCGGGTGCTGGCAGATCTTCATTACAGCAAGGCCGCAAAGCTGTTTCAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR TCA 90 bp ACTGAACGGCATTGCTGCTCGCTGCACTGCCGGCGGCAAGCTGGCCCAGCAGGTAGCAGTTTAATGGACTaGAGGAGAAGAAATGACAAC +
Preference number: 4 (lower is better)
Translates to: TERHCCSLHCRRQAGPAGSSLMD*RRRNDN
Trigger: GTTGTCATTTCTTCTCCTTCAGTCCATTAAACTGCT...ACCTGCTGGGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAATGCCGTTCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
ENST00000525358.1
CDS-3UTR TCA 90 bp CACGGCTCTGTGCAGTCACTGAACGGCATTGCTGCTCGCTGCACTGCCGGCGGCTGTGCTTGTTGGTTTTaGGAATTGTGTCATCTTCGA +
Preference number: 4 (lower is better)
Translates to: HGSVQSLNGIAARCTAGGCACWF*ELCHLR
Trigger: TCGAAGATGACACAATTCTCAAAACCAACAAGCACA...GCCGCCGGCAGTGCAGCGAGCAGCAATGCCGTTCAGTGACTGCACAGAGCCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
ENST00000525358.1
CDS-3UTR GCA 90 bp ATTGCTGCTCGCTGCACTGCCGGCGGCAAGCTGGCCCAGCAGGTGGACGATAACGGCTCTTCACTTCATTaGCTCCAAGAAATAAAGCTG +
Preference number: 4 (lower is better)
Translates to: IAARCTAGGKLAQQVDDNGSSLH*LQEIKL
Trigger: CAGCTTTATTTCTTGGAGGCAATGAAGTGAAGAGCC...GTTATCGTCCACCTGCTGGGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp AACAAAGCACCGAATGAACAAACCGGCTCCGTGTTGAAGGCACTGACAGCGTGTGCACCACAGTGGGCCTaGGCACAAATCCGCATGAGC +
Preference number: 4 (lower is better)
Translates to: NKAPNEQTGSVLKALTACAPQWA*AQIRMS
Trigger: GCTCATGCGGATTTGTGCGCAGGCCCACTGTGGTGC...ACACGCTGTCAGTGCCTTCAACACGGAGCCGGTTTGTTCATTCGGTGCTTTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
CDS-3UTR GCA 90 bp ATCAGCAGCTGCAGCGGCGTCACCACTCTTAGGCTGGCCAAATTCTTCTATAAGGCACCACAGTGGGCCTaGGCACAAATCCGCATGAGC +
Preference number: 4 (lower is better)
Translates to: ISSCSGVTTLRLAKFFYKAPQWA*AQIRMS
Trigger: GCTCATGCGGATTTGTGCGCAGGCCCACTGTGGTGC...CTTATAGAAGAATTTGGCCAGCCTAAGAGTGGTGACGCCGCTGCAGCTGCTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp ATTGCTGCTCGCTGCACTGCCGGCGGCAAGCTGGCCCAGCAGGTGGACGATAACAGTCGCGGTTTTATTTaGAGTTGCTCTCAAAAGCTG +
Preference number: 4 (lower is better)
Translates to: IAARCTAGGKLAQQVDDNSRGFI*SCSQKL
Trigger: CAGCTTTTGAGAGCAACTGCAAATAAAACCGCGACT...GTTATCGTCCACCTGCTGGGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
ENST00000525358.1
CDS-3UTR GCA 90 bp AACAAAGCACCGAATGAACAAACCGGCTCCGTGTTGAAGGCACTGACAGCGTGTGTCACTGAACGGCATTaGTGCTCGCTGCACTGCCGG +
Preference number: 4 (lower is better)
Translates to: NKAPNEQTGSVLKALTACVTERH*CSLHCR
Trigger: CCGGCAGTGCAGCGAGCAGCAATGCCGTTCAGTGAC...ACACGCTGTCAGTGCCTTCAACACGGAGCCGGTTTGTTCATTCGGTGCTTTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
ENST00000525358.1
CDS-3UTR GCA 90 bp AAGCAGTTCGCAGGGAGCATCTTTCAGCAGCTGAAACAGCTTTGCGGCCTTGCTGGGGCTGAGGCCACATaGCCCACTATGTATGAGGGT +
Preference number: 4 (lower is better)
Translates to: KQFAGSIFQQLKQLCGLAGAEAT*PTMYEG
Trigger: ACCCTCATACATAGTGGGGCATGTGGCCTCAGCCCC...AGCAAGGCCGCAAAGCTGTTTCAGCTGCTGAAAGATGCTCCCTGCGAACTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CCA 90 bp ACTGAACGGCATTGCTGCTCGCTGCACTGCCGGCGGCAAGCTGGCCCAGCAGGTATTTCTGAAGACTCATaGCAGCATCGGACAAAACAT +
Preference number: 4 (lower is better)
Translates to: TERHCCSLHCRRQAGPAGISEDS*QHRTKH
Trigger: ATGTTTTGTCCGATGCTGCCATGAGTCTTCAGAAAT...ACCTGCTGGGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAATGCCGTTCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CCA 90 bp ACTGCCGGCGGCAAGCTGGCCCAGCAGGTGGACGATAACGTTGATTCTTTCCAGAGCTGGCCCAGCAGGTaGACGATAACGTTGATTCTT +
Preference number: 4 (lower is better)
Translates to: TAGGKLAQQVDDNVDSFQSWPSR*TITLIL
Trigger: AAGAATCAACGTTATCGTCCACCTGCTGGGCCAGCT...CTGGAAAGAATCAACGTTATCGTCCACCTGCTGGGCCAGCTTGCCGCCGGCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
ENST00000525358.1
CDS-3UTR CCA 90 bp ACTGAACGGCATTGCTGCTCGCTGCACTGCCGGCGGCAAGCTGGCCCAGCAGGTTCGATGTTATTGCTTTaGCCTAACAAACTGCTACTG +
Preference number: 4 (lower is better)
Translates to: TERHCCSLHCRRQAGPAGSMLLL*PNKLLL
Trigger: CAGTAGCAGTTTGTTAGGCCAAAGCAATAACATCGA...ACCTGCTGGGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAATGCCGTTCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525358.1
CDS-3UTR TCA 90 bp GCATTGCTGCTCGCTGCACTGCCGGCGGCAAGCTGGCCCAGCAGGTGGACGATACACATCATTTCCCACTaGATCAATAAAGTCATATGC +
Preference number: 4 (lower is better)
Translates to: ALLLAALPAASWPSRWTIHIISH*INKVIC
Trigger: GCATATGACTTTATTGATTCAGTGGGAAATGATGTG...TATCGTCCACCTGCTGGGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR TCA 90 bp TCACTGAACGGCATTGCTGCTCGCTGCACTGCCGGCGGCAAGCTGGCCCAGCAGCACATCATTTCCCACTaGATCAATAAAGTCATATGC +
Preference number: 4 (lower is better)
Translates to: SLNGIAARCTAGGKLAQQHIISH*INKVIC
Trigger: GCATATGACTTTATTGATTCAGTGGGAAATGATGTG...CTGCTGGGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAATGCCGTTCAGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR TCA 90 bp GTGCAGTCACTGAACGGCATTGCTGCTCGCTGCACTGCCGGCGGCAAGCTGGCCCGGCTCCATCACCATTaGTACTGTAATATAAAAACT +
Preference number: 4 (lower is better)
Translates to: VQSLNGIAARCTAGGKLARLHHH*YCNIKT
Trigger: AGTTTTTATATTACAGTATCAATGGTGATGGAGCCG...GGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAATGCCGTTCAGTGACTGCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR TCA 90 bp CCCAAACAGCTGGGTGTATGTCTCGTGTTCCCAATGACCTTAGCGCTTTCAAATCTGTTCTGCGGTGGATaGGACAGGCTGAGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: PKQLGVCLVFPMTLALSNLFCGG*DRLSGS
Trigger: GGAGCCGCTCAGCCTGTCTCATCCACCGCAGAACAG...ATTTGAAAGCGCTAAGGTCATTGGGAACACGAGACATACACCCAGCTGTTTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR TCA 90 bp AACAAAGCACCGAATGAACAAACCGGCTCCGTGTTGAAGGCACTGACAGCGTGTATGGAGGCCAGCCTGTaGTGGATGGTTGCAGCTCGA +
Preference number: 4 (lower is better)
Translates to: NKAPNEQTGSVLKALTACMEASL*WMVAAR
Trigger: TCGAGCTGCAACCATCCATCACAGGCTGGCCTCCAT...ACACGCTGTCAGTGCCTTCAACACGGAGCCGGTTTGTTCATTCGGTGCTTTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
CDS-3UTR TCA 90 bp AAGGCACTGACAGCGTGTCTGGGACACGGCTCTGTGCAGTCACTGAACGGCATTTGTTCATCACCAACCTaGTTCCTCAGACAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: KALTACLGHGSVQSLNGICSSPT*FLRQLW
Trigger: CCACAGCTGTCTGAGGAATCAGGTTGGTGATGAACA...AATGCCGTTCAGTGACTGCACAGAGCCGTGTCCCAGACACGCTGTCAGTGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp CAGCTGAAACAGCTTTGCGGCCTTGCTGTAATGAAGATCTGCCAGCACCCGGTGTTCAAGGCGTGCAAATaGTGTTCGAGGAGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: QLKQLCGLAVMKICQHPVFKACK*CSRRGR
Trigger: TCTGCCCCTCCTCGAACAGCATTTGCACGCCTTGAA...CACCGGGTGCTGGCAGATCTTCATTACAGCAAGGCCGCAAAGCTGTTTCAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp GCCTGTGATGGATGGTTGCAGCTCGATACTGACAAAGGGGCTGTCGAGCAGACAAGTGCTGGGGTCAGCTaGTGGAAGGTCGCTTTCTTT +
Preference number: 4 (lower is better)
Translates to: ACDGWLQLDTDKGAVEQTSAGVS*WKVAFF
Trigger: AAAGAAAGCGACCTTCCAGCAGCTGACCCCAGCACT...TGTCTGCTCGACAGCCCCTTTGTCAGTATCGAGCTGCAACCATCCATCACAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp GCCTGTGATGGATGGTTGCAGCTCGATACTGACAAAGGGGCTGTCGAGCAGACATTAACGGGATTGGAGTaGTGGGGTCAGCTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: ACDGWLQLDTDKGAVEQTLTGLE*WGQLLE
Trigger: TTCCAGCAGCTGACCCCAGCACTCCAATCCCGTTAA...TGTCTGCTCGACAGCCCCTTTGTCAGTATCGAGCTGCAACCATCCATCACAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp AACAAAGCACCGAATGAACAAACCGGCTCCGTGTTGAAGGCACTGACAGCGTGTTTTCAGTTCATCCCCTaGACCACAGTGGGCCTGCGC +
Preference number: 4 (lower is better)
Translates to: NKAPNEQTGSVLKALTACFQFIP*TTVGLR
Trigger: GCGCAGGCCCACTGTGGTGCAGGGGATGAACTGAAA...ACACGCTGTCAGTGCCTTCAACACGGAGCCGGTTTGTTCATTCGGTGCTTTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
CDS-3UTR GCA 90 bp AACAAAGCACCGAATGAACAAACCGGCTCCGTGTTGAAGGCACTGACAGCGTGTGGGGCTGAGGCCACATaGCCCACTATGTATGAGGGT +
Preference number: 4 (lower is better)
Translates to: NKAPNEQTGSVLKALTACGAEAT*PTMYEG
Trigger: ACCCTCATACATAGTGGGGCATGTGGCCTCAGCCCC...ACACGCTGTCAGTGCCTTCAACACGGAGCCGGTTTGTTCATTCGGTGCTTTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
CDS-3UTR GCA 90 bp CCTCAGACAGCTGTGGTACATGGAGGCCAGCCTGTGATGGATGGTTGCAGCTCGAGGGAGGGATATCGCTaGTGCGGATCAGATTATTCT +
Preference number: 4 (lower is better)
Translates to: PQTAVVHGGQPVMDGCSSREGYR*CGSDYS
Trigger: AGAATAATCTGATCCGCAGCAGCGATATCCCTCCCT...CGAGCTGCAACCATCCATCACAGGCTGGCCTCCATGTACCACAGCTGTCTGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419769.6
CDS-3UTR GCA 90 bp TTGCTGCTCGCTGCACTGCCGGCGGCAAGCTGGCCCAGCAGGTGGACGATAACGCATATGATGATGAAATaGCTGCATCACCTTGTTTTC +
Preference number: 4 (lower is better)
Translates to: LLLAALPAASWPSRWTITHMMMK*LHHLVF
Trigger: GAAAACAAGGTGATGCAGGCATTTCATCATCATATG...CGTTATCGTCCACCTGCTGGGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525358.1
CDS-3UTR CCA 90 bp ACTGACAGCGTGTCTGGGACACGGCTCTGTGCAGTCACTGAACGGCATTGCTGCTCTCTCGTAACCAGTTaGCAGGTGGGAGTTTCAAGT +
Preference number: 4 (lower is better)
Translates to: TDSVSGTRLCAVTERHCCSLVTS*QVGVSS
Trigger: ACTTGAAACTCCCACCTGCCAACTGGTTACGAGAGA...GCAGCAATGCCGTTCAGTGACTGCACAGAGCCGTGTCCCAGACACGCTGTCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CCA 90 bp TCACTGAACGGCATTGCTGCTCGCTGCACTGCCGGCGGCAAGCTGGCCCAGCAGTACCGGCATTGTGAATaGATTTTGGTATTTGTCTTC +
Preference number: 4 (lower is better)
Translates to: SLNGIAARCTAGGKLAQQYRHCE*ILVFVF
Trigger: GAAGACAAATACCAAAATCCATTCACAATGCCGGTA...CTGCTGGGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAATGCCGTTCAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CCA 90 bp AACAAAGCACCGAATGAACAAACCGGCTCCGTGTTGAAGGCACTGACAGCGTGTACGGGATTGGAGTGCTaGGGTCAGCTGCTGGAAGGT +
Preference number: 4 (lower is better)
Translates to: NKAPNEQTGSVLKALTACTGLEC*GQLLEG
Trigger: ACCTTCCAGCAGCTGACCCCAGCACTCCAATCCCGT...ACACGCTGTCAGTGCCTTCAACACGGAGCCGGTTTGTTCATTCGGTGCTTTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
CDS-3UTR CCA 90 bp CCCAAACAGCTGGGTGTATGTCTCGTGTTCCCAATGACCTTAGCGCTTTCAAATTCCCCTGCACCACAGTaGGCCTGCGCACAAATCCGC +
Preference number: 4 (lower is better)
Translates to: PKQLGVCLVFPMTLALSNSPAPQ*ACAQIR
Trigger: GCGGATTTGTGCGCAGGCCCACTGTGGTGCAGGGGA...ATTTGAAAGCGCTAAGGTCATTGGGAACACGAGACATACACCCAGCTGTTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CCA 90 bp AAGGCACTGACAGCGTGTCTGGGACACGGCTCTGTGCAGTCACTGAACGGCATTAGCTGGCCCAGCAGGTaGACGATAACGTTGATTCTT +
Preference number: 4 (lower is better)
Translates to: KALTACLGHGSVQSLNGISWPSR*TITLIL
Trigger: AAGAATCAACGTTATCGTCCACCTGCTGGGCCAGCT...AATGCCGTTCAGTGACTGCACAGAGCCGTGTCCCAGACACGCTGTCAGTGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
ENST00000525358.1
CDS-3UTR CCA 90 bp GCAGCTGAAACAGCTTTGCGGCCTTGCTGTAATGAAGATCTGCCAGCACCCGGTTCAGGTTTTGTTCTTTaGGGGCTGAGGCCACATGCC +
Preference number: 4 (lower is better)
Translates to: AAETALRPCCNEDLPAPGSGFVL*GLRPHA
Trigger: GGCATGTGGCCTCAGCCCCCAAAGAACAAAACCTGA...ACCGGGTGCTGGCAGATCTTCATTACAGCAAGGCCGCAAAGCTGTTTCAGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
3UTR CAA 72 bp GTTCGCAGGGAGCATCTTTCAGCAGCTGAAACAGCTTaGCGGCCTTGCTGTAATGAAGATCTGCCAGCACCC +
Preference number: 4 (lower is better)
Translates to: VRREHLSAAETA*RPCCNEDLPAP
Trigger: GGGTGCTGGCAGATCTTCATTACAGCAAGGCCGCAAAGCTGTTTCAGCTGCTGAAAGATGCTCCCTGCGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
3UTR CAA 72 bp CCGGCGGCAAGCTGGCCCAGCAGGTGGACGATAACGTaGATTCTTTCCAGAAGAGTCGCGGTTTTATTTGCA +
Preference number: 4 (lower is better)
Translates to: PAASWPSRWTIT*ILSRRVAVLFA
Trigger: TGCAAATAAAACCGCGACTCTTCTGGAAAGAATCAACGTTATCGTCCACCTGCTGGGCCAGCTTGCCGCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
ENST00000525358.1
CDS-3UTR TCA 90 bp ATAACGTTGATTCTTTCCAGAAGAGTCGCGGTTTTATTTGCAGTTGCTCTCAAACCTGGGACAGGAGGCTaGGCCCTCCTCGAGCGGCGG +
Preference number: 4 (lower is better)
Translates to: ITLILSRRVAVLFAVALKPGTGG*ALLERR
Trigger: CCGCCGCTCGAGGAGGGCTCAGCCTCCTGTCCCAGG...TTTGAGAGCAACTGCAAATAAAACCGCGACTCTTCTGGAAAGAATCAACGTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR TCA 90 bp AGCAGCTGCAGCGGCGTCACCACTCTTAGGCTGGCCAAATTCTTCTATAAGCTCGCATCTTTCAGCAGCTaGAACAGCTTTGCGGCCTTG +
Preference number: 4 (lower is better)
Translates to: SSCSGVTTLRLAKFFYKLASFSS*NSFAAL
Trigger: CAAGGCCGCAAAGCTGTTTCAGCTGCTGAAAGATGC...GAGCTTATAGAAGAATTTGGCCAGCCTAAGAGTGGTGACGCCGCTGCAGCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR TCA 90 bp AGCGGCGTCACCACTCTTAGGCTGGCCAAATTCTTCTATAAGCTCCTTCTGGATGCTCTGTGCAGTCACTaGACGGCATTGCTGCTCGCT +
Preference number: 4 (lower is better)
Translates to: SGVTTLRLAKFFYKLLLDALCSH*TALLLA
Trigger: AGCGAGCAGCAATGCCGTTCAGTGACTGCACAGAGC...ATCCAGAAGGAGCTTATAGAAGAATTTGGCCAGCCTAAGAGTGGTGACGCCGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CCA 90 bp CCCAAACAGCTGGGTGTATGTCTCGTGTTCCCAATGACCTTAGCGCTTTCAAATCCTGCTGTTCTGCGGTaGATGAGACAGGCTGAGCGG +
Preference number: 4 (lower is better)
Translates to: PKQLGVCLVFPMTLALSNPAVLR*MRQAER
Trigger: CCGCTCAGCCTGTCTCATCCACCGCAGAACAGCAGG...ATTTGAAAGCGCTAAGGTCATTGGGAACACGAGACATACACCCAGCTGTTTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CCA 90 bp ACTGCCGGCGGCAAGCTGGCCCAGCAGGTGGACGATAACGTTGATTCTTTCCAGTGTGTCATGGCAAACTaGAAATGCACAACTGGGTCT +
Preference number: 4 (lower is better)
Translates to: TAGGKLAQQVDDNVDSFQCVMAN*KCTTGS
Trigger: AGACCCAGTTGTGCATTTCCAGTTTGCCATGACACA...CTGGAAAGAATCAACGTTATCGTCCACCTGCTGGGCCAGCTTGCCGCCGGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CCA 90 bp ACTGACAGCGTGTCTGGGACACGGCTCTGTGCAGTCACTGAACGGCATTGCTGCCGCTCTTCTGTGTCATaGCAAACTGGAAATGCACAA +
Preference number: 4 (lower is better)
Translates to: TDSVSGTRLCAVTERHCCRSSVS*QTGNAQ
Trigger: TTGTGCATTTCCAGTTTGCCATGACACAGAAGAGCG...GCAGCAATGCCGTTCAGTGACTGCACAGAGCCGTGTCCCAGACACGCTGTCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CCA 90 bp CAAAGGGGCTGTCGAGCAGACACTGAATCCACATCGCAGTATTTTAGGGACTTCACGGGATTGGAGTGCTaGGGTCAGCTGCTGGAAGGT +
Preference number: 4 (lower is better)
Translates to: QRGCRADTESTSQYFRDFTGLEC*GQLLEG
Trigger: ACCTTCCAGCAGCTGACCCCAGCACTCCAATCCCGT...GAAGTCCCTAAAATACTGCGATGTGGATTCAGTGTCTGCTCGACAGCCCCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CCA 90 bp GCCAAGAGCCAGGGATCATTCCAGATTGACTGGAATAATTGCCCTTCTGAAGGGACGGGATTGGAGTGCTaGGGTCAGCTGCTGGAAGGT +
Preference number: 4 (lower is better)
Translates to: AKSQGSFQIDWNNCPSEGTGLEC*GQLLEG
Trigger: ACCTTCCAGCAGCTGACCCCAGCACTCCAATCCCGT...CCCTTCAGAAGGGCAATTATTCCAGTCAATCTGGAATGATCCCTGGCTCTTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
CDS-3UTR CCA 90 bp AACAAAGCACCGAATGAACAAACCGGCTCCGTGTTGAAGGCACTGACAGCGTGTGACAGCTGTGGTACATaGAGGCCAGCCTGTGATGGA +
Preference number: 4 (lower is better)
Translates to: NKAPNEQTGSVLKALTACDSCGT*RPACDG
Trigger: TCCATCACAGGCTGGCCTCCATGTACCACAGCTGTC...ACACGCTGTCAGTGCCTTCAACACGGAGCCGGTTTGTTCATTCGGTGCTTTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
CDS-3UTR CCA 90 bp AACAAAGCACCGAATGAACAAACCGGCTCCGTGTTGAAGGCACTGACAGCGTGTTTCCTCAGACAGCTGTaGTACATGGAGGCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: NKAPNEQTGSVLKALTACFLRQL*YMEASL
Trigger: CAGGCTGGCCTCCATGTACCACAGCTGTCTGAGGAA...ACACGCTGTCAGTGCCTTCAACACGGAGCCGGTTTGTTCATTCGGTGCTTTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
CDS-3UTR CCA 90 bp TTCTTTCCAGAAGAGTCGCGGTTTTATTTGCAGTTGCTCTCAAAAGCTGGGAGTCTGCCGGCGGCAAGCTaGCCCAGCAGGTGGACGATA +
Preference number: 4 (lower is better)
Translates to: FFPEESRFYLQLLSKAGSLPAAS*PSRWTI
Trigger: TATCGTCCACCTGCTGGGCCAGCTTGCCGCCGGCAG...ACTCCCAGCTTTTGAGAGCAACTGCAAATAAAACCGCGACTCTTCTGGAAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
ENST00000525358.1
CDS-3UTR TCA 90 bp CAAGTGAAGAAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCCTGGGACAGGAGGCTaGGCCCTCCTCGAGCGGCGG +
Preference number: 4 (lower is better)
Translates to: QVKKPQNSTVICLSLKITPGTGG*ALLERR
Trigger: CCGCCGCTCGAGGAGGGCTCAGCCTCCTGTCCCAGG...AGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTTCTTCACTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR TCA 90 bp CCATTATATCAAGAGCCCCAGATAGTGTTTTCAACTTTCCAACATTGCTATTCTCCTGGGACAGGAGGCTaGGCCCTCCTCGAGCGGCGG +
Preference number: 4 (lower is better)
Translates to: PLYQEPQIVFSTFQHCYSPGTGG*ALLERR
Trigger: CCGCCGCTCGAGGAGGGCTCAGCCTCCTGTCCCAGG...AGAATAGCAATGTTGGAAAGTTGAAAACACTATCTGGGGCTCTTGATATAATGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR TCA 90 bp CCCAAACAGCTGGGTGTATGTCTCGTGTTCCCAATGACCTTAGCGCTTTCAAATGTGGATGAGACAGGCTaGGCGGCTCCATCACCATTG +
Preference number: 4 (lower is better)
Translates to: PKQLGVCLVFPMTLALSNVDETG*AAPSPL
Trigger: CAATGGTGATGGAGCCGCTCAGCCTGTCTCATCCAC...ATTTGAAAGCGCTAAGGTCATTGGGAACACGAGACATACACCCAGCTGTTTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR TCA 90 bp ACTGACAGCGTGTCTGGGACACGGCTCTGTGCAGTCACTGAACGGCATTGCTGCTGGCTACCGGCATTGTaGATGGATTTTGGTATTTGT +
Preference number: 4 (lower is better)
Translates to: TDSVSGTRLCAVTERHCCWLPAL*MDFGIC
Trigger: ACAAATACCAAAATCCATTCACAATGCCGGTAGCCA...GCAGCAATGCCGTTCAGTGACTGCACAGAGCCGTGTCCCAGACACGCTGTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR TCA 90 bp AACAAAGCACCGAATGAACAAACCGGCTCCGTGTTGAAGGCACTGACAGCGTGTGCATCTTTCAGCAGCTaGAACAGCTTTGCGGCCTTG +
Preference number: 4 (lower is better)
Translates to: NKAPNEQTGSVLKALTACASFSS*NSFAAL
Trigger: CAAGGCCGCAAAGCTGTTTCAGCTGCTGAAAGATGC...ACACGCTGTCAGTGCCTTCAACACGGAGCCGGTTTGTTCATTCGGTGCTTTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
CDS-3UTR GCA 90 bp CCTCAGACAGCTGTGGTACATGGAGGCCAGCCTGTGATGGATGGTTGCAGCTCGGGCTCTTCACTTCATTaGCTCCAAGAAATAAAGCTG +
Preference number: 4 (lower is better)
Translates to: PQTAVVHGGQPVMDGCSSGSSLH*LQEIKL
Trigger: CAGCTTTATTTCTTGGAGGCAATGAAGTGAAGAGCC...CGAGCTGCAACCATCCATCACAGGCTGGCCTCCATGTACCACAGCTGTCTGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp AACAAAGCACCGAATGAACAAACCGGCTCCGTGTTGAAGGCACTGACAGCGTGTTTCAAGGCGTGCAAATaGTGTTCGAGGAGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: NKAPNEQTGSVLKALTACFKACK*CSRRGR
Trigger: TCTGCCCCTCCTCGAACAGCATTTGCACGCCTTGAA...ACACGCTGTCAGTGCCTTCAACACGGAGCCGGTTTGTTCATTCGGTGCTTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
CDS-3UTR GCA 90 bp GCCTGTGATGGATGGTTGCAGCTCGATACTGACAAAGGGGCTGTCGAGCAGACATTTCTCTTCAAGGCGTaGAAATGCTGTTCGAGGAGG +
Preference number: 4 (lower is better)
Translates to: ACDGWLQLDTDKGAVEQTFLFKA*KCCSRR
Trigger: CCTCCTCGAACAGCATTTGCACGCCTTGAAGAGAAA...TGTCTGCTCGACAGCCCCTTTGTCAGTATCGAGCTGCAACCATCCATCACAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp GCAGCTGAAACAGCTTTGCGGCCTTGCTGTAATGAAGATCTGCCAGCACCCGGTTGCTCACGTGCGACTTaGTGTAGGGAATTTTCAGGA +
Preference number: 4 (lower is better)
Translates to: AAETALRPCCNEDLPAPGCSRAT*CREFSG
Trigger: TCCTGAAAATTCCCTACAGCAAGTCGCACGTGAGCA...ACCGGGTGCTGGCAGATCTTCATTACAGCAAGGCCGCAAAGCTGTTTCAGCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp CACCCGGTGTTGTTTCCTAAGGTGTTCATCACCAACCTGATTCCTCAGACAGCTTGCGGTGTACTGCCATaGTCACGTGCGACTTGCTGT +
Preference number: 4 (lower is better)
Translates to: HPVLFPKVFITNLIPQTACGVLP*SRATCC
Trigger: ACAGCAAGTCGCACGTGAGCATGGCAGTACACCGCA...AGCTGTCTGAGGAATCAGGTTGGTGATGAACACCTTAGGAAACAACACCGGGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp AACAAAGCACCGAATGAACAAACCGGCTCCGTGTTGAAGGCACTGACAGCGTGTTCCTATGCGGTGTACTaGCATGCTCACGTGCGACTT +
Preference number: 4 (lower is better)
Translates to: NKAPNEQTGSVLKALTACSYAVY*HAHVRL
Trigger: AAGTCGCACGTGAGCATGGCAGTACACCGCATAGGA...ACACGCTGTCAGTGCCTTCAACACGGAGCCGGTTTGTTCATTCGGTGCTTTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
CDS-3UTR GCA 90 bp AACAAAGCACCGAATGAACAAACCGGCTCCGTGTTGAAGGCACTGACAGCGTGTGAACTGGACGATTCCTaGTGTTCTGCGGTGGATGAG +
Preference number: 4 (lower is better)
Translates to: NKAPNEQTGSVLKALTACELDDS*CSAVDE
Trigger: CTCATCCACCGCAGAACAGCAGGAATCGTCCAGTTC...ACACGCTGTCAGTGCCTTCAACACGGAGCCGGTTTGTTCATTCGGTGCTTTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
CDS-3UTR GCA 90 bp ATCAGCAGCTGCAGCGGCGTCACCACTCTTAGGCTGGCCAAATTCTTCTATAAGTTAACGGGATTGGAGTaGTGGGGTCAGCTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: ISSCSGVTTLRLAKFFYKLTGLE*WGQLLE
Trigger: TTCCAGCAGCTGACCCCAGCACTCCAATCCCGTTAA...CTTATAGAAGAATTTGGCCAGCCTAAGAGTGGTGACGCCGCTGCAGCTGCTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp AGCATCTTTCAGCAGCTGAAACAGCTTTGCGGCCTTGCTGTAATGAAGATCTGCTTTCAGTTCATCCCCTaGACCACAGTGGGCCTGCGC +
Preference number: 4 (lower is better)
Translates to: SIFQQLKQLCGLAVMKICFQFIP*TTVGLR
Trigger: GCGCAGGCCCACTGTGGTGCAGGGGATGAACTGAAA...GCAGATCTTCATTACAGCAAGGCCGCAAAGCTGTTTCAGCTGCTGAAAGATGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp GTGGAAGCTTTAAGTTTGATTCTGATGTTAGCACTTCAAGTGAAGAAGCCACAGTGCTGCTCGCTGCACTaGCGGCGGCAAGCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: VEALSLILMLALQVKKPQCCSLH*RRQAGP
Trigger: TGGGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCA...CTGTGGCTTCTTCACTTGAAGTGCTAACATCAGAATCAAACTTAAAGCTTCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR GCA 90 bp GTACAAGAGAATGGCTACCGGCATTGTGAATGGATTTTGGTATTTGTCTTCAGTTGCTGCTCGCTGCACTaGCGGCGGCAAGCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: VQENGYRHCEWILVFVFSCCSLH*RRQAGP
Trigger: TGGGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCA...ACTGAAGACAAATACCAAAATCCATTCACAATGCCGGTAGCCATTCTCTTGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481600.5
CDS-3UTR CCA 90 bp TGGAGGCCAGCCTGTGATGGATGGTTGCAGCTCGATACTGACAAAGGGGCTGTCCAAATATGGGCATGTTaGAGCCGACCAACATATGGA +
Preference number: 4 (lower is better)
Translates to: WRPACDGWLQLDTDKGAVQIWAC*SRPTYG
Trigger: TCCATATGTTGGTCGGCTCCAACATGCCCATATTTG...GACAGCCCCTTTGTCAGTATCGAGCTGCAACCATCCATCACAGGCTGGCCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CCA 90 bp TGGAGGCCAGCCTGTGATGGATGGTTGCAGCTCGATACTGACAAAGGGGCTGTCCTTCGGAAAGCATATTaGTGCAGAGGCAGCAATAAG +
Preference number: 4 (lower is better)
Translates to: WRPACDGWLQLDTDKGAVLRKAY*CRGSNK
Trigger: CTTATTGCTGCCTCTGCACCAATATGCTTTCCGAAG...GACAGCCCCTTTGTCAGTATCGAGCTGCAACCATCCATCACAGGCTGGCCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CCA 90 bp TGGAGGCCAGCCTGTGATGGATGGTTGCAGCTCGATACTGACAAAGGGGCTGTCAAAGGGCGGCATTGGTaGCATCCTCAATTGATTCAA +
Preference number: 4 (lower is better)
Translates to: WRPACDGWLQLDTDKGAVKGRHW*HPQLIQ
Trigger: TTGAATCAATTGAGGATGCCACCAATGCCGCCCTTT...GACAGCCCCTTTGTCAGTATCGAGCTGCAACCATCCATCACAGGCTGGCCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CCA 90 bp GCGGCGTCACCACTCTTAGGCTGGCCAAATTCTTCTATAAGCTCCTTCTGGATATTCCTCAGACAGCTGTaGTACATGGAGGCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: AASPLLGWPNSSISSFWIFLRQL*YMEASL
Trigger: CAGGCTGGCCTCCATGTACCACAGCTGTCTGAGGAA...TATCCAGAAGGAGCTTATAGAAGAATTTGGCCAGCCTAAGAGTGGTGACGCCGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CCA 90 bp AGGCCAGCCTGTGATGGATGGTTGCAGCTCGATACTGACAAAGGGGCTGTCGAGTCTATAAGCTCCTTCTaGATAAGCTGGAATGCGTGC +
Preference number: 4 (lower is better)
Translates to: RPACDGWLQLDTDKGAVESISSF*ISWNAC
Trigger: GCACGCATTCCAGCTTATCCAGAAGGAGCTTATAGA...CTCGACAGCCCCTTTGTCAGTATCGAGCTGCAACCATCCATCACAGGCTGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CCA 90 bp AACAAAGCACCGAATGAACAAACCGGCTCCGTGTTGAAGGCACTGACAGCGTGTTCAGGTTTTGTTCTTTaGGGGCTGAGGCCACATGCC +
Preference number: 4 (lower is better)
Translates to: NKAPNEQTGSVLKALTACSGFVL*GLRPHA
Trigger: GGCATGTGGCCTCAGCCCCCAAAGAACAAAACCTGA...ACACGCTGTCAGTGCCTTCAACACGGAGCCGGTTTGTTCATTCGGTGCTTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
CDS-3UTR TCA 90 bp AAGGCACTGACAGCGTGTCTGGGACACGGCTCTGTGCAGTCACTGAACGGCATTGAAAGAATTGCCTTTTaGTACCAGTGCTCTTTGCTC +
Preference number: 4 (lower is better)
Translates to: KALTACLGHGSVQSLNGIERIAF*YQCSLL
Trigger: GAGCAAAGAGCACTGGTATCAAAAGGCAATTCTTTC...AATGCCGTTCAGTGACTGCACAGAGCCGTGTCCCAGACACGCTGTCAGTGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR TCA 90 bp GCCCAGCAGGTGGACGATAACGTTGATTCTTTCCAGAAGAGTCGCGGTTTTATTGAAGGGAGCAGGCCATaGAGCCCCTTCCGAATCATT +
Preference number: 4 (lower is better)
Translates to: AQQVDDNVDSFQKSRGFIEGSRP*SPFRII
Trigger: AATGATTCGGAAGGGGCTTCATGGCCTGCTCCCTTC...AATAAAACCGCGACTCTTCTGGAAAGAATCAACGTTATCGTCCACCTGCTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR TCA 90 bp CTCTTAGGCTGGCCAAATTCTTCTATAAGCTCCTTCTGGATAAGCTGGAATGCGATGGAGGCCAGCCTGTaGTGGATGGTTGCAGCTCGA +
Preference number: 4 (lower is better)
Translates to: LLGWPNSSISSFWISWNAMEASL*WMVAAR
Trigger: TCGAGCTGCAACCATCCATCACAGGCTGGCCTCCAT...CGCATTCCAGCTTATCCAGAAGGAGCTTATAGAAGAATTTGGCCAGCCTAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR TCA 90 bp ATCAGCAGCTGCAGCGGCGTCACCACTCTTAGGCTGGCCAAATTCTTCTATAAGTGTTCATCACCAACCTaGTTCCTCAGACAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: ISSCSGVTTLRLAKFFYKCSSPT*FLRQLW
Trigger: CCACAGCTGTCTGAGGAATCAGGTTGGTGATGAACA...CTTATAGAAGAATTTGGCCAGCCTAAGAGTGGTGACGCCGCTGCAGCTGCTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR TCA 90 bp ACTGCCGGCGGCAAGCTGGCCCAGCAGGTGGACGATAACGTTGATTCTTTCCAGTGTGCTTGTTGGTTTTaGGAATTGTGTCATCTTCGA +
Preference number: 4 (lower is better)
Translates to: TAGGKLAQQVDDNVDSFQCACWF*ELCHLR
Trigger: TCGAAGATGACACAATTCTCAAAACCAACAAGCACA...CTGGAAAGAATCAACGTTATCGTCCACCTGCTGGGCCAGCTTGCCGCCGGCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
ENST00000525358.1
CDS-3UTR GCA 90 bp GCCAAGAGCCAGGGATCATTCCAGATTGACTGGAATAATTGCCCTTCTGAAGGGTTCAAGGCGTGCAAATaGTGTTCGAGGAGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: AKSQGSFQIDWNNCPSEGFKACK*CSRRGR
Trigger: TCTGCCCCTCCTCGAACAGCATTTGCACGCCTTGAA...CCCTTCAGAAGGGCAATTATTCCAGTCAATCTGGAATGATCCCTGGCTCTTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
CDS-3UTR GCA 90 bp AGCGGCGTCACCACTCTTAGGCTGGCCAAATTCTTCTATAAGCTCCTTCTGGATTCCTATGCGGTGTACTaGCATGCTCACGTGCGACTT +
Preference number: 4 (lower is better)
Translates to: SGVTTLRLAKFFYKLLLDSYAVY*HAHVRL
Trigger: AAGTCGCACGTGAGCATGGCAGTACACCGCATAGGA...ATCCAGAAGGAGCTTATAGAAGAATTTGGCCAGCCTAAGAGTGGTGACGCCGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp ACTGACAGCGTGTCTGGGACACGGCTCTGTGCAGTCACTGAACGGCATTGCTGCCTCTTCAAGGTGTGCTaGTCTATTATTTGCATTCTG +
Preference number: 4 (lower is better)
Translates to: TDSVSGTRLCAVTERHCCLFKVC*SIICIL
Trigger: CAGAATGCAAATAATAGAGCAGCACACCTTGAAGAG...GCAGCAATGCCGTTCAGTGACTGCACAGAGCCGTGTCCCAGACACGCTGTCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp GCCTGTGATGGATGGTTGCAGCTCGATACTGACAAAGGGGCTGTCGAGCAGACATTTTTCCACAACTGTTaGTCGGCAGCAGACACAGAT +
Preference number: 4 (lower is better)
Translates to: ACDGWLQLDTDKGAVEQTFFHNC*SAADTD
Trigger: ATCTGTGTCTGCTGCCGAGCAACAGTTGTGGAAAAA...TGTCTGCTCGACAGCCCCTTTGTCAGTATCGAGCTGCAACCATCCATCACAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp ATAACGTTGATTCTTTCCAGAAGAGTCGCGGTTTTATTTGCAGTTGCTCTCAAATGCTGCTCGCTGCACTaGCGGCGGCAAGCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: ITLILSRRVAVLFAVALKCCSLH*RRQAGP
Trigger: TGGGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCA...TTTGAGAGCAACTGCAAATAAAACCGCGACTCTTCTGGAAAGAATCAACGTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
ENST00000525358.1
CDS-3UTR GCA 90 bp ACAGCTGTGGTACATGGAGGCCAGCCTGTGATGGATGGTTGCAGCTCGATACTGGAGGGATATCGCTGCTaGGGATCAGATTATTCTACT +
Preference number: 4 (lower is better)
Translates to: TAVVHGGQPVMDGCSSILEGYRC*GSDYST
Trigger: AGTAGAATAATCTGATCCGCAGCAGCGATATCCCTC...CAGTATCGAGCTGCAACCATCCATCACAGGCTGGCCTCCATGTACCACAGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419769.6
CDS-3UTR CCA 90 bp CAAGAGCCCCAGATAGTGTTTTCAACTTTCCAACATTGCTATTCTGACTGGTCACGGCTCCGGCCTCCTTaGCATCCCCCATCACTTCGA +
Preference number: 4 (lower is better)
Translates to: QEPQIVFSTFQHCYSDWSRLRPP*HPPSLR
Trigger: TCGAAGTGATGGGGGATGCCAAGGAGGCCGGAGCCG...TGACCAGTCAGAATAGCAATGTTGGAAAGTTGAAAACACTATCTGGGGCTCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CCA 90 bp ATGTTGCAAGCAACCTTGTACAAGAGAATGGCTACCGGCATTGTGAATGGATTTCGGCTCCGGCCTCCTTaGCATCCCCCATCACTTCGA +
Preference number: 4 (lower is better)
Translates to: MLQATLYKRMATGIVNGFRLRPP*HPPSLR
Trigger: TCGAAGTGATGGGGGATGCCAAGGAGGCCGGAGCCG...AAATCCATTCACAATGCCGGTAGCCATTCTCTTGTACAAGGTTGCTTGCAACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000481600.5
CDS-3UTR CCA 90 bp GCGGCAAGCTGGCCCAGCAGGTGGACGATAACGTTGATTCTTTCCAGAAGAGTCTTGTCTGATCTGAACTaGACGATTCCTGCTGTTCTG +
Preference number: 4 (lower is better)
Translates to: AASWPSRWTITLILSRRVLSDLN*TIPAVL
Trigger: CAGAACAGCAGGAATCGTCCAGTTCAGATCAGACAA...GACTCTTCTGGAAAGAATCAACGTTATCGTCCACCTGCTGGGCCAGCTTGCCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CCA 90 bp AGCAGCTGCAGCGGCGTCACCACTCTTAGGCTGGCCAAATTCTTCTATAAGCTCCCTGACTGGAAGCACTaGGATCTTCAGAAACTGAAG +
Preference number: 4 (lower is better)
Translates to: SSCSGVTTLRLAKFFYKLPDWKH*DLQKLK
Trigger: CTTCAGTTTCTGAAGATCCCAGTGCTTCCAGTCAGG...GAGCTTATAGAAGAATTTGGCCAGCCTAAGAGTGGTGACGCCGCTGCAGCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CCA 90 bp GCCAAGAGCCAGGGATCATTCCAGATTGACTGGAATAATTGCCCTTCTGAAGGGTGCCTCCTCCAAATATaGGCATGTTGGAGCCGACCA +
Preference number: 4 (lower is better)
Translates to: AKSQGSFQIDWNNCPSEGCLLQI*ACWSRP
Trigger: TGGTCGGCTCCAACATGCCCATATTTGGAGGAGGCA...CCCTTCAGAAGGGCAATTATTCCAGTCAATCTGGAATGATCCCTGGCTCTTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
CDS-3UTR CCA 90 bp ACTGACAGCGTGTCTGGGACACGGCTCTGTGCAGTCACTGAACGGCATTGCTGCACACATCACAAGCTCTaGCACATTGCATATCAAGTT +
Preference number: 4 (lower is better)
Translates to: TDSVSGTRLCAVTERHCCTHHKL*HIAYQV
Trigger: AACTTGATATGCAATGTGCCAGAGCTTGTGATGTGT...GCAGCAATGCCGTTCAGTGACTGCACAGAGCCGTGTCCCAGACACGCTGTCAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CCA 90 bp ACAGCTGTGGTACATGGAGGCCAGCCTGTGATGGATGGTTGCAGCTCGATACTGAAAGGGCGGCATTGGTaGCATCCTCAATTGATTCAA +
Preference number: 4 (lower is better)
Translates to: TAVVHGGQPVMDGCSSILKGRHW*HPQLIQ
Trigger: TTGAATCAATTGAGGATGCCACCAATGCCGCCCTTT...CAGTATCGAGCTGCAACCATCCATCACAGGCTGGCCTCCATGTACCACAGCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CCA 90 bp GCGGCAAGCTGGCCCAGCAGGTGGACGATAACGTTGATTCTTTCCAGAAGAGTCTCTATAAGCTCCTTCTaGATAAGCTGGAATGCGTGC +
Preference number: 4 (lower is better)
Translates to: AASWPSRWTITLILSRRVSISSF*ISWNAC
Trigger: GCACGCATTCCAGCTTATCCAGAAGGAGCTTATAGA...GACTCTTCTGGAAAGAATCAACGTTATCGTCCACCTGCTGGGCCAGCTTGCCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR TCA 90 bp GCCTGTGATGGATGGTTGCAGCTCGATACTGACAAAGGGGCTGTCGAGCAGACAGAAAGAATTGCCTTTTaGTACCAGTGCTCTTTGCTC +
Preference number: 4 (lower is better)
Translates to: ACDGWLQLDTDKGAVEQTERIAF*YQCSLL
Trigger: GAGCAAAGAGCACTGGTATCAAAAGGCAATTCTTTC...TGTCTGCTCGACAGCCCCTTTGTCAGTATCGAGCTGCAACCATCCATCACAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR TCA 90 bp AACAAAGCACCGAATGAACAAACCGGCTCCGTGTTGAAGGCACTGACAGCGTGTCTCGGGACCCCCTCTTaGGGATTCATCTTCATATTT +
Preference number: 4 (lower is better)
Translates to: NKAPNEQTGSVLKALTACLGTPS*GFIFIF
Trigger: AAATATGAAGATGAATCCTCAAGAGGGGGTCCCGAG...ACACGCTGTCAGTGCCTTCAACACGGAGCCGGTTTGTTCATTCGGTGCTTTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
CDS-3UTR TCA 90 bp AGCATCTTTCAGCAGCTGAAACAGCTTTGCGGCCTTGCTGTAATGAAGATCTGCCAACTGGACTCTCTGTaGAGGCTATGCAGGATCTCC +
Preference number: 4 (lower is better)
Translates to: SIFQQLKQLCGLAVMKICQLDSL*RLCRIS
Trigger: GGAGATCCTGCATAGCCTTCACAGAGAGTCCAGTTG...GCAGATCTTCATTACAGCAAGGCCGCAAAGCTGTTTCAGCTGCTGAAAGATGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR TCA 90 bp CCCAAACAGCTGGGTGTATGTCTCGTGTTCCCAATGACCTTAGCGCTTTCAAATCAACTGGACTCTCTGTaGAGGCTATGCAGGATCTCC +
Preference number: 4 (lower is better)
Translates to: PKQLGVCLVFPMTLALSNQLDSL*RLCRIS
Trigger: GGAGATCCTGCATAGCCTTCACAGAGAGTCCAGTTG...ATTTGAAAGCGCTAAGGTCATTGGGAACACGAGACATACACCCAGCTGTTTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR TCA 90 bp AGGCCAGCCTGTGATGGATGGTTGCAGCTCGATACTGACAAAGGGGCTGTCGAGCAACTAACAGAGAGTTaGCTTTCTAAGTCTGTAGAC +
Preference number: 4 (lower is better)
Translates to: RPACDGWLQLDTDKGAVEQLTES*LSKSVD
Trigger: GTCTACAGACTTAGAAAGTCAACTCTCTGTTAGTTG...CTCGACAGCCCCTTTGTCAGTATCGAGCTGCAACCATCCATCACAGGCTGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR TCA 90 bp AGCATCTTTCAGCAGCTGAAACAGCTTTGCGGCCTTGCTGTAATGAAGATCTGCGCGCACAAATCCGCATaGGCCTTCCCGTGTTACATA +
Preference number: 4 (lower is better)
