RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EDAR (Homo sapiens)

Ensembl gene IDs: ENSG00000135960

Ensembl transcript IDs: ENST00000258443.7, ENST00000376651.1, ENST00000409271.5

Found 615 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGGCCAAAGCACCAGGAGCAGAGAACAGCCACCCCACTCTTTCGCTaGAAACATTCTGAGGAGGGTGCAAGCTGTTATCCTGGAATGGCA +
Preference number: 1 (lower is better)
Translates to: RPKHQEQRTATPLFR*KHSEEGASCYPGMA
Trigger: TGCCATTCCAGGATAACAGCTTGCACCCTCCTCAGAATGTTTTCAGCGAAAGAGTGGGGTGGCTGTTCTCTGCTCCTGGTGCTTTGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR TCA 90 bp CCAGGAGCAGAGAACAGCCACCCCACTCTTTCGCTGAAAACATTCTaGGGAGGGTGCAAGCTGTTATCCTGGAATGGCACACTCATCACA +
Preference number: 1 (lower is better)
Translates to: PGAENSHPTLSLKTF*GGCKLLSWNGTLIT
Trigger: TGTGATGAGTGTGCCATTCCAGGATAACAGCTTGCACCCTCCTCAGAATGTTTTCAGCGAAAGAGTGGGGTGGCTGTTCTCTGCTCCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR CCA 90 bp AAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCACTTTCCCTGACTaGCTCAGAAGGCTGAGTCTGAAACTCTCATGCCATGAGGCTAAT +
Preference number: 1 (lower is better)
Translates to: KPRLSFALQNSTFPD*LRRLSLKLSCHEAN
Trigger: ATTAGCCTCATGGCATGAGAGTTTCAGACTCAGCCTTCTGAGCCAGTCAGGGAAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTGGGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR CCA 90 bp TACAGGCGAGCATCTGAAAGTATCCCGGCTCTAGTCCTTTATCTTTaGTTAAATTGGAAGACAGGCCTTATTTCGTCTGGCTCCTTGAAC +
Preference number: 1 (lower is better)
Translates to: YRRASESIPALVLYL*LNWKTGLISSGSLN
Trigger: GTTCAAGGAGCCAGACGAAATAAGGCCTGTCTTCCAATTTAACCAAAGATAAAGGACTAGAGCCGGGATACTTTCAGATGCTCGCCTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR GCA 90 bp TGCAAGCTGTTATCCTGGAATGGCACACTCATCACAAGTGACATTTaGAGTCTAATTAAGGGGAGACTCACTCATCATCATCACAAGGCA +
Preference number: 1 (lower is better)
Translates to: CKLLSWNGTLITSDI*SLIKGRLTHHHHKA
Trigger: TGCCTTGTGATGATGATGAGTGAGTCTCCCCTTAATTAGACTGCAAATGTCACTTGTGATGAGTGTGCCATTCCAGGATAACAGCTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR TCA 90 bp GAACTTCTATTAACGTTTTCTAAGCGCCCCTTCATTCAGCTTGTTTaGCGTCTTCCAGTGAAGTGGTTTGTAAACATACGTTCCTTCTGT +
Preference number: 1 (lower is better)
Translates to: ELLLTFSKRPFIQLV*RLPVKWFVNIRSFC
Trigger: ACAGAAGGAACGTATGTTTACAAACCACTTCACTGGAAGACGTCAAACAAGCTGAATGAAGGGGCGCTTAGAAAACGTTAATAGAAGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR GCA 90 bp AATTGGCTACTGCACACATCCAATTGCTTGGACAAACACATGCCTTaGATATTGGTTTTGTATAGAGTGAGCTCTTCCATTATTGACTGG +
Preference number: 1 (lower is better)
Translates to: NWLLHTSNCLDKHMP*ILVLYRVSSSIIDW
Trigger: CCAGTCAATAATGGAAGAGCTCACTCTATACAAAACCAATATGCAAGGCATGTGTTTGTCCAAGCAATTGGATGTGTGCAGTAGCCAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR CCA 90 bp AGTCCTTTATCTTTGGTTAAATTGGAAGACAGGCCTTATTTCGTCTaGCTCCTTGAACATCCTAAGGCATACGGTGACATATCACAAAAG +
Preference number: 1 (lower is better)
Translates to: SPLSLVKLEDRPYFV*LLEHPKAYGDISQK
Trigger: CTTTTGTGATATGTCACCGTATGCCTTAGGATGTTCAAGGAGCCAGACGAAATAAGGCCTGTCTTCCAATTTAACCAAAGATAAAGGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR CCA 90 bp ATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCACTTTCCCTGACTGGCTCCCCTCGTTGGCTCCTTaGCTTGTCCTGGGAGGACAG +
Preference number: 2 (lower is better)
Translates to: IKPRLSFALQNSTFPDWLPSLAP*LVLGGQ
Trigger: CTGTCCTCCCAGGACAAGCCAAGGAGCCAACGAGGG...GAGCCAGTCAGGGAAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR CCA 90 bp ATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCACTTTCCCTGACTGGCTCTTAATGGTGGGCTGGTaGGCTGGCTGTATGAGTGAG +
Preference number: 2 (lower is better)
Translates to: IKPRLSFALQNSTFPDWLLMVGW*AGCMSE
Trigger: CTCACTCATACAGCCAGCCCACCAGCCCACCATTAA...GAGCCAGTCAGGGAAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR CCA 90 bp CTCGACATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCACTTTCCCTGACGAGTTAATGGTGGGCTaGTGGGCTGGCTGTATGAGT +
Preference number: 2 (lower is better)
Translates to: LDIKPRLSFALQNSTFPDELMVG*WAGCMS
Trigger: ACTCATACAGCCAGCCCACCAGCCCACCATTAACTC...GTCAGGGAAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGATGTCGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR CCA 90 bp AGAGAGGAAAAGACAAGGCCCAAGGTGGCACAACTAGAAGCCAGCTCCCTCGACTCCACTTTCCCTGACTaGCTCAGAAGGCTGAGTCTG +
Preference number: 2 (lower is better)
Translates to: REEKTRPKVAQLEASSLDSTFPD*LRRLSL
Trigger: CAGACTCAGCCTTCTGAGCCAGTCAGGGAAAGTGGA...GTCGAGGGAGCTGGCTTCTAGTTGTGCCACCTTGGGCCTTGTCTTTTCCTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR CCA 90 bp GCAGACCACAGGGTTCCCAGGCCAAAGAGTAATGCAGTAAATGAAATTGGCTACCCCTCGTTGGCTCCTTaGCTTGTCCTGGGAGGACAG +
Preference number: 2 (lower is better)
Translates to: ADHRVPRPKSNAVNEIGYPSLAP*LVLGGQ
Trigger: CTGTCCTCCCAGGACAAGCCAAGGAGCCAACGAGGG...GTAGCCAATTTCATTTACTGCATTACTCTTTGGCCTGGGAACCCTGTGGTCTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR CCA 90 bp AGAGAGGAAAAGACAAGGCCCAAGGTGGCACAACTAGAAGCCAGCTCCCTCGACTTCTTGGCAGTCTTTTaGCACCACTCACAGCTCCAG +
Preference number: 2 (lower is better)
Translates to: REEKTRPKVAQLEASSLDFLAVF*HHSQLQ
Trigger: CTGGAGCTGTGAGTGGTGCCAAAAGACTGCCAAGAA...GTCGAGGGAGCTGGCTTCTAGTTGTGCCACCTTGGGCCTTGTCTTTTCCTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR TCA 90 bp AGCAGAGAACAGCCACCCCACTCTTTCGCTGAAAACATTCTGAGGAGGGTGCAAGTACAGGCGAGCATCTaGAAGTATCCCGGCTCTAGT +
Preference number: 2 (lower is better)
Translates to: SREQPPHSFAENILRRVQVQASI*KYPGSS
Trigger: ACTAGAGCCGGGATACTTTCAGATGCTCGCCTGTAC...TTGCACCCTCCTCAGAATGTTTTCAGCGAAAGAGTGGGGTGGCTGTTCTCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR TCA 90 bp CTCGACATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCACTTTCCCTGACGGCTGGCTGTATGAGTaGGTAGATATTTACTCTGCC +
Preference number: 2 (lower is better)
Translates to: LDIKPRLSFALQNSTFPDGWLYE*VDIYSA
Trigger: GGCAGAGTAAATATCTACTCACTCATACAGCCAGCC...GTCAGGGAAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGATGTCGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR TCA 90 bp CTCGACATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCACTTTCCCTGACGGTGGGCTGGCTGTATaGGTGAGTAGATATTTACTC +
Preference number: 2 (lower is better)
Translates to: LDIKPRLSFALQNSTFPDGGLAV*VSRYLL
Trigger: GAGTAAATATCTACTCACTCATACAGCCAGCCCACC...GTCAGGGAAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGATGTCGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR GCA 90 bp AGCAGAGAACAGCCACCCCACTCTTTCGCTGAAAACATTCTGAGGAGGGTGCAAGCCCAGGCTCTCATTTaGGCTGCAGAACTCCACTTT +
Preference number: 2 (lower is better)
Translates to: SREQPPHSFAENILRRVQAQALI*AAELHF
Trigger: AAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTGGGC...TTGCACCCTCCTCAGAATGTTTTCAGCGAAAGAGTGGGGTGGCTGTTCTCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR CCA 90 bp AGCTCCCTAAAAATGGCAGGTGGAGAGCCAATGGAACATGAGCTGACACTGGCTTCCACTTTCCCTGACTaGCTCAGAAGGCTGAGTCTG +
Preference number: 2 (lower is better)
Translates to: SSLKMAGGEPMEHELTLASTFPD*LRRLSL
Trigger: CAGACTCAGCCTTCTGAGCCAGTCAGGGAAAGTGGA...AGCCAGTGTCAGCTCATGTTCCATTGGCTCTCCACCTGCCATTTTTAGGGAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR TCA 90 bp AGAGAGGAAAAGACAAGGCCCAAGGTGGCACAACTAGAAGCCAGCTCCCTCGACTTCATTCAGCTTGTTTaGCGTCTTCCAGTGAAGTGG +
Preference number: 2 (lower is better)
Translates to: REEKTRPKVAQLEASSLDFIQLV*RLPVKW
Trigger: CCACTTCACTGGAAGACGTCAAACAAGCTGAATGAA...GTCGAGGGAGCTGGCTTCTAGTTGTGCCACCTTGGGCCTTGTCTTTTCCTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR GCA 90 bp CTCGACATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCACTTTCCCTGACAGTAGATATTTACTCTaGCTGGTGAGGTACAGGCGA +
Preference number: 2 (lower is better)
Translates to: LDIKPRLSFALQNSTFPDSRYLL*LVRYRR
Trigger: TCGCCTGTACCTCACCAGGCAGAGTAAATATCTACT...GTCAGGGAAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGATGTCGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR GCA 90 bp ATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCACTTTCCCTGACTGGCTCAGTAGATATTTACTCTaGCTGGTGAGGTACAGGCGA +
Preference number: 2 (lower is better)
Translates to: IKPRLSFALQNSTFPDWLSRYLL*LVRYRR
Trigger: TCGCCTGTACCTCACCAGGCAGAGTAAATATCTACT...GAGCCAGTCAGGGAAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR CCA 90 bp CTGAGTCTGAAACTCTCATGCCATGAGGCTAATCCACAAGTCTTAGATGCTCTTCCCTCGTTGGCTCCTTaGCTTGTCCTGGGAGGACAG +
Preference number: 2 (lower is better)
Translates to: LSLKLSCHEANPQVLDALPSLAP*LVLGGQ
Trigger: CTGTCCTCCCAGGACAAGCCAAGGAGCCAACGAGGG...AAGAGCATCTAAGACTTGTGGATTAGCCTCATGGCATGAGAGTTTCAGACTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR CCA 90 bp AGGCGAGCATCTGAAAGTATCCCGGCTCTAGTCCTTTATCTTTGGTTAAATTGGCTCCAGAGCCCTCGTTaGCTCCTTGGCTTGTCCTGG +
Preference number: 2 (lower is better)
Translates to: RRASESIPALVLYLWLNWLQSPR*LLGLSW
Trigger: CCAGGACAAGCCAAGGAGCCAACGAGGGCTCTGGAG...CCAATTTAACCAAAGATAAAGGACTAGAGCCGGGATACTTTCAGATGCTCGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR CCA 90 bp CTGAGTCTGAAACTCTCATGCCATGAGGCTAATCCACAAGTCTTAGATGCTCTTCTCCAGAGCCCTCGTTaGCTCCTTGGCTTGTCCTGG +
Preference number: 2 (lower is better)
Translates to: LSLKLSCHEANPQVLDALLQSPR*LLGLSW
Trigger: CCAGGACAAGCCAAGGAGCCAACGAGGGCTCTGGAG...AAGAGCATCTAAGACTTGTGGATTAGCCTCATGGCATGAGAGTTTCAGACTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR CCA 90 bp CTCGACATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCACTTTCCCTGACAGGCCTTATTTCGTCTaGCTCCTTGAACATCCTAAG +
Preference number: 2 (lower is better)
Translates to: LDIKPRLSFALQNSTFPDRPYFV*LLEHPK
Trigger: CTTAGGATGTTCAAGGAGCCAGACGAAATAAGGCCT...GTCAGGGAAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGATGTCGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR TCA 90 bp GCAGACCACAGGGTTCCCAGGCCAAAGAGTAATGCAGTAAATGAAATTGGCTACATTTACTCTGCCTGGTaGGGTACAGGCGAGCATCTG +
Preference number: 2 (lower is better)
Translates to: ADHRVPRPKSNAVNEIGYIYSAW*GTGEHL
Trigger: CAGATGCTCGCCTGTACCTCACCAGGCAGAGTAAAT...GTAGCCAATTTCATTTACTGCATTACTCTTTGGCCTGGGAACCCTGTGGTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR CCA 90 bp GCAGACCACAGGGTTCCCAGGCCAAAGAGTAATGCAGTAAATGAAATTGGCTACTTAATGGTGGGCTGGTaGGCTGGCTGTATGAGTGAG +
Preference number: 2 (lower is better)
Translates to: ADHRVPRPKSNAVNEIGYLMVGW*AGCMSE
Trigger: CTCACTCATACAGCCAGCCCACCAGCCCACCATTAA...GTAGCCAATTTCATTTACTGCATTACTCTTTGGCCTGGGAACCCTGTGGTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR CCA 90 bp GCAGACCACAGGGTTCCCAGGCCAAAGAGTAATGCAGTAAATGAAATTGGCTACGAGTTAATGGTGGGCTaGTGGGCTGGCTGTATGAGT +
Preference number: 2 (lower is better)
Translates to: ADHRVPRPKSNAVNEIGYELMVG*WAGCMS
Trigger: ACTCATACAGCCAGCCCACCAGCCCACCATTAACTC...GTAGCCAATTTCATTTACTGCATTACTCTTTGGCCTGGGAACCCTGTGGTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR TCA 90 bp CTCGACATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCACTTTCCCTGACATATCACAAAAGCCTTaGTTCTTGGCAGTCTTTTGG +
Preference number: 2 (lower is better)
Translates to: LDIKPRLSFALQNSTFPDISQKP*FLAVFW
Trigger: CCAAAAGACTGCCAAGAATCAAGGCTTTTGTGATAT...GTCAGGGAAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGATGTCGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR GCA 90 bp CCTAAGACTGAAGTGGAAGGCCATTCACATGTAGTGCAGACCACAGGGTTCCCACTGCACACATCCAATTaGTTGGACAAACACATGCCT +
Preference number: 2 (lower is better)
Translates to: PKTEVEGHSHVVQTTGFPLHTSN*LDKHMP
Trigger: AGGCATGTGTTTGTCCAAGCAATTGGATGTGTGCAG...TGGGAACCCTGTGGTCTGCACTACATGTGAATGGCCTTCCACTTCAGTCTTAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR GCA 90 bp ATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCACTTTCCCTGACTGGCTCAATGAAATTGGCTACTaGACACATCCAATTGCTTGG +
Preference number: 2 (lower is better)
Translates to: IKPRLSFALQNSTFPDWLNEIGY*THPIAW
Trigger: CCAAGCAATTGGATGTGTGCAGTAGCCAATTTCATT...GAGCCAGTCAGGGAAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR GCA 90 bp AGCAGAGAACAGCCACCCCACTCTTTCGCTGAAAACATTCTGAGGAGGGTGCAACACCTGAACCCTACCTaGCCCAATTATAGAATCACT +
Preference number: 2 (lower is better)
Translates to: SREQPPHSFAENILRRVQHLNPT*PNYRIT
Trigger: AGTGATTCTATAATTGGGGCAGGTAGGGTTCAGGTG...TTGCACCCTCCTCAGAATGTTTTCAGCGAAAGAGTGGGGTGGCTGTTCTCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR CCA 90 bp CCATCCTTCATCATCCCAGTAGGGAGTCATCTCCCGCTTAGAACTTCTATTAACTTAATGGTGGGCTGGTaGGCTGGCTGTATGAGTGAG +
Preference number: 2 (lower is better)
Translates to: PSFIIPVGSHLPLRTSINLMVGW*AGCMSE
Trigger: CTCACTCATACAGCCAGCCCACCAGCCCACCATTAA...GTTAATAGAAGTTCTAAGCGGGAGATGACTCCCTACTGGGATGATGAAGGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR TCA 90 bp CTGAGTCTGAAACTCTCATGCCATGAGGCTAATCCACAAGTCTTAGATGCTCTTGTACAGGCGAGCATCTaGAAGTATCCCGGCTCTAGT +
Preference number: 2 (lower is better)
Translates to: LSLKLSCHEANPQVLDALVQASI*KYPGSS
