RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EDNRA (Homo sapiens)

Ensembl gene IDs: ENSG00000151617

Ensembl transcript IDs: ENST00000324300.10, ENST00000358556.8, ENST00000503721.1, ENST00000506066.1, ENST00000510697.5, ENST00000511804.5, ENST00000514245.1, ENST00000648866.1, ENST00000651419.1

Found 506 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CGAGGAGTGCTTCTAAGGGTGGTCAGTTCATGCTGTCCTTATGGCTaGTCCGGTCTGTGTTGTGGTTGTTTTGATCGTGGTTCTTCCACT +
Preference number: 1 (lower is better)
Translates to: RGVLLRVVSSCCPYG*SGLCCGCFDRGSST
Trigger: AGTGGAAGAACCACGATCAAAACAACCACAACACAGACCGGAGCAGCCATAAGGACAGCATGAACTGACCACCCTTAGAAGCACTCCTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510697.5
3UTR CCA 90 bp GGTTGTTTTGATCGTGGTTCTTCCACTGGATGCTTGTTCCGTTCATaGGGACCGAGGTCATCAGACTTTTGGACTGGTAACAGCAGCAGC +
Preference number: 1 (lower is better)
Translates to: GCFDRGSSTGCLFRS*GPRSSDFWTGNSSS
Trigger: GCTGCTGCTGTTACCAGTCCAAAAGTCTGATGACCTCGGTCCCCATGAACGGAACAAGCATCCAGTGGAAGAACCACGATCAAAACAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510697.5
3UTR TCA 90 bp CAATTCTCAAGCTGCCATTCCTTCTGTTCAACATCTCACAAGTCATaGGGGTGTAGAAGATCGCAGTGCACACCAAGGGCATACAGAAAT +
Preference number: 1 (lower is better)
Translates to: QFSSCHSFCSTSHKS*GCRRSQCTPRAYRN
Trigger: ATTTCTGTATGCCCTTGGTGTGCACTGCGATCTTCTACACCCTCATGACTTGTGAGATGTTGAACAGAAGGAATGGCAGCTTGAGAATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510697.5
3UTR TCA 90 bp TGGTGTGAACCTATGGCTTATATTATAGGCATATATCACTGCATATaGTGCGCCAGTGGAATAATAGATTTGACTGCTAACACACAAAAG +
Preference number: 1 (lower is better)
Translates to: WCEPMAYIIGIYHCI*CASGIIDLTANTQK
Trigger: CTTTTGTGTGTTAGCAGTCAAATCTATTATTCCACTGGCGCATCATATGCAGTGATATATGCCTATAATATAAGCCATAGGTTCACACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
3UTR CCA 90 bp ATGATTACAAGATTTATGAATGCAGAAGGTTGCTACAGGTTAAAATaGACTGAGGCAGGTTGTCATGATGAACAATCACCTAGATTTTAC +
Preference number: 1 (lower is better)
Translates to: MITRFMNAEGCYRLK*TEAGCHDEQSPRFY
Trigger: GTAAAATCTAGGTGATTGTTCATCATGACAACCTGCCTCAGTCCATTTTAACCTGTAGCAACCTTCTGCATTCATAAATCTTGTAATCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
3UTR GCA 90 bp ATTTGTAATGGTAACATGATTACAAGATTTATGAATGCAGAAGGTTaGTACAGGTTAAAATGGACTGAGGCAGGTTGTCATGATGAACAA +
Preference number: 1 (lower is better)
Translates to: ICNGNMITRFMNAEG*YRLKWTEAGCHDEQ
Trigger: TTGTTCATCATGACAACCTGCCTCAGTCCATTTTAACCTGTAGCAACCTTCTGCATTCATAAATCTTGTAATCATGTTACCATTACAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
3UTR-3UTR CCA 90 bp CGAGGAGTGCTTCTAAGGGTGGTCAGTTCATGCTGTCCTTATGGCTGCTCCGGTTCTCCGAGAGGATTATaGGAGTACCGAGGAGTGCTT +
Preference number: 2 (lower is better)
Translates to: RGVLLRVVSSCCPYGCSGSPRGL*EYRGVL
Trigger: AAGCACTCCTCGGTACTCCCATAATCCTCTCGGAGA...ACCGGAGCAGCCATAAGGACAGCATGAACTGACCACCCTTAGAAGCACTCCTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510697.5
3UTR-3UTR CCA 90 bp TGGGAGTACCGAGGAGTGCTTCTAAGGGTGGTCAGTTCATGCTGTCCTTATGGCTGCTTGTTCCGTTCATaGGGACCGAGGTCATCAGAC +
Preference number: 2 (lower is better)
Translates to: WEYRGVLLRVVSSCCPYGCLFRS*GPRSSD
Trigger: GTCTGATGACCTCGGTCCCCATGAACGGAACAAGCA...GCCATAAGGACAGCATGAACTGACCACCCTTAGAAGCACTCCTCGGTACTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510697.5
3UTR-3UTR GCA 90 bp CGAGGAGTGCTTCTAAGGGTGGTCAGTTCATGCTGTCCTTATGGCTGCTCCGGTTGTAGAAGATCGCAGTaGACACCAAGGGCATACAGA +
Preference number: 2 (lower is better)
Translates to: RGVLLRVVSSCCPYGCSGCRRSQ*TPRAYR
Trigger: TCTGTATGCCCTTGGTGTGCACTGCGATCTTCTACA...ACCGGAGCAGCCATAAGGACAGCATGAACTGACCACCCTTAGAAGCACTCCTCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510697.5
3UTR-3UTR GCA 90 bp AGTGCTTCTAAGGGTGGTCAGTTCATGCTGTCCTTATGGCTGCTCCGGTCTGTGGGTTCTTCCACTGGATaGTTGTTCCGTTCATGGGGA +
Preference number: 2 (lower is better)
Translates to: SASKGGQFMLSLWLLRSVGSSTG*LFRSWG
Trigger: TCCCCATGAACGGAACAAGCATCCAGTGGAAGAACC...CACAGACCGGAGCAGCCATAAGGACAGCATGAACTGACCACCCTTAGAAGCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510697.5
3UTR-3UTR TCA 90 bp CCGAGAGGATTATGGGAGTACCGAGGAGTGCTTCTAAGGGTGGTCAGTTCATGCGTGTTGTGGTTGTTTTaGTCGTGGTTCTTCCACTGG +
Preference number: 2 (lower is better)
Translates to: PRGLWEYRGVLLRVVSSCVLWLF*SWFFHW
Trigger: CCAGTGGAAGAACCACGATCAAAACAACCACAACAC...GCATGAACTGACCACCCTTAGAAGCACTCCTCGGTACTCCCATAATCCTCTCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510697.5
3UTR-3UTR CCA 90 bp CCGAGAGGATTATGGGAGTACCGAGGAGTGCTTCTAAGGGTGGTCAGTTCATGCTCGTGGTTCTTCCACTaGATGCTTGTTCCGTTCATG +
Preference number: 2 (lower is better)
Translates to: PRGLWEYRGVLLRVVSSCSWFFH*MLVPFM
Trigger: CATGAACGGAACAAGCATCCAGTGGAAGAACCACGA...GCATGAACTGACCACCCTTAGAAGCACTCCTCGGTACTCCCATAATCCTCTCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510697.5
3UTR-3UTR TCA 90 bp TTATGGGCCACTGCCAACTCAGGGCCTTGGCTTCTGGCTCATTTCTACAAAGTTGTGACCAGTTCCCATTaGACATTCACCAGAACTGCC +
Preference number: 2 (lower is better)
Translates to: LWATANSGPWLLAHFYKVVTSSH*TFTRTA
Trigger: GGCAGTTCTGGTGAATGTTCAATGGGAACTGGTCAC...AACTTTGTAGAAATGAGCCAGAAGCCAAGGCCCTGAGTTGGCAGTGGCCCATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
3UTR-3UTR TCA 90 bp TTATGGGCCACTGCCAACTCAGGGCCTTGGCTTCTGGCTCATTTCTACAAAGTTTCACTGTGGGCCCTTTaGAATGGTGACAATGTGGGA +
Preference number: 2 (lower is better)
Translates to: LWATANSGPWLLAHFYKVSLWAL*NGDNVG
Trigger: TCCCACATTGTCACCATTTCAAAGGGCCCACAGTGA...AACTTTGTAGAAATGAGCCAGAAGCCAAGGCCCTGAGTTGGCAGTGGCCCATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
3UTR-3UTR TCA 90 bp CGAGGAGTGCTTCTAAGGGTGGTCAGTTCATGCTGTCCTTATGGCTGCTCCGGTGCAGCAGCAGAGGCATaGCTGGAAACAATTTTTAAA +
Preference number: 2 (lower is better)
Translates to: RGVLLRVVSSCCPYGCSGAAAEA*LETIFK
Trigger: TTTAAAAATTGTTTCCAGTCATGCCTCTGCTGCTGC...ACCGGAGCAGCCATAAGGACAGCATGAACTGACCACCCTTAGAAGCACTCCTCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510697.5
3UTR-3UTR GCA 90 bp GTGGTTCTTCCACTGGATGCTTGTTCCGTTCATGGGGACCGAGGTCATCAGACTGCAGAAAACTGTTTTTaGCACTTCTCGACGCTGCTT +
Preference number: 2 (lower is better)
Translates to: VVLPLDACSVHGDRGHQTAENCF*HFSTLL
Trigger: AAGCAGCGTCGAGAAGTGGCAAAAACAGTTTTCTGC...AGTCTGATGACCTCGGTCCCCATGAACGGAACAAGCATCCAGTGGAAGAACCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000510697.5
3UTR-3UTR CCA 90 bp TTATGGGCCACTGCCAACTCAGGGCCTTGGCTTCTGGCTCATTTCTACAAAGTTGAAATGGTGACAATGTaGGAGGGAGATGTTGGGGTG +
Preference number: 2 (lower is better)
Translates to: LWATANSGPWLLAHFYKVEMVTM*EGDVGV
Trigger: CACCCCAACATCTCCCTCCCACATTGTCACCATTTC...AACTTTGTAGAAATGAGCCAGAAGCCAAGGCCCTGAGTTGGCAGTGGCCCATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
3UTR-3UTR CCA 90 bp ACATCTGGGAAAATGCCCAGCAAAAGTCACTGTGGGCCCTTTGAAATGGTGACATCTCCGAGAGGATTATaGGAGTACCGAGGAGTGCTT +
Preference number: 2 (lower is better)
Translates to: TSGKMPSKSHCGPFEMVTSPRGL*EYRGVL
Trigger: AAGCACTCCTCGGTACTCCCATAATCCTCTCGGAGA...TGTCACCATTTCAAAGGGCCCACAGTGACTTTTGCTGGGCATTTTCCCAGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
3UTR-3UTR CCA 90 bp ACATCTGGGAAAATGCCCAGCAAAAGTCACTGTGGGCCCTTTGAAATGGTGACAAGGGAGATGTTGGGGTaGGGAGTTAGGTTCATACTG +
Preference number: 2 (lower is better)
Translates to: TSGKMPSKSHCGPFEMVTREMLG*GVRFIL
Trigger: CAGTATGAACCTAACTCCCCACCCCAACATCTCCCT...TGTCACCATTTCAAAGGGCCCACAGTGACTTTTGCTGGGCATTTTCCCAGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
3UTR-3UTR CCA 90 bp AGTACGATTCGTAGATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTTTGTCTCCGAGAGGATTATaGGAGTACCGAGGAGTGCTT +
Preference number: 2 (lower is better)
Translates to: STIRRCCGWINQSTLAVLSPRGL*EYRGVL
Trigger: AAGCACTCCTCGGTACTCCCATAATCCTCTCGGAGA...CAAAACCGCAAGGGTAGACTGGTTTATCCACCCACAACATCTACGAATCGTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000511804.5
ENST00000648866.1
ENST00000651419.1
3UTR-3UTR CCA 90 bp AGAAGTACGATTCGTAGATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTTCTCCGAGAGGATTATaGGAGTACCGAGGAGTGCTT +
Preference number: 2 (lower is better)
Translates to: RSTIRRCCGWINQSTLAVSPRGL*EYRGVL
Trigger: AAGCACTCCTCGGTACTCCCATAATCCTCTCGGAGA...AACCGCAAGGGTAGACTGGTTTATCCACCCACAACATCTACGAATCGTACTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000511804.5
ENST00000648866.1
ENST00000651419.1
3UTR-3UTR CCA 90 bp CTGTACTCACAGTCTGTAAACATCTGGGAAAATGCCCAGCAAAAGTCACTGTGGGAAATGGTGACAATGTaGGAGGGAGATGTTGGGGTG +
Preference number: 2 (lower is better)
Translates to: LYSQSVNIWENAQQKSLWEMVTM*EGDVGV
Trigger: CACCCCAACATCTCCCTCCCACATTGTCACCATTTC...CCACAGTGACTTTTGCTGGGCATTTTCCCAGATGTTTACAGACTGTGAGTACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
3UTR-3UTR TCA 90 bp TTATGGGCCACTGCCAACTCAGGGCCTTGGCTTCTGGCTCATTTCTACAAAGTTGAGTTAGGTTCATACTaGAAACCCCAAGAAGTGAAG +
Preference number: 2 (lower is better)
Translates to: LWATANSGPWLLAHFYKVELGSY*KPQEVK
Trigger: CTTCACTTCTTGGGGTTTTCAGTATGAACCTAACTC...AACTTTGTAGAAATGAGCCAGAAGCCAAGGCCCTGAGTTGGCAGTGGCCCATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
3UTR-3UTR TCA 90 bp TATATTGCTAGTCCACAGCTCATCTGCTTTCACGCTGCCTCTTATATCCCATTTGGCCCTTTGAAATGGTaGCAATGTGGGAGGGAGATG +
Preference number: 2 (lower is better)
Translates to: YIASPQLICFHAASYIPFGPLKW*QCGREM
Trigger: CATCTCCCTCCCACATTGTCACCATTTCAAAGGGCC...AAATGGGATATAAGAGGCAGCGTGAAAGCAGATGAGCTGTGGACTAGCAATATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
3UTR-3UTR TCA 90 bp AATCACCTAGATTTTACTCAGACTATGCACTTTGGCACAACTGCGGGGCACAATTCACTGTGGGCCCTTTaGAATGGTGACAATGTGGGA +
Preference number: 2 (lower is better)
Translates to: NHLDFTQTMHFGTTAGHNSLWAL*NGDNVG
Trigger: TCCCACATTGTCACCATTTCAAAGGGCCCACAGTGA...ATTGTGCCCCGCAGTTGTGCCAAAGTGCATAGTCTGAGTAAAATCTAGGTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
3UTR-3UTR TCA 90 bp AGTGCTTCTAAGGGTGGTCAGTTCATGCTGTCCTTATGGCTGCTCCGGTCTGTGTATGGGGTTTATACATaGATTCATGGTTGCCAAGTT +
Preference number: 2 (lower is better)
Translates to: SASKGGQFMLSLWLLRSVYGVYT*IHGCQV
Trigger: AACTTGGCAACCATGAATTCATGTATAAACCCCATA...CACAGACCGGAGCAGCCATAAGGACAGCATGAACTGACCACCCTTAGAAGCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510697.5
3UTR-3UTR GCA 90 bp TTATTTTACACTTATGGGCCACTGCCAACTCAGGGCCTTGGCTTCTGGCTCATTGCACTTTGGCACAACTaGGGGGCACAATTATTAGAT +
Preference number: 2 (lower is better)
Translates to: LFYTYGPLPTQGLGFWLIALWHN*GAQLLD
Trigger: ATCTAATAATTGTGCCCCGCAGTTGTGCCAAAGTGC...AATGAGCCAGAAGCCAAGGCCCTGAGTTGGCAGTGGCCCATAAGTGTAAAATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
3UTR-3UTR TCA 90 bp TTATGGGCCACTGCCAACTCAGGGCCTTGGCTTCTGGCTCATTTCTACAAAGTTCAAATAAAAGTGACTTaGGCCCATATTGTGTTTGGC +
Preference number: 2 (lower is better)
Translates to: LWATANSGPWLLAHFYKVQIKVT*AHIVFG
Trigger: GCCAAACACAATATGGGCTCAAGTCACTTTTATTTG...AACTTTGTAGAAATGAGCCAGAAGCCAAGGCCCTGAGTTGGCAGTGGCCCATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
3UTR-3UTR TCA 90 bp TTATTTTACACTTATGGGCCACTGCCAACTCAGGGCCTTGGCTTCTGGCTCATTCTATATACAGTGCACTaGAAGTCTCAGGCAGAGTTA +
Preference number: 2 (lower is better)
Translates to: LFYTYGPLPTQGLGFWLILYTVH*KSQAEL
Trigger: TAACTCTGCCTGAGACTTTCAGTGCACTGTATATAG...AATGAGCCAGAAGCCAAGGCCCTGAGTTGGCAGTGGCCCATAAGTGTAAAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
3UTR-3UTR GCA 90 bp TTATTTTACACTTATGGGCCACTGCCAACTCAGGGCCTTGGCTTCTGGCTCATTAAACCAGTCTACCCTTaGGGTTTTGGAAAGCATTTC +
Preference number: 2 (lower is better)
Translates to: LFYTYGPLPTQGLGFWLIKPVYP*GFGKHF
Trigger: GAAATGCTTTCCAAAACCGCAAGGGTAGACTGGTTT...AATGAGCCAGAAGCCAAGGCCCTGAGTTGGCAGTGGCCCATAAGTGTAAAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
3UTR-3UTR CCA 90 bp TATATTGCTAGTCCACAGCTCATCTGCTTTCACGCTGCCTCTTATATCCCATTTAGGGAGATGTTGGGGTaGGGAGTTAGGTTCATACTG +
Preference number: 2 (lower is better)
Translates to: YIASPQLICFHAASYIPFREMLG*GVRFIL
Trigger: CAGTATGAACCTAACTCCCCACCCCAACATCTCCCT...AAATGGGATATAAGAGGCAGCGTGAAAGCAGATGAGCTGTGGACTAGCAATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
3UTR-3UTR CCA 90 bp CCTAGATTTTACTCAGACTATGCACTTTGGCACAACTGCGGGGCACAATTATTAGAAATGGTGACAATGTaGGAGGGAGATGTTGGGGTG +
Preference number: 2 (lower is better)
Translates to: PRFYSDYALWHNCGAQLLEMVTM*EGDVGV
Trigger: CACCCCAACATCTCCCTCCCACATTGTCACCATTTC...TAATAATTGTGCCCCGCAGTTGTGCCAAAGTGCATAGTCTGAGTAAAATCTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
3UTR-3UTR CCA 90 bp TATATTGCTAGTCCACAGCTCATCTGCTTTCACGCTGCCTCTTATATCCCATTTGAAATGGTGACAATGTaGGAGGGAGATGTTGGGGTG +
Preference number: 2 (lower is better)
Translates to: YIASPQLICFHAASYIPFEMVTM*EGDVGV
Trigger: CACCCCAACATCTCCCTCCCACATTGTCACCATTTC...AAATGGGATATAAGAGGCAGCGTGAAAGCAGATGAGCTGTGGACTAGCAATATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
3UTR-3UTR CCA 90 bp TTATTTTACACTTATGGGCCACTGCCAACTCAGGGCCTTGGCTTCTGGCTCATTTGCTACAGGTTAAAATaGACTGAGGCAGGTTGTCAT +
Preference number: 2 (lower is better)
Translates to: LFYTYGPLPTQGLGFWLICYRLK*TEAGCH
Trigger: ATGACAACCTGCCTCAGTCCATTTTAACCTGTAGCA...AATGAGCCAGAAGCCAAGGCCCTGAGTTGGCAGTGGCCCATAAGTGTAAAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
3UTR-3UTR TCA 90 bp TTATGGGCCACTGCCAACTCAGGGCCTTGGCTTCTGGCTCATTTCTACAAAGTTATATATCACTGCATATaGTGCGCCAGTGGAATAATA +
Preference number: 2 (lower is better)
Translates to: LWATANSGPWLLAHFYKVIYHCI*CASGII
Trigger: TATTATTCCACTGGCGCATCATATGCAGTGATATAT...AACTTTGTAGAAATGAGCCAGAAGCCAAGGCCCTGAGTTGGCAGTGGCCCATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
3UTR-3UTR GCA 90 bp CTGCTGTACTCACAGTCTGTAAACATCTGGGAAAATGCCCAGCAAAAGTCACTGAAACCAGTCTACCCTTaGGGTTTTGGAAAGCATTTC +
Preference number: 2 (lower is better)
Translates to: LLYSQSVNIWENAQQKSLKPVYP*GFGKHF
Trigger: GAAATGCTTTCCAAAACCGCAAGGGTAGACTGGTTT...CAGTGACTTTTGCTGGGCATTTTCCCAGATGTTTACAGACTGTGAGTACAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
3UTR-3UTR TCA 90 bp AATCACCTAGATTTTACTCAGACTATGCACTTTGGCACAACTGCGGGGCACAATGAGTTAGGTTCATACTaGAAACCCCAAGAAGTGAAG +
Preference number: 2 (lower is better)
Translates to: NHLDFTQTMHFGTTAGHNELGSY*KPQEVK
Trigger: CTTCACTTCTTGGGGTTTTCAGTATGAACCTAACTC...ATTGTGCCCCGCAGTTGTGCCAAAGTGCATAGTCTGAGTAAAATCTAGGTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
3UTR-3UTR TCA 90 bp TTGCAATTCAAGCAACTGGAACCTGATGTTATTTTACCTGTCCTAAAATATGGCGGCCCTTTGAAATGGTaGCAATGTGGGAGGGAGATG +
Preference number: 2 (lower is better)
Translates to: LQFKQLEPDVILPVLKYGGPLKW*QCGREM
Trigger: CATCTCCCTCCCACATTGTCACCATTTCAAAGGGCC...GCCATATTTTAGGACAGGTAAAATAACATCAGGTTCCAGTTGCTTGAATTGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
3UTR-3UTR GCA 90 bp TTATTTTACACTTATGGGCCACTGCCAACTCAGGGCCTTGGCTTCTGGCTCATTTATGACCCCAAATACTaGTTTATCAAACCAACCAAC +
Preference number: 2 (lower is better)
Translates to: LFYTYGPLPTQGLGFWLIYDPKY*FIKPTN
Trigger: GTTGGTTGGTTTGATAAAGCAGTATTTGGGGTCATA...AATGAGCCAGAAGCCAAGGCCCTGAGTTGGCAGTGGCCCATAAGTGTAAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
3UTR-3UTR CCA 90 bp TTATGGGCCACTGCCAACTCAGGGCCTTGGCTTCTGGCTCATTTCTACAAAGTTAATCGTAAGTTCTGGTaGCATTTGTGGGTAATTATT +
Preference number: 2 (lower is better)
Translates to: LWATANSGPWLLAHFYKVNRKFW*HLWVII
Trigger: AATAATTACCCACAAATGCCACCAGAACTTACGATT...AACTTTGTAGAAATGAGCCAGAAGCCAAGGCCCTGAGTTGGCAGTGGCCCATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
3UTR-3UTR CCA 90 bp CACAGGAAACAATATGACCCCAAATACTGCTTTATCAAACCAACCAACCAAACAAGGGAGATGTTGGGGTaGGGAGTTAGGTTCATACTG +
Preference number: 2 (lower is better)
Translates to: HRKQYDPKYCFIKPTNQTREMLG*GVRFIL
Trigger: CAGTATGAACCTAACTCCCCACCCCAACATCTCCCT...TGTTTGGTTGGTTGGTTTGATAAAGCAGTATTTGGGGTCATATTGTTTCCTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
3UTR-3UTR TCA 90 bp ATTACAAGATTTATGAATGCAGAAGGTTGCTACAGGTTAAAATGGACTGAGGCAGTGACCAGTTCCCATTaGACATTCACCAGAACTGCC +
Preference number: 2 (lower is better)
Translates to: ITRFMNAEGCYRLKWTEAVTSSH*TFTRTA
Trigger: GGCAGTTCTGGTGAATGTTCAATGGGAACTGGTCAC...TGCCTCAGTCCATTTTAACCTGTAGCAACCTTCTGCATTCATAAATCTTGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
3UTR-3UTR TCA 90 bp TTGCAATTCAAGCAACTGGAACCTGATGTTATTTTACCTGTCCTAAAATATGGCGTGACCAGTTCCCATTaGACATTCACCAGAACTGCC +
Preference number: 2 (lower is better)
Translates to: LQFKQLEPDVILPVLKYGVTSSH*TFTRTA
Trigger: GGCAGTTCTGGTGAATGTTCAATGGGAACTGGTCAC...GCCATATTTTAGGACAGGTAAAATAACATCAGGTTCCAGTTGCTTGAATTGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
3UTR-3UTR TCA 90 bp TATATTGCTAGTCCACAGCTCATCTGCTTTCACGCTGCCTCTTATATCCCATTTGAGTTAGGTTCATACTaGAAACCCCAAGAAGTGAAG +
Preference number: 2 (lower is better)
Translates to: YIASPQLICFHAASYIPFELGSY*KPQEVK
Trigger: CTTCACTTCTTGGGGTTTTCAGTATGAACCTAACTC...AAATGGGATATAAGAGGCAGCGTGAAAGCAGATGAGCTGTGGACTAGCAATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
3UTR-3UTR GCA 90 bp CACAGGAAACAATATGACCCCAAATACTGCTTTATCAAACCAACCAACCAAACAAGTCCACAGCTCATCTaGTTTCACGCTGCCTCTTAT +
Preference number: 2 (lower is better)
Translates to: HRKQYDPKYCFIKPTNQTSPQLI*FHAASY
Trigger: ATAAGAGGCAGCGTGAAAGCAGATGAGCTGTGGACT...TGTTTGGTTGGTTGGTTTGATAAAGCAGTATTTGGGGTCATATTGTTTCCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
3UTR-3UTR CCA 90 bp TTGCAATTCAAGCAACTGGAACCTGATGTTATTTTACCTGTCCTAAAATATGGCTCTCCGAGAGGATTATaGGAGTACCGAGGAGTGCTT +
Preference number: 2 (lower is better)
Translates to: LQFKQLEPDVILPVLKYGSPRGL*EYRGVL
Trigger: AAGCACTCCTCGGTACTCCCATAATCCTCTCGGAGA...GCCATATTTTAGGACAGGTAAAATAACATCAGGTTCCAGTTGCTTGAATTGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
3UTR-3UTR CCA 90 bp ACATCTGGGAAAATGCCCAGCAAAAGTCACTGTGGGCCCTTTGAAATGGTGACAAATCGTAAGTTCTGGTaGCATTTGTGGGTAATTATT +
Preference number: 2 (lower is better)
Translates to: TSGKMPSKSHCGPFEMVTNRKFW*HLWVII
Trigger: AATAATTACCCACAAATGCCACCAGAACTTACGATT...TGTCACCATTTCAAAGGGCCCACAGTGACTTTTGCTGGGCATTTTCCCAGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
3UTR-3UTR CCA 90 bp ATTACAAGATTTATGAATGCAGAAGGTTGCTACAGGTTAAAATGGACTGAGGCATCAGACTATGCACTTTaGCACAACTGCGGGGCACAA +
Preference number: 2 (lower is better)
Translates to: ITRFMNAEGCYRLKWTEASDYAL*HNCGAQ
Trigger: TTGTGCCCCGCAGTTGTGCCAAAGTGCATAGTCTGA...TGCCTCAGTCCATTTTAACCTGTAGCAACCTTCTGCATTCATAAATCTTGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
3UTR-3UTR CCA 90 bp TTATTTTACACTTATGGGCCACTGCCAACTCAGGGCCTTGGCTTCTGGCTCATTACCTGTCCTAAAATATaGCCCAACAAATTATCTTAC +
Preference number: 2 (lower is better)
Translates to: LFYTYGPLPTQGLGFWLITCPKI*PNKLSY
Trigger: GTAAGATAATTTGTTGGGCCATATTTTAGGACAGGT...AATGAGCCAGAAGCCAAGGCCCTGAGTTGGCAGTGGCCCATAAGTGTAAAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
3UTR-3UTR GCA 90 bp CACAGGAAACAATATGACCCCAAATACTGCTTTATCAAACCAACCAACCAAACAGCACTTTGGCACAACTaGGGGGCACAATTATTAGAT +
Preference number: 2 (lower is better)
Translates to: HRKQYDPKYCFIKPTNQTALWHN*GAQLLD
Trigger: ATCTAATAATTGTGCCCCGCAGTTGTGCCAAAGTGC...TGTTTGGTTGGTTGGTTTGATAAAGCAGTATTTGGGGTCATATTGTTTCCTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
3UTR-3UTR TCA 90 bp TTGCAATTCAAGCAACTGGAACCTGATGTTATTTTACCTGTCCTAAAATATGGCCTGTCTGGCGAAGTCTaGAAGAAATATCAGACAACC +
Preference number: 2 (lower is better)
Translates to: LQFKQLEPDVILPVLKYGLSGEV*KKYQTT
Trigger: GGTTGTCTGATATTTCTTTCAGACTTCGCCAGACAG...GCCATATTTTAGGACAGGTAAAATAACATCAGGTTCCAGTTGCTTGAATTGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
3UTR-3UTR GCA 90 bp CACAGGAAACAATATGACCCCAAATACTGCTTTATCAAACCAACCAACCAAACAGACTTCTATATACAGTaGACTGAAAGTCTCAGGCAG +
Preference number: 2 (lower is better)
Translates to: HRKQYDPKYCFIKPTNQTDFYIQ*TESLRQ
Trigger: CTGCCTGAGACTTTCAGTGCACTGTATATAGAAGTC...TGTTTGGTTGGTTGGTTTGATAAAGCAGTATTTGGGGTCATATTGTTTCCTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
3UTR-3UTR CCA 90 bp AATCACCTAGATTTTACTCAGACTATGCACTTTGGCACAACTGCGGGGCACAATAATCGTAAGTTCTGGTaGCATTTGTGGGTAATTATT +
Preference number: 2 (lower is better)
Translates to: NHLDFTQTMHFGTTAGHNNRKFW*HLWVII
Trigger: AATAATTACCCACAAATGCCACCAGAACTTACGATT...ATTGTGCCCCGCAGTTGTGCCAAAGTGCATAGTCTGAGTAAAATCTAGGTGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
3UTR-3UTR CCA 90 bp TATATTGCTAGTCCACAGCTCATCTGCTTTCACGCTGCCTCTTATATCCCATTTAAGAATCGTAAGTTCTaGTGGCATTTGTGGGTAATT +
Preference number: 2 (lower is better)
Translates to: YIASPQLICFHAASYIPFKNRKF*WHLWVI
Trigger: AATTACCCACAAATGCCACCAGAACTTACGATTCTT...AAATGGGATATAAGAGGCAGCGTGAAAGCAGATGAGCTGTGGACTAGCAATATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
3UTR-3UTR TCA 90 bp TTGCAATTCAAGCAACTGGAACCTGATGTTATTTTACCTGTCCTAAAATATGGCCTATATACAGTGCACTaGAAGTCTCAGGCAGAGTTA +
Preference number: 2 (lower is better)
Translates to: LQFKQLEPDVILPVLKYGLYTVH*KSQAEL
Trigger: TAACTCTGCCTGAGACTTTCAGTGCACTGTATATAG...GCCATATTTTAGGACAGGTAAAATAACATCAGGTTCCAGTTGCTTGAATTGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
3UTR-3UTR TCA 90 bp ATTACAAGATTTATGAATGCAGAAGGTTGCTACAGGTTAAAATGGACTGAGGCAGAAAACCCCAAGAAGTaGAGAATCGTAAGTTCTGGT +
Preference number: 2 (lower is better)
Translates to: ITRFMNAEGCYRLKWTEAENPKK*RIVSSG
Trigger: ACCAGAACTTACGATTCTTCACTTCTTGGGGTTTTC...TGCCTCAGTCCATTTTAACCTGTAGCAACCTTCTGCATTCATAAATCTTGTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
3UTR-3UTR TCA 90 bp TTGCAATTCAAGCAACTGGAACCTGATGTTATTTTACCTGTCCTAAAATATGGCGAAAACCCCAAGAAGTaGAGAATCGTAAGTTCTGGT +
Preference number: 2 (lower is better)
Translates to: LQFKQLEPDVILPVLKYGENPKK*RIVSSG
Trigger: ACCAGAACTTACGATTCTTCACTTCTTGGGGTTTTC...GCCATATTTTAGGACAGGTAAAATAACATCAGGTTCCAGTTGCTTGAATTGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
3UTR-3UTR GCA 90 bp TTGCAATTCAAGCAACTGGAACCTGATGTTATTTTACCTGTCCTAAAATATGGCAAACCAGTCTACCCTTaGGGTTTTGGAAAGCATTTC +
Preference number: 2 (lower is better)
Translates to: LQFKQLEPDVILPVLKYGKPVYP*GFGKHF
Trigger: GAAATGCTTTCCAAAACCGCAAGGGTAGACTGGTTT...GCCATATTTTAGGACAGGTAAAATAACATCAGGTTCCAGTTGCTTGAATTGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
3UTR-3UTR GCA 90 bp TTGCAATTCAAGCAACTGGAACCTGATGTTATTTTACCTGTCCTAAAATATGGCGACTTCTATATACAGTaGACTGAAAGTCTCAGGCAG +
Preference number: 2 (lower is better)
Translates to: LQFKQLEPDVILPVLKYGDFYIQ*TESLRQ
Trigger: CTGCCTGAGACTTTCAGTGCACTGTATATAGAAGTC...GCCATATTTTAGGACAGGTAAAATAACATCAGGTTCCAGTTGCTTGAATTGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
3UTR-3UTR TCA 90 bp TTGCAATTCAAGCAACTGGAACCTGATGTTATTTTACCTGTCCTAAAATATGGCTCTAAAGTTTCATGGTaGCCAGTTCCCATTGAACAT +
Preference number: 2 (lower is better)
Translates to: LQFKQLEPDVILPVLKYGSKVSW*PVPIEH
Trigger: ATGTTCAATGGGAACTGGTCACCATGAAACTTTAGA...GCCATATTTTAGGACAGGTAAAATAACATCAGGTTCCAGTTGCTTGAATTGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
3UTR-3UTR TCA 90 bp ATTACAAGATTTATGAATGCAGAAGGTTGCTACAGGTTAAAATGGACTGAGGCATCTAAAGTTTCATGGTaGCCAGTTCCCATTGAACAT +
Preference number: 2 (lower is better)
Translates to: ITRFMNAEGCYRLKWTEASKVSW*PVPIEH
Trigger: ATGTTCAATGGGAACTGGTCACCATGAAACTTTAGA...TGCCTCAGTCCATTTTAACCTGTAGCAACCTTCTGCATTCATAAATCTTGTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
3UTR-3UTR TCA 90 bp GGTAACATGATTACAAGATTTATGAATGCAGAAGGTTGCTACAGGTTAAAATGGCTATATACAGTGCACTaGAAGTCTCAGGCAGAGTTA +
Preference number: 2 (lower is better)
Translates to: GNMITRFMNAEGCYRLKWLYTVH*KSQAEL
Trigger: TAACTCTGCCTGAGACTTTCAGTGCACTGTATATAG...CCATTTTAACCTGTAGCAACCTTCTGCATTCATAAATCTTGTAATCATGTTACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
