RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EDF1 (Homo sapiens)

Ensembl gene IDs: ENSG00000107223

Ensembl transcript IDs: ENST00000224073.6, ENST00000371648.4, ENST00000371649.5

Found 170 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AACCGGAGCCGGGGTCCTCTGTGGAACTGGCTTCCGGCCCCATGCTaGCAGGGCCCGGACCCGCTGTGCTCAGGCTCAGAGAACCATCGC +
Preference number: 1 (lower is better)
Translates to: NRSRGPLWNWLPAPC*QGPDPLCSGSENHR
Trigger: GCGATGGTTCTCTGAGCCTGAGCACAGCGGGTCCGGGCCCTGTCAGCATGGGGCCGGAAGCCAGTTCCACAGAGGACCCCGGCTCCGGTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371648.4
3UTR CCA 90 bp AGAACGGAACTGGCGGCCAAGGGGAACCGGCGGAACGAGATCAGCTaGAGCGCACTGATTTCGAGGCTTTGTGTTCATTTCGCCCTAGGC +
Preference number: 1 (lower is better)
Translates to: RTELAAKGNRRNEIS*SALISRLCVHFALG
Trigger: GCCTAGGGCGAAATGAACACAAAGCCTCGAAATCAGTGCGCTCCAGCTGATCTCGTTCCGCCGGTTCCCCTTGGCCGCCAGTTCCGTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371649.5
3UTR CCA 90 bp CTCAGGCTCAGAGAACCATCGCCAACAGCACAGGCTGACGGGAACTaGCAAGGGGAAGGGACTCGGACTCCACTTGCTCTTAGGGGTTTC +
Preference number: 1 (lower is better)
Translates to: LRLREPSPTAQADGN*QGEGTRTPLALRGF
Trigger: GAAACCCCTAAGAGCAAGTGGAGTCCGAGTCCCTTCCCCTTGCCAGTTCCCGTCAGCCTGTGCTGTTGGCGATGGTTCTCTGAGCCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371648.4
3UTR-3UTR TCA 90 bp CCCTTGTTCCGTTCGGCCCGTGAGGAGAACGGAACTGGCGGCCAAGGGGAACCGGTTCCGTTCGGCCCGTaGGGAGAACGGAACTGGCGG +
Preference number: 2 (lower is better)
Translates to: PLFRSAREENGTGGQGEPVPFGP*GERNWR
Trigger: CCGCCAGTTCCGTTCTCCTCACGGGCCGAACGGAAC...CGGTTCCCCTTGGCCGCCAGTTCCGTTCTCCTCACGGGCCGAACGGAACAAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224073.6
ENST00000371649.5
3UTR-3UTR CCA 90 bp CAGGGCCCGGACCCGCTGTGCTCAGGCTCAGAGAACCATCGCCAACAGCACAGGCTCACCAACCCCAGCTaGGAGCGGGTAGCCTCCCTG +
Preference number: 2 (lower is better)
Translates to: QGPDPLCSGSENHRQQHRLTNPS*ERVASL
Trigger: CAGGGAGGCTACCCGCTCCCAGCTGGGGTTGGTGAG...CCTGTGCTGTTGGCGATGGTTCTCTGAGCCTGAGCACAGCGGGTCCGGGCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371648.4
3UTR-3UTR GCA 90 bp GGGCCCGGACCCGCTGTGCTCAGGCTCAGAGAACCATCGCCAACAGCACAGGCTGGGTTTCCTGAGGCCTaGAGAGACCCCACCATCCCT +
Preference number: 2 (lower is better)
Translates to: GPGPAVLRLREPSPTAQAGFPEA*RDPTIP
Trigger: AGGGATGGTGGGGTCTCTGCAGGCCTCAGGAAACCC...AGCCTGTGCTGTTGGCGATGGTTCTCTGAGCCTGAGCACAGCGGGTCCGGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371648.4
3UTR-3UTR CCA 90 bp GAACGGAACTGGCGGCCAAGGGGAACCGGCGGAACGAGATCAGCTGGAGCGCACATGAGCCACAGCCACTaGCCACTGCAGCACCAGCTC +
Preference number: 2 (lower is better)
Translates to: ERNWRPRGTGGTRSAGAHMSHSH*PLQHQL
Trigger: GAGCTGGTGCTGCAGTGGCCAGTGGCTGTGGCTCAT...GTGCGCTCCAGCTGATCTCGTTCCGCCGGTTCCCCTTGGCCGCCAGTTCCGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371649.5
3UTR-3UTR CCA 90 bp CCCGCAAGCTGGACCCCTTGTTCCGTTCGGCCCGTGAGGAGAACGGAACTGGCGCGGAACGAGATCAGCTaGAGCGCACTGATTTCGAGG +
Preference number: 2 (lower is better)
Translates to: PASWTPCSVRPVRRTELARNEIS*SALISR
Trigger: CCTCGAAATCAGTGCGCTCCAGCTGATCTCGTTCCG...CGCCAGTTCCGTTCTCCTCACGGGCCGAACGGAACAAGGGGTCCAGCTTGCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224073.6
ENST00000371649.5
3UTR-3UTR CCA 90 bp GACCCCTTGTTCCGTTCGGCCCGTGAGGAGAACGGAACTGGCGGCCAAGGGGAACGGAACGAGATCAGCTaGAGCGCACTGATTTCGAGG +
Preference number: 2 (lower is better)
Translates to: DPLFRSAREENGTGGQGERNEIS*SALISR
Trigger: CCTCGAAATCAGTGCGCTCCAGCTGATCTCGTTCCG...TTCCCCTTGGCCGCCAGTTCCGTTCTCCTCACGGGCCGAACGGAACAAGGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224073.6
ENST00000371649.5
3UTR-3UTR CCA 90 bp GAGATCAGCTGGAGCGCACTGATTTCGAGGCTTTGTGTTCATTTCGCCCTAGGCGGGTCCCCCGCAAGCTaGACCCCTTGTTCCGTTCGG +
Preference number: 2 (lower is better)
Translates to: EISWSALISRLCVHFALGGSPAS*TPCSVR
Trigger: CCGAACGGAACAAGGGGTCCAGCTTGCGGGGGACCC...GCCTAGGGCGAAATGAACACAAAGCCTCGAAATCAGTGCGCTCCAGCTGATCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371649.5
3UTR-3UTR CCA 90 bp TCTGATCACCTTAGACAGCAGAGCATGAACACCCCTCTCCGGAAGAACCGGAGCCAGGCTGACGGGAACTaGCAAGGGGAAGGGACTCGG +
Preference number: 2 (lower is better)
Translates to: SDHLRQQSMNTPLRKNRSQADGN*QGEGTR
Trigger: CCGAGTCCCTTCCCCTTGCCAGTTCCCGTCAGCCTG...GCTCCGGTTCTTCCGGAGAGGGGTGTTCATGCTCTGCTGTCTAAGGTGATCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371648.4
3UTR CAA 90 bp GAACCGGCGGAACGAGATCAGCTGGAGCGCACTGATTTCGAGGCTTaGTGTTCATTTCGCCCTAGGCCCCTTCTCGATGGGCTTTCCAAT +
Preference number: 2 (lower is better)
Translates to: EPAERDQLERTDFEA*CSFRPRPLLDGLSN
Trigger: ATTGGAAAGCCCATCGAGAAGGGGCCTAGGGCGAAATGAACACAAAGCCTCGAAATCAGTGCGCTCCAGCTGATCTCGTTCCGCCGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371649.5
3UTR-3UTR CCA 90 bp GCACAGGCTGACGGGAACTGGCAAGGGGAAGGGACTCGGACTCCACTTGCTCTTTCAGTCTGTACTACCTaGAGAAGCAAAGCTCCAGAA +
Preference number: 2 (lower is better)
Translates to: AQADGNWQGEGTRTPLALSVCTT*RSKAPE
Trigger: TTCTGGAGCTTTGCTTCTCCAGGTAGTACAGACTGA...AAGAGCAAGTGGAGTCCGAGTCCCTTCCCCTTGCCAGTTCCCGTCAGCCTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371648.4
3UTR TCA 72 bp CGGGGTCCTCTGTGGAACTGGCTTCCGGCCCCATGCTaGCAGGGCCCGGACCCGCTGTGCTCAGGCTCAGAG +
Preference number: 3 (lower is better)
Translates to: RGPLWNWLPAPC*QGPDPLCSGSE
Trigger: CTCTGAGCCTGAGCACAGCGGGTCCGGGCCCTGTCAGCATGGGGCCGGAAGCCAGTTCCACAGAGGACCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371648.4
3UTR-3UTR CAA 90 bp AAGGGGAACCGGCGGAACGAGATCAGCTGGAGCGCACTGATTTCGAGGCTTTGTCGCAAGCTGGACCCCTaGTTCCGTTCGGCCCGTGAG +
Preference number: 3 (lower is better)
Translates to: KGNRRNEISWSALISRLCRKLDP*FRSARE
Trigger: CTCACGGGCCGAACGGAACAAGGGGTCCAGCTTGCG...ACAAAGCCTCGAAATCAGTGCGCTCCAGCTGATCTCGTTCCGCCGGTTCCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224073.6
ENST00000371649.5
3UTR CCA 72 bp CTGGCGGCCAAGGGGAACCGGCGGAACGAGATCAGCTaGAGCGCACTGATTTCGAGGCTTTGTGTTCATTTC +
Preference number: 3 (lower is better)
Translates to: LAAKGNRRNEIS*SALISRLCVHF
Trigger: GAAATGAACACAAAGCCTCGAAATCAGTGCGCTCCAGCTGATCTCGTTCCGCCGGTTCCCCTTGGCCGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371649.5
3UTR CCA 72 bp AGAGAACCATCGCCAACAGCACAGGCTGACGGGAACTaGCAAGGGGAAGGGACTCGGACTCCACTTGCTCTT +
Preference number: 3 (lower is better)
Translates to: REPSPTAQADGN*QGEGTRTPLAL
Trigger: AAGAGCAAGTGGAGTCCGAGTCCCTTCCCCTTGCCAGTTCCCGTCAGCCTGTGCTGTTGGCGATGGTTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371648.4
3UTR-3UTR CAA 90 bp TTGTTCCGTTCGGCCCGTGAGGAGAACGGAACTGGCGGCCAAGGGGAACCGGCGTTTGCAAGGTTTTGTTaGTTTGACAGCAGGAATGGG +
Preference number: 3 (lower is better)
Translates to: LFRSAREENGTGGQGEPAFARFC*FDSRNG
Trigger: CCCATTCCTGCTGTCAAACAAACAAAACCTTGCAAA...CGCCGGTTCCCCTTGGCCGCCAGTTCCGTTCTCCTCACGGGCCGAACGGAACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224073.6
ENST00000371649.5
3UTR-3UTR CAA 90 bp GAACCGGCGGAACGAGATCAGCTGGAGCGCACTGATTTCGAGGCTTTGTGTTCATCCTTTCCCCGGAGCTaGAGGCCTGAAATGAGCCAC +
Preference number: 3 (lower is better)
Translates to: EPAERDQLERTDFEALCSSFPRS*RPEMSH
Trigger: GTGGCTCATTTCAGGCCTCAAGCTCCGGGGAAAGGA...TGAACACAAAGCCTCGAAATCAGTGCGCTCCAGCTGATCTCGTTCCGCCGGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371649.5
3UTR TCA 72 bp AAGAGGATGAGTCTGATCACCTTAGACAGCAGAGCATaGACACCCCTCTCCGGAAGAACCGGAGCCGGGGTC +
Preference number: 3 (lower is better)
Translates to: KRMSLITLDSRA*TPLSGRTGAGV
Trigger: GACCCCGGCTCCGGTTCTTCCGGAGAGGGGTGTTCATGCTCTGCTGTCTAAGGTGATCAGACTCATCCTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371648.4
3UTR-3UTR CAA 90 bp AAGGGGAACCGGCGGAACGAGATCAGCTGGAGCGCACTGATTTCGAGGCTTTGTTTTGCAAGGTTTTGTTaGTTTGACAGCAGGAATGGG +
Preference number: 3 (lower is better)
Translates to: KGNRRNEISWSALISRLCFARFC*FDSRNG
Trigger: CCCATTCCTGCTGTCAAACAAACAAAACCTTGCAAA...ACAAAGCCTCGAAATCAGTGCGCTCCAGCTGATCTCGTTCCGCCGGTTCCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000224073.6
ENST00000371649.5