Translates to: SIFQQLKQLCGLAVMKICAHKSA*AFPCYI
Trigger: TATGTAACACGGGAAGGCTCATGCGGATTTGTGCGC...GCAGATCTTCATTACAGCAAGGCCGCAAAGCTGTTTCAGCTGCTGAAAGATGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR TCA 90 bp AACAAAGCACCGAATGAACAAACCGGCTCCGTGTTGAAGGCACTGACAGCGTGTCTGTCGAGCAGACACTaGATCCACATCGCAGTATTT +
Preference number: 4 (lower is better)
Translates to: NKAPNEQTGSVLKALTACLSSRH*IHIAVF
Trigger: AAATACTGCGATGTGGATTCAGTGTCTGCTCGACAG...ACACGCTGTCAGTGCCTTCAACACGGAGCCGGTTTGTTCATTCGGTGCTTTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
CDS-3UTR TCA 90 bp CATCATCATGTTGCAAGCAACCTTGTACAAGAGAATGGCTACCGGCATTGTGAAATGGAGGCCAGCCTGTaGTGGATGGTTGCAGCTCGA +
Preference number: 4 (lower is better)
Translates to: HHHVASNLVQENGYRHCEMEASL*WMVAAR
Trigger: TCGAGCTGCAACCATCCATCACAGGCTGGCCTCCAT...TTCACAATGCCGGTAGCCATTCTCTTGTACAAGGTTGCTTGCAACATGATGATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481600.5
CDS-3UTR TCA 90 bp GCAACTGGACTCTCTGTGAAGGCTATGCAGGATCTCCTGGTCTTCTTTTGTTTGGCATCTTTCAGCAGCTaGAACAGCTTTGCGGCCTTG +
Preference number: 4 (lower is better)
Translates to: ATGLSVKAMQDLLVFFCLASFSS*NSFAAL
Trigger: CAAGGCCGCAAAGCTGTTTCAGCTGCTGAAAGATGC...CAAACAAAAGAAGACCAGGAGATCCTGCATAGCCTTCACAGAGAGTCCAGTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
CDS-3UTR TCA 90 bp AAGGCACTGACAGCGTGTCTGGGACACGGCTCTGTGCAGTCACTGAACGGCATTAGCAGTTTAATGGACTaGAGGAGAAGAAATGACAAC +
Preference number: 4 (lower is better)
Translates to: KALTACLGHGSVQSLNGISSLMD*RRRNDN
Trigger: GTTGTCATTTCTTCTCCTTCAGTCCATTAAACTGCT...AATGCCGTTCAGTGACTGCACAGAGCCGTGTCCCAGACACGCTGTCAGTGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
ENST00000525358.1
CDS-3UTR GCA 90 bp AACAAAGCACCGAATGAACAAACCGGCTCCGTGTTGAAGGCACTGACAGCGTGTTGCTCACGTGCGACTTaGTGTAGGGAATTTTCAGGA +
Preference number: 4 (lower is better)
Translates to: NKAPNEQTGSVLKALTACCSRAT*CREFSG
Trigger: TCCTGAAAATTCCCTACAGCAAGTCGCACGTGAGCA...ACACGCTGTCAGTGCCTTCAACACGGAGCCGGTTTGTTCATTCGGTGCTTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
CDS-3UTR GCA 90 bp CTCTTAGGCTGGCCAAATTCTTCTATAAGCTCCTTCTGGATAAGCTGGAATGCGTGCGGTGTACTGCCATaGTCACGTGCGACTTGCTGT +
Preference number: 4 (lower is better)
Translates to: LLGWPNSSISSFWISWNACGVLP*SRATCC
Trigger: ACAGCAAGTCGCACGTGAGCATGGCAGTACACCGCA...CGCATTCCAGCTTATCCAGAAGGAGCTTATAGAAGAATTTGGCCAGCCTAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp TTTTCCACAACTGTTGCTCGGCAGCAGACACAGATTTGCTCACTAGTCTCTCACTCCTATGCGGTGTACTaGCATGCTCACGTGCGACTT +
Preference number: 4 (lower is better)
Translates to: FSTTVARQQTQICSLVSHSYAVY*HAHVRL
Trigger: AAGTCGCACGTGAGCATGGCAGTACACCGCATAGGA...GTGAGAGACTAGTGAGCAAATCTGTGTCTGCTGCCGAGCAACAGTTGTGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp CAAAGGGGCTGTCGAGCAGACACTGAATCCACATCGCAGTATTTTAGGGACTTCAGAGAGTCCTTCCTATaGGGTGTACTGCCATGCTCA +
Preference number: 4 (lower is better)
Translates to: QRGCRADTESTSQYFRDFRESFL*GVLPCS
Trigger: TGAGCATGGCAGTACACCGCATAGGAAGGACTCTCT...GAAGTCCCTAAAATACTGCGATGTGGATTCAGTGTCTGCTCGACAGCCCCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp AGCAGCTGCAGCGGCGTCACCACTCTTAGGCTGGCCAAATTCTTCTATAAGCTCCAAGCTCTGGCACATTaGATATCAAGTTGTCCAACC +
Preference number: 4 (lower is better)
Translates to: SSCSGVTTLRLAKFFYKLQALAH*ISSCPT
Trigger: GGTTGGACAACTTGATATGCAATGTGCCAGAGCTTG...GAGCTTATAGAAGAATTTGGCCAGCCTAAGAGTGGTGACGCCGCTGCAGCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp CCTCAGACAGCTGTGGTACATGGAGGCCAGCCTGTGATGGATGGTTGCAGCTCGAGTTTCATTTTATGTTaGCAAGAGCCAGGGATCATT +
Preference number: 4 (lower is better)
Translates to: PQTAVVHGGQPVMDGCSSSFILC*QEPGII
Trigger: AATGATCCCTGGCTCTTGGCAACATAAAATGAAACT...CGAGCTGCAACCATCCATCACAGGCTGGCCTCCATGTACCACAGCTGTCTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp AACAAAGCACCGAATGAACAAACCGGCTCCGTGTTGAAGGCACTGACAGCGTGTCCTGTGATGGATGGTTaGAGCTCGATACTGACAAAG +
Preference number: 4 (lower is better)
Translates to: NKAPNEQTGSVLKALTACPVMDG*SSILTK
Trigger: CTTTGTCAGTATCGAGCTGCAACCATCCATCACAGG...ACACGCTGTCAGTGCCTTCAACACGGAGCCGGTTTGTTCATTCGGTGCTTTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
CDS-3UTR GCA 90 bp AACAAAGCACCGAATGAACAAACCGGCTCCGTGTTGAAGGCACTGACAGCGTGTCAGCTGAAACAGCTTTaGGGCCTTGCTGTAATGAAG +
Preference number: 4 (lower is better)
Translates to: NKAPNEQTGSVLKALTACQLKQL*GLAVMK
Trigger: CTTCATTACAGCAAGGCCGCAAAGCTGTTTCAGCTG...ACACGCTGTCAGTGCCTTCAACACGGAGCCGGTTTGTTCATTCGGTGCTTTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
CDS-3UTR GCA 90 bp AACAAAGCACCGAATGAACAAACCGGCTCCGTGTTGAAGGCACTGACAGCGTGTCTGGATAAGCTGGAATaGGTGCTCAGTTCTCACCAT +
Preference number: 4 (lower is better)
Translates to: NKAPNEQTGSVLKALTACLDKLE*VLSSHH
Trigger: ATGGTGAGAACTGAGCACGCATTCCAGCTTATCCAG...ACACGCTGTCAGTGCCTTCAACACGGAGCCGGTTTGTTCATTCGGTGCTTTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
CDS-3UTR GCA 90 bp AAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCTGTGTTTCTGCTGCTCGCTGCACTaGCGGCGGCAAGCTGGCCCA +
Preference number: 4 (lower is better)
Translates to: KPQNSTVICLSLKITLCFCCSLH*RRQAGP
Trigger: TGGGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCA...GAAACACAGAGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
CDS-3UTR GCA 90 bp CATCATCATGTTGCAAGCAACCTTGTACAAGAGAATGGCTACCGGCATTGTGAAGGGGCTGAGGCCACATaGCCCACTATGTATGAGGGT +
Preference number: 4 (lower is better)
Translates to: HHHVASNLVQENGYRHCEGAEAT*PTMYEG
Trigger: ACCCTCATACATAGTGGGGCATGTGGCCTCAGCCCC...TTCACAATGCCGGTAGCCATTCTCTTGTACAAGGTTGCTTGCAACATGATGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481600.5
ENST00000530795.1
CDS-3UTR GCA 90 bp GCCTGTGATGGATGGTTGCAGCTCGATACTGACAAAGGGGCTGTCGAGCAGACACAAATCAGTTGCCCATaGAAATCCTTCAGAAGACTC +
Preference number: 4 (lower is better)
Translates to: ACDGWLQLDTDKGAVEQTQISCP*KSFRRL
Trigger: GAGTCTTCTGAAGGATTTGCATGGGCAACTGATTTG...TGTCTGCTCGACAGCCCCTTTGTCAGTATCGAGCTGCAACCATCCATCACAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419769.6
CDS-3UTR CCA 90 bp AACAAAGCACCGAATGAACAAACCGGCTCCGTGTTGAAGGCACTGACAGCGTGTTCCTTCTGGATAAGCTaGAATGCGTGCTCAGTTCTC +
Preference number: 4 (lower is better)
Translates to: NKAPNEQTGSVLKALTACSFWIS*NACSVL
Trigger: GAGAACTGAGCACGCATTCCAGCTTATCCAGAAGGA...ACACGCTGTCAGTGCCTTCAACACGGAGCCGGTTTGTTCATTCGGTGCTTTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
CDS-3UTR CCA 90 bp AGCGGCGTCACCACTCTTAGGCTGGCCAAATTCTTCTATAAGCTCCTTCTGGATAGCTGGCCCAGCAGGTaGACGATAACGTTGATTCTT +
Preference number: 4 (lower is better)
Translates to: SGVTTLRLAKFFYKLLLDSWPSR*TITLIL
Trigger: AAGAATCAACGTTATCGTCCACCTGCTGGGCCAGCT...ATCCAGAAGGAGCTTATAGAAGAATTTGGCCAGCCTAAGAGTGGTGACGCCGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CCA 90 bp TGTGTTAATGGCAGCGTGGTTACACACTGTGCTGAGGTAAGAGGGAGGGATATCGTGTTAATGGCAGCGTaGTTACACACTGTGCTGAGG +
Preference number: 4 (lower is better)
Translates to: CVNGSVVTHCAEVRGRDIVLMAA*LHTVLR
Trigger: CCTCAGCACAGTGTGTAACCACGCTGCCATTAACAC...GATATCCCTCCCTCTTACCTCAGCACAGTGTGTAACCACGCTGCCATTAACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419769.6
3UTR CAA 72 bp GGCCTTGCTGTAATGAAGATCTGCCAGCACCCGGTGTaGTTTCCTAAGGTGTTCATCACCAACCTGATTCCT +
Preference number: 4 (lower is better)
Translates to: GLAVMKICQHPV*FPKVFITNLIP
Trigger: AGGAATCAGGTTGGTGATGAACACCTTAGGAAACAACACCGGGTGCTGGCAGATCTTCATTACAGCAAGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR TCA 90 bp TATGTTGCCAAGAGCCAGGGATCATTCCAGATTGACTGGAATAATTGCCCTTCTGAAGGGAGCAGGCCATaGAGCCCCTTCCGAATCATT +
Preference number: 4 (lower is better)
Translates to: YVAKSQGSFQIDWNNCPSEGSRP*SPFRII
Trigger: AATGATTCGGAAGGGGCTTCATGGCCTGCTCCCTTC...AGAAGGGCAATTATTCCAGTCAATCTGGAATGATCCCTGGCTCTTGGCAACATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
CDS-3UTR TCA 90 bp AGCTGGCCCAGCAGGTGGACGATAACGTTGATTCTTTCCAGAAGAGTCGCGGTTTGGCTACCGGCATTGTaGATGGATTTTGGTATTTGT +
Preference number: 4 (lower is better)
Translates to: SWPSRWTITLILSRRVAVWLPAL*MDFGIC
Trigger: ACAAATACCAAAATCCATTCACAATGCCGGTAGCCA...AACCGCGACTCTTCTGGAAAGAATCAACGTTATCGTCCACCTGCTGGGCCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR TCA 90 bp AATCCCAAACAGCTGGGTGTATGTCTCGTGTTCCCAATGACCTTAGCGCTTTCAGCTCTTCCGTATTTCTaGAGACTCATGGCAGCATCG +
Preference number: 4 (lower is better)
Translates to: NPKQLGVCLVFPMTLALSALPYF*RLMAAS
Trigger: CGATGCTGCCATGAGTCTTCAGAAATACGGAAGAGC...TGAAAGCGCTAAGGTCATTGGGAACACGAGACATACACCCAGCTGTTTGGGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR TCA 90 bp GACACTGAATCCACATCGCAGTATTTTAGGGACTTCATCATGGCCTCACTGACTGCGCACAAATCCGCATaGGCCTTCCCGTGTTACATA +
Preference number: 4 (lower is better)
Translates to: DTESTSQYFRDFIMASLTAHKSA*AFPCYI
Trigger: TATGTAACACGGGAAGGCTCATGCGGATTTGTGCGC...AGTCAGTGAGGCCATGATGAAGTCCCTAAAATACTGCGATGTGGATTCAGTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR TCA 90 bp AGCGGCGTCACCACTCTTAGGCTGGCCAAATTCTTCTATAAGCTCCTTCTGGATCTGTCGAGCAGACACTaGATCCACATCGCAGTATTT +
Preference number: 4 (lower is better)
Translates to: SGVTTLRLAKFFYKLLLDLSSRH*IHIAVF
Trigger: AAATACTGCGATGTGGATTCAGTGTCTGCTCGACAG...ATCCAGAAGGAGCTTATAGAAGAATTTGGCCAGCCTAAGAGTGGTGACGCCGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR TCA 90 bp AGGCCAGCCTGTGATGGATGGTTGCAGCTCGATACTGACAAAGGGGCTGTCGAGGAGACTCAAATATACTaGGGAGTTTCATCACTTCTT +
Preference number: 4 (lower is better)
Translates to: RPACDGWLQLDTDKGAVEETQIY*GVSSLL
Trigger: AAGAAGTGATGAAACTCCTCAGTATATTTGAGTCTC...CTCGACAGCCCCTTTGTCAGTATCGAGCTGCAACCATCCATCACAGGCTGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR TCA 90 bp GCCTGTGATGGATGGTTGCAGCTCGATACTGACAAAGGGGCTGTCGAGCAGACAAGCAGTTTAATGGACTaGAGGAGAAGAAATGACAAC +
Preference number: 4 (lower is better)
Translates to: ACDGWLQLDTDKGAVEQTSSLMD*RRRNDN
Trigger: GTTGTCATTTCTTCTCCTTCAGTCCATTAAACTGCT...TGTCTGCTCGACAGCCCCTTTGTCAGTATCGAGCTGCAACCATCCATCACAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR TCA 90 bp CCGTGTTACATAATAAAAGGGCGGCATTGGTGGCATCCTCAATTGATTCAAAGTGCTCTGTGCAGTCACTaGACGGCATTGCTGCTCGCT +
Preference number: 4 (lower is better)
Translates to: PCYIIKGRHWWHPQLIQSALCSH*TALLLA
Trigger: AGCGAGCAGCAATGCCGTTCAGTGACTGCACAGAGC...ACTTTGAATCAATTGAGGATGCCACCAATGCCGCCCTTTTATTATGTAACACGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp AACAAAGCACCGAATGAACAAACCGGCTCCGTGTTGAAGGCACTGACAGCGTGTCAAGCTCTGGCACATTaGATATCAAGTTGTCCAACC +
Preference number: 4 (lower is better)
Translates to: NKAPNEQTGSVLKALTACQALAH*ISSCPT
Trigger: GGTTGGACAACTTGATATGCAATGTGCCAGAGCTTG...ACACGCTGTCAGTGCCTTCAACACGGAGCCGGTTTGTTCATTCGGTGCTTTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
CDS-3UTR GCA 90 bp AACAAAGCACCGAATGAACAAACCGGCTCCGTGTTGAAGGCACTGACAGCGTGTCAAATCAGTTGCCCATaGAAATCCTTGGCAACTGGA +
Preference number: 4 (lower is better)
Translates to: NKAPNEQTGSVLKALTACQISCP*KSLATG
Trigger: TCCAGTTGCCAAGGATTTGCATGGGCAACTGATTTG...ACACGCTGTCAGTGCCTTCAACACGGAGCCGGTTTGTTCATTCGGTGCTTTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
CDS-3UTR GCA 90 bp TGTGTTAATGGCAGCGTGGTTACACACTGTGCTGAGGTAAGAGGGAGGGATATCCAGCTGAAACAGCTTTaGGGCCTTGCTGTAATGAAG +
Preference number: 4 (lower is better)
Translates to: CVNGSVVTHCAEVRGRDIQLKQL*GLAVMK
Trigger: CTTCATTACAGCAAGGCCGCAAAGCTGTTTCAGCTG...GATATCCCTCCCTCTTACCTCAGCACAGTGTGTAACCACGCTGCCATTAACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419769.6
CDS-3UTR GCA 90 bp CAGCTGAAACAGCTTTGCGGCCTTGCTGTAATGAAGATCTGCCAGCACCCGGTGATAAGCTGGAATGCGTaGTCAGTTCTCACCATTATA +
Preference number: 4 (lower is better)
Translates to: QLKQLCGLAVMKICQHPVISWNA*SVLTII
Trigger: TATAATGGTGAGAACTGAGCACGCATTCCAGCTTAT...CACCGGGTGCTGGCAGATCTTCATTACAGCAAGGCCGCAAAGCTGTTTCAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp CAAGTGAAGAAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTGGCATTGCTGCTCGCTaGACTGCCGGCGGCAAGCTG +
Preference number: 4 (lower is better)
Translates to: QVKKPQNSTVICLSLKITGIAAR*TAGGKL
Trigger: CAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAATGCC...AGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTTCTTCACTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR GCA 90 bp TCAGTTCTCACCATTATATCAAGAGCCCCAGATAGTGTTTTCAACTTTCCAACAACTGAACGGCATTGCTaGTCGCTGCACTGCCGGCGG +
Preference number: 4 (lower is better)
Translates to: SVLTIISRAPDSVFNFPTTERHC*SLHCRR
Trigger: CCGCCGGCAGTGCAGCGAGCAGCAATGCCGTTCAGT...TGTTGGAAAGTTGAAAACACTATCTGGGGCTCTTGATATAATGGTGAGAACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp CAAGAGCCCCAGATAGTGTTTTCAACTTTCCAACATTGCTATTCTGACTGGTCAGGGGCTGAGGCCACATaGCCCACTATGTATGAGGGT +
Preference number: 4 (lower is better)
Translates to: QEPQIVFSTFQHCYSDWSGAEAT*PTMYEG
Trigger: ACCCTCATACATAGTGGGGCATGTGGCCTCAGCCCC...TGACCAGTCAGAATAGCAATGTTGGAAAGTTGAAAACACTATCTGGGGCTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp ATTCTTTCCAGAAGAGTCGCGGTTTTATTTGCAGTTGCTCTCAAAAGCTGGGAGCGCACTTCCGGTCTCTaGCAGGAAGAAGTAGCTGTG +
Preference number: 4 (lower is better)
Translates to: ILSRRVAVLFAVALKSWERTSGL*QEEVAV
Trigger: CACAGCTACTTCTTCCTGGCAGAGACCGGAAGTGCG...CTCCCAGCTTTTGAGAGCAACTGCAAATAAAACCGCGACTCTTCTGGAAAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CCA 90 bp GTGGAAGCTTTAAGTTTGATTCTGATGTTAGCACTTCAAGTGAAGAAGCCACAGTCCTCGGATTCTCCCTaGGACAGGAGGCTGAGCCCT +
Preference number: 4 (lower is better)
Translates to: VEALSLILMLALQVKKPQSSDSP*DRRLSP
Trigger: AGGGCTCAGCCTCCTGTCCCAGGGAGAATCCGAGGA...CTGTGGCTTCTTCACTTGAAGTGCTAACATCAGAATCAAACTTAAAGCTTCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR CCA 90 bp CTCTTAGGCTGGCCAAATTCTTCTATAAGCTCCTTCTGGATAAGCTGGAATGCGCTGCTGGCCCTAGTTTaGCACTCTCTCGTAACCAGT +
Preference number: 4 (lower is better)
Translates to: LLGWPNSSISSFWISWNALLALV*HSLVTS
Trigger: ACTGGTTACGAGAGAGTGCCAAACTAGGGCCAGCAG...CGCATTCCAGCTTATCCAGAAGGAGCTTATAGAAGAATTTGGCCAGCCTAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CCA 90 bp CAGCTGAAACAGCTTTGCGGCCTTGCTGTAATGAAGATCTGCCAGCACCCGGTGGAGCCGACCAACATATaGATATCTTCAAATGTCCAT +
Preference number: 4 (lower is better)
Translates to: QLKQLCGLAVMKICQHPVEPTNI*ISSNVH
Trigger: ATGGACATTTGAAGATATCCATATGTTGGTCGGCTC...CACCGGGTGCTGGCAGATCTTCATTACAGCAAGGCCGCAAAGCTGTTTCAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CCA 90 bp AACAAAGCACCGAATGAACAAACCGGCTCCGTGTTGAAGGCACTGACAGCGTGTCAAATATGGGCATGTTaGAGCCGACCAACATATGGA +
Preference number: 4 (lower is better)
Translates to: NKAPNEQTGSVLKALTACQIWAC*SRPTYG
Trigger: TCCATATGTTGGTCGGCTCCAACATGCCCATATTTG...ACACGCTGTCAGTGCCTTCAACACGGAGCCGGTTTGTTCATTCGGTGCTTTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
CDS-3UTR CCA 90 bp AACAAAGCACCGAATGAACAAACCGGCTCCGTGTTGAAGGCACTGACAGCGTGTTGTGTCATGGCAAACTaGAAATGCACAACTGGGTCT +
Preference number: 4 (lower is better)
Translates to: NKAPNEQTGSVLKALTACCVMAN*KCTTGS
Trigger: AGACCCAGTTGTGCATTTCCAGTTTGCCATGACACA...ACACGCTGTCAGTGCCTTCAACACGGAGCCGGTTTGTTCATTCGGTGCTTTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000419769.6
CDS-3UTR CCA 90 bp AACAAAGCACCGAATGAACAAACCGGCTCCGTGTTGAAGGCACTGACAGCGTGTCGCTCTTCTGTGTCATaGCAAACTGGAAATGCACAA +
Preference number: 4 (lower is better)
Translates to: NKAPNEQTGSVLKALTACRSSVS*QTGNAQ
Trigger: TTGTGCATTTCCAGTTTGCCATGACACAGAAGAGCG...ACACGCTGTCAGTGCCTTCAACACGGAGCCGGTTTGTTCATTCGGTGCTTTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
CDS-3UTR CCA 90 bp AACAAAGCACCGAATGAACAAACCGGCTCCGTGTTGAAGGCACTGACAGCGTGTCTTCGGAAAGCATATTaGTGCAGAGGCAGCAATAAG +
Preference number: 4 (lower is better)
Translates to: NKAPNEQTGSVLKALTACLRKAY*CRGSNK
Trigger: CTTATTGCTGCCTCTGCACCAATATGCTTTCCGAAG...ACACGCTGTCAGTGCCTTCAACACGGAGCCGGTTTGTTCATTCGGTGCTTTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
CDS-3UTR CCA 90 bp AAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCTGTGTTTCCTGCCGGCGGCAAGCTaGCCCAGCAGGTGGACGATA +
Preference number: 4 (lower is better)
Translates to: KPQNSTVICLSLKITLCFLPAAS*PSRWTI
Trigger: TATCGTCCACCTGCTGGGCCAGCTTGCCGCCGGCAG...GAAACACAGAGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
CDS-3UTR CCA 90 bp ACTGGACTCTCTGTGAAGGCTATGCAGGATCTCCTGGTCTTCTTTTGTTTGGTATCAGGTTTTGTTCTTTaGGGGCTGAGGCCACATGCC +
Preference number: 4 (lower is better)
Translates to: TGLSVKAMQDLLVFFCLVSGFVL*GLRPHA
Trigger: GGCATGTGGCCTCAGCCCCCAAAGAACAAAACCTGA...TACCAAACAAAAGAAGACCAGGAGATCCTGCATAGCCTTCACAGAGAGTCCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
CDS-3UTR TCA 90 bp AACAAAGCACCGAATGAACAAACCGGCTCCGTGTTGAAGGCACTGACAGCGTGTTGCCATGCCAAAGCTTaGAAATGGCTTGCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: NKAPNEQTGSVLKALTACCHAKA*KWLAFL
Trigger: AAGAAAAGCAAGCCATTTTCAAGCTTTGGCATGGCA...ACACGCTGTCAGTGCCTTCAACACGGAGCCGGTTTGTTCATTCGGTGCTTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
CDS-3UTR TCA 90 bp AAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCTGTGTTTCCTGTTCTGCGGTGGATaGGACAGGCTGAGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: KPQNSTVICLSLKITLCFLFCGG*DRLSGS
Trigger: GGAGCCGCTCAGCCTGTCTCATCCACCGCAGAACAG...GAAACACAGAGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
CDS-3UTR TCA 90 bp ACCATTATATCAAGAGCCCCAGATAGTGTTTTCAACTTTCCAACATTGCTATTCCTGTTCTGCGGTGGATaGGACAGGCTGAGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: TIISRAPDSVFNFPTLLFLFCGG*DRLSGS
Trigger: GGAGCCGCTCAGCCTGTCTCATCCACCGCAGAACAG...GAATAGCAATGTTGGAAAGTTGAAAACACTATCTGGGGCTCTTGATATAATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR TCA 90 bp CCATTATATCAAGAGCCCCAGATAGTGTTTTCAACTTTCCAACATTGCTATTCTCTGTTCTGCGGTGGATaGGACAGGCTGAGCGGCTCC +
Preference number: 4 (lower is better)
Translates to: PLYQEPQIVFSTFQHCYSLFCGG*DRLSGS
Trigger: GGAGCCGCTCAGCCTGTCTCATCCACCGCAGAACAG...AGAATAGCAATGTTGGAAAGTTGAAAACACTATCTGGGGCTCTTGATATAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR TCA 90 bp GCGGCGTCACCACTCTTAGGCTGGCCAAATTCTTCTATAAGCTCCTTCTGGATATCCGAATCATTTGTCTaGTCTGAACTGGACGATTCC +
Preference number: 4 (lower is better)
Translates to: AASPLLGWPNSSISSFWISESFV*SELDDS
Trigger: GGAATCGTCCAGTTCAGATCAGACAAATGATTCGGA...TATCCAGAAGGAGCTTATAGAAGAATTTGGCCAGCCTAAGAGTGGTGACGCCGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR TCA 90 bp AACAAAGCACCGAATGAACAAACCGGCTCCGTGTTGAAGGCACTGACAGCGTGTTGGCTACCGGCATTGTaGATGGATTTTGGTATTTGT +
Preference number: 4 (lower is better)
Translates to: NKAPNEQTGSVLKALTACWLPAL*MDFGIC
Trigger: ACAAATACCAAAATCCATTCACAATGCCGGTAGCCA...ACACGCTGTCAGTGCCTTCAACACGGAGCCGGTTTGTTCATTCGGTGCTTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
CDS-3UTR TCA 90 bp GACACTGAATCCACATCGCAGTATTTTAGGGACTTCATCATGGCCTCACTGACTCAATTCCCAGTTCACTaGATCCCAAACAGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: DTESTSQYFRDFIMASLTQFPVH*IPNSWV
Trigger: CACCCAGCTGTTTGGGATTCAGTGAACTGGGAATTG...AGTCAGTGAGGCCATGATGAAGTCCCTAAAATACTGCGATGTGGATTCAGTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR TCA 90 bp AGCATCTTTCAGCAGCTGAAACAGCTTTGCGGCCTTGCTGTAATGAAGATCTGCCTGTCGAGCAGACACTaGATCCACATCGCAGTATTT +
Preference number: 4 (lower is better)
Translates to: SIFQQLKQLCGLAVMKICLSSRH*IHIAVF
Trigger: AAATACTGCGATGTGGATTCAGTGTCTGCTCGACAG...GCAGATCTTCATTACAGCAAGGCCGCAAAGCTGTTTCAGCTGCTGAAAGATGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR TCA 90 bp GTGGAAGCTTTAAGTTTGATTCTGATGTTAGCACTTCAAGTGAAGAAGCCACAGATGGAGGCCAGCCTGTaGTGGATGGTTGCAGCTCGA +
Preference number: 4 (lower is better)
Translates to: VEALSLILMLALQVKKPQMEASL*WMVAAR
Trigger: TCGAGCTGCAACCATCCATCACAGGCTGGCCTCCAT...CTGTGGCTTCTTCACTTGAAGTGCTAACATCAGAATCAAACTTAAAGCTTCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR TCA 90 bp GACACTGAATCCACATCGCAGTATTTTAGGGACTTCATCATGGCCTCACTGACTTGTTCATCACCAACCTaGTTCCTCAGACAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: DTESTSQYFRDFIMASLTCSSPT*FLRQLW
Trigger: CCACAGCTGTCTGAGGAATCAGGTTGGTGATGAACA...AGTCAGTGAGGCCATGATGAAGTCCCTAAAATACTGCGATGTGGATTCAGTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR TCA 90 bp GTGGAAGCTTTAAGTTTGATTCTGATGTTAGCACTTCAAGTGAAGAAGCCACAGGCTCTGTGCAGTCACTaGACGGCATTGCTGCTCGCT +
Preference number: 4 (lower is better)
Translates to: VEALSLILMLALQVKKPQALCSH*TALLLA
Trigger: AGCGAGCAGCAATGCCGTTCAGTGACTGCACAGAGC...CTGTGGCTTCTTCACTTGAAGTGCTAACATCAGAATCAAACTTAAAGCTTCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR GCA 90 bp GCCCAGCAGGTGGACGATAACGTTGATTCTTTCCAGAAGAGTCGCGGTTTTATTTTTCTCTTCAAGGCGTaGAAATGCTGTTCGAGGAGG +
Preference number: 4 (lower is better)
Translates to: AQQVDDNVDSFQKSRGFIFLFKA*KCCSRR
Trigger: CCTCCTCGAACAGCATTTGCACGCCTTGAAGAGAAA...AATAAAACCGCGACTCTTCTGGAAAGAATCAACGTTATCGTCCACCTGCTGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp GCGGCAAGCTGGCCCAGCAGGTGGACGATAACGTTGATTCTTTCCAGAAGAGTCTCTTCATCATCATGTTaGAAGCAACCTTGTACAAGA +
Preference number: 4 (lower is better)
Translates to: AASWPSRWTITLILSRRVSSSSC*KQPCTR
Trigger: TCTTGTACAAGGTTGCTTGCAACATGATGATGAAGA...GACTCTTCTGGAAAGAATCAACGTTATCGTCCACCTGCTGGGCCAGCTTGCCGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp CATCATCATGTTGCAAGCAACCTTGTACAAGAGAATGGCTACCGGCATTGTGAATTAACGGGATTGGAGTaGTGGGGTCAGCTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: HHHVASNLVQENGYRHCELTGLE*WGQLLE
Trigger: TTCCAGCAGCTGACCCCAGCACTCCAATCCCGTTAA...TTCACAATGCCGGTAGCCATTCTCTTGTACAAGGTTGCTTGCAACATGATGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481600.5
CDS-3UTR GCA 90 bp ATCAGCAGCTGCAGCGGCGTCACCACTCTTAGGCTGGCCAAATTCTTCTATAAGCGGAAAGCATATTGGTaGAGAGGCAGCAATAAGTAT +
Preference number: 4 (lower is better)
Translates to: ISSCSGVTTLRLAKFFYKRKAYW*RGSNKY
Trigger: ATACTTATTGCTGCCTCTGCACCAATATGCTTTCCG...CTTATAGAAGAATTTGGCCAGCCTAAGAGTGGTGACGCCGCTGCAGCTGCTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp GCTGTGGTACATGGAGGCCAGCCTGTGATGGATGGTTGCAGCTCGATACTGACATTCAAGTCACTAAACTaGAAGATTTCATTAGCAGCC +
Preference number: 4 (lower is better)
Translates to: AVVHGGQPVMDGCSSILTFKSLN*KISLAA
Trigger: GGCTGCTAATGAAATCTTGCAGTTTAGTGACTTGAA...TGTCAGTATCGAGCTGCAACCATCCATCACAGGCTGGCCTCCATGTACCACAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp GTACAAGAGAATGGCTACCGGCATTGTGAATGGATTTTGGTATTTGTCTTCAGTTTTCAGTTCATCCCCTaGACCACAGTGGGCCTGCGC +
Preference number: 4 (lower is better)
Translates to: VQENGYRHCEWILVFVFSFQFIP*TTVGLR
Trigger: GCGCAGGCCCACTGTGGTGCAGGGGATGAACTGAAA...ACTGAAGACAAATACCAAAATCCATTCACAATGCCGGTAGCCATTCTCTTGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000481600.5
CDS-3UTR GCA 90 bp AATCCCAAACAGCTGGGTGTATGTCTCGTGTTCCCAATGACCTTAGCGCTTTCAGCTGTAATGAAGATCTaGCAGCACCCGGTGTTGTTT +
Preference number: 4 (lower is better)
Translates to: NPKQLGVCLVFPMTLALSAVMKI*QHPVLF
Trigger: AAACAACACCGGGTGCTGGCAGATCTTCATTACAGC...TGAAAGCGCTAAGGTCATTGGGAACACGAGACATACACCCAGCTGTTTGGGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp ACAGCTGTGGTACATGGAGGCCAGCCTGTGATGGATGGTTGCAGCTCGATACTGTCAACTTTCCAACATTaGTATTCTGACTGGTCATCT +
Preference number: 4 (lower is better)
Translates to: TAVVHGGQPVMDGCSSILSTFQH*YSDWSS
Trigger: AGATGACCAGTCAGAATAGCAATGTTGGAAAGTTGA...CAGTATCGAGCTGCAACCATCCATCACAGGCTGGCCTCCATGTACCACAGCTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp TTGATTCTTTCCAGAAGAGTCGCGGTTTTATTTGCAGTTGCTCTCAAAAGCTGGAGAAGCATCAGCAGCTaGAGCGGCGTCACCACTCTT +
Preference number: 4 (lower is better)
Translates to: LILSRRVAVLFAVALKSWRSISS*SGVTTL
Trigger: AAGAGTGGTGACGCCGCTGCAGCTGCTGATGCTTCT...CCAGCTTTTGAGAGCAACTGCAAATAAAACCGCGACTCTTCTGGAAAGAATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp CAAGTGAAGAAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTACTGAACGGCATTGCTaGTCGCTGCACTGCCGGCGG +
Preference number: 4 (lower is better)
Translates to: QVKKPQNSTVICLSLKITTERHC*SLHCRR
Trigger: CCGCCGGCAGTGCAGCGAGCAGCAATGCCGTTCAGT...AGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTTCTTCACTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR GCA 90 bp TCAAATATACTGAGGAGTTTCATCACTTCTTCTCGATTGAGACTAGGAGAAGCAGTCACTGAACGGCATTaGTGCTCGCTGCACTGCCGG +
Preference number: 4 (lower is better)
Translates to: SNILRSFITSSRLRLGEAVTERH*CSLHCR
Trigger: CCGGCAGTGCAGCGAGCAGCAATGCCGTTCAGTGAC...TGCTTCTCCTAGTCTCAATCGAGAAGAAGTGATGAAACTCCTCAGTATATTTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp GATCTCCTGGTCTTCTTTTGTTTGGTAATGAAACTCTTCAAGGTGTGCTGCTCTCGCACTTCCGGTCTCTaGCAGGAAGAAGTAGCTGTG +
Preference number: 4 (lower is better)
Translates to: DLLVFFCLVMKLFKVCCSRTSGL*QEEVAV
Trigger: CACAGCTACTTCTTCCTGGCAGAGACCGGAAGTGCG...AGAGCAGCACACCTTGAAGAGTTTCATTACCAAACAAAAGAAGACCAGGAGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
CDS-3UTR GCA 90 bp AGCTGGCCCAGCAGGTGGACGATAACGTTGATTCTTTCCAGAAGAGTCGCGGTTTGTAGACAAATCAGTTaGCCATGCAAATCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: SWPSRWTITLILSRRVAVCRQIS*PCKSFR
Trigger: TCTGAAGGATTTGCATGGGCAACTGATTTGTCTACA...AACCGCGACTCTTCTGGAAAGAATCAACGTTATCGTCCACCTGCTGGGCCAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000419769.6
CDS-3UTR CCA 90 bp CAAGTGAAGAAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCGGCTCCGGCCTCCTTaGCATCCCCCATCACTTCGA +
Preference number: 4 (lower is better)
Translates to: QVKKPQNSTVICLSLKITRLRPP*HPPSLR
Trigger: TCGAAGTGATGGGGGATGCCAAGGAGGCCGGAGCCG...AGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTTCTTCACTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR CCA 90 bp GGGCGGCATTGGTGGCATCCTCAATTGATTCAAAGTTGTGAATTCCCTTTTCAACTGCTGGCCCTAGTTTaGCACTCTCTCGTAACCAGT +
Preference number: 4 (lower is better)
Translates to: GRHWWHPQLIQSCEFPFQLLALV*HSLVTS
Trigger: ACTGGTTACGAGAGAGTGCCAAACTAGGGCCAGCAG...TTGAAAAGGGAATTCACAACTTTGAATCAATTGAGGATGCCACCAATGCCGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CCA 90 bp AGCTGGCCCAGCAGGTGGACGATAACGTTGATTCTTTCCAGAAGAGTCGCGGTTGAGCCGACCAACATATaGATATCTTCAAATGTCCAT +
Preference number: 4 (lower is better)
Translates to: SWPSRWTITLILSRRVAVEPTNI*ISSNVH
Trigger: ATGGACATTTGAAGATATCCATATGTTGGTCGGCTC...AACCGCGACTCTTCTGGAAAGAATCAACGTTATCGTCCACCTGCTGGGCCAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CCA 90 bp AACAAAGCACCGAATGAACAAACCGGCTCCGTGTTGAAGGCACTGACAGCGTGTCTGATGGATCAGAGCTaGTGCTATAGGATCCATTTT +
Preference number: 4 (lower is better)
Translates to: NKAPNEQTGSVLKALTACLMDQS*CYRIHF
Trigger: AAAATGGATCCTATAGCACCAGCTCTGATCCATCAG...ACACGCTGTCAGTGCCTTCAACACGGAGCCGGTTTGTTCATTCGGTGCTTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
CDS-3UTR CCA 90 bp GCGGCGTCACCACTCTTAGGCTGGCCAAATTCTTCTATAAGCTCCTTCTGGATACGCTCTTCTGTGTCATaGCAAACTGGAAATGCACAA +
Preference number: 4 (lower is better)
Translates to: AASPLLGWPNSSISSFWIRSSVS*QTGNAQ
Trigger: TTGTGCATTTCCAGTTTGCCATGACACAGAAGAGCG...TATCCAGAAGGAGCTTATAGAAGAATTTGGCCAGCCTAAGAGTGGTGACGCCGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CCA 90 bp AAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCTGTGTTTCTCCCCTGCACCACAGTaGGCCTGCGCACAAATCCGC +
Preference number: 4 (lower is better)
Translates to: KPQNSTVICLSLKITLCFSPAPQ*ACAQIR
Trigger: GCGGATTTGTGCGCAGGCCCACTGTGGTGCAGGGGA...GAAACACAGAGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
CDS-3UTR CCA 90 bp CCATTATATCAAGAGCCCCAGATAGTGTTTTCAACTTTCCAACATTGCTATTCTTCCCCTGCACCACAGTaGGCCTGCGCACAAATCCGC +
Preference number: 4 (lower is better)
Translates to: PLYQEPQIVFSTFQHCYSSPAPQ*ACAQIR
Trigger: GCGGATTTGTGCGCAGGCCCACTGTGGTGCAGGGGA...AGAATAGCAATGTTGGAAAGTTGAAAACACTATCTGGGGCTCTTGATATAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CCA 90 bp AGTTTCTTCACAAAGAGTAGTGAGGTCATAGAGCTTCACTATATCGCTGCCACTGACAGCTGTGGTACATaGAGGCCAGCCTGTGATGGA +
Preference number: 4 (lower is better)
Translates to: SFFTKSSEVIELHYIAATDSCGT*RPACDG
Trigger: TCCATCACAGGCTGGCCTCCATGTACCACAGCTGTC...AGTGGCAGCGATATAGTGAAGCTCTATGACCTCACTACTCTTTGTGAAGAAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481600.5
CDS-3UTR CCA 90 bp AGCATCTTTCAGCAGCTGAAACAGCTTTGCGGCCTTGCTGTAATGAAGATCTGCTCCTTCTGGATAAGCTaGAATGCGTGCTCAGTTCTC +
Preference number: 4 (lower is better)
Translates to: SIFQQLKQLCGLAVMKICSFWIS*NACSVL
Trigger: GAGAACTGAGCACGCATTCCAGCTTATCCAGAAGGA...GCAGATCTTCATTACAGCAAGGCCGCAAAGCTGTTTCAGCTGCTGAAAGATGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CCA 90 bp GGCGTCACCACTCTTAGGCTGGCCAAATTCTTCTATAAGCTCCTTCTGGATAAGTCCTTCTGGATAAGCTaGAATGCGTGCTCAGTTCTC +
Preference number: 4 (lower is better)
Translates to: GVTTLRLAKFFYKLLLDKSFWIS*NACSVL
Trigger: GAGAACTGAGCACGCATTCCAGCTTATCCAGAAGGA...CTTATCCAGAAGGAGCTTATAGAAGAATTTGGCCAGCCTAAGAGTGGTGACGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CCA 90 bp GACACTGAATCCACATCGCAGTATTTTAGGGACTTCATCATGGCCTCACTGACTAGCTGGCCCAGCAGGTaGACGATAACGTTGATTCTT +
Preference number: 4 (lower is better)
Translates to: DTESTSQYFRDFIMASLTSWPSR*TITLIL
Trigger: AAGAATCAACGTTATCGTCCACCTGCTGGGCCAGCT...AGTCAGTGAGGCCATGATGAAGTCCCTAAAATACTGCGATGTGGATTCAGTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CCA 90 bp CCCGTGTTACATAATAAAAGGGCGGCATTGGTGGCATCCTCAATTGATTCAAAGGCTCACTTCCCTGACTaGAAGCACTGGGATCTTCAG +
Preference number: 4 (lower is better)
Translates to: PVLHNKRAALVASSIDSKAHFPD*KHWDLQ
Trigger: CTGAAGATCCCAGTGCTTCCAGTCAGGGAAGTGAGC...CTTTGAATCAATTGAGGATGCCACCAATGCCGCCCTTTTATTATGTAACACGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CCA 90 bp AGTAGTGAGGTCATAGAGCTTCACTATATCGCTGCCACTTGCTTTAAAGAGCCATCAGGTTTTGTTCTTTaGGGGCTGAGGCCACATGCC +
Preference number: 4 (lower is better)
Translates to: SSEVIELHYIAATCFKEPSGFVL*GLRPHA
Trigger: GGCATGTGGCCTCAGCCCCCAAAGAACAAAACCTGA...TGGCTCTTTAAAGCAAGTGGCAGCGATATAGTGAAGCTCTATGACCTCACTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481600.5
ENST00000530795.1
CDS-3UTR TCA 90 bp GGATGGTTGCAGCTCGATACTGACAAAGGGGCTGTCGAGCAGACACTGAATCCACGGCTCCATCACCATTaGTACTGTAATATAAAAACT +
Preference number: 4 (lower is better)
Translates to: GWLQLDTDKGAVEQTLNPRLHHH*YCNIKT
Trigger: AGTTTTTATATTACAGTATCAATGGTGATGGAGCCG...TGGATTCAGTGTCTGCTCGACAGCCCCTTTGTCAGTATCGAGCTGCAACCATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR TCA 90 bp GCCCAGCAGGTGGACGATAACGTTGATTCTTTCCAGAAGAGTCGCGGTTTTATTATCATTTGTCTGATCTaGACTGGACGATTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: AQQVDDNVDSFQKSRGFIIICLI*TGRFLL
Trigger: CAGCAGGAATCGTCCAGTTCAGATCAGACAAATGAT...AATAAAACCGCGACTCTTCTGGAAAGAATCAACGTTATCGTCCACCTGCTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR TCA 90 bp GTGGAAGCTTTAAGTTTGATTCTGATGTTAGCACTTCAAGTGAAGAAGCCACAGGAAGGGAGCAGGCCATaGAGCCCCTTCCGAATCATT +
Preference number: 4 (lower is better)
Translates to: VEALSLILMLALQVKKPQEGSRP*SPFRII
Trigger: AATGATTCGGAAGGGGCTTCATGGCCTGCTCCCTTC...CTGTGGCTTCTTCACTTGAAGTGCTAACATCAGAATCAAACTTAAAGCTTCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR TCA 90 bp CTCTTAGGCTGGCCAAATTCTTCTATAAGCTCCTTCTGGATAAGCTGGAATGCGGGGATCTTCAGAAACTaGAGAAGGCATTTCGAAGGG +
Preference number: 4 (lower is better)
Translates to: LLGWPNSSISSFWISWNAGIFRN*RRHFEG
Trigger: CCCTTCGAAATGCCTTCTTCAGTTTCTGAAGATCCC...CGCATTCCAGCTTATCCAGAAGGAGCTTATAGAAGAATTTGGCCAGCCTAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR TCA 90 bp CATTCCAGATTGACTGGAATAATTGCCCTTCTGAAGGGAGCCCATTTTGTCCAAGCTCTTCCGTATTTCTaGAGACTCATGGCAGCATCG +
Preference number: 4 (lower is better)
Translates to: HSRLTGIIALLKGAHFVQALPYF*RLMAAS
Trigger: CGATGCTGCCATGAGTCTTCAGAAATACGGAAGAGC...TTGGACAAAATGGGCTCCCTTCAGAAGGGCAATTATTCCAGTCAATCTGGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
CDS-3UTR TCA 90 bp CATGTTGCAAGCAACCTTGTACAAGAGAATGGCTACCGGCATTGTGAATGGATTCAATTCCCAGTTCACTaGATCCCAAACAGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: HVASNLVQENGYRHCEWIQFPVH*IPNSWV
Trigger: CACCCAGCTGTTTGGGATTCAGTGAACTGGGAATTG...AATCCATTCACAATGCCGGTAGCCATTCTCTTGTACAAGGTTGCTTGCAACATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481600.5
CDS-3UTR TCA 90 bp GGATGGTTGCAGCTCGATACTGACAAAGGGGCTGTCGAGCAGACACTGAATCCAGAGACTCAAATATACTaGGGAGTTTCATCACTTCTT +
Preference number: 4 (lower is better)
Translates to: GWLQLDTDKGAVEQTLNPETQIY*GVSSLL
Trigger: AAGAAGTGATGAAACTCCTCAGTATATTTGAGTCTC...TGGATTCAGTGTCTGCTCGACAGCCCCTTTGTCAGTATCGAGCTGCAACCATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR TCA 90 bp AACAAAGCACCGAATGAACAAACCGGCTCCGTGTTGAAGGCACTGACAGCGTGTAGCAGTTTAATGGACTaGAGGAGAAGAAATGACAAC +