3UTR-3UTR CCA 90 bp CACAGGAAACAATATGACCCCAAATACTGCTTTATCAAACCAACCAACCAAACAAAGAATCGTAAGTTCTaGTGGCATTTGTGGGTAATT +
Preference number: 2 (lower is better)
Translates to: HRKQYDPKYCFIKPTNQTKNRKF*WHLWVI
Trigger: AATTACCCACAAATGCCACCAGAACTTACGATTCTT...TGTTTGGTTGGTTGGTTTGATAAAGCAGTATTTGGGGTCATATTGTTTCCTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
3UTR-3UTR TCA 90 bp GGTAACATGATTACAAGATTTATGAATGCAGAAGGTTGCTACAGGTTAAAATGGCAAATAAAAGTGACTTaGGCCCATATTGTGTTTGGC +
Preference number: 2 (lower is better)
Translates to: GNMITRFMNAEGCYRLKWQIKVT*AHIVFG
Trigger: GCCAAACACAATATGGGCTCAAGTCACTTTTATTTG...CCATTTTAACCTGTAGCAACCTTCTGCATTCATAAATCTTGTAATCATGTTACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
3UTR-3UTR GCA 90 bp TTGCAATTCAAGCAACTGGAACCTGATGTTATTTTACCTGTCCTAAAATATGGCATGAATGCAGAAGGTTaGTACAGGTTAAAATGGACT +
Preference number: 2 (lower is better)
Translates to: LQFKQLEPDVILPVLKYGMNAEG*YRLKWT
Trigger: AGTCCATTTTAACCTGTAGCAACCTTCTGCATTCAT...GCCATATTTTAGGACAGGTAAAATAACATCAGGTTCCAGTTGCTTGAATTGCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
3UTR-3UTR GCA 90 bp TTGCAATTCAAGCAACTGGAACCTGATGTTATTTTACCTGTCCTAAAATATGGCTACAAGATTTATGAATaGAGAAGGTTGCTACAGGTT +
Preference number: 2 (lower is better)
Translates to: LQFKQLEPDVILPVLKYGYKIYE*RRLLQV
Trigger: AACCTGTAGCAACCTTCTGCATTCATAAATCTTGTA...GCCATATTTTAGGACAGGTAAAATAACATCAGGTTCCAGTTGCTTGAATTGCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
3UTR-3UTR CCA 90 bp TTGCAATTCAAGCAACTGGAACCTGATGTTATTTTACCTGTCCTAAAATATGGCAAATATCAGACAACCTaGCAATTTCATCACCACATT +
Preference number: 2 (lower is better)
Translates to: LQFKQLEPDVILPVLKYGKYQTT*QFHHHI
Trigger: AATGTGGTGATGAAATTGCCAGGTTGTCTGATATTT...GCCATATTTTAGGACAGGTAAAATAACATCAGGTTCCAGTTGCTTGAATTGCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
3UTR-3UTR CCA 90 bp GGTAACATGATTACAAGATTTATGAATGCAGAAGGTTGCTACAGGTTAAAATGGAATCGTAAGTTCTGGTaGCATTTGTGGGTAATTATT +
Preference number: 2 (lower is better)
Translates to: GNMITRFMNAEGCYRLKWNRKFW*HLWVII
Trigger: AATAATTACCCACAAATGCCACCAGAACTTACGATT...CCATTTTAACCTGTAGCAACCTTCTGCATTCATAAATCTTGTAATCATGTTACC
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
3UTR GCA 72 bp GAGTACCGAGGAGTGCTTCTAAGGGTGGTCAGTTCATaGTGTCCTTATGGCTGCTCCGGTCTGTGTTGTGGT +
Preference number: 3 (lower is better)
Translates to: EYRGVLLRVVSS*CPYGCSGLCCG
Trigger: ACCACAACACAGACCGGAGCAGCCATAAGGACAGCATGAACTGACCACCCTTAGAAGCACTCCTCGGTACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510697.5
3UTR-3UTR CAA 90 bp GTGGTTCTTCCACTGGATGCTTGTTCCGTTCATGGGGACCGAGGTCATCAGACTAGCAGAAAACTGTTTTaGCCACTTCTCGACGCTGCT +
Preference number: 3 (lower is better)
Translates to: VVLPLDACSVHGDRGHQTSRKLF*PLLDAA
Trigger: AGCAGCGTCGAGAAGTGGCAAAAACAGTTTTCTGCT...AGTCTGATGACCTCGGTCCCCATGAACGGAACAAGCATCCAGTGGAAGAACCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000510697.5
3UTR CCA 72 bp GATCGTGGTTCTTCCACTGGATGCTTGTTCCGTTCATaGGGACCGAGGTCATCAGACTTTTGGACTGGTAAC +
Preference number: 3 (lower is better)
Translates to: DRGSSTGCLFRS*GPRSSDFWTGN
Trigger: GTTACCAGTCCAAAAGTCTGATGACCTCGGTCCCCATGAACGGAACAAGCATCCAGTGGAAGAACCACGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510697.5
3UTR TCA 72 bp AGCTGCCATTCCTTCTGTTCAACATCTCACAAGTCATaGGGGTGTAGAAGATCGCAGTGCACACCAAGGGCA +
Preference number: 3 (lower is better)
Translates to: SCHSFCSTSHKS*GCRRSQCTPRA
Trigger: TGCCCTTGGTGTGCACTGCGATCTTCTACACCCTCATGACTTGTGAGATGTTGAACAGAAGGAATGGCAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510697.5
3UTR GCA 72 bp TGTTGTGGTTGTTTTGATCGTGGTTCTTCCACTGGATaGTTGTTCCGTTCATGGGGACCGAGGTCATCAGAC +
Preference number: 3 (lower is better)
Translates to: CCGCFDRGSSTG*LFRSWGPRSSD
Trigger: GTCTGATGACCTCGGTCCCCATGAACGGAACAAGCATCCAGTGGAAGAACCACGATCAAAACAACCACAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510697.5
3UTR GCA 72 bp CTTCTAAGGGTGGTCAGTTCATGCTGTCCTTATGGCTaGTCCGGTCTGTGTTGTGGTTGTTTTGATCGTGGT +
Preference number: 3 (lower is better)
Translates to: LLRVVSSCCPYG*SGLCCGCFDRG
Trigger: ACCACGATCAAAACAACCACAACACAGACCGGAGCAGCCATAAGGACAGCATGAACTGACCACCCTTAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510697.5
3UTR-3UTR CAA 90 bp GAGAGGATTATGGGAGTACCGAGGAGTGCTTCTAAGGGTGGTCAGTTCATGCTGTGTGTTGTGGTTGTTTaGATCGTGGTTCTTCCACTG +
Preference number: 3 (lower is better)
Translates to: ERIMGVPRSASKGGQFMLCVVVV*IVVLPL
Trigger: CAGTGGAAGAACCACGATCAAAACAACCACAACACA...CAGCATGAACTGACCACCCTTAGAAGCACTCCTCGGTACTCCCATAATCCTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510697.5
3UTR-3UTR CAA 90 bp TCCGTTCATGGGGACCGAGGTCATCAGACTTTTGGACTGGTAACAGCAGCAGCAAATTCACATCGGTTCTaGTCCATCTCGTTATACACA +
Preference number: 3 (lower is better)
Translates to: SVHGDRGHQTFGLVTAAANSHRF*SISLYT
Trigger: TGTGTATAACGAGATGGACAAGAACCGATGTGAATT...TGCTGCTGCTGTTACCAGTCCAAAAGTCTGATGACCTCGGTCCCCATGAACGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510697.5
3UTR-3UTR CAA 90 bp TTATTTTACACTTATGGGCCACTGCCAACTCAGGGCCTTGGCTTCTGGCTCATTTCTACCCTTGCGGTTTaGGAAAGCATTTCTTCTTGG +
Preference number: 3 (lower is better)
Translates to: LFYTYGPLPTQGLGFWLISTLAV*ESISSW
Trigger: CCAAGAAGAAATGCTTTCCAAAACCGCAAGGGTAGA...AATGAGCCAGAAGCCAAGGCCCTGAGTTGGCAGTGGCCCATAAGTGTAAAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
3UTR-3UTR CAA 90 bp CACAGGAAACAATATGACCCCAAATACTGCTTTATCAAACCAACCAACCAAACACTCAGACTATGCACTTaGGCACAACTGCGGGGCACA +
Preference number: 3 (lower is better)
Translates to: HRKQYDPKYCFIKPTNQTLRLCT*AQLRGT
Trigger: TGTGCCCCGCAGTTGTGCCAAAGTGCATAGTCTGAG...TGTTTGGTTGGTTGGTTTGATAAAGCAGTATTTGGGGTCATATTGTTTCCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
3UTR-3UTR CAA 90 bp TTATGGGCCACTGCCAACTCAGGGCCTTGGCTTCTGGCTCATTTCTACAAAGTTAAACAAAACCCTATATaGCTAGTCCACAGCTCATCT +
Preference number: 3 (lower is better)
Translates to: LWATANSGPWLLAHFYKVKQNPI*LVHSSS
Trigger: AGATGAGCTGTGGACTAGCAATATAGGGTTTTGTTT...AACTTTGTAGAAATGAGCCAGAAGCCAAGGCCCTGAGTTGGCAGTGGCCCATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
3UTR CCA 72 bp ACTTATGGGCCACTGCCAACTCAGGGCCTTGGCTTCTaGCTCATTTCTACAAAGTTACTTGTTGAAAAGATG +
Preference number: 3 (lower is better)
Translates to: TYGPLPTQGLGF*LISTKLLVEKM
Trigger: CATCTTTTCAACAAGTAACTTTGTAGAAATGAGCCAGAAGCCAAGGCCCTGAGTTGGCAGTGGCCCATAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
3UTR-3UTR CAA 90 bp AATCACCTAGATTTTACTCAGACTATGCACTTTGGCACAACTGCGGGGCACAATTCTACCCTTGCGGTTTaGGAAAGCATTTCTTCTTGG +
Preference number: 3 (lower is better)
Translates to: NHLDFTQTMHFGTTAGHNSTLAV*ESISSW
Trigger: CCAAGAAGAAATGCTTTCCAAAACCGCAAGGGTAGA...ATTGTGCCCCGCAGTTGTGCCAAAGTGCATAGTCTGAGTAAAATCTAGGTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
3UTR-3UTR CAA 90 bp ATTACAAGATTTATGAATGCAGAAGGTTGCTACAGGTTAAAATGGACTGAGGCACTCAGACTATGCACTTaGGCACAACTGCGGGGCACA +
Preference number: 3 (lower is better)
Translates to: ITRFMNAEGCYRLKWTEALRLCT*AQLRGT
Trigger: TGTGCCCCGCAGTTGTGCCAAAGTGCATAGTCTGAG...TGCCTCAGTCCATTTTAACCTGTAGCAACCTTCTGCATTCATAAATCTTGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
3UTR-3UTR CAA 90 bp TTATTTTACACTTATGGGCCACTGCCAACTCAGGGCCTTGGCTTCTGGCTCATTAAACAAAACCCTATATaGCTAGTCCACAGCTCATCT +
Preference number: 3 (lower is better)
Translates to: LFYTYGPLPTQGLGFWLIKQNPI*LVHSSS
Trigger: AGATGAGCTGTGGACTAGCAATATAGGGTTTTGTTT...AATGAGCCAGAAGCCAAGGCCCTGAGTTGGCAGTGGCCCATAAGTGTAAAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
3UTR-3UTR CAA 90 bp CCTAGATTTTACTCAGACTATGCACTTTGGCACAACTGCGGGGCACAATTATTATCTACCCTTGCGGTTTaGGAAAGCATTTCTTCTTGG +
Preference number: 3 (lower is better)
Translates to: PRFYSDYALWHNCGAQLLSTLAV*ESISSW
Trigger: CCAAGAAGAAATGCTTTCCAAAACCGCAAGGGTAGA...TAATAATTGTGCCCCGCAGTTGTGCCAAAGTGCATAGTCTGAGTAAAATCTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
3UTR-3UTR CAA 90 bp CTGCTGTACTCACAGTCTGTAAACATCTGGGAAAATGCCCAGCAAAAGTCACTGAAGCTAGCCATGTACTaGAAAGCTCTATTTTCATGC +
Preference number: 3 (lower is better)
Translates to: LLYSQSVNIWENAQQKSLKLAMY*KALFSC
Trigger: GCATGAAAATAGAGCTTTCAAGTACATGGCTAGCTT...CAGTGACTTTTGCTGGGCATTTTCCCAGATGTTTACAGACTGTGAGTACAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
3UTR-3UTR CAA 90 bp CTGCTGTACTCACAGTCTGTAAACATCTGGGAAAATGCCCAGCAAAAGTCACTGAAGTTCTGGTGGCATTaGTGGGTAATTATTTTTCAC +
Preference number: 3 (lower is better)
Translates to: LLYSQSVNIWENAQQKSLKFWWH*WVIIFH
Trigger: GTGAAAAATAATTACCCACAAATGCCACCAGAACTT...CAGTGACTTTTGCTGGGCATTTTCCCAGATGTTTACAGACTGTGAGTACAGCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
3UTR GCA 72 bp CAAACAAAACCCTATATTGCTAGTCCACAGCTCATCTaGTTTCACGCTGCCTCTTATATCCCATTTGTAATG +
Preference number: 3 (lower is better)
Translates to: QTKPYIASPQLI*FHAASYIPFVM
Trigger: CATTACAAATGGGATATAAGAGGCAGCGTGAAAGCAGATGAGCTGTGGACTAGCAATATAGGGTTTTGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
3UTR-3UTR CAA 90 bp ATTACAAGATTTATGAATGCAGAAGGTTGCTACAGGTTAAAATGGACTGAGGCATCTACCCTTGCGGTTTaGGAAAGCATTTCTTCTTGG +
Preference number: 3 (lower is better)
Translates to: ITRFMNAEGCYRLKWTEASTLAV*ESISSW
Trigger: CCAAGAAGAAATGCTTTCCAAAACCGCAAGGGTAGA...TGCCTCAGTCCATTTTAACCTGTAGCAACCTTCTGCATTCATAAATCTTGTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
3UTR TCA 72 bp GTACTTCTTAGCCTTGCAATTCAAGCAACTGGAACCTaGTGTTATTTTACCTGTCCTAAAATATGGCCCAAC +
Preference number: 3 (lower is better)
Translates to: VLLSLAIQATGT*CYFTCPKIWPN
Trigger: GTTGGGCCATATTTTAGGACAGGTAAAATAACATCAGGTTCCAGTTGCTTGAATTGCAAGGCTAAGAAGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
3UTR CCA 72 bp AGATTTATGAATGCAGAAGGTTGCTACAGGTTAAAATaGACTGAGGCAGGTTGTCATGATGAACAATCACCT +
Preference number: 3 (lower is better)
Translates to: RFMNAEGCYRLK*TEAGCHDEQSP
Trigger: AGGTGATTGTTCATCATGACAACCTGCCTCAGTCCATTTTAACCTGTAGCAACCTTCTGCATTCATAAATCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
3UTR-3UTR CAA 90 bp CACAGGAAACAATATGACCCCAAATACTGCTTTATCAAACCAACCAACCAAACAAAGTTCTGGTGGCATTaGTGGGTAATTATTTTTCAC +
Preference number: 3 (lower is better)
Translates to: HRKQYDPKYCFIKPTNQTKFWWH*WVIIFH
Trigger: GTGAAAAATAATTACCCACAAATGCCACCAGAACTT...TGTTTGGTTGGTTGGTTTGATAAAGCAGTATTTGGGGTCATATTGTTTCCTGTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
3UTR TCA 72 bp CCTATGGCTTATATTATAGGCATATATCACTGCATATaGTGCGCCAGTGGAATAATAGATTTGACTGCTAAC +
Preference number: 3 (lower is better)
Translates to: PMAYIIGIYHCI*CASGIIDLTAN
Trigger: GTTAGCAGTCAAATCTATTATTCCACTGGCGCATCATATGCAGTGATATATGCCTATAATATAAGCCATAGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
3UTR-3UTR CAA 90 bp TTGCAATTCAAGCAACTGGAACCTGATGTTATTTTACCTGTCCTAAAATATGGCAAGTTCTGGTGGCATTaGTGGGTAATTATTTTTCAC +
Preference number: 3 (lower is better)
Translates to: LQFKQLEPDVILPVLKYGKFWWH*WVIIFH
Trigger: GTGAAAAATAATTACCCACAAATGCCACCAGAACTT...GCCATATTTTAGGACAGGTAAAATAACATCAGGTTCCAGTTGCTTGAATTGCAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
3UTR-3UTR CAA 90 bp ATTACAAGATTTATGAATGCAGAAGGTTGCTACAGGTTAAAATGGACTGAGGCAAAGTTCTGGTGGCATTaGTGGGTAATTATTTTTCAC +
Preference number: 3 (lower is better)
Translates to: ITRFMNAEGCYRLKWTEAKFWWH*WVIIFH
Trigger: GTGAAAAATAATTACCCACAAATGCCACCAGAACTT...TGCCTCAGTCCATTTTAACCTGTAGCAACCTTCTGCATTCATAAATCTTGTAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp TTATTTTACACTTATGGGCCACTGCCAACTCAGGGCCTTGGCTTCTGGCTCATTCCGTGGAGCTCGGCGTaGGCAGACAGCTGCCGGGTC +
Preference number: 4 (lower is better)
Translates to: LFYTYGPLPTQGLGFWLIPWSSA*ADSCRV
Trigger: GACCCGGCAGCTGTCTGCGCACGCCGAGCTCCACGG...AATGAGCCAGAAGCCAAGGCCCTGAGTTGGCAGTGGCCCATAAGTGTAAAATAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp ACATCTGGGAAAATGCCCAGCAAAAGTCACTGTGGGCCCTTTGAAATGGTGACACCGTGGAGCTCGGCGTaGGCAGACAGCTGCCGGGTC +
Preference number: 4 (lower is better)
Translates to: TSGKMPSKSHCGPFEMVTPWSSA*ADSCRV
Trigger: GACCCGGCAGCTGTCTGCGCACGCCGAGCTCCACGG...TGTCACCATTTCAAAGGGCCCACAGTGACTTTTGCTGGGCATTTTCCCAGATGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp ACATCTGGGAAAATGCCCAGCAAAAGTCACTGTGGGCCCTTTGAAATGGTGACAGTCAGACCAGCGGGATaGCTGTACGCGCGCGCGAGG +
Preference number: 4 (lower is better)
Translates to: TSGKMPSKSHCGPFEMVTVRPAG*LYARAR
Trigger: CCTCGCGCGCGCGTACAGTCATCCCGCTGGTCTGAC...TGTCACCATTTCAAAGGGCCCACAGTGACTTTTGCTGGGCATTTTCCCAGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
CDS-3UTR GCA 90 bp ACATCTGGGAAAATGCCCAGCAAAAGTCACTGTGGGCCCTTTGAAATGGTGACAGGCGGCGGCTTCGGCTaGACAGCTTCCCCGGCTTCA +
Preference number: 4 (lower is better)
Translates to: TSGKMPSKSHCGPFEMVTGGGFG*TASPAS
Trigger: TGAAGCCGGGGAAGCTGTGCAGCCGAAGCCGCCGCC...TGTCACCATTTCAAAGGGCCCACAGTGACTTTTGCTGGGCATTTTCCCAGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp CTGTACTCACAGTCTGTAAACATCTGGGAAAATGCCCAGCAAAAGTCACTGTGGCCGTGGAGCTCGGCGTaGGCAGACAGCTGCCGGGTC +
Preference number: 4 (lower is better)
Translates to: LYSQSVNIWENAQQKSLWPWSSA*ADSCRV
Trigger: GACCCGGCAGCTGTCTGCGCACGCCGAGCTCCACGG...CCACAGTGACTTTTGCTGGGCATTTTCCCAGATGTTTACAGACTGTGAGTACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp AGAAGTACGATTCGTAGATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTGCGTGGAGCTCGGCGTaGGCAGACAGCTGCCGGGTC +
Preference number: 4 (lower is better)
Translates to: RSTIRRCCGWINQSTLAVAWSSA*ADSCRV
Trigger: GACCCGGCAGCTGTCTGCGCACGCCGAGCTCCACGC...AACCGCAAGGGTAGACTGGTTTATCCACCCACAACATCTACGAATCGTACTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511804.5
CDS-3UTR CCA 90 bp AGTACGATTCGTAGATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTTTGGCCCAGCCAGCAGCGTaGAGCTCGGCGTGCGCAGAC +
Preference number: 4 (lower is better)
Translates to: STIRRCCGWINQSTLAVLAQPAA*SSACAD
Trigger: GTCTGCGCACGCCGAGCTCCACGCTGCTGGCTGGGC...CAAAACCGCAAGGGTAGACTGGTTTATCCACCCACAACATCTACGAATCGTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000511804.5
CDS-3UTR TCA 90 bp AGTACGATTCGTAGATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTTTGGTCAGACCAGCGGGATaGCTGTACGCGCGCGCGAGG +
Preference number: 4 (lower is better)
Translates to: STIRRCCGWINQSTLAVLVRPAG*LYARAR
Trigger: CCTCGCGCGCGCGTACAGTCATCCCGCTGGTCTGAC...CAAAACCGCAAGGGTAGACTGGTTTATCCACCCACAACATCTACGAATCGTACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000511804.5
ENST00000648866.1
CDS-3UTR GCA 90 bp CTGTACTCACAGTCTGTAAACATCTGGGAAAATGCCCAGCAAAAGTCACTGTGGGGCGGCGGCTTCGGCTaGACAGCTTCCCCGGCTTCA +
Preference number: 4 (lower is better)
Translates to: LYSQSVNIWENAQQKSLWGGGFG*TASPAS
Trigger: TGAAGCCGGGGAAGCTGTGCAGCCGAAGCCGCCGCC...CCACAGTGACTTTTGCTGGGCATTTTCCCAGATGTTTACAGACTGTGAGTACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp AGAAGTACGATTCGTAGATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTGGCGGCGGCTTCGGCTaGACAGCTTCCCCGGCTTCA +
Preference number: 4 (lower is better)
Translates to: RSTIRRCCGWINQSTLAVGGGFG*TASPAS
Trigger: TGAAGCCGGGGAAGCTGTGCAGCCGAAGCCGCCGCC...AACCGCAAGGGTAGACTGGTTTATCCACCCACAACATCTACGAATCGTACTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000511804.5
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp TTATTTTACACTTATGGGCCACTGCCAACTCAGGGCCTTGGCTTCTGGCTCATTACCGGGTGGGATGGATaGAGCCTCTCCACCGCCTCT +
Preference number: 4 (lower is better)
Translates to: LFYTYGPLPTQGLGFWLITGWDG*SLSTAS
Trigger: AGAGGCGGTGGAGAGGCTTCATCCATCCCACCCGGT...AATGAGCCAGAAGCCAAGGCCCTGAGTTGGCAGTGGCCCATAAGTGTAAAATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp CGAGGAGTGCTTCTAAGGGTGGTCAGTTCATGCTGTCCTTATGGCTGCTCCGGTACGCCAAAGTCATTGTaGTCAAAAGGCCAGCGCCCA +
Preference number: 4 (lower is better)
Translates to: RGVLLRVVSSCCPYGCSGTPKSL*SKGQRP
Trigger: TGGGCGCTGGCCTTTTGATCACAATGACTTTGGCGT...ACCGGAGCAGCCATAAGGACAGCATGAACTGACCACCCTTAGAAGCACTCCTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510697.5
CDS-3UTR GCA 90 bp TATATTGCTAGTCCACAGCTCATCTGCTTTCACGCTGCCTCTTATATCCCATTTCCGTGGAGCTCGGCGTaGGCAGACAGCTGCCGGGTC +
Preference number: 4 (lower is better)
Translates to: YIASPQLICFHAASYIPFPWSSA*ADSCRV
Trigger: GACCCGGCAGCTGTCTGCGCACGCCGAGCTCCACGG...AAATGGGATATAAGAGGCAGCGTGAAAGCAGATGAGCTGTGGACTAGCAATATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp ACATCTGGGAAAATGCCCAGCAAAAGTCACTGTGGGCCCTTTGAAATGGTGACAGACGACCGGGTGGGATaGATGAAGCCTCTCCACCGC +
Preference number: 4 (lower is better)
Translates to: TSGKMPSKSHCGPFEMVTDDRVG*MKPLHR
Trigger: GCGGTGGAGAGGCTTCATCCATCCCACCCGGTCGTC...TGTCACCATTTCAAAGGGCCCACAGTGACTTTTGCTGGGCATTTTCCCAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp TTATTTTACACTTATGGGCCACTGCCAACTCAGGGCCTTGGCTTCTGGCTCATTAAACCTCCTGGGCACTaGTTCTCCCGGGGAGGTCTC +
Preference number: 4 (lower is better)
Translates to: LFYTYGPLPTQGLGFWLIKPPGH*FSRGGL
Trigger: GAGACCTCCCCGGGAGAAGCAGTGCCCAGGAGGTTT...AATGAGCCAGAAGCCAAGGCCCTGAGTTGGCAGTGGCCCATAAGTGTAAAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp TCCGTTCATGGGGACCGAGGTCATCAGACTTTTGGACTGGTAACAGCAGCAGCATGCCAGCCAAAAGGATaGCCTGAGGCAAAGGGTTTC +
Preference number: 4 (lower is better)
Translates to: SVHGDRGHQTFGLVTAAACQPKG*PEAKGF
Trigger: GAAACCCTTTGCCTCAGGGCATCCTTTTGGCTGGCA...TGCTGCTGCTGTTACCAGTCCAAAAGTCTGATGACCTCGGTCCCCATGAACGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000510697.5
CDS-3UTR CCA 90 bp AGTACGATTCGTAGATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTTTGGACGACCGGGTGGGATaGATGAAGCCTCTCCACCGC +
Preference number: 4 (lower is better)
Translates to: STIRRCCGWINQSTLAVLDDRVG*MKPLHR
Trigger: GCGGTGGAGAGGCTTCATCCATCCCACCCGGTCGTC...CAAAACCGCAAGGGTAGACTGGTTTATCCACCCACAACATCTACGAATCGTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000511804.5
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp CTGCTGTACTCACAGTCTGTAAACATCTGGGAAAATGCCCAGCAAAAGTCACTGGACGACCGGGTGGGATaGATGAAGCCTCTCCACCGC +
Preference number: 4 (lower is better)
Translates to: LLYSQSVNIWENAQQKSLDDRVG*MKPLHR
Trigger: GCGGTGGAGAGGCTTCATCCATCCCACCCGGTCGTC...CAGTGACTTTTGCTGGGCATTTTCCCAGATGTTTACAGACTGTGAGTACAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp TTATGGGCCACTGCCAACTCAGGGCCTTGGCTTCTGGCTCATTTCTACAAAGTTCTTCAGAAAACCTCCTaGGCACTGCTTCTCCCGGGG +
Preference number: 4 (lower is better)
Translates to: LWATANSGPWLLAHFYKVLQKTS*ALLLPG
Trigger: CCCCGGGAGAAGCAGTGCCCAGGAGGTTTTCTGAAG...AACTTTGTAGAAATGAGCCAGAAGCCAAGGCCCTGAGTTGGCAGTGGCCCATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp CGTTCATGGGGACCGAGGTCATCAGACTTTTGGACTGGTAACAGCAGCAGCAGATGCTTGTTCCGTTCATaGGGACCGAGGTCATCAGAC +
Preference number: 4 (lower is better)
Translates to: RSWGPRSSDFWTGNSSSRCLFRS*GPRSSD
Trigger: GTCTGATGACCTCGGTCCCCATGAACGGAACAAGCA...TCTGCTGCTGCTGTTACCAGTCCAAAAGTCTGATGACCTCGGTCCCCATGAACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510697.5
CDS-3UTR GCA 90 bp CTGTACTCACAGTCTGTAAACATCTGGGAAAATGCCCAGCAAAAGTCACTGTGGAAACCTCCTGGGCACTaGTTCTCCCGGGGAGGTCTC +
Preference number: 4 (lower is better)
Translates to: LYSQSVNIWENAQQKSLWKPPGH*FSRGGL
Trigger: GAGACCTCCCCGGGAGAAGCAGTGCCCAGGAGGTTT...CCACAGTGACTTTTGCTGGGCATTTTCCCAGATGTTTACAGACTGTGAGTACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp AGAAGTACGATTCGTAGATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTAAACCTCCTGGGCACTaGTTCTCCCGGGGAGGTCTC +
Preference number: 4 (lower is better)
Translates to: RSTIRRCCGWINQSTLAVKPPGH*FSRGGL
Trigger: GAGACCTCCCCGGGAGAAGCAGTGCCCAGGAGGTTT...AACCGCAAGGGTAGACTGGTTTATCCACCCACAACATCTACGAATCGTACTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000511804.5
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp CTGCTGTACTCACAGTCTGTAAACATCTGGGAAAATGCCCAGCAAAAGTCACTGAAACCTCCTGGGCACTaGTTCTCCCGGGGAGGTCTC +
Preference number: 4 (lower is better)
Translates to: LLYSQSVNIWENAQQKSLKPPGH*FSRGGL
Trigger: GAGACCTCCCCGGGAGAAGCAGTGCCCAGGAGGTTT...CAGTGACTTTTGCTGGGCATTTTCCCAGATGTTTACAGACTGTGAGTACAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp TTATGGGCCACTGCCAACTCAGGGCCTTGGCTTCTGGCTCATTTCTACAAAGTTACACTTATGGGCCACTaGCAACTCAGGGCCTTGGCT +
Preference number: 4 (lower is better)
Translates to: LWATANSGPWLLAHFYKVTLMGH*QLRALA
Trigger: AGCCAAGGCCCTGAGTTGGCAGTGGCCCATAAGTGT...AACTTTGTAGAAATGAGCCAGAAGCCAAGGCCCTGAGTTGGCAGTGGCCCATAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp AATCACCTAGATTTTACTCAGACTATGCACTTTGGCACAACTGCGGGGCACAATGACGACCGGGTGGGATaGATGAAGCCTCTCCACCGC +
Preference number: 4 (lower is better)
Translates to: NHLDFTQTMHFGTTAGHNDDRVG*MKPLHR
Trigger: GCGGTGGAGAGGCTTCATCCATCCCACCCGGTCGTC...ATTGTGCCCCGCAGTTGTGCCAAAGTGCATAGTCTGAGTAAAATCTAGGTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp AGAAGTACGATTCGTAGATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTCTCCAAGGGCAAGACTaGCTATCAGCGCGTTGGGGC +
Preference number: 4 (lower is better)
Translates to: RSTIRRCCGWINQSTLAVLQGQD*LSARWG
Trigger: GCCCCAACGCGCTGATAGCCAGTCTTGCCCTTGGAG...AACCGCAAGGGTAGACTGGTTTATCCACCCACAACATCTACGAATCGTACTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp AGTCATGAGGGTGTAGAAGATCGCAGTGCACACCAAGGGCATACAGAAATAGAACTCCAAGGGCAAGACTaGCTATCAGCGCGTTGGGGC +
Preference number: 4 (lower is better)
Translates to: SHEGVEDRSAHQGHTEIELQGQD*LSARWG
Trigger: GCCCCAACGCGCTGATAGCCAGTCTTGCCCTTGGAG...TTCTATTTCTGTATGCCCTTGGTGTGCACTGCGATCTTCTACACCCTCATGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510697.5
CDS-3UTR CCA 90 bp CTGTACTCACAGTCTGTAAACATCTGGGAAAATGCCCAGCAAAAGTCACTGTGGCTCCAAGGGCAAGACTaGCTATCAGCGCGTTGGGGC +
Preference number: 4 (lower is better)
Translates to: LYSQSVNIWENAQQKSLWLQGQD*LSARWG
Trigger: GCCCCAACGCGCTGATAGCCAGTCTTGCCCTTGGAG...CCACAGTGACTTTTGCTGGGCATTTTCCCAGATGTTTACAGACTGTGAGTACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp TATATTGCTAGTCCACAGCTCATCTGCTTTCACGCTGCCTCTTATATCCCATTTACCGGGTGGGATGGATaGAGCCTCTCCACCGCCTCT +
Preference number: 4 (lower is better)
Translates to: YIASPQLICFHAASYIPFTGWDG*SLSTAS
Trigger: AGAGGCGGTGGAGAGGCTTCATCCATCCCACCCGGT...AAATGGGATATAAGAGGCAGCGTGAAAGCAGATGAGCTGTGGACTAGCAATATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp TTATGGGCCACTGCCAACTCAGGGCCTTGGCTTCTGGCTCATTTCTACAAAGTTACGCCAAAGTCATTGTaGTCAAAAGGCCAGCGCCCA +
Preference number: 4 (lower is better)
Translates to: LWATANSGPWLLAHFYKVTPKSL*SKGQRP
Trigger: TGGGCGCTGGCCTTTTGATCACAATGACTTTGGCGT...AACTTTGTAGAAATGAGCCAGAAGCCAAGGCCCTGAGTTGGCAGTGGCCCATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324300.10
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp TTATGGGCCACTGCCAACTCAGGGCCTTGGCTTCTGGCTCATTTCTACAAAGTTGATCCTGAGCAGAGTTaGATTCCCCACCATTCCCAC +
Preference number: 4 (lower is better)
Translates to: LWATANSGPWLLAHFYKVDPEQS*IPHHSH
Trigger: GTGGGAATGGTGGGGAATGCAACTCTGCTCAGGATC...AACTTTGTAGAAATGAGCCAGAAGCCAAGGCCCTGAGTTGGCAGTGGCCCATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp GAGGGTGTAGAAGATCGCAGTGCACACCAAGGGCATACAGAAATAGAACCCGAACCCACCGAGGACTTCTaGAAAAAGGGGAACAGCTTG +
Preference number: 4 (lower is better)
Translates to: EGVEDRSAHQGHTEIEPEPTEDF*KKGNSL
Trigger: CAAGCTGTTCCCCTTTTTGCAGAAGTCCTCGGTGGG...TTCGGGTTCTATTTCTGTATGCCCTTGGTGTGCACTGCGATCTTCTACACCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510697.5
CDS-3UTR GCA 90 bp CTGGATGCTTGTTCCGTTCATGGGGACCGAGGTCATCAGACTTTTGGACTGGTAGGTTCTTCCACTGGATaGTTGTTCCGTTCATGGGGA +
Preference number: 4 (lower is better)
Translates to: LDACSVHGDRGHQTFGLVGSSTG*LFRSWG