CDS-3UTR TCA 90 bp AGAACCGGAGCCGGGGTCCTCTGTGGAACTGGCTTCCGGCCCCATGCTGACAGGCTTCCGGCCCCATGCTaGCAGGGCCCGGACCCGCTG +
Preference number: 4 (lower is better)
Translates to: RTGAGVLCGTGFRPHADRLPAPC*QGPDPL
Trigger: CAGCGGGTCCGGGCCCTGTCAGCATGGGGCCGGAAG...CCTGTCAGCATGGGGCCGGAAGCCAGTTCCACAGAGGACCCCGGCTCCGGTTCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371648.4
CDS-3UTR CCA 90 bp GTTCGGCCCGTGAGGAGAACGGAACTGGCGGCCAAGGGGAACCGGCGGAACGAGACAGCAGGAATGGGCTaGGGAGGGTCCCCCGCAAGC +
Preference number: 4 (lower is better)
Translates to: VRPVRRTELAAKGNRRNETAGMG*GGSPAS
Trigger: GCTTGCGGGGGACCCTCCCCAGCCCATTCCTGCTGT...CTCGTTCCGCCGGTTCCCCTTGGCCGCCAGTTCCGTTCTCCTCACGGGCCGAAC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224073.6
ENST00000371649.5
CDS-3UTR TCA 90 bp ACCCCTCTCCGGAAGAACCGGAGCCGGGGTCCTCTGTGGAACTGGCTTCCGGCCGCCAACAGCACAGGCTaGCGGGAACTGGCAAGGGGA +
Preference number: 4 (lower is better)
Translates to: TPLRKNRSRGPLWNWLPAANSTG*RELARG
Trigger: TCCCCTTGCCAGTTCCCGTCAGCCTGTGCTGTTGGC...GGCCGGAAGCCAGTTCCACAGAGGACCCCGGCTCCGGTTCTTCCGGAGAGGGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371648.4
CDS-3UTR CCA 90 bp CCCTTGTTCCGTTCGGCCCGTGAGGAGAACGGAACTGGCGGCCAAGGGGAACCGAGTCGCTCTCGGCCATaGCGGGCGAAGACGAGCGTC +
Preference number: 4 (lower is better)
Translates to: PLFRSAREENGTGGQGEPSRSRP*RAKTSV
Trigger: GACGCTCGTCTTCGCCCGCCATGGCCGAGAGCGACT...CGGTTCCCCTTGGCCGCCAGTTCCGTTCTCCTCACGGGCCGAACGGAACAAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224073.6
ENST00000371649.5
CDS-3UTR CCA 90 bp CGCAAGCTGGACCCCTTGTTCCGTTCGGCCCGTGAGGAGAACGGAACTGGCGGCGGGTCCCCCGCAAGCTaGACCCCTTGTTCCGTTCGG +
Preference number: 4 (lower is better)
Translates to: RKLDPLFRSAREENGTGGGSPAS*TPCSVR
Trigger: CCGAACGGAACAAGGGGTCCAGCTTGCGGGGGACCC...GCCGCCAGTTCCGTTCTCCTCACGGGCCGAACGGAACAAGGGGTCCAGCTTGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000224073.6
ENST00000371649.5
CDS-3UTR GCA 90 bp CCCGCAAGCTGGACCCCTTGTTCCGTTCGGCCCGTGAGGAGAACGGAACTGGCGACAGCCACTGGCCACTaGAGCACCAGCTCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: PASWTPCSVRPVRRTELATATGH*STSSLL
Trigger: GAGGAGGGAGCTGGTGCTGCAGTGGCCAGTGGCTGT...CGCCAGTTCCGTTCTCCTCACGGGCCGAACGGAACAAGGGGTCCAGCTTGCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371649.5
CDS-3UTR CCA 90 bp CGCAAGCTGGACCCCTTGTTCCGTTCGGCCCGTGAGGAGAACGGAACTGGCGGCTGCTTGGATTTGGCCTaGGCGGCCGTAGGGCCCTTC +
Preference number: 4 (lower is better)
Translates to: RKLDPLFRSAREENGTGGCLDLA*AAVGPF
Trigger: GAAGGGCCCTACGGCCGCCCAGGCCAAATCCAAGCA...GCCGCCAGTTCCGTTCTCCTCACGGGCCGAACGGAACAAGGGGTCCAGCTTGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224073.6
ENST00000371649.5
CDS-3UTR CCA 90 bp GACCCCTTGTTCCGTTCGGCCCGTGAGGAGAACGGAACTGGCGGCCAAGGGGAAGGGTCCCCCGCAAGCTaGACCCCTTGTTCCGTTCGG +
Preference number: 4 (lower is better)
Translates to: DPLFRSAREENGTGGQGEGSPAS*TPCSVR
Trigger: CCGAACGGAACAAGGGGTCCAGCTTGCGGGGGACCC...TTCCCCTTGGCCGCCAGTTCCGTTCTCCTCACGGGCCGAACGGAACAAGGGGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000224073.6
ENST00000371649.5
CDS-3UTR CCA 90 bp CCGGACCCGCTGTGCTCAGGCTCAGAGAACCATCGCCAACAGCACAGGCTGACGAGCCGGGGTCCTCTGTaGAACTGGCTTCCGGCCCCA +
Preference number: 4 (lower is better)
Translates to: PDPLCSGSENHRQQHRLTSRGPL*NWLPAP
Trigger: TGGGGCCGGAAGCCAGTTCCACAGAGGACCCCGGCT...CGTCAGCCTGTGCTGTTGGCGATGGTTCTCTGAGCCTGAGCACAGCGGGTCCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371648.4
CDS-3UTR TCA 90 bp GAACTGGCGGCCAAGGGGAACCGGCGGAACGAGATCAGCTGGAGCGCACTGATTGTTCCGTTCGGCCCGTaGGGAGAACGGAACTGGCGG +
Preference number: 4 (lower is better)
Translates to: ELAAKGNRRNEISWSALIVPFGP*GERNWR
Trigger: CCGCCAGTTCCGTTCTCCTCACGGGCCGAACGGAAC...AATCAGTGCGCTCCAGCTGATCTCGTTCCGCCGGTTCCCCTTGGCCGCCAGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224073.6
ENST00000371649.5
CDS-3UTR TCA 90 bp GGAGCCGGGGTCCTCTGTGGAACTGGCTTCCGGCCCCATGCTGACAGGGCCCGGTTAGACAGCAGAGCATaGACACCCCTCTCCGGAAGA +
Preference number: 4 (lower is better)
Translates to: GAGVLCGTGFRPHADRARLDSRA*TPLSGR
Trigger: TCTTCCGGAGAGGGGTGTTCATGCTCTGCTGTCTAA...CCGGGCCCTGTCAGCATGGGGCCGGAAGCCAGTTCCACAGAGGACCCCGGCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371648.4
CDS-3UTR GCA 90 bp CCCATGCTGACAGGGCCCGGACCCGCTGTGCTCAGGCTCAGAGAACCATCGCCAGTCACCCTGTCATGGTaGAGCTCCTCTGTCTCCCGG +
Preference number: 4 (lower is better)
Translates to: PMLTGPGPAVLRLREPSPVTLSW*SSSVSR
Trigger: CCGGGAGACAGAGGAGCTGCACCATGACAGGGTGAC...TGGCGATGGTTCTCTGAGCCTGAGCACAGCGGGTCCGGGCCCTGTCAGCATGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371648.4
CDS-3UTR CCA 90 bp TCGGCCCGTGAGGAGAACGGAACTGGCGGCCAAGGGGAACCGGCGGAACGAGATCTCTGCCGACCTTGCTaGATCACCTTGCCCACCTCC +
Preference number: 4 (lower is better)
Translates to: SAREENGTGGQGEPAERDLCRPC*ITLPTS
Trigger: GGAGGTGGGCAAGGTGATCCAGCAAGGTCGGCAGAG...ATCTCGTTCCGCCGGTTCCCCTTGGCCGCCAGTTCCGTTCTCCTCACGGGCCGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224073.6
ENST00000371649.5
CDS-3UTR CCA 90 bp GAACGGAACTGGCGGCCAAGGGGAACCGGCGGAACGAGATCAGCTGGAGCGCACCTCTGCCGACCTTGCTaGATCACCTTGCCCACCTCC +
Preference number: 4 (lower is better)
Translates to: ERNWRPRGTGGTRSAGAHLCRPC*ITLPTS
Trigger: GGAGGTGGGCAAGGTGATCCAGCAAGGTCGGCAGAG...GTGCGCTCCAGCTGATCTCGTTCCGCCGGTTCCCCTTGGCCGCCAGTTCCGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224073.6
ENST00000371649.5
CDS-3UTR GCA 90 bp CCAGGGCCATCTTCTTCCCCCGAGTCCCACTCTCACCAACCCCAGCTGGGAGCGGCCGCTAAGATAGCCTaGTTGGATTTGGCCTGGGCG +
Preference number: 4 (lower is better)
Translates to: PGPSSSPESHSHQPQLGAAAKIA*LDLAWA
Trigger: CGCCCAGGCCAAATCCAAGCAGGCTATCTTAGCGGC...CGCTCCCAGCTGGGGTTGGTGAGAGTGGGACTCGGGGGAAGAAGATGGCCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371648.4
CDS-3UTR GCA 90 bp AGAACGGAACTGGCGGCCAAGGGGAACCGGCGGAACGAGATCAGCTGGAGCGCAGTCACCCTGTCATGGTaGAGCTCCTCTGTCTCCCGG +
Preference number: 4 (lower is better)
Translates to: RTELAAKGNRRNEISWSAVTLSW*SSSVSR
Trigger: CCGGGAGACAGAGGAGCTGCACCATGACAGGGTGAC...TGCGCTCCAGCTGATCTCGTTCCGCCGGTTCCCCTTGGCCGCCAGTTCCGTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224073.6
ENST00000371649.5
CDS-3UTR CCA 90 bp AACACCCCTCTCCGGAAGAACCGGAGCCGGGGTCCTCTGTGGAACTGGCTTCCGCTCTGCCGACCTTGCTaGATCACCTTGCCCACCTCC +
Preference number: 4 (lower is better)
Translates to: NTPLRKNRSRGPLWNWLPLCRPC*ITLPTS
Trigger: GGAGGTGGGCAAGGTGATCCAGCAAGGTCGGCAGAG...CGGAAGCCAGTTCCACAGAGGACCCCGGCTCCGGTTCTTCCGGAGAGGGGTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371648.4
CDS-3UTR CCA 90 bp ATGAACACCCCTCTCCGGAAGAACCGGAGCCGGGGTCCTCTGTGGAACTGGCTTCTCACCAACCCCAGCTaGGAGCGGGTAGCCTCCCTG +
Preference number: 4 (lower is better)
Translates to: MNTPLRKNRSRGPLWNWLLTNPS*ERVASL
Trigger: CAGGGAGGCTACCCGCTCCCAGCTGGGGTTGGTGAG...AAGCCAGTTCCACAGAGGACCCCGGCTCCGGTTCTTCCGGAGAGGGGTGTTCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371648.4
CDS-3UTR GCA 90 bp GCGGCCAAGGGGAACCGGCGGAACGAGATCAGCTGGAGCGCACTGATTTCGAGGGCCGCTAAGATAGCCTaGTTGGATTTGGCCTGGGCG +
Preference number: 4 (lower is better)
Translates to: AAKGNRRNEISWSALISRAAKIA*LDLAWA
Trigger: CGCCCAGGCCAAATCCAAGCAGGCTATCTTAGCGGC...CCTCGAAATCAGTGCGCTCCAGCTGATCTCGTTCCGCCGGTTCCCCTTGGCCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224073.6
ENST00000371649.5
CDS-3UTR GCA 90 bp GACCCCTTGTTCCGTTCGGCCCGTGAGGAGAACGGAACTGGCGGCCAAGGGGAATTGCTCTGCCGACCTTaGTGGATCACCTTGCCCACC +
Preference number: 4 (lower is better)
Translates to: DPLFRSAREENGTGGQGELLCRP*WITLPT
Trigger: GGTGGGCAAGGTGATCCAGCAAGGTCGGCAGAGCAA...TTCCCCTTGGCCGCCAGTTCCGTTCTCCTCACGGGCCGAACGGAACAAGGGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224073.6
ENST00000371649.5
CDS-3UTR CCA 90 bp TTTGTTTGTTTGACAGCAGGAATGGGCTGGGGAGGGTCCCCCGCAAGCTGGACCAGTCGCTCTCGGCCATaGCGGGCGAAGACGAGCGTC +
Preference number: 4 (lower is better)
Translates to: FVCLTAGMGWGGSPASWTSRSRP*RAKTSV
Trigger: GACGCTCGTCTTCGCCCGCCATGGCCGAGAGCGACT...GGTCCAGCTTGCGGGGGACCCTCCCCAGCCCATTCCTGCTGTCAAACAAACAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224073.6