Trigger: ACTAGAGCCGGGATACTTTCAGATGCTCGCCTGTAC...AAGAGCATCTAAGACTTGTGGATTAGCCTCATGGCATGAGAGTTTCAGACTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR TCA 90 bp AGCTCCCTAAAAATGGCAGGTGGAGAGCCAATGGAACATGAGCTGACACTGGCTAGAATTATGCGTGGCTaGACTCTTAGGAAGTCATCA +
Preference number: 2 (lower is better)
Translates to: SSLKMAGGEPMEHELTLARIMRG*TLRKSS
Trigger: TGATGACTTCCTAAGAGTTCAGCCACGCATAATTCT...AGCCAGTGTCAGCTCATGTTCCATTGGCTCTCCACCTGCCATTTTTAGGGAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR TCA 90 bp ATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCACTTTCCCTGACTGGCTCAGTCTTAGATGCTCTTaGAATCTAGAATTATGCGTG +
Preference number: 2 (lower is better)
Translates to: IKPRLSFALQNSTFPDWLSLRCS*NLELCV
Trigger: CACGCATAATTCTAGATTTCAAGAGCATCTAAGACT...GAGCCAGTCAGGGAAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR TCA 90 bp CTCGACATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCACTTTCCCTGACAGTCTTAGATGCTCTTaGAATCTAGAATTATGCGTG +
Preference number: 2 (lower is better)
Translates to: LDIKPRLSFALQNSTFPDSLRCS*NLELCV
Trigger: CACGCATAATTCTAGATTTCAAGAGCATCTAAGACT...GTCAGGGAAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGATGTCGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR TCA 90 bp CAAAAATGGCAGGATGGAGTCCCAGCTTTGGTCAGTGAGAATTATTATGATCTCGAACTCCACTTTCCCTaGCTGGCTCAGAAGGCTGAG +
Preference number: 2 (lower is better)
Translates to: QKWQDGVPALVSENYYDLELHFP*LAQKAE
Trigger: CTCAGCCTTCTGAGCCAGTCAGGGAAAGTGGAGTTC...GAGATCATAATAATTCTCACTGACCAAAGCTGGGACTCCATCCTGCCATTTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR TCA 90 bp AGAATTATGAATATCTCCACACAAAAATGGCAGGATGGAGTCCCAGCTTTGGTCGAACTCCACTTTCCCTaGCTGGCTCAGAAGGCTGAG +
Preference number: 2 (lower is better)
Translates to: RIMNISTQKWQDGVPALVELHFP*LAQKAE
Trigger: CTCAGCCTTCTGAGCCAGTCAGGGAAAGTGGAGTTC...GACCAAAGCTGGGACTCCATCCTGCCATTTTTGTGTGGAGATATTCATAATTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR TCA 90 bp CAAAAATGGCAGGATGGAGTCCCAGCTTTGGTCAGTGAGAATTATTATGATCTCCAGGGAGTTCAGCAGTaGACTCTAACCCCTGGTGTG +
Preference number: 2 (lower is better)
Translates to: QKWQDGVPALVSENYYDLQGVQQ*TLTPGV
Trigger: CACACCAGGGGTTAGAGTTCACTGCTGAACTCCCTG...GAGATCATAATAATTCTCACTGACCAAAGCTGGGACTCCATCCTGCCATTTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR TCA 90 bp AGCTCCCTAAAAATGGCAGGTGGAGAGCCAATGGAACATGAGCTGACACTGGCTTTCAGGACCTCATTATaGTCCTCTCACAGTATGTAC +
Preference number: 2 (lower is better)
Translates to: SSLKMAGGEPMEHELTLAFRTSL*SSHSMY
Trigger: GTACATACTGTGAGAGGATCATAATGAGGTCCTGAA...AGCCAGTGTCAGCTCATGTTCCATTGGCTCTCCACCTGCCATTTTTAGGGAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR GCA 90 bp GCAGACCACAGGGTTCCCAGGCCAAAGAGTAATGCAGTAAATGAAATTGGCTACGCTTCTTCACTAGGATaGCATCCTTCATCATCCCAG +
Preference number: 2 (lower is better)
Translates to: ADHRVPRPKSNAVNEIGYASSLG*HPSSSQ
Trigger: CTGGGATGATGAAGGATGGCATCCTAGTGAAGAAGC...GTAGCCAATTTCATTTACTGCATTACTCTTTGGCCTGGGAACCCTGTGGTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR CCA 90 bp ATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCACTTTCCCTGACTGGCTCCTAGTCCTTTATCTTTaGTTAAATTGGAAGACAGGC +
Preference number: 2 (lower is better)
Translates to: IKPRLSFALQNSTFPDWLLVLYL*LNWKTG
Trigger: GCCTGTCTTCCAATTTAACCAAAGATAAAGGACTAG...GAGCCAGTCAGGGAAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR CCA 90 bp TGTAGTGCAGACCACAGGGTTCCCAGGCCAAAGAGTAATGCAGTAAATGAAATTGAGTTAATGGTGGGCTaGTGGGCTGGCTGTATGAGT +
Preference number: 2 (lower is better)
Translates to: CSADHRVPRPKSNAVNEIELMVG*WAGCMS
Trigger: ACTCATACAGCCAGCCCACCAGCCCACCATTAACTC...AATTTCATTTACTGCATTACTCTTTGGCCTGGGAACCCTGTGGTCTGCACTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR CCA 90 bp CCTAAGACTGAAGTGGAAGGCCATTCACATGTAGTGCAGACCACAGGGTTCCCACGTCTTCCAGTGAAGTaGTTTGTAAACATACGTTCC +
Preference number: 2 (lower is better)
Translates to: PKTEVEGHSHVVQTTGFPRLPVK*FVNIRS
Trigger: GGAACGTATGTTTACAAACCACTTCACTGGAAGACG...TGGGAACCCTGTGGTCTGCACTACATGTGAATGGCCTTCCACTTCAGTCTTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR CCA 90 bp AGCAGAGAACAGCCACCCCACTCTTTCGCTGAAAACATTCTGAGGAGGGTGCAACGTCTTCCAGTGAAGTaGTTTGTAAACATACGTTCC +
Preference number: 2 (lower is better)
Translates to: SREQPPHSFAENILRRVQRLPVK*FVNIRS
Trigger: GGAACGTATGTTTACAAACCACTTCACTGGAAGACG...TTGCACCCTCCTCAGAATGTTTTCAGCGAAAGAGTGGGGTGGCTGTTCTCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR TCA 90 bp AGAATTATGAATATCTCCACACAAAAATGGCAGGATGGAGTCCCAGCTTTGGTCATTTACTCTGCCTGGTaGGGTACAGGCGAGCATCTG +
Preference number: 2 (lower is better)
Translates to: RIMNISTQKWQDGVPALVIYSAW*GTGEHL
Trigger: CAGATGCTCGCCTGTACCTCACCAGGCAGAGTAAAT...GACCAAAGCTGGGACTCCATCCTGCCATTTTTGTGTGGAGATATTCATAATTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR TCA 90 bp GCAGACCACAGGGTTCCCAGGCCAAAGAGTAATGCAGTAAATGAAATTGGCTACTTCATTCAGCTTGTTTaGCGTCTTCCAGTGAAGTGG +
Preference number: 2 (lower is better)
Translates to: ADHRVPRPKSNAVNEIGYFIQLV*RLPVKW
Trigger: CCACTTCACTGGAAGACGTCAAACAAGCTGAATGAA...GTAGCCAATTTCATTTACTGCATTACTCTTTGGCCTGGGAACCCTGTGGTCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR TCA 90 bp AGAATTATGAATATCTCCACACAAAAATGGCAGGATGGAGTCCCAGCTTTGGTCCAATGGAACATGAGCTaGCACTGGCTGGCCTTACAG +
Preference number: 2 (lower is better)
Translates to: RIMNISTQKWQDGVPALVQWNMS*HWLALQ
Trigger: CTGTAAGGCCAGCCAGTGTCAGCTCATGTTCCATTG...GACCAAAGCTGGGACTCCATCCTGCCATTTTTGTGTGGAGATATTCATAATTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR GCA 90 bp GCAGACCACAGGGTTCCCAGGCCAAAGAGTAATGCAGTAAATGAAATTGGCTACAGTAGATATTTACTCTaGCTGGTGAGGTACAGGCGA +
Preference number: 2 (lower is better)
Translates to: ADHRVPRPKSNAVNEIGYSRYLL*LVRYRR
Trigger: TCGCCTGTACCTCACCAGGCAGAGTAAATATCTACT...GTAGCCAATTTCATTTACTGCATTACTCTTTGGCCTGGGAACCCTGTGGTCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR GCA 90 bp AGCAGAGAACAGCCACCCCACTCTTTCGCTGAAAACATTCTGAGGAGGGTGCAATCAAAATGTTTGAGCTaGTTCTTCACTAGGATGCCA +
Preference number: 2 (lower is better)
Translates to: SREQPPHSFAENILRRVQSKCLS*FFTRMP
Trigger: TGGCATCCTAGTGAAGAAGCAGCTCAAACATTTTGA...TTGCACCCTCCTCAGAATGTTTTCAGCGAAAGAGTGGGGTGGCTGTTCTCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR GCA 90 bp CTCGACATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCACTTTCCCTGACGACAAACACATGCCTTaGATATTGGTTTTGTATAGA +
Preference number: 2 (lower is better)
Translates to: LDIKPRLSFALQNSTFPDDKHMP*ILVLYR
Trigger: TCTATACAAAACCAATATGCAAGGCATGTGTTTGTC...GTCAGGGAAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGATGTCGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR GCA 90 bp CCTAAGACTGAAGTGGAAGGCCATTCACATGTAGTGCAGACCACAGGGTTCCCAGCTTGGACAAACACATaGCTTGCATATTGGTTTTGT +
Preference number: 2 (lower is better)
Translates to: PKTEVEGHSHVVQTTGFPAWTNT*LAYWFC
Trigger: ACAAAACCAATATGCAAGGCATGTGTTTGTCCAAGC...TGGGAACCCTGTGGTCTGCACTACATGTGAATGGCCTTCCACTTCAGTCTTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR GCA 90 bp AGAATTATGAATATCTCCACACAAAAATGGCAGGATGGAGTCCCAGCTTTGGTCGCCCAGGCTCTCATTTaGGCTGCAGAACTCCACTTT +
Preference number: 2 (lower is better)
Translates to: RIMNISTQKWQDGVPALVAQALI*AAELHF
Trigger: AAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTGGGC...GACCAAAGCTGGGACTCCATCCTGCCATTTTTGTGTGGAGATATTCATAATTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR CCA 90 bp AGGCGAGCATCTGAAAGTATCCCGGCTCTAGTCCTTTATCTTTGGTTAAATTGGTTCTTGGCAGTCTTTTaGCACCACTCACAGCTCCAG +
Preference number: 2 (lower is better)
Translates to: RRASESIPALVLYLWLNWFLAVF*HHSQLQ
Trigger: CTGGAGCTGTGAGTGGTGCCAAAAGACTGCCAAGAA...CCAATTTAACCAAAGATAAAGGACTAGAGCCGGGATACTTTCAGATGCTCGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR CCA 90 bp TGTAGTGCAGACCACAGGGTTCCCAGGCCAAAGAGTAATGCAGTAAATGAAATTTTCTTGGCAGTCTTTTaGCACCACTCACAGCTCCAG +
Preference number: 2 (lower is better)
Translates to: CSADHRVPRPKSNAVNEIFLAVF*HHSQLQ
Trigger: CTGGAGCTGTGAGTGGTGCCAAAAGACTGCCAAGAA...AATTTCATTTACTGCATTACTCTTTGGCCTGGGAACCCTGTGGTCTGCACTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR CCA 90 bp ATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCACTTTCCCTGACTGGCTCTATCTTTGGTTAAATTaGAAGACAGGCCTTATTTCG +
Preference number: 2 (lower is better)
Translates to: IKPRLSFALQNSTFPDWLYLWLN*KTGLIS
Trigger: CGAAATAAGGCCTGTCTTCCAATTTAACCAAAGATA...GAGCCAGTCAGGGAAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR TCA 90 bp TTATCAAAATGTTTGAGCTGCTTCTTCACTAGGATGCCATCCTTCATCATCCCAATTTACTCTGCCTGGTaGGGTACAGGCGAGCATCTG +
Preference number: 2 (lower is better)
Translates to: LSKCLSCFFTRMPSFIIPIYSAW*GTGEHL
Trigger: CAGATGCTCGCCTGTACCTCACCAGGCAGAGTAAAT...TGGGATGATGAAGGATGGCATCCTAGTGAAGAAGCAGCTCAAACATTTTGATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR TCA 90 bp CCTAAGACTGAAGTGGAAGGCCATTCACATGTAGTGCAGACCACAGGGTTCCCATGGTTTTGTATAGAGTaGGCTCTTCCATTATTGACT +
Preference number: 2 (lower is better)
Translates to: PKTEVEGHSHVVQTTGFPWFCIE*ALPLLT
Trigger: AGTCAATAATGGAAGAGCTCACTCTATACAAAACCA...TGGGAACCCTGTGGTCTGCACTACATGTGAATGGCCTTCCACTTCAGTCTTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR TCA 90 bp AGCTCCCTAAAAATGGCAGGTGGAGAGCCAATGGAACATGAGCTGACACTGGCTTGGTTTTGTATAGAGTaGGCTCTTCCATTATTGACT +
Preference number: 2 (lower is better)
Translates to: SSLKMAGGEPMEHELTLAWFCIE*ALPLLT
Trigger: AGTCAATAATGGAAGAGCTCACTCTATACAAAACCA...AGCCAGTGTCAGCTCATGTTCCATTGGCTCTCCACCTGCCATTTTTAGGGAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR GCA 90 bp AGCAGAGAACAGCCACCCCACTCTTTCGCTGAAAACATTCTGAGGAGGGTGCAATCGTTGGTGGGAAATTaGTTGTTGGTGTTAAAGATA +
Preference number: 2 (lower is better)
Translates to: SREQPPHSFAENILRRVQSLVGN*LLVLKI
Trigger: TATCTTTAACACCAACAAGCAATTTCCCACCAACGA...TTGCACCCTCCTCAGAATGTTTTCAGCGAAAGAGTGGGGTGGCTGTTCTCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR CCA 90 bp CCATCCTTCATCATCCCAGTAGGGAGTCATCTCCCGCTTAGAACTTCTATTAACAGGCCTTATTTCGTCTaGCTCCTTGAACATCCTAAG +
Preference number: 2 (lower is better)
Translates to: PSFIIPVGSHLPLRTSINRPYFV*LLEHPK
Trigger: CTTAGGATGTTCAAGGAGCCAGACGAAATAAGGCCT...GTTAATAGAAGTTCTAAGCGGGAGATGACTCCCTACTGGGATGATGAAGGATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR TCA 90 bp CAAAAATGGCAGGATGGAGTCCCAGCTTTGGTCAGTGAGAATTATTATGATCTCGGTGGGCTGGCTGTATaGGTGAGTAGATATTTACTC +
Preference number: 2 (lower is better)
Translates to: QKWQDGVPALVSENYYDLGGLAV*VSRYLL
Trigger: GAGTAAATATCTACTCACTCATACAGCCAGCCCACC...GAGATCATAATAATTCTCACTGACCAAAGCTGGGACTCCATCCTGCCATTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR TCA 90 bp AGAATTATGAATATCTCCACACAAAAATGGCAGGATGGAGTCCCAGCTTTGGTCGGTGGGCTGGCTGTATaGGTGAGTAGATATTTACTC +
Preference number: 2 (lower is better)
Translates to: RIMNISTQKWQDGVPALVGGLAV*VSRYLL
Trigger: GAGTAAATATCTACTCACTCATACAGCCAGCCCACC...GACCAAAGCTGGGACTCCATCCTGCCATTTTTGTGTGGAGATATTCATAATTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR TCA 90 bp AGAATTATGAATATCTCCACACAAAAATGGCAGGATGGAGTCCCAGCTTTGGTCTCGCTGAAAACATTCTaGGGAGGGTGCAAGCTGTTA +
Preference number: 2 (lower is better)
Translates to: RIMNISTQKWQDGVPALVSLKTF*GGCKLL
Trigger: TAACAGCTTGCACCCTCCTCAGAATGTTTTCAGCGA...GACCAAAGCTGGGACTCCATCCTGCCATTTTTGTGTGGAGATATTCATAATTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR GCA 90 bp AGCAGAGAACAGCCACCCCACTCTTTCGCTGAAAACATTCTGAGGAGGGTGCAAGACAAACACATGCCTTaGATATTGGTTTTGTATAGA +
Preference number: 2 (lower is better)
Translates to: SREQPPHSFAENILRRVQDKHMP*ILVLYR
Trigger: TCTATACAAAACCAATATGCAAGGCATGTGTTTGTC...TTGCACCCTCCTCAGAATGTTTTCAGCGAAAGAGTGGGGTGGCTGTTCTCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR GCA 90 bp CTGAGTCTGAAACTCTCATGCCATGAGGCTAATCCACAAGTCTTAGATGCTCTTCTGCACACATCCAATTaGTTGGACAAACACATGCCT +
Preference number: 2 (lower is better)
Translates to: LSLKLSCHEANPQVLDALLHTSN*LDKHMP
Trigger: AGGCATGTGTTTGTCCAAGCAATTGGATGTGTGCAG...AAGAGCATCTAAGACTTGTGGATTAGCCTCATGGCATGAGAGTTTCAGACTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR TCA 90 bp CTGGAGTGCAAACTCCTTAAAGACAGGGACCAGATTCTTCACTTCTGTCATTCCATATCACAAAAGCCTTaGTTCTTGGCAGTCTTTTGG +
Preference number: 2 (lower is better)
Translates to: LECKLLKDRDQILHFCHSISQKP*FLAVFW
Trigger: CCAAAAGACTGCCAAGAATCAAGGCTTTTGTGATAT...GGAATGACAGAAGTGAAGAATCTGGTCCCTGTCTTTAAGGAGTTTGCACTCCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR TCA 90 bp TTATCAAAATGTTTGAGCTGCTTCTTCACTAGGATGCCATCCTTCATCATCCCAGGCTGGCTGTATGAGTaGGTAGATATTTACTCTGCC +
Preference number: 2 (lower is better)
Translates to: LSKCLSCFFTRMPSFIIPGWLYE*VDIYSA
Trigger: GGCAGAGTAAATATCTACTCACTCATACAGCCAGCC...TGGGATGATGAAGGATGGCATCCTAGTGAAGAAGCAGCTCAAACATTTTGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR TCA 90 bp GCAGACCACAGGGTTCCCAGGCCAAAGAGTAATGCAGTAAATGAAATTGGCTACTGGTTTTGTATAGAGTaGGCTCTTCCATTATTGACT +
Preference number: 2 (lower is better)
Translates to: ADHRVPRPKSNAVNEIGYWFCIE*ALPLLT
