RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EDNRB (Homo sapiens)

Ensembl gene IDs: ENSG00000136160

Ensembl transcript IDs: ENST00000377211.8, ENST00000475537.2, ENST00000626030.1, ENST00000643890.1, ENST00000645696.1, ENST00000646605.1, ENST00000646607.2, ENST00000646948.1

Found 499 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACCACAGCATGGGTGAGAGAGGGTGCTACCTGCCCCTTTGTCATGTaGACACTGCACCAGGCAGTTCACAGTCTTTATTATGAGGTCACT +
Preference number: 1 (lower is better)
Translates to: TTAWVREGATCPFVM*TLHQAVHSLYYEVT
Trigger: AGTGACCTCATAATAAAGACTGTGAACTGCCTGGTGCAGTGTCCACATGACAAAGGGGCAGGTAGCACCCTCTCTCACCCATGCTGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
3UTR GCA 90 bp CTAGAAACCATTTTAACCACAGCATGGGTGAGAGAGGGTGCTACCTaGCCCTTTGTCATGTGGACACTGCACCAGGCAGTTCACAGTCTT +
Preference number: 1 (lower is better)
Translates to: LETILTTAWVREGAT*PFVMWTLHQAVHSL
Trigger: AAGACTGTGAACTGCCTGGTGCAGTGTCCACATGACAAAGGGGCAGGTAGCACCCTCTCTCACCCATGCTGTGGTTAAAATGGTTTCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
3UTR GCA 90 bp ACATATGCTAGAAACCATTTTAACCACAGCATGGGTGAGAGAGGGTaGTACCTGCCCCTTTGTCATGTGGACACTGCACCAGGCAGTTCA +
Preference number: 1 (lower is better)
Translates to: TYARNHFNHSMGERG*YLPLCHVDTAPGSS
Trigger: TGAACTGCCTGGTGCAGTGTCCACATGACAAAGGGGCAGGTAGCACCCTCTCTCACCCATGCTGTGGTTAAAATGGTTTCTAGCATATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
3UTR TCA 90 bp GACCGAGTTAAAGCTCTTGGGCCCAATTTATTTCGAAAGTCACTCTaGGAACATTGCACTGTGTTTTGCTGGAACAAAATCAGGACCTTT +
Preference number: 1 (lower is better)
Translates to: DRVKALGPNLFRKSL*EHCTVFCWNKIRTF
Trigger: AAAGGTCCTGATTTTGTTCCAGCAAAACACAGTGCAATGTTCTCAGAGTGACTTTCGAAATAAATTGGGCCCAAGAGCTTTAACTCGGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
3UTR TCA 90 bp CAAGATGAGCTGTATTTATTACTGGAACGGAAGTTGTCATATCCGTaGTCATTAGCTTTGAACTTTAAGCACGACTGCTTTTCCTCCAAG +
Preference number: 1 (lower is better)
Translates to: QDELYLLLERKLSYP*SLALNFKHDCFSSK
Trigger: CTTGGAGGAAAAGCAGTCGTGCTTAAAGTTCAAAGCTAATGATCACGGATATGACAACTTCCGTTCCAGTAATAAATACAGCTCATCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645696.1
3UTR TCA 90 bp GCCACATTGTTGGGTTTTGGTTTACTGTACCATCACATTCAATATTaGCAGAAAACAACATTACTAGCTTATTTCCAACATGTGGCCCAG +
Preference number: 1 (lower is better)
Translates to: ATLLGFGLLYHHIQY*QKTTLLAYFQHVAQ
Trigger: CTGGGCCACATGTTGGAAATAAGCTAGTAATGTTGTTTTCTGTCAATATTGAATGTGATGGTACAGTAAACCAAAACCCAACAATGTGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
3UTR-3UTR TCA 90 bp TGGGCCCAATTTATTTCGAAAGTCACTCTGAGAACATTGCACTGTGTTTTGCTGTCCATCGTAAAGCTATaGGCACAGGGCCTGCCCTCA +
Preference number: 2 (lower is better)
Translates to: WAQFISKVTLRTLHCVLLSIVKL*AQGLPS
Trigger: TGAGGGCAGGCCCTGTGCTCATAGCTTTACGATGGA...CAGCAAAACACAGTGCAATGTTCTCAGAGTGACTTTCGAAATAAATTGGGCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
3UTR-3UTR GCA 90 bp GGAACGCACAAAGCTAAGAGGTTCTTACGGTCTCAAAAAGCAGTTTTGCCTCTATTGTCATGTGGACACTaGACCAGGCAGTTCACAGTC +
Preference number: 2 (lower is better)
Translates to: GTHKAKRFLRSQKAVLPLLSCGH*TRQFTV
Trigger: GACTGTGAACTGCCTGGTGCAGTGTCCACATGACAA...TAGAGGCAAAACTGCTTTTTGAGACCGTAAGAACCTCTTAGCTTTGTGCGTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
3UTR-3UTR GCA 90 bp TGGGCCCAATTTATTTCGAAAGTCACTCTGAGAACATTGCACTGTGTTTTGCTGATGGGTGAGAGAGGGTaGTACCTGCCCCTTTGTCAT +
Preference number: 2 (lower is better)
Translates to: WAQFISKVTLRTLHCVLLMGERG*YLPLCH
Trigger: ATGACAAAGGGGCAGGTAGCACCCTCTCTCACCCAT...CAGCAAAACACAGTGCAATGTTCTCAGAGTGACTTTCGAAATAAATTGGGCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
3UTR-3UTR TCA 90 bp TGGGCCCAATTTATTTCGAAAGTCACTCTGAGAACATTGCACTGTGTTTTGCTGCAGGACCTTTTGCATTaGTGTGACGAGGCAATGACG +
Preference number: 2 (lower is better)
Translates to: WAQFISKVTLRTLHCVLLQDLLH*CDEAMT
Trigger: CGTCATTGCCTCGTCACATCAATGCAAAAGGTCCTG...CAGCAAAACACAGTGCAATGTTCTCAGAGTGACTTTCGAAATAAATTGGGCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
3UTR-3UTR GCA 90 bp TGGGCCCAATTTATTTCGAAAGTCACTCTGAGAACATTGCACTGTGTTTTGCTGTTCAGCTGGCACATGTaGCAGTCTGTTACATGCTGC +
Preference number: 2 (lower is better)
Translates to: WAQFISKVTLRTLHCVLLFSWHM*QSVTCC
Trigger: GCAGCATGTAACAGACTGGCACATGTGCCAGCTGAA...CAGCAAAACACAGTGCAATGTTCTCAGAGTGACTTTCGAAATAAATTGGGCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
3UTR-3UTR CCA 90 bp GCATACCCATGTTTTGCTATAAACTGTATTCCTTTGGCCATATGTAAGCTATCAGGGAATCTGTCCCCATaGGTTTCCTCCAACCCCACC +
Preference number: 2 (lower is better)
Translates to: AYPCFAINCIPLAICKLSGNLSP*VSSNPT
Trigger: GGTGGGGTTGGAGGAAACCCATGGGGACAGATTCCC...TGATAGCTTACATATGGCCAAAGGAATACAGTTTATAGCAAAACATGGGTATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
3UTR-3UTR GCA 90 bp CTTTCTGGCCACATTGTTGGGTTTTGGTTTACTGTACCATCACATTCAATATTGATGGGTGAGAGAGGGTaGTACCTGCCCCTTTGTCAT +
Preference number: 2 (lower is better)
Translates to: LSGHIVGFWFTVPSHSILMGERG*YLPLCH
Trigger: ATGACAAAGGGGCAGGTAGCACCCTCTCTCACCCAT...CAATATTGAATGTGATGGTACAGTAAACCAAAACCCAACAATGTGGCCAGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
3UTR-3UTR GCA 90 bp TTGTCATGTGGACACTGCACCAGGCAGTTCACAGTCTTTATTATGAGGTCACTGATGTTGGTTACATATTaGAGAATGCTGAGGTTTGGG +
Preference number: 2 (lower is better)
Translates to: LSCGHCTRQFTVFIMRSLMLVTY*RMLRFG
Trigger: CCCAAACCTCAGCATTCTGCAATATGTAACCAACAT...CAGTGACCTCATAATAAAGACTGTGAACTGCCTGGTGCAGTGTCCACATGACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
3UTR-3UTR GCA 90 bp ATTATTGCTCTTTCTTTCTGGCCACATTGTTGGGTTTTGGTTTACTGTACCATCTTCAGCTGGCACATGTaGCAGTCTGTTACATGCTGC +
Preference number: 2 (lower is better)
Translates to: IIALSFWPHCWVLVYCTIFSWHM*QSVTCC
Trigger: GCAGCATGTAACAGACTGGCACATGTGCCAGCTGAA...GATGGTACAGTAAACCAAAACCCAACAATGTGGCCAGAAAGAAAGAGCAATAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
3UTR-3UTR GCA 90 bp CTTTCTGGCCACATTGTTGGGTTTTGGTTTACTGTACCATCACATTCAATATTGTTCAGCTGGCACATGTaGCAGTCTGTTACATGCTGC +
Preference number: 2 (lower is better)
Translates to: LSGHIVGFWFTVPSHSILFSWHM*QSVTCC
Trigger: GCAGCATGTAACAGACTGGCACATGTGCCAGCTGAA...CAATATTGAATGTGATGGTACAGTAAACCAAAACCCAACAATGTGGCCAGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
3UTR-3UTR GCA 90 bp CAATTTATTTCGAAAGTCACTCTGAGAACATTGCACTGTGTTTTGCTGGAACAAAGAGAGGGTGCTACCTaGCCCTTTGTCATGTGGACA +
Preference number: 2 (lower is better)
Translates to: QFISKVTLRTLHCVLLEQREGAT*PFVMWT
Trigger: TGTCCACATGACAAAGGGGCAGGTAGCACCCTCTCT...TTGTTCCAGCAAAACACAGTGCAATGTTCTCAGAGTGACTTTCGAAATAAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
3UTR-3UTR CCA 90 bp GCATACCCATGTTTTGCTATAAACTGTATTCCTTTGGCCATATGTAAGCTATCATGCCCCTTTGTCATGTaGACACTGCACCAGGCAGTT +
Preference number: 2 (lower is better)
Translates to: AYPCFAINCIPLAICKLSCPFVM*TLHQAV
Trigger: AACTGCCTGGTGCAGTGTCCACATGACAAAGGGGCA...TGATAGCTTACATATGGCCAAAGGAATACAGTTTATAGCAAAACATGGGTATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
3UTR-3UTR TCA 90 bp GGAACGCACAAAGCTAAGAGGTTCTTACGGTCTCAAAAAGCAGTTTTGCCTCTATCTGTTACTCCCTCCTaGTCATTTAAATGTTTCCAG +
Preference number: 2 (lower is better)
Translates to: GTHKAKRFLRSQKAVLPLSVTPS*SFKCFQ
Trigger: CTGGAAACATTTAAATGATCAGGAGGGAGTAACAGA...TAGAGGCAAAACTGCTTTTTGAGACCGTAAGAACCTCTTAGCTTTGTGCGTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
3UTR-3UTR TCA 90 bp CTTTCTGGCCACATTGTTGGGTTTTGGTTTACTGTACCATCACATTCAATATTGCCTTTTGCATTGATGTaGCGAGGCAATGACGAACGT +
Preference number: 2 (lower is better)
Translates to: LSGHIVGFWFTVPSHSILPFALM*RGNDER
Trigger: ACGTTCGTCATTGCCTCGTCACATCAATGCAAAAGG...CAATATTGAATGTGATGGTACAGTAAACCAAAACCCAACAATGTGGCCAGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
3UTR-3UTR GCA 90 bp TGGGCCCAATTTATTTCGAAAGTCACTCTGAGAACATTGCACTGTGTTTTGCTGCAGTCTGTTACATGCTaGTTGTTTGTGACATGTTGG +
Preference number: 2 (lower is better)
Translates to: WAQFISKVTLRTLHCVLLQSVTC*LFVTCW
Trigger: CCAACATGTCACAAACAAGCAGCATGTAACAGACTG...CAGCAAAACACAGTGCAATGTTCTCAGAGTGACTTTCGAAATAAATTGGGCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
3UTR-3UTR GCA 90 bp TGGGCCCAATTTATTTCGAAAGTCACTCTGAGAACATTGCACTGTGTTTTGCTGTGCCAGTCTGTTACATaGTGCTTGTTTGTGACATGT +
Preference number: 2 (lower is better)
Translates to: WAQFISKVTLRTLHCVLLCQSVT*CLFVTC
Trigger: ACATGTCACAAACAAGCAGCATGTAACAGACTGGCA...CAGCAAAACACAGTGCAATGTTCTCAGAGTGACTTTCGAAATAAATTGGGCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
3UTR-3UTR TCA 90 bp CAATTTATTTCGAAAGTCACTCTGAGAACATTGCACTGTGTTTTGCTGGAACAACCTTTTGCATTGATGTaGCGAGGCAATGACGAACGT +
Preference number: 2 (lower is better)
Translates to: QFISKVTLRTLHCVLLEQPFALM*RGNDER
Trigger: ACGTTCGTCATTGCCTCGTCACATCAATGCAAAAGG...TTGTTCCAGCAAAACACAGTGCAATGTTCTCAGAGTGACTTTCGAAATAAATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
3UTR-3UTR GCA 90 bp TGGGCCCAATTTATTTCGAAAGTCACTCTGAGAACATTGCACTGTGTTTTGCTGATGTTGGTTACATATTaGAGAATGCTGAGGTTTGGG +
Preference number: 2 (lower is better)
Translates to: WAQFISKVTLRTLHCVLLMLVTY*RMLRFG
Trigger: CCCAAACCTCAGCATTCTGCAATATGTAACCAACAT...CAGCAAAACACAGTGCAATGTTCTCAGAGTGACTTTCGAAATAAATTGGGCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
3UTR-3UTR GCA 90 bp ATTATTGCTCTTTCTTTCTGGCCACATTGTTGGGTTTTGGTTTACTGTACCATCTATGAGCACAGGGCCTaGCCTCATTTAATCATCTAC +
Preference number: 2 (lower is better)
Translates to: IIALSFWPHCWVLVYCTIYEHRA*PHLIIY
Trigger: GTAGATGATTAAATGAGGGCAGGCCCTGTGCTCATA...GATGGTACAGTAAACCAAAACCCAACAATGTGGCCAGAAAGAAAGAGCAATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
3UTR-3UTR CCA 90 bp GGAACGCACAAAGCTAAGAGGTTCTTACGGTCTCAAAAAGCAGTTTTGCCTCTATATTTTAAATTCAGCTaGCACATGTGCCAGTCTGTT +
Preference number: 2 (lower is better)
Translates to: GTHKAKRFLRSQKAVLPLYFKFS*HMCQSV
Trigger: AACAGACTGGCACATGTGCCAGCTGAATTTAAAATA...TAGAGGCAAAACTGCTTTTTGAGACCGTAAGAACCTCTTAGCTTTGTGCGTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
3UTR-3UTR GCA 90 bp ATTATTGCTCTTTCTTTCTGGCCACATTGTTGGGTTTTGGTTTACTGTACCATCTGCCAGTCTGTTACATaGTGCTTGTTTGTGACATGT +
Preference number: 2 (lower is better)
Translates to: IIALSFWPHCWVLVYCTICQSVT*CLFVTC
Trigger: ACATGTCACAAACAAGCAGCATGTAACAGACTGGCA...GATGGTACAGTAAACCAAAACCCAACAATGTGGCCAGAAAGAAAGAGCAATAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
3UTR CAA 90 bp GGCCACATTGTTGGGTTTTGGTTTACTGTACCATCACATTCAATATaGACAGAAAACAACATTACTAGCTTATTTCCAACATGTGGCCCA +
Preference number: 2 (lower is better)
Translates to: GHIVGFWFTVPSHSI*TENNITSLFPTCGP
Trigger: TGGGCCACATGTTGGAAATAAGCTAGTAATGTTGTTTTCTGTCAATATTGAATGTGATGGTACAGTAAACCAAAACCCAACAATGTGGCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
3UTR-3UTR TCA 90 bp CTTTCTGGCCACATTGTTGGGTTTTGGTTTACTGTACCATCACATTCAATATTGAGCCTAAGTGTTGTGTaGATATCCTGGAAGTTGTTA +
Preference number: 2 (lower is better)
Translates to: LSGHIVGFWFTVPSHSILSLSVV*ISWKLL
Trigger: TAACAACTTCCAGGATATTCACACAACACTTAGGCT...CAATATTGAATGTGATGGTACAGTAAACCAAAACCCAACAATGTGGCCAGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
3UTR-3UTR TCA 90 bp CTTTCTGGCCACATTGTTGGGTTTTGGTTTACTGTACCATCACATTCAATATTGAGTTTTGCCTCTAGATaGAAGAAAAGCACCATGTCA +
Preference number: 2 (lower is better)
Translates to: LSGHIVGFWFTVPSHSILSFASR*KKSTMS
Trigger: TGACATGGTGCTTTTCTTTCATCTAGAGGCAAAACT...CAATATTGAATGTGATGGTACAGTAAACCAAAACCCAACAATGTGGCCAGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
3UTR-3UTR GCA 90 bp CTTTCTGGCCACATTGTTGGGTTTTGGTTTACTGTACCATCACATTCAATATTGATGTTGGTTACATATTaGAGAATGCTGAGGTTTGGG +
Preference number: 2 (lower is better)
Translates to: LSGHIVGFWFTVPSHSILMLVTY*RMLRFG
Trigger: CCCAAACCTCAGCATTCTGCAATATGTAACCAACAT...CAATATTGAATGTGATGGTACAGTAAACCAAAACCCAACAATGTGGCCAGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
3UTR-3UTR GCA 90 bp ATTATTGCTCTTTCTTTCTGGCCACATTGTTGGGTTTTGGTTTACTGTACCATCATGTTGGTTACATATTaGAGAATGCTGAGGTTTGGG +
Preference number: 2 (lower is better)
Translates to: IIALSFWPHCWVLVYCTIMLVTY*RMLRFG
Trigger: CCCAAACCTCAGCATTCTGCAATATGTAACCAACAT...GATGGTACAGTAAACCAAAACCCAACAATGTGGCCAGAAAGAAAGAGCAATAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
3UTR-3UTR GCA 90 bp CAATTTATTTCGAAAGTCACTCTGAGAACATTGCACTGTGTTTTGCTGGAACAACAGTCTGTTACATGCTaGTTGTTTGTGACATGTTGG +
Preference number: 2 (lower is better)
Translates to: QFISKVTLRTLHCVLLEQQSVTC*LFVTCW
Trigger: CCAACATGTCACAAACAAGCAGCATGTAACAGACTG...TTGTTCCAGCAAAACACAGTGCAATGTTCTCAGAGTGACTTTCGAAATAAATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
3UTR-3UTR CCA 90 bp TGGGCCCAATTTATTTCGAAAGTCACTCTGAGAACATTGCACTGTGTTTTGCTGTTGTTTGTGACATGTTaGTTACATATTGCAGAATGC +
Preference number: 2 (lower is better)
Translates to: WAQFISKVTLRTLHCVLLLFVTC*LHIAEC
Trigger: GCATTCTGCAATATGTAACCAACATGTCACAAACAA...CAGCAAAACACAGTGCAATGTTCTCAGAGTGACTTTCGAAATAAATTGGGCCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
3UTR-3UTR CCA 90 bp CTTTCTGGCCACATTGTTGGGTTTTGGTTTACTGTACCATCACATTCAATATTGTGCACTGTGTTTTGCTaGAACAAAATCAGGACCTTT +
Preference number: 2 (lower is better)
Translates to: LSGHIVGFWFTVPSHSILCTVFC*NKIRTF
Trigger: AAAGGTCCTGATTTTGTTCCAGCAAAACACAGTGCA...CAATATTGAATGTGATGGTACAGTAAACCAAAACCCAACAATGTGGCCAGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
3UTR-3UTR CCA 90 bp ATTATTGCTCTTTCTTTCTGGCCACATTGTTGGGTTTTGGTTTACTGTACCATCTGCACTGTGTTTTGCTaGAACAAAATCAGGACCTTT +
Preference number: 2 (lower is better)
Translates to: IIALSFWPHCWVLVYCTICTVFC*NKIRTF
Trigger: AAAGGTCCTGATTTTGTTCCAGCAAAACACAGTGCA...GATGGTACAGTAAACCAAAACCCAACAATGTGGCCAGAAAGAAAGAGCAATAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
3UTR-3UTR TCA 90 bp GATCATTTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCAGCCTAAGTGTTGTGTaGATATCCTGGAAGTTGTTA +
Preference number: 2 (lower is better)
Translates to: DHLNVSSVRKMQQLNCSLSLSVV*ISWKLL
Trigger: TAACAACTTCCAGGATATTCACACAACACTTAGGCT...GAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAAATGATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
3UTR-3UTR TCA 90 bp TTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATTTGCAGCCTAAGTGTTGTGTaGATATCCTGGAAGTTGTTA +
Preference number: 2 (lower is better)
Translates to: LNVSSVRKMQQLNCSLICSLSVV*ISWKLL
Trigger: TAACAACTTCCAGGATATTCACACAACACTTAGGCT...GCAAATGAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
3UTR-3UTR TCA 90 bp GCATACCCATGTTTTGCTATAAACTGTATTCCTTTGGCCATATGTAAGCTATCATCTGTTACTCCCTCCTaGTCATTTAAATGTTTCCAG +
Preference number: 2 (lower is better)
Translates to: AYPCFAINCIPLAICKLSSVTPS*SFKCFQ
Trigger: CTGGAAACATTTAAATGATCAGGAGGGAGTAACAGA...TGATAGCTTACATATGGCCAAAGGAATACAGTTTATAGCAAAACATGGGTATGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
3UTR-3UTR TCA 90 bp GCATACCCATGTTTTGCTATAAACTGTATTCCTTTGGCCATATGTAAGCTATCAAGTTTTGCCTCTAGATaGAAGAAAAGCACCATGTCA +
Preference number: 2 (lower is better)
Translates to: AYPCFAINCIPLAICKLSSFASR*KKSTMS
Trigger: TGACATGGTGCTTTTCTTTCATCTAGAGGCAAAACT...TGATAGCTTACATATGGCCAAAGGAATACAGTTTATAGCAAAACATGGGTATGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
3UTR-3UTR TCA 90 bp GCATACCCATGTTTTGCTATAAACTGTATTCCTTTGGCCATATGTAAGCTATCAATGATAACAGGCCTCTaGAAAAGTGATTGGGATGAA +
Preference number: 2 (lower is better)
Translates to: AYPCFAINCIPLAICKLSMITGL*KSDWDE
Trigger: TTCATCCCAATCACTTTTTCAGAGGCCTGTTATCAT...TGATAGCTTACATATGGCCAAAGGAATACAGTTTATAGCAAAACATGGGTATGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
3UTR-3UTR CCA 90 bp GCATACCCATGTTTTGCTATAAACTGTATTCCTTTGGCCATATGTAAGCTATCATGCACTGTGTTTTGCTaGAACAAAATCAGGACCTTT +
Preference number: 2 (lower is better)
Translates to: AYPCFAINCIPLAICKLSCTVFC*NKIRTF
Trigger: AAAGGTCCTGATTTTGTTCCAGCAAAACACAGTGCA...TGATAGCTTACATATGGCCAAAGGAATACAGTTTATAGCAAAACATGGGTATGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
3UTR-3UTR CCA 90 bp CTTTCTGGCCACATTGTTGGGTTTTGGTTTACTGTACCATCACATTCAATATTGCTTATTTCCAACATGTaGCCCAGCCTATTAAAAGAA +
Preference number: 2 (lower is better)
Translates to: LSGHIVGFWFTVPSHSILLISNM*PSLLKE
Trigger: TTCTTTTAATAGGCTGGGCCACATGTTGGAAATAAG...CAATATTGAATGTGATGGTACAGTAAACCAAAACCCAACAATGTGGCCAGAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
3UTR-3UTR CCA 90 bp TTCAAGATGAGCTGTATTTATTACTGGAACGGAAGTTGTCATATCCGTGATCATTTTTCTTCAAATGACTaGCACCAGCAGCATAAGCAT +
Preference number: 2 (lower is better)
Translates to: FKMSCIYYWNGSCHIRDHFSSND*HQQHKH
Trigger: ATGCTTATGCTGCTGGTGCCAGTCATTTGAAGAAAA...ATGATCACGGATATGACAACTTCCGTTCCAGTAATAAATACAGCTCATCTTGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645696.1
3UTR CAA 90 bp AACAAAGTAAAAATTTGGGCATATTTTAAGACCGAGTTAAAGCTCTaGGGCCCAATTTATTTCGAAAGTCACTCTGAGAACATTGCACTG +
Preference number: 2 (lower is better)
Translates to: NKVKIWAYFKTELKL*GPIYFESHSENIAL
Trigger: CAGTGCAATGTTCTCAGAGTGACTTTCGAAATAAATTGGGCCCAAGAGCTTTAACTCGGTCTTAAAATATGCCCAAATTTTTACTTTGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
3UTR-3UTR GCA 90 bp CTTTCTGGCCACATTGTTGGGTTTTGGTTTACTGTACCATCACATTCAATATTGCTGATTTTCTTTCCATaGCGTAAACAGCTCATAAAA +
Preference number: 2 (lower is better)
Translates to: LSGHIVGFWFTVPSHSILLIFFP*RKQLIK
Trigger: TTTTATGAGCTGTTTACGGCATGGAAAGAAAATCAG...CAATATTGAATGTGATGGTACAGTAAACCAAAACCCAACAATGTGGCCAGAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
3UTR-3UTR GCA 90 bp GCATACCCATGTTTTGCTATAAACTGTATTCCTTTGGCCATATGTAAGCTATCACTGATTTTCTTTCCATaGCGTAAACAGCTCATAAAA +
Preference number: 2 (lower is better)
Translates to: AYPCFAINCIPLAICKLSLIFFP*RKQLIK
Trigger: TTTTATGAGCTGTTTACGGCATGGAAAGAAAATCAG...TGATAGCTTACATATGGCCAAAGGAATACAGTTTATAGCAAAACATGGGTATGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
3UTR-3UTR GCA 90 bp AAGTGTTGTGTGAATATCCTGGAAGTTGTTAAGAGCTATGTTGAAGTGCTAACTCTGATTTTCTTTCCATaGCGTAAACAGCTCATAAAA +
Preference number: 2 (lower is better)
Translates to: KCCVNILEVVKSYVEVLTLIFFP*RKQLIK
Trigger: TTTTATGAGCTGTTTACGGCATGGAAAGAAAATCAG...AGTTAGCACTTCAACATAGCTCTTAACAACTTCCAGGATATTCACACAACACTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
3UTR-3UTR GCA 90 bp CAATTTATTTCGAAAGTCACTCTGAGAACATTGCACTGTGTTTTGCTGGAACAACTGATTTTCTTTCCATaGCGTAAACAGCTCATAAAA +
Preference number: 2 (lower is better)
Translates to: QFISKVTLRTLHCVLLEQLIFFP*RKQLIK
Trigger: TTTTATGAGCTGTTTACGGCATGGAAAGAAAATCAG...TTGTTCCAGCAAAACACAGTGCAATGTTCTCAGAGTGACTTTCGAAATAAATTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
3UTR-3UTR CCA 90 bp GCATACCCATGTTTTGCTATAAACTGTATTCCTTTGGCCATATGTAAGCTATCATTGTTTGTGACATGTTaGTTACATATTGCAGAATGC +
Preference number: 2 (lower is better)
Translates to: AYPCFAINCIPLAICKLSLFVTC*LHIAEC
Trigger: GCATTCTGCAATATGTAACCAACATGTCACAAACAA...TGATAGCTTACATATGGCCAAAGGAATACAGTTTATAGCAAAACATGGGTATGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
3UTR-3UTR GCA 90 bp TCATTTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATCTGATTTTCTTTCCATaGCGTAAACAGCTCATAAAA +
Preference number: 2 (lower is better)
Translates to: SFKCFQCPKNATTKLLSHLIFFP*RKQLIK
Trigger: TTTTATGAGCTGTTTACGGCATGGAAAGAAAATCAG...ATGAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAAATGA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
3UTR GCA 72 bp ATTTTAACCACAGCATGGGTGAGAGAGGGTGCTACCTaGCCCTTTGTCATGTGGACACTGCACCAGGCAGTT +
Preference number: 3 (lower is better)
Translates to: ILTTAWVREGAT*PFVMWTLHQAV
Trigger: AACTGCCTGGTGCAGTGTCCACATGACAAAGGGGCAGGTAGCACCCTCTCTCACCCATGCTGTGGTTAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
3UTR-3UTR CAA 90 bp GGAACGCACAAAGCTAAGAGGTTCTTACGGTCTCAAAAAGCAGTTTTGCCTCTAGTGCTACCTGCCCCTTaGTCATGTGGACACTGCACC +
Preference number: 3 (lower is better)
Translates to: GTHKAKRFLRSQKAVLPLVLPAP*SCGHCT
Trigger: GGTGCAGTGTCCACATGACAAAGGGGCAGGTAGCAC...TAGAGGCAAAACTGCTTTTTGAGACCGTAAGAACCTCTTAGCTTTGTGCGTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
3UTR-3UTR CAA 90 bp TTGTCATGTGGACACTGCACCAGGCAGTTCACAGTCTTTATTATGAGGTCACTGCATGTTGGTTACATATaGCAGAATGCTGAGGTTTGG +
Preference number: 3 (lower is better)
Translates to: LSCGHCTRQFTVFIMRSLHVGYI*QNAEVW
Trigger: CCAAACCTCAGCATTCTGCAATATGTAACCAACATG...CAGTGACCTCATAATAAAGACTGTGAACTGCCTGGTGCAGTGTCCACATGACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
3UTR TCA 72 bp GGCACATGTGCCAGTCTGTTACATGCTGCTTGTTTGTaGCATGTTGGTTACATATTGCAGAATGCTGAGGTT +
Preference number: 3 (lower is better)
Translates to: GTCASLLHAACL*HVGYILQNAEV
Trigger: AACCTCAGCATTCTGCAATATGTAACCAACATGTCACAAACAAGCAGCATGTAACAGACTGGCACATGTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
3UTR GCA 72 bp TACATGCTGCTTGTTTGTGACATGTTGGTTACATATTaGAGAATGCTGAGGTTTGGGCTTCTAGTGAAAGTG +
Preference number: 3 (lower is better)
Translates to: YMLLVCDMLVTY*RMLRFGLLVKV
Trigger: CACTTTCACTAGAAGCCCAAACCTCAGCATTCTGCAATATGTAACCAACATGTCACAAACAAGCAGCATGTA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
3UTR-3UTR CAA 90 bp TGGGCCCAATTTATTTCGAAAGTCACTCTGAGAACATTGCACTGTGTTTTGCTGTTTTCAAAAACAGCCTaGCTCTTTCTGTTACTCCCT +
Preference number: 3 (lower is better)
Translates to: WAQFISKVTLRTLHCVLLFSKTA*LFLLLP
Trigger: AGGGAGTAACAGAAAGAGCAAGGCTGTTTTTGAAAA...CAGCAAAACACAGTGCAATGTTCTCAGAGTGACTTTCGAAATAAATTGGGCCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
3UTR-3UTR CAA 90 bp CTTTCTGGCCACATTGTTGGGTTTTGGTTTACTGTACCATCACATTCAATATTGGTCACTCTGAGAACATaGCACTGTGTTTTGCTGGAA +
Preference number: 3 (lower is better)
Translates to: LSGHIVGFWFTVPSHSILVTLRT*HCVLLE
Trigger: TTCCAGCAAAACACAGTGCAATGTTCTCAGAGTGAC...CAATATTGAATGTGATGGTACAGTAAACCAAAACCCAACAATGTGGCCAGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
3UTR-3UTR CAA 90 bp ATTATTGCTCTTTCTTTCTGGCCACATTGTTGGGTTTTGGTTTACTGTACCATCGTCACTCTGAGAACATaGCACTGTGTTTTGCTGGAA +
Preference number: 3 (lower is better)
Translates to: IIALSFWPHCWVLVYCTIVTLRT*HCVLLE
Trigger: TTCCAGCAAAACACAGTGCAATGTTCTCAGAGTGAC...GATGGTACAGTAAACCAAAACCCAACAATGTGGCCAGAAAGAAAGAGCAATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
3UTR-3UTR CAA 90 bp CTTTCTGGCCACATTGTTGGGTTTTGGTTTACTGTACCATCACATTCAATATTGACATTGCACTGTGTTTaGCTGGAACAAAATCAGGAC +
Preference number: 3 (lower is better)
Translates to: LSGHIVGFWFTVPSHSILTLHCV*LEQNQD
Trigger: GTCCTGATTTTGTTCCAGCAAAACACAGTGCAATGT...CAATATTGAATGTGATGGTACAGTAAACCAAAACCCAACAATGTGGCCAGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
3UTR-3UTR CAA 90 bp CTTTCTGGCCACATTGTTGGGTTTTGGTTTACTGTACCATCACATTCAATATTGACCGAGTTAAAGCTCTaGGGCCCAATTTATTTCGAA +
Preference number: 3 (lower is better)
Translates to: LSGHIVGFWFTVPSHSILTELKL*GPIYFE
Trigger: TTCGAAATAAATTGGGCCCAAGAGCTTTAACTCGGT...CAATATTGAATGTGATGGTACAGTAAACCAAAACCCAACAATGTGGCCAGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