ENST00000371649.5
CDS-3UTR CCA 90 bp CAGGGCCATCTTCTTCCCCCGAGTCCCACTCTCACCAACCCCAGCTGGGAGCGGCAAGCACCTGGTTATTaGGTATGGCCCGTCCGCTCT +
Preference number: 4 (lower is better)
Translates to: QGHLLPPSPTLTNPSWERQAPGY*VWPVRS
Trigger: AGAGCGGACGGGCCATACCCAATAACCAGGTGCTTG...CCGCTCCCAGCTGGGGTTGGTGAGAGTGGGACTCGGGGGAAGAAGATGGCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371648.4
CDS-3UTR TCA 90 bp CGCAAGCTGGACCCCTTGTTCCGTTCGGCCCGTGAGGAGAACGGAACTGGCGGCTCAGCTGGAGCGCACTaGTTTCGAGGCTTTGTGTTC +
Preference number: 4 (lower is better)
Translates to: RKLDPLFRSAREENGTGGSAGAH*FRGFVF
Trigger: GAACACAAAGCCTCGAAATCAGTGCGCTCCAGCTGA...GCCGCCAGTTCCGTTCTCCTCACGGGCCGAACGGAACAAGGGGTCCAGCTTGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224073.6
ENST00000371649.5
CDS-3UTR TCA 90 bp AAGGGGAACCGGCGGAACGAGATCAGCTGGAGCGCACTGATTTCGAGGCTTTGTGTTCCGTTCGGCCCGTaGGGAGAACGGAACTGGCGG +
Preference number: 4 (lower is better)
Translates to: KGNRRNEISWSALISRLCVPFGP*GERNWR
Trigger: CCGCCAGTTCCGTTCTCCTCACGGGCCGAACGGAAC...ACAAAGCCTCGAAATCAGTGCGCTCCAGCTGATCTCGTTCCGCCGGTTCCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224073.6
ENST00000371649.5
CDS-3UTR CCA 90 bp GGCCCCTTCTCGATGGGCTTTCCAATGTCCTTTCCCCGGAGCTTGAGGCCTGAATGCTTGGATTTGGCCTaGGCGGCCGTAGGGCCCTTC +
Preference number: 4 (lower is better)
Translates to: GPFSMGFPMSFPRSLRPECLDLA*AAVGPF
Trigger: GAAGGGCCCTACGGCCGCCCAGGCCAAATCCAAGCA...TTCAGGCCTCAAGCTCCGGGGAAAGGACATTGGAAAGCCCATCGAGAAGGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371649.5
CDS-3UTR CCA 90 bp GCGGCCAAGGGGAACCGGCGGAACGAGATCAGCTGGAGCGCACTGATTTCGAGGCAAGCACCTGGTTATTaGGTATGGCCCGTCCGCTCT +
Preference number: 4 (lower is better)
Translates to: AAKGNRRNEISWSALISRQAPGY*VWPVRS
Trigger: AGAGCGGACGGGCCATACCCAATAACCAGGTGCTTG...CCTCGAAATCAGTGCGCTCCAGCTGATCTCGTTCCGCCGGTTCCCCTTGGCCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224073.6
ENST00000371649.5
CDS-3UTR TCA 90 bp GCGGCCAAGGGGAACCGGCGGAACGAGATCAGCTGGAGCGCACTGATTTCGAGGCCTGTGGCTTCTCATTaGTTTTCGTGGCCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: AAKGNRRNEISWSALISRPVASH*FSWPGP
Trigger: AGGACCTGGCCACGAAAATCAATGAGAAGCCACAGG...CCTCGAAATCAGTGCGCTCCAGCTGATCTCGTTCCGCCGGTTCCCCTTGGCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224073.6
ENST00000371649.5
CDS-3UTR TCA 90 bp AGGAGAACGGAACTGGCGGCCAAGGGGAACCGGCGGAACGAGATCAGCTGGAGCCCTGTGGCTTCTCATTaGTTTTCGTGGCCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: RRTELAAKGNRRNEISWSPVASH*FSWPGP
Trigger: AGGACCTGGCCACGAAAATCAATGAGAAGCCACAGG...GCTCCAGCTGATCTCGTTCCGCCGGTTCCCCTTGGCCGCCAGTTCCGTTCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224073.6
ENST00000371649.5
CDS-3UTR GCA 90 bp ATGAACACCCCTCTCCGGAAGAACCGGAGCCGGGGTCCTCTGTGGAACTGGCTTTTGCTCTGCCGACCTTaGTGGATCACCTTGCCCACC +
Preference number: 4 (lower is better)
Translates to: MNTPLRKNRSRGPLWNWLLLCRP*WITLPT
Trigger: GGTGGGCAAGGTGATCCAGCAAGGTCGGCAGAGCAA...AAGCCAGTTCCACAGAGGACCCCGGCTCCGGTTCTTCCGGAGAGGGGTGTTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371648.4
CDS-3UTR GCA 90 bp AACGGAACTGGCGGCCAAGGGGAACCGGCGGAACGAGATCAGCTGGAGCGCACTTGGCCCGCTCGATTTTaGCAAGCACCTGGTTATTGG +
Preference number: 4 (lower is better)
Translates to: NGTGGQGEPAERDQLERTWPARF*QAPGYW
Trigger: CCAATAACCAGGTGCTTGGCAAAATCGAGCGGGCCA...AGTGCGCTCCAGCTGATCTCGTTCCGCCGGTTCCCCTTGGCCGCCAGTTCCGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224073.6
ENST00000371649.5
CDS-3UTR CCA 90 bp CGTGAGGAGAACGGAACTGGCGGCCAAGGGGAACCGGCGGAACGAGATCAGCTGCCTGGTTATTGGGTATaGCCCGTCCGCTCTCATAGT +
Preference number: 4 (lower is better)
Translates to: REENGTGGQGEPAERDQLPGYWV*PVRSHS
Trigger: ACTATGAGAGCGGACGGGCCATACCCAATAACCAGG...CAGCTGATCTCGTTCCGCCGGTTCCCCTTGGCCGCCAGTTCCGTTCTCCTCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224073.6
ENST00000371649.5
CDS-3UTR CCA 90 bp AACGGAACTGGCGGCCAAGGGGAACCGGCGGAACGAGATCAGCTGGAGCGCACTCCTGGTTATTGGGTATaGCCCGTCCGCTCTCATAGT +
Preference number: 4 (lower is better)
Translates to: NGTGGQGEPAERDQLERTPGYWV*PVRSHS
Trigger: ACTATGAGAGCGGACGGGCCATACCCAATAACCAGG...AGTGCGCTCCAGCTGATCTCGTTCCGCCGGTTCCCCTTGGCCGCCAGTTCCGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224073.6
ENST00000371649.5
CDS-3UTR CCA 90 bp GAACTGGCGGCCAAGGGGAACCGGCGGAACGAGATCAGCTGGAGCGCACTGATTCGGAACGAGATCAGCTaGAGCGCACTGATTTCGAGG +
Preference number: 4 (lower is better)
Translates to: ELAAKGNRRNEISWSALIRNEIS*SALISR
Trigger: CCTCGAAATCAGTGCGCTCCAGCTGATCTCGTTCCG...AATCAGTGCGCTCCAGCTGATCTCGTTCCGCCGGTTCCCCTTGGCCGCCAGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224073.6
ENST00000371649.5
CDS-3UTR CCA 90 bp CCCTTGTTCCGTTCGGCCCGTGAGGAGAACGGAACTGGCGGCCAAGGGGAACCGTGGTTCCCACATCAATaGCCCGCTCGATTTTGCCAA +
Preference number: 4 (lower is better)
Translates to: PLFRSAREENGTGGQGEPWFPHQ*PARFCQ
Trigger: TTGGCAAAATCGAGCGGGCCATTGATGTGGGAACCA...CGGTTCCCCTTGGCCGCCAGTTCCGTTCTCCTCACGGGCCGAACGGAACAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371649.5
CDS-3UTR CCA 90 bp CCGGACCCGCTGTGCTCAGGCTCAGAGAACCATCGCCAACAGCACAGGCTGACGAGGGACACTCACCAATaGCCCGCTCGATTTTGCCAA +
Preference number: 4 (lower is better)
Translates to: PDPLCSGSENHRQQHRLTRDTHQ*PARFCQ
Trigger: TTGGCAAAATCGAGCGGGCCATTGGTGAGTGTCCCT...CGTCAGCCTGTGCTGTTGGCGATGGTTCTCTGAGCCTGAGCACAGCGGGTCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371648.4
CDS-3UTR GCA 90 bp CAAGGGGAACCGGCGGAACGAGATCAGCTGGAGCGCACTGATTTCGAGGCTTTGGCCGCTAAGATAGCCTaGTTGGATTTGGCCTGGGCG +
Preference number: 4 (lower is better)
Translates to: QGEPAERDQLERTDFEALAAKIA*LDLAWA
Trigger: CGCCCAGGCCAAATCCAAGCAGGCTATCTTAGCGGC...CAAAGCCTCGAAATCAGTGCGCTCCAGCTGATCTCGTTCCGCCGGTTCCCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224073.6
ENST00000371649.5
CDS-3UTR GCA 90 bp ATGCTGACAGGGCCCGGACCCGCTGTGCTCAGGCTCAGAGAACCATCGCCAACATGGCCCGCTCGATTTTaGCAAGCACCTGGTTATTGG +
Preference number: 4 (lower is better)
Translates to: MLTGPGPAVLRLREPSPTWPARF*QAPGYW
Trigger: CCAATAACCAGGTGCTTGGCAAAATCGAGCGGGCCA...TGTTGGCGATGGTTCTCTGAGCCTGAGCACAGCGGGTCCGGGCCCTGTCAGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371648.4
CDS-3UTR CCA 90 bp TCTGATCACCTTAGACAGCAGAGCATGAACACCCCTCTCCGGAAGAACCGGAGCTGCTTGGATTTGGCCTaGGCGGCCGTAGGGCCCTTC +
Preference number: 4 (lower is better)
Translates to: SDHLRQQSMNTPLRKNRSCLDLA*AAVGPF
Trigger: GAAGGGCCCTACGGCCGCCCAGGCCAAATCCAAGCA...GCTCCGGTTCTTCCGGAGAGGGGTGTTCATGCTCTGCTGTCTAAGGTGATCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371648.4
CDS-3UTR CCA 90 bp TTCCGTTCGGCCCGTGAGGAGAACGGAACTGGCGGCCAAGGGGAACCGGCGGAACAGCAGCCCATTTCTTaGAAGTCTCCACATCTTCTC +
Preference number: 4 (lower is better)
Translates to: FRSAREENGTGGQGEPAEQQPIS*KSPHLL
Trigger: GAGAAGATGTGGAGACTTCCAAGAAATGGGCTGCTG...TTCCGCCGGTTCCCCTTGGCCGCCAGTTCCGTTCTCCTCACGGGCCGAACGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224073.6
ENST00000371649.5
CDS-3UTR CCA 90 bp CCCATGCTGACAGGGCCCGGACCCGCTGTGCTCAGGCTCAGAGAACCATCGCCAGTCCGCGATCACCTGTaGCTTCTCATTGATTTTCGT +
Preference number: 4 (lower is better)
Translates to: PMLTGPGPAVLRLREPSPVRDHL*LLIDFR
Trigger: ACGAAAATCAATGAGAAGCCACAGGTGATCGCGGAC...TGGCGATGGTTCTCTGAGCCTGAGCACAGCGGGTCCGGGCCCTGTCAGCATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371648.4
CDS-3UTR CCA 90 bp CCCGTGAGGAGAACGGAACTGGCGGCCAAGGGGAACCGGCGGAACGAGATCAGCGTCCGCGATCACCTGTaGCTTCTCATTGATTTTCGT +
Preference number: 4 (lower is better)
Translates to: PVRRTELAAKGNRRNEISVRDHL*LLIDFR
Trigger: ACGAAAATCAATGAGAAGCCACAGGTGATCGCGGAC...GCTGATCTCGTTCCGCCGGTTCCCCTTGGCCGCCAGTTCCGTTCTCCTCACGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224073.6
ENST00000371649.5
CDS-3UTR CCA 90 bp TGGACCCCTTGTTCCGTTCGGCCCGTGAGGAGAACGGAACTGGCGGCCAAGGGGATTTTGCCAAGCACCTaGTTATTGGGTATGGCCCGT +
Preference number: 4 (lower is better)
Translates to: WTPCSVRPVRRTELAAKGILPST*LLGMAR
Trigger: ACGGGCCATACCCAATAACCAGGTGCTTGGCAAAAT...CCCCTTGGCCGCCAGTTCCGTTCTCCTCACGGGCCGAACGGAACAAGGGGTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000224073.6
