RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EDARADD (Homo sapiens)

Ensembl gene IDs: ENSG00000186197

Ensembl transcript IDs: ENST00000334232.9, ENST00000359362.6, ENST00000439430.5, ENST00000637660.1, ENST00000642595.1

Found 234 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AAATCTTTACCGTATTTCAGAGAGAGGATAATTTTATCTTCAACGTaGCATGAATCCATTCCGATTGTAGGACTTTGGCCCTTAGAGGAT +
Preference number: 1 (lower is better)
Translates to: KSLPYFRERIILSST*HESIPIVGLWPLED
Trigger: ATCCTCTAAGGGCCAAAGTCCTACAATCGGAATGGATTCATGCCACGTTGAAGATAAAATTATCCTCTCTCTGAAATACGGTAAAGATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
3UTR-3UTR GCA 90 bp ACCTGCCTCAGGGGAAGATTCAGGGGTCACTGGGCTTGGTTCTTCTGGTCTAGGCCACCGGCCCAGGGGTaGCAGCAGGCCCAGAGTGTG +
Preference number: 2 (lower is better)
Translates to: TCLRGRFRGHWAWFFWSRPPAQG*QQAQSV
Trigger: CACACTCTGGGCCTGCTGGCACCCCTGGGCCGGTGG...CCTAGACCAGAAGAACCAAGCCCAGTGACCCCTGAATCTTCCCCTGAGGCAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000642595.1
3UTR-3UTR TCA 90 bp CCGGAGATGACACTGGAGGGTCACGTGGCTCCGGTGATTTGGGCCAATTACATGAAGGGGCACCAGTCTTaGGCTGCCCAGGTCACAGCC +
Preference number: 2 (lower is better)
Translates to: PEMTLEGHVAPVIWANYMKGHQS*AAQVTA
Trigger: GGCTGTGACCTGGGCAGCTCAAGACTGGTGCCCCTT...CATGTAATTGGCCCAAATCACCGGAGCCACGTGACCCTCCAGTGTCATCTCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334232.9
ENST00000359362.6
3UTR-3UTR GCA 90 bp CCGGAGATGACACTGGAGGGTCACGTGGCTCCGGTGATTTGGGCCAATTACATGTGGCCTGGGCCAGCTTaGACGCCTGAAGGGACTCAG +
Preference number: 2 (lower is better)
Translates to: PEMTLEGHVAPVIWANYMWPGPA*TPEGTQ
Trigger: CTGAGTCCCTTCAGGCGTGCAAGCTGGCCCAGGCCA...CATGTAATTGGCCCAAATCACCGGAGCCACGTGACCCTCCAGTGTCATCTCCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334232.9
ENST00000359362.6
3UTR-3UTR TCA 90 bp CCGGAGATGACACTGGAGGGTCACGTGGCTCCGGTGATTTGGGCCAATTACATGAGCCAGACAGTCAGGTaGGATGTACCTGGTGGGGTC +
Preference number: 2 (lower is better)
Translates to: PEMTLEGHVAPVIWANYMSQTVR*DVPGGV
Trigger: GACCCCACCAGGTACATCTCACCTGACTGTCTGGCT...CATGTAATTGGCCCAAATCACCGGAGCCACGTGACCCTCCAGTGTCATCTCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334232.9
ENST00000359362.6
3UTR-3UTR GCA 90 bp CCGGAGATGACACTGGAGGGTCACGTGGCTCCGGTGATTTGGGCCAATTACATGGGCCCCTACAAATGTTaGTCGGGGGTCTTGAGCTGC +
Preference number: 2 (lower is better)
Translates to: PEMTLEGHVAPVIWANYMGPYKC*SGVLSC
Trigger: GCAGCTCAAGACCCCCGAGCAACATTTGTAGGGGCC...CATGTAATTGGCCCAAATCACCGGAGCCACGTGACCCTCCAGTGTCATCTCCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334232.9
ENST00000359362.6
3UTR-3UTR TCA 90 bp CCGGAGATGACACTGGAGGGTCACGTGGCTCCGGTGATTTGGGCCAATTACATGGGGCTCAACAGGCTTTaGGACACCCTTCCCCATATA +
Preference number: 2 (lower is better)
Translates to: PEMTLEGHVAPVIWANYMGLNRL*DTLPHI
Trigger: TATATGGGGAAGGGTGTCTCAAAGCCTGTTGAGCCC...CATGTAATTGGCCCAAATCACCGGAGCCACGTGACCCTCCAGTGTCATCTCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334232.9
ENST00000359362.6
3UTR-3UTR TCA 90 bp CCGGAGATGACACTGGAGGGTCACGTGGCTCCGGTGATTTGGGCCAATTACATGCCGTGGGAATGGCACTaGTCAGGAGAGATGTTACAT +
Preference number: 2 (lower is better)
Translates to: PEMTLEGHVAPVIWANYMPWEWH*SGEMLH
Trigger: ATGTAACATCTCTCCTGATCAGTGCCATTCCCACGG...CATGTAATTGGCCCAAATCACCGGAGCCACGTGACCCTCCAGTGTCATCTCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334232.9
ENST00000359362.6
3UTR-3UTR TCA 90 bp CCGGAGATGACACTGGAGGGTCACGTGGCTCCGGTGATTTGGGCCAATTACATGTGTAGCTGTTTTCTTTaGAACCGTGGGAATGGCACT +
Preference number: 2 (lower is better)
Translates to: PEMTLEGHVAPVIWANYMCSCFL*NRGNGT
Trigger: AGTGCCATTCCCACGGTTTCAAAGAAAACAGCTACA...CATGTAATTGGCCCAAATCACCGGAGCCACGTGACCCTCCAGTGTCATCTCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334232.9
ENST00000359362.6
3UTR-3UTR CCA 90 bp CCGGAGATGACACTGGAGGGTCACGTGGCTCCGGTGATTTGGGCCAATTACATGCCGATTGTAGGACTTTaGCCCTTAGAGGATACTAGA +
Preference number: 2 (lower is better)
Translates to: PEMTLEGHVAPVIWANYMPIVGL*PLEDTR
Trigger: TCTAGTATCCTCTAAGGGCCAAAGTCCTACAATCGG...CATGTAATTGGCCCAAATCACCGGAGCCACGTGACCCTCCAGTGTCATCTCCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334232.9
ENST00000359362.6
3UTR-3UTR TCA 90 bp CCGGAGATGACACTGGAGGGTCACGTGGCTCCGGTGATTTGGGCCAATTACATGATTCACATTCCTTCTTaGCCTGTGGTTGTTTCAACA +
Preference number: 2 (lower is better)
Translates to: PEMTLEGHVAPVIWANYMIHIPS*PVVVST
Trigger: TGTTGAAACAACCACAGGTCAAGAAGGAATGTGAAT...CATGTAATTGGCCCAAATCACCGGAGCCACGTGACCCTCCAGTGTCATCTCCGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334232.9
ENST00000359362.6
3UTR-3UTR CCA 90 bp CCGGAGATGACACTGGAGGGTCACGTGGCTCCGGTGATTTGGGCCAATTACATGTTACATATAATGCTGTaGGTATGTCTGGGGCTATCA +
Preference number: 2 (lower is better)
Translates to: PEMTLEGHVAPVIWANYMLHIML*VCLGLS
Trigger: TGATAGCCCCAGACATACCCACAGCATTATATGTAA...CATGTAATTGGCCCAAATCACCGGAGCCACGTGACCCTCCAGTGTCATCTCCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334232.9
ENST00000359362.6
3UTR-3UTR CCA 90 bp CCGGAGATGACACTGGAGGGTCACGTGGCTCCGGTGATTTGGGCCAATTACATGATTTTATCTTCAACGTaGCATGAATCCATTCCGATT +
Preference number: 2 (lower is better)
Translates to: PEMTLEGHVAPVIWANYMILSST*HESIPI
Trigger: AATCGGAATGGATTCATGCCACGTTGAAGATAAAAT...CATGTAATTGGCCCAAATCACCGGAGCCACGTGACCCTCCAGTGTCATCTCCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334232.9
ENST00000359362.6
3UTR-3UTR CCA 90 bp GCATTCCTTGTAGCTGTTTTCTTTGAAACCGTGGGAATGGCACTGATCAGGAGATGCTGTGGGTATGTCTaGGGCTATCAACAGTCTCAG +
Preference number: 2 (lower is better)
Translates to: AFLVAVFFETVGMALIRRCCGYV*GYQQSQ
Trigger: CTGAGACTGTTGATAGCCCCAGACATACCCACAGCA...TCTCCTGATCAGTGCCATTCCCACGGTTTCAAAGAAAACAGCTACAAGGAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
3UTR-3UTR TCA 90 bp GCATTCCTTGTAGCTGTTTTCTTTGAAACCGTGGGAATGGCACTGATCAGGAGAATCTTCAACGTGGCATaGATCCATTCCGATTGTAGG +
Preference number: 2 (lower is better)
Translates to: AFLVAVFFETVGMALIRRIFNVA*IHSDCR
Trigger: CCTACAATCGGAATGGATTCATGCCACGTTGAAGAT...TCTCCTGATCAGTGCCATTCCCACGGTTTCAAAGAAAACAGCTACAAGGAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
3UTR-3UTR CCA 90 bp GCATTCCTTGTAGCTGTTTTCTTTGAAACCGTGGGAATGGCACTGATCAGGAGATTCCTTCTTGACCTGTaGTTGTTTCAACATCCGGAG +
Preference number: 2 (lower is better)
Translates to: AFLVAVFFETVGMALIRRFLLDL*LFQHPE
Trigger: CTCCGGATGTTGAAACAACCACAGGTCAAGAAGGAA...TCTCCTGATCAGTGCCATTCCCACGGTTTCAAAGAAAACAGCTACAAGGAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
3UTR-3UTR CCA 90 bp GCATTCCTTGTAGCTGTTTTCTTTGAAACCGTGGGAATGGCACTGATCAGGAGACCGATTGTAGGACTTTaGCCCTTAGAGGATACTAGA +
Preference number: 2 (lower is better)
Translates to: AFLVAVFFETVGMALIRRPIVGL*PLEDTR
Trigger: TCTAGTATCCTCTAAGGGCCAAAGTCCTACAATCGG...TCTCCTGATCAGTGCCATTCCCACGGTTTCAAAGAAAACAGCTACAAGGAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
3UTR-3UTR TCA 90 bp GCATTCCTTGTAGCTGTTTTCTTTGAAACCGTGGGAATGGCACTGATCAGGAGAATTCACATTCCTTCTTaGCCTGTGGTTGTTTCAACA +
Preference number: 2 (lower is better)
Translates to: AFLVAVFFETVGMALIRRIHIPS*PVVVST
Trigger: TGTTGAAACAACCACAGGTCAAGAAGGAATGTGAAT...TCTCCTGATCAGTGCCATTCCCACGGTTTCAAAGAAAACAGCTACAAGGAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
3UTR-3UTR CCA 90 bp CAGTGTCCACTGTTCCACGTCCTTGTCCTAAACTCTTATAAAACAACAGATTCATTCCTTCTTGACCTGTaGTTGTTTCAACATCCGGAG +
Preference number: 2 (lower is better)
Translates to: QCPLFHVLVLNSYKTTDSFLLDL*LFQHPE
Trigger: CTCCGGATGTTGAAACAACCACAGGTCAAGAAGGAA...TGAATCTGTTGTTTTATAAGAGTTTAGGACAAGGACGTGGAACAGTGGACACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
3UTR-3UTR CAA 90 bp CCGGAGATGACACTGGAGGGTCACGTGGCTCCGGTGATTTGGGCCAATTACATGCAAGGGGCACCAGTCTaGAGCTGCCCAGGTCACAGC +
Preference number: 3 (lower is better)
Translates to: PEMTLEGHVAPVIWANYMQGAPV*SCPGHS
Trigger: GCTGTGACCTGGGCAGCTCAAGACTGGTGCCCCTTG...CATGTAATTGGCCCAAATCACCGGAGCCACGTGACCCTCCAGTGTCATCTCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334232.9
ENST00000359362.6
3UTR-3UTR CAA 90 bp CCGGAGATGACACTGGAGGGTCACGTGGCTCCGGTGATTTGGGCCAATTACATGCGGCCCCTACAAATGTaGCTCGGGGGTCTTGAGCTG +
Preference number: 3 (lower is better)
Translates to: PEMTLEGHVAPVIWANYMRPLQM*LGGLEL
Trigger: CAGCTCAAGACCCCCGAGCAACATTTGTAGGGGCCG...CATGTAATTGGCCCAAATCACCGGAGCCACGTGACCCTCCAGTGTCATCTCCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334232.9
ENST00000359362.6
3UTR-3UTR CAA 90 bp CCGGAGATGACACTGGAGGGTCACGTGGCTCCGGTGATTTGGGCCAATTACATGTCAACAGCACTAGCTTaGCAGGCAGCGAGGGACACT +
Preference number: 3 (lower is better)
Translates to: PEMTLEGHVAPVIWANYMSTALA*QAARDT
Trigger: AGTGTCCCTCGCTGCCTGCAAAGCTAGTGCTGTTGA...CATGTAATTGGCCCAAATCACCGGAGCCACGTGACCCTCCAGTGTCATCTCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334232.9
ENST00000359362.6
3UTR-3UTR CAA 90 bp CCGGAGATGACACTGGAGGGTCACGTGGCTCCGGTGATTTGGGCCAATTACATGTGGGCTCAACAGGCTTaGAGACACCCTTCCCCATAT +
Preference number: 3 (lower is better)
Translates to: PEMTLEGHVAPVIWANYMWAQQA*RHPSPY
Trigger: ATATGGGGAAGGGTGTCTCAAAGCCTGTTGAGCCCA...CATGTAATTGGCCCAAATCACCGGAGCCACGTGACCCTCCAGTGTCATCTCCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334232.9
ENST00000359362.6
3UTR TCA 72 bp ACTCAGCTCACTTGGTCAGCTGAGGAACATCCTCCATaGAGCTTCGGGGACCTGCCTCAGGGGAAGATTCAG +
Preference number: 3 (lower is better)
Translates to: TQLTWSAEEHPP*SFGDLPQGKIQ
Trigger: CTGAATCTTCCCCTGAGGCAGGTCCCCGAAGCTTCATGGAGGATGTTCCTCAGCTGACCAAGTGAGCTGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642595.1
3UTR-3UTR CAA 90 bp CCGGAGATGACACTGGAGGGTCACGTGGCTCCGGTGATTTGGGCCAATTACATGCTTCTTGACCTGTGGTaGTTTCAACATCCGGAGAGG +
Preference number: 3 (lower is better)
Translates to: PEMTLEGHVAPVIWANYMLLDLW*FQHPER
Trigger: CCTCTCCGGATGTTGAAACAACCACAGGTCAAGAAG...CATGTAATTGGCCCAAATCACCGGAGCCACGTGACCCTCCAGTGTCATCTCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334232.9
ENST00000359362.6
3UTR-3UTR CAA 90 bp CCGGAGATGACACTGGAGGGTCACGTGGCTCCGGTGATTTGGGCCAATTACATGGTGACGTTCAGTTTCTaGCTAACCAGGACAGGTGCA +
Preference number: 3 (lower is better)
Translates to: PEMTLEGHVAPVIWANYMVTFSF*LTRTGA
Trigger: TGCACCTGTCCTGGTTAGCAAGAAACTGAACGTCAC...CATGTAATTGGCCCAAATCACCGGAGCCACGTGACCCTCCAGTGTCATCTCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334232.9
ENST00000359362.6
3UTR-3UTR CAA 90 bp CCGGAGATGACACTGGAGGGTCACGTGGCTCCGGTGATTTGGGCCAATTACATGACTGGCAAGATGACTTaGGAGTTGCCAGACAAGTCG +
Preference number: 3 (lower is better)
Translates to: PEMTLEGHVAPVIWANYMTGKMT*ELPDKS
Trigger: CGACTTGTCTGGCAACTCCAAAGTCATCTTGCCAGT...CATGTAATTGGCCCAAATCACCGGAGCCACGTGACCCTCCAGTGTCATCTCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334232.9
ENST00000359362.6