3UTR TCA 72 bp AAAGCTCTTGGGCCCAATTTATTTCGAAAGTCACTCTaGGAACATTGCACTGTGTTTTGCTGGAACAAAATC +
Preference number: 3 (lower is better)
Translates to: KALGPNLFRKSL*EHCTVFCWNKI
Trigger: GATTTTGTTCCAGCAAAACACAGTGCAATGTTCTCAGAGTGACTTTCGAAATAAATTGGGCCCAAGAGCTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
3UTR GCA 72 bp TTTAAATTCAGCTGGCACATGTGCCAGTCTGTTACATaGTGCTTGTTTGTGACATGTTGGTTACATATTGCA +
Preference number: 3 (lower is better)
Translates to: FKFSWHMCQSVT*CLFVTCWLHIA
Trigger: TGCAATATGTAACCAACATGTCACAAACAAGCAGCATGTAACAGACTGGCACATGTGCCAGCTGAATTTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
3UTR-3UTR CAA 90 bp ATTATTGCTCTTTCTTTCTGGCCACATTGTTGGGTTTTGGTTTACTGTACCATCTTTTCAAAAACAGCCTaGCTCTTTCTGTTACTCCCT +
Preference number: 3 (lower is better)
Translates to: IIALSFWPHCWVLVYCTIFSKTA*LFLLLP
Trigger: AGGGAGTAACAGAAAGAGCAAGGCTGTTTTTGAAAA...GATGGTACAGTAAACCAAAACCCAACAATGTGGCCAGAAAGAAAGAGCAATAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
3UTR-3UTR CAA 90 bp CTTTCTGGCCACATTGTTGGGTTTTGGTTTACTGTACCATCACATTCAATATTGTCTGTTACATGCTGCTaGTTTGTGACATGTTGGTTA +
Preference number: 3 (lower is better)
Translates to: LSGHIVGFWFTVPSHSILSVTCC*FVTCWL
Trigger: TAACCAACATGTCACAAACAAGCAGCATGTAACAGA...CAATATTGAATGTGATGGTACAGTAAACCAAAACCCAACAATGTGGCCAGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
3UTR-3UTR CAA 90 bp ATTATTGCTCTTTCTTTCTGGCCACATTGTTGGGTTTTGGTTTACTGTACCATCTCTGTTACATGCTGCTaGTTTGTGACATGTTGGTTA +
Preference number: 3 (lower is better)
Translates to: IIALSFWPHCWVLVYCTISVTCC*FVTCWL
Trigger: TAACCAACATGTCACAAACAAGCAGCATGTAACAGA...GATGGTACAGTAAACCAAAACCCAACAATGTGGCCAGAAAGAAAGAGCAATAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
3UTR TCA 72 bp TTCAAAAACAGCCTTGCTCTTTCTGTTACTCCCTCCTaGTCATTTAAATGTTTCCAGTGTCCGAAAAATGCA +
Preference number: 3 (lower is better)
Translates to: FKNSLALSVTPS*SFKCFQCPKNA
Trigger: TGCATTTTTCGGACACTGGAAACATTTAAATGATCAGGAGGGAGTAACAGAAAGAGCAAGGCTGTTTTTGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
3UTR-3UTR CAA 90 bp CAATTTATTTCGAAAGTCACTCTGAGAACATTGCACTGTGTTTTGCTGGAACAATTTTCAAAAACAGCCTaGCTCTTTCTGTTACTCCCT +
Preference number: 3 (lower is better)
Translates to: QFISKVTLRTLHCVLLEQFSKTA*LFLLLP
Trigger: AGGGAGTAACAGAAAGAGCAAGGCTGTTTTTGAAAA...TTGTTCCAGCAAAACACAGTGCAATGTTCTCAGAGTGACTTTCGAAATAAATTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
3UTR-3UTR CAA 90 bp CTTTCTGGCCACATTGTTGGGTTTTGGTTTACTGTACCATCACATTCAATATTGCTTGTTTGTGACATGTaGGTTACATATTGCAGAATG +
Preference number: 3 (lower is better)
Translates to: LSGHIVGFWFTVPSHSILLVCDM*VTYCRM
Trigger: CATTCTGCAATATGTAACCAACATGTCACAAACAAG...CAATATTGAATGTGATGGTACAGTAAACCAAAACCCAACAATGTGGCCAGAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
3UTR TCA 72 bp CTGTATTTATTACTGGAACGGAAGTTGTCATATCCGTaGTCATTAGCTTTGAACTTTAAGCACGACTGCTTT +
Preference number: 3 (lower is better)
Translates to: LYLLLERKLSYP*SLALNFKHDCF
Trigger: AAAGCAGTCGTGCTTAAAGTTCAAAGCTAATGATCACGGATATGACAACTTCCGTTCCAGTAATAAATACAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645696.1
3UTR CCA 72 bp TTATTGCTCTTTCTTTCTGGCCACATTGTTGGGTTTTaGTTTACTGTACCATCACATTCAATATTGACAGAA +
Preference number: 3 (lower is better)
Translates to: LLLFLSGHIVGF*FTVPSHSILTE
Trigger: TTCTGTCAATATTGAATGTGATGGTACAGTAAACCAAAACCCAACAATGTGGCCAGAAAGAAAGAGCAATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR GCA 90 bp TTGTCATGTGGACACTGCACCAGGCAGTTCACAGTCTTTATTATGAGGTCACTGAGGCACCTCCGCAGGTaGCAACGACCGCGCCAGACT +
Preference number: 4 (lower is better)
Translates to: LSCGHCTRQFTVFIMRSLRHLRR*QRPRQT
Trigger: AGTCTGGCGCGGTCGTTGGCACCTGCGGAGGTGCCT...CAGTGACCTCATAATAAAGACTGTGAACTGCCTGGTGCAGTGTCCACATGACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp TTGTCATGTGGACACTGCACCAGGCAGTTCACAGTCTTTATTATGAGGTCACTGACGGGGGAGGGGAGATaGTGCGTGGCGGAGATCCTG +
Preference number: 4 (lower is better)
Translates to: LSCGHCTRQFTVFIMRSLTGEGR*CVAEIL
Trigger: CAGGATCTCCGCCACGCACCATCTCCCCTCCCCCGT...CAGTGACCTCATAATAAAGACTGTGAACTGCCTGGTGCAGTGTCCACATGACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp TTGTCATGTGGACACTGCACCAGGCAGTTCACAGTCTTTATTATGAGGTCACTGCCGCTACTCCCTGGCTaGCTGAGCTACAGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: LSCGHCTRQFTVFIMRSLPLLPG*LSYSSR
Trigger: GCGGGAGCTGTAGCTCAGCCAGCCAGGGAGTAGCGG...CAGTGACCTCATAATAAAGACTGTGAACTGCCTGGTGCAGTGTCCACATGACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646605.1
CDS-3UTR GCA 90 bp TTGTCATGTGGACACTGCACCAGGCAGTTCACAGTCTTTATTATGAGGTCACTGGAGGCGGCTGCATGCTaGTACCTGCTCCAGAAGGCG +
Preference number: 4 (lower is better)
Translates to: LSCGHCTRQFTVFIMRSLEAAAC*YLLQKA
Trigger: CGCCTTCTGGAGCAGGTAGCAGCATGCAGCCGCCTC...CAGTGACCTCATAATAAAGACTGTGAACTGCCTGGTGCAGTGTCCACATGACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR GCA 90 bp GGAACGCACAAAGCTAAGAGGTTCTTACGGTCTCAAAAAGCAGTTTTGCCTCTAAGGCACCTCCGCAGGTaGCAACGACCGCGCCAGACT +
Preference number: 4 (lower is better)
Translates to: GTHKAKRFLRSQKAVLPLRHLRR*QRPRQT
Trigger: AGTCTGGCGCGGTCGTTGGCACCTGCGGAGGTGCCT...TAGAGGCAAAACTGCTTTTTGAGACCGTAAGAACCTCTTAGCTTTGTGCGTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR GCA 90 bp GGAACGCACAAAGCTAAGAGGTTCTTACGGTCTCAAAAAGCAGTTTTGCCTCTAGAGGCGGCTGCATGCTaGTACCTGCTCCAGAAGGCG +
Preference number: 4 (lower is better)
Translates to: GTHKAKRFLRSQKAVLPLEAAAC*YLLQKA
Trigger: CGCCTTCTGGAGCAGGTAGCAGCATGCAGCCGCCTC...TAGAGGCAAAACTGCTTTTTGAGACCGTAAGAACCTCTTAGCTTTGTGCGTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR GCA 90 bp TGGGCCCAATTTATTTCGAAAGTCACTCTGAGAACATTGCACTGTGTTTTGCTGAGGCACCTCCGCAGGTaGCAACGACCGCGCCAGACT +
Preference number: 4 (lower is better)
Translates to: WAQFISKVTLRTLHCVLLRHLRR*QRPRQT
Trigger: AGTCTGGCGCGGTCGTTGGCACCTGCGGAGGTGCCT...CAGCAAAACACAGTGCAATGTTCTCAGAGTGACTTTCGAAATAAATTGGGCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR GCA 90 bp TTGTCATGTGGACACTGCACCAGGCAGTTCACAGTCTTTATTATGAGGTCACTGGCGTGGCGGAGATCCTaGCGTCCTGTCTCCTTTAGG +
Preference number: 4 (lower is better)
Translates to: LSCGHCTRQFTVFIMRSLAWRRS*RPVSFR
Trigger: CCTAAAGGAGACAGGACGGCAGGATCTCCGCCACGC...CAGTGACCTCATAATAAAGACTGTGAACTGCCTGGTGCAGTGTCCACATGACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp GGAACGCACAAAGCTAAGAGGTTCTTACGGTCTCAAAAAGCAGTTTTGCCTCTAAGGGGAGATGGTGCGTaGCGGAGATCCTGCCGTCCT +
Preference number: 4 (lower is better)
Translates to: GTHKAKRFLRSQKAVLPLRGDGA*RRSCRP
Trigger: AGGACGGCAGGATCTCCGCCACGCACCATCTCCCCT...TAGAGGCAAAACTGCTTTTTGAGACCGTAAGAACCTCTTAGCTTTGTGCGTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp TTGTCATGTGGACACTGCACCAGGCAGTTCACAGTCTTTATTATGAGGTCACTGATCTCGATGGGTCCTTaGCACGGGGGAGGGGAGATG +
Preference number: 4 (lower is better)
Translates to: LSCGHCTRQFTVFIMRSLISMGP*HGGGEM
Trigger: CATCTCCCCTCCCCCGTGCCAAGGACCCATCGAGAT...CAGTGACCTCATAATAAAGACTGTGAACTGCCTGGTGCAGTGTCCACATGACAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR GCA 90 bp GGAACGCACAAAGCTAAGAGGTTCTTACGGTCTCAAAAAGCAGTTTTGCCTCTACTGCATGCTGCTACCTaGTCCAGAAGGCGTCCGGTG +
Preference number: 4 (lower is better)
Translates to: GTHKAKRFLRSQKAVLPLLHAAT*SRRRPV
Trigger: CACCGGACGCCTTCTGGAGCAGGTAGCAGCATGCAG...TAGAGGCAAAACTGCTTTTTGAGACCGTAAGAACCTCTTAGCTTTGTGCGTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR GCA 90 bp GGAACGCACAAAGCTAAGAGGTTCTTACGGTCTCAAAAAGCAGTTTTGCCTCTAGCGTGGCGGAGATCCTaGCGTCCTGTCTCCTTTAGG +
Preference number: 4 (lower is better)
Translates to: GTHKAKRFLRSQKAVLPLAWRRS*RPVSFR
Trigger: CCTAAAGGAGACAGGACGGCAGGATCTCCGCCACGC...TAGAGGCAAAACTGCTTTTTGAGACCGTAAGAACCTCTTAGCTTTGTGCGTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp AGGCAGTTCACAGTCTTTATTATGAGGTCACTGGCATCTCTCCATCGTAAAGCTATCTCGATGGGTCCTTaGCACGGGGGAGGGGAGATG +
Preference number: 4 (lower is better)
Translates to: RQFTVFIMRSLASLHRKAISMGP*HGGGEM
Trigger: CATCTCCCCTCCCCCGTGCCAAGGACCCATCGAGAT...AGCTTTACGATGGAGAGATGCCAGTGACCTCATAATAAAGACTGTGAACTGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp TTGTCATGTGGACACTGCACCAGGCAGTTCACAGTCTTTATTATGAGGTCACTGGGGAATCTGTCCCCATaGGTTTCCTCCAACCCCACC +
Preference number: 4 (lower is better)
Translates to: LSCGHCTRQFTVFIMRSLGNLSP*VSSNPT
Trigger: GGTGGGGTTGGAGGAAACCCATGGGGACAGATTCCC...CAGTGACCTCATAATAAAGACTGTGAACTGCCTGGTGCAGTGTCCACATGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR TCA 90 bp TTGTCATGTGGACACTGCACCAGGCAGTTCACAGTCTTTATTATGAGGTCACTGGTGTGGAGTTCCCGATaGTCCCCAGCACGAACACAA +
Preference number: 4 (lower is better)
Translates to: LSCGHCTRQFTVFIMRSLVWSSR*SPARTQ
Trigger: TTGTGTTCGTGCTGGGGATCATCGGGAACTCCACAC...CAGTGACCTCATAATAAAGACTGTGAACTGCCTGGTGCAGTGTCCACATGACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR TCA 90 bp TTGTCATGTGGACACTGCACCAGGCAGTTCACAGTCTTTATTATGAGGTCACTGTCCATCGTAAAGCTATaGGCACAGGGCCTGCCCTCA +
Preference number: 4 (lower is better)
Translates to: LSCGHCTRQFTVFIMRSLSIVKL*AQGLPS
Trigger: TGAGGGCAGGCCCTGTGCTCATAGCTTTACGATGGA...CAGTGACCTCATAATAAAGACTGTGAACTGCCTGGTGCAGTGTCCACATGACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR TCA 90 bp AAGTGTAATGATTTTCAAAAACAGCCTTGCTCTTTCTGTTACTCCCTCCTGATCACTCCTCCCGGCGGATaGAAGCCGCTACTCCCTGGC +
Preference number: 4 (lower is better)
Translates to: KCNDFQKQPCSFCYSLLITPPGG*KPLLPG
Trigger: GCCAGGGAGTAGCGGCTTTCATCCGCCGGGAGGAGT...GATCAGGAGGGAGTAACAGAAAGAGCAAGGCTGTTTTTGAAAATCATTACACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000475537.2
ENST00000646605.1
CDS-3UTR GCA 90 bp TGGGCCCAATTTATTTCGAAAGTCACTCTGAGAACATTGCACTGTGTTTTGCTGCTGCATGCTGCTACCTaGTCCAGAAGGCGTCCGGTG +
Preference number: 4 (lower is better)
Translates to: WAQFISKVTLRTLHCVLLLHAAT*SRRRPV
Trigger: CACCGGACGCCTTCTGGAGCAGGTAGCAGCATGCAG...CAGCAAAACACAGTGCAATGTTCTCAGAGTGACTTTCGAAATAAATTGGGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR GCA 90 bp AAGTGTAATGATTTTCAAAAACAGCCTTGCTCTTTCTGTTACTCCCTCCTGATCAGGCACCTCCGCAGGTaGCAACGACCGCGCCAGACT +
Preference number: 4 (lower is better)
Translates to: KCNDFQKQPCSFCYSLLIRHLRR*QRPRQT
Trigger: AGTCTGGCGCGGTCGTTGGCACCTGCGGAGGTGCCT...GATCAGGAGGGAGTAACAGAAAGAGCAAGGCTGTTTTTGAAAATCATTACACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR GCA 90 bp AAGTGTAATGATTTTCAAAAACAGCCTTGCTCTTTCTGTTACTCCCTCCTGATCCAGCGCGCCCAGGAGTaGGCCGGAGATTCGGAAACC +
Preference number: 4 (lower is better)
Translates to: KCNDFQKQPCSFCYSLLIQRAQE*AGDSET
Trigger: GGTTTCCGAATCTCCGGCGCACTCCTGGGCGCGCTG...GATCAGGAGGGAGTAACAGAAAGAGCAAGGCTGTTTTTGAAAATCATTACACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000475537.2
ENST00000646605.1
CDS-3UTR CCA 90 bp AGGCAGTTCACAGTCTTTATTATGAGGTCACTGGCATCTCTCCATCGTAAAGCTTTTGCAAAAGCGGAGTaGCCCTGTCAGGCGGGAAGC +
Preference number: 4 (lower is better)
Translates to: RQFTVFIMRSLASLHRKAFAKAE*PCQAGS
Trigger: GCTTCCCGCCTGACAGGGCCACTCCGCTTTTGCAAA...AGCTTTACGATGGAGAGATGCCAGTGACCTCATAATAAAGACTGTGAACTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp TGGGCCCAATTTATTTCGAAAGTCACTCTGAGAACATTGCACTGTGTTTTGCTGGCGCCAGACTGGCGTTaGAACCCTTGGGCCATAAGG +
Preference number: 4 (lower is better)
Translates to: WAQFISKVTLRTLHCVLLAPDWR*NPWAIR
Trigger: CCTTATGGCCCAAGGGTTCCAACGCCAGTCTGGCGC...CAGCAAAACACAGTGCAATGTTCTCAGAGTGACTTTCGAAATAAATTGGGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp GGAACGCACAAAGCTAAGAGGTTCTTACGGTCTCAAAAAGCAGTTTTGCCTCTAGGGAATCTGTCCCCATaGGTTTCCTCCAACCCCACC +
Preference number: 4 (lower is better)
Translates to: GTHKAKRFLRSQKAVLPLGNLSP*VSSNPT
Trigger: GGTGGGGTTGGAGGAAACCCATGGGGACAGATTCCC...TAGAGGCAAAACTGCTTTTTGAGACCGTAAGAACCTCTTAGCTTTGTGCGTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR TCA 90 bp AGGCAGTTCACAGTCTTTATTATGAGGTCACTGGCATCTCTCCATCGTAAAGCTTCCATCGTAAAGCTATaGGCACAGGGCCTGCCCTCA +
Preference number: 4 (lower is better)
Translates to: RQFTVFIMRSLASLHRKASIVKL*AQGLPS
Trigger: TGAGGGCAGGCCCTGTGCTCATAGCTTTACGATGGA...AGCTTTACGATGGAGAGATGCCAGTGACCTCATAATAAAGACTGTGAACTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR TCA 90 bp CAATTTATTTCGAAAGTCACTCTGAGAACATTGCACTGTGTTTTGCTGGAACAAACTCCTCCCGGCGGATaGAAGCCGCTACTCCCTGGC +
Preference number: 4 (lower is better)
Translates to: QFISKVTLRTLHCVLLEQTPPGG*KPLLPG
Trigger: GCCAGGGAGTAGCGGCTTTCATCCGCCGGGAGGAGT...TTGTTCCAGCAAAACACAGTGCAATGTTCTCAGAGTGACTTTCGAAATAAATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646605.1
CDS-3UTR GCA 90 bp GCATACCCATGTTTTGCTATAAACTGTATTCCTTTGGCCATATGTAAGCTATCAGCCTTCCGACCCCGCTaGAACCTTTCCCCTTGGGCG +
Preference number: 4 (lower is better)
Translates to: AYPCFAINCIPLAICKLSAFRPR*NLSPWA
Trigger: CGCCCAAGGGGAAAGGTTGCAGCGGGGTCGGAAGGC...TGATAGCTTACATATGGCCAAAGGAATACAGTTTATAGCAAAACATGGGTATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377211.8
CDS-3UTR GCA 90 bp TTGTCATGTGGACACTGCACCAGGCAGTTCACAGTCTTTATTATGAGGTCACTGATGTCAATGACGATGTaGAGCAGGTCTCCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: LSCGHCTRQFTVFIMRSLMSMTM*SRSPRA
Trigger: GGCTCTGGGAGACCTGCTGCACATCGTCATTGACAT...CAGTGACCTCATAATAAAGACTGTGAACTGCCTGGTGCAGTGTCCACATGACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR GCA 90 bp AGGCAGTTCACAGTCTTTATTATGAGGTCACTGGCATCTCTCCATCGTAAAGCTATGCCTACCTGGGAGTaGTCTCAGGATCCACGTTGC +
Preference number: 4 (lower is better)
Translates to: RQFTVFIMRSLASLHRKAMPTWE*SQDPRC
Trigger: GCAACGTGGATCCTGAGAGCACTCCCAGGTAGGCAT...AGCTTTACGATGGAGAGATGCCAGTGACCTCATAATAAAGACTGTGAACTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646948.1
CDS-3UTR CCA 90 bp TTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATTTGCGAGGCGGAACCCAGCTaGGTTCCAGCCTGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: LNVSSVRKMQQLNCSLICEAEPS*VPACSG
Trigger: CCCAGAGCAGGCTGGAACCCAGCTGGGTTCCGCCTC...GCAAATGAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377211.8
CDS-3UTR CCA 90 bp AAGTGTAATGATTTTCAAAAACAGCCTTGCTCTTTCTGTTACTCCCTCCTGATCGCGTCCGCACAGACTTaGAGGCGGCTGCATGCTGCT +
Preference number: 4 (lower is better)
Translates to: KCNDFQKQPCSFCYSLLIASAQT*RRLHAA
Trigger: AGCAGCATGCAGCCGCCTCCAAGTCTGTGCGGACGC...GATCAGGAGGGAGTAACAGAAAGAGCAAGGCTGTTTTTGAAAATCATTACACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp CTTTCTGGCCACATTGTTGGGTTTTGGTTTACTGTACCATCACATTCAATATTGGCGTCCGCACAGACTTaGAGGCGGCTGCATGCTGCT +
Preference number: 4 (lower is better)
Translates to: LSGHIVGFWFTVPSHSILASAQT*RRLHAA
Trigger: AGCAGCATGCAGCCGCCTCCAAGTCTGTGCGGACGC...CAATATTGAATGTGATGGTACAGTAAACCAAAACCCAACAATGTGGCCAGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp GATCATTTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCACGACCGCGCCAGACTaGCGTTGGAACCCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: DHLNVSSVRKMQQLNCSLTTAPD*RWNPWA
Trigger: GGCCCAAGGGTTCCAACGCCAGTCTGGCGCGGTCGT...GAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAAATGATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp AAGTGTTGTGTGAATATCCTGGAAGTTGTTAAGAGCTATGTTGAAGTGCTAACTACGACCGCGCCAGACTaGCGTTGGAACCCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: KCCVNILEVVKSYVEVLTTTAPD*RWNPWA
Trigger: GGCCCAAGGGTTCCAACGCCAGTCTGGCGCGGTCGT...AGTTAGCACTTCAACATAGCTCTTAACAACTTCCAGGATATTCACACAACACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp TTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATTTGCACGACCGCGCCAGACTaGCGTTGGAACCCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: LNVSSVRKMQQLNCSLICTTAPD*RWNPWA
Trigger: GGCCCAAGGGTTCCAACGCCAGTCTGGCGCGGTCGT...GCAAATGAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp AAGTGTAATGATTTTCAAAAACAGCCTTGCTCTTTCTGTTACTCCCTCCTGATCAGGGGAGATGGTGCGTaGCGGAGATCCTGCCGTCCT +
Preference number: 4 (lower is better)
Translates to: KCNDFQKQPCSFCYSLLIRGDGA*RRSCRP
Trigger: AGGACGGCAGGATCTCCGCCACGCACCATCTCCCCT...GATCAGGAGGGAGTAACAGAAAGAGCAAGGCTGTTTTTGAAAATCATTACACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp ATTATTGCTCTTTCTTTCTGGCCACATTGTTGGGTTTTGGTTTACTGTACCATCAGGGGAGATGGTGCGTaGCGGAGATCCTGCCGTCCT +
Preference number: 4 (lower is better)
Translates to: IIALSFWPHCWVLVYCTIRGDGA*RRSCRP
Trigger: AGGACGGCAGGATCTCCGCCACGCACCATCTCCCCT...GATGGTACAGTAAACCAAAACCCAACAATGTGGCCAGAAAGAAAGAGCAATAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp GCATACCCATGTTTTGCTATAAACTGTATTCCTTTGGCCATATGTAAGCTATCAACGGGGGAGGGGAGATaGTGCGTGGCGGAGATCCTG +
Preference number: 4 (lower is better)
Translates to: AYPCFAINCIPLAICKLSTGEGR*CVAEIL
Trigger: CAGGATCTCCGCCACGCACCATCTCCCCTCCCCCGT...TGATAGCTTACATATGGCCAAAGGAATACAGTTTATAGCAAAACATGGGTATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp GATCATTTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCACGGGGGAGGGGAGATaGTGCGTGGCGGAGATCCTG +
Preference number: 4 (lower is better)
Translates to: DHLNVSSVRKMQQLNCSLTGEGR*CVAEIL
Trigger: CAGGATCTCCGCCACGCACCATCTCCCCTCCCCCGT...GAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAAATGATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp TTGTCATGTGGACACTGCACCAGGCAGTTCACAGTCTTTATTATGAGGTCACTGTGCCCCTTTGTCATGTaGACACTGCACCAGGCAGTT +
Preference number: 4 (lower is better)
Translates to: LSCGHCTRQFTVFIMRSLCPFVM*TLHQAV
Trigger: AACTGCCTGGTGCAGTGTCCACATGACAAAGGGGCA...CAGTGACCTCATAATAAAGACTGTGAACTGCCTGGTGCAGTGTCCACATGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp GATCATTTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCCCGCTACTCCCTGGCTaGCTGAGCTACAGCTCCCGC +
Preference number: 4 (lower is better)
Translates to: DHLNVSSVRKMQQLNCSLPLLPG*LSYSSR
Trigger: GCGGGAGCTGTAGCTCAGCCAGCCAGGGAGTAGCGG...GAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAAATGATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000475537.2
ENST00000646605.1
CDS-3UTR TCA 90 bp AAGTGTTGTGTGAATATCCTGGAAGTTGTTAAGAGCTATGTTGAAGTGCTAACTAGGCGGGTCCGGCTCTaGCGAAACGCTGCGAGAATG +
Preference number: 4 (lower is better)
Translates to: KCCVNILEVVKSYVEVLTRRVRL*RNAARM
Trigger: CATTCTCGCAGCGTTTCGTCAGAGCCGGACCCGCCT...AGTTAGCACTTCAACATAGCTCTTAACAACTTCCAGGATATTCACACAACACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377211.8
CDS-3UTR GCA 90 bp AGGCAGTTCACAGTCTTTATTATGAGGTCACTGGCATCTCTCCATCGTAAAGCTGCTCTGACGAAACGCTaGGAGAATGCCAGACAGTGT +
Preference number: 4 (lower is better)
Translates to: RQFTVFIMRSLASLHRKAALTKR*ENARQC
Trigger: ACACTGTCTGGCATTCTCGCAGCGTTTCGTCAGAGC...AGCTTTACGATGGAGAGATGCCAGTGACCTCATAATAAAGACTGTGAACTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377211.8
CDS-3UTR GCA 90 bp GCATACCCATGTTTTGCTATAAACTGTATTCCTTTGGCCATATGTAAGCTATCAGAGGCGGCTGCATGCTaGTACCTGCTCCAGAAGGCG +
Preference number: 4 (lower is better)
Translates to: AYPCFAINCIPLAICKLSEAAAC*YLLQKA
Trigger: CGCCTTCTGGAGCAGGTAGCAGCATGCAGCCGCCTC...TGATAGCTTACATATGGCCAAAGGAATACAGTTTATAGCAAAACATGGGTATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR GCA 90 bp AAGTGTTGTGTGAATATCCTGGAAGTTGTTAAGAGCTATGTTGAAGTGCTAACTGAGGCGGCTGCATGCTaGTACCTGCTCCAGAAGGCG +
Preference number: 4 (lower is better)
Translates to: KCCVNILEVVKSYVEVLTEAAAC*YLLQKA
Trigger: CGCCTTCTGGAGCAGGTAGCAGCATGCAGCCGCCTC...AGTTAGCACTTCAACATAGCTCTTAACAACTTCCAGGATATTCACACAACACTT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR GCA 90 bp TTGTCATGTGGACACTGCACCAGGCAGTTCACAGTCTTTATTATGAGGTCACTGATTATCTCTGCGGTTTaGAAAAGCGGAGTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: LSCGHCTRQFTVFIMRSLIISAV*KSGVAL
Trigger: CAGGGCCACTCCGCTTTTGCAAACCGCAGAGATAAT...CAGTGACCTCATAATAAAGACTGTGAACTGCCTGGTGCAGTGTCCACATGACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR GCA 90 bp TCATTTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATAGGCACCTCCGCAGGTaGCAACGACCGCGCCAGACT +
Preference number: 4 (lower is better)
Translates to: SFKCFQCPKNATTKLLSHRHLRR*QRPRQT
Trigger: AGTCTGGCGCGGTCGTTGGCACCTGCGGAGGTGCCT...ATGAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAAATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR GCA 90 bp AGGCAGTTCACAGTCTTTATTATGAGGTCACTGGCATCTCTCCATCGTAAAGCTATGTCAATGACGATGTaGAGCAGGTCTCCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: RQFTVFIMRSLASLHRKAMSMTM*SRSPRA
Trigger: GGCTCTGGGAGACCTGCTGCACATCGTCATTGACAT...AGCTTTACGATGGAGAGATGCCAGTGACCTCATAATAAAGACTGTGAACTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR GCA 90 bp GGAACGCACAAAGCTAAGAGGTTCTTACGGTCTCAAAAAGCAGTTTTGCCTCTAAGAGAGGGTGCTACCTaGCCCTTTGTCATGTGGACA +
Preference number: 4 (lower is better)
Translates to: GTHKAKRFLRSQKAVLPLREGAT*PFVMWT
Trigger: TGTCCACATGACAAAGGGGCAGGTAGCACCCTCTCT...TAGAGGCAAAACTGCTTTTTGAGACCGTAAGAACCTCTTAGCTTTGTGCGTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR GCA 90 bp TCATTTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATCAGCGCGCCCAGGAGTaGGCCGGAGATTCGGAAACC +
Preference number: 4 (lower is better)
Translates to: SFKCFQCPKNATTKLLSHQRAQE*AGDSET
Trigger: GGTTTCCGAATCTCCGGCGCACTCCTGGGCGCGCTG...ATGAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAAATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000475537.2
ENST00000646605.1
CDS-3UTR CCA 90 bp TTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATTTGCCCAGAAGGCGTCCGGTaGCCGCTCCGCAGTTTCAGA +
Preference number: 4 (lower is better)
Translates to: LNVSSVRKMQQLNCSLICPEGVR*PLRSFR
Trigger: TCTGAAACTGCGGAGCGGCCACCGGACGCCTTCTGG...GCAAATGAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp AAGTGTTGTGTGAATATCCTGGAAGTTGTTAAGAGCTATGTTGAAGTGCTAACTGCGTCCGCACAGACTTaGAGGCGGCTGCATGCTGCT +
Preference number: 4 (lower is better)
Translates to: KCCVNILEVVKSYVEVLTASAQT*RRLHAA
Trigger: AGCAGCATGCAGCCGCCTCCAAGTCTGTGCGGACGC...AGTTAGCACTTCAACATAGCTCTTAACAACTTCCAGGATATTCACACAACACTT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp AAGTGTTGTGTGAATATCCTGGAAGTTGTTAAGAGCTATGTTGAAGTGCTAACTAGGGGAGATGGTGCGTaGCGGAGATCCTGCCGTCCT +
Preference number: 4 (lower is better)
Translates to: KCCVNILEVVKSYVEVLTRGDGA*RRSCRP
Trigger: AGGACGGCAGGATCTCCGCCACGCACCATCTCCCCT...AGTTAGCACTTCAACATAGCTCTTAACAACTTCCAGGATATTCACACAACACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp GCATACCCATGTTTTGCTATAAACTGTATTCCTTTGGCCATATGTAAGCTATCAAGGGGAGATGGTGCGTaGCGGAGATCCTGCCGTCCT +
Preference number: 4 (lower is better)
Translates to: AYPCFAINCIPLAICKLSRGDGA*RRSCRP
Trigger: AGGACGGCAGGATCTCCGCCACGCACCATCTCCCCT...TGATAGCTTACATATGGCCAAAGGAATACAGTTTATAGCAAAACATGGGTATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp TCATTTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATACGGGGGAGGGGAGATaGTGCGTGGCGGAGATCCTG +