Preference number: 4 (lower is better)
Translates to: NKAPNEQTGSVLKALTACSSLMD*RRRNDN
Trigger: GTTGTCATTTCTTCTCCTTCAGTCCATTAAACTGCT...ACACGCTGTCAGTGCCTTCAACACGGAGCCGGTTTGTTCATTCGGTGCTTTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
ENST00000525358.1
CDS-3UTR TCA 90 bp AACAAAGCACCGAATGAACAAACCGGCTCCGTGTTGAAGGCACTGACAGCGTGTTGTGCTTGTTGGTTTTaGGAATTGTGTCATCTTCGA +
Preference number: 4 (lower is better)
Translates to: NKAPNEQTGSVLKALTACCACWF*ELCHLR
Trigger: TCGAAGATGACACAATTCTCAAAACCAACAAGCACA...ACACGCTGTCAGTGCCTTCAACACGGAGCCGGTTTGTTCATTCGGTGCTTTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
ENST00000525358.1
CDS-3UTR TCA 90 bp AGCTGGCCCAGCAGGTGGACGATAACGTTGATTCTTTCCAGAAGAGTCGCGGTTACTCTGTGTTTCCACTaGTATACCTGTTTTAAATGG +
Preference number: 4 (lower is better)
Translates to: SWPSRWTITLILSRRVAVTLCFH*YTCFKW
Trigger: CCATTTAAAACAGGTATATCAGTGGAAACACAGAGT...AACCGCGACTCTTCTGGAAAGAATCAACGTTATCGTCCACCTGCTGGGCCAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368815.6
CDS-3UTR GCA 90 bp GCGGCGTCACCACTCTTAGGCTGGCCAAATTCTTCTATAAGCTCCTTCTGGATAGGCTCTTCACTTCATTaGCTCCAAGAAATAAAGCTG +
Preference number: 4 (lower is better)
Translates to: AASPLLGWPNSSISSFWIGSSLH*LQEIKL
Trigger: CAGCTTTATTTCTTGGAGGCAATGAAGTGAAGAGCC...TATCCAGAAGGAGCTTATAGAAGAATTTGGCCAGCCTAAGAGTGGTGACGCCGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp GATCTCCTGGTCTTCTTTTGTTTGGTAATGAAACTCTTCAAGGTGTGCTGCTCTGAACTGGACGATTCCTaGTGTTCTGCGGTGGATGAG +
Preference number: 4 (lower is better)
Translates to: DLLVFFCLVMKLFKVCCSELDDS*CSAVDE
Trigger: CTCATCCACCGCAGAACAGCAGGAATCGTCCAGTTC...AGAGCAGCACACCTTGAAGAGTTTCATTACCAAACAAAAGAAGACCAGGAGATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
CDS-3UTR GCA 90 bp CTTCTGGATAAGCTGGAATGCGTGCTCAGTTCTCACCATTATATCAAGAGCCCCCAAGCTCTGGCACATTaGATATCAAGTTGTCCAACC +
Preference number: 4 (lower is better)
Translates to: LLDKLECVLSSHHYIKSPQALAH*ISSCPT
Trigger: GGTTGGACAACTTGATATGCAATGTGCCAGAGCTTG...GGGGCTCTTGATATAATGGTGAGAACTGAGCACGCATTCCAGCTTATCCAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp AAAGGGCGGCATTGGTGGCATCCTCAATTGATTCAAAGTTGTGAATTCCCTTTTAGTGCTGGGGTCAGCTaGTGGAAGGTCGCTTTCTTT +
Preference number: 4 (lower is better)
Translates to: KGRHWWHPQLIQSCEFPFSAGVS*WKVAFF
Trigger: AAAGAAAGCGACCTTCCAGCAGCTGACCCCAGCACT...AAAAGGGAATTCACAACTTTGAATCAATTGAGGATGCCACCAATGCCGCCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp GCAACTGGACTCTCTGTGAAGGCTATGCAGGATCTCCTGGTCTTCTTTTGTTTGATTGACTGGAATAATTaGCCTTCTGAAGGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: ATGLSVKAMQDLLVFFCLIDWNN*PSEGSP
Trigger: TGGGCTCCCTTCAGAAGGGCAATTATTCCAGTCAAT...CAAACAAAAGAAGACCAGGAGATCCTGCATAGCCTTCACAGAGAGTCCAGTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
CDS-3UTR GCA 90 bp CAGCTGAAACAGCTTTGCGGCCTTGCTGTAATGAAGATCTGCCAGCACCCGGTGAAACTCTTCAAGGTGTaGTGCTCTATTATTTGCATT +
Preference number: 4 (lower is better)
Translates to: QLKQLCGLAVMKICQHPVKLFKV*CSIICI
Trigger: AATGCAAATAATAGAGCAGCACACCTTGAAGAGTTT...CACCGGGTGCTGGCAGATCTTCATTACAGCAAGGCCGCAAAGCTGTTTCAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp GGCGTCACCACTCTTAGGCTGGCCAAATTCTTCTATAAGCTCCTTCTGGATAAGCAGCAGACACAGATTTaGTCACTAGTCTCTCACTCT +
Preference number: 4 (lower is better)
Translates to: GVTTLRLAKFFYKLLLDKQQTQI*SLVSHS
Trigger: AGAGTGAGAGACTAGTGAGCAAATCTGTGTCTGCTG...CTTATCCAGAAGGAGCTTATAGAAGAATTTGGCCAGCCTAAGAGTGGTGACGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp GGCGTCACCACTCTTAGGCTGGCCAAATTCTTCTATAAGCTCCTTCTGGATAAGTTTTTCCACAACTGTTaGTCGGCAGCAGACACAGAT +
Preference number: 4 (lower is better)
Translates to: GVTTLRLAKFFYKLLLDKFFHNC*SAADTD
Trigger: ATCTGTGTCTGCTGCCGAGCAACAGTTGTGGAAAAA...CTTATCCAGAAGGAGCTTATAGAAGAATTTGGCCAGCCTAAGAGTGGTGACGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp AAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCTGTGTTTCGCACCACAGTGGGCCTaGGCACAAATCCGCATGAGC +
Preference number: 4 (lower is better)
Translates to: KPQNSTVICLSLKITLCFAPQWA*AQIRMS
Trigger: GCTCATGCGGATTTGTGCGCAGGCCCACTGTGGTGC...GAAACACAGAGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
CDS-3UTR GCA 90 bp ATAACGTTGATTCTTTCCAGAAGAGTCGCGGTTTTATTTGCAGTTGCTCTCAAATTTCAGTTCATCCCCTaGACCACAGTGGGCCTGCGC +
Preference number: 4 (lower is better)
Translates to: ITLILSRRVAVLFAVALKFQFIP*TTVGLR
Trigger: GCGCAGGCCCACTGTGGTGCAGGGGATGAACTGAAA...TTTGAGAGCAACTGCAAATAAAACCGCGACTCTTCTGGAAAGAATCAACGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp GACACTGAATCCACATCGCAGTATTTTAGGGACTTCATCATGGCCTCACTGACTACAGCTTTGCGGCCTTaGTGTAATGAAGATCTGCCA +
Preference number: 4 (lower is better)
Translates to: DTESTSQYFRDFIMASLTTALRP*CNEDLP
Trigger: TGGCAGATCTTCATTACAGCAAGGCCGCAAAGCTGT...AGTCAGTGAGGCCATGATGAAGTCCCTAAAATACTGCGATGTGGATTCAGTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp CTCTTAGGCTGGCCAAATTCTTCTATAAGCTCCTTCTGGATAAGCTGGAATGCGCTGGATAAGCTGGAATaGGTGCTCAGTTCTCACCAT +
Preference number: 4 (lower is better)
Translates to: LLGWPNSSISSFWISWNALDKLE*VLSSHH
Trigger: ATGGTGAGAACTGAGCACGCATTCCAGCTTATCCAG...CGCATTCCAGCTTATCCAGAAGGAGCTTATAGAAGAATTTGGCCAGCCTAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp GCGGCGTCACCACTCTTAGGCTGGCCAAATTCTTCTATAAGCTCCTTCTGGATAAGTCGCGGTTTTATTTaGAGTTGCTCTCAAAAGCTG +
Preference number: 4 (lower is better)
Translates to: AASPLLGWPNSSISSFWISRGFI*SCSQKL
Trigger: CAGCTTTTGAGAGCAACTGCAAATAAAACCGCGACT...TATCCAGAAGGAGCTTATAGAAGAATTTGGCCAGCCTAAGAGTGGTGACGCCGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp CAAGTGAAGAAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTGTCACTGAACGGCATTaGTGCTCGCTGCACTGCCGG +
Preference number: 4 (lower is better)
Translates to: QVKKPQNSTVICLSLKITVTERH*CSLHCR
Trigger: CCGGCAGTGCAGCGAGCAGCAATGCCGTTCAGTGAC...AGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTTCTTCACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR CCA 90 bp ATGTTGCAAGCAACCTTGTACAAGAGAATGGCTACCGGCATTGTGAATGGATTTCTGCTGGCCCTAGTTTaGCACTCTCTCGTAACCAGT +
Preference number: 4 (lower is better)
Translates to: MLQATLYKRMATGIVNGFLLALV*HSLVTS
Trigger: ACTGGTTACGAGAGAGTGCCAAACTAGGGCCAGCAG...AAATCCATTCACAATGCCGGTAGCCATTCTCTTGTACAAGGTTGCTTGCAACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481600.5
CDS-3UTR CCA 90 bp CAAGTGAAGAAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCCTGCTGTTCTGCGGTaGATGAGACAGGCTGAGCGG +
Preference number: 4 (lower is better)
Translates to: QVKKPQNSTVICLSLKITPAVLR*MRQAER
Trigger: CCGCTCAGCCTGTCTCATCCACCGCAGAACAGCAGG...AGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTTCTTCACTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR CCA 90 bp AAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCTGTGTTTCCCTGCTGTTCTGCGGTaGATGAGACAGGCTGAGCGG +
Preference number: 4 (lower is better)
Translates to: KPQNSTVICLSLKITLCFPAVLR*MRQAER
Trigger: CCGCTCAGCCTGTCTCATCCACCGCAGAACAGCAGG...GAAACACAGAGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
CDS-3UTR CCA 90 bp CTTCTGGATAAGCTGGAATGCGTGCTCAGTTCTCACCATTATATCAAGAGCCCCTTGTCTGATCTGAACTaGACGATTCCTGCTGTTCTG +
Preference number: 4 (lower is better)
Translates to: LLDKLECVLSSHHYIKSPLSDLN*TIPAVL
Trigger: CAGAACAGCAGGAATCGTCCAGTTCAGATCAGACAA...GGGGCTCTTGATATAATGGTGAGAACTGAGCACGCATTCCAGCTTATCCAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CCA 90 bp TTCACAAAGAGTAGTGAGGTCATAGAGCTTCACTATATCGCTGCCACTTGCTTTTGCCTCCTCCAAATATaGGCATGTTGGAGCCGACCA +
Preference number: 4 (lower is better)
Translates to: FTKSSEVIELHYIAATCFCLLQI*ACWSRP
Trigger: TGGTCGGCTCCAACATGCCCATATTTGGAGGAGGCA...AAAGCAAGTGGCAGCGATATAGTGAAGCTCTATGACCTCACTACTCTTTGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481600.5
ENST00000530795.1
CDS-3UTR CCA 90 bp AACAAAGCACCGAATGAACAAACCGGCTCCGTGTTGAAGGCACTGACAGCGTGTACACATCACAAGCTCTaGCACATTGCATATCAAGTT +
Preference number: 4 (lower is better)
Translates to: NKAPNEQTGSVLKALTACTHHKL*HIAYQV
Trigger: AACTTGATATGCAATGTGCCAGAGCTTGTGATGTGT...ACACGCTGTCAGTGCCTTCAACACGGAGCCGGTTTGTTCATTCGGTGCTTTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
CDS-3UTR CCA 90 bp AGCGGCGTCACCACTCTTAGGCTGGCCAAATTCTTCTATAAGCTCCTTCTGGATCTGATGGATCAGAGCTaGTGCTATAGGATCCATTTT +
Preference number: 4 (lower is better)
Translates to: SGVTTLRLAKFFYKLLLDLMDQS*CYRIHF
Trigger: AAAATGGATCCTATAGCACCAGCTCTGATCCATCAG...ATCCAGAAGGAGCTTATAGAAGAATTTGGCCAGCCTAAGAGTGGTGACGCCGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CCA 90 bp AGCATCTTTCAGCAGCTGAAACAGCTTTGCGGCCTTGCTGTAATGAAGATCTGCCTTCGGAAAGCATATTaGTGCAGAGGCAGCAATAAG +
Preference number: 4 (lower is better)
Translates to: SIFQQLKQLCGLAVMKICLRKAY*CRGSNK
Trigger: CTTATTGCTGCCTCTGCACCAATATGCTTTCCGAAG...GCAGATCTTCATTACAGCAAGGCCGCAAAGCTGTTTCAGCTGCTGAAAGATGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CCA 90 bp TGTATCGTAATGCTCTTCCGTATTTCTGAAGACTCATGGCAGCATCGGACAAAACCAGCCTGTGATGGATaGTTGCAGCTCGATACTGAC +
Preference number: 4 (lower is better)
Translates to: CIVMLFRISEDSWQHRTKPACDG*LQLDTD
Trigger: GTCAGTATCGAGCTGCAACCATCCATCACAGGCTGG...TTTTGTCCGATGCTGCCATGAGTCTTCAGAAATACGGAAGAGCATTACGATACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
3UTR CAA 72 bp TCAAATATACTGAGGAGTTTCATCACTTCTTCTCGATaGAGACTAGGAGAAGCATCAGCAGCTGCAGCGGCG +
Preference number: 4 (lower is better)
Translates to: SNILRSFITSSR*RLGEASAAAAA
Trigger: CGCCGCTGCAGCTGCTGATGCTTCTCCTAGTCTCAATCGAGAAGAAGTGATGAAACTCCTCAGTATATTTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR TCA 90 bp GGCGTCACCACTCTTAGGCTGGCCAAATTCTTCTATAAGCTCCTTCTGGATAAGTGCCATGCCAAAGCTTaGAAATGGCTTGCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: GVTTLRLAKFFYKLLLDKCHAKA*KWLAFL
Trigger: AAGAAAAGCAAGCCATTTTCAAGCTTTGGCATGGCA...CTTATCCAGAAGGAGCTTATAGAAGAATTTGGCCAGCCTAAGAGTGGTGACGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR TCA 90 bp CAAGTGAAGAAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTGTGGATGAGACAGGCTaGGCGGCTCCATCACCATTG +
Preference number: 4 (lower is better)
Translates to: QVKKPQNSTVICLSLKITVDETG*AAPSPL
Trigger: CAATGGTGATGGAGCCGCTCAGCCTGTCTCATCCAC...AGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTTCTTCACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR TCA 90 bp CTCTTAGGCTGGCCAAATTCTTCTATAAGCTCCTTCTGGATAAGCTGGAATGCGTCCGAATCATTTGTCTaGTCTGAACTGGACGATTCC +
Preference number: 4 (lower is better)
Translates to: LLGWPNSSISSFWISWNASESFV*SELDDS
Trigger: GGAATCGTCCAGTTCAGATCAGACAAATGATTCGGA...CGCATTCCAGCTTATCCAGAAGGAGCTTATAGAAGAATTTGGCCAGCCTAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR TCA 90 bp CATCATCATGTTGCAAGCAACCTTGTACAAGAGAATGGCTACCGGCATTGTGAAGGGATCTTCAGAAACTaGAGAAGGCATTTCGAAGGG +
Preference number: 4 (lower is better)
Translates to: HHHVASNLVQENGYRHCEGIFRN*RRHFEG
Trigger: CCCTTCGAAATGCCTTCTTCAGTTTCTGAAGATCCC...TTCACAATGCCGGTAGCCATTCTCTTGTACAAGGTTGCTTGCAACATGATGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481600.5
ENST00000530795.1
CDS-3UTR TCA 90 bp CCCCAGATAGTGTTTTCAACTTTCCAACATTGCTATTCTGACTGGTCATCTGAACAACTGGACTCTCTGTaGAGGCTATGCAGGATCTCC +
Preference number: 4 (lower is better)
Translates to: PQIVFSTFQHCYSDWSSEQLDSL*RLCRIS
Trigger: GGAGATCCTGCATAGCCTTCACAGAGAGTCCAGTTG...TTCAGATGACCAGTCAGAATAGCAATGTTGGAAAGTTGAAAACACTATCTGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR TCA 90 bp GTGGAAGCTTTAAGTTTGATTCTGATGTTAGCACTTCAAGTGAAGAAGCCACAGGCGCACAAATCCGCATaGGCCTTCCCGTGTTACATA +
Preference number: 4 (lower is better)
Translates to: VEALSLILMLALQVKKPQAHKSA*AFPCYI
Trigger: TATGTAACACGGGAAGGCTCATGCGGATTTGTGCGC...CTGTGGCTTCTTCACTTGAAGTGCTAACATCAGAATCAAACTTAAAGCTTCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR TCA 90 bp AACAAAGCACCGAATGAACAAACCGGCTCCGTGTTGAAGGCACTGACAGCGTGTGAGACTCAAATATACTaGGGAGTTTCATCACTTCTT +
Preference number: 4 (lower is better)
Translates to: NKAPNEQTGSVLKALTACETQIY*GVSSLL
Trigger: AAGAAGTGATGAAACTCCTCAGTATATTTGAGTCTC...ACACGCTGTCAGTGCCTTCAACACGGAGCCGGTTTGTTCATTCGGTGCTTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
CDS-3UTR TCA 90 bp AAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCTGTGTTTCGCTCTGTGCAGTCACTaGACGGCATTGCTGCTCGCT +
Preference number: 4 (lower is better)
Translates to: KPQNSTVICLSLKITLCFALCSH*TALLLA
Trigger: AGCGAGCAGCAATGCCGTTCAGTGACTGCACAGAGC...GAAACACAGAGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
CDS-3UTR TCA 90 bp GTTGATTCTTTCCAGAAGAGTCGCGGTTTTATTTGCAGTTGCTCTCAAAAGCTGATGCCCCACTATGTATaGGGGTTCAAGAGGCTCACT +
Preference number: 4 (lower is better)
Translates to: VDSFQKSRGFICSCSQKLMPHYV*GFKRLT
Trigger: AGTGAGCCTCTTGAACCCTCATACATAGTGGGGCAT...CAGCTTTTGAGAGCAACTGCAAATAAAACCGCGACTCTTCTGGAAAGAATCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR TCA 90 bp TTGATTCTTTCCAGAAGAGTCGCGGTTTTATTTGCAGTTGCTCTCAAAAGCTGGGGTTACACACTGTGCTaGGGTAAGAGGGAGGGATAT +
Preference number: 4 (lower is better)
Translates to: LILSRRVAVLFAVALKSWGYTLC*GKREGY
Trigger: ATATCCCTCCCTCTTACCTCAGCACAGTGTGTAACC...CCAGCTTTTGAGAGCAACTGCAAATAAAACCGCGACTCTTCTGGAAAGAATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000419769.6
CDS-3UTR GCA 90 bp GTGGAAGCTTTAAGTTTGATTCTGATGTTAGCACTTCAAGTGAAGAAGCCACAGGAACTGGACGATTCCTaGTGTTCTGCGGTGGATGAG +
Preference number: 4 (lower is better)
Translates to: VEALSLILMLALQVKKPQELDDS*CSAVDE
Trigger: CTCATCCACCGCAGAACAGCAGGAATCGTCCAGTTC...CTGTGGCTTCTTCACTTGAAGTGCTAACATCAGAATCAAACTTAAAGCTTCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR GCA 90 bp TTGATTCTTTCCAGAAGAGTCGCGGTTTTATTTGCAGTTGCTCTCAAAAGCTGGAAAAACAAGGCCATCTaGTTCTCTAGCCCCTCGGGA +
Preference number: 4 (lower is better)
Translates to: LILSRRVAVLFAVALKSWKNKAI*FSSPSG
Trigger: TCCCGAGGGGCTAGAGAAGCAGATGGCCTTGTTTTT...CCAGCTTTTGAGAGCAACTGCAAATAAAACCGCGACTCTTCTGGAAAGAATCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp AGGTGGACGATAACGTTGATTCTTTCCAGAAGAGTCGCGGTTTTATTTGCAGTTAAAAACAAGGCCATCTaGTTCTCTAGCCCCTCGGGA +
Preference number: 4 (lower is better)
Translates to: RWTITLILSRRVAVLFAVKNKAI*FSSPSG
Trigger: TCCCGAGGGGCTAGAGAAGCAGATGGCCTTGTTTTT...AACTGCAAATAAAACCGCGACTCTTCTGGAAAGAATCAACGTTATCGTCCACCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp AACAAAGCACCGAATGAACAAACCGGCTCCGTGTTGAAGGCACTGACAGCGTGTAGTTTCATTTTATGTTaGCAAGAGCCAGGGATCATT +
Preference number: 4 (lower is better)
Translates to: NKAPNEQTGSVLKALTACSFILC*QEPGII
Trigger: AATGATCCCTGGCTCTTGGCAACATAAAATGAAACT...ACACGCTGTCAGTGCCTTCAACACGGAGCCGGTTTGTTCATTCGGTGCTTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
CDS-3UTR GCA 90 bp AGCATCTTTCAGCAGCTGAAACAGCTTTGCGGCCTTGCTGTAATGAAGATCTGCCGGAAAGCATATTGGTaGAGAGGCAGCAATAAGTAT +
Preference number: 4 (lower is better)
Translates to: SIFQQLKQLCGLAVMKICRKAYW*RGSNKY
Trigger: ATACTTATTGCTGCCTCTGCACCAATATGCTTTCCG...GCAGATCTTCATTACAGCAAGGCCGCAAAGCTGTTTCAGCTGCTGAAAGATGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp CTAAGCACAAGTCTACAGCGCTCTTCTGTGTCATGGCAAACTGGAAATGCACAACAAATCAGTTGCCCATaGAAATCCTTGGCAACTGGA +
Preference number: 4 (lower is better)
Translates to: LSTSLQRSSVSWQTGNAQQISCP*KSLATG
Trigger: TCCAGTTGCCAAGGATTTGCATGGGCAACTGATTTG...TTGTGCATTTCCAGTTTGCCATGACACAGAAGAGCGCTGTAGACTTGTGCTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481600.5
CDS-3UTR GCA 90 bp AATCCCAAACAGCTGGGTGTATGTCTCGTGTTCCCAATGACCTTAGCGCTTTCATGTAGACAAATCAGTTaGCCATGCAAATCCTTGGCA +
Preference number: 4 (lower is better)
Translates to: NPKQLGVCLVFPMTLALSCRQIS*PCKSLA
Trigger: TGCCAAGGATTTGCATGGGCAACTGATTTGTCTACA...TGAAAGCGCTAAGGTCATTGGGAACACGAGACATACACCCAGCTGTTTGGGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
CDS-3UTR GCA 90 bp AACAAAGCACCGAATGAACAAACCGGCTCCGTGTTGAAGGCACTGACAGCGTGTTTCAAGTCACTAAACTaGAAGATTTCATTAGCAGCC +
Preference number: 4 (lower is better)
Translates to: NKAPNEQTGSVLKALTACFKSLN*KISLAA
Trigger: GGCTGCTAATGAAATCTTGCAGTTTAGTGACTTGAA...ACACGCTGTCAGTGCCTTCAACACGGAGCCGGTTTGTTCATTCGGTGCTTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
CDS-3UTR GCA 90 bp TATTTTGATTCTTCTTCATCATCATGTTGCAAGCAACCTTGTACAAGAGAATGGGCACCACAGTGGGCCTaGGCACAAATCCGCATGAGC +
Preference number: 4 (lower is better)
Translates to: YFDSSSSSCCKQPCTREWAPQWA*AQIRMS
Trigger: GCTCATGCGGATTTGTGCGCAGGCCCACTGTGGTGC...CCATTCTCTTGTACAAGGTTGCTTGCAACATGATGATGAAGAAGAATCAAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481600.5
CDS-3UTR GCA 90 bp CAAGTGAAGAAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTTTTCAGTTCATCCCCTaGACCACAGTGGGCCTGCGC +
Preference number: 4 (lower is better)
Translates to: QVKKPQNSTVICLSLKITFQFIP*TTVGLR
Trigger: GCGCAGGCCCACTGTGGTGCAGGGGATGAACTGAAA...AGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTTCTTCACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR GCA 90 bp TGGAATGCGTGCTCAGTTCTCACCATTATATCAAGAGCCCCAGATAGTGTTTTCGCTGTAATGAAGATCTaGCAGCACCCGGTGTTGTTT +
Preference number: 4 (lower is better)
Translates to: WNACSVLTIISRAPDSVFAVMKI*QHPVLF
Trigger: AAACAACACCGGGTGCTGGCAGATCTTCATTACAGC...GAAAACACTATCTGGGGCTCTTGATATAATGGTGAGAACTGAGCACGCATTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp AACAAAGCACCGAATGAACAAACCGGCTCCGTGTTGAAGGCACTGACAGCGTGTTCAACTTTCCAACATTaGTATTCTGACTGGTCATCT +
Preference number: 4 (lower is better)
Translates to: NKAPNEQTGSVLKALTACSTFQH*YSDWSS
Trigger: AGATGACCAGTCAGAATAGCAATGTTGGAAAGTTGA...ACACGCTGTCAGTGCCTTCAACACGGAGCCGGTTTGTTCATTCGGTGCTTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
CDS-3UTR GCA 90 bp ATAACGTTGATTCTTTCCAGAAGAGTCGCGGTTTTATTTGCAGTTGCTCTCAAAAGAAGCATCAGCAGCTaGAGCGGCGTCACCACTCTT +
Preference number: 4 (lower is better)
Translates to: ITLILSRRVAVLFAVALKRSISS*SGVTTL
Trigger: AAGAGTGGTGACGCCGCTGCAGCTGCTGATGCTTCT...TTTGAGAGCAACTGCAAATAAAACCGCGACTCTTCTGGAAAGAATCAACGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp TTCTCACCATTATATCAAGAGCCCCAGATAGTGTTTTCAACTTTCCAACATTGCAGAAGCATCAGCAGCTaGAGCGGCGTCACCACTCTT +
Preference number: 4 (lower is better)
Translates to: FSPLYQEPQIVFSTFQHCRSISS*SGVTTL
Trigger: AAGAGTGGTGACGCCGCTGCAGCTGCTGATGCTTCT...GCAATGTTGGAAAGTTGAAAACACTATCTGGGGCTCTTGATATAATGGTGAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CCA 90 bp ATTCTTTCCAGAAGAGTCGCGGTTTTATTTGCAGTTGCTCTCAAAAGCTGGGAGTCTCTCGTAACCAGTTaGCAGGTGGGAGTTTCAAGT +
Preference number: 4 (lower is better)
Translates to: ILSRRVAVLFAVALKSWESLVTS*QVGVSS
Trigger: ACTTGAAACTCCCACCTGCCAACTGGTTACGAGAGA...CTCCCAGCTTTTGAGAGCAACTGCAAATAAAACCGCGACTCTTCTGGAAAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CCA 90 bp GTGGAAGCTTTAAGTTTGATTCTGATGTTAGCACTTCAAGTGAAGAAGCCACAGCTGCTGGCCCTAGTTTaGCACTCTCTCGTAACCAGT +
Preference number: 4 (lower is better)
Translates to: VEALSLILMLALQVKKPQLLALV*HSLVTS
Trigger: ACTGGTTACGAGAGAGTGCCAAACTAGGGCCAGCAG...CTGTGGCTTCTTCACTTGAAGTGCTAACATCAGAATCAAACTTAAAGCTTCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR CCA 90 bp ATTCTTTCCAGAAGAGTCGCGGTTTTATTTGCAGTTGCTCTCAAAAGCTGGGAGCCTGACTGGAAGCACTaGGATCTTCAGAAACTGAAG +
Preference number: 4 (lower is better)
Translates to: ILSRRVAVLFAVALKSWEPDWKH*DLQKLK
Trigger: CTTCAGTTTCTGAAGATCCCAGTGCTTCCAGTCAGG...CTCCCAGCTTTTGAGAGCAACTGCAAATAAAACCGCGACTCTTCTGGAAAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CCA 90 bp GTGGAAGCTTTAAGTTTGATTCTGATGTTAGCACTTCAAGTGAAGAAGCCACAGTGCCTCCTCCAAATATaGGCATGTTGGAGCCGACCA +
Preference number: 4 (lower is better)
Translates to: VEALSLILMLALQVKKPQCLLQI*ACWSRP
Trigger: TGGTCGGCTCCAACATGCCCATATTTGGAGGAGGCA...CTGTGGCTTCTTCACTTGAAGTGCTAACATCAGAATCAAACTTAAAGCTTCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR CCA 90 bp CACCCGGTGTTGTTTCCTAAGGTGTTCATCACCAACCTGATTCCTCAGACAGCTACACATCACAAGCTCTaGCACATTGCATATCAAGTT +
Preference number: 4 (lower is better)
Translates to: HPVLFPKVFITNLIPQTATHHKL*HIAYQV
Trigger: AACTTGATATGCAATGTGCCAGAGCTTGTGATGTGT...AGCTGTCTGAGGAATCAGGTTGGTGATGAACACCTTAGGAAACAACACCGGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CCA 90 bp AACAAAGCACCGAATGAACAAACCGGCTCCGTGTTGAAGGCACTGACAGCGTGTTACCGGCATTGTGAATaGATTTTGGTATTTGTCTTC +
Preference number: 4 (lower is better)
Translates to: NKAPNEQTGSVLKALTACYRHCE*ILVFVF
Trigger: GAAGACAAATACCAAAATCCATTCACAATGCCGGTA...ACACGCTGTCAGTGCCTTCAACACGGAGCCGGTTTGTTCATTCGGTGCTTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
CDS-3UTR CCA 90 bp AAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCTGTGTTTCACGGGATTGGAGTGCTaGGGTCAGCTGCTGGAAGGT +
Preference number: 4 (lower is better)
Translates to: KPQNSTVICLSLKITLCFTGLEC*GQLLEG
Trigger: ACCTTCCAGCAGCTGACCCCAGCACTCCAATCCCGT...GAAACACAGAGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
CDS-3UTR CCA 90 bp TTTTCCACAACTGTTGCTCGGCAGCAGACACAGATTTGCTCACTAGTCTCTCACATAAAAGGGCGGCATTaGTGGCATCCTCAATTGATT +
Preference number: 4 (lower is better)
Translates to: FSTTVARQQTQICSLVSHIKGRH*WHPQLI
Trigger: AATCAATTGAGGATGCCACCAATGCCGCCCTTTTAT...GTGAGAGACTAGTGAGCAAATCTGTGTCTGCTGCCGAGCAACAGTTGTGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CCA 90 bp AACAAAGCACCGAATGAACAAACCGGCTCCGTGTTGAAGGCACTGACAGCGTGTACCTGTAATGTCATCTaGATAAAAGTTCTCTTGACC +
Preference number: 4 (lower is better)
Translates to: NKAPNEQTGSVLKALTACTCNVI*IKVLLT
Trigger: GGTCAAGAGAACTTTTATCCAGATGACATTACAGGT...ACACGCTGTCAGTGCCTTCAACACGGAGCCGGTTTGTTCATTCGGTGCTTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR CCA 90 bp GTACAAGAGAATGGCTACCGGCATTGTGAATGGATTTTGGTATTTGTCTTCAGTGCTCACTTCCCTGACTaGAAGCACTGGGATCTTCAG +
Preference number: 4 (lower is better)
Translates to: VQENGYRHCEWILVFVFSAHFPD*KHWDLQ
Trigger: CTGAAGATCCCAGTGCTTCCAGTCAGGGAAGTGAGC...ACTGAAGACAAATACCAAAATCCATTCACAATGCCGGTAGCCATTCTCTTGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481600.5
ENST00000530795.1
3UTR CAA 72 bp CATTTTATGTTGCCAAGAGCCAGGGATCATTCCAGATaGACTGGAATAATTGCCCTTCTGAAGGGAGCCCAT +
Preference number: 4 (lower is better)
Translates to: HFMLPRARDHSR*TGIIALLKGAH
Trigger: ATGGGCTCCCTTCAGAAGGGCAATTATTCCAGTCAATCTGGAATGATCCCTGGCTCTTGGCAACATAAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
CDS-3UTR TCA 90 bp CAAAGGGGCTGTCGAGCAGACACTGAATCCACATCGCAGTATTTTAGGGACTTCCACATCATTTCCCACTaGATCAATAAAGTCATATGC +
Preference number: 4 (lower is better)
Translates to: QRGCRADTESTSQYFRDFHIISH*INKVIC
Trigger: GCATATGACTTTATTGATTCAGTGGGAAATGATGTG...GAAGTCCCTAAAATACTGCGATGTGGATTCAGTGTCTGCTCGACAGCCCCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR TCA 90 bp TTGAGGATTCATCTTCATATTTTAACGGGATTGGAGTGCTGGGGTCAGCTGCTGGAAAGAATTGCCTTTTaGTACCAGTGCTCTTTGCTC +
Preference number: 4 (lower is better)
Translates to: LRIHLHILTGLECWGQLLERIAF*YQCSLL
Trigger: GAGCAAAGAGCACTGGTATCAAAAGGCAATTCTTTC...CAGCAGCTGACCCCAGCACTCCAATCCCGTTAAAATATGAAGATGAATCCTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
CDS-3UTR TCA 90 bp CAAGTGAAGAAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTGAAGGGAGCAGGCCATaGAGCCCCTTCCGAATCATT +
Preference number: 4 (lower is better)
Translates to: QVKKPQNSTVICLSLKITEGSRP*SPFRII
Trigger: AATGATTCGGAAGGGGCTTCATGGCCTGCTCCCTTC...AGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTTCTTCACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR TCA 90 bp ATGCAGGATCTCCTGGTCTTCTTTTGTTTGGTAATGAAACTCTTCAAGGTGTGCGGGATCTTCAGAAACTaGAGAAGGCATTTCGAAGGG +
Preference number: 4 (lower is better)
Translates to: MQDLLVFFCLVMKLFKVCGIFRN*RRHFEG
Trigger: CCCTTCGAAATGCCTTCTTCAGTTTCTGAAGATCCC...GCACACCTTGAAGAGTTTCATTACCAAACAAAAGAAGACCAGGAGATCCTGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
CDS-3UTR TCA 90 bp GTGGAAGCTTTAAGTTTGATTCTGATGTTAGCACTTCAAGTGAAGAAGCCACAGGCTCTTCCGTATTTCTaGAGACTCATGGCAGCATCG +
Preference number: 4 (lower is better)
Translates to: VEALSLILMLALQVKKPQALPYF*RLMAAS
Trigger: CGATGCTGCCATGAGTCTTCAGAAATACGGAAGAGC...CTGTGGCTTCTTCACTTGAAGTGCTAACATCAGAATCAAACTTAAAGCTTCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR TCA 90 bp TTCTCACCATTATATCAAGAGCCCCAGATAGTGTTTTCAACTTTCCAACATTGCGCGCACAAATCCGCATaGGCCTTCCCGTGTTACATA +
Preference number: 4 (lower is better)
Translates to: FSPLYQEPQIVFSTFQHCAHKSA*AFPCYI
Trigger: TATGTAACACGGGAAGGCTCATGCGGATTTGTGCGC...GCAATGTTGGAAAGTTGAAAACACTATCTGGGGCTCTTGATATAATGGTGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR TCA 90 bp AGGTGGACGATAACGTTGATTCTTTCCAGAAGAGTCGCGGTTTTATTTGCAGTTCTGTCGAGCAGACACTaGATCCACATCGCAGTATTT +
Preference number: 4 (lower is better)
Translates to: RWTITLILSRRVAVLFAVLSSRH*IHIAVF
Trigger: AAATACTGCGATGTGGATTCAGTGTCTGCTCGACAG...AACTGCAAATAAAACCGCGACTCTTCTGGAAAGAATCAACGTTATCGTCCACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR TCA 90 bp CAAGTGAAGAAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTGTTGCAGCTCGATACTaGCAAAGGGGCTGTCGAGCA +
Preference number: 4 (lower is better)
Translates to: QVKKPQNSTVICLSLKITVAARY*QRGCRA
Trigger: TGCTCGACAGCCCCTTTGTCAGTATCGAGCTGCAAC...AGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTTCTTCACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR TCA 90 bp AAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCTGTGTTTCGTTGCAGCTCGATACTaGCAAAGGGGCTGTCGAGCA +
Preference number: 4 (lower is better)
Translates to: KPQNSTVICLSLKITLCFVAARY*QRGCRA
Trigger: TGCTCGACAGCCCCTTTGTCAGTATCGAGCTGCAAC...GAAACACAGAGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
CDS-3UTR TCA 90 bp ACCATTATATCAAGAGCCCCAGATAGTGTTTTCAACTTTCCAACATTGCTATTCGTTGCAGCTCGATACTaGCAAAGGGGCTGTCGAGCA +
Preference number: 4 (lower is better)
Translates to: TIISRAPDSVFNFPTLLFVAARY*QRGCRA
Trigger: TGCTCGACAGCCCCTTTGTCAGTATCGAGCTGCAAC...GAATAGCAATGTTGGAAAGTTGAAAACACTATCTGGGGCTCTTGATATAATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR TCA 90 bp CCCAAACAGCTGGGTGTATGTCTCGTGTTCCCAATGACCTTAGCGCTTTCAAATTGTGCTTGTTGGTTTTaGGAATTGTGTCATCTTCGA +
Preference number: 4 (lower is better)
Translates to: PKQLGVCLVFPMTLALSNCACWF*ELCHLR
Trigger: TCGAAGATGACACAATTCTCAAAACCAACAAGCACA...ATTTGAAAGCGCTAAGGTCATTGGGAACACGAGACATACACCCAGCTGTTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR TCA 90 bp CCCCAGATAGTGTTTTCAACTTTCCAACATTGCTATTCTGACTGGTCATCTGAAATGCCCCACTATGTATaGGGGTTCAAGAGGCTCACT +
Preference number: 4 (lower is better)
Translates to: PQIVFSTFQHCYSDWSSEMPHYV*GFKRLT
Trigger: AGTGAGCCTCTTGAACCCTCATACATAGTGGGGCAT...TTCAGATGACCAGTCAGAATAGCAATGTTGGAAAGTTGAAAACACTATCTGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp TCAGTTCTCACCATTATATCAAGAGCCCCAGATAGTGTTTTCAACTTTCCAACATTCAAGGCGTGCAAATaGTGTTCGAGGAGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: SVLTIISRAPDSVFNFPTFKACK*CSRRGR
Trigger: TCTGCCCCTCCTCGAACAGCATTTGCACGCCTTGAA...TGTTGGAAAGTTGAAAACACTATCTGGGGCTCTTGATATAATGGTGAGAACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp TTGATTCTTTCCAGAAGAGTCGCGGTTTTATTTGCAGTTGCTCTCAAAAGCTGGTTTCTCTTCAAGGCGTaGAAATGCTGTTCGAGGAGG +
Preference number: 4 (lower is better)
Translates to: LILSRRVAVLFAVALKSWFLFKA*KCCSRR
Trigger: CCTCCTCGAACAGCATTTGCACGCCTTGAAGAGAAA...CCAGCTTTTGAGAGCAACTGCAAATAAAACCGCGACTCTTCTGGAAAGAATCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp AGTTTCTTCACAAAGAGTAGTGAGGTCATAGAGCTTCACTATATCGCTGCCACTTGCTCACGTGCGACTTaGTGTAGGGAATTTTCAGGA +
Preference number: 4 (lower is better)
Translates to: SFFTKSSEVIELHYIAATCSRAT*CREFSG
Trigger: TCCTGAAAATTCCCTACAGCAAGTCGCACGTGAGCA...AGTGGCAGCGATATAGTGAAGCTCTATGACCTCACTACTCTTTGTGAAGAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481600.5
CDS-3UTR GCA 90 bp AAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCTGTGTTTCTGCGGTGTACTGCCATaGTCACGTGCGACTTGCTGT +
Preference number: 4 (lower is better)
Translates to: KPQNSTVICLSLKITLCFCGVLP*SRATCC
Trigger: ACAGCAAGTCGCACGTGAGCATGGCAGTACACCGCA...GAAACACAGAGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
CDS-3UTR GCA 90 bp CAAGTGAAGAAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTTGCGGTGTACTGCCATaGTCACGTGCGACTTGCTGT +
Preference number: 4 (lower is better)
Translates to: QVKKPQNSTVICLSLKITCGVLP*SRATCC
Trigger: ACAGCAAGTCGCACGTGAGCATGGCAGTACACCGCA...AGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTTCTTCACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR GCA 90 bp ATAACGTTGATTCTTTCCAGAAGAGTCGCGGTTTTATTTGCAGTTGCTCTCAAATCCTATGCGGTGTACTaGCATGCTCACGTGCGACTT +
Preference number: 4 (lower is better)
Translates to: ITLILSRRVAVLFAVALKSYAVY*HAHVRL
Trigger: AAGTCGCACGTGAGCATGGCAGTACACCGCATAGGA...TTTGAGAGCAACTGCAAATAAAACCGCGACTCTTCTGGAAAGAATCAACGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp AGCGGCGTCACCACTCTTAGGCTGGCCAAATTCTTCTATAAGCTCCTTCTGGATTCTTCATCATCATGTTaGAAGCAACCTTGTACAAGA +
Preference number: 4 (lower is better)
Translates to: SGVTTLRLAKFFYKLLLDSSSSC*KQPCTR
Trigger: TCTTGTACAAGGTTGCTTGCAACATGATGATGAAGA...ATCCAGAAGGAGCTTATAGAAGAATTTGGCCAGCCTAAGAGTGGTGACGCCGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp GTGGAAGCTTTAAGTTTGATTCTGATGTTAGCACTTCAAGTGAAGAAGCCACAGAAAAACAAGGCCATCTaGTTCTCTAGCCCCTCGGGA +
Preference number: 4 (lower is better)
Translates to: VEALSLILMLALQVKKPQKNKAI*FSSPSG
Trigger: TCCCGAGGGGCTAGAGAAGCAGATGGCCTTGTTTTT...CTGTGGCTTCTTCACTTGAAGTGCTAACATCAGAATCAAACTTAAAGCTTCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR GCA 90 bp AACAAAGCACCGAATGAACAAACCGGCTCCGTGTTGAAGGCACTGACAGCGTGTAAACTCTTCAAGGTGTaGTGCTCTATTATTTGCATT +
Preference number: 4 (lower is better)
Translates to: NKAPNEQTGSVLKALTACKLFKV*CSIICI
Trigger: AATGCAAATAATAGAGCAGCACACCTTGAAGAGTTT...ACACGCTGTCAGTGCCTTCAACACGGAGCCGGTTTGTTCATTCGGTGCTTTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
CDS-3UTR GCA 90 bp GTTGATTCTTTCCAGAAGAGTCGCGGTTTTATTTGCAGTTGCTCTCAAAAGCTGACAGCTTTGCGGCCTTaGTGTAATGAAGATCTGCCA +
Preference number: 4 (lower is better)
Translates to: VDSFQKSRGFICSCSQKLTALRP*CNEDLP
Trigger: TGGCAGATCTTCATTACAGCAAGGCCGCAAAGCTGT...CAGCTTTTGAGAGCAACTGCAAATAAAACCGCGACTCTTCTGGAAAGAATCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp AGCGGCGTCACCACTCTTAGGCTGGCCAAATTCTTCTATAAGCTCCTTCTGGATTCAACTTTCCAACATTaGTATTCTGACTGGTCATCT +
Preference number: 4 (lower is better)
Translates to: SGVTTLRLAKFFYKLLLDSTFQH*YSDWSS
Trigger: AGATGACCAGTCAGAATAGCAATGTTGGAAAGTTGA...ATCCAGAAGGAGCTTATAGAAGAATTTGGCCAGCCTAAGAGTGGTGACGCCGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp GCGGCGTCACCACTCTTAGGCTGGCCAAATTCTTCTATAAGCTCCTTCTGGATATCAACTTTCCAACATTaGTATTCTGACTGGTCATCT +
Preference number: 4 (lower is better)
Translates to: AASPLLGWPNSSISSFWISTFQH*YSDWSS
Trigger: AGATGACCAGTCAGAATAGCAATGTTGGAAAGTTGA...TATCCAGAAGGAGCTTATAGAAGAATTTGGCCAGCCTAAGAGTGGTGACGCCGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp CCGTGTTACATAATAAAAGGGCGGCATTGGTGGCATCCTCAATTGATTCAAAGTCTGGATAAGCTGGAATaGGTGCTCAGTTCTCACCAT +
Preference number: 4 (lower is better)
Translates to: PCYIIKGRHWWHPQLIQSLDKLE*VLSSHH
Trigger: ATGGTGAGAACTGAGCACGCATTCCAGCTTATCCAG...ACTTTGAATCAATTGAGGATGCCACCAATGCCGCCCTTTTATTATGTAACACGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp AAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCTGTGTTTCAGAAGCATCAGCAGCTaGAGCGGCGTCACCACTCTT +
Preference number: 4 (lower is better)
Translates to: KPQNSTVICLSLKITLCFRSISS*SGVTTL
Trigger: AAGAGTGGTGACGCCGCTGCAGCTGCTGATGCTTCT...GAAACACAGAGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
CDS-3UTR GCA 90 bp CAAGTGAAGAAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTAGAAGCATCAGCAGCTaGAGCGGCGTCACCACTCTT +
Preference number: 4 (lower is better)
Translates to: QVKKPQNSTVICLSLKITRSISS*SGVTTL
Trigger: AAGAGTGGTGACGCCGCTGCAGCTGCTGATGCTTCT...AGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTTCTTCACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR CCA 90 bp AGCATCTTTCAGCAGCTGAAACAGCTTTGCGGCCTTGCTGTAATGAAGATCTGCGAGCCGACCAACATATaGATATCTTCAAATGTCCAT +
Preference number: 4 (lower is better)
Translates to: SIFQQLKQLCGLAVMKICEPTNI*ISSNVH
Trigger: ATGGACATTTGAAGATATCCATATGTTGGTCGGCTC...GCAGATCTTCATTACAGCAAGGCCGCAAAGCTGTTTCAGCTGCTGAAAGATGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CCA 90 bp CATCATCATGTTGCAAGCAACCTTGTACAAGAGAATGGCTACCGGCATTGTGAACAAATATGGGCATGTTaGAGCCGACCAACATATGGA +
Preference number: 4 (lower is better)