Trigger: TCCCCATGAACGGAACAAGCATCCAGTGGAAGAACC...TACCAGTCCAAAAGTCTGATGACCTCGGTCCCCATGAACGGAACAAGCATCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000510697.5
CDS-3UTR GCA 90 bp TTATTTTACACTTATGGGCCACTGCCAACTCAGGGCCTTGGCTTCTGGCTCATTACACTTATGGGCCACTaGCAACTCAGGGCCTTGGCT +
Preference number: 4 (lower is better)
Translates to: LFYTYGPLPTQGLGFWLITLMGH*QLRALA
Trigger: AGCCAAGGCCCTGAGTTGGCAGTGGCCCATAAGTGT...AATGAGCCAGAAGCCAAGGCCCTGAGTTGGCAGTGGCCCATAAGTGTAAAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp CTGTACTCACAGTCTGTAAACATCTGGGAAAATGCCCAGCAAAAGTCACTGTGGCCTTCCACTCCACTCTaGGACCGCAAGAGCGTCCTA +
Preference number: 4 (lower is better)
Translates to: LYSQSVNIWENAQQKSLWPSTPL*DRKSVL
Trigger: TAGGACGCTCTTGCGGTCCCAGAGTGGAGTGGAAGG...CCACAGTGACTTTTGCTGGGCATTTTCCCAGATGTTTACAGACTGTGAGTACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
CDS-3UTR CCA 90 bp AGTACGATTCGTAGATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTTTGCTTCAGAAAACCTCCTaGGCACTGCTTCTCCCGGGG +
Preference number: 4 (lower is better)
Translates to: STIRRCCGWINQSTLAVLLQKTS*ALLLPG
Trigger: CCCCGGGAGAAGCAGTGCCCAGGAGGTTTTCTGAAG...CAAAACCGCAAGGGTAGACTGGTTTATCCACCCACAACATCTACGAATCGTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000511804.5
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp CTGGATGCTTGTTCCGTTCATGGGGACCGAGGTCATCAGACTTTTGGACTGGTATGGCTATCAGCGCGTTaGGGCCATTCCTCATACATT +
Preference number: 4 (lower is better)
Translates to: LDACSVHGDRGHQTFGLVWLSAR*GHSSYI
Trigger: AATGTATGAGGAATGGCCCCAACGCGCTGATAGCCA...TACCAGTCCAAAAGTCTGATGACCTCGGTCCCCATGAACGGAACAAGCATCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510697.5
CDS-3UTR CCA 90 bp TACCGAGGAGTGCTTCTAAGGGTGGTCAGTTCATGCTGTCCTTATGGCTGCTCCTCGTGGTTCTTCCACTaGATGCTTGTTCCGTTCATG +
Preference number: 4 (lower is better)
Translates to: YRGVLLRVVSSCCPYGCSSWFFH*MLVPFM
Trigger: CATGAACGGAACAAGCATCCAGTGGAAGAACCACGA...GGAGCAGCCATAAGGACAGCATGAACTGACCACCCTTAGAAGCACTCCTCGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510697.5
CDS-3UTR TCA 90 bp ATTACAAGATTTATGAATGCAGAAGGTTGCTACAGGTTAAAATGGACTGAGGCAGTCAGACCAGCGGGATaGCTGTACGCGCGCGCGAGG +
Preference number: 4 (lower is better)
Translates to: ITRFMNAEGCYRLKWTEAVRPAG*LYARAR
Trigger: CCTCGCGCGCGCGTACAGTCATCCCGCTGGTCTGAC...TGCCTCAGTCCATTTTAACCTGTAGCAACCTTCTGCATTCATAAATCTTGTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
CDS-3UTR TCA 90 bp TTATTTTACACTTATGGGCCACTGCCAACTCAGGGCCTTGGCTTCTGGCTCATTGCCAAAAGGATGCCCTaGGGCAAAGGGTTTCCATCT +
Preference number: 4 (lower is better)
Translates to: LFYTYGPLPTQGLGFWLIAKRMP*GKGFPS
Trigger: AGATGGAAACCCTTTGCCTCAGGGCATCCTTTTGGC...AATGAGCCAGAAGCCAAGGCCCTGAGTTGGCAGTGGCCCATAAGTGTAAAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp ACATCTGGGAAAATGCCCAGCAAAAGTCACTGTGGGCCCTTTGAAATGGTGACAGCCAAAAGGATGCCCTaGGGCAAAGGGTTTCCATCT +
Preference number: 4 (lower is better)
Translates to: TSGKMPSKSHCGPFEMVTAKRMP*GKGFPS
Trigger: AGATGGAAACCCTTTGCCTCAGGGCATCCTTTTGGC...TGTCACCATTTCAAAGGGCCCACAGTGACTTTTGCTGGGCATTTTCCCAGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp CTGCTGTACTCACAGTCTGTAAACATCTGGGAAAATGCCCAGCAAAAGTCACTGGGAATCCCAATTCCCTaGACACGACTCCAGGAGGCA +
Preference number: 4 (lower is better)
Translates to: LLYSQSVNIWENAQQKSLGIPIP*TRLQEA
Trigger: TGCCTCCTGGAGTCGTGTTCAGGGAATTGGGATTCC...CAGTGACTTTTGCTGGGCATTTTCCCAGATGTTTACAGACTGTGAGTACAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324300.10
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp ACATCTGGGAAAATGCCCAGCAAAAGTCACTGTGGGCCCTTTGAAATGGTGACAGGCCCTTTGAAATGGTaGCAATGTGGGAGGGAGATG +
Preference number: 4 (lower is better)
Translates to: TSGKMPSKSHCGPFEMVTGPLKW*QCGREM
Trigger: CATCTCCCTCCCACATTGTCACCATTTCAAAGGGCC...TGTCACCATTTCAAAGGGCCCACAGTGACTTTTGCTGGGCATTTTCCCAGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp ACATCTGGGAAAATGCCCAGCAAAAGTCACTGTGGGCCCTTTGAAATGGTGACACCCACCGAGGACTTCTaGAAAAAGGGGAACAGCTTG +
Preference number: 4 (lower is better)
Translates to: TSGKMPSKSHCGPFEMVTPTEDF*KKGNSL
Trigger: CAAGCTGTTCCCCTTTTTGCAGAAGTCCTCGGTGGG...TGTCACCATTTCAAAGGGCCCACAGTGACTTTTGCTGGGCATTTTCCCAGATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000324300.10
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp TTATGGGCCACTGCCAACTCAGGGCCTTGGCTTCTGGCTCATTTCTACAAAGTTGGTTCTTCCACTGGATaGTTGTTCCGTTCATGGGGA +
Preference number: 4 (lower is better)
Translates to: LWATANSGPWLLAHFYKVGSSTG*LFRSWG
Trigger: TCCCCATGAACGGAACAAGCATCCAGTGGAAGAACC...AACTTTGTAGAAATGAGCCAGAAGCCAAGGCCCTGAGTTGGCAGTGGCCCATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp ACATCTGGGAAAATGCCCAGCAAAAGTCACTGTGGGCCCTTTGAAATGGTGACATGCTGTCCTTATGGCTaGTCCGGTCTGTGTTGTGGT +
Preference number: 4 (lower is better)
Translates to: TSGKMPSKSHCGPFEMVTCCPYG*SGLCCG
Trigger: ACCACAACACAGACCGGAGCAGCCATAAGGACAGCA...TGTCACCATTTCAAAGGGCCCACAGTGACTTTTGCTGGGCATTTTCCCAGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp AATCACCTAGATTTTACTCAGACTATGCACTTTGGCACAACTGCGGGGCACAATCTTCAGAAAACCTCCTaGGCACTGCTTCTCCCGGGG +
Preference number: 4 (lower is better)
Translates to: NHLDFTQTMHFGTTAGHNLQKTS*ALLLPG
Trigger: CCCCGGGAGAAGCAGTGCCCAGGAGGTTTTCTGAAG...ATTGTGCCCCGCAGTTGTGCCAAAGTGCATAGTCTGAGTAAAATCTAGGTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp TTATGGGCCACTGCCAACTCAGGGCCTTGGCTTCTGGCTCATTTCTACAAAGTTTGGCTATCAGCGCGTTaGGGCCATTCCTCATACATT +
Preference number: 4 (lower is better)
Translates to: LWATANSGPWLLAHFYKVWLSAR*GHSSYI
Trigger: AATGTATGAGGAATGGCCCCAACGCGCTGATAGCCA...AACTTTGTAGAAATGAGCCAGAAGCCAAGGCCCTGAGTTGGCAGTGGCCCATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp TTATGGGCCACTGCCAACTCAGGGCCTTGGCTTCTGGCTCATTTCTACAAAGTTTTCATGCTGTCCTTATaGCTGCTCCGGTCTGTGTTG +
Preference number: 4 (lower is better)
Translates to: LWATANSGPWLLAHFYKVFMLSL*LLRSVL
Trigger: CAACACAGACCGGAGCAGCCATAAGGACAGCATGAA...AACTTTGTAGAAATGAGCCAGAAGCCAAGGCCCTGAGTTGGCAGTGGCCCATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp GAGGGTGTAGAAGATCGCAGTGCACACCAAGGGCATACAGAAATAGAACCCGAATTCATGCTGTCCTTATaGCTGCTCCGGTCTGTGTTG +
Preference number: 4 (lower is better)
Translates to: EGVEDRSAHQGHTEIEPEFMLSL*LLRSVL
Trigger: CAACACAGACCGGAGCAGCCATAAGGACAGCATGAA...TTCGGGTTCTATTTCTGTATGCCCTTGGTGTGCACTGCGATCTTCTACACCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510697.5
CDS-3UTR CCA 90 bp TTATGGGCCACTGCCAACTCAGGGCCTTGGCTTCTGGCTCATTTCTACAAAGTTAGGGAGATGTTGGGGTaGGGAGTTAGGTTCATACTG +
Preference number: 4 (lower is better)
Translates to: LWATANSGPWLLAHFYKVREMLG*GVRFIL
Trigger: CAGTATGAACCTAACTCCCCACCCCAACATCTCCCT...AACTTTGTAGAAATGAGCCAGAAGCCAAGGCCCTGAGTTGGCAGTGGCCCATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp ACATCTGGGAAAATGCCCAGCAAAAGTCACTGTGGGCCCTTTGAAATGGTGACAGCCAACTCAGGGCCTTaGCTTCTGGCTCATTTCTAC +
Preference number: 4 (lower is better)
Translates to: TSGKMPSKSHCGPFEMVTANSGP*LLAHFY
Trigger: GTAGAAATGAGCCAGAAGCCAAGGCCCTGAGTTGGC...TGTCACCATTTCAAAGGGCCCACAGTGACTTTTGCTGGGCATTTTCCCAGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp AGAAGTACGATTCGTAGATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTACGCCAAAGTCATTGTaGTCAAAAGGCCAGCGCCCA +
Preference number: 4 (lower is better)
Translates to: RSTIRRCCGWINQSTLAVTPKSL*SKGQRP
Trigger: TGGGCGCTGGCCTTTTGATCACAATGACTTTGGCGT...AACCGCAAGGGTAGACTGGTTTATCCACCCACAACATCTACGAATCGTACTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000511804.5
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp ATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTTTGGAAAGCATTTCTTCGGAATCCCAATTCCCTaGACACGACTCCAGGAGGCA +
Preference number: 4 (lower is better)
Translates to: MLWVDKPVYPCGFGKHFFGIPIP*TRLQEA
Trigger: TGCCTCCTGGAGTCGTGTTCAGGGAATTGGGATTCC...GAAGAAATGCTTTCCAAAACCGCAAGGGTAGACTGGTTTATCCACCCACAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000511804.5
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp GAGGGTGTAGAAGATCGCAGTGCACACCAAGGGCATACAGAAATAGAACCCGAAACATCTCACAAGTCATaGGGGTGTAGAAGATCGCAG +
Preference number: 4 (lower is better)
Translates to: EGVEDRSAHQGHTEIEPETSHKS*GCRRSQ
Trigger: CTGCGATCTTCTACACCCTCATGACTTGTGAGATGT...TTCGGGTTCTATTTCTGTATGCCCTTGGTGTGCACTGCGATCTTCTACACCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510697.5
CDS-3UTR TCA 90 bp AAGGGTGGTCAGTTCATGCTGTCCTTATGGCTGCTCCGGTCTGTGTTGTGGTTGGCAGCAGCAGAGGCATaGCTGGAAACAATTTTTAAA +
Preference number: 4 (lower is better)
Translates to: KGGQFMLSLWLLRSVLWLAAAEA*LETIFK
Trigger: TTTAAAAATTGTTTCCAGTCATGCCTCTGCTGCTGC...CAACCACAACACAGACCGGAGCAGCCATAAGGACAGCATGAACTGACCACCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510697.5
CDS-3UTR TCA 90 bp TTATTTTACACTTATGGGCCACTGCCAACTCAGGGCCTTGGCTTCTGGCTCATTGTGACCAGTTCCCATTaGACATTCACCAGAACTGCC +
Preference number: 4 (lower is better)
Translates to: LFYTYGPLPTQGLGFWLIVTSSH*TFTRTA
Trigger: GGCAGTTCTGGTGAATGTTCAATGGGAACTGGTCAC...AATGAGCCAGAAGCCAAGGCCCTGAGTTGGCAGTGGCCCATAAGTGTAAAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp AGTACGATTCGTAGATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTTTGGGCCCTTTGAAATGGTaGCAATGTGGGAGGGAGATG +
Preference number: 4 (lower is better)
Translates to: STIRRCCGWINQSTLAVLGPLKW*QCGREM
Trigger: CATCTCCCTCCCACATTGTCACCATTTCAAAGGGCC...CAAAACCGCAAGGGTAGACTGGTTTATCCACCCACAACATCTACGAATCGTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp TTATTTTACACTTATGGGCCACTGCCAACTCAGGGCCTTGGCTTCTGGCTCATTTCACTGTGGGCCCTTTaGAATGGTGACAATGTGGGA +
Preference number: 4 (lower is better)
Translates to: LFYTYGPLPTQGLGFWLISLWAL*NGDNVG
Trigger: TCCCACATTGTCACCATTTCAAAGGGCCCACAGTGA...AATGAGCCAGAAGCCAAGGCCCTGAGTTGGCAGTGGCCCATAAGTGTAAAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp ACATCTGGGAAAATGCCCAGCAAAAGTCACTGTGGGCCCTTTGAAATGGTGACATCACTGTGGGCCCTTTaGAATGGTGACAATGTGGGA +
Preference number: 4 (lower is better)
Translates to: TSGKMPSKSHCGPFEMVTSLWAL*NGDNVG
Trigger: TCCCACATTGTCACCATTTCAAAGGGCCCACAGTGA...TGTCACCATTTCAAAGGGCCCACAGTGACTTTTGCTGGGCATTTTCCCAGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp CTGTACTCACAGTCTGTAAACATCTGGGAAAATGCCCAGCAAAAGTCACTGTGGTGCCAGCCAAAAGGATaGCCTGAGGCAAAGGGTTTC +
Preference number: 4 (lower is better)
Translates to: LYSQSVNIWENAQQKSLWCQPKG*PEAKGF
Trigger: GAAACCCTTTGCCTCAGGGCATCCTTTTGGCTGGCA...CCACAGTGACTTTTGCTGGGCATTTTCCCAGATGTTTACAGACTGTGAGTACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp CTGCTGTACTCACAGTCTGTAAACATCTGGGAAAATGCCCAGCAAAAGTCACTGTGCCAGCCAAAAGGATaGCCTGAGGCAAAGGGTTTC +
Preference number: 4 (lower is better)
Translates to: LLYSQSVNIWENAQQKSLCQPKG*PEAKGF
Trigger: GAAACCCTTTGCCTCAGGGCATCCTTTTGGCTGGCA...CAGTGACTTTTGCTGGGCATTTTCCCAGATGTTTACAGACTGTGAGTACAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp AGTACGATTCGTAGATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTTTGGATCCTGAGCAGAGTTaGATTCCCCACCATTCCCAC +
Preference number: 4 (lower is better)
Translates to: STIRRCCGWINQSTLAVLDPEQS*IPHHSH
Trigger: GTGGGAATGGTGGGGAATGCAACTCTGCTCAGGATC...CAAAACCGCAAGGGTAGACTGGTTTATCCACCCACAACATCTACGAATCGTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp AGTCATGAGGGTGTAGAAGATCGCAGTGCACACCAAGGGCATACAGAAATAGAAGATCCTGAGCAGAGTTaGATTCCCCACCATTCCCAC +
Preference number: 4 (lower is better)
Translates to: SHEGVEDRSAHQGHTEIEDPEQS*IPHHSH
Trigger: GTGGGAATGGTGGGGAATGCAACTCTGCTCAGGATC...TTCTATTTCTGTATGCCCTTGGTGTGCACTGCGATCTTCTACACCCTCATGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510697.5
CDS-3UTR GCA 90 bp AGAAGTACGATTCGTAGATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTGATCCTGAGCAGAGTTaGATTCCCCACCATTCCCAC +
Preference number: 4 (lower is better)
Translates to: RSTIRRCCGWINQSTLAVDPEQS*IPHHSH
Trigger: GTGGGAATGGTGGGGAATGCAACTCTGCTCAGGATC...AACCGCAAGGGTAGACTGGTTTATCCACCCACAACATCTACGAATCGTACTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp CGAGGAGTGCTTCTAAGGGTGGTCAGTTCATGCTGTCCTTATGGCTGCTCCGGTAAAAGGGGAACAGCTTaGAAAGAAATACGCCAAAGT +
Preference number: 4 (lower is better)
Translates to: RGVLLRVVSSCCPYGCSGKRGTA*KEIRQS
Trigger: ACTTTGGCGTATTTCTTTGCAAGCTGTTCCCCTTTT...ACCGGAGCAGCCATAAGGACAGCATGAACTGACCACCCTTAGAAGCACTCCTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510697.5
CDS-3UTR GCA 90 bp AGAAGTACGATTCGTAGATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTCCCACCGAGGACTTCTaGAAAAAGGGGAACAGCTTG +
Preference number: 4 (lower is better)
Translates to: RSTIRRCCGWINQSTLAVPTEDF*KKGNSL
Trigger: CAAGCTGTTCCCCTTTTTGCAGAAGTCCTCGGTGGG...AACCGCAAGGGTAGACTGGTTTATCCACCCACAACATCTACGAATCGTACTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000511804.5
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp CTGTACTCACAGTCTGTAAACATCTGGGAAAATGCCCAGCAAAAGTCACTGTGGCCCACCGAGGACTTCTaGAAAAAGGGGAACAGCTTG +
Preference number: 4 (lower is better)
Translates to: LYSQSVNIWENAQQKSLWPTEDF*KKGNSL
Trigger: CAAGCTGTTCCCCTTTTTGCAGAAGTCCTCGGTGGG...CCACAGTGACTTTTGCTGGGCATTTTCCCAGATGTTTACAGACTGTGAGTACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000324300.10
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp TTATGGGCCACTGCCAACTCAGGGCCTTGGCTTCTGGCTCATTTCTACAAAGTTTGTAGAAGATCGCAGTaGACACCAAGGGCATACAGA +
Preference number: 4 (lower is better)
Translates to: LWATANSGPWLLAHFYKVCRRSQ*TPRAYR
Trigger: TCTGTATGCCCTTGGTGTGCACTGCGATCTTCTACA...AACTTTGTAGAAATGAGCCAGAAGCCAAGGCCCTGAGTTGGCAGTGGCCCATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp CTGGATGCTTGTTCCGTTCATGGGGACCGAGGTCATCAGACTTTTGGACTGGTAGCAGAAAACTGTTTTTaGCACTTCTCGACGCTGCTT +
Preference number: 4 (lower is better)
Translates to: LDACSVHGDRGHQTFGLVAENCF*HFSTLL
Trigger: AAGCAGCGTCGAGAAGTGGCAAAAACAGTTTTCTGC...TACCAGTCCAAAAGTCTGATGACCTCGGTCCCCATGAACGGAACAAGCATCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000510697.5
CDS-3UTR GCA 90 bp AGTACGATTCGTAGATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTTTGAGGGTGGTCAGTTCATaGTGTCCTTATGGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: STIRRCCGWINQSTLAVLRVVSS*CPYGCS
Trigger: GGAGCAGCCATAAGGACAGCATGAACTGACCACCCT...CAAAACCGCAAGGGTAGACTGGTTTATCCACCCACAACATCTACGAATCGTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000511804.5
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp CTGTGTTGTGGTTGTTTTGATCGTGGTTCTTCCACTGGATGCTTGTTCCGTTCAAGGGTGGTCAGTTCATaGTGTCCTTATGGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LCCGCFDRGSSTGCLFRSRVVSS*CPYGCS
Trigger: GGAGCAGCCATAAGGACAGCATGAACTGACCACCCT...TGAACGGAACAAGCATCCAGTGGAAGAACCACGATCAAAACAACCACAACACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510697.5
CDS-3UTR GCA 90 bp AGAAGTACGATTCGTAGATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTAGGGTGGTCAGTTCATaGTGTCCTTATGGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: RSTIRRCCGWINQSTLAVRVVSS*CPYGCS
Trigger: GGAGCAGCCATAAGGACAGCATGAACTGACCACCCT...AACCGCAAGGGTAGACTGGTTTATCCACCCACAACATCTACGAATCGTACTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000511804.5
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp AGAAGTACGATTCGTAGATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTACCTTCCAGCTATCCTaGGACGCGGCCACTAAAAAG +
Preference number: 4 (lower is better)
Translates to: RSTIRRCCGWINQSTLAVTFQLS*DAATKK
Trigger: CTTTTTAGTGGCCGCGTCCCAGGATAGCTGGAAGGT...AACCGCAAGGGTAGACTGGTTTATCCACCCACAACATCTACGAATCGTACTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000511804.5
ENST00000648866.1
CDS-3UTR CCA 90 bp CTGTACTCACAGTCTGTAAACATCTGGGAAAATGCCCAGCAAAAGTCACTGTGGACCTTCCAGCTATCCTaGGACGCGGCCACTAAAAAG +
Preference number: 4 (lower is better)
Translates to: LYSQSVNIWENAQQKSLWTFQLS*DAATKK
Trigger: CTTTTTAGTGGCCGCGTCCCAGGATAGCTGGAAGGT...CCACAGTGACTTTTGCTGGGCATTTTCCCAGATGTTTACAGACTGTGAGTACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
CDS-3UTR CCA 90 bp CCTAGATTTTACTCAGACTATGCACTTTGGCACAACTGCGGGGCACAATTATTACTTCAGAAAACCTCCTaGGCACTGCTTCTCCCGGGG +
Preference number: 4 (lower is better)
Translates to: PRFYSDYALWHNCGAQLLLQKTS*ALLLPG
Trigger: CCCCGGGAGAAGCAGTGCCCAGGAGGTTTTCTGAAG...TAATAATTGTGCCCCGCAGTTGTGCCAAAGTGCATAGTCTGAGTAAAATCTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp ACATCTGGGAAAATGCCCAGCAAAAGTCACTGTGGGCCCTTTGAAATGGTGACATGGCTATCAGCGCGTTaGGGCCATTCCTCATACATT +
Preference number: 4 (lower is better)
Translates to: TSGKMPSKSHCGPFEMVTWLSAR*GHSSYI
Trigger: AATGTATGAGGAATGGCCCCAACGCGCTGATAGCCA...TGTCACCATTTCAAAGGGCCCACAGTGACTTTTGCTGGGCATTTTCCCAGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp AGTACGATTCGTAGATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTTTGTGCTTGTTCCGTTCATaGGGACCGAGGTCATCAGAC +
Preference number: 4 (lower is better)
Translates to: STIRRCCGWINQSTLAVLCLFRS*GPRSSD
Trigger: GTCTGATGACCTCGGTCCCCATGAACGGAACAAGCA...CAAAACCGCAAGGGTAGACTGGTTTATCCACCCACAACATCTACGAATCGTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000511804.5
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp TTATTTTACACTTATGGGCCACTGCCAACTCAGGGCCTTGGCTTCTGGCTCATTTTCATGCTGTCCTTATaGCTGCTCCGGTCTGTGTTG +
Preference number: 4 (lower is better)
Translates to: LFYTYGPLPTQGLGFWLIFMLSL*LLRSVL
Trigger: CAACACAGACCGGAGCAGCCATAAGGACAGCATGAA...AATGAGCCAGAAGCCAAGGCCCTGAGTTGGCAGTGGCCCATAAGTGTAAAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp TTATTTTACACTTATGGGCCACTGCCAACTCAGGGCCTTGGCTTCTGGCTCATTTCTCCGAGAGGATTATaGGAGTACCGAGGAGTGCTT +
Preference number: 4 (lower is better)
Translates to: LFYTYGPLPTQGLGFWLISPRGL*EYRGVL
Trigger: AAGCACTCCTCGGTACTCCCATAATCCTCTCGGAGA...AATGAGCCAGAAGCCAAGGCCCTGAGTTGGCAGTGGCCCATAAGTGTAAAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp TTATTTTACACTTATGGGCCACTGCCAACTCAGGGCCTTGGCTTCTGGCTCATTGAAATGGTGACAATGTaGGAGGGAGATGTTGGGGTG +
Preference number: 4 (lower is better)
Translates to: LFYTYGPLPTQGLGFWLIEMVTM*EGDVGV
Trigger: CACCCCAACATCTCCCTCCCACATTGTCACCATTTC...AATGAGCCAGAAGCCAAGGCCCTGAGTTGGCAGTGGCCCATAAGTGTAAAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp AGTACGATTCGTAGATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTTTGGCCAACTCAGGGCCTTaGCTTCTGGCTCATTTCTAC +
Preference number: 4 (lower is better)
Translates to: STIRRCCGWINQSTLAVLANSGP*LLAHFY
Trigger: GTAGAAATGAGCCAGAAGCCAAGGCCCTGAGTTGGC...CAAAACCGCAAGGGTAGACTGGTTTATCCACCCACAACATCTACGAATCGTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
3UTR CAA 72 bp TGTGGTTGTTTTGATCGTGGTTCTTCCACTGGATGCTaGTTCCGTTCATGGGGACCGAGGTCATCAGACTTT +
Preference number: 4 (lower is better)
Translates to: CGCFDRGSSTGC*FRSWGPRSSDF
Trigger: AAAGTCTGATGACCTCGGTCCCCATGAACGGAACAAGCATCCAGTGGAAGAACCACGATCAAAACAACCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510697.5
CDS-3UTR TCA 90 bp ATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTTTGGAAAGCATTTCTTCGCCAAAAGGATGCCCTaGGGCAAAGGGTTTCCATCT +
Preference number: 4 (lower is better)
Translates to: MLWVDKPVYPCGFGKHFFAKRMP*GKGFPS
Trigger: AGATGGAAACCCTTTGCCTCAGGGCATCCTTTTGGC...GAAGAAATGCTTTCCAAAACCGCAAGGGTAGACTGGTTTATCCACCCACAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp AGTGCTTCTAAGGGTGGTCAGTTCATGCTGTCCTTATGGCTGCTCCGGTCTGTGGTGAAATCATCCACATaGTTGCTTAGATTTGTGCTG +
Preference number: 4 (lower is better)
Translates to: SASKGGQFMLSLWLLRSVVKSST*LLRFVL
Trigger: CAGCACAAATCTAAGCAATCATGTGGATGATTTCAC...CACAGACCGGAGCAGCCATAAGGACAGCATGAACTGACCACCCTTAGAAGCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510697.5
CDS-3UTR TCA 90 bp ATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTTTGGAAAGCATTTCTTCACGCCAAAGTCATTGTaGTCAAAAGGCCAGCGCCCA +
Preference number: 4 (lower is better)
Translates to: MLWVDKPVYPCGFGKHFFTPKSL*SKGQRP
Trigger: TGGGCGCTGGCCTTTTGATCACAATGACTTTGGCGT...GAAGAAATGCTTTCCAAAACCGCAAGGGTAGACTGGTTTATCCACCCACAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000511804.5
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp TTATTTTACACTTATGGGCCACTGCCAACTCAGGGCCTTGGCTTCTGGCTCATTATTCAAAGGGTACCATaGCGAAGCCAATCGCTTCAG +
Preference number: 4 (lower is better)
Translates to: LFYTYGPLPTQGLGFWLIIQRVP*RSQSLQ
Trigger: CTGAAGCGATTGGCTTCGTCATGGTACCCTTTGAAT...AATGAGCCAGAAGCCAAGGCCCTGAGTTGGCAGTGGCCCATAAGTGTAAAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324300.10
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp ACATCTGGGAAAATGCCCAGCAAAAGTCACTGTGGGCCCTTTGAAATGGTGACAACATCTCACAAGTCATaGGGGTGTAGAAGATCGCAG +
Preference number: 4 (lower is better)
Translates to: TSGKMPSKSHCGPFEMVTTSHKS*GCRRSQ
Trigger: CTGCGATCTTCTACACCCTCATGACTTGTGAGATGT...TGTCACCATTTCAAAGGGCCCACAGTGACTTTTGCTGGGCATTTTCCCAGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp TGGGAGTACCGAGGAGTGCTTCTAAGGGTGGTCAGTTCATGCTGTCCTTATGGCAATATACGGCTTAAATaGAGAGGGAACCAGCAAAGA +
Preference number: 4 (lower is better)
Translates to: WEYRGVLLRVVSSCCPYGNIRLK*RGNQQR
Trigger: TCTTTGCTGGTTCCCTCTTCATTTAAGCCGTATATT...GCCATAAGGACAGCATGAACTGACCACCCTTAGAAGCACTCCTCGGTACTCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510697.5
CDS-3UTR TCA 90 bp TTATTTTACACTTATGGGCCACTGCCAACTCAGGGCCTTGGCTTCTGGCTCATTGTGTTGTGGTTGTTTTaGTCGTGGTTCTTCCACTGG +
Preference number: 4 (lower is better)
Translates to: LFYTYGPLPTQGLGFWLIVLWLF*SWFFHW
Trigger: CCAGTGGAAGAACCACGATCAAAACAACCACAACAC...AATGAGCCAGAAGCCAAGGCCCTGAGTTGGCAGTGGCCCATAAGTGTAAAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp CTGTACTCACAGTCTGTAAACATCTGGGAAAATGCCCAGCAAAAGTCACTGTGGGTGACCAGTTCCCATTaGACATTCACCAGAACTGCC +
Preference number: 4 (lower is better)
Translates to: LYSQSVNIWENAQQKSLWVTSSH*TFTRTA
Trigger: GGCAGTTCTGGTGAATGTTCAATGGGAACTGGTCAC...CCACAGTGACTTTTGCTGGGCATTTTCCCAGATGTTTACAGACTGTGAGTACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp CTGTACTCACAGTCTGTAAACATCTGGGAAAATGCCCAGCAAAAGTCACTGTGGTCACTGTGGGCCCTTTaGAATGGTGACAATGTGGGA +
Preference number: 4 (lower is better)
Translates to: LYSQSVNIWENAQQKSLWSLWAL*NGDNVG
Trigger: TCCCACATTGTCACCATTTCAAAGGGCCCACAGTGA...CCACAGTGACTTTTGCTGGGCATTTTCCCAGATGTTTACAGACTGTGAGTACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp AGTACGATTCGTAGATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTTTGTCACTGTGGGCCCTTTaGAATGGTGACAATGTGGGA +
Preference number: 4 (lower is better)
Translates to: STIRRCCGWINQSTLAVLSLWAL*NGDNVG
Trigger: TCCCACATTGTCACCATTTCAAAGGGCCCACAGTGA...CAAAACCGCAAGGGTAGACTGGTTTATCCACCCACAACATCTACGAATCGTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp AATCACCTAGATTTTACTCAGACTATGCACTTTGGCACAACTGCGGGGCACAATTGCCAGCCAAAAGGATaGCCTGAGGCAAAGGGTTTC +
Preference number: 4 (lower is better)
Translates to: NHLDFTQTMHFGTTAGHNCQPKG*PEAKGF
Trigger: GAAACCCTTTGCCTCAGGGCATCCTTTTGGCTGGCA...ATTGTGCCCCGCAGTTGTGCCAAAGTGCATAGTCTGAGTAAAATCTAGGTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp AGTACGATTCGTAGATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTTTGACTCCAGGAGGCAACTaGTCTGTACCTGTCAACACT +
Preference number: 4 (lower is better)
Translates to: STIRRCCGWINQSTLAVLTPGGN*SVPVNT
Trigger: AGTGTTGACAGGTACAGAGCAGTTGCCTCCTGGAGT...CAAAACCGCAAGGGTAGACTGGTTTATCCACCCACAACATCTACGAATCGTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000511804.5
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp ACATCTGGGAAAATGCCCAGCAAAAGTCACTGTGGGCCCTTTGAAATGGTGACATGTAGAAGATCGCAGTaGACACCAAGGGCATACAGA +