ENST00000371649.5
CDS-3UTR CCA 90 bp TCCGGAAGAACCGGAGCCGGGGTCCTCTGTGGAACTGGCTTCCGGCCCCATGCTATTTTGCCAAGCACCTaGTTATTGGGTATGGCCCGT +
Preference number: 4 (lower is better)
Translates to: SGRTGAGVLCGTGFRPHAILPST*LLGMAR
Trigger: ACGGGCCATACCCAATAACCAGGTGCTTGGCAAAAT...AGCATGGGGCCGGAAGCCAGTTCCACAGAGGACCCCGGCTCCGGTTCTTCCGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371648.4
CDS-3UTR TCA 90 bp ATGAACACCCCTCTCCGGAAGAACCGGAGCCGGGGTCCTCTGTGGAACTGGCTTCCTGTGGCTTCTCATTaGTTTTCGTGGCCAGGTCCT +
Preference number: 4 (lower is better)
Translates to: MNTPLRKNRSRGPLWNWLPVASH*FSWPGP
Trigger: AGGACCTGGCCACGAAAATCAATGAGAAGCCACAGG...AAGCCAGTTCCACAGAGGACCCCGGCTCCGGTTCTTCCGGAGAGGGGTGTTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371648.4
CDS-3UTR GCA 90 bp TCTGATCACCTTAGACAGCAGAGCATGAACACCCCTCTCCGGAAGAACCGGAGCGGGTTTCCTGAGGCCTaGAGAGACCCCACCATCCCT +
Preference number: 4 (lower is better)
Translates to: SDHLRQQSMNTPLRKNRSGFPEA*RDPTIP
Trigger: AGGGATGGTGGGGTCTCTGCAGGCCTCAGGAAACCC...GCTCCGGTTCTTCCGGAGAGGGGTGTTCATGCTCTGCTGTCTAAGGTGATCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371648.4
CDS-3UTR CCA 90 bp CCCGCAAGCTGGACCCCTTGTTCCGTTCGGCCCGTGAGGAGAACGGAACTGGCGGAATGTTGTTTGTTCTaGCCAGCAGCCCATTTCTTG +
Preference number: 4 (lower is better)
Translates to: PASWTPCSVRPVRRTELAECCLF*PAAHFL
Trigger: CAAGAAATGGGCTGCTGGCCAGAACAAACAACATTC...CGCCAGTTCCGTTCTCCTCACGGGCCGAACGGAACAAGGGGTCCAGCTTGCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224073.6
ENST00000371649.5
CDS-3UTR CCA 90 bp CCCGTGAGGAGAACGGAACTGGCGGCCAAGGGGAACCGGCGGAACGAGATCAGCGAATGTTGTTTGTTCTaGCCAGCAGCCCATTTCTTG +
Preference number: 4 (lower is better)
Translates to: PVRRTELAAKGNRRNEISECCLF*PAAHFL
Trigger: CAAGAAATGGGCTGCTGGCCAGAACAAACAACATTC...GCTGATCTCGTTCCGCCGGTTCCCCTTGGCCGCCAGTTCCGTTCTCCTCACGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224073.6
ENST00000371649.5
CDS-3UTR CCA 90 bp AGGAGAACGGAACTGGCGGCCAAGGGGAACCGGCGGAACGAGATCAGCTGGAGCGTCCGCGATCACCTGTaGCTTCTCATTGATTTTCGT +
Preference number: 4 (lower is better)
Translates to: RRTELAAKGNRRNEISWSVRDHL*LLIDFR
Trigger: ACGAAAATCAATGAGAAGCCACAGGTGATCGCGGAC...GCTCCAGCTGATCTCGTTCCGCCGGTTCCCCTTGGCCGCCAGTTCCGTTCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224073.6
ENST00000371649.5
CDS-3UTR CCA 90 bp CTCAGGCTCAGAGAACCATCGCCAACAGCACAGGCTGACGGGAACTGGCAAGGGCCTGGTTATTGGGTATaGCCCGTCCGCTCTCATAGT +
Preference number: 4 (lower is better)
Translates to: LRLREPSPTAQADGNWQGPGYWV*PVRSHS
Trigger: ACTATGAGAGCGGACGGGCCATACCCAATAACCAGG...CCCTTGCCAGTTCCCGTCAGCCTGTGCTGTTGGCGATGGTTCTCTGAGCCTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371648.4
CDS-3UTR CCA 90 bp GACCCCTTGTTCCGTTCGGCCCGTGAGGAGAACGGAACTGGCGGCCAAGGGGAAATTTTGCCAAGCACCTaGTTATTGGGTATGGCCCGT +
Preference number: 4 (lower is better)
Translates to: DPLFRSAREENGTGGQGEILPST*LLGMAR
Trigger: ACGGGCCATACCCAATAACCAGGTGCTTGGCAAAAT...TTCCCCTTGGCCGCCAGTTCCGTTCTCCTCACGGGCCGAACGGAACAAGGGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000224073.6
ENST00000371649.5
CDS-3UTR CCA 90 bp TTTGTTTGTTTGACAGCAGGAATGGGCTGGGGAGGGTCCCCCGCAAGCTGGACCCGGAACGAGATCAGCTaGAGCGCACTGATTTCGAGG +
Preference number: 4 (lower is better)
Translates to: FVCLTAGMGWGGSPASWTRNEIS*SALISR
Trigger: CCTCGAAATCAGTGCGCTCCAGCTGATCTCGTTCCG...GGTCCAGCTTGCGGGGGACCCTCCCCAGCCCATTCCTGCTGTCAAACAAACAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000224073.6
ENST00000371649.5
CDS-3UTR CCA 90 bp GAACGAGATCAGCTGGAGCGCACTGATTTCGAGGCTTTGTGTTCATTTCGCCCTACAGCAGGAATGGGCTaGGGAGGGTCCCCCGCAAGC +
Preference number: 4 (lower is better)
Translates to: ERDQLERTDFEALCSFRPTAGMG*GGSPAS
Trigger: GCTTGCGGGGGACCCTCCCCAGCCCATTCCTGCTGT...AGGGCGAAATGAACACAAAGCCTCGAAATCAGTGCGCTCCAGCTGATCTCGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371649.5
CDS-3UTR CCA 90 bp GAGATCAGCTGGAGCGCACTGATTTCGAGGCTTTGTGTTCATTTCGCCCTAGGCGCTCCCGTGCCTCACTaGGCTCTCAGCACACGAGCA +
Preference number: 4 (lower is better)
Translates to: EISWSALISRLCVHFALGAPVPH*ALSTRA
Trigger: TGCTCGTGTGCTGAGAGCCCAGTGAGGCACGGGAGC...GCCTAGGGCGAAATGAACACAAAGCCTCGAAATCAGTGCGCTCCAGCTGATCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371649.5
CDS-3UTR CCA 90 bp GCTGACAGGGCCCGGACCCGCTGTGCTCAGGCTCAGAGAACCATCGCCAACAGCTCAGTCTGTACTACCTaGAGAAGCAAAGCTCCAGAA +
Preference number: 4 (lower is better)
Translates to: ADRARTRCAQAQRTIANSSVCTT*RSKAPE
Trigger: TTCTGGAGCTTTGCTTCTCCAGGTAGTACAGACTGA...GCTGTTGGCGATGGTTCTCTGAGCCTGAGCACAGCGGGTCCGGGCCCTGTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371648.4
CDS-3UTR GCA 90 bp GGCCCCTTCTCGATGGGCTTTCCAATGTCCTTTCCCCGGAGCTTGAGGCCTGAATGGCCCGCTCGATTTTaGCAAGCACCTGGTTATTGG +
Preference number: 4 (lower is better)
Translates to: GPFSMGFPMSFPRSLRPEWPARF*QAPGYW
Trigger: CCAATAACCAGGTGCTTGGCAAAATCGAGCGGGCCA...TTCAGGCCTCAAGCTCCGGGGAAAGGACATTGGAAAGCCCATCGAGAAGGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371649.5
CDS-3UTR CCA 90 bp GAACTGGCGGCCAAGGGGAACCGGCGGAACGAGATCAGCTGGAGCGCACTGATTCAGCAGCCCATTTCTTaGAAGTCTCCACATCTTCTC +
Preference number: 4 (lower is better)
Translates to: ELAAKGNRRNEISWSALIQQPIS*KSPHLL
Trigger: GAGAAGATGTGGAGACTTCCAAGAAATGGGCTGCTG...AATCAGTGCGCTCCAGCTGATCTCGTTCCGCCGGTTCCCCTTGGCCGCCAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224073.6
ENST00000371649.5
CDS-3UTR CCA 90 bp GATGAGTCTGATCACCTTAGACAGCAGAGCATGAACACCCCTCTCCGGAAGAACGGACCCGGCGAAGGGTaGAGGGACACTCACCAATGG +
Preference number: 4 (lower is better)
Translates to: DESDHLRQQSMNTPLRKNGPGEG*RDTHQW
Trigger: CCATTGGTGAGTGTCCCTCCACCCTTCGCCGGGTCC...GTTCTTCCGGAGAGGGGTGTTCATGCTCTGCTGTCTAAGGTGATCAGACTCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371648.4
3UTR CAA 72 bp GAACGAGATCAGCTGGAGCGCACTGATTTCGAGGCTTaGTGTTCATTTCGCCCTAGGCCCCTTCTCGATGGG +
Preference number: 4 (lower is better)
Translates to: ERDQLERTDFEA*CSFRPRPLLDG
Trigger: CCCATCGAGAAGGGGCCTAGGGCGAAATGAACACAAAGCCTCGAAATCAGTGCGCTCCAGCTGATCTCGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371649.5
CDS-3UTR TCA 90 bp TGTTCATTTCGCCCTAGGCCCCTTCTCGATGGGCTTTCCAATGTCCTTTCCCCGTCAGCTGGAGCGCACTaGTTTCGAGGCTTTGTGTTC +
Preference number: 4 (lower is better)
Translates to: CSFRPRPLLDGLSNVLSPSAGAH*FRGFVF
Trigger: GAACACAAAGCCTCGAAATCAGTGCGCTCCAGCTGA...CGGGGAAAGGACATTGGAAAGCCCATCGAGAAGGGGCCTAGGGCGAAATGAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371649.5
CDS-3UTR GCA 90 bp GAACGAGATCAGCTGGAGCGCACTGATTTCGAGGCTTTGTGTTCATTTCGCCCTTTGCTCTGCCGACCTTaGTGGATCACCTTGCCCACC +
Preference number: 4 (lower is better)
Translates to: ERDQLERTDFEALCSFRPLLCRP*WITLPT
Trigger: GGTGGGCAAGGTGATCCAGCAAGGTCGGCAGAGCAA...AGGGCGAAATGAACACAAAGCCTCGAAATCAGTGCGCTCCAGCTGATCTCGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371649.5
CDS-3UTR GCA 90 bp TTTGAAGAGGATGAGTCTGATCACCTTAGACAGCAGAGCATGAACACCCCTCTCGGCCCGGACCCGCTGTaGTCAGGCTCAGAGAACCAT +
Preference number: 4 (lower is better)
Translates to: FEEDESDHLRQQSMNTPLGPDPL*SGSENH
Trigger: ATGGTTCTCTGAGCCTGAGCACAGCGGGTCCGGGCC...GAGAGGGGTGTTCATGCTCTGCTGTCTAAGGTGATCAGACTCATCCTCTTCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371648.4
CDS-3UTR CCA 90 bp CCGGCGGAACGAGATCAGCTGGAGCGCACTGATTTCGAGGCTTTGTGTTCATTTCAAGCACCTGGTTATTaGGTATGGCCCGTCCGCTCT +
Preference number: 4 (lower is better)
Translates to: PAERDQLERTDFEALCSFQAPGY*VWPVRS
Trigger: AGAGCGGACGGGCCATACCCAATAACCAGGTGCTTG...AAATGAACACAAAGCCTCGAAATCAGTGCGCTCCAGCTGATCTCGTTCCGCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371649.5
CDS-3UTR CCA 90 bp GAACGAGATCAGCTGGAGCGCACTGATTTCGAGGCTTTGTGTTCATTTCGCCCTGCACACGAGCACTCCTaGTTCCCACATCAATGGCCC +
Preference number: 4 (lower is better)
Translates to: ERDQLERTDFEALCSFRPAHEHS*FPHQWP
Trigger: GGGCCATTGATGTGGGAACCAGGAGTGCTCGTGTGC...AGGGCGAAATGAACACAAAGCCTCGAAATCAGTGCGCTCCAGCTGATCTCGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371649.5