Translates to: HHHVASNLVQENGYRHCEQIWAC*SRPTYG
Trigger: TCCATATGTTGGTCGGCTCCAACATGCCCATATTTG...TTCACAATGCCGGTAGCCATTCTCTTGTACAAGGTTGCTTGCAACATGATGATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481600.5
ENST00000530795.1
CDS-3UTR CCA 90 bp TTTTCCACAACTGTTGCTCGGCAGCAGACACAGATTTGCTCACTAGTCTCTCACACACATCACAAGCTCTaGCACATTGCATATCAAGTT +
Preference number: 4 (lower is better)
Translates to: FSTTVARQQTQICSLVSHTHHKL*HIAYQV
Trigger: AACTTGATATGCAATGTGCCAGAGCTTGTGATGTGT...GTGAGAGACTAGTGAGCAAATCTGTGTCTGCTGCCGAGCAACAGTTGTGGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CCA 90 bp CACCCGGTGTTGTTTCCTAAGGTGTTCATCACCAACCTGATTCCTCAGACAGCTTACCGGCATTGTGAATaGATTTTGGTATTTGTCTTC +
Preference number: 4 (lower is better)
Translates to: HPVLFPKVFITNLIPQTAYRHCE*ILVFVF
Trigger: GAAGACAAATACCAAAATCCATTCACAATGCCGGTA...AGCTGTCTGAGGAATCAGGTTGGTGATGAACACCTTAGGAAACAACACCGGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CCA 90 bp AATCCCAAACAGCTGGGTGTATGTCTCGTGTTCCCAATGACCTTAGCGCTTTCAATTTCTGAAGACTCATaGCAGCATCGGACAAAACAT +
Preference number: 4 (lower is better)
Translates to: NPKQLGVCLVFPMTLALSISEDS*QHRTKH
Trigger: ATGTTTTGTCCGATGCTGCCATGAGTCTTCAGAAAT...TGAAAGCGCTAAGGTCATTGGGAACACGAGACATACACCCAGCTGTTTGGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CCA 90 bp TATGTTGCCAAGAGCCAGGGATCATTCCAGATTGACTGGAATAATTGCCCTTCTTGGGCCAGCATTAGTTaGATATCACCACAAAGTGTC +
Preference number: 4 (lower is better)
Translates to: YVAKSQGSFQIDWNNCPSWASIS*ISPQSV
Trigger: GACACTTTGTGGTGATATCCAACTAATGCTGGCCCA...AGAAGGGCAATTATTCCAGTCAATCTGGAATGATCCCTGGCTCTTGGCAACATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
CDS-3UTR CCA 90 bp CAAGTGAAGAAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTGACAGCTGTGGTACATaGAGGCCAGCCTGTGATGGA +
Preference number: 4 (lower is better)
Translates to: QVKKPQNSTVICLSLKITDSCGT*RPACDG
Trigger: TCCATCACAGGCTGGCCTCCATGTACCACAGCTGTC...AGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTTCTTCACTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR CCA 90 bp AAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCTGTGTTTCTTCCTCAGACAGCTGTaGTACATGGAGGCCAGCCTG +
Preference number: 4 (lower is better)
Translates to: KPQNSTVICLSLKITLCFFLRQL*YMEASL
Trigger: CAGGCTGGCCTCCATGTACCACAGCTGTCTGAGGAA...GAAACACAGAGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
CDS-3UTR CCA 90 bp GTGGAAGCTTTAAGTTTGATTCTGATGTTAGCACTTCAAGTGAAGAAGCCACAGAGCTGGCCCAGCAGGTaGACGATAACGTTGATTCTT +
Preference number: 4 (lower is better)
Translates to: VEALSLILMLALQVKKPQSWPSR*TITLIL
Trigger: AAGAATCAACGTTATCGTCCACCTGCTGGGCCAGCT...CTGTGGCTTCTTCACTTGAAGTGCTAACATCAGAATCAAACTTAAAGCTTCCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR CCA 90 bp TTCTCACCATTATATCAAGAGCCCCAGATAGTGTTTTCAACTTTCCAACATTGCGCTCACTTCCCTGACTaGAAGCACTGGGATCTTCAG +
Preference number: 4 (lower is better)
Translates to: FSPLYQEPQIVFSTFQHCAHFPD*KHWDLQ
Trigger: CTGAAGATCCCAGTGCTTCCAGTCAGGGAAGTGAGC...GCAATGTTGGAAAGTTGAAAACACTATCTGGGGCTCTTGATATAATGGTGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CCA 90 bp TCAAATATACTGAGGAGTTTCATCACTTCTTCTCGATTGAGACTAGGAGAAGCATCAGGTTTTGTTCTTTaGGGGCTGAGGCCACATGCC +
Preference number: 4 (lower is better)
Translates to: SNILRSFITSSRLRLGEASGFVL*GLRPHA
Trigger: GGCATGTGGCCTCAGCCCCCAAAGAACAAAACCTGA...TGCTTCTCCTAGTCTCAATCGAGAAGAAGTGATGAAACTCCTCAGTATATTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR TCA 90 bp ATACTGAGGAGTTTCATCACTTCTTCTCGATTGAGACTAGGAGAAGCATCAGCAATCATTTGTCTGATCTaGACTGGACGATTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: ILRSFITSSRLRLGEASAIICLI*TGRFLL
Trigger: CAGCAGGAATCGTCCAGTTCAGATCAGACAAATGAT...TGCTGATGCTTCTCCTAGTCTCAATCGAGAAGAAGTGATGAAACTCCTCAGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR TCA 90 bp TGTATCGTAATGCTCTTCCGTATTTCTGAAGACTCATGGCAGCATCGGACAAAATCCGAATCATTTGTCTaGTCTGAACTGGACGATTCC +
Preference number: 4 (lower is better)
Translates to: CIVMLFRISEDSWQHRTKSESFV*SELDDS
Trigger: GGAATCGTCCAGTTCAGATCAGACAAATGATTCGGA...TTTTGTCCGATGCTGCCATGAGTCTTCAGAAATACGGAAGAGCATTACGATACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
CDS-3UTR TCA 90 bp GTGGAAGCTTTAAGTTTGATTCTGATGTTAGCACTTCAAGTGAAGAAGCCACAGGGGATCTTCAGAAACTaGAGAAGGCATTTCGAAGGG +
Preference number: 4 (lower is better)
Translates to: VEALSLILMLALQVKKPQGIFRN*RRHFEG
Trigger: CCCTTCGAAATGCCTTCTTCAGTTTCTGAAGATCCC...CTGTGGCTTCTTCACTTGAAGTGCTAACATCAGAATCAAACTTAAAGCTTCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR TCA 90 bp GTGGAAGCTTTAAGTTTGATTCTGATGTTAGCACTTCAAGTGAAGAAGCCACAGCTCGGGACCCCCTCTTaGGGATTCATCTTCATATTT +
Preference number: 4 (lower is better)
Translates to: VEALSLILMLALQVKKPQLGTPS*GFIFIF
Trigger: AAATATGAAGATGAATCCTCAAGAGGGGGTCCCGAG...CTGTGGCTTCTTCACTTGAAGTGCTAACATCAGAATCAAACTTAAAGCTTCCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR TCA 90 bp CAAGTGAAGAAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCAACTGGACTCTCTGTaGAGGCTATGCAGGATCTCC +
Preference number: 4 (lower is better)
Translates to: QVKKPQNSTVICLSLKITQLDSL*RLCRIS
Trigger: GGAGATCCTGCATAGCCTTCACAGAGAGTCCAGTTG...AGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTTCTTCACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR TCA 90 bp AAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCTGTGTTTCCAACTGGACTCTCTGTaGAGGCTATGCAGGATCTCC +
Preference number: 4 (lower is better)
Translates to: KPQNSTVICLSLKITLCFQLDSL*RLCRIS
Trigger: GGAGATCCTGCATAGCCTTCACAGAGAGTCCAGTTG...GAAACACAGAGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
CDS-3UTR TCA 90 bp CAAGTGAAGAAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTGCGCACAAATCCGCATaGGCCTTCCCGTGTTACATA +
Preference number: 4 (lower is better)
Translates to: QVKKPQNSTVICLSLKITAHKSA*AFPCYI
Trigger: TATGTAACACGGGAAGGCTCATGCGGATTTGTGCGC...AGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTTCTTCACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR TCA 90 bp ATAACGTTGATTCTTTCCAGAAGAGTCGCGGTTTTATTTGCAGTTGCTCTCAAACAATTCCCAGTTCACTaGATCCCAAACAGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: ITLILSRRVAVLFAVALKQFPVH*IPNSWV
Trigger: CACCCAGCTGTTTGGGATTCAGTGAACTGGGAATTG...TTTGAGAGCAACTGCAAATAAAACCGCGACTCTTCTGGAAAGAATCAACGTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR TCA 90 bp CAAGTGAAGAAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTGCATCTTTCAGCAGCTaGAACAGCTTTGCGGCCTTG +
Preference number: 4 (lower is better)
Translates to: QVKKPQNSTVICLSLKITASFSS*NSFAAL
Trigger: CAAGGCCGCAAAGCTGTTTCAGCTGCTGAAAGATGC...AGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTTCTTCACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR TCA 90 bp GTGGAAGCTTTAAGTTTGATTCTGATGTTAGCACTTCAAGTGAAGAAGCCACAGAAACAAAGCACCGAATaGACAAACCGGCTCCGTGTT +
Preference number: 4 (lower is better)
Translates to: VEALSLILMLALQVKKPQKQSTE*TNRLRV
Trigger: AACACGGAGCCGGTTTGTTCATTCGGTGCTTTGTTT...CTGTGGCTTCTTCACTTGAAGTGCTAACATCAGAATCAAACTTAAAGCTTCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR GCA 90 bp AAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCTGTGTTTCTCCTATGCGGTGTACTaGCATGCTCACGTGCGACTT +
Preference number: 4 (lower is better)
Translates to: KPQNSTVICLSLKITLCFSYAVY*HAHVRL
Trigger: AAGTCGCACGTGAGCATGGCAGTACACCGCATAGGA...GAAACACAGAGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
CDS-3UTR GCA 90 bp TTCAGTTTCTTCACAAAGAGTAGTGAGGTCATAGAGCTTCACTATATCGCTGCCCAAGCTCTGGCACATTaGATATCAAGTTGTCCAACC +
Preference number: 4 (lower is better)
Translates to: FSFFTKSSEVIELHYIAAQALAH*ISSCPT
Trigger: GGTTGGACAACTTGATATGCAATGTGCCAGAGCTTG...GGCAGCGATATAGTGAAGCTCTATGACCTCACTACTCTTTGTGAAGAAACTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481600.5
ENST00000530795.1
CDS-3UTR GCA 90 bp GGGCGGCATTGGTGGCATCCTCAATTGATTCAAAGTTGTGAATTCCCTTTTCAAATGGCAAACTGGAAATaGACAACTGGGTCTGATTTG +
Preference number: 4 (lower is better)
Translates to: GRHWWHPQLIQSCEFPFQMANWK*TTGSDL
Trigger: CAAATCAGACCCAGTTGTGCATTTCCAGTTTGCCAT...TTGAAAAGGGAATTCACAACTTTGAATCAATTGAGGATGCCACCAATGCCGCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp AAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCTGTGTTTCAGTGCTGGGGTCAGCTaGTGGAAGGTCGCTTTCTTT +
Preference number: 4 (lower is better)
Translates to: KPQNSTVICLSLKITLCFSAGVS*WKVAFF
Trigger: AAAGAAAGCGACCTTCCAGCAGCTGACCCCAGCACT...GAAACACAGAGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
CDS-3UTR GCA 90 bp CAAGTGAAGAAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTTTAACGGGATTGGAGTaGTGGGGTCAGCTGCTGGAA +
Preference number: 4 (lower is better)
Translates to: QVKKPQNSTVICLSLKITLTGLE*WGQLLE
Trigger: TTCCAGCAGCTGACCCCAGCACTCCAATCCCGTTAA...AGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTTCTTCACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR GCA 90 bp ATAACGTTGATTCTTTCCAGAAGAGTCGCGGTTTTATTTGCAGTTGCTCTCAAAAAAAACAAGGCCATCTaGTTCTCTAGCCCCTCGGGA +
Preference number: 4 (lower is better)
Translates to: ITLILSRRVAVLFAVALKKNKAI*FSSPSG
Trigger: TCCCGAGGGGCTAGAGAAGCAGATGGCCTTGTTTTT...TTTGAGAGCAACTGCAAATAAAACCGCGACTCTTCTGGAAAGAATCAACGTTAT
43% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp TTGATTCTTTCCAGAAGAGTCGCGGTTTTATTTGCAGTTGCTCTCAAAAGCTGGATTGACTGGAATAATTaGCCTTCTGAAGGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: LILSRRVAVLFAVALKSWIDWNN*PSEGSP
Trigger: TGGGCTCCCTTCAGAAGGGCAATTATTCCAGTCAAT...CCAGCTTTTGAGAGCAACTGCAAATAAAACCGCGACTCTTCTGGAAAGAATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp CCCAAACAGCTGGGTGTATGTCTCGTGTTCCCAATGACCTTAGCGCTTTCAAATAGTTTCATTTTATGTTaGCAAGAGCCAGGGATCATT +
Preference number: 4 (lower is better)
Translates to: PKQLGVCLVFPMTLALSNSFILC*QEPGII
Trigger: AATGATCCCTGGCTCTTGGCAACATAAAATGAAACT...ATTTGAAAGCGCTAAGGTCATTGGGAACACGAGACATACACCCAGCTGTTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp CATCATCATGTTGCAAGCAACCTTGTACAAGAGAATGGCTACCGGCATTGTGAATGTAGACAAATCAGTTaGCCATGCAAATCCTTGGCA +
Preference number: 4 (lower is better)
Translates to: HHHVASNLVQENGYRHCECRQIS*PCKSLA
Trigger: TGCCAAGGATTTGCATGGGCAACTGATTTGTCTACA...TTCACAATGCCGGTAGCCATTCTCTTGTACAAGGTTGCTTGCAACATGATGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481600.5
CDS-3UTR GCA 90 bp GTGGAAGCTTTAAGTTTGATTCTGATGTTAGCACTTCAAGTGAAGAAGCCACAGACAGCTTTGCGGCCTTaGTGTAATGAAGATCTGCCA +
Preference number: 4 (lower is better)
Translates to: VEALSLILMLALQVKKPQTALRP*CNEDLP
Trigger: TGGCAGATCTTCATTACAGCAAGGCCGCAAAGCTGT...CTGTGGCTTCTTCACTTGAAGTGCTAACATCAGAATCAAACTTAAAGCTTCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR GCA 90 bp GTGGAAGCTTTAAGTTTGATTCTGATGTTAGCACTTCAAGTGAAGAAGCCACAGCAGCTGAAACAGCTTTaGGGCCTTGCTGTAATGAAG +
Preference number: 4 (lower is better)
Translates to: VEALSLILMLALQVKKPQQLKQL*GLAVMK
Trigger: CTTCATTACAGCAAGGCCGCAAAGCTGTTTCAGCTG...CTGTGGCTTCTTCACTTGAAGTGCTAACATCAGAATCAAACTTAAAGCTTCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR GCA 90 bp CCCGTGTTACATAATAAAAGGGCGGCATTGGTGGCATCCTCAATTGATTCAAAGAGTCGCGGTTTTATTTaGAGTTGCTCTCAAAAGCTG +
Preference number: 4 (lower is better)
Translates to: PVLHNKRAALVASSIDSKSRGFI*SCSQKL
Trigger: CAGCTTTTGAGAGCAACTGCAAATAAAACCGCGACT...CTTTGAATCAATTGAGGATGCCACCAATGCCGCCCTTTTATTATGTAACACGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp GTAAATGTGCTTGTTGGTTTTGAGAATTGTGTCATCTTCGATGTTATTGCTTGTCGCACTTCCGGTCTCTaGCAGGAAGAAGTAGCTGTG +
Preference number: 4 (lower is better)
Translates to: VNVLVGFENCVIFDVIACRTSGL*QEEVAV
Trigger: CACAGCTACTTCTTCCTGGCAGAGACCGGAAGTGCG...ACAAGCAATAACATCGAAGATGACACAATTCTCAAAACCAACAAGCACATTTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CCA 90 bp AAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCTGTGTTTCCTGCTGGCCCTAGTTTaGCACTCTCTCGTAACCAGT +
Preference number: 4 (lower is better)
Translates to: KPQNSTVICLSLKITLCFLLALV*HSLVTS
Trigger: ACTGGTTACGAGAGAGTGCCAAACTAGGGCCAGCAG...GAAACACAGAGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
CDS-3UTR CCA 90 bp GTACAAGAGAATGGCTACCGGCATTGTGAATGGATTTTGGTATTTGTCTTCAGTCCTGACTGGAAGCACTaGGATCTTCAGAAACTGAAG +
Preference number: 4 (lower is better)
Translates to: VQENGYRHCEWILVFVFSPDWKH*DLQKLK
Trigger: CTTCAGTTTCTGAAGATCCCAGTGCTTCCAGTCAGG...ACTGAAGACAAATACCAAAATCCATTCACAATGCCGGTAGCCATTCTCTTGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481600.5
ENST00000530795.1
CDS-3UTR CCA 90 bp TTGATTCTTTCCAGAAGAGTCGCGGTTTTATTTGCAGTTGCTCTCAAAAGCTGGCAAATATGGGCATGTTaGAGCCGACCAACATATGGA +
Preference number: 4 (lower is better)
Translates to: LILSRRVAVLFAVALKSWQIWAC*SRPTYG
Trigger: TCCATATGTTGGTCGGCTCCAACATGCCCATATTTG...CCAGCTTTTGAGAGCAACTGCAAATAAAACCGCGACTCTTCTGGAAAGAATCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CCA 90 bp TGGAATGCGTGCTCAGTTCTCACCATTATATCAAGAGCCCCAGATAGTGTTTTCCTGATGGATCAGAGCTaGTGCTATAGGATCCATTTT +
Preference number: 4 (lower is better)
Translates to: WNACSVLTIISRAPDSVFLMDQS*CYRIHF
Trigger: AAAATGGATCCTATAGCACCAGCTCTGATCCATCAG...GAAAACACTATCTGGGGCTCTTGATATAATGGTGAGAACTGAGCACGCATTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CCA 90 bp CCCAAACAGCTGGGTGTATGTCTCGTGTTCCCAATGACCTTAGCGCTTTCAAATTCATTCCAGATTGACTaGAATAATTGCCCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: PKQLGVCLVFPMTLALSNSFQID*NNCPSE
Trigger: TTCAGAAGGGCAATTATTCCAGTCAATCTGGAATGA...ATTTGAAAGCGCTAAGGTCATTGGGAACACGAGACATACACCCAGCTGTTTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CCA 90 bp ATGCAGGATCTCCTGGTCTTCTTTTGTTTGGTAATGAAACTCTTCAAGGTGTGCTGGGCCAGCATTAGTTaGATATCACCACAAAGTGTC +
Preference number: 4 (lower is better)
Translates to: MQDLLVFFCLVMKLFKVCWASIS*ISPQSV
Trigger: GACACTTTGTGGTGATATCCAACTAATGCTGGCCCA...GCACACCTTGAAGAGTTTCATTACCAAACAAAAGAAGACCAGGAGATCCTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
CDS-3UTR CCA 90 bp CAAGTGAAGAAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCCAGCCTGTGATGGATaGTTGCAGCTCGATACTGAC +
Preference number: 4 (lower is better)
Translates to: QVKKPQNSTVICLSLKITPACDG*LQLDTD
Trigger: GTCAGTATCGAGCTGCAACCATCCATCACAGGCTGG...AGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTTCTTCACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR CCA 90 bp AAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCTGTGTTTCCCAGCCTGTGATGGATaGTTGCAGCTCGATACTGAC +
Preference number: 4 (lower is better)
Translates to: KPQNSTVICLSLKITLCFPACDG*LQLDTD
Trigger: GTCAGTATCGAGCTGCAACCATCCATCACAGGCTGG...GAAACACAGAGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
CDS-3UTR CCA 90 bp GTGGAAGCTTTAAGTTTGATTCTGATGTTAGCACTTCAAGTGAAGAAGCCACAGTCCTTCTGGATAAGCTaGAATGCGTGCTCAGTTCTC +
Preference number: 4 (lower is better)
Translates to: VEALSLILMLALQVKKPQSFWIS*NACSVL
Trigger: GAGAACTGAGCACGCATTCCAGCTTATCCAGAAGGA...CTGTGGCTTCTTCACTTGAAGTGCTAACATCAGAATCAAACTTAAAGCTTCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR CCA 90 bp TGTATCGTAATGCTCTTCCGTATTTCTGAAGACTCATGGCAGCATCGGACAAAATCTATAAGCTCCTTCTaGATAAGCTGGAATGCGTGC +
Preference number: 4 (lower is better)
Translates to: CIVMLFRISEDSWQHRTKSISSF*ISWNAC
Trigger: GCACGCATTCCAGCTTATCCAGAAGGAGCTTATAGA...TTTTGTCCGATGCTGCCATGAGTCTTCAGAAATACGGAAGAGCATTACGATACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
CDS-3UTR CCA 90 bp CATTCCAGATTGACTGGAATAATTGCCCTTCTGAAGGGAGCCCATTTTGTCCAATCACCACTCTTAGGCTaGCCAAATTCTTCTATAAGC +
Preference number: 4 (lower is better)
Translates to: HSRLTGIIALLKGAHFVQSPLLG*PNSSIS
Trigger: GCTTATAGAAGAATTTGGCCAGCCTAAGAGTGGTGA...TTGGACAAAATGGGCTCCCTTCAGAAGGGCAATTATTCCAGTCAATCTGGAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
CDS-3UTR CCA 90 bp CAAGTGAAGAAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTGCTCACTTCCCTGACTaGAAGCACTGGGATCTTCAG +
Preference number: 4 (lower is better)
Translates to: QVKKPQNSTVICLSLKITAHFPD*KHWDLQ
Trigger: CTGAAGATCCCAGTGCTTCCAGTCAGGGAAGTGAGC...AGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTTCTTCACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356792.9
CDS-3UTR CCA 90 bp ACCATTATATCAAGAGCCCCAGATAGTGTTTTCAACTTTCCAACATTGCTATTCGCTCACTTCCCTGACTaGAAGCACTGGGATCTTCAG +
Preference number: 4 (lower is better)
Translates to: TIISRAPDSVFNFPTLLFAHFPD*KHWDLQ
Trigger: CTGAAGATCCCAGTGCTTCCAGTCAGGGAAGTGAGC...GAATAGCAATGTTGGAAAGTTGAAAACACTATCTGGGGCTCTTGATATAATGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
3UTR CAA 72 bp GGTAATGAAACTCTTCAAGGTGTGCTGCTCTATTATTaGCATTCTGGGCCAGCATTAGTTGGATATCACCAC +
Preference number: 4 (lower is better)
Translates to: GNETLQGVLLYY*HSGPALVGYHH
Trigger: GTGGTGATATCCAACTAATGCTGGCCCAGAATGCAAATAATAGAGCAGCACACCTTGAAGAGTTTCATTACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
CDS-3UTR TCA 90 bp GTGGAAGCTTTAAGTTTGATTCTGATGTTAGCACTTCAAGTGAAGAAGCCACAGTCCGAATCATTTGTCTaGTCTGAACTGGACGATTCC +
Preference number: 4 (lower is better)
Translates to: VEALSLILMLALQVKKPQSESFV*SELDDS
Trigger: GGAATCGTCCAGTTCAGATCAGACAAATGATTCGGA...CTGTGGCTTCTTCACTTGAAGTGCTAACATCAGAATCAAACTTAAAGCTTCCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR TCA 90 bp ATAACGTTGATTCTTTCCAGAAGAGTCGCGGTTTTATTTGCAGTTGCTCTCAAAGGGATCTTCAGAAACTaGAGAAGGCATTTCGAAGGG +
Preference number: 4 (lower is better)
Translates to: ITLILSRRVAVLFAVALKGIFRN*RRHFEG
Trigger: CCCTTCGAAATGCCTTCTTCAGTTTCTGAAGATCCC...TTTGAGAGCAACTGCAAATAAAACCGCGACTCTTCTGGAAAGAATCAACGTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR TCA 90 bp ATGCAGGATCTCCTGGTCTTCTTTTGTTTGGTAATGAAACTCTTCAAGGTGTGCTGGCTACCGGCATTGTaGATGGATTTTGGTATTTGT +
Preference number: 4 (lower is better)
Translates to: MQDLLVFFCLVMKLFKVCWLPAL*MDFGIC
Trigger: ACAAATACCAAAATCCATTCACAATGCCGGTAGCCA...GCACACCTTGAAGAGTTTCATTACCAAACAAAAGAAGACCAGGAGATCCTGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
CDS-3UTR TCA 90 bp TTCACAAAGAGTAGTGAGGTCATAGAGCTTCACTATATCGCTGCCACTTGCTTTTGGCTACCGGCATTGTaGATGGATTTTGGTATTTGT +
Preference number: 4 (lower is better)
Translates to: FTKSSEVIELHYIAATCFWLPAL*MDFGIC
Trigger: ACAAATACCAAAATCCATTCACAATGCCGGTAGCCA...AAAGCAAGTGGCAGCGATATAGTGAAGCTCTATGACCTCACTACTCTTTGTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481600.5
ENST00000530795.1
CDS-3UTR TCA 90 bp TCAAATATACTGAGGAGTTTCATCACTTCTTCTCGATTGAGACTAGGAGAAGCACTCGGGACCCCCTCTTaGGGATTCATCTTCATATTT +
Preference number: 4 (lower is better)
Translates to: SNILRSFITSSRLRLGEALGTPS*GFIFIF
Trigger: AAATATGAAGATGAATCCTCAAGAGGGGGTCCCGAG...TGCTTCTCCTAGTCTCAATCGAGAAGAAGTGATGAAACTCCTCAGTATATTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR TCA 90 bp AGGAGAAGAAATGACAACCGAGACTCAAATATACTGAGGAGTTTCATCACTTCTCTCGGGACCCCCTCTTaGGGATTCATCTTCATATTT +
Preference number: 4 (lower is better)
Translates to: RRRNDNRDSNILRSFITSLGTPS*GFIFIF
Trigger: AAATATGAAGATGAATCCTCAAGAGGGGGTCCCGAG...AGAAGTGATGAAACTCCTCAGTATATTTGAGTCTCGGTTGTCATTTCTTCTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR TCA 90 bp CAAGTGAAGAAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTGCTCTTCCGTATTTCTaGAGACTCATGGCAGCATCG +
Preference number: 4 (lower is better)
Translates to: QVKKPQNSTVICLSLKITALPYF*RLMAAS
Trigger: CGATGCTGCCATGAGTCTTCAGAAATACGGAAGAGC...AGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTTCTTCACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR TCA 90 bp AAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCTGTGTTTCCAATTCCCAGTTCACTaGATCCCAAACAGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: KPQNSTVICLSLKITLCFQFPVH*IPNSWV
Trigger: CACCCAGCTGTTTGGGATTCAGTGAACTGGGAATTG...GAAACACAGAGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
CDS-3UTR TCA 90 bp CAAGTGAAGAAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCAATTCCCAGTTCACTaGATCCCAAACAGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: QVKKPQNSTVICLSLKITQFPVH*IPNSWV
Trigger: CACCCAGCTGTTTGGGATTCAGTGAACTGGGAATTG...AGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTTCTTCACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR TCA 90 bp AAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCTGTGTTTCTGTTCATCACCAACCTaGTTCCTCAGACAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: KPQNSTVICLSLKITLCFCSSPT*FLRQLW
Trigger: CCACAGCTGTCTGAGGAATCAGGTTGGTGATGAACA...GAAACACAGAGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
CDS-3UTR TCA 90 bp CAAGTGAAGAAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTTGTTCATCACCAACCTaGTTCCTCAGACAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: QVKKPQNSTVICLSLKITCSSPT*FLRQLW
Trigger: CCACAGCTGTCTGAGGAATCAGGTTGGTGATGAACA...AGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTTCTTCACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR TCA 90 bp AAGCTGGGAGTAAATGTGCTTGTTGGTTTTGAGAATTGTGTCATCTTCGATGTTAAACAAAGCACCGAATaGACAAACCGGCTCCGTGTT +
Preference number: 4 (lower is better)
Translates to: KLGVNVLVGFENCVIFDVKQSTE*TNRLRV
Trigger: AACACGGAGCCGGTTTGTTCATTCGGTGCTTTGTTT...AACATCGAAGATGACACAATTCTCAAAACCAACAAGCACATTTACTCCCAGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000525358.1
CDS-3UTR TCA 90 bp CAAGTGAAGAAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTATGCCCCACTATGTATaGGGGTTCAAGAGGCTCACT +
Preference number: 4 (lower is better)
Translates to: QVKKPQNSTVICLSLKITMPHYV*GFKRLT
Trigger: AGTGAGCCTCTTGAACCCTCATACATAGTGGGGCAT...AGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTTCTTCACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356792.9
CDS-3UTR GCA 90 bp CAAGTGAAGAAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTAGAGAGTCCTTCCTATaGGGTGTACTGCCATGCTCA +
Preference number: 4 (lower is better)
Translates to: QVKKPQNSTVICLSLKITRESFL*GVLPCS
Trigger: TGAGCATGGCAGTACACCGCATAGGAAGGACTCTCT...AGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTTCTTCACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR GCA 90 bp AAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCTGTGTTTCAGAGAGTCCTTCCTATaGGGTGTACTGCCATGCTCA +
Preference number: 4 (lower is better)
Translates to: KPQNSTVICLSLKITLCFRESFL*GVLPCS
Trigger: TGAGCATGGCAGTACACCGCATAGGAAGGACTCTCT...GAAACACAGAGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
CDS-3UTR GCA 90 bp TGGAATGCGTGCTCAGTTCTCACCATTATATCAAGAGCCCCAGATAGTGTTTTCATGGATCAGAGCTGGTaGTATAGGATCCATTTTCAT +
Preference number: 4 (lower is better)
Translates to: WNACSVLTIISRAPDSVFMDQSW*YRIHFH
Trigger: ATGAAAATGGATCCTATAGCACCAGCTCTGATCCAT...GAAAACACTATCTGGGGCTCTTGATATAATGGTGAGAACTGAGCACGCATTCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp CATCATCATGTTGCAAGCAACCTTGTACAAGAGAATGGCTACCGGCATTGTGAAATGGATCAGAGCTGGTaGTATAGGATCCATTTTCAT +
Preference number: 4 (lower is better)
Translates to: HHHVASNLVQENGYRHCEMDQSW*YRIHFH
Trigger: ATGAAAATGGATCCTATAGCACCAGCTCTGATCCAT...TTCACAATGCCGGTAGCCATTCTCTTGTACAAGGTTGCTTGCAACATGATGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481600.5
CDS-3UTR GCA 90 bp AAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCTGTGTTTCAAAAACAAGGCCATCTaGTTCTCTAGCCCCTCGGGA +
Preference number: 4 (lower is better)
Translates to: KPQNSTVICLSLKITLCFKNKAI*FSSPSG
Trigger: TCCCGAGGGGCTAGAGAAGCAGATGGCCTTGTTTTT...GAAACACAGAGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
CDS-3UTR GCA 90 bp GTGGAAGCTTTAAGTTTGATTCTGATGTTAGCACTTCAAGTGAAGAAGCCACAGATTGACTGGAATAATTaGCCTTCTGAAGGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: VEALSLILMLALQVKKPQIDWNN*PSEGSP
Trigger: TGGGCTCCCTTCAGAAGGGCAATTATTCCAGTCAAT...CTGTGGCTTCTTCACTTGAAGTGCTAACATCAGAATCAAACTTAAAGCTTCCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR GCA 90 bp TTGATTCTTTCCAGAAGAGTCGCGGTTTTATTTGCAGTTGCTCTCAAAAGCTGGCGGAAAGCATATTGGTaGAGAGGCAGCAATAAGTAT +
Preference number: 4 (lower is better)
Translates to: LILSRRVAVLFAVALKSWRKAYW*RGSNKY
Trigger: ATACTTATTGCTGCCTCTGCACCAATATGCTTTCCG...CCAGCTTTTGAGAGCAACTGCAAATAAAACCGCGACTCTTCTGGAAAGAATCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp GGGCGGCATTGGTGGCATCCTCAATTGATTCAAAGTTGTGAATTCCCTTTTCAACTCTTCAAGGTGTGCTaGTCTATTATTTGCATTCTG +
Preference number: 4 (lower is better)
Translates to: GRHWWHPQLIQSCEFPFQLFKVC*SIICIL
Trigger: CAGAATGCAAATAATAGAGCAGCACACCTTGAAGAG...TTGAAAAGGGAATTCACAACTTTGAATCAATTGAGGATGCCACCAATGCCGCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp GTGGAAGCTTTAAGTTTGATTCTGATGTTAGCACTTCAAGTGAAGAAGCCACAGCAAATCAGTTGCCCATaGAAATCCTTGGCAACTGGA +
Preference number: 4 (lower is better)
Translates to: VEALSLILMLALQVKKPQQISCP*KSLATG
Trigger: TCCAGTTGCCAAGGATTTGCATGGGCAACTGATTTG...CTGTGGCTTCTTCACTTGAAGTGCTAACATCAGAATCAAACTTAAAGCTTCCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR GCA 90 bp GTGGAAGCTTTAAGTTTGATTCTGATGTTAGCACTTCAAGTGAAGAAGCCACAGTTTTTCCACAACTGTTaGTCGGCAGCAGACACAGAT +
Preference number: 4 (lower is better)
Translates to: VEALSLILMLALQVKKPQFFHNC*SAADTD
Trigger: ATCTGTGTCTGCTGCCGAGCAACAGTTGTGGAAAAA...CTGTGGCTTCTTCACTTGAAGTGCTAACATCAGAATCAAACTTAAAGCTTCCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR GCA 90 bp TCAAATATACTGAGGAGTTTCATCACTTCTTCTCGATTGAGACTAGGAGAAGCAGCTGTAATGAAGATCTaGCAGCACCCGGTGTTGTTT +
Preference number: 4 (lower is better)
Translates to: SNILRSFITSSRLRLGEAAVMKI*QHPVLF
Trigger: AAACAACACCGGGTGCTGGCAGATCTTCATTACAGC...TGCTTCTCCTAGTCTCAATCGAGAAGAAGTGATGAAACTCCTCAGTATATTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp TCAGTTCTCACCATTATATCAAGAGCCCCAGATAGTGTTTTCAACTTTCCAACACAGCTGAAACAGCTTTaGGGCCTTGCTGTAATGAAG +
Preference number: 4 (lower is better)
Translates to: SVLTIISRAPDSVFNFPTQLKQL*GLAVMK
Trigger: CTTCATTACAGCAAGGCCGCAAAGCTGTTTCAGCTG...TGTTGGAAAGTTGAAAACACTATCTGGGGCTCTTGATATAATGGTGAGAACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp GTTGATTCTTTCCAGAAGAGTCGCGGTTTTATTTGCAGTTGCTCTCAAAAGCTGGCAGGTCAATGCCAATaGAGTTGTCATATGATGATG +
Preference number: 4 (lower is better)
Translates to: VDSFQKSRGFICSCSQKLAGQCQ*SCHMMM
Trigger: CATCATCATATGACAACTGCATTGGCATTGACCTGC...CAGCTTTTGAGAGCAACTGCAAATAAAACCGCGACTCTTCTGGAAAGAATCAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525358.1
CDS-3UTR CCA 90 bp AAGCTGGGAGTAAATGTGCTTGTTGGTTTTGAGAATTGTGTCATCTTCGATGTTCCTGACTGGAAGCACTaGGATCTTCAGAAACTGAAG +
Preference number: 4 (lower is better)
Translates to: KLGVNVLVGFENCVIFDVPDWKH*DLQKLK
Trigger: CTTCAGTTTCTGAAGATCCCAGTGCTTCCAGTCAGG...AACATCGAAGATGACACAATTCTCAAAACCAACAAGCACATTTACTCCCAGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CCA 90 bp GTGGAAGCTTTAAGTTTGATTCTGATGTTAGCACTTCAAGTGAAGAAGCCACAGTGTGTCATGGCAAACTaGAAATGCACAACTGGGTCT +
Preference number: 4 (lower is better)
Translates to: VEALSLILMLALQVKKPQCVMAN*KCTTGS
Trigger: AGACCCAGTTGTGCATTTCCAGTTTGCCATGACACA...CTGTGGCTTCTTCACTTGAAGTGCTAACATCAGAATCAAACTTAAAGCTTCCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR CCA 90 bp GTGGAAGCTTTAAGTTTGATTCTGATGTTAGCACTTCAAGTGAAGAAGCCACAGTGGGCCAGCATTAGTTaGATATCACCACAAAGTGTC +
Preference number: 4 (lower is better)
Translates to: VEALSLILMLALQVKKPQWASIS*ISPQSV
Trigger: GACACTTTGTGGTGATATCCAACTAATGCTGGCCCA...CTGTGGCTTCTTCACTTGAAGTGCTAACATCAGAATCAAACTTAAAGCTTCCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR CCA 90 bp CCCCAGATAGTGTTTTCAACTTTCCAACATTGCTATTCTGACTGGTCATCTGAACAAATCCTTGGCAACTaGACTCTCTGTGAAGGCTAT +
Preference number: 4 (lower is better)
Translates to: PQIVFSTFQHCYSDWSSEQILGN*TLCEGY
Trigger: ATAGCCTTCACAGAGAGTCCAGTTGCCAAGGATTTG...TTCAGATGACCAGTCAGAATAGCAATGTTGGAAAGTTGAAAACACTATCTGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
CDS-3UTR CCA 90 bp GTGGAAGCTTTAAGTTTGATTCTGATGTTAGCACTTCAAGTGAAGAAGCCACAGAAAGGGCGGCATTGGTaGCATCCTCAATTGATTCAA +
Preference number: 4 (lower is better)
Translates to: VEALSLILMLALQVKKPQKGRHW*HPQLIQ
Trigger: TTGAATCAATTGAGGATGCCACCAATGCCGCCCTTT...CTGTGGCTTCTTCACTTGAAGTGCTAACATCAGAATCAAACTTAAAGCTTCCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR CCA 90 bp GTGGAAGCTTTAAGTTTGATTCTGATGTTAGCACTTCAAGTGAAGAAGCCACAGTCTATAAGCTCCTTCTaGATAAGCTGGAATGCGTGC +
Preference number: 4 (lower is better)
Translates to: VEALSLILMLALQVKKPQSISSF*ISWNAC
Trigger: GCACGCATTCCAGCTTATCCAGAAGGAGCTTATAGA...CTGTGGCTTCTTCACTTGAAGTGCTAACATCAGAATCAAACTTAAAGCTTCCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR CCA 90 bp AGTTTCTTCACAAAGAGTAGTGAGGTCATAGAGCTTCACTATATCGCTGCCACTTCACCACTCTTAGGCTaGCCAAATTCTTCTATAAGC +
Preference number: 4 (lower is better)
Translates to: SFFTKSSEVIELHYIAATSPLLG*PNSSIS
Trigger: GCTTATAGAAGAATTTGGCCAGCCTAAGAGTGGTGA...AGTGGCAGCGATATAGTGAAGCTCTATGACCTCACTACTCTTTGTGAAGAAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481600.5
CDS-3UTR CCA 90 bp AAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCTGTGTTTCAGCTGGCCCAGCAGGTaGACGATAACGTTGATTCTT +
Preference number: 4 (lower is better)
Translates to: KPQNSTVICLSLKITLCFSWPSR*TITLIL
Trigger: AAGAATCAACGTTATCGTCCACCTGCTGGGCCAGCT...GAAACACAGAGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
CDS-3UTR TCA 90 bp GTGGAAGCTTTAAGTTTGATTCTGATGTTAGCACTTCAAGTGAAGAAGCCACAGGAAAGAATTGCCTTTTaGTACCAGTGCTCTTTGCTC +
Preference number: 4 (lower is better)
Translates to: VEALSLILMLALQVKKPQERIAF*YQCSLL
Trigger: GAGCAAAGAGCACTGGTATCAAAAGGCAATTCTTTC...CTGTGGCTTCTTCACTTGAAGTGCTAACATCAGAATCAAACTTAAAGCTTCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR TCA 90 bp AGGAGAAGAAATGACAACCGAGACTCAAATATACTGAGGAGTTTCATCACTTCTATCATTTGTCTGATCTaGACTGGACGATTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: RRRNDNRDSNILRSFITSIICLI*TGRFLL
Trigger: CAGCAGGAATCGTCCAGTTCAGATCAGACAAATGAT...AGAAGTGATGAAACTCCTCAGTATATTTGAGTCTCGGTTGTCATTTCTTCTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR TCA 90 bp AAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCTGTGTTTCGGGATCTTCAGAAACTaGAGAAGGCATTTCGAAGGG +
Preference number: 4 (lower is better)
Translates to: KPQNSTVICLSLKITLCFGIFRN*RRHFEG
Trigger: CCCTTCGAAATGCCTTCTTCAGTTTCTGAAGATCCC...GAAACACAGAGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
CDS-3UTR TCA 90 bp GTGGAAGCTTTAAGTTTGATTCTGATGTTAGCACTTCAAGTGAAGAAGCCACAGTGGCTACCGGCATTGTaGATGGATTTTGGTATTTGT +
Preference number: 4 (lower is better)
Translates to: VEALSLILMLALQVKKPQWLPAL*MDFGIC
Trigger: ACAAATACCAAAATCCATTCACAATGCCGGTAGCCA...CTGTGGCTTCTTCACTTGAAGTGCTAACATCAGAATCAAACTTAAAGCTTCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR TCA 90 bp GTTGATTCTTTCCAGAAGAGTCGCGGTTTTATTTGCAGTTGCTCTCAAAAGCTGAGCAGTTTAATGGACTaGAGGAGAAGAAATGACAAC +
Preference number: 4 (lower is better)
Translates to: VDSFQKSRGFICSCSQKLSSLMD*RRRNDN
Trigger: GTTGTCATTTCTTCTCCTTCAGTCCATTAAACTGCT...CAGCTTTTGAGAGCAACTGCAAATAAAACCGCGACTCTTCTGGAAAGAATCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
ENST00000525358.1
CDS-3UTR TCA 90 bp AAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCTGTGTTTCAAACAAAGCACCGAATaGACAAACCGGCTCCGTGTT +
Preference number: 4 (lower is better)
Translates to: KPQNSTVICLSLKITLCFKQSTE*TNRLRV
Trigger: AACACGGAGCCGGTTTGTTCATTCGGTGCTTTGTTT...GAAACACAGAGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
CDS-3UTR TCA 90 bp TATTTTGATTCTTCTTCATCATCATGTTGCAAGCAACCTTGTACAAGAGAATGGATGCCCCACTATGTATaGGGGTTCAAGAGGCTCACT +
Preference number: 4 (lower is better)
Translates to: YFDSSSSSCCKQPCTREWMPHYV*GFKRLT
Trigger: AGTGAGCCTCTTGAACCCTCATACATAGTGGGGCAT...CCATTCTCTTGTACAAGGTTGCTTGCAACATGATGATGAAGAAGAATCAAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000481600.5
ENST00000530795.1
CDS-3UTR GCA 90 bp AAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCTGTGTTTCTTTCTCTTCAAGGCGTaGAAATGCTGTTCGAGGAGG +
Preference number: 4 (lower is better)
Translates to: KPQNSTVICLSLKITLCFFLFKA*KCCSRR
Trigger: CCTCCTCGAACAGCATTTGCACGCCTTGAAGAGAAA...GAAACACAGAGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
CDS-3UTR GCA 90 bp AAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCTGTGTTTCTGCTCACGTGCGACTTaGTGTAGGGAATTTTCAGGA +
Preference number: 4 (lower is better)
Translates to: KPQNSTVICLSLKITLCFCSRAT*CREFSG
Trigger: TCCTGAAAATTCCCTACAGCAAGTCGCACGTGAGCA...GAAACACAGAGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
CDS-3UTR GCA 90 bp TTCATCATCATGTTGCAAGCAACCTTGTACAAGAGAATGGCTACCGGCATTGTGTCTTCATCATCATGTTaGAAGCAACCTTGTACAAGA +