Preference number: 4 (lower is better)
Translates to: TSGKMPSKSHCGPFEMVTCRRSQ*TPRAYR
Trigger: TCTGTATGCCCTTGGTGTGCACTGCGATCTTCTACA...TGTCACCATTTCAAAGGGCCCACAGTGACTTTTGCTGGGCATTTTCCCAGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp ATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTTTGGAAAGCATTTCTTCTGCTGTCCTTATGGCTaGTCCGGTCTGTGTTGTGGT +
Preference number: 4 (lower is better)
Translates to: MLWVDKPVYPCGFGKHFFCCPYG*SGLCCG
Trigger: ACCACAACACAGACCGGAGCAGCCATAAGGACAGCA...GAAGAAATGCTTTCCAAAACCGCAAGGGTAGACTGGTTTATCCACCCACAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000511804.5
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp ATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTTTGGAAAGCATTTCTTCACCTTCCAGCTATCCTaGGACGCGGCCACTAAAAAG +
Preference number: 4 (lower is better)
Translates to: MLWVDKPVYPCGFGKHFFTFQLS*DAATKK
Trigger: CTTTTTAGTGGCCGCGTCCCAGGATAGCTGGAAGGT...GAAGAAATGCTTTCCAAAACCGCAAGGGTAGACTGGTTTATCCACCCACAACAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000511804.5
ENST00000648866.1
CDS-3UTR CCA 90 bp ATTACAAGATTTATGAATGCAGAAGGTTGCTACAGGTTAAAATGGACTGAGGCAGACGACCGGGTGGGATaGATGAAGCCTCTCCACCGC +
Preference number: 4 (lower is better)
Translates to: ITRFMNAEGCYRLKWTEADDRVG*MKPLHR
Trigger: GCGGTGGAGAGGCTTCATCCATCCCACCCGGTCGTC...TGCCTCAGTCCATTTTAACCTGTAGCAACCTTCTGCATTCATAAATCTTGTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp CTGCTGTACTCACAGTCTGTAAACATCTGGGAAAATGCCCAGCAAAAGTCACTGTGGCTATCAGCGCGTTaGGGCCATTCCTCATACATT +
Preference number: 4 (lower is better)
Translates to: LLYSQSVNIWENAQQKSLWLSAR*GHSSYI
Trigger: AATGTATGAGGAATGGCCCCAACGCGCTGATAGCCA...CAGTGACTTTTGCTGGGCATTTTCCCAGATGTTTACAGACTGTGAGTACAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp ATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTTTGGAAAGCATTTCTTCTGCTTGTTCCGTTCATaGGGACCGAGGTCATCAGAC +
Preference number: 4 (lower is better)
Translates to: MLWVDKPVYPCGFGKHFFCLFRS*GPRSSD
Trigger: GTCTGATGACCTCGGTCCCCATGAACGGAACAAGCA...GAAGAAATGCTTTCCAAAACCGCAAGGGTAGACTGGTTTATCCACCCACAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000511804.5
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp CTGCTGTACTCACAGTCTGTAAACATCTGGGAAAATGCCCAGCAAAAGTCACTGTTCATGCTGTCCTTATaGCTGCTCCGGTCTGTGTTG +
Preference number: 4 (lower is better)
Translates to: LLYSQSVNIWENAQQKSLFMLSL*LLRSVL
Trigger: CAACACAGACCGGAGCAGCCATAAGGACAGCATGAA...CAGTGACTTTTGCTGGGCATTTTCCCAGATGTTTACAGACTGTGAGTACAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp GGCAATTCTCAAGCTGCCATTCCTTCTGTTCAACATCTCACAAGTCATGAGGGTTCTCCGAGAGGATTATaGGAGTACCGAGGAGTGCTT +
Preference number: 4 (lower is better)
Translates to: GNSQAAIPSVQHLTSHEGSPRGL*EYRGVL
Trigger: AAGCACTCCTCGGTACTCCCATAATCCTCTCGGAGA...ACCCTCATGACTTGTGAGATGTTGAACAGAAGGAATGGCAGCTTGAGAATTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510697.5
CDS-3UTR CCA 90 bp AGTACGATTCGTAGATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTTTGTCAGACTATGCACTTTaGCACAACTGCGGGGCACAA +
Preference number: 4 (lower is better)
Translates to: STIRRCCGWINQSTLAVLSDYAL*HNCGAQ
Trigger: TTGTGCCCCGCAGTTGTGCCAAAGTGCATAGTCTGA...CAAAACCGCAAGGGTAGACTGGTTTATCCACCCACAACATCTACGAATCGTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp AGTACGATTCGTAGATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTTTGATTCAAAGGGTACCATaGCGAAGCCAATCGCTTCAG +
Preference number: 4 (lower is better)
Translates to: STIRRCCGWINQSTLAVLIQRVP*RSQSLQ
Trigger: CTGAAGCGATTGGCTTCGTCATGGTACCCTTTGAAT...CAAAACCGCAAGGGTAGACTGGTTTATCCACCCACAACATCTACGAATCGTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000511804.5
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp AGAAGTACGATTCGTAGATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTGTGTTGTGGTTGTTTTaGTCGTGGTTCTTCCACTGG +
Preference number: 4 (lower is better)
Translates to: RSTIRRCCGWINQSTLAVVLWLF*SWFFHW
Trigger: CCAGTGGAAGAACCACGATCAAAACAACCACAACAC...AACCGCAAGGGTAGACTGGTTTATCCACCCACAACATCTACGAATCGTACTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000511804.5
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp AGTACGATTCGTAGATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTTTGGTGTTGTGGTTGTTTTaGTCGTGGTTCTTCCACTGG +
Preference number: 4 (lower is better)
Translates to: STIRRCCGWINQSTLAVLVLWLF*SWFFHW
Trigger: CCAGTGGAAGAACCACGATCAAAACAACCACAACAC...CAAAACCGCAAGGGTAGACTGGTTTATCCACCCACAACATCTACGAATCGTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000511804.5
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp CTGTACTCACAGTCTGTAAACATCTGGGAAAATGCCCAGCAAAAGTCACTGTGGGTGTTGTGGTTGTTTTaGTCGTGGTTCTTCCACTGG +
Preference number: 4 (lower is better)
Translates to: LYSQSVNIWENAQQKSLWVLWLF*SWFFHW
Trigger: CCAGTGGAAGAACCACGATCAAAACAACCACAACAC...CCACAGTGACTTTTGCTGGGCATTTTCCCAGATGTTTACAGACTGTGAGTACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp AATCACCTAGATTTTACTCAGACTATGCACTTTGGCACAACTGCGGGGCACAATGTGACCAGTTCCCATTaGACATTCACCAGAACTGCC +
Preference number: 4 (lower is better)
Translates to: NHLDFTQTMHFGTTAGHNVTSSH*TFTRTA
Trigger: GGCAGTTCTGGTGAATGTTCAATGGGAACTGGTCAC...ATTGTGCCCCGCAGTTGTGCCAAAGTGCATAGTCTGAGTAAAATCTAGGTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp CCTAGATTTTACTCAGACTATGCACTTTGGCACAACTGCGGGGCACAATTATTAGGCCCTTTGAAATGGTaGCAATGTGGGAGGGAGATG +
Preference number: 4 (lower is better)
Translates to: PRFYSDYALWHNCGAQLLGPLKW*QCGREM
Trigger: CATCTCCCTCCCACATTGTCACCATTTCAAAGGGCC...TAATAATTGTGCCCCGCAGTTGTGCCAAAGTGCATAGTCTGAGTAAAATCTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp TTATTTTACACTTATGGGCCACTGCCAACTCAGGGCCTTGGCTTCTGGCTCATTCTGTCTGGCGAAGTCTaGAAGAAATATCAGACAACC +
Preference number: 4 (lower is better)
Translates to: LFYTYGPLPTQGLGFWLILSGEV*KKYQTT
Trigger: GGTTGTCTGATATTTCTTTCAGACTTCGCCAGACAG...AATGAGCCAGAAGCCAAGGCCCTGAGTTGGCAGTGGCCCATAAGTGTAAAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp TTGCAATTCAAGCAACTGGAACCTGATGTTATTTTACCTGTCCTAAAATATGGCAAACCTCCTGGGCACTaGTTCTCCCGGGGAGGTCTC +
Preference number: 4 (lower is better)
Translates to: LQFKQLEPDVILPVLKYGKPPGH*FSRGGL
Trigger: GAGACCTCCCCGGGAGAAGCAGTGCCCAGGAGGTTT...GCCATATTTTAGGACAGGTAAAATAACATCAGGTTCCAGTTGCTTGAATTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp AGGGCAATTCTCAAGCTGCCATTCCTTCTGTTCAACATCTCACAAGTCATGAGGTGTAGAAGATCGCAGTaGACACCAAGGGCATACAGA +
Preference number: 4 (lower is better)
Translates to: RAILKLPFLLFNISQVMRCRRSQ*TPRAYR
Trigger: TCTGTATGCCCTTGGTGTGCACTGCGATCTTCTACA...CCTCATGACTTGTGAGATGTTGAACAGAAGGAATGGCAGCTTGAGAATTGCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510697.5
CDS-3UTR GCA 90 bp AGAAGTACGATTCGTAGATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTTGTAGAAGATCGCAGTaGACACCAAGGGCATACAGA +
Preference number: 4 (lower is better)
Translates to: RSTIRRCCGWINQSTLAVCRRSQ*TPRAYR
Trigger: TCTGTATGCCCTTGGTGTGCACTGCGATCTTCTACA...AACCGCAAGGGTAGACTGGTTTATCCACCCACAACATCTACGAATCGTACTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000511804.5
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp TTATTTTACACTTATGGGCCACTGCCAACTCAGGGCCTTGGCTTCTGGCTCATTGCAGAAAACTGTTTTTaGCACTTCTCGACGCTGCTT +
Preference number: 4 (lower is better)
Translates to: LFYTYGPLPTQGLGFWLIAENCF*HFSTLL
Trigger: AAGCAGCGTCGAGAAGTGGCAAAAACAGTTTTCTGC...AATGAGCCAGAAGCCAAGGCCCTGAGTTGGCAGTGGCCCATAAGTGTAAAATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp ATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTTTGGAAAGCATTTCTTCGGTTCTTCCACTGGATaGTTGTTCCGTTCATGGGGA +
Preference number: 4 (lower is better)
Translates to: MLWVDKPVYPCGFGKHFFGSSTG*LFRSWG
Trigger: TCCCCATGAACGGAACAAGCATCCAGTGGAAGAACC...GAAGAAATGCTTTCCAAAACCGCAAGGGTAGACTGGTTTATCCACCCACAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000511804.5
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp CCTAGATTTTACTCAGACTATGCACTTTGGCACAACTGCGGGGCACAATTATTAAGGGTGGTCAGTTCATaGTGTCCTTATGGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: PRFYSDYALWHNCGAQLLRVVSS*CPYGCS
Trigger: GGAGCAGCCATAAGGACAGCATGAACTGACCACCCT...TAATAATTGTGCCCCGCAGTTGTGCCAAAGTGCATAGTCTGAGTAAAATCTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp TTATGGGCCACTGCCAACTCAGGGCCTTGGCTTCTGGCTCATTTCTACAAAGTTAAACCAGTCTACCCTTaGGGTTTTGGAAAGCATTTC +
Preference number: 4 (lower is better)
Translates to: LWATANSGPWLLAHFYKVKPVYP*GFGKHF
Trigger: GAAATGCTTTCCAAAACCGCAAGGGTAGACTGGTTT...AACTTTGTAGAAATGAGCCAGAAGCCAAGGCCCTGAGTTGGCAGTGGCCCATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp CACAGGAAACAATATGACCCCAAATACTGCTTTATCAAACCAACCAACCAAACACTTCAGAAAACCTCCTaGGCACTGCTTCTCCCGGGG +
Preference number: 4 (lower is better)
Translates to: HRKQYDPKYCFIKPTNQTLQKTS*ALLLPG
Trigger: CCCCGGGAGAAGCAGTGCCCAGGAGGTTTTCTGAAG...TGTTTGGTTGGTTGGTTTGATAAAGCAGTATTTGGGGTCATATTGTTTCCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp CCTAGATTTTACTCAGACTATGCACTTTGGCACAACTGCGGGGCACAATTATTATGCTTGTTCCGTTCATaGGGACCGAGGTCATCAGAC +
Preference number: 4 (lower is better)
Translates to: PRFYSDYALWHNCGAQLLCLFRS*GPRSSD
Trigger: GTCTGATGACCTCGGTCCCCATGAACGGAACAAGCA...TAATAATTGTGCCCCGCAGTTGTGCCAAAGTGCATAGTCTGAGTAAAATCTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp CTGTACTCACAGTCTGTAAACATCTGGGAAAATGCCCAGCAAAAGTCACTGTGGTCGTGGTTCTTCCACTaGATGCTTGTTCCGTTCATG +
Preference number: 4 (lower is better)
Translates to: LYSQSVNIWENAQQKSLWSWFFH*MLVPFM
Trigger: CATGAACGGAACAAGCATCCAGTGGAAGAACCACGA...CCACAGTGACTTTTGCTGGGCATTTTCCCAGATGTTTACAGACTGTGAGTACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp CTGCTGTACTCACAGTCTGTAAACATCTGGGAAAATGCCCAGCAAAAGTCACTGTCGTGGTTCTTCCACTaGATGCTTGTTCCGTTCATG +
Preference number: 4 (lower is better)
Translates to: LLYSQSVNIWENAQQKSLSWFFH*MLVPFM
Trigger: CATGAACGGAACAAGCATCCAGTGGAAGAACCACGA...CAGTGACTTTTGCTGGGCATTTTCCCAGATGTTTACAGACTGTGAGTACAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp ATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTTTGGAAAGCATTTCTTCTTCATGCTGTCCTTATaGCTGCTCCGGTCTGTGTTG +
Preference number: 4 (lower is better)
Translates to: MLWVDKPVYPCGFGKHFFFMLSL*LLRSVL
Trigger: CAACACAGACCGGAGCAGCCATAAGGACAGCATGAA...GAAGAAATGCTTTCCAAAACCGCAAGGGTAGACTGGTTTATCCACCCACAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000511804.5
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp AATCACCTAGATTTTACTCAGACTATGCACTTTGGCACAACTGCGGGGCACAATTCTCCGAGAGGATTATaGGAGTACCGAGGAGTGCTT +
Preference number: 4 (lower is better)
Translates to: NHLDFTQTMHFGTTAGHNSPRGL*EYRGVL
Trigger: AAGCACTCCTCGGTACTCCCATAATCCTCTCGGAGA...ATTGTGCCCCGCAGTTGTGCCAAAGTGCATAGTCTGAGTAAAATCTAGGTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp ATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTTTGGAAAGCATTTCTTCAGGGAGATGTTGGGGTaGGGAGTTAGGTTCATACTG +
Preference number: 4 (lower is better)
Translates to: MLWVDKPVYPCGFGKHFFREMLG*GVRFIL
Trigger: CAGTATGAACCTAACTCCCCACCCCAACATCTCCCT...GAAGAAATGCTTTCCAAAACCGCAAGGGTAGACTGGTTTATCCACCCACAACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp AATCACCTAGATTTTACTCAGACTATGCACTTTGGCACAACTGCGGGGCACAATTCAGACTATGCACTTTaGCACAACTGCGGGGCACAA +
Preference number: 4 (lower is better)
Translates to: NHLDFTQTMHFGTTAGHNSDYAL*HNCGAQ
Trigger: TTGTGCCCCGCAGTTGTGCCAAAGTGCATAGTCTGA...ATTGTGCCCCGCAGTTGTGCCAAAGTGCATAGTCTGAGTAAAATCTAGGTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp TTATGGGCCACTGCCAACTCAGGGCCTTGGCTTCTGGCTCATTTCTACAAAGTTGTGAAATCATCCACATaGTTGCTTAGATTTGTGCTG +
Preference number: 4 (lower is better)
Translates to: LWATANSGPWLLAHFYKVVKSST*LLRFVL
Trigger: CAGCACAAATCTAAGCAATCATGTGGATGATTTCAC...AACTTTGTAGAAATGAGCCAGAAGCCAAGGCCCTGAGTTGGCAGTGGCCCATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp CACAGGAAACAATATGACCCCAAATACTGCTTTATCAAACCAACCAACCAAACAGGAATCCCAATTCCCTaGACACGACTCCAGGAGGCA +
Preference number: 4 (lower is better)
Translates to: HRKQYDPKYCFIKPTNQTGIPIP*TRLQEA
Trigger: TGCCTCCTGGAGTCGTGTTCAGGGAATTGGGATTCC...TGTTTGGTTGGTTGGTTTGATAAAGCAGTATTTGGGGTCATATTGTTTCCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324300.10
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp ATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTTTGGAAAGCATTTCTTCACATCTCACAAGTCATaGGGGTGTAGAAGATCGCAG +
Preference number: 4 (lower is better)
Translates to: MLWVDKPVYPCGFGKHFFTSHKS*GCRRSQ
Trigger: CTGCGATCTTCTACACCCTCATGACTTGTGAGATGT...GAAGAAATGCTTTCCAAAACCGCAAGGGTAGACTGGTTTATCCACCCACAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000511804.5
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp TTATTTTACACTTATGGGCCACTGCCAACTCAGGGCCTTGGCTTCTGGCTCATTGCAGCAGCAGAGGCATaGCTGGAAACAATTTTTAAA +
Preference number: 4 (lower is better)
Translates to: LFYTYGPLPTQGLGFWLIAAAEA*LETIFK
Trigger: TTTAAAAATTGTTTCCAGTCATGCCTCTGCTGCTGC...AATGAGCCAGAAGCCAAGGCCCTGAGTTGGCAGTGGCCCATAAGTGTAAAATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp TTATGGGCCACTGCCAACTCAGGGCCTTGGCTTCTGGCTCATTTCTACAAAGTTTCTAAAGTTTCATGGTaGCCAGTTCCCATTGAACAT +
Preference number: 4 (lower is better)
Translates to: LWATANSGPWLLAHFYKVSKVSW*PVPIEH
Trigger: ATGTTCAATGGGAACTGGTCACCATGAAACTTTAGA...AACTTTGTAGAAATGAGCCAGAAGCCAAGGCCCTGAGTTGGCAGTGGCCCATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp ACATCTGGGAAAATGCCCAGCAAAAGTCACTGTGGGCCCTTTGAAATGGTGACACTATATACAGTGCACTaGAAGTCTCAGGCAGAGTTA +
Preference number: 4 (lower is better)
Translates to: TSGKMPSKSHCGPFEMVTLYTVH*KSQAEL
Trigger: TAACTCTGCCTGAGACTTTCAGTGCACTGTATATAG...TGTCACCATTTCAAAGGGCCCACAGTGACTTTTGCTGGGCATTTTCCCAGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp TTATTTTACACTTATGGGCCACTGCCAACTCAGGGCCTTGGCTTCTGGCTCATTGAAAACCCCAAGAAGTaGAGAATCGTAAGTTCTGGT +
Preference number: 4 (lower is better)
Translates to: LFYTYGPLPTQGLGFWLIENPKK*RIVSSG
Trigger: ACCAGAACTTACGATTCTTCACTTCTTGGGGTTTTC...AATGAGCCAGAAGCCAAGGCCCTGAGTTGGCAGTGGCCCATAAGTGTAAAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp ACATCTGGGAAAATGCCCAGCAAAAGTCACTGTGGGCCCTTTGAAATGGTGACAGAAAACCCCAAGAAGTaGAGAATCGTAAGTTCTGGT +
Preference number: 4 (lower is better)
Translates to: TSGKMPSKSHCGPFEMVTENPKK*RIVSSG
Trigger: ACCAGAACTTACGATTCTTCACTTCTTGGGGTTTTC...TGTCACCATTTCAAAGGGCCCACAGTGACTTTTGCTGGGCATTTTCCCAGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp AGTACGATTCGTAGATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTTTGCTGTCTGGCGAAGTCTaGAAGAAATATCAGACAACC +
Preference number: 4 (lower is better)
Translates to: STIRRCCGWINQSTLAVLLSGEV*KKYQTT
Trigger: GGTTGTCTGATATTTCTTTCAGACTTCGCCAGACAG...CAAAACCGCAAGGGTAGACTGGTTTATCCACCCACAACATCTACGAATCGTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp TCCGTTCATGGGGACCGAGGTCATCAGACTTTTGGACTGGTAACAGCAGCAGCAGATTGCTTAGATTTGTaGTGTATCTCTCAGGATTAT +
Preference number: 4 (lower is better)
Translates to: SVHGDRGHQTFGLVTAAADCLDL*CISQDY
Trigger: ATAATCCTGAGAGATACAGCACAAATCTAAGCAATC...TGCTGCTGCTGTTACCAGTCCAAAAGTCTGATGACCTCGGTCCCCATGAACGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510697.5
CDS-3UTR GCA 90 bp TATATTGCTAGTCCACAGCTCATCTGCTTTCACGCTGCCTCTTATATCCCATTTACTCCAGGAGGCAACTaGTCTGTACCTGTCAACACT +
Preference number: 4 (lower is better)
Translates to: YIASPQLICFHAASYIPFTPGGN*SVPVNT
Trigger: AGTGTTGACAGGTACAGAGCAGTTGCCTCCTGGAGT...AAATGGGATATAAGAGGCAGCGTGAAAGCAGATGAGCTGTGGACTAGCAATATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000324300.10
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp CCTAGATTTTACTCAGACTATGCACTTTGGCACAACTGCGGGGCACAATTATTAGGTTCTTCCACTGGATaGTTGTTCCGTTCATGGGGA +
Preference number: 4 (lower is better)
Translates to: PRFYSDYALWHNCGAQLLGSSTG*LFRSWG
Trigger: TCCCCATGAACGGAACAAGCATCCAGTGGAAGAACC...TAATAATTGTGCCCCGCAGTTGTGCCAAAGTGCATAGTCTGAGTAAAATCTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp CTGTACTCACAGTCTGTAAACATCTGGGAAAATGCCCAGCAAAAGTCACTGTGGGCACTTTGGCACAACTaGGGGGCACAATTATTAGAT +
Preference number: 4 (lower is better)
Translates to: LYSQSVNIWENAQQKSLWALWHN*GAQLLD
Trigger: ATCTAATAATTGTGCCCCGCAGTTGTGCCAAAGTGC...CCACAGTGACTTTTGCTGGGCATTTTCCCAGATGTTTACAGACTGTGAGTACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp TTATTTTACACTTATGGGCCACTGCCAACTCAGGGCCTTGGCTTCTGGCTCATTATTTTACTCAGACTATaGACTTTGGCACAACTGCGG +
Preference number: 4 (lower is better)
Translates to: LFYTYGPLPTQGLGFWLIILLRL*TLAQLR
Trigger: CCGCAGTTGTGCCAAAGTGCATAGTCTGAGTAAAAT...AATGAGCCAGAAGCCAAGGCCCTGAGTTGGCAGTGGCCCATAAGTGTAAAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp ATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTTTGGAAAGCATTTCTTCAGTCCACAGCTCATCTaGTTTCACGCTGCCTCTTAT +
Preference number: 4 (lower is better)
Translates to: MLWVDKPVYPCGFGKHFFSPQLI*FHAASY
Trigger: ATAAGAGGCAGCGTGAAAGCAGATGAGCTGTGGACT...GAAGAAATGCTTTCCAAAACCGCAAGGGTAGACTGGTTTATCCACCCACAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp AATCACCTAGATTTTACTCAGACTATGCACTTTGGCACAACTGCGGGGCACAATAGTCCACAGCTCATCTaGTTTCACGCTGCCTCTTAT +
Preference number: 4 (lower is better)
Translates to: NHLDFTQTMHFGTTAGHNSPQLI*FHAASY
Trigger: ATAAGAGGCAGCGTGAAAGCAGATGAGCTGTGGACT...ATTGTGCCCCGCAGTTGTGCCAAAGTGCATAGTCTGAGTAAAATCTAGGTGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp CACAGGAAACAATATGACCCCAAATACTGCTTTATCAAACCAACCAACCAAACAACACTTATGGGCCACTaGCAACTCAGGGCCTTGGCT +
Preference number: 4 (lower is better)
Translates to: HRKQYDPKYCFIKPTNQTTLMGH*QLRALA
Trigger: AGCCAAGGCCCTGAGTTGGCAGTGGCCCATAAGTGT...TGTTTGGTTGGTTGGTTTGATAAAGCAGTATTTGGGGTCATATTGTTTCCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp GGTAACATGATTACAAGATTTATGAATGCAGAAGGTTGCTACAGGTTAAAATGGCTCCAAGGGCAAGACTaGCTATCAGCGCGTTGGGGC +
Preference number: 4 (lower is better)
Translates to: GNMITRFMNAEGCYRLKWLQGQD*LSARWG
Trigger: GCCCCAACGCGCTGATAGCCAGTCTTGCCCTTGGAG...CCATTTTAACCTGTAGCAACCTTCTGCATTCATAAATCTTGTAATCATGTTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp ATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTTTGGAAAGCATTTCTTCTCGTGGTTCTTCCACTaGATGCTTGTTCCGTTCATG +
Preference number: 4 (lower is better)
Translates to: MLWVDKPVYPCGFGKHFFSWFFH*MLVPFM
Trigger: CATGAACGGAACAAGCATCCAGTGGAAGAACCACGA...GAAGAAATGCTTTCCAAAACCGCAAGGGTAGACTGGTTTATCCACCCACAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000511804.5
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp TATATTGCTAGTCCACAGCTCATCTGCTTTCACGCTGCCTCTTATATCCCATTTTTCATGCTGTCCTTATaGCTGCTCCGGTCTGTGTTG +
Preference number: 4 (lower is better)
Translates to: YIASPQLICFHAASYIPFFMLSL*LLRSVL
Trigger: CAACACAGACCGGAGCAGCCATAAGGACAGCATGAA...AAATGGGATATAAGAGGCAGCGTGAAAGCAGATGAGCTGTGGACTAGCAATATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp CCTAGATTTTACTCAGACTATGCACTTTGGCACAACTGCGGGGCACAATTATTATCTCCGAGAGGATTATaGGAGTACCGAGGAGTGCTT +
Preference number: 4 (lower is better)
Translates to: PRFYSDYALWHNCGAQLLSPRGL*EYRGVL
Trigger: AAGCACTCCTCGGTACTCCCATAATCCTCTCGGAGA...TAATAATTGTGCCCCGCAGTTGTGCCAAAGTGCATAGTCTGAGTAAAATCTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp ACATCTGGGAAAATGCCCAGCAAAAGTCACTGTGGGCCCTTTGAAATGGTGACATGCTACAGGTTAAAATaGACTGAGGCAGGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: TSGKMPSKSHCGPFEMVTCYRLK*TEAGCH
Trigger: ATGACAACCTGCCTCAGTCCATTTTAACCTGTAGCA...TGTCACCATTTCAAAGGGCCCACAGTGACTTTTGCTGGGCATTTTCCCAGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp TTATGGGCCACTGCCAACTCAGGGCCTTGGCTTCTGGCTCATTTCTACAAAGTTCATATGATGCGCCAGTaGAATAATAGATTTGACTGC +
Preference number: 4 (lower is better)
Translates to: LWATANSGPWLLAHFYKVHMMRQ*NNRFDC
Trigger: GCAGTCAAATCTATTATTCCACTGGCGCATCATATG...AACTTTGTAGAAATGAGCCAGAAGCCAAGGCCCTGAGTTGGCAGTGGCCCATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp AGAAGTACGATTCGTAGATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTCAGGGCCTTGGCTTCTaGCTCATTTCTACAAAGTTA +
Preference number: 4 (lower is better)
Translates to: RSTIRRCCGWINQSTLAVQGLGF*LISTKL
Trigger: TAACTTTGTAGAAATGAGCCAGAAGCCAAGGCCCTG...AACCGCAAGGGTAGACTGGTTTATCCACCCACAACATCTACGAATCGTACTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp AGTCATGAGGGTGTAGAAGATCGCAGTGCACACCAAGGGCATACAGAAATAGAATCTCAGGATTATCACTaGTTACACATCCAACCAGTG +
Preference number: 4 (lower is better)
Translates to: SHEGVEDRSAHQGHTEIESQDYH*LHIQPV
Trigger: CACTGGTTGGATGTGTAATCAGTGATAATCCTGAGA...TTCTATTTCTGTATGCCCTTGGTGTGCACTGCGATCTTCTACACCCTCATGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510697.5
CDS-3UTR TCA 90 bp CTGCTGTACTCACAGTCTGTAAACATCTGGGAAAATGCCCAGCAAAAGTCACTGTCTCAGGATTATCACTaGTTACACATCCAACCAGTG +
Preference number: 4 (lower is better)
Translates to: LLYSQSVNIWENAQQKSLSQDYH*LHIQPV
Trigger: CACTGGTTGGATGTGTAATCAGTGATAATCCTGAGA...CAGTGACTTTTGCTGGGCATTTTCCCAGATGTTTACAGACTGTGAGTACAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp TTGCAATTCAAGCAACTGGAACCTGATGTTATTTTACCTGTCCTAAAATATGGCGGAATCCCAATTCCCTaGACACGACTCCAGGAGGCA +
Preference number: 4 (lower is better)
Translates to: LQFKQLEPDVILPVLKYGGIPIP*TRLQEA
Trigger: TGCCTCCTGGAGTCGTGTTCAGGGAATTGGGATTCC...GCCATATTTTAGGACAGGTAAAATAACATCAGGTTCCAGTTGCTTGAATTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324300.10
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp ACATCTGGGAAAATGCCCAGCAAAAGTCACTGTGGGCCCTTTGAAATGGTGACAAATATACGGCTTAAATaGAGAGGGAACCAGCAAAGA +
Preference number: 4 (lower is better)
Translates to: TSGKMPSKSHCGPFEMVTNIRLK*RGNQQR
Trigger: TCTTTGCTGGTTCCCTCTTCATTTAAGCCGTATATT...TGTCACCATTTCAAAGGGCCCACAGTGACTTTTGCTGGGCATTTTCCCAGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp TTATTTTACACTTATGGGCCACTGCCAACTCAGGGCCTTGGCTTCTGGCTCATTAATATACGGCTTAAATaGAGAGGGAACCAGCAAAGA +
Preference number: 4 (lower is better)
Translates to: LFYTYGPLPTQGLGFWLINIRLK*RGNQQR
Trigger: TCTTTGCTGGTTCCCTCTTCATTTAAGCCGTATATT...AATGAGCCAGAAGCCAAGGCCCTGAGTTGGCAGTGGCCCATAAGTGTAAAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp CTGCTGTACTCACAGTCTGTAAACATCTGGGAAAATGCCCAGCAAAAGTCACTGGCAGCAGCAGAGGCATaGCTGGAAACAATTTTTAAA +
Preference number: 4 (lower is better)
Translates to: LLYSQSVNIWENAQQKSLAAAEA*LETIFK
Trigger: TTTAAAAATTGTTTCCAGTCATGCCTCTGCTGCTGC...CAGTGACTTTTGCTGGGCATTTTCCCAGATGTTTACAGACTGTGAGTACAGCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp AGAAGTACGATTCGTAGATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTGCAGCAGCAGAGGCATaGCTGGAAACAATTTTTAAA +
Preference number: 4 (lower is better)
Translates to: RSTIRRCCGWINQSTLAVAAAEA*LETIFK
Trigger: TTTAAAAATTGTTTCCAGTCATGCCTCTGCTGCTGC...AACCGCAAGGGTAGACTGGTTTATCCACCCACAACATCTACGAATCGTACTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000511804.5
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp TTATTTTACACTTATGGGCCACTGCCAACTCAGGGCCTTGGCTTCTGGCTCATTTCTAAAGTTTCATGGTaGCCAGTTCCCATTGAACAT +
Preference number: 4 (lower is better)
Translates to: LFYTYGPLPTQGLGFWLISKVSW*PVPIEH
Trigger: ATGTTCAATGGGAACTGGTCACCATGAAACTTTAGA...AATGAGCCAGAAGCCAAGGCCCTGAGTTGGCAGTGGCCCATAAGTGTAAAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp AGAAGTACGATTCGTAGATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTCTATATACAGTGCACTaGAAGTCTCAGGCAGAGTTA +
