Pregenerated sensors for EDEM2 (Homo sapiens)
Ensembl gene IDs: ENSG00000088298Ensembl transcript IDs: ENST00000374491.3, ENST00000374492.8
Found 22 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GCGGGATCTGGCGCGGAGCCGTCGGGACCTGGCGCACCATGGTGCTaGGGCAGCAGCGCGCACAGGAGGCCGAGCGGGATGAGCAGCCGG | + |
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Preference number: 5 (lower is better) Translates to: AGSGAEPSGPGAPWC*GSSAHRRPSGMSSR Trigger: CCGGCTGCTCATCCCGCTCGGCCTCCTGTGCGCGCTGCTGCCTCAGCACCATGGTGCGCCAGGTCCCGACGGCTCCGCGCCAGATCCCGC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000374491.3 ENST00000374492.8 |
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| CDS GCA 90 bp | CTCCTGGGTTCACGCCATGAAGTAAGTTCACTGTTCCATATGGCATaGCAGTGGGGGTCTGAAAGGCTGGGAGGAGTTTTCGGGCCGCCT | + |
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Preference number: 5 (lower is better) Translates to: LLGSRHEVSSLFHMA*QWGSERLGGVFGPP Trigger: AGGCGGCCCGAAAACTCCTCCCAGCCTTTCAGACCCCCACTGGCATGCCATATGGAACAGTGAACTTACTTCATGGCGTGAACCCAGGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000374491.3 ENST00000374492.8 |
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| CDS GCA 90 bp | GAGGCTGCTCAGGGTGGCAAATTCAACAATGAAGGTCCCAATCCCTaGCGTACAGGTGACAGGGGTCTCTCCTGGGTTCACGCCATGAAG | + |
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Preference number: 5 (lower is better) Translates to: EAAQGGKFNNEGPNP*RTGDRGLSWVHAMK Trigger: CTTCATGGCGTGAACCCAGGAGAGACCCCTGTCACCTGTACGGCAGGGATTGGGACCTTCATTGTTGAATTTGCCACCCTGAGCAGCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000374491.3 ENST00000374492.8 |
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| CDS CCA 90 bp | GAGGCTCTGAAGACCAGGCCAGTAGGCCTCCAAGGACTGGAAGACTaGCATGGACACAGTCCCCTTGTACATCTGAACCCACAGGTACCA | + |
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Preference number: 5 (lower is better) Translates to: EALKTRPVGLQGLED*HGHSPLVHLNPQVP Trigger: TGGTACCTGTGGGTTCAGATGTACAAGGGGACTGTGTCCATGCCAGTCTTCCAGTCCTTGGAGGCCTACTGGCCTGGTCTTCAGAGCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000374491.3 ENST00000374492.8 |
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| CDS TCA 90 bp | TTAGAGTCAGAGAAAAACTGCCCCAGGTGTCGTGCCCGTCACAGGTaGGAGGTCGCAGCTCATCGAAGGGAAAGGCATTCTCCAGGTAGC | + |
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Preference number: 5 (lower is better) Translates to: LESEKNCPRCRARHR*EVAAHRRERHSPGS Trigger: GCTACCTGGAGAATGCCTTTCCCTTCGATGAGCTGCGACCTCTCACCTGTGACGGGCACGACACCTGGGGCAGTTTTTCTCTGACTCTAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374492.8 |
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| CDS CCA 90 bp | TCTGAAGACCAGGCCAGTAGGCCTCCAAGGACTGGAAGACTGGCATaGACACAGTCCCCTTGTACATCTGAACCCACAGGTACCAGTCAT | + |
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Preference number: 5 (lower is better) Translates to: SEDQASRPPRTGRLA*TQSPCTSEPTGTSH Trigger: ATGACTGGTACCTGTGGGTTCAGATGTACAAGGGGACTGTGTCCATGCCAGTCTTCCAGTCCTTGGAGGCCTACTGGCCTGGTCTTCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000374491.3 ENST00000374492.8 |
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| CDS CCA 90 bp | GATCACCGCGTCGAAGGTGGACCCATTGTTGTGGATGAAGTTGGTTaGGTCAAACAGGAGGTAGAGGTATTTCACAGTCTCGGCCAGGAA | + |
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Preference number: 5 (lower is better) Translates to: DHRVEGGPIVVDEVG*VKQEVEVFHSLGQE Trigger: TTCCTGGCCGAGACTGTGAAATACCTCTACCTCCTGTTTGACCCAACCAACTTCATCCACAACAATGGGTCCACCTTCGACGCGGTGATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000374491.3 ENST00000374492.8 |