Preference number: 4 (lower is better)
Translates to: FIIMLQATLYKRMATGIVSSSSC*KQPCTR
Trigger: TCTTGTACAAGGTTGCTTGCAACATGATGATGAAGA...CACAATGCCGGTAGCCATTCTCTTGTACAAGGTTGCTTGCAACATGATGATGAA
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481600.5
ENST00000530795.1
CDS-3UTR GCA 90 bp GTGGAAGCTTTAAGTTTGATTCTGATGTTAGCACTTCAAGTGAAGAAGCCACAGATGGCAAACTGGAAATaGACAACTGGGTCTGATTTG +
Preference number: 4 (lower is better)
Translates to: VEALSLILMLALQVKKPQMANWK*TTGSDL
Trigger: CAAATCAGACCCAGTTGTGCATTTCCAGTTTGCCAT...CTGTGGCTTCTTCACTTGAAGTGCTAACATCAGAATCAAACTTAAAGCTTCCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR GCA 90 bp GGGCGGCATTGGTGGCATCCTCAATTGATTCAAAGTTGTGAATTCCCTTTTCAAAGTTTCATTTTATGTTaGCAAGAGCCAGGGATCATT +
Preference number: 4 (lower is better)
Translates to: GRHWWHPQLIQSCEFPFQSFILC*QEPGII
Trigger: AATGATCCCTGGCTCTTGGCAACATAAAATGAAACT...TTGAAAAGGGAATTCACAACTTTGAATCAATTGAGGATGCCACCAATGCCGCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp AGGAGAAGAAATGACAACCGAGACTCAAATATACTGAGGAGTTTCATCACTTCTCAGCAGACACAGATTTaGTCACTAGTCTCTCACTCT +
Preference number: 4 (lower is better)
Translates to: RRRNDNRDSNILRSFITSQQTQI*SLVSHS
Trigger: AGAGTGAGAGACTAGTGAGCAAATCTGTGTCTGCTG...AGAAGTGATGAAACTCCTCAGTATATTTGAGTCTCGGTTGTCATTTCTTCTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp AGGAGAAGAAATGACAACCGAGACTCAAATATACTGAGGAGTTTCATCACTTCTTTTTTCCACAACTGTTaGTCGGCAGCAGACACAGAT +
Preference number: 4 (lower is better)
Translates to: RRRNDNRDSNILRSFITSFFHNC*SAADTD
Trigger: ATCTGTGTCTGCTGCCGAGCAACAGTTGTGGAAAAA...AGAAGTGATGAAACTCCTCAGTATATTTGAGTCTCGGTTGTCATTTCTTCTCCT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp CAAGTGAAGAAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCCTGTGATGGATGGTTaGAGCTCGATACTGACAAAG +
Preference number: 4 (lower is better)
Translates to: QVKKPQNSTVICLSLKITPVMDG*SSILTK
Trigger: CTTTGTCAGTATCGAGCTGCAACCATCCATCACAGG...AGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTTCTTCACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR GCA 90 bp CAAGTGAAGAAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTGCTGTAATGAAGATCTaGCAGCACCCGGTGTTGTTT +
Preference number: 4 (lower is better)
Translates to: QVKKPQNSTVICLSLKITAVMKI*QHPVLF
Trigger: AAACAACACCGGGTGCTGGCAGATCTTCATTACAGC...AGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTTCTTCACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR GCA 90 bp AAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCTGTGTTTCACAGCTTTGCGGCCTTaGTGTAATGAAGATCTGCCA +
Preference number: 4 (lower is better)
Translates to: KPQNSTVICLSLKITLCFTALRP*CNEDLP
Trigger: TGGCAGATCTTCATTACAGCAAGGCCGCAAAGCTGT...GAAACACAGAGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
CDS-3UTR GCA 90 bp CAAGAGCCCCAGATAGTGTTTTCAACTTTCCAACATTGCTATTCTGACTGGTCAATAAGCTGGAATGCGTaGTCAGTTCTCACCATTATA +
Preference number: 4 (lower is better)
Translates to: QEPQIVFSTFQHCYSDWSISWNA*SVLTII
Trigger: TATAATGGTGAGAACTGAGCACGCATTCCAGCTTAT...TGACCAGTCAGAATAGCAATGTTGGAAAGTTGAAAACACTATCTGGGGCTCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp AAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCTGTGTTTCCTGGATAAGCTGGAATaGGTGCTCAGTTCTCACCAT +
Preference number: 4 (lower is better)
Translates to: KPQNSTVICLSLKITLCFLDKLE*VLSSHH
Trigger: ATGGTGAGAACTGAGCACGCATTCCAGCTTATCCAG...GAAACACAGAGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
CDS-3UTR GCA 90 bp TTGATTCTTTCCAGAAGAGTCGCGGTTTTATTTGCAGTTGCTCTCAAAAGCTGGCATCTTCGATGTTATTaGTTTGGCCTAACAAACTGC +
Preference number: 4 (lower is better)
Translates to: LILSRRVAVLFAVALKSWHLRCY*FGLTNC
Trigger: GCAGTTTGTTAGGCCAAAGCAATAACATCGAAGATG...CCAGCTTTTGAGAGCAACTGCAAATAAAACCGCGACTCTTCTGGAAAGAATCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525358.1
CDS-3UTR CCA 90 bp AAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCTGTGTTTCTCTCTCGTAACCAGTTaGCAGGTGGGAGTTTCAAGT +
Preference number: 4 (lower is better)
Translates to: KPQNSTVICLSLKITLCFSLVTS*QVGVSS
Trigger: ACTTGAAACTCCCACCTGCCAACTGGTTACGAGAGA...GAAACACAGAGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
CDS-3UTR CCA 90 bp CAAGTGAAGAAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTTCTCTCGTAACCAGTTaGCAGGTGGGAGTTTCAAGT +
Preference number: 4 (lower is better)
Translates to: QVKKPQNSTVICLSLKITSLVTS*QVGVSS
Trigger: ACTTGAAACTCCCACCTGCCAACTGGTTACGAGAGA...AGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTTCTTCACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR CCA 90 bp CAAGTGAAGAAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCCTGACTGGAAGCACTaGGATCTTCAGAAACTGAAG +
Preference number: 4 (lower is better)
Translates to: QVKKPQNSTVICLSLKITPDWKH*DLQKLK
Trigger: CTTCAGTTTCTGAAGATCCCAGTGCTTCCAGTCAGG...AGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTTCTTCACTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR CCA 90 bp AAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCTGTGTTTCCCTGACTGGAAGCACTaGGATCTTCAGAAACTGAAG +
Preference number: 4 (lower is better)
Translates to: KPQNSTVICLSLKITLCFPDWKH*DLQKLK
Trigger: CTTCAGTTTCTGAAGATCCCAGTGCTTCCAGTCAGG...GAAACACAGAGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
CDS-3UTR CCA 90 bp AGGAGAAGAAATGACAACCGAGACTCAAATATACTGAGGAGTTTCATCACTTCTCGCTCTTCTGTGTCATaGCAAACTGGAAATGCACAA +
Preference number: 4 (lower is better)
Translates to: RRRNDNRDSNILRSFITSRSSVS*QTGNAQ
Trigger: TTGTGCATTTCCAGTTTGCCATGACACAGAAGAGCG...AGAAGTGATGAAACTCCTCAGTATATTTGAGTCTCGGTTGTCATTTCTTCTCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CCA 90 bp GTGGAAGCTTTAAGTTTGATTCTGATGTTAGCACTTCAAGTGAAGAAGCCACAGATAAAAGGGCGGCATTaGTGGCATCCTCAATTGATT +
Preference number: 4 (lower is better)
Translates to: VEALSLILMLALQVKKPQIKGRH*WHPQLI
Trigger: AATCAATTGAGGATGCCACCAATGCCGCCCTTTTAT...CTGTGGCTTCTTCACTTGAAGTGCTAACATCAGAATCAAACTTAAAGCTTCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR CCA 90 bp TGGAATGCGTGCTCAGTTCTCACCATTATATCAAGAGCCCCAGATAGTGTTTTCCATTGCTATTCTGACTaGTCATCTGAAATTCAGCAA +
Preference number: 4 (lower is better)
Translates to: WNACSVLTIISRAPDSVFHCYSD*SSEIQQ
Trigger: TTGCTGAATTTCAGATGACCAGTCAGAATAGCAATG...GAAAACACTATCTGGGGCTCTTGATATAATGGTGAGAACTGAGCACGCATTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR TCA 90 bp AAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCTGTGTTTCATCATTTGTCTGATCTaGACTGGACGATTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: KPQNSTVICLSLKITLCFIICLI*TGRFLL
Trigger: CAGCAGGAATCGTCCAGTTCAGATCAGACAAATGAT...GAAACACAGAGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
CDS-3UTR TCA 90 bp CAAGTGAAGAAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTTCCGAATCATTTGTCTaGTCTGAACTGGACGATTCC +
Preference number: 4 (lower is better)
Translates to: QVKKPQNSTVICLSLKITSESFV*SELDDS
Trigger: GGAATCGTCCAGTTCAGATCAGACAAATGATTCGGA...AGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTTCTTCACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR TCA 90 bp CAAGTGAAGAAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTTCATTTTTAAGACCCTaGCTGGAAGCACTGGGATCT +
Preference number: 4 (lower is better)
Translates to: QVKKPQNSTVICLSLKITSFLRP*LEALGS
Trigger: AGATCCCAGTGCTTCCAGTCAGGGTCTTAAAAATGA...AGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTTCTTCACTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000337623.7
CDS-3UTR TCA 90 bp GTGGAAGCTTTAAGTTTGATTCTGATGTTAGCACTTCAAGTGAAGAAGCCACAGCAACTAACAGAGAGTTaGCTTTCTAAGTCTGTAGAC +
Preference number: 4 (lower is better)
Translates to: VEALSLILMLALQVKKPQQLTES*LSKSVD
Trigger: GTCTACAGACTTAGAAAGTCAACTCTCTGTTAGTTG...CTGTGGCTTCTTCACTTGAAGTGCTAACATCAGAATCAAACTTAAAGCTTCCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR TCA 90 bp TTCAGTTTCTTCACAAAGAGTAGTGAGGTCATAGAGCTTCACTATATCGCTGCCGAGACTCAAATATACTaGGGAGTTTCATCACTTCTT +
Preference number: 4 (lower is better)
Translates to: FSFFTKSSEVIELHYIAAETQIY*GVSSLL
Trigger: AAGAAGTGATGAAACTCCTCAGTATATTTGAGTCTC...GGCAGCGATATAGTGAAGCTCTATGACCTCACTACTCTTTGTGAAGAAACTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481600.5
CDS-3UTR GCA 90 bp CAAGTGAAGAAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCAAGCTCTGGCACATTaGATATCAAGTTGTCCAACC +
Preference number: 4 (lower is better)
Translates to: QVKKPQNSTVICLSLKITQALAH*ISSCPT
Trigger: GGTTGGACAACTTGATATGCAATGTGCCAGAGCTTG...AGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTTCTTCACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR GCA 90 bp GTGGAAGCTTTAAGTTTGATTCTGATGTTAGCACTTCAAGTGAAGAAGCCACAGATGGATCAGAGCTGGTaGTATAGGATCCATTTTCAT +
Preference number: 4 (lower is better)
Translates to: VEALSLILMLALQVKKPQMDQSW*YRIHFH
Trigger: ATGAAAATGGATCCTATAGCACCAGCTCTGATCCAT...CTGTGGCTTCTTCACTTGAAGTGCTAACATCAGAATCAAACTTAAAGCTTCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR GCA 90 bp TCAGTTCTCACCATTATATCAAGAGCCCCAGATAGTGTTTTCAACTTTCCAACAATGGCAAACTGGAAATaGACAACTGGGTCTGATTTG +
Preference number: 4 (lower is better)
Translates to: SVLTIISRAPDSVFNFPTMANWK*TTGSDL
Trigger: CAAATCAGACCCAGTTGTGCATTTCCAGTTTGCCAT...TGTTGGAAAGTTGAAAACACTATCTGGGGCTCTTGATATAATGGTGAGAACTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp AAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCTGTGTTTCATTGACTGGAATAATTaGCCTTCTGAAGGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: KPQNSTVICLSLKITLCFIDWNN*PSEGSP
Trigger: TGGGCTCCCTTCAGAAGGGCAATTATTCCAGTCAAT...GAAACACAGAGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
CDS-3UTR GCA 90 bp GTGGAAGCTTTAAGTTTGATTCTGATGTTAGCACTTCAAGTGAAGAAGCCACAGCTCTTCAAGGTGTGCTaGTCTATTATTTGCATTCTG +
Preference number: 4 (lower is better)
Translates to: VEALSLILMLALQVKKPQLFKVC*SIICIL
Trigger: CAGAATGCAAATAATAGAGCAGCACACCTTGAAGAG...CTGTGGCTTCTTCACTTGAAGTGCTAACATCAGAATCAAACTTAAAGCTTCCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR GCA 90 bp ACCATTATATCAAGAGCCCCAGATAGTGTTTTCAACTTTCCAACATTGCTATTCCAAATCAGTTGCCCATaGAAATCCTTGGCAACTGGA +
Preference number: 4 (lower is better)
Translates to: TIISRAPDSVFNFPTLLFQISCP*KSLATG
Trigger: TCCAGTTGCCAAGGATTTGCATGGGCAACTGATTTG...GAATAGCAATGTTGGAAAGTTGAAAACACTATCTGGGGCTCTTGATATAATGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
CDS-3UTR GCA 90 bp AAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCTGTGTTTCCAGCAGACACAGATTTaGTCACTAGTCTCTCACTCT +
Preference number: 4 (lower is better)
Translates to: KPQNSTVICLSLKITLCFQQTQI*SLVSHS
Trigger: AGAGTGAGAGACTAGTGAGCAAATCTGTGTCTGCTG...GAAACACAGAGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
CDS-3UTR GCA 90 bp CAAGTGAAGAAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCAGCAGACACAGATTTaGTCACTAGTCTCTCACTCT +
Preference number: 4 (lower is better)
Translates to: QVKKPQNSTVICLSLKITQQTQI*SLVSHS
Trigger: AGAGTGAGAGACTAGTGAGCAAATCTGTGTCTGCTG...AGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTTCTTCACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR GCA 90 bp CAAGTGAAGAAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTTTTTTCCACAACTGTTaGTCGGCAGCAGACACAGAT +
Preference number: 4 (lower is better)
Translates to: QVKKPQNSTVICLSLKITFFHNC*SAADTD
Trigger: ATCTGTGTCTGCTGCCGAGCAACAGTTGTGGAAAAA...AGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTTCTTCACTTG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR CCA 90 bp CAAGTGAAGAAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTTTGTCTGATCTGAACTaGACGATTCCTGCTGTTCTG +
Preference number: 4 (lower is better)
Translates to: QVKKPQNSTVICLSLKITLSDLN*TIPAVL
Trigger: CAGAACAGCAGGAATCGTCCAGTTCAGATCAGACAA...AGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTTCTTCACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR CCA 90 bp CCATTATATCAAGAGCCCCAGATAGTGTTTTCAACTTTCCAACATTGCTATTCTTTGTCTGATCTGAACTaGACGATTCCTGCTGTTCTG +
Preference number: 4 (lower is better)
Translates to: PLYQEPQIVFSTFQHCYSLSDLN*TIPAVL
Trigger: CAGAACAGCAGGAATCGTCCAGTTCAGATCAGACAA...AGAATAGCAATGTTGGAAAGTTGAAAACACTATCTGGGGCTCTTGATATAATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CCA 90 bp AAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCTGTGTTTCCAAATATGGGCATGTTaGAGCCGACCAACATATGGA +
Preference number: 4 (lower is better)
Translates to: KPQNSTVICLSLKITLCFQIWAC*SRPTYG
Trigger: TCCATATGTTGGTCGGCTCCAACATGCCCATATTTG...GAAACACAGAGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
CDS-3UTR CCA 90 bp ATGTTGCAAGCAACCTTGTACAAGAGAATGGCTACCGGCATTGTGAATGGATTTTACCGGCATTGTGAATaGATTTTGGTATTTGTCTTC +
Preference number: 4 (lower is better)
Translates to: MLQATLYKRMATGIVNGFYRHCE*ILVFVF
Trigger: GAAGACAAATACCAAAATCCATTCACAATGCCGGTA...AAATCCATTCACAATGCCGGTAGCCATTCTCTTGTACAAGGTTGCTTGCAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481600.5
ENST00000530795.1
CDS-3UTR CCA 90 bp AAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCTGTGTTTCCGCTCTTCTGTGTCATaGCAAACTGGAAATGCACAA +
Preference number: 4 (lower is better)
Translates to: KPQNSTVICLSLKITLCFRSSVS*QTGNAQ
Trigger: TTGTGCATTTCCAGTTTGCCATGACACAGAAGAGCG...GAAACACAGAGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
CDS-3UTR CCA 90 bp ATGCAGGATCTCCTGGTCTTCTTTTGTTTGGTAATGAAACTCTTCAAGGTGTGCTCATTCCAGATTGACTaGAATAATTGCCCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: MQDLLVFFCLVMKLFKVCSFQID*NNCPSE
Trigger: TTCAGAAGGGCAATTATTCCAGTCAATCTGGAATGA...GCACACCTTGAAGAGTTTCATTACCAAACAAAAGAAGACCAGGAGATCCTGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
CDS-3UTR CCA 90 bp CCCCAGATAGTGTTTTCAACTTTCCAACATTGCTATTCTGACTGGTCATCTGAAATTTCTGAAGACTCATaGCAGCATCGGACAAAACAT +
Preference number: 4 (lower is better)
Translates to: PQIVFSTFQHCYSDWSSEISEDS*QHRTKH
Trigger: ATGTTTTGTCCGATGCTGCCATGAGTCTTCAGAAAT...TTCAGATGACCAGTCAGAATAGCAATGTTGGAAAGTTGAAAACACTATCTGGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CCA 90 bp CAAGTGAAGAAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCTTCGGAAAGCATATTaGTGCAGAGGCAGCAATAAG +
Preference number: 4 (lower is better)
Translates to: QVKKPQNSTVICLSLKITLRKAY*CRGSNK
Trigger: CTTATTGCTGCCTCTGCACCAATATGCTTTCCGAAG...AGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTTCTTCACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR CCA 90 bp AAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCTGTGTTTCTGGGCCAGCATTAGTTaGATATCACCACAAAGTGTC +
Preference number: 4 (lower is better)
Translates to: KPQNSTVICLSLKITLCFWASIS*ISPQSV
Trigger: GACACTTTGTGGTGATATCCAACTAATGCTGGCCCA...GAAACACAGAGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
CDS-3UTR CCA 90 bp AAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCTGTGTTTCCAAATCCTTGGCAACTaGACTCTCTGTGAAGGCTAT +
Preference number: 4 (lower is better)
Translates to: KPQNSTVICLSLKITLCFQILGN*TLCEGY
Trigger: ATAGCCTTCACAGAGAGTCCAGTTGCCAAGGATTTG...GAAACACAGAGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
CDS-3UTR CCA 90 bp CAAGTGAAGAAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCAAATCCTTGGCAACTaGACTCTCTGTGAAGGCTAT +
Preference number: 4 (lower is better)
Translates to: QVKKPQNSTVICLSLKITQILGN*TLCEGY
Trigger: ATAGCCTTCACAGAGAGTCCAGTTGCCAAGGATTTG...AGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTTCTTCACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR CCA 90 bp ATGCAGGATCTCCTGGTCTTCTTTTGTTTGGTAATGAAACTCTTCAAGGTGTGCCATTGCTATTCTGACTaGTCATCTGAAATTCAGCAA +
Preference number: 4 (lower is better)
Translates to: MQDLLVFFCLVMKLFKVCHCYSD*SSEIQQ
Trigger: TTGCTGAATTTCAGATGACCAGTCAGAATAGCAATG...GCACACCTTGAAGAGTTTCATTACCAAACAAAAGAAGACCAGGAGATCCTGCAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
3UTR CAA 72 bp AGAATGGCTACCGGCATTGTGAATGGATTTTGGTATTaGTCTTCAGTTTCTTCACAAAGAGTAGTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: RMATGIVNGFWY*SSVSSQRVVRS
Trigger: TGACCTCACTACTCTTTGTGAAGAAACTGAAGACAAATACCAAAATCCATTCACAATGCCGGTAGCCATTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481600.5
ENST00000530795.1
CDS-3UTR TCA 90 bp AAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCTGTGTTTCTGCCATGCCAAAGCTTaGAAATGGCTTGCTTTTCTT +
Preference number: 4 (lower is better)
Translates to: KPQNSTVICLSLKITLCFCHAKA*KWLAFL
Trigger: AAGAAAAGCAAGCCATTTTCAAGCTTTGGCATGGCA...GAAACACAGAGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
CDS-3UTR TCA 90 bp GTGGAAGCTTTAAGTTTGATTCTGATGTTAGCACTTCAAGTGAAGAAGCCACAGCACATCATTTCCCACTaGATCAATAAAGTCATATGC +
Preference number: 4 (lower is better)
Translates to: VEALSLILMLALQVKKPQHIISH*INKVIC
Trigger: GCATATGACTTTATTGATTCAGTGGGAAATGATGTG...CTGTGGCTTCTTCACTTGAAGTGCTAACATCAGAATCAAACTTAAAGCTTCCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR TCA 90 bp AAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCTGTGTTTCGAAAGAATTGCCTTTTaGTACCAGTGCTCTTTGCTC +
Preference number: 4 (lower is better)
Translates to: KPQNSTVICLSLKITLCFERIAF*YQCSLL
Trigger: GAGCAAAGAGCACTGGTATCAAAAGGCAATTCTTTC...GAAACACAGAGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
CDS-3UTR TCA 90 bp GTGGAAGCTTTAAGTTTGATTCTGATGTTAGCACTTCAAGTGAAGAAGCCACAGCGGCTCCATCACCATTaGTACTGTAATATAAAAACT +
Preference number: 4 (lower is better)
Translates to: VEALSLILMLALQVKKPQRLHHH*YCNIKT
Trigger: AGTTTTTATATTACAGTATCAATGGTGATGGAGCCG...CTGTGGCTTCTTCACTTGAAGTGCTAACATCAGAATCAAACTTAAAGCTTCCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR TCA 90 bp AAGCTGGGAGTAAATGTGCTTGTTGGTTTTGAGAATTGTGTCATCTTCGATGTTTGTGCTTGTTGGTTTTaGGAATTGTGTCATCTTCGA +
Preference number: 4 (lower is better)
Translates to: KLGVNVLVGFENCVIFDVCACWF*ELCHLR
Trigger: TCGAAGATGACACAATTCTCAAAACCAACAAGCACA...AACATCGAAGATGACACAATTCTCAAAACCAACAAGCACATTTACTCCCAGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
ENST00000525358.1
CDS-3UTR GCA 90 bp CAAGTGAAGAAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTGGCTCTTCACTTCATTaGCTCCAAGAAATAAAGCTG +
Preference number: 4 (lower is better)
Translates to: QVKKPQNSTVICLSLKITGSSLH*LQEIKL
Trigger: CAGCTTTATTTCTTGGAGGCAATGAAGTGAAGAGCC...AGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTTCTTCACTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR GCA 90 bp AAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCTGTGTTTCGGCTCTTCACTTCATTaGCTCCAAGAAATAAAGCTG +
Preference number: 4 (lower is better)
Translates to: KPQNSTVICLSLKITLCFGSSLH*LQEIKL
Trigger: CAGCTTTATTTCTTGGAGGCAATGAAGTGAAGAGCC...GAAACACAGAGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
CDS-3UTR GCA 90 bp GTGGAAGCTTTAAGTTTGATTCTGATGTTAGCACTTCAAGTGAAGAAGCCACAGTCTTCATCATCATGTTaGAAGCAACCTTGTACAAGA +
Preference number: 4 (lower is better)
Translates to: VEALSLILMLALQVKKPQSSSSC*KQPCTR
Trigger: TCTTGTACAAGGTTGCTTGCAACATGATGATGAAGA...CTGTGGCTTCTTCACTTGAAGTGCTAACATCAGAATCAAACTTAAAGCTTCCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR GCA 90 bp TCAGTTCTCACCATTATATCAAGAGCCCCAGATAGTGTTTTCAACTTTCCAACAATGGATCAGAGCTGGTaGTATAGGATCCATTTTCAT +
Preference number: 4 (lower is better)
Translates to: SVLTIISRAPDSVFNFPTMDQSW*YRIHFH
Trigger: ATGAAAATGGATCCTATAGCACCAGCTCTGATCCAT...TGTTGGAAAGTTGAAAACACTATCTGGGGCTCTTGATATAATGGTGAGAACTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp AAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCTGTGTTTCATGGCAAACTGGAAATaGACAACTGGGTCTGATTTG +
Preference number: 4 (lower is better)
Translates to: KPQNSTVICLSLKITLCFMANWK*TTGSDL
Trigger: CAAATCAGACCCAGTTGTGCATTTCCAGTTTGCCAT...GAAACACAGAGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR GCA 90 bp AAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCTGTGTTTCCGGAAAGCATATTGGTaGAGAGGCAGCAATAAGTAT +
Preference number: 4 (lower is better)
Translates to: KPQNSTVICLSLKITLCFRKAYW*RGSNKY
Trigger: ATACTTATTGCTGCCTCTGCACCAATATGCTTTCCG...GAAACACAGAGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
CDS-3UTR GCA 90 bp CAAGTGAAGAAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCGGAAAGCATATTGGTaGAGAGGCAGCAATAAGTAT +
Preference number: 4 (lower is better)
Translates to: QVKKPQNSTVICLSLKITRKAYW*RGSNKY
Trigger: ATACTTATTGCTGCCTCTGCACCAATATGCTTTCCG...AGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTTCTTCACTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR GCA 90 bp TCAGCTGAAGTTTCATTTTATGTTGCCAAGAGCCAGGGATCATTCCAGATTGACAAACTCTTCAAGGTGTaGTGCTCTATTATTTGCATT +
Preference number: 4 (lower is better)
Translates to: SAEVSFYVAKSQGSFQIDKLFKV*CSIICI
Trigger: AATGCAAATAATAGAGCAGCACACCTTGAAGAGTTT...GTCAATCTGGAATGATCCCTGGCTCTTGGCAACATAAAATGAAACTTCAGCTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
CDS-3UTR GCA 90 bp AAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCTGTGTTTCTGTAGACAAATCAGTTaGCCATGCAAATCCTTGGCA +
Preference number: 4 (lower is better)
Translates to: KPQNSTVICLSLKITLCFCRQIS*PCKSLA
Trigger: TGCCAAGGATTTGCATGGGCAACTGATTTGTCTACA...GAAACACAGAGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
CDS-3UTR GCA 90 bp CAAGTGAAGAAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTTGTAGACAAATCAGTTaGCCATGCAAATCCTTGGCA +
Preference number: 4 (lower is better)
Translates to: QVKKPQNSTVICLSLKITCRQIS*PCKSLA
Trigger: TGCCAAGGATTTGCATGGGCAACTGATTTGTCTACA...AGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTTCTTCACTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR GCA 90 bp GTGGAAGCTTTAAGTTTGATTCTGATGTTAGCACTTCAAGTGAAGAAGCCACAGTCAACTTTCCAACATTaGTATTCTGACTGGTCATCT +
Preference number: 4 (lower is better)
Translates to: VEALSLILMLALQVKKPQSTFQH*YSDWSS
Trigger: AGATGACCAGTCAGAATAGCAATGTTGGAAAGTTGA...CTGTGGCTTCTTCACTTGAAGTGCTAACATCAGAATCAAACTTAAAGCTTCCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR GCA 90 bp AAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCTGTGTTTCAGTCGCGGTTTTATTTaGAGTTGCTCTCAAAAGCTG +
Preference number: 4 (lower is better)
Translates to: KPQNSTVICLSLKITLCFSRGFI*SCSQKL
Trigger: CAGCTTTTGAGAGCAACTGCAAATAAAACCGCGACT...GAAACACAGAGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
CDS-3UTR GCA 90 bp CAAGTGAAGAAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTAGTCGCGGTTTTATTTaGAGTTGCTCTCAAAAGCTG +
Preference number: 4 (lower is better)
Translates to: QVKKPQNSTVICLSLKITSRGFI*SCSQKL
Trigger: CAGCTTTTGAGAGCAACTGCAAATAAAACCGCGACT...AGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTTCTTCACTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR CCA 90 bp GTGGAAGCTTTAAGTTTGATTCTGATGTTAGCACTTCAAGTGAAGAAGCCACAGTACCGGCATTGTGAATaGATTTTGGTATTTGTCTTC +
Preference number: 4 (lower is better)
Translates to: VEALSLILMLALQVKKPQYRHCE*ILVFVF
Trigger: GAAGACAAATACCAAAATCCATTCACAATGCCGGTA...CTGTGGCTTCTTCACTTGAAGTGCTAACATCAGAATCAAACTTAAAGCTTCCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR CCA 90 bp GTGGAAGCTTTAAGTTTGATTCTGATGTTAGCACTTCAAGTGAAGAAGCCACAGTCATTCCAGATTGACTaGAATAATTGCCCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: VEALSLILMLALQVKKPQSFQID*NNCPSE
Trigger: TTCAGAAGGGCAATTATTCCAGTCAATCTGGAATGA...CTGTGGCTTCTTCACTTGAAGTGCTAACATCAGAATCAAACTTAAAGCTTCCAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR CCA 90 bp ACCATTATATCAAGAGCCCCAGATAGTGTTTTCAACTTTCCAACATTGCTATTCATAAAAGGGCGGCATTaGTGGCATCCTCAATTGATT +
Preference number: 4 (lower is better)
Translates to: TIISRAPDSVFNFPTLLFIKGRH*WHPQLI
Trigger: AATCAATTGAGGATGCCACCAATGCCGCCCTTTTAT...GAATAGCAATGTTGGAAAGTTGAAAACACTATCTGGGGCTCTTGATATAATGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CCA 90 bp CAAGTGAAGAAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTTCACCACTCTTAGGCTaGCCAAATTCTTCTATAAGC +
Preference number: 4 (lower is better)
Translates to: QVKKPQNSTVICLSLKITSPLLG*PNSSIS
Trigger: GCTTATAGAAGAATTTGGCCAGCCTAAGAGTGGTGA...AGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTTCTTCACTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR CCA 90 bp AAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCTGTGTTTCTCACCACTCTTAGGCTaGCCAAATTCTTCTATAAGC +
Preference number: 4 (lower is better)
Translates to: KPQNSTVICLSLKITLCFSPLLG*PNSSIS
Trigger: GCTTATAGAAGAATTTGGCCAGCCTAAGAGTGGTGA...GAAACACAGAGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
3UTR CAA 72 bp GTACAAGAGAATGGCTACCGGCATTGTGAATGGATTTaGGTATTTGTCTTCAGTTTCTTCACAAAGAGTAGT +
Preference number: 4 (lower is better)
Translates to: VQENGYRHCEWI*VFVFSFFTKSS
Trigger: ACTACTCTTTGTGAAGAAACTGAAGACAAATACCAAAATCCATTCACAATGCCGGTAGCCATTCTCTTGTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481600.5
ENST00000530795.1
CDS-3UTR TCA 90 bp AAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCTGTGTTTCCAACTAACAGAGAGTTaGCTTTCTAAGTCTGTAGAC +
Preference number: 4 (lower is better)
Translates to: KPQNSTVICLSLKITLCFQLTES*LSKSVD
Trigger: GTCTACAGACTTAGAAAGTCAACTCTCTGTTAGTTG...GAAACACAGAGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
CDS-3UTR TCA 90 bp AAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCTGTGTTTCAGCAGTTTAATGGACTaGAGGAGAAGAAATGACAAC +
Preference number: 4 (lower is better)
Translates to: KPQNSTVICLSLKITLCFSSLMD*RRRNDN
Trigger: GTTGTCATTTCTTCTCCTTCAGTCCATTAAACTGCT...GAAACACAGAGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
CDS-3UTR TCA 90 bp CAAGTGAAGAAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTTGTGCTTGTTGGTTTTaGGAATTGTGTCATCTTCGA +
Preference number: 4 (lower is better)
Translates to: QVKKPQNSTVICLSLKITCACWF*ELCHLR
Trigger: TCGAAGATGACACAATTCTCAAAACCAACAAGCACA...AGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTTCTTCACTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR GCA 90 bp CAAGTGAAGAAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTATGGATCAGAGCTGGTaGTATAGGATCCATTTTCAT +
Preference number: 4 (lower is better)
Translates to: QVKKPQNSTVICLSLKITMDQSW*YRIHFH
Trigger: ATGAAAATGGATCCTATAGCACCAGCTCTGATCCAT...AGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTTCTTCACTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR GCA 90 bp CAAGTGAAGAAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCTCTTCAAGGTGTGCTaGTCTATTATTTGCATTCTG +
Preference number: 4 (lower is better)
Translates to: QVKKPQNSTVICLSLKITLFKVC*SIICIL
Trigger: CAGAATGCAAATAATAGAGCAGCACACCTTGAAGAG...AGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTTCTTCACTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR GCA 90 bp GTTCTCACCATTATATCAAGAGCCCCAGATAGTGTTTTCAACTTTCCAACATTGTTCAAGTCACTAAACTaGAAGATTTCATTAGCAGCC +
Preference number: 4 (lower is better)
Translates to: VLTIISRAPDSVFNFPTLFKSLN*KISLAA
Trigger: GGCTGCTAATGAAATCTTGCAGTTTAGTGACTTGAA...CAATGTTGGAAAGTTGAAAACACTATCTGGGGCTCTTGATATAATGGTGAGAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp TCAAATATACTGAGGAGTTTCATCACTTCTTCTCGATTGAGACTAGGAGAAGCATTCAAGTCACTAAACTaGAAGATTTCATTAGCAGCC +
Preference number: 4 (lower is better)
Translates to: SNILRSFITSSRLRLGEAFKSLN*KISLAA
Trigger: GGCTGCTAATGAAATCTTGCAGTTTAGTGACTTGAA...TGCTTCTCCTAGTCTCAATCGAGAAGAAGTGATGAAACTCCTCAGTATATTTGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp CAAGTGAAGAAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTATAAGCTGGAATGCGTaGTCAGTTCTCACCATTATA +
Preference number: 4 (lower is better)
Translates to: QVKKPQNSTVICLSLKITISWNA*SVLTII
Trigger: TATAATGGTGAGAACTGAGCACGCATTCCAGCTTAT...AGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTTCTTCACTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR CCA 90 bp CAAGTGAAGAAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTGAGCCGACCAACATATaGATATCTTCAAATGTCCAT +
Preference number: 4 (lower is better)
Translates to: QVKKPQNSTVICLSLKITEPTNI*ISSNVH
Trigger: ATGGACATTTGAAGATATCCATATGTTGGTCGGCTC...AGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTTCTTCACTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR CCA 90 bp AAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCTGTGTTTCGAGCCGACCAACATATaGATATCTTCAAATGTCCAT +
Preference number: 4 (lower is better)
Translates to: KPQNSTVICLSLKITLCFEPTNI*ISSNVH
Trigger: ATGGACATTTGAAGATATCCATATGTTGGTCGGCTC...GAAACACAGAGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
CDS-3UTR CCA 90 bp CAAGTGAAGAAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTACACATCACAAGCTCTaGCACATTGCATATCAAGTT +
Preference number: 4 (lower is better)
Translates to: QVKKPQNSTVICLSLKITTHHKL*HIAYQV
Trigger: AACTTGATATGCAATGTGCCAGAGCTTGTGATGTGT...AGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTTCTTCACTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR CCA 90 bp CAAGTGAAGAAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTATTTCTGAAGACTCATaGCAGCATCGGACAAAACAT +
Preference number: 4 (lower is better)
Translates to: QVKKPQNSTVICLSLKITISEDS*QHRTKH
Trigger: ATGTTTTGTCCGATGCTGCCATGAGTCTTCAGAAAT...AGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTTCTTCACTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR CCA 90 bp AAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCTGTGTTTCATTTCTGAAGACTCATaGCAGCATCGGACAAAACAT +
Preference number: 4 (lower is better)
Translates to: KPQNSTVICLSLKITLCFISEDS*QHRTKH
Trigger: ATGTTTTGTCCGATGCTGCCATGAGTCTTCAGAAAT...GAAACACAGAGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
CDS-3UTR TCA 90 bp AAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCTGTGTTTCCACATCATTTCCCACTaGATCAATAAAGTCATATGC +
Preference number: 4 (lower is better)
Translates to: KPQNSTVICLSLKITLCFHIISH*INKVIC
Trigger: GCATATGACTTTATTGATTCAGTGGGAAATGATGTG...GAAACACAGAGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
CDS-3UTR TCA 90 bp GTAAATGTGCTTGTTGGTTTTGAGAATTGTGTCATCTTCGATGTTATTGCTTGTCAACTAACAGAGAGTTaGCTTTCTAAGTCTGTAGAC +
Preference number: 4 (lower is better)
Translates to: VNVLVGFENCVIFDVIACQLTES*LSKSVD
Trigger: GTCTACAGACTTAGAAAGTCAACTCTCTGTTAGTTG...ACAAGCAATAACATCGAAGATGACACAATTCTCAAAACCAACAAGCACATTTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR TCA 90 bp AAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCTGTGTTTCGAGACTCAAATATACTaGGGAGTTTCATCACTTCTT +
Preference number: 4 (lower is better)
Translates to: KPQNSTVICLSLKITLCFETQIY*GVSSLL
Trigger: AAGAAGTGATGAAACTCCTCAGTATATTTGAGTCTC...GAAACACAGAGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
CDS-3UTR TCA 90 bp AAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCTGTGTTTCACTCTGTGTTTCCACTaGTATACCTGTTTTAAATGG +
Preference number: 4 (lower is better)
Translates to: KPQNSTVICLSLKITLCFTLCFH*YTCFKW
Trigger: CCATTTAAAACAGGTATATCAGTGGAAACACAGAGT...GAAACACAGAGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
CDS-3UTR GCA 90 bp CAAGTGAAGAAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTTCTTCATCATCATGTTaGAAGCAACCTTGTACAAGA +
Preference number: 4 (lower is better)
Translates to: QVKKPQNSTVICLSLKITSSSSC*KQPCTR
Trigger: TCTTGTACAAGGTTGCTTGCAACATGATGATGAAGA...AGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTTCTTCACTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR GCA 90 bp CAAGTGAAGAAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTAGTTTCATTTTATGTTaGCAAGAGCCAGGGATCATT +
Preference number: 4 (lower is better)
Translates to: QVKKPQNSTVICLSLKITSFILC*QEPGII
Trigger: AATGATCCCTGGCTCTTGGCAACATAAAATGAAACT...AGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTTCTTCACTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR GCA 90 bp CAAGTGAAGAAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTTTCAAGTCACTAAACTaGAAGATTTCATTAGCAGCC +
Preference number: 4 (lower is better)
Translates to: QVKKPQNSTVICLSLKITFKSLN*KISLAA
Trigger: GGCTGCTAATGAAATCTTGCAGTTTAGTGACTTGAA...AGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTTCTTCACTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR CCA 90 bp TATTTTGATTCTTCTTCATCATCATGTTGCAAGCAACCTTGTACAAGAGAATGGGAGCCGACCAACATATaGATATCTTCAAATGTCCAT +
Preference number: 4 (lower is better)
Translates to: YFDSSSSSCCKQPCTREWEPTNI*ISSNVH
Trigger: ATGGACATTTGAAGATATCCATATGTTGGTCGGCTC...CCATTCTCTTGTACAAGGTTGCTTGCAACATGATGATGAAGAAGAATCAAAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481600.5
ENST00000530795.1