Trigger: AGTCAATAATGGAAGAGCTCACTCTATACAAAACCA...GTAGCCAATTTCATTTACTGCATTACTCTTTGGCCTGGGAACCCTGTGGTCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR CCA 90 bp AGGCGAGCATCTGAAAGTATCCCGGCTCTAGTCCTTTATCTTTGGTTAAATTGGAAAAGCCTTGATTCTTaGCAGTCTTTTGGCACCACT +
Preference number: 2 (lower is better)
Translates to: RRASESIPALVLYLWLNWKSLDS*QSFGTT
Trigger: AGTGGTGCCAAAAGACTGCCAAGAATCAAGGCTTTT...CCAATTTAACCAAAGATAAAGGACTAGAGCCGGGATACTTTCAGATGCTCGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR CCA 90 bp TGTAGTGCAGACCACAGGGTTCCCAGGCCAAAGAGTAATGCAGTAAATGAAATTAAAAGCCTTGATTCTTaGCAGTCTTTTGGCACCACT +
Preference number: 2 (lower is better)
Translates to: CSADHRVPRPKSNAVNEIKSLDS*QSFGTT
Trigger: AGTGGTGCCAAAAGACTGCCAAGAATCAAGGCTTTT...AATTTCATTTACTGCATTACTCTTTGGCCTGGGAACCCTGTGGTCTGCACTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR CCA 90 bp AGAATTATGAATATCTCCACACAAAAATGGCAGGATGGAGTCCCAGCTTTGGTCAGGCCTTATTTCGTCTaGCTCCTTGAACATCCTAAG +
Preference number: 2 (lower is better)
Translates to: RIMNISTQKWQDGVPALVRPYFV*LLEHPK
Trigger: CTTAGGATGTTCAAGGAGCCAGACGAAATAAGGCCT...GACCAAAGCTGGGACTCCATCCTGCCATTTTTGTGTGGAGATATTCATAATTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR CCA 90 bp CTGAGTCTGAAACTCTCATGCCATGAGGCTAATCCACAAGTCTTAGATGCTCTTACACATCCAATTGCTTaGACAAACACATGCCTTGCA +
Preference number: 2 (lower is better)
Translates to: LSLKLSCHEANPQVLDALTHPIA*TNTCLA
Trigger: TGCAAGGCATGTGTTTGTCCAAGCAATTGGATGTGT...AAGAGCATCTAAGACTTGTGGATTAGCCTCATGGCATGAGAGTTTCAGACTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR TCA 90 bp AGAATTATGAATATCTCCACACAAAAATGGCAGGATGGAGTCCCAGCTTTGGTCAGAATTATGCGTGGCTaGACTCTTAGGAAGTCATCA +
Preference number: 2 (lower is better)
Translates to: RIMNISTQKWQDGVPALVRIMRG*TLRKSS
Trigger: TGATGACTTCCTAAGAGTTCAGCCACGCATAATTCT...GACCAAAGCTGGGACTCCATCCTGCCATTTTTGTGTGGAGATATTCATAATTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR TCA 90 bp AGAATTATGAATATCTCCACACAAAAATGGCAGGATGGAGTCCCAGCTTTGGTCTTCAGGACCTCATTATaGTCCTCTCACAGTATGTAC +
Preference number: 2 (lower is better)
Translates to: RIMNISTQKWQDGVPALVFRTSL*SSHSMY
Trigger: GTACATACTGTGAGAGGATCATAATGAGGTCCTGAA...GACCAAAGCTGGGACTCCATCCTGCCATTTTTGTGTGGAGATATTCATAATTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR GCA 90 bp CAAAAATGGCAGGATGGAGTCCCAGCTTTGGTCAGTGAGAATTATTATGATCTCTGTCTTCTACTGGAGTaGAAACTCCTTAAAGACAGG +
Preference number: 2 (lower is better)
Translates to: QKWQDGVPALVSENYYDLCLLLE*KLLKDR
Trigger: CCTGTCTTTAAGGAGTTTGCACTCCAGTAGAAGACA...GAGATCATAATAATTCTCACTGACCAAAGCTGGGACTCCATCCTGCCATTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR GCA 90 bp AGAATTATGAATATCTCCACACAAAAATGGCAGGATGGAGTCCCAGCTTTGGTCTGTCTTCTACTGGAGTaGAAACTCCTTAAAGACAGG +
Preference number: 2 (lower is better)
Translates to: RIMNISTQKWQDGVPALVCLLLE*KLLKDR
Trigger: CCTGTCTTTAAGGAGTTTGCACTCCAGTAGAAGACA...GACCAAAGCTGGGACTCCATCCTGCCATTTTTGTGTGGAGATATTCATAATTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR GCA 90 bp TGTAGTGCAGACCACAGGGTTCCCAGGCCAAAGAGTAATGCAGTAAATGAAATTTCAAAATGTTTGAGCTaGTTCTTCACTAGGATGCCA +
Preference number: 2 (lower is better)
Translates to: CSADHRVPRPKSNAVNEISKCLS*FFTRMP
Trigger: TGGCATCCTAGTGAAGAAGCAGCTCAAACATTTTGA...AATTTCATTTACTGCATTACTCTTTGGCCTGGGAACCCTGTGGTCTGCACTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR GCA 90 bp CTGAGTCTGAAACTCTCATGCCATGAGGCTAATCCACAAGTCTTAGATGCTCTTTCAAAATGTTTGAGCTaGTTCTTCACTAGGATGCCA +
Preference number: 2 (lower is better)
Translates to: LSLKLSCHEANPQVLDALSKCLS*FFTRMP
Trigger: TGGCATCCTAGTGAAGAAGCAGCTCAAACATTTTGA...AAGAGCATCTAAGACTTGTGGATTAGCCTCATGGCATGAGAGTTTCAGACTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR GCA 90 bp TGTAGTGCAGACCACAGGGTTCCCAGGCCAAAGAGTAATGCAGTAAATGAAATTGCTTGGACAAACACATaGCTTGCATATTGGTTTTGT +
Preference number: 2 (lower is better)
Translates to: CSADHRVPRPKSNAVNEIAWTNT*LAYWFC
Trigger: ACAAAACCAATATGCAAGGCATGTGTTTGTCCAAGC...AATTTCATTTACTGCATTACTCTTTGGCCTGGGAACCCTGTGGTCTGCACTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR GCA 90 bp CTGAGTCTGAAACTCTCATGCCATGAGGCTAATCCACAAGTCTTAGATGCTCTTAATGAAATTGGCTACTaGACACATCCAATTGCTTGG +
Preference number: 2 (lower is better)
Translates to: LSLKLSCHEANPQVLDALNEIGY*THPIAW
Trigger: CCAAGCAATTGGATGTGTGCAGTAGCCAATTTCATT...AAGAGCATCTAAGACTTGTGGATTAGCCTCATGGCATGAGAGTTTCAGACTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR GCA 90 bp CTGAGTCTGAAACTCTCATGCCATGAGGCTAATCCACAAGTCTTAGATGCTCTTCTAAAAGGTCAAATCTaGCTAAGACTGAAGTGGAAG +
Preference number: 2 (lower is better)
Translates to: LSLKLSCHEANPQVLDALLKGQI*LRLKWK
Trigger: CTTCCACTTCAGTCTTAGGCAGATTTGACCTTTTAG...AAGAGCATCTAAGACTTGTGGATTAGCCTCATGGCATGAGAGTTTCAGACTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR CAA 90 bp TATCTTTGGTTAAATTGGAAGACAGGCCTTATTTCGTCTGGCTCCTaGAACATCCTAAGGCATACGGTGACATATCACAAAAGCCTTGAT +
Preference number: 2 (lower is better)
Translates to: YLWLNWKTGLISSGS*NILRHTVTYHKSLD
Trigger: ATCAAGGCTTTTGTGATATGTCACCGTATGCCTTAGGATGTTCAAGGAGCCAGACGAAATAAGGCCTGTCTTCCAATTTAACCAAAGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR TCA 90 bp AGAATTATGAATATCTCCACACAAAAATGGCAGGATGGAGTCCCAGCTTTGGTCATATCACAAAAGCCTTaGTTCTTGGCAGTCTTTTGG +
Preference number: 2 (lower is better)
Translates to: RIMNISTQKWQDGVPALVISQKP*FLAVFW
Trigger: CCAAAAGACTGCCAAGAATCAAGGCTTTTGTGATAT...GACCAAAGCTGGGACTCCATCCTGCCATTTTTGTGTGGAGATATTCATAATTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR GCA 90 bp AGAATTATGAATATCTCCACACAAAAATGGCAGGATGGAGTCCCAGCTTTGGTCAATGAAATTGGCTACTaGACACATCCAATTGCTTGG +
Preference number: 2 (lower is better)
Translates to: RIMNISTQKWQDGVPALVNEIGY*THPIAW
Trigger: CCAAGCAATTGGATGTGTGCAGTAGCCAATTTCATT...GACCAAAGCTGGGACTCCATCCTGCCATTTTTGTGTGGAGATATTCATAATTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR GCA 90 bp AGAATTATGAATATCTCCACACAAAAATGGCAGGATGGAGTCCCAGCTTTGGTCCTAAAAGGTCAAATCTaGCTAAGACTGAAGTGGAAG +
Preference number: 2 (lower is better)
Translates to: RIMNISTQKWQDGVPALVLKGQI*LRLKWK
Trigger: CTTCCACTTCAGTCTTAGGCAGATTTGACCTTTTAG...GACCAAAGCTGGGACTCCATCCTGCCATTTTTGTGTGGAGATATTCATAATTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR CCA 90 bp TGTAGTGCAGACCACAGGGTTCCCAGGCCAAAGAGTAATGCAGTAAATGAAATTCTAGTCCTTTATCTTTaGTTAAATTGGAAGACAGGC +
Preference number: 2 (lower is better)
Translates to: CSADHRVPRPKSNAVNEILVLYL*LNWKTG
Trigger: GCCTGTCTTCCAATTTAACCAAAGATAAAGGACTAG...AATTTCATTTACTGCATTACTCTTTGGCCTGGGAACCCTGTGGTCTGCACTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR CCA 90 bp TTATCAAAATGTTTGAGCTGCTTCTTCACTAGGATGCCATCCTTCATCATCCCACGTCTTCCAGTGAAGTaGTTTGTAAACATACGTTCC +
Preference number: 2 (lower is better)
Translates to: LSKCLSCFFTRMPSFIIPRLPVK*FVNIRS
Trigger: GGAACGTATGTTTACAAACCACTTCACTGGAAGACG...TGGGATGATGAAGGATGGCATCCTAGTGAAGAAGCAGCTCAAACATTTTGATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR CAA 90 bp AGAGGAATTAAAAGGATAATTAAGCTCTGCCGTGGAGTATTTAGCTaGCAGGGTAAACCAAATAGGTTCGAAAAACAGCAGCAAACAGAC +
Preference number: 2 (lower is better)
Translates to: RGIKRIIKLCRGVFS*QGKPNRFEKQQQTD
Trigger: GTCTGTTTGCTGCTGTTTTTCGAACCTATTTGGTTTACCCTGCAAGCTAAATACTCCACGGCAGAGCTTAATTATCCTTTTAATTCCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR GCA 90 bp TGTAGTGCAGACCACAGGGTTCCCAGGCCAAAGAGTAATGCAGTAAATGAAATTGACAAACACATGCCTTaGATATTGGTTTTGTATAGA +
Preference number: 2 (lower is better)
Translates to: CSADHRVPRPKSNAVNEIDKHMP*ILVLYR
Trigger: TCTATACAAAACCAATATGCAAGGCATGTGTTTGTC...AATTTCATTTACTGCATTACTCTTTGGCCTGGGAACCCTGTGGTCTGCACTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR GCA 90 bp CCAATTATAGAATCACTAACTAACATCTCATTGGCAGACGAGAAACTGAGGCAGGCTTGGACAAACACATaGCTTGCATATTGGTTTTGT +
Preference number: 2 (lower is better)
Translates to: PIIESLTNISLADEKLRQAWTNT*LAYWFC
Trigger: ACAAAACCAATATGCAAGGCATGTGTTTGTCCAAGC...CTGCCTCAGTTTCTCGTCTGCCAATGAGATGTTAGTTAGTGATTCTATAATTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR GCA 90 bp CAAAAATGGCAGGATGGAGTCCCAGCTTTGGTCAGTGAGAATTATTATGATCTCATCACAAGTGACATTTaGAGTCTAATTAAGGGGAGA +
Preference number: 2 (lower is better)
Translates to: QKWQDGVPALVSENYYDLITSDI*SLIKGR
Trigger: TCTCCCCTTAATTAGACTGCAAATGTCACTTGTGAT...GAGATCATAATAATTCTCACTGACCAAAGCTGGGACTCCATCCTGCCATTTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR CAA 90 bp CATTATGATCCTCTCACAGTATGTACTACATTCGTTGGTGGGAAATaGCTTGTTGGTGTTAAAGATATGACTGATTTTCCCCCTAAAGCA +
Preference number: 2 (lower is better)
Translates to: HYDPLTVCTTFVGGK*LVGVKDMTDFPPKA
Trigger: TGCTTTAGGGGGAAAATCAGTCATATCTTTAACACCAACAAGCAATTTCCCACCAACGAATGTAGTACATACTGTGAGAGGATCATAATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR CCA 90 bp AGAATTATGAATATCTCCACACAAAAATGGCAGGATGGAGTCCCAGCTTTGGTCTATCTTTGGTTAAATTaGAAGACAGGCCTTATTTCG +
Preference number: 2 (lower is better)
Translates to: RIMNISTQKWQDGVPALVYLWLN*KTGLIS
Trigger: CGAAATAAGGCCTGTCTTCCAATTTAACCAAAGATA...GACCAAAGCTGGGACTCCATCCTGCCATTTTTGTGTGGAGATATTCATAATTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR CCA 90 bp CCAATTATAGAATCACTAACTAACATCTCATTGGCAGACGAGAAACTGAGGCAGCTAGTCCTTTATCTTTaGTTAAATTGGAAGACAGGC +
Preference number: 2 (lower is better)
Translates to: PIIESLTNISLADEKLRQLVLYL*LNWKTG
Trigger: GCCTGTCTTCCAATTTAACCAAAGATAAAGGACTAG...CTGCCTCAGTTTCTCGTCTGCCAATGAGATGTTAGTTAGTGATTCTATAATTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR CCA 90 bp AGAATTATGAATATCTCCACACAAAAATGGCAGGATGGAGTCCCAGCTTTGGTCTTATTCCCATTTAAATaGACAAACCACACTGTGTTG +
Preference number: 2 (lower is better)
Translates to: RIMNISTQKWQDGVPALVLFPFK*TNHTVL
Trigger: CAACACAGTGTGGTTTGTCCATTTAAATGGGAATAA...GACCAAAGCTGGGACTCCATCCTGCCATTTTTGTGTGGAGATATTCATAATTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR CAA 90 bp ATTATGAATATCTCCACACAAAAATGGCAGGATGGAGTCCCAGCTTaGGTCAGTGAGAATTATTATGATCTCATTGTTCTGAATCCCATA +
Preference number: 2 (lower is better)
Translates to: IMNISTQKWQDGVPA*VSENYYDLIVLNPI
Trigger: TATGGGATTCAGAACAATGAGATCATAATAATTCTCACTGACCAAAGCTGGGACTCCATCCTGCCATTTTTGTGTGGAGATATTCATAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR CAA 90 bp CTCGACATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCACTTTCCCTGACCGTTGGCTCCTTGGCTaGTCCTGGGAGGACAGCCCA +
Preference number: 3 (lower is better)
Translates to: LDIKPRLSFALQNSTFPDRWLLG*SWEDSP
Trigger: TGGGCTGTCCTCCCAGGACAAGCCAAGGAGCCAACG...GTCAGGGAAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGATGTCGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR CAA 90 bp AGAGAGGAAAAGACAAGGCCCAAGGTGGCACAACTAGAAGCCAGCTCCCTCGACGCCCTCGTTGGCTCCTaGGCTTGTCCTGGGAGGACA +
Preference number: 3 (lower is better)
Translates to: REEKTRPKVAQLEASSLDALVGS*ACPGRT
Trigger: TGTCCTCCCAGGACAAGCCAAGGAGCCAACGAGGGC...GTCGAGGGAGCTGGCTTCTAGTTGTGCCACCTTGGGCCTTGTCTTTTCCTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR GCA 72 bp GCTCCCTCGACATCAAGCCCAGGCTCTCATTTGCGCTaGAGAACTCCACTTTCCCTGACTGGCTCAGAAGGC +
Preference number: 3 (lower is better)
Translates to: APSTSSPGSHLR*RTPLSLTGSEG
Trigger: GCCTTCTGAGCCAGTCAGGGAAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGATGTCGAGGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR CAA 90 bp AGCTCCCTAAAAATGGCAGGTGGAGAGCCAATGGAACATGAGCTGACACTGGCTCGTTGGCTCCTTGGCTaGTCCTGGGAGGACAGCCCA +
Preference number: 3 (lower is better)
Translates to: SSLKMAGGEPMEHELTLARWLLG*SWEDSP
Trigger: TGGGCTGTCCTCCCAGGACAAGCCAAGGAGCCAACG...AGCCAGTGTCAGCTCATGTTCCATTGGCTCTCCACCTGCCATTTTTAGGGAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR CAA 90 bp GCAGACCACAGGGTTCCCAGGCCAAAGAGTAATGCAGTAAATGAAATTGGCTACGCTCCAGAGCCCTCGTaGGCTCCTTGGCTTGTCCTG +
Preference number: 3 (lower is better)
Translates to: ADHRVPRPKSNAVNEIGYAPEPS*APWLVL
Trigger: CAGGACAAGCCAAGGAGCCAACGAGGGCTCTGGAGC...GTAGCCAATTTCATTTACTGCATTACTCTTTGGCCTGGGAACCCTGTGGTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR CAA 90 bp AGAAGCCAGCTCCCTCGACATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCACACATCCAATTGCTaGGACAAACACATGCCTTGC +
Preference number: 3 (lower is better)
Translates to: RSQLPRHQAQALICAAELHTSNC*DKHMPC
Trigger: GCAAGGCATGTGTTTGTCCAAGCAATTGGATGTGTG...GAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGATGTCGAGGGAGCTGGCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR TCA 72 bp CAGGCTCTCATTTGCGCTGCAGAACTCCACTTTCCCTaGCTGGCTCAGAAGGCTGAGTCTGAAACTCTCATG +
Preference number: 3 (lower is better)
Translates to: QALICAAELHFP*LAQKAESETLM
Trigger: CATGAGAGTTTCAGACTCAGCCTTCTGAGCCAGTCAGGGAAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR TCA 72 bp CTCCCTAAAAATGGCAGGTGGAGAGCCAATGGAACATaGGCTGACACTGGCTGGCCTTACAGCCCCAGAATT +
Preference number: 3 (lower is better)
Translates to: LPKNGRWRANGT*ADTGWPYSPRI