3UTR-3UTR CAA 90 bp CCGGAGATGACACTGGAGGGTCACGTGGCTCCGGTGATTTGGGCCAATTACATGGATTCACATTCCTTCTaGACCTGTGGTTGTTTCAAC +
Preference number: 3 (lower is better)
Translates to: PEMTLEGHVAPVIWANYMDSHSF*TCGCFN
Trigger: GTTGAAACAACCACAGGTCAAGAAGGAATGTGAATC...CATGTAATTGGCCCAAATCACCGGAGCCACGTGACCCTCCAGTGTCATCTCCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334232.9
ENST00000359362.6
3UTR-3UTR CAA 90 bp GCATTCCTTGTAGCTGTTTTCTTTGAAACCGTGGGAATGGCACTGATCAGGAGACTTCTTGACCTGTGGTaGTTTCAACATCCGGAGAGG +
Preference number: 3 (lower is better)
Translates to: AFLVAVFFETVGMALIRRLLDLW*FQHPER
Trigger: CCTCTCCGGATGTTGAAACAACCACAGGTCAAGAAG...TCTCCTGATCAGTGCCATTCCCACGGTTTCAAAGAAAACAGCTACAAGGAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
3UTR TCA 72 bp GACACTCAGGTAAGCATTCCTTGTAGCTGTTTTCTTTaGAACCGTGGGAATGGCACTGATCAGGAGAGATGT +
Preference number: 3 (lower is better)
Translates to: DTQVSIPCSCFL*NRGNGTDQERC
Trigger: ACATCTCTCCTGATCAGTGCCATTCCCACGGTTTCAAAGAAAACAGCTACAAGGAATGCTTACCTGAGTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
3UTR-3UTR CAA 90 bp CAGTGTCCACTGTTCCACGTCCTTGTCCTAAACTCTTATAAAACAACAGATTCACTTCTTGACCTGTGGTaGTTTCAACATCCGGAGAGG +
Preference number: 3 (lower is better)
Translates to: QCPLFHVLVLNSYKTTDSLLDLW*FQHPER
Trigger: CCTCTCCGGATGTTGAAACAACCACAGGTCAAGAAG...TGAATCTGTTGTTTTATAAGAGTTTAGGACAAGGACGTGGAACAGTGGACACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
3UTR-3UTR CAA 90 bp GCATTCCTTGTAGCTGTTTTCTTTGAAACCGTGGGAATGGCACTGATCAGGAGAGATTCACATTCCTTCTaGACCTGTGGTTGTTTCAAC +
Preference number: 3 (lower is better)
Translates to: AFLVAVFFETVGMALIRRDSHSF*TCGCFN
Trigger: GTTGAAACAACCACAGGTCAAGAAGGAATGTGAATC...TCTCCTGATCAGTGCCATTCCCACGGTTTCAAAGAAAACAGCTACAAGGAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
3UTR CCA 72 bp CCGTATTTCAGAGAGAGGATAATTTTATCTTCAACGTaGCATGAATCCATTCCGATTGTAGGACTTTGGCCC +
Preference number: 3 (lower is better)
Translates to: PYFRERIILSST*HESIPIVGLWP
Trigger: GGGCCAAAGTCCTACAATCGGAATGGATTCATGCCACGTTGAAGATAAAATTATCCTCTCTCTGAAATACGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
3UTR TCA 72 bp TTTCAGAGAGAGGATAATTTTATCTTCAACGTGGCATaGATCCATTCCGATTGTAGGACTTTGGCCCTTAGA +
Preference number: 3 (lower is better)
Translates to: FQREDNFIFNVA*IHSDCRTLALR
Trigger: TCTAAGGGCCAAAGTCCTACAATCGGAATGGATTCATGCCACGTTGAAGATAAAATTATCCTCTCTCTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR GCA 90 bp GGGGTCACTGGGCTTGGTTCTTCTGGTCTAGGTGGTGAGCACCCTGAGGGGCAGGGCTCTGCGCGCCCCTaGCCTCCTCCGCCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: GVTGLGSSGLGGEHPEGQGSARP*PPPPSP
Trigger: AGGGGAAGGCGGAGGAGGGCAGGGGCGCGCAGAGCC...CTGCCCCTCAGGGTGCTCACCACCTAGACCAGAAGAACCAAGCCCAGTGACCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000642595.1
CDS-3UTR GCA 90 bp TCAGGGGTCACTGGGCTTGGTTCTTCTGGTCTAGGTGGTGAGCACCCTGAGGGGCCACCGGCCCAGGGGTaGCAGCAGGCCCAGAGTGTG +
Preference number: 4 (lower is better)
Translates to: SGVTGLGSSGLGGEHPEGPPAQG*QQAQSV
Trigger: CACACTCTGGGCCTGCTGGCACCCCTGGGCCGGTGG...CCCCTCAGGGTGCTCACCACCTAGACCAGAAGAACCAAGCCCAGTGACCCCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000642595.1
CDS-3UTR CCA 90 bp GGGGTCACTGGGCTTGGTTCTTCTGGTCTAGGTGGTGAGCACCCTGAGGGGCAGCGGTTCCGACGCGCCTaGAGCAAACCGTGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: GVTGLGSSGLGGEHPEGQRFRRA*SKPWLC
Trigger: GCAGAGCCACGGTTTGCTCCAGGCGCGTCGGAACCG...CTGCCCCTCAGGGTGCTCACCACCTAGACCAGAAGAACCAAGCCCAGTGACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642595.1
CDS-3UTR CCA 90 bp TCAGGGGTCACTGGGCTTGGTTCTTCTGGTCTAGGTGGTGAGCACCCTGAGGGGGGCGCGGGAGGACCGTaGGACCACGGGGATGAAAAG +
Preference number: 4 (lower is better)
Translates to: SGVTGLGSSGLGGEHPEGGAGGP*DHGDEK
Trigger: CTTTTCATCCCCGTGGTCCCACGGTCCTCCCGCGCC...CCCCTCAGGGTGCTCACCACCTAGACCAGAAGAACCAAGCCCAGTGACCCCTGA
63% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000642595.1
CDS-3UTR CCA 90 bp GAAGATTCAGGGGTCACTGGGCTTGGTTCTTCTGGTCTAGGTGGTGAGCACCCTGCCTGGAGCAAACCGTaGCTCTGCGCGCCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: EDSGVTGLGSSGLGGEHPAWSKP*LCAPLP
Trigger: GGGCAGGGGCGCGCAGAGCCACGGTTTGCTCCAGGC...AGGGTGCTCACCACCTAGACCAGAAGAACCAAGCCCAGTGACCCCTGAATCTTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642595.1
CDS-3UTR TCA 90 bp CCGGAGATGACACTGGAGGGTCACGTGGCTCCGGTGATTTGGGCCAATTACATGTGGCCACCCCGGAGATaGCACTGGAGGGTCACGTGG +
Preference number: 4 (lower is better)
Translates to: PEMTLEGHVAPVIWANYMWPPRR*HWRVTW
Trigger: CCACGTGACCCTCCAGTGTCATCTCCGGGGTGGCCA...CATGTAATTGGCCCAAATCACCGGAGCCACGTGACCCTCCAGTGTCATCTCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334232.9
ENST00000359362.6
CDS-3UTR TCA 90 bp ACCTGCCTCAGGGGAAGATTCAGGGGTCACTGGGCTTGGTTCTTCTGGTCTAGGCAGAGGGTCGTCCGGTaGAGCCATGGCGGCGGGTTA +
Preference number: 4 (lower is better)
Translates to: TCLRGRFRGHWAWFFWSRQRVVR*SHGGGL
Trigger: TAACCCGCCGCCATGGCTTCACCGGACGACCCTCTG...CCTAGACCAGAAGAACCAAGCCCAGTGACCCCTGAATCTTCCCCTGAGGCAGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642595.1
CDS-3UTR CCA 90 bp CCGGAGATGACACTGGAGGGTCACGTGGCTCCGGTGATTTGGGCCAATTACATGGGCGCGGGAGGACCGTaGGACCACGGGGATGAAAAG +
Preference number: 4 (lower is better)
Translates to: PEMTLEGHVAPVIWANYMGAGGP*DHGDEK
Trigger: CTTTTCATCCCCGTGGTCCCACGGTCCTCCCGCGCC...CATGTAATTGGCCCAAATCACCGGAGCCACGTGACCCTCCAGTGTCATCTCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359362.6
CDS-3UTR CCA 90 bp GGTCAGCTGAGGAACATCCTCCATGAAGCTTCGGGGACCTGCCTCAGGGGAAGACGTCCGGTGAAGCCATaGCGGCGGGTTAGGGGCAAA +
Preference number: 4 (lower is better)
Translates to: GQLRNILHEASGTCLRGRRPVKP*RRVRGK
Trigger: TTTGCCCCTAACCCGCCGCCATGGCTTCACCGGACG...TCTTCCCCTGAGGCAGGTCCCCGAAGCTTCATGGAGGATGTTCCTCAGCTGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000642595.1
CDS-3UTR TCA 90 bp GGTCAGCTGAGGAACATCCTCCATGAAGCTTCGGGGACCTGCCTCAGGGGAAGAGTGGGACCACGGGGATaGAAAGTCCTGCGGTTCCGA +
Preference number: 4 (lower is better)
Translates to: GQLRNILHEASGTCLRGRVGPRG*KVLRFR
Trigger: TCGGAACCGCAGGACTTTTCATCCCCGTGGTCCCAC...TCTTCCCCTGAGGCAGGTCCCCGAAGCTTCATGGAGGATGTTCCTCAGCTGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000642595.1
CDS-3UTR GCA 90 bp CCGGAGATGACACTGGAGGGTCACGTGGCTCCGGTGATTTGGGCCAATTACATGGCACCAGTCTTGAGCTaGCCAGGTCACAGCCCCACC +
Preference number: 4 (lower is better)
Translates to: PEMTLEGHVAPVIWANYMAPVLS*PGHSPT
Trigger: GGTGGGGCTGTGACCTGGGCAGCTCAAGACTGGTGC...CATGTAATTGGCCCAAATCACCGGAGCCACGTGACCCTCCAGTGTCATCTCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334232.9
ENST00000359362.6
CDS-3UTR GCA 90 bp CTTGGTCAGCTGAGGAACATCCTCCATGAAGCTTCGGGGACCTGCCTCAGGGGAGGGGATGAAAAGTCCTaGGGTTCCGACGCGCCTGGA +
Preference number: 4 (lower is better)
Translates to: LGQLRNILHEASGTCLRGGDEKS*GSDAPG
Trigger: TCCAGGCGCGTCGGAACCGCAGGACTTTTCATCCCC...TCCCCTGAGGCAGGTCCCCGAAGCTTCATGGAGGATGTTCCTCAGCTGACCAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000642595.1
CDS-3UTR CCA 90 bp AGCTCACTTGGTCAGCTGAGGAACATCCTCCATGAAGCTTCGGGGACCTGCCTCAGCAGGCCCAGAGTGTaGCCCAGCATCTCAGCCACG +
Preference number: 4 (lower is better)
Translates to: SSLGQLRNILHEASGTCLSRPRV*PSISAT
Trigger: CGTGGCTGAGATGCTGGGCCACACTCTGGGCCTGCT...GAGGCAGGTCCCCGAAGCTTCATGGAGGATGTTCCTCAGCTGACCAAGTGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642595.1
CDS-3UTR TCA 90 bp CCGGAGATGACACTGGAGGGTCACGTGGCTCCGGTGATTTGGGCCAATTACATGTGGCCCACCGTCCTCTaGCTGTTCCGGAGCAAGAAC +
Preference number: 4 (lower is better)
Translates to: PEMTLEGHVAPVIWANYMWPTVL*LFRSKN
Trigger: GTTCTTGCTCCGGAACAGTCAGAGGACGGTGGGCCA...CATGTAATTGGCCCAAATCACCGGAGCCACGTGACCCTCCAGTGTCATCTCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334232.9
ENST00000359362.6
CDS-3UTR TCA 90 bp CCGGAGATGACACTGGAGGGTCACGTGGCTCCGGTGATTTGGGCCAATTACATGGCCAGCTTGCACGCCTaGAGGGACTCAGTCACAGAG +
Preference number: 4 (lower is better)
Translates to: PEMTLEGHVAPVIWANYMASLHA*RDSVTE
Trigger: CTCTGTGACTGAGTCCCTTCAGGCGTGCAAGCTGGC...CATGTAATTGGCCCAAATCACCGGAGCCACGTGACCCTCCAGTGTCATCTCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334232.9
ENST00000359362.6
CDS-3UTR TCA 90 bp CCGGAGATGACACTGGAGGGTCACGTGGCTCCGGTGATTTGGGCCAATTACATGGTTGCTCGGGGGTCTTaGGCTGCCGGAGTTGACACA +
Preference number: 4 (lower is better)
Translates to: PEMTLEGHVAPVIWANYMVARGS*AAGVDT
Trigger: TGTGTCAACTCCGGCAGCTCAAGACCCCCGAGCAAC...CATGTAATTGGCCCAAATCACCGGAGCCACGTGACCCTCCAGTGTCATCTCCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334232.9
ENST00000359362.6
CDS-3UTR TCA 90 bp GGGACCTGCCTCAGGGGAAGATTCAGGGGTCACTGGGCTTGGTTCTTCTGGTCTGAGGAACATCCTCCATaGAGCTTCGGGGACCTGCCT +
Preference number: 4 (lower is better)
Translates to: GTCLRGRFRGHWAWFFWSEEHPP*SFGDLP
Trigger: AGGCAGGTCCCCGAAGCTTCATGGAGGATGTTCCTC...AGACCAGAAGAACCAAGCCCAGTGACCCCTGAATCTTCCCCTGAGGCAGGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000642595.1
CDS-3UTR GCA 90 bp GGGACCTGCCTCAGGGGAAGATTCAGGGGTCACTGGGCTTGGTTCTTCTGGTCTGAAGCTTCGGGGACCTaGCTCAGGGGAAGATTCAGG +
Preference number: 4 (lower is better)
Translates to: GTCLRGRFRGHWAWFFWSEASGT*LRGRFR
Trigger: CCTGAATCTTCCCCTGAGGCAGGTCCCCGAAGCTTC...AGACCAGAAGAACCAAGCCCAGTGACCCCTGAATCTTCCCCTGAGGCAGGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000642595.1
CDS-3UTR CCA 90 bp CCGGAGATGACACTGGAGGGTCACGTGGCTCCGGTGATTTGGGCCAATTACATGGACAAGTCGGCGATGTaGTGGTACAGGGGAACCCCC +
Preference number: 4 (lower is better)
Translates to: PEMTLEGHVAPVIWANYMDKSAM*WYRGTP
Trigger: GGGGGTTCCCCTGTACCACCACATCGCCGACTTGTC...CATGTAATTGGCCCAAATCACCGGAGCCACGTGACCCTCCAGTGTCATCTCCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334232.9
ENST00000359362.6
CDS-3UTR CCA 90 bp GGGGTCACTGGGCTTGGTTCTTCTGGTCTAGGTGGTGAGCACCCTGAGGGGCAGTCAGCCACGATCCTCTaGAAGAGGATCTCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: GVTGLGSSGLGGEHPEGQSATIL*KRISSA
Trigger: AGCACTGGAGATCCTCTTCCAGAGGATCGTGGCTGA...CTGCCCCTCAGGGTGCTCACCACCTAGACCAGAAGAACCAAGCCCAGTGACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642595.1
CDS-3UTR CCA 90 bp CCGGAGATGACACTGGAGGGTCACGTGGCTCCGGTGATTTGGGCCAATTACATGGCAAGAACTCCAAGGTaGGGCTCTGTGGCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: PEMTLEGHVAPVIWANYMARTPR*GSVASA
Trigger: AGCAGAGGCCACAGAGCCCCACCTTGGAGTTCTTGC...CATGTAATTGGCCCAAATCACCGGAGCCACGTGACCCTCCAGTGTCATCTCCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334232.9
ENST00000359362.6
CDS-3UTR CCA 90 bp CCGGAGATGACACTGGAGGGTCACGTGGCTCCGGTGATTTGGGCCAATTACATGAAGTCGGCGATGTGGTaGTACAGGGGAACCCCCTTC +
Preference number: 4 (lower is better)
Translates to: PEMTLEGHVAPVIWANYMKSAMW*YRGTPF
Trigger: GAAGGGGGTTCCCCTGTACCACCACATCGCCGACTT...CATGTAATTGGCCCAAATCACCGGAGCCACGTGACCCTCCAGTGTCATCTCCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334232.9