Preference number: 4 (lower is better)
Translates to: SFKCFQCPKNATTKLLSHTGEGR*CVAEIL
Trigger: CAGGATCTCCGCCACGCACCATCTCCCCTCCCCCGT...ATGAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAAATGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp CTTTCTGGCCACATTGTTGGGTTTTGGTTTACTGTACCATCACATTCAATATTGATCTCGATGGGTCCTTaGCACGGGGGAGGGGAGATG +
Preference number: 4 (lower is better)
Translates to: LSGHIVGFWFTVPSHSILISMGP*HGGGEM
Trigger: CATCTCCCCTCCCCCGTGCCAAGGACCCATCGAGAT...CAATATTGAATGTGATGGTACAGTAAACCAAAACCCAACAATGTGGCCAGAAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp GGAACGCACAAAGCTAAGAGGTTCTTACGGTCTCAAAAAGCAGTTTTGCCTCTACTCCCAGAGCCAAGCTaGCGATCAAGATATTGGGAC +
Preference number: 4 (lower is better)
Translates to: GTHKAKRFLRSQKAVLPLLPEPS*RSRYWD
Trigger: GTCCCAATATCTTGATCGCCAGCTTGGCTCTGGGAG...TAGAGGCAAAACTGCTTTTTGAGACCGTAAGAACCTCTTAGCTTTGTGCGTTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp AGGCAGTTCACAGTCTTTATTATGAGGTCACTGGCATCTCTCCATCGTAAAGCTGGCAAAAGACGGTTTTaGCCACTTCCCGTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: RQFTVFIMRSLASLHRKAGKRRF*PLPVSA
Trigger: AGCAGAGACGGGAAGTGGCCAAAACCGTCTTTTGCC...AGCTTTACGATGGAGAGATGCCAGTGACCTCATAATAAAGACTGTGAACTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR TCA 90 bp TTGTCATGTGGACACTGCACCAGGCAGTTCACAGTCTTTATTATGAGGTCACTGCCTTTTGCATTGATGTaGCGAGGCAATGACGAACGT +
Preference number: 4 (lower is better)
Translates to: LSCGHCTRQFTVFIMRSLPFALM*RGNDER
Trigger: ACGTTCGTCATTGCCTCGTCACATCAATGCAAAAGG...CAGTGACCTCATAATAAAGACTGTGAACTGCCTGGTGCAGTGTCCACATGACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR TCA 90 bp TCATTTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATGAAACTTGGCGCTCATaGCTCGCCAGCGCGGGTCGA +
Preference number: 4 (lower is better)
Translates to: SFKCFQCPKNATTKLLSHETWRS*LASAGR
Trigger: TCGACCCGCGCTGGCGAGTCATGAGCGCCAAGTTTC...ATGAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAAATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646607.2
CDS-3UTR GCA 90 bp AAGTGTTGTGTGAATATCCTGGAAGTTGTTAAGAGCTATGTTGAAGTGCTAACTGTAGCCTCCACCGTTTaGTCGGGGTCTCTGCTGCCA +
Preference number: 4 (lower is better)
Translates to: KCCVNILEVVKSYVEVLTVASTV*SGSLLP
Trigger: TGGCAGCAGAGACCCCGAGCAAACGGTGGAGGCTAC...AGTTAGCACTTCAACATAGCTCTTAACAACTTCCAGGATATTCACACAACACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377211.8
CDS-3UTR GCA 90 bp GCATACCCATGTTTTGCTATAAACTGTATTCCTTTGGCCATATGTAAGCTATCACTGCATGCTGCTACCTaGTCCAGAAGGCGTCCGGTG +
Preference number: 4 (lower is better)
Translates to: AYPCFAINCIPLAICKLSLHAAT*SRRRPV
Trigger: CACCGGACGCCTTCTGGAGCAGGTAGCAGCATGCAG...TGATAGCTTACATATGGCCAAAGGAATACAGTTTATAGCAAAACATGGGTATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR GCA 90 bp TTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATTTGCCTGCATGCTGCTACCTaGTCCAGAAGGCGTCCGGTG +
Preference number: 4 (lower is better)
Translates to: LNVSSVRKMQQLNCSLICLHAAT*SRRRPV
Trigger: CACCGGACGCCTTCTGGAGCAGGTAGCAGCATGCAG...GCAAATGAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR GCA 90 bp TCATTTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATGAGGCGGCTGCATGCTaGTACCTGCTCCAGAAGGCG +
Preference number: 4 (lower is better)
Translates to: SFKCFQCPKNATTKLLSHEAAAC*YLLQKA
Trigger: CGCCTTCTGGAGCAGGTAGCAGCATGCAGCCGCCTC...ATGAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAAATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR GCA 90 bp GATCATTTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCGCGTGGCGGAGATCCTaGCGTCCTGTCTCCTTTAGG +
Preference number: 4 (lower is better)
Translates to: DHLNVSSVRKMQQLNCSLAWRRS*RPVSFR
Trigger: CCTAAAGGAGACAGGACGGCAGGATCTCCGCCACGC...GAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAAATGATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR GCA 90 bp GCATACCCATGTTTTGCTATAAACTGTATTCCTTTGGCCATATGTAAGCTATCAGCGTGGCGGAGATCCTaGCGTCCTGTCTCCTTTAGG +
Preference number: 4 (lower is better)
Translates to: AYPCFAINCIPLAICKLSAWRRS*RPVSFR
Trigger: CCTAAAGGAGACAGGACGGCAGGATCTCCGCCACGC...TGATAGCTTACATATGGCCAAAGGAATACAGTTTATAGCAAAACATGGGTATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR GCA 90 bp TGGGCCCAATTTATTTCGAAAGTCACTCTGAGAACATTGCACTGTGTTTTGCTGATGTCAATGACGATGTaGAGCAGGTCTCCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: WAQFISKVTLRTLHCVLLMSMTM*SRSPRA
Trigger: GGCTCTGGGAGACCTGCTGCACATCGTCATTGACAT...CAGCAAAACACAGTGCAATGTTCTCAGAGTGACTTTCGAAATAAATTGGGCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR GCA 90 bp AGGCAGTTCACAGTCTTTATTATGAGGTCACTGGCATCTCTCCATCGTAAAGCTTTGTCATGTGGACACTaGACCAGGCAGTTCACAGTC +
Preference number: 4 (lower is better)
Translates to: RQFTVFIMRSLASLHRKALSCGH*TRQFTV
Trigger: GACTGTGAACTGCCTGGTGCAGTGTCCACATGACAA...AGCTTTACGATGGAGAGATGCCAGTGACCTCATAATAAAGACTGTGAACTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR GCA 90 bp TTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATTTGCGACACTTGGGTCAGCTaGCCGAGCCAAGTCGCTGCA +
Preference number: 4 (lower is better)
Translates to: LNVSSVRKMQQLNCSLICDTWVS*PSQVAA
Trigger: TGCAGCGACTTGGCTCGGGCAGCTGACCCAAGTGTC...GCAAATGAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646607.2
CDS-3UTR GCA 90 bp TGGGCCCAATTTATTTCGAAAGTCACTCTGAGAACATTGCACTGTGTTTTGCTGTCAAGCTCTGCATTTTaGCCCGCAGGGGAACCTCTA +
Preference number: 4 (lower is better)
Translates to: WAQFISKVTLRTLHCVLLSSSAF*PAGEPL
Trigger: TAGAGGTTCCCCTGCGGGGCAAAATGCAGAGCTTGA...CAGCAAAACACAGTGCAATGTTCTCAGAGTGACTTTCGAAATAAATTGGGCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000646605.1
CDS-3UTR CCA 90 bp TCATTTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATGCGTCCGCACAGACTTaGAGGCGGCTGCATGCTGCT +
Preference number: 4 (lower is better)
Translates to: SFKCFQCPKNATTKLLSHASAQT*RRLHAA
Trigger: AGCAGCATGCAGCCGCCTCCAAGTCTGTGCGGACGC...ATGAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAAATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp CTTTCTGGCCACATTGTTGGGTTTTGGTTTACTGTACCATCACATTCAATATTGTTTGCAAAAGCGGAGTaGCCCTGTCAGGCGGGAAGC +
Preference number: 4 (lower is better)
Translates to: LSGHIVGFWFTVPSHSILFAKAE*PCQAGS
Trigger: GCTTCCCGCCTGACAGGGCCACTCCGCTTTTGCAAA...CAATATTGAATGTGATGGTACAGTAAACCAAAACCCAACAATGTGGCCAGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp AAGTGTTGTGTGAATATCCTGGAAGTTGTTAAGAGCTATGTTGAAGTGCTAACTGCGCCAGACTGGCGTTaGAACCCTTGGGCCATAAGG +
Preference number: 4 (lower is better)
Translates to: KCCVNILEVVKSYVEVLTAPDWR*NPWAIR
Trigger: CCTTATGGCCCAAGGGTTCCAACGCCAGTCTGGCGC...AGTTAGCACTTCAACATAGCTCTTAACAACTTCCAGGATATTCACACAACACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp GATCATTTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCGCGCCAGACTGGCGTTaGAACCCTTGGGCCATAAGG +
Preference number: 4 (lower is better)
Translates to: DHLNVSSVRKMQQLNCSLAPDWR*NPWAIR
Trigger: CCTTATGGCCCAAGGGTTCCAACGCCAGTCTGGCGC...GAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAAATGATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp TTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATTTGCGCGCCAGACTGGCGTTaGAACCCTTGGGCCATAAGG +
Preference number: 4 (lower is better)
Translates to: LNVSSVRKMQQLNCSLICAPDWR*NPWAIR
Trigger: CCTTATGGCCCAAGGGTTCCAACGCCAGTCTGGCGC...GCAAATGAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp AAGTGTTGTGTGAATATCCTGGAAGTTGTTAAGAGCTATGTTGAAGTGCTAACTATCTCGATGGGTCCTTaGCACGGGGGAGGGGAGATG +
Preference number: 4 (lower is better)
Translates to: KCCVNILEVVKSYVEVLTISMGP*HGGGEM
Trigger: CATCTCCCCTCCCCCGTGCCAAGGACCCATCGAGAT...AGTTAGCACTTCAACATAGCTCTTAACAACTTCCAGGATATTCACACAACACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp GCATACCCATGTTTTGCTATAAACTGTATTCCTTTGGCCATATGTAAGCTATCAATCTCGATGGGTCCTTaGCACGGGGGAGGGGAGATG +
Preference number: 4 (lower is better)
Translates to: AYPCFAINCIPLAICKLSISMGP*HGGGEM
Trigger: CATCTCCCCTCCCCCGTGCCAAGGACCCATCGAGAT...TGATAGCTTACATATGGCCAAAGGAATACAGTTTATAGCAAAACATGGGTATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp TTGTCATGTGGACACTGCACCAGGCAGTTCACAGTCTTTATTATGAGGTCACTGTGGCGATCAAGATATTaGGACCGTTTCGCATGCACT +
Preference number: 4 (lower is better)
Translates to: LSCGHCTRQFTVFIMRSLWRSRY*DRFACT
Trigger: AGTGCATGCGAAACGGTCCCAATATCTTGATCGCCA...CAGTGACCTCATAATAAAGACTGTGAACTGCCTGGTGCAGTGTCCACATGACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp TGGGCCCAATTTATTTCGAAAGTCACTCTGAGAACATTGCACTGTGTTTTGCTGGGCAAAAGACGGTTTTaGCCACTTCCCGTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: WAQFISKVTLRTLHCVLLGKRRF*PLPVSA
Trigger: AGCAGAGACGGGAAGTGGCCAAAACCGTCTTTTGCC...CAGCAAAACACAGTGCAATGTTCTCAGAGTGACTTTCGAAATAAATTGGGCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp AAGTGTAATGATTTTCAAAAACAGCCTTGCTCTTTCTGTTACTCCCTCCTGATCAAAGCCGCTACTCCCTaGCTGGCTGAGCTACAGCTC +
Preference number: 4 (lower is better)
Translates to: KCNDFQKQPCSFCYSLLIKAATP*LAELQL
Trigger: GAGCTGTAGCTCAGCCAGCCAGGGAGTAGCGGCTTT...GATCAGGAGGGAGTAACAGAAAGAGCAAGGCTGTTTTTGAAAATCATTACACTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000475537.2
ENST00000646605.1
CDS-3UTR CCA 90 bp CTTTCTGGCCACATTGTTGGGTTTTGGTTTACTGTACCATCACATTCAATATTGGGAAGACAGGACACTTaGGTCAGCTGCCCGAGCCAA +
Preference number: 4 (lower is better)
Translates to: LSGHIVGFWFTVPSHSILGRQDT*VSCPSQ
Trigger: TTGGCTCGGGCAGCTGACCCAAGTGTCCTGTCTTCC...CAATATTGAATGTGATGGTACAGTAAACCAAAACCCAACAATGTGGCCAGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646607.2
CDS-3UTR TCA 90 bp GATCATTTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCGCTTCAGAATCCTGCTaGGGTGAAGGGGAAGCCAGC +
Preference number: 4 (lower is better)
Translates to: DHLNVSSVRKMQQLNCSLASESC*GEGEAS
Trigger: GCTGGCTTCCCCTTCACCTCAGCAGGATTCTGAAGC...GAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAAATGATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR TCA 90 bp AAGTGTTGTGTGAATATCCTGGAAGTTGTTAAGAGCTATGTTGAAGTGCTAACTGCTTCAGAATCCTGCTaGGGTGAAGGGGAAGCCAGC +
Preference number: 4 (lower is better)
Translates to: KCCVNILEVVKSYVEVLTASESC*GEGEAS
Trigger: GCTGGCTTCCCCTTCACCTCAGCAGGATTCTGAAGC...AGTTAGCACTTCAACATAGCTCTTAACAACTTCCAGGATATTCACACAACACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR TCA 90 bp CAATTTATTTCGAAAGTCACTCTGAGAACATTGCACTGTGTTTTGCTGGAACAAGCTTCAGAATCCTGCTaGGGTGAAGGGGAAGCCAGC +
Preference number: 4 (lower is better)
Translates to: QFISKVTLRTLHCVLLEQASESC*GEGEAS
Trigger: GCTGGCTTCCCCTTCACCTCAGCAGGATTCTGAAGC...TTGTTCCAGCAAAACACAGTGCAATGTTCTCAGAGTGACTTTCGAAATAAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR TCA 90 bp AAGTGTAATGATTTTCAAAAACAGCCTTGCTCTTTCTGTTACTCCCTCCTGATCTCCATCGTAAAGCTATaGGCACAGGGCCTGCCCTCA +
Preference number: 4 (lower is better)
Translates to: KCNDFQKQPCSFCYSLLISIVKL*AQGLPS
Trigger: TGAGGGCAGGCCCTGTGCTCATAGCTTTACGATGGA...GATCAGGAGGGAGTAACAGAAAGAGCAAGGCTGTTTTTGAAAATCATTACACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR TCA 90 bp AAGTGTTGTGTGAATATCCTGGAAGTTGTTAAGAGCTATGTTGAAGTGCTAACTTCAGAGCCCCGCGATTaGACTCGAAAGACTCCTCCC +
Preference number: 4 (lower is better)
Translates to: KCCVNILEVVKSYVEVLTSEPRD*TRKTPP
Trigger: GGGAGGAGTCTTTCGAGTTCAATCGCGGGGCTCTGA...AGTTAGCACTTCAACATAGCTCTTAACAACTTCCAGGATATTCACACAACACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475537.2
CDS-3UTR GCA 90 bp TGGGCCCAATTTATTTCGAAAGTCACTCTGAGAACATTGCACTGTGTTTTGCTGATTATCTCTGCGGTTTaGAAAAGCGGAGTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: WAQFISKVTLRTLHCVLLIISAV*KSGVAL
Trigger: CAGGGCCACTCCGCTTTTGCAAACCGCAGAGATAAT...CAGCAAAACACAGTGCAATGTTCTCAGAGTGACTTTCGAAATAAATTGGGCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR GCA 90 bp TCATTTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATGCGTGGCGGAGATCCTaGCGTCCTGTCTCCTTTAGG +
Preference number: 4 (lower is better)
Translates to: SFKCFQCPKNATTKLLSHAWRRS*RPVSFR
Trigger: CCTAAAGGAGACAGGACGGCAGGATCTCCGCCACGC...ATGAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAAATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR GCA 90 bp TTGTCATGTGGACACTGCACCAGGCAGTTCACAGTCTTTATTATGAGGTCACTGTATGAGCACAGGGCCTaGCCTCATTTAATCATCTAC +
Preference number: 4 (lower is better)
Translates to: LSCGHCTRQFTVFIMRSLYEHRA*PHLIIY
Trigger: GTAGATGATTAAATGAGGGCAGGCCCTGTGCTCATA...CAGTGACCTCATAATAAAGACTGTGAACTGCCTGGTGCAGTGTCCACATGACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp GATCATTTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCTTTGCAAAAGCGGAGTaGCCCTGTCAGGCGGGAAGC +
Preference number: 4 (lower is better)
Translates to: DHLNVSSVRKMQQLNCSLFAKAE*PCQAGS
Trigger: GCTTCCCGCCTGACAGGGCCACTCCGCTTTTGCAAA...GAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAAATGATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp AAGTGTTGTGTGAATATCCTGGAAGTTGTTAAGAGCTATGTTGAAGTGCTAACTTTTGCAAAAGCGGAGTaGCCCTGTCAGGCGGGAAGC +
Preference number: 4 (lower is better)
Translates to: KCCVNILEVVKSYVEVLTFAKAE*PCQAGS
Trigger: GCTTCCCGCCTGACAGGGCCACTCCGCTTTTGCAAA...AGTTAGCACTTCAACATAGCTCTTAACAACTTCCAGGATATTCACACAACACTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp TTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATTTGCTTTGCAAAAGCGGAGTaGCCCTGTCAGGCGGGAAGC +
Preference number: 4 (lower is better)
Translates to: LNVSSVRKMQQLNCSLICFAKAE*PCQAGS
Trigger: GCTTCCCGCCTGACAGGGCCACTCCGCTTTTGCAAA...GCAAATGAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp AGGCAGTTCACAGTCTTTATTATGAGGTCACTGGCATCTCTCCATCGTAAAGCTTGGCGATCAAGATATTaGGACCGTTTCGCATGCACT +
Preference number: 4 (lower is better)
Translates to: RQFTVFIMRSLASLHRKAWRSRY*DRFACT
Trigger: AGTGCATGCGAAACGGTCCCAATATCTTGATCGCCA...AGCTTTACGATGGAGAGATGCCAGTGACCTCATAATAAAGACTGTGAACTGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp GGAACGCACAAAGCTAAGAGGTTCTTACGGTCTCAAAAAGCAGTTTTGCCTCTAATTTTAACCACAGCATaGGTGAGAGAGGGTGCTACC +
Preference number: 4 (lower is better)
Translates to: GTHKAKRFLRSQKAVLPLILTTA*VREGAT
Trigger: GGTAGCACCCTCTCTCACCCATGCTGTGGTTAAAAT...TAGAGGCAAAACTGCTTTTTGAGACCGTAAGAACCTCTTAGCTTTGTGCGTTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp TTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATTTGCGGGAATCTGTCCCCATaGGTTTCCTCCAACCCCACC +
Preference number: 4 (lower is better)
Translates to: LNVSSVRKMQQLNCSLICGNLSP*VSSNPT
Trigger: GGTGGGGTTGGAGGAAACCCATGGGGACAGATTCCC...GCAAATGAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp TTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATTTGCAAAGCCGCTACTCCCTaGCTGGCTGAGCTACAGCTC +
Preference number: 4 (lower is better)
Translates to: LNVSSVRKMQQLNCSLICKAATP*LAELQL
Trigger: GAGCTGTAGCTCAGCCAGCCAGGGAGTAGCGGCTTT...GCAAATGAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000475537.2
ENST00000646605.1
CDS-3UTR TCA 90 bp TTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATTTGCAGAGCCTCTCGGATCTaGCAAACCAGATGCAGAGCG +
Preference number: 4 (lower is better)
Translates to: LNVSSVRKMQQLNCSLICRASRI*QTRCRA
Trigger: CGCTCTGCATCTGGTTTGTCAGATCCGAGAGGCTCT...GCAAATGAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377211.8
CDS-3UTR TCA 90 bp GCATACCCATGTTTTGCTATAAACTGTATTCCTTTGGCCATATGTAAGCTATCAGTGTGGAGTTCCCGATaGTCCCCAGCACGAACACAA +
Preference number: 4 (lower is better)
Translates to: AYPCFAINCIPLAICKLSVWSSR*SPARTQ
Trigger: TTGTGTTCGTGCTGGGGATCATCGGGAACTCCACAC...TGATAGCTTACATATGGCCAAAGGAATACAGTTTATAGCAAAACATGGGTATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR TCA 90 bp TTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATTTGCGTGTGGAGTTCCCGATaGTCCCCAGCACGAACACAA +
Preference number: 4 (lower is better)
Translates to: LNVSSVRKMQQLNCSLICVWSSR*SPARTQ
Trigger: TTGTGTTCGTGCTGGGGATCATCGGGAACTCCACAC...GCAAATGAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR TCA 90 bp TGGGCCCAATTTATTTCGAAAGTCACTCTGAGAACATTGCACTGTGTTTTGCTGCAGAGGCTTTCTGTATaGAAGGCACCAGCTTACACA +
Preference number: 4 (lower is better)
Translates to: WAQFISKVTLRTLHCVLLQRLSV*KAPAYT
Trigger: TGTGTAAGCTGGTGCCTTTCATACAGAAAGCCTCTG...CAGCAAAACACAGTGCAATGTTCTCAGAGTGACTTTCGAAATAAATTGGGCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR TCA 90 bp TTGTCATGTGGACACTGCACCAGGCAGTTCACAGTCTTTATTATGAGGTCACTGCGTCTCTGCTTTAGGTaGTCATTTAAAGCAATCTGC +
Preference number: 4 (lower is better)
Translates to: LSCGHCTRQFTVFIMRSLRLCFR*SFKAIC
Trigger: GCAGATTGCTTTAAATGATCACCTAAAGCAGAGACG...CAGTGACCTCATAATAAAGACTGTGAACTGCCTGGTGCAGTGTCCACATGACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR TCA 90 bp TTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATTTGCTCCATCGTAAAGCTATaGGCACAGGGCCTGCCCTCA +
Preference number: 4 (lower is better)
Translates to: LNVSSVRKMQQLNCSLICSIVKL*AQGLPS
Trigger: TGAGGGCAGGCCCTGTGCTCATAGCTTTACGATGGA...GCAAATGAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR GCA 90 bp AAGTGTAATGATTTTCAAAAACAGCCTTGCTCTTTCTGTTACTCCCTCCTGATCATGTCAATGACGATGTaGAGCAGGTCTCCCAGAGCC +
Preference number: 4 (lower is better)
Translates to: KCNDFQKQPCSFCYSLLIMSMTM*SRSPRA
Trigger: GGCTCTGGGAGACCTGCTGCACATCGTCATTGACAT...GATCAGGAGGGAGTAACAGAAAGAGCAAGGCTGTTTTTGAAAATCATTACACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR GCA 90 bp TTGTCATGTGGACACTGCACCAGGCAGTTCACAGTCTTTATTATGAGGTCACTGCAGTCTGTTACATGCTaGTTGTTTGTGACATGTTGG +
Preference number: 4 (lower is better)
Translates to: LSCGHCTRQFTVFIMRSLQSVTC*LFVTCW
Trigger: CCAACATGTCACAAACAAGCAGCATGTAACAGACTG...CAGTGACCTCATAATAAAGACTGTGAACTGCCTGGTGCAGTGTCCACATGACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR GCA 90 bp AAGTGTAATGATTTTCAAAAACAGCCTTGCTCTTTCTGTTACTCCCTCCTGATCAGAGAGGGTGCTACCTaGCCCTTTGTCATGTGGACA +
Preference number: 4 (lower is better)
Translates to: KCNDFQKQPCSFCYSLLIREGAT*PFVMWT
Trigger: TGTCCACATGACAAAGGGGCAGGTAGCACCCTCTCT...GATCAGGAGGGAGTAACAGAAAGAGCAAGGCTGTTTTTGAAAATCATTACACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR GCA 90 bp TTGTCATGTGGACACTGCACCAGGCAGTTCACAGTCTTTATTATGAGGTCACTGCATTGCACTGTGTTTTaGTGGAACAAAATCAGGACC +
Preference number: 4 (lower is better)
Translates to: LSCGHCTRQFTVFIMRSLHCTVF*WNKIRT
Trigger: GGTCCTGATTTTGTTCCAGCAAAACACAGTGCAATG...CAGTGACCTCATAATAAAGACTGTGAACTGCCTGGTGCAGTGTCCACATGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp CAATTTATTTCGAAAGTCACTCTGAGAACATTGCACTGTGTTTTGCTGGAACAATGCAACCTTTCCCCTTaGGCGATGCCTGGACAGCAT +
Preference number: 4 (lower is better)
Translates to: QFISKVTLRTLHCVLLEQCNLSP*AMPGQH
Trigger: ATGCTGTCCAGGCATCGCCCAAGGGGAAAGGTTGCA...TTGTTCCAGCAAAACACAGTGCAATGTTCTCAGAGTGACTTTCGAAATAAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377211.8
CDS-3UTR CCA 90 bp TCATTTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATATGCAGAGCGACGAATaGAGACCACCTTCCCGGGAG +
Preference number: 4 (lower is better)
Translates to: SFKCFQCPKNATTKLLSHMQSDE*RPPSRE
Trigger: CTCCCGGGAAGGTGGTCTCCATTCGTCGCTCTGCAT...ATGAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAAATGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377211.8
CDS-3UTR CCA 90 bp AAGTGTAATGATTTTCAAAAACAGCCTTGCTCTTTCTGTTACTCCCTCCTGATCCTCCCAGAGCCAAGCTaGCGATCAAGATATTGGGAC +
Preference number: 4 (lower is better)
Translates to: KCNDFQKQPCSFCYSLLILPEPS*RSRYWD
Trigger: GTCCCAATATCTTGATCGCCAGCTTGGCTCTGGGAG...GATCAGGAGGGAGTAACAGAAAGAGCAAGGCTGTTTTTGAAAATCATTACACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp AAGTGTAATGATTTTCAAAAACAGCCTTGCTCTTTCTGTTACTCCCTCCTGATCGGCAAAAGACGGTTTTaGCCACTTCCCGTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: KCNDFQKQPCSFCYSLLIGKRRF*PLPVSA
Trigger: AGCAGAGACGGGAAGTGGCCAAAACCGTCTTTTGCC...GATCAGGAGGGAGTAACAGAAAGAGCAAGGCTGTTTTTGAAAATCATTACACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp CTTTCTGGCCACATTGTTGGGTTTTGGTTTACTGTACCATCACATTCAATATTGGGCAAAAGACGGTTTTaGCCACTTCCCGTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: LSGHIVGFWFTVPSHSILGKRRF*PLPVSA
Trigger: AGCAGAGACGGGAAGTGGCCAAAACCGTCTTTTGCC...CAATATTGAATGTGATGGTACAGTAAACCAAAACCCAACAATGTGGCCAGAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp GCATACCCATGTTTTGCTATAAACTGTATTCCTTTGGCCATATGTAAGCTATCAGGGCAAATGCCTACCTaGGAGTGCTCTCAGGATCCA +
Preference number: 4 (lower is better)
Translates to: AYPCFAINCIPLAICKLSGQMPT*ECSQDP
Trigger: TGGATCCTGAGAGCACTCCCAGGTAGGCATTTGCCC...TGATAGCTTACATATGGCCAAAGGAATACAGTTTATAGCAAAACATGGGTATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646948.1
CDS-3UTR TCA 90 bp AGGCAGTTCACAGTCTTTATTATGAGGTCACTGGCATCTCTCCATCGTAAAGCTTCTTGTAAAACTGCATaGAAGCTGTCTTCTGAACGG +
Preference number: 4 (lower is better)
Translates to: RQFTVFIMRSLASLHRKASCKTA*KLSSER
Trigger: CCGTTCAGAAGACAGCTTTCATGCAGTTTTACAAGA...AGCTTTACGATGGAGAGATGCCAGTGACCTCATAATAAAGACTGTGAACTGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR TCA 90 bp AGGCAGTTCACAGTCTTTATTATGAGGTCACTGGCATCTCTCCATCGTAAAGCTCGTCTCTGCTTTAGGTaGTCATTTAAAGCAATCTGC +
Preference number: 4 (lower is better)
Translates to: RQFTVFIMRSLASLHRKARLCFR*SFKAIC
Trigger: GCAGATTGCTTTAAATGATCACCTAAAGCAGAGACG...AGCTTTACGATGGAGAGATGCCAGTGACCTCATAATAAAGACTGTGAACTGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR TCA 90 bp TTGTCATGTGGACACTGCACCAGGCAGTTCACAGTCTTTATTATGAGGTCACTGAATGCAGGAATTCAGTaGAGCCATGTTGATACCAAT +
Preference number: 4 (lower is better)
Translates to: LSCGHCTRQFTVFIMRSLNAGIQ*SHVDTN
Trigger: ATTGGTATCAACATGGCTTCACTGAATTCCTGCATT...CAGTGACCTCATAATAAAGACTGTGAACTGCCTGGTGCAGTGTCCACATGACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR TCA 90 bp TTGTCATGTGGACACTGCACCAGGCAGTTCACAGTCTTTATTATGAGGTCACTGATGATAACAGGCCTCTaGAAAAGTGATTGGGATGAA +
Preference number: 4 (lower is better)
Translates to: LSCGHCTRQFTVFIMRSLMITGL*KSDWDE
Trigger: TTCATCCCAATCACTTTTTCAGAGGCCTGTTATCAT...CAGTGACCTCATAATAAAGACTGTGAACTGCCTGGTGCAGTGTCCACATGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR TCA 90 bp AAGTGTAATGATTTTCAAAAACAGCCTTGCTCTTTCTGTTACTCCCTCCTGATCGTCGAAACTCCTTCCTaGTGCCCTCTCAGCTGTTTT +
Preference number: 4 (lower is better)
Translates to: KCNDFQKQPCSFCYSLLIVETPS*CPLSCF
Trigger: AAAACAGCTGAGAGGGCATCAGGAAGGAGTTTCGAC...GATCAGGAGGGAGTAACAGAAAGAGCAAGGCTGTTTTTGAAAATCATTACACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646607.2
CDS-3UTR GCA 90 bp GATCATTTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCTTTCCCCTTGGGCGATaGCTGGACAGCATCAGTAGT +
Preference number: 4 (lower is better)
Translates to: DHLNVSSVRKMQQLNCSLFPLGR*LDSISS