Trigger: AATTCTGGGGCTGTAAGGCCAGCCAGTGTCAGCTCATGTTCCATTGGCTCTCCACCTGCCATTTTTAGGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR CAA 90 bp TGTAGTGCAGACCACAGGGTTCCCAGGCCAAAGAGTAATGCAGTAAATGAAATTCGTTGGCTCCTTGGCTaGTCCTGGGAGGACAGCCCA +
Preference number: 3 (lower is better)
Translates to: CSADHRVPRPKSNAVNEIRWLLG*SWEDSP
Trigger: TGGGCTGTCCTCCCAGGACAAGCCAAGGAGCCAACG...AATTTCATTTACTGCATTACTCTTTGGCCTGGGAACCCTGTGGTCTGCACTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR CAA 90 bp AGGCGAGCATCTGAAAGTATCCCGGCTCTAGTCCTTTATCTTTGGTTAAATTGGGCCCTCGTTGGCTCCTaGGCTTGTCCTGGGAGGACA +
Preference number: 3 (lower is better)
Translates to: RRASESIPALVLYLWLNWALVGS*ACPGRT
Trigger: TGTCCTCCCAGGACAAGCCAAGGAGCCAACGAGGGC...CCAATTTAACCAAAGATAAAGGACTAGAGCCGGGATACTTTCAGATGCTCGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR CAA 90 bp TGTAGTGCAGACCACAGGGTTCCCAGGCCAAAGAGTAATGCAGTAAATGAAATTGCTCCAGAGCCCTCGTaGGCTCCTTGGCTTGTCCTG +
Preference number: 3 (lower is better)
Translates to: CSADHRVPRPKSNAVNEIAPEPS*APWLVL
Trigger: CAGGACAAGCCAAGGAGCCAACGAGGGCTCTGGAGC...AATTTCATTTACTGCATTACTCTTTGGCCTGGGAACCCTGTGGTCTGCACTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR CAA 90 bp ATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCACTTTCCCTGACTGGCTCCACACATCCAATTGCTaGGACAAACACATGCCTTGC +
Preference number: 3 (lower is better)
Translates to: IKPRLSFALQNSTFPDWLHTSNC*DKHMPC
Trigger: GCAAGGCATGTGTTTGTCCAAGCAATTGGATGTGTG...GAGCCAGTCAGGGAAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR CAA 90 bp AGCAGAGAACAGCCACCCCACTCTTTCGCTGAAAACATTCTGAGGAGGGTGCAACTGTGTCCTTCAGCATaGCTGCCCCTAAAAGGTCAA +
Preference number: 3 (lower is better)
Translates to: SREQPPHSFAENILRRVQLCPSA*LPLKGQ
Trigger: TTGACCTTTTAGGGGCAGCAATGCTGAAGGACACAG...TTGCACCCTCCTCAGAATGTTTTCAGCGAAAGAGTGGGGTGGCTGTTCTCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR TCA 72 bp GAGAACAGCCACCCCACTCTTTCGCTGAAAACATTCTaGGGAGGGTGCAAGCTGTTATCCTGGAATGGCACA +
Preference number: 3 (lower is better)
Translates to: ENSHPTLSLKTF*GGCKLLSWNGT
Trigger: TGTGCCATTCCAGGATAACAGCTTGCACCCTCCTCAGAATGTTTTCAGCGAAAGAGTGGGGTGGCTGTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR CAA 90 bp CCAATTATAGAATCACTAACTAACATCTCATTGGCAGACGAGAAACTGAGGCAGGCTCCAGAGCCCTCGTaGGCTCCTTGGCTTGTCCTG +
Preference number: 3 (lower is better)
Translates to: PIIESLTNISLADEKLRQAPEPS*APWLVL
Trigger: CAGGACAAGCCAAGGAGCCAACGAGGGCTCTGGAGC...CTGCCTCAGTTTCTCGTCTGCCAATGAGATGTTAGTTAGTGATTCTATAATTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR CAA 90 bp AGAGAGGAAAAGACAAGGCCCAAGGTGGCACAACTAGAAGCCAGCTCCCTCGACCCTTGCATATTGGTTTaGTATAGAGTGAGCTCTTCC +
Preference number: 3 (lower is better)
Translates to: REEKTRPKVAQLEASSLDPCILV*YRVSSS
Trigger: GGAAGAGCTCACTCTATACAAAACCAATATGCAAGG...GTCGAGGGAGCTGGCTTCTAGTTGTGCCACCTTGGGCCTTGTCTTTTCCTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR CAA 90 bp AGCAGAGAACAGCCACCCCACTCTTTCGCTGAAAACATTCTGAGGAGGGTGCAAACTGCACACATCCAATaGCTTGGACAAACACATGCC +
Preference number: 3 (lower is better)
Translates to: SREQPPHSFAENILRRVQTAHIQ*LGQTHA
Trigger: GGCATGTGTTTGTCCAAGCAATTGGATGTGTGCAGT...TTGCACCCTCCTCAGAATGTTTTCAGCGAAAGAGTGGGGTGGCTGTTCTCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR GCA 72 bp CCTGACTGGCTCAGAAGGCTGAGTCTGAAACTCTCATaGCATGAGGCTAATCCACAAGTCTTAGATGCTCTT +
Preference number: 3 (lower is better)
Translates to: PDWLRRLSLKLS*HEANPQVLDAL
Trigger: AAGAGCATCTAAGACTTGTGGATTAGCCTCATGGCATGAGAGTTTCAGACTCAGCCTTCTGAGCCAGTCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR CAA 90 bp GCAGACCACAGGGTTCCCAGGCCAAAGAGTAATGCAGTAAATGAAATTGGCTACATTTCGTCTGGCTCCTaGAACATCCTAAGGCATACG +
Preference number: 3 (lower is better)
Translates to: ADHRVPRPKSNAVNEIGYISSGS*NILRHT
Trigger: CGTATGCCTTAGGATGTTCAAGGAGCCAGACGAAAT...GTAGCCAATTTCATTTACTGCATTACTCTTTGGCCTGGGAACCCTGTGGTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR CAA 90 bp CTCGACATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCACTTTCCCTGACTCTAGTCCTTTATCTTaGGTTAAATTGGAAGACAGG +
Preference number: 3 (lower is better)
Translates to: LDIKPRLSFALQNSTFPDSSPLS*VKLEDR
Trigger: CCTGTCTTCCAATTTAACCAAAGATAAAGGACTAGA...GTCAGGGAAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGATGTCGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR CAA 90 bp GCAGACCACAGGGTTCCCAGGCCAAAGAGTAATGCAGTAAATGAAATTGGCTACCTTCATTCAGCTTGTTaGACGTCTTCCAGTGAAGTG +
Preference number: 3 (lower is better)
Translates to: ADHRVPRPKSNAVNEIGYLHSAC*TSSSEV
Trigger: CACTTCACTGGAAGACGTCAAACAAGCTGAATGAAG...GTAGCCAATTTCATTTACTGCATTACTCTTTGGCCTGGGAACCCTGTGGTCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR CAA 90 bp CTGAGTCTGAAACTCTCATGCCATGAGGCTAATCCACAAGTCTTAGATGCTCTTATTTCGTCTGGCTCCTaGAACATCCTAAGGCATACG +
Preference number: 3 (lower is better)
Translates to: LSLKLSCHEANPQVLDALISSGS*NILRHT
Trigger: CGTATGCCTTAGGATGTTCAAGGAGCCAGACGAAAT...AAGAGCATCTAAGACTTGTGGATTAGCCTCATGGCATGAGAGTTTCAGACTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR CAA 90 bp AGGCGAGCATCTGAAAGTATCCCGGCTCTAGTCCTTTATCTTTGGTTAAATTGGATTTCGTCTGGCTCCTaGAACATCCTAAGGCATACG +
Preference number: 3 (lower is better)
Translates to: RRASESIPALVLYLWLNWISSGS*NILRHT
Trigger: CGTATGCCTTAGGATGTTCAAGGAGCCAGACGAAAT...CCAATTTAACCAAAGATAAAGGACTAGAGCCGGGATACTTTCAGATGCTCGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR CAA 90 bp CCATCCTTCATCATCCCAGTAGGGAGTCATCTCCCGCTTAGAACTTCTATTAACCTTCATTCAGCTTGTTaGACGTCTTCCAGTGAAGTG +
Preference number: 3 (lower is better)
Translates to: PSFIIPVGSHLPLRTSINLHSAC*TSSSEV
Trigger: CACTTCACTGGAAGACGTCAAACAAGCTGAATGAAG...GTTAATAGAAGTTCTAAGCGGGAGATGACTCCCTACTGGGATGATGAAGGATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR CAA 90 bp AGCTCCCTAAAAATGGCAGGTGGAGAGCCAATGGAACATGAGCTGACACTGGCTCAGGGTGTCTGCATTTaGTTGCCATTTTATCAAAAT +
Preference number: 3 (lower is better)
Translates to: SSLKMAGGEPMEHELTLAQGVCI*LPFYQN
Trigger: ATTTTGATAAAATGGCAACAAAATGCAGACACCCTG...AGCCAGTGTCAGCTCATGTTCCATTGGCTCTCCACCTGCCATTTTTAGGGAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR TCA 72 bp ATATTTACTCTGCCTGGTGAGGTACAGGCGAGCATCTaGAAGTATCCCGGCTCTAGTCCTTTATCTTTGGTT +
Preference number: 3 (lower is better)
Translates to: IFTLPGEVQASI*KYPGSSPLSLV
Trigger: AACCAAAGATAAAGGACTAGAGCCGGGATACTTTCAGATGCTCGCCTGTACCTCACCAGGCAGAGTAAATAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR TCA 72 bp ATTCATTTGAGTCCTCAACATTGTCTCATTGTTCAGTaGGTTAATGGTGGGCTGGTGGGCTGGCTGTATGAG +
Preference number: 3 (lower is better)
Translates to: IHLSPQHCLIVQ*VNGGLVGWLYE
Trigger: CTCATACAGCCAGCCCACCAGCCCACCATTAACTCACTGAACAATGAGACAATGTTGAGGACTCAAATGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR CAA 90 bp CAAAAATGGCAGGATGGAGTCCCAGCTTTGGTCAGTGAGAATTATTATGATCTCCACACATCCAATTGCTaGGACAAACACATGCCTTGC +
Preference number: 3 (lower is better)
Translates to: QKWQDGVPALVSENYYDLHTSNC*DKHMPC
Trigger: GCAAGGCATGTGTTTGTCCAAGCAATTGGATGTGTG...GAGATCATAATAATTCTCACTGACCAAAGCTGGGACTCCATCCTGCCATTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR CAA 90 bp TGTAGTGCAGACCACAGGGTTCCCAGGCCAAAGAGTAATGCAGTAAATGAAATTCACATGCCTTGCATATaGGTTTTGTATAGAGTGAGC +
Preference number: 3 (lower is better)
Translates to: CSADHRVPRPKSNAVNEIHMPCI*VLYRVS
Trigger: GCTCACTCTATACAAAACCAATATGCAAGGCATGTG...AATTTCATTTACTGCATTACTCTTTGGCCTGGGAACCCTGTGGTCTGCACTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR CAA 90 bp CCAATTATAGAATCACTAACTAACATCTCATTGGCAGACGAGAAACTGAGGCAGCTTCATTCAGCTTGTTaGACGTCTTCCAGTGAAGTG +
Preference number: 3 (lower is better)
Translates to: PIIESLTNISLADEKLRQLHSAC*TSSSEV
Trigger: CACTTCACTGGAAGACGTCAAACAAGCTGAATGAAG...CTGCCTCAGTTTCTCGTCTGCCAATGAGATGTTAGTTAGTGATTCTATAATTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR CAA 90 bp AGAATTATGAATATCTCCACACAAAAATGGCAGGATGGAGTCCCAGCTTTGGTCCCTTGCATATTGGTTTaGTATAGAGTGAGCTCTTCC +
Preference number: 3 (lower is better)
Translates to: RIMNISTQKWQDGVPALVPCILV*YRVSSS
Trigger: GGAAGAGCTCACTCTATACAAAACCAATATGCAAGG...GACCAAAGCTGGGACTCCATCCTGCCATTTTTGTGTGGAGATATTCATAATTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR GCA 72 bp CTGCACACATCCAATTGCTTGGACAAACACATGCCTTaGATATTGGTTTTGTATAGAGTGAGCTCTTCCATT +
Preference number: 3 (lower is better)
Translates to: LHTSNCLDKHMP*ILVLYRVSSSI
Trigger: AATGGAAGAGCTCACTCTATACAAAACCAATATGCAAGGCATGTGTTTGTCCAAGCAATTGGATGTGTGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR GCA 72 bp TTATCCTGGAATGGCACACTCATCACAAGTGACATTTaGAGTCTAATTAAGGGGAGACTCACTCATCATCAT +
Preference number: 3 (lower is better)
Translates to: LSWNGTLITSDI*SLIKGRLTHHH
Trigger: ATGATGATGAGTGAGTCTCCCCTTAATTAGACTGCAAATGTCACTTGTGATGAGTGTGCCATTCCAGGATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR CAA 90 bp AGAATTATGAATATCTCCACACAAAAATGGCAGGATGGAGTCCCAGCTTTGGTCTCTAGTCCTTTATCTTaGGTTAAATTGGAAGACAGG +
Preference number: 3 (lower is better)
Translates to: RIMNISTQKWQDGVPALVSSPLS*VKLEDR
Trigger: CCTGTCTTCCAATTTAACCAAAGATAAAGGACTAGA...GACCAAAGCTGGGACTCCATCCTGCCATTTTTGTGTGGAGATATTCATAATTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR-3UTR CAA 90 bp CAAAAATGGCAGGATGGAGTCCCAGCTTTGGTCAGTGAGAATTATTATGATCTCCAGGGTGTCTGCATTTaGTTGCCATTTTATCAAAAT +
Preference number: 3 (lower is better)
Translates to: QKWQDGVPALVSENYYDLQGVCI*LPFYQN
Trigger: ATTTTGATAAAATGGCAACAAAATGCAGACACCCTG...GAGATCATAATAATTCTCACTGACCAAAGCTGGGACTCCATCCTGCCATTTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR CCA 72 bp AAGTATTGCAGAATTATGAATATCTCCACACAAAAATaGCAGGATGGAGTCCCAGCTTTGGTCAGTGAGAAT +
Preference number: 3 (lower is better)
Translates to: KYCRIMNISTQK*QDGVPALVSEN
Trigger: ATTCTCACTGACCAAAGCTGGGACTCCATCCTGCCATTTTTGTGTGGAGATATTCATAATTCTGCAATACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp ATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCACTTTCCCTGACTGGCTCCAGGGCACCGGCGCATaGGGGCCGTCACCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: IKPRLSFALQNSTFPDWLQGTGA*GPSPGA
Trigger: TGCCCCAGGTGACGGCCCCCATGCGCCGGTGCCCTG...GAGCCAGTCAGGGAAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp ATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCACTTTCCCTGACTGGCTCAGGGGCCAGCAGGGCTaGCTGGGACCTGGCACACCT +
Preference number: 4 (lower is better)
Translates to: IKPRLSFALQNSTFPDWLRGQQG*LGPGTP
Trigger: AGGTGTGCCAGGTCCCAGGCAGCCCTGCTGGCCCCT...GAGCCAGTCAGGGAAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp CTCGACATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCACTTTCCCTGACAGGGGCCAGCAGGGCTaGCTGGGACCTGGCACACCT +
Preference number: 4 (lower is better)
Translates to: LDIKPRLSFALQNSTFPDRGQQG*LGPGTP
Trigger: AGGTGTGCCAGGTCCCAGGCAGCCCTGCTGGCCCCT...GTCAGGGAAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGATGTCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp AGAAGCCAGCTCCCTCGACATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCTCTTCCCCGGGTGGCTaGTGCAACAGGCTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: RSQLPRHQAQALICAAELSSPGG*CNRLGQ
Trigger: CTGCCCCAGCCTGTTGCACCAGCCACCCGGGGAAGA...GAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGATGTCGAGGGAGCTGGCTTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258443.7
CDS-3UTR GCA 90 bp AGAGAGGAAAAGACAAGGCCCAAGGTGGCACAACTAGAAGCCAGCTCCCTCGACGGCCTGCAGAGGGCTTaGTGCTCCTCTCAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: REEKTRPKVAQLEASSLDGLQRA*CSSQAG
Trigger: GCCAGCCTGAGAGGAGCAGCAAGCCCTCTGCAGGCC...GTCGAGGGAGCTGGCTTCTAGTTGTGCCACCTTGGGCCTTGTCTTTTCCTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409271.5
CDS-3UTR CCA 90 bp AGAAGCCAGCTCCCTCGACATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCGACAGGCTTCACAGGTaGCCACCGTGGCAGCCCTCT +
Preference number: 4 (lower is better)
Translates to: RSQLPRHQAQALICAAELDRLHR*PPWQPS
Trigger: AGAGGGCTGCCACGGTGGCCACCTGTGAAGCCTGTC...GAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGATGTCGAGGGAGCTGGCTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR TCA 90 bp AGAAGCCAGCTCCCTCGACATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCTCCGACAGGGGGAGTTaGCGGAGAGTCCAGGAAGCA +
Preference number: 4 (lower is better)
Translates to: RSQLPRHQAQALICAAELSDRGS*RRVQEA
Trigger: TGCTTCCTGGACTCTCCGTCAACTCCCCCTGTCGGA...GAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGATGTCGAGGGAGCTGGCTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp AGCAGAGAACAGCCACCCCACTCTTTCGCTGAAAACATTCTGAGGAGGGTGCAAGGGAGCCAGGGCGTCTaGGTGCAGTCCCCCACATGG +
Preference number: 4 (lower is better)
Translates to: SREQPPHSFAENILRRVQGSQGV*VQSPTW
Trigger: CCATGTGGGGGACTGCACGCAGACGCCCTGGCTCCC...TTGCACCCTCCTCAGAATGTTTTCAGCGAAAGAGTGGGGTGGCTGTTCTCTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp AGAGAGGAAAAGACAAGGCCCAAGGTGGCACAACTAGAAGCCAGCTCCCTCGACGACAGGCTTCACAGGTaGCCACCGTGGCAGCCCTCT +
Preference number: 4 (lower is better)
Translates to: REEKTRPKVAQLEASSLDDRLHR*PPWQPS