CDS-3UTR CCA 90 bp TATTTTGATTCTTCTTCATCATCATGTTGCAAGCAACCTTGTACAAGAGAATGGACACATCACAAGCTCTaGCACATTGCATATCAAGTT +
Preference number: 4 (lower is better)
Translates to: YFDSSSSSCCKQPCTREWTHHKL*HIAYQV
Trigger: AACTTGATATGCAATGTGCCAGAGCTTGTGATGTGT...CCATTCTCTTGTACAAGGTTGCTTGCAACATGATGATGAAGAAGAATCAAAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481600.5
ENST00000530795.1
CDS-3UTR CCA 90 bp CCATTATATCAAGAGCCCCAGATAGTGTTTTCAACTTTCCAACATTGCTATTCTTACCGGCATTGTGAATaGATTTTGGTATTTGTCTTC +
Preference number: 4 (lower is better)
Translates to: PLYQEPQIVFSTFQHCYSYRHCE*ILVFVF
Trigger: GAAGACAAATACCAAAATCCATTCACAATGCCGGTA...AGAATAGCAATGTTGGAAAGTTGAAAACACTATCTGGGGCTCTTGATATAATGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CCA 90 bp AAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCTGTGTTTCTCATTCCAGATTGACTaGAATAATTGCCCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: KPQNSTVICLSLKITLCFSFQID*NNCPSE
Trigger: TTCAGAAGGGCAATTATTCCAGTCAATCTGGAATGA...GAAACACAGAGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
CDS-3UTR CCA 90 bp CAAGTGAAGAAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCATTGCTATTCTGACTaGTCATCTGAAATTCAGCAA +
Preference number: 4 (lower is better)
Translates to: QVKKPQNSTVICLSLKITHCYSD*SSEIQQ
Trigger: TTGCTGAATTTCAGATGACCAGTCAGAATAGCAATG...AGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTTCTTCACTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR CCA 90 bp CCATTATATCAAGAGCCCCAGATAGTGTTTTCAACTTTCCAACATTGCTATTCTCATTGCTATTCTGACTaGTCATCTGAAATTCAGCAA +
Preference number: 4 (lower is better)
Translates to: PLYQEPQIVFSTFQHCYSHCYSD*SSEIQQ
Trigger: TTGCTGAATTTCAGATGACCAGTCAGAATAGCAATG...AGAATAGCAATGTTGGAAAGTTGAAAACACTATCTGGGGCTCTTGATATAATGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CCA 90 bp CAAGTGAAGAAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTACCTGTAATGTCATCTaGATAAAAGTTCTCTTGACC +
Preference number: 4 (lower is better)
Translates to: QVKKPQNSTVICLSLKITTCNVI*IKVLLT
Trigger: GGTCAAGAGAACTTTTATCCAGATGACATTACAGGT...AGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTTCTTCACTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR TCA 90 bp GTAAATGTGCTTGTTGGTTTTGAGAATTGTGTCATCTTCGATGTTATTGCTTGTCGGCTCCATCACCATTaGTACTGTAATATAAAAACT +
Preference number: 4 (lower is better)
Translates to: VNVLVGFENCVIFDVIACRLHHH*YCNIKT
Trigger: AGTTTTTATATTACAGTATCAATGGTGATGGAGCCG...ACAAGCAATAACATCGAAGATGACACAATTCTCAAAACCAACAAGCACATTTAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR GCA 90 bp TATTTTGATTCTTCTTCATCATCATGTTGCAAGCAACCTTGTACAAGAGAATGGTCTTCATCATCATGTTaGAAGCAACCTTGTACAAGA +
Preference number: 4 (lower is better)
Translates to: YFDSSSSSCCKQPCTREWSSSSC*KQPCTR
Trigger: TCTTGTACAAGGTTGCTTGCAACATGATGATGAAGA...CCATTCTCTTGTACAAGGTTGCTTGCAACATGATGATGAAGAAGAATCAAAATA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481600.5
ENST00000530795.1
CDS-3UTR GCA 90 bp GTAAATGTGCTTGTTGGTTTTGAGAATTGTGTCATCTTCGATGTTATTGCTTGTAAACTCTTCAAGGTGTaGTGCTCTATTATTTGCATT +
Preference number: 4 (lower is better)
Translates to: VNVLVGFENCVIFDVIACKLFKV*CSIICI
Trigger: AATGCAAATAATAGAGCAGCACACCTTGAAGAGTTT...ACAAGCAATAACATCGAAGATGACACAATTCTCAAAACCAACAAGCACATTTAC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS CCA 90 bp CTCGAGCGGCGGCCCCGGCCGGCGGACCCTCGGCTCCGGCCTCCTTaGCATCCCCCATCACTTCGATCCAGGGCAGGCGATACGACGGGG +
Preference number: 5 (lower is better)
Translates to: LERRPRPADPRLRPP*HPPSLRSRAGDTTG
Trigger: CCCCGTCGTATCGCCTGCCCTGGATCGAAGTGATGGGGGATGCCAAGGAGGCCGGAGCCGAGGGTCCGCCGGCCGGGGCCGCCGCTCGAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
ENST00000525091.5
CDS GCA 90 bp TCGCGATCTTTGTCCCGAAGGCCCGGCCCCGCCTCCCGCTGCGGGTaGCACCTTCGCGGCCAGGGCGGGAATTGTAGTGCGCCTGCGCTT +
Preference number: 5 (lower is better)
Translates to: SRSLSRRPGPASRCG*HLRGQGGNCSAPAL
Trigger: AAGCGCAGGCGCACTACAATTCCCGCCCTGGCCGCGAAGGTGGCACCCGCAGCGGGAGGCGGGGCCGGGCCTTCGGGACAAAGATCGCGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CAA 90 bp CGGCATTGCTGCTCGCTGCACTGCCGGCGGCAAGCTGGCCCAGCAGGTGGACGAGTAGTGCGCCTGCGCTaGTCCGAACCTCTTCGGGAG +
Preference number: 5 (lower is better)
Translates to: RHCCSLHCRRQAGPAGGRVVRLR*SEPLRE
Trigger: CTCCCGAAGAGGTTCGGACAAGCGCAGGCGCACTAC...TCGTCCACCTGCTGGGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAATGCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419769.6
ENST00000481600.5
CDS CCA 90 bp AGAAATAAAGCTGATCCCTGTGCAGAAGATTCCTCGGATTCTCCCTaGGACAGGAGGCTGAGCCCTCCTCGAGCGGCGGCCCCGGCCGGC +
Preference number: 5 (lower is better)
Translates to: RNKADPCAEDSSDSP*DRRLSPPRAAAPAG
Trigger: GCCGGCCGGGGCCGCCGCTCGAGGAGGGCTCAGCCTCCTGTCCCAGGGAGAATCCGAGGAATCTTCTGCACAGGGATCAGCTTTATTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
ENST00000525091.5
CDS-3UTR CAA 90 bp CGGCATTGCTGCTCGCTGCACTGCCGGCGGCAAGCTGGCCCAGCAGGTGGACGATGCCAGCACCCGGTGTaGTTTCCTAAGGTGTTCATC +
Preference number: 5 (lower is better)
Translates to: RHCCSLHCRRQAGPAGGRCQHPV*FPKVFI
Trigger: GATGAACACCTTAGGAAACAACACCGGGTGCTGGCA...TCGTCCACCTGCTGGGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAATGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CAA 90 bp GCAGTCACTGAACGGCATTGCTGCTCGCTGCACTGCCGGCGGCAAGCTGGCCCACAAACCGGCTCCGTGTaGAAGGCACTGACAGCGTGT +
Preference number: 5 (lower is better)
Translates to: AVTERHCCSLHCRRQAGPQTGSV*KALTAC
Trigger: ACACGCTGTCAGTGCCTTCAACACGGAGCCGGTTTG...TGGGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAATGCCGTTCAGTGACTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000525358.1
CDS-3UTR CAA 90 bp CCTCAGACAGCTGTGGTACATGGAGGCCAGCCTGTGATGGATGGTTGCAGCTCGTCGGCTCCGGCCTCCTaGGCATCCCCCATCACTTCG +
Preference number: 5 (lower is better)
Translates to: PQTAVVHGGQPVMDGCSSSAPAS*ASPITS
Trigger: CGAAGTGATGGGGGATGCCAAGGAGGCCGGAGCCGA...CGAGCTGCAACCATCCATCACAGGCTGGCCTCCATGTACCACAGCTGTCTGAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CAA 90 bp ATTGCTGCTCGCTGCACTGCCGGCGGCAAGCTGGCCCAGCAGGTGGACGATAACCTCTCTCGTAACCAGTaGGCAGGTGGGAGTTTCAAG +
Preference number: 5 (lower is better)
Translates to: IAARCTAGGKLAQQVDDNLSRNQ*AGGSFK
Trigger: CTTGAAACTCCCACCTGCCAACTGGTTACGAGAGAG...GTTATCGTCCACCTGCTGGGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CAA 90 bp TTGCTGCTCGCTGCACTGCCGGCGGCAAGCTGGCCCAGCAGGTGGACGATAACGCATATTTTAACGGGATaGGAGTGCTGGGGTCAGCTG +
Preference number: 5 (lower is better)
Translates to: LLLAALPAASWPSRWTITHILTG*ECWGQL
Trigger: CAGCTGACCCCAGCACTCCAATCCCGTTAAAATATG...CGTTATCGTCCACCTGCTGGGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CAA 90 bp GGGACACGGCTCTGTGCAGTCACTGAACGGCATTGCTGCTCGCTGCACTGCCGGATCAGGTTTTGTTCTTaGGGGGCTGAGGCCACATGC +
Preference number: 5 (lower is better)
Translates to: GTRLCAVTERHCCSLHCRIRFCS*GAEATC
Trigger: GCATGTGGCCTCAGCCCCCAAAGAACAAAACCTGAT...CCGGCAGTGCAGCGAGCAGCAATGCCGTTCAGTGACTGCACAGAGCCGTGTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CAA 90 bp GGGACACGGCTCTGTGCAGTCACTGAACGGCATTGCTGCTCGCTGCACTGCCGGCCAAATATGGGCATGTaGGAGCCGACCAACATATGG +
Preference number: 5 (lower is better)
Translates to: GTRLCAVTERHCCSLHCRPNMGM*EPTNIW
Trigger: CCATATGTTGGTCGGCTCCAACATGCCCATATTTGG...CCGGCAGTGCAGCGAGCAGCAATGCCGTTCAGTGACTGCACAGAGCCGTGTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CAA 90 bp TGGAGGCCAGCCTGTGATGGATGGTTGCAGCTCGATACTGACAAAGGGGCTGTCCCTGCTGGCCCTAGTTaGGCACTCTCTCGTAACCAG +
Preference number: 5 (lower is better)
Translates to: WRPACDGWLQLDTDKGAVPAGPS*ALSRNQ
Trigger: CTGGTTACGAGAGAGTGCCAAACTAGGGCCAGCAGG...GACAGCCCCTTTGTCAGTATCGAGCTGCAACCATCCATCACAGGCTGGCCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CAA 90 bp TTGCTGCTCGCTGCACTGCCGGCGGCAAGCTGGCCCAGCAGGTGGACGATAACGACAAGCTCTGGCACATaGCATATCAAGTTGTCCAAC +
Preference number: 5 (lower is better)
Translates to: LLLAALPAASWPSRWTITTSSGT*HIKLSN
Trigger: GTTGGACAACTTGATATGCAATGTGCCAGAGCTTGT...CGTTATCGTCCACCTGCTGGGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CAA 90 bp TTGCTGCTCGCTGCACTGCCGGCGGCAAGCTGGCCCAGCAGGTGGACGATAACGATGTTGCAAGCAACCTaGTACAAGAGAATGGCTACC +
Preference number: 5 (lower is better)
Translates to: LLLAALPAASWPSRWTITMLQAT*YKRMAT
Trigger: GGTAGCCATTCTCTTGTACAAGGTTGCTTGCAACAT...CGTTATCGTCCACCTGCTGGGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CAA 90 bp GCATTGCTGCTCGCTGCACTGCCGGCGGCAAGCTGGCCCAGCAGGTGGACGATAGGCGGAAGCAATAATTaGAGGATGCCTACTTTTGTC +
Preference number: 5 (lower is better)
Translates to: ALLLAALPAASWPSRWTIGGSNN*RMPTFV
Trigger: GACAAAAGTAGGCATCCTCAAATTATTGCTTCCGCC...TATCGTCCACCTGCTGGGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CAA 90 bp GCATTGCTGCTCGCTGCACTGCCGGCGGCAAGCTGGCCCAGCAGGTGGACGATACGGTTTTATTTGCAGTaGCTCTCAAAAGCTGGGAGT +
Preference number: 5 (lower is better)
Translates to: ALLLAALPAASWPSRWTIRFYLQ*LSKAGS
Trigger: ACTCCCAGCTTTTGAGAGCAACTGCAAATAAAACCG...TATCGTCCACCTGCTGGGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
ENST00000525358.1
CDS-3UTR CAA 90 bp GCTGTGGTACATGGAGGCCAGCCTGTGATGGATGGTTGCAGCTCGATACTGACACCTGCTGGCCCTAGTTaGGCACTCTCTCGTAACCAG +
Preference number: 5 (lower is better)
Translates to: AVVHGGQPVMDGCSSILTPAGPS*ALSRNQ
Trigger: CTGGTTACGAGAGAGTGCCAAACTAGGGCCAGCAGG...TGTCAGTATCGAGCTGCAACCATCCATCACAGGCTGGCCTCCATGTACCACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CAA 90 bp GGGACACGGCTCTGTGCAGTCACTGAACGGCATTGCTGCTCGCTGCACTGCCGGACAAGCTCTGGCACATaGCATATCAAGTTGTCCAAC +
Preference number: 5 (lower is better)
Translates to: GTRLCAVTERHCCSLHCRTSSGT*HIKLSN
Trigger: GTTGGACAACTTGATATGCAATGTGCCAGAGCTTGT...CCGGCAGTGCAGCGAGCAGCAATGCCGTTCAGTGACTGCACAGAGCCGTGTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CAA 90 bp GGGACACGGCTCTGTGCAGTCACTGAACGGCATTGCTGCTCGCTGCACTGCCGGGGCGGAAGCAATAATTaGAGGATGCCTACTTTTGTC +
Preference number: 5 (lower is better)
Translates to: GTRLCAVTERHCCSLHCRGGSNN*RMPTFV
Trigger: GACAAAAGTAGGCATCCTCAAATTATTGCTTCCGCC...CCGGCAGTGCAGCGAGCAGCAATGCCGTTCAGTGACTGCACAGAGCCGTGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CAA 90 bp TTGCTGCTCGCTGCACTGCCGGCGGCAAGCTGGCCCAGCAGGTGGACGATAACGAGGTCGCTTTCTTTTTaGATGCTGCTATCGACAGAT +
Preference number: 5 (lower is better)
Translates to: LLLAALPAASWPSRWTITRSLSF*MLLSTD
Trigger: ATCTGTCGATAGCAGCATCAAAAAAGAAAGCGACCT...CGTTATCGTCCACCTGCTGGGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CAA 90 bp ATTGCTGCTCGCTGCACTGCCGGCGGCAAGCTGGCCCAGCAGGTGGACGATAACGTGCTGCTCTATTATTaGCATTCTGGGCCAGCATTA +
Preference number: 5 (lower is better)
Translates to: IAARCTAGGKLAQQVDDNVLLYY*HSGPAL
Trigger: TAATGCTGGCCCAGAATGCAAATAATAGAGCAGCAC...GTTATCGTCCACCTGCTGGGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CAA 90 bp GGGACACGGCTCTGTGCAGTCACTGAACGGCATTGCTGCTCGCTGCACTGCCGGCGGTTTTATTTGCAGTaGCTCTCAAAAGCTGGGAGT +
Preference number: 5 (lower is better)
Translates to: GTRLCAVTERHCCSLHCRRFYLQ*LSKAGS
Trigger: ACTCCCAGCTTTTGAGAGCAACTGCAAATAAAACCG...CCGGCAGTGCAGCGAGCAGCAATGCCGTTCAGTGACTGCACAGAGCCGTGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
ENST00000525358.1
CDS CCA 90 bp GAGCAGGCCATGAAGCCCCTTCCGAATCATTTGTCTGATCTGAACTaGACGATTCCTGCTGTTCTGCGGTGGATGAGACAGGCTGAGCGG +
Preference number: 5 (lower is better)
Translates to: EQAMKPLPNHLSDLN*TIPAVLRWMRQAER
Trigger: CCGCTCAGCCTGTCTCATCCACCGCAGAACAGCAGGAATCGTCCAGTTCAGATCAGACAAATGATTCGGAAGGGGCTTCATGGCCTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
ENST00000525091.5
CDS-3UTR CAA 90 bp AAGGCACTGACAGCGTGTCTGGGACACGGCTCTGTGCAGTCACTGAACGGCATTCTCTCTCGTAACCAGTaGGCAGGTGGGAGTTTCAAG +
Preference number: 5 (lower is better)
Translates to: KALTACLGHGSVQSLNGILSRNQ*AGGSFK
Trigger: CTTGAAACTCCCACCTGCCAACTGGTTACGAGAGAG...AATGCCGTTCAGTGACTGCACAGAGCCGTGTCCCAGACACGCTGTCAGTGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CAA 90 bp CACGGCTCTGTGCAGTCACTGAACGGCATTGCTGCTCGCTGCACTGCCGGCGGCAGCACATTAATTGGTTaGTTGTTATCCCTGAGACGT +
Preference number: 5 (lower is better)
Translates to: HGSVQSLNGIAARCTAGGSTLIG*LLSLRR
Trigger: ACGTCTCAGGGATAACAACAAACCAATTAATGTGCT...GCCGCCGGCAGTGCAGCGAGCAGCAATGCCGTTCAGTGACTGCACAGAGCCGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000419769.6
CDS-3UTR CAA 90 bp ATTGCTGCTCGCTGCACTGCCGGCGGCAAGCTGGCCCAGCAGGTGGACGATAACAGGGATCATTCCAGATaGACTGGAATAATTGCCCTT +
Preference number: 5 (lower is better)
Translates to: IAARCTAGGKLAQQVDDNRDHSR*TGIIAL
Trigger: AAGGGCAATTATTCCAGTCAATCTGGAATGATCCCT...GTTATCGTCCACCTGCTGGGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CAA 90 bp TTGCTGCTCGCTGCACTGCCGGCGGCAAGCTGGCCCAGCAGGTGGACGATAACGCTGGTCTTCTTTTGTTaGGTAATGAAACTCTTCAAG +
Preference number: 5 (lower is better)
Translates to: LLLAALPAASWPSRWTITLVFFC*VMKLFK
Trigger: CTTGAAGAGTTTCATTACCAAACAAAAGAAGACCAG...CGTTATCGTCCACCTGCTGGGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CAA 90 bp AACAAAGCACCGAATGAACAAACCGGCTCCGTGTTGAAGGCACTGACAGCGTGTCAAACCGGCTCCGTGTaGAAGGCACTGACAGCGTGT +
Preference number: 5 (lower is better)
Translates to: NKAPNEQTGSVLKALTACQTGSV*KALTAC
Trigger: ACACGCTGTCAGTGCCTTCAACACGGAGCCGGTTTG...ACACGCTGTCAGTGCCTTCAACACGGAGCCGGTTTGTTCATTCGGTGCTTTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
ENST00000525358.1
CDS-3UTR CAA 90 bp ATCAGCAGCTGCAGCGGCGTCACCACTCTTAGGCTGGCCAAATTCTTCTATAAGCAAACCGGCTCCGTGTaGAAGGCACTGACAGCGTGT +
Preference number: 5 (lower is better)
Translates to: ISSCSGVTTLRLAKFFYKQTGSV*KALTAC
Trigger: ACACGCTGTCAGTGCCTTCAACACGGAGCCGGTTTG...CTTATAGAAGAATTTGGCCAGCCTAAGAGTGGTGACGCCGCTGCAGCTGCTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000419769.6
CDS-3UTR CAA 90 bp AATCCCAAACAGCTGGGTGTATGTCTCGTGTTCCCAATGACCTTAGCGCTTTCAGTAGTGCGCCTGCGCTaGTCCGAACCTCTTCGGGAG +
Preference number: 5 (lower is better)
Translates to: NPKQLGVCLVFPMTLALSVVRLR*SEPLRE
Trigger: CTCCCGAAGAGGTTCGGACAAGCGCAGGCGCACTAC...TGAAAGCGCTAAGGTCATTGGGAACACGAGACATACACCCAGCTGTTTGGGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CAA 90 bp GGGCGGCATTGGTGGCATCCTCAATTGATTCAAAGTTGTGAATTCCCTTTTCAATCGGCTCCGGCCTCCTaGGCATCCCCCATCACTTCG +
Preference number: 5 (lower is better)
Translates to: GRHWWHPQLIQSCEFPFQSAPAS*ASPITS
Trigger: CGAAGTGATGGGGGATGCCAAGGAGGCCGGAGCCGA...TTGAAAAGGGAATTCACAACTTTGAATCAATTGAGGATGCCACCAATGCCGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CAA 90 bp CAGCTGAAACAGCTTTGCGGCCTTGCTGTAATGAAGATCTGCCAGCACCCGGTGCCCCTTCCGAATCATTaGTCTGATCTGAACTGGACG +
Preference number: 5 (lower is better)
Translates to: QLKQLCGLAVMKICQHPVPLPNH*SDLNWT
Trigger: CGTCCAGTTCAGATCAGACAAATGATTCGGAAGGGG...CACCGGGTGCTGGCAGATCTTCATTACAGCAAGGCCGCAAAGCTGTTTCAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CAA 90 bp ATTGCTGCTCGCTGCACTGCCGGCGGCAAGCTGGCCCAGCAGGTGGACGATAACACATTAATTGGTTTGTaGTTATCCCTGAGACGTAAG +
Preference number: 5 (lower is better)
Translates to: IAARCTAGGKLAQQVDDNTLIGL*LSLRRK
Trigger: CTTACGTCTCAGGGATAACAACAAACCAATTAATGT...GTTATCGTCCACCTGCTGGGCCAGCTTGCCGCCGGCAGTGCAGCGAGCAGCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000419769.6
CDS-3UTR CAA 90 bp GCTGTGGTACATGGAGGCCAGCCTGTGATGGATGGTTGCAGCTCGATACTGACAGCCTGTGATGGATGGTaGCAGCTCGATACTGACAAA +
Preference number: 5 (lower is better)
Translates to: AVVHGGQPVMDGCSSILTACDGW*QLDTDK
Trigger: TTTGTCAGTATCGAGCTGCAACCATCCATCACAGGC...TGTCAGTATCGAGCTGCAACCATCCATCACAGGCTGGCCTCCATGTACCACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CAA 90 bp TCTCGATTGAGACTAGGAGAAGCATCAGCAGCTGCAGCGGCGTCACCACTCTTATGCCAGCACCCGGTGTaGTTTCCTAAGGTGTTCATC +
Preference number: 5 (lower is better)
Translates to: SRLRLGEASAAAAASPLLCQHPV*FPKVFI
Trigger: GATGAACACCTTAGGAAACAACACCGGGTGCTGGCA...TAAGAGTGGTGACGCCGCTGCAGCTGCTGATGCTTCTCCTAGTCTCAATCGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS GCA 90 bp GGCAGGTGGGAGTTTCAAGTCTGTTTTCTCTTCAAGGCGTGCAAATaGTGTTCGAGGAGGGGCAGAAGAGTATTTCACCACAGCTCGGCT +
Preference number: 5 (lower is better)
Translates to: GRWEFQVCFLFKACK*CSRRGRRVFHHSSA
Trigger: AGCCGAGCTGTGGTGAAATACTCTTCTGCCCCTCCTCGAACAGCATTTGCACGCCTTGAAGAGAAAACAGACTTGAAACTCCCACCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
ENST00000525091.5
CDS-3UTR CAA 90 bp TCAGCTGAAGTTTCATTTTATGTTGCCAAGAGCCAGGGATCATTCCAGATTGACTCGGCTCCGGCCTCCTaGGCATCCCCCATCACTTCG +
Preference number: 5 (lower is better)
Translates to: SAEVSFYVAKSQGSFQIDSAPAS*ASPITS
Trigger: CGAAGTGATGGGGGATGCCAAGGAGGCCGGAGCCGA...GTCAATCTGGAATGATCCCTGGCTCTTGGCAACATAAAATGAAACTTCAGCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
CDS-3UTR CAA 90 bp AACAAAGCACCGAATGAACAAACCGGCTCCGTGTTGAAGGCACTGACAGCGTGTCTCTCTCGTAACCAGTaGGCAGGTGGGAGTTTCAAG +
Preference number: 5 (lower is better)
Translates to: NKAPNEQTGSVLKALTACLSRNQ*AGGSFK
Trigger: CTTGAAACTCCCACCTGCCAACTGGTTACGAGAGAG...ACACGCTGTCAGTGCCTTCAACACGGAGCCGGTTTGTTCATTCGGTGCTTTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
CDS-3UTR CAA 90 bp ACTGCCGGCGGCAAGCTGGCCCAGCAGGTGGACGATAACGTTGATTCTTTCCAGATGCCATGCCAAAGCTaGAAAATGGCTTGCTTTTCT +
Preference number: 5 (lower is better)
Translates to: TAGGKLAQQVDDNVDSFQMPCQS*KMACFS
Trigger: AGAAAAGCAAGCCATTTTCAAGCTTTGGCATGGCAT...CTGGAAAGAATCAACGTTATCGTCCACCTGCTGGGCCAGCTTGCCGCCGGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CAA 90 bp AGCAGCTGCAGCGGCGTCACCACTCTTAGGCTGGCCAAATTCTTCTATAAGCTCCCTCGGGACCCCCTCTaGAGGATTCATCTTCATATT +
Preference number: 5 (lower is better)
Translates to: SSCSGVTTLRLAKFFYKLPRDPL*RIHLHI
Trigger: AATATGAAGATGAATCCTCAAGAGGGGGTCCCGAGG...GAGCTTATAGAAGAATTTGGCCAGCCTAAGAGTGGTGACGCCGCTGCAGCTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CAA 90 bp TCTCGATTGAGACTAGGAGAAGCATCAGCAGCTGCAGCGGCGTCACCACTCTTAGCAGCAGACACAGATTaGCTCACTAGTCTCTCACTC +
Preference number: 5 (lower is better)
Translates to: SRLRLGEASAAAAASPLLAADTD*LTSLSL
Trigger: GAGTGAGAGACTAGTGAGCAAATCTGTGTCTGCTGC...TAAGAGTGGTGACGCCGCTGCAGCTGCTGATGCTTCTCCTAGTCTCAATCGAGA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CAA 90 bp ACTGACAGCGTGTCTGGGACACGGCTCTGTGCAGTCACTGAACGGCATTGCTGCCTGTGCTCCCCGTCATaGAATAAAGTAATCAGGTTT +
Preference number: 5 (lower is better)
Translates to: TDSVSGTRLCAVTERHCCLCSPS*NKVIRF
Trigger: AAACCTGATTACTTTATTCAATGACGGGGAGCACAG...GCAGCAATGCCGTTCAGTGACTGCACAGAGCCGTGTCCCAGACACGCTGTCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS TCA 90 bp ATTTCGAAGGGAGCAGGCCATGAAGCCCCTTCCGAATCATTTGTCTaGTCTGAACTGGACGATTCCTGCTGTTCTGCGGTGGATGAGACA +
Preference number: 5 (lower is better)
Translates to: ISKGAGHEAPSESFV*SELDDSCCSAVDET
Trigger: TGTCTCATCCACCGCAGAACAGCAGGAATCGTCCAGTTCAGATCAGACAAATGATTCGGAAGGGGCTTCATGGCCTGCTCCCTTCGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
ENST00000525091.5
CDS TCA 90 bp TCTGAATACTCAAATAAGCATGAGCTAGACTGCACAGTCCCACTGTaGACCACGTGGTCCAAGCCTGTGGCACACCTTGGCAACTGGACT +
Preference number: 5 (lower is better)
Translates to: SEYSNKHELDCTVPL*TTWSKPVAHLGNWT
Trigger: AGTCCAGTTGCCAAGGTGTGCCACAGGCTTGGACCACGTGGTTCACAGTGGGACTGTGCAGTCTAGCTCATGCTTATTTGAGTATTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368813.1
CDS GCA 90 bp CCAGTTGGCAGGTGGGAGTTTCAAGTCTGTTTTCTCTTCAAGGCGTaGAAATGCTGTTCGAGGAGGGGCAGAAGAGTATTTCACCACAGC +
Preference number: 5 (lower is better)
Translates to: PVGRWEFQVCFLFKA*KCCSRRGRRVFHHS
Trigger: GCTGTGGTGAAATACTCTTCTGCCCCTCCTCGAACAGCATTTGCACGCCTTGAAGAGAAAACAGACTTGAAACTCCCACCTGCCAACTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
ENST00000525091.5
CDS-3UTR CAA 90 bp GTGGAAGCTTTAAGTTTGATTCTGATGTTAGCACTTCAAGTGAAGAAGCCACAGTCGGCTCCGGCCTCCTaGGCATCCCCCATCACTTCG +
Preference number: 5 (lower is better)
Translates to: VEALSLILMLALQVKKPQSAPAS*ASPITS
Trigger: CGAAGTGATGGGGGATGCCAAGGAGGCCGGAGCCGA...CTGTGGCTTCTTCACTTGAAGTGCTAACATCAGAATCAAACTTAAAGCTTCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR CAA 90 bp AAGGCACTGACAGCGTGTCTGGGACACGGCTCTGTGCAGTCACTGAACGGCATTTTGCTTTTCTTGCTGTaGCCAAGAATGGTAGTTCCT +
Preference number: 5 (lower is better)
Translates to: KALTACLGHGSVQSLNGILLFLL*PRMVVP
Trigger: AGGAACTACCATTCTTGGCAACAGCAAGAAAAGCAA...AATGCCGTTCAGTGACTGCACAGAGCCGTGTCCCAGACACGCTGTCAGTGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CAA 90 bp AACAAAGCACCGAATGAACAAACCGGCTCCGTGTTGAAGGCACTGACAGCGTGTCCCCTTCCGAATCATTaGTCTGATCTGAACTGGACG +
Preference number: 5 (lower is better)
Translates to: NKAPNEQTGSVLKALTACPLPNH*SDLNWT
Trigger: CGTCCAGTTCAGATCAGACAAATGATTCGGAAGGGG...ACACGCTGTCAGTGCCTTCAACACGGAGCCGGTTTGTTCATTCGGTGCTTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
CDS-3UTR CAA 90 bp AACAAAGCACCGAATGAACAAACCGGCTCCGTGTTGAAGGCACTGACAGCGTGTCCAAATATGGGCATGTaGGAGCCGACCAACATATGG +
Preference number: 5 (lower is better)
Translates to: NKAPNEQTGSVLKALTACPNMGM*EPTNIW
Trigger: CCATATGTTGGTCGGCTCCAACATGCCCATATTTGG...ACACGCTGTCAGTGCCTTCAACACGGAGCCGGTTTGTTCATTCGGTGCTTTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
CDS-3UTR CAA 90 bp AGGCCAGCCTGTGATGGATGGTTGCAGCTCGATACTGACAAAGGGGCTGTCGAGAGGTCGCTTTCTTTTTaGATGCTGCTATCGACAGAT +
Preference number: 5 (lower is better)
Translates to: RPACDGWLQLDTDKGAVERSLSF*MLLSTD
Trigger: ATCTGTCGATAGCAGCATCAAAAAAGAAAGCGACCT...CTCGACAGCCCCTTTGTCAGTATCGAGCTGCAACCATCCATCACAGGCTGGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CAA 90 bp GCGGCGTCACCACTCTTAGGCTGGCCAAATTCTTCTATAAGCTCCTTCTGGATATGCCCATGCAAATCCTaGGCAACTGGACTCTCTGTG +
Preference number: 5 (lower is better)
Translates to: AASPLLGWPNSSISSFWICPCKS*ATGLSV
Trigger: CACAGAGAGTCCAGTTGCCAAGGATTTGCATGGGCA...TATCCAGAAGGAGCTTATAGAAGAATTTGGCCAGCCTAAGAGTGGTGACGCCGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
CDS-3UTR CAA 90 bp AACAAAGCACCGAATGAACAAACCGGCTCCGTGTTGAAGGCACTGACAGCGTGTGCAGCAGACACAGATTaGCTCACTAGTCTCTCACTC +
Preference number: 5 (lower is better)
Translates to: NKAPNEQTGSVLKALTACAADTD*LTSLSL
Trigger: GAGTGAGAGACTAGTGAGCAAATCTGTGTCTGCTGC...ACACGCTGTCAGTGCCTTCAACACGGAGCCGGTTTGTTCATTCGGTGCTTTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
CDS-3UTR CAA 90 bp AACAAAGCACCGAATGAACAAACCGGCTCCGTGTTGAAGGCACTGACAGCGTGTGCCTGTGATGGATGGTaGCAGCTCGATACTGACAAA +
Preference number: 5 (lower is better)
Translates to: NKAPNEQTGSVLKALTACACDGW*QLDTDK
Trigger: TTTGTCAGTATCGAGCTGCAACCATCCATCACAGGC...ACACGCTGTCAGTGCCTTCAACACGGAGCCGGTTTGTTCATTCGGTGCTTTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
CDS-3UTR CAA 90 bp GCGGCAAGCTGGCCCAGCAGGTGGACGATAACGTTGATTCTTTCCAGAAGAGTCCGGTTTTATTTGCAGTaGCTCTCAAAAGCTGGGAGT +
Preference number: 5 (lower is better)
Translates to: AASWPSRWTITLILSRRVRFYLQ*LSKAGS
Trigger: ACTCCCAGCTTTTGAGAGCAACTGCAAATAAAACCG...GACTCTTCTGGAAAGAATCAACGTTATCGTCCACCTGCTGGGCCAGCTTGCCGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
ENST00000525358.1
CDS-3UTR CAA 90 bp ATCAGCAGCTGCAGCGGCGTCACCACTCTTAGGCTGGCCAAATTCTTCTATAAGCCCAGTTTTAAAGCCTaGGCAACTGGACTCTCTGTG +
Preference number: 5 (lower is better)
Translates to: ISSCSGVTTLRLAKFFYKPSFKA*ATGLSV
Trigger: CACAGAGAGTCCAGTTGCCAAGGCTTTAAAACTGGG...CTTATAGAAGAATTTGGCCAGCCTAAGAGTGGTGACGCCGCTGCAGCTGCTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000419769.6
CDS-3UTR CAA 90 bp CAAAGGGGCTGTCGAGCAGACACTGAATCCACATCGCAGTATTTTAGGGACTTCCCCCTTCCGAATCATTaGTCTGATCTGAACTGGACG +
Preference number: 5 (lower is better)
Translates to: QRGCRADTESTSQYFRDFPLPNH*SDLNWT
Trigger: CGTCCAGTTCAGATCAGACAAATGATTCGGAAGGGG...GAAGTCCCTAAAATACTGCGATGTGGATTCAGTGTCTGCTCGACAGCCCCTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CAA 90 bp CACCCGGTGTTGTTTCCTAAGGTGTTCATCACCAACCTGATTCCTCAGACAGCTCCAAATATGGGCATGTaGGAGCCGACCAACATATGG +
Preference number: 5 (lower is better)
Translates to: HPVLFPKVFITNLIPQTAPNMGM*EPTNIW
Trigger: CCATATGTTGGTCGGCTCCAACATGCCCATATTTGG...AGCTGTCTGAGGAATCAGGTTGGTGATGAACACCTTAGGAAACAACACCGGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CAA 90 bp AGGCCAGCCTGTGATGGATGGTTGCAGCTCGATACTGACAAAGGGGCTGTCGAGAGTTCTCCAACAGACTaGATTATAGCTACTGCTTTG +
Preference number: 5 (lower is better)
Translates to: RPACDGWLQLDTDKGAVESSPTD*IIATAL
Trigger: CAAAGCAGTAGCTATAATCAAGTCTGTTGGAGAACT...CTCGACAGCCCCTTTGTCAGTATCGAGCTGCAACCATCCATCACAGGCTGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CAA 90 bp TCAGCAGCTGAAACAGCTTTGCGGCCTTGCTGTAATGAAGATCTGCCAGCACCCAATAAAAGGGCGGCATaGGTGGCATCCTCAATTGAT +
Preference number: 5 (lower is better)
Translates to: SAAETALRPCCNEDLPAPNKRAA*VASSID
Trigger: ATCAATTGAGGATGCCACCAATGCCGCCCTTTTATT...GGGTGCTGGCAGATCTTCATTACAGCAAGGCCGCAAAGCTGTTTCAGCTGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CAA 90 bp CACCCGGTGTTGTTTCCTAAGGTGTTCATCACCAACCTGATTCCTCAGACAGCTGCCTGTGATGGATGGTaGCAGCTCGATACTGACAAA +
Preference number: 5 (lower is better)
Translates to: HPVLFPKVFITNLIPQTAACDGW*QLDTDK
Trigger: TTTGTCAGTATCGAGCTGCAACCATCCATCACAGGC...AGCTGTCTGAGGAATCAGGTTGGTGATGAACACCTTAGGAAACAACACCGGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CAA 90 bp GCTGTGGTACATGGAGGCCAGCCTGTGATGGATGGTTGCAGCTCGATACTGACAATCACTTCTTCTCGATaGAGACTAGGAGAAGCATCA +
Preference number: 5 (lower is better)
Translates to: AVVHGGQPVMDGCSSILTITSSR*RLGEAS
Trigger: TGATGCTTCTCCTAGTCTCAATCGAGAAGAAGTGAT...TGTCAGTATCGAGCTGCAACCATCCATCACAGGCTGGCCTCCATGTACCACAGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CAA 90 bp GCAACTGGACTCTCTGTGAAGGCTATGCAGGATCTCCTGGTCTTCTTTTGTTTGATCAGGTTTTGTTCTTaGGGGGCTGAGGCCACATGC +
Preference number: 5 (lower is better)
Translates to: ATGLSVKAMQDLLVFFCLIRFCS*GAEATC
Trigger: GCATGTGGCCTCAGCCCCCAAAGAACAAAACCTGAT...CAAACAAAAGAAGACCAGGAGATCCTGCATAGCCTTCACAGAGAGTCCAGTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
CDS-3UTR CAA 90 bp GCGGCAAGCTGGCCCAGCAGGTGGACGATAACGTTGATTCTTTCCAGAAGAGTCCTGTGCTCCCCGTCATaGAATAAAGTAATCAGGTTT +
Preference number: 5 (lower is better)
Translates to: AASWPSRWTITLILSRRVLCSPS*NKVIRF
Trigger: AAACCTGATTACTTTATTCAATGACGGGGAGCACAG...GACTCTTCTGGAAAGAATCAACGTTATCGTCCACCTGCTGGGCCAGCTTGCCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS GCA 90 bp TTTCAGCAGCTGAAACAGCTTTGCGGCCTTGCTGTAATGAAGATCTaGCAGCACCCGGTGTTGTTTCCTAAGGTGTTCATCACCAACCTA +
Preference number: 5 (lower is better)
Translates to: FQQLKQLCGLAVMKI*QHPVLFPKVFITNL
Trigger: TAGGTTGGTGATGAACACCTTAGGAAACAACACCGGGTGCTGGCAGATCTTCATTACAGCAAGGCCGCAAAGCTGTTTCAGCTGCTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368812.1
ENST00000527655.5
CDS GCA 90 bp CTCTGTGTTCCCATCTCAAGGCTACAAGAAGCCAATCCGTGCTGCTaGTTTCTGACTCAGGCTGAGCATGATGATGCACTTGTTTCCTTT +
Preference number: 5 (lower is better)
Translates to: LCVPISRLQEANPCC*FLTQAEHDDALVSF
Trigger: AAAGGAAACAAGTGCATCATCATGCTCAGCCTGAGTCAGAAAGCAGCAGCACGGATTGGCTTCTTGTAGCCTTGAGATGGGAACACAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469725.1
CDS-3UTR CAA 90 bp CAAGTGAAGAAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTTCGGCTCCGGCCTCCTaGGCATCCCCCATCACTTCG +
Preference number: 5 (lower is better)
Translates to: QVKKPQNSTVICLSLKITSAPAS*ASPITS
Trigger: CGAAGTGATGGGGGATGCCAAGGAGGCCGGAGCCGA...AGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTTCTTCACTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR CAA 90 bp CCCAAACAGCTGGGTGTATGTCTCGTGTTCCCAATGACCTTAGCGCTTTCAAATCCCCTTCCGAATCATTaGTCTGATCTGAACTGGACG +
Preference number: 5 (lower is better)
Translates to: PKQLGVCLVFPMTLALSNPLPNH*SDLNWT
Trigger: CGTCCAGTTCAGATCAGACAAATGATTCGGAAGGGG...ATTTGAAAGCGCTAAGGTCATTGGGAACACGAGACATACACCCAGCTGTTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CAA 90 bp AACAAAGCACCGAATGAACAAACCGGCTCCGTGTTGAAGGCACTGACAGCGTGTACAAGCTCTGGCACATaGCATATCAAGTTGTCCAAC +
Preference number: 5 (lower is better)
Translates to: NKAPNEQTGSVLKALTACTSSGT*HIKLSN
Trigger: GTTGGACAACTTGATATGCAATGTGCCAGAGCTTGT...ACACGCTGTCAGTGCCTTCAACACGGAGCCGGTTTGTTCATTCGGTGCTTTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
CDS-3UTR CAA 90 bp AACAAAGCACCGAATGAACAAACCGGCTCCGTGTTGAAGGCACTGACAGCGTGTATGTTGCAAGCAACCTaGTACAAGAGAATGGCTACC +
Preference number: 5 (lower is better)
Translates to: NKAPNEQTGSVLKALTACMLQAT*YKRMAT
Trigger: GGTAGCCATTCTCTTGTACAAGGTTGCTTGCAACAT...ACACGCTGTCAGTGCCTTCAACACGGAGCCGGTTTGTTCATTCGGTGCTTTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
CDS-3UTR CAA 90 bp AACAAAGCACCGAATGAACAAACCGGCTCCGTGTTGAAGGCACTGACAGCGTGTGGCGGAAGCAATAATTaGAGGATGCCTACTTTTGTC +
Preference number: 5 (lower is better)
Translates to: NKAPNEQTGSVLKALTACGGSNN*RMPTFV
Trigger: GACAAAAGTAGGCATCCTCAAATTATTGCTTCCGCC...ACACGCTGTCAGTGCCTTCAACACGGAGCCGGTTTGTTCATTCGGTGCTTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
CDS-3UTR CAA 90 bp GCAACTGGACTCTCTGTGAAGGCTATGCAGGATCTCCTGGTCTTCTTTTGTTTGCATATTTTAACGGGATaGGAGTGCTGGGGTCAGCTG +
Preference number: 5 (lower is better)
Translates to: ATGLSVKAMQDLLVFFCLHILTG*ECWGQL
Trigger: CAGCTGACCCCAGCACTCCAATCCCGTTAAAATATG...CAAACAAAAGAAGACCAGGAGATCCTGCATAGCCTTCACAGAGAGTCCAGTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
CDS-3UTR CAA 90 bp AAGCAGTTCGCAGGGAGCATCTTTCAGCAGCTGAAACAGCTTTGCGGCCTTGCTAGGGATCATTCCAGATaGACTGGAATAATTGCCCTT +
Preference number: 5 (lower is better)
Translates to: KQFAGSIFQQLKQLCGLARDHSR*TGIIAL
Trigger: AAGGGCAATTATTCCAGTCAATCTGGAATGATCCCT...AGCAAGGCCGCAAAGCTGTTTCAGCTGCTGAAAGATGCTCCCTGCGAACTGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CAA 90 bp AGCATCTTTCAGCAGCTGAAACAGCTTTGCGGCCTTGCTGTAATGAAGATCTGCGCAGCTGAAACAGCTTaGCGGCCTTGCTGTAATGAA +
Preference number: 5 (lower is better)
Translates to: SIFQQLKQLCGLAVMKICAAETA*RPCCNE
Trigger: TTCATTACAGCAAGGCCGCAAAGCTGTTTCAGCTGC...GCAGATCTTCATTACAGCAAGGCCGCAAAGCTGTTTCAGCTGCTGAAAGATGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CAA 90 bp GCCTGTGATGGATGGTTGCAGCTCGATACTGACAAAGGGGCTGTCGAGCAGACAATGTGCTTGTTGGTTTaGAGAATTGTGTCATCTTCG +
Preference number: 5 (lower is better)
Translates to: ACDGWLQLDTDKGAVEQTMCLLV*RIVSSS
Trigger: CGAAGATGACACAATTCTCAAAACCAACAAGCACAT...TGTCTGCTCGACAGCCCCTTTGTCAGTATCGAGCTGCAACCATCCATCACAGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CAA 90 bp AACAAAGCACCGAATGAACAAACCGGCTCCGTGTTGAAGGCACTGACAGCGTGTCGGTTTTATTTGCAGTaGCTCTCAAAAGCTGGGAGT +
Preference number: 5 (lower is better)
Translates to: NKAPNEQTGSVLKALTACRFYLQ*LSKAGS
Trigger: ACTCCCAGCTTTTGAGAGCAACTGCAAATAAAACCG...ACACGCTGTCAGTGCCTTCAACACGGAGCCGGTTTGTTCATTCGGTGCTTTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
ENST00000525358.1
CDS-3UTR CAA 90 bp AACAAAGCACCGAATGAACAAACCGGCTCCGTGTTGAAGGCACTGACAGCGTGTAGGTGGACGATAACGTaGATTCTTTCCAGAAGAGTC +
Preference number: 5 (lower is better)
Translates to: NKAPNEQTGSVLKALTACRWTIT*ILSRRV
Trigger: GACTCTTCTGGAAAGAATCAACGTTATCGTCCACCT...ACACGCTGTCAGTGCCTTCAACACGGAGCCGGTTTGTTCATTCGGTGCTTTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
ENST00000525358.1
CDS-3UTR CAA 90 bp AACAAAGCACCGAATGAACAAACCGGCTCCGTGTTGAAGGCACTGACAGCGTGTCACAACAGCTCGTCTTaGAAAAATCCTGCACTGAAG +
Preference number: 5 (lower is better)
Translates to: NKAPNEQTGSVLKALTACHNSSS*KNPALK
Trigger: CTTCAGTGCAGGATTTTTCAAAGACGAGCTGTTGTG...ACACGCTGTCAGTGCCTTCAACACGGAGCCGGTTTGTTCATTCGGTGCTTTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR CAA 90 bp GACACTGAATCCACATCGCAGTATTTTAGGGACTTCATCATGGCCTCACTGACTATCAGGTTTTGTTCTTaGGGGGCTGAGGCCACATGC +
Preference number: 5 (lower is better)
Translates to: DTESTSQYFRDFIMASLTIRFCS*GAEATC
Trigger: GCATGTGGCCTCAGCCCCCAAAGAACAAAACCTGAT...AGTCAGTGAGGCCATGATGAAGTCCCTAAAATACTGCGATGTGGATTCAGTGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS GCA 90 bp TTTCATCACTTCTTCTCGATTGAGACTAGGAGAAGCATCAGCAGCTaGAGCGGCGTCACCACTCTTAGGTGGTCATCTGAAATTCAGCAA +
Preference number: 5 (lower is better)
Translates to: FHHFFSIETRRSISS*SGVTTLRWSSEIQQ
Trigger: TTGCTGAATTTCAGATGACCACCTAAGAGTGGTGACGCCGCTGCAGCTGCTGATGCTTCTCCTAGTCTCAATCGAGAAGAAGTGATGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527655.5
CDS GCA 90 bp ACAGGCAGTAAGCCACAGAACACCAACAGCGGATTCGTTTTCCCATaGTCAACATGGAGCACAATGCGGACATATTGTTTAAGTGGCACA +
Preference number: 5 (lower is better)
Translates to: TGSKPQNTNSGFVFP*STWSTMRTYCLSGT
Trigger: TGTGCCACTTAAACAATATGTCCGCATTGTGCTCCATGTTGAGCATGGGAAAACGAATCCGCTGTTGGTGTTCTGTGGCTTACTGCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525091.5
CDS GCA 90 bp CCTAATATCCTGAGGGCAAAAGCAAGCTTAAGGGTGCCAAGACAATaGAGCAGAGGAGTAGTCTTTTCAGCAAATGGTGCTGGGACAACT +