Trigger: ACTACTGATGCTGTCCAGGCATCGCCCAAGGGGAAA...GAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAAATGATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377211.8
CDS-3UTR GCA 90 bp CTTTCTGGCCACATTGTTGGGTTTTGGTTTACTGTACCATCACATTCAATATTGTTTGCTCGGGGTCTCTaGTGCCATCAGACAAGTACT +
Preference number: 4 (lower is better)
Translates to: LSGHIVGFWFTVPSHSILFARGL*CHQTST
Trigger: AGTACTTGTCTGATGGCAGCAGAGACCCCGAGCAAA...CAATATTGAATGTGATGGTACAGTAAACCAAAACCCAACAATGTGGCCAGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377211.8
CDS-3UTR GCA 90 bp TCCTCCAAGGACTGTTTTTCTTCAAATGACTGGCACCAGCAGCATAAGCATGACCAAAACAATTTCTACTaGTGTCCATTTTGGAACCCC +
Preference number: 4 (lower is better)
Translates to: SSKDCFSSNDWHQQHKHDQNNFY*CPFWNP
Trigger: GGGGTTCCAAAATGGACAGCAGTAGAAATTGTTTTG...GTCATGCTTATGCTGCTGGTGCCAGTCATTTGAAGAAAAACAGTCCTTGGAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000645696.1
CDS-3UTR GCA 90 bp TTGTCATGTGGACACTGCACCAGGCAGTTCACAGTCTTTATTATGAGGTCACTGCAAAACAATTTCTACTaGTGTCCATTTTGGAACCCC +
Preference number: 4 (lower is better)
Translates to: LSCGHCTRQFTVFIMRSLQNNFY*CPFWNP
Trigger: GGGGTTCCAAAATGGACAGCAGTAGAAATTGTTTTG...CAGTGACCTCATAATAAAGACTGTGAACTGCCTGGTGCAGTGTCCACATGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR GCA 90 bp CTTTCTGGCCACATTGTTGGGTTTTGGTTTACTGTACCATCACATTCAATATTGTTGTCATGTGGACACTaGACCAGGCAGTTCACAGTC +
Preference number: 4 (lower is better)
Translates to: LSGHIVGFWFTVPSHSILLSCGH*TRQFTV
Trigger: GACTGTGAACTGCCTGGTGCAGTGTCCACATGACAA...CAATATTGAATGTGATGGTACAGTAAACCAAAACCCAACAATGTGGCCAGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR GCA 90 bp AAGTGTAATGATTTTCAAAAACAGCCTTGCTCTTTCTGTTACTCCCTCCTGATCTTGTCATGTGGACACTaGACCAGGCAGTTCACAGTC +
Preference number: 4 (lower is better)
Translates to: KCNDFQKQPCSFCYSLLILSCGH*TRQFTV
Trigger: GACTGTGAACTGCCTGGTGCAGTGTCCACATGACAA...GATCAGGAGGGAGTAACAGAAAGAGCAAGGCTGTTTTTGAAAATCATTACACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR GCA 90 bp GCATACCCATGTTTTGCTATAAACTGTATTCCTTTGGCCATATGTAAGCTATCAAGAGAGGGTGCTACCTaGCCCTTTGTCATGTGGACA +
Preference number: 4 (lower is better)
Translates to: AYPCFAINCIPLAICKLSREGAT*PFVMWT
Trigger: TGTCCACATGACAAAGGGGCAGGTAGCACCCTCTCT...TGATAGCTTACATATGGCCAAAGGAATACAGTTTATAGCAAAACATGGGTATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR GCA 90 bp GATCATTTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATGGGTGAGAGAGGGTaGTACCTGCCCCTTTGTCAT +
Preference number: 4 (lower is better)
Translates to: DHLNVSSVRKMQQLNCSLMGERG*YLPLCH
Trigger: ATGACAAAGGGGCAGGTAGCACCCTCTCTCACCCAT...GAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAAATGATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp TTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATTTGCCCCTTGGGCGATGCCTaGACAGCATCAGTAGTAGTT +
Preference number: 4 (lower is better)
Translates to: LNVSSVRKMQQLNCSLICPLGDA*TASVVV
Trigger: AACTACTACTGATGCTGTCCAGGCATCGCCCAAGGG...GCAAATGAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377211.8
CDS-3UTR CCA 90 bp GATCATTTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCCTCCCAGAGCCAAGCTaGCGATCAAGATATTGGGAC +
Preference number: 4 (lower is better)
Translates to: DHLNVSSVRKMQQLNCSLLPEPS*RSRYWD
Trigger: GTCCCAATATCTTGATCGCCAGCTTGGCTCTGGGAG...GAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAAATGATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp AGGCAGTTCACAGTCTTTATTATGAGGTCACTGGCATCTCTCCATCGTAAAGCTTGCAGTGATGGCCAATaGCAAGCAGAAATAGAAACT +
Preference number: 4 (lower is better)
Translates to: RQFTVFIMRSLASLHRKACSDGQ*QAEIET
Trigger: AGTTTCTATTTCTGCTTGCCATTGGCCATCACTGCA...AGCTTTACGATGGAGAGATGCCAGTGACCTCATAATAAAGACTGTGAACTGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp TTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATTTGCGGCAAAAGACGGTTTTaGCCACTTCCCGTCTCTGCT +
Preference number: 4 (lower is better)
Translates to: LNVSSVRKMQQLNCSLICGKRRF*PLPVSA
Trigger: AGCAGAGACGGGAAGTGGCCAAAACCGTCTTTTGCC...GCAAATGAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp GATCATTTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCTGCCCCTTTGTCATGTaGACACTGCACCAGGCAGTT +
Preference number: 4 (lower is better)
Translates to: DHLNVSSVRKMQQLNCSLCPFVM*TLHQAV
Trigger: AACTGCCTGGTGCAGTGTCCACATGACAAAGGGGCA...GAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAAATGATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp CTTTCTGGCCACATTGTTGGGTTTTGGTTTACTGTACCATCACATTCAATATTGAAGTCAGCAGGAACTTaGAAACCGCTGTTCCCTCCA +
Preference number: 4 (lower is better)
Translates to: LSGHIVGFWFTVPSHSILKSAGT*KPLFPP
Trigger: TGGAGGGAACAGCGGTTTCCAAGTTCCTGCTGACTT...CAATATTGAATGTGATGGTACAGTAAACCAAAACCCAACAATGTGGCCAGAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646605.1
CDS-3UTR TCA 90 bp TGGGCCCAATTTATTTCGAAAGTCACTCTGAGAACATTGCACTGTGTTTTGCTGTCTTGTAAAACTGCATaGAAGCTGTCTTCTGAACGG +
Preference number: 4 (lower is better)
Translates to: WAQFISKVTLRTLHCVLLSCKTA*KLSSER
Trigger: CCGTTCAGAAGACAGCTTTCATGCAGTTTTACAAGA...CAGCAAAACACAGTGCAATGTTCTCAGAGTGACTTTCGAAATAAATTGGGCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR TCA 90 bp TTGTCATGTGGACACTGCACCAGGCAGTTCACAGTCTTTATTATGAGGTCACTGAGCAGAAATAGAAACTaGATAGCCACCAATCTTTTG +
Preference number: 4 (lower is better)
Translates to: LSCGHCTRQFTVFIMRSLSRNRN*IATNLL
Trigger: CAAAAGATTGGTGGCTATTCAGTTTCTATTTCTGCT...CAGTGACCTCATAATAAAGACTGTGAACTGCCTGGTGCAGTGTCCACATGACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR TCA 90 bp TTTCCTCCAAGGACTGTTTTTCTTCAAATGACTGGCACCAGCAGCATAAGCATGAATGCAGGAATTCAGTaGAGCCATGTTGATACCAAT +
Preference number: 4 (lower is better)
Translates to: FPPRTVFLQMTGTSSISMNAGIQ*SHVDTN
Trigger: ATTGGTATCAACATGGCTTCACTGAATTCCTGCATT...CATGCTTATGCTGCTGGTGCCAGTCATTTGAAGAAAAACAGTCCTTGGAGGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645696.1
CDS-3UTR TCA 90 bp GGAACGCACAAAGCTAAGAGGTTCTTACGGTCTCAAAAAGCAGTTTTGCCTCTAAGCCTAAGTGTTGTGTaGATATCCTGGAAGTTGTTA +
Preference number: 4 (lower is better)
Translates to: GTHKAKRFLRSQKAVLPLSLSVV*ISWKLL
Trigger: TAACAACTTCCAGGATATTCACACAACACTTAGGCT...TAGAGGCAAAACTGCTTTTTGAGACCGTAAGAACCTCTTAGCTTTGTGCGTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR TCA 90 bp AAGTGTAATGATTTTCAAAAACAGCCTTGCTCTTTCTGTTACTCCCTCCTGATCCCTTTTGCATTGATGTaGCGAGGCAATGACGAACGT +
Preference number: 4 (lower is better)
Translates to: KCNDFQKQPCSFCYSLLIPFALM*RGNDER
Trigger: ACGTTCGTCATTGCCTCGTCACATCAATGCAAAAGG...GATCAGGAGGGAGTAACAGAAAGAGCAAGGCTGTTTTTGAAAATCATTACACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR TCA 90 bp GCATACCCATGTTTTGCTATAAACTGTATTCCTTTGGCCATATGTAAGCTATCACAGGACCTTTTGCATTaGTGTGACGAGGCAATGACG +
Preference number: 4 (lower is better)
Translates to: AYPCFAINCIPLAICKLSQDLLH*CDEAMT
Trigger: CGTCATTGCCTCGTCACATCAATGCAAAAGGTCCTG...TGATAGCTTACATATGGCCAAAGGAATACAGTTTATAGCAAAACATGGGTATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR TCA 90 bp CAATTTATTTCGAAAGTCACTCTGAGAACATTGCACTGTGTTTTGCTGGAACAACAGGACCTTTTGCATTaGTGTGACGAGGCAATGACG +
Preference number: 4 (lower is better)
Translates to: QFISKVTLRTLHCVLLEQQDLLH*CDEAMT
Trigger: CGTCATTGCCTCGTCACATCAATGCAAAAGGTCCTG...TTGTTCCAGCAAAACACAGTGCAATGTTCTCAGAGTGACTTTCGAAATAAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR TCA 90 bp GGAACGCACAAAGCTAAGAGGTTCTTACGGTCTCAAAAAGCAGTTTTGCCTCTATTTCGAAAGTCACTCTaGGAACATTGCACTGTGTTT +
Preference number: 4 (lower is better)
Translates to: GTHKAKRFLRSQKAVLPLFRKSL*EHCTVF
Trigger: AAACACAGTGCAATGTTCTCAGAGTGACTTTCGAAA...TAGAGGCAAAACTGCTTTTTGAGACCGTAAGAACCTCTTAGCTTTGTGCGTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR TCA 90 bp TCATTTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATTCTATACCCCGCGATTaGACTCGAAAGACTCCTCCC +
Preference number: 4 (lower is better)
Translates to: SFKCFQCPKNATTKLLSHSIPRD*TRKTPP
Trigger: GGGAGGAGTCTTTCGAGTTCAATCGCGGGGTATAGA...ATGAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAAATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646605.1
CDS-3UTR GCA 90 bp GATCATTTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCGCTCGGGGTCTCTGCTaGCATCAGACAAGTACTTTT +
Preference number: 4 (lower is better)
Translates to: DHLNVSSVRKMQQLNCSLARGLC*HQTSTF
Trigger: AAAAGTACTTGTCTGATGGCAGCAGAGACCCCGAGC...GAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAAATGATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377211.8
CDS-3UTR GCA 90 bp GATCATTTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATTATCTCTGCGGTTTaGAAAAGCGGAGTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: DHLNVSSVRKMQQLNCSLIISAV*KSGVAL
Trigger: CAGGGCCACTCCGCTTTTGCAAACCGCAGAGATAAT...GAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAAATGATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR GCA 90 bp AAGTGTTGTGTGAATATCCTGGAAGTTGTTAAGAGCTATGTTGAAGTGCTAACTATTATCTCTGCGGTTTaGAAAAGCGGAGTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: KCCVNILEVVKSYVEVLTIISAV*KSGVAL
Trigger: CAGGGCCACTCCGCTTTTGCAAACCGCAGAGATAAT...AGTTAGCACTTCAACATAGCTCTTAACAACTTCCAGGATATTCACACAACACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR GCA 90 bp ATTATTGCTCTTTCTTTCTGGCCACATTGTTGGGTTTTGGTTTACTGTACCATCTGGCGTCATTATCTCTaGGGTTTGCAAAAGCGGAGT +
Preference number: 4 (lower is better)
Translates to: IIALSFWPHCWVLVYCTIWRHYL*GLQKRS
Trigger: ACTCCGCTTTTGCAAACCGCAGAGATAATGACGCCA...GATGGTACAGTAAACCAAAACCCAACAATGTGGCCAGAAAGAAAGAGCAATAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR GCA 90 bp CTTTCTGGCCACATTGTTGGGTTTTGGTTTACTGTACCATCACATTCAATATTGTGGCGTCATTATCTCTaGGGTTTGCAAAAGCGGAGT +
Preference number: 4 (lower is better)
Translates to: LSGHIVGFWFTVPSHSILWRHYL*GLQKRS
Trigger: ACTCCGCTTTTGCAAACCGCAGAGATAATGACGCCA...CAATATTGAATGTGATGGTACAGTAAACCAAAACCCAACAATGTGGCCAGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR GCA 90 bp TGGGCCCAATTTATTTCGAAAGTCACTCTGAGAACATTGCACTGTGTTTTGCTGAACTTTAAGCACGACTaGTTTTCCTCCAAGGACTGT +
Preference number: 4 (lower is better)
Translates to: WAQFISKVTLRTLHCVLLNFKHD*FSSKDC
Trigger: ACAGTCCTTGGAGGAAAAGCAGTCGTGCTTAAAGTT...CAGCAAAACACAGTGCAATGTTCTCAGAGTGACTTTCGAAATAAATTGGGCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR GCA 90 bp GCATACCCATGTTTTGCTATAAACTGTATTCCTTTGGCCATATGTAAGCTATCATTCAGCTGGCACATGTaGCAGTCTGTTACATGCTGC +
Preference number: 4 (lower is better)
Translates to: AYPCFAINCIPLAICKLSFSWHM*QSVTCC
Trigger: GCAGCATGTAACAGACTGGCACATGTGCCAGCTGAA...TGATAGCTTACATATGGCCAAAGGAATACAGTTTATAGCAAAACATGGGTATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR GCA 90 bp AAGTGTTGTGTGAATATCCTGGAAGTTGTTAAGAGCTATGTTGAAGTGCTAACTTTCAGCTGGCACATGTaGCAGTCTGTTACATGCTGC +
Preference number: 4 (lower is better)
Translates to: KCCVNILEVVKSYVEVLTFSWHM*QSVTCC
Trigger: GCAGCATGTAACAGACTGGCACATGTGCCAGCTGAA...AGTTAGCACTTCAACATAGCTCTTAACAACTTCCAGGATATTCACACAACACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR GCA 90 bp TTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATTTGCTTCAGCTGGCACATGTaGCAGTCTGTTACATGCTGC +
Preference number: 4 (lower is better)
Translates to: LNVSSVRKMQQLNCSLICFSWHM*QSVTCC
Trigger: GCAGCATGTAACAGACTGGCACATGTGCCAGCTGAA...GCAAATGAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR GCA 90 bp CAATTTATTTCGAAAGTCACTCTGAGAACATTGCACTGTGTTTTGCTGGAACAATTGTCATGTGGACACTaGACCAGGCAGTTCACAGTC +
Preference number: 4 (lower is better)
Translates to: QFISKVTLRTLHCVLLEQLSCGH*TRQFTV
Trigger: GACTGTGAACTGCCTGGTGCAGTGTCCACATGACAA...TTGTTCCAGCAAAACACAGTGCAATGTTCTCAGAGTGACTTTCGAAATAAATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR GCA 90 bp TCATTTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATAGAGAGGGTGCTACCTaGCCCTTTGTCATGTGGACA +
Preference number: 4 (lower is better)
Translates to: SFKCFQCPKNATTKLLSHREGAT*PFVMWT
Trigger: TGTCCACATGACAAAGGGGCAGGTAGCACCCTCTCT...ATGAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAAATGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp AGGCAGTTCACAGTCTTTATTATGAGGTCACTGGCATCTCTCCATCGTAAAGCTTTTTCTTCAAATGACTaGCACCAGCAGCATAAGCAT +
Preference number: 4 (lower is better)
Translates to: RQFTVFIMRSLASLHRKAFSSND*HQQHKH
Trigger: ATGCTTATGCTGCTGGTGCCAGTCATTTGAAGAAAA...AGCTTTACGATGGAGAGATGCCAGTGACCTCATAATAAAGACTGTGAACTGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp ATTATTGCTCTTTCTTTCTGGCCACATTGTTGGGTTTTGGTTTACTGTACCATCATTTTAACCACAGCATaGGTGAGAGAGGGTGCTACC +
Preference number: 4 (lower is better)
Translates to: IIALSFWPHCWVLVYCTIILTTA*VREGAT
Trigger: GGTAGCACCCTCTCTCACCCATGCTGTGGTTAAAAT...GATGGTACAGTAAACCAAAACCCAACAATGTGGCCAGAAAGAAAGAGCAATAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp AAGTGTAATGATTTTCAAAAACAGCCTTGCTCTTTCTGTTACTCCCTCCTGATCATTTTAACCACAGCATaGGTGAGAGAGGGTGCTACC +
Preference number: 4 (lower is better)
Translates to: KCNDFQKQPCSFCYSLLIILTTA*VREGAT
Trigger: GGTAGCACCCTCTCTCACCCATGCTGTGGTTAAAAT...GATCAGGAGGGAGTAACAGAAAGAGCAAGGCTGTTTTTGAAAATCATTACACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp CTTTCTGGCCACATTGTTGGGTTTTGGTTTACTGTACCATCACATTCAATATTGATTTTAACCACAGCATaGGTGAGAGAGGGTGCTACC +
Preference number: 4 (lower is better)
Translates to: LSGHIVGFWFTVPSHSILILTTA*VREGAT
Trigger: GGTAGCACCCTCTCTCACCCATGCTGTGGTTAAAAT...CAATATTGAATGTGATGGTACAGTAAACCAAAACCCAACAATGTGGCCAGAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp AGGCAGTTCACAGTCTTTATTATGAGGTCACTGGCATCTCTCCATCGTAAAGCTTGCACTGTGTTTTGCTaGAACAAAATCAGGACCTTT +
Preference number: 4 (lower is better)
Translates to: RQFTVFIMRSLASLHRKACTVFC*NKIRTF
Trigger: AAAGGTCCTGATTTTGTTCCAGCAAAACACAGTGCA...AGCTTTACGATGGAGAGATGCCAGTGACCTCATAATAAAGACTGTGAACTGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp TTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATTTGCAAGTCAGCAGGAACTTaGAAACCGCTGTTCCCTCCA +
Preference number: 4 (lower is better)
Translates to: LNVSSVRKMQQLNCSLICKSAGT*KPLFPP
Trigger: TGGAGGGAACAGCGGTTTCCAAGTTCCTGCTGACTT...GCAAATGAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000475537.2
ENST00000646605.1
3UTR CAA 72 bp TGGGCCCAATTTATTTCGAAAGTCACTCTGAGAACATaGCACTGTGTTTTGCTGGAACAAAATCAGGACCTT +
Preference number: 4 (lower is better)
Translates to: WAQFISKVTLRT*HCVLLEQNQDL
Trigger: AAGGTCCTGATTTTGTTCCAGCAAAACACAGTGCAATGTTCTCAGAGTGACTTTCGAAATAAATTGGGCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR TCA 90 bp GCATACCCATGTTTTGCTATAAACTGTATTCCTTTGGCCATATGTAAGCTATCACAGAGGCTTTCTGTATaGAAGGCACCAGCTTACACA +
Preference number: 4 (lower is better)
Translates to: AYPCFAINCIPLAICKLSQRLSV*KAPAYT
Trigger: TGTGTAAGCTGGTGCCTTTCATACAGAAAGCCTCTG...TGATAGCTTACATATGGCCAAAGGAATACAGTTTATAGCAAAACATGGGTATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR TCA 90 bp AAGTGTTGTGTGAATATCCTGGAAGTTGTTAAGAGCTATGTTGAAGTGCTAACTCAGAGGCTTTCTGTATaGAAGGCACCAGCTTACACA +
Preference number: 4 (lower is better)
Translates to: KCCVNILEVVKSYVEVLTQRLSV*KAPAYT
Trigger: TGTGTAAGCTGGTGCCTTTCATACAGAAAGCCTCTG...AGTTAGCACTTCAACATAGCTCTTAACAACTTCCAGGATATTCACACAACACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR TCA 90 bp CAATTTATTTCGAAAGTCACTCTGAGAACATTGCACTGTGTTTTGCTGGAACAACAGAGGCTTTCTGTATaGAAGGCACCAGCTTACACA +
Preference number: 4 (lower is better)
Translates to: QFISKVTLRTLHCVLLEQQRLSV*KAPAYT
Trigger: TGTGTAAGCTGGTGCCTTTCATACAGAAAGCCTCTG...TTGTTCCAGCAAAACACAGTGCAATGTTCTCAGAGTGACTTTCGAAATAAATTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR TCA 90 bp GGAACGCACAAAGCTAAGAGGTTCTTACGGTCTCAAAAAGCAGTTTTGCCTCTAAGCAGAAATAGAAACTaGATAGCCACCAATCTTTTG +
Preference number: 4 (lower is better)
Translates to: GTHKAKRFLRSQKAVLPLSRNRN*IATNLL
Trigger: CAAAAGATTGGTGGCTATTCAGTTTCTATTTCTGCT...TAGAGGCAAAACTGCTTTTTGAGACCGTAAGAACCTCTTAGCTTTGTGCGTTCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR TCA 90 bp TGGGCCCAATTTATTTCGAAAGTCACTCTGAGAACATTGCACTGTGTTTTGCTGAGCCTAAGTGTTGTGTaGATATCCTGGAAGTTGTTA +
Preference number: 4 (lower is better)
Translates to: WAQFISKVTLRTLHCVLLSLSVV*ISWKLL
Trigger: TAACAACTTCCAGGATATTCACACAACACTTAGGCT...CAGCAAAACACAGTGCAATGTTCTCAGAGTGACTTTCGAAATAAATTGGGCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR TCA 90 bp TGGGCCCAATTTATTTCGAAAGTCACTCTGAGAACATTGCACTGTGTTTTGCTGTCTGTTACTCCCTCCTaGTCATTTAAATGTTTCCAG +
Preference number: 4 (lower is better)
Translates to: WAQFISKVTLRTLHCVLLSVTPS*SFKCFQ
Trigger: CTGGAAACATTTAAATGATCAGGAGGGAGTAACAGA...CAGCAAAACACAGTGCAATGTTCTCAGAGTGACTTTCGAAATAAATTGGGCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR TCA 90 bp TTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATTTGCCCTTTTGCATTGATGTaGCGAGGCAATGACGAACGT +
Preference number: 4 (lower is better)
Translates to: LNVSSVRKMQQLNCSLICPFALM*RGNDER
Trigger: ACGTTCGTCATTGCCTCGTCACATCAATGCAAAAGG...GCAAATGAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR TCA 90 bp TGGGCCCAATTTATTTCGAAAGTCACTCTGAGAACATTGCACTGTGTTTTGCTGTTTCGAAAGTCACTCTaGGAACATTGCACTGTGTTT +
Preference number: 4 (lower is better)
Translates to: WAQFISKVTLRTLHCVLLFRKSL*EHCTVF
Trigger: AAACACAGTGCAATGTTCTCAGAGTGACTTTCGAAA...CAGCAAAACACAGTGCAATGTTCTCAGAGTGACTTTCGAAATAAATTGGGCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR GCA 90 bp TCATTTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATATTATCTCTGCGGTTTaGAAAAGCGGAGTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: SFKCFQCPKNATTKLLSHIISAV*KSGVAL
Trigger: CAGGGCCACTCCGCTTTTGCAAACCGCAGAGATAAT...ATGAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAAATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR GCA 90 bp TTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATTTGCTGGCGTCATTATCTCTaGGGTTTGCAAAAGCGGAGT +
Preference number: 4 (lower is better)
Translates to: LNVSSVRKMQQLNCSLICWRHYL*GLQKRS
Trigger: ACTCCGCTTTTGCAAACCGCAGAGATAATGACGCCA...GCAAATGAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR GCA 90 bp GATCATTTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCAAATGGCCAGTCCTCTaGCAGCAGCTTGTAGACATT +
Preference number: 4 (lower is better)
Translates to: DHLNVSSVRKMQQLNCSLKWPVL*QQLVDI
Trigger: AATGTCTACAAGCTGCTGGCAGAGGACTGGCCATTT...GAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAAATGATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR GCA 90 bp CAATTTATTTCGAAAGTCACTCTGAGAACATTGCACTGTGTTTTGCTGGAACAAAAATGGCCAGTCCTCTaGCAGCAGCTTGTAGACATT +
Preference number: 4 (lower is better)
Translates to: QFISKVTLRTLHCVLLEQKWPVL*QQLVDI
Trigger: AATGTCTACAAGCTGCTGGCAGAGGACTGGCCATTT...TTGTTCCAGCAAAACACAGTGCAATGTTCTCAGAGTGACTTTCGAAATAAATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR GCA 90 bp TCATTTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATTTCAGCTGGCACATGTaGCAGTCTGTTACATGCTGC +
Preference number: 4 (lower is better)
Translates to: SFKCFQCPKNATTKLLSHFSWHM*QSVTCC
Trigger: GCAGCATGTAACAGACTGGCACATGTGCCAGCTGAA...ATGAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAAATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR GCA 90 bp AAGTGTAATGATTTTCAAAAACAGCCTTGCTCTTTCTGTTACTCCCTCCTGATCAAAGTAACTCAAGTTTaGGCGCCAGTGGGAAACTTG +
Preference number: 4 (lower is better)
Translates to: KCNDFQKQPCSFCYSLLIKVTQV*APVGNL
Trigger: CAAGTTTCCCACTGGCGCGCAAACTTGAGTTACTTT...GATCAGGAGGGAGTAACAGAAAGAGCAAGGCTGTTTTTGAAAATCATTACACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646607.2
CDS-3UTR CCA 90 bp GATCATTTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCTGGCGATCAAGATATTaGGACCGTTTCGCATGCACT +
Preference number: 4 (lower is better)
Translates to: DHLNVSSVRKMQQLNCSLWRSRY*DRFACT
Trigger: AGTGCATGCGAAACGGTCCCAATATCTTGATCGCCA...GAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAAATGATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp GCATACCCATGTTTTGCTATAAACTGTATTCCTTTGGCCATATGTAAGCTATCATGGCGATCAAGATATTaGGACCGTTTCGCATGCACT +
Preference number: 4 (lower is better)
Translates to: AYPCFAINCIPLAICKLSWRSRY*DRFACT
Trigger: AGTGCATGCGAAACGGTCCCAATATCTTGATCGCCA...TGATAGCTTACATATGGCCAAAGGAATACAGTTTATAGCAAAACATGGGTATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp AGGCAGTTCACAGTCTTTATTATGAGGTCACTGGCATCTCTCCATCGTAAAGCTTACTGCTGTCCATTTTaGAACCCCAATTCCTTTAAT +
Preference number: 4 (lower is better)
Translates to: RQFTVFIMRSLASLHRKAYCCPF*NPNSFN
Trigger: ATTAAAGGAATTGGGGTTCCAAAATGGACAGCAGTA...AGCTTTACGATGGAGAGATGCCAGTGACCTCATAATAAAGACTGTGAACTGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp TGGGCCCAATTTATTTCGAAAGTCACTCTGAGAACATTGCACTGTGTTTTGCTGTTATATCAAAACCTATaGCTTCAGGGACAGCCAGAA +
Preference number: 4 (lower is better)
Translates to: WAQFISKVTLRTLHCVLLLYQNL*LQGQPE
Trigger: TTCTGGCTGTCCCTGAAGCCATAGGTTTTGATATAA...CAGCAAAACACAGTGCAATGTTCTCAGAGTGACTTTCGAAATAAATTGGGCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp GACTGTTTTTCTTCAAATGACTGGCACCAGCAGCATAAGCATGACTTAAAGCAGTTTTCTTCAAATGACTaGCACCAGCAGCATAAGCAT +
Preference number: 4 (lower is better)
Translates to: DCFSSNDWHQQHKHDLKQFSSND*HQQHKH
Trigger: ATGCTTATGCTGCTGGTGCCAGTCATTTGAAGAAAA...CTGCTTTAAGTCATGCTTATGCTGCTGGTGCCAGTCATTTGAAGAAAAACAGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645696.1
CDS-3UTR TCA 90 bp CTTTCTGGCCACATTGTTGGGTTTTGGTTTACTGTACCATCACATTCAATATTGTCTTGTAAAACTGCATaGAAGCTGTCTTCTGAACGG +
Preference number: 4 (lower is better)
Translates to: LSGHIVGFWFTVPSHSILSCKTA*KLSSER
Trigger: CCGTTCAGAAGACAGCTTTCATGCAGTTTTACAAGA...CAATATTGAATGTGATGGTACAGTAAACCAAAACCCAACAATGTGGCCAGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR TCA 90 bp TGGGCCCAATTTATTTCGAAAGTCACTCTGAGAACATTGCACTGTGTTTTGCTGTCAGTGAAGCCATGTTaGTACCAATATAGTCCAATA +
Preference number: 4 (lower is better)
Translates to: WAQFISKVTLRTLHCVLLSVKPC*YQYSPI
Trigger: TATTGGACTATATTGGTATCAACATGGCTTCACTGA...CAGCAAAACACAGTGCAATGTTCTCAGAGTGACTTTCGAAATAAATTGGGCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR GCA 90 bp TCATTTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATTGGCGTCATTATCTCTaGGGTTTGCAAAAGCGGAGT +
Preference number: 4 (lower is better)
Translates to: SFKCFQCPKNATTKLLSHWRHYL*GLQKRS
Trigger: ACTCCGCTTTTGCAAACCGCAGAGATAATGACGCCA...ATGAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAAATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR GCA 90 bp TCATTTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATAAATGGCCAGTCCTCTaGCAGCAGCTTGTAGACATT +
Preference number: 4 (lower is better)
Translates to: SFKCFQCPKNATTKLLSHKWPVL*QQLVDI