ENST00000359362.6
CDS-3UTR CCA 90 bp GCATTCCTTGTAGCTGTTTTCTTTGAAACCGTGGGAATGGCACTGATCAGGAGAGCCTGGAGCAAACCGTaGCTCTGCGCGCCCCTGCCC +
Preference number: 4 (lower is better)
Translates to: AFLVAVFFETVGMALIRRAWSKP*LCAPLP
Trigger: GGGCAGGGGCGCGCAGAGCCACGGTTTGCTCCAGGC...TCTCCTGATCAGTGCCATTCCCACGGTTTCAAAGAAAACAGCTACAAGGAATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359362.6
CDS-3UTR CCA 90 bp ACCTGCCTCAGGGGAAGATTCAGGGGTCACTGGGCTTGGTTCTTCTGGTCTAGGAGGGGTCACTGGGCTTaGTTCTTCTGGTCTAGGTGG +
Preference number: 4 (lower is better)
Translates to: TCLRGRFRGHWAWFFWSRRGHWA*FFWSRW
Trigger: CCACCTAGACCAGAAGAACCAAGCCCAGTGACCCCT...CCTAGACCAGAAGAACCAAGCCCAGTGACCCCTGAATCTTCCCCTGAGGCAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000642595.1
CDS-3UTR TCA 90 bp AGCTCACTTGGTCAGCTGAGGAACATCCTCCATGAAGCTTCGGGGACCTGCCTCGCTCACTTGGTCAGCTaGGGAACATCCTCCATGAAG +
Preference number: 4 (lower is better)
Translates to: SSLGQLRNILHEASGTCLAHLVS*GTSSMK
Trigger: CTTCATGGAGGATGTTCCTCAGCTGACCAAGTGAGC...GAGGCAGGTCCCCGAAGCTTCATGGAGGATGTTCCTCAGCTGACCAAGTGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642595.1
CDS-3UTR CCA 90 bp GCATTCCTTGTAGCTGTTTTCTTTGAAACCGTGGGAATGGCACTGATCAGGAGACTCCACGCTCCCGCTTaGGCCACTCCTCGTCCACCC +
Preference number: 4 (lower is better)
Translates to: AFLVAVFFETVGMALIRRLHAPA*ATPRPP
Trigger: GGGTGGACGAGGAGTGGCCCAAGCGGGAGCGTGGAG...TCTCCTGATCAGTGCCATTCCCACGGTTTCAAAGAAAACAGCTACAAGGAATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR TCA 90 bp CCGGAGATGACACTGGAGGGTCACGTGGCTCCGGTGATTTGGGCCAATTACATGATCCGGAGAGGCCAATaGAGGAAGAAGAAGAGCTCT +
Preference number: 4 (lower is better)
Translates to: PEMTLEGHVAPVIWANYMIRRGQ*RKKKSS
Trigger: AGAGCTCTTCTTCTTCCTTCATTGGCCTCTCCGGAT...CATGTAATTGGCCCAAATCACCGGAGCCACGTGACCCTCCAGTGTCATCTCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334232.9
ENST00000359362.6
CDS-3UTR TCA 90 bp CCGGAGATGACACTGGAGGGTCACGTGGCTCCGGTGATTTGGGCCAATTACATGGCTCCTCTTCAATTCTaGGGAGCTGGTTGTACTTGG +
Preference number: 4 (lower is better)
Translates to: PEMTLEGHVAPVIWANYMAPLQF*GAGCTW
Trigger: CCAAGTACAACCAGCTCCTCAGAATTGAAGAGGAGC...CATGTAATTGGCCCAAATCACCGGAGCCACGTGACCCTCCAGTGTCATCTCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334232.9
ENST00000359362.6
CDS-3UTR TCA 90 bp GCATTCCTTGTAGCTGTTTTCTTTGAAACCGTGGGAATGGCACTGATCAGGAGATGGCCACCCCGGAGATaGCACTGGAGGGTCACGTGG +
Preference number: 4 (lower is better)
Translates to: AFLVAVFFETVGMALIRRWPPRR*HWRVTW
Trigger: CCACGTGACCCTCCAGTGTCATCTCCGGGGTGGCCA...TCTCCTGATCAGTGCCATTCCCACGGTTTCAAAGAAAACAGCTACAAGGAATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334232.9
ENST00000359362.6
CDS-3UTR TCA 90 bp GCATTCCTTGTAGCTGTTTTCTTTGAAACCGTGGGAATGGCACTGATCAGGAGACAGAGGGTCGTCCGGTaGAGCCATGGCGGCGGGTTA +
Preference number: 4 (lower is better)
Translates to: AFLVAVFFETVGMALIRRQRVVR*SHGGGL
Trigger: TAACCCGCCGCCATGGCTTCACCGGACGACCCTCTG...TCTCCTGATCAGTGCCATTCCCACGGTTTCAAAGAAAACAGCTACAAGGAATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359362.6
CDS-3UTR GCA 90 bp CAGTGTCCACTGTTCCACGTCCTTGTCCTAAACTCTTATAAAACAACAGATTCAGGCTCTGCGCGCCCCTaGCCTCCTCCGCCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: QCPLFHVLVLNSYKTTDSGSARP*PPPPSP
Trigger: AGGGGAAGGCGGAGGAGGGCAGGGGCGCGCAGAGCC...TGAATCTGTTGTTTTATAAGAGTTTAGGACAAGGACGTGGAACAGTGGACACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359362.6
CDS-3UTR CCA 90 bp CCGGAGATGACACTGGAGGGTCACGTGGCTCCGGTGATTTGGGCCAATTACATGTGCTCGCTGGTTGTCTaGCCAGAGTCAAACCTTCTA +
Preference number: 4 (lower is better)
Translates to: PEMTLEGHVAPVIWANYMCSLVV*PESNLL
Trigger: TAGAAGGTTTGACTCTGGCCAGACAACCAGCGAGCA...CATGTAATTGGCCCAAATCACCGGAGCCACGTGACCCTCCAGTGTCATCTCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334232.9
CDS-3UTR CCA 90 bp CCGGAGATGACACTGGAGGGTCACGTGGCTCCGGTGATTTGGGCCAATTACATGGTCCTTGCTGATCTCTaGAAGAGGATCTCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: PEMTLEGHVAPVIWANYMVLADL*KRISSA
Trigger: AGCACTGGAGATCCTCTTCCAGAGATCAGCAAGGAC...CATGTAATTGGCCCAAATCACCGGAGCCACGTGACCCTCCAGTGTCATCTCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334232.9
ENST00000359362.6
CDS-3UTR CCA 90 bp CCGGAGATGACACTGGAGGGTCACGTGGCTCCGGTGATTTGGGCCAATTACATGTGCTGTGGGTATGTCTaGGGCTATCAACAGTCTCAG +
Preference number: 4 (lower is better)
Translates to: PEMTLEGHVAPVIWANYMCCGYV*GYQQSQ
Trigger: CTGAGACTGTTGATAGCCCCAGACATACCCACAGCA...CATGTAATTGGCCCAAATCACCGGAGCCACGTGACCCTCCAGTGTCATCTCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334232.9
ENST00000359362.6
CDS-3UTR CCA 90 bp CCGGAGATGACACTGGAGGGTCACGTGGCTCCGGTGATTTGGGCCAATTACATGGTGGCTCCGGTGATTTaGGCCAATTACATGACTGCA +
Preference number: 4 (lower is better)
Translates to: PEMTLEGHVAPVIWANYMVAPVI*ANYMTA
Trigger: TGCAGTCATGTAATTGGCCCAAATCACCGGAGCCAC...CATGTAATTGGCCCAAATCACCGGAGCCACGTGACCCTCCAGTGTCATCTCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334232.9
ENST00000359362.6
CDS-3UTR CCA 90 bp GCATTCCTTGTAGCTGTTTTCTTTGAAACCGTGGGAATGGCACTGATCAGGAGACGGTTCCGACGCGCCTaGAGCAAACCGTGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: AFLVAVFFETVGMALIRRRFRRA*SKPWLC
Trigger: GCAGAGCCACGGTTTGCTCCAGGCGCGTCGGAACCG...TCTCCTGATCAGTGCCATTCCCACGGTTTCAAAGAAAACAGCTACAAGGAATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000359362.6
CDS-3UTR CCA 90 bp CTTGGTCAGCTGAGGAACATCCTCCATGAAGCTTCGGGGACCTGCCTCAGGGGATTCACTCAGCTCACTTaGTCAGCTGAGGAACATCCT +
Preference number: 4 (lower is better)
Translates to: LGQLRNILHEASGTCLRGFTQLT*SAEEHP
Trigger: AGGATGTTCCTCAGCTGACCAAGTGAGCTGAGTGAA...TCCCCTGAGGCAGGTCCCCGAAGCTTCATGGAGGATGTTCCTCAGCTGACCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642595.1
CDS-3UTR TCA 90 bp CCGGAGATGACACTGGAGGGTCACGTGGCTCCGGTGATTTGGGCCAATTACATGGGCCCATGGCGATGTTaGGTTTGGCTTCTTAATTCT +
Preference number: 4 (lower is better)
Translates to: PEMTLEGHVAPVIWANYMGPWRC*VWLLNS
Trigger: AGAATTAAGAAGCCAAACTCAACATCGCCATGGGCC...CATGTAATTGGCCCAAATCACCGGAGCCACGTGACCCTCCAGTGTCATCTCCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334232.9
CDS-3UTR TCA 90 bp GGGACCTGCCTCAGGGGAAGATTCAGGGGTCACTGGGCTTGGTTCTTCTGGTCTGGGAGTTCCGTATCTTaGATGGGATATTTGTCTGAC +
Preference number: 4 (lower is better)
Translates to: GTCLRGRFRGHWAWFFWSGSSVS*MGYLSD
Trigger: GTCAGACAAATATCCCATTCAAGATACGGAACTCCC...AGACCAGAAGAACCAAGCCCAGTGACCCCTGAATCTTCCCCTGAGGCAGGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642595.1
CDS-3UTR TCA 90 bp GCATTCCTTGTAGCTGTTTTCTTTGAAACCGTGGGAATGGCACTGATCAGGAGAAAGGGGCACCAGTCTTaGGCTGCCCAGGTCACAGCC +
Preference number: 4 (lower is better)
Translates to: AFLVAVFFETVGMALIRRKGHQS*AAQVTA
Trigger: GGCTGTGACCTGGGCAGCTCAAGACTGGTGCCCCTT...TCTCCTGATCAGTGCCATTCCCACGGTTTCAAAGAAAACAGCTACAAGGAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR GCA 90 bp TCAGGGGTCACTGGGCTTGGTTCTTCTGGTCTAGGTGGTGAGCACCCTGAGGGGGAAGAGGATCTCCAGTaGTATCTGGAAAGCCATTTT +
Preference number: 4 (lower is better)
Translates to: SGVTGLGSSGLGGEHPEGEEDLQ*YLESHF
Trigger: AAAATGGCTTTCCAGATAGCACTGGAGATCCTCTTC...CCCCTCAGGGTGCTCACCACCTAGACCAGAAGAACCAAGCCCAGTGACCCCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642595.1
CDS-3UTR GCA 90 bp GCATTCCTTGTAGCTGTTTTCTTTGAAACCGTGGGAATGGCACTGATCAGGAGAGCACCAGTCTTGAGCTaGCCAGGTCACAGCCCCACC +
Preference number: 4 (lower is better)
Translates to: AFLVAVFFETVGMALIRRAPVLS*PGHSPT
Trigger: GGTGGGGCTGTGACCTGGGCAGCTCAAGACTGGTGC...TCTCCTGATCAGTGCCATTCCCACGGTTTCAAAGAAAACAGCTACAAGGAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR CCA 90 bp CCGGAGATGACACTGGAGGGTCACGTGGCTCCGGTGATTTGGGCCAATTACATGCTCTGGAGTTTGCCATaGAAGAAGCAACAGATTGCG +
Preference number: 4 (lower is better)
Translates to: PEMTLEGHVAPVIWANYMLWSLP*KKQQIA
Trigger: CGCAATCTGTTGCTTCTTCCATGGCAAACTCCAGAG...CATGTAATTGGCCCAAATCACCGGAGCCACGTGACCCTCCAGTGTCATCTCCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334232.9
CDS-3UTR CCA 90 bp TCAGGGGTCACTGGGCTTGGTTCTTCTGGTCTAGGTGGTGAGCACCCTGAGGGGGTCTGTGTCTTCCACTaGTTCCTTTACCATATGATC +
Preference number: 4 (lower is better)
Translates to: SGVTGLGSSGLGGEHPEGVCVFH*FLYHMI
Trigger: GATCATATGGTAAAGGAACCAGTGGAAGACACAGAC...CCCCTCAGGGTGCTCACCACCTAGACCAGAAGAACCAAGCCCAGTGACCCCTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000642595.1
CDS-3UTR CCA 90 bp CCGGAGATGACACTGGAGGGTCACGTGGCTCCGGTGATTTGGGCCAATTACATGCAAAACTGCCAGCTTTaGGGAAAACCAGTGTCCACT +
Preference number: 4 (lower is better)
Translates to: PEMTLEGHVAPVIWANYMQNCQL*GKPVST
Trigger: AGTGGACACTGGTTTTCCCCAAAGCTGGCAGTTTTG...CATGTAATTGGCCCAAATCACCGGAGCCACGTGACCCTCCAGTGTCATCTCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000334232.9
ENST00000359362.6
CDS-3UTR TCA 90 bp CCGGAGATGACACTGGAGGGTCACGTGGCTCCGGTGATTTGGGCCAATTACATGGGGAGTTCCGTATCTTaGATGGGATATTTGTCTGAC +
Preference number: 4 (lower is better)
Translates to: PEMTLEGHVAPVIWANYMGSSVS*MGYLSD
Trigger: GTCAGACAAATATCCCATTCAAGATACGGAACTCCC...CATGTAATTGGCCCAAATCACCGGAGCCACGTGACCCTCCAGTGTCATCTCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334232.9
ENST00000359362.6
CDS-3UTR TCA 90 bp GCATTCCTTGTAGCTGTTTTCTTTGAAACCGTGGGAATGGCACTGATCAGGAGATGGCCCACCGTCCTCTaGCTGTTCCGGAGCAAGAAC +
Preference number: 4 (lower is better)
Translates to: AFLVAVFFETVGMALIRRWPTVL*LFRSKN
Trigger: GTTCTTGCTCCGGAACAGTCAGAGGACGGTGGGCCA...TCTCCTGATCAGTGCCATTCCCACGGTTTCAAAGAAAACAGCTACAAGGAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR TCA 90 bp GCATTCCTTGTAGCTGTTTTCTTTGAAACCGTGGGAATGGCACTGATCAGGAGAGTGGGACCACGGGGATaGAAAGTCCTGCGGTTCCGA +
Preference number: 4 (lower is better)
Translates to: AFLVAVFFETVGMALIRRVGPRG*KVLRFR
Trigger: TCGGAACCGCAGGACTTTTCATCCCCGTGGTCCCAC...TCTCCTGATCAGTGCCATTCCCACGGTTTCAAAGAAAACAGCTACAAGGAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359362.6
CDS-3UTR GCA 90 bp GCATTCCTTGTAGCTGTTTTCTTTGAAACCGTGGGAATGGCACTGATCAGGAGACCCTGTGGTAGAGCCTaGAGAGCTCCATCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: AFLVAVFFETVGMALIRRPCGRA*RAPSAG
Trigger: GCCAGCTGATGGAGCTCTGCAGGCTCTACCACAGGG...TCTCCTGATCAGTGCCATTCCCACGGTTTCAAAGAAAACAGCTACAAGGAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR GCA 90 bp GCATTCCTTGTAGCTGTTTTCTTTGAAACCGTGGGAATGGCACTGATCAGGAGACCTCGTCCACCCACCTaGGCAGAACCTTCTCCACGT +
Preference number: 4 (lower is better)
Translates to: AFLVAVFFETVGMALIRRPRPPT*AEPSPR
Trigger: ACGTGGAGAAGGTTCTGCGCAGGTGGGTGGACGAGG...TCTCCTGATCAGTGCCATTCCCACGGTTTCAAAGAAAACAGCTACAAGGAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR GCA 90 bp GCATTCCTTGTAGCTGTTTTCTTTGAAACCGTGGGAATGGCACTGATCAGGAGAGGGGATGAAAAGTCCTaGGGTTCCGACGCGCCTGGA +