Preference number: 4 (lower is better)
Translates to: RSTIRRCCGWINQSTLAVLYTVH*KSQAEL
Trigger: TAACTCTGCCTGAGACTTTCAGTGCACTGTATATAG...AACCGCAAGGGTAGACTGGTTTATCCACCCACAACATCTACGAATCGTACTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp AGTACGATTCGTAGATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTTTGGAGTTAGGTTCATACTaGAAACCCCAAGAAGTGAAG +
Preference number: 4 (lower is better)
Translates to: STIRRCCGWINQSTLAVLELGSY*KPQEVK
Trigger: CTTCACTTCTTGGGGTTTTCAGTATGAACCTAACTC...CAAAACCGCAAGGGTAGACTGGTTTATCCACCCACAACATCTACGAATCGTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp AGAAGTACGATTCGTAGATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTCAAGCAACTGGAACCTaGTGTTATTTTACCTGTCCT +
Preference number: 4 (lower is better)
Translates to: RSTIRRCCGWINQSTLAVQATGT*CYFTCP
Trigger: AGGACAGGTAAAATAACATCAGGTTCCAGTTGCTTG...AACCGCAAGGGTAGACTGGTTTATCCACCCACAACATCTACGAATCGTACTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp ACATCTGGGAAAATGCCCAGCAAAAGTCACTGTGGGCCCTTTGAAATGGTGACACTCTTATTGCACTTGTaGTGCTTTTACACCTTCACT +
Preference number: 4 (lower is better)
Translates to: TSGKMPSKSHCGPFEMVTLLLHL*CFYTFT
Trigger: AGTGAAGGTGTAAAAGCAGCACAAGTGCAATAAGAG...TGTCACCATTTCAAAGGGCCCACAGTGACTTTTGCTGGGCATTTTCCCAGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp TTATTTTACACTTATGGGCCACTGCCAACTCAGGGCCTTGGCTTCTGGCTCATTCTCTTATTGCACTTGTaGTGCTTTTACACCTTCACT +
Preference number: 4 (lower is better)
Translates to: LFYTYGPLPTQGLGFWLILLLHL*CFYTFT
Trigger: AGTGAAGGTGTAAAAGCAGCACAAGTGCAATAAGAG...AATGAGCCAGAAGCCAAGGCCCTGAGTTGGCAGTGGCCCATAAGTGTAAAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp TTATGGGCCACTGCCAACTCAGGGCCTTGGCTTCTGGCTCATTTCTACAAAGTTAGCATACAGGTTTTATaGTGTTCACCCCTATATTCA +
Preference number: 4 (lower is better)
Translates to: LWATANSGPWLLAHFYKVSIQVL*CSPLYS
Trigger: TGAATATAGGGGTGAACAGCATAAAACCTGTATGCT...AACTTTGTAGAAATGAGCCAGAAGCCAAGGCCCTGAGTTGGCAGTGGCCCATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324300.10
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp TATATTGCTAGTCCACAGCTCATCTGCTTTCACGCTGCCTCTTATATCCCATTTTGTAGAAGATCGCAGTaGACACCAAGGGCATACAGA +
Preference number: 4 (lower is better)
Translates to: YIASPQLICFHAASYIPFCRRSQ*TPRAYR
Trigger: TCTGTATGCCCTTGGTGTGCACTGCGATCTTCTACA...AAATGGGATATAAGAGGCAGCGTGAAAGCAGATGAGCTGTGGACTAGCAATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp ATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTTTGGAAAGCATTTCTTCGCAGAAAACTGTTTTTaGCACTTCTCGACGCTGCTT +
Preference number: 4 (lower is better)
Translates to: MLWVDKPVYPCGFGKHFFAENCF*HFSTLL
Trigger: AAGCAGCGTCGAGAAGTGGCAAAAACAGTTTTCTGC...GAAGAAATGCTTTCCAAAACCGCAAGGGTAGACTGGTTTATCCACCCACAACAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000511804.5
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp AGAAGTACGATTCGTAGATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTAAACCAGTCTACCCTTaGGGTTTTGGAAAGCATTTC +
Preference number: 4 (lower is better)
Translates to: RSTIRRCCGWINQSTLAVKPVYP*GFGKHF
Trigger: GAAATGCTTTCCAAAACCGCAAGGGTAGACTGGTTT...AACCGCAAGGGTAGACTGGTTTATCCACCCACAACATCTACGAATCGTACTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000511804.5
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp AGTACGATTCGTAGATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTTTGGACTTCTATATACAGTaGACTGAAAGTCTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: STIRRCCGWINQSTLAVLDFYIQ*TESLRQ
Trigger: CTGCCTGAGACTTTCAGTGCACTGTATATAGAAGTC...CAAAACCGCAAGGGTAGACTGGTTTATCCACCCACAACATCTACGAATCGTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp CTGCTGTACTCACAGTCTGTAAACATCTGGGAAAATGCCCAGCAAAAGTCACTGGACTTCTATATACAGTaGACTGAAAGTCTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: LLYSQSVNIWENAQQKSLDFYIQ*TESLRQ
Trigger: CTGCCTGAGACTTTCAGTGCACTGTATATAGAAGTC...CAGTGACTTTTGCTGGGCATTTTCCCAGATGTTTACAGACTGTGAGTACAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp AATCACCTAGATTTTACTCAGACTATGCACTTTGGCACAACTGCGGGGCACAATGCACTTTGGCACAACTaGGGGGCACAATTATTAGAT +
Preference number: 4 (lower is better)
Translates to: NHLDFTQTMHFGTTAGHNALWHN*GAQLLD
Trigger: ATCTAATAATTGTGCCCCGCAGTTGTGCCAAAGTGC...ATTGTGCCCCGCAGTTGTGCCAAAGTGCATAGTCTGAGTAAAATCTAGGTGATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp CTGCTGTACTCACAGTCTGTAAACATCTGGGAAAATGCCCAGCAAAAGTCACTGATTTTACTCAGACTATaGACTTTGGCACAACTGCGG +
Preference number: 4 (lower is better)
Translates to: LLYSQSVNIWENAQQKSLILLRL*TLAQLR
Trigger: CCGCAGTTGTGCCAAAGTGCATAGTCTGAGTAAAAT...CAGTGACTTTTGCTGGGCATTTTCCCAGATGTTTACAGACTGTGAGTACAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp CTGTACTCACAGTCTGTAAACATCTGGGAAAATGCCCAGCAAAAGTCACTGTGGATTTTACTCAGACTATaGACTTTGGCACAACTGCGG +
Preference number: 4 (lower is better)
Translates to: LYSQSVNIWENAQQKSLWILLRL*TLAQLR
Trigger: CCGCAGTTGTGCCAAAGTGCATAGTCTGAGTAAAAT...CCACAGTGACTTTTGCTGGGCATTTTCCCAGATGTTTACAGACTGTGAGTACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp AGTACGATTCGTAGATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTTTGCATCTGCTTTCACGCTaGCTCTTATATCCCATTTGT +
Preference number: 4 (lower is better)
Translates to: STIRRCCGWINQSTLAVLHLLSR*LLYPIC
Trigger: ACAAATGGGATATAAGAGGCAGCGTGAAAGCAGATG...CAAAACCGCAAGGGTAGACTGGTTTATCCACCCACAACATCTACGAATCGTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp TATATTGCTAGTCCACAGCTCATCTGCTTTCACGCTGCCTCTTATATCCCATTTAGTCCACAGCTCATCTaGTTTCACGCTGCCTCTTAT +
Preference number: 4 (lower is better)
Translates to: YIASPQLICFHAASYIPFSPQLI*FHAASY
Trigger: ATAAGAGGCAGCGTGAAAGCAGATGAGCTGTGGACT...AAATGGGATATAAGAGGCAGCGTGAAAGCAGATGAGCTGTGGACTAGCAATATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp ATTACAAGATTTATGAATGCAGAAGGTTGCTACAGGTTAAAATGGACTGAGGCAACACTTATGGGCCACTaGCAACTCAGGGCCTTGGCT +
Preference number: 4 (lower is better)
Translates to: ITRFMNAEGCYRLKWTEATLMGH*QLRALA
Trigger: AGCCAAGGCCCTGAGTTGGCAGTGGCCCATAAGTGT...TGCCTCAGTCCATTTTAACCTGTAGCAACCTTCTGCATTCATAAATCTTGTAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp TATATTGCTAGTCCACAGCTCATCTGCTTTCACGCTGCCTCTTATATCCCATTTTCGTGGTTCTTCCACTaGATGCTTGTTCCGTTCATG +
Preference number: 4 (lower is better)
Translates to: YIASPQLICFHAASYIPFSWFFH*MLVPFM
Trigger: CATGAACGGAACAAGCATCCAGTGGAAGAACCACGA...AAATGGGATATAAGAGGCAGCGTGAAAGCAGATGAGCTGTGGACTAGCAATATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp AGTACGATTCGTAGATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTTTGTGCTACAGGTTAAAATaGACTGAGGCAGGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: STIRRCCGWINQSTLAVLCYRLK*TEAGCH
Trigger: ATGACAACCTGCCTCAGTCCATTTTAACCTGTAGCA...CAAAACCGCAAGGGTAGACTGGTTTATCCACCCACAACATCTACGAATCGTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp AGAAGTACGATTCGTAGATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTTGCTACAGGTTAAAATaGACTGAGGCAGGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: RSTIRRCCGWINQSTLAVCYRLK*TEAGCH
Trigger: ATGACAACCTGCCTCAGTCCATTTTAACCTGTAGCA...AACCGCAAGGGTAGACTGGTTTATCCACCCACAACATCTACGAATCGTACTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp TTATTTTACACTTATGGGCCACTGCCAACTCAGGGCCTTGGCTTCTGGCTCATTCATATGATGCGCCAGTaGAATAATAGATTTGACTGC +
Preference number: 4 (lower is better)
Translates to: LFYTYGPLPTQGLGFWLIHMMRQ*NNRFDC
Trigger: GCAGTCAAATCTATTATTCCACTGGCGCATCATATG...AATGAGCCAGAAGCCAAGGCCCTGAGTTGGCAGTGGCCCATAAGTGTAAAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp AATCACCTAGATTTTACTCAGACTATGCACTTTGGCACAACTGCGGGGCACAATCAGGGCCTTGGCTTCTaGCTCATTTCTACAAAGTTA +
Preference number: 4 (lower is better)
Translates to: NHLDFTQTMHFGTTAGHNQGLGF*LISTKL
Trigger: TAACTTTGTAGAAATGAGCCAGAAGCCAAGGCCCTG...ATTGTGCCCCGCAGTTGTGCCAAAGTGCATAGTCTGAGTAAAATCTAGGTGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp CACAGGAAACAATATGACCCCAAATACTGCTTTATCAAACCAACCAACCAAACAGCCAACTCAGGGCCTTaGCTTCTGGCTCATTTCTAC +
Preference number: 4 (lower is better)
Translates to: HRKQYDPKYCFIKPTNQTANSGP*LLAHFY
Trigger: GTAGAAATGAGCCAGAAGCCAAGGCCCTGAGTTGGC...TGTTTGGTTGGTTGGTTTGATAAAGCAGTATTTGGGGTCATATTGTTTCCTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp CTGTACTCACAGTCTGTAAACATCTGGGAAAATGCCCAGCAAAAGTCACTGTGGTTTATTTTACACTTATaGGCCACTGCCAACTCAGGG +
Preference number: 4 (lower is better)
Translates to: LYSQSVNIWENAQQKSLWFILHL*ATANSG
Trigger: CCCTGAGTTGGCAGTGGCCCATAAGTGTAAAATAAA...CCACAGTGACTTTTGCTGGGCATTTTCCCAGATGTTTACAGACTGTGAGTACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
3UTR CAA 72 bp TATTTTACACTTATGGGCCACTGCCAACTCAGGGCCTaGGCTTCTGGCTCATTTCTACAAAGTTACTTGTTG +
Preference number: 4 (lower is better)
Translates to: YFTLMGHCQLRA*ASGSFLQSYLL
Trigger: CAACAAGTAACTTTGTAGAAATGAGCCAGAAGCCAAGGCCCTGAGTTGGCAGTGGCCCATAAGTGTAAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp AGTACGATTCGTAGATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTTTGGTGAAATCATCCACATaGTTGCTTAGATTTGTGCTG +
Preference number: 4 (lower is better)
Translates to: STIRRCCGWINQSTLAVLVKSST*LLRFVL
Trigger: CAGCACAAATCTAAGCAATCATGTGGATGATTTCAC...CAAAACCGCAAGGGTAGACTGGTTTATCCACCCACAACATCTACGAATCGTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp TTGCAATTCAAGCAACTGGAACCTGATGTTATTTTACCTGTCCTAAAATATGGCACGCCAAAGTCATTGTaGTCAAAAGGCCAGCGCCCA +
Preference number: 4 (lower is better)
Translates to: LQFKQLEPDVILPVLKYGTPKSL*SKGQRP
Trigger: TGGGCGCTGGCCTTTTGATCACAATGACTTTGGCGT...GCCATATTTTAGGACAGGTAAAATAACATCAGGTTCCAGTTGCTTGAATTGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324300.10
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp ATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTTTGGAAAGCATTTCTTCGCAGCAGCAGAGGCATaGCTGGAAACAATTTTTAAA +
Preference number: 4 (lower is better)
Translates to: MLWVDKPVYPCGFGKHFFAAAEA*LETIFK
Trigger: TTTAAAAATTGTTTCCAGTCATGCCTCTGCTGCTGC...GAAGAAATGCTTTCCAAAACCGCAAGGGTAGACTGGTTTATCCACCCACAACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000511804.5
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp AGTACGATTCGTAGATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTTTGTCTAAAGTTTCATGGTaGCCAGTTCCCATTGAACAT +
Preference number: 4 (lower is better)
Translates to: STIRRCCGWINQSTLAVLSKVSW*PVPIEH
Trigger: ATGTTCAATGGGAACTGGTCACCATGAAACTTTAGA...CAAAACCGCAAGGGTAGACTGGTTTATCCACCCACAACATCTACGAATCGTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp AGTACGATTCGTAGATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTTTGCAAATAAAAGTGACTTaGGCCCATATTGTGTTTGGC +
Preference number: 4 (lower is better)
Translates to: STIRRCCGWINQSTLAVLQIKVT*AHIVFG
Trigger: GCCAAACACAATATGGGCTCAAGTCACTTTTATTTG...CAAAACCGCAAGGGTAGACTGGTTTATCCACCCACAACATCTACGAATCGTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp AATCACCTAGATTTTACTCAGACTATGCACTTTGGCACAACTGCGGGGCACAATCTATATACAGTGCACTaGAAGTCTCAGGCAGAGTTA +
Preference number: 4 (lower is better)
Translates to: NHLDFTQTMHFGTTAGHNLYTVH*KSQAEL
Trigger: TAACTCTGCCTGAGACTTTCAGTGCACTGTATATAG...ATTGTGCCCCGCAGTTGTGCCAAAGTGCATAGTCTGAGTAAAATCTAGGTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp AATCACCTAGATTTTACTCAGACTATGCACTTTGGCACAACTGCGGGGCACAATGAAAACCCCAAGAAGTaGAGAATCGTAAGTTCTGGT +
Preference number: 4 (lower is better)
Translates to: NHLDFTQTMHFGTTAGHNENPKK*RIVSSG
Trigger: ACCAGAACTTACGATTCTTCACTTCTTGGGGTTTTC...ATTGTGCCCCGCAGTTGTGCCAAAGTGCATAGTCTGAGTAAAATCTAGGTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp CCTAGATTTTACTCAGACTATGCACTTTGGCACAACTGCGGGGCACAATTATTACTGTCTGGCGAAGTCTaGAAGAAATATCAGACAACC +
Preference number: 4 (lower is better)
Translates to: PRFYSDYALWHNCGAQLLLSGEV*KKYQTT
Trigger: GGTTGTCTGATATTTCTTTCAGACTTCGCCAGACAG...TAATAATTGTGCCCCGCAGTTGTGCCAAAGTGCATAGTCTGAGTAAAATCTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp ATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTTTGGAAAGCATTTCTTCCAAGCAACTGGAACCTaGTGTTATTTTACCTGTCCT +
Preference number: 4 (lower is better)
Translates to: MLWVDKPVYPCGFGKHFFQATGT*CYFTCP
Trigger: AGGACAGGTAAAATAACATCAGGTTCCAGTTGCTTG...GAAGAAATGCTTTCCAAAACCGCAAGGGTAGACTGGTTTATCCACCCACAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp TATATTGCTAGTCCACAGCTCATCTGCTTTCACGCTGCCTCTTATATCCCATTTGCAGAAAACTGTTTTTaGCACTTCTCGACGCTGCTT +
Preference number: 4 (lower is better)
Translates to: YIASPQLICFHAASYIPFAENCF*HFSTLL
Trigger: AAGCAGCGTCGAGAAGTGGCAAAAACAGTTTTCTGC...AAATGGGATATAAGAGGCAGCGTGAAAGCAGATGAGCTGTGGACTAGCAATATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp CATCGGTTCTTGTCCATCTCGTTATACACAGTTTTCTTCAATATACGGCTTAAATGCTGTCCTTATGGCTaGTCCGGTCTGTGTTGTGGT +
Preference number: 4 (lower is better)
Translates to: HRFLSISLYTVFFNIRLKCCPYG*SGLCCG
Trigger: ACCACAACACAGACCGGAGCAGCCATAAGGACAGCA...TTTAAGCCGTATATTGAAGAAAACTGTGTATAACGAGATGGACAAGAACCGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510697.5
CDS-3UTR GCA 90 bp ATTACAAGATTTATGAATGCAGAAGGTTGCTACAGGTTAAAATGGACTGAGGCAAGGGTGGTCAGTTCATaGTGTCCTTATGGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: ITRFMNAEGCYRLKWTEARVVSS*CPYGCS
Trigger: GGAGCAGCCATAAGGACAGCATGAACTGACCACCCT...TGCCTCAGTCCATTTTAACCTGTAGCAACCTTCTGCATTCATAAATCTTGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp ATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTTTGGAAAGCATTTCTTCAAACCAGTCTACCCTTaGGGTTTTGGAAAGCATTTC +
Preference number: 4 (lower is better)
Translates to: MLWVDKPVYPCGFGKHFFKPVYP*GFGKHF
Trigger: GAAATGCTTTCCAAAACCGCAAGGGTAGACTGGTTT...GAAGAAATGCTTTCCAAAACCGCAAGGGTAGACTGGTTTATCCACCCACAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000511804.5
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp AATCACCTAGATTTTACTCAGACTATGCACTTTGGCACAACTGCGGGGCACAATGACTTCTATATACAGTaGACTGAAAGTCTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: NHLDFTQTMHFGTTAGHNDFYIQ*TESLRQ
Trigger: CTGCCTGAGACTTTCAGTGCACTGTATATAGAAGTC...ATTGTGCCCCGCAGTTGTGCCAAAGTGCATAGTCTGAGTAAAATCTAGGTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp TTATTTTACACTTATGGGCCACTGCCAACTCAGGGCCTTGGCTTCTGGCTCATTATGAATGCAGAAGGTTaGTACAGGTTAAAATGGACT +
Preference number: 4 (lower is better)
Translates to: LFYTYGPLPTQGLGFWLIMNAEG*YRLKWT
Trigger: AGTCCATTTTAACCTGTAGCAACCTTCTGCATTCAT...AATGAGCCAGAAGCCAAGGCCCTGAGTTGGCAGTGGCCCATAAGTGTAAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp AATCACCTAGATTTTACTCAGACTATGCACTTTGGCACAACTGCGGGGCACAATCATCTGCTTTCACGCTaGCTCTTATATCCCATTTGT +
Preference number: 4 (lower is better)
Translates to: NHLDFTQTMHFGTTAGHNHLLSR*LLYPIC
Trigger: ACAAATGGGATATAAGAGGCAGCGTGAAAGCAGATG...ATTGTGCCCCGCAGTTGTGCCAAAGTGCATAGTCTGAGTAAAATCTAGGTGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp ACATCTGGGAAAATGCCCAGCAAAAGTCACTGTGGGCCCTTTGAAATGGTGACATATGACCCCAAATACTaGTTTATCAAACCAACCAAC +
Preference number: 4 (lower is better)
Translates to: TSGKMPSKSHCGPFEMVTYDPKY*FIKPTN
Trigger: GTTGGTTGGTTTGATAAAGCAGTATTTGGGGTCATA...TGTCACCATTTCAAAGGGCCCACAGTGACTTTTGCTGGGCATTTTCCCAGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp ATTACAAGATTTATGAATGCAGAAGGTTGCTACAGGTTAAAATGGACTGAGGCATGCTTGTTCCGTTCATaGGGACCGAGGTCATCAGAC +
Preference number: 4 (lower is better)
Translates to: ITRFMNAEGCYRLKWTEACLFRS*GPRSSD
Trigger: GTCTGATGACCTCGGTCCCCATGAACGGAACAAGCA...TGCCTCAGTCCATTTTAACCTGTAGCAACCTTCTGCATTCATAAATCTTGTAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp TTGCAATTCAAGCAACTGGAACCTGATGTTATTTTACCTGTCCTAAAATATGGCTGCTTGTTCCGTTCATaGGGACCGAGGTCATCAGAC +
Preference number: 4 (lower is better)
Translates to: LQFKQLEPDVILPVLKYGCLFRS*GPRSSD
Trigger: GTCTGATGACCTCGGTCCCCATGAACGGAACAAGCA...GCCATATTTTAGGACAGGTAAAATAACATCAGGTTCCAGTTGCTTGAATTGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp TTATTTTACACTTATGGGCCACTGCCAACTCAGGGCCTTGGCTTCTGGCTCATTAAGAATCGTAAGTTCTaGTGGCATTTGTGGGTAATT +
Preference number: 4 (lower is better)
Translates to: LFYTYGPLPTQGLGFWLIKNRKF*WHLWVI
Trigger: AATTACCCACAAATGCCACCAGAACTTACGATTCTT...AATGAGCCAGAAGCCAAGGCCCTGAGTTGGCAGTGGCCCATAAGTGTAAAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp ACATCTGGGAAAATGCCCAGCAAAAGTCACTGTGGGCCCTTTGAAATGGTGACATATCAGCAATCTGTCTaGCGAAGTCTGAAAGAAATA +
Preference number: 4 (lower is better)
Translates to: TSGKMPSKSHCGPFEMVTYQQSV*RSLKEI
Trigger: TATTTCTTTCAGACTTCGCCAGACAGATTGCTGATA...TGTCACCATTTCAAAGGGCCCACAGTGACTTTTGCTGGGCATTTTCCCAGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp AGTACGATTCGTAGATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTTTGCATATGATGCGCCAGTaGAATAATAGATTTGACTGC +
Preference number: 4 (lower is better)
Translates to: STIRRCCGWINQSTLAVLHMMRQ*NNRFDC
Trigger: GCAGTCAAATCTATTATTCCACTGGCGCATCATATG...CAAAACCGCAAGGGTAGACTGGTTTATCCACCCACAACATCTACGAATCGTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp ATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTTTGGAAAGCATTTCTTCTTTATTTTACACTTATaGGCCACTGCCAACTCAGGG +
Preference number: 4 (lower is better)
Translates to: MLWVDKPVYPCGFGKHFFFILHL*ATANSG
Trigger: CCCTGAGTTGGCAGTGGCCCATAAGTGTAAAATAAA...GAAGAAATGCTTTCCAAAACCGCAAGGGTAGACTGGTTTATCCACCCACAACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp ATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTTTGGAAAGCATTTCTTCGTGAAATCATCCACATaGTTGCTTAGATTTGTGCTG +
Preference number: 4 (lower is better)
Translates to: MLWVDKPVYPCGFGKHFFVKSST*LLRFVL
Trigger: CAGCACAAATCTAAGCAATCATGTGGATGATTTCAC...GAAGAAATGCTTTCCAAAACCGCAAGGGTAGACTGGTTTATCCACCCACAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp ATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTTTGGAAAGCATTTCTTCGAACTCCATGAATTTTaGTGTGGCATTGAGCATACA +
Preference number: 4 (lower is better)
Translates to: MLWVDKPVYPCGFGKHFFELHEF*CGIEHT
Trigger: TGTATGCTCAATGCCACATCAAAATTCATGGAGTTC...GAAGAAATGCTTTCCAAAACCGCAAGGGTAGACTGGTTTATCCACCCACAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000511804.5
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp AATCACCTAGATTTTACTCAGACTATGCACTTTGGCACAACTGCGGGGCACAATGAACTCCATGAATTTTaGTGTGGCATTGAGCATACA +
Preference number: 4 (lower is better)
Translates to: NHLDFTQTMHFGTTAGHNELHEF*CGIEHT
Trigger: TGTATGCTCAATGCCACATCAAAATTCATGGAGTTC...ATTGTGCCCCGCAGTTGTGCCAAAGTGCATAGTCTGAGTAAAATCTAGGTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324300.10
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp ATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTTTGGAAAGCATTTCTTCAATATACGGCTTAAATaGAGAGGGAACCAGCAAAGA +
Preference number: 4 (lower is better)
Translates to: MLWVDKPVYPCGFGKHFFNIRLK*RGNQQR
Trigger: TCTTTGCTGGTTCCCTCTTCATTTAAGCCGTATATT...GAAGAAATGCTTTCCAAAACCGCAAGGGTAGACTGGTTTATCCACCCACAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000511804.5
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp AATCACCTAGATTTTACTCAGACTATGCACTTTGGCACAACTGCGGGGCACAATAATATACGGCTTAAATaGAGAGGGAACCAGCAAAGA +
Preference number: 4 (lower is better)
Translates to: NHLDFTQTMHFGTTAGHNNIRLK*RGNQQR
Trigger: TCTTTGCTGGTTCCCTCTTCATTTAAGCCGTATATT...ATTGTGCCCCGCAGTTGTGCCAAAGTGCATAGTCTGAGTAAAATCTAGGTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp AGAAGTACGATTCGTAGATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTTATGGGGTTTATACATaGATTCATGGTTGCCAAGTT +
Preference number: 4 (lower is better)
Translates to: RSTIRRCCGWINQSTLAVYGVYT*IHGCQV
Trigger: AACTTGGCAACCATGAATTCATGTATAAACCCCATA...AACCGCAAGGGTAGACTGGTTTATCCACCCACAACATCTACGAATCGTACTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000511804.5
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp AGTACGATTCGTAGATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTTTGTATGGGGTTTATACATaGATTCATGGTTGCCAAGTT +
Preference number: 4 (lower is better)
Translates to: STIRRCCGWINQSTLAVLYGVYT*IHGCQV
Trigger: AACTTGGCAACCATGAATTCATGTATAAACCCCATA...CAAAACCGCAAGGGTAGACTGGTTTATCCACCCACAACATCTACGAATCGTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000511804.5
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp AGTCATGAGGGTGTAGAAGATCGCAGTGCACACCAAGGGCATACAGAAATAGAATATGGGGTTTATACATaGATTCATGGTTGCCAAGTT +
Preference number: 4 (lower is better)
Translates to: SHEGVEDRSAHQGHTEIEYGVYT*IHGCQV
Trigger: AACTTGGCAACCATGAATTCATGTATAAACCCCATA...TTCTATTTCTGTATGCCCTTGGTGTGCACTGCGATCTTCTACACCCTCATGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510697.5
CDS-3UTR TCA 90 bp ATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTTTGGAAAGCATTTCTTCCAAATAAAAGTGACTTaGGCCCATATTGTGTTTGGC +
Preference number: 4 (lower is better)
Translates to: MLWVDKPVYPCGFGKHFFQIKVT*AHIVFG
Trigger: GCCAAACACAATATGGGCTCAAGTCACTTTTATTTG...GAAGAAATGCTTTCCAAAACCGCAAGGGTAGACTGGTTTATCCACCCACAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp CCTAGATTTTACTCAGACTATGCACTTTGGCACAACTGCGGGGCACAATTATTACTATATACAGTGCACTaGAAGTCTCAGGCAGAGTTA +
Preference number: 4 (lower is better)
Translates to: PRFYSDYALWHNCGAQLLLYTVH*KSQAEL
Trigger: TAACTCTGCCTGAGACTTTCAGTGCACTGTATATAG...TAATAATTGTGCCCCGCAGTTGTGCCAAAGTGCATAGTCTGAGTAAAATCTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp CCTAGATTTTACTCAGACTATGCACTTTGGCACAACTGCGGGGCACAATTATTAGAGTTAGGTTCATACTaGAAACCCCAAGAAGTGAAG +
Preference number: 4 (lower is better)
Translates to: PRFYSDYALWHNCGAQLLELGSY*KPQEVK
Trigger: CTTCACTTCTTGGGGTTTTCAGTATGAACCTAACTC...TAATAATTGTGCCCCGCAGTTGTGCCAAAGTGCATAGTCTGAGTAAAATCTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp GGTAACATGATTACAAGATTTATGAATGCAGAAGGTTGCTACAGGTTAAAATGGGGCCCTTTGAAATGGTaGCAATGTGGGAGGGAGATG +
Preference number: 4 (lower is better)
Translates to: GNMITRFMNAEGCYRLKWGPLKW*QCGREM
Trigger: CATCTCCCTCCCACATTGTCACCATTTCAAAGGGCC...CCATTTTAACCTGTAGCAACCTTCTGCATTCATAAATCTTGTAATCATGTTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp TATATTGCTAGTCCACAGCTCATCTGCTTTCACGCTGCCTCTTATATCCCATTTCAAGCAACTGGAACCTaGTGTTATTTTACCTGTCCT +
Preference number: 4 (lower is better)
Translates to: YIASPQLICFHAASYIPFQATGT*CYFTCP
Trigger: AGGACAGGTAAAATAACATCAGGTTCCAGTTGCTTG...AAATGGGATATAAGAGGCAGCGTGAAAGCAGATGAGCTGTGGACTAGCAATATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp CCTAGATTTTACTCAGACTATGCACTTTGGCACAACTGCGGGGCACAATTATTACAAGCAACTGGAACCTaGTGTTATTTTACCTGTCCT +
Preference number: 4 (lower is better)
Translates to: PRFYSDYALWHNCGAQLLQATGT*CYFTCP
Trigger: AGGACAGGTAAAATAACATCAGGTTCCAGTTGCTTG...TAATAATTGTGCCCCGCAGTTGTGCCAAAGTGCATAGTCTGAGTAAAATCTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp AGAAGTACGATTCGTAGATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTATATATCACTGCATATaGTGCGCCAGTGGAATAATA +
Preference number: 4 (lower is better)
Translates to: RSTIRRCCGWINQSTLAVIYHCI*CASGII
Trigger: TATTATTCCACTGGCGCATCATATGCAGTGATATAT...AACCGCAAGGGTAGACTGGTTTATCCACCCACAACATCTACGAATCGTACTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp AGTACGATTCGTAGATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTTTGATATATCACTGCATATaGTGCGCCAGTGGAATAATA +
Preference number: 4 (lower is better)
Translates to: STIRRCCGWINQSTLAVLIYHCI*CASGII
Trigger: TATTATTCCACTGGCGCATCATATGCAGTGATATAT...CAAAACCGCAAGGGTAGACTGGTTTATCCACCCACAACATCTACGAATCGTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp ACATCTGGGAAAATGCCCAGCAAAAGTCACTGTGGGCCCTTTGAAATGGTGACATTATTGCACTTGTGCTaGTTTTACACCTTCACTTTT +