Trigger: AGAGGGCTGCCACGGTGGCCACCTGTGAAGCCTGTC...GTCGAGGGAGCTGGCTTCTAGTTGTGCCACCTTGGGCCTTGTCTTTTCCTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp AGAAGCCAGCTCCCTCGACATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCTCGTCCTTGCTCACTTaGGCCTCCACGCTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: RSQLPRHQAQALICAAELSSLLT*ASTLFP
Trigger: GGGGAAGAGCGTGGAGGCCCAAGTGAGCAAGGACGA...GAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGATGTCGAGGGAGCTGGCTTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp AGAAGCCAGCTCCCTCGACATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCTCCAGAGCCCTCGTTaGCTCCTTGGCTTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: RSQLPRHQAQALICAAELLQSPR*LLGLSW
Trigger: CCAGGACAAGCCAAGGAGCCAACGAGGGCTCTGGAG...GAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGATGTCGAGGGAGCTGGCTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp ATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCACTTTCCCTGACTGGCTCCACATTCCTTGGTGTTaGGGGGTGCCAGGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: IKPRLSFALQNSTFPDWLHIPWC*GVPGGR
Trigger: CCTGCCTCCTGGCACCCCCCAACACCAAGGAATGTG...GAGCCAGTCAGGGAAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp AGAGAGGAAAAGACAAGGCCCAAGGTGGCACAACTAGAAGCCAGCTCCCTCGACCAGAAGGTGCCCACATaGGTGGTGGAGGCTGAGCCT +
Preference number: 4 (lower is better)
Translates to: REEKTRPKVAQLEASSLDQKVPT*VVEAEP
Trigger: AGGCTCAGCCTCCACCACCCATGTGGGCACCTTCTG...GTCGAGGGAGCTGGCTTCTAGTTGTGCCACCTTGGGCCTTGTCTTTTCCTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000409271.5
CDS-3UTR TCA 90 bp CCTAAGACTGAAGTGGAAGGCCATTCACATGTAGTGCAGACCACAGGGTTCCCACCGGGAACTCTTCCTTaGCCGCTCCCTGCCCTGTCT +
Preference number: 4 (lower is better)
Translates to: PKTEVEGHSHVVQTTGFPPGTLP*PLPALS
Trigger: AGACAGGGCAGGGAGCGGTCAAGGAAGAGTTCCCGG...TGGGAACCCTGTGGTCTGCACTACATGTGAATGGCCTTCCACTTCAGTCTTAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR TCA 90 bp ATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCACTTTCCCTGACTGGCTCGTATTCCGCTCGGGCTaGGCACATCAGAGACACCAC +
Preference number: 4 (lower is better)
Translates to: IKPRLSFALQNSTFPDWLVFRSG*AHQRHH
Trigger: GTGGTGTCTCTGATGTGCTCAGCCCGAGCGGAATAC...GAGCCAGTCAGGGAAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR TCA 90 bp AGAAGCCAGCTCCCTCGACATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCAGAGCCAATGGAACATaGGCTGACACTGGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: RSQLPRHQAQALICAAELRANGT*ADTGWP
Trigger: AGGCCAGCCAGTGTCAGCTCATGTTCCATTGGCTCT...GAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGATGTCGAGGGAGCTGGCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp GCAGACCACAGGGTTCCCAGGCCAAAGAGTAATGCAGTAAATGAAATTGGCTACGCCAGGGCGTCTGCGTaGAGTCCCCCACATGGGCCA +
Preference number: 4 (lower is better)
Translates to: ADHRVPRPKSNAVNEIGYARASA*SPPHGP
Trigger: TGGCCCATGTGGGGGACTGCACGCAGACGCCCTGGC...GTAGCCAATTTCATTTACTGCATTACTCTTTGGCCTGGGAACCCTGTGGTCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp CTCGACATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCACTTTCCCTGACCTCCGGCTCAGCAGCTaGTCATTCTCGGATGAGGCA +
Preference number: 4 (lower is better)
Translates to: LDIKPRLSFALQNSTFPDLRLSS*SFSDEA
Trigger: TGCCTCATCCGAGAATGAGCAGCTGCTGAGCCGGAG...GTCAGGGAAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGATGTCGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp ATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCACTTTCCCTGACTGGCTCTCCCGGCTGACTTGTTaGTGGTGGCAGACTTCTCCC +
Preference number: 4 (lower is better)
Translates to: IKPRLSFALQNSTFPDWLSRLTC*WWQTSP
Trigger: GGGAGAAGTCTGCCACCAGCAACAAGTCAGCCGGGA...GAGCCAGTCAGGGAAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp CCTAAGACTGAAGTGGAAGGCCATTCACATGTAGTGCAGACCACAGGGTTCCCACACAGGTGGCCACCGTaGCAGCCCTCTCAGAAGCAG +
Preference number: 4 (lower is better)
Translates to: PKTEVEGHSHVVQTTGFPHRWPP*QPSQKQ
Trigger: CTGCTTCTGAGAGGGCTGCCACGGTGGCCACCTGTG...TGGGAACCCTGTGGTCTGCACTACATGTGAATGGCCTTCCACTTCAGTCTTAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp AGCTCCCTAAAAATGGCAGGTGGAGAGCCAATGGAACATGAGCTGACACTGGCTCACAGGTGGCCACCGTaGCAGCCCTCTCAGAAGCAG +
Preference number: 4 (lower is better)
Translates to: SSLKMAGGEPMEHELTLAHRWPP*QPSQKQ
Trigger: CTGCTTCTGAGAGGGCTGCCACGGTGGCCACCTGTG...AGCCAGTGTCAGCTCATGTTCCATTGGCTCTCCACCTGCCATTTTTAGGGAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp AGCAGAGAACAGCCACCCCACTCTTTCGCTGAAAACATTCTGAGGAGGGTGCAACTGGTGTCAGCACGGTaGCCCGGAAGAAGCCCTCAC +
Preference number: 4 (lower is better)
Translates to: SREQPPHSFAENILRRVQLVSAR*PGRSPH
Trigger: GTGAGGGCTTCTTCCGGGCCACCGTGCTGACACCAG...TTGCACCCTCCTCAGAATGTTTTCAGCGAAAGAGTGGGGTGGCTGTTCTCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp CTCGACATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCACTTTCCCTGACTGGCAGACTTCTCCCTaGCCAGGTGAACCAGCGACA +
Preference number: 4 (lower is better)
Translates to: LDIKPRLSFALQNSTFPDWQTSP*PGEPAT
Trigger: TGTCGCTGGTTCACCTGGCCAGGGAGAAGTCTGCCA...GTCAGGGAAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGATGTCGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp ATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCACTTTCCCTGACTGGCTCTGGCAGACTTCTCCCTaGCCAGGTGAACCAGCGACA +
Preference number: 4 (lower is better)
Translates to: IKPRLSFALQNSTFPDWLWQTSP*PGEPAT
Trigger: TGTCGCTGGTTCACCTGGCCAGGGAGAAGTCTGCCA...GAGCCAGTCAGGGAAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp AGAAGCCAGCTCCCTCGACATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCTCGAGGCAATCAAATaGCAGCTCCGTGGGGCTAAG +
Preference number: 4 (lower is better)
Translates to: RSQLPRHQAQALICAAELLEAIK*QLRGAK
Trigger: CTTAGCCCCACGGAGCTGCCATTTGATTGCCTCGAG...GAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGATGTCGAGGGAGCTGGCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp AGAAGCCAGCTCCCTCGACATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCAAGCTCTCGGCGAGGTaGCGCCACGTTTTCACAACA +
Preference number: 4 (lower is better)
Translates to: RSQLPRHQAQALICAAELKLSAR*RHVFTT
Trigger: TGTTGTGAAAACGTGGCGCCACCTCGCCGAGAGCTT...GAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGATGTCGAGGGAGCTGGCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR CAA 72 bp AAGCCAGCTCCCTCGACATCAAGCCCAGGCTCTCATTaGCGCTGCAGAACTCCACTTTCCCTGACTGGCTCA +
Preference number: 4 (lower is better)
Translates to: KPAPSTSSPGSH*RCRTPLSLTGS
Trigger: TGAGCCAGTCAGGGAAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGATGTCGAGGGAGCTGGCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR TCA 90 bp AGCAGAGAACAGCCACCCCACTCTTTCGCTGAAAACATTCTGAGGAGGGTGCAACCATCCAGTTCTGGGTaGCAGGCTTCACAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: SREQPPHSFAENILRRVQPSSSG*QASQVA
Trigger: GGCCACCTGTGAAGCCTGTCACCCAGAACTGGATGG...TTGCACCCTCCTCAGAATGTTTTCAGCGAAAGAGTGGGGTGGCTGTTCTCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR TCA 90 bp AGAAGCCAGCTCCCTCGACATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCATTTACTCTGCCTGGTaGGGTACAGGCGAGCATCTG +
Preference number: 4 (lower is better)
Translates to: RSQLPRHQAQALICAAELIYSAW*GTGEHL
Trigger: CAGATGCTCGCCTGTACCTCACCAGGCAGAGTAAAT...GAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGATGTCGAGGGAGCTGGCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR TCA 90 bp AGCTCCCTAAAAATGGCAGGTGGAGAGCCAATGGAACATGAGCTGACACTGGCTTCCGACAGGGGGAGTTaGCGGAGAGTCCAGGAAGCA +
Preference number: 4 (lower is better)
Translates to: SSLKMAGGEPMEHELTLASDRGS*RRVQEA
Trigger: TGCTTCCTGGACTCTCCGTCAACTCCCCCTGTCGGA...AGCCAGTGTCAGCTCATGTTCCATTGGCTCTCCACCTGCCATTTTTAGGGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp CTGGAGTGCAAACTCCTTAAAGACAGGGACCAGATTCTTCACTTCTGTCATTCCGGGAGCCAGGGCGTCTaGGTGCAGTCCCCCACATGG +
Preference number: 4 (lower is better)
Translates to: LECKLLKDRDQILHFCHSGSQGV*VQSPTW
Trigger: CCATGTGGGGGACTGCACGCAGACGCCCTGGCTCCC...GGAATGACAGAAGTGAAGAATCTGGTCCCTGTCTTTAAGGAGTTTGCACTCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp GCAGACCACAGGGTTCCCAGGCCAAAGAGTAATGCAGTAAATGAAATTGGCTACAGGGAGACAGGGTGCTaGTGCCCGAGGTGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: ADHRVPRPKSNAVNEIGYRETGC*CPRCQG
Trigger: TCCCTGGCACCTCGGGCAGCAGCACCCTGTCTCCCT...GTAGCCAATTTCATTTACTGCATTACTCTTTGGCCTGGGAACCCTGTGGTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp TGTAGTGCAGACCACAGGGTTCCCAGGCCAAAGAGTAATGCAGTAAATGAAATTAGCTCCGGGGAGCCCTaGTTGTCAGGGGCGGGCTCC +
Preference number: 4 (lower is better)
Translates to: CSADHRVPRPKSNAVNEISSGEP*LSGAGS
Trigger: GGAGCCCGCCCCTGACAAGCAGGGCTCCCCGGAGCT...AATTTCATTTACTGCATTACTCTTTGGCCTGGGAACCCTGTGGTCTGCACTACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp AGGCGAGCATCTGAAAGTATCCCGGCTCTAGTCCTTTATCTTTGGTTAAATTGGAGCTCCGGGGAGCCCTaGTTGTCAGGGGCGGGCTCC +
Preference number: 4 (lower is better)
Translates to: RRASESIPALVLYLWLNWSSGEP*LSGAGS
Trigger: GGAGCCCGCCCCTGACAAGCAGGGCTCCCCGGAGCT...CCAATTTAACCAAAGATAAAGGACTAGAGCCGGGATACTTTCAGATGCTCGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp AGAAGCCAGCTCCCTCGACATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCATGCGGTCAAAGAGTTaGATGCCGTCTGTCATGCCC +
Preference number: 4 (lower is better)
Translates to: RSQLPRHQAQALICAAELMRSKS*MPSVMP
Trigger: GGGCATGACAGACGGCATGCAACTCTTTGACCGCAT...GAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGATGTCGAGGGAGCTGGCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp AGAAGCCAGCTCCCTCGACATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCCACTCCAGTATGTCTaGACACAAGGACTCCACAGC +
Preference number: 4 (lower is better)
Translates to: RSQLPRHQAQALICAAELPLQYV*TQGLHS
Trigger: GCTGTGGAGTCCTTGTGTGCAGACATACTGGAGTGG...GAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGATGTCGAGGGAGCTGGCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp AGAAGCCAGCTCCCTCGACATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCGCCCAGGCTCTCATTTaGGCTGCAGAACTCCACTTT +
Preference number: 4 (lower is better)
Translates to: RSQLPRHQAQALICAAELAQALI*AAELHF
Trigger: AAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTGGGC...GAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGATGTCGAGGGAGCTGGCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp AGAAGCCAGCTCCCTCGACATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCGCTCCCTGCCCTGTCTaGAAGTTTGGAAACTCAGTC +
Preference number: 4 (lower is better)
Translates to: RSQLPRHQAQALICAAELAPCPV*KFGNSV
Trigger: GACTGAGTTTCCAAACTTGCAGACAGGGCAGGGAGC...GAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGATGTCGAGGGAGCTGGCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp GCAGACCACAGGGTTCCCAGGCCAAAGAGTAATGCAGTAAATGAAATTGGCTACTCCCCGGGTGGCTGGTaGAACAGGCTGGGGAGAGAG +
Preference number: 4 (lower is better)
Translates to: ADHRVPRPKSNAVNEIGYSPGGW*NRLGRE
Trigger: CTCTCTCCCCAGCCTGTTGCACCAGCCACCCGGGGA...GTAGCCAATTTCATTTACTGCATTACTCTTTGGCCTGGGAACCCTGTGGTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp ATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCACTTTCCCTGACTGGCTCTCTGGTAGCCTCCTTTaGAAAACTTCTCCGCCGGGC +
Preference number: 4 (lower is better)
Translates to: IKPRLSFALQNSTFPDWLSGSLL*KTSPPG
Trigger: GCCCGGCGGAGAAGTTTTCCAAAGGAGGCTACCAGA...GAGCCAGTCAGGGAAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp AGCTCCCTAAAAATGGCAGGTGGAGAGCCAATGGAACATGAGCTGACACTGGCTATTCTCCATGTCCCCTaGTGTCAGCACGGTGGCCCG +
Preference number: 4 (lower is better)
Translates to: SSLKMAGGEPMEHELTLAILHVP*CQHGGP
Trigger: CGGGCCACCGTGCTGACACCAGGGGACATGGAGAAT...AGCCAGTGTCAGCTCATGTTCCATTGGCTCTCCACCTGCCATTTTTAGGGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp GCAGACCACAGGGTTCCCAGGCCAAAGAGTAATGCAGTAAATGAAATTGGCTACACGCTCTTCCCCGGGTaGCTGGTGCAACAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: ADHRVPRPKSNAVNEIGYTLFPG*LVQQAG
Trigger: CCCAGCCTGTTGCACCAGCCACCCGGGGAAGAGCGT...GTAGCCAATTTCATTTACTGCATTACTCTTTGGCCTGGGAACCCTGTGGTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp AGAAGCCAGCTCCCTCGACATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCTTGGTGGGCTTTGCTaGAGTTGCTGTCAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: RSQLPRHQAQALICAAELLGGLC*SCCQLL
Trigger: GAGAAGCTGACAGCAACTCCAGCAAAGCCCACCAAG...GAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGATGTCGAGGGAGCTGGCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp AGAAGCCAGCTCCCTCGACATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCATCGTTCTCGCTCTTaGTGGGCTTTGCTGGAGTTG +
Preference number: 4 (lower is better)
Translates to: RSQLPRHQAQALICAAELHRSRS*WALLEL
Trigger: CAACTCCAGCAAAGCCCACCAAGAGCGAGAACGATG...GAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGATGTCGAGGGAGCTGGCTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp ATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCACTTTCCCTGACTGGCTCCTGACTTGTTGCTGGTaGCAGACTTCTCCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: IKPRLSFALQNSTFPDWLLTCCW*QTSPWP