Trigger: AATGTCTACAAGCTGCTGGCAGAGGACTGGCCATTT...ATGAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAAATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR GCA 90 bp TTTCCTCCAAGGACTGTTTTTCTTCAAATGACTGGCACCAGCAGCATAAGCATGTCATTTAAAGCAATCTaGATGCCACTTTTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: FPPRTVFLQMTGTSSISMSFKAI*MPLFFL
Trigger: GAGAAAGAAAAGTGGCATGCAGATTGCTTTAAATGA...CATGCTTATGCTGCTGGTGCCAGTCATTTGAAGAAAAACAGTCCTTGGAGGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645696.1
CDS-3UTR GCA 90 bp TCATTAGCTTTGAACTTTAAGCACGACTGCTTTTCCTCCAAGGACTGTTTTTCTAACTTTAAGCACGACTaGTTTTCCTCCAAGGACTGT +
Preference number: 4 (lower is better)
Translates to: SLALNFKHDCFSSKDCFSNFKHD*FSSKDC
Trigger: ACAGTCCTTGGAGGAAAAGCAGTCGTGCTTAAAGTT...AGAAAAACAGTCCTTGGAGGAAAAGCAGTCGTGCTTAAAGTTCAAAGCTAATGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000645696.1
CDS-3UTR GCA 90 bp AAGTGTAATGATTTTCAAAAACAGCCTTGCTCTTTCTGTTACTCCCTCCTGATCCAGTCTGTTACATGCTaGTTGTTTGTGACATGTTGG +
Preference number: 4 (lower is better)
Translates to: KCNDFQKQPCSFCYSLLIQSVTC*LFVTCW
Trigger: CCAACATGTCACAAACAAGCAGCATGTAACAGACTG...GATCAGGAGGGAGTAACAGAAAGAGCAAGGCTGTTTTTGAAAATCATTACACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR GCA 90 bp AAGTGTAATGATTTTCAAAAACAGCCTTGCTCTTTCTGTTACTCCCTCCTGATCTGCCAGTCTGTTACATaGTGCTTGTTTGTGACATGT +
Preference number: 4 (lower is better)
Translates to: KCNDFQKQPCSFCYSLLICQSVT*CLFVTC
Trigger: ACATGTCACAAACAAGCAGCATGTAACAGACTGGCA...GATCAGGAGGGAGTAACAGAAAGAGCAAGGCTGTTTTTGAAAATCATTACACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR GCA 90 bp GATCATTTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCTATGAGCACAGGGCCTaGCCTCATTTAATCATCTAC +
Preference number: 4 (lower is better)
Translates to: DHLNVSSVRKMQQLNCSLYEHRA*PHLIIY
Trigger: GTAGATGATTAAATGAGGGCAGGCCCTGTGCTCATA...GAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAAATGATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR GCA 90 bp CAATTTATTTCGAAAGTCACTCTGAGAACATTGCACTGTGTTTTGCTGGAACAATATGAGCACAGGGCCTaGCCTCATTTAATCATCTAC +
Preference number: 4 (lower is better)
Translates to: QFISKVTLRTLHCVLLEQYEHRA*PHLIIY
Trigger: GTAGATGATTAAATGAGGGCAGGCCCTGTGCTCATA...TTGTTCCAGCAAAACACAGTGCAATGTTCTCAGAGTGACTTTCGAAATAAATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR GCA 90 bp TTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATTTGCTATGAGCACAGGGCCTaGCCTCATTTAATCATCTAC +
Preference number: 4 (lower is better)
Translates to: LNVSSVRKMQQLNCSLICYEHRA*PHLIIY
Trigger: GTAGATGATTAAATGAGGGCAGGCCCTGTGCTCATA...GCAAATGAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR GCA 90 bp CTTTCTGGCCACATTGTTGGGTTTTGGTTTACTGTACCATCACATTCAATATTGCATTGCACTGTGTTTTaGTGGAACAAAATCAGGACC +
Preference number: 4 (lower is better)
Translates to: LSGHIVGFWFTVPSHSILHCTVF*WNKIRT
Trigger: GGTCCTGATTTTGTTCCAGCAAAACACAGTGCAATG...CAATATTGAATGTGATGGTACAGTAAACCAAAACCCAACAATGTGGCCAGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR GCA 90 bp AAGTGTAATGATTTTCAAAAACAGCCTTGCTCTTTCTGTTACTCCCTCCTGATCCATTGCACTGTGTTTTaGTGGAACAAAATCAGGACC +
Preference number: 4 (lower is better)
Translates to: KCNDFQKQPCSFCYSLLIHCTVF*WNKIRT
Trigger: GGTCCTGATTTTGTTCCAGCAAAACACAGTGCAATG...GATCAGGAGGGAGTAACAGAAAGAGCAAGGCTGTTTTTGAAAATCATTACACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp GGAACGCACAAAGCTAAGAGGTTCTTACGGTCTCAAAAAGCAGTTTTGCCTCTAAGCTGTATTTATTACTaGAACGGAAGTTGTCATATC +
Preference number: 4 (lower is better)
Translates to: GTHKAKRFLRSQKAVLPLSCIYY*NGSCHI
Trigger: GATATGACAACTTCCGTTCCAGTAATAAATACAGCT...TAGAGGCAAAACTGCTTTTTGAGACCGTAAGAACCTCTTAGCTTTGTGCGTTCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp AGGCAGTTCACAGTCTTTATTATGAGGTCACTGGCATCTCTCCATCGTAAAGCTTTGTTTGTGACATGTTaGTTACATATTGCAGAATGC +
Preference number: 4 (lower is better)
Translates to: RQFTVFIMRSLASLHRKALFVTC*LHIAEC
Trigger: GCATTCTGCAATATGTAACCAACATGTCACAAACAA...AGCTTTACGATGGAGAGATGCCAGTGACCTCATAATAAAGACTGTGAACTGCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp TGGGCCCAATTTATTTCGAAAGTCACTCTGAGAACATTGCACTGTGTTTTGCTGTATTTTAAATTCAGCTaGCACATGTGCCAGTCTGTT +
Preference number: 4 (lower is better)
Translates to: WAQFISKVTLRTLHCVLLYFKFS*HMCQSV
Trigger: AACAGACTGGCACATGTGCCAGCTGAATTTAAAATA...CAGCAAAACACAGTGCAATGTTCTCAGAGTGACTTTCGAAATAAATTGGGCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR TCA 90 bp GATCATTTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCTCTTGTAAAACTGCATaGAAGCTGTCTTCTGAACGG +
Preference number: 4 (lower is better)
Translates to: DHLNVSSVRKMQQLNCSLSCKTA*KLSSER
Trigger: CCGTTCAGAAGACAGCTTTCATGCAGTTTTACAAGA...GAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAAATGATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR TCA 90 bp TTCAAGATGAGCTGTATTTATTACTGGAACGGAAGTTGTCATATCCGTGATCATTCTTGTAAAACTGCATaGAAGCTGTCTTCTGAACGG +
Preference number: 4 (lower is better)
Translates to: FKMSCIYYWNGSCHIRDHSCKTA*KLSSER
Trigger: CCGTTCAGAAGACAGCTTTCATGCAGTTTTACAAGA...ATGATCACGGATATGACAACTTCCGTTCCAGTAATAAATACAGCTCATCTTGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645696.1
CDS-3UTR TCA 90 bp GCATACCCATGTTTTGCTATAAACTGTATTCCTTTGGCCATATGTAAGCTATCATCTTGTAAAACTGCATaGAAGCTGTCTTCTGAACGG +
Preference number: 4 (lower is better)
Translates to: AYPCFAINCIPLAICKLSSCKTA*KLSSER
Trigger: CCGTTCAGAAGACAGCTTTCATGCAGTTTTACAAGA...TGATAGCTTACATATGGCCAAAGGAATACAGTTTATAGCAAAACATGGGTATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR TCA 90 bp GATCATTTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCCGTCTCTGCTTTAGGTaGTCATTTAAAGCAATCTGC +
Preference number: 4 (lower is better)
Translates to: DHLNVSSVRKMQQLNCSLRLCFR*SFKAIC
Trigger: GCAGATTGCTTTAAATGATCACCTAAAGCAGAGACG...GAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAAATGATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR TCA 90 bp ATTATTGCTCTTTCTTTCTGGCCACATTGTTGGGTTTTGGTTTACTGTACCATCATGATAACAGGCCTCTaGAAAAGTGATTGGGATGAA +
Preference number: 4 (lower is better)
Translates to: IIALSFWPHCWVLVYCTIMITGL*KSDWDE
Trigger: TTCATCCCAATCACTTTTTCAGAGGCCTGTTATCAT...GATGGTACAGTAAACCAAAACCCAACAATGTGGCCAGAAAGAAAGAGCAATAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR GCA 90 bp TGGGCCCAATTTATTTCGAAAGTCACTCTGAGAACATTGCACTGTGTTTTGCTGTCATTTAAAGCAATCTaGATGCCACTTTTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: WAQFISKVTLRTLHCVLLSFKAI*MPLFFL
Trigger: GAGAAAGAAAAGTGGCATGCAGATTGCTTTAAATGA...CAGCAAAACACAGTGCAATGTTCTCAGAGTGACTTTCGAAATAAATTGGGCCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR GCA 90 bp CAATTTATTTCGAAAGTCACTCTGAGAACATTGCACTGTGTTTTGCTGGAACAAAACTTTAAGCACGACTaGTTTTCCTCCAAGGACTGT +
Preference number: 4 (lower is better)
Translates to: QFISKVTLRTLHCVLLEQNFKHD*FSSKDC
Trigger: ACAGTCCTTGGAGGAAAAGCAGTCGTGCTTAAAGTT...TTGTTCCAGCAAAACACAGTGCAATGTTCTCAGAGTGACTTTCGAAATAAATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR GCA 90 bp AAGTGTTGTGTGAATATCCTGGAAGTTGTTAAGAGCTATGTTGAAGTGCTAACTAACTTTAAGCACGACTaGTTTTCCTCCAAGGACTGT +
Preference number: 4 (lower is better)
Translates to: KCCVNILEVVKSYVEVLTNFKHD*FSSKDC
Trigger: ACAGTCCTTGGAGGAAAAGCAGTCGTGCTTAAAGTT...AGTTAGCACTTCAACATAGCTCTTAACAACTTCCAGGATATTCACACAACACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR GCA 90 bp AAGTGTAATGATTTTCAAAAACAGCCTTGCTCTTTCTGTTACTCCCTCCTGATCATGTTGGTTACATATTaGAGAATGCTGAGGTTTGGG +
Preference number: 4 (lower is better)
Translates to: KCNDFQKQPCSFCYSLLIMLVTY*RMLRFG
Trigger: CCCAAACCTCAGCATTCTGCAATATGTAACCAACAT...GATCAGGAGGGAGTAACAGAAAGAGCAAGGCTGTTTTTGAAAATCATTACACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR GCA 90 bp GCATACCCATGTTTTGCTATAAACTGTATTCCTTTGGCCATATGTAAGCTATCACAGTCTGTTACATGCTaGTTGTTTGTGACATGTTGG +
Preference number: 4 (lower is better)
Translates to: AYPCFAINCIPLAICKLSQSVTC*LFVTCW
Trigger: CCAACATGTCACAAACAAGCAGCATGTAACAGACTG...TGATAGCTTACATATGGCCAAAGGAATACAGTTTATAGCAAAACATGGGTATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR GCA 90 bp TTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATTTGCTGCCAGTCTGTTACATaGTGCTTGTTTGTGACATGT +
Preference number: 4 (lower is better)
Translates to: LNVSSVRKMQQLNCSLICCQSVT*CLFVTC
Trigger: ACATGTCACAAACAAGCAGCATGTAACAGACTGGCA...GCAAATGAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR GCA 90 bp CAATTTATTTCGAAAGTCACTCTGAGAACATTGCACTGTGTTTTGCTGGAACAATGCCAGTCTGTTACATaGTGCTTGTTTGTGACATGT +
Preference number: 4 (lower is better)
Translates to: QFISKVTLRTLHCVLLEQCQSVT*CLFVTC
Trigger: ACATGTCACAAACAAGCAGCATGTAACAGACTGGCA...TTGTTCCAGCAAAACACAGTGCAATGTTCTCAGAGTGACTTTCGAAATAAATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR GCA 90 bp GATCATTTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCTGCCAGTCTGTTACATaGTGCTTGTTTGTGACATGT +
Preference number: 4 (lower is better)
Translates to: DHLNVSSVRKMQQLNCSLCQSVT*CLFVTC
Trigger: ACATGTCACAAACAAGCAGCATGTAACAGACTGGCA...GAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAAATGATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR GCA 90 bp CAATTTATTTCGAAAGTCACTCTGAGAACATTGCACTGTGTTTTGCTGGAACAACATTGCACTGTGTTTTaGTGGAACAAAATCAGGACC +
Preference number: 4 (lower is better)
Translates to: QFISKVTLRTLHCVLLEQHCTVF*WNKIRT
Trigger: GGTCCTGATTTTGTTCCAGCAAAACACAGTGCAATG...TTGTTCCAGCAAAACACAGTGCAATGTTCTCAGAGTGACTTTCGAAATAAATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp GCATACCCATGTTTTGCTATAAACTGTATTCCTTTGGCCATATGTAAGCTATCATGCAGTGATGGCCAATaGCAAGCAGAAATAGAAACT +
Preference number: 4 (lower is better)
Translates to: AYPCFAINCIPLAICKLSCSDGQ*QAEIET
Trigger: AGTTTCTATTTCTGCTTGCCATTGGCCATCACTGCA...TGATAGCTTACATATGGCCAAAGGAATACAGTTTATAGCAAAACATGGGTATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp TTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATTTGCTGCAGTGATGGCCAATaGCAAGCAGAAATAGAAACT +
Preference number: 4 (lower is better)
Translates to: LNVSSVRKMQQLNCSLICCSDGQ*QAEIET
Trigger: AGTTTCTATTTCTGCTTGCCATTGGCCATCACTGCA...GCAAATGAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp TTCAAGATGAGCTGTATTTATTACTGGAACGGAAGTTGTCATATCCGTGATCATTGCAGTGATGGCCAATaGCAAGCAGAAATAGAAACT +
Preference number: 4 (lower is better)
Translates to: FKMSCIYYWNGSCHIRDHCSDGQ*QAEIET
Trigger: AGTTTCTATTTCTGCTTGCCATTGGCCATCACTGCA...ATGATCACGGATATGACAACTTCCGTTCCAGTAATAAATACAGCTCATCTTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645696.1
CDS-3UTR CCA 90 bp GATCATTTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCTGCAGTGATGGCCAATaGCAAGCAGAAATAGAAACT +
Preference number: 4 (lower is better)
Translates to: DHLNVSSVRKMQQLNCSLCSDGQ*QAEIET
Trigger: AGTTTCTATTTCTGCTTGCCATTGGCCATCACTGCA...GAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAAATGATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp CTTTCTGGCCACATTGTTGGGTTTTGGTTTACTGTACCATCACATTCAATATTGTTTTCTTCAAATGACTaGCACCAGCAGCATAAGCAT +
Preference number: 4 (lower is better)
Translates to: LSGHIVGFWFTVPSHSILFSSND*HQQHKH
Trigger: ATGCTTATGCTGCTGGTGCCAGTCATTTGAAGAAAA...CAATATTGAATGTGATGGTACAGTAAACCAAAACCCAACAATGTGGCCAGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR TCA 90 bp TCATTTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATCGTCTCTGCTTTAGGTaGTCATTTAAAGCAATCTGC +
Preference number: 4 (lower is better)
Translates to: SFKCFQCPKNATTKLLSHRLCFR*SFKAIC
Trigger: GCAGATTGCTTTAAATGATCACCTAAAGCAGAGACG...ATGAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAAATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR TCA 90 bp GATCATTTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCAATGCAGGAATTCAGTaGAGCCATGTTGATACCAAT +
Preference number: 4 (lower is better)
Translates to: DHLNVSSVRKMQQLNCSLNAGIQ*SHVDTN
Trigger: ATTGGTATCAACATGGCTTCACTGAATTCCTGCATT...GAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAAATGATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR TCA 90 bp TTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATTTGCAATGCAGGAATTCAGTaGAGCCATGTTGATACCAAT +
Preference number: 4 (lower is better)
Translates to: LNVSSVRKMQQLNCSLICNAGIQ*SHVDTN
Trigger: ATTGGTATCAACATGGCTTCACTGAATTCCTGCATT...GCAAATGAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR TCA 90 bp AAGTGTTGTGTGAATATCCTGGAAGTTGTTAAGAGCTATGTTGAAGTGCTAACTAATGCAGGAATTCAGTaGAGCCATGTTGATACCAAT +
Preference number: 4 (lower is better)
Translates to: KCCVNILEVVKSYVEVLTNAGIQ*SHVDTN
Trigger: ATTGGTATCAACATGGCTTCACTGAATTCCTGCATT...AGTTAGCACTTCAACATAGCTCTTAACAACTTCCAGGATATTCACACAACACTT
38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR TCA 90 bp AAGTGTTGTGTGAATATCCTGGAAGTTGTTAAGAGCTATGTTGAAGTGCTAACTAGCCTAAGTGTTGTGTaGATATCCTGGAAGTTGTTA +
Preference number: 4 (lower is better)
Translates to: KCCVNILEVVKSYVEVLTSLSVV*ISWKLL
Trigger: TAACAACTTCCAGGATATTCACACAACACTTAGGCT...AGTTAGCACTTCAACATAGCTCTTAACAACTTCCAGGATATTCACACAACACTT
38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR TCA 90 bp TTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATTTGCTCTGTTACTCCCTCCTaGTCATTTAAATGTTTCCAG +
Preference number: 4 (lower is better)
Translates to: LNVSSVRKMQQLNCSLICSVTPS*SFKCFQ
Trigger: CTGGAAACATTTAAATGATCAGGAGGGAGTAACAGA...GCAAATGAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR TCA 90 bp TTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATTTGCAGTTTTGCCTCTAGATaGAAGAAAAGCACCATGTCA +
Preference number: 4 (lower is better)
Translates to: LNVSSVRKMQQLNCSLICSFASR*KKSTMS
Trigger: TGACATGGTGCTTTTCTTTCATCTAGAGGCAAAACT...GCAAATGAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR TCA 90 bp GATCATTTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCAGTTTTGCCTCTAGATaGAAGAAAAGCACCATGTCA +
Preference number: 4 (lower is better)
Translates to: DHLNVSSVRKMQQLNCSLSFASR*KKSTMS
Trigger: TGACATGGTGCTTTTCTTTCATCTAGAGGCAAAACT...GAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAAATGATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR TCA 90 bp CAATTTATTTCGAAAGTCACTCTGAGAACATTGCACTGTGTTTTGCTGGAACAATTTCGAAAGTCACTCTaGGAACATTGCACTGTGTTT +
Preference number: 4 (lower is better)
Translates to: QFISKVTLRTLHCVLLEQFRKSL*EHCTVF
Trigger: AAACACAGTGCAATGTTCTCAGAGTGACTTTCGAAA...TTGTTCCAGCAAAACACAGTGCAATGTTCTCAGAGTGACTTTCGAAATAAATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR TCA 90 bp AAGTGTTGTGTGAATATCCTGGAAGTTGTTAAGAGCTATGTTGAAGTGCTAACTATGATAACAGGCCTCTaGAAAAGTGATTGGGATGAA +
Preference number: 4 (lower is better)
Translates to: KCCVNILEVVKSYVEVLTMITGL*KSDWDE
Trigger: TTCATCCCAATCACTTTTTCAGAGGCCTGTTATCAT...AGTTAGCACTTCAACATAGCTCTTAACAACTTCCAGGATATTCACACAACACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR TCA 90 bp GATCATTTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATGATAACAGGCCTCTaGAAAAGTGATTGGGATGAA +
Preference number: 4 (lower is better)
Translates to: DHLNVSSVRKMQQLNCSLMITGL*KSDWDE
Trigger: TTCATCCCAATCACTTTTTCAGAGGCCTGTTATCAT...GAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAAATGATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR GCA 90 bp AAGTGTTGTGTGAATATCCTGGAAGTTGTTAAGAGCTATGTTGAAGTGCTAACTCAAAACAATTTCTACTaGTGTCCATTTTGGAACCCC +
Preference number: 4 (lower is better)
Translates to: KCCVNILEVVKSYVEVLTQNNFY*CPFWNP
Trigger: GGGGTTCCAAAATGGACAGCAGTAGAAATTGTTTTG...AGTTAGCACTTCAACATAGCTCTTAACAACTTCCAGGATATTCACACAACACTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR GCA 90 bp GATCATTTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCCAAAACAATTTCTACTaGTGTCCATTTTGGAACCCC +
Preference number: 4 (lower is better)
Translates to: DHLNVSSVRKMQQLNCSLQNNFY*CPFWNP
Trigger: GGGGTTCCAAAATGGACAGCAGTAGAAATTGTTTTG...GAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAAATGATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR GCA 90 bp TTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATTTGCCAAAACAATTTCTACTaGTGTCCATTTTGGAACCCC +
Preference number: 4 (lower is better)
Translates to: LNVSSVRKMQQLNCSLICQNNFY*CPFWNP
Trigger: GGGGTTCCAAAATGGACAGCAGTAGAAATTGTTTTG...GCAAATGAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR GCA 90 bp TCATTTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATAACTTTAAGCACGACTaGTTTTCCTCCAAGGACTGT +
Preference number: 4 (lower is better)
Translates to: SFKCFQCPKNATTKLLSHNFKHD*FSSKDC
Trigger: ACAGTCCTTGGAGGAAAAGCAGTCGTGCTTAAAGTT...ATGAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAAATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR GCA 90 bp GATCATTTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATGTTGGTTACATATTaGAGAATGCTGAGGTTTGGG +
Preference number: 4 (lower is better)
Translates to: DHLNVSSVRKMQQLNCSLMLVTY*RMLRFG
Trigger: CCCAAACCTCAGCATTCTGCAATATGTAACCAACAT...GAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAAATGATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR GCA 90 bp TCATTTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATCAGTCTGTTACATGCTaGTTGTTTGTGACATGTTGG +
Preference number: 4 (lower is better)
Translates to: SFKCFQCPKNATTKLLSHQSVTC*LFVTCW
Trigger: CCAACATGTCACAAACAAGCAGCATGTAACAGACTG...ATGAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAAATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp TCATTAGCTTTGAACTTTAAGCACGACTGCTTTTCCTCCAAGGACTGTTTTTCTTACTGCTGTCCATTTTaGAACCCCAATTCCTTTAAT +
Preference number: 4 (lower is better)
Translates to: SLALNFKHDCFSSKDCFSYCCPF*NPNSFN
Trigger: ATTAAAGGAATTGGGGTTCCAAAATGGACAGCAGTA...AGAAAAACAGTCCTTGGAGGAAAAGCAGTCGTGCTTAAAGTTCAAAGCTAATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000645696.1
CDS-3UTR CCA 90 bp ATTATTGCTCTTTCTTTCTGGCCACATTGTTGGGTTTTGGTTTACTGTACCATCTACTGCTGTCCATTTTaGAACCCCAATTCCTTTAAT +
Preference number: 4 (lower is better)
Translates to: IIALSFWPHCWVLVYCTIYCCPF*NPNSFN
Trigger: ATTAAAGGAATTGGGGTTCCAAAATGGACAGCAGTA...GATGGTACAGTAAACCAAAACCCAACAATGTGGCCAGAAAGAAAGAGCAATAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp GCATACCCATGTTTTGCTATAAACTGTATTCCTTTGGCCATATGTAAGCTATCATTATATCAAAACCTATaGCTTCAGGGACAGCCAGAA +
Preference number: 4 (lower is better)
Translates to: AYPCFAINCIPLAICKLSLYQNL*LQGQPE
Trigger: TTCTGGCTGTCCCTGAAGCCATAGGTTTTGATATAA...TGATAGCTTACATATGGCCAAAGGAATACAGTTTATAGCAAAACATGGGTATGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp TTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATTTGCTTATATCAAAACCTATaGCTTCAGGGACAGCCAGAA +
Preference number: 4 (lower is better)
Translates to: LNVSSVRKMQQLNCSLICLYQNL*LQGQPE
Trigger: TTCTGGCTGTCCCTGAAGCCATAGGTTTTGATATAA...GCAAATGAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp TTCAAGATGAGCTGTATTTATTACTGGAACGGAAGTTGTCATATCCGTGATCATTTATATCAAAACCTATaGCTTCAGGGACAGCCAGAA +
Preference number: 4 (lower is better)
Translates to: FKMSCIYYWNGSCHIRDHLYQNL*LQGQPE
Trigger: TTCTGGCTGTCCCTGAAGCCATAGGTTTTGATATAA...ATGATCACGGATATGACAACTTCCGTTCCAGTAATAAATACAGCTCATCTTGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645696.1
CDS-3UTR CCA 90 bp GATCATTTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCTTTTCTTCAAATGACTaGCACCAGCAGCATAAGCAT +
Preference number: 4 (lower is better)
Translates to: DHLNVSSVRKMQQLNCSLFSSND*HQQHKH
Trigger: ATGCTTATGCTGCTGGTGCCAGTCATTTGAAGAAAA...GAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAAATGATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp ATTATTGCTCTTTCTTTCTGGCCACATTGTTGGGTTTTGGTTTACTGTACCATCCACATTGTTGGGTTTTaGTTTACTGTACCATCACAT +
Preference number: 4 (lower is better)
Translates to: IIALSFWPHCWVLVYCTIHIVGF*FTVPSH
Trigger: ATGTGATGGTACAGTAAACCAAAACCCAACAATGTG...GATGGTACAGTAAACCAAAACCCAACAATGTGGCCAGAAAGAAAGAGCAATAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp AAGTGTAATGATTTTCAAAAACAGCCTTGCTCTTTCTGTTACTCCCTCCTGATCCACATTGTTGGGTTTTaGTTTACTGTACCATCACAT +
Preference number: 4 (lower is better)
Translates to: KCNDFQKQPCSFCYSLLIHIVGF*FTVPSH
Trigger: ATGTGATGGTACAGTAAACCAAAACCCAACAATGTG...GATCAGGAGGGAGTAACAGAAAGAGCAAGGCTGTTTTTGAAAATCATTACACTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp CAATTTATTTCGAAAGTCACTCTGAGAACATTGCACTGTGTTTTGCTGGAACAAATTGCTCTTTCTTTCTaGCCACATTGTTGGGTTTTG +
Preference number: 4 (lower is better)
Translates to: QFISKVTLRTLHCVLLEQIALSF*PHCWVL
Trigger: CAAAACCCAACAATGTGGCCAGAAAGAAAGAGCAAT...TTGTTCCAGCAAAACACAGTGCAATGTTCTCAGAGTGACTTTCGAAATAAATTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp TTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATTTGCATTGCTCTTTCTTTCTaGCCACATTGTTGGGTTTTG +
Preference number: 4 (lower is better)
Translates to: LNVSSVRKMQQLNCSLICIALSF*PHCWVL
Trigger: CAAAACCCAACAATGTGGCCAGAAAGAAAGAGCAAT...GCAAATGAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
3UTR CAA 72 bp AAAATTTGGGCATATTTTAAGACCGAGTTAAAGCTCTaGGGCCCAATTTATTTCGAAAGTCACTCTGAGAAC +
Preference number: 4 (lower is better)
Translates to: KIWAYFKTELKL*GPIYFESHSEN
Trigger: GTTCTCAGAGTGACTTTCGAAATAAATTGGGCCCAAGAGCTTTAACTCGGTCTTAAAATATGCCCAAATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR TCA 90 bp AAGTGTTGTGTGAATATCCTGGAAGTTGTTAAGAGCTATGTTGAAGTGCTAACTAGCAGAAATAGAAACTaGATAGCCACCAATCTTTTG +
Preference number: 4 (lower is better)
Translates to: KCCVNILEVVKSYVEVLTSRNRN*IATNLL
Trigger: CAAAAGATTGGTGGCTATTCAGTTTCTATTTCTGCT...AGTTAGCACTTCAACATAGCTCTTAACAACTTCCAGGATATTCACACAACACTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR TCA 90 bp TTCAAGATGAGCTGTATTTATTACTGGAACGGAAGTTGTCATATCCGTGATCATAGCAGAAATAGAAACTaGATAGCCACCAATCTTTTG +
Preference number: 4 (lower is better)
Translates to: FKMSCIYYWNGSCHIRDHSRNRN*IATNLL
Trigger: CAAAAGATTGGTGGCTATTCAGTTTCTATTTCTGCT...ATGATCACGGATATGACAACTTCCGTTCCAGTAATAAATACAGCTCATCTTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645696.1
CDS-3UTR TCA 90 bp TTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATTTGCAGCAGAAATAGAAACTaGATAGCCACCAATCTTTTG +
Preference number: 4 (lower is better)
Translates to: LNVSSVRKMQQLNCSLICSRNRN*IATNLL
Trigger: CAAAAGATTGGTGGCTATTCAGTTTCTATTTCTGCT...GCAAATGAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR TCA 90 bp CAATTTATTTCGAAAGTCACTCTGAGAACATTGCACTGTGTTTTGCTGGAACAATCAGTGAAGCCATGTTaGTACCAATATAGTCCAATA +
Preference number: 4 (lower is better)
Translates to: QFISKVTLRTLHCVLLEQSVKPC*YQYSPI
Trigger: TATTGGACTATATTGGTATCAACATGGCTTCACTGA...TTGTTCCAGCAAAACACAGTGCAATGTTCTCAGAGTGACTTTCGAAATAAATTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR TCA 90 bp TTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATTTGCTCAGTGAAGCCATGTTaGTACCAATATAGTCCAATA +