CDS-3UTR CCA 90 bp TTTGAAGAGGATGAGTCTGATCACCTTAGACAGCAGAGCATGAACACCCCTCTCCAGGCTGACGGGAACTaGCAAGGGGAAGGGACTCGG +
Preference number: 4 (lower is better)
Translates to: FEEDESDHLRQQSMNTPLQADGN*QGEGTR
Trigger: CCGAGTCCCTTCCCCTTGCCAGTTCCCGTCAGCCTG...GAGAGGGGTGTTCATGCTCTGCTGTCTAAGGTGATCAGACTCATCCTCTTCAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371648.4
CDS-3UTR CCA 90 bp CCTGCAGAGACCCCACCATCCCTCAGTCTGTACTACCTGGAGAAGCAAAGCTCCCAGCAGCCCATTTCTTaGAAGTCTCCACATCTTCTC +
Preference number: 4 (lower is better)
Translates to: PAETPPSLSLYYLEKQSSQQPIS*KSPHLL
Trigger: GAGAAGATGTGGAGACTTCCAAGAAATGGGCTGCTG...GGAGCTTTGCTTCTCCAGGTAGTACAGACTGAGGGATGGTGGGGTCTCTGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371648.4
CDS-3UTR CCA 90 bp CCTGCAGAGACCCCACCATCCCTCAGTCTGTACTACCTGGAGAAGCAAAGCTCCGAATGTTGTTTGTTCTaGCCAGCAGCCCATTTCTTG +
Preference number: 4 (lower is better)
Translates to: PAETPPSLSLYYLEKQSSECCLF*PAAHFL
Trigger: CAAGAAATGGGCTGCTGGCCAGAACAAACAACATTC...GGAGCTTTGCTTCTCCAGGTAGTACAGACTGAGGGATGGTGGGGTCTCTGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371648.4
CDS CCA 90 bp CCTTCTTGCGCAGCACCGTCACCGTGTCCCAGTCGCTCTCGGCCATaGCGGGCGAAGACGAGCGTCCGTCCGGCGGCTCAGCGGCAGCTG +
Preference number: 5 (lower is better)
Translates to: PSCAAPSPCPSRSRP*RAKTSVRPAAQRQL
Trigger: CAGCTGCCGCTGAGCCGCCGGACGGACGCTCGTCTTCGCCCGCCATGGCCGAGAGCGACTGGGACACGGTGACGGTGCTGCGCAAGAAGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224073.6
CDS CCA 90 bp CAGGGCCATCTTCTTCCCCCGAGTCCCACTCTCACCAACCCCAGCTaGGAGCGGGTAGCCTCCCTGTTCAGCGGACCCGGCGAAGGGTGG +
Preference number: 5 (lower is better)
Translates to: QGHLLPPSPTLTNPS*ERVASLFSGPGEGW
Trigger: CCACCCTTCGCCGGGTCCGCTGAACAGGGAGGCTACCCGCTCCCAGCTGGGGTTGGTGAGAGTGGGACTCGGGGGAAGAAGATGGCCCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371648.4
CDS-3UTR CAA 90 bp CGCAAGCTGGACCCCTTGTTCCGTTCGGCCCGTGAGGAGAACGGAACTGGCGGCGCCGTAGGGCCCTTCTaGCGCAGCACCGTCACCGTG +
Preference number: 5 (lower is better)
Translates to: RKLDPLFRSAREENGTGGAVGPF*RSTVTV
Trigger: CACGGTGACGGTGCTGCGCAAGAAGGGCCCTACGGC...GCCGCCAGTTCCGTTCTCCTCACGGGCCGAACGGAACAAGGGGTCCAGCTTGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224073.6
ENST00000371649.5
CDS-3UTR CAA 90 bp TTCCGTTCGGCCCGTGAGGAGAACGGAACTGGCGGCCAAGGGGAACCGGCGGAATCCTTTCCCCGGAGCTaGAGGCCAATGGCCCGCTCG +
Preference number: 5 (lower is better)
Translates to: FRSAREENGTGGQGEPAESFPRS*RPMARS
Trigger: CGAGCGGGCCATTGGCCTCAAGCTCCGGGGAAAGGA...TTCCGCCGGTTCCCCTTGGCCGCCAGTTCCGTTCTCCTCACGGGCCGAACGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000224073.6
CDS-3UTR CAA 90 bp TTCCGTTCGGCCCGTGAGGAGAACGGAACTGGCGGCCAAGGGGAACCGGCGGAAATAGCCTGCTTGGATTaGGCCTGGGCGGCCGTAGGG +
Preference number: 5 (lower is better)
Translates to: FRSAREENGTGGQGEPAEIACLD*AWAAVG
Trigger: CCCTACGGCCGCCCAGGCCAAATCCAAGCAGGCTAT...TTCCGCCGGTTCCCCTTGGCCGCCAGTTCCGTTCTCCTCACGGGCCGAACGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224073.6
ENST00000371649.5
CDS-3UTR CAA 90 bp CTCCGGAAGAACCGGAGCCGGGGTCCTCTGTGGAACTGGCTTCCGGCCCCATGCGCTAAGATAGCCTGCTaGGATTTGGCCTGGGCGGCC +
Preference number: 5 (lower is better)
Translates to: LRKNRSRGPLWNWLPAPCAKIAC*DLAWAA
Trigger: GGCCGCCCAGGCCAAATCCAAGCAGGCTATCTTAGC...GCATGGGGCCGGAAGCCAGTTCCACAGAGGACCCCGGCTCCGGTTCTTCCGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371648.4
CDS-3UTR CAA 90 bp TTCCGTTCGGCCCGTGAGGAGAACGGAACTGGCGGCCAAGGGGAACCGGCGGAACCTTGCTGGATCACCTaGCCCACCTCCAGGGTCACC +
Preference number: 5 (lower is better)
Translates to: FRSAREENGTGGQGEPAEPCWIT*PTSRVT
Trigger: GGTGACCCTGGAGGTGGGCAAGGTGATCCAGCAAGG...TTCCGCCGGTTCCCCTTGGCCGCCAGTTCCGTTCTCCTCACGGGCCGAACGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224073.6
ENST00000371649.5
CDS-3UTR CAA 90 bp CAGGGCCATCTTCTTCCCCCGAGTCCCACTCTCACCAACCCCAGCTGGGAGCGGCCTTGCTGGATCACCTaGCCCACCTCCAGGGTCACC +
Preference number: 5 (lower is better)
Translates to: QGHLLPPSPTLTNPSWERPCWIT*PTSRVT
Trigger: GGTGACCCTGGAGGTGGGCAAGGTGATCCAGCAAGG...CCGCTCCCAGCTGGGGTTGGTGAGAGTGGGACTCGGGGGAAGAAGATGGCCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371648.4
CDS-3UTR CAA 90 bp AACGGAACTGGCGGCCAAGGGGAACCGGCGGAACGAGATCAGCTGGAGCGCACTCGCAAGCTGGACCCCTaGTTCCGTTCGGCCCGTGAG +
Preference number: 5 (lower is better)
Translates to: NGTGGQGEPAERDQLERTRKLDP*FRSARE
Trigger: CTCACGGGCCGAACGGAACAAGGGGTCCAGCTTGCG...AGTGCGCTCCAGCTGATCTCGTTCCGCCGGTTCCCCTTGGCCGCCAGTTCCGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224073.6
ENST00000371649.5
CDS CCA 90 bp AGCTGGGAGCGGGTAGCCTCCCTGTTCAGCGGACCCGGCGAAGGGTaGAGGGACACTCACCAATGGCCCGCTCGATTTTGCCAAGCACCT +
Preference number: 5 (lower is better)
Translates to: SWERVASLFSGPGEG*RDTHQWPARFCQAP
Trigger: AGGTGCTTGGCAAAATCGAGCGGGCCATTGGTGAGTGTCCCTCCACCCTTCGCCGGGTCCGCTGAACAGGGAGGCTACCCGCTCCCAGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371648.4
CDS-3UTR CAA 90 bp AGGCTGACGGGAACTGGCAAGGGGAAGGGACTCGGACTCCACTTGCTCTTAGGGGCCGTAGGGCCCTTCTaGCGCAGCACCGTCACCGTG +
Preference number: 5 (lower is better)
Translates to: RLTGTGKGKGLGLHLLLGAVGPF*RSTVTV
Trigger: CACGGTGACGGTGCTGCGCAAGAAGGGCCCTACGGC...CCCTAAGAGCAAGTGGAGTCCGAGTCCCTTCCCCTTGCCAGTTCCCGTCAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371648.4
CDS-3UTR CAA 90 bp CCCGTGAGGAGAACGGAACTGGCGGCCAAGGGGAACCGGCGGAACGAGATCAGCGCTAAGATAGCCTGCTaGGATTTGGCCTGGGCGGCC +
Preference number: 5 (lower is better)
Translates to: PVRRTELAAKGNRRNEISAKIAC*DLAWAA
Trigger: GGCCGCCCAGGCCAAATCCAAGCAGGCTATCTTAGC...GCTGATCTCGTTCCGCCGGTTCCCCTTGGCCGCCAGTTCCGTTCTCCTCACGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224073.6
ENST00000371649.5
CDS-3UTR CAA 90 bp CCCCTCTCCGGAAGAACCGGAGCCGGGGTCCTCTGTGGAACTGGCTTCCGGCCCGTCTCCCGGTCCAGCTaGGCCGTGTTCTTGGTAATA +
Preference number: 5 (lower is better)
Translates to: PLSGRTGAGVLCGTGFRPVSRSS*AVFLVI
Trigger: TATTACCAAGAACACGGCCAAGCTGGACCGGGAGAC...GGGCCGGAAGCCAGTTCCACAGAGGACCCCGGCTCCGGTTCTTCCGGAGAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371648.4
CDS-3UTR CAA 90 bp AACGGAACTGGCGGCCAAGGGGAACCGGCGGAACGAGATCAGCTGGAGCGCACTCCTTGCTGGATCACCTaGCCCACCTCCAGGGTCACC +
Preference number: 5 (lower is better)
Translates to: NGTGGQGEPAERDQLERTPCWIT*PTSRVT
Trigger: GGTGACCCTGGAGGTGGGCAAGGTGATCCAGCAAGG...AGTGCGCTCCAGCTGATCTCGTTCCGCCGGTTCCCCTTGGCCGCCAGTTCCGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224073.6
ENST00000371649.5
CDS-3UTR CAA 90 bp TTGTTCCGTTCGGCCCGTGAGGAGAACGGAACTGGCGGCCAAGGGGAACCGGCGCCAAGCACCTGGTTATaGGGTATGGCCCGTCCGCTC +
Preference number: 5 (lower is better)
Translates to: LFRSAREENGTGGQGEPAPSTWL*GMARPL
Trigger: GAGCGGACGGGCCATACCCAATAACCAGGTGCTTGG...CGCCGGTTCCCCTTGGCCGCCAGTTCCGTTCTCCTCACGGGCCGAACGGAACAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224073.6
ENST00000371649.5
CDS-3UTR CAA 90 bp GACCCCTTGTTCCGTTCGGCCCGTGAGGAGAACGGAACTGGCGGCCAAGGGGAACTTGCTCTGCCGACCTaGCTGGATCACCTTGCCCAC +
Preference number: 5 (lower is better)
Translates to: DPLFRSAREENGTGGQGELALPT*LDHLAH
Trigger: GTGGGCAAGGTGATCCAGCAAGGTCGGCAGAGCAAG...TTCCCCTTGGCCGCCAGTTCCGTTCTCCTCACGGGCCGAACGGAACAAGGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224073.6
ENST00000371649.5
CDS-3UTR CAA 90 bp AGGAGAACGGAACTGGCGGCCAAGGGGAACCGGCGGAACGAGATCAGCTGGAGCTTCTGCGTAAGCCCCTaGCTCTGCCGACCTTGCTGG +
Preference number: 5 (lower is better)
Translates to: RRTELAAKGNRRNEISWSFCVSP*LCRPCW
Trigger: CCAGCAAGGTCGGCAGAGCAAGGGGCTTACGCAGAA...GCTCCAGCTGATCTCGTTCCGCCGGTTCCCCTTGGCCGCCAGTTCCGTTCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224073.6
ENST00000371649.5
CDS-3UTR CAA 90 bp AGCTGGACCCCTTGTTCCGTTCGGCCCGTGAGGAGAACGGAACTGGCGGCCAAGCCAAGCACCTGGTTATaGGGTATGGCCCGTCCGCTC +
Preference number: 5 (lower is better)
Translates to: SWTPCSVRPVRRTELAAKPSTWL*GMARPL
Trigger: GAGCGGACGGGCCATACCCAATAACCAGGTGCTTGG...CTTGGCCGCCAGTTCCGTTCTCCTCACGGGCCGAACGGAACAAGGGGTCCAGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224073.6
ENST00000371649.5