Preference number: 5 (lower is better)
Translates to: PNILRAKASLRVPRQ*SRGVVFSANGAGTT
Trigger: AGTTGTCCCAGCACCATTTGCTGAAAAGACTACTCCTCTGCTGCATTGTCTTGGCACCCTTAAGCTTGCTTTTGCCCTCAGGATATTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525091.5
CDS-3UTR CAA 90 bp TTCATCATCATGTTGCAAGCAACCTTGTACAAGAGAATGGCTACCGGCATTGTGCTCTCTCGTAACCAGTaGGCAGGTGGGAGTTTCAAG +
Preference number: 5 (lower is better)
Translates to: FIIMLQATLYKRMATGIVLSRNQ*AGGSFK
Trigger: CTTGAAACTCCCACCTGCCAACTGGTTACGAGAGAG...CACAATGCCGGTAGCCATTCTCTTGTACAAGGTTGCTTGCAACATGATGATGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481600.5
CDS-3UTR CAA 90 bp AACAAAGCACCGAATGAACAAACCGGCTCCGTGTTGAAGGCACTGACAGCGTGTTTGCTTTTCTTGCTGTaGCCAAGAATGGTAGTTCCT +
Preference number: 5 (lower is better)
Translates to: NKAPNEQTGSVLKALTACLLFLL*PRMVVP
Trigger: AGGAACTACCATTCTTGGCAACAGCAAGAAAAGCAA...ACACGCTGTCAGTGCCTTCAACACGGAGCCGGTTTGTTCATTCGGTGCTTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
CDS-3UTR CAA 90 bp AACAAAGCACCGAATGAACAAACCGGCTCCGTGTTGAAGGCACTGACAGCGTGTATGCCATGCCAAAGCTaGAAAATGGCTTGCTTTTCT +
Preference number: 5 (lower is better)
Translates to: NKAPNEQTGSVLKALTACMPCQS*KMACFS
Trigger: AGAAAAGCAAGCCATTTTCAAGCTTTGGCATGGCAT...ACACGCTGTCAGTGCCTTCAACACGGAGCCGGTTTGTTCATTCGGTGCTTTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
CDS-3UTR CAA 90 bp AACAAAGCACCGAATGAACAAACCGGCTCCGTGTTGAAGGCACTGACAGCGTGTAGGTCGCTTTCTTTTTaGATGCTGCTATCGACAGAT +
Preference number: 5 (lower is better)
Translates to: NKAPNEQTGSVLKALTACRSLSF*MLLSTD
Trigger: ATCTGTCGATAGCAGCATCAAAAAAGAAAGCGACCT...ACACGCTGTCAGTGCCTTCAACACGGAGCCGGTTTGTTCATTCGGTGCTTTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
CDS-3UTR CAA 90 bp GCGGCGTCACCACTCTTAGGCTGGCCAAATTCTTCTATAAGCTCCTTCTGGATAGTGCTGCTCTATTATTaGCATTCTGGGCCAGCATTA +
Preference number: 5 (lower is better)
Translates to: AASPLLGWPNSSISSFWIVLLYY*HSGPAL
Trigger: TAATGCTGGCCCAGAATGCAAATAATAGAGCAGCAC...TATCCAGAAGGAGCTTATAGAAGAATTTGGCCAGCCTAAGAGTGGTGACGCCGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CAA 90 bp CACCCGGTGTTGTTTCCTAAGGTGTTCATCACCAACCTGATTCCTCAGACAGCTCGGTTTTATTTGCAGTaGCTCTCAAAAGCTGGGAGT +
Preference number: 5 (lower is better)
Translates to: HPVLFPKVFITNLIPQTARFYLQ*LSKAGS
Trigger: ACTCCCAGCTTTTGAGAGCAACTGCAAATAAAACCG...AGCTGTCTGAGGAATCAGGTTGGTGATGAACACCTTAGGAAACAACACCGGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CAA 90 bp AGCGGCGTCACCACTCTTAGGCTGGCCAAATTCTTCTATAAGCTCCTTCTGGATGAGTCGCGGTTTTATTaGCAGTTGCTCTCAAAAGCT +
Preference number: 5 (lower is better)
Translates to: SGVTTLRLAKFFYKLLLDESRFY*QLLSKA
Trigger: AGCTTTTGAGAGCAACTGCAAATAAAACCGCGACTC...ATCCAGAAGGAGCTTATAGAAGAATTTGGCCAGCCTAAGAGTGGTGACGCCGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS TCA 90 bp GCTACGTGTGCCAACACAGATGTATCTCAAAAACACGATGTTAAGTaGCAGGCAGTAAGCCACAGAACACCAACAGCGGATTCGTTTTCC +
Preference number: 5 (lower is better)
Translates to: ATCANTDVSQKHDVK*QAVSHRTPTADSFS
Trigger: GGAAAACGAATCCGCTGTTGGTGTTCTGTGGCTTACTGCCTGTCACTTAACATCGTGTTTTTGAGATACATCTGTGTTGGCACACGTAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525091.5
CDS-3UTR CAA 90 bp AAGCTGGGAGTAAATGTGCTTGTTGGTTTTGAGAATTGTGTCATCTTCGATGTTCCTGCTGGCCCTAGTTaGGCACTCTCTCGTAACCAG +
Preference number: 5 (lower is better)
Translates to: KLGVNVLVGFENCVIFDVPAGPS*ALSRNQ
Trigger: CTGGTTACGAGAGAGTGCCAAACTAGGGCCAGCAGG...AACATCGAAGATGACACAATTCTCAAAACCAACAAGCACATTTACTCCCAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CAA 90 bp AGCGGCGTCACCACTCTTAGGCTGGCCAAATTCTTCTATAAGCTCCTTCTGGATTTGCTTTTCTTGCTGTaGCCAAGAATGGTAGTTCCT +
Preference number: 5 (lower is better)
Translates to: SGVTTLRLAKFFYKLLLDLLFLL*PRMVVP
Trigger: AGGAACTACCATTCTTGGCAACAGCAAGAAAAGCAA...ATCCAGAAGGAGCTTATAGAAGAATTTGGCCAGCCTAAGAGTGGTGACGCCGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CAA 90 bp AACAAAGCACCGAATGAACAAACCGGCTCCGTGTTGAAGGCACTGACAGCGTGTAGCACATTAATTGGTTaGTTGTTATCCCTGAGACGT +
Preference number: 5 (lower is better)
Translates to: NKAPNEQTGSVLKALTACSTLIG*LLSLRR
Trigger: ACGTCTCAGGGATAACAACAAACCAATTAATGTGCT...ACACGCTGTCAGTGCCTTCAACACGGAGCCGGTTTGTTCATTCGGTGCTTTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
CDS-3UTR CAA 90 bp AACAAAGCACCGAATGAACAAACCGGCTCCGTGTTGAAGGCACTGACAGCGTGTAGTTCTCCAACAGACTaGATTATAGCTACTGCTTTG +
Preference number: 5 (lower is better)
Translates to: NKAPNEQTGSVLKALTACSSPTD*IIATAL
Trigger: CAAAGCAGTAGCTATAATCAAGTCTGTTGGAGAACT...ACACGCTGTCAGTGCCTTCAACACGGAGCCGGTTTGTTCATTCGGTGCTTTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
CDS-3UTR CAA 90 bp AACAAAGCACCGAATGAACAAACCGGCTCCGTGTTGAAGGCACTGACAGCGTGTTGGTGGCATCCTCAATaGATTCAAAGTTGTGAATTC +
Preference number: 5 (lower is better)
Translates to: NKAPNEQTGSVLKALTACWWHPQ*IQSCEF
Trigger: GAATTCACAACTTTGAATCAATTGAGGATGCCACCA...ACACGCTGTCAGTGCCTTCAACACGGAGCCGGTTTGTTCATTCGGTGCTTTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
CDS-3UTR CAA 90 bp AGCATCTTTCAGCAGCTGAAACAGCTTTGCGGCCTTGCTGTAATGAAGATCTGCAATAAAAGGGCGGCATaGGTGGCATCCTCAATTGAT +
Preference number: 5 (lower is better)
Translates to: SIFQQLKQLCGLAVMKICNKRAA*VASSID
Trigger: ATCAATTGAGGATGCCACCAATGCCGCCCTTTTATT...GCAGATCTTCATTACAGCAAGGCCGCAAAGCTGTTTCAGCTGCTGAAAGATGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CAA 90 bp AAACAACAGCACTTCGGAAAGCATATTGGTGCAGAGGCAGCAATAAGTATCATGTGCCAGCACCCGGTGTaGTTTCCTAAGGTGTTCATC +
Preference number: 5 (lower is better)
Translates to: KQQHFGKHIGAEAAISIMCQHPV*FPKVFI
Trigger: GATGAACACCTTAGGAAACAACACCGGGTGCTGGCA...CATGATACTTATTGCTGCCTCTGCACCAATATGCTTTCCGAAGTGCTGTTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
CDS-3UTR CAA 90 bp GCAACTGGACTCTCTGTGAAGGCTATGCAGGATCTCCTGGTCTTCTTTTGTTTGGAGTCGCGGTTTTATTaGCAGTTGCTCTCAAAAGCT +
Preference number: 5 (lower is better)
Translates to: ATGLSVKAMQDLLVFFCLESRFY*QLLSKA
Trigger: AGCTTTTGAGAGCAACTGCAAATAAAACCGCGACTC...CAAACAAAAGAAGACCAGGAGATCCTGCATAGCCTTCACAGAGAGTCCAGTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
CDS-3UTR CAA 90 bp AGTTTCTTCACAAAGAGTAGTGAGGTCATAGAGCTTCACTATATCGCTGCCACTATCAGGTTTTGTTCTTaGGGGGCTGAGGCCACATGC +
Preference number: 5 (lower is better)
Translates to: SFFTKSSEVIELHYIAATIRFCS*GAEATC
Trigger: GCATGTGGCCTCAGCCCCCAAAGAACAAAACCTGAT...AGTGGCAGCGATATAGTGAAGCTCTATGACCTCACTACTCTTTGTGAAGAAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000481600.5
ENST00000530795.1
CDS GCA 90 bp AGAGTTCTTGAATATCTAGCTCATCTAGTAAGAGAGTCCTTCCTATaGGGTGTACTGCCATGCTCACGTGCGACTTGCTGTAGGGAATTT +
Preference number: 5 (lower is better)
Translates to: RVLEYLAHLVRESFL*GVLPCSRATCCREF
Trigger: AAATTCCCTACAGCAAGTCGCACGTGAGCATGGCAGTACACCGCATAGGAAGGACTCTCTTACTAGATGAGCTAGATATTCAAGAACTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
ENST00000525091.5
CDS CCA 90 bp AAGCCACAGAACACCAACAGCGGATTCGTTTTCCCATGCTCAACATaGAGCACAATGCGGACATATTGTTTAAGTGGCACAGCACAAAAA +
Preference number: 5 (lower is better)
Translates to: KPQNTNSGFVFPCST*STMRTYCLSGTAQK
Trigger: TTTTTGTGCTGTGCCACTTAAACAATATGTCCGCATTGTGCTCCATGTTGAGCATGGGAAAACGAATCCGCTGTTGGTGTTCTGTGGCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525091.5
CDS-3UTR CAA 90 bp CAAGTGAAGAAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCCTGCTGGCCCTAGTTaGGCACTCTCTCGTAACCAG +
Preference number: 5 (lower is better)
Translates to: QVKKPQNSTVICLSLKITPAGPS*ALSRNQ
Trigger: CTGGTTACGAGAGAGTGCCAAACTAGGGCCAGCAGG...AGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTTCTTCACTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR CAA 90 bp AGCATCTTTCAGCAGCTGAAACAGCTTTGCGGCCTTGCTGTAATGAAGATCTGCTTGCTTTTCTTGCTGTaGCCAAGAATGGTAGTTCCT +
Preference number: 5 (lower is better)
Translates to: SIFQQLKQLCGLAVMKICLLFLL*PRMVVP
Trigger: AGGAACTACCATTCTTGGCAACAGCAAGAAAAGCAA...GCAGATCTTCATTACAGCAAGGCCGCAAAGCTGTTTCAGCTGCTGAAAGATGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CAA 90 bp AACAAAGCACCGAATGAACAAACCGGCTCCGTGTTGAAGGCACTGACAGCGTGTAAAACTTGGAAAGAATaGCCTTTTGATACCAGTGCT +
Preference number: 5 (lower is better)
Translates to: NKAPNEQTGSVLKALTACKTWKE*PFDTSA
Trigger: AGCACTGGTATCAAAAGGCAATTCTTTCCAAGTTTT...ACACGCTGTCAGTGCCTTCAACACGGAGCCGGTTTGTTCATTCGGTGCTTTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
CDS-3UTR CAA 90 bp GATCTCCTGGTCTTCTTTTGTTTGGTAATGAAACTCTTCAAGGTGTGCTGCTCTCCAAATATGGGCATGTaGGAGCCGACCAACATATGG +
Preference number: 5 (lower is better)
Translates to: DLLVFFCLVMKLFKVCCSPNMGM*EPTNIW
Trigger: CCATATGTTGGTCGGCTCCAACATGCCCATATTTGG...AGAGCAGCACACCTTGAAGAGTTTCATTACCAAACAAAAGAAGACCAGGAGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
CDS-3UTR CAA 90 bp AGTTTCTTCACAAAGAGTAGTGAGGTCATAGAGCTTCACTATATCGCTGCCACTCCAAATATGGGCATGTaGGAGCCGACCAACATATGG +
Preference number: 5 (lower is better)
Translates to: SFFTKSSEVIELHYIAATPNMGM*EPTNIW
Trigger: CCATATGTTGGTCGGCTCCAACATGCCCATATTTGG...AGTGGCAGCGATATAGTGAAGCTCTATGACCTCACTACTCTTTGTGAAGAAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481600.5
ENST00000530795.1
CDS-3UTR CAA 90 bp AACAAAGCACCGAATGAACAAACCGGCTCCGTGTTGAAGGCACTGACAGCGTGTACATTAATTGGTTTGTaGTTATCCCTGAGACGTAAG +
Preference number: 5 (lower is better)
Translates to: NKAPNEQTGSVLKALTACTLIGL*LSLRRK
Trigger: CTTACGTCTCAGGGATAACAACAAACCAATTAATGT...ACACGCTGTCAGTGCCTTCAACACGGAGCCGGTTTGTTCATTCGGTGCTTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
CDS-3UTR CAA 90 bp AACAAAGCACCGAATGAACAAACCGGCTCCGTGTTGAAGGCACTGACAGCGTGTATTATAGCTACTGCTTaGCTATCATCTGATGGATCA +
Preference number: 5 (lower is better)
Translates to: NKAPNEQTGSVLKALTACIIATA*LSSDGS
Trigger: TGATCCATCAGATGATAGCAAAGCAGTAGCTATAAT...ACACGCTGTCAGTGCCTTCAACACGGAGCCGGTTTGTTCATTCGGTGCTTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
CDS-3UTR CAA 90 bp GCCCAGCAGGTGGACGATAACGTTGATTCTTTCCAGAAGAGTCGCGGTTTTATTAGGTCGCTTTCTTTTTaGATGCTGCTATCGACAGAT +
Preference number: 5 (lower is better)
Translates to: AQQVDDNVDSFQKSRGFIRSLSF*MLLSTD
Trigger: ATCTGTCGATAGCAGCATCAAAAAAGAAAGCGACCT...AATAAAACCGCGACTCTTCTGGAAAGAATCAACGTTATCGTCCACCTGCTGGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CAA 90 bp CAAGAGCCCCAGATAGTGTTTTCAACTTTCCAACATTGCTATTCTGACTGGTCACCTCGGGACCCCCTCTaGAGGATTCATCTTCATATT +
Preference number: 5 (lower is better)
Translates to: QEPQIVFSTFQHCYSDWSPRDPL*RIHLHI
Trigger: AATATGAAGATGAATCCTCAAGAGGGGGTCCCGAGG...TGACCAGTCAGAATAGCAATGTTGGAAAGTTGAAAACACTATCTGGGGCTCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CAA 90 bp TTGAGGATTCATCTTCATATTTTAACGGGATTGGAGTGCTGGGGTCAGCTGCTGGTGCTGCTCTATTATTaGCATTCTGGGCCAGCATTA +
Preference number: 5 (lower is better)
Translates to: LRIHLHILTGLECWGQLLVLLYY*HSGPAL
Trigger: TAATGCTGGCCCAGAATGCAAATAATAGAGCAGCAC...CAGCAGCTGACCCCAGCACTCCAATCCCGTTAAAATATGAAGATGAATCCTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
CDS-3UTR CAA 90 bp GTGGAAGCTTTAAGTTTGATTCTGATGTTAGCACTTCAAGTGAAGAAGCCACAGTGCCCATGCAAATCCTaGGCAACTGGACTCTCTGTG +
Preference number: 5 (lower is better)
Translates to: VEALSLILMLALQVKKPQCPCKS*ATGLSV
Trigger: CACAGAGAGTCCAGTTGCCAAGGATTTGCATGGGCA...CTGTGGCTTCTTCACTTGAAGTGCTAACATCAGAATCAAACTTAAAGCTTCCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR CAA 90 bp AAAGGGCGGCATTGGTGGCATCCTCAATTGATTCAAAGTTGTGAATTCCCTTTTGCAGCAGACACAGATTaGCTCACTAGTCTCTCACTC +
Preference number: 5 (lower is better)
Translates to: KGRHWWHPQLIQSCEFPFAADTD*LTSLSL
Trigger: GAGTGAGAGACTAGTGAGCAAATCTGTGTCTGCTGC...AAAAGGGAATTCACAACTTTGAATCAATTGAGGATGCCACCAATGCCGCCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CAA 90 bp GCCAAGAGCCAGGGATCATTCCAGATTGACTGGAATAATTGCCCTTCTGAAGGGTGGTGGCATCCTCAATaGATTCAAAGTTGTGAATTC +
Preference number: 5 (lower is better)
Translates to: AKSQGSFQIDWNNCPSEGWWHPQ*IQSCEF
Trigger: GAATTCACAACTTTGAATCAATTGAGGATGCCACCA...CCCTTCAGAAGGGCAATTATTCCAGTCAATCTGGAATGATCCCTGGCTCTTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
CDS-3UTR CAA 90 bp TCAGCTGAAGTTTCATTTTATGTTGCCAAGAGCCAGGGATCATTCCAGATTGACGCCTGTGATGGATGGTaGCAGCTCGATACTGACAAA +
Preference number: 5 (lower is better)
Translates to: SAEVSFYVAKSQGSFQIDACDGW*QLDTDK
Trigger: TTTGTCAGTATCGAGCTGCAACCATCCATCACAGGC...GTCAATCTGGAATGATCCCTGGCTCTTGGCAACATAAAATGAAACTTCAGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
CDS-3UTR CAA 90 bp TTGATTCTTTCCAGAAGAGTCGCGGTTTTATTTGCAGTTGCTCTCAAAAGCTGGGCAGCTGAAACAGCTTaGCGGCCTTGCTGTAATGAA +
Preference number: 5 (lower is better)
Translates to: LILSRRVAVLFAVALKSWAAETA*RPCCNE
Trigger: TTCATTACAGCAAGGCCGCAAAGCTGTTTCAGCTGC...CCAGCTTTTGAGAGCAACTGCAAATAAAACCGCGACTCTTCTGGAAAGAATCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CAA 90 bp AATCCCAAACAGCTGGGTGTATGTCTCGTGTTCCCAATGACCTTAGCGCTTTCAATCACTTCTTCTCGATaGAGACTAGGAGAAGCATCA +
Preference number: 5 (lower is better)
Translates to: NPKQLGVCLVFPMTLALSITSSR*RLGEAS
Trigger: TGATGCTTCTCCTAGTCTCAATCGAGAAGAAGTGAT...TGAAAGCGCTAAGGTCATTGGGAACACGAGACATACACCCAGCTGTTTGGGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CAA 90 bp AGCATCTTTCAGCAGCTGAAACAGCTTTGCGGCCTTGCTGTAATGAAGATCTGCATCACTTCTTCTCGATaGAGACTAGGAGAAGCATCA +
Preference number: 5 (lower is better)
Translates to: SIFQQLKQLCGLAVMKICITSSR*RLGEAS
Trigger: TGATGCTTCTCCTAGTCTCAATCGAGAAGAAGTGAT...GCAGATCTTCATTACAGCAAGGCCGCAAAGCTGTTTCAGCTGCTGAAAGATGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CAA 90 bp CACCCGGTGTTGTTTCCTAAGGTGTTCATCACCAACCTGATTCCTCAGACAGCTATGTGCTTGTTGGTTTaGAGAATTGTGTCATCTTCG +
Preference number: 5 (lower is better)
Translates to: HPVLFPKVFITNLIPQTAMCLLV*RIVSSS
Trigger: CGAAGATGACACAATTCTCAAAACCAACAAGCACAT...AGCTGTCTGAGGAATCAGGTTGGTGATGAACACCTTAGGAAACAACACCGGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CAA 90 bp AAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCTGTGTTTCCAAACCGGCTCCGTGTaGAAGGCACTGACAGCGTGT +
Preference number: 5 (lower is better)
Translates to: KPQNSTVICLSLKITLCFQTGSV*KALTAC
Trigger: ACACGCTGTCAGTGCCTTCAACACGGAGCCGGTTTG...GAAACACAGAGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
CDS-3UTR CAA 90 bp GTGGAAGCTTTAAGTTTGATTCTGATGTTAGCACTTCAAGTGAAGAAGCCACAGATCAGGTTTTGTTCTTaGGGGGCTGAGGCCACATGC +
Preference number: 5 (lower is better)
Translates to: VEALSLILMLALQVKKPQIRFCS*GAEATC
Trigger: GCATGTGGCCTCAGCCCCCAAAGAACAAAACCTGAT...CTGTGGCTTCTTCACTTGAAGTGCTAACATCAGAATCAAACTTAAAGCTTCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356792.9
CDS-3UTR CAA 90 bp TCAAATATACTGAGGAGTTTCATCACTTCTTCTCGATTGAGACTAGGAGAAGCAATCAACGGCTCCGTGTaGAAGGCACTGACAGCGTGT +
Preference number: 5 (lower is better)
Translates to: SNILRSFITSSRLRLGEAINGSV*KALTAC
Trigger: ACACGCTGTCAGTGCCTTCAACACGGAGCCGTTGAT...TGCTTCTCCTAGTCTCAATCGAGAAGAAGTGATGAAACTCCTCAGTATATTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481600.5
CDS-3UTR CAA 90 bp CCCAAACAGCTGGGTGTATGTCTCGTGTTCCCAATGACCTTAGCGCTTTCAAATAGCACATTAATTGGTTaGTTGTTATCCCTGAGACGT +
Preference number: 5 (lower is better)
Translates to: PKQLGVCLVFPMTLALSNSTLIG*LLSLRR
Trigger: ACGTCTCAGGGATAACAACAAACCAATTAATGTGCT...ATTTGAAAGCGCTAAGGTCATTGGGAACACGAGACATACACCCAGCTGTTTGGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000419769.6
CDS-3UTR CAA 90 bp TTCATCATCATGTTGCAAGCAACCTTGTACAAGAGAATGGCTACCGGCATTGTGACAAGCTCTGGCACATaGCATATCAAGTTGTCCAAC +
Preference number: 5 (lower is better)
Translates to: FIIMLQATLYKRMATGIVTSSGT*HIKLSN
Trigger: GTTGGACAACTTGATATGCAATGTGCCAGAGCTTGT...CACAATGCCGGTAGCCATTCTCTTGTACAAGGTTGCTTGCAACATGATGATGAA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481600.5
ENST00000530795.1
CDS-3UTR CAA 90 bp TGGAATGCGTGCTCAGTTCTCACCATTATATCAAGAGCCCCAGATAGTGTTTTCATGTTGCAAGCAACCTaGTACAAGAGAATGGCTACC +
Preference number: 5 (lower is better)
Translates to: WNACSVLTIISRAPDSVFMLQAT*YKRMAT
Trigger: GGTAGCCATTCTCTTGTACAAGGTTGCTTGCAACAT...GAAAACACTATCTGGGGCTCTTGATATAATGGTGAGAACTGAGCACGCATTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CAA 90 bp CATGTTGCAAGCAACCTTGTACAAGAGAATGGCTACCGGCATTGTGAATGGATTATGTTGCAAGCAACCTaGTACAAGAGAATGGCTACC +
Preference number: 5 (lower is better)
Translates to: HVASNLVQENGYRHCEWIMLQAT*YKRMAT
Trigger: GGTAGCCATTCTCTTGTACAAGGTTGCTTGCAACAT...AATCCATTCACAATGCCGGTAGCCATTCTCTTGTACAAGGTTGCTTGCAACATG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000481600.5
ENST00000530795.1
CDS-3UTR CAA 90 bp GGCGTCACCACTCTTAGGCTGGCCAAATTCTTCTATAAGCTCCTTCTGGATAAGAGTTCTCCAACAGACTaGATTATAGCTACTGCTTTG +
Preference number: 5 (lower is better)
Translates to: GVTTLRLAKFFYKLLLDKSSPTD*IIATAL
Trigger: CAAAGCAGTAGCTATAATCAAGTCTGTTGGAGAACT...CTTATCCAGAAGGAGCTTATAGAAGAATTTGGCCAGCCTAAGAGTGGTGACGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CAA 90 bp GTGGAAGCTTTAAGTTTGATTCTGATGTTAGCACTTCAAGTGAAGAAGCCACAGCATATTTTAACGGGATaGGAGTGCTGGGGTCAGCTG +
Preference number: 5 (lower is better)
Translates to: VEALSLILMLALQVKKPQHILTG*ECWGQL
Trigger: CAGCTGACCCCAGCACTCCAATCCCGTTAAAATATG...CTGTGGCTTCTTCACTTGAAGTGCTAACATCAGAATCAAACTTAAAGCTTCCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR CAA 90 bp GTGGAAGCTTTAAGTTTGATTCTGATGTTAGCACTTCAAGTGAAGAAGCCACAGCCTCGGGACCCCCTCTaGAGGATTCATCTTCATATT +
Preference number: 5 (lower is better)
Translates to: VEALSLILMLALQVKKPQPRDPL*RIHLHI
Trigger: AATATGAAGATGAATCCTCAAGAGGGGGTCCCGAGG...CTGTGGCTTCTTCACTTGAAGTGCTAACATCAGAATCAAACTTAAAGCTTCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR CAA 90 bp AGCGGCGTCACCACTCTTAGGCTGGCCAAATTCTTCTATAAGCTCCTTCTGGATCTGGTCTTCTTTTGTTaGGTAATGAAACTCTTCAAG +
Preference number: 5 (lower is better)
Translates to: SGVTTLRLAKFFYKLLLDLVFFC*VMKLFK
Trigger: CTTGAAGAGTTTCATTACCAAACAAAAGAAGACCAG...ATCCAGAAGGAGCTTATAGAAGAATTTGGCCAGCCTAAGAGTGGTGACGCCGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CAA 90 bp TTCTCACCATTATATCAAGAGCCCCAGATAGTGTTTTCAACTTTCCAACATTGCTGCCCATGCAAATCCTaGGCAACTGGACTCTCTGTG +
Preference number: 5 (lower is better)
Translates to: FSPLYQEPQIVFSTFQHCCPCKS*ATGLSV
Trigger: CACAGAGAGTCCAGTTGCCAAGGATTTGCATGGGCA...GCAATGTTGGAAAGTTGAAAACACTATCTGGGGCTCTTGATATAATGGTGAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
CDS-3UTR CAA 90 bp AGCATCTTTCAGCAGCTGAAACAGCTTTGCGGCCTTGCTGTAATGAAGATCTGCTGGTGGCATCCTCAATaGATTCAAAGTTGTGAATTC +
Preference number: 5 (lower is better)
Translates to: SIFQQLKQLCGLAVMKICWWHPQ*IQSCEF
Trigger: GAATTCACAACTTTGAATCAATTGAGGATGCCACCA...GCAGATCTTCATTACAGCAAGGCCGCAAAGCTGTTTCAGCTGCTGAAAGATGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS CCA 90 bp TGCCTTTATCCTCGGCCTCAGATTATTCTCAGAAATACAGGCATTTaGGCACCAGGATTCATGTACAATCCTGCTGGCACTAGATTATTT +
Preference number: 5 (lower is better)
Translates to: CLYPRPQIILRNTGI*APGFMYNPAGTRLF
Trigger: AAATAATCTAGTGCCAGCAGGATTGTACATGAATCCTGGTGCCCAAATGCCTGTATTTCTGAGAATAATCTGAGGCCGAGGATAAAGGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525091.5
CDS-3UTR CAA 90 bp CAAGTGAAGAAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCTCTCTCGTAACCAGTaGGCAGGTGGGAGTTTCAAG +
Preference number: 5 (lower is better)
Translates to: QVKKPQNSTVICLSLKITLSRNQ*AGGSFK
Trigger: CTTGAAACTCCCACCTGCCAACTGGTTACGAGAGAG...AGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTTCTTCACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR CAA 90 bp CCCGTGTTACATAATAAAAGGGCGGCATTGGTGGCATCCTCAATTGATTCAAAGATGCCATGCCAAAGCTaGAAAATGGCTTGCTTTTCT +
Preference number: 5 (lower is better)
Translates to: PVLHNKRAALVASSIDSKMPCQS*KMACFS
Trigger: AGAAAAGCAAGCCATTTTCAAGCTTTGGCATGGCAT...CTTTGAATCAATTGAGGATGCCACCAATGCCGCCCTTTTATTATGTAACACGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CAA 90 bp TATGTTGCCAAGAGCCAGGGATCATTCCAGATTGACTGGAATAATTGCCCTTCTGGAAAGAATTGCCTTTaGATACCAGTGCTCTTTGCT +
Preference number: 5 (lower is better)
Translates to: YVAKSQGSFQIDWNNCPSGKNCL*IPVLFA
Trigger: AGCAAAGAGCACTGGTATCAAAAGGCAATTCTTTCC...AGAAGGGCAATTATTCCAGTCAATCTGGAATGATCCCTGGCTCTTGGCAACATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
CDS-3UTR CAA 90 bp AATCCCAAACAGCTGGGTGTATGTCTCGTGTTCCCAATGACCTTAGCGCTTTCAAAAACTTGGAAAGAATaGCCTTTTGATACCAGTGCT +
Preference number: 5 (lower is better)
Translates to: NPKQLGVCLVFPMTLALSKTWKE*PFDTSA
Trigger: AGCACTGGTATCAAAAGGCAATTCTTTCCAAGTTTT...TGAAAGCGCTAAGGTCATTGGGAACACGAGACATACACCCAGCTGTTTGGGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CAA 90 bp AAACAACAGCACTTCGGAAAGCATATTGGTGCAGAGGCAGCAATAAGTATCATGATGTTGCAAGCAACCTaGTACAAGAGAATGGCTACC +
Preference number: 5 (lower is better)
Translates to: KQQHFGKHIGAEAAISIMMLQAT*YKRMAT
Trigger: GGTAGCCATTCTCTTGTACAAGGTTGCTTGCAACAT...CATGATACTTATTGCTGCCTCTGCACCAATATGCTTTCCGAAGTGCTGTTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
CDS-3UTR CAA 90 bp TTCTCACCATTATATCAAGAGCCCCAGATAGTGTTTTCAACTTTCCAACATTGCCATATTTTAACGGGATaGGAGTGCTGGGGTCAGCTG +
Preference number: 5 (lower is better)
Translates to: FSPLYQEPQIVFSTFQHCHILTG*ECWGQL
Trigger: CAGCTGACCCCAGCACTCCAATCCCGTTAAAATATG...GCAATGTTGGAAAGTTGAAAACACTATCTGGGGCTCTTGATATAATGGTGAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CAA 90 bp ATAACGTTGATTCTTTCCAGAAGAGTCGCGGTTTTATTTGCAGTTGCTCTCAAACCTCGGGACCCCCTCTaGAGGATTCATCTTCATATT +
Preference number: 5 (lower is better)
Translates to: ITLILSRRVAVLFAVALKPRDPL*RIHLHI
Trigger: AATATGAAGATGAATCCTCAAGAGGGGGTCCCGAGG...TTTGAGAGCAACTGCAAATAAAACCGCGACTCTTCTGGAAAGAATCAACGTTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CAA 90 bp ACTGGACTCTCTGTGAAGGCTATGCAGGATCTCCTGGTCTTCTTTTGTTTGGTAAAGTTTCATTTTATGTaGCCAAGAGCCAGGGATCAT +
Preference number: 5 (lower is better)
Translates to: TGLSVKAMQDLLVFFCLVKFHFM*PRARDH
Trigger: ATGATCCCTGGCTCTTGGCAACATAAAATGAAACTT...TACCAAACAAAAGAAGACCAGGAGATCCTGCATAGCCTTCACAGAGAGTCCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
CDS-3UTR CAA 90 bp CAAGTGAAGAAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTTGCCCATGCAAATCCTaGGCAACTGGACTCTCTGTG +
Preference number: 5 (lower is better)
Translates to: QVKKPQNSTVICLSLKITCPCKS*ATGLSV
Trigger: CACAGAGAGTCCAGTTGCCAAGGATTTGCATGGGCA...AGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTTCTTCACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR CAA 90 bp GATCTCCTGGTCTTCTTTTGTTTGGTAATGAAACTCTTCAAGGTGTGCTGCTCTAATAAAAGGGCGGCATaGGTGGCATCCTCAATTGAT +
Preference number: 5 (lower is better)
Translates to: DLLVFFCLVMKLFKVCCSNKRAA*VASSID
Trigger: ATCAATTGAGGATGCCACCAATGCCGCCCTTTTATT...AGAGCAGCACACCTTGAAGAGTTTCATTACCAAACAAAAGAAGACCAGGAGATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000481600.5
CDS-3UTR CAA 90 bp CAAGTGAAGAAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTTGCCAGCACCCGGTGTaGTTTCCTAAGGTGTTCATC +
Preference number: 5 (lower is better)
Translates to: QVKKPQNSTVICLSLKITCQHPV*FPKVFI
Trigger: GATGAACACCTTAGGAAACAACACCGGGTGCTGGCA...AGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTTCTTCACTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR CAA 90 bp TCAGTTCTCACCATTATATCAAGAGCCCCAGATAGTGTTTTCAACTTTCCAACAGCAGCTGAAACAGCTTaGCGGCCTTGCTGTAATGAA +
Preference number: 5 (lower is better)
Translates to: SVLTIISRAPDSVFNFPTAAETA*RPCCNE
Trigger: TTCATTACAGCAAGGCCGCAAAGCTGTTTCAGCTGC...TGTTGGAAAGTTGAAAACACTATCTGGGGCTCTTGATATAATGGTGAGAACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CAA 90 bp GACACTGAATCCACATCGCAGTATTTTAGGGACTTCATCATGGCCTCACTGACTATGTGCTTGTTGGTTTaGAGAATTGTGTCATCTTCG +
Preference number: 5 (lower is better)
Translates to: DTESTSQYFRDFIMASLTMCLLV*RIVSSS
Trigger: CGAAGATGACACAATTCTCAAAACCAACAAGCACAT...AGTCAGTGAGGCCATGATGAAGTCCCTAAAATACTGCGATGTGGATTCAGTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CAA 90 bp ATGTTGCAAGCAACCTTGTACAAGAGAATGGCTACCGGCATTGTGAATGGATTTAGGTGGACGATAACGTaGATTCTTTCCAGAAGAGTC +
Preference number: 5 (lower is better)
Translates to: MLQATLYKRMATGIVNGFRWTIT*ILSRRV
Trigger: GACTCTTCTGGAAAGAATCAACGTTATCGTCCACCT...AAATCCATTCACAATGCCGGTAGCCATTCTCTTGTACAAGGTTGCTTGCAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481600.5
CDS-3UTR CAA 90 bp CATCATCATGTTGCAAGCAACCTTGTACAAGAGAATGGCTACCGGCATTGTGAACTGTGCTCCCCGTCATaGAATAAAGTAATCAGGTTT +
Preference number: 5 (lower is better)
Translates to: HHHVASNLVQENGYRHCELCSPS*NKVIRF
Trigger: AAACCTGATTACTTTATTCAATGACGGGGAGCACAG...TTCACAATGCCGGTAGCCATTCTCTTGTACAAGGTTGCTTGCAACATGATGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000481600.5
ENST00000530795.1
CDS GCA 90 bp ACAAGCAACAAATCCTTCACGGTAACTACTTCAGGCTTCACTAAGTaGTTCTTAGTTATTTTTCCCCCACTGTGGGTCTTACTAGGTCTT +
Preference number: 5 (lower is better)
Translates to: TSNKSFTVTTSGFTK*FLVIFPPLWVLLGL
Trigger: AAGACCTAGTAAGACCCACAGTGGGGGAAAAATAACTAAGAAGCACTTAGTGAAGCCTGAAGTAGTTACCGTGAAGGATTTGTTGCTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000368812.1
ENST00000527655.5
CDS-3UTR CAA 90 bp CAAGTGAAGAAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCCAAATATGGGCATGTaGGAGCCGACCAACATATGG +
Preference number: 5 (lower is better)
Translates to: QVKKPQNSTVICLSLKITPNMGM*EPTNIW
Trigger: CCATATGTTGGTCGGCTCCAACATGCCCATATTTGG...AGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTTCTTCACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR CAA 90 bp GTGGAAGCTTTAAGTTTGATTCTGATGTTAGCACTTCAAGTGAAGAAGCCACAGACAAGCTCTGGCACATaGCATATCAAGTTGTCCAAC +
Preference number: 5 (lower is better)
Translates to: VEALSLILMLALQVKKPQTSSGT*HIKLSN
Trigger: GTTGGACAACTTGATATGCAATGTGCCAGAGCTTGT...CTGTGGCTTCTTCACTTGAAGTGCTAACATCAGAATCAAACTTAAAGCTTCCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR CAA 90 bp ACACATCACAAGCTCTGGCACATTGCATATCAAGTTGTCCAACCAATAGTCAATACAAGCTCTGGCACATaGCATATCAAGTTGTCCAAC +
Preference number: 5 (lower is better)
Translates to: THHKLWHIAYQVVQPIVNTSSGT*HIKLSN
Trigger: GTTGGACAACTTGATATGCAATGTGCCAGAGCTTGT...ATTGACTATTGGTTGGACAACTTGATATGCAATGTGCCAGAGCTTGTGATGTGT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481600.5
CDS-3UTR CAA 90 bp AAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCTGTGTTTCCATATTTTAACGGGATaGGAGTGCTGGGGTCAGCTG +
Preference number: 5 (lower is better)
Translates to: KPQNSTVICLSLKITLCFHILTG*ECWGQL
Trigger: CAGCTGACCCCAGCACTCCAATCCCGTTAAAATATG...GAAACACAGAGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
CDS-3UTR CAA 90 bp CAAGTGAAGAAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCCTCGGGACCCCCTCTaGAGGATTCATCTTCATATT +
Preference number: 5 (lower is better)
Translates to: QVKKPQNSTVICLSLKITPRDPL*RIHLHI
Trigger: AATATGAAGATGAATCCTCAAGAGGGGGTCCCGAGG...AGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTTCTTCACTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR CAA 90 bp GTGGAAGCTTTAAGTTTGATTCTGATGTTAGCACTTCAAGTGAAGAAGCCACAGGTGCTGCTCTATTATTaGCATTCTGGGCCAGCATTA +
Preference number: 5 (lower is better)
Translates to: VEALSLILMLALQVKKPQVLLYY*HSGPAL
Trigger: TAATGCTGGCCCAGAATGCAAATAATAGAGCAGCAC...CTGTGGCTTCTTCACTTGAAGTGCTAACATCAGAATCAAACTTAAAGCTTCCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR CAA 90 bp CAAGTGAAGAAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTGCAGCAGACACAGATTaGCTCACTAGTCTCTCACTC +
Preference number: 5 (lower is better)
Translates to: QVKKPQNSTVICLSLKITAADTD*LTSLSL
Trigger: GAGTGAGAGACTAGTGAGCAAATCTGTGTCTGCTGC...AGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTTCTTCACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR CAA 90 bp AAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCTGTGTTTCGCAGCAGACACAGATTaGCTCACTAGTCTCTCACTC +
Preference number: 5 (lower is better)
Translates to: KPQNSTVICLSLKITLCFAADTD*LTSLSL
Trigger: GAGTGAGAGACTAGTGAGCAAATCTGTGTCTGCTGC...GAAACACAGAGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
CDS-3UTR CAA 90 bp AAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCTGTGTTTCGCCTGTGATGGATGGTaGCAGCTCGATACTGACAAA +
Preference number: 5 (lower is better)
Translates to: KPQNSTVICLSLKITLCFACDGW*QLDTDK
Trigger: TTTGTCAGTATCGAGCTGCAACCATCCATCACAGGC...GAAACACAGAGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
CDS-3UTR CAA 90 bp CAAGTGAAGAAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTGCAGCTGAAACAGCTTaGCGGCCTTGCTGTAATGAA +
Preference number: 5 (lower is better)
Translates to: QVKKPQNSTVICLSLKITAAETA*RPCCNE
Trigger: TTCATTACAGCAAGGCCGCAAAGCTGTTTCAGCTGC...AGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTTCTTCACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR CAA 90 bp AAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCTGTGTTTCGCAGCTGAAACAGCTTaGCGGCCTTGCTGTAATGAA +
Preference number: 5 (lower is better)
Translates to: KPQNSTVICLSLKITLCFAAETA*RPCCNE
Trigger: TTCATTACAGCAAGGCCGCAAAGCTGTTTCAGCTGC...GAAACACAGAGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
CDS-3UTR CAA 90 bp GTGGAAGCTTTAAGTTTGATTCTGATGTTAGCACTTCAAGTGAAGAAGCCACAGGAGTCGCGGTTTTATTaGCAGTTGCTCTCAAAAGCT +
Preference number: 5 (lower is better)
Translates to: VEALSLILMLALQVKKPQESRFY*QLLSKA
Trigger: AGCTTTTGAGAGCAACTGCAAATAAAACCGCGACTC...CTGTGGCTTCTTCACTTGAAGTGCTAACATCAGAATCAAACTTAAAGCTTCCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR CAA 90 bp CCCCAGATAGTGTTTTCAACTTTCCAACATTGCTATTCTGACTGGTCATCTGAAAGGTGGACGATAACGTaGATTCTTTCCAGAAGAGTC +
Preference number: 5 (lower is better)
Translates to: PQIVFSTFQHCYSDWSSERWTIT*ILSRRV
Trigger: GACTCTTCTGGAAAGAATCAACGTTATCGTCCACCT...TTCAGATGACCAGTCAGAATAGCAATGTTGGAAAGTTGAAAACACTATCTGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CAA 90 bp GTGGAAGCTTTAAGTTTGATTCTGATGTTAGCACTTCAAGTGAAGAAGCCACAGCACAACAGCTCGTCTTaGAAAAATCCTGCACTGAAG +
Preference number: 5 (lower is better)
Translates to: VEALSLILMLALQVKKPQHNSSS*KNPALK
Trigger: CTTCAGTGCAGGATTTTTCAAAGACGAGCTGTTGTG...CTGTGGCTTCTTCACTTGAAGTGCTAACATCAGAATCAAACTTAAAGCTTCCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR CAA 90 bp TTCTTTCCAGAAGAGTCGCGGTTTTATTTGCAGTTGCTCTCAAAAGCTGGGAGTTCATCTTCGATGTTATaGCTTTGGCCTAACAAACTG +
Preference number: 5 (lower is better)
Translates to: FFPEESRFYLQLLSKAGSSSSML*LWPNKL
Trigger: CAGTTTGTTAGGCCAAAGCAATAACATCGAAGATGA...ACTCCCAGCTTTTGAGAGCAACTGCAAATAAAACCGCGACTCTTCTGGAAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525358.1
CDS GCA 90 bp CCTAACAAACTGCTACTGCTAGAATTTCTAGCAGGTCAATGCCAATaGAGTTGTCATATGATGATGAAATGCCTGCATCACCTTGTTTTC +
Preference number: 5 (lower is better)
Translates to: PNKLLLLEFLAGQCQ*SCHMMMKCLHHLVF
Trigger: GAAAACAAGGTGATGCAGGCATTTCATCATCATATGACAACTGCATTGGCATTGACCTGCTAGAAATTCTAGCAGTAGCAGTTTGTTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525358.1
CDS-3UTR CAA 90 bp GTGGAAGCTTTAAGTTTGATTCTGATGTTAGCACTTCAAGTGAAGAAGCCACAGTTGCTTTTCTTGCTGTaGCCAAGAATGGTAGTTCCT +
Preference number: 5 (lower is better)
Translates to: VEALSLILMLALQVKKPQLLFLL*PRMVVP
Trigger: AGGAACTACCATTCTTGGCAACAGCAAGAAAAGCAA...CTGTGGCTTCTTCACTTGAAGTGCTAACATCAGAATCAAACTTAAAGCTTCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR CAA 90 bp CCCCAGATAGTGTTTTCAACTTTCCAACATTGCTATTCTGACTGGTCATCTGAAATGCCATGCCAAAGCTaGAAAATGGCTTGCTTTTCT +
Preference number: 5 (lower is better)
Translates to: PQIVFSTFQHCYSDWSSEMPCQS*KMACFS
Trigger: AGAAAAGCAAGCCATTTTCAAGCTTTGGCATGGCAT...TTCAGATGACCAGTCAGAATAGCAATGTTGGAAAGTTGAAAACACTATCTGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CAA 90 bp GTGGAAGCTTTAAGTTTGATTCTGATGTTAGCACTTCAAGTGAAGAAGCCACAGGGAAAGAATTGCCTTTaGATACCAGTGCTCTTTGCT +
Preference number: 5 (lower is better)
Translates to: VEALSLILMLALQVKKPQGKNCL*IPVLFA
Trigger: AGCAAAGAGCACTGGTATCAAAAGGCAATTCTTTCC...CTGTGGCTTCTTCACTTGAAGTGCTAACATCAGAATCAAACTTAAAGCTTCCAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR CAA 90 bp TGGAATGCGTGCTCAGTTCTCACCATTATATCAAGAGCCCCAGATAGTGTTTTCAAAACTTGGAAAGAATaGCCTTTTGATACCAGTGCT +
Preference number: 5 (lower is better)
Translates to: WNACSVLTIISRAPDSVFKTWKE*PFDTSA
Trigger: AGCACTGGTATCAAAAGGCAATTCTTTCCAAGTTTT...GAAAACACTATCTGGGGCTCTTGATATAATGGTGAGAACTGAGCACGCATTCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CAA 90 bp TTCTCACCATTATATCAAGAGCCCCAGATAGTGTTTTCAACTTTCCAACATTGCGGCGGAAGCAATAATTaGAGGATGCCTACTTTTGTC +
Preference number: 5 (lower is better)
Translates to: FSPLYQEPQIVFSTFQHCGGSNN*RMPTFV