Preference number: 4 (lower is better)
Translates to: AFLVAVFFETVGMALIRRGDEKS*GSDAPG
Trigger: TCCAGGCGCGTCGGAACCGCAGGACTTTTCATCCCC...TCTCCTGATCAGTGCCATTCCCACGGTTTCAAAGAAAACAGCTACAAGGAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359362.6
CDS-3UTR CCA 90 bp GCATTCCTTGTAGCTGTTTTCTTTGAAACCGTGGGAATGGCACTGATCAGGAGAGCAAGTCACTTATGGTaGGGGCCCGGAGCAAGCAGG +
Preference number: 4 (lower is better)
Translates to: AFLVAVFFETVGMALIRRASHLW*GPGASR
Trigger: CCTGCTTGCTCCGGGCCCCCACCATAAGTGACTTGC...TCTCCTGATCAGTGCCATTCCCACGGTTTCAAAGAAAACAGCTACAAGGAATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR CCA 90 bp CCGGAGATGACACTGGAGGGTCACGTGGCTCCGGTGATTTGGGCCAATTACATGTTCCTTCTTGACCTGTaGTTGTTTCAACATCCGGAG +
Preference number: 4 (lower is better)
Translates to: PEMTLEGHVAPVIWANYMFLLDL*LFQHPE
Trigger: CTCCGGATGTTGAAACAACCACAGGTCAAGAAGGAA...CATGTAATTGGCCCAAATCACCGGAGCCACGTGACCCTCCAGTGTCATCTCCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334232.9
ENST00000359362.6
CDS-3UTR CCA 90 bp GCATTCCTTGTAGCTGTTTTCTTTGAAACCGTGGGAATGGCACTGATCAGGAGAGACAAGTCGGCGATGTaGTGGTACAGGGGAACCCCC +
Preference number: 4 (lower is better)
Translates to: AFLVAVFFETVGMALIRRDKSAM*WYRGTP
Trigger: GGGGGTTCCCCTGTACCACCACATCGCCGACTTGTC...TCTCCTGATCAGTGCCATTCCCACGGTTTCAAAGAAAACAGCTACAAGGAATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR TCA 90 bp CCGGAGATGACACTGGAGGGTCACGTGGCTCCGGTGATTTGGGCCAATTACATGACGTCTAGTAAGTCCTaGTCATTGAGCAAGTCACTT +
Preference number: 4 (lower is better)
Translates to: PEMTLEGHVAPVIWANYMTSSKS*SLSKSL
Trigger: AAGTGACTTGCTCAATGATCAGGACTTACTAGACGT...CATGTAATTGGCCCAAATCACCGGAGCCACGTGACCCTCCAGTGTCATCTCCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334232.9
ENST00000359362.6
CDS-3UTR TCA 90 bp GCATTCCTTGTAGCTGTTTTCTTTGAAACCGTGGGAATGGCACTGATCAGGAGAAGCCAGACAGTCAGGTaGGATGTACCTGGTGGGGTC +
Preference number: 4 (lower is better)
Translates to: AFLVAVFFETVGMALIRRSQTVR*DVPGGV
Trigger: GACCCCACCAGGTACATCTCACCTGACTGTCTGGCT...TCTCCTGATCAGTGCCATTCCCACGGTTTCAAAGAAAACAGCTACAAGGAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR GCA 90 bp GCATTCCTTGTAGCTGTTTTCTTTGAAACCGTGGGAATGGCACTGATCAGGAGAGGGCTCTGTGGCCTCTaGTCCAGGAAGCACAATTCG +
Preference number: 4 (lower is better)
Translates to: AFLVAVFFETVGMALIRRGLCGL*SRKHNS
Trigger: CGAATTGTGCTTCCTGGAGCAGAGGCCACAGAGCCC...TCTCCTGATCAGTGCCATTCCCACGGTTTCAAAGAAAACAGCTACAAGGAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR GCA 90 bp GCATTCCTTGTAGCTGTTTTCTTTGAAACCGTGGGAATGGCACTGATCAGGAGAGGCCCCTACAAATGTTaGTCGGGGGTCTTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: AFLVAVFFETVGMALIRRGPYKC*SGVLSC
Trigger: GCAGCTCAAGACCCCCGAGCAACATTTGTAGGGGCC...TCTCCTGATCAGTGCCATTCCCACGGTTTCAAAGAAAACAGCTACAAGGAATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR GCA 90 bp GCATTCCTTGTAGCTGTTTTCTTTGAAACCGTGGGAATGGCACTGATCAGGAGAGTCTCCAGACTGGTGTaGAGTGGCGCAATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: AFLVAVFFETVGMALIRRVSRLV*SGAISA
Trigger: AGCCGAGATTGCGCCACTGCACACCAGTCTGGAGAC...TCTCCTGATCAGTGCCATTCCCACGGTTTCAAAGAAAACAGCTACAAGGAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR CCA 90 bp CCGGAGATGACACTGGAGGGTCACGTGGCTCCGGTGATTTGGGCCAATTACATGTGGGGAATTTGTAGGTaGGAGGATAAACTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: PEMTLEGHVAPVIWANYMWGICR*EDKLPL
Trigger: AAGAGGAAGTTTATCCTCCCACCTACAAATTCCCCA...CATGTAATTGGCCCAAATCACCGGAGCCACGTGACCCTCCAGTGTCATCTCCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334232.9
CDS-3UTR CCA 90 bp CCGGAGATGACACTGGAGGGTCACGTGGCTCCGGTGATTTGGGCCAATTACATGGTCTGTGTCTTCCACTaGTTCCTTTACCATATGATC +
Preference number: 4 (lower is better)
Translates to: PEMTLEGHVAPVIWANYMVCVFH*FLYHMI
Trigger: GATCATATGGTAAAGGAACCAGTGGAAGACACAGAC...CATGTAATTGGCCCAAATCACCGGAGCCACGTGACCCTCCAGTGTCATCTCCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334232.9
ENST00000359362.6
CDS-3UTR CCA 90 bp GCATTCCTTGTAGCTGTTTTCTTTGAAACCGTGGGAATGGCACTGATCAGGAGAGCAAGAACTCCAAGGTaGGGCTCTGTGGCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: AFLVAVFFETVGMALIRRARTPR*GSVASA
Trigger: AGCAGAGGCCACAGAGCCCCACCTTGGAGTTCTTGC...TCTCCTGATCAGTGCCATTCCCACGGTTTCAAAGAAAACAGCTACAAGGAATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR TCA 90 bp CTTGGTCAGCTGAGGAACATCCTCCATGAAGCTTCGGGGACCTGCCTCAGGGGACTGATTTTTCATATCTaGATTTCGTGGGCAGTTCAA +
Preference number: 4 (lower is better)
Translates to: LGQLRNILHEASGTCLRGLIFHI*ISWAVQ
Trigger: TTGAACTGCCCACGAAATTCAGATATGAAAAATCAG...TCCCCTGAGGCAGGTCCCCGAAGCTTCATGGAGGATGTTCCTCAGCTGACCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000642595.1
CDS-3UTR TCA 90 bp CAGTGTCCACTGTTCCACGTCCTTGTCCTAAACTCTTATAAAACAACAGATTCAAAGGGGCACCAGTCTTaGGCTGCCCAGGTCACAGCC +
Preference number: 4 (lower is better)
Translates to: QCPLFHVLVLNSYKTTDSKGHQS*AAQVTA
Trigger: GGCTGTGACCTGGGCAGCTCAAGACTGGTGCCCCTT...TGAATCTGTTGTTTTATAAGAGTTTAGGACAAGGACGTGGAACAGTGGACACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR GCA 90 bp CAGTGTCCACTGTTCCACGTCCTTGTCCTAAACTCTTATAAAACAACAGATTCATGGCCTGGGCCAGCTTaGACGCCTGAAGGGACTCAG +
Preference number: 4 (lower is better)
Translates to: QCPLFHVLVLNSYKTTDSWPGPA*TPEGTQ
Trigger: CTGAGTCCCTTCAGGCGTGCAAGCTGGCCCAGGCCA...TGAATCTGTTGTTTTATAAGAGTTTAGGACAAGGACGTGGAACAGTGGACACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR GCA 90 bp CAGTGTCCACTGTTCCACGTCCTTGTCCTAAACTCTTATAAAACAACAGATTCAGCACCAGTCTTGAGCTaGCCAGGTCACAGCCCCACC +
Preference number: 4 (lower is better)
Translates to: QCPLFHVLVLNSYKTTDSAPVLS*PGHSPT
Trigger: GGTGGGGCTGTGACCTGGGCAGCTCAAGACTGGTGC...TGAATCTGTTGTTTTATAAGAGTTTAGGACAAGGACGTGGAACAGTGGACACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR CCA 90 bp CAGTGTCCACTGTTCCACGTCCTTGTCCTAAACTCTTATAAAACAACAGATTCACGTCCGGTGAAGCCATaGCGGCGGGTTAGGGGCAAA +
Preference number: 4 (lower is better)
Translates to: QCPLFHVLVLNSYKTTDSRPVKP*RRVRGK
Trigger: TTTGCCCCTAACCCGCCGCCATGGCTTCACCGGACG...TGAATCTGTTGTTTTATAAGAGTTTAGGACAAGGACGTGGAACAGTGGACACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000359362.6
CDS-3UTR TCA 90 bp CCGGAGATGACACTGGAGGGTCACGTGGCTCCGGTGATTTGGGCCAATTACATGCTGATTTTTCATATCTaGATTTCGTGGGCAGTTCAA +
Preference number: 4 (lower is better)
Translates to: PEMTLEGHVAPVIWANYMLIFHI*ISWAVQ
Trigger: TTGAACTGCCCACGAAATTCAGATATGAAAAATCAG...CATGTAATTGGCCCAAATCACCGGAGCCACGTGACCCTCCAGTGTCATCTCCGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000334232.9
ENST00000359362.6
CDS-3UTR TCA 90 bp CAGTGTCCACTGTTCCACGTCCTTGTCCTAAACTCTTATAAAACAACAGATTCATGGCCCACCGTCCTCTaGCTGTTCCGGAGCAAGAAC +
Preference number: 4 (lower is better)
Translates to: QCPLFHVLVLNSYKTTDSWPTVL*LFRSKN
Trigger: GTTCTTGCTCCGGAACAGTCAGAGGACGGTGGGCCA...TGAATCTGTTGTTTTATAAGAGTTTAGGACAAGGACGTGGAACAGTGGACACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR TCA 90 bp CAGTGTCCACTGTTCCACGTCCTTGTCCTAAACTCTTATAAAACAACAGATTCAGCCAGCTTGCACGCCTaGAGGGACTCAGTCACAGAG +
Preference number: 4 (lower is better)
Translates to: QCPLFHVLVLNSYKTTDSASLHA*RDSVTE
Trigger: CTCTGTGACTGAGTCCCTTCAGGCGTGCAAGCTGGC...TGAATCTGTTGTTTTATAAGAGTTTAGGACAAGGACGTGGAACAGTGGACACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR TCA 90 bp CAGTGTCCACTGTTCCACGTCCTTGTCCTAAACTCTTATAAAACAACAGATTCAGTTGCTCGGGGGTCTTaGGCTGCCGGAGTTGACACA +
Preference number: 4 (lower is better)
Translates to: QCPLFHVLVLNSYKTTDSVARGS*AAGVDT
Trigger: TGTGTCAACTCCGGCAGCTCAAGACCCCCGAGCAAC...TGAATCTGTTGTTTTATAAGAGTTTAGGACAAGGACGTGGAACAGTGGACACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR GCA 90 bp GCATTCCTTGTAGCTGTTTTCTTTGAAACCGTGGGAATGGCACTGATCAGGAGACAGATTGCGAGAAGATaGTCGCTGGTTGTCTGGCCA +
Preference number: 4 (lower is better)
Translates to: AFLVAVFFETVGMALIRRQIARR*SLVVWP
Trigger: TGGCCAGACAACCAGCGAGCATCTTCTCGCAATCTG...TCTCCTGATCAGTGCCATTCCCACGGTTTCAAAGAAAACAGCTACAAGGAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334232.9
CDS-3UTR GCA 90 bp CAGTGTCCACTGTTCCACGTCCTTGTCCTAAACTCTTATAAAACAACAGATTCACCTCGTCCACCCACCTaGGCAGAACCTTCTCCACGT +
Preference number: 4 (lower is better)
Translates to: QCPLFHVLVLNSYKTTDSPRPPT*AEPSPR
Trigger: ACGTGGAGAAGGTTCTGCGCAGGTGGGTGGACGAGG...TGAATCTGTTGTTTTATAAGAGTTTAGGACAAGGACGTGGAACAGTGGACACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR CCA 90 bp GCATTCCTTGTAGCTGTTTTCTTTGAAACCGTGGGAATGGCACTGATCAGGAGACGAGAAGATGCTCGCTaGTTGTCTGGCCAGAGTCAA +
Preference number: 4 (lower is better)
Translates to: AFLVAVFFETVGMALIRRREDAR*LSGQSQ
Trigger: TTGACTCTGGCCAGACAACCAGCGAGCATCTTCTCG...TCTCCTGATCAGTGCCATTCCCACGGTTTCAAAGAAAACAGCTACAAGGAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334232.9
CDS-3UTR CCA 90 bp GGGACCTGCCTCAGGGGAAGATTCAGGGGTCACTGGGCTTGGTTCTTCTGGTCTGTTCCGTATCTTGAATaGGATATTTGTCTGACATAT +
Preference number: 4 (lower is better)
Translates to: GTCLRGRFRGHWAWFFWSVPYLE*DICLTY
Trigger: ATATGTCAGACAAATATCCCATTCAAGATACGGAAC...AGACCAGAAGAACCAAGCCCAGTGACCCCTGAATCTTCCCCTGAGGCAGGTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642595.1
CDS-3UTR CCA 90 bp CAGTGTCCACTGTTCCACGTCCTTGTCCTAAACTCTTATAAAACAACAGATTCAGCAAGTCACTTATGGTaGGGGCCCGGAGCAAGCAGG +
Preference number: 4 (lower is better)
Translates to: QCPLFHVLVLNSYKTTDSASHLW*GPGASR
Trigger: CCTGCTTGCTCCGGGCCCCCACCATAAGTGACTTGC...TGAATCTGTTGTTTTATAAGAGTTTAGGACAAGGACGTGGAACAGTGGACACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR CCA 90 bp CAGTGTCCACTGTTCCACGTCCTTGTCCTAAACTCTTATAAAACAACAGATTCAGACAAGTCGGCGATGTaGTGGTACAGGGGAACCCCC +
Preference number: 4 (lower is better)
Translates to: QCPLFHVLVLNSYKTTDSDKSAM*WYRGTP
Trigger: GGGGGTTCCCCTGTACCACCACATCGCCGACTTGTC...TGAATCTGTTGTTTTATAAGAGTTTAGGACAAGGACGTGGAACAGTGGACACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR TCA 90 bp GCATTCCTTGTAGCTGTTTTCTTTGAAACCGTGGGAATGGCACTGATCAGGAGAAGGAGTTGTCCTTGCTaGTCTCTGGAAGAGGATCTC +
Preference number: 4 (lower is better)
Translates to: AFLVAVFFETVGMALIRRRSCPC*SLEEDL
Trigger: GAGATCCTCTTCCAGAGATCAGCAAGGACAACTCCT...TCTCCTGATCAGTGCCATTCCCACGGTTTCAAAGAAAACAGCTACAAGGAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR TCA 90 bp GCATTCCTTGTAGCTGTTTTCTTTGAAACCGTGGGAATGGCACTGATCAGGAGAATCCGGAGAGGCCAATaGAGGAAGAAGAAGAGCTCT +
Preference number: 4 (lower is better)
Translates to: AFLVAVFFETVGMALIRRIRRGQ*RKKKSS
Trigger: AGAGCTCTTCTTCTTCCTTCATTGGCCTCTCCGGAT...TCTCCTGATCAGTGCCATTCCCACGGTTTCAAAGAAAACAGCTACAAGGAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR TCA 90 bp CAGTGTCCACTGTTCCACGTCCTTGTCCTAAACTCTTATAAAACAACAGATTCAAGCCAGACAGTCAGGTaGGATGTACCTGGTGGGGTC +
Preference number: 4 (lower is better)
Translates to: QCPLFHVLVLNSYKTTDSSQTVR*DVPGGV