Trigger: TGGCCAGGGAGAAGTCTGCCACCAGCAACAAGTCAG...GAGCCAGTCAGGGAAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp AGAGAGGAAAAGACAAGGCCCAAGGTGGCACAACTAGAAGCCAGCTCCCTCGACAAGCTCTCGGCGAGGTaGCGCCACGTTTTCACAACA +
Preference number: 4 (lower is better)
Translates to: REEKTRPKVAQLEASSLDKLSAR*RHVFTT
Trigger: TGTTGTGAAAACGTGGCGCCACCTCGCCGAGAGCTT...GTCGAGGGAGCTGGCTTCTAGTTGTGCCACCTTGGGCCTTGTCTTTTCCTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp CCTAAGACTGAAGTGGAAGGCCATTCACATGTAGTGCAGACCACAGGGTTCCCACCCTCGTTGGCTCCTTaGCTTGTCCTGGGAGGACAG +
Preference number: 4 (lower is better)
Translates to: PKTEVEGHSHVVQTTGFPPSLAP*LVLGGQ
Trigger: CTGTCCTCCCAGGACAAGCCAAGGAGCCAACGAGGG...TGGGAACCCTGTGGTCTGCACTACATGTGAATGGCCTTCCACTTCAGTCTTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp AGCTCCCTAAAAATGGCAGGTGGAGAGCCAATGGAACATGAGCTGACACTGGCTCCCTCGTTGGCTCCTTaGCTTGTCCTGGGAGGACAG +
Preference number: 4 (lower is better)
Translates to: SSLKMAGGEPMEHELTLAPSLAP*LVLGGQ
Trigger: CTGTCCTCCCAGGACAAGCCAAGGAGCCAACGAGGG...AGCCAGTGTCAGCTCATGTTCCATTGGCTCTCCACCTGCCATTTTTAGGGAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp AGCAGAGAACAGCCACCCCACTCTTTCGCTGAAAACATTCTGAGGAGGGTGCAACTGAGCCTCCCAGGATaGCTCGGATGGTCTGGCTTC +
Preference number: 4 (lower is better)
Translates to: SREQPPHSFAENILRRVQLSLPG*LGWSGF
Trigger: GAAGCCAGACCATCCGAGCCATCCTGGGAGGCTCAG...TTGCACCCTCCTCAGAATGTTTTCAGCGAAAGAGTGGGGTGGCTGTTCTCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000409271.5
CDS-3UTR TCA 90 bp CCTAAGACTGAAGTGGAAGGCCATTCACATGTAGTGCAGACCACAGGGTTCCCAGTATTCCGCTCGGGCTaGGCACATCAGAGACACCAC +
Preference number: 4 (lower is better)
Translates to: PKTEVEGHSHVVQTTGFPVFRSG*AHQRHH
Trigger: GTGGTGTCTCTGATGTGCTCAGCCCGAGCGGAATAC...TGGGAACCCTGTGGTCTGCACTACATGTGAATGGCCTTCCACTTCAGTCTTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR TCA 90 bp CCTAAGACTGAAGTGGAAGGCCATTCACATGTAGTGCAGACCACAGGGTTCCCACAGGTGTCCTTGGCCTaGGAGTTCTTTGTGGGCGTG +
Preference number: 4 (lower is better)
Translates to: PKTEVEGHSHVVQTTGFPQVSLA*EFFVGV
Trigger: CACGCCCACAAAGAACTCTCAGGCCAAGGACACCTG...TGGGAACCCTGTGGTCTGCACTACATGTGAATGGCCTTCCACTTCAGTCTTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR TCA 90 bp AGCAGAGAACAGCCACCCCACTCTTTCGCTGAAAACATTCTGAGGAGGGTGCAACAGGTGTCCTTGGCCTaGGAGTTCTTTGTGGGCGTG +
Preference number: 4 (lower is better)
Translates to: SREQPPHSFAENILRRVQQVSLA*EFFVGV
Trigger: CACGCCCACAAAGAACTCTCAGGCCAAGGACACCTG...TTGCACCCTCCTCAGAATGTTTTCAGCGAAAGAGTGGGGTGGCTGTTCTCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR TCA 90 bp CTGGAGTGCAAACTCCTTAAAGACAGGGACCAGATTCTTCACTTCTGTCATTCCATGGGTGGTGGAGGCTaGGCCTCCCAGGATGGCTCG +
Preference number: 4 (lower is better)
Translates to: LECKLLKDRDQILHFCHSMGGGG*ASQDGS
Trigger: CGAGCCATCCTGGGAGGCTCAGCCTCCACCACCCAT...GGAATGACAGAAGTGAAGAATCTGGTCCCTGTCTTTAAGGAGTTTGCACTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409271.5
CDS-3UTR GCA 90 bp TGTAGTGCAGACCACAGGGTTCCCAGGCCAAAGAGTAATGCAGTAAATGAAATTGGGAGCCAGGGCGTCTaGGTGCAGTCCCCCACATGG +
Preference number: 4 (lower is better)
Translates to: CSADHRVPRPKSNAVNEIGSQGV*VQSPTW
Trigger: CCATGTGGGGGACTGCACGCAGACGCCCTGGCTCCC...AATTTCATTTACTGCATTACTCTTTGGCCTGGGAACCCTGTGGTCTGCACTACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp AGAAGCCAGCTCCCTCGACATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCAGGAGTAGCAGACCATaGCATAGATGTTCCTCGGTC +
Preference number: 4 (lower is better)
Translates to: RSQLPRHQAQALICAAELRSSRP*HRCSSV
Trigger: GACCGAGGAACATCTATGGCATGGTCTGCTACTCCT...GAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGATGTCGAGGGAGCTGGCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp CCATCCTTCATCATCCCAGTAGGGAGTCATCTCCCGCTTAGAACTTCTATTAACAGGGAGACAGGGTGCTaGTGCCCGAGGTGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: PSFIIPVGSHLPLRTSINRETGC*CPRCQG
Trigger: TCCCTGGCACCTCGGGCAGCAGCACCCTGTCTCCCT...GTTAATAGAAGTTCTAAGCGGGAGATGACTCCCTACTGGGATGATGAAGGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp ATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCACTTTCCCTGACTGGCTCGCTCTTGGTGGGCTTTaGTGGAGTTGCTGTCAGCTT +
Preference number: 4 (lower is better)
Translates to: IKPRLSFALQNSTFPDWLALGGL*WSCCQL
Trigger: AAGCTGACAGCAACTCCAGCAAAGCCCACCAAGAGC...GAGCCAGTCAGGGAAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp AGCTCCCTAAAAATGGCAGGTGGAGAGCCAATGGAACATGAGCTGACACTGGCTCTCCGGCTCAGCAGCTaGTCATTCTCGGATGAGGCA +
Preference number: 4 (lower is better)
Translates to: SSLKMAGGEPMEHELTLALRLSS*SFSDEA
Trigger: TGCCTCATCCGAGAATGAGCAGCTGCTGAGCCGGAG...AGCCAGTGTCAGCTCATGTTCCATTGGCTCTCCACCTGCCATTTTTAGGGAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp AGAATTATGAATATCTCCACACAAAAATGGCAGGATGGAGTCCCAGCTTTGGTCAGCTCCGGGGAGCCCTaGTTGTCAGGGGCGGGCTCC +
Preference number: 4 (lower is better)
Translates to: RIMNISTQKWQDGVPALVSSGEP*LSGAGS
Trigger: GGAGCCCGCCCCTGACAAGCAGGGCTCCCCGGAGCT...GACCAAAGCTGGGACTCCATCCTGCCATTTTTGTGTGGAGATATTCATAATTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp ATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCACTTTCCCTGACTGGCTCGGTCAAAGAGTTGCATaGCGTCTGTCATGCCCCCAA +
Preference number: 4 (lower is better)
Translates to: IKPRLSFALQNSTFPDWLGQRVA*RLSCPQ
Trigger: TTGGGGGCATGACAGACGGCATGCAACTCTTTGACC...GAGCCAGTCAGGGAAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp CTCGACATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCACTTTCCCTGACGACAGCCCACAGGCATaGTTTTCAGGATGCAGCATG +
Preference number: 4 (lower is better)
Translates to: LDIKPRLSFALQNSTFPDDSPQA*FSGCSM
Trigger: CATGCTGCATCCTGAAAAGCATGCCTGTGGGCTGTC...GTCAGGGAAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGATGTCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp GCAGACCACAGGGTTCCCAGGCCAAAGAGTAATGCAGTAAATGAAATTGGCTACCACAGGTGGCCACCGTaGCAGCCCTCTCAGAAGCAG +
Preference number: 4 (lower is better)
Translates to: ADHRVPRPKSNAVNEIGYHRWPP*QPSQKQ
Trigger: CTGCTTCTGAGAGGGCTGCCACGGTGGCCACCTGTG...GTAGCCAATTTCATTTACTGCATTACTCTTTGGCCTGGGAACCCTGTGGTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp AGCTCCCTAAAAATGGCAGGTGGAGAGCCAATGGAACATGAGCTGACACTGGCTTCCCAAGGGCTCACCTaGCTTCTGTTGGAGGTCAGC +
Preference number: 4 (lower is better)
Translates to: SSLKMAGGEPMEHELTLASQGLT*LLLEVS
Trigger: GCTGACCTCCAACAGAAGCCAGGTGAGCCCTTGGGA...AGCCAGTGTCAGCTCATGTTCCATTGGCTCTCCACCTGCCATTTTTAGGGAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000258443.7
ENST00000376651.1
CDS-3UTR CCA 90 bp AGCAGAGAACAGCCACCCCACTCTTTCGCTGAAAACATTCTGAGGAGGGTGCAAGCTGGTGCAACAGGCTaGGGCAGAGGGCTTTGTCTT +
Preference number: 4 (lower is better)
Translates to: SREQPPHSFAENILRRVQAGATG*GRGLCL
Trigger: AAGACAAAGCCCTCTGCCCCAGCCTGTTGCACCAGC...TTGCACCCTCCTCAGAATGTTTTCAGCGAAAGAGTGGGGTGGCTGTTCTCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258443.7
CDS-3UTR CCA 90 bp CTGGAGTGCAAACTCCTTAAAGACAGGGACCAGATTCTTCACTTCTGTCATTCCACGCTCTTCCCCGGGTaGCTGGTGCAACAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LECKLLKDRDQILHFCHSTLFPG*LVQQAG
Trigger: CCCAGCCTGTTGCACCAGCCACCCGGGGAAGAGCGT...GGAATGACAGAAGTGAAGAATCTGGTCCCTGTCTTTAAGGAGTTTGCACTCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp ATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCACTTTCCCTGACTGGCTCCATCGTTCTCGCTCTTaGTGGGCTTTGCTGGAGTTG +
Preference number: 4 (lower is better)
Translates to: IKPRLSFALQNSTFPDWLHRSRS*WALLEL
Trigger: CAACTCCAGCAAAGCCCACCAAGAGCGAGAACGATG...GAGCCAGTCAGGGAAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp CCTAAGACTGAAGTGGAAGGCCATTCACATGTAGTGCAGACCACAGGGTTCCCACGGCTGACTTGTTGCTaGTGGCAGACTTCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: PKTEVEGHSHVVQTTGFPRLTCC*WQTSPW
Trigger: CCAGGGAGAAGTCTGCCACCAGCAACAAGTCAGCCG...TGGGAACCCTGTGGTCTGCACTACATGTGAATGGCCTTCCACTTCAGTCTTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp AGAGAGGAAAAGACAAGGCCCAAGGTGGCACAACTAGAAGCCAGCTCCCTCGACGAGTTAATGGTGGGCTaGTGGGCTGGCTGTATGAGT +
Preference number: 4 (lower is better)
Translates to: REEKTRPKVAQLEASSLDELMVG*WAGCMS
Trigger: ACTCATACAGCCAGCCCACCAGCCCACCATTAACTC...GTCGAGGGAGCTGGCTTCTAGTTGTGCCACCTTGGGCCTTGTCTTTTCCTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp ATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCACTTTCCCTGACTGGCTCTCCACTTTCCCTGACTaGCTCAGAAGGCTGAGTCTG +
Preference number: 4 (lower is better)
Translates to: IKPRLSFALQNSTFPDWLSTFPD*LRRLSL
Trigger: CAGACTCAGCCTTCTGAGCCAGTCAGGGAAAGTGGA...GAGCCAGTCAGGGAAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp CTGGAGTGCAAACTCCTTAAAGACAGGGACCAGATTCTTCACTTCTGTCATTCCCAGCACTGGAGAGGCTaGAGCGGGCACGTTCAGCCC +
Preference number: 4 (lower is better)
Translates to: LECKLLKDRDQILHFCHSQHWRG*SGHVQP
Trigger: GGGCTGAACGTGCCCGCTCCAGCCTCTCCAGTGCTG...GGAATGACAGAAGTGAAGAATCTGGTCCCTGTCTTTAAGGAGTTTGCACTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376651.1
CDS-3UTR CCA 90 bp TTATCAAAATGTTTGAGCTGCTTCTTCACTAGGATGCCATCCTTCATCATCCCACAGGGCACCGGCGCATaGGGGCCGTCACCTGGGGCA +
Preference number: 4 (lower is better)
Translates to: LSKCLSCFFTRMPSFIIPQGTGA*GPSPGA
Trigger: TGCCCCAGGTGACGGCCCCCATGCGCCGGTGCCCTG...TGGGATGATGAAGGATGGCATCCTAGTGAAGAAGCAGCTCAAACATTTTGATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376651.1
ENST00000409271.5
CDS-3UTR TCA 90 bp CTGGAGTGCAAACTCCTTAAAGACAGGGACCAGATTCTTCACTTCTGTCATTCCCCGGGAACTCTTCCTTaGCCGCTCCCTGCCCTGTCT +
Preference number: 4 (lower is better)
Translates to: LECKLLKDRDQILHFCHSPGTLP*PLPALS
Trigger: AGACAGGGCAGGGAGCGGTCAAGGAAGAGTTCCCGG...GGAATGACAGAAGTGAAGAATCTGGTCCCTGTCTTTAAGGAGTTTGCACTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR TCA 90 bp GCAGACCACAGGGTTCCCAGGCCAAAGAGTAATGCAGTAAATGAAATTGGCTACCCATCCAGTTCTGGGTaGCAGGCTTCACAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: ADHRVPRPKSNAVNEIGYPSSSG*QASQVA
Trigger: GGCCACCTGTGAAGCCTGTCACCCAGAACTGGATGG...GTAGCCAATTTCATTTACTGCATTACTCTTTGGCCTGGGAACCCTGTGGTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR TCA 90 bp CCTAAGACTGAAGTGGAAGGCCATTCACATGTAGTGCAGACCACAGGGTTCCCATGGTGGACATTGCAATaGTCAGGGCAGTGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: PKTEVEGHSHVVQTTGFPWWTLQ*SGQWPG
Trigger: ACCTGGCCACTGCCCTGATCATTGCAATGTCCACCA...TGGGAACCCTGTGGTCTGCACTACATGTGAATGGCCTTCCACTTCAGTCTTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR TCA 90 bp CTCGACATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCACTTTCCCTGACTCTGCACCAGTTTTGTaGGTAGCTCAGGGATGCTGT +
Preference number: 4 (lower is better)
Translates to: LDIKPRLSFALQNSTFPDSAPVL*VAQGCC
Trigger: ACAGCATCCCTGAGCTACTCACAAAACTGGTGCAGA...GTCAGGGAAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGATGTCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR TCA 90 bp CCTAAGACTGAAGTGGAAGGCCATTCACATGTAGTGCAGACCACAGGGTTCCCACAGGGAGTTCAGCAGTaGACTCTAACCCCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: PKTEVEGHSHVVQTTGFPQGVQQ*TLTPGV
Trigger: CACACCAGGGGTTAGAGTTCACTGCTGAACTCCCTG...TGGGAACCCTGTGGTCTGCACTACATGTGAATGGCCTTCCACTTCAGTCTTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp CAAAAATGGCAGGATGGAGTCCCAGCTTTGGTCAGTGAGAATTATTATGATCTCGCCAGGGCGTCTGCGTaGAGTCCCCCACATGGGCCA +
Preference number: 4 (lower is better)
Translates to: QKWQDGVPALVSENYYDLARASA*SPPHGP
Trigger: TGGCCCATGTGGGGGACTGCACGCAGACGCCCTGGC...GAGATCATAATAATTCTCACTGACCAAAGCTGGGACTCCATCCTGCCATTTTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp GCAGACCACAGGGTTCCCAGGCCAAAGAGTAATGCAGTAAATGAAATTGGCTACTGCTGCTGCCCGAGGTaGCAGGGAAGTTGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: ADHRVPRPKSNAVNEIGYCCCPR*QGSWQK
Trigger: CTTCTGCCAACTTCCCTGGCACCTCGGGCAGCAGCA...GTAGCCAATTTCATTTACTGCATTACTCTTTGGCCTGGGAACCCTGTGGTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp AGGCGAGCATCTGAAAGTATCCCGGCTCTAGTCCTTTATCTTTGGTTAAATTGGGGAAGGGAGACAGGGTaGTGCTGCCCGAGGTGCCAG +
Preference number: 4 (lower is better)
Translates to: RRASESIPALVLYLWLNWGRETG*CCPRCQ
Trigger: CTGGCACCTCGGGCAGCAGCACCCTGTCTCCCTTCC...CCAATTTAACCAAAGATAAAGGACTAGAGCCGGGATACTTTCAGATGCTCGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp ATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCACTTTCCCTGACTGGCTCGAAGATGGTGGACATTaGAATGATCAGGGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: IKPRLSFALQNSTFPDWLEDGGH*NDQGSG
Trigger: GCCACTGCCCTGATCATTGCAATGTCCACCATCTTC...GAGCCAGTCAGGGAAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp CTCGACATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCACTTTCCCTGACTCCAGCCGCTCAATCTaGACCAGTTTTGTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: LDIKPRLSFALQNSTFPDSSRSI*TSFVSS