CDS-3UTR CAA 90 bp CTCAGGCTCAGAGAACCATCGCCAACAGCACAGGCTGACGGGAACTGGCAAGGGATAGCCTGCTTGGATTaGGCCTGGGCGGCCGTAGGG +
Preference number: 5 (lower is better)
Translates to: LRLREPSPTAQADGNWQGIACLD*AWAAVG
Trigger: CCCTACGGCCGCCCAGGCCAAATCCAAGCAGGCTAT...CCCTTGCCAGTTCCCGTCAGCCTGTGCTGTTGGCGATGGTTCTCTGAGCCTGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371648.4
CDS-3UTR CAA 90 bp GAGAACGGAACTGGCGGCCAAGGGGAACCGGCGGAACGAGATCAGCTGGAGCGCGTCTCCCGGTCCAGCTaGGCCGTGTTCTTGGTAATA +
Preference number: 5 (lower is better)
Translates to: ENGTGGQGEPAERDQLERVSRSS*AVFLVI
Trigger: TATTACCAAGAACACGGCCAAGCTGGACCGGGAGAC...GCGCTCCAGCTGATCTCGTTCCGCCGGTTCCCCTTGGCCGCCAGTTCCGTTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224073.6
ENST00000371649.5
CDS-3UTR CAA 90 bp CGGCCCGTGAGGAGAACGGAACTGGCGGCCAAGGGGAACCGGCGGAACGAGATCATGGCCCGCTCGATTTaGCCAAGCACCTGGTTATTG +
Preference number: 5 (lower is better)
Translates to: RPVRRTELAAKGNRRNEIMARSI*PSTWLL
Trigger: CAATAACCAGGTGCTTGGCAAAATCGAGCGGGCCAT...GATCTCGTTCCGCCGGTTCCCCTTGGCCGCCAGTTCCGTTCTCCTCACGGGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224073.6
ENST00000371649.5
CDS-3UTR CAA 90 bp TTTGTTTGTTTGACAGCAGGAATGGGCTGGGGAGGGTCCCCCGCAAGCTGGACCCGCAAGCTGGACCCCTaGTTCCGTTCGGCCCGTGAG +
Preference number: 5 (lower is better)
Translates to: FVCLTAGMGWGGSPASWTRKLDP*FRSARE
Trigger: CTCACGGGCCGAACGGAACAAGGGGTCCAGCTTGCG...GGTCCAGCTTGCGGGGGACCCTCCCCAGCCCATTCCTGCTGTCAAACAAACAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000224073.6
ENST00000371649.5
CDS CCA 90 bp TCCCTGTTCAGCGGACCCGGCGAAGGGTGGAGGGACACTCACCAATaGCCCGCTCGATTTTGCCAAGCACCTGGTTATTGGGTATGGCCC +
Preference number: 5 (lower is better)
Translates to: SLFSGPGEGWRDTHQ*PARFCQAPGYWVWP
Trigger: GGGCCATACCCAATAACCAGGTGCTTGGCAAAATCGAGCGGGCCATTGGTGAGTGTCCCTCCACCCTTCGCCGGGTCCGCTGAACAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371648.4
CDS-3UTR CAA 90 bp GAACCGGCGGAACGAGATCAGCTGGAGCGCACTGATTTCGAGGCTTTGTGTTCAGCCGTAGGGCCCTTCTaGCGCAGCACCGTCACCGTG +
Preference number: 5 (lower is better)
Translates to: EPAERDQLERTDFEALCSAVGPF*RSTVTV
Trigger: CACGGTGACGGTGCTGCGCAAGAAGGGCCCTACGGC...TGAACACAAAGCCTCGAAATCAGTGCGCTCCAGCTGATCTCGTTCCGCCGGTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371649.5
CDS-3UTR CAA 90 bp ATGAACACCCCTCTCCGGAAGAACCGGAGCCGGGGTCCTCTGTGGAACTGGCTTCTTGCTCTGCCGACCTaGCTGGATCACCTTGCCCAC +
Preference number: 5 (lower is better)
Translates to: MNTPLRKNRSRGPLWNWLLALPT*LDHLAH
Trigger: GTGGGCAAGGTGATCCAGCAAGGTCGGCAGAGCAAG...AAGCCAGTTCCACAGAGGACCCCGGCTCCGGTTCTTCCGGAGAGGGGTGTTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371648.4
CDS-3UTR CAA 90 bp TTCCGTTCGGCCCGTGAGGAGAACGGAACTGGCGGCCAAGGGGAACCGGCGGAAACCTGTGGCTTCTCATaGATTTTCGTGGCCAGGTCC +
Preference number: 5 (lower is better)
Translates to: FRSAREENGTGGQGEPAETCGFS*IFVARS
Trigger: GGACCTGGCCACGAAAATCAATGAGAAGCCACAGGT...TTCCGCCGGTTCCCCTTGGCCGCCAGTTCCGTTCTCCTCACGGGCCGAACGGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224073.6
ENST00000371649.5
CDS-3UTR CAA 90 bp CCCGTGAGGAGAACGGAACTGGCGGCCAAGGGGAACCGGCGGAACGAGATCAGCACCTGTGGCTTCTCATaGATTTTCGTGGCCAGGTCC +
Preference number: 5 (lower is better)
Translates to: PVRRTELAAKGNRRNEISTCGFS*IFVARS
Trigger: GGACCTGGCCACGAAAATCAATGAGAAGCCACAGGT...GCTGATCTCGTTCCGCCGGTTCCCCTTGGCCGCCAGTTCCGTTCTCCTCACGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224073.6
ENST00000371649.5
CDS-3UTR CAA 90 bp CCCTTGTTCCGTTCGGCCCGTGAGGAGAACGGAACTGGCGGCCAAGGGGAACCGATGGCCCGCTCGATTTaGCCAAGCACCTGGTTATTG +
Preference number: 5 (lower is better)
Translates to: PLFRSAREENGTGGQGEPMARSI*PSTWLL
Trigger: CAATAACCAGGTGCTTGGCAAAATCGAGCGGGCCAT...CGGTTCCCCTTGGCCGCCAGTTCCGTTCTCCTCACGGGCCGAACGGAACAAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224073.6
ENST00000371649.5
CDS-3UTR CAA 90 bp TCCGGAAGAACCGGAGCCGGGGTCCTCTGTGGAACTGGCTTCCGGCCCCATGCTATGGCCCGCTCGATTTaGCCAAGCACCTGGTTATTG +
Preference number: 5 (lower is better)
Translates to: SGRTGAGVLCGTGFRPHAMARSI*PSTWLL
Trigger: CAATAACCAGGTGCTTGGCAAAATCGAGCGGGCCAT...AGCATGGGGCCGGAAGCCAGTTCCACAGAGGACCCCGGCTCCGGTTCTTCCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371648.4
CDS GCA 90 bp CCCGGCGAAGGGTGGAGGGACACTCACCAATGGCCCGCTCGATTTTaGCAAGCACCTGGTTATTGGGTATGGCCCGTCCGCTCTCATAGT +
Preference number: 5 (lower is better)
Translates to: PGEGWRDTHQWPARF*QAPGYWVWPVRSHS
Trigger: ACTATGAGAGCGGACGGGCCATACCCAATAACCAGGTGCTTGGCAAAATCGAGCGGGCCATTGGTGAGTGTCCCTCCACCCTTCGCCGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371648.4
CDS-3UTR CAA 90 bp TTGTTCCGTTCGGCCCGTGAGGAGAACGGAACTGGCGGCCAAGGGGAACCGGCGCCAGCAGCCCATTTCTaGGAAGTCTCCACATCTTCT +
Preference number: 5 (lower is better)
Translates to: LFRSAREENGTGGQGEPAPAAHF*EVSTSS
Trigger: AGAAGATGTGGAGACTTCCAAGAAATGGGCTGCTGG...CGCCGGTTCCCCTTGGCCGCCAGTTCCGTTCTCCTCACGGGCCGAACGGAACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224073.6
ENST00000371649.5
CDS-3UTR CAA 90 bp ACTCCACTTGCTCTTAGGGGTTTCCTGAGGCCTGCAGAGACCCCACCATCCCTCTTCTGCGTAAGCCCCTaGCTCTGCCGACCTTGCTGG +
Preference number: 5 (lower is better)
Translates to: TPLALRGFLRPAETPPSLFCVSP*LCRPCW
Trigger: CCAGCAAGGTCGGCAGAGCAAGGGGCTTACGCAGAA...GAGGGATGGTGGGGTCTCTGCAGGCCTCAGGAAACCCCTAAGAGCAAGTGGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371648.4
CDS GCA 90 bp TCATTGATTTTCGTGGCCAGGTCCTTCTGCGTAAGCCCCTTGCTCTaGCGACCTTGCTGGATCACCTTGCCCACCTCCAGGGTCACCCTG +
Preference number: 5 (lower is better)
Translates to: SLIFVARSFCVSPLL*RPCWITLPTSRVTL
Trigger: CAGGGTGACCCTGGAGGTGGGCAAGGTGATCCAGCAAGGTCGGCAGAGCAAGGGGCTTACGCAGAAGGACCTGGCCACGAAAATCAATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224073.6
ENST00000371648.4
ENST00000371649.5
CDS-3UTR CAA 90 bp AAGGGGAACCGGCGGAACGAGATCAGCTGGAGCGCACTGATTTCGAGGCTTTGTGCTAAGATAGCCTGCTaGGATTTGGCCTGGGCGGCC +
Preference number: 5 (lower is better)
Translates to: KGNRRNEISWSALISRLCAKIAC*DLAWAA
Trigger: GGCCGCCCAGGCCAAATCCAAGCAGGCTATCTTAGC...ACAAAGCCTCGAAATCAGTGCGCTCCAGCTGATCTCGTTCCGCCGGTTCCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224073.6
ENST00000371649.5
CDS-3UTR CAA 90 bp GCGGCCAAGGGGAACCGGCGGAACGAGATCAGCTGGAGCGCACTGATTTCGAGGCCAGCAGCCCATTTCTaGGAAGTCTCCACATCTTCT +
Preference number: 5 (lower is better)
Translates to: AAKGNRRNEISWSALISRPAAHF*EVSTSS
Trigger: AGAAGATGTGGAGACTTCCAAGAAATGGGCTGCTGG...CCTCGAAATCAGTGCGCTCCAGCTGATCTCGTTCCGCCGGTTCCCCTTGGCCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224073.6
ENST00000371649.5
CDS-3UTR CAA 90 bp CTCCGGAAGAACCGGAGCCGGGGTCCTCTGTGGAACTGGCTTCCGGCCCCATGCGTAATAGAATGTTGTTaGTTCTGGCCAGCAGCCCAT +
Preference number: 5 (lower is better)
Translates to: LRKNRSRGPLWNWLPAPCVIECC*FWPAAH
Trigger: ATGGGCTGCTGGCCAGAACAAACAACATTCTATTAC...GCATGGGGCCGGAAGCCAGTTCCACAGAGGACCCCGGCTCCGGTTCTTCCGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371648.4
CDS-3UTR CAA 90 bp GAGAACGGAACTGGCGGCCAAGGGGAACCGGCGGAACGAGATCAGCTGGAGCGCACTGATTTCGAGGCTTaGTGTTCATTTCGCCCTAGG +
Preference number: 5 (lower is better)
Translates to: ENGTGGQGEPAERDQLERTDFEA*CSFRPR
Trigger: CCTAGGGCGAAATGAACACAAAGCCTCGAAATCAGT...GCGCTCCAGCTGATCTCGTTCCGCCGGTTCCCCTTGGCCGCCAGTTCCGTTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224073.6
ENST00000371649.5
CDS CCA 90 bp GGCCAATGGCCCGCTCGATTTTGCCAAGCACCTGGTTATTGGGTATaGCCCGTCCGCTCTCATAGTCCGCGATCACCTGTGGCTTCTCAT +
Preference number: 5 (lower is better)
Translates to: GQWPARFCQAPGYWV*PVRSHSPRSPVASH
Trigger: ATGAGAAGCCACAGGTGATCGCGGACTATGAGAGCGGACGGGCCATACCCAATAACCAGGTGCTTGGCAAAATCGAGCGGGCCATTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224073.6
CDS CCA 90 bp GACACTCACCAATGGCCCGCTCGATTTTGCCAAGCACCTGGTTATTaGGTATGGCCCGTCCGCTCTCATAGTCCGCGATCACCTGTGGCT +
Preference number: 5 (lower is better)
Translates to: DTHQWPARFCQAPGY*VWPVRSHSPRSPVA
Trigger: AGCCACAGGTGATCGCGGACTATGAGAGCGGACGGGCCATACCCAATAACCAGGTGCTTGGCAAAATCGAGCGGGCCATTGGTGAGTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371648.4