Trigger: GACCCCACCAGGTACATCTCACCTGACTGTCTGGCT...TGAATCTGTTGTTTTATAAGAGTTTAGGACAAGGACGTGGAACAGTGGACACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR GCA 90 bp GCATTCCTTGTAGCTGTTTTCTTTGAAACCGTGGGAATGGCACTGATCAGGAGAAGAAGTGGAGGGTGCTaGAGACACTCAGGTAAGCAT +
Preference number: 4 (lower is better)
Translates to: AFLVAVFFETVGMALIRRRSGGC*RHSGKH
Trigger: ATGCTTACCTGAGTGTCTGCAGCACCCTCCACTTCT...TCTCCTGATCAGTGCCATTCCCACGGTTTCAAAGAAAACAGCTACAAGGAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR GCA 90 bp CAGTGTCCACTGTTCCACGTCCTTGTCCTAAACTCTTATAAAACAACAGATTCAGGCCCCTACAAATGTTaGTCGGGGGTCTTGAGCTGC +
Preference number: 4 (lower is better)
Translates to: QCPLFHVLVLNSYKTTDSGPYKC*SGVLSC
Trigger: GCAGCTCAAGACCCCCGAGCAACATTTGTAGGGGCC...TGAATCTGTTGTTTTATAAGAGTTTAGGACAAGGACGTGGAACAGTGGACACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR GCA 90 bp CAGTGTCCACTGTTCCACGTCCTTGTCCTAAACTCTTATAAAACAACAGATTCAGTCTCCAGACTGGTGTaGAGTGGCGCAATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: QCPLFHVLVLNSYKTTDSVSRLV*SGAISA
Trigger: AGCCGAGATTGCGCCACTGCACACCAGTCTGGAGAC...TGAATCTGTTGTTTTATAAGAGTTTAGGACAAGGACGTGGAACAGTGGACACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR CCA 90 bp CCGGAGATGACACTGGAGGGTCACGTGGCTCCGGTGATTTGGGCCAATTACATGGTTCCGTATCTTGAATaGGATATTTGTCTGACATAT +
Preference number: 4 (lower is better)
Translates to: PEMTLEGHVAPVIWANYMVPYLE*DICLTY
Trigger: ATATGTCAGACAAATATCCCATTCAAGATACGGAAC...CATGTAATTGGCCCAAATCACCGGAGCCACGTGACCCTCCAGTGTCATCTCCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334232.9
ENST00000359362.6
CDS-3UTR CCA 90 bp GCATTCCTTGTAGCTGTTTTCTTTGAAACCGTGGGAATGGCACTGATCAGGAGAGTCCTTGCTGATCTCTaGAAGAGGATCTCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: AFLVAVFFETVGMALIRRVLADL*KRISSA
Trigger: AGCACTGGAGATCCTCTTCCAGAGATCAGCAAGGAC...TCTCCTGATCAGTGCCATTCCCACGGTTTCAAAGAAAACAGCTACAAGGAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR CCA 90 bp GCATTCCTTGTAGCTGTTTTCTTTGAAACCGTGGGAATGGCACTGATCAGGAGACCAGTTTTTCACCGTTaGGTGACACGGATCCAGCTT +
Preference number: 4 (lower is better)
Translates to: AFLVAVFFETVGMALIRRPVFHR*VTRIQL
Trigger: AAGCTGGATCCGTGTCACCCAACGGTGAAAAACTGG...TCTCCTGATCAGTGCCATTCCCACGGTTTCAAAGAAAACAGCTACAAGGAATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR CCA 90 bp CAGTGTCCACTGTTCCACGTCCTTGTCCTAAACTCTTATAAAACAACAGATTCAGCAAGAACTCCAAGGTaGGGCTCTGTGGCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: QCPLFHVLVLNSYKTTDSARTPR*GSVASA
Trigger: AGCAGAGGCCACAGAGCCCCACCTTGGAGTTCTTGC...TGAATCTGTTGTTTTATAAGAGTTTAGGACAAGGACGTGGAACAGTGGACACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR CCA 90 bp CAGTGTCCACTGTTCCACGTCCTTGTCCTAAACTCTTATAAAACAACAGATTCAAAGTCGGCGATGTGGTaGTACAGGGGAACCCCCTTC +
Preference number: 4 (lower is better)
Translates to: QCPLFHVLVLNSYKTTDSKSAMW*YRGTPF
Trigger: GAAGGGGGTTCCCCTGTACCACCACATCGCCGACTT...TGAATCTGTTGTTTTATAAGAGTTTAGGACAAGGACGTGGAACAGTGGACACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR TCA 90 bp GCATTCCTTGTAGCTGTTTTCTTTGAAACCGTGGGAATGGCACTGATCAGGAGATTTTTCACCGTTGGGTaGCACGGATCCAGCTTTATC +
Preference number: 4 (lower is better)
Translates to: AFLVAVFFETVGMALIRRFFTVG*HGSSFI
Trigger: GATAAAGCTGGATCCGTGTCACCCAACGGTGAAAAA...TCTCCTGATCAGTGCCATTCCCACGGTTTCAAAGAAAACAGCTACAAGGAATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR CCA 90 bp GCATTCCTTGTAGCTGTTTTCTTTGAAACCGTGGGAATGGCACTGATCAGGAGACAAAACTGCCAGCTTTaGGGAAAACCAGTGTCCACT +
Preference number: 4 (lower is better)
Translates to: AFLVAVFFETVGMALIRRQNCQL*GKPVST
Trigger: AGTGGACACTGGTTTTCCCCAAAGCTGGCAGTTTTG...TCTCCTGATCAGTGCCATTCCCACGGTTTCAAAGAAAACAGCTACAAGGAATGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR TCA 90 bp GCATTCCTTGTAGCTGTTTTCTTTGAAACCGTGGGAATGGCACTGATCAGGAGAGGGAGTTCCGTATCTTaGATGGGATATTTGTCTGAC +
Preference number: 4 (lower is better)
Translates to: AFLVAVFFETVGMALIRRGSSVS*MGYLSD
Trigger: GTCAGACAAATATCCCATTCAAGATACGGAACTCCC...TCTCCTGATCAGTGCCATTCCCACGGTTTCAAAGAAAACAGCTACAAGGAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR TCA 90 bp GCATTCCTTGTAGCTGTTTTCTTTGAAACCGTGGGAATGGCACTGATCAGGAGAGTAAGTCCTGATCATTaGGCAAGTCACTTATGGTGG +
Preference number: 4 (lower is better)
Translates to: AFLVAVFFETVGMALIRRVSPDH*ASHLWW
Trigger: CCACCATAAGTGACTTGCTCAATGATCAGGACTTAC...TCTCCTGATCAGTGCCATTCCCACGGTTTCAAAGAAAACAGCTACAAGGAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR TCA 90 bp GCATTCCTTGTAGCTGTTTTCTTTGAAACCGTGGGAATGGCACTGATCAGGAGAGATCCAGCTTTATCCTaGTCACGTCTAGTAAGTCCT +
Preference number: 4 (lower is better)
Translates to: AFLVAVFFETVGMALIRRDPALS*SRLVSP
Trigger: AGGACTTACTAGACGTGATCAGGATAAAGCTGGATC...TCTCCTGATCAGTGCCATTCCCACGGTTTCAAAGAAAACAGCTACAAGGAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR TCA 90 bp GCATTCCTTGTAGCTGTTTTCTTTGAAACCGTGGGAATGGCACTGATCAGGAGATGTAGCTGTTTTCTTTaGAACCGTGGGAATGGCACT +
Preference number: 4 (lower is better)
Translates to: AFLVAVFFETVGMALIRRCSCFL*NRGNGT
Trigger: AGTGCCATTCCCACGGTTTCAAAGAAAACAGCTACA...TCTCCTGATCAGTGCCATTCCCACGGTTTCAAAGAAAACAGCTACAAGGAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR TCA 90 bp CAGTGTCCACTGTTCCACGTCCTTGTCCTAAACTCTTATAAAACAACAGATTCAGGGCTCAACAGGCTTTaGGACACCCTTCCCCATATA +
Preference number: 4 (lower is better)
Translates to: QCPLFHVLVLNSYKTTDSGLNRL*DTLPHI
Trigger: TATATGGGGAAGGGTGTCTCAAAGCCTGTTGAGCCC...TGAATCTGTTGTTTTATAAGAGTTTAGGACAAGGACGTGGAACAGTGGACACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR CCA 90 bp GCATTCCTTGTAGCTGTTTTCTTTGAAACCGTGGGAATGGCACTGATCAGGAGAATTGAACACCGGGACTaGCAAGATGACTTTGGAGTT +
Preference number: 4 (lower is better)
Translates to: AFLVAVFFETVGMALIRRIEHRD*QDDFGV
Trigger: AACTCCAAAGTCATCTTGCCAGTCCCGGTGTTCAAT...TCTCCTGATCAGTGCCATTCCCACGGTTTCAAAGAAAACAGCTACAAGGAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR TCA 90 bp CAGTGTCCACTGTTCCACGTCCTTGTCCTAAACTCTTATAAAACAACAGATTCAAGGAGTTGTCCTTGCTaGTCTCTGGAAGAGGATCTC +
Preference number: 4 (lower is better)
Translates to: QCPLFHVLVLNSYKTTDSRSCPC*SLEEDL
Trigger: GAGATCCTCTTCCAGAGATCAGCAAGGACAACTCCT...TGAATCTGTTGTTTTATAAGAGTTTAGGACAAGGACGTGGAACAGTGGACACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR TCA 90 bp GCATTCCTTGTAGCTGTTTTCTTTGAAACCGTGGGAATGGCACTGATCAGGAGAACGTCTAGTAAGTCCTaGTCATTGAGCAAGTCACTT +
Preference number: 4 (lower is better)
Translates to: AFLVAVFFETVGMALIRRTSSKS*SLSKSL
Trigger: AAGTGACTTGCTCAATGATCAGGACTTACTAGACGT...TCTCCTGATCAGTGCCATTCCCACGGTTTCAAAGAAAACAGCTACAAGGAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR TCA 90 bp CAGTGTCCACTGTTCCACGTCCTTGTCCTAAACTCTTATAAAACAACAGATTCACCGTGGGAATGGCACTaGTCAGGAGAGATGTTACAT +
Preference number: 4 (lower is better)
Translates to: QCPLFHVLVLNSYKTTDSPWEWH*SGEMLH
Trigger: ATGTAACATCTCTCCTGATCAGTGCCATTCCCACGG...TGAATCTGTTGTTTTATAAGAGTTTAGGACAAGGACGTGGAACAGTGGACACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR TCA 90 bp CAGTGTCCACTGTTCCACGTCCTTGTCCTAAACTCTTATAAAACAACAGATTCAGCTCCTCTTCAATTCTaGGGAGCTGGTTGTACTTGG +
Preference number: 4 (lower is better)
Translates to: QCPLFHVLVLNSYKTTDSAPLQF*GAGCTW
Trigger: CCAAGTACAACCAGCTCCTCAGAATTGAAGAGGAGC...TGAATCTGTTGTTTTATAAGAGTTTAGGACAAGGACGTGGAACAGTGGACACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR GCA 90 bp GCATTCCTTGTAGCTGTTTTCTTTGAAACCGTGGGAATGGCACTGATCAGGAGAGAAGAGGATCTCCAGTaGTATCTGGAAAGCCATTTT +
Preference number: 4 (lower is better)
Translates to: AFLVAVFFETVGMALIRREEDLQ*YLESHF
Trigger: AAAATGGCTTTCCAGATAGCACTGGAGATCCTCTTC...TCTCCTGATCAGTGCCATTCCCACGGTTTCAAAGAAAACAGCTACAAGGAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR GCA 90 bp CAGTGTCCACTGTTCCACGTCCTTGTCCTAAACTCTTATAAAACAACAGATTCAAGAAGTGGAGGGTGCTaGAGACACTCAGGTAAGCAT +
Preference number: 4 (lower is better)
Translates to: QCPLFHVLVLNSYKTTDSRSGGC*RHSGKH
Trigger: ATGCTTACCTGAGTGTCTGCAGCACCCTCCACTTCT...TGAATCTGTTGTTTTATAAGAGTTTAGGACAAGGACGTGGAACAGTGGACACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR CCA 90 bp GCATTCCTTGTAGCTGTTTTCTTTGAAACCGTGGGAATGGCACTGATCAGGAGAGGCTTCTTAATTCTCTaGAGTTTGCCATGGAAGAAG +
Preference number: 4 (lower is better)
Translates to: AFLVAVFFETVGMALIRRGFLIL*SLPWKK
Trigger: CTTCTTCCATGGCAAACTCCAGAGAATTAAGAAGCC...TCTCCTGATCAGTGCCATTCCCACGGTTTCAAAGAAAACAGCTACAAGGAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334232.9
CDS-3UTR CCA 90 bp GCATTCCTTGTAGCTGTTTTCTTTGAAACCGTGGGAATGGCACTGATCAGGAGAGTCTGTGTCTTCCACTaGTTCCTTTACCATATGATC +
Preference number: 4 (lower is better)
Translates to: AFLVAVFFETVGMALIRRVCVFH*FLYHMI
Trigger: GATCATATGGTAAAGGAACCAGTGGAAGACACAGAC...TCTCCTGATCAGTGCCATTCCCACGGTTTCAAAGAAAACAGCTACAAGGAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR CCA 90 bp CAGTGTCCACTGTTCCACGTCCTTGTCCTAAACTCTTATAAAACAACAGATTCACCAGTTTTTCACCGTTaGGTGACACGGATCCAGCTT +
Preference number: 4 (lower is better)
Translates to: QCPLFHVLVLNSYKTTDSPVFHR*VTRIQL
Trigger: AAGCTGGATCCGTGTCACCCAACGGTGAAAAACTGG...TGAATCTGTTGTTTTATAAGAGTTTAGGACAAGGACGTGGAACAGTGGACACTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR CCA 90 bp CAGTGTCCACTGTTCCACGTCCTTGTCCTAAACTCTTATAAAACAACAGATTCATGCTGTGGGTATGTCTaGGGCTATCAACAGTCTCAG +
Preference number: 4 (lower is better)
Translates to: QCPLFHVLVLNSYKTTDSCCGYV*GYQQSQ
Trigger: CTGAGACTGTTGATAGCCCCAGACATACCCACAGCA...TGAATCTGTTGTTTTATAAGAGTTTAGGACAAGGACGTGGAACAGTGGACACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR CCA 90 bp CAGTGTCCACTGTTCCACGTCCTTGTCCTAAACTCTTATAAAACAACAGATTCAGTGGCTCCGGTGATTTaGGCCAATTACATGACTGCA +
Preference number: 4 (lower is better)
Translates to: QCPLFHVLVLNSYKTTDSVAPVI*ANYMTA
Trigger: TGCAGTCATGTAATTGGCCCAAATCACCGGAGCCAC...TGAATCTGTTGTTTTATAAGAGTTTAGGACAAGGACGTGGAACAGTGGACACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR TCA 90 bp CAGTGTCCACTGTTCCACGTCCTTGTCCTAAACTCTTATAAAACAACAGATTCATTTTTCACCGTTGGGTaGCACGGATCCAGCTTTATC +
Preference number: 4 (lower is better)
Translates to: QCPLFHVLVLNSYKTTDSFFTVG*HGSSFI
Trigger: GATAAAGCTGGATCCGTGTCACCCAACGGTGAAAAA...TGAATCTGTTGTTTTATAAGAGTTTAGGACAAGGACGTGGAACAGTGGACACTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR TCA 90 bp CAGTGTCCACTGTTCCACGTCCTTGTCCTAAACTCTTATAAAACAACAGATTCATCTGAAGAGACCTTCTaGGGTGAAGAGATCAACCTC +
Preference number: 4 (lower is better)
Translates to: QCPLFHVLVLNSYKTTDSSEETF*GEEINL
Trigger: GAGGTTGATCTCTTCACCTCAGAAGGTCTCTTCAGA...TGAATCTGTTGTTTTATAAGAGTTTAGGACAAGGACGTGGAACAGTGGACACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR CCA 90 bp GCATTCCTTGTAGCTGTTTTCTTTGAAACCGTGGGAATGGCACTGATCAGGAGATTACATATAATGCTGTaGGTATGTCTGGGGCTATCA +
Preference number: 4 (lower is better)
