Pregenerated sensors for EDDM3A (Homo sapiens)

Ensembl gene IDs: ENSG00000181562

Ensembl transcript IDs: ENST00000326842.3

Found 8 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR-3UTR TCA 90 bp	TATTACAGATACAGAAACCACACAAAGATTTGGTATCAAGAAATCACGAGGTACGTAGTTGGAAAACACTaGCACATAAATGTAAGCGGG	+
Preference number: 2 (lower is better) Translates to: YYRYRNHTKIWYQEITRYVVGKH*HINVSG Trigger: CCCGCTTACATTTATGTGTCAGTGTTTTCCAACTAC...GTACCTCGTGATTTCTTGATACCAAATCTTTGTGTGGTTTCTGTATCTGTAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000326842.3
CDS-3UTR TCA 90 bp	CAGATACAGAAACCACACAAAGATTTGGTATCAAGAAATCACGAGGTACATAAACGCTCCCCTTCTCATTaGTGCATGCACGCTGAATTT	+
Preference number: 4 (lower is better) Translates to: QIQKPHKDLVSRNHEVHKRSPSH*CMHAEF Trigger: AAATTCAGCGTGCATGCATCAATGAGAAGGGGAGCG...TTTATGTACCTCGTGATTTCTTGATACCAAATCTTTGTGTGGTTTCTGTATCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000326842.3
CDS-3UTR TCA 90 bp	ATTACAGATACAGAAACCACACAAAGATTTGGTATCAAGAAATCACGAGGTACATTGATGCATGCACGCTaGATTTTGAACCATAAGCTA	+
Preference number: 4 (lower is better) Translates to: ITDTETTQRFGIKKSRGTLMHAR*ILNHKL Trigger: TAGCTTATGGTTCAAAATTCAGCGTGCATGCATCAA...TGTACCTCGTGATTTCTTGATACCAAATCTTTGTGTGGTTTCTGTATCTGTAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000326842.3
CDS-3UTR GCA 90 bp	TATTACAGATACAGAAACCACACAAAGATTTGGTATCAAGAAATCACGAGGTACCTTCTCATTGATGCATaGACGCTGAATTTTGAACCA	+
Preference number: 4 (lower is better) Translates to: YYRYRNHTKIWYQEITRYLLIDA*TLNFEP Trigger: TGGTTCAAAATTCAGCGTGCATGCATCAATGAGAAG...GTACCTCGTGATTTCTTGATACCAAATCTTTGTGTGGTTTCTGTATCTGTAATA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000326842.3
CDS-3UTR GCA 90 bp	TATTACAGATACAGAAACCACACAAAGATTTGGTATCAAGAAATCACGAGGTACACATATGAAAGCTCTTaGCTTTCAGAGCCTCTTTTT	+
Preference number: 4 (lower is better) Translates to: YYRYRNHTKIWYQEITRYTYESS*LSEPLF Trigger: AAAAAGAGGCTCTGAAAGGCAAGAGCTTTCATATGT...GTACCTCGTGATTTCTTGATACCAAATCTTTGTGTGGTTTCTGTATCTGTAATA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000326842.3
CDS-3UTR CCA 90 bp	ATTACAGATACAGAAACCACACAAAGATTTGGTATCAAGAAATCACGAGGTACAAACCACACAAAGATTTaGTATCAAGAAATCACGAGG	+
Preference number: 4 (lower is better) Translates to: ITDTETTQRFGIKKSRGTNHTKI*YQEITR Trigger: CCTCGTGATTTCTTGATACCAAATCTTTGTGTGGTT...TGTACCTCGTGATTTCTTGATACCAAATCTTTGTGTGGTTTCTGTATCTGTAAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000326842.3
CDS-3UTR CAA 90 bp	ATTACAGATACAGAAACCACACAAAGATTTGGTATCAAGAAATCACGAGGTACAACCTGCGTGTCCTACTaGGACTCTGAGTTCAGGTCA	+
Preference number: 5 (lower is better) Translates to: ITDTETTQRFGIKKSRGTTCVSY*DSEFRS Trigger: TGACCTGAACTCAGAGTCCAAGTAGGACACGCAGGT...TGTACCTCGTGATTTCTTGATACCAAATCTTTGTGTGGTTTCTGTATCTGTAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000326842.3
CDS-3UTR CAA 90 bp	ATTACAGATACAGAAACCACACAAAGATTTGGTATCAAGAAATCACGAGGTACAAAACCACACAAAGATTaGGTATCAAGAAATCACGAG	+
Preference number: 5 (lower is better) Translates to: ITDTETTQRFGIKKSRGTKPHKD*VSRNHE Trigger: CTCGTGATTTCTTGATACCAAATCTTTGTGTGGTTT...TGTACCTCGTGATTTCTTGATACCAAATCTTTGTGTGGTTTCTGTATCTGTAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000326842.3