Preference number: 4 (lower is better)
Translates to: LNVSSVRKMQQLNCSLICSVKPC*YQYSPI
Trigger: TATTGGACTATATTGGTATCAACATGGCTTCACTGA...GCAAATGAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR TCA 90 bp TCTTTCAAGATGAGCTGTATTTATTACTGGAACGGAAGTTGTCATATCCGTGATTCAGTGAAGCCATGTTaGTACCAATATAGTCCAATA +
Preference number: 4 (lower is better)
Translates to: SFKMSCIYYWNGSCHIRDSVKPC*YQYSPI
Trigger: TATTGGACTATATTGGTATCAACATGGCTTCACTGA...ATCACGGATATGACAACTTCCGTTCCAGTAATAAATACAGCTCATCTTGAAAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645696.1
CDS-3UTR TCA 90 bp AAGTGTTGTGTGAATATCCTGGAAGTTGTTAAGAGCTATGTTGAAGTGCTAACTTCAGTGAAGCCATGTTaGTACCAATATAGTCCAATA +
Preference number: 4 (lower is better)
Translates to: KCCVNILEVVKSYVEVLTSVKPC*YQYSPI
Trigger: TATTGGACTATATTGGTATCAACATGGCTTCACTGA...AGTTAGCACTTCAACATAGCTCTTAACAACTTCCAGGATATTCACACAACACTT
37% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR TCA 90 bp TCATTTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATAATGCAGGAATTCAGTaGAGCCATGTTGATACCAAT +
Preference number: 4 (lower is better)
Translates to: SFKCFQCPKNATTKLLSHNAGIQ*SHVDTN
Trigger: ATTGGTATCAACATGGCTTCACTGAATTCCTGCATT...ATGAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAAATGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR TCA 90 bp TCATTTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATAGCCTAAGTGTTGTGTaGATATCCTGGAAGTTGTTA +
Preference number: 4 (lower is better)
Translates to: SFKCFQCPKNATTKLLSHSLSVV*ISWKLL
Trigger: TAACAACTTCCAGGATATTCACACAACACTTAGGCT...ATGAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAAATGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR TCA 90 bp TCATTTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATTTTCGAAAGTCACTCTaGGAACATTGCACTGTGTTT +
Preference number: 4 (lower is better)
Translates to: SFKCFQCPKNATTKLLSHFRKSL*EHCTVF
Trigger: AAACACAGTGCAATGTTCTCAGAGTGACTTTCGAAA...ATGAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAAATGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR GCA 90 bp AAGTGTAATGATTTTCAAAAACAGCCTTGCTCTTTCTGTTACTCCCTCCTGATCTCATTTAAAGCAATCTaGATGCCACTTTTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: KCNDFQKQPCSFCYSLLISFKAI*MPLFFL
Trigger: GAGAAAGAAAAGTGGCATGCAGATTGCTTTAAATGA...GATCAGGAGGGAGTAACAGAAAGAGCAAGGCTGTTTTTGAAAATCATTACACTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR GCA 90 bp ATTATTGCTCTTTCTTTCTGGCCACATTGTTGGGTTTTGGTTTACTGTACCATCTCATTTAAAGCAATCTaGATGCCACTTTTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: IIALSFWPHCWVLVYCTISFKAI*MPLFFL
Trigger: GAGAAAGAAAAGTGGCATGCAGATTGCTTTAAATGA...GATGGTACAGTAAACCAAAACCCAACAATGTGGCCAGAAAGAAAGAGCAATAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR GCA 90 bp ATTATTGCTCTTTCTTTCTGGCCACATTGTTGGGTTTTGGTTTACTGTACCATCCTGATTTTCTTTCCATaGCGTAAACAGCTCATAAAA +
Preference number: 4 (lower is better)
Translates to: IIALSFWPHCWVLVYCTILIFFP*RKQLIK
Trigger: TTTTATGAGCTGTTTACGGCATGGAAAGAAAATCAG...GATGGTACAGTAAACCAAAACCCAACAATGTGGCCAGAAAGAAAGAGCAATAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp GATCATTTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCTACTGCTGTCCATTTTaGAACCCCAATTCCTTTAAT +
Preference number: 4 (lower is better)
Translates to: DHLNVSSVRKMQQLNCSLYCCPF*NPNSFN
Trigger: ATTAAAGGAATTGGGGTTCCAAAATGGACAGCAGTA...GAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAAATGATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp CTTTCTGGCCACATTGTTGGGTTTTGGTTTACTGTACCATCACATTCAATATTGAGCTGTATTTATTACTaGAACGGAAGTTGTCATATC +
Preference number: 4 (lower is better)
Translates to: LSGHIVGFWFTVPSHSILSCIYY*NGSCHI
Trigger: GATATGACAACTTCCGTTCCAGTAATAAATACAGCT...CAATATTGAATGTGATGGTACAGTAAACCAAAACCCAACAATGTGGCCAGAAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp AAGTGTAATGATTTTCAAAAACAGCCTTGCTCTTTCTGTTACTCCCTCCTGATCAGCTGTATTTATTACTaGAACGGAAGTTGTCATATC +
Preference number: 4 (lower is better)
Translates to: KCNDFQKQPCSFCYSLLISCIYY*NGSCHI
Trigger: GATATGACAACTTCCGTTCCAGTAATAAATACAGCT...GATCAGGAGGGAGTAACAGAAAGAGCAAGGCTGTTTTTGAAAATCATTACACTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp AAGTGTAATGATTTTCAAAAACAGCCTTGCTCTTTCTGTTACTCCCTCCTGATCTTGTTTGTGACATGTTaGTTACATATTGCAGAATGC +
Preference number: 4 (lower is better)
Translates to: KCNDFQKQPCSFCYSLLILFVTC*LHIAEC
Trigger: GCATTCTGCAATATGTAACCAACATGTCACAAACAA...GATCAGGAGGGAGTAACAGAAAGAGCAAGGCTGTTTTTGAAAATCATTACACTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp GATCATTTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCTATTTTAAATTCAGCTaGCACATGTGCCAGTCTGTT +
Preference number: 4 (lower is better)
Translates to: DHLNVSSVRKMQQLNCSLYFKFS*HMCQSV
Trigger: AACAGACTGGCACATGTGCCAGCTGAATTTAAAATA...GAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAAATGATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp GCATACCCATGTTTTGCTATAAACTGTATTCCTTTGGCCATATGTAAGCTATCATATTTTAAATTCAGCTaGCACATGTGCCAGTCTGTT +
Preference number: 4 (lower is better)
Translates to: AYPCFAINCIPLAICKLSYFKFS*HMCQSV
Trigger: AACAGACTGGCACATGTGCCAGCTGAATTTAAAATA...TGATAGCTTACATATGGCCAAAGGAATACAGTTTATAGCAAAACATGGGTATGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp TCATTTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATTGCACTGTGTTTTGCTaGAACAAAATCAGGACCTTT +
Preference number: 4 (lower is better)
Translates to: SFKCFQCPKNATTKLLSHCTVFC*NKIRTF
Trigger: AAAGGTCCTGATTTTGTTCCAGCAAAACACAGTGCA...ATGAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAAATGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp CAATTTATTTCGAAAGTCACTCTGAGAACATTGCACTGTGTTTTGCTGGAACAACTTATTTCCAACATGTaGCCCAGCCTATTAAAAGAA +
Preference number: 4 (lower is better)
Translates to: QFISKVTLRTLHCVLLEQLISNM*PSLLKE
Trigger: TTCTTTTAATAGGCTGGGCCACATGTTGGAAATAAG...TTGTTCCAGCAAAACACAGTGCAATGTTCTCAGAGTGACTTTCGAAATAAATTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp GCATACCCATGTTTTGCTATAAACTGTATTCCTTTGGCCATATGTAAGCTATCACACATTGTTGGGTTTTaGTTTACTGTACCATCACAT +
Preference number: 4 (lower is better)
Translates to: AYPCFAINCIPLAICKLSHIVGF*FTVPSH
Trigger: ATGTGATGGTACAGTAAACCAAAACCCAACAATGTG...TGATAGCTTACATATGGCCAAAGGAATACAGTTTATAGCAAAACATGGGTATGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp GATCATTTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCCACATTGTTGGGTTTTaGTTTACTGTACCATCACAT +
Preference number: 4 (lower is better)
Translates to: DHLNVSSVRKMQQLNCSLHIVGF*FTVPSH
Trigger: ATGTGATGGTACAGTAAACCAAAACCCAACAATGTG...GAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAAATGATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp TCATTTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATATTGCTCTTTCTTTCTaGCCACATTGTTGGGTTTTG +
Preference number: 4 (lower is better)
Translates to: SFKCFQCPKNATTKLLSHIALSF*PHCWVL
Trigger: CAAAACCCAACAATGTGGCCAGAAAGAAAGAGCAAT...ATGAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAAATGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR TCA 90 bp TCATTTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATTCAGTGAAGCCATGTTaGTACCAATATAGTCCAATA +
Preference number: 4 (lower is better)
Translates to: SFKCFQCPKNATTKLLSHSVKPC*YQYSPI
Trigger: TATTGGACTATATTGGTATCAACATGGCTTCACTGA...ATGAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAAATGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR GCA 90 bp TTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATTTGCTCATTTAAAGCAATCTaGATGCCACTTTTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: LNVSSVRKMQQLNCSLICSFKAI*MPLFFL
Trigger: GAGAAAGAAAAGTGGCATGCAGATTGCTTTAAATGA...GCAAATGAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR GCA 90 bp CAATTTATTTCGAAAGTCACTCTGAGAACATTGCACTGTGTTTTGCTGGAACAATCATTTAAAGCAATCTaGATGCCACTTTTCTTTCTC +
Preference number: 4 (lower is better)
Translates to: QFISKVTLRTLHCVLLEQSFKAI*MPLFFL
Trigger: GAGAAAGAAAAGTGGCATGCAGATTGCTTTAAATGA...TTGTTCCAGCAAAACACAGTGCAATGTTCTCAGAGTGACTTTCGAAATAAATTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR GCA 90 bp GATCATTTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCCTGATTTTCTTTCCATaGCGTAAACAGCTCATAAAA +
Preference number: 4 (lower is better)
Translates to: DHLNVSSVRKMQQLNCSLLIFFP*RKQLIK
Trigger: TTTTATGAGCTGTTTACGGCATGGAAAGAAAATCAG...GAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAAATGATC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR GCA 90 bp TTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATTTGCCTGATTTTCTTTCCATaGCGTAAACAGCTCATAAAA +
Preference number: 4 (lower is better)
Translates to: LNVSSVRKMQQLNCSLICLIFFP*RKQLIK
Trigger: TTTTATGAGCTGTTTACGGCATGGAAAGAAAATCAG...GCAAATGAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp TCATTTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATTACTGCTGTCCATTTTaGAACCCCAATTCCTTTAAT +
Preference number: 4 (lower is better)
Translates to: SFKCFQCPKNATTKLLSHYCCPF*NPNSFN
Trigger: ATTAAAGGAATTGGGGTTCCAAAATGGACAGCAGTA...ATGAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAAATGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp GATCATTTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCAGCTGTATTTATTACTaGAACGGAAGTTGTCATATC +
Preference number: 4 (lower is better)
Translates to: DHLNVSSVRKMQQLNCSLSCIYY*NGSCHI
Trigger: GATATGACAACTTCCGTTCCAGTAATAAATACAGCT...GAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAAATGATC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp TTCAAGATGAGCTGTATTTATTACTGGAACGGAAGTTGTCATATCCGTGATCATAGCTGTATTTATTACTaGAACGGAAGTTGTCATATC +
Preference number: 4 (lower is better)
Translates to: FKMSCIYYWNGSCHIRDHSCIYY*NGSCHI
Trigger: GATATGACAACTTCCGTTCCAGTAATAAATACAGCT...ATGATCACGGATATGACAACTTCCGTTCCAGTAATAAATACAGCTCATCTTGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645696.1
CDS-3UTR CCA 90 bp GCATACCCATGTTTTGCTATAAACTGTATTCCTTTGGCCATATGTAAGCTATCAAGCTGTATTTATTACTaGAACGGAAGTTGTCATATC +
Preference number: 4 (lower is better)
Translates to: AYPCFAINCIPLAICKLSSCIYY*NGSCHI
Trigger: GATATGACAACTTCCGTTCCAGTAATAAATACAGCT...TGATAGCTTACATATGGCCAAAGGAATACAGTTTATAGCAAAACATGGGTATGC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CCA 90 bp AAGTGTTGTGTGAATATCCTGGAAGTTGTTAAGAGCTATGTTGAAGTGCTAACTTTGTTTGTGACATGTTaGTTACATATTGCAGAATGC +
Preference number: 4 (lower is better)
Translates to: KCCVNILEVVKSYVEVLTLFVTC*LHIAEC
Trigger: GCATTCTGCAATATGTAACCAACATGTCACAAACAA...AGTTAGCACTTCAACATAGCTCTTAACAACTTCCAGGATATTCACACAACACTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
3UTR CAA 72 bp ATTATTGCTCTTTCTTTCTGGCCACATTGTTGGGTTTaGGTTTACTGTACCATCACATTCAATATTGACAGA +
Preference number: 4 (lower is better)
Translates to: IIALSFWPHCWV*VYCTITFNIDR
Trigger: TCTGTCAATATTGAATGTGATGGTACAGTAAACCAAAACCCAACAATGTGGCCAGAAAGAAAGAGCAATAAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
3UTR CAA 72 bp ACAGCATACCCATGTTTTGCTATAAACTGTATTCCTTaGGCCATATGTAAGCTATCAATACTAAAAGGTGTT +
Preference number: 4 (lower is better)
Translates to: TAYPCFAINCIP*AICKLSILKGV
Trigger: AACACCTTTTAGTATTGATAGCTTACATATGGCCAAAGGAATACAGTTTATAGCAAAACATGGGTATGCTGT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS CCA 90 bp ACCACCTTCCCGGGAGGCGGAACCCAGCTGGGTTCCAGCCTGCTCTaGGAGAGGAGCACGCCTCCCTTGAGCTGCAGGCGGGTCCGGCTC +
Preference number: 5 (lower is better)
Translates to: TTFPGGGTQLGSSLL*ERSTPPLSCRRVRL
Trigger: GAGCCGGACCCGCCTGCAGCTCAAGGGAGGCGTGCTCCTCTCCCAGAGCAGGCTGGAACCCAGCTGGGTTCCGCCTCCCGGGAAGGTGGT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377211.8
CDS GCA 90 bp CCAGCGCAACCAGGGCGCGTCCGCACAGACTTGGAGGCGGCTGCATaGTGCTACCTGCTCCAGAAGGCGTCCGGTGGCCGCTCCGCAGTT +
Preference number: 5 (lower is better)
Translates to: PAQPGRVRTDLEAAA*CYLLQKASGGRSAV
Trigger: AACTGCGGAGCGGCCACCGGACGCCTTCTGGAGCAGGTAGCAGCATGCAGCCGCCTCCAAGTCTGTGCGGACGCGCCCTGGTTGCGCTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000626030.1
ENST00000643890.1
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS GCA 90 bp AGAACCAGCGCAACCAGGGCGCGTCCGCACAGACTTGGAGGCGGCTaGATGCTGCTACCTGCTCCAGAAGGCGTCCGGTGGCCGCTCCGC +
Preference number: 5 (lower is better)
Translates to: RTSATRARPHRLGGG*MLLPAPEGVRWPLR
Trigger: GCGGAGCGGCCACCGGACGCCTTCTGGAGCAGGTAGCAGCATGCAGCCGCCTCCAAGTCTGTGCGGACGCGCCCTGGTTGCGCTGGTTCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000626030.1
ENST00000643890.1
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS GCA 90 bp CAGGGCGCGTCCGCACAGACTTGGAGGCGGCTGCATGCTGCTACCTaGTCCAGAAGGCGTCCGGTGGCCGCTCCGCAGTTTCAGAGCCCC +
Preference number: 5 (lower is better)
Translates to: QGASAQTWRRLHAAT*SRRRPVAAPQFQSP
Trigger: GGGGCTCTGAAACTGCGGAGCGGCCACCGGACGCCTTCTGGAGCAGGTAGCAGCATGCAGCCGCCTCCAAGTCTGTGCGGACGCGCCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475537.2
CDS GCA 90 bp CAGGGCGCGTCCGCACAGACTTGGAGGCGGCTGCATGCTGCTACCTaGTCCAGAAGGCGTCCGGTGGCCGCTCCGCAGTTTCAGAGCCTC +
Preference number: 5 (lower is better)
Translates to: QGASAQTWRRLHAAT*SRRRPVAAPQFQSL
Trigger: GAGGCTCTGAAACTGCGGAGCGGCCACCGGACGCCTTCTGGAGCAGGTAGCAGCATGCAGCCGCCTCCAAGTCTGTGCGGACGCGCCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377211.8
ENST00000643890.1
CDS GCA 90 bp GCGCAACCAGGGCGCGTCCGCACAGACTTGGAGGCGGCTGCATGCTaGTACCTGCTCCAGAAGGCGTCCGGTGGCCGCTCCGCAGTTTCA +
Preference number: 5 (lower is better)
Translates to: AQPGRVRTDLEAAAC*YLLQKASGGRSAVS
Trigger: TGAAACTGCGGAGCGGCCACCGGACGCCTTCTGGAGCAGGTAGCAGCATGCAGCCGCCTCCAAGTCTGTGCGGACGCGCCCTGGTTGCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000626030.1
ENST00000643890.1
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS GCA 90 bp GGGTCCTTGGCACGGGGGAGGGGAGATGGTGCGTGGCGGAGATCCTaGCGTCCTGTCTCCTTTAGGCACCTCCGCAGGTGCCAACGACCG +
Preference number: 5 (lower is better)
Translates to: GSLARGRGDGAWRRS*RPVSFRHLRRCQRP
Trigger: CGGTCGTTGGCACCTGCGGAGGTGCCTAAAGGAGACAGGACGGCAGGATCTCCGCCACGCACCATCTCCCCTCCCCCGTGCCAAGGACCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000626030.1
ENST00000643890.1
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS CCA 90 bp GCCGCAGGCAAGAACCAGCGCAACCAGGGCGCGTCCGCACAGACTTaGAGGCGGCTGCATGCTGCTACCTGCTCCAGAAGGCGTCCGGTG +
Preference number: 5 (lower is better)
Translates to: AAGKNQRNQGASAQT*RRLHAATCSRRRPV
Trigger: CACCGGACGCCTTCTGGAGCAGGTAGCAGCATGCAGCCGCCTCCAAGTCTGTGCGGACGCGCCCTGGTTGCGCTGGTTCTTGCCTGCGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000626030.1
ENST00000643890.1
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS GCA 90 bp CAGGGCGCGTCCGCACAGACTTGGAGGCGGCTGCATGCTGCTACCTaGTCCAGAAGGCGTCCGGTGGCCGCTCCGCAGTTTCAGAGCCTA +
Preference number: 5 (lower is better)
Translates to: QGASAQTWRRLHAAT*SRRRPVAAPQFQSL
Trigger: TAGGCTCTGAAACTGCGGAGCGGCCACCGGACGCCTTCTGGAGCAGGTAGCAGCATGCAGCCGCCTCCAAGTCTGTGCGGACGCGCCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000626030.1
ENST00000646605.1
ENST00000646607.2
CDS GCA 90 bp CAGGGCGCGTCCGCACAGACTTGGAGGCGGCTGCATGCTGCTACCTaGTCCAGAAGGCGTCCGGTGGCCGCTCCGCAGTTTCAGAGCCAA +
Preference number: 5 (lower is better)
Translates to: QGASAQTWRRLHAAT*SRRRPVAAPQFQSQ
Trigger: TTGGCTCTGAAACTGCGGAGCGGCCACCGGACGCCTTCTGGAGCAGGTAGCAGCATGCAGCCGCCTCCAAGTCTGTGCGGACGCGCCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646948.1
CDS CCA 90 bp TTGAACTCGAAAGACTCCTCCCGGCGGATGAAAGCCGCTACTCCCTaGCTGGCTGAGCTACAGCTCCCGCAGCGCGCCCAGGAGTGCGCC +
Preference number: 5 (lower is better)
Translates to: LNSKDSSRRMKAATP*LAELQLPQRAQECA
Trigger: GGCGCACTCCTGGGCGCGCTGCGGGAGCTGTAGCTCAGCCAGCCAGGGAGTAGCGGCTTTCATCCGCCGGGAGGAGTCTTTCGAGTTCAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475537.2
ENST00000646605.1
CDS GCA 90 bp CACGCCTCCCTTGAGCTGCAGGCGGGTCCGGCTCTGACGAAACGCTaGGAGAATGCCAGACAGTGTAGCCTCCACCGTTTGCTCGGGGTC +
Preference number: 5 (lower is better)
Translates to: HASLELQAGPALTKR*ENARQCSLHRLLGV
Trigger: GACCCCGAGCAAACGGTGGAGGCTACACTGTCTGGCATTCTCGCAGCGTTTCGTCAGAGCCGGACCCGCCTGCAGCTCAAGGGAGGCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377211.8
CDS CCA 90 bp CTTGATCTCGATGGGTCCTTGGCACGGGGGAGGGGAGATGGTGCGTaGCGGAGATCCTGCCGTCCTGTCTCCTTTAGGCACCTCCGCAGG +
Preference number: 5 (lower is better)
Translates to: LDLDGSLARGRGDGA*RRSCRPVSFRHLRR
Trigger: CCTGCGGAGGTGCCTAAAGGAGACAGGACGGCAGGATCTCCGCCACGCACCATCTCCCCTCCCCCGTGCCAAGGACCCATCGAGATCAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000626030.1
ENST00000643890.1
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS TCA 90 bp TGGGAGAGGAGCACGCCTCCCTTGAGCTGCAGGCGGGTCCGGCTCTaGCGAAACGCTGCGAGAATGCCAGACAGTGTAGCCTCCACCGTT +
Preference number: 5 (lower is better)
Translates to: WERSTPPLSCRRVRL*RNAARMPDSVASTV
Trigger: AACGGTGGAGGCTACACTGTCTGGCATTCTCGCAGCGTTTCGTCAGAGCCGGACCCGCCTGCAGCTCAAGGGAGGCGTGCTCCTCTCCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377211.8
CDS CCA 90 bp CTTGGAGGCGGCTGCATGCTGCTACCTGCTCCAGAAGGCGTCCGGTaGCCGCTCCGCAGTTTCAGAGCCCCGCGATTGAACTCGAAAGAC +
Preference number: 5 (lower is better)
Translates to: LGGGCMLLPAPEGVR*PLRSFRAPRLNSKD
Trigger: GTCTTTCGAGTTCAATCGCGGGGCTCTGAAACTGCGGAGCGGCCACCGGACGCCTTCTGGAGCAGGTAGCAGCATGCAGCCGCCTCCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475537.2
CDS CCA 90 bp CTTGGAGGCGGCTGCATGCTGCTACCTGCTCCAGAAGGCGTCCGGTaGCCGCTCCGCAGTTTCAGAGCCAAGTTTCAGATGTCCAGACTC +
Preference number: 5 (lower is better)
Translates to: LGGGCMLLPAPEGVR*PLRSFRAKFQMSRL
Trigger: GAGTCTGGACATCTGAAACTTGGCTCTGAAACTGCGGAGCGGCCACCGGACGCCTTCTGGAGCAGGTAGCAGCATGCAGCCGCCTCCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646948.1
CDS GCA 90 bp CCGCAGCCTCTTCGCCAGTATCCACGCTCAAAAGTAACTCAAGTTTaGGCGCCAGTGGGAAACTTGGCGCTCATGACTCGCCAGCGCGGG +
Preference number: 5 (lower is better)
Translates to: PQPLRQYPRSKVTQV*APVGNLALMTRQRG
Trigger: CCCGCGCTGGCGAGTCATGAGCGCCAAGTTTCCCACTGGCGCGCAAACTTGAGTTACTTTTGAGCGTGGATACTGGCGAAGAGGCTGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626030.1
ENST00000646607.2
CDS CCA 90 bp ACCGTGTTGATGTATTTGAAAGTCTCCTTGATCTCGATGGGTCCTTaGCACGGGGGAGGGGAGATGGTGCGTGGCGGAGATCCTGCCGTC +
Preference number: 5 (lower is better)
Translates to: TVLMYLKVSLISMGP*HGGGEMVRGGDPAV
Trigger: GACGGCAGGATCTCCGCCACGCACCATCTCCCCTCCCCCGTGCCAAGGACCCATCGAGATCAAGGAGACTTTCAAATACATCAACACGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000626030.1
ENST00000643890.1
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS CCA 90 bp CGGAGATTCGGAAACCCGCAGAGACTTCTCAAGTCAGCAGGAACTTaGAAACCGCTGTTCCCTCCAAACGGCTTCAAACACTCGCGCTCC +
Preference number: 5 (lower is better)
Translates to: RRFGNPQRLLKSAGT*KPLFPPNGFKHSRS
Trigger: GGAGCGCGAGTGTTTGAAGCCGTTTGGAGGGAACAGCGGTTTCCAAGTTCCTGCTGACTTGAGAAGTCTCTGCGGGTTTCCGAATCTCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475537.2
ENST00000646605.1
CDS-3UTR CAA 90 bp TTGTCATGTGGACACTGCACCAGGCAGTTCACAGTCTTTATTATGAGGTCACTGCTGCAACCTTTCCCCTaGGGCGATGCCTGGACAGCA +
Preference number: 5 (lower is better)
Translates to: LSCGHCTRQFTVFIMRSLLQPFP*GDAWTA
Trigger: TGCTGTCCAGGCATCGCCCAAGGGGAAAGGTTGCAG...CAGTGACCTCATAATAAAGACTGTGAACTGCCTGGTGCAGTGTCCACATGACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377211.8
CDS-3UTR CAA 90 bp AGGCAGTTCACAGTCTTTATTATGAGGTCACTGGCATCTCTCCATCGTAAAGCTGATCTCGATGGGTCCTaGGCACGGGGGAGGGGAGAT +
Preference number: 5 (lower is better)
Translates to: RQFTVFIMRSLASLHRKADLDGS*ARGRGD
Trigger: ATCTCCCCTCCCCCGTGCCAAGGACCCATCGAGATC...AGCTTTACGATGGAGAGATGCCAGTGACCTCATAATAAAGACTGTGAACTGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CAA 90 bp GATCATTTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCAGGAGCACGCCTCCCTaGAGCTGCAGGCGGGTCCGG +
Preference number: 5 (lower is better)
Translates to: DHLNVSSVRKMQQLNCSLRSTPP*SCRRVR
Trigger: CCGGACCCGCCTGCAGCTCAAGGGAGGCGTGCTCCT...GAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAAATGATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377211.8
CDS-3UTR CAA 90 bp AAGTGTAATGATTTTCAAAAACAGCCTTGCTCTTTCTGTTACTCCCTCCTGATCCGCGTCCGCACAGACTaGGAGGCGGCTGCATGCTGC +
Preference number: 5 (lower is better)
Translates to: KCNDFQKQPCSFCYSLLIRVRTD*EAAACC
Trigger: GCAGCATGCAGCCGCCTCCAAGTCTGTGCGGACGCG...GATCAGGAGGGAGTAACAGAAAGAGCAAGGCTGTTTTTGAAAATCATTACACTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CAA 90 bp TTGTCATGTGGACACTGCACCAGGCAGTTCACAGTCTTTATTATGAGGTCACTGGTGCTACCTGCCCCTTaGTCATGTGGACACTGCACC +
Preference number: 5 (lower is better)
Translates to: LSCGHCTRQFTVFIMRSLVLPAP*SCGHCT
Trigger: GGTGCAGTGTCCACATGACAAAGGGGCAGGTAGCAC...CAGTGACCTCATAATAAAGACTGTGAACTGCCTGGTGCAGTGTCCACATGACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CAA 90 bp AAGTGTTGTGTGAATATCCTGGAAGTTGTTAAGAGCTATGTTGAAGTGCTAACTCGCGTCCGCACAGACTaGGAGGCGGCTGCATGCTGC +
Preference number: 5 (lower is better)
Translates to: KCCVNILEVVKSYVEVLTRVRTD*EAAACC
Trigger: GCAGCATGCAGCCGCCTCCAAGTCTGTGCGGACGCG...AGTTAGCACTTCAACATAGCTCTTAACAACTTCCAGGATATTCACACAACACTT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CAA 90 bp ATTATTGCTCTTTCTTTCTGGCCACATTGTTGGGTTTTGGTTTACTGTACCATCCGCGCCAGACTGGCGTaGGAACCCTTGGGCCATAAG +
Preference number: 5 (lower is better)
Translates to: IIALSFWPHCWVLVYCTIRARLA*EPLGHK
Trigger: CTTATGGCCCAAGGGTTCCAACGCCAGTCTGGCGCG...GATGGTACAGTAAACCAAAACCCAACAATGTGGCCAGAAAGAAAGAGCAATAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CAA 90 bp ATTATTGCTCTTTCTTTCTGGCCACATTGTTGGGTTTTGGTTTACTGTACCATCGATCTCGATGGGTCCTaGGCACGGGGGAGGGGAGAT +
Preference number: 5 (lower is better)
Translates to: IIALSFWPHCWVLVYCTIDLDGS*ARGRGD
Trigger: ATCTCCCCTCCCCCGTGCCAAGGACCCATCGAGATC...GATGGTACAGTAAACCAAAACCCAACAATGTGGCCAGAAAGAAAGAGCAATAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CAA 90 bp AAGTGTAATGATTTTCAAAAACAGCCTTGCTCTTTCTGTTACTCCCTCCTGATCGATCTCGATGGGTCCTaGGCACGGGGGAGGGGAGAT +
Preference number: 5 (lower is better)
Translates to: KCNDFQKQPCSFCYSLLIDLDGS*ARGRGD
Trigger: ATCTCCCCTCCCCCGTGCCAAGGACCCATCGAGATC...GATCAGGAGGGAGTAACAGAAAGAGCAAGGCTGTTTTTGAAAATCATTACACTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CAA 90 bp TTGTCATGTGGACACTGCACCAGGCAGTTCACAGTCTTTATTATGAGGTCACTGCTGGCGATCAAGATATaGGGACCGTTTCGCATGCAC +
Preference number: 5 (lower is better)
Translates to: LSCGHCTRQFTVFIMRSLLAIKI*GPFRMH