Translates to: AFLVAVFFETVGMALIRRLHIML*VCLGLS
Trigger: TGATAGCCCCAGACATACCCACAGCATTATATGTAA...TCTCCTGATCAGTGCCATTCCCACGGTTTCAAAGAAAACAGCTACAAGGAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR TCA 90 bp CAGTGTCCACTGTTCCACGTCCTTGTCCTAAACTCTTATAAAACAACAGATTCAGGGAGTTCCGTATCTTaGATGGGATATTTGTCTGAC +
Preference number: 4 (lower is better)
Translates to: QCPLFHVLVLNSYKTTDSGSSVS*MGYLSD
Trigger: GTCAGACAAATATCCCATTCAAGATACGGAACTCCC...TGAATCTGTTGTTTTATAAGAGTTTAGGACAAGGACGTGGAACAGTGGACACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR TCA 90 bp GCATTCCTTGTAGCTGTTTTCTTTGAAACCGTGGGAATGGCACTGATCAGGAGACTGATTTTTCATATCTaGATTTCGTGGGCAGTTCAA +
Preference number: 4 (lower is better)
Translates to: AFLVAVFFETVGMALIRRLIFHI*ISWAVQ
Trigger: TTGAACTGCCCACGAAATTCAGATATGAAAAATCAG...TCTCCTGATCAGTGCCATTCCCACGGTTTCAAAGAAAACAGCTACAAGGAATGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR TCA 90 bp CAGTGTCCACTGTTCCACGTCCTTGTCCTAAACTCTTATAAAACAACAGATTCAGTAAGTCCTGATCATTaGGCAAGTCACTTATGGTGG +
Preference number: 4 (lower is better)
Translates to: QCPLFHVLVLNSYKTTDSVSPDH*ASHLWW
Trigger: CCACCATAAGTGACTTGCTCAATGATCAGGACTTAC...TGAATCTGTTGTTTTATAAGAGTTTAGGACAAGGACGTGGAACAGTGGACACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR TCA 90 bp CAGTGTCCACTGTTCCACGTCCTTGTCCTAAACTCTTATAAAACAACAGATTCAGATCCAGCTTTATCCTaGTCACGTCTAGTAAGTCCT +
Preference number: 4 (lower is better)
Translates to: QCPLFHVLVLNSYKTTDSDPALS*SRLVSP
Trigger: AGGACTTACTAGACGTGATCAGGATAAAGCTGGATC...TGAATCTGTTGTTTTATAAGAGTTTAGGACAAGGACGTGGAACAGTGGACACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR TCA 90 bp CAGTGTCCACTGTTCCACGTCCTTGTCCTAAACTCTTATAAAACAACAGATTCAATCTTCAACGTGGCATaGATCCATTCCGATTGTAGG +
Preference number: 4 (lower is better)
Translates to: QCPLFHVLVLNSYKTTDSIFNVA*IHSDCR
Trigger: CCTACAATCGGAATGGATTCATGCCACGTTGAAGAT...TGAATCTGTTGTTTTATAAGAGTTTAGGACAAGGACGTGGAACAGTGGACACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR TCA 90 bp CAGTGTCCACTGTTCCACGTCCTTGTCCTAAACTCTTATAAAACAACAGATTCATGTAGCTGTTTTCTTTaGAACCGTGGGAATGGCACT +
Preference number: 4 (lower is better)
Translates to: QCPLFHVLVLNSYKTTDSCSCFL*NRGNGT
Trigger: AGTGCCATTCCCACGGTTTCAAAGAAAACAGCTACA...TGAATCTGTTGTTTTATAAGAGTTTAGGACAAGGACGTGGAACAGTGGACACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR CCA 90 bp CAGTGTCCACTGTTCCACGTCCTTGTCCTAAACTCTTATAAAACAACAGATTCAATTGAACACCGGGACTaGCAAGATGACTTTGGAGTT +
Preference number: 4 (lower is better)
Translates to: QCPLFHVLVLNSYKTTDSIEHRD*QDDFGV
Trigger: AACTCCAAAGTCATCTTGCCAGTCCCGGTGTTCAAT...TGAATCTGTTGTTTTATAAGAGTTTAGGACAAGGACGTGGAACAGTGGACACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR GCA 90 bp CAGTGTCCACTGTTCCACGTCCTTGTCCTAAACTCTTATAAAACAACAGATTCAGAAGAGGATCTCCAGTaGTATCTGGAAAGCCATTTT +
Preference number: 4 (lower is better)
Translates to: QCPLFHVLVLNSYKTTDSEEDLQ*YLESHF
Trigger: AAAATGGCTTTCCAGATAGCACTGGAGATCCTCTTC...TGAATCTGTTGTTTTATAAGAGTTTAGGACAAGGACGTGGAACAGTGGACACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR CCA 90 bp CAGTGTCCACTGTTCCACGTCCTTGTCCTAAACTCTTATAAAACAACAGATTCAGTCTGTGTCTTCCACTaGTTCCTTTACCATATGATC +
Preference number: 4 (lower is better)
Translates to: QCPLFHVLVLNSYKTTDSVCVFH*FLYHMI
Trigger: GATCATATGGTAAAGGAACCAGTGGAAGACACAGAC...TGAATCTGTTGTTTTATAAGAGTTTAGGACAAGGACGTGGAACAGTGGACACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR CCA 90 bp GCATTCCTTGTAGCTGTTTTCTTTGAAACCGTGGGAATGGCACTGATCAGGAGAGTTCCGTATCTTGAATaGGATATTTGTCTGACATAT +
Preference number: 4 (lower is better)
Translates to: AFLVAVFFETVGMALIRRVPYLE*DICLTY
Trigger: ATATGTCAGACAAATATCCCATTCAAGATACGGAAC...TCTCCTGATCAGTGCCATTCCCACGGTTTCAAAGAAAACAGCTACAAGGAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR CCA 90 bp GCATTCCTTGTAGCTGTTTTCTTTGAAACCGTGGGAATGGCACTGATCAGGAGAATTTTATCTTCAACGTaGCATGAATCCATTCCGATT +
Preference number: 4 (lower is better)
Translates to: AFLVAVFFETVGMALIRRILSST*HESIPI
Trigger: AATCGGAATGGATTCATGCCACGTTGAAGATAAAAT...TCTCCTGATCAGTGCCATTCCCACGGTTTCAAAGAAAACAGCTACAAGGAATGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR CCA 90 bp CAGTGTCCACTGTTCCACGTCCTTGTCCTAAACTCTTATAAAACAACAGATTCATTACATATAATGCTGTaGGTATGTCTGGGGCTATCA +
Preference number: 4 (lower is better)
Translates to: QCPLFHVLVLNSYKTTDSLHIML*VCLGLS
Trigger: TGATAGCCCCAGACATACCCACAGCATTATATGTAA...TGAATCTGTTGTTTTATAAGAGTTTAGGACAAGGACGTGGAACAGTGGACACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
3UTR CAA 72 bp CTAAACTCTTATAAAACAACAGATTCACATTCCTTCTaGACCTGTGGTTGTTTCAACATCCGGAGAGGCCAA +
Preference number: 4 (lower is better)
Translates to: LNSYKTTDSHSF*TCGCFNIRRGQ
Trigger: TTGGCCTCTCCGGATGTTGAAACAACCACAGGTCAAGAAGGAATGTGAATCTGTTGTTTTATAAGAGTTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR TCA 90 bp CAGTGTCCACTGTTCCACGTCCTTGTCCTAAACTCTTATAAAACAACAGATTCACTGATTTTTCATATCTaGATTTCGTGGGCAGTTCAA +
Preference number: 4 (lower is better)
Translates to: QCPLFHVLVLNSYKTTDSLIFHI*ISWAVQ
Trigger: TTGAACTGCCCACGAAATTCAGATATGAAAAATCAG...TGAATCTGTTGTTTTATAAGAGTTTAGGACAAGGACGTGGAACAGTGGACACTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR CCA 90 bp CAGTGTCCACTGTTCCACGTCCTTGTCCTAAACTCTTATAAAACAACAGATTCAGTTCCGTATCTTGAATaGGATATTTGTCTGACATAT +
Preference number: 4 (lower is better)
Translates to: QCPLFHVLVLNSYKTTDSVPYLE*DICLTY
Trigger: ATATGTCAGACAAATATCCCATTCAAGATACGGAAC...TGAATCTGTTGTTTTATAAGAGTTTAGGACAAGGACGTGGAACAGTGGACACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR CCA 90 bp CAGTGTCCACTGTTCCACGTCCTTGTCCTAAACTCTTATAAAACAACAGATTCAATTTTATCTTCAACGTaGCATGAATCCATTCCGATT +
Preference number: 4 (lower is better)
Translates to: QCPLFHVLVLNSYKTTDSILSST*HESIPI
Trigger: AATCGGAATGGATTCATGCCACGTTGAAGATAAAAT...TGAATCTGTTGTTTTATAAGAGTTTAGGACAAGGACGTGGAACAGTGGACACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS TCA 90 bp GCTGGCAGGCCTCCGGGGCGCGGGAGGACCGTGGGACCACGGGGATaGAAAGTCCTGCGGTTCCGACGCGCCTGGAGCAAACCGTGGCTC +
Preference number: 5 (lower is better)
Translates to: AGRPPGRGRTVGPRG*KVLRFRRAWSKPWL
Trigger: GAGCCACGGTTTGCTCCAGGCGCGTCGGAACCGCAGGACTTTTCATCCCCGTGGTCCCACGGTCCTCCCGCGCCCCGGAGGCCTGCCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359362.6
ENST00000642595.1
CDS GCA 90 bp TGCGGTTCCGACGCGCCTGGAGCAAACCGTGGCTCTGCGCGCCCCTaGCCTCCTCCGCCTTCCCCTCCCTTCTTCTTCTCCTCCTTCGCT +
Preference number: 5 (lower is better)
Translates to: CGSDAPGANRGSARP*PPPPSPPFFFSSFA
Trigger: AGCGAAGGAGGAGAAGAAGAAGGGAGGGGAAGGCGGAGGAGGGCAGGGGCGCGCAGAGCCACGGTTTGCTCCAGGCGCGTCGGAACCGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359362.6
ENST00000642595.1
CDS GCA 90 bp AGGGGTCTCCACGCTCCCGCTTGGGCCACTCCTCGTCCACCCACCTaGGCAGAACCTTCTCCACGTCGGCCCTGTGGTAGAGCCTGCAGA +
Preference number: 5 (lower is better)
Translates to: RGLHAPAWATPRPPT*AEPSPRRPCGRACR
Trigger: TCTGCAGGCTCTACCACAGGGCCGACGTGGAGAAGGTTCTGCGCAGGTGGGTGGACGAGGAGTGGCCCAAGCGGGAGCGTGGAGACCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS CCA 90 bp AGGGGCAGCAGCCACCGGCCCAGGGGTGCCAGCAGGCCCAGAGTGTaGCCCAGCATCTCAGCCACGATCCTCTGGAAGAGGATCTCCAGT +
Preference number: 5 (lower is better)
Translates to: RGSSHRPRGASRPRV*PSISATILWKRISS
Trigger: ACTGGAGATCCTCTTCCAGAGGATCGTGGCTGAGATGCTGGGCCACACTCTGGGCCTGCTGGCACCCCTGGGCCGGTGGCTGCTGCCCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642595.1
CDS CCA 90 bp CCTTTACCATATGATCTGCGCGCAGAGGGTCGTCCGGTGAAGCCATaGCGGCGGGTTAGGGGCAAACGAGCGTCCGAGCGGGGCTGGCAG +
Preference number: 5 (lower is better)
Translates to: PLPYDLRAEGRPVKP*RRVRGKRASERGWQ
Trigger: CTGCCAGCCCCGCTCGGACGCTCGTTTGCCCCTAACCCGCCGCCATGGCTTCACCGGACGACCCTCTGCGCGCAGATCATATGGTAAAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359362.6
ENST00000642595.1
CDS GCA 90 bp CCCACCTGCGCAGAACCTTCTCCACGTCGGCCCTGTGGTAGAGCCTaGAGAGCTCCATCAGCTGGCCCACCGTCCTCTGACTGTTCCGGA +
Preference number: 5 (lower is better)
Translates to: PTCAEPSPRRPCGRA*RAPSAGPPSSDCSG
Trigger: TCCGGAACAGTCAGAGGACGGTGGGCCAGCTGATGGAGCTCTGCAGGCTCTACCACAGGGCCGACGTGGAGAAGGTTCTGCGCAGGTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR CAA 90 bp CCGGAGATGACACTGGAGGGTCACGTGGCTCCGGTGATTTGGGCCAATTACATGTCTCCACGCTCCCGCTaGGGCCACTCCTCGTCCACC +
Preference number: 5 (lower is better)
Translates to: PEMTLEGHVAPVIWANYMSPRSR*GHSSST
Trigger: GGTGGACGAGGAGTGGCCCAAGCGGGAGCGTGGAGA...CATGTAATTGGCCCAAATCACCGGAGCCACGTGACCCTCCAGTGTCATCTCCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334232.9
ENST00000359362.6
CDS CCA 90 bp CGTCCTCTGACTGTTCCGGAGCAAGAACTCCAAGGTGGGGCTCTGTaGCCTCTGCTCCAGGAAGCACAATTCGTCATAGGACATCCCCCA +
Preference number: 5 (lower is better)
Translates to: RPLTVPEQELQGGAL*PLLQEAQFVIGHPP
Trigger: TGGGGGATGTCCTATGACGAATTGTGCTTCCTGGAGCAGAGGCCACAGAGCCCCACCTTGGAGTTCTTGCTCCGGAACAGTCAGAGGACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR CAA 90 bp CCGGAGATGACACTGGAGGGTCACGTGGCTCCGGTGATTTGGGCCAATTACATGGAAGATGCTCGCTGGTaGTCTGGCCAGAGTCAAACC +
Preference number: 5 (lower is better)
Translates to: PEMTLEGHVAPVIWANYMEDARW*SGQSQT
Trigger: GGTTTGACTCTGGCCAGACAACCAGCGAGCATCTTC...CATGTAATTGGCCCAAATCACCGGAGCCACGTGACCCTCCAGTGTCATCTCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334232.9
CDS-3UTR CAA 90 bp CCGGAGATGACACTGGAGGGTCACGTGGCTCCGGTGATTTGGGCCAATTACATGCGTGGCTCCGGTGATTaGGGCCAATTACATGACTGC +
Preference number: 5 (lower is better)
Translates to: PEMTLEGHVAPVIWANYMRGSGD*GQLHDC
Trigger: GCAGTCATGTAATTGGCCCAAATCACCGGAGCCACG...CATGTAATTGGCCCAAATCACCGGAGCCACGTGACCCTCCAGTGTCATCTCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334232.9
ENST00000359362.6
CDS-3UTR CAA 90 bp GCATTCCTTGTAGCTGTTTTCTTTGAAACCGTGGGAATGGCACTGATCAGGAGATCTCCACGCTCCCGCTaGGGCCACTCCTCGTCCACC +
Preference number: 5 (lower is better)
Translates to: AFLVAVFFETVGMALIRRSPRSR*GHSSST
Trigger: GGTGGACGAGGAGTGGCCCAAGCGGGAGCGTGGAGA...TCTCCTGATCAGTGCCATTCCCACGGTTTCAAAGAAAACAGCTACAAGGAATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR CAA 90 bp CCGGAGATGACACTGGAGGGTCACGTGGCTCCGGTGATTTGGGCCAATTACATGTTGCAGGAGTTGTCCTaGCTGATCTCTGGAAGAGGA +
Preference number: 5 (lower is better)
Translates to: PEMTLEGHVAPVIWANYMLQELS*LISGRG
Trigger: TCCTCTTCCAGAGATCAGCAAGGACAACTCCTGCAA...CATGTAATTGGCCCAAATCACCGGAGCCACGTGACCCTCCAGTGTCATCTCCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000334232.9
ENST00000359362.6
CDS CCA 90 bp AAAAGGTGGGCGCCTTCCACAGAGGTTCACGTGTTGCAGCTTCATTaGGCAGCACATGGACGGCAGCTTGGAAGTAGGTCTTTGAGTTTG +
Preference number: 5 (lower is better)
Translates to: KRWAPSTEVHVLQLH*AAHGRQLGSRSLSL
Trigger: CAAACTCAAAGACCTACTTCCAAGCTGCCGTCCATGTGCTGCCCAATGAAGCTGCAACACGTGAACCTCTGTGGAAGGCGCCCACCTTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439430.5