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| CDS CCA 90 bp | TCAAACACAGAGGCGTTCACATCAATATCAAAGTCCACGCTGTCCTaGAGCACTTCAACCACTCTTTGGAATTCTGAGACATTCCCCAAA | + |
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Preference number: 5 (lower is better) Translates to: SNTEAFTSISKSTLS*STSTTLWNSETFPK Trigger: TTTGGGGAATGTCTCAGAATTCCAAAGAGTGGTTGAAGTGCTCCAGGACAGCGTGGACTTTGATATTGATGTGAACGCCTCTGTGTTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000374491.3 ENST00000374492.8 |
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| CDS CCA 72 bp | CTTGGAGGTGAAGGGCTGACTGGGGCAGCTGAGAAGTaGGACCTTCTGTTTGGCAGGCTTCCTCTCCCTTGC | + |
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Preference number: 6 (lower is better) Translates to: LGGEGLTGAAEK*DLLFGRLPLPC Trigger: GCAAGGGAGAGGAAGCCTGCCAAACAGAAGGTCCCACTTCTCAGCTGCCCCAGTCAGCCCTTCACCTCCAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000374491.3 ENST00000374492.8 |
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| CDS GCA 72 bp | GAGGGTGGGATCCCCCGTGGCACGGTAGAGGTACATTaGGCTTTCAATAAGTTCTGGCCGAAGTGGGTAGCC | + |
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Preference number: 6 (lower is better) Translates to: EGGIPRGTVEVH*AFNKFWPKWVA Trigger: GGCTACCCACTTCGGCCAGAACTTATTGAAAGCGCAATGTACCTCTACCGTGCCACGGGGGATCCCACCCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000374491.3 ENST00000374492.8 |
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| CDS CCA 72 bp | TGGATTCCACAGCATCTCTTCCGAGTTCTAGGAGGGTaGGATCCCCCGTGGCACGGTAGAGGTACATTGCGC | + |
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Preference number: 6 (lower is better) Translates to: WIPQHLFRVLGG*DPPWHGRGTLR Trigger: GCGCAATGTACCTCTACCGTGCCACGGGGGATCCCACCCTCCTAGAACTCGGAAGAGATGCTGTGGAATCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000374491.3 ENST00000374492.8 |
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| CDS TCA 72 bp | GAGAAAAACTGCCCCAGGTGTCGTGCCCGTCACAGGTaGGAGGTCGCAGCTCATCGAAGGGAAAGGCATTCT | + |
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Preference number: 6 (lower is better) Translates to: EKNCPRCRARHR*EVAAHRRERHS Trigger: AGAATGCCTTTCCCTTCGATGAGCTGCGACCTCTCACCTGTGACGGGCACGACACCTGGGGCAGTTTTTCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000374492.8 |
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| CDS CCA 72 bp | CAGGCCAGTAGGCCTCCAAGGACTGGAAGACTGGCATaGACACAGTCCCCTTGTACATCTGAACCCACAGGT | + |
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Preference number: 6 (lower is better) Translates to: QASRPPRTGRLA*TQSPCTSEPTG Trigger: ACCTGTGGGTTCAGATGTACAAGGGGACTGTGTCCATGCCAGTCTTCCAGTCCTTGGAGGCCTACTGGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000374491.3 ENST00000374492.8 |
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| CDS GCA 72 bp | CAGGGTGGCAAATTCAACAATGAAGGTCCCAATCCCTaGCGTACAGGTGACAGGGGTCTCTCCTGGGTTCAC | + |
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Preference number: 6 (lower is better) Translates to: QGGKFNNEGPNP*RTGDRGLSWVH Trigger: GTGAACCCAGGAGAGACCCCTGTCACCTGTACGGCAGGGATTGGGACCTTCATTGTTGAATTTGCCACCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000374491.3 ENST00000374492.8 |
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| CDS CCA 72 bp | AAGACCAGGCCAGTAGGCCTCCAAGGACTGGAAGACTaGCATGGACACAGTCCCCTTGTACATCTGAACCCA | + |