Preference number: 4 (lower is better)
Translates to: TSGKMPSKSHCGPFEMVTLLHLC*FYTFTF
Trigger: AAAAGTGAAGGTGTAAAAGCAGCACAAGTGCAATAA...TGTCACCATTTCAAAGGGCCCACAGTGACTTTTGCTGGGCATTTTCCCAGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp ACATCTGGGAAAATGCCCAGCAAAAGTCACTGTGGGCCCTTTGAAATGGTGACAGATTGCTTAGATTTGTaGTGTATCTCTCAGGATTAT +
Preference number: 4 (lower is better)
Translates to: TSGKMPSKSHCGPFEMVTDCLDL*CISQDY
Trigger: ATAATCCTGAGAGATACAGCACAAATCTAAGCAATC...TGTCACCATTTCAAAGGGCCCACAGTGACTTTTGCTGGGCATTTTCCCAGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp GGTAACATGATTACAAGATTTATGAATGCAGAAGGTTGCTACAGGTTAAAATGGGATCCTGAGCAGAGTTaGATTCCCCACCATTCCCAC +
Preference number: 4 (lower is better)
Translates to: GNMITRFMNAEGCYRLKWDPEQS*IPHHSH
Trigger: GTGGGAATGGTGGGGAATGCAACTCTGCTCAGGATC...CCATTTTAACCTGTAGCAACCTTCTGCATTCATAAATCTTGTAATCATGTTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp AATCACCTAGATTTTACTCAGACTATGCACTTTGGCACAACTGCGGGGCACAATAAAAGGGGAACAGCTTaGAAAGAAATACGCCAAAGT +
Preference number: 4 (lower is better)
Translates to: NHLDFTQTMHFGTTAGHNKRGTA*KEIRQS
Trigger: ACTTTGGCGTATTTCTTTGCAAGCTGTTCCCCTTTT...ATTGTGCCCCGCAGTTGTGCCAAAGTGCATAGTCTGAGTAAAATCTAGGTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000324300.10
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp ATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTTTGGAAAGCATTTCTTCAAAAGGGGAACAGCTTaGAAAGAAATACGCCAAAGT +
Preference number: 4 (lower is better)
Translates to: MLWVDKPVYPCGFGKHFFKRGTA*KEIRQS
Trigger: ACTTTGGCGTATTTCTTTGCAAGCTGTTCCCCTTTT...GAAGAAATGCTTTCCAAAACCGCAAGGGTAGACTGGTTTATCCACCCACAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000511804.5
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp GGTAACATGATTACAAGATTTATGAATGCAGAAGGTTGCTACAGGTTAAAATGGCCCACCGAGGACTTCTaGAAAAAGGGGAACAGCTTG +
Preference number: 4 (lower is better)
Translates to: GNMITRFMNAEGCYRLKWPTEDF*KKGNSL
Trigger: CAAGCTGTTCCCCTTTTTGCAGAAGTCCTCGGTGGG...CCATTTTAACCTGTAGCAACCTTCTGCATTCATAAATCTTGTAATCATGTTACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324300.10
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp ATTACAAGATTTATGAATGCAGAAGGTTGCTACAGGTTAAAATGGACTGAGGCAACTCCAGGAGGCAACTaGTCTGTACCTGTCAACACT +
Preference number: 4 (lower is better)
Translates to: ITRFMNAEGCYRLKWTEATPGGN*SVPVNT
Trigger: AGTGTTGACAGGTACAGAGCAGTTGCCTCCTGGAGT...TGCCTCAGTCCATTTTAACCTGTAGCAACCTTCTGCATTCATAAATCTTGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324300.10
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp TTGCAATTCAAGCAACTGGAACCTGATGTTATTTTACCTGTCCTAAAATATGGCACTCCAGGAGGCAACTaGTCTGTACCTGTCAACACT +
Preference number: 4 (lower is better)
Translates to: LQFKQLEPDVILPVLKYGTPGGN*SVPVNT
Trigger: AGTGTTGACAGGTACAGAGCAGTTGCCTCCTGGAGT...GCCATATTTTAGGACAGGTAAAATAACATCAGGTTCCAGTTGCTTGAATTGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324300.10
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp CTGCTGTACTCACAGTCTGTAAACATCTGGGAAAATGCCCAGCAAAAGTCACTGAGCATACAGGTTTTATaGTGTTCACCCCTATATTCA +
Preference number: 4 (lower is better)
Translates to: LLYSQSVNIWENAQQKSLSIQVL*CSPLYS
Trigger: TGAATATAGGGGTGAACAGCATAAAACCTGTATGCT...CAGTGACTTTTGCTGGGCATTTTCCCAGATGTTTACAGACTGTGAGTACAGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000324300.10
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp GGTAACATGATTACAAGATTTATGAATGCAGAAGGTTGCTACAGGTTAAAATGGTGCTGTCCTTATGGCTaGTCCGGTCTGTGTTGTGGT +
Preference number: 4 (lower is better)
Translates to: GNMITRFMNAEGCYRLKWCCPYG*SGLCCG
Trigger: ACCACAACACAGACCGGAGCAGCCATAAGGACAGCA...CCATTTTAACCTGTAGCAACCTTCTGCATTCATAAATCTTGTAATCATGTTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp GGTAACATGATTACAAGATTTATGAATGCAGAAGGTTGCTACAGGTTAAAATGGAGGGTGGTCAGTTCATaGTGTCCTTATGGCTGCTCC +
Preference number: 4 (lower is better)
Translates to: GNMITRFMNAEGCYRLKWRVVSS*CPYGCS
Trigger: GGAGCAGCCATAAGGACAGCATGAACTGACCACCCT...CCATTTTAACCTGTAGCAACCTTCTGCATTCATAAATCTTGTAATCATGTTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp ACATCTGGGAAAATGCCCAGCAAAAGTCACTGTGGGCCCTTTGAAATGGTGACATACAAGATTTATGAATaGAGAAGGTTGCTACAGGTT +
Preference number: 4 (lower is better)
Translates to: TSGKMPSKSHCGPFEMVTYKIYE*RRLLQV
Trigger: AACCTGTAGCAACCTTCTGCATTCATAAATCTTGTA...TGTCACCATTTCAAAGGGCCCACAGTGACTTTTGCTGGGCATTTTCCCAGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp TTATTTTACACTTATGGGCCACTGCCAACTCAGGGCCTTGGCTTCTGGCTCATTTACAAGATTTATGAATaGAGAAGGTTGCTACAGGTT +
Preference number: 4 (lower is better)
Translates to: LFYTYGPLPTQGLGFWLIYKIYE*RRLLQV
Trigger: AACCTGTAGCAACCTTCTGCATTCATAAATCTTGTA...AATGAGCCAGAAGCCAAGGCCCTGAGTTGGCAGTGGCCCATAAGTGTAAAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp CCTAGATTTTACTCAGACTATGCACTTTGGCACAACTGCGGGGCACAATTATTACATCTGCTTTCACGCTaGCTCTTATATCCCATTTGT +
Preference number: 4 (lower is better)
Translates to: PRFYSDYALWHNCGAQLLHLLSR*LLYPIC
Trigger: ACAAATGGGATATAAGAGGCAGCGTGAAAGCAGATG...TAATAATTGTGCCCCGCAGTTGTGCCAAAGTGCATAGTCTGAGTAAAATCTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp AGTACGATTCGTAGATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTTTGTATGACCCCAAATACTaGTTTATCAAACCAACCAAC +
Preference number: 4 (lower is better)
Translates to: STIRRCCGWINQSTLAVLYDPKY*FIKPTN
Trigger: GTTGGTTGGTTTGATAAAGCAGTATTTGGGGTCATA...CAAAACCGCAAGGGTAGACTGGTTTATCCACCCACAACATCTACGAATCGTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp GGTAACATGATTACAAGATTTATGAATGCAGAAGGTTGCTACAGGTTAAAATGGACCTTCCAGCTATCCTaGGACGCGGCCACTAAAAAG +
Preference number: 4 (lower is better)
Translates to: GNMITRFMNAEGCYRLKWTFQLS*DAATKK
Trigger: CTTTTTAGTGGCCGCGTCCCAGGATAGCTGGAAGGT...CCATTTTAACCTGTAGCAACCTTCTGCATTCATAAATCTTGTAATCATGTTACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
CDS-3UTR CCA 90 bp CACAGGAAACAATATGACCCCAAATACTGCTTTATCAAACCAACCAACCAAACATCGTGGTTCTTCCACTaGATGCTTGTTCCGTTCATG +
Preference number: 4 (lower is better)
Translates to: HRKQYDPKYCFIKPTNQTSWFFH*MLVPFM
Trigger: CATGAACGGAACAAGCATCCAGTGGAAGAACCACGA...TGTTTGGTTGGTTGGTTTGATAAAGCAGTATTTGGGGTCATATTGTTTCCTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp AGAAGTACGATTCGTAGATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTAAGAATCGTAAGTTCTaGTGGCATTTGTGGGTAATT +
Preference number: 4 (lower is better)
Translates to: RSTIRRCCGWINQSTLAVKNRKF*WHLWVI
Trigger: AATTACCCACAAATGCCACCAGAACTTACGATTCTT...AACCGCAAGGGTAGACTGGTTTATCCACCCACAACATCTACGAATCGTACTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp TTGCAATTCAAGCAACTGGAACCTGATGTTATTTTACCTGTCCTAAAATATGGCAGGGAGATGTTGGGGTaGGGAGTTAGGTTCATACTG +
Preference number: 4 (lower is better)
Translates to: LQFKQLEPDVILPVLKYGREMLG*GVRFIL
Trigger: CAGTATGAACCTAACTCCCCACCCCAACATCTCCCT...GCCATATTTTAGGACAGGTAAAATAACATCAGGTTCCAGTTGCTTGAATTGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp ATTACAAGATTTATGAATGCAGAAGGTTGCTACAGGTTAAAATGGACTGAGGCAGAAATGGTGACAATGTaGGAGGGAGATGTTGGGGTG +
Preference number: 4 (lower is better)
Translates to: ITRFMNAEGCYRLKWTEAEMVTM*EGDVGV
Trigger: CACCCCAACATCTCCCTCCCACATTGTCACCATTTC...TGCCTCAGTCCATTTTAACCTGTAGCAACCTTCTGCATTCATAAATCTTGTAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp CTGTACTCACAGTCTGTAAACATCTGGGAAAATGCCCAGCAAAAGTCACTGTGGTATCAGCAATCTGTCTaGCGAAGTCTGAAAGAAATA +
Preference number: 4 (lower is better)
Translates to: LYSQSVNIWENAQQKSLWYQQSV*RSLKEI
Trigger: TATTTCTTTCAGACTTCGCCAGACAGATTGCTGATA...CCACAGTGACTTTTGCTGGGCATTTTCCCAGATGTTTACAGACTGTGAGTACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp ACATCTGGGAAAATGCCCAGCAAAAGTCACTGTGGGCCCTTTGAAATGGTGACAACCTGTCCTAAAATATaGCCCAACAAATTATCTTAC +
Preference number: 4 (lower is better)
Translates to: TSGKMPSKSHCGPFEMVTTCPKI*PNKLSY
Trigger: GTAAGATAATTTGTTGGGCCATATTTTAGGACAGGT...TGTCACCATTTCAAAGGGCCCACAGTGACTTTTGCTGGGCATTTTCCCAGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp TTATTTTACACTTATGGGCCACTGCCAACTCAGGGCCTTGGCTTCTGGCTCATTTGCAATTCAAGCAACTaGAACCTGATGTTATTTTAC +
Preference number: 4 (lower is better)
Translates to: LFYTYGPLPTQGLGFWLICNSSN*NLMLFY
Trigger: GTAAAATAACATCAGGTTCCAGTTGCTTGAATTGCA...AATGAGCCAGAAGCCAAGGCCCTGAGTTGGCAGTGGCCCATAAGTGTAAAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp AATCACCTAGATTTTACTCAGACTATGCACTTTGGCACAACTGCGGGGCACAATCATATGATGCGCCAGTaGAATAATAGATTTGACTGC +
Preference number: 4 (lower is better)
Translates to: NHLDFTQTMHFGTTAGHNHMMRQ*NNRFDC
Trigger: GCAGTCAAATCTATTATTCCACTGGCGCATCATATG...ATTGTGCCCCGCAGTTGTGCCAAAGTGCATAGTCTGAGTAAAATCTAGGTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp GGTAACATGATTACAAGATTTATGAATGCAGAAGGTTGCTACAGGTTAAAATGGGCCAACTCAGGGCCTTaGCTTCTGGCTCATTTCTAC +
Preference number: 4 (lower is better)
Translates to: GNMITRFMNAEGCYRLKWANSGP*LLAHFY
Trigger: GTAGAAATGAGCCAGAAGCCAAGGCCCTGAGTTGGC...CCATTTTAACCTGTAGCAACCTTCTGCATTCATAAATCTTGTAATCATGTTACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp ATTACAAGATTTATGAATGCAGAAGGTTGCTACAGGTTAAAATGGACTGAGGCAATTCAAAGGGTACCATaGCGAAGCCAATCGCTTCAG +
Preference number: 4 (lower is better)
Translates to: ITRFMNAEGCYRLKWTEAIQRVP*RSQSLQ
Trigger: CTGAAGCGATTGGCTTCGTCATGGTACCCTTTGAAT...TGCCTCAGTCCATTTTAACCTGTAGCAACCTTCTGCATTCATAAATCTTGTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324300.10
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp TTGCAATTCAAGCAACTGGAACCTGATGTTATTTTACCTGTCCTAAAATATGGCACATCTCACAAGTCATaGGGGTGTAGAAGATCGCAG +
Preference number: 4 (lower is better)
Translates to: LQFKQLEPDVILPVLKYGTSHKS*GCRRSQ
Trigger: CTGCGATCTTCTACACCCTCATGACTTGTGAGATGT...GCCATATTTTAGGACAGGTAAAATAACATCAGGTTCCAGTTGCTTGAATTGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp ATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTTTGGAAAGCATTTCTTCTATGGGGTTTATACATaGATTCATGGTTGCCAAGTT +
Preference number: 4 (lower is better)
Translates to: MLWVDKPVYPCGFGKHFFYGVYT*IHGCQV
Trigger: AACTTGGCAACCATGAATTCATGTATAAACCCCATA...GAAGAAATGCTTTCCAAAACCGCAAGGGTAGACTGGTTTATCCACCCACAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000511804.5
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp TTGCAATTCAAGCAACTGGAACCTGATGTTATTTTACCTGTCCTAAAATATGGCGTGTTGTGGTTGTTTTaGTCGTGGTTCTTCCACTGG +
Preference number: 4 (lower is better)
Translates to: LQFKQLEPDVILPVLKYGVLWLF*SWFFHW
Trigger: CCAGTGGAAGAACCACGATCAAAACAACCACAACAC...GCCATATTTTAGGACAGGTAAAATAACATCAGGTTCCAGTTGCTTGAATTGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp CTGCTGTACTCACAGTCTGTAAACATCTGGGAAAATGCCCAGCAAAAGTCACTGTTATTGCACTTGTGCTaGTTTTACACCTTCACTTTT +
Preference number: 4 (lower is better)
Translates to: LLYSQSVNIWENAQQKSLLLHLC*FYTFTF
Trigger: AAAAGTGAAGGTGTAAAAGCAGCACAAGTGCAATAA...CAGTGACTTTTGCTGGGCATTTTCCCAGATGTTTACAGACTGTGAGTACAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp AGAAGTACGATTCGTAGATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTTTATTGCACTTGTGCTaGTTTTACACCTTCACTTTT +
Preference number: 4 (lower is better)
Translates to: RSTIRRCCGWINQSTLAVLLHLC*FYTFTF
Trigger: AAAAGTGAAGGTGTAAAAGCAGCACAAGTGCAATAA...AACCGCAAGGGTAGACTGGTTTATCCACCCACAACATCTACGAATCGTACTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp ATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTTTGGAAAGCATTTCTTCAGCATACAGGTTTTATaGTGTTCACCCCTATATTCA +
Preference number: 4 (lower is better)
Translates to: MLWVDKPVYPCGFGKHFFSIQVL*CSPLYS
Trigger: TGAATATAGGGGTGAACAGCATAAAACCTGTATGCT...GAAGAAATGCTTTCCAAAACCGCAAGGGTAGACTGGTTTATCCACCCACAACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000511804.5
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp TTGCAATTCAAGCAACTGGAACCTGATGTTATTTTACCTGTCCTAAAATATGGCTGTAGAAGATCGCAGTaGACACCAAGGGCATACAGA +
Preference number: 4 (lower is better)
Translates to: LQFKQLEPDVILPVLKYGCRRSQ*TPRAYR
Trigger: TCTGTATGCCCTTGGTGTGCACTGCGATCTTCTACA...GCCATATTTTAGGACAGGTAAAATAACATCAGGTTCCAGTTGCTTGAATTGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp CACAGGAAACAATATGACCCCAAATACTGCTTTATCAAACCAACCAACCAAACAGCAGAAAACTGTTTTTaGCACTTCTCGACGCTGCTT +
Preference number: 4 (lower is better)
Translates to: HRKQYDPKYCFIKPTNQTAENCF*HFSTLL
Trigger: AAGCAGCGTCGAGAAGTGGCAAAAACAGTTTTCTGC...TGTTTGGTTGGTTGGTTTGATAAAGCAGTATTTGGGGTCATATTGTTTCCTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp GGTAACATGATTACAAGATTTATGAATGCAGAAGGTTGCTACAGGTTAAAATGGGGTTCTTCCACTGGATaGTTGTTCCGTTCATGGGGA +
Preference number: 4 (lower is better)
Translates to: GNMITRFMNAEGCYRLKWGSSTG*LFRSWG
Trigger: TCCCCATGAACGGAACAAGCATCCAGTGGAAGAACC...CCATTTTAACCTGTAGCAACCTTCTGCATTCATAAATCTTGTAATCATGTTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp CTGCTGTACTCACAGTCTGTAAACATCTGGGAAAATGCCCAGCAAAAGTCACTGTACAAGATTTATGAATaGAGAAGGTTGCTACAGGTT +
Preference number: 4 (lower is better)
Translates to: LLYSQSVNIWENAQQKSLYKIYE*RRLLQV
Trigger: AACCTGTAGCAACCTTCTGCATTCATAAATCTTGTA...CAGTGACTTTTGCTGGGCATTTTCCCAGATGTTTACAGACTGTGAGTACAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp TTGCAATTCAAGCAACTGGAACCTGATGTTATTTTACCTGTCCTAAAATATGGCAGTCCACAGCTCATCTaGTTTCACGCTGCCTCTTAT +
Preference number: 4 (lower is better)
Translates to: LQFKQLEPDVILPVLKYGSPQLI*FHAASY
Trigger: ATAAGAGGCAGCGTGAAAGCAGATGAGCTGTGGACT...GCCATATTTTAGGACAGGTAAAATAACATCAGGTTCCAGTTGCTTGAATTGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp CTGCTGTACTCACAGTCTGTAAACATCTGGGAAAATGCCCAGCAAAAGTCACTGAATCGTAAGTTCTGGTaGCATTTGTGGGTAATTATT +
Preference number: 4 (lower is better)
Translates to: LLYSQSVNIWENAQQKSLNRKFW*HLWVII
Trigger: AATAATTACCCACAAATGCCACCAGAACTTACGATT...CAGTGACTTTTGCTGGGCATTTTCCCAGATGTTTACAGACTGTGAGTACAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp AGTACGATTCGTAGATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTTTGAATCGTAAGTTCTGGTaGCATTTGTGGGTAATTATT +
Preference number: 4 (lower is better)
Translates to: STIRRCCGWINQSTLAVLNRKFW*HLWVII
Trigger: AATAATTACCCACAAATGCCACCAGAACTTACGATT...CAAAACCGCAAGGGTAGACTGGTTTATCCACCCACAACATCTACGAATCGTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp GGTAACATGATTACAAGATTTATGAATGCAGAAGGTTGCTACAGGTTAAAATGGTCAGACTATGCACTTTaGCACAACTGCGGGGCACAA +
Preference number: 4 (lower is better)
Translates to: GNMITRFMNAEGCYRLKWSDYAL*HNCGAQ
Trigger: TTGTGCCCCGCAGTTGTGCCAAAGTGCATAGTCTGA...CCATTTTAACCTGTAGCAACCTTCTGCATTCATAAATCTTGTAATCATGTTACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp CTGCTGTACTCACAGTCTGTAAACATCTGGGAAAATGCCCAGCAAAAGTCACTGAAATATCAGACAACCTaGCAATTTCATCACCACATT +
Preference number: 4 (lower is better)
Translates to: LLYSQSVNIWENAQQKSLKYQTT*QFHHHI
Trigger: AATGTGGTGATGAAATTGCCAGGTTGTCTGATATTT...CAGTGACTTTTGCTGGGCATTTTCCCAGATGTTTACAGACTGTGAGTACAGCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp AGAAGTACGATTCGTAGATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTACCTGTCCTAAAATATaGCCCAACAAATTATCTTAC +
Preference number: 4 (lower is better)
Translates to: RSTIRRCCGWINQSTLAVTCPKI*PNKLSY
Trigger: GTAAGATAATTTGTTGGGCCATATTTTAGGACAGGT...AACCGCAAGGGTAGACTGGTTTATCCACCCACAACATCTACGAATCGTACTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp AGTACGATTCGTAGATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTTTGACCTGTCCTAAAATATaGCCCAACAAATTATCTTAC +
Preference number: 4 (lower is better)
Translates to: STIRRCCGWINQSTLAVLTCPKI*PNKLSY
Trigger: GTAAGATAATTTGTTGGGCCATATTTTAGGACAGGT...CAAAACCGCAAGGGTAGACTGGTTTATCCACCCACAACATCTACGAATCGTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp CACAGGAAACAATATGACCCCAAATACTGCTTTATCAAACCAACCAACCAAACACAGGGCCTTGGCTTCTaGCTCATTTCTACAAAGTTA +
Preference number: 4 (lower is better)
Translates to: HRKQYDPKYCFIKPTNQTQGLGF*LISTKL
Trigger: TAACTTTGTAGAAATGAGCCAGAAGCCAAGGCCCTG...TGTTTGGTTGGTTGGTTTGATAAAGCAGTATTTGGGGTCATATTGTTTCCTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp GGTAACATGATTACAAGATTTATGAATGCAGAAGGTTGCTACAGGTTAAAATGGACATCTCACAAGTCATaGGGGTGTAGAAGATCGCAG +
Preference number: 4 (lower is better)
Translates to: GNMITRFMNAEGCYRLKWTSHKS*GCRRSQ
Trigger: CTGCGATCTTCTACACCCTCATGACTTGTGAGATGT...CCATTTTAACCTGTAGCAACCTTCTGCATTCATAAATCTTGTAATCATGTTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp TATATTGCTAGTCCACAGCTCATCTGCTTTCACGCTGCCTCTTATATCCCATTTTATGGGGTTTATACATaGATTCATGGTTGCCAAGTT +
Preference number: 4 (lower is better)
Translates to: YIASPQLICFHAASYIPFYGVYT*IHGCQV
Trigger: AACTTGGCAACCATGAATTCATGTATAAACCCCATA...AAATGGGATATAAGAGGCAGCGTGAAAGCAGATGAGCTGTGGACTAGCAATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp TTGCAATTCAAGCAACTGGAACCTGATGTTATTTTACCTGTCCTAAAATATGGCGCAGAAAACTGTTTTTaGCACTTCTCGACGCTGCTT +
Preference number: 4 (lower is better)
Translates to: LQFKQLEPDVILPVLKYGAENCF*HFSTLL
Trigger: AAGCAGCGTCGAGAAGTGGCAAAAACAGTTTTCTGC...GCCATATTTTAGGACAGGTAAAATAACATCAGGTTCCAGTTGCTTGAATTGCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp CCTAGATTTTACTCAGACTATGCACTTTGGCACAACTGCGGGGCACAATTATTAATGAATGCAGAAGGTTaGTACAGGTTAAAATGGACT +
Preference number: 4 (lower is better)
Translates to: PRFYSDYALWHNCGAQLLMNAEG*YRLKWT
Trigger: AGTCCATTTTAACCTGTAGCAACCTTCTGCATTCAT...TAATAATTGTGCCCCGCAGTTGTGCCAAAGTGCATAGTCTGAGTAAAATCTAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp TATATTGCTAGTCCACAGCTCATCTGCTTTCACGCTGCCTCTTATATCCCATTTATGAATGCAGAAGGTTaGTACAGGTTAAAATGGACT +
Preference number: 4 (lower is better)
Translates to: YIASPQLICFHAASYIPFMNAEG*YRLKWT
Trigger: AGTCCATTTTAACCTGTAGCAACCTTCTGCATTCAT...AAATGGGATATAAGAGGCAGCGTGAAAGCAGATGAGCTGTGGACTAGCAATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp CACAGGAAACAATATGACCCCAAATACTGCTTTATCAAACCAACCAACCAAACACATCTGCTTTCACGCTaGCTCTTATATCCCATTTGT +
Preference number: 4 (lower is better)
Translates to: HRKQYDPKYCFIKPTNQTHLLSR*LLYPIC
Trigger: ACAAATGGGATATAAGAGGCAGCGTGAAAGCAGATG...TGTTTGGTTGGTTGGTTTGATAAAGCAGTATTTGGGGTCATATTGTTTCCTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp CCTAGATTTTACTCAGACTATGCACTTTGGCACAACTGCGGGGCACAATTATTATATGACCCCAAATACTaGTTTATCAAACCAACCAAC +
Preference number: 4 (lower is better)
Translates to: PRFYSDYALWHNCGAQLLYDPKY*FIKPTN
Trigger: GTTGGTTGGTTTGATAAAGCAGTATTTGGGGTCATA...TAATAATTGTGCCCCGCAGTTGTGCCAAAGTGCATAGTCTGAGTAAAATCTAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp TATATTGCTAGTCCACAGCTCATCTGCTTTCACGCTGCCTCTTATATCCCATTTTATCAGCAATCTGTCTaGCGAAGTCTGAAAGAAATA +
Preference number: 4 (lower is better)
Translates to: YIASPQLICFHAASYIPFYQQSV*RSLKEI
Trigger: TATTTCTTTCAGACTTCGCCAGACAGATTGCTGATA...AAATGGGATATAAGAGGCAGCGTGAAAGCAGATGAGCTGTGGACTAGCAATATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp ATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTTTGGAAAGCATTTCTTCTGCAATTCAAGCAACTaGAACCTGATGTTATTTTAC +
Preference number: 4 (lower is better)
Translates to: MLWVDKPVYPCGFGKHFFCNSSN*NLMLFY
Trigger: GTAAAATAACATCAGGTTCCAGTTGCTTGAATTGCA...GAAGAAATGCTTTCCAAAACCGCAAGGGTAGACTGGTTTATCCACCCACAACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp TTGCAATTCAAGCAACTGGAACCTGATGTTATTTTACCTGTCCTAAAATATGGCCAGGGCCTTGGCTTCTaGCTCATTTCTACAAAGTTA +
Preference number: 4 (lower is better)
Translates to: LQFKQLEPDVILPVLKYGQGLGF*LISTKL
Trigger: TAACTTTGTAGAAATGAGCCAGAAGCCAAGGCCCTG...GCCATATTTTAGGACAGGTAAAATAACATCAGGTTCCAGTTGCTTGAATTGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp CACAGGAAACAATATGACCCCAAATACTGCTTTATCAAACCAACCAACCAAACATTTATTTTACACTTATaGGCCACTGCCAACTCAGGG +
Preference number: 4 (lower is better)
Translates to: HRKQYDPKYCFIKPTNQTFILHL*ATANSG
Trigger: CCCTGAGTTGGCAGTGGCCCATAAGTGTAAAATAAA...TGTTTGGTTGGTTGGTTTGATAAAGCAGTATTTGGGGTCATATTGTTTCCTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp ATTACAAGATTTATGAATGCAGAAGGTTGCTACAGGTTAAAATGGACTGAGGCATCTCAGGATTATCACTaGTTACACATCCAACCAGTG +
Preference number: 4 (lower is better)
Translates to: ITRFMNAEGCYRLKWTEASQDYH*LHIQPV
Trigger: CACTGGTTGGATGTGTAATCAGTGATAATCCTGAGA...TGCCTCAGTCCATTTTAACCTGTAGCAACCTTCTGCATTCATAAATCTTGTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp TTGCAATTCAAGCAACTGGAACCTGATGTTATTTTACCTGTCCTAAAATATGGCTCTCAGGATTATCACTaGTTACACATCCAACCAGTG +
Preference number: 4 (lower is better)
Translates to: LQFKQLEPDVILPVLKYGSQDYH*LHIQPV
Trigger: CACTGGTTGGATGTGTAATCAGTGATAATCCTGAGA...GCCATATTTTAGGACAGGTAAAATAACATCAGGTTCCAGTTGCTTGAATTGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp CACAGGAAACAATATGACCCCAAATACTGCTTTATCAAACCAACCAACCAAACATCTAAAGTTTCATGGTaGCCAGTTCCCATTGAACAT +
Preference number: 4 (lower is better)
Translates to: HRKQYDPKYCFIKPTNQTSKVSW*PVPIEH
Trigger: ATGTTCAATGGGAACTGGTCACCATGAAACTTTAGA...TGTTTGGTTGGTTGGTTTGATAAAGCAGTATTTGGGGTCATATTGTTTCCTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp TTGCAATTCAAGCAACTGGAACCTGATGTTATTTTACCTGTCCTAAAATATGGCGAGTTAGGTTCATACTaGAAACCCCAAGAAGTGAAG +
Preference number: 4 (lower is better)
Translates to: LQFKQLEPDVILPVLKYGELGSY*KPQEVK
Trigger: CTTCACTTCTTGGGGTTTTCAGTATGAACCTAACTC...GCCATATTTTAGGACAGGTAAAATAACATCAGGTTCCAGTTGCTTGAATTGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp GGTAACATGATTACAAGATTTATGAATGCAGAAGGTTGCTACAGGTTAAAATGGCTGTCTGGCGAAGTCTaGAAGAAATATCAGACAACC +
Preference number: 4 (lower is better)
Translates to: GNMITRFMNAEGCYRLKWLSGEV*KKYQTT
Trigger: GGTTGTCTGATATTTCTTTCAGACTTCGCCAGACAG...CCATTTTAACCTGTAGCAACCTTCTGCATTCATAAATCTTGTAATCATGTTACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp CACAGGAAACAATATGACCCCAAATACTGCTTTATCAAACCAACCAACCAAACACTCTTATTGCACTTGTaGTGCTTTTACACCTTCACT +
Preference number: 4 (lower is better)
Translates to: HRKQYDPKYCFIKPTNQTLLLHL*CFYTFT
Trigger: AGTGAAGGTGTAAAAGCAGCACAAGTGCAATAAGAG...TGTTTGGTTGGTTGGTTTGATAAAGCAGTATTTGGGGTCATATTGTTTCCTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp CACAGGAAACAATATGACCCCAAATACTGCTTTATCAAACCAACCAACCAAACAAAAAGGGGAACAGCTTaGAAAGAAATACGCCAAAGT +
Preference number: 4 (lower is better)
Translates to: HRKQYDPKYCFIKPTNQTKRGTA*KEIRQS
Trigger: ACTTTGGCGTATTTCTTTGCAAGCTGTTCCCCTTTT...TGTTTGGTTGGTTGGTTTGATAAAGCAGTATTTGGGGTCATATTGTTTCCTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000324300.10
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp ATTACAAGATTTATGAATGCAGAAGGTTGCTACAGGTTAAAATGGACTGAGGCAGACTTCTATATACAGTaGACTGAAAGTCTCAGGCAG +
Preference number: 4 (lower is better)
Translates to: ITRFMNAEGCYRLKWTEADFYIQ*TESLRQ
Trigger: CTGCCTGAGACTTTCAGTGCACTGTATATAGAAGTC...TGCCTCAGTCCATTTTAACCTGTAGCAACCTTCTGCATTCATAAATCTTGTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp TATATTGCTAGTCCACAGCTCATCTGCTTTCACGCTGCCTCTTATATCCCATTTAAATATCAGACAACCTaGCAATTTCATCACCACATT +
Preference number: 4 (lower is better)
Translates to: YIASPQLICFHAASYIPFKYQTT*QFHHHI
Trigger: AATGTGGTGATGAAATTGCCAGGTTGTCTGATATTT...AAATGGGATATAAGAGGCAGCGTGAAAGCAGATGAGCTGTGGACTAGCAATATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp ATTACAAGATTTATGAATGCAGAAGGTTGCTACAGGTTAAAATGGACTGAGGCATTTATTTTACACTTATaGGCCACTGCCAACTCAGGG +
Preference number: 4 (lower is better)
Translates to: ITRFMNAEGCYRLKWTEAFILHL*ATANSG