Trigger: GACAAAAGTAGGCATCCTCAAATTATTGCTTCCGCC...GCAATGTTGGAAAGTTGAAAACACTATCTGGGGCTCTTGATATAATGGTGAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CAA 90 bp AGTAGTGAGGTCATAGAGCTTCACTATATCGCTGCCACTTGCTTTAAAGAGCCAATTATAGCTACTGCTTaGCTATCATCTGATGGATCA +
Preference number: 5 (lower is better)
Translates to: SSEVIELHYIAATCFKEPIIATA*LSSDGS
Trigger: TGATCCATCAGATGATAGCAAAGCAGTAGCTATAAT...TGGCTCTTTAAAGCAAGTGGCAGCGATATAGTGAAGCTCTATGACCTCACTACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481600.5
CDS-3UTR CAA 90 bp AAAGGGCGGCATTGGTGGCATCCTCAATTGATTCAAAGTTGTGAATTCCCTTTTAGTTCTCCAACAGACTaGATTATAGCTACTGCTTTG +
Preference number: 5 (lower is better)
Translates to: KGRHWWHPQLIQSCEFPFSSPTD*IIATAL
Trigger: CAAAGCAGTAGCTATAATCAAGTCTGTTGGAGAACT...AAAAGGGAATTCACAACTTTGAATCAATTGAGGATGCCACCAATGCCGCCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CAA 90 bp CATCATCATGTTGCAAGCAACCTTGTACAAGAGAATGGCTACCGGCATTGTGAACTGGTCTTCTTTTGTTaGGTAATGAAACTCTTCAAG +
Preference number: 5 (lower is better)
Translates to: HHHVASNLVQENGYRHCELVFFC*VMKLFK
Trigger: CTTGAAGAGTTTCATTACCAAACAAAAGAAGACCAG...TTCACAATGCCGGTAGCCATTCTCTTGTACAAGGTTGCTTGCAACATGATGATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481600.5
CDS-3UTR CAA 90 bp TCAGTTCTCACCATTATATCAAGAGCCCCAGATAGTGTTTTCAACTTTCCAACAGAGTCGCGGTTTTATTaGCAGTTGCTCTCAAAAGCT +
Preference number: 5 (lower is better)
Translates to: SVLTIISRAPDSVFNFPTESRFY*QLLSKA
Trigger: AGCTTTTGAGAGCAACTGCAAATAAAACCGCGACTC...TGTTGGAAAGTTGAAAACACTATCTGGGGCTCTTGATATAATGGTGAGAACTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CAA 90 bp GTGTCATCTTCGATGTTATTGCTTTGGCCTAACAAACTGCTACTGCTAGAATTTGAGTCGCGGTTTTATTaGCAGTTGCTCTCAAAAGCT +
Preference number: 5 (lower is better)
Translates to: VSSSMLLLWPNKLLLLEFESRFY*QLLSKA
Trigger: AGCTTTTGAGAGCAACTGCAAATAAAACCGCGACTC...AAATTCTAGCAGTAGCAGTTTGTTAGGCCAAAGCAATAACATCGAAGATGACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525358.1
CDS-3UTR CAA 90 bp TCAAATATACTGAGGAGTTTCATCACTTCTTCTCGATTGAGACTAGGAGAAGCAAGGTGGACGATAACGTaGATTCTTTCCAGAAGAGTC +
Preference number: 5 (lower is better)
Translates to: SNILRSFITSSRLRLGEARWTIT*ILSRRV
Trigger: GACTCTTCTGGAAAGAATCAACGTTATCGTCCACCT...TGCTTCTCCTAGTCTCAATCGAGAAGAAGTGATGAAACTCCTCAGTATATTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CAA 90 bp ATAACGTTGATTCTTTCCAGAAGAGTCGCGGTTTTATTTGCAGTTGCTCTCAAAAGGTGGACGATAACGTaGATTCTTTCCAGAAGAGTC +
Preference number: 5 (lower is better)
Translates to: ITLILSRRVAVLFAVALKRWTIT*ILSRRV
Trigger: GACTCTTCTGGAAAGAATCAACGTTATCGTCCACCT...TTTGAGAGCAACTGCAAATAAAACCGCGACTCTTCTGGAAAGAATCAACGTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
ENST00000525358.1
CDS-3UTR CAA 90 bp GTGGAAGCTTTAAGTTTGATTCTGATGTTAGCACTTCAAGTGAAGAAGCCACAGCTGTGCTCCCCGTCATaGAATAAAGTAATCAGGTTT +
Preference number: 5 (lower is better)
Translates to: VEALSLILMLALQVKKPQLCSPS*NKVIRF
Trigger: AAACCTGATTACTTTATTCAATGACGGGGAGCACAG...CTGTGGCTTCTTCACTTGAAGTGCTAACATCAGAATCAAACTTAAAGCTTCCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356792.9
CDS-3UTR CAA 90 bp GTACAAGAGAATGGCTACCGGCATTGTGAATGGATTTTGGTATTTGTCTTCAGTCTGTGCTCCCCGTCATaGAATAAAGTAATCAGGTTT +
Preference number: 5 (lower is better)
Translates to: VQENGYRHCEWILVFVFSLCSPS*NKVIRF
Trigger: AAACCTGATTACTTTATTCAATGACGGGGAGCACAG...ACTGAAGACAAATACCAAAATCCATTCACAATGCCGGTAGCCATTCTCTTGTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000481600.5
ENST00000530795.1
CDS-3UTR CAA 90 bp TTCACAAAGAGTAGTGAGGTCATAGAGCTTCACTATATCGCTGCCACTTGCTTTATATTTTTGAGCTCCTaGATCCTCAGTCTCTCTTTC +
Preference number: 5 (lower is better)
Translates to: FTKSSEVIELHYIAATCFIFLSS*ILSLSF
Trigger: GAAAGAGAGACTGAGGATCAAGGAGCTCAAAAATAT...AAAGCAAGTGGCAGCGATATAGTGAAGCTCTATGACCTCACTACTCTTTGTGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000530795.1
CDS-3UTR CAA 90 bp AAGCTGGGAGTAAATGTGCTTGTTGGTTTTGAGAATTGTGTCATCTTCGATGTTGGAAAGAATTGCCTTTaGATACCAGTGCTCTTTGCT +
Preference number: 5 (lower is better)
Translates to: KLGVNVLVGFENCVIFDVGKNCL*IPVLFA
Trigger: AGCAAAGAGCACTGGTATCAAAAGGCAATTCTTTCC...AACATCGAAGATGACACAATTCTCAAAACCAACAAGCACATTTACTCCCAGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CAA 90 bp AAAGGGCGGCATTGGTGGCATCCTCAATTGATTCAAAGTTGTGAATTCCCTTTTACATTAATTGGTTTGTaGTTATCCCTGAGACGTAAG +
Preference number: 5 (lower is better)
Translates to: KGRHWWHPQLIQSCEFPFTLIGL*LSLRRK
Trigger: CTTACGTCTCAGGGATAACAACAAACCAATTAATGT...AAAAGGGAATTCACAACTTTGAATCAATTGAGGATGCCACCAATGCCGCCCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368815.6
ENST00000419769.6
CDS-3UTR CAA 90 bp AGTTTCTTCACAAAGAGTAGTGAGGTCATAGAGCTTCACTATATCGCTGCCACTACATTAATTGGTTTGTaGTTATCCCTGAGACGTAAG +
Preference number: 5 (lower is better)
Translates to: SFFTKSSEVIELHYIAATTLIGL*LSLRRK
Trigger: CTTACGTCTCAGGGATAACAACAAACCAATTAATGT...AGTGGCAGCGATATAGTGAAGCTCTATGACCTCACTACTCTTTGTGAAGAAACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530795.1
CDS-3UTR CAA 90 bp GTGGAAGCTTTAAGTTTGATTCTGATGTTAGCACTTCAAGTGAAGAAGCCACAGAGTTCTCCAACAGACTaGATTATAGCTACTGCTTTG +
Preference number: 5 (lower is better)
Translates to: VEALSLILMLALQVKKPQSSPTD*IIATAL
Trigger: CAAAGCAGTAGCTATAATCAAGTCTGTTGGAGAACT...CTGTGGCTTCTTCACTTGAAGTGCTAACATCAGAATCAAACTTAAAGCTTCCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR CAA 90 bp GTGGAAGCTTTAAGTTTGATTCTGATGTTAGCACTTCAAGTGAAGAAGCCACAGAAGTTTCATTTTATGTaGCCAAGAGCCAGGGATCAT +
Preference number: 5 (lower is better)
Translates to: VEALSLILMLALQVKKPQKFHFM*PRARDH
Trigger: ATGATCCCTGGCTCTTGGCAACATAAAATGAAACTT...CTGTGGCTTCTTCACTTGAAGTGCTAACATCAGAATCAAACTTAAAGCTTCCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR CAA 90 bp AAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCTGTGTTTCGTGCTGCTCTATTATTaGCATTCTGGGCCAGCATTA +
Preference number: 5 (lower is better)
Translates to: KPQNSTVICLSLKITLCFVLLYY*HSGPAL
Trigger: TAATGCTGGCCCAGAATGCAAATAATAGAGCAGCAC...GAAACACAGAGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
CDS-3UTR CAA 90 bp CAAGTGAAGAAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTAATAAAAGGGCGGCATaGGTGGCATCCTCAATTGAT +
Preference number: 5 (lower is better)
Translates to: QVKKPQNSTVICLSLKITNKRAA*VASSID
Trigger: ATCAATTGAGGATGCCACCAATGCCGCCCTTTTATT...AGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTTCTTCACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR CAA 90 bp AAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCTGTGTTTCAATAAAAGGGCGGCATaGGTGGCATCCTCAATTGAT +
Preference number: 5 (lower is better)
Translates to: KPQNSTVICLSLKITLCFNKRAA*VASSID
Trigger: ATCAATTGAGGATGCCACCAATGCCGCCCTTTTATT...GAAACACAGAGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
CDS-3UTR CAA 90 bp GTGGAAGCTTTAAGTTTGATTCTGATGTTAGCACTTCAAGTGAAGAAGCCACAGATGTGCTTGTTGGTTTaGAGAATTGTGTCATCTTCG +
Preference number: 5 (lower is better)
Translates to: VEALSLILMLALQVKKPQMCLLV*RIVSSS
Trigger: CGAAGATGACACAATTCTCAAAACCAACAAGCACAT...CTGTGGCTTCTTCACTTGAAGTGCTAACATCAGAATCAAACTTAAAGCTTCCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR CAA 90 bp AAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCTGTGTTTCCGGTTTTATTTGCAGTaGCTCTCAAAAGCTGGGAGT +
Preference number: 5 (lower is better)
Translates to: KPQNSTVICLSLKITLCFRFYLQ*LSKAGS
Trigger: ACTCCCAGCTTTTGAGAGCAACTGCAAATAAAACCG...GAAACACAGAGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
CDS-3UTR CAA 90 bp CAAGTGAAGAAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTGAGTCGCGGTTTTATTaGCAGTTGCTCTCAAAAGCT +
Preference number: 5 (lower is better)
Translates to: QVKKPQNSTVICLSLKITESRFY*QLLSKA
Trigger: AGCTTTTGAGAGCAACTGCAAATAAAACCGCGACTC...AGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTTCTTCACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR CAA 90 bp CAAGTGAAGAAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTAGGTGGACGATAACGTaGATTCTTTCCAGAAGAGTC +
Preference number: 5 (lower is better)
Translates to: QVKKPQNSTVICLSLKITRWTIT*ILSRRV
Trigger: GACTCTTCTGGAAAGAATCAACGTTATCGTCCACCT...AGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTTCTTCACTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR CAA 90 bp AAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCTGTGTTTCATGCCATGCCAAAGCTaGAAAATGGCTTGCTTTTCT +
Preference number: 5 (lower is better)
Translates to: KPQNSTVICLSLKITLCFMPCQS*KMACFS
Trigger: AGAAAAGCAAGCCATTTTCAAGCTTTGGCATGGCAT...GAAACACAGAGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
CDS-3UTR CAA 90 bp AAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCTGTGTTTCGGAAAGAATTGCCTTTaGATACCAGTGCTCTTTGCT +
Preference number: 5 (lower is better)
Translates to: KPQNSTVICLSLKITLCFGKNCL*IPVLFA
Trigger: AGCAAAGAGCACTGGTATCAAAAGGCAATTCTTTCC...GAAACACAGAGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
CDS-3UTR CAA 90 bp CCATTATATCAAGAGCCCCAGATAGTGTTTTCAACTTTCCAACATTGCTATTCTGGAAAGAATTGCCTTTaGATACCAGTGCTCTTTGCT +
Preference number: 5 (lower is better)
Translates to: PLYQEPQIVFSTFQHCYSGKNCL*IPVLFA
Trigger: AGCAAAGAGCACTGGTATCAAAAGGCAATTCTTTCC...AGAATAGCAATGTTGGAAAGTTGAAAACACTATCTGGGGCTCTTGATATAATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CAA 90 bp GTGGAAGCTTTAAGTTTGATTCTGATGTTAGCACTTCAAGTGAAGAAGCCACAGAAAACTTGGAAAGAATaGCCTTTTGATACCAGTGCT +
Preference number: 5 (lower is better)
Translates to: VEALSLILMLALQVKKPQKTWKE*PFDTSA
Trigger: AGCACTGGTATCAAAAGGCAATTCTTTCCAAGTTTT...CTGTGGCTTCTTCACTTGAAGTGCTAACATCAGAATCAAACTTAAAGCTTCCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR CAA 90 bp TATTTTGATTCTTCTTCATCATCATGTTGCAAGCAACCTTGTACAAGAGAATGGGGCGGAAGCAATAATTaGAGGATGCCTACTTTTGTC +
Preference number: 5 (lower is better)
Translates to: YFDSSSSSCCKQPCTREWGGSNN*RMPTFV
Trigger: GACAAAAGTAGGCATCCTCAAATTATTGCTTCCGCC...CCATTCTCTTGTACAAGGTTGCTTGCAACATGATGATGAAGAAGAATCAAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000481600.5
ENST00000530795.1
CDS-3UTR CAA 90 bp CAAGTGAAGAAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTAGGTCGCTTTCTTTTTaGATGCTGCTATCGACAGAT +
Preference number: 5 (lower is better)
Translates to: QVKKPQNSTVICLSLKITRSLSF*MLLSTD
Trigger: ATCTGTCGATAGCAGCATCAAAAAAGAAAGCGACCT...AGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTTCTTCACTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR CAA 90 bp AAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCTGTGTTTCAGGGATCATTCCAGATaGACTGGAATAATTGCCCTT +
Preference number: 5 (lower is better)
Translates to: KPQNSTVICLSLKITLCFRDHSR*TGIIAL
Trigger: AAGGGCAATTATTCCAGTCAATCTGGAATGATCCCT...GAAACACAGAGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
CDS-3UTR CAA 90 bp CAAGTGAAGAAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTAGGGATCATTCCAGATaGACTGGAATAATTGCCCTT +
Preference number: 5 (lower is better)
Translates to: QVKKPQNSTVICLSLKITRDHSR*TGIIAL
Trigger: AAGGGCAATTATTCCAGTCAATCTGGAATGATCCCT...AGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTTCTTCACTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR CAA 90 bp ACCATTATATCAAGAGCCCCAGATAGTGTTTTCAACTTTCCAACATTGCTATTCAGGGATCATTCCAGATaGACTGGAATAATTGCCCTT +
Preference number: 5 (lower is better)
Translates to: TIISRAPDSVFNFPTLLFRDHSR*TGIIAL
Trigger: AAGGGCAATTATTCCAGTCAATCTGGAATGATCCCT...GAATAGCAATGTTGGAAAGTTGAAAACACTATCTGGGGCTCTTGATATAATGGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CAA 90 bp AAGCTGGGAGTAAATGTGCTTGTTGGTTTTGAGAATTGTGTCATCTTCGATGTTAAGTTTCATTTTATGTaGCCAAGAGCCAGGGATCAT +
Preference number: 5 (lower is better)
Translates to: KLGVNVLVGFENCVIFDVKFHFM*PRARDH
Trigger: ATGATCCCTGGCTCTTGGCAACATAAAATGAAACTT...AACATCGAAGATGACACAATTCTCAAAACCAACAAGCACATTTACTCCCAGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CAA 90 bp ATAACGTTGATTCTTTCCAGAAGAGTCGCGGTTTTATTTGCAGTTGCTCTCAAAAAGTTTCATTTTATGTaGCCAAGAGCCAGGGATCAT +
Preference number: 5 (lower is better)
Translates to: ITLILSRRVAVLFAVALKKFHFM*PRARDH
Trigger: ATGATCCCTGGCTCTTGGCAACATAAAATGAAACTT...TTTGAGAGCAACTGCAAATAAAACCGCGACTCTTCTGGAAAGAATCAACGTTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CAA 90 bp GTGGAAGCTTTAAGTTTGATTCTGATGTTAGCACTTCAAGTGAAGAAGCCACAGCTGGTCTTCTTTTGTTaGGTAATGAAACTCTTCAAG +
Preference number: 5 (lower is better)
Translates to: VEALSLILMLALQVKKPQLVFFC*VMKLFK
Trigger: CTTGAAGAGTTTCATTACCAAACAAAAGAAGACCAG...CTGTGGCTTCTTCACTTGAAGTGCTAACATCAGAATCAAACTTAAAGCTTCCAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR CAA 90 bp AAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCTGTGTTTCATCACTTCTTCTCGATaGAGACTAGGAGAAGCATCA +
Preference number: 5 (lower is better)
Translates to: KPQNSTVICLSLKITLCFITSSR*RLGEAS
Trigger: TGATGCTTCTCCTAGTCTCAATCGAGAAGAAGTGAT...GAAACACAGAGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
CDS-3UTR CAA 90 bp GTGTCATCTTCGATGTTATTGCTTTGGCCTAACAAACTGCTACTGCTAGAATTTATGTGCTTGTTGGTTTaGAGAATTGTGTCATCTTCG +
Preference number: 5 (lower is better)
Translates to: VSSSMLLLWPNKLLLLEFMCLLV*RIVSSS
Trigger: CGAAGATGACACAATTCTCAAAACCAACAAGCACAT...AAATTCTAGCAGTAGCAGTTTGTTAGGCCAAAGCAATAACATCGAAGATGACAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525358.1
CDS-3UTR CAA 90 bp TTCTCACCATTATATCAAGAGCCCCAGATAGTGTTTTCAACTTTCCAACATTGCATTATAGCTACTGCTTaGCTATCATCTGATGGATCA +
Preference number: 5 (lower is better)
Translates to: FSPLYQEPQIVFSTFQHCIIATA*LSSDGS
Trigger: TGATCCATCAGATGATAGCAAAGCAGTAGCTATAAT...GCAATGTTGGAAAGTTGAAAACACTATCTGGGGCTCTTGATATAATGGTGAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS-3UTR CAA 90 bp CAAGTGAAGAAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTTGGTGGCATCCTCAATaGATTCAAAGTTGTGAATTC +
Preference number: 5 (lower is better)
Translates to: QVKKPQNSTVICLSLKITWWHPQ*IQSCEF
Trigger: GAATTCACAACTTTGAATCAATTGAGGATGCCACCA...AGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTTCTTCACTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR CAA 90 bp AAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCTGTGTTTCATGTGCTTGTTGGTTTaGAGAATTGTGTCATCTTCG +
Preference number: 5 (lower is better)
Translates to: KPQNSTVICLSLKITLCFMCLLV*RIVSSS
Trigger: CGAAGATGACACAATTCTCAAAACCAACAAGCACAT...GAAACACAGAGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
CDS-3UTR CAA 90 bp AAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCTGTGTTTCACATTAATTGGTTTGTaGTTATCCCTGAGACGTAAG +
Preference number: 5 (lower is better)
Translates to: KPQNSTVICLSLKITLCFTLIGL*LSLRRK
Trigger: CTTACGTCTCAGGGATAACAACAAACCAATTAATGT...GAAACACAGAGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
CDS-3UTR CAA 90 bp TATTTTGATTCTTCTTCATCATCATGTTGCAAGCAACCTTGTACAAGAGAATGGAGCACATTAATTGGTTaGTTGTTATCCCTGAGACGT +
Preference number: 5 (lower is better)
Translates to: YFDSSSSSCCKQPCTREWSTLIG*LLSLRR
Trigger: ACGTCTCAGGGATAACAACAAACCAATTAATGTGCT...CCATTCTCTTGTACAAGGTTGCTTGCAACATGATGATGAAGAAGAATCAAAATA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530795.1
CDS-3UTR CAA 90 bp CAAGTGAAGAAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTATTATAGCTACTGCTTaGCTATCATCTGATGGATCA +
Preference number: 5 (lower is better)
Translates to: QVKKPQNSTVICLSLKITIIATA*LSSDGS
Trigger: TGATCCATCAGATGATAGCAAAGCAGTAGCTATAAT...AGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTTCTTCACTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR CAA 90 bp CAAGTGAAGAAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCTGGTCTTCTTTTGTTaGGTAATGAAACTCTTCAAG +
Preference number: 5 (lower is better)
Translates to: QVKKPQNSTVICLSLKITLVFFC*VMKLFK
Trigger: CTTGAAGAGTTTCATTACCAAACAAAAGAAGACCAG...AGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTTCTTCACTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR CAA 90 bp AAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCTGTGTTTCGTGGAAGCTTTAAGTTaGATTCTGATGTTAGCACTT +
Preference number: 5 (lower is better)
Translates to: KPQNSTVICLSLKITLCFVEALS*ILMLAL
Trigger: AAGTGCTAACATCAGAATCAAACTTAAAGCTTCCAC...GAAACACAGAGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR CAA 90 bp CAAGTGAAGAAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTATTAAATACAGCAAATaGCACAACAGCTCGTCTTTG +
Preference number: 5 (lower is better)
Translates to: QVKKPQNSTVICLSLKITIKYSK*HNSSSL
Trigger: CAAAGACGAGCTGTTGTGCAATTTGCTGTATTTAAT...AGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTTCTTCACTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS-3UTR CAA 90 bp AAGCCACAGAACTCAACCGTAATTTGTCTGTCACTTAAAATAACTCTGTGTTTCATTAAATACAGCAAATaGCACAACAGCTCGTCTTTG +
Preference number: 5 (lower is better)
Translates to: KPQNSTVICLSLKITLCFIKYSK*HNSSSL
Trigger: CAAAGACGAGCTGTTGTGCAATTTGCTGTATTTAAT...GAAACACAGAGTTATTTTAAGTGACAGACAAATTACGGTTGAGTTCTGTGGCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000337623.7
ENST00000356792.9
CDS TCA 90 bp GATAAACTAAGATATAGTCATTTAATGACTACTGAGCTGAGAAAATaGACAGCTACGTGTGCCAACACAGATGTATCTCAAAAACACGAT +
Preference number: 5 (lower is better)
Translates to: DKLRYSHLMTTELRK*TATCANTDVSQKHD
Trigger: ATCGTGTTTTTGAGATACATCTGTGTTGGCACACGTAGCTGTTCATTTTCTCAGCTCAGTAGTCATTAAATGACTATATCTTAGTTTATC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000525091.5
CDS-3UTR CAA 90 bp GTAAATGTGCTTGTTGGTTTTGAGAATTGTGTCATCTTCGATGTTATTGCTTGTAAAACTTGGAAAGAATaGCCTTTTGATACCAGTGCT +
Preference number: 5 (lower is better)
Translates to: VNVLVGFENCVIFDVIACKTWKE*PFDTSA
Trigger: AGCACTGGTATCAAAAGGCAATTCTTTCCAAGTTTT...ACAAGCAATAACATCGAAGATGACACAATTCTCAAAACCAACAAGCACATTTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
CDS CAA 90 bp CCTCGAGCGGCGGCCCCGGCCGGCGGACCCTCGGCTCCGGCCTCCTaGGCATCCCCCATCACTTCGATCCAGGGCAGGCGATACGACGGG +
Preference number: 6 (lower is better)
Translates to: PRAAAPAGGPSAPAS*ASPITSIQGRRYDG
Trigger: CCCGTCGTATCGCCTGCCCTGGATCGAAGTGATGGGGGATGCCAAGGAGGCCGGAGCCGAGGGTCCGCCGGCCGGGGCCGCCGCTCGAGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
ENST00000525091.5
CDS CCA 72 bp GCTGATCCCTGTGCAGAAGATTCCTCGGATTCTCCCTaGGACAGGAGGCTGAGCCCTCCTCGAGCGGCGGCC +
Preference number: 6 (lower is better)
Translates to: ADPCAEDSSDSP*DRRLSPPRAAA
Trigger: GGCCGCCGCTCGAGGAGGGCTCAGCCTCCTGTCCCAGGGAGAATCCGAGGAATCTTCTGCACAGGGATCAGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
ENST00000525091.5
CDS CAA 72 bp TTCGCGGCCAGGGCGGGAATTGTAGTGCGCCTGCGCTaGTCCGAACCTCTTCGGGAGACTACTTCTCGCGGT +
Preference number: 6 (lower is better)
Translates to: FAARAGIVVRLR*SEPLRETTSRG
Trigger: ACCGCGAGAAGTAGTCTCCCGAAGAGGTTCGGACAAGCGCAGGCGCACTACAATTCCCGCCCTGGCCGCGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000419769.6
ENST00000481600.5
CDS CCA 72 bp GCACAGTCCCACTGTGAACCACGTGGTCCAAGCCTGTaGCACACCTTGGCAACTGGACTCTCTGTGAAGGCT +
Preference number: 6 (lower is better)
Translates to: AQSHCEPRGPSL*HTLATGLSVKA
Trigger: AGCCTTCACAGAGAGTCCAGTTGCCAAGGTGTGCCACAGGCTTGGACCACGTGGTTCACAGTGGGACTGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368813.1
CDS CCA 72 bp ACCACGTGGTCCAAGCCTGTGGCACACCTTGGCAACTaGACTCTCTGTGAAGGCTATGCAGGATCTCCTGGT +
Preference number: 6 (lower is better)
Translates to: TTWSKPVAHLGN*TLCEGYAGSPG
Trigger: ACCAGGAGATCCTGCATAGCCTTCACAGAGAGTCCAGTTGCCAAGGTGTGCCACAGGCTTGGACCACGTGGT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368813.1
CDS TCA 72 bp GGAGCAGGCCATGAAGCCCCTTCCGAATCATTTGTCTaGTCTGAACTGGACGATTCCTGCTGTTCTGCGGTG +
Preference number: 6 (lower is better)
Translates to: GAGHEAPSESFV*SELDDSCCSAV
Trigger: CACCGCAGAACAGCAGGAATCGTCCAGTTCAGATCAGACAAATGATTCGGAAGGGGCTTCATGGCCTGCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
ENST00000525091.5
CDS TCA 72 bp TCAAATAAGCATGAGCTAGACTGCACAGTCCCACTGTaGACCACGTGGTCCAAGCCTGTGGCACACCTTGGC +
Preference number: 6 (lower is better)
Translates to: SNKHELDCTVPL*TTWSKPVAHLG
Trigger: GCCAAGGTGTGCCACAGGCTTGGACCACGTGGTTCACAGTGGGACTGTGCAGTCTAGCTCATGCTTATTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368813.1
CDS CCA 72 bp GGTGCTGGGACAACTAGATATCTATATGCAAAAGAGTaGGGAGGCCTGGGAGGCGGAGGTTGCAGTAAGCTG +
Preference number: 6 (lower is better)
Translates to: GAGTTRYLYAKE*GGLGGGGCSKL
Trigger: CAGCTTACTGCAACCTCCGCCTCCCAGGCCTCCCCACTCTTTTGCATATAGATATCTAGTTGTCCCAGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525091.5
CDS CCA 72 bp CTGACAATACCTGATTCCTCAGACAGCTGTGGTACATaGAGGCCAGCCTGTGATGGATGGTTGCAGCTCGAT +
Preference number: 6 (lower is better)
Translates to: LTIPDSSDSCGT*RPACDGWLQLD
Trigger: ATCGAGCTGCAACCATCCATCACAGGCTGGCCTCCATGTACCACAGCTGTCTGAGGAATCAGGTATTGTCAG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525091.5
CDS CAA 72 bp CGAAGGGAGCAGGCCATGAAGCCCCTTCCGAATCATTaGTCTGATCTGAACTGGACGATTCCTGCTGTTCTG +
Preference number: 6 (lower is better)
Translates to: RREQAMKPLPNH*SDLNWTIPAVL
Trigger: CAGAACAGCAGGAATCGTCCAGTTCAGATCAGACAAATGATTCGGAAGGGGCTTCATGGCCTGCTCCCTTCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
ENST00000525091.5
CDS CAA 90 bp AAGGCATTTCGAAGGGAGCAGGCCATGAAGCCCCTTCCGAATCATTaGTCTGATCTGAACTGGACGATTCCTGCTGTTCTGCGGTGGATG +
Preference number: 6 (lower is better)
Translates to: KAFRREQAMKPLPNH*SDLNWTIPAVLRWM
Trigger: CATCCACCGCAGAACAGCAGGAATCGTCCAGTTCAGATCAGACAAATGATTCGGAAGGGGCTTCATGGCCTGCTCCCTTCGAAATGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
ENST00000525091.5
CDS CAA 90 bp ATGGTAGTTCCTGCTGGCCCTAGTTTGGCACTCTCTCGTAACCAGTaGGCAGGTGGGAGTTTCAAGTCTGTTTTCTCTTCAAGGCGTGCA +
Preference number: 6 (lower is better)
Translates to: MVVPAGPSLALSRNQ*AGGSFKSVFSSRRA
Trigger: TGCACGCCTTGAAGAGAAAACAGACTTGAAACTCCCACCTGCCAACTGGTTACGAGAGAGTGCCAAACTAGGGCCAGCAGGAACTACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
ENST00000525091.5
CDS TCA 72 bp CAAGCCTGTGGCACACCTTGGCAACTGGACTCTCTGTaGAGGCTATGCAGGATCTCCTGGTCTTCTTTTGTT +
Preference number: 6 (lower is better)
Translates to: QACGTPWQLDSL*RLCRISWSSFV
Trigger: AACAAAAGAAGACCAGGAGATCCTGCATAGCCTTCACAGAGAGTCCAGTTGCCAAGGTGTGCCACAGGCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368813.1
CDS GCA 72 bp GTTCCCATCTCAAGGCTACAAGAAGCCAATCCGTGCTaGTGCTTTCTGACTCAGGCTGAGCATGATGATGCA +
Preference number: 6 (lower is better)
Translates to: VPISRLQEANPC*CFLTQAEHDDA
Trigger: TGCATCATCATGCTCAGCCTGAGTCAGAAAGCAGCAGCACGGATTGGCTTCTTGTAGCCTTGAGATGGGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469725.1
CDS GCA 72 bp TTCTTCTCGATTGAGACTAGGAGAAGCATCAGCAGCTaGAGCGGCGTCACCACTCTTAGGTGGTCATCTGAA +
Preference number: 6 (lower is better)
Translates to: FFSIETRRSISS*SGVTTLRWSSE
Trigger: TTCAGATGACCACCTAAGAGTGGTGACGCCGCTGCAGCTGCTGATGCTTCTCCTAGTCTCAATCGAGAAGAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527655.5
CDS CAA 72 bp CCTGCTGGCCCTAGTTTGGCACTCTCTCGTAACCAGTaGGCAGGTGGGAGTTTCAAGTCTGTTTTCTCTTCA +
Preference number: 6 (lower is better)
Translates to: PAGPSLALSRNQ*AGGSFKSVFSS
Trigger: TGAAGAGAAAACAGACTTGAAACTCCCACCTGCCAACTGGTTACGAGAGAGTGCCAAACTAGGGCCAGCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
ENST00000525091.5
CDS CAA 90 bp GGAGGGGCAGAAGAGTATTTCACCACAGCTCGGCTCTTCACTTCATaGCCTCCAAGAAATAAAGCTGATCCCTGTGCAGAAGATTCCTCG +
Preference number: 6 (lower is better)
Translates to: GGAEEYFTTARLFTS*PPRNKADPCAEDSS
Trigger: CGAGGAATCTTCTGCACAGGGATCAGCTTTATTTCTTGGAGGCAATGAAGTGAAGAGCCGAGCTGTGGTGAAATACTCTTCTGCCCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
ENST00000525091.5
CDS TCA 72 bp CAAGGCTACAAGAAGCCAATCCGTGCTGCTGCTTTCTaGCTCAGGCTGAGCATGATGATGCACTTGTTTCCT +
Preference number: 6 (lower is better)
Translates to: QGYKKPIRAAAF*LRLSMMMHLFP
Trigger: AGGAAACAAGTGCATCATCATGCTCAGCCTGAGTCAGAAAGCAGCAGCACGGATTGGCTTCTTGTAGCCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000469725.1
CDS GCA 72 bp CTAGTAAGAGAGTCCTTCCTATGCGGTGTACTGCCATaGTCACGTGCGACTTGCTGTAGGGAATTTTCAGGA +
Preference number: 6 (lower is better)
Translates to: LVRESFLCGVLP*SRATCCREFSG
Trigger: TCCTGAAAATTCCCTACAGCAAGTCGCACGTGAGCATGGCAGTACACCGCATAGGAAGGACTCTCTTACTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
ENST00000525091.5
CDS GCA 72 bp GTAATCAGGTTTTGTTCTTTGGGGGCTGAGGCCACATaGCCCACTATGTATGAGGGTTCAAGAGGCTCACTT +
Preference number: 6 (lower is better)
Translates to: VIRFCSLGAEAT*PTMYEGSRGSL
Trigger: AAGTGAGCCTCTTGAACCCTCATACATAGTGGGGCATGTGGCCTCAGCCCCCAAAGAACAAAACCTGATTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
ENST00000530795.1
CDS CCA 72 bp ATGAAGCCCCTTCCGAATCATTTGTCTGATCTGAACTaGACGATTCCTGCTGTTCTGCGGTGGATGAGACAG +
Preference number: 6 (lower is better)
Translates to: MKPLPNHLSDLN*TIPAVLRWMRQ
Trigger: CTGTCTCATCCACCGCAGAACAGCAGGAATCGTCCAGTTCAGATCAGACAAATGATTCGGAAGGGGCTTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
ENST00000525091.5
CDS CAA 72 bp GGCCTTGCTGTAATGAAGATCTGCCAGCACCCGGTGTaGTTTCCTAAGGTGTTCATCACCAACCTAGAACCA +
Preference number: 6 (lower is better)
Translates to: GLAVMKICQHPV*FPKVFITNLEP
Trigger: TGGTTCTAGGTTGGTGATGAACACCTTAGGAAACAACACCGGGTGCTGGCAGATCTTCATTACAGCAAGGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368812.1
ENST00000527655.5
CDS CAA 90 bp CAGCTTTGCGGCCTTGCTGTAATGAAGATCTGCCAGCACCCGGTGTaGTTTCCTAAGGTGTTCATCACCAACCTAGAACCAAACCAAAAC +
Preference number: 6 (lower is better)
Translates to: QLCGLAVMKICQHPV*FPKVFITNLEPNQN
Trigger: GTTTTGGTTTGGTTCTAGGTTGGTGATGAACACCTTAGGAAACAACACCGGGTGCTGGCAGATCTTCATTACAGCAAGGCCGCAAAGCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368812.1
ENST00000527655.5
CDS GCA 72 bp GAATATCTAGCTCATCTAGTAAGAGAGTCCTTCCTATaGGGTGTACTGCCATGCTCACGTGCGACTTGCTGT +
Preference number: 6 (lower is better)
Translates to: EYLAHLVRESFL*GVLPCSRATCC
Trigger: ACAGCAAGTCGCACGTGAGCATGGCAGTACACCGCATAGGAAGGACTCTCTTACTAGATGAGCTAGATATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
ENST00000525091.5
CDS GCA 72 bp CTGAGGGCAAAAGCAAGCTTAAGGGTGCCAAGACAATaGAGCAGAGGAGTAGTCTTTTCAGCAAATGGTGCT +
Preference number: 6 (lower is better)
Translates to: LRAKASLRVPRQ*SRGVVFSANGA
Trigger: AGCACCATTTGCTGAAAAGACTACTCCTCTGCTGCATTGTCTTGGCACCCTTAAGCTTGCTTTTGCCCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000525091.5
CDS CCA 72 bp CTGCTGGGTATCTGCCTCCTCCAAATATGGGCATGTTaGAGCCGACCAACATATGGATATCTTCAAATGTCC +
Preference number: 6 (lower is better)
Translates to: LLGICLLQIWAC*SRPTYGYLQMS
Trigger: GGACATTTGAAGATATCCATATGTTGGTCGGCTCCAACATGCCCATATTTGGAGGAGGCAGATACCCAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
ENST00000525091.5
ENST00000530795.1
CDS CCA 72 bp CCTCGGCCTCAGATTATTCTCAGAAATACAGGCATTTaGGCACCAGGATTCATGTACAATCCTGCTGGCACT +
Preference number: 6 (lower is better)
Translates to: PRPQIILRNTGI*APGFMYNPAGT
Trigger: AGTGCCAGCAGGATTGTACATGAATCCTGGTGCCCAAATGCCTGTATTTCTGAGAATAATCTGAGGCCGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525091.5
CDS CAA 72 bp TCCTCGGCCTCAGATTATTCTCAGAAATACAGGCATTaGGGCACCAGGATTCATGTACAATCCTGCTGGCAC +
Preference number: 6 (lower is better)
Translates to: SSASDYSQKYRH*GTRIHVQSCWH
Trigger: GTGCCAGCAGGATTGTACATGAATCCTGGTGCCCAAATGCCTGTATTTCTGAGAATAATCTGAGGCCGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525091.5
CDS CAA 90 bp TCATATGCCATGCCAAAGCTTGAAAATGGCTTGCTTTTCTTGCTGTaGCCAAGAATGGTAGTTCCTGCTGGCCCTAGTTTGGCACTCTCT +
Preference number: 6 (lower is better)
Translates to: SYAMPKLENGLLFLL*PRMVVPAGPSLALS
Trigger: AGAGAGTGCCAAACTAGGGCCAGCAGGAACTACCATTCTTGGCAACAGCAAGAAAAGCAAGCCATTTTCAAGCTTTGGCATGGCATATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
ENST00000525091.5
CDS CAA 72 bp ACTGCTGGGTATCTGCCTCCTCCAAATATGGGCATGTaGGAGCCGACCAACATATGGATATCTTCAAATGTC +
Preference number: 6 (lower is better)
Translates to: TAGYLPPPNMGM*EPTNIWISSNV
Trigger: GACATTTGAAGATATCCATATGTTGGTCGGCTCCAACATGCCCATATTTGGAGGAGGCAGATACCCAGCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
ENST00000525091.5
ENST00000530795.1
CDS CAA 90 bp CGTAAGCTGACTGCTGGGTATCTGCCTCCTCCAAATATGGGCATGTaGGAGCCGACCAACATATGGATATCTTCAAATGTCCATAGAATA +
Preference number: 6 (lower is better)
Translates to: RKLTAGYLPPPNMGM*EPTNIWISSNVHRI
Trigger: TATTCTATGGACATTTGAAGATATCCATATGTTGGTCGGCTCCAACATGCCCATATTTGGAGGAGGCAGATACCCAGCAGTCAGCTTACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
ENST00000525091.5
ENST00000530795.1
CDS TCA 72 bp TTCCCAGTTTTAAAGCCTTGGCAACTGGACTCTCTGTaGAGGCTATGCAGGATCTCCTGGTCTTCTTTTGTT +
Preference number: 6 (lower is better)
Translates to: FPVLKPWQLDSL*RLCRISWSSFV
Trigger: AACAAAAGAAGACCAGGAGATCCTGCATAGCCTTCACAGAGAGTCCAGTTGCCAAGGCTTTAAAACTGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000419769.6
CDS TCA 72 bp GCCAACACAGATGTATCTCAAAAACACGATGTTAAGTaGCAGGCAGTAAGCCACAGAACACCAACAGCGGAT +
Preference number: 6 (lower is better)
Translates to: ANTDVSQKHDVK*QAVSHRTPTAD
Trigger: ATCCGCTGTTGGTGTTCTGTGGCTTACTGCCTGTCACTTAACATCGTGTTTTTGAGATACATCTGTGTTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000525091.5
CDS GCA 72 bp AAGCCACAGAACACCAACAGCGGATTCGTTTTCCCATaGTCAACATGGAGCACAATGCGGACATATTGTTTA +
Preference number: 6 (lower is better)
Translates to: KPQNTNSGFVFP*STWSTMRTYCL
Trigger: TAAACAATATGTCCGCATTGTGCTCCATGTTGAGCATGGGAAAACGAATCCGCTGTTGGTGTTCTGTGGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525091.5
CDS CCA 72 bp AACACCAACAGCGGATTCGTTTTCCCATGCTCAACATaGAGCACAATGCGGACATATTGTTTAAGTGGCACA +
Preference number: 6 (lower is better)
Translates to: NTNSGFVFPCST*STMRTYCLSGT
Trigger: TGTGCCACTTAAACAATATGTCCGCATTGTGCTCCATGTTGAGCATGGGAAAACGAATCCGCTGTTGGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525091.5
CDS CAA 72 bp GAAGAGTATTTCACCACAGCTCGGCTCTTCACTTCATaGCCTCCAAGAAATAAAGCTGATCCCTGTGCAGAA +
Preference number: 6 (lower is better)
Translates to: EEYFTTARLFTS*PPRNKADPCAE
Trigger: TTCTGCACAGGGATCAGCTTTATTTCTTGGAGGCAATGAAGTGAAGAGCCGAGCTGTGGTGAAATACTCTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
ENST00000525091.5
CDS TCA 72 bp ACAGACGCAGCAGAAAATTTAGGACAGCAGTTCACCTaGGTGGACGTCAAGGAAGACATATATGACCATGTT +
Preference number: 6 (lower is better)
Translates to: TDAAENLGQQFT*VDVKEDIYDHV
Trigger: AACATGGTCATATATGTCTTCCTTGACGTCCACTCAGGTGAACTGCTGTCCTAAATTTTCTGCTGCGTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525091.5
CDS GCA 72 bp AAATCCTTCACGGTAACTACTTCAGGCTTCACTAAGTaGTTCTTAGTTATTTTTCCCCCACTGTGGGTCTTA +
Preference number: 6 (lower is better)
Translates to: KSFTVTTSGFTK*FLVIFPPLWVL
Trigger: TAAGACCCACAGTGGGGGAAAAATAACTAAGAAGCACTTAGTGAAGCCTGAAGTAGTTACCGTGAAGGATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000368812.1
ENST00000527655.5
CDS CAA 72 bp ACTGCTAGAATTTCTAGCAGGTCAATGCCAATGCAGTaGTCATATGATGATGAAATGCCTGCATCACCTTGT +
Preference number: 6 (lower is better)
Translates to: TARISSRSMPMQ*SYDDEMPASPC
Trigger: ACAAGGTGATGCAGGCATTTCATCATCATATGACAACTGCATTGGCATTGACCTGCTAGAAATTCTAGCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525358.1
CDS CAA 72 bp CTTTTTCTTCCTCTGCCACTTCTGATCAATGAGTCTTaGATAAAACTCTTTCAACCATGTCCAGTCACCAGT +
Preference number: 6 (lower is better)
Translates to: LFLPLPLLINES*IKLFQPCPVTS
Trigger: ACTGGTGACTGGACATGGTTGAAAGAGTTTTATCAAAGACTCATTGATCAGAAGTGGCAGAGGAAGAAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000337623.7
ENST00000356792.9
ENST00000368815.6
ENST00000419769.6
ENST00000481600.5
ENST00000525091.5
CDS CAA 90 bp CAAACTGCTACTGCTAGAATTTCTAGCAGGTCAATGCCAATGCAGTaGTCATATGATGATGAAATGCCTGCATCACCTTGTTTTCTTTTT +
Preference number: 6 (lower is better)
Translates to: QTATARISSRSMPMQ*SYDDEMPASPCFLF
Trigger: AAAAAGAAAACAAGGTGATGCAGGCATTTCATCATCATATGACAACTGCATTGGCATTGACCTGCTAGAAATTCTAGCAGTAGCAGTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525358.1
CDS TCA 72 bp GTGCTCATATCTTTGTACCCTCTCCAACAGTGGGTGTaGCCATTTGTCATAAAATTTGGCAATCTAATAAAT +
Preference number: 6 (lower is better)
Translates to: VLISLYPLQQWV*PFVIKFGNLIN
Trigger: ATTTATTAGATTGCCAAATTTTATGACAAATGGTCACACCCACTGTTGGAGAGGGTACAAAGATATGAGCAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000469725.1
CDS TCA 72 bp AGATATAGTCATTTAATGACTACTGAGCTGAGAAAATaGACAGCTACGTGTGCCAACACAGATGTATCTCAA +
Preference number: 6 (lower is better)
Translates to: RYSHLMTTELRK*TATCANTDVSQ
Trigger: TTGAGATACATCTGTGTTGGCACACGTAGCTGTTCATTTTCTCAGCTCAGTAGTCATTAAATGACTATATCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525091.5