Trigger: GCTACTCACAAAACTGGTGCAGATTGAGCGGCTGGA...GTCAGGGAAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGATGTCGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp ATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCACTTTCCCTGACTGGCTCTCCAGCCGCTCAATCTaGACCAGTTTTGTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: IKPRLSFALQNSTFPDWLSSRSI*TSFVSS
Trigger: GCTACTCACAAAACTGGTGCAGATTGAGCGGCTGGA...GAGCCAGTCAGGGAAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp AGCTCCCTAAAAATGGCAGGTGGAGAGCCAATGGAACATGAGCTGACACTGGCTCGTAGTCCTCGTCTTTaGTGCCGTAGCCACAGGACA +
Preference number: 4 (lower is better)
Translates to: SSLKMAGGEPMEHELTLARSPRL*CRSHRT
Trigger: TGTCCTGTGGCTACGGCACCAAAGACGAGGACTACG...AGCCAGTGTCAGCTCATGTTCCATTGGCTCTCCACCTGCCATTTTTAGGGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp CCTAAGACTGAAGTGGAAGGCCATTCACATGTAGTGCAGACCACAGGGTTCCCATCTGGTAGCCTCCTTTaGAAAACTTCTCCGCCGGGC +
Preference number: 4 (lower is better)
Translates to: PKTEVEGHSHVVQTTGFPSGSLL*KTSPPG
Trigger: GCCCGGCGGAGAAGTTTTCCAAAGGAGGCTACCAGA...TGGGAACCCTGTGGTCTGCACTACATGTGAATGGCCTTCCACTTCAGTCTTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp CCTAAGACTGAAGTGGAAGGCCATTCACATGTAGTGCAGACCACAGGGTTCCCAAGGTGCCAGGGAAGTTaGCAGAAGCTCCTGAAGTGG +
Preference number: 4 (lower is better)
Translates to: PKTEVEGHSHVVQTTGFPRCQGS*QKLLKW
Trigger: CCACTTCAGGAGCTTCTGCCAACTTCCCTGGCACCT...TGGGAACCCTGTGGTCTGCACTACATGTGAATGGCCTTCCACTTCAGTCTTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp AGCAGAGAACAGCCACCCCACTCTTTCGCTGAAAACATTCTGAGGAGGGTGCAAGTGGCCAGGTGTCCTTaGCCTGAGAGTTCTTTGTGG +
Preference number: 4 (lower is better)
Translates to: SREQPPHSFAENILRRVQVARCP*PESSLW
Trigger: CCACAAAGAACTCTCAGGCCAAGGACACCTGGCCAC...TTGCACCCTCCTCAGAATGTTTTCAGCGAAAGAGTGGGGTGGCTGTTCTCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp AGCTCCCTAAAAATGGCAGGTGGAGAGCCAATGGAACATGAGCTGACACTGGCTGTGGCCAGGTGTCCTTaGCCTGAGAGTTCTTTGTGG +
Preference number: 4 (lower is better)
Translates to: SSLKMAGGEPMEHELTLAVARCP*PESSLW
Trigger: CCACAAAGAACTCTCAGGCCAAGGACACCTGGCCAC...AGCCAGTGTCAGCTCATGTTCCATTGGCTCTCCACCTGCCATTTTTAGGGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp AGCAGAGAACAGCCACCCCACTCTTTCGCTGAAAACATTCTGAGGAGGGTGCAACTGACTTGTTGCTGGTaGCAGACTTCTCCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: SREQPPHSFAENILRRVQLTCCW*QTSPWP
Trigger: TGGCCAGGGAGAAGTCTGCCACCAGCAACAAGTCAG...TTGCACCCTCCTCAGAATGTTTTCAGCGAAAGAGTGGGGTGGCTGTTCTCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp GCAGACCACAGGGTTCCCAGGCCAAAGAGTAATGCAGTAAATGAAATTGGCTACTCAGGATGCAGCATGTaGCTGGGAGGCAGGTGGCAC +
Preference number: 4 (lower is better)
Translates to: ADHRVPRPKSNAVNEIGYSGCSM*LGGRWH
Trigger: GTGCCACCTGCCTCCCAGCCACATGCTGCATCCTGA...GTAGCCAATTTCATTTACTGCATTACTCTTTGGCCTGGGAACCCTGTGGTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp ATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCACTTTCCCTGACTGGCTCTTCTTGGCAGTCTTTTaGCACCACTCACAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: IKPRLSFALQNSTFPDWLFLAVF*HHSQLQ
Trigger: CTGGAGCTGTGAGTGGTGCCAAAAGACTGCCAAGAA...GAGCCAGTCAGGGAAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp AGAAGCCAGCTCCCTCGACATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCACAAAAATGGCAGGATaGAGTCCCAGCTTTGGTCAG +
Preference number: 4 (lower is better)
Translates to: RSQLPRHQAQALICAAELTKMAG*SPSFGQ
Trigger: CTGACCAAAGCTGGGACTCCATCCTGCCATTTTTGT...GAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGATGTCGAGGGAGCTGGCTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp CCAATTATAGAATCACTAACTAACATCTCATTGGCAGACGAGAAACTGAGGCAGGGTCCCTGGCACACCTaGCTCTCCGGCCGTCTGCCC +
Preference number: 4 (lower is better)
Translates to: PIIESLTNISLADEKLRQGPWHT*LSGRLP
Trigger: GGGCAGACGGCCGGAGAGCCAGGTGTGCCAGGGACC...CTGCCTCAGTTTCTCGTCTGCCAATGAGATGTTAGTTAGTGATTCTATAATTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376651.1
CDS-3UTR CCA 90 bp CCATCCTTCATCATCCCAGTAGGGAGTCATCTCCCGCTTAGAACTTCTATTAACTGCCCACATGGGTGGTaGAGGCTGAGCCTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: PSFIIPVGSHLPLRTSINCPHGW*RLSLPG
Trigger: TCCTGGGAGGCTCAGCCTCCACCACCCATGTGGGCA...GTTAATAGAAGTTCTAAGCGGGAGATGACTCCCTACTGGGATGATGAAGGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409271.5
CDS-3UTR TCA 90 bp AGGCGAGCATCTGAAAGTATCCCGGCTCTAGTCCTTTATCTTTGGTTAAATTGGCCGGGAACTCTTCCTTaGCCGCTCCCTGCCCTGTCT +
Preference number: 4 (lower is better)
Translates to: RRASESIPALVLYLWLNWPGTLP*PLPALS
Trigger: AGACAGGGCAGGGAGCGGTCAAGGAAGAGTTCCCGG...CCAATTTAACCAAAGATAAAGGACTAGAGCCGGGATACTTTCAGATGCTCGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR TCA 90 bp AGCAGAGAACAGCCACCCCACTCTTTCGCTGAAAACATTCTGAGGAGGGTGCAACTGCTCATTCTCGGATaGGGCATCGTTCTCGCTCTT +
Preference number: 4 (lower is better)
Translates to: SREQPPHSFAENILRRVQLLILG*GIVLAL
Trigger: AAGAGCGAGAACGATGCCTCATCCGAGAATGAGCAG...TTGCACCCTCCTCAGAATGTTTTCAGCGAAAGAGTGGGGTGGCTGTTCTCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR TCA 90 bp AGCAGAGAACAGCCACCCCACTCTTTCGCTGAAAACATTCTGAGGAGGGTGCAAATTTACTCTGCCTGGTaGGGTACAGGCGAGCATCTG +
Preference number: 4 (lower is better)
Translates to: SREQPPHSFAENILRRVQIYSAW*GTGEHL
Trigger: CAGATGCTCGCCTGTACCTCACCAGGCAGAGTAAAT...TTGCACCCTCCTCAGAATGTTTTCAGCGAAAGAGTGGGGTGGCTGTTCTCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR TCA 90 bp CTCGACATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCACTTTCCCTGACTCGCTGAAAACATTCTaGGGAGGGTGCAAGCTGTTA +
Preference number: 4 (lower is better)
Translates to: LDIKPRLSFALQNSTFPDSLKTF*GGCKLL
Trigger: TAACAGCTTGCACCCTCCTCAGAATGTTTTCAGCGA...GTCAGGGAAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGATGTCGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR TCA 90 bp CTCGACATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCACTTTCCCTGACTCTAATAGTGTGAAATaGGGCCAAAGCACCAGGAGC +
Preference number: 4 (lower is better)
Translates to: LDIKPRLSFALQNSTFPDSNSVK*GQSTRS
Trigger: GCTCCTGGTGCTTTGGCCTCATTTCACACTATTAGA...GTCAGGGAAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGATGTCGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp CCAATTATAGAATCACTAACTAACATCTCATTGGCAGACGAGAAACTGAGGCAGGCCAGGGCGTCTGCGTaGAGTCCCCCACATGGGCCA +
Preference number: 4 (lower is better)
Translates to: PIIESLTNISLADEKLRQARASA*SPPHGP
Trigger: TGGCCCATGTGGGGGACTGCACGCAGACGCCCTGGC...CTGCCTCAGTTTCTCGTCTGCCAATGAGATGTTAGTTAGTGATTCTATAATTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp CTGGAGTGCAAACTCCTTAAAGACAGGGACCAGATTCTTCACTTCTGTCATTCCTGCTGCTGCCCGAGGTaGCAGGGAAGTTGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: LECKLLKDRDQILHFCHSCCCPR*QGSWQK
Trigger: CTTCTGCCAACTTCCCTGGCACCTCGGGCAGCAGCA...GGAATGACAGAAGTGAAGAATCTGGTCCCTGTCTTTAAGGAGTTTGCACTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp AGCTCCCTAAAAATGGCAGGTGGAGAGCCAATGGAACATGAGCTGACACTGGCTGGTCAAAGAGTTGCATaGCGTCTGTCATGCCCCCAA +
Preference number: 4 (lower is better)
Translates to: SSLKMAGGEPMEHELTLAGQRVA*RLSCPQ
Trigger: TTGGGGGCATGACAGACGGCATGCAACTCTTTGACC...AGCCAGTGTCAGCTCATGTTCCATTGGCTCTCCACCTGCCATTTTTAGGGAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp AGCAGAGAACAGCCACCCCACTCTTTCGCTGAAAACATTCTGAGGAGGGTGCAAGACAGCCCACAGGCATaGTTTTCAGGATGCAGCATG +
Preference number: 4 (lower is better)
Translates to: SREQPPHSFAENILRRVQDSPQA*FSGCSM
Trigger: CATGCTGCATCCTGAAAAGCATGCCTGTGGGCTGTC...TTGCACCCTCCTCAGAATGTTTTCAGCGAAAGAGTGGGGTGGCTGTTCTCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp CTGAGTCTGAAACTCTCATGCCATGAGGCTAATCCACAAGTCTTAGATGCTCTTGGGCACGTTCAGCCCTaGTGCCATAGGTCCCTGGCA +
Preference number: 4 (lower is better)
Translates to: LSLKLSCHEANPQVLDALGHVQP*CHRSLA
Trigger: TGCCAGGGACCTATGGCAGCAGGGCTGAACGTGCCC...AAGAGCATCTAAGACTTGTGGATTAGCCTCATGGCATGAGAGTTTCAGACTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376651.1
CDS-3UTR GCA 90 bp AGAATTATGAATATCTCCACACAAAAATGGCAGGATGGAGTCCCAGCTTTGGTCCGTGTCCCGAGGGCCTaGAGAGGGCTTGCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: RIMNISTQKWQDGVPALVRVPRA*RGLAAP
Trigger: AGGAGCAGCAAGCCCTCTGCAGGCCCTCGGGACACG...GACCAAAGCTGGGACTCCATCCTGCCATTTTTGTGTGGAGATATTCATAATTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000409271.5
CDS-3UTR CCA 90 bp GCAGACCACAGGGTTCCCAGGCCAAAGAGTAATGCAGTAAATGAAATTGGCTACCGGCTGACTTGTTGCTaGTGGCAGACTTCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: ADHRVPRPKSNAVNEIGYRLTCC*WQTSPW
Trigger: CCAGGGAGAAGTCTGCCACCAGCAACAAGTCAGCCG...GTAGCCAATTTCATTTACTGCATTACTCTTTGGCCTGGGAACCCTGTGGTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp AGAAGCCAGCTCCCTCGACATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCAGGCCTTATTTCGTCTaGCTCCTTGAACATCCTAAG +
Preference number: 4 (lower is better)
Translates to: RSQLPRHQAQALICAAELRPYFV*LLEHPK
Trigger: CTTAGGATGTTCAAGGAGCCAGACGAAATAAGGCCT...GAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGATGTCGAGGGAGCTGGCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp AGCAGAGAACAGCCACCCCACTCTTTCGCTGAAAACATTCTGAGGAGGGTGCAAGAGTTAATGGTGGGCTaGTGGGCTGGCTGTATGAGT +
Preference number: 4 (lower is better)
Translates to: SREQPPHSFAENILRRVQELMVG*WAGCMS
Trigger: ACTCATACAGCCAGCCCACCAGCCCACCATTAACTC...TTGCACCCTCCTCAGAATGTTTTCAGCGAAAGAGTGGGGTGGCTGTTCTCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp AGAAGCCAGCTCCCTCGACATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCTGCAAGCTGTTATCCTaGAATGGCACACTCATCACA +
Preference number: 4 (lower is better)
Translates to: RSQLPRHQAQALICAAELCKLLS*NGTLIT
Trigger: TGTGATGAGTGTGCCATTCCAGGATAACAGCTTGCA...GAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGATGTCGAGGGAGCTGGCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp AGAGAGGAAAAGACAAGGCCCAAGGTGGCACAACTAGAAGCCAGCTCCCTCGACACAAAAATGGCAGGATaGAGTCCCAGCTTTGGTCAG +
Preference number: 4 (lower is better)
Translates to: REEKTRPKVAQLEASSLDTKMAG*SPSFGQ
Trigger: CTGACCAAAGCTGGGACTCCATCCTGCCATTTTTGT...GTCGAGGGAGCTGGCTTCTAGTTGTGCCACCTTGGGCCTTGTCTTTTCCTCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp ATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCACTTTCCCTGACTGGCTCACAAAAATGGCAGGATaGAGTCCCAGCTTTGGTCAG +
Preference number: 4 (lower is better)
Translates to: IKPRLSFALQNSTFPDWLTKMAG*SPSFGQ
Trigger: CTGACCAAAGCTGGGACTCCATCCTGCCATTTTTGT...GAGCCAGTCAGGGAAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp TGTAGTGCAGACCACAGGGTTCCCAGGCCAAAGAGTAATGCAGTAAATGAAATTTCTTCCCCGGGTGGCTaGTGCAACAGGCTGGGGAGA +
Preference number: 4 (lower is better)
Translates to: CSADHRVPRPKSNAVNEISSPGG*CNRLGR
Trigger: TCTCCCCAGCCTGTTGCACCAGCCACCCGGGGAAGA...AATTTCATTTACTGCATTACTCTTTGGCCTGGGAACCCTGTGGTCTGCACTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp GCAGACCACAGGGTTCCCAGGCCAAAGAGTAATGCAGTAAATGAAATTGGCTACCCAGGATGGCTCGGATaGTCTGGCTTCTGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: ADHRVPRPKSNAVNEIGYPGWLG*SGFCWR
Trigger: CCTCCAACAGAAGCCAGACCATCCGAGCCATCCTGG...GTAGCCAATTTCATTTACTGCATTACTCTTTGGCCTGGGAACCCTGTGGTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409271.5
CDS-3UTR CCA 90 bp CTGAGTCTGAAACTCTCATGCCATGAGGCTAATCCACAAGTCTTAGATGCTCTTAGGTGCCCACATGGGTaGTGGAGGCTGAGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: LSLKLSCHEANPQVLDALRCPHG*WRLSLP
Trigger: TGGGAGGCTCAGCCTCCACCACCCATGTGGGCACCT...AAGAGCATCTAAGACTTGTGGATTAGCCTCATGGCATGAGAGTTTCAGACTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409271.5
CDS-3UTR TCA 90 bp GCAGACCACAGGGTTCCCAGGCCAAAGAGTAATGCAGTAAATGAAATTGGCTACTGGTGGACATTGCAATaGTCAGGGCAGTGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: ADHRVPRPKSNAVNEIGYWWTLQ*SGQWPG
Trigger: ACCTGGCCACTGCCCTGATCATTGCAATGTCCACCA...GTAGCCAATTTCATTTACTGCATTACTCTTTGGCCTGGGAACCCTGTGGTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR TCA 90 bp GCAGACCACAGGGTTCCCAGGCCAAAGAGTAATGCAGTAAATGAAATTGGCTACTGTAGCCTGCCGTGCTaGTGCGGTCAAAGAGTTGCA +
Preference number: 4 (lower is better)
Translates to: ADHRVPRPKSNAVNEIGYCSLPC*CGQRVA
Trigger: TGCAACTCTTTGACCGCATCAGCACGGCAGGCTACA...GTAGCCAATTTCATTTACTGCATTACTCTTTGGCCTGGGAACCCTGTGGTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR TCA 90 bp CTCGACATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCACTTTCCCTGACTTCATTCAGCTTGTTTaGCGTCTTCCAGTGAAGTGG +
Preference number: 4 (lower is better)
Translates to: LDIKPRLSFALQNSTFPDFIQLV*RLPVKW
Trigger: CCACTTCACTGGAAGACGTCAAACAAGCTGAATGAA...GTCAGGGAAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGATGTCGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp GCAGACCACAGGGTTCCCAGGCCAAAGAGTAATGCAGTAAATGAAATTGGCTACAGTCCTCGTCTTTGGTaGCGTAGCCACAGGACAGGT +
Preference number: 4 (lower is better)
Translates to: ADHRVPRPKSNAVNEIGYSPRLW*RSHRTG