Trigger: CCCTGAGTTGGCAGTGGCCCATAAGTGTAAAATAAA...TGCCTCAGTCCATTTTAACCTGTAGCAACCTTCTGCATTCATAAATCTTGTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp GGTAACATGATTACAAGATTTATGAATGCAGAAGGTTGCTACAGGTTAAAATGGTCTCAGGATTATCACTaGTTACACATCCAACCAGTG +
Preference number: 4 (lower is better)
Translates to: GNMITRFMNAEGCYRLKWSQDYH*LHIQPV
Trigger: CACTGGTTGGATGTGTAATCAGTGATAATCCTGAGA...CCATTTTAACCTGTAGCAACCTTCTGCATTCATAAATCTTGTAATCATGTTACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp ATTACAAGATTTATGAATGCAGAAGGTTGCTACAGGTTAAAATGGACTGAGGCAGAACTCCATGAATTTTaGTGTGGCATTGAGCATACA +
Preference number: 4 (lower is better)
Translates to: ITRFMNAEGCYRLKWTEAELHEF*CGIEHT
Trigger: TGTATGCTCAATGCCACATCAAAATTCATGGAGTTC...TGCCTCAGTCCATTTTAACCTGTAGCAACCTTCTGCATTCATAAATCTTGTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324300.10
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp TTGCAATTCAAGCAACTGGAACCTGATGTTATTTTACCTGTCCTAAAATATGGCAATATACGGCTTAAATaGAGAGGGAACCAGCAAAGA +
Preference number: 4 (lower is better)
Translates to: LQFKQLEPDVILPVLKYGNIRLK*RGNQQR
Trigger: TCTTTGCTGGTTCCCTCTTCATTTAAGCCGTATATT...GCCATATTTTAGGACAGGTAAAATAACATCAGGTTCCAGTTGCTTGAATTGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp GGTAACATGATTACAAGATTTATGAATGCAGAAGGTTGCTACAGGTTAAAATGGGCAGCAGCAGAGGCATaGCTGGAAACAATTTTTAAA +
Preference number: 4 (lower is better)
Translates to: GNMITRFMNAEGCYRLKWAAAEA*LETIFK
Trigger: TTTAAAAATTGTTTCCAGTCATGCCTCTGCTGCTGC...CCATTTTAACCTGTAGCAACCTTCTGCATTCATAAATCTTGTAATCATGTTACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp GGTAACATGATTACAAGATTTATGAATGCAGAAGGTTGCTACAGGTTAAAATGGAAACCAGTCTACCCTTaGGGTTTTGGAAAGCATTTC +
Preference number: 4 (lower is better)
Translates to: GNMITRFMNAEGCYRLKWKPVYP*GFGKHF
Trigger: GAAATGCTTTCCAAAACCGCAAGGGTAGACTGGTTT...CCATTTTAACCTGTAGCAACCTTCTGCATTCATAAATCTTGTAATCATGTTACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp CACAGGAAACAATATGACCCCAAATACTGCTTTATCAAACCAACCAACCAAACATATGACCCCAAATACTaGTTTATCAAACCAACCAAC +
Preference number: 4 (lower is better)
Translates to: HRKQYDPKYCFIKPTNQTYDPKY*FIKPTN
Trigger: GTTGGTTGGTTTGATAAAGCAGTATTTGGGGTCATA...TGTTTGGTTGGTTGGTTTGATAAAGCAGTATTTGGGGTCATATTGTTTCCTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp GGTAACATGATTACAAGATTTATGAATGCAGAAGGTTGCTACAGGTTAAAATGGTGCTACAGGTTAAAATaGACTGAGGCAGGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: GNMITRFMNAEGCYRLKWCYRLK*TEAGCH
Trigger: ATGACAACCTGCCTCAGTCCATTTTAACCTGTAGCA...CCATTTTAACCTGTAGCAACCTTCTGCATTCATAAATCTTGTAATCATGTTACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR TCA 90 bp GGTAACATGATTACAAGATTTATGAATGCAGAAGGTTGCTACAGGTTAAAATGGGAACTCCATGAATTTTaGTGTGGCATTGAGCATACA +
Preference number: 4 (lower is better)
Translates to: GNMITRFMNAEGCYRLKWELHEF*CGIEHT
Trigger: TGTATGCTCAATGCCACATCAAAATTCATGGAGTTC...CCATTTTAACCTGTAGCAACCTTCTGCATTCATAAATCTTGTAATCATGTTACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324300.10
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp CACAGGAAACAATATGACCCCAAATACTGCTTTATCAAACCAACCAACCAAACATTATTGCACTTGTGCTaGTTTTACACCTTCACTTTT +
Preference number: 4 (lower is better)
Translates to: HRKQYDPKYCFIKPTNQTLLHLC*FYTFTF
Trigger: AAAAGTGAAGGTGTAAAAGCAGCACAAGTGCAATAA...TGTTTGGTTGGTTGGTTTGATAAAGCAGTATTTGGGGTCATATTGTTTCCTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp CACAGGAAACAATATGACCCCAAATACTGCTTTATCAAACCAACCAACCAAACAGATTGCTTAGATTTGTaGTGTATCTCTCAGGATTAT +
Preference number: 4 (lower is better)
Translates to: HRKQYDPKYCFIKPTNQTDCLDL*CISQDY
Trigger: ATAATCCTGAGAGATACAGCACAAATCTAAGCAATC...TGTTTGGTTGGTTGGTTTGATAAAGCAGTATTTGGGGTCATATTGTTTCCTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp ATTACAAGATTTATGAATGCAGAAGGTTGCTACAGGTTAAAATGGACTGAGGCAATGAATGCAGAAGGTTaGTACAGGTTAAAATGGACT +
Preference number: 4 (lower is better)
Translates to: ITRFMNAEGCYRLKWTEAMNAEG*YRLKWT
Trigger: AGTCCATTTTAACCTGTAGCAACCTTCTGCATTCAT...TGCCTCAGTCCATTTTAACCTGTAGCAACCTTCTGCATTCATAAATCTTGTAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp TTGCAATTCAAGCAACTGGAACCTGATGTTATTTTACCTGTCCTAAAATATGGCAAGAATCGTAAGTTCTaGTGGCATTTGTGGGTAATT +
Preference number: 4 (lower is better)
Translates to: LQFKQLEPDVILPVLKYGKNRKF*WHLWVI
Trigger: AATTACCCACAAATGCCACCAGAACTTACGATTCTT...GCCATATTTTAGGACAGGTAAAATAACATCAGGTTCCAGTTGCTTGAATTGCAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp CACAGGAAACAATATGACCCCAAATACTGCTTTATCAAACCAACCAACCAAACAAAATATCAGACAACCTaGCAATTTCATCACCACATT +
Preference number: 4 (lower is better)
Translates to: HRKQYDPKYCFIKPTNQTKYQTT*QFHHHI
Trigger: AATGTGGTGATGAAATTGCCAGGTTGTCTGATATTT...TGTTTGGTTGGTTGGTTTGATAAAGCAGTATTTGGGGTCATATTGTTTCCTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp CACAGGAAACAATATGACCCCAAATACTGCTTTATCAAACCAACCAACCAAACATGCAATTCAAGCAACTaGAACCTGATGTTATTTTAC +
Preference number: 4 (lower is better)
Translates to: HRKQYDPKYCFIKPTNQTCNSSN*NLMLFY
Trigger: GTAAAATAACATCAGGTTCCAGTTGCTTGAATTGCA...TGTTTGGTTGGTTGGTTTGATAAAGCAGTATTTGGGGTCATATTGTTTCCTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR GCA 90 bp ATTACAAGATTTATGAATGCAGAAGGTTGCTACAGGTTAAAATGGACTGAGGCAGATTGCTTAGATTTGTaGTGTATCTCTCAGGATTAT +
Preference number: 4 (lower is better)
Translates to: ITRFMNAEGCYRLKWTEADCLDL*CISQDY
Trigger: ATAATCCTGAGAGATACAGCACAAATCTAAGCAATC...TGCCTCAGTCCATTTTAACCTGTAGCAACCTTCTGCATTCATAAATCTTGTAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp TTGCAATTCAAGCAACTGGAACCTGATGTTATTTTACCTGTCCTAAAATATGGCAATCGTAAGTTCTGGTaGCATTTGTGGGTAATTATT +
Preference number: 4 (lower is better)
Translates to: LQFKQLEPDVILPVLKYGNRKFW*HLWVII
Trigger: AATAATTACCCACAAATGCCACCAGAACTTACGATT...GCCATATTTTAGGACAGGTAAAATAACATCAGGTTCCAGTTGCTTGAATTGCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CCA 90 bp ATTACAAGATTTATGAATGCAGAAGGTTGCTACAGGTTAAAATGGACTGAGGCAACCTGTCCTAAAATATaGCCCAACAAATTATCTTAC +
Preference number: 4 (lower is better)
Translates to: ITRFMNAEGCYRLKWTEATCPKI*PNKLSY
Trigger: GTAAGATAATTTGTTGGGCCATATTTTAGGACAGGT...TGCCTCAGTCCATTTTAACCTGTAGCAACCTTCTGCATTCATAAATCTTGTAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS CCA 90 bp GTGGAGCTCGGCGTGCGCAGACAGCTGCCGGGTCCGCGCGGCGCCTaGGCCAGAGGAAGCCGGAGCCGGCGAGGGTGGGTGGCGCGGAGG +
Preference number: 5 (lower is better)
Translates to: VELGVRRQLPGPRGA*ARGSRSRRGWVARR
Trigger: CCTCCGCGCCACCCACCCTCGCCGGCTCCGGCTTCCTCTGGCCCAGGCGCCGCGCGGACCCGGCAGCTGTCTGCGCACGCCGAGCTCCAC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000511804.5
ENST00000648866.1
ENST00000651419.1
CDS CCA 90 bp GGAGGTCTCGCTGGGACCCCAATCCCCGGCGACGACCGGGTGGGATaGATGAAGCCTCTCCACCGCCTCTCCACAATCGTCAGACCAGCG +
Preference number: 5 (lower is better)
Translates to: GGLAGTPIPGDDRVG*MKPLHRLSTIVRPA
Trigger: CGCTGGTCTGACGATTGTGGAGAGGCGGTGGAGAGGCTTCATCCATCCCACCCGGTCGTCGCCGGGGATTGGGGTCCCAGCGAGACCTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000511804.5
ENST00000648866.1
ENST00000651419.1
CDS TCA 90 bp GTCTCGCTGGGACCCCAATCCCCGGCGACGACCGGGTGGGATGGATaGAGCCTCTCCACCGCCTCTCCACAATCGTCAGACCAGCGGGAT +
Preference number: 5 (lower is better)
Translates to: VSLGPQSPATTGWDG*SLSTASPQSSDQRD
Trigger: ATCCCGCTGGTCTGACGATTGTGGAGAGGCGGTGGAGAGGCTTCATCCATCCCACCCGGTCGTCGCCGGGGATTGGGGTCCCAGCGAGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000511804.5
ENST00000648866.1
ENST00000651419.1
CDS CCA 90 bp GTCCTCCCCGTCTCCTCCCAAAGCTCCAGACCTTCCACTCCACTCTaGGACCGCAAGAGCGTCCTAACCTTCCAGCTATCCTGGGACGCG +
Preference number: 5 (lower is better)
Translates to: VLPVSSQSSRPSTPL*DRKSVLTFQLSWDA
Trigger: CGCGTCCCAGGATAGCTGGAAGGTTAGGACGCTCTTGCGGTCCCAGAGTGGAGTGGAAGGTCTGGAGCTTTGGGAGGAGACGGGGAGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000511804.5
ENST00000648866.1
CDS TCA 90 bp ATGAAGCCTCTCCACCGCCTCTCCACAATCGTCAGACCAGCGGGATaGCTGTACGCGCGCGCGAGGGCTCGCACGAAAAAGAAAACTCCG +
Preference number: 5 (lower is better)
Translates to: MKPLHRLSTIVRPAG*LYARARARTKKKTP
Trigger: CGGAGTTTTCTTTTTCGTGCGAGCCCTCGCGCGCGCGTACAGTCATCCCGCTGGTCTGACGATTGTGGAGAGGCGGTGGAGAGGCTTCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000511804.5
ENST00000648866.1
CDS-3UTR CAA 90 bp GGATTATGGGAGTACCGAGGAGTGCTTCTAAGGGTGGTCAGTTCATGCTGTCCTCTAAGAGCGCAGAGGTaGAGGACGGTGATCCCCACC +
Preference number: 5 (lower is better)
Translates to: GLWEYRGVLLRVVSSCCPLRAQR*RTVIPT
Trigger: GGTGGGGATCACCGTCCTCAACCTCTGCGCTCTTAG...AGGACAGCATGAACTGACCACCCTTAGAAGCACTCCTCGGTACTCCCATAATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510697.5
CDS-3UTR CAA 90 bp TTATGGGCCACTGCCAACTCAGGGCCTTGGCTTCTGGCTCATTTCTACAAAGTTCTAAGAGCGCAGAGGTaGAGGACGGTGATCCCCACC +
Preference number: 5 (lower is better)
Translates to: LWATANSGPWLLAHFYKVLRAQR*RTVIPT
Trigger: GGTGGGGATCACCGTCCTCAACCTCTGCGCTCTTAG...AACTTTGTAGAAATGAGCCAGAAGCCAAGGCCCTGAGTTGGCAGTGGCCCATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000324300.10
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CAA 90 bp TCCGTTCATGGGGACCGAGGTCATCAGACTTTTGGACTGGTAACAGCAGCAGCATCTTCCACTGGATGCTaGTTCCGTTCATGGGGACCG +
Preference number: 5 (lower is better)
Translates to: SVHGDRGHQTFGLVTAAASSTGC*FRSWGP
Trigger: CGGTCCCCATGAACGGAACAAGCATCCAGTGGAAGA...TGCTGCTGCTGTTACCAGTCCAAAAGTCTGATGACCTCGGTCCCCATGAACGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000510697.5
CDS-3UTR CAA 90 bp CTGGATGCTTGTTCCGTTCATGGGGACCGAGGTCATCAGACTTTTGGACTGGTACTGGCTATCAGCGCGTaGGGGCCATTCCTCATACAT +
Preference number: 5 (lower is better)
Translates to: LDACSVHGDRGHQTFGLVLAISA*GPFLIH
Trigger: ATGTATGAGGAATGGCCCCAACGCGCTGATAGCCAG...TACCAGTCCAAAAGTCTGATGACCTCGGTCCCCATGAACGGAACAAGCATCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000510697.5
CDS-3UTR CAA 90 bp ACATCTGGGAAAATGCCCAGCAAAAGTCACTGTGGGCCCTTTGAAATGGTGACACTAAGAGCGCAGAGGTaGAGGACGGTGATCCCCACC +
Preference number: 5 (lower is better)
Translates to: TSGKMPSKSHCGPFEMVTLRAQR*RTVIPT
Trigger: GGTGGGGATCACCGTCCTCAACCTCTGCGCTCTTAG...TGTCACCATTTCAAAGGGCCCACAGTGACTTTTGCTGGGCATTTTCCCAGATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324300.10
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CAA 90 bp TTATGGGCCACTGCCAACTCAGGGCCTTGGCTTCTGGCTCATTTCTACAAAGTTCTGGCTATCAGCGCGTaGGGGCCATTCCTCATACAT +
Preference number: 5 (lower is better)
Translates to: LWATANSGPWLLAHFYKVLAISA*GPFLIH
Trigger: ATGTATGAGGAATGGCCCCAACGCGCTGATAGCCAG...AACTTTGTAGAAATGAGCCAGAAGCCAAGGCCCTGAGTTGGCAGTGGCCCATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CAA 90 bp CTGTACTCACAGTCTGTAAACATCTGGGAAAATGCCCAGCAAAAGTCACTGTGGCTAAGAGCGCAGAGGTaGAGGACGGTGATCCCCACC +
Preference number: 5 (lower is better)
Translates to: LYSQSVNIWENAQQKSLWLRAQR*RTVIPT
Trigger: GGTGGGGATCACCGTCCTCAACCTCTGCGCTCTTAG...CCACAGTGACTTTTGCTGGGCATTTTCCCAGATGTTTACAGACTGTGAGTACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324300.10
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CAA 90 bp AGAAGTACGATTCGTAGATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTCTAAGAGCGCAGAGGTaGAGGACGGTGATCCCCACC +
Preference number: 5 (lower is better)
Translates to: RSTIRRCCGWINQSTLAVLRAQR*RTVIPT
Trigger: GGTGGGGATCACCGTCCTCAACCTCTGCGCTCTTAG...AACCGCAAGGGTAGACTGGTTTATCCACCCACAACATCTACGAATCGTACTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000511804.5
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CAA 90 bp TTATGGGCCACTGCCAACTCAGGGCCTTGGCTTCTGGCTCATTTCTACAAAGTTTCTTCCACTGGATGCTaGTTCCGTTCATGGGGACCG +
Preference number: 5 (lower is better)
Translates to: LWATANSGPWLLAHFYKVSSTGC*FRSWGP
Trigger: CGGTCCCCATGAACGGAACAAGCATCCAGTGGAAGA...AACTTTGTAGAAATGAGCCAGAAGCCAAGGCCCTGAGTTGGCAGTGGCCCATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CAA 90 bp GAGAGGATTATGGGAGTACCGAGGAGTGCTTCTAAGGGTGGTCAGTTCATGCTGGGCAATAGTTGTGCATaGAGCCATTGCTGGGTAGGA +
Preference number: 5 (lower is better)
Translates to: ERIMGVPRSASKGGQFMLGNSCA*SHCWVG
Trigger: TCCTACCCAGCAATGGCTCAATGCACAACTATTGCC...CAGCATGAACTGACCACCCTTAGAAGCACTCCTCGGTACTCCCATAATCCTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510697.5
CDS TCA 90 bp ATGGAGACAATTTCAATGGCAGTTACCAAAGGAATCCCAATTCCCTaGACACGACTCCAGGAGGCAACTGCTCTGTACCCGGCCACAAGT +
Preference number: 5 (lower is better)
Translates to: METISMAVTKGIPIP*TRLQEATALYPATS
Trigger: ACTTGTGGCCGGGTACAGAGCAGTTGCCTCCTGGAGTCGTGTTCAGGGAATTGGGATTCCTTTGGTAACTGCCATTGAAATTGTCTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503721.1
CDS-3UTR CAA 90 bp TTATGGGCCACTGCCAACTCAGGGCCTTGGCTTCTGGCTCATTTCTACAAAGTTGGCAATAGTTGTGCATaGAGCCATTGCTGGGTAGGA +
Preference number: 5 (lower is better)
Translates to: LWATANSGPWLLAHFYKVGNSCA*SHCWVG
Trigger: TCCTACCCAGCAATGGCTCAATGCACAACTATTGCC...AACTTTGTAGAAATGAGCCAGAAGCCAAGGCCCTGAGTTGGCAGTGGCCCATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CAA 90 bp AGTACGATTCGTAGATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTTTGTCTTCCACTGGATGCTaGTTCCGTTCATGGGGACCG +
Preference number: 5 (lower is better)
Translates to: STIRRCCGWINQSTLAVLSSTGC*FRSWGP
Trigger: CGGTCCCCATGAACGGAACAAGCATCCAGTGGAAGA...CAAAACCGCAAGGGTAGACTGGTTTATCCACCCACAACATCTACGAATCGTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000511804.5
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CAA 90 bp TGGGAGTACCGAGGAGTGCTTCTAAGGGTGGTCAGTTCATGCTGTCCTTATGGCTGTGTTGTGGTTGTTTaGATCGTGGTTCTTCCACTG +
Preference number: 5 (lower is better)
Translates to: WEYRGVLLRVVSSCCPYGCVVVV*IVVLPL
Trigger: CAGTGGAAGAACCACGATCAAAACAACCACAACACA...GCCATAAGGACAGCATGAACTGACCACCCTTAGAAGCACTCCTCGGTACTCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510697.5
CDS-3UTR CAA 90 bp AGTACGATTCGTAGATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTTTGCTCAGACTATGCACTTaGGCACAACTGCGGGGCACA +
Preference number: 5 (lower is better)
Translates to: STIRRCCGWINQSTLAVLLRLCT*AQLRGT
Trigger: TGTGCCCCGCAGTTGTGCCAAAGTGCATAGTCTGAG...CAAAACCGCAAGGGTAGACTGGTTTATCCACCCACAACATCTACGAATCGTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CAA 90 bp AATCACCTAGATTTTACTCAGACTATGCACTTTGGCACAACTGCGGGGCACAATCTGGCTATCAGCGCGTaGGGGCCATTCCTCATACAT +
Preference number: 5 (lower is better)
Translates to: NHLDFTQTMHFGTTAGHNLAISA*GPFLIH
Trigger: ATGTATGAGGAATGGCCCCAACGCGCTGATAGCCAG...ATTGTGCCCCGCAGTTGTGCCAAAGTGCATAGTCTGAGTAAAATCTAGGTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CAA 90 bp ATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTTTGGAAAGCATTTCTTCCTGGCTATCAGCGCGTaGGGGCCATTCCTCATACAT +
Preference number: 5 (lower is better)
Translates to: MLWVDKPVYPCGFGKHFFLAISA*GPFLIH
Trigger: ATGTATGAGGAATGGCCCCAACGCGCTGATAGCCAG...GAAGAAATGCTTTCCAAAACCGCAAGGGTAGACTGGTTTATCCACCCACAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CAA 90 bp GAGGGTGTAGAAGATCGCAGTGCACACCAAGGGCATACAGAAATAGAACCCGAAGACCAAATTAGTGGGTaGATGAGTGGTAACCAGGAA +
Preference number: 5 (lower is better)
Translates to: EGVEDRSAHQGHTEIEPEDQISG*MSGNQE
Trigger: TTCCTGGTTACCACTCATCAACCCACTAATTTGGTC...TTCGGGTTCTATTTCTGTATGCCCTTGGTGTGCACTGCGATCTTCTACACCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510697.5
CDS-3UTR CAA 90 bp GAGGGTGTAGAAGATCGCAGTGCACACCAAGGGCATACAGAAATAGAACCCGAATTGTGCATTGAGCCATaGCTGGGTAGGACCAAATTA +
Preference number: 5 (lower is better)
Translates to: EGVEDRSAHQGHTEIEPELCIEP*LGRTKL
Trigger: TAATTTGGTCCTACCCAGCAATGGCTCAATGCACAA...TTCGGGTTCTATTTCTGTATGCCCTTGGTGTGCACTGCGATCTTCTACACCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510697.5
CDS-3UTR CAA 90 bp AGTACGATTCGTAGATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTTTGGGCAATAGTTGTGCATaGAGCCATTGCTGGGTAGGA +
Preference number: 5 (lower is better)
Translates to: STIRRCCGWINQSTLAVLGNSCA*SHCWVG
Trigger: TCCTACCCAGCAATGGCTCAATGCACAACTATTGCC...CAAAACCGCAAGGGTAGACTGGTTTATCCACCCACAACATCTACGAATCGTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CAA 90 bp ACATCTGGGAAAATGCCCAGCAAAAGTCACTGTGGGCCCTTTGAAATGGTGACAAGCAGAAAACTGTTTTaGCCACTTCTCGACGCTGCT +
Preference number: 5 (lower is better)
Translates to: TSGKMPSKSHCGPFEMVTSRKLF*PLLDAA
Trigger: AGCAGCGTCGAGAAGTGGCAAAAACAGTTTTCTGCT...TGTCACCATTTCAAAGGGCCCACAGTGACTTTTGCTGGGCATTTTCCCAGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CAA 90 bp TTATTTTACACTTATGGGCCACTGCCAACTCAGGGCCTTGGCTTCTGGCTCATTAGCAGAAAACTGTTTTaGCCACTTCTCGACGCTGCT +
Preference number: 5 (lower is better)
Translates to: LFYTYGPLPTQGLGFWLISRKLF*PLLDAA
Trigger: AGCAGCGTCGAGAAGTGGCAAAAACAGTTTTCTGCT...AATGAGCCAGAAGCCAAGGCCCTGAGTTGGCAGTGGCCCATAAGTGTAAAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CAA 90 bp CCTAGATTTTACTCAGACTATGCACTTTGGCACAACTGCGGGGCACAATTATTATCTTCCACTGGATGCTaGTTCCGTTCATGGGGACCG +
Preference number: 5 (lower is better)
Translates to: PRFYSDYALWHNCGAQLLSSTGC*FRSWGP
Trigger: CGGTCCCCATGAACGGAACAAGCATCCAGTGGAAGA...TAATAATTGTGCCCCGCAGTTGTGCCAAAGTGCATAGTCTGAGTAAAATCTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CAA 90 bp TTATGGGCCACTGCCAACTCAGGGCCTTGGCTTCTGGCTCATTTCTACAAAGTTTCTACCCTTGCGGTTTaGGAAAGCATTTCTTCTTGG +
Preference number: 5 (lower is better)
Translates to: LWATANSGPWLLAHFYKVSTLAV*ESISSW
Trigger: CCAAGAAGAAATGCTTTCCAAAACCGCAAGGGTAGA...AACTTTGTAGAAATGAGCCAGAAGCCAAGGCCCTGAGTTGGCAGTGGCCCATAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CAA 90 bp TATATTGCTAGTCCACAGCTCATCTGCTTTCACGCTGCCTCTTATATCCCATTTCTCAGACTATGCACTTaGGCACAACTGCGGGGCACA +
Preference number: 5 (lower is better)
Translates to: YIASPQLICFHAASYIPFLRLCT*AQLRGT
Trigger: TGTGCCCCGCAGTTGTGCCAAAGTGCATAGTCTGAG...AAATGGGATATAAGAGGCAGCGTGAAAGCAGATGAGCTGTGGACTAGCAATATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CAA 90 bp CCTAGATTTTACTCAGACTATGCACTTTGGCACAACTGCGGGGCACAATTATTACTCAGACTATGCACTTaGGCACAACTGCGGGGCACA +
Preference number: 5 (lower is better)
Translates to: PRFYSDYALWHNCGAQLLLRLCT*AQLRGT
Trigger: TGTGCCCCGCAGTTGTGCCAAAGTGCATAGTCTGAG...TAATAATTGTGCCCCGCAGTTGTGCCAAAGTGCATAGTCTGAGTAAAATCTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS TCA 90 bp ATGGAGACAATTTCAATGGCAGTTACCAAAGGAATCCCAATTCCCTaGACACGACTCCAGGAGGCAACTGCTCTGTACCTGTCAACACTA +
Preference number: 5 (lower is better)
Translates to: METISMAVTKGIPIP*TRLQEATALYLSTL
Trigger: TAGTGTTGACAGGTACAGAGCAGTTGCCTCCTGGAGTCGTGTTCAGGGAATTGGGATTCCTTTGGTAACTGCCATTGAAATTGTCTCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000511804.5
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CAA 90 bp ACATCTGGGAAAATGCCCAGCAAAAGTCACTGTGGGCCCTTTGAAATGGTGACATTGTGCATTGAGCCATaGCTGGGTAGGACCAAATTA +
Preference number: 5 (lower is better)
Translates to: TSGKMPSKSHCGPFEMVTLCIEP*LGRTKL
Trigger: TAATTTGGTCCTACCCAGCAATGGCTCAATGCACAA...TGTCACCATTTCAAAGGGCCCACAGTGACTTTTGCTGGGCATTTTCCCAGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CAA 90 bp AATCACCTAGATTTTACTCAGACTATGCACTTTGGCACAACTGCGGGGCACAATGGCAATAGTTGTGCATaGAGCCATTGCTGGGTAGGA +
Preference number: 5 (lower is better)
Translates to: NHLDFTQTMHFGTTAGHNGNSCA*SHCWVG
Trigger: TCCTACCCAGCAATGGCTCAATGCACAACTATTGCC...ATTGTGCCCCGCAGTTGTGCCAAAGTGCATAGTCTGAGTAAAATCTAGGTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CAA 90 bp CTGTACTCACAGTCTGTAAACATCTGGGAAAATGCCCAGCAAAAGTCACTGTGGAGCAGAAAACTGTTTTaGCCACTTCTCGACGCTGCT +
Preference number: 5 (lower is better)
Translates to: LYSQSVNIWENAQQKSLWSRKLF*PLLDAA
Trigger: AGCAGCGTCGAGAAGTGGCAAAAACAGTTTTCTGCT...CCACAGTGACTTTTGCTGGGCATTTTCCCAGATGTTTACAGACTGTGAGTACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CAA 90 bp GGATTATGGGAGTACCGAGGAGTGCTTCTAAGGGTGGTCAGTTCATGCTGTCCTAATTCACATCGGTTCTaGTCCATCTCGTTATACACA +
Preference number: 5 (lower is better)
Translates to: GLWEYRGVLLRVVSSCCPNSHRF*SISLYT
Trigger: TGTGTATAACGAGATGGACAAGAACCGATGTGAATT...AGGACAGCATGAACTGACCACCCTTAGAAGCACTCCTCGGTACTCCCATAATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510697.5
CDS-3UTR CAA 90 bp TTATGGGCCACTGCCAACTCAGGGCCTTGGCTTCTGGCTCATTTCTACAAAGTTCAGTACTTCTTAGCCTaGCAATTCAAGCAACTGGAA +
Preference number: 5 (lower is better)
Translates to: LWATANSGPWLLAHFYKVQYFLA*QFKQLE
Trigger: TTCCAGTTGCTTGAATTGCAAGGCTAAGAAGTACTG...AACTTTGTAGAAATGAGCCAGAAGCCAAGGCCCTGAGTTGGCAGTGGCCCATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS GCA 90 bp AGGATTATCACTGATTACACATCCAACCAGTGCCAGCCAAAAGGATaGCCTGAGGCAAAGGGTTTCCATCTTGAGGCAAATTTGAGGAAA +
Preference number: 5 (lower is better)
Translates to: RIITDYTSNQCQPKG*PEAKGFHLEANLRK
Trigger: TTTCCTCAAATTTGCCTCAAGATGGAAACCCTTTGCCTCAGGGCATCCTTTTGGCTGGCACTGGTTGGATGTGTAATCAGTGATAATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CAA 90 bp CTGCTGTACTCACAGTCTGTAAACATCTGGGAAAATGCCCAGCAAAAGTCACTGGACCAAATTAGTGGGTaGATGAGTGGTAACCAGGAA +
Preference number: 5 (lower is better)
Translates to: LLYSQSVNIWENAQQKSLDQISG*MSGNQE
Trigger: TTCCTGGTTACCACTCATCAACCCACTAATTTGGTC...CAGTGACTTTTGCTGGGCATTTTCCCAGATGTTTACAGACTGTGAGTACAGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CAA 90 bp CTGTACTCACAGTCTGTAAACATCTGGGAAAATGCCCAGCAAAAGTCACTGTGGTTGTGCATTGAGCCATaGCTGGGTAGGACCAAATTA +
Preference number: 5 (lower is better)
Translates to: LYSQSVNIWENAQQKSLWLCIEP*LGRTKL
Trigger: TAATTTGGTCCTACCCAGCAATGGCTCAATGCACAA...CCACAGTGACTTTTGCTGGGCATTTTCCCAGATGTTTACAGACTGTGAGTACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CAA 90 bp CACAGGAAACAATATGACCCCAAATACTGCTTTATCAAACCAACCAACCAAACACTGGCTATCAGCGCGTaGGGGCCATTCCTCATACAT +
Preference number: 5 (lower is better)
Translates to: HRKQYDPKYCFIKPTNQTLAISA*GPFLIH
Trigger: ATGTATGAGGAATGGCCCCAACGCGCTGATAGCCAG...TGTTTGGTTGGTTGGTTTGATAAAGCAGTATTTGGGGTCATATTGTTTCCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CAA 90 bp ATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTTTGGAAAGCATTTCTTCAGCAGAAAACTGTTTTaGCCACTTCTCGACGCTGCT +
Preference number: 5 (lower is better)
Translates to: MLWVDKPVYPCGFGKHFFSRKLF*PLLDAA
Trigger: AGCAGCGTCGAGAAGTGGCAAAAACAGTTTTCTGCT...GAAGAAATGCTTTCCAAAACCGCAAGGGTAGACTGGTTTATCCACCCACAACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000511804.5
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CAA 90 bp TTATGGGCCACTGCCAACTCAGGGCCTTGGCTTCTGGCTCATTTCTACAAAGTTAATTCACATCGGTTCTaGTCCATCTCGTTATACACA +
Preference number: 5 (lower is better)
Translates to: LWATANSGPWLLAHFYKVNSHRF*SISLYT
Trigger: TGTGTATAACGAGATGGACAAGAACCGATGTGAATT...AACTTTGTAGAAATGAGCCAGAAGCCAAGGCCCTGAGTTGGCAGTGGCCCATAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CAA 90 bp AGTACGATTCGTAGATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTTTGTGTGTTGTGGTTGTTTaGATCGTGGTTCTTCCACTG +
Preference number: 5 (lower is better)
Translates to: STIRRCCGWINQSTLAVLCVVVV*IVVLPL
Trigger: CAGTGGAAGAACCACGATCAAAACAACCACAACACA...CAAAACCGCAAGGGTAGACTGGTTTATCCACCCACAACATCTACGAATCGTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000511804.5
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CAA 90 bp TTATGGGCCACTGCCAACTCAGGGCCTTGGCTTCTGGCTCATTTCTACAAAGTTAAGCTAGCCATGTACTaGAAAGCTCTATTTTCATGC +
Preference number: 5 (lower is better)
Translates to: LWATANSGPWLLAHFYKVKLAMY*KALFSC
Trigger: GCATGAAAATAGAGCTTTCAAGTACATGGCTAGCTT...AACTTTGTAGAAATGAGCCAGAAGCCAAGGCCCTGAGTTGGCAGTGGCCCATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CAA 90 bp TTATGGGCCACTGCCAACTCAGGGCCTTGGCTTCTGGCTCATTTCTACAAAGTTTATGAATGCAGAAGGTaGCTACAGGTTAAAATGGAC +