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Preference number: 6 (lower is better) Translates to: KTRPVGLQGLED*HGHSPLVHLNP Trigger: TGGGTTCAGATGTACAAGGGGACTGTGTCCATGCCAGTCTTCCAGTCCTTGGAGGCCTACTGGCCTGGTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000374491.3 ENST00000374492.8 |
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| CDS CCA 72 bp | CATGAAGTAAGTTCACTGTTCCATATGGCATGCCAGTaGGGGTCTGAAAGGCTGGGAGGAGTTTTCGGGCCG | + |
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Preference number: 6 (lower is better) Translates to: HEVSSLFHMACQ*GSERLGGVFGP Trigger: CGGCCCGAAAACTCCTCCCAGCCTTTCAGACCCCCACTGGCATGCCATATGGAACAGTGAACTTACTTCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000374491.3 ENST00000374492.8 |
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| CDS TCA 72 bp | GTACAGGTGACAGGGGTCTCTCCTGGGTTCACGCCATaGAGTAAGTTCACTGTTCCATATGGCATGCCAGTG | + |
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Preference number: 6 (lower is better) Translates to: VQVTGVSPGFTP*SKFTVPYGMPV Trigger: CACTGGCATGCCATATGGAACAGTGAACTTACTTCATGGCGTGAACCCAGGAGAGACCCCTGTCACCTGTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000374491.3 ENST00000374492.8 |
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| CDS CAA 72 bp | GAAGTGGGACCTTCTGTTTGGCAGGCTTCCTCTCCCTaGCCTGGTCATGGTTTTCTGGTGAGAAGAGTGTTC | + |
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Preference number: 6 (lower is better) Translates to: EVGPSVWQASSP*PGHGFLVRRVF Trigger: GAACACTCTTCTCACCAGAAAACCATGACCAGGCAAGGGAGAGGAAGCCTGCCAAACAGAAGGTCCCACTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000374491.3 ENST00000374492.8 |
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| CDS GCA 72 bp | TCACGCCATGAAGTAAGTTCACTGTTCCATATGGCATaGCAGTGGGGGTCTGAAAGGCTGGGAGGAGTTTTC | + |
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Preference number: 6 (lower is better) Translates to: SRHEVSSLFHMA*QWGSERLGGVF Trigger: GAAAACTCCTCCCAGCCTTTCAGACCCCCACTGGCATGCCATATGGAACAGTGAACTTACTTCATGGCGTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000374491.3 ENST00000374492.8 |
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| CDS CAA 72 bp | TTCACAGTCTCGGCCAGGAAGAACGACTCCATGCGGTaGTCCAGCTTGTGGTCTCGCAGATCTTTGATTGTT | + |
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Preference number: 6 (lower is better) Translates to: FTVSARKNDSMR*SSLWSRRSLIV Trigger: AACAATCAAAGATCTGCGAGACCACAAGCTGGACAACCGCATGGAGTCGTTCTTCCTGGCCGAGACTGTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000374491.3 ENST00000374492.8 |
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| CDS TCA 72 bp | TCCGGATGGCTTTGTTATACTCTAGGAACATGGCCATaGGCTTCTTATCCTGAAGCAGGATGGCTCCTTTCA | + |
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Preference number: 6 (lower is better) Translates to: SGWLCYTLGTWP*ASYPEAGWLLS Trigger: TGAAAGGAGCCATCCTGCTTCAGGATAAGAAGCTCATGGCCATGTTCCTAGAGTATAACAAAGCCATCCGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000374491.3 ENST00000374492.8 |
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| CDS CCA 72 bp | GAGGCGTTCACATCAATATCAAAGTCCACGCTGTCCTaGAGCACTTCAACCACTCTTTGGAATTCTGAGACA | + |
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Preference number: 6 (lower is better) Translates to: EAFTSISKSTLS*STSTTLWNSET Trigger: TGTCTCAGAATTCCAAAGAGTGGTTGAAGTGCTCCAGGACAGCGTGGACTTTGATATTGATGTGAACGCCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000374491.3 ENST00000374492.8 |
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