Trigger: GTGCATGCGAAACGGTCCCAATATCTTGATCGCCAG...CAGTGACCTCATAATAAAGACTGTGAACTGCCTGGTGCAGTGTCCACATGACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CAA 90 bp GGAACGCACAAAGCTAAGAGGTTCTTACGGTCTCAAAAAGCAGTTTTGCCTCTAAGGCAAAAGACGGTTTaGGCCACTTCCCGTCTCTGC +
Preference number: 5 (lower is better)
Translates to: GTHKAKRFLRSQKAVLPLRQKTV*ATSRLC
Trigger: GCAGAGACGGGAAGTGGCCAAAACCGTCTTTTGCCT...TAGAGGCAAAACTGCTTTTTGAGACCGTAAGAACCTCTTAGCTTTGTGCGTTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CAA 90 bp CTTTCTGGCCACATTGTTGGGTTTTGGTTTACTGTACCATCACATTCAATATTGGCGCCAGTGGGAAACTaGGCGCTCATGACTCGCCAG +
Preference number: 5 (lower is better)
Translates to: LSGHIVGFWFTVPSHSILAPVGN*ALMTRQ
Trigger: CTGGCGAGTCATGAGCGCCAAGTTTCCCACTGGCGC...CAATATTGAATGTGATGGTACAGTAAACCAAAACCCAACAATGTGGCCAGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646607.2
CDS-3UTR CAA 90 bp GATCATTTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCTGTAGCCTCCACCGTTaGCTCGGGGTCTCTGCTGCC +
Preference number: 5 (lower is better)
Translates to: DHLNVSSVRKMQQLNCSLCSLHR*LGVSAA
Trigger: GGCAGCAGAGACCCCGAGCAAACGGTGGAGGCTACA...GAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAAATGATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377211.8
CDS-3UTR CAA 90 bp GCATACCCATGTTTTGCTATAAACTGTATTCCTTTGGCCATATGTAAGCTATCACGCGCCAGACTGGCGTaGGAACCCTTGGGCCATAAG +
Preference number: 5 (lower is better)
Translates to: AYPCFAINCIPLAICKLSRARLA*EPLGHK
Trigger: CTTATGGCCCAAGGGTTCCAACGCCAGTCTGGCGCG...TGATAGCTTACATATGGCCAAAGGAATACAGTTTATAGCAAAACATGGGTATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CAA 90 bp AAGTGTTGTGTGAATATCCTGGAAGTTGTTAAGAGCTATGTTGAAGTGCTAACTCGCGCCAGACTGGCGTaGGAACCCTTGGGCCATAAG +
Preference number: 5 (lower is better)
Translates to: KCCVNILEVVKSYVEVLTRARLA*EPLGHK
Trigger: CTTATGGCCCAAGGGTTCCAACGCCAGTCTGGCGCG...AGTTAGCACTTCAACATAGCTCTTAACAACTTCCAGGATATTCACACAACACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CAA 90 bp TTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATTTGCCGCGCCAGACTGGCGTaGGAACCCTTGGGCCATAAG +
Preference number: 5 (lower is better)
Translates to: LNVSSVRKMQQLNCSLICRARLA*EPLGHK
Trigger: CTTATGGCCCAAGGGTTCCAACGCCAGTCTGGCGCG...GCAAATGAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CAA 90 bp TTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATTTGCGATCTCGATGGGTCCTaGGCACGGGGGAGGGGAGAT +
Preference number: 5 (lower is better)
Translates to: LNVSSVRKMQQLNCSLICDLDGS*ARGRGD
Trigger: ATCTCCCCTCCCCCGTGCCAAGGACCCATCGAGATC...GCAAATGAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CAA 90 bp GATCATTTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCGATCTCGATGGGTCCTaGGCACGGGGGAGGGGAGAT +
Preference number: 5 (lower is better)
Translates to: DHLNVSSVRKMQQLNCSLDLDGS*ARGRGD
Trigger: ATCTCCCCTCCCCCGTGCCAAGGACCCATCGAGATC...GAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAAATGATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CAA 90 bp GATCATTTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCCTCTCAGGATCCACGTaGCTCGGGCTGGCCAGAGTC +
Preference number: 5 (lower is better)
Translates to: DHLNVSSVRKMQQLNCSLLSGST*LGLARV
Trigger: GACTCTGGCCAGCCCGAGCAACGTGGATCCTGAGAG...GAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAAATGATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646948.1
CDS-3UTR CAA 90 bp TCATTTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATCGCGCCAGACTGGCGTaGGAACCCTTGGGCCATAAG +
Preference number: 5 (lower is better)
Translates to: SFKCFQCPKNATTKLLSHRARLA*EPLGHK
Trigger: CTTATGGCCCAAGGGTTCCAACGCCAGTCTGGCGCG...ATGAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAAATGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CAA 90 bp ATTATTGCTCTTTCTTTCTGGCCACATTGTTGGGTTTTGGTTTACTGTACCATCGTGCTACCTGCCCCTTaGTCATGTGGACACTGCACC +
Preference number: 5 (lower is better)
Translates to: IIALSFWPHCWVLVYCTIVLPAP*SCGHCT
Trigger: GGTGCAGTGTCCACATGACAAAGGGGCAGGTAGCAC...GATGGTACAGTAAACCAAAACCCAACAATGTGGCCAGAAAGAAAGAGCAATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CAA 90 bp AAGTGTTGTGTGAATATCCTGGAAGTTGTTAAGAGCTATGTTGAAGTGCTAACTAGGAAGACAGGACACTaGGGTCAGCTGCCCGAGCCA +
Preference number: 5 (lower is better)
Translates to: KCCVNILEVVKSYVEVLTRKTGH*GQLPEP
Trigger: TGGCTCGGGCAGCTGACCCAAGTGTCCTGTCTTCCT...AGTTAGCACTTCAACATAGCTCTTAACAACTTCCAGGATATTCACACAACACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646607.2
CDS-3UTR CAA 90 bp CTTTCTGGCCACATTGTTGGGTTTTGGTTTACTGTACCATCACATTCAATATTGGTCAAGCTCTGCATTTaGCCCCGCAGGGGAACCTCT +
Preference number: 5 (lower is better)
Translates to: LSGHIVGFWFTVPSHSILVKLCI*PRRGTS
Trigger: AGAGGTTCCCCTGCGGGGCAAAATGCAGAGCTTGAC...CAATATTGAATGTGATGGTACAGTAAACCAAAACCCAACAATGTGGCCAGAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000646605.1
CDS-3UTR CAA 90 bp AAGTGTAATGATTTTCAAAAACAGCCTTGCTCTTTCTGTTACTCCCTCCTGATCCTGGCGTTGGAACCCTaGGGCCATAAGGTCTTAGTG +
Preference number: 5 (lower is better)
Translates to: KCNDFQKQPCSFCYSLLILALEP*GHKVLV
Trigger: CACTAAGACCTTATGGCCCAAGGGTTCCAACGCCAG...GATCAGGAGGGAGTAACAGAAAGAGCAAGGCTGTTTTTGAAAATCATTACACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CAA 90 bp CTTTCTGGCCACATTGTTGGGTTTTGGTTTACTGTACCATCACATTCAATATTGCTGGCGTTGGAACCCTaGGGCCATAAGGTCTTAGTG +
Preference number: 5 (lower is better)
Translates to: LSGHIVGFWFTVPSHSILLALEP*GHKVLV
Trigger: CACTAAGACCTTATGGCCCAAGGGTTCCAACGCCAG...CAATATTGAATGTGATGGTACAGTAAACCAAAACCCAACAATGTGGCCAGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CAA 90 bp CTTTCTGGCCACATTGTTGGGTTTTGGTTTACTGTACCATCACATTCAATATTGAGGCAAAAGACGGTTTaGGCCACTTCCCGTCTCTGC +
Preference number: 5 (lower is better)
Translates to: LSGHIVGFWFTVPSHSILRQKTV*ATSRLC
Trigger: GCAGAGACGGGAAGTGGCCAAAACCGTCTTTTGCCT...CAATATTGAATGTGATGGTACAGTAAACCAAAACCCAACAATGTGGCCAGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CAA 90 bp TTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATTTGCGTGCTACCTGCCCCTTaGTCATGTGGACACTGCACC +
Preference number: 5 (lower is better)
Translates to: LNVSSVRKMQQLNCSLICVLPAP*SCGHCT
Trigger: GGTGCAGTGTCCACATGACAAAGGGGCAGGTAGCAC...GCAAATGAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CAA 90 bp GCATACCCATGTTTTGCTATAAACTGTATTCCTTTGGCCATATGTAAGCTATCAGTGCTACCTGCCCCTTaGTCATGTGGACACTGCACC +
Preference number: 5 (lower is better)
Translates to: AYPCFAINCIPLAICKLSVLPAP*SCGHCT
Trigger: GGTGCAGTGTCCACATGACAAAGGGGCAGGTAGCAC...TGATAGCTTACATATGGCCAAAGGAATACAGTTTATAGCAAAACATGGGTATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CAA 90 bp AAGTGTAATGATTTTCAAAAACAGCCTTGCTCTTTCTGTTACTCCCTCCTGATCCAAGTCAGCAGGAACTaGGAAACCGCTGTTCCCTCC +
Preference number: 5 (lower is better)
Translates to: KCNDFQKQPCSFCYSLLIQVSRN*ETAVPS
Trigger: GGAGGGAACAGCGGTTTCCAAGTTCCTGCTGACTTG...GATCAGGAGGGAGTAACAGAAAGAGCAAGGCTGTTTTTGAAAATCATTACACTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000475537.2
ENST00000646605.1
CDS-3UTR CAA 90 bp AAGTGTAATGATTTTCAAAAACAGCCTTGCTCTTTCTGTTACTCCCTCCTGATCCATTATCTCTGCGGTTaGCAAAAGCGGAGTGGCCCT +
Preference number: 5 (lower is better)
Translates to: KCNDFQKQPCSFCYSLLIHYLCG*QKRSGP
Trigger: AGGGCCACTCCGCTTTTGCAAACCGCAGAGATAATG...GATCAGGAGGGAGTAACAGAAAGAGCAAGGCTGTTTTTGAAAATCATTACACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CAA 90 bp GCATACCCATGTTTTGCTATAAACTGTATTCCTTTGGCCATATGTAAGCTATCACTGGCGTTGGAACCCTaGGGCCATAAGGTCTTAGTG +
Preference number: 5 (lower is better)
Translates to: AYPCFAINCIPLAICKLSLALEP*GHKVLV
Trigger: CACTAAGACCTTATGGCCCAAGGGTTCCAACGCCAG...TGATAGCTTACATATGGCCAAAGGAATACAGTTTATAGCAAAACATGGGTATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CAA 90 bp GATCATTTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCCTGGCGTTGGAACCCTaGGGCCATAAGGTCTTAGTG +
Preference number: 5 (lower is better)
Translates to: DHLNVSSVRKMQQLNCSLLALEP*GHKVLV
Trigger: CACTAAGACCTTATGGCCCAAGGGTTCCAACGCCAG...GAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAAATGATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CAA 90 bp TTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATTTGCCTGGCGTTGGAACCCTaGGGCCATAAGGTCTTAGTG +
Preference number: 5 (lower is better)
Translates to: LNVSSVRKMQQLNCSLICLALEP*GHKVLV
Trigger: CACTAAGACCTTATGGCCCAAGGGTTCCAACGCCAG...GCAAATGAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CAA 90 bp GGAACGCACAAAGCTAAGAGGTTCTTACGGTCTCAAAAAGCAGTTTTGCCTCTATATTTGAAAGTCTCCTaGATCTCGATGGGTCCTTGG +
Preference number: 5 (lower is better)
Translates to: GTHKAKRFLRSQKAVLPLYLKVS*ISMGPW
Trigger: CCAAGGACCCATCGAGATCAAGGAGACTTTCAAATA...TAGAGGCAAAACTGCTTTTTGAGACCGTAAGAACCTCTTAGCTTTGTGCGTTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CAA 90 bp AAGTGTAATGATTTTCAAAAACAGCCTTGCTCTTTCTGTTACTCCCTCCTGATCCTGGCGATCAAGATATaGGGACCGTTTCGCATGCAC +
Preference number: 5 (lower is better)
Translates to: KCNDFQKQPCSFCYSLLILAIKI*GPFRMH
Trigger: GTGCATGCGAAACGGTCCCAATATCTTGATCGCCAG...GATCAGGAGGGAGTAACAGAAAGAGCAAGGCTGTTTTTGAAAATCATTACACTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CAA 90 bp ATTATTGCTCTTTCTTTCTGGCCACATTGTTGGGTTTTGGTTTACTGTACCATCCTGGCGATCAAGATATaGGGACCGTTTCGCATGCAC +
Preference number: 5 (lower is better)
Translates to: IIALSFWPHCWVLVYCTILAIKI*GPFRMH
Trigger: GTGCATGCGAAACGGTCCCAATATCTTGATCGCCAG...GATGGTACAGTAAACCAAAACCCAACAATGTGGCCAGAAAGAAAGAGCAATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CAA 90 bp AAGTGTTGTGTGAATATCCTGGAAGTTGTTAAGAGCTATGTTGAAGTGCTAACTAGGCAAAAGACGGTTTaGGCCACTTCCCGTCTCTGC +
Preference number: 5 (lower is better)
Translates to: KCCVNILEVVKSYVEVLTRQKTV*ATSRLC
Trigger: GCAGAGACGGGAAGTGGCCAAAACCGTCTTTTGCCT...AGTTAGCACTTCAACATAGCTCTTAACAACTTCCAGGATATTCACACAACACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CAA 90 bp TTGTCATGTGGACACTGCACCAGGCAGTTCACAGTCTTTATTATGAGGTCACTGCCACATTGTTGGGTTTaGGTTTACTGTACCATCACA +
Preference number: 5 (lower is better)
Translates to: LSCGHCTRQFTVFIMRSLPHCWV*VYCTIT
Trigger: TGTGATGGTACAGTAAACCAAAACCCAACAATGTGG...CAGTGACCTCATAATAAAGACTGTGAACTGCCTGGTGCAGTGTCCACATGACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CAA 90 bp TTGTCATGTGGACACTGCACCAGGCAGTTCACAGTCTTTATTATGAGGTCACTGTTCTTTCTGGCCACATaGTTGGGTTTTGGTTTACTG +
Preference number: 5 (lower is better)
Translates to: LSCGHCTRQFTVFIMRSLFFLAT*LGFGLL
Trigger: CAGTAAACCAAAACCCAACAATGTGGCCAGAAAGAA...CAGTGACCTCATAATAAAGACTGTGAACTGCCTGGTGCAGTGTCCACATGACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CAA 90 bp AAGTGTTGTGTGAATATCCTGGAAGTTGTTAAGAGCTATGTTGAAGTGCTAACTCAAGTCAGCAGGAACTaGGAAACCGCTGTTCCCTCC +
Preference number: 5 (lower is better)
Translates to: KCCVNILEVVKSYVEVLTQVSRN*ETAVPS
Trigger: GGAGGGAACAGCGGTTTCCAAGTTCCTGCTGACTTG...AGTTAGCACTTCAACATAGCTCTTAACAACTTCCAGGATATTCACACAACACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475537.2
ENST00000646605.1
CDS-3UTR CAA 90 bp GCATACCCATGTTTTGCTATAAACTGTATTCCTTTGGCCATATGTAAGCTATCACATTATCTCTGCGGTTaGCAAAAGCGGAGTGGCCCT +
Preference number: 5 (lower is better)
Translates to: AYPCFAINCIPLAICKLSHYLCG*QKRSGP
Trigger: AGGGCCACTCCGCTTTTGCAAACCGCAGAGATAATG...TGATAGCTTACATATGGCCAAAGGAATACAGTTTATAGCAAAACATGGGTATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CAA 90 bp TTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATTTGCCATTATCTCTGCGGTTaGCAAAAGCGGAGTGGCCCT +
Preference number: 5 (lower is better)
Translates to: LNVSSVRKMQQLNCSLICHYLCG*QKRSGP
Trigger: AGGGCCACTCCGCTTTTGCAAACCGCAGAGATAATG...GCAAATGAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CAA 90 bp GATCATTTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCCTGGCGATCAAGATATaGGGACCGTTTCGCATGCAC +
Preference number: 5 (lower is better)
Translates to: DHLNVSSVRKMQQLNCSLLAIKI*GPFRMH
Trigger: GTGCATGCGAAACGGTCCCAATATCTTGATCGCCAG...GAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAAATGATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CAA 90 bp CAATTTATTTCGAAAGTCACTCTGAGAACATTGCACTGTGTTTTGCTGGAACAACTGGCGATCAAGATATaGGGACCGTTTCGCATGCAC +
Preference number: 5 (lower is better)
Translates to: QFISKVTLRTLHCVLLEQLAIKI*GPFRMH
Trigger: GTGCATGCGAAACGGTCCCAATATCTTGATCGCCAG...TTGTTCCAGCAAAACACAGTGCAATGTTCTCAGAGTGACTTTCGAAATAAATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CAA 90 bp TTGTCATGTGGACACTGCACCAGGCAGTTCACAGTCTTTATTATGAGGTCACTGATAGCCACCAATCTTTaGCTGTCTTGTAAAACTGCA +
Preference number: 5 (lower is better)
Translates to: LSCGHCTRQFTVFIMRSLIATNL*LSCKTA
Trigger: TGCAGTTTTACAAGACAGCAAAAGATTGGTGGCTAT...CAGTGACCTCATAATAAAGACTGTGAACTGCCTGGTGCAGTGTCCACATGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CAA 90 bp AGGCAGTTCACAGTCTTTATTATGAGGTCACTGGCATCTCTCCATCGTAAAGCTCATGTTGGTTACATATaGCAGAATGCTGAGGTTTGG +
Preference number: 5 (lower is better)
Translates to: RQFTVFIMRSLASLHRKAHVGYI*QNAEVW
Trigger: CCAAACCTCAGCATTCTGCAATATGTAACCAACATG...AGCTTTACGATGGAGAGATGCCAGTGACCTCATAATAAAGACTGTGAACTGCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CAA 90 bp GGAACGCACAAAGCTAAGAGGTTCTTACGGTCTCAAAAAGCAGTTTTGCCTCTAACATTGCACTGTGTTTaGCTGGAACAAAATCAGGAC +
Preference number: 5 (lower is better)
Translates to: GTHKAKRFLRSQKAVLPLTLHCV*LEQNQD
Trigger: GTCCTGATTTTGTTCCAGCAAAACACAGTGCAATGT...TAGAGGCAAAACTGCTTTTTGAGACCGTAAGAACCTCTTAGCTTTGTGCGTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CAA 90 bp TCATTTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATTTCAGAGCCCCGCGATaGAACTCGAAAGACTCCTCC +
Preference number: 5 (lower is better)
Translates to: SFKCFQCPKNATTKLLSHFRAPR*NSKDSS
Trigger: GGAGGAGTCTTTCGAGTTCAATCGCGGGGCTCTGAA...ATGAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAAATGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475537.2
CDS-3UTR CAA 90 bp TTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATTTGCCTCTATACCCCGCGATaGAACTCGAAAGACTCCTCC +
Preference number: 5 (lower is better)
Translates to: LNVSSVRKMQQLNCSLICLYTPR*NSKDSS
Trigger: GGAGGAGTCTTTCGAGTTCAATCGCGGGGTATAGAG...GCAAATGAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646605.1
CDS-3UTR CAA 90 bp GGAACGCACAAAGCTAAGAGGTTCTTACGGTCTCAAAAAGCAGTTTTGCCTCTAATAGCCACCAATCTTTaGCTGTCTTGTAAAACTGCA +
Preference number: 5 (lower is better)
Translates to: GTHKAKRFLRSQKAVLPLIATNL*LSCKTA
Trigger: TGCAGTTTTACAAGACAGCAAAAGATTGGTGGCTAT...TAGAGGCAAAACTGCTTTTTGAGACCGTAAGAACCTCTTAGCTTTGTGCGTTCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CAA 90 bp AGGCAGTTCACAGTCTTTATTATGAGGTCACTGGCATCTCTCCATCGTAAAGCTTTTTCAAAAACAGCCTaGCTCTTTCTGTTACTCCCT +
Preference number: 5 (lower is better)
Translates to: RQFTVFIMRSLASLHRKAFSKTA*LFLLLP
Trigger: AGGGAGTAACAGAAAGAGCAAGGCTGTTTTTGAAAA...AGCTTTACGATGGAGAGATGCCAGTGACCTCATAATAAAGACTGTGAACTGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CAA 90 bp TGGGCCCAATTTATTTCGAAAGTCACTCTGAGAACATTGCACTGTGTTTTGCTGCATGTTGGTTACATATaGCAGAATGCTGAGGTTTGG +
Preference number: 5 (lower is better)
Translates to: WAQFISKVTLRTLHCVLLHVGYI*QNAEVW
Trigger: CCAAACCTCAGCATTCTGCAATATGTAACCAACATG...CAGCAAAACACAGTGCAATGTTCTCAGAGTGACTTTCGAAATAAATTGGGCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CAA 90 bp TTGTCATGTGGACACTGCACCAGGCAGTTCACAGTCTTTATTATGAGGTCACTGCTTGTTTGTGACATGTaGGTTACATATTGCAGAATG +
Preference number: 5 (lower is better)
Translates to: LSCGHCTRQFTVFIMRSLLVCDM*VTYCRM
Trigger: CATTCTGCAATATGTAACCAACATGTCACAAACAAG...CAGTGACCTCATAATAAAGACTGTGAACTGCCTGGTGCAGTGTCCACATGACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CAA 90 bp GCATACCCATGTTTTGCTATAAACTGTATTCCTTTGGCCATATGTAAGCTATCACTAGAGGCCAAGGGCTaGTGTCAAGCTCTGCATTTT +
Preference number: 5 (lower is better)
Translates to: AYPCFAINCIPLAICKLSLEAKG*CQALHF
Trigger: AAAATGCAGAGCTTGACACAAGCCCTTGGCCTCTAG...TGATAGCTTACATATGGCCAAAGGAATACAGTTTATAGCAAAACATGGGTATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646605.1
CDS-3UTR CAA 90 bp CTTTCTGGCCACATTGTTGGGTTTTGGTTTACTGTACCATCACATTCAATATTGTATTTGAAAGTCTCCTaGATCTCGATGGGTCCTTGG +
Preference number: 5 (lower is better)
Translates to: LSGHIVGFWFTVPSHSILYLKVS*ISMGPW
Trigger: CCAAGGACCCATCGAGATCAAGGAGACTTTCAAATA...CAATATTGAATGTGATGGTACAGTAAACCAAAACCCAACAATGTGGCCAGAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CAA 90 bp ATTATTGCTCTTTCTTTCTGGCCACATTGTTGGGTTTTGGTTTACTGTACCATCTATTTGAAAGTCTCCTaGATCTCGATGGGTCCTTGG +
Preference number: 5 (lower is better)
Translates to: IIALSFWPHCWVLVYCTIYLKVS*ISMGPW
Trigger: CCAAGGACCCATCGAGATCAAGGAGACTTTCAAATA...GATGGTACAGTAAACCAAAACCCAACAATGTGGCCAGAAAGAAAGAGCAATAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CAA 90 bp AAGTGTAATGATTTTCAAAAACAGCCTTGCTCTTTCTGTTACTCCCTCCTGATCTATTTGAAAGTCTCCTaGATCTCGATGGGTCCTTGG +
Preference number: 5 (lower is better)
Translates to: KCNDFQKQPCSFCYSLLIYLKVS*ISMGPW
Trigger: CCAAGGACCCATCGAGATCAAGGAGACTTTCAAATA...GATCAGGAGGGAGTAACAGAAAGAGCAAGGCTGTTTTTGAAAATCATTACACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CAA 90 bp AAGTGTAATGATTTTCAAAAACAGCCTTGCTCTTTCTGTTACTCCCTCCTGATCGTCACTCTGAGAACATaGCACTGTGTTTTGCTGGAA +
Preference number: 5 (lower is better)
Translates to: KCNDFQKQPCSFCYSLLIVTLRT*HCVLLE
Trigger: TTCCAGCAAAACACAGTGCAATGTTCTCAGAGTGAC...GATCAGGAGGGAGTAACAGAAAGAGCAAGGCTGTTTTTGAAAATCATTACACTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CAA 90 bp TTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATTTGCTATTTGAAAGTCTCCTaGATCTCGATGGGTCCTTGG +
Preference number: 5 (lower is better)
Translates to: LNVSSVRKMQQLNCSLICYLKVS*ISMGPW
Trigger: CCAAGGACCCATCGAGATCAAGGAGACTTTCAAATA...GCAAATGAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CAA 90 bp CAATTTATTTCGAAAGTCACTCTGAGAACATTGCACTGTGTTTTGCTGGAACAACAGGACACAACCGTGTaGATGTATTTGAAAGTCTCC +
Preference number: 5 (lower is better)
Translates to: QFISKVTLRTLHCVLLEQQDTTV*MYLKVS
Trigger: GGAGACTTTCAAATACATCAACACGGTTGTGTCCTG...TTGTTCCAGCAAAACACAGTGCAATGTTCTCAGAGTGACTTTCGAAATAAATTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CAA 90 bp TTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATTTGCCAGGACACAACCGTGTaGATGTATTTGAAAGTCTCC +
Preference number: 5 (lower is better)
Translates to: LNVSSVRKMQQLNCSLICQDTTV*MYLKVS
Trigger: GGAGACTTTCAAATACATCAACACGGTTGTGTCCTG...GCAAATGAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CAA 90 bp AAGTGTTGTGTGAATATCCTGGAAGTTGTTAAGAGCTATGTTGAAGTGCTAACTCAGGACACAACCGTGTaGATGTATTTGAAAGTCTCC +
Preference number: 5 (lower is better)
Translates to: KCCVNILEVVKSYVEVLTQDTTV*MYLKVS
Trigger: GGAGACTTTCAAATACATCAACACGGTTGTGTCCTG...AGTTAGCACTTCAACATAGCTCTTAACAACTTCCAGGATATTCACACAACACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CAA 90 bp CTTTCTGGCCACATTGTTGGGTTTTGGTTTACTGTACCATCACATTCAATATTGCATGTTGGTTACATATaGCAGAATGCTGAGGTTTGG +
Preference number: 5 (lower is better)
Translates to: LSGHIVGFWFTVPSHSILHVGYI*QNAEVW
Trigger: CCAAACCTCAGCATTCTGCAATATGTAACCAACATG...CAATATTGAATGTGATGGTACAGTAAACCAAAACCCAACAATGTGGCCAGAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CAA 90 bp ATTATTGCTCTTTCTTTCTGGCCACATTGTTGGGTTTTGGTTTACTGTACCATCACATTGCACTGTGTTTaGCTGGAACAAAATCAGGAC +
Preference number: 5 (lower is better)
Translates to: IIALSFWPHCWVLVYCTITLHCV*LEQNQD
Trigger: GTCCTGATTTTGTTCCAGCAAAACACAGTGCAATGT...GATGGTACAGTAAACCAAAACCCAACAATGTGGCCAGAAAGAAAGAGCAATAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CAA 90 bp GATCATTTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCGTCACTCTGAGAACATaGCACTGTGTTTTGCTGGAA +
Preference number: 5 (lower is better)
Translates to: DHLNVSSVRKMQQLNCSLVTLRT*HCVLLE
Trigger: TTCCAGCAAAACACAGTGCAATGTTCTCAGAGTGAC...GAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAAATGATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CAA 90 bp TTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATTTGCGTCACTCTGAGAACATaGCACTGTGTTTTGCTGGAA +
Preference number: 5 (lower is better)
Translates to: LNVSSVRKMQQLNCSLICVTLRT*HCVLLE
Trigger: TTCCAGCAAAACACAGTGCAATGTTCTCAGAGTGAC...GCAAATGAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CAA 90 bp AAGTGTAATGATTTTCAAAAACAGCCTTGCTCTTTCTGTTACTCCCTCCTGATCACCGAGTTAAAGCTCTaGGGCCCAATTTATTTCGAA +
Preference number: 5 (lower is better)
Translates to: KCNDFQKQPCSFCYSLLITELKL*GPIYFE
Trigger: TTCGAAATAAATTGGGCCCAAGAGCTTTAACTCGGT...GATCAGGAGGGAGTAACAGAAAGAGCAAGGCTGTTTTTGAAAATCATTACACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CAA 90 bp TTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATTTGCAAAAGTAACTCAAGTTaGCGCGCCAGTGGGAAACTT +
Preference number: 5 (lower is better)
Translates to: LNVSSVRKMQQLNCSLICKSNSS*RASGKL
Trigger: AAGTTTCCCACTGGCGCGCAAACTTGAGTTACTTTT...GCAAATGAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000646607.2
CDS-3UTR CAA 90 bp GCATACCCATGTTTTGCTATAAACTGTATTCCTTTGGCCATATGTAAGCTATCAACCGTGTTGATGTATTaGAAAGTCTCCTTGATCTCG +
Preference number: 5 (lower is better)
Translates to: AYPCFAINCIPLAICKLSTVLMY*KVSLIS
Trigger: CGAGATCAAGGAGACTTTCAAATACATCAACACGGT...TGATAGCTTACATATGGCCAAAGGAATACAGTTTATAGCAAAACATGGGTATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CAA 90 bp AAGTGTTGTGTGAATATCCTGGAAGTTGTTAAGAGCTATGTTGAAGTGCTAACTACCGTGTTGATGTATTaGAAAGTCTCCTTGATCTCG +
Preference number: 5 (lower is better)
Translates to: KCCVNILEVVKSYVEVLTTVLMY*KVSLIS
Trigger: CGAGATCAAGGAGACTTTCAAATACATCAACACGGT...AGTTAGCACTTCAACATAGCTCTTAACAACTTCCAGGATATTCACACAACACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CAA 90 bp CAATTTATTTCGAAAGTCACTCTGAGAACATTGCACTGTGTTTTGCTGGAACAAACCGTGTTGATGTATTaGAAAGTCTCCTTGATCTCG +
Preference number: 5 (lower is better)
Translates to: QFISKVTLRTLHCVLLEQTVLMY*KVSLIS
Trigger: CGAGATCAAGGAGACTTTCAAATACATCAACACGGT...TTGTTCCAGCAAAACACAGTGCAATGTTCTCAGAGTGACTTTCGAAATAAATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CAA 90 bp TTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATTTGCACCGTGTTGATGTATTaGAAAGTCTCCTTGATCTCG +
Preference number: 5 (lower is better)
Translates to: LNVSSVRKMQQLNCSLICTVLMY*KVSLIS
Trigger: CGAGATCAAGGAGACTTTCAAATACATCAACACGGT...GCAAATGAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CAA 90 bp TCATTTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATCAGGACACAACCGTGTaGATGTATTTGAAAGTCTCC +
Preference number: 5 (lower is better)
Translates to: SFKCFQCPKNATTKLLSHQDTTV*MYLKVS