Preference number: 5 (lower is better)
Translates to: LWATANSGPWLLAHFYKVYECRR*LQVKMD
Trigger: GTCCATTTTAACCTGTAGCAACCTTCTGCATTCATA...AACTTTGTAGAAATGAGCCAGAAGCCAAGGCCCTGAGTTGGCAGTGGCCCATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CAA 90 bp TTATTTTACACTTATGGGCCACTGCCAACTCAGGGCCTTGGCTTCTGGCTCATTCATGATTGCTTAGATTaGTGCTGTATCTCTCAGGAT +
Preference number: 5 (lower is better)
Translates to: LFYTYGPLPTQGLGFWLIHDCLD*CCISQD
Trigger: ATCCTGAGAGATACAGCACAAATCTAAGCAATCATG...AATGAGCCAGAAGCCAAGGCCCTGAGTTGGCAGTGGCCCATAAGTGTAAAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CAA 90 bp ATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTTTGGAAAGCATTTCTTCGACCAAATTAGTGGGTaGATGAGTGGTAACCAGGAA +
Preference number: 5 (lower is better)
Translates to: MLWVDKPVYPCGFGKHFFDQISG*MSGNQE
Trigger: TTCCTGGTTACCACTCATCAACCCACTAATTTGGTC...GAAGAAATGCTTTCCAAAACCGCAAGGGTAGACTGGTTTATCCACCCACAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CAA 90 bp ACAACCAAGCAGAAAACTGTTTTTGCCACTTCTCGACGCTGCTTAAGATGTTCAAGCAGAAAACTGTTTTaGCCACTTCTCGACGCTGCT +
Preference number: 5 (lower is better)
Translates to: TTKQKTVFATSRRCLRCSSRKLF*PLLDAA
Trigger: AGCAGCGTCGAGAAGTGGCAAAAACAGTTTTCTGCT...TGAACATCTTAAGCAGCGTCGAGAAGTGGCAAAAACAGTTTTCTGCTTGGTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000510697.5
CDS-3UTR CAA 90 bp ATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTTTGGAAAGCATTTCTTCTGTGTTGTGGTTGTTTaGATCGTGGTTCTTCCACTG +
Preference number: 5 (lower is better)
Translates to: MLWVDKPVYPCGFGKHFFCVVVV*IVVLPL
Trigger: CAGTGGAAGAACCACGATCAAAACAACCACAACACA...GAAGAAATGCTTTCCAAAACCGCAAGGGTAGACTGGTTTATCCACCCACAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000511804.5
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CAA 90 bp ATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTTTGGAAAGCATTTCTTCTCTACCCTTGCGGTTTaGGAAAGCATTTCTTCTTGG +
Preference number: 5 (lower is better)
Translates to: MLWVDKPVYPCGFGKHFFSTLAV*ESISSW
Trigger: CCAAGAAGAAATGCTTTCCAAAACCGCAAGGGTAGA...GAAGAAATGCTTTCCAAAACCGCAAGGGTAGACTGGTTTATCCACCCACAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000511804.5
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CAA 90 bp ACATCTGGGAAAATGCCCAGCAAAAGTCACTGTGGGCCCTTTGAAATGGTGACAAAACAAAACCCTATATaGCTAGTCCACAGCTCATCT +
Preference number: 5 (lower is better)
Translates to: TSGKMPSKSHCGPFEMVTKQNPI*LVHSSS
Trigger: AGATGAGCTGTGGACTAGCAATATAGGGTTTTGTTT...TGTCACCATTTCAAAGGGCCCACAGTGACTTTTGCTGGGCATTTTCCCAGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CAA 90 bp CTGTACTCACAGTCTGTAAACATCTGGGAAAATGCCCAGCAAAAGTCACTGTGGCAGTACTTCTTAGCCTaGCAATTCAAGCAACTGGAA +
Preference number: 5 (lower is better)
Translates to: LYSQSVNIWENAQQKSLWQYFLA*QFKQLE
Trigger: TTCCAGTTGCTTGAATTGCAAGGCTAAGAAGTACTG...CCACAGTGACTTTTGCTGGGCATTTTCCCAGATGTTTACAGACTGTGAGTACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CAA 90 bp AGTACGATTCGTAGATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTTTGCAGTACTTCTTAGCCTaGCAATTCAAGCAACTGGAA +
Preference number: 5 (lower is better)
Translates to: STIRRCCGWINQSTLAVLQYFLA*QFKQLE
Trigger: TTCCAGTTGCTTGAATTGCAAGGCTAAGAAGTACTG...CAAAACCGCAAGGGTAGACTGGTTTATCCACCCACAACATCTACGAATCGTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS TCA 90 bp ATGGAGACAATTTCAATGGCAGTTACCAAAGGAATCCCAATTCCCTaGACACGACTCCAGGAGGCAACTGCTCTGTACCTTAAATACATT +
Preference number: 5 (lower is better)
Translates to: METISMAVTKGIPIP*TRLQEATALYLKYI
Trigger: AATGTATTTAAGGTACAGAGCAGTTGCCTCCTGGAGTCGTGTTCAGGGAATTGGGATTCCTTTGGTAACTGCCATTGAAATTGTCTCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514245.1
CDS-3UTR CAA 90 bp TATATTGCTAGTCCACAGCTCATCTGCTTTCACGCTGCCTCTTATATCCCATTTTTGTGCATTGAGCCATaGCTGGGTAGGACCAAATTA +
Preference number: 5 (lower is better)
Translates to: YIASPQLICFHAASYIPFLCIEP*LGRTKL
Trigger: TAATTTGGTCCTACCCAGCAATGGCTCAATGCACAA...AAATGGGATATAAGAGGCAGCGTGAAAGCAGATGAGCTGTGGACTAGCAATATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CAA 90 bp CTGCTGTACTCACAGTCTGTAAACATCTGGGAAAATGCCCAGCAAAAGTCACTGAGCAGCTTAAATACATaGATAGGGAGATCAATGACC +
Preference number: 5 (lower is better)
Translates to: LLYSQSVNIWENAQQKSLSSLNT*IGRSMT
Trigger: GGTCATTGATCTCCCTATCAATGTATTTAAGCTGCT...CAGTGACTTTTGCTGGGCATTTTCCCAGATGTTTACAGACTGTGAGTACAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324300.10
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CAA 90 bp CTGTACTCACAGTCTGTAAACATCTGGGAAAATGCCCAGCAAAAGTCACTGTGGAGCAGCTTAAATACATaGATAGGGAGATCAATGACC +
Preference number: 5 (lower is better)
Translates to: LYSQSVNIWENAQQKSLWSSLNT*IGRSMT
Trigger: GGTCATTGATCTCCCTATCAATGTATTTAAGCTGCT...CCACAGTGACTTTTGCTGGGCATTTTCCCAGATGTTTACAGACTGTGAGTACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324300.10
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CAA 90 bp AGTACGATTCGTAGATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTTTGAATTCACATCGGTTCTaGTCCATCTCGTTATACACA +
Preference number: 5 (lower is better)
Translates to: STIRRCCGWINQSTLAVLNSHRF*SISLYT
Trigger: TGTGTATAACGAGATGGACAAGAACCGATGTGAATT...CAAAACCGCAAGGGTAGACTGGTTTATCCACCCACAACATCTACGAATCGTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000511804.5
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CAA 90 bp AGAAGTACGATTCGTAGATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTAATTCACATCGGTTCTaGTCCATCTCGTTATACACA +
Preference number: 5 (lower is better)
Translates to: RSTIRRCCGWINQSTLAVNSHRF*SISLYT
Trigger: TGTGTATAACGAGATGGACAAGAACCGATGTGAATT...AACCGCAAGGGTAGACTGGTTTATCCACCCACAACATCTACGAATCGTACTTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000511804.5
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CAA 90 bp GGTAACATGATTACAAGATTTATGAATGCAGAAGGTTGCTACAGGTTAAAATGGTCTTCCACTGGATGCTaGTTCCGTTCATGGGGACCG +
Preference number: 5 (lower is better)
Translates to: GNMITRFMNAEGCYRLKWSSTGC*FRSWGP
Trigger: CGGTCCCCATGAACGGAACAAGCATCCAGTGGAAGA...CCATTTTAACCTGTAGCAACCTTCTGCATTCATAAATCTTGTAATCATGTTACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CAA 90 bp TATATTGCTAGTCCACAGCTCATCTGCTTTCACGCTGCCTCTTATATCCCATTTTCTACCCTTGCGGTTTaGGAAAGCATTTCTTCTTGG +
Preference number: 5 (lower is better)
Translates to: YIASPQLICFHAASYIPFSTLAV*ESISSW
Trigger: CCAAGAAGAAATGCTTTCCAAAACCGCAAGGGTAGA...AAATGGGATATAAGAGGCAGCGTGAAAGCAGATGAGCTGTGGACTAGCAATATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CAA 90 bp AGTACGATTCGTAGATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTTTGAAGCTAGCCATGTACTaGAAAGCTCTATTTTCATGC +
Preference number: 5 (lower is better)
Translates to: STIRRCCGWINQSTLAVLKLAMY*KALFSC
Trigger: GCATGAAAATAGAGCTTTCAAGTACATGGCTAGCTT...CAAAACCGCAAGGGTAGACTGGTTTATCCACCCACAACATCTACGAATCGTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CAA 90 bp ACATCTGGGAAAATGCCCAGCAAAAGTCACTGTGGGCCCTTTGAAATGGTGACAAAGTTCTGGTGGCATTaGTGGGTAATTATTTTTCAC +
Preference number: 5 (lower is better)
Translates to: TSGKMPSKSHCGPFEMVTKFWWH*WVIIFH
Trigger: GTGAAAAATAATTACCCACAAATGCCACCAGAACTT...TGTCACCATTTCAAAGGGCCCACAGTGACTTTTGCTGGGCATTTTCCCAGATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CAA 90 bp CTGTACTCACAGTCTGTAAACATCTGGGAAAATGCCCAGCAAAAGTCACTGTGGAAACAAAACCCTATATaGCTAGTCCACAGCTCATCT +
Preference number: 5 (lower is better)
Translates to: LYSQSVNIWENAQQKSLWKQNPI*LVHSSS
Trigger: AGATGAGCTGTGGACTAGCAATATAGGGTTTTGTTT...CCACAGTGACTTTTGCTGGGCATTTTCCCAGATGTTTACAGACTGTGAGTACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS TCA 90 bp CAAAAGGATGCCCTGAGGCAAAGGGTTTCCATCTTGAGGCAAATTTaGGGAAATATCTCTTATTGCACTTGTGCTGCTTTTACACCTTCA +
Preference number: 5 (lower is better)
Translates to: QKDALRQRVSILRQI*GNISYCTCAAFTPS
Trigger: TGAAGGTGTAAAAGCAGCACAAGTGCAATAAGAGATATTTCCTCAAATTTGCCTCAAGATGGAAACCCTTTGCCTCAGGGCATCCTTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS TCA 90 bp AGGAAGCTGAGCTCTGTGCCACGAAAAGTGGTGAAATCATCCACATaGTTGCTTAGATTTGTGCTGTATCTCTCAGGATTATCACTGATT +
Preference number: 5 (lower is better)
Translates to: RKLSSVPRKVVKSST*LLRFVLYLSGLSLI
Trigger: AATCAGTGATAATCCTGAGAGATACAGCACAAATCTAAGCAATCATGTGGATGATTTCACCACTTTTCGTGGCACAGAGCTCAGCTTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000506066.1
ENST00000510697.5
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CAA 90 bp AATCACCTAGATTTTACTCAGACTATGCACTTTGGCACAACTGCGGGGCACAATCATGATTGCTTAGATTaGTGCTGTATCTCTCAGGAT +
Preference number: 5 (lower is better)
Translates to: NHLDFTQTMHFGTTAGHNHDCLD*CCISQD
Trigger: ATCCTGAGAGATACAGCACAAATCTAAGCAATCATG...ATTGTGCCCCGCAGTTGTGCCAAAGTGCATAGTCTGAGTAAAATCTAGGTGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CAA 90 bp TTGCAATTCAAGCAACTGGAACCTGATGTTATTTTACCTGTCCTAAAATATGGCGGCAATAGTTGTGCATaGAGCCATTGCTGGGTAGGA +
Preference number: 5 (lower is better)
Translates to: LQFKQLEPDVILPVLKYGGNSCA*SHCWVG
Trigger: TCCTACCCAGCAATGGCTCAATGCACAACTATTGCC...GCCATATTTTAGGACAGGTAAAATAACATCAGGTTCCAGTTGCTTGAATTGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CAA 90 bp CTGTACTCACAGTCTGTAAACATCTGGGAAAATGCCCAGCAAAAGTCACTGTGGAATTTTGATGTGGCATaGAGCATACAGGTTTTATGC +
Preference number: 5 (lower is better)
Translates to: LYSQSVNIWENAQQKSLWNFDVA*SIQVLC
Trigger: GCATAAAACCTGTATGCTCAATGCCACATCAAAATT...CCACAGTGACTTTTGCTGGGCATTTTCCCAGATGTTTACAGACTGTGAGTACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000324300.10
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CAA 90 bp AGAAGTACGATTCGTAGATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTAATTTTGATGTGGCATaGAGCATACAGGTTTTATGC +
Preference number: 5 (lower is better)
Translates to: RSTIRRCCGWINQSTLAVNFDVA*SIQVLC
Trigger: GCATAAAACCTGTATGCTCAATGCCACATCAAAATT...AACCGCAAGGGTAGACTGGTTTATCCACCCACAACATCTACGAATCGTACTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000511804.5
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CAA 90 bp ATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTTTGGAAAGCATTTCTTCAATTCACATCGGTTCTaGTCCATCTCGTTATACACA +
Preference number: 5 (lower is better)
Translates to: MLWVDKPVYPCGFGKHFFNSHRF*SISLYT
Trigger: TGTGTATAACGAGATGGACAAGAACCGATGTGAATT...GAAGAAATGCTTTCCAAAACCGCAAGGGTAGACTGGTTTATCCACCCACAACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000511804.5
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CAA 90 bp AGTACGATTCGTAGATGTTGTGGGTGGATAAACCAGTCTACCCTTGCGGTTTTGAAGTTCTGGTGGCATTaGTGGGTAATTATTTTTCAC +
Preference number: 5 (lower is better)
Translates to: STIRRCCGWINQSTLAVLKFWWH*WVIIFH
Trigger: GTGAAAAATAATTACCCACAAATGCCACCAGAACTT...CAAAACCGCAAGGGTAGACTGGTTTATCCACCCACAACATCTACGAATCGTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CAA 90 bp CCTAGATTTTACTCAGACTATGCACTTTGGCACAACTGCGGGGCACAATTATTACAGTACTTCTTAGCCTaGCAATTCAAGCAACTGGAA +
Preference number: 5 (lower is better)
Translates to: PRFYSDYALWHNCGAQLLQYFLA*QFKQLE
Trigger: TTCCAGTTGCTTGAATTGCAAGGCTAAGAAGTACTG...TAATAATTGTGCCCCGCAGTTGTGCCAAAGTGCATAGTCTGAGTAAAATCTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CAA 90 bp ACAACCAAGCAGAAAACTGTTTTTGCCACTTCTCGACGCTGCTTAAGATGTTCAAGCAGCTTAAATACATaGATAGGGAGATCAATGACC +
Preference number: 5 (lower is better)
Translates to: TTKQKTVFATSRRCLRCSSSLNT*IGRSMT
Trigger: GGTCATTGATCTCCCTATCAATGTATTTAAGCTGCT...TGAACATCTTAAGCAGCGTCGAGAAGTGGCAAAAACAGTTTTCTGCTTGGTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510697.5
CDS-3UTR CAA 90 bp CCTAGATTTTACTCAGACTATGCACTTTGGCACAACTGCGGGGCACAATTATTAAATTCACATCGGTTCTaGTCCATCTCGTTATACACA +
Preference number: 5 (lower is better)
Translates to: PRFYSDYALWHNCGAQLLNSHRF*SISLYT
Trigger: TGTGTATAACGAGATGGACAAGAACCGATGTGAATT...TAATAATTGTGCCCCGCAGTTGTGCCAAAGTGCATAGTCTGAGTAAAATCTAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CAA 90 bp CACAGGAAACAATATGACCCCAAATACTGCTTTATCAAACCAACCAACCAAACATGTGTTGTGGTTGTTTaGATCGTGGTTCTTCCACTG +
Preference number: 5 (lower is better)
Translates to: HRKQYDPKYCFIKPTNQTCVVVV*IVVLPL
Trigger: CAGTGGAAGAACCACGATCAAAACAACCACAACACA...TGTTTGGTTGGTTGGTTTGATAAAGCAGTATTTGGGGTCATATTGTTTCCTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CAA 90 bp TATATTGCTAGTCCACAGCTCATCTGCTTTCACGCTGCCTCTTATATCCCATTTAAACAAAACCCTATATaGCTAGTCCACAGCTCATCT +
Preference number: 5 (lower is better)
Translates to: YIASPQLICFHAASYIPFKQNPI*LVHSSS
Trigger: AGATGAGCTGTGGACTAGCAATATAGGGTTTTGTTT...AAATGGGATATAAGAGGCAGCGTGAAAGCAGATGAGCTGTGGACTAGCAATATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CAA 90 bp TTGCAATTCAAGCAACTGGAACCTGATGTTATTTTACCTGTCCTAAAATATGGCGACCAAATTAGTGGGTaGATGAGTGGTAACCAGGAA +
Preference number: 5 (lower is better)
Translates to: LQFKQLEPDVILPVLKYGDQISG*MSGNQE
Trigger: TTCCTGGTTACCACTCATCAACCCACTAATTTGGTC...GCCATATTTTAGGACAGGTAAAATAACATCAGGTTCCAGTTGCTTGAATTGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CAA 90 bp GGTAACATGATTACAAGATTTATGAATGCAGAAGGTTGCTACAGGTTAAAATGGAGCAGAAAACTGTTTTaGCCACTTCTCGACGCTGCT +
Preference number: 5 (lower is better)
Translates to: GNMITRFMNAEGCYRLKWSRKLF*PLLDAA
Trigger: AGCAGCGTCGAGAAGTGGCAAAAACAGTTTTCTGCT...CCATTTTAACCTGTAGCAACCTTCTGCATTCATAAATCTTGTAATCATGTTACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CAA 90 bp ATTACAAGATTTATGAATGCAGAAGGTTGCTACAGGTTAAAATGGACTGAGGCATGTGTTGTGGTTGTTTaGATCGTGGTTCTTCCACTG +
Preference number: 5 (lower is better)
Translates to: ITRFMNAEGCYRLKWTEACVVVV*IVVLPL
Trigger: CAGTGGAAGAACCACGATCAAAACAACCACAACACA...TGCCTCAGTCCATTTTAACCTGTAGCAACCTTCTGCATTCATAAATCTTGTAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CAA 90 bp TATATTGCTAGTCCACAGCTCATCTGCTTTCACGCTGCCTCTTATATCCCATTTAAGTTCTGGTGGCATTaGTGGGTAATTATTTTTCAC +
Preference number: 5 (lower is better)
Translates to: YIASPQLICFHAASYIPFKFWWH*WVIIFH
Trigger: GTGAAAAATAATTACCCACAAATGCCACCAGAACTT...AAATGGGATATAAGAGGCAGCGTGAAAGCAGATGAGCTGTGGACTAGCAATATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CAA 90 bp CACAGGAAACAATATGACCCCAAATACTGCTTTATCAAACCAACCAACCAAACATATCTCTTATTGCACTaGTGCTGCTTTTACACCTTC +
Preference number: 5 (lower is better)
Translates to: HRKQYDPKYCFIKPTNQTYLLLH*CCFYTF
Trigger: GAAGGTGTAAAAGCAGCACAAGTGCAATAAGAGATA...TGTTTGGTTGGTTGGTTTGATAAAGCAGTATTTGGGGTCATATTGTTTCCTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CAA 90 bp GGTAACATGATTACAAGATTTATGAATGCAGAAGGTTGCTACAGGTTAAAATGGGACCAAATTAGTGGGTaGATGAGTGGTAACCAGGAA +
Preference number: 5 (lower is better)
Translates to: GNMITRFMNAEGCYRLKWDQISG*MSGNQE
Trigger: TTCCTGGTTACCACTCATCAACCCACTAATTTGGTC...CCATTTTAACCTGTAGCAACCTTCTGCATTCATAAATCTTGTAATCATGTTACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CAA 90 bp GGTAACATGATTACAAGATTTATGAATGCAGAAGGTTGCTACAGGTTAAAATGGTTGTGCATTGAGCCATaGCTGGGTAGGACCAAATTA +
Preference number: 5 (lower is better)
Translates to: GNMITRFMNAEGCYRLKWLCIEP*LGRTKL
Trigger: TAATTTGGTCCTACCCAGCAATGGCTCAATGCACAA...CCATTTTAACCTGTAGCAACCTTCTGCATTCATAAATCTTGTAATCATGTTACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CAA 90 bp CACAGGAAACAATATGACCCCAAATACTGCTTTATCAAACCAACCAACCAAACATATGAATGCAGAAGGTaGCTACAGGTTAAAATGGAC +
Preference number: 5 (lower is better)
Translates to: HRKQYDPKYCFIKPTNQTYECRR*LQVKMD
Trigger: GTCCATTTTAACCTGTAGCAACCTTCTGCATTCATA...TGTTTGGTTGGTTGGTTTGATAAAGCAGTATTTGGGGTCATATTGTTTCCTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CAA 90 bp ATTACAAGATTTATGAATGCAGAAGGTTGCTACAGGTTAAAATGGACTGAGGCATATCTCTTATTGCACTaGTGCTGCTTTTACACCTTC +
Preference number: 5 (lower is better)
Translates to: ITRFMNAEGCYRLKWTEAYLLLH*CCFYTF
Trigger: GAAGGTGTAAAAGCAGCACAAGTGCAATAAGAGATA...TGCCTCAGTCCATTTTAACCTGTAGCAACCTTCTGCATTCATAAATCTTGTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CAA 90 bp TTGCAATTCAAGCAACTGGAACCTGATGTTATTTTACCTGTCCTAAAATATGGCAGCAGCTTAAATACATaGATAGGGAGATCAATGACC +
Preference number: 5 (lower is better)
Translates to: LQFKQLEPDVILPVLKYGSSLNT*IGRSMT
Trigger: GGTCATTGATCTCCCTATCAATGTATTTAAGCTGCT...GCCATATTTTAGGACAGGTAAAATAACATCAGGTTCCAGTTGCTTGAATTGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000324300.10
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CAA 90 bp ATTACAAGATTTATGAATGCAGAAGGTTGCTACAGGTTAAAATGGACTGAGGCATATGAATGCAGAAGGTaGCTACAGGTTAAAATGGAC +
Preference number: 5 (lower is better)
Translates to: ITRFMNAEGCYRLKWTEAYECRR*LQVKMD
Trigger: GTCCATTTTAACCTGTAGCAACCTTCTGCATTCATA...TGCCTCAGTCCATTTTAACCTGTAGCAACCTTCTGCATTCATAAATCTTGTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CAA 90 bp GGTAACATGATTACAAGATTTATGAATGCAGAAGGTTGCTACAGGTTAAAATGGTATCTCTTATTGCACTaGTGCTGCTTTTACACCTTC +
Preference number: 5 (lower is better)
Translates to: GNMITRFMNAEGCYRLKWYLLLH*CCFYTF
Trigger: GAAGGTGTAAAAGCAGCACAAGTGCAATAAGAGATA...CCATTTTAACCTGTAGCAACCTTCTGCATTCATAAATCTTGTAATCATGTTACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CAA 90 bp GGTAACATGATTACAAGATTTATGAATGCAGAAGGTTGCTACAGGTTAAAATGGTATGAATGCAGAAGGTaGCTACAGGTTAAAATGGAC +
Preference number: 5 (lower is better)
Translates to: GNMITRFMNAEGCYRLKWYECRR*LQVKMD
Trigger: GTCCATTTTAACCTGTAGCAACCTTCTGCATTCATA...CCATTTTAACCTGTAGCAACCTTCTGCATTCATAAATCTTGTAATCATGTTACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CAA 90 bp GGTAACATGATTACAAGATTTATGAATGCAGAAGGTTGCTACAGGTTAAAATGGAAACAAAACCCTATATaGCTAGTCCACAGCTCATCT +
Preference number: 5 (lower is better)
Translates to: GNMITRFMNAEGCYRLKWKQNPI*LVHSSS
Trigger: AGATGAGCTGTGGACTAGCAATATAGGGTTTTGTTT...CCATTTTAACCTGTAGCAACCTTCTGCATTCATAAATCTTGTAATCATGTTACC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1
CDS-3UTR CAA 90 bp GGTAACATGATTACAAGATTTATGAATGCAGAAGGTTGCTACAGGTTAAAATGGAATTTTGATGTGGCATaGAGCATACAGGTTTTATGC +
Preference number: 5 (lower is better)
Translates to: GNMITRFMNAEGCYRLKWNFDVA*SIQVLC
Trigger: GCATAAAACCTGTATGCTCAATGCCACATCAAAATT...CCATTTTAACCTGTAGCAACCTTCTGCATTCATAAATCTTGTAATCATGTTACC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000324300.10
ENST00000648866.1
ENST00000651419.1
CDS CCA 72 bp GGCGTGCGCAGACAGCTGCCGGGTCCGCGCGGCGCCTaGGCCAGAGGAAGCCGGAGCCGGCGAGGGTGGGTG +
Preference number: 6 (lower is better)
Translates to: GVRRQLPGPRGA*ARGSRSRRGWV
Trigger: CACCCACCCTCGCCGGCTCCGGCTTCCTCTGGCCCAGGCGCCGCGCGGACCCGGCAGCTGTCTGCGCACGCC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000511804.5
ENST00000648866.1
ENST00000651419.1
CDS GCA 72 bp AAGGCCAGCGCCCAGCCAGCAGCGTGGAGCTCGGCGTaGGCAGACAGCTGCCGGGTCCGCGCGGCGCCTGGG +
Preference number: 6 (lower is better)
Translates to: KASAQPAAWSSA*ADSCRVRAAPG
Trigger: CCCAGGCGCCGCGCGGACCCGGCAGCTGTCTGCGCACGCCGAGCTCCACGCTGCTGGCTGGGCGCTGGCCTT
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000511804.5
CDS CCA 72 bp GCTGGGACCCCAATCCCCGGCGACGACCGGGTGGGATaGATGAAGCCTCTCCACCGCCTCTCCACAATCGTC +
Preference number: 6 (lower is better)
Translates to: AGTPIPGDDRVG*MKPLHRLSTIV
Trigger: GACGATTGTGGAGAGGCGGTGGAGAGGCTTCATCCATCCCACCCGGTCGTCGCCGGGGATTGGGGTCCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000511804.5
ENST00000648866.1
ENST00000651419.1
CDS TCA 72 bp GGACCCCAATCCCCGGCGACGACCGGGTGGGATGGATaGAGCCTCTCCACCGCCTCTCCACAATCGTCAGAC +
Preference number: 6 (lower is better)
Translates to: GPQSPATTGWDG*SLSTASPQSSD
Trigger: GTCTGACGATTGTGGAGAGGCGGTGGAGAGGCTTCATCCATCCCACCCGGTCGTCGCCGGGGATTGGGGTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000511804.5
ENST00000648866.1
ENST00000651419.1
CDS TCA 72 bp CTCCACCGCCTCTCCACAATCGTCAGACCAGCGGGATaGCTGTACGCGCGCGCGAGGGCTCGCACGAAAAAG +
Preference number: 6 (lower is better)
Translates to: LHRLSTIVRPAG*LYARARARTKK
Trigger: CTTTTTCGTGCGAGCCCTCGCGCGCGCGTACAGTCATCCCGCTGGTCTGACGATTGTGGAGAGGCGGTGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000511804.5
ENST00000648866.1
CDS CCA 72 bp TGGGACCGCAAGAGCGTCCTAACCTTCCAGCTATCCTaGGACGCGGCCACTAAAAAGCACAAAGCTGCCGCC +
Preference number: 6 (lower is better)
Translates to: WDRKSVLTFQLS*DAATKKHKAAA
Trigger: GGCGGCAGCTTTGTGCTTTTTAGTGGCCGCGTCCCAGGATAGCTGGAAGGTTAGGACGCTCTTGCGGTCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000324300.10
ENST00000358556.8
CDS CCA 72 bp GTCTCCTCCCAAAGCTCCAGACCTTCCACTCCACTCTaGGACCGCAAGAGCGTCCTAACCTTCCAGCTATCC +
Preference number: 6 (lower is better)
Translates to: VSSQSSRPSTPL*DRKSVLTFQLS
Trigger: GGATAGCTGGAAGGTTAGGACGCTCTTGCGGTCCCAGAGTGGAGTGGAAGGTCTGGAGCTTTGGGAGGAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000511804.5
ENST00000648866.1
CDS CAA 72 bp CCGGCCACAAGTGGGGCTTTTAAGAGTTCCACCCATTaGGAAATCAACTGCGTGGCAGGCCTGAGTCTGAGG +
Preference number: 6 (lower is better)
Translates to: PATSGAFKSSTH*EINCVAGLSLR
Trigger: CCTCAGACTCAGGCCTGCCACGCAGTTGATTTCCAAATGGGTGGAACTCTTAAAAGCCCCACTTGTGGCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503721.1
CDS CAA 72 bp ACTGCTCTGTACCTGTCAACACTAAGAGCGCAGAGGTaGAGGACGGTGATCCCCACCGAGGACTTCTGCAAA +
Preference number: 6 (lower is better)
Translates to: TALYLSTLRAQR*RTVIPTEDFCK
Trigger: TTTGCAGAAGTCCTCGGTGGGGATCACCGTCCTCAACCTCTGCGCTCTTAGTGTTGACAGGTACAGAGCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000511804.5
ENST00000648866.1
ENST00000651419.1
CDS CAA 90 bp GCTCTGTACCCGGCCACAAGTGGGGCTTTTAAGAGTTCCACCCATTaGGAAATCAACTGCGTGGCAGGCCTGAGTCTGAGGTCTTTATTT +
Preference number: 6 (lower is better)
Translates to: ALYPATSGAFKSSTH*EINCVAGLSLRSLF
Trigger: AAATAAAGACCTCAGACTCAGGCCTGCCACGCAGTTGATTTCCAAATGGGTGGAACTCTTAAAAGCCCCACTTGTGGCCGGGTACAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000503721.1
CDS CAA 72 bp ATCTTGGTAGAACTGTCAACACTAAGAGCGCAGAGGTaGAGGACGGTGATCCCCACCGAGGACTTCTGCAAA +
Preference number: 6 (lower is better)
Translates to: ILVELSTLRAQR*RTVIPTEDFCK
Trigger: TTTGCAGAAGTCCTCGGTGGGGATCACCGTCCTCAACCTCTGCGCTCTTAGTGTTGACAGTTCTACCAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510697.5
CDS TCA 72 bp ATTTCAATGGCAGTTACCAAAGGAATCCCAATTCCCTaGACACGACTCCAGGAGGCAACTGCTCTGTACCCG +
Preference number: 6 (lower is better)
Translates to: ISMAVTKGIPIP*TRLQEATALYP
Trigger: CGGGTACAGAGCAGTTGCCTCCTGGAGTCGTGTTCAGGGAATTGGGATTCCTTTGGTAACTGCCATTGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000503721.1
CDS TCA 72 bp ATTTCAATGGCAGTTACCAAAGGAATCCCAATTCCCTaGACACGACTCCAGGAGGCAACTGCTCTGTACCTG +
Preference number: 6 (lower is better)
Translates to: ISMAVTKGIPIP*TRLQEATALYL
Trigger: CAGGTACAGAGCAGTTGCCTCCTGGAGTCGTGTTCAGGGAATTGGGATTCCTTTGGTAACTGCCATTGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000511804.5
ENST00000648866.1
ENST00000651419.1
CDS TCA 72 bp ATTTCAATGGCAGTTACCAAAGGAATCCCAATTCCCTaGACACGACTCCAGGAGGCAACTGCTCTGTACCTT +
Preference number: 6 (lower is better)
Translates to: ISMAVTKGIPIP*TRLQEATALYL
Trigger: AAGGTACAGAGCAGTTGCCTCCTGGAGTCGTGTTCAGGGAATTGGGATTCCTTTGGTAACTGCCATTGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000514245.1
CDS CAA 90 bp CCAAAAGGATGCCCTGAGGCAAAGGGTTTCCATCTTGAGGCAAATTaGAGGAAATATCTCTTATTGCACTTGTGCTGCTTTTACACCTTC +
Preference number: 6 (lower is better)
Translates to: PKGCPEAKGFHLEAN*RKYLLLHLCCFYTF
Trigger: GAAGGTGTAAAAGCAGCACAAGTGCAATAAGAGATATTTCCTCAAATTTGCCTCAAGATGGAAACCCTTTGCCTCAGGGCATCCTTTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000324300.10
ENST00000358556.8
ENST00000648866.1
ENST00000651419.1