CDS-3UTR CAA 90 bp GCATTCCTTGTAGCTGTTTTCTTTGAAACCGTGGGAATGGCACTGATCAGGAGACAAGGGGCACCAGTCTaGAGCTGCCCAGGTCACAGC +
Preference number: 5 (lower is better)
Translates to: AFLVAVFFETVGMALIRRQGAPV*SCPGHS
Trigger: GCTGTGACCTGGGCAGCTCAAGACTGGTGCCCCTTG...TCTCCTGATCAGTGCCATTCCCACGGTTTCAAAGAAAACAGCTACAAGGAATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR CAA 90 bp CCGGAGATGACACTGGAGGGTCACGTGGCTCCGGTGATTTGGGCCAATTACATGCAAGTACAGTTTTCTTaGCAGGAGTTGTCCTTGCTG +
Preference number: 5 (lower is better)
Translates to: PEMTLEGHVAPVIWANYMQVQFS*QELSLL
Trigger: CAGCAAGGACAACTCCTGCAAAGAAAACTGTACTTG...CATGTAATTGGCCCAAATCACCGGAGCCACGTGACCCTCCAGTGTCATCTCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000334232.9
ENST00000359362.6
CDS-3UTR CAA 90 bp CAGTGTCCACTGTTCCACGTCCTTGTCCTAAACTCTTATAAAACAACAGATTCATCTCCACGCTCCCGCTaGGGCCACTCCTCGTCCACC +
Preference number: 5 (lower is better)
Translates to: QCPLFHVLVLNSYKTTDSSPRSR*GHSSST
Trigger: GGTGGACGAGGAGTGGCCCAAGCGGGAGCGTGGAGA...TGAATCTGTTGTTTTATAAGAGTTTAGGACAAGGACGTGGAACAGTGGACACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR CAA 90 bp GCATTCCTTGTAGCTGTTTTCTTTGAAACCGTGGGAATGGCACTGATCAGGAGACGGCCCCTACAAATGTaGCTCGGGGGTCTTGAGCTG +
Preference number: 5 (lower is better)
Translates to: AFLVAVFFETVGMALIRRRPLQM*LGGLEL
Trigger: CAGCTCAAGACCCCCGAGCAACATTTGTAGGGGCCG...TCTCCTGATCAGTGCCATTCCCACGGTTTCAAAGAAAACAGCTACAAGGAATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS TCA 90 bp CATTCCTTCTTGACCTGTGGTTGTTTCAACATCCGGAGAGGCCAATaGAGGAAGAAGAAGAGCTCTAGAAGTGCCTGGAGGGGTCTCCAC +
Preference number: 5 (lower is better)
Translates to: HSFLTCGCFNIRRGQ*RKKKSSRSAWRGLH
Trigger: GTGGAGACCCCTCCAGGCACTTCTAGAGCTCTTCTTCTTCCTTCATTGGCCTCTCCGGATGTTGAAACAACCACAGGTCAAGAAGGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR CAA 90 bp CCGGAGATGACACTGGAGGGTCACGTGGCTCCGGTGATTTGGGCCAATTACATGACATCCCCCATTTGCTaGCAAAATTCCTCCAGTTTT +
Preference number: 5 (lower is better)
Translates to: PEMTLEGHVAPVIWANYMTSPIC*QNSSSF
Trigger: AAAACTGGAGGAATTTTGCAAGCAAATGGGGGATGT...CATGTAATTGGCCCAAATCACCGGAGCCACGTGACCCTCCAGTGTCATCTCCGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000334232.9
ENST00000359362.6
CDS-3UTR CAA 90 bp GCATTCCTTGTAGCTGTTTTCTTTGAAACCGTGGGAATGGCACTGATCAGGAGATCAACAGCACTAGCTTaGCAGGCAGCGAGGGACACT +
Preference number: 5 (lower is better)
Translates to: AFLVAVFFETVGMALIRRSTALA*QAARDT
Trigger: AGTGTCCCTCGCTGCCTGCAAAGCTAGTGCTGTTGA...TCTCCTGATCAGTGCCATTCCCACGGTTTCAAAGAAAACAGCTACAAGGAATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR CAA 90 bp CAGTGTCCACTGTTCCACGTCCTTGTCCTAAACTCTTATAAAACAACAGATTCACAAGGGGCACCAGTCTaGAGCTGCCCAGGTCACAGC +
Preference number: 5 (lower is better)
Translates to: QCPLFHVLVLNSYKTTDSQGAPV*SCPGHS
Trigger: GCTGTGACCTGGGCAGCTCAAGACTGGTGCCCCTTG...TGAATCTGTTGTTTTATAAGAGTTTAGGACAAGGACGTGGAACAGTGGACACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS TCA 90 bp GAGAAGATGCTCGCTGGTTGTCTGGCCAGAGTCAAACCTTCTAGATaGAAGCTCTCTGGGGAATTTGTAGGTGGGAGGATAAACTTCCTC +
Preference number: 5 (lower is better)
Translates to: EKMLAGCLARVKPSR*KLSGEFVGGRINFL
Trigger: GAGGAAGTTTATCCTCCCACCTACAAATTCCCCAGAGAGCTTTCATCTAGAAGGTTTGACTCTGGCCAGACAACCAGCGAGCATCTTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334232.9
CDS CCA 90 bp CCATGGAAGAAGCAACAGATTGCGAGAAGATGCTCGCTGGTTGTCTaGCCAGAGTCAAACCTTCTAGATGAAAGCTCTCTGGGGAATTTG +
Preference number: 5 (lower is better)
Translates to: PWKKQQIARRCSLVV*PESNLLDESSLGNL
Trigger: CAAATTCCCCAGAGAGCTTTCATCTAGAAGGTTTGACTCTGGCCAGACAACCAGCGAGCATCTTCTCGCAATCTGTTGCTTCTTCCATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334232.9
CDS-3UTR CAA 90 bp GCATTCCTTGTAGCTGTTTTCTTTGAAACCGTGGGAATGGCACTGATCAGGAGATCCAGTTTTTCACCGTaGGGTGACACGGATCCAGCT +
Preference number: 5 (lower is better)
Translates to: AFLVAVFFETVGMALIRRSSFSP*GDTDPA
Trigger: AGCTGGATCCGTGTCACCCAACGGTGAAAAACTGGA...TCTCCTGATCAGTGCCATTCCCACGGTTTCAAAGAAAACAGCTACAAGGAATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR CAA 90 bp GCATTCCTTGTAGCTGTTTTCTTTGAAACCGTGGGAATGGCACTGATCAGGAGATGGGCTCAACAGGCTTaGAGACACCCTTCCCCATAT +
Preference number: 5 (lower is better)
Translates to: AFLVAVFFETVGMALIRRWAQQA*RHPSPY
Trigger: ATATGGGGAAGGGTGTCTCAAAGCCTGTTGAGCCCA...TCTCCTGATCAGTGCCATTCCCACGGTTTCAAAGAAAACAGCTACAAGGAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR CAA 90 bp GCATTCCTTGTAGCTGTTTTCTTTGAAACCGTGGGAATGGCACTGATCAGGAGACTGCCATTGATGACATaGAACACCGGGACTGGCAAG +
Preference number: 5 (lower is better)
Translates to: AFLVAVFFETVGMALIRRLPLMT*NTGTGK
Trigger: CTTGCCAGTCCCGGTGTTCAATGTCATCAATGGCAG...TCTCCTGATCAGTGCCATTCCCACGGTTTCAAAGAAAACAGCTACAAGGAATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR CAA 90 bp CAGTGTCCACTGTTCCACGTCCTTGTCCTAAACTCTTATAAAACAACAGATTCACGGCCCCTACAAATGTaGCTCGGGGGTCTTGAGCTG +
Preference number: 5 (lower is better)
Translates to: QCPLFHVLVLNSYKTTDSRPLQM*LGGLEL
Trigger: CAGCTCAAGACCCCCGAGCAACATTTGTAGGGGCCG...TGAATCTGTTGTTTTATAAGAGTTTAGGACAAGGACGTGGAACAGTGGACACTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS GCA 90 bp ATTCTCTGGAGTTTGCCATGGAAGAAGCAACAGATTGCGAGAAGATaGTCGCTGGTTGTCTGGCCAGAGTCAAACCTTCTAGATGAAAGC +
Preference number: 5 (lower is better)
Translates to: ILWSLPWKKQQIARR*SLVVWPESNLLDES
Trigger: GCTTTCATCTAGAAGGTTTGACTCTGGCCAGACAACCAGCGAGCATCTTCTCGCAATCTGTTGCTTCTTCCATGGCAAACTCCAGAGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334232.9
CDS GCA 90 bp TGGCTTCTTAATTCTCTGGAGTTTGCCATGGAAGAAGCAACAGATTaGGAGAAGATGCTCGCTGGTTGTCTGGCCAGAGTCAAACCTTCT +
Preference number: 5 (lower is better)
Translates to: WLLNSLEFAMEEATD*EKMLAGCLARVKPS
Trigger: AGAAGGTTTGACTCTGGCCAGACAACCAGCGAGCATCTTCTCGCAATCTGTTGCTTCTTCCATGGCAAACTCCAGAGAATTAAGAAGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334232.9
CDS CCA 90 bp CATGGCGATGTTGAGTTTGGCTTCTTAATTCTCTGGAGTTTGCCATaGAAGAAGCAACAGATTGCGAGAAGATGCTCGCTGGTTGTCTGG +
Preference number: 5 (lower is better)
Translates to: HGDVEFGFLILWSLP*KKQQIARRCSLVVW
Trigger: CCAGACAACCAGCGAGCATCTTCTCGCAATCTGTTGCTTCTTCCATGGCAAACTCCAGAGAATTAAGAAGCCAAACTCAACATCGCCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334232.9
CDS-3UTR CAA 90 bp GCATTCCTTGTAGCTGTTTTCTTTGAAACCGTGGGAATGGCACTGATCAGGAGAGTGACGTTCAGTTTCTaGCTAACCAGGACAGGTGCA +
Preference number: 5 (lower is better)
Translates to: AFLVAVFFETVGMALIRRVTFSF*LTRTGA
Trigger: TGCACCTGTCCTGGTTAGCAAGAAACTGAACGTCAC...TCTCCTGATCAGTGCCATTCCCACGGTTTCAAAGAAAACAGCTACAAGGAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR CAA 90 bp GCATTCCTTGTAGCTGTTTTCTTTGAAACCGTGGGAATGGCACTGATCAGGAGAAAGATGACTTTGGAGTaGCCAGACAAGTCGGCGATG +
Preference number: 5 (lower is better)
Translates to: AFLVAVFFETVGMALIRRKMTLE*PDKSAM
Trigger: CATCGCCGACTTGTCTGGCAACTCCAAAGTCATCTT...TCTCCTGATCAGTGCCATTCCCACGGTTTCAAAGAAAACAGCTACAAGGAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR CAA 90 bp GCATTCCTTGTAGCTGTTTTCTTTGAAACCGTGGGAATGGCACTGATCAGGAGAACTGGCAAGATGACTTaGGAGTTGCCAGACAAGTCG +
Preference number: 5 (lower is better)
Translates to: AFLVAVFFETVGMALIRRTGKMT*ELPDKS
Trigger: CGACTTGTCTGGCAACTCCAAAGTCATCTTGCCAGT...TCTCCTGATCAGTGCCATTCCCACGGTTTCAAAGAAAACAGCTACAAGGAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR CAA 90 bp CAGTGTCCACTGTTCCACGTCCTTGTCCTAAACTCTTATAAAACAACAGATTCATCAACAGCACTAGCTTaGCAGGCAGCGAGGGACACT +
Preference number: 5 (lower is better)
Translates to: QCPLFHVLVLNSYKTTDSSTALA*QAARDT
Trigger: AGTGTCCCTCGCTGCCTGCAAAGCTAGTGCTGTTGA...TGAATCTGTTGTTTTATAAGAGTTTAGGACAAGGACGTGGAACAGTGGACACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR CAA 90 bp CAGTGTCCACTGTTCCACGTCCTTGTCCTAAACTCTTATAAAACAACAGATTCACGTGGCTCCGGTGATTaGGGCCAATTACATGACTGC +
Preference number: 5 (lower is better)
Translates to: QCPLFHVLVLNSYKTTDSRGSGD*GQLHDC
Trigger: GCAGTCATGTAATTGGCCCAAATCACCGGAGCCACG...TGAATCTGTTGTTTTATAAGAGTTTAGGACAAGGACGTGGAACAGTGGACACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR CAA 90 bp CAGTGTCCACTGTTCCACGTCCTTGTCCTAAACTCTTATAAAACAACAGATTCAGGAAGAAGCAACAGATaGCGAGAAGATGCTCGCTGG +
Preference number: 5 (lower is better)
Translates to: QCPLFHVLVLNSYKTTDSGRSNR*REDARW
Trigger: CCAGCGAGCATCTTCTCGCAATCTGTTGCTTCTTCC...TGAATCTGTTGTTTTATAAGAGTTTAGGACAAGGACGTGGAACAGTGGACACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334232.9
CDS-3UTR CAA 90 bp GCATTCCTTGTAGCTGTTTTCTTTGAAACCGTGGGAATGGCACTGATCAGGAGATACCATATGATCCTCTaGGTGACCAGGAGCTTTAGT +
Preference number: 5 (lower is better)
Translates to: AFLVAVFFETVGMALIRRYHMIL*VTRSFS
Trigger: ACTAAAGCTCCTGGTCACCAAGAGGATCATATGGTA...TCTCCTGATCAGTGCCATTCCCACGGTTTCAAAGAAAACAGCTACAAGGAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334232.9
CDS-3UTR CAA 90 bp GCATTCCTTGTAGCTGTTTTCTTTGAAACCGTGGGAATGGCACTGATCAGGAGATTTTCTTTGCAGGAGTaGTCCTTGCTGATCTCTGGA +
Preference number: 5 (lower is better)
Translates to: AFLVAVFFETVGMALIRRFSLQE*SLLISG
Trigger: TCCAGAGATCAGCAAGGACAACTCCTGCAAAGAAAA...TCTCCTGATCAGTGCCATTCCCACGGTTTCAAAGAAAACAGCTACAAGGAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR CAA 90 bp GCATTCCTTGTAGCTGTTTTCTTTGAAACCGTGGGAATGGCACTGATCAGGAGACAAGTACAGTTTTCTTaGCAGGAGTTGTCCTTGCTG +
Preference number: 5 (lower is better)
Translates to: AFLVAVFFETVGMALIRRQVQFS*QELSLL
Trigger: CAGCAAGGACAACTCCTGCAAAGAAAACTGTACTTG...TCTCCTGATCAGTGCCATTCCCACGGTTTCAAAGAAAACAGCTACAAGGAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR CAA 90 bp CAGTGTCCACTGTTCCACGTCCTTGTCCTAAACTCTTATAAAACAACAGATTCATCCAGTTTTTCACCGTaGGGTGACACGGATCCAGCT +
Preference number: 5 (lower is better)
Translates to: QCPLFHVLVLNSYKTTDSSSFSP*GDTDPA
Trigger: AGCTGGATCCGTGTCACCCAACGGTGAAAAACTGGA...TGAATCTGTTGTTTTATAAGAGTTTAGGACAAGGACGTGGAACAGTGGACACTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR CAA 90 bp CAGTGTCCACTGTTCCACGTCCTTGTCCTAAACTCTTATAAAACAACAGATTCATGGGCTCAACAGGCTTaGAGACACCCTTCCCCATAT +
Preference number: 5 (lower is better)
Translates to: QCPLFHVLVLNSYKTTDSWAQQA*RHPSPY
Trigger: ATATGGGGAAGGGTGTCTCAAAGCCTGTTGAGCCCA...TGAATCTGTTGTTTTATAAGAGTTTAGGACAAGGACGTGGAACAGTGGACACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR CAA 90 bp CAGTGTCCACTGTTCCACGTCCTTGTCCTAAACTCTTATAAAACAACAGATTCACTGCCATTGATGACATaGAACACCGGGACTGGCAAG +
Preference number: 5 (lower is better)
Translates to: QCPLFHVLVLNSYKTTDSLPLMT*NTGTGK
Trigger: CTTGCCAGTCCCGGTGTTCAATGTCATCAATGGCAG...TGAATCTGTTGTTTTATAAGAGTTTAGGACAAGGACGTGGAACAGTGGACACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS GCA 90 bp CACACTCCTGTCTCTCTGGTCCCGAGTACTTTACAGAGCTCAGAATaGTTGGAGCTATTTTTCTTCTCTCAAAGCTTCTTTTTAGACACC +