CDS-3UTR CAA 90 bp CAAGGGGAACCGGCGGAACGAGATCAGCTGGAGCGCACTGATTTCGAGGCTTTGGTCTCCCGGTCCAGCTaGGCCGTGTTCTTGGTAATA +
Preference number: 5 (lower is better)
Translates to: QGEPAERDQLERTDFEALVSRSS*AVFLVI
Trigger: TATTACCAAGAACACGGCCAAGCTGGACCGGGAGAC...CAAAGCCTCGAAATCAGTGCGCTCCAGCTGATCTCGTTCCGCCGGTTCCCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224073.6
ENST00000371649.5
CDS-3UTR CAA 90 bp CCCTTCTCGATGGGCTTTCCAATGTCCTTTCCCCGGAGCTTGAGGCCTGAAATGCTTGCTCTGCCGACCTaGCTGGATCACCTTGCCCAC +
Preference number: 5 (lower is better)
Translates to: PFSMGFPMSFPRSLRPEMLALPT*LDHLAH
Trigger: GTGGGCAAGGTGATCCAGCAAGGTCGGCAGAGCAAG...CATTTCAGGCCTCAAGCTCCGGGGAAAGGACATTGGAAAGCCCATCGAGAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371649.5
CDS CCA 90 bp TTCCCACATCAATGGCCCGCTCGATTTTGCCAAGCACCTGGTTATTaGGTATGGCCCGTCCGCTCTCATAGTCCGCGATCACCTGTGGCT +
Preference number: 5 (lower is better)
Translates to: FPHQWPARFCQAPGY*VWPVRSHSPRSPVA
Trigger: AGCCACAGGTGATCGCGGACTATGAGAGCGGACGGGCCATACCCAATAACCAGGTGCTTGGCAAAATCGAGCGGGCCATTGATGTGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371649.5
CDS CCA 90 bp CACCAATGGCCCGCTCGATTTTGCCAAGCACCTGGTTATTGGGTATaGCCCGTCCGCTCTCATAGTCCGCGATCACCTGTGGCTTCTCAT +
Preference number: 5 (lower is better)
Translates to: HQWPARFCQAPGYWV*PVRSHSPRSPVASH
Trigger: ATGAGAAGCCACAGGTGATCGCGGACTATGAGAGCGGACGGGCCATACCCAATAACCAGGTGCTTGGCAAAATCGAGCGGGCCATTGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371648.4
CDS-3UTR CAA 90 bp GCACAGGCTGACGGGAACTGGCAAGGGGAAGGGACTCGGACTCCACTTGCTCTTCCAGCAGCCCATTTCTaGGAAGTCTCCACATCTTCT +
Preference number: 5 (lower is better)
Translates to: AQADGNWQGEGTRTPLALPAAHF*EVSTSS
Trigger: AGAAGATGTGGAGACTTCCAAGAAATGGGCTGCTGG...AAGAGCAAGTGGAGTCCGAGTCCCTTCCCCTTGCCAGTTCCCGTCAGCCTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371648.4
CDS-3UTR CAA 90 bp ACCCCTTGTTCCGTTCGGCCCGTGAGGAGAACGGAACTGGCGGCCAAGGGGAACGTAATAGAATGTTGTTaGTTCTGGCCAGCAGCCCAT +
Preference number: 5 (lower is better)
Translates to: TPCSVRPVRRTELAAKGNVIECC*FWPAAH
Trigger: ATGGGCTGCTGGCCAGAACAAACAACATTCTATTAC...GTTCCCCTTGGCCGCCAGTTCCGTTCTCCTCACGGGCCGAACGGAACAAGGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224073.6
ENST00000371649.5
CDS-3UTR CAA 90 bp CCTTGTTCCGTTCGGCCCGTGAGGAGAACGGAACTGGCGGCCAAGGGGAACCGGAGCTTGGCCGTGTTCTaGGTAATAGAATGTTGTTTG +
Preference number: 5 (lower is better)
Translates to: PCSVRPVRRTELAAKGNRSLAVF*VIECCL
Trigger: CAAACAACATTCTATTACCAAGAACACGGCCAAGCT...CCGGTTCCCCTTGGCCGCCAGTTCCGTTCTCCTCACGGGCCGAACGGAACAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224073.6
ENST00000371649.5
CDS-3UTR CAA 90 bp GGGCCCGGACCCGCTGTGCTCAGGCTCAGAGAACCATCGCCAACAGCACAGGCTAGCTTGGCCGTGTTCTaGGTAATAGAATGTTGTTTG +
Preference number: 5 (lower is better)
Translates to: GPGPAVLRLREPSPTAQASLAVF*VIECCL
Trigger: CAAACAACATTCTATTACCAAGAACACGGCCAAGCT...AGCCTGTGCTGTTGGCGATGGTTCTCTGAGCCTGAGCACAGCGGGTCCGGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371648.4
CDS-3UTR CAA 90 bp TTCTCGATGGGCTTTCCAATGTCCTTTCCCCGGAGCTTGAGGCCTGAAATGAGCTTCTGCGTAAGCCCCTaGCTCTGCCGACCTTGCTGG +
Preference number: 5 (lower is better)
Translates to: FSMGFPMSFPRSLRPEMSFCVSP*LCRPCW
Trigger: CCAGCAAGGTCGGCAGAGCAAGGGGCTTACGCAGAA...GCTCATTTCAGGCCTCAAGCTCCGGGGAAAGGACATTGGAAAGCCCATCGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371649.5
CDS CCA 90 bp CATCAATGGCCCGCTCGATTTTGCCAAGCACCTGGTTATTGGGTATaGCCCGTCCGCTCTCATAGTCCGCGATCACCTGTGGCTTCTCAT +
Preference number: 5 (lower is better)
Translates to: HQWPARFCQAPGYWV*PVRSHSPRSPVASH
Trigger: ATGAGAAGCCACAGGTGATCGCGGACTATGAGAGCGGACGGGCCATACCCAATAACCAGGTGCTTGGCAAAATCGAGCGGGCCATTGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371649.5
CDS-3UTR CAA 90 bp ACCCCTTGTTCCGTTCGGCCCGTGAGGAGAACGGAACTGGCGGCCAAGGGGAACAGCTTGGCCGTGTTCTaGGTAATAGAATGTTGTTTG +
Preference number: 5 (lower is better)
Translates to: TPCSVRPVRRTELAAKGNSLAVF*VIECCL
Trigger: CAAACAACATTCTATTACCAAGAACACGGCCAAGCT...GTTCCCCTTGGCCGCCAGTTCCGTTCTCCTCACGGGCCGAACGGAACAAGGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000224073.6
ENST00000371649.5
CDS-3UTR CAA 90 bp GATGAGTCTGATCACCTTAGACAGCAGAGCATGAACACCCCTCTCCGGAAGAACCCAAGCACCTGGTTATaGGGTATGGCCCGTCCGCTC +
Preference number: 5 (lower is better)
Translates to: DESDHLRQQSMNTPLRKNPSTWL*GMARPL
Trigger: GAGCGGACGGGCCATACCCAATAACCAGGTGCTTGG...GTTCTTCCGGAGAGGGGTGTTCATGCTCTGCTGTCTAAGGTGATCAGACTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371648.4
CDS-3UTR CAA 90 bp TTCTCGATGGGCTTTCCAATGTCCTTTCCCCGGAGCTTGAGGCCTGAAATGAGCTCCTTTCCCCGGAGCTaGAGGCCTGAAATGAGCCAC +
Preference number: 5 (lower is better)
Translates to: FSMGFPMSFPRSLRPEMSSFPRS*RPEMSH
Trigger: GTGGCTCATTTCAGGCCTCAAGCTCCGGGGAAAGGA...GCTCATTTCAGGCCTCAAGCTCCGGGGAAAGGACATTGGAAAGCCCATCGAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371649.5
CDS-3UTR CAA 90 bp TCTGATCACCTTAGACAGCAGAGCATGAACACCCCTCTCCGGAAGAACCGGAGCACCTGTGGCTTCTCATaGATTTTCGTGGCCAGGTCC +
Preference number: 5 (lower is better)
Translates to: SDHLRQQSMNTPLRKNRSTCGFS*IFVARS
Trigger: GGACCTGGCCACGAAAATCAATGAGAAGCCACAGGT...GCTCCGGTTCTTCCGGAGAGGGGTGTTCATGCTCTGCTGTCTAAGGTGATCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371648.4
CDS-3UTR CAA 90 bp AAGGGGAACCGGCGGAACGAGATCAGCTGGAGCGCACTGATTTCGAGGCTTTGTACTGATTTCGAGGCTTaGTGTTCATTTCGCCCTAGG +
Preference number: 5 (lower is better)
Translates to: KGNRRNEISWSALISRLCTDFEA*CSFRPR
Trigger: CCTAGGGCGAAATGAACACAAAGCCTCGAAATCAGT...ACAAAGCCTCGAAATCAGTGCGCTCCAGCTGATCTCGTTCCGCCGGTTCCCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000224073.6
ENST00000371649.5
CDS-3UTR CAA 90 bp GAGATCAGCTGGAGCGCACTGATTTCGAGGCTTTGTGTTCATTTCGCCCTAGGCGTAATAGAATGTTGTTaGTTCTGGCCAGCAGCCCAT +
Preference number: 5 (lower is better)
Translates to: EISWSALISRLCVHFALGVIECC*FWPAAH
Trigger: ATGGGCTGCTGGCCAGAACAAACAACATTCTATTAC...GCCTAGGGCGAAATGAACACAAAGCCTCGAAATCAGTGCGCTCCAGCTGATCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371649.5
CDS-3UTR CAA 90 bp CCGGCGGAACGAGATCAGCTGGAGCGCACTGATTTCGAGGCTTTGTGTTCATTTTTTGCAAGGTTTTGTTaGTTTGACAGCAGGAATGGG +
Preference number: 5 (lower is better)
Translates to: PAERDQLERTDFEALCSFFARFC*FDSRNG
Trigger: CCCATTCCTGCTGTCAAACAAACAAAACCTTGCAAA...AAATGAACACAAAGCCTCGAAATCAGTGCGCTCCAGCTGATCTCGTTCCGCCGG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000371649.5
CDS CCA 72 bp GCAGCACCGTCACCGTGTCCCAGTCGCTCTCGGCCATaGCGGGCGAAGACGAGCGTCCGTCCGGCGGCTCAG +
Preference number: 6 (lower is better)
Translates to: AAPSPCPSRSRP*RAKTSVRPAAQ
Trigger: CTGAGCCGCCGGACGGACGCTCGTCTTCGCCCGCCATGGCCGAGAGCGACTGGGACACGGTGACGGTGCTGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000224073.6
CDS CCA 72 bp CTTCTTCCCCCGAGTCCCACTCTCACCAACCCCAGCTaGGAGCGGGTAGCCTCCCTGTTCAGCGGACCCGGC +
Preference number: 6 (lower is better)
Translates to: LLPPSPTLTNPS*ERVASLFSGPG
Trigger: GCCGGGTCCGCTGAACAGGGAGGCTACCCGCTCCCAGCTGGGGTTGGTGAGAGTGGGACTCGGGGGAAGAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371648.4
CDS CAA 72 bp TGCTTGGATTTGGCCTGGGCGGCCGTAGGGCCCTTCTaGCGCAGCACCGTCACCGTGTCCCAGTCGCTCTCG +
Preference number: 6 (lower is better)
Translates to: CLDLAWAAVGPF*RSTVTVSQSLS
Trigger: CGAGAGCGACTGGGACACGGTGACGGTGCTGCGCAAGAAGGGCCCTACGGCCGCCCAGGCCAAATCCAAGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224073.6
ENST00000371648.4
ENST00000371649.5
CDS CAA 90 bp AAGATAGCCTGCTTGGATTTGGCCTGGGCGGCCGTAGGGCCCTTCTaGCGCAGCACCGTCACCGTGTCCCAGTCGCTCTCGGCCATGGCG +
Preference number: 6 (lower is better)
Translates to: KIACLDLAWAAVGPF*RSTVTVSQSLSAMA
Trigger: CGCCATGGCCGAGAGCGACTGGGACACGGTGACGGTGCTGCGCAAGAAGGGCCCTACGGCCGCCCAGGCCAAATCCAAGCAGGCTATCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224073.6
ENST00000371648.4
ENST00000371649.5
CDS CCA 72 bp CGGGTAGCCTCCCTGTTCAGCGGACCCGGCGAAGGGTaGAGGGACACTCACCAATGGCCCGCTCGATTTTGC +
Preference number: 6 (lower is better)
Translates to: RVASLFSGPGEG*RDTHQWPARFC