Trigger: ACCTGTCCTGTGGCTACGGCACCAAAGACGAGGACT...GTAGCCAATTTCATTTACTGCATTACTCTTTGGCCTGGGAACCCTGTGGTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp AGCAGAGAACAGCCACCCCACTCTTTCGCTGAAAACATTCTGAGGAGGGTGCAAAGGAGTAGCAGACCATaGCATAGATGTTCCTCGGTC +
Preference number: 4 (lower is better)
Translates to: SREQPPHSFAENILRRVQRSSRP*HRCSSV
Trigger: GACCGAGGAACATCTATGGCATGGTCTGCTACTCCT...TTGCACCCTCCTCAGAATGTTTTCAGCGAAAGAGTGGGGTGGCTGTTCTCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp AGGCGAGCATCTGAAAGTATCCCGGCTCTAGTCCTTTATCTTTGGTTAAATTGGTGCTGCTGCCCGAGGTaGCAGGGAAGTTGGCAGAAG +
Preference number: 4 (lower is better)
Translates to: RRASESIPALVLYLWLNWCCCPR*QGSWQK
Trigger: CTTCTGCCAACTTCCCTGGCACCTCGGGCAGCAGCA...CCAATTTAACCAAAGATAAAGGACTAGAGCCGGGATACTTTCAGATGCTCGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp CCAATTATAGAATCACTAACTAACATCTCATTGGCAGACGAGAAACTGAGGCAGAGGGAGACAGGGTGCTaGTGCCCGAGGTGCCAGGGA +
Preference number: 4 (lower is better)
Translates to: PIIESLTNISLADEKLRQRETGC*CPRCQG
Trigger: TCCCTGGCACCTCGGGCAGCAGCACCCTGTCTCCCT...CTGCCTCAGTTTCTCGTCTGCCAATGAGATGTTAGTTAGTGATTCTATAATTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp TTATCAAAATGTTTGAGCTGCTTCTTCACTAGGATGCCATCCTTCATCATCCCAGGAAGGGAGACAGGGTaGTGCTGCCCGAGGTGCCAG +
Preference number: 4 (lower is better)
Translates to: LSKCLSCFFTRMPSFIIPGRETG*CCPRCQ
Trigger: CTGGCACCTCGGGCAGCAGCACCCTGTCTCCCTTCC...TGGGATGATGAAGGATGGCATCCTAGTGAAGAAGCAGCTCAAACATTTTGATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp CCAATTATAGAATCACTAACTAACATCTCATTGGCAGACGAGAAACTGAGGCAGGGAAGGGAGACAGGGTaGTGCTGCCCGAGGTGCCAG +
Preference number: 4 (lower is better)
Translates to: PIIESLTNISLADEKLRQGRETG*CCPRCQ
Trigger: CTGGCACCTCGGGCAGCAGCACCCTGTCTCCCTTCC...CTGCCTCAGTTTCTCGTCTGCCAATGAGATGTTAGTTAGTGATTCTATAATTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp CTGGAGTGCAAACTCCTTAAAGACAGGGACCAGATTCTTCACTTCTGTCATTCCTCCCGGCTGACTTGTTaGTGGTGGCAGACTTCTCCC +
Preference number: 4 (lower is better)
Translates to: LECKLLKDRDQILHFCHSSRLTC*WWQTSP
Trigger: GGGAGAAGTCTGCCACCAGCAACAAGTCAGCCGGGA...GGAATGACAGAAGTGAAGAATCTGGTCCCTGTCTTTAAGGAGTTTGCACTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp CTCGACATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCACTTTCCCTGACCTGCACACATCCAATTaGTTGGACAAACACATGCCT +
Preference number: 4 (lower is better)
Translates to: LDIKPRLSFALQNSTFPDLHTSN*LDKHMP
Trigger: AGGCATGTGTTTGTCCAAGCAATTGGATGTGTGCAG...GTCAGGGAAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGATGTCGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp CTGGAGTGCAAACTCCTTAAAGACAGGGACCAGATTCTTCACTTCTGTCATTCCTCCCAAGGGCTCACCTaGCTTCTGTTGGAGGTCAGC +
Preference number: 4 (lower is better)
Translates to: LECKLLKDRDQILHFCHSSQGLT*LLLEVS
Trigger: GCTGACCTCCAACAGAAGCCAGGTGAGCCCTTGGGA...GGAATGACAGAAGTGAAGAATCTGGTCCCTGTCTTTAAGGAGTTTGCACTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258443.7
ENST00000376651.1
CDS-3UTR CCA 90 bp CAAAAATGGCAGGATGGAGTCCCAGCTTTGGTCAGTGAGAATTATTATGATCTCCTGGTGTCAGCACGGTaGCCCGGAAGAAGCCCTCAC +
Preference number: 4 (lower is better)
Translates to: QKWQDGVPALVSENYYDLLVSAR*PGRSPH
Trigger: GTGAGGGCTTCTTCCGGGCCACCGTGCTGACACCAG...GAGATCATAATAATTCTCACTGACCAAAGCTGGGACTCCATCCTGCCATTTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp CTGAGTCTGAAACTCTCATGCCATGAGGCTAATCCACAAGTCTTAGATGCTCTTATTCTCCATGTCCCCTaGTGTCAGCACGGTGGCCCG +
Preference number: 4 (lower is better)
Translates to: LSLKLSCHEANPQVLDALILHVP*CQHGGP
Trigger: CGGGCCACCGTGCTGACACCAGGGGACATGGAGAAT...AAGAGCATCTAAGACTTGTGGATTAGCCTCATGGCATGAGAGTTTCAGACTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp CTGAGTCTGAAACTCTCATGCCATGAGGCTAATCCACAAGTCTTAGATGCTCTTCACATTCCTTGGTGTTaGGGGGTGCCAGGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: LSLKLSCHEANPQVLDALHIPWC*GVPGGR
Trigger: CCTGCCTCCTGGCACCCCCCAACACCAAGGAATGTG...AAGAGCATCTAAGACTTGTGGATTAGCCTCATGGCATGAGAGTTTCAGACTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp CTGGAGTGCAAACTCCTTAAAGACAGGGACCAGATTCTTCACTTCTGTCATTCCCGGCTGACTTGTTGCTaGTGGCAGACTTCTCCCTGG +
Preference number: 4 (lower is better)
Translates to: LECKLLKDRDQILHFCHSRLTCC*WQTSPW
Trigger: CCAGGGAGAAGTCTGCCACCAGCAACAAGTCAGCCG...GGAATGACAGAAGTGAAGAATCTGGTCCCTGTCTTTAAGGAGTTTGCACTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp AGCTCCCTAAAAATGGCAGGTGGAGAGCCAATGGAACATGAGCTGACACTGGCTCGACTCCACACACGTTaGCATACACATCGAGGATCT +
Preference number: 4 (lower is better)
Translates to: SSLKMAGGEPMEHELTLARLHTR*HTHRGS
Trigger: AGATCCTCGATGTGTATGCCAACGTGTGTGGAGTCG...AGCCAGTGTCAGCTCATGTTCCATTGGCTCTCCACCTGCCATTTTTAGGGAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp AGCAGAGAACAGCCACCCCACTCTTTCGCTGAAAACATTCTGAGGAGGGTGCAACGACTCCACACACGTTaGCATACACATCGAGGATCT +
Preference number: 4 (lower is better)
Translates to: SREQPPHSFAENILRRVQRLHTR*HTHRGS
Trigger: AGATCCTCGATGTGTATGCCAACGTGTGTGGAGTCG...TTGCACCCTCCTCAGAATGTTTTCAGCGAAAGAGTGGGGTGGCTGTTCTCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp TGTAGTGCAGACCACAGGGTTCCCAGGCCAAAGAGTAATGCAGTAAATGAAATTTCAGGATGCAGCATGTaGCTGGGAGGCAGGTGGCAC +
Preference number: 4 (lower is better)
Translates to: CSADHRVPRPKSNAVNEISGCSM*LGGRWH
Trigger: GTGCCACCTGCCTCCCAGCCACATGCTGCATCCTGA...AATTTCATTTACTGCATTACTCTTTGGCCTGGGAACCCTGTGGTCTGCACTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp TGTAGTGCAGACCACAGGGTTCCCAGGCCAAAGAGTAATGCAGTAAATGAAATTCTCCAGAGCCCTCGTTaGCTCCTTGGCTTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: CSADHRVPRPKSNAVNEILQSPR*LLGLSW
Trigger: CCAGGACAAGCCAAGGAGCCAACGAGGGCTCTGGAG...AATTTCATTTACTGCATTACTCTTTGGCCTGGGAACCCTGTGGTCTGCACTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp AGCTCCCTAAAAATGGCAGGTGGAGAGCCAATGGAACATGAGCTGACACTGGCTTTCTTGGCAGTCTTTTaGCACCACTCACAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: SSLKMAGGEPMEHELTLAFLAVF*HHSQLQ
Trigger: CTGGAGCTGTGAGTGGTGCCAAAAGACTGCCAAGAA...AGCCAGTGTCAGCTCATGTTCCATTGGCTCTCCACCTGCCATTTTTAGGGAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp ATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCACTTTCCCTGACTGGCTCAGGCCTTATTTCGTCTaGCTCCTTGAACATCCTAAG +
Preference number: 4 (lower is better)
Translates to: IKPRLSFALQNSTFPDWLRPYFV*LLEHPK
Trigger: CTTAGGATGTTCAAGGAGCCAGACGAAATAAGGCCT...GAGCCAGTCAGGGAAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp CCAATTATAGAATCACTAACTAACATCTCATTGGCAGACGAGAAACTGAGGCAGGCTGCCATAGGTCCCTaGCACACCTGGCTCTCCGGC +
Preference number: 4 (lower is better)
Translates to: PIIESLTNISLADEKLRQAAIGP*HTWLSG
Trigger: GCCGGAGAGCCAGGTGTGCCAGGGACCTATGGCAGC...CTGCCTCAGTTTCTCGTCTGCCAATGAGATGTTAGTTAGTGATTCTATAATTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376651.1
CDS-3UTR CCA 90 bp CCAATTATAGAATCACTAACTAACATCTCATTGGCAGACGAGAAACTGAGGCAGGGTCTCTCCCAGCACTaGAGAGGCTGGAGCGGGCAC +
Preference number: 4 (lower is better)
Translates to: PIIESLTNISLADEKLRQGLSQH*RGWSGH
Trigger: GTGCCCGCTCCAGCCTCTCCAGTGCTGGGAGAGACC...CTGCCTCAGTTTCTCGTCTGCCAATGAGATGTTAGTTAGTGATTCTATAATTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376651.1
CDS-3UTR TCA 90 bp TGTAGTGCAGACCACAGGGTTCCCAGGCCAAAGAGTAATGCAGTAAATGAAATTGTATTCCGCTCGGGCTaGGCACATCAGAGACACCAC +
Preference number: 4 (lower is better)
Translates to: CSADHRVPRPKSNAVNEIVFRSG*AHQRHH
Trigger: GTGGTGTCTCTGATGTGCTCAGCCCGAGCGGAATAC...AATTTCATTTACTGCATTACTCTTTGGCCTGGGAACCCTGTGGTCTGCACTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR TCA 90 bp CTGGAGTGCAAACTCCTTAAAGACAGGGACCAGATTCTTCACTTCTGTCATTCCTGGTGGACATTGCAATaGTCAGGGCAGTGGCCAGGT +
Preference number: 4 (lower is better)
Translates to: LECKLLKDRDQILHFCHSWWTLQ*SGQWPG
Trigger: ACCTGGCCACTGCCCTGATCATTGCAATGTCCACCA...GGAATGACAGAAGTGAAGAATCTGGTCCCTGTCTTTAAGGAGTTTGCACTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR TCA 90 bp CTGGAGTGCAAACTCCTTAAAGACAGGGACCAGATTCTTCACTTCTGTCATTCCGCTTTGAATCCCGGCTaGCTTGTTGCTGGTGGCAGA +
Preference number: 4 (lower is better)
Translates to: LECKLLKDRDQILHFCHSALNPG*LVAGGR
Trigger: TCTGCCACCAGCAACAAGTCAGCCGGGATTCAAAGC...GGAATGACAGAAGTGAAGAATCTGGTCCCTGTCTTTAAGGAGTTTGCACTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR TCA 90 bp CCTAAGACTGAAGTGGAAGGCCATTCACATGTAGTGCAGACCACAGGGTTCCCAGGCTGGCTGTATGAGTaGGTAGATATTTACTCTGCC +
Preference number: 4 (lower is better)
Translates to: PKTEVEGHSHVVQTTGFPGWLYE*VDIYSA
Trigger: GGCAGAGTAAATATCTACTCACTCATACAGCCAGCC...TGGGAACCCTGTGGTCTGCACTACATGTGAATGGCCTTCCACTTCAGTCTTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR TCA 90 bp CCATCCTTCATCATCCCAGTAGGGAGTCATCTCCCGCTTAGAACTTCTATTAACGAACTCCACTTTCCCTaGCTGGCTCAGAAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: PSFIIPVGSHLPLRTSINELHFP*LAQKAE
Trigger: CTCAGCCTTCTGAGCCAGTCAGGGAAAGTGGAGTTC...GTTAATAGAAGTTCTAAGCGGGAGATGACTCCCTACTGGGATGATGAAGGATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp AGCTCCCTAAAAATGGCAGGTGGAGAGCCAATGGAACATGAGCTGACACTGGCTAGTCTTTGTGACGCCTaGATATCTGGTAGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: SSLKMAGGEPMEHELTLASLCDA*ISGSLL
Trigger: AAGGAGGCTACCAGATATGCAGGCGTCACAAAGACT...AGCCAGTGTCAGCTCATGTTCCATTGGCTCTCCACCTGCCATTTTTAGGGAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp CCTAAGACTGAAGTGGAAGGCCATTCACATGTAGTGCAGACCACAGGGTTCCCAAGTCTTTGTGACGCCTaGATATCTGGTAGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: PKTEVEGHSHVVQTTGFPSLCDA*ISGSLL
Trigger: AAGGAGGCTACCAGATATGCAGGCGTCACAAAGACT...TGGGAACCCTGTGGTCTGCACTACATGTGAATGGCCTTCCACTTCAGTCTTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp GCAGACCACAGGGTTCCCAGGCCAAAGAGTAATGCAGTAAATGAAATTGGCTACGCTCTTGGTGGGCTTTaGTGGAGTTGCTGTCAGCTT +
Preference number: 4 (lower is better)
Translates to: ADHRVPRPKSNAVNEIGYALGGL*WSCCQL
Trigger: AAGCTGACAGCAACTCCAGCAAAGCCCACCAAGAGC...GTAGCCAATTTCATTTACTGCATTACTCTTTGGCCTGGGAACCCTGTGGTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp CTCGACATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCACTTTCCCTGACTGTCTTCTACTGGAGTaGAAACTCCTTAAAGACAGG +
Preference number: 4 (lower is better)
Translates to: LDIKPRLSFALQNSTFPDCLLLE*KLLKDR
Trigger: CCTGTCTTTAAGGAGTTTGCACTCCAGTAGAAGACA...GTCAGGGAAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGATGTCGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp CCTAAGACTGAAGTGGAAGGCCATTCACATGTAGTGCAGACCACAGGGTTCCCAGCTTCTTCACTAGGATaGCATCCTTCATCATCCCAG +
Preference number: 4 (lower is better)
Translates to: PKTEVEGHSHVVQTTGFPASSLG*HPSSSQ
Trigger: CTGGGATGATGAAGGATGGCATCCTAGTGAAGAAGC...TGGGAACCCTGTGGTCTGCACTACATGTGAATGGCCTTCCACTTCAGTCTTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp AGAAGCCAGCTCCCTCGACATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCAATGAAATTGGCTACTaGACACATCCAATTGCTTGG +
Preference number: 4 (lower is better)
Translates to: RSQLPRHQAQALICAAELNEIGY*THPIAW
Trigger: CCAAGCAATTGGATGTGTGCAGTAGCCAATTTCATT...GAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGATGTCGAGGGAGCTGGCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp ATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCACTTTCCCTGACTGGCTCAGTCTGAAACTCTCATaGCATGAGGCTAATCCACAA +
Preference number: 4 (lower is better)
Translates to: IKPRLSFALQNSTFPDWLSLKLS*HEANPQ
Trigger: TTGTGGATTAGCCTCATGGCATGAGAGTTTCAGACT...GAGCCAGTCAGGGAAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp GCAGACCACAGGGTTCCCAGGCCAAAGAGTAATGCAGTAAATGAAATTGGCTACGCTCCCTGCCCTGTCTaGAAGTTTGGAAACTCAGTC +
Preference number: 4 (lower is better)
Translates to: ADHRVPRPKSNAVNEIGYAPCPV*KFGNSV
Trigger: GACTGAGTTTCCAAACTTGCAGACAGGGCAGGGAGC...GTAGCCAATTTCATTTACTGCATTACTCTTTGGCCTGGGAACCCTGTGGTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp CTGAGTCTGAAACTCTCATGCCATGAGGCTAATCCACAAGTCTTAGATGCTCTTCTGCAGAGGGCTTGCTaGTCCTCTCAGGCTGGCTAT +
Preference number: 4 (lower is better)
Translates to: LSLKLSCHEANPQVLDALLQRAC*SSQAGY
Trigger: ATAGCCAGCCTGAGAGGAGCAGCAAGCCCTCTGCAG...AAGAGCATCTAAGACTTGTGGATTAGCCTCATGGCATGAGAGTTTCAGACTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409271.5
CDS-3UTR CCA 90 bp GCAGACCACAGGGTTCCCAGGCCAAAGAGTAATGCAGTAAATGAAATTGGCTACGGTACCATCCAGTTCTaGGTGACAGGCTTCACAGGT +
Preference number: 4 (lower is better)
Translates to: ADHRVPRPKSNAVNEIGYGTIQF*VTGFTG
Trigger: ACCTGTGAAGCCTGTCACCCAGAACTGGATGGTACC...GTAGCCAATTTCATTTACTGCATTACTCTTTGGCCTGGGAACCCTGTGGTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp CCATCCTTCATCATCCCAGTAGGGAGTCATCTCCCGCTTAGAACTTCTATTAACCGTAGTCCTCGTCTTTaGTGCCGTAGCCACAGGACA +
Preference number: 4 (lower is better)
Translates to: PSFIIPVGSHLPLRTSINRSPRL*CRSHRT
Trigger: TGTCCTGTGGCTACGGCACCAAAGACGAGGACTACG...GTTAATAGAAGTTCTAAGCGGGAGATGACTCCCTACTGGGATGATGAAGGATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp CTGGAGTGCAAACTCCTTAAAGACAGGGACCAGATTCTTCACTTCTGTCATTCCTCTGGTAGCCTCCTTTaGAAAACTTCTCCGCCGGGC +