Preference number: 5 (lower is better)
Translates to: HTPVSLVPSTLQSSE*LELFFFSQSFFLDT
Trigger: GGTGTCTAAAAAGAAGCTTTGAGAGAAGAAAAATAGCTCCAAGCATTCTGAGCTCTGTAAAGTACTCGGGACCAGAGAGACAGGAGTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000439430.5
CDS-3UTR CAA 90 bp GCATTCCTTGTAGCTGTTTTCTTTGAAACCGTGGGAATGGCACTGATCAGGAGAACATCCCCCATTTGCTaGCAAAATTCCTCCAGTTTT +
Preference number: 5 (lower is better)
Translates to: AFLVAVFFETVGMALIRRTSPIC*QNSSSF
Trigger: AAAACTGGAGGAATTTTGCAAGCAAATGGGGGATGT...TCTCCTGATCAGTGCCATTCCCACGGTTTCAAAGAAAACAGCTACAAGGAATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR CAA 90 bp CAGTGTCCACTGTTCCACGTCCTTGTCCTAAACTCTTATAAAACAACAGATTCAAAGATGACTTTGGAGTaGCCAGACAAGTCGGCGATG +
Preference number: 5 (lower is better)
Translates to: QCPLFHVLVLNSYKTTDSKMTLE*PDKSAM
Trigger: CATCGCCGACTTGTCTGGCAACTCCAAAGTCATCTT...TGAATCTGTTGTTTTATAAGAGTTTAGGACAAGGACGTGGAACAGTGGACACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR CAA 90 bp CAGTGTCCACTGTTCCACGTCCTTGTCCTAAACTCTTATAAAACAACAGATTCATTTTCTTTGCAGGAGTaGTCCTTGCTGATCTCTGGA +
Preference number: 5 (lower is better)
Translates to: QCPLFHVLVLNSYKTTDSFSLQE*SLLISG
Trigger: TCCAGAGATCAGCAAGGACAACTCCTGCAAAGAAAA...TGAATCTGTTGTTTTATAAGAGTTTAGGACAAGGACGTGGAACAGTGGACACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS-3UTR CAA 90 bp CAGTGTCCACTGTTCCACGTCCTTGTCCTAAACTCTTATAAAACAACAGATTCATTAATTCTCTGGAGTTaGCCATGGAAGAAGCAACAG +
Preference number: 5 (lower is better)
Translates to: QCPLFHVLVLNSYKTTDSLILWS*PWKKQQ
Trigger: CTGTTGCTTCTTCCATGGCAAACTCCAGAGAATTAA...TGAATCTGTTGTTTTATAAGAGTTTAGGACAAGGACGTGGAACAGTGGACACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334232.9
CDS-3UTR CAA 90 bp CAGTGTCCACTGTTCCACGTCCTTGTCCTAAACTCTTATAAAACAACAGATTCAGATTCACATTCCTTCTaGACCTGTGGTTGTTTCAAC +
Preference number: 5 (lower is better)
Translates to: QCPLFHVLVLNSYKTTDSDSHSF*TCGCFN
Trigger: GTTGAAACAACCACAGGTCAAGAAGGAATGTGAATC...TGAATCTGTTGTTTTATAAGAGTTTAGGACAAGGACGTGGAACAGTGGACACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS CCA 72 bp AAAGTCCTGCGGTTCCGACGCGCCTGGAGCAAACCGTaGCTCTGCGCGCCCCTGCCCTCCTCCGCCTTCCCC +
Preference number: 6 (lower is better)
Translates to: KVLRFRRAWSKP*LCAPLPSSAFP
Trigger: GGGGAAGGCGGAGGAGGGCAGGGGCGCGCAGAGCCACGGTTTGCTCCAGGCGCGTCGGAACCGCAGGACTTT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359362.6
ENST00000642595.1
CDS TCA 72 bp CCTCCGGGGCGCGGGAGGACCGTGGGACCACGGGGATaGAAAGTCCTGCGGTTCCGACGCGCCTGGAGCAAA +
Preference number: 6 (lower is better)
Translates to: PPGRGRTVGPRG*KVLRFRRAWSK
Trigger: TTTGCTCCAGGCGCGTCGGAACCGCAGGACTTTTCATCCCCGTGGTCCCACGGTCCTCCCGCGCCCCGGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359362.6
ENST00000642595.1
CDS CCA 72 bp AGCCACCGGCCCAGGGGTGCCAGCAGGCCCAGAGTGTaGCCCAGCATCTCAGCCACGATCCTCTGGAAGAGG +
Preference number: 6 (lower is better)
Translates to: SHRPRGASRPRV*PSISATILWKR
Trigger: CCTCTTCCAGAGGATCGTGGCTGAGATGCTGGGCCACACTCTGGGCCTGCTGGCACCCCTGGGCCGGTGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642595.1
CDS GCA 72 bp CACGCTCCCGCTTGGGCCACTCCTCGTCCACCCACCTaGGCAGAACCTTCTCCACGTCGGCCCTGTGGTAGA +
Preference number: 6 (lower is better)
Translates to: HAPAWATPRPPT*AEPSPRRPCGR
Trigger: TCTACCACAGGGCCGACGTGGAGAAGGTTCTGCGCAGGTGGGTGGACGAGGAGTGGCCCAAGCGGGAGCGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS GCA 72 bp GCGGGAGGACCGTGGGACCACGGGGATGAAAAGTCCTaGGGTTCCGACGCGCCTGGAGCAAACCGTGGCTCT +
Preference number: 6 (lower is better)
Translates to: AGGPWDHGDEKS*GSDAPGANRGS
Trigger: AGAGCCACGGTTTGCTCCAGGCGCGTCGGAACCGCAGGACTTTTCATCCCCGTGGTCCCACGGTCCTCCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000359362.6
ENST00000642595.1
CDS CCA 72 bp TATGATCTGCGCGCAGAGGGTCGTCCGGTGAAGCCATaGCGGCGGGTTAGGGGCAAACGAGCGTCCGAGCGG +
Preference number: 6 (lower is better)
Translates to: YDLRAEGRPVKP*RRVRGKRASER
Trigger: CCGCTCGGACGCTCGTTTGCCCCTAACCCGCCGCCATGGCTTCACCGGACGACCCTCTGCGCGCAGATCATA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359362.6
ENST00000642595.1
CDS CCA 72 bp TCTAGAAGTGCCTGGAGGGGTCTCCACGCTCCCGCTTaGGCCACTCCTCGTCCACCCACCTGCGCAGAACCT +
Preference number: 6 (lower is better)
Translates to: SRSAWRGLHAPA*ATPRPPTCAEP
Trigger: AGGTTCTGCGCAGGTGGGTGGACGAGGAGTGGCCCAAGCGGGAGCGTGGAGACCCCTCCAGGCACTTCTAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS GCA 72 bp GCAGAACCTTCTCCACGTCGGCCCTGTGGTAGAGCCTaGAGAGCTCCATCAGCTGGCCCACCGTCCTCTGAC +
Preference number: 6 (lower is better)
Translates to: AEPSPRRPCGRA*RAPSAGPPSSD
Trigger: GTCAGAGGACGGTGGGCCAGCTGATGGAGCTCTGCAGGCTCTACCACAGGGCCGACGTGGAGAAGGTTCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS TCA 72 bp AGCCTGCAGAGCTCCATCAGCTGGCCCACCGTCCTCTaGCTGTTCCGGAGCAAGAACTCCAAGGTGGGGCTC +
Preference number: 6 (lower is better)
Translates to: SLQSSISWPTVL*LFRSKNSKVGL
Trigger: GAGCCCCACCTTGGAGTTCTTGCTCCGGAACAGTCAGAGGACGGTGGGCCAGCTGATGGAGCTCTGCAGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS TCA 72 bp CTTTACCATATGATCTGCGCGCAGAGGGTCGTCCGGTaGAGCCATGGCGGCGGGTTAGGGGCAAACGAGCGT +
Preference number: 6 (lower is better)
Translates to: LYHMICAQRVVR*SHGGGLGANER
Trigger: ACGCTCGTTTGCCCCTAACCCGCCGCCATGGCTTCACCGGACGACCCTCTGCGCGCAGATCATATGGTAAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000359362.6
ENST00000642595.1
CDS CCA 72 bp GCGCCTTCCACAGAGGTTCACGTGTTGCAGCTTCATTaGGCAGCACATGGACGGCAGCTTGGAAGTAGGTCT +
Preference number: 6 (lower is better)
Translates to: APSTEVHVLQLH*AAHGRQLGSRS
Trigger: AGACCTACTTCCAAGCTGCCGTCCATGTGCTGCCCAATGAAGCTGCAACACGTGAACCTCTGTGGAAGGCGC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439430.5
CDS CAA 72 bp GAGAAAAGGTGGGCGCCTTCCACAGAGGTTCACGTGTaGCAGCTTCATTGGGCAGCACATGGACGGCAGCTT +
Preference number: 6 (lower is better)
Translates to: EKRWAPSTEVHV*QLHWAAHGRQL
Trigger: AAGCTGCCGTCCATGTGCTGCCCAATGAAGCTGCAACACGTGAACCTCTGTGGAAGGCGCCCACCTTTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439430.5
CDS CAA 90 bp ATGGTGGGGGCCCGGAGCAAGCAGGAGGAACAAGTACAGTTTTCTTaGCAGGAGTTGTCCTTGCTGATCTCTGGAAGAGGATCTCCAGTG +
Preference number: 6 (lower is better)
Translates to: MVGARSKQEEQVQFS*QELSLLISGRGSPV
Trigger: CACTGGAGATCCTCTTCCAGAGATCAGCAAGGACAACTCCTGCAAAGAAAACTGTACTTGTTCCTCCTGCTTGCTCCGGGCCCCCACCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS TCA 72 bp GGATCCAGCTTTATCCTGATCACGTCTAGTAAGTCCTaGTCATTGAGCAAGTCACTTATGGTGGGGGCCCGG +
Preference number: 6 (lower is better)
Translates to: GSSFILITSSKS*SLSKSLMVGAR
Trigger: CCGGGCCCCCACCATAAGTGACTTGCTCAATGATCAGGACTTACTAGACGTGATCAGGATAAAGCTGGATCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS CAA 72 bp GCCCGGAGCAAGCAGGAGGAACAAGTACAGTTTTCTTaGCAGGAGTTGTCCTTGCTGATCTCTGGAAGAGGA +
Preference number: 6 (lower is better)
Translates to: ARSKQEEQVQFS*QELSLLISGRG
Trigger: TCCTCTTCCAGAGATCAGCAAGGACAACTCCTGCAAAGAAAACTGTACTTGTTCCTCCTGCTTGCTCCGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS TCA 72 bp CTCGCTGGTTGTCTGGCCAGAGTCAAACCTTCTAGATaGAAGCTCTCTGGGGAATTTGTAGGTGGGAGGATA +
Preference number: 6 (lower is better)
Translates to: LAGCLARVKPSR*KLSGEFVGGRI
Trigger: TATCCTCCCACCTACAAATTCCCCAGAGAGCTTTCATCTAGAAGGTTTGACTCTGGCCAGACAACCAGCGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000334232.9
CDS TCA 72 bp TTGACCTGTGGTTGTTTCAACATCCGGAGAGGCCAATaGAGGAAGAAGAAGAGCTCTAGAAGTGCCTGGAGG +
Preference number: 6 (lower is better)
Translates to: LTCGCFNIRRGQ*RKKKSSRSAWR
Trigger: CCTCCAGGCACTTCTAGAGCTCTTCTTCTTCCTTCATTGGCCTCTCCGGATGTTGAAACAACCACAGGTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS CAA 90 bp GAGGCCCATGGCGATGTTGAGTTTGGCTTCTTAATTCTCTGGAGTTaGCCATGGAAGAAGCAACAGATTGCGAGAAGATGCTCGCTGGTT +
Preference number: 6 (lower is better)
Translates to: EAHGDVEFGFLILWS*PWKKQQIARRCSLV
Trigger: AACCAGCGAGCATCTTCTCGCAATCTGTTGCTTCTTCCATGGCAAACTCCAGAGAATTAAGAAGCCAAACTCAACATCGCCATGGGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334232.9
CDS GCA 72 bp AGTTTGCCATGGAAGAAGCAACAGATTGCGAGAAGATaGTCGCTGGTTGTCTGGCCAGAGTCAAACCTTCTA +
Preference number: 6 (lower is better)
Translates to: SLPWKKQQIARR*SLVVWPESNLL
Trigger: TAGAAGGTTTGACTCTGGCCAGACAACCAGCGAGCATCTTCTCGCAATCTGTTGCTTCTTCCATGGCAAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334232.9
CDS CCA 72 bp AAGCAACAGATTGCGAGAAGATGCTCGCTGGTTGTCTaGCCAGAGTCAAACCTTCTAGATGAAAGCTCTCTG +
Preference number: 6 (lower is better)
Translates to: KQQIARRCSLVV*PESNLLDESSL
Trigger: CAGAGAGCTTTCATCTAGAAGGTTTGACTCTGGCCAGACAACCAGCGAGCATCTTCTCGCAATCTGTTGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000334232.9
CDS GCA 72 bp CATCTCAGCCACGATCCTCTGGAAGAGGATCTCCAGTaGTATCTGGAAAGCCATTTTCTTCTCCCTGATTTT +
Preference number: 6 (lower is better)
Translates to: HLSHDPLEEDLQ*YLESHFLLPDF
Trigger: AAAATCAGGGAGAAGAAAATGGCTTTCCAGATAGCACTGGAGATCCTCTTCCAGAGGATCGTGGCTGAGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642595.1
CDS CCA 72 bp CCATTTGCTTGCAAAATTCCTCCAGTTTTTCACCGTTaGGTGACACGGATCCAGCTTTATCCTGATCACGTC +
Preference number: 6 (lower is better)
Translates to: PFACKIPPVFHR*VTRIQLYPDHV
Trigger: GACGTGATCAGGATAAAGCTGGATCCGTGTCACCCAACGGTGAAAAACTGGAGGAATTTTGCAAGCAAATGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS CAA 90 bp CCACAATTCAAACTTGAAATGGGTTCATTCAGGGATTCTTCCATTTaGATAGGGCACTCAGTGAGAGAAGGACTGGAGAAAAGGTGGGCG +
Preference number: 6 (lower is better)
Translates to: PQFKLEMGSFRDSSI*IGHSVREGLEKRWA
Trigger: CGCCCACCTTTTCTCCAGTCCTTCTCTCACTGAGTGCCCTATCAAAATGGAAGAATCCCTGAATGAACCCATTTCAAGTTTGAATTGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439430.5
CDS TCA 72 bp TTGCTTGCAAAATTCCTCCAGTTTTTCACCGTTGGGTaGCACGGATCCAGCTTTATCCTGATCACGTCTAGT +
Preference number: 6 (lower is better)
Translates to: LLAKFLQFFTVG*HGSSFILITSS
Trigger: ACTAGACGTGATCAGGATAAAGCTGGATCCGTGTCACCCAACGGTGAAAAACTGGAGGAATTTTGCAAGCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000334232.9
ENST00000359362.6
ENST00000637660.1
CDS CAA 90 bp ACTCCTGTCTCTCTGGTCCCGAGTACTTTACAGAGCTCAGAATGCTaGGAGCTATTTTTCTTCTCTCAAAGCTTCTTTTTAGACACCAGC +
Preference number: 6 (lower is better)
Translates to: TPVSLVPSTLQSSEC*ELFFFSQSFFLDTS
Trigger: GCTGGTGTCTAAAAAGAAGCTTTGAGAGAAGAAAAATAGCTCCAAGCATTCTGAGCTCTGTAAAGTACTCGGGACCAGAGAGACAGGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000439430.5
CDS CAA 72 bp AAACTTGAAATGGGTTCATTCAGGGATTCTTCCATTTaGATAGGGCACTCAGTGAGAGAAGGACTGGAGAAA +
Preference number: 6 (lower is better)
Translates to: KLEMGSFRDSSI*IGHSVREGLEK
Trigger: TTTCTCCAGTCCTTCTCTCACTGAGTGCCCTATCAAAATGGAAGAATCCCTGAATGAACCCATTTCAAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439430.5