Trigger: GCAAAATCGAGCGGGCCATTGGTGAGTGTCCCTCCACCCTTCGCCGGGTCCGCTGAACAGGGAGGCTACCCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371648.4
CDS CCA 72 bp CTCTGTGCCGCTAAGATAGCCTGCTTGGATTTGGCCTaGGCGGCCGTAGGGCCCTTCTTGCGCAGCACCGTC +
Preference number: 6 (lower is better)
Translates to: LCAAKIACLDLA*AAVGPFLRSTV
Trigger: GACGGTGCTGCGCAAGAAGGGCCCTACGGCCGCCCAGGCCAAATCCAAGCAGGCTATCTTAGCGGCACAGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224073.6
ENST00000371648.4
ENST00000371649.5
CDS GCA 72 bp AGGTCCTTCTGCGTAAGCCCCTTGCTCTGCCGACCTTaGTGGATCACCTTGCCCACCTCCAGGGTCACCCTG +
Preference number: 6 (lower is better)
Translates to: RSFCVSPLLCRP*WITLPTSRVTL
Trigger: CAGGGTGACCCTGGAGGTGGGCAAGGTGATCCAGCAAGGTCGGCAGAGCAAGGGGCTTACGCAGAAGGACCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224073.6
ENST00000371648.4
ENST00000371649.5
CDS GCA 72 bp TTCGTGGCCAGGTCCTTCTGCGTAAGCCCCTTGCTCTaGCGACCTTGCTGGATCACCTTGCCCACCTCCAGG +
Preference number: 6 (lower is better)
Translates to: FVARSFCVSPLL*RPCWITLPTSR
Trigger: CCTGGAGGTGGGCAAGGTGATCCAGCAAGGTCGGCAGAGCAAGGGGCTTACGCAGAAGGACCTGGCCACGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224073.6
ENST00000371648.4
ENST00000371649.5
CDS CAA 72 bp CAGGTCCTTCTGCGTAAGCCCCTTGCTCTGCCGACCTaGCTGGATCACCTTGCCCACCTCCAGGGTCACCCT +
Preference number: 6 (lower is better)
Translates to: QVLLRKPLALPT*LDHLAHLQGHP
Trigger: AGGGTGACCCTGGAGGTGGGCAAGGTGATCCAGCAAGGTCGGCAGAGCAAGGGGCTTACGCAGAAGGACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224073.6
ENST00000371648.4
ENST00000371649.5
CDS CAA 90 bp TCCTTCTGCGTAAGCCCCTTGCTCTGCCGACCTTGCTGGATCACCTaGCCCACCTCCAGGGTCACCCTGTCATGGTGCAGCTCCTCTGTC +
Preference number: 6 (lower is better)
Translates to: SFCVSPLLCRPCWIT*PTSRVTLSWCSSSV
Trigger: GACAGAGGAGCTGCACCATGACAGGGTGACCCTGGAGGTGGGCAAGGTGATCCAGCAAGGTCGGCAGAGCAAGGGGCTTACGCAGAAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224073.6
ENST00000371648.4
ENST00000371649.5
CDS GCA 72 bp GGGTGGAGGGACACTCACCAATGGCCCGCTCGATTTTaGCAAGCACCTGGTTATTGGGTATGGCCCGTCCGC +
Preference number: 6 (lower is better)
Translates to: GWRDTHQWPARF*QAPGYWVWPVR
Trigger: GCGGACGGGCCATACCCAATAACCAGGTGCTTGGCAAAATCGAGCGGGCCATTGGTGAGTGTCCCTCCACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371648.4
CDS CCA 72 bp AGCGGACCCGGCGAAGGGTGGAGGGACACTCACCAATaGCCCGCTCGATTTTGCCAAGCACCTGGTTATTGG +
Preference number: 6 (lower is better)
Translates to: SGPGEGWRDTHQ*PARFCQAPGYW
Trigger: CCAATAACCAGGTGCTTGGCAAAATCGAGCGGGCCATTGGTGAGTGTCCCTCCACCCTTCGCCGGGTCCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371648.4
CDS CAA 72 bp TTTCCCCGGAGCTTGAGGCCAATGGCCCGCTCGATTTaGCCAAGCACCTGGTTATTGGGTATGGCCCGTCCG +
Preference number: 6 (lower is better)
Translates to: FPRSLRPMARSI*PSTWLLGMARP
Trigger: CGGACGGGCCATACCCAATAACCAGGTGCTTGGCAAAATCGAGCGGGCCATTGGCCTCAAGCTCCGGGGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000224073.6
CDS CAA 72 bp AGGGTGGAGGGACACTCACCAATGGCCCGCTCGATTTaGCCAAGCACCTGGTTATTGGGTATGGCCCGTCCG +
Preference number: 6 (lower is better)
Translates to: RVEGHSPMARSI*PSTWLLGMARP
Trigger: CGGACGGGCCATACCCAATAACCAGGTGCTTGGCAAAATCGAGCGGGCCATTGGTGAGTGTCCCTCCACCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371648.4
CDS CAA 90 bp GGCTTCTCATTGATTTTCGTGGCCAGGTCCTTCTGCGTAAGCCCCTaGCTCTGCCGACCTTGCTGGATCACCTTGCCCACCTCCAGGGTC +
Preference number: 6 (lower is better)
Translates to: GFSLIFVARSFCVSP*LCRPCWITLPTSRV
Trigger: GACCCTGGAGGTGGGCAAGGTGATCCAGCAAGGTCGGCAGAGCAAGGGGCTTACGCAGAAGGACCTGGCCACGAAAATCAATGAGAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224073.6
ENST00000371648.4
ENST00000371649.5
CDS GCA 72 bp CACTCCTGGTTCCCACATCAATGGCCCGCTCGATTTTaGCAAGCACCTGGTTATTGGGTATGGCCCGTCCGC +
Preference number: 6 (lower is better)
Translates to: HSWFPHQWPARF*QAPGYWVWPVR
Trigger: GCGGACGGGCCATACCCAATAACCAGGTGCTTGGCAAAATCGAGCGGGCCATTGATGTGGGAACCAGGAGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371649.5
CDS CCA 72 bp CCCGCTCGATTTTGCCAAGCACCTGGTTATTGGGTATaGCCCGTCCGCTCTCATAGTCCGCGATCACCTGTG +
Preference number: 6 (lower is better)
Translates to: PARFCQAPGYWV*PVRSHSPRSPV
Trigger: CACAGGTGATCGCGGACTATGAGAGCGGACGGGCCATACCCAATAACCAGGTGCTTGGCAAAATCGAGCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224073.6
ENST00000371648.4
ENST00000371649.5
CDS CAA 72 bp TTGATTTTCGTGGCCAGGTCCTTCTGCGTAAGCCCCTaGCTCTGCCGACCTTGCTGGATCACCTTGCCCACC +
Preference number: 6 (lower is better)
Translates to: LIFVARSFCVSP*LCRPCWITLPT
Trigger: GGTGGGCAAGGTGATCCAGCAAGGTCGGCAGAGCAAGGGGCTTACGCAGAAGGACCTGGCCACGAAAATCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224073.6
ENST00000371648.4
ENST00000371649.5
CDS CAA 72 bp GCACTCCTGGTTCCCACATCAATGGCCCGCTCGATTTaGCCAAGCACCTGGTTATTGGGTATGGCCCGTCCG +
Preference number: 6 (lower is better)
Translates to: ALLVPTSMARSI*PSTWLLGMARP
Trigger: CGGACGGGCCATACCCAATAACCAGGTGCTTGGCAAAATCGAGCGGGCCATTGATGTGGGAACCAGGAGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371649.5
CDS CCA 72 bp CAATGGCCCGCTCGATTTTGCCAAGCACCTGGTTATTaGGTATGGCCCGTCCGCTCTCATAGTCCGCGATCA +
Preference number: 6 (lower is better)
Translates to: QWPARFCQAPGY*VWPVRSHSPRS
Trigger: TGATCGCGGACTATGAGAGCGGACGGGCCATACCCAATAACCAGGTGCTTGGCAAAATCGAGCGGGCCATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224073.6
ENST00000371648.4
ENST00000371649.5
CDS GCA 72 bp TGTGGCTTCTCATTGATTTTCGTGGCCAGGTCCTTCTaGGTAAGCCCCTTGCTCTGCCGACCTTGCTGGATC +
Preference number: 6 (lower is better)
Translates to: CGFSLIFVARSF*VSPLLCRPCWI
Trigger: GATCCAGCAAGGTCGGCAGAGCAAGGGGCTTACGCAGAAGGACCTGGCCACGAAAATCAATGAGAAGCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000224073.6
ENST00000371648.4
ENST00000371649.5
CDS CCA 72 bp TATGGCCCGTCCGCTCTCATAGTCCGCGATCACCTGTaGCTTCTCATTGATTTTCGTGGCCAGGTCCTTCTG +
Preference number: 6 (lower is better)
Translates to: YGPSALIVRDHL*LLIDFRGQVLL
Trigger: CAGAAGGACCTGGCCACGAAAATCAATGAGAAGCCACAGGTGATCGCGGACTATGAGAGCGGACGGGCCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000224073.6
ENST00000371648.4
ENST00000371649.5
CDS CAA 72 bp AGCTCCTCTGTCTCCCGGTCCAGCTTGGCCGTGTTCTaGGTAATAGAATGTTGTTTGTTCTGGCCAGCAGCC +
Preference number: 6 (lower is better)
Translates to: SSSVSRSSLAVF*VIECCLFWPAA
Trigger: GGCTGCTGGCCAGAACAAACAACATTCTATTACCAAGAACACGGCCAAGCTGGACCGGGAGACAGAGGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224073.6
ENST00000371648.4
ENST00000371649.5
CDS CAA 90 bp TCATGGTGCAGCTCCTCTGTCTCCCGGTCCAGCTTGGCCGTGTTCTaGGTAATAGAATGTTGTTTGTTCTGGCCAGCAGCCCATTTCTTG +
Preference number: 6 (lower is better)
Translates to: SWCSSSVSRSSLAVF*VIECCLFWPAAHFL
Trigger: CAAGAAATGGGCTGCTGGCCAGAACAAACAACATTCTATTACCAAGAACACGGCCAAGCTGGACCGGGAGACAGAGGAGCTGCACCATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224073.6
ENST00000371648.4
ENST00000371649.5
CDS CAA 90 bp CTCTGTCTCCCGGTCCAGCTTGGCCGTGTTCTTGGTAATAGAATGTaGTTTGTTCTGGCCAGCAGCCCATTTCTTGGAAGTCTCCACATC +
Preference number: 6 (lower is better)
Translates to: LCLPVQLGRVLGNRM*FVLASSPFLGSLHI
Trigger: GATGTGGAGACTTCCAAGAAATGGGCTGCTGGCCAGAACAAACAACATTCTATTACCAAGAACACGGCCAAGCTGGACCGGGAGACAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224073.6
ENST00000371648.4
ENST00000371649.5
CDS CAA 72 bp CTGTCATGGTGCAGCTCCTCTGTCTCCCGGTCCAGCTaGGCCGTGTTCTTGGTAATAGAATGTTGTTTGTTC +
Preference number: 6 (lower is better)
Translates to: LSWCSSSVSRSS*AVFLVIECCLF
Trigger: GAACAAACAACATTCTATTACCAAGAACACGGCCAAGCTGGACCGGGAGACAGAGGAGCTGCACCATGACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224073.6
ENST00000371648.4
ENST00000371649.5
CDS CAA 72 bp CCGGTCCAGCTTGGCCGTGTTCTTGGTAATAGAATGTaGTTTGTTCTGGCCAGCAGCCCATTTCTTGGAAGT +
Preference number: 6 (lower is better)
Translates to: PVQLGRVLGNRM*FVLASSPFLGS
Trigger: ACTTCCAAGAAATGGGCTGCTGGCCAGAACAAACAACATTCTATTACCAAGAACACGGCCAAGCTGGACCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000224073.6
ENST00000371648.4
ENST00000371649.5