Trigger: GGAGACTTTCAAATACATCAACACGGTTGTGTCCTG...ATGAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAAATGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CAA 90 bp AAGTGTAATGATTTTCAAAAACAGCCTTGCTCTTTCTGTTACTCCCTCCTGATCATAGCCACCAATCTTTaGCTGTCTTGTAAAACTGCA +
Preference number: 5 (lower is better)
Translates to: KCNDFQKQPCSFCYSLLIIATNL*LSCKTA
Trigger: TGCAGTTTTACAAGACAGCAAAAGATTGGTGGCTAT...GATCAGGAGGGAGTAACAGAAAGAGCAAGGCTGTTTTTGAAAATCATTACACTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CAA 90 bp CTTTCTGGCCACATTGTTGGGTTTTGGTTTACTGTACCATCACATTCAATATTGATAGCCACCAATCTTTaGCTGTCTTGTAAAACTGCA +
Preference number: 5 (lower is better)
Translates to: LSGHIVGFWFTVPSHSILIATNL*LSCKTA
Trigger: TGCAGTTTTACAAGACAGCAAAAGATTGGTGGCTAT...CAATATTGAATGTGATGGTACAGTAAACCAAAACCCAACAATGTGGCCAGAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CAA 90 bp CTTTCTGGCCACATTGTTGGGTTTTGGTTTACTGTACCATCACATTCAATATTGTTTTCAAAAACAGCCTaGCTCTTTCTGTTACTCCCT +
Preference number: 5 (lower is better)
Translates to: LSGHIVGFWFTVPSHSILFSKTA*LFLLLP
Trigger: AGGGAGTAACAGAAAGAGCAAGGCTGTTTTTGAAAA...CAATATTGAATGTGATGGTACAGTAAACCAAAACCCAACAATGTGGCCAGAAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CAA 90 bp AAGTGTTGTGTGAATATCCTGGAAGTTGTTAAGAGCTATGTTGAAGTGCTAACTCATGTTGGTTACATATaGCAGAATGCTGAGGTTTGG +
Preference number: 5 (lower is better)
Translates to: KCCVNILEVVKSYVEVLTHVGYI*QNAEVW
Trigger: CCAAACCTCAGCATTCTGCAATATGTAACCAACATG...AGTTAGCACTTCAACATAGCTCTTAACAACTTCCAGGATATTCACACAACACTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CAA 90 bp AAGTGTTGTGTGAATATCCTGGAAGTTGTTAAGAGCTATGTTGAAGTGCTAACTACATTGCACTGTGTTTaGCTGGAACAAAATCAGGAC +
Preference number: 5 (lower is better)
Translates to: KCCVNILEVVKSYVEVLTTLHCV*LEQNQD
Trigger: GTCCTGATTTTGTTCCAGCAAAACACAGTGCAATGT...AGTTAGCACTTCAACATAGCTCTTAACAACTTCCAGGATATTCACACAACACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CAA 90 bp CAATTTATTTCGAAAGTCACTCTGAGAACATTGCACTGTGTTTTGCTGGAACAAACCGAGTTAAAGCTCTaGGGCCCAATTTATTTCGAA +
Preference number: 5 (lower is better)
Translates to: QFISKVTLRTLHCVLLEQTELKL*GPIYFE
Trigger: TTCGAAATAAATTGGGCCCAAGAGCTTTAACTCGGT...TTGTTCCAGCAAAACACAGTGCAATGTTCTCAGAGTGACTTTCGAAATAAATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CAA 90 bp GCATACCCATGTTTTGCTATAAACTGTATTCCTTTGGCCATATGTAAGCTATCACCACATTGTTGGGTTTaGGTTTACTGTACCATCACA +
Preference number: 5 (lower is better)
Translates to: AYPCFAINCIPLAICKLSPHCWV*VYCTIT
Trigger: TGTGATGGTACAGTAAACCAAAACCCAACAATGTGG...TGATAGCTTACATATGGCCAAAGGAATACAGTTTATAGCAAAACATGGGTATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CAA 90 bp TTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATTTGCTTCTTTCTGGCCACATaGTTGGGTTTTGGTTTACTG +
Preference number: 5 (lower is better)
Translates to: LNVSSVRKMQQLNCSLICFFLAT*LGFGLL
Trigger: CAGTAAACCAAAACCCAACAATGTGGCCAGAAAGAA...GCAAATGAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CAA 90 bp CAATTTATTTCGAAAGTCACTCTGAGAACATTGCACTGTGTTTTGCTGGAACAATTCTTTCTGGCCACATaGTTGGGTTTTGGTTTACTG +
Preference number: 5 (lower is better)
Translates to: QFISKVTLRTLHCVLLEQFFLAT*LGFGLL
Trigger: CAGTAAACCAAAACCCAACAATGTGGCCAGAAAGAA...TTGTTCCAGCAAAACACAGTGCAATGTTCTCAGAGTGACTTTCGAAATAAATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CAA 90 bp TCTTTCAAGATGAGCTGTATTTATTACTGGAACGGAAGTTGTCATATCCGTGATATAGCCACCAATCTTTaGCTGTCTTGTAAAACTGCA +
Preference number: 5 (lower is better)
Translates to: SFKMSCIYYWNGSCHIRDIATNL*LSCKTA
Trigger: TGCAGTTTTACAAGACAGCAAAAGATTGGTGGCTAT...ATCACGGATATGACAACTTCCGTTCCAGTAATAAATACAGCTCATCTTGAAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645696.1
CDS-3UTR CAA 90 bp GATCATTTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATAGCCACCAATCTTTaGCTGTCTTGTAAAACTGCA +
Preference number: 5 (lower is better)
Translates to: DHLNVSSVRKMQQLNCSLIATNL*LSCKTA
Trigger: TGCAGTTTTACAAGACAGCAAAAGATTGGTGGCTAT...GAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAAATGATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CAA 90 bp AAGTGTTGTGTGAATATCCTGGAAGTTGTTAAGAGCTATGTTGAAGTGCTAACTTTTTCAAAAACAGCCTaGCTCTTTCTGTTACTCCCT +
Preference number: 5 (lower is better)
Translates to: KCCVNILEVVKSYVEVLTFSKTA*LFLLLP
Trigger: AGGGAGTAACAGAAAGAGCAAGGCTGTTTTTGAAAA...AGTTAGCACTTCAACATAGCTCTTAACAACTTCCAGGATATTCACACAACACTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CAA 90 bp TCATTTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATCATGTTGGTTACATATaGCAGAATGCTGAGGTTTGG +
Preference number: 5 (lower is better)
Translates to: SFKCFQCPKNATTKLLSHHVGYI*QNAEVW
Trigger: CCAAACCTCAGCATTCTGCAATATGTAACCAACATG...ATGAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAAATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CAA 90 bp AAGTGTAATGATTTTCAAAAACAGCCTTGCTCTTTCTGTTACTCCCTCCTGATCCTTGTTTGTGACATGTaGGTTACATATTGCAGAATG +
Preference number: 5 (lower is better)
Translates to: KCNDFQKQPCSFCYSLLILVCDM*VTYCRM
Trigger: CATTCTGCAATATGTAACCAACATGTCACAAACAAG...GATCAGGAGGGAGTAACAGAAAGAGCAAGGCTGTTTTTGAAAATCATTACACTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CAA 90 bp GCATACCCATGTTTTGCTATAAACTGTATTCCTTTGGCCATATGTAAGCTATCATCTGTTACATGCTGCTaGTTTGTGACATGTTGGTTA +
Preference number: 5 (lower is better)
Translates to: AYPCFAINCIPLAICKLSSVTCC*FVTCWL
Trigger: TAACCAACATGTCACAAACAAGCAGCATGTAACAGA...TGATAGCTTACATATGGCCAAAGGAATACAGTTTATAGCAAAACATGGGTATGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CAA 90 bp TCATTTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATACATTGCACTGTGTTTaGCTGGAACAAAATCAGGAC +
Preference number: 5 (lower is better)
Translates to: SFKCFQCPKNATTKLLSHTLHCV*LEQNQD
Trigger: GTCCTGATTTTGTTCCAGCAAAACACAGTGCAATGT...ATGAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAAATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CAA 90 bp TCATTTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATACCGAGTTAAAGCTCTaGGGCCCAATTTATTTCGAA +
Preference number: 5 (lower is better)
Translates to: SFKCFQCPKNATTKLLSHTELKL*GPIYFE
Trigger: TTCGAAATAAATTGGGCCCAAGAGCTTTAACTCGGT...ATGAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAAATGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CAA 90 bp TCATTTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATTTTTCAAAAACAGCCTaGCTCTTTCTGTTACTCCCT +
Preference number: 5 (lower is better)
Translates to: SFKCFQCPKNATTKLLSHFSKTA*LFLLLP
Trigger: AGGGAGTAACAGAAAGAGCAAGGCTGTTTTTGAAAA...ATGAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAAATGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CAA 90 bp CAATTTATTTCGAAAGTCACTCTGAGAACATTGCACTGTGTTTTGCTGGAACAACTTGTTTGTGACATGTaGGTTACATATTGCAGAATG +
Preference number: 5 (lower is better)
Translates to: QFISKVTLRTLHCVLLEQLVCDM*VTYCRM
Trigger: CATTCTGCAATATGTAACCAACATGTCACAAACAAG...TTGTTCCAGCAAAACACAGTGCAATGTTCTCAGAGTGACTTTCGAAATAAATTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377211.8
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CAA 90 bp AAGTGTTGTGTGAATATCCTGGAAGTTGTTAAGAGCTATGTTGAAGTGCTAACTCTTGTTTGTGACATGTaGGTTACATATTGCAGAATG +
Preference number: 5 (lower is better)
Translates to: KCCVNILEVVKSYVEVLTLVCDM*VTYCRM
Trigger: CATTCTGCAATATGTAACCAACATGTCACAAACAAG...AGTTAGCACTTCAACATAGCTCTTAACAACTTCCAGGATATTCACACAACACTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CAA 90 bp TCATTTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATTCTGTTACATGCTGCTaGTTTGTGACATGTTGGTTA +
Preference number: 5 (lower is better)
Translates to: SFKCFQCPKNATTKLLSHSVTCC*FVTCWL
Trigger: TAACCAACATGTCACAAACAAGCAGCATGTAACAGA...ATGAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAAATGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS-3UTR CAA 90 bp TCATTTAAATGTTTCCAGTGTCCGAAAAATGCAACAACTAAACTGCTCTCTCATCTTGTTTGTGACATGTaGGTTACATATTGCAGAATG +
Preference number: 5 (lower is better)
Translates to: SFKCFQCPKNATTKLLSHLVCDM*VTYCRM
Trigger: CATTCTGCAATATGTAACCAACATGTCACAAACAAG...ATGAGAGAGCAGTTTAGTTGTTGCATTTTTCGGACACTGGAAACATTTAAATGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS TCA 72 bp CTCCCGGCGGATGAAAGCCGCTACTCCCTGGCTGGCTaGGCTACAGCTCCCGCAGCGCGCCCAGGAGTGCGC +
Preference number: 6 (lower is better)
Translates to: LPADESRYSLAG*ATAPAARPGVR
Trigger: GCGCACTCCTGGGCGCGCTGCGGGAGCTGTAGCTCAGCCAGCCAGGGAGTAGCGGCTTTCATCCGCCGGGAG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475537.2
ENST00000646605.1
CDS GCA 72 bp GGGCGCGTCCGCACAGACTTGGAGGCGGCTGCATGCTaGTACCTGCTCCAGAAGGCGTCCGGTGGCCGCTCC +
Preference number: 6 (lower is better)
Translates to: GRVRTDLEAAAC*YLLQKASGGRS
Trigger: GGAGCGGCCACCGGACGCCTTCTGGAGCAGGTAGCAGCATGCAGCCGCCTCCAAGTCTGTGCGGACGCGCCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000626030.1
ENST00000643890.1
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS CAA 90 bp GGCCGCAGGCAAGAACCAGCGCAACCAGGGCGCGTCCGCACAGACTaGGAGGCGGCTGCATGCTGCTACCTGCTCCAGAAGGCGTCCGGT +
Preference number: 6 (lower is better)
Translates to: GRRQEPAQPGRVRTD*EAAACCYLLQKASG
Trigger: ACCGGACGCCTTCTGGAGCAGGTAGCAGCATGCAGCCGCCTCCAAGTCTGTGCGGACGCGCCCTGGTTGCGCTGGTTCTTGCCTGCGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000626030.1
ENST00000643890.1
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS TCA 72 bp GTTCCAGCCTGCTCTGGGAGAGGAGCACGCCTCCCTTaGGCTGCAGGCGGGTCCGGCTCTGACGAAACGCTG +
Preference number: 6 (lower is better)
Translates to: VPACSGRGARLP*AAGGSGSDETL
Trigger: CAGCGTTTCGTCAGAGCCGGACCCGCCTGCAGCTCAAGGGAGGCGTGCTCCTCTCCCAGAGCAGGCTGGAAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377211.8
CDS CCA 72 bp GAATGGAGACCACCTTCCCGGGAGGCGGAACCCAGCTaGGTTCCAGCCTGCTCTGGGAGAGGAGCACGCCTC +
Preference number: 6 (lower is better)
Translates to: EWRPPSREAEPS*VPACSGRGARL
Trigger: GAGGCGTGCTCCTCTCCCAGAGCAGGCTGGAACCCAGCTGGGTTCCGCCTCCCGGGAAGGTGGTCTCCATTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377211.8
CDS CCA 72 bp AAAGACTCCTCCCGGCGGATGAAAGCCGCTACTCCCTaGCTGGCTGAGCTACAGCTCCCGCAGCGCGCCCAG +
Preference number: 6 (lower is better)
Translates to: KDSSRRMKAATP*LAELQLPQRAQ
Trigger: CTGGGCGCGCTGCGGGAGCTGTAGCTCAGCCAGCCAGGGAGTAGCGGCTTTCATCCGCCGGGAGGAGTCTTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475537.2
ENST00000646605.1
CDS GCA 72 bp TCCGCACAGACTTGGAGGCGGCTGCATGCTGCTACCTaGTCCAGAAGGCGTCCGGTGGCCGCTCCGCAGTTT +
Preference number: 6 (lower is better)
Translates to: SAQTWRRLHAAT*SRRRPVAAPQF
Trigger: AAACTGCGGAGCGGCCACCGGACGCCTTCTGGAGCAGGTAGCAGCATGCAGCCGCCTCCAAGTCTGTGCGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000626030.1
ENST00000643890.1
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS CCA 72 bp CCGACCCCGCTGCAACCTTTCCCCTTGGGCGATGCCTaGACAGCATCAGTAGTAGTTGCCCGAGGGAGGGGG +
Preference number: 6 (lower is better)
Translates to: PTPLQPFPLGDA*TASVVVARGRG
Trigger: CCCCCTCCCTCGGGCAACTACTACTGATGCTGTCCAGGCATCGCCCAAGGGGAAAGGTTGCAGCGGGGTCGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377211.8
CDS CCA 72 bp GGCTGCATGCTGCTACCTGCTCCAGAAGGCGTCCGGTaGCCGCTCCGCAGTTTCAGAGCCCCGCGATTGAAC +
Preference number: 6 (lower is better)
Translates to: GCMLLPAPEGVR*PLRSFRAPRLN
Trigger: GTTCAATCGCGGGGCTCTGAAACTGCGGAGCGGCCACCGGACGCCTTCTGGAGCAGGTAGCAGCATGCAGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000475537.2
CDS TCA 72 bp AGCACGCCTCCCTTGAGCTGCAGGCGGGTCCGGCTCTaGCGAAACGCTGCGAGAATGCCAGACAGTGTAGCC +
Preference number: 6 (lower is better)
Translates to: STPPLSCRRVRL*RNAARMPDSVA
Trigger: GGCTACACTGTCTGGCATTCTCGCAGCGTTTCGTCAGAGCCGGACCCGCCTGCAGCTCAAGGGAGGCGTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377211.8
CDS CCA 72 bp AAGAACCAGCGCAACCAGGGCGCGTCCGCACAGACTTaGAGGCGGCTGCATGCTGCTACCTGCTCCAGAAGG +
Preference number: 6 (lower is better)
Translates to: KNQRNQGASAQT*RRLHAATCSRR
Trigger: CCTTCTGGAGCAGGTAGCAGCATGCAGCCGCCTCCAAGTCTGTGCGGACGCGCCCTGGTTGCGCTGGTTCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000626030.1
ENST00000643890.1
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS CAA 72 bp CTCCCGCGCCTTCCGACCCCGCTGCAACCTTTCCCCTaGGGCGATGCCTGGACAGCATCAGTAGTAGTTGCC +
Preference number: 6 (lower is better)
Translates to: LPRLPTPLQPFP*GDAWTASVVVA
Trigger: GGCAACTACTACTGATGCTGTCCAGGCATCGCCCAAGGGGAAAGGTTGCAGCGGGGTCGGAAGGCGCGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377211.8
CDS CAA 72 bp CAAGAACCAGCGCAACCAGGGCGCGTCCGCACAGACTaGGAGGCGGCTGCATGCTGCTACCTGCTCCAGAAG +
Preference number: 6 (lower is better)
Translates to: QEPAQPGRVRTD*EAAACCYLLQK
Trigger: CTTCTGGAGCAGGTAGCAGCATGCAGCCGCCTCCAAGTCTGTGCGGACGCGCCCTGGTTGCGCTGGTTCTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000626030.1
ENST00000643890.1
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS CAA 72 bp ACCTCCGCAGGTGCCAACGACCGCGCCAGACTGGCGTaGGAACCCTTGGGCCATAAGGTCTTAGTGGGTGGC +
Preference number: 6 (lower is better)
Translates to: TSAGANDRARLA*EPLGHKVLVGG
Trigger: GCCACCCACTAAGACCTTATGGCCCAAGGGTTCCAACGCCAGTCTGGCGCGGTCGTTGGCACCTGCGGAGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000626030.1
ENST00000643890.1
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS GCA 72 bp CCTTCCGACCCCGCTGCAACCTTTCCCCTTGGGCGATaGCTGGACAGCATCAGTAGTAGTTGCCCGAGGGAG +
Preference number: 6 (lower is better)
Translates to: PSDPAATFPLGR*LDSISSSCPRE
Trigger: CTCCCTCGGGCAACTACTACTGATGCTGTCCAGGCATCGCCCAAGGGGAAAGGTTGCAGCGGGGTCGGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377211.8
CDS GCA 72 bp CTTGAGCTGCAGGCGGGTCCGGCTCTGACGAAACGCTaGGAGAATGCCAGACAGTGTAGCCTCCACCGTTTG +
Preference number: 6 (lower is better)
Translates to: LELQAGPALTKR*ENARQCSLHRL
Trigger: CAAACGGTGGAGGCTACACTGTCTGGCATTCTCGCAGCGTTTCGTCAGAGCCGGACCCGCCTGCAGCTCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377211.8
CDS CCA 72 bp GTGGCGTCATTATCTCTGCGGTTTGCAAAAGCGGAGTaGCCCTGTCAGGCGGGAAGCCTCTCTCCTCTCCCC +
Preference number: 6 (lower is better)
Translates to: VASLSLRFAKAE*PCQAGSLSPLP
Trigger: GGGGAGAGGAGAGAGGCTTCCCGCCTGACAGGGCCACTCCGCTTTTGCAAACCGCAGAGATAATGACGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000626030.1
ENST00000643890.1
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS CCA 72 bp GGCTGCATGCTGCTACCTGCTCCAGAAGGCGTCCGGTaGCCGCTCCGCAGTTTCAGAGCCAAGTTTCAGATG +
Preference number: 6 (lower is better)
Translates to: GCMLLPAPEGVR*PLRSFRAKFQM
Trigger: CATCTGAAACTTGGCTCTGAAACTGCGGAGCGGCCACCGGACGCCTTCTGGAGCAGGTAGCAGCATGCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646948.1
CDS CAA 90 bp ACCTCCGCAGGTGCCAACGACCGCGCCAGACTGGCGTTGGAACCCTaGGGCCATAAGGTCTTAGTGGGTGGCGTCATTATCTCTGCGGTT +
Preference number: 6 (lower is better)
Translates to: TSAGANDRARLALEP*GHKVLVGGVIISAV
Trigger: AACCGCAGAGATAATGACGCCACCCACTAAGACCTTATGGCCCAAGGGTTCCAACGCCAGTCTGGCGCGGTCGTTGGCACCTGCGGAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000626030.1
ENST00000643890.1
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS CAA 90 bp CCTTTAGGCACCTCCGCAGGTGCCAACGACCGCGCCAGACTGGCGTaGGAACCCTTGGGCCATAAGGTCTTAGTGGGTGGCGTCATTATC +
Preference number: 6 (lower is better)
Translates to: PLGTSAGANDRARLA*EPLGHKVLVGGVII
Trigger: GATAATGACGCCACCCACTAAGACCTTATGGCCCAAGGGTTCCAACGCCAGTCTGGCGCGGTCGTTGGCACCTGCGGAGGTGCCTAAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000626030.1
ENST00000643890.1
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS CAA 90 bp CCCGCAGCCTCTTCGCCAGTATCCACGCTCAAAAGTAACTCAAGTTaGCGCGCCAGTGGGAAACTTGGCGCTCATGACTCGCCAGCGCGG +
Preference number: 6 (lower is better)
Translates to: PAASSPVSTLKSNSS*RASGKLGAHDSPAR
Trigger: CCGCGCTGGCGAGTCATGAGCGCCAAGTTTCCCACTGGCGCGCAAACTTGAGTTACTTTTGAGCGTGGATACTGGCGAAGAGGCTGCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626030.1
ENST00000646607.2
CDS TCA 72 bp CTCAAGTTTGCGCGCCAGTGGGAAACTTGGCGCTCATaGCTCGCCAGCGCGGGTCGAAACTCCTTCCTGATG +
Preference number: 6 (lower is better)
Translates to: LKFARQWETWRS*LASAGRNSFLM
Trigger: CATCAGGAAGGAGTTTCGACCCGCGCTGGCGAGTCATGAGCGCCAAGTTTCCCACTGGCGCGCAAACTTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000646607.2
CDS CAA 72 bp GGTGCCAACGACCGCGCCAGACTGGCGTTGGAACCCTaGGGCCATAAGGTCTTAGTGGGTGGCGTCATTATC +
Preference number: 6 (lower is better)
Translates to: GANDRARLALEP*GHKVLVGGVII
Trigger: GATAATGACGCCACCCACTAAGACCTTATGGCCCAAGGGTTCCAACGCCAGTCTGGCGCGGTCGTTGGCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000626030.1
ENST00000643890.1
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS TCA 72 bp AAGTACCAGTTCCTTCCCAGTGTTCAGCCACTGTGTTaGTCCTCCACGGGGGCCTGCCACACACTGCTCTGG +
Preference number: 6 (lower is better)
Translates to: KYQFLPSVQPLC*SSTGACHTLLW
Trigger: CCAGAGCAGTGTGTGGCAGGCCCCCGTGGAGGATCAACACAGTGGCTGAACACTGGGAAGGAACTGGTACTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000646948.1
CDS CAA 90 bp AACCGTGTTGATGTATTTGAAAGTCTCCTTGATCTCGATGGGTCCTaGGCACGGGGGAGGGGAGATGGTGCGTGGCGGAGATCCTGCCGT +
Preference number: 6 (lower is better)
Translates to: NRVDVFESLLDLDGS*ARGRGDGAWRRSCR
Trigger: ACGGCAGGATCTCCGCCACGCACCATCTCCCCTCCCCCGTGCCAAGGACCCATCGAGATCAAGGAGACTTTCAAATACATCAACACGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000626030.1
ENST00000643890.1
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS CAA 72 bp CGCTGCGAGAATGCCAGACAGTGTAGCCTCCACCGTTaGCTCGGGGTCTCTGCTGCCATCAGACAAGTACTT +
Preference number: 6 (lower is better)
Translates to: RCENARQCSLHR*LGVSAAIRQVL
Trigger: AAGTACTTGTCTGATGGCAGCAGAGACCCCGAGCAAACGGTGGAGGCTACACTGTCTGGCATTCTCGCAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377211.8
CDS GCA 72 bp GCTGCGAGAATGCCAGACAGTGTAGCCTCCACCGTTTaGTCGGGGTCTCTGCTGCCATCAGACAAGTACTTT +
Preference number: 6 (lower is better)
Translates to: AARMPDSVASTV*SGSLLPSDKYF
Trigger: AAAGTACTTGTCTGATGGCAGCAGAGACCCCGAGCAAACGGTGGAGGCTACACTGTCTGGCATTCTCGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377211.8
CDS CAA 72 bp TCAAAAGTAACTCAAGTTTGCGCGCCAGTGGGAAACTaGGCGCTCATGACTCGCCAGCGCGGGTCGAAACTC +
Preference number: 6 (lower is better)
Translates to: SKVTQVCAPVGN*ALMTRQRGSKL
Trigger: GAGTTTCGACCCGCGCTGGCGAGTCATGAGCGCCAAGTTTCCCACTGGCGCGCAAACTTGAGTTACTTTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646607.2
CDS CAA 90 bp ATCCCCAGCACGAACACAAGGCAGGACACAACCGTGTTGATGTATTaGAAAGTCTCCTTGATCTCGATGGGTCCTTGGCACGGGGGAGGG +
Preference number: 6 (lower is better)
Translates to: IPSTNTRQDTTVLMY*KVSLISMGPWHGGG
Trigger: CCCTCCCCCGTGCCAAGGACCCATCGAGATCAAGGAGACTTTCAAATACATCAACACGGTTGTGTCCTGCCTTGTGTTCGTGCTGGGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000626030.1
ENST00000643890.1
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS CAA 90 bp TATCCACGCTCAAAAGTAACTCAAGTTTGCGCGCCAGTGGGAAACTaGGCGCTCATGACTCGCCAGCGCGGGTCGAAACTCCTTCCTGAT +
Preference number: 6 (lower is better)
Translates to: YPRSKVTQVCAPVGN*ALMTRQRGSKLLPD
Trigger: ATCAGGAAGGAGTTTCGACCCGCGCTGGCGAGTCATGAGCGCCAAGTTTCCCACTGGCGCGCAAACTTGAGTTACTTTTGAGCGTGGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000646607.2
CDS GCA 72 bp CTTCGCCAGTATCCACGCTCAAAAGTAACTCAAGTTTaGGCGCCAGTGGGAAACTTGGCGCTCATGACTCGC +
Preference number: 6 (lower is better)
Translates to: LRQYPRSKVTQV*APVGNLALMTR
Trigger: GCGAGTCATGAGCGCCAAGTTTCCCACTGGCGCGCAAACTTGAGTTACTTTTGAGCGTGGATACTGGCGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626030.1
ENST00000646607.2
CDS CAA 90 bp AACACAAGGCAGGACACAACCGTGTTGATGTATTTGAAAGTCTCCTaGATCTCGATGGGTCCTTGGCACGGGGGAGGGGAGATGGTGCGT +
Preference number: 6 (lower is better)
Translates to: NTRQDTTVLMYLKVS*ISMGPWHGGGEMVR
Trigger: ACGCACCATCTCCCCTCCCCCGTGCCAAGGACCCATCGAGATCAAGGAGACTTTCAAATACATCAACACGGTTGTGTCCTGCCTTGTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000626030.1
ENST00000643890.1
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS CCA 72 bp GGAAACCCGCAGAGACTTCTCAAGTCAGCAGGAACTTaGAAACCGCTGTTCCCTCCAAACGGCTTCAAACAC +
Preference number: 6 (lower is better)
Translates to: GNPQRLLKSAGT*KPLFPPNGFKH
Trigger: GTGTTTGAAGCCGTTTGGAGGGAACAGCGGTTTCCAAGTTCCTGCTGACTTGAGAAGTCTCTGCGGGTTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000475537.2
ENST00000646605.1
CDS CAA 72 bp TCTTCGCCAGTATCCACGCTCAAAAGTAACTCAAGTTaGCGCGCCAGTGGGAAACTTGGCGCTCATGACTCG +
Preference number: 6 (lower is better)
Translates to: SSPVSTLKSNSS*RASGKLGAHDS
Trigger: CGAGTCATGAGCGCCAAGTTTCCCACTGGCGCGCAAACTTGAGTTACTTTTGAGCGTGGATACTGGCGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000626030.1
ENST00000646607.2
CDS CAA 90 bp CTGACGAAACGCTGCGAGAATGCCAGACAGTGTAGCCTCCACCGTTaGCTCGGGGTCTCTGCTGCCATCAGACAAGTACTTTTATTCATT +
Preference number: 6 (lower is better)
Translates to: LTKRCENARQCSLHR*LGVSAAIRQVLLFI
Trigger: AATGAATAAAAGTACTTGTCTGATGGCAGCAGAGACCCCGAGCAAACGGTGGAGGCTACACTGTCTGGCATTCTCGCAGCGTTTCGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377211.8
CDS CAA 90 bp TTCCCGATGATCCCCAGCACGAACACAAGGCAGGACACAACCGTGTaGATGTATTTGAAAGTCTCCTTGATCTCGATGGGTCCTTGGCAC +
Preference number: 6 (lower is better)
Translates to: FPMIPSTNTRQDTTV*MYLKVSLISMGPWH
Trigger: GTGCCAAGGACCCATCGAGATCAAGGAGACTTTCAAATACATCAACACGGTTGTGTCCTGCCTTGTGTTCGTGCTGGGGATCATCGGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000626030.1
ENST00000643890.1
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS CCA 72 bp AGAGGGCAAAGACAAGGACCAGGCAAAAGACGGTTTTaGCCACTTCCCGTCTCTGCTTTAGGTGATCATTTA +
Preference number: 6 (lower is better)
Translates to: RGQRQGPGKRRF*PLPVSALGDHL
Trigger: TAAATGATCACCTAAAGCAGAGACGGGAAGTGGCCAAAACCGTCTTTTGCCTGGTCCTTGTCTTTGCCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000626030.1
ENST00000643890.1
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS CAA 72 bp ACGAACACAAGGCAGGACACAACCGTGTTGATGTATTaGAAAGTCTCCTTGATCTCGATGGGTCCTTGGCAC +
Preference number: 6 (lower is better)
Translates to: TNTRQDTTVLMY*KVSLISMGPWH
Trigger: GTGCCAAGGACCCATCGAGATCAAGGAGACTTTCAAATACATCAACACGGTTGTGTCCTGCCTTGTGTTCGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000626030.1
ENST00000643890.1
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1
CDS CAA 72 bp ATCCCCAGCACGAACACAAGGCAGGACACAACCGTGTaGATGTATTTGAAAGTCTCCTTGATCTCGATGGGT +
Preference number: 6 (lower is better)
Translates to: IPSTNTRQDTTV*MYLKVSLISMG
Trigger: ACCCATCGAGATCAAGGAGACTTTCAAATACATCAACACGGTTGTGTCCTGCCTTGTGTTCGTGCTGGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000377211.8
ENST00000475537.2
ENST00000626030.1
ENST00000643890.1
ENST00000646605.1
ENST00000646607.2
ENST00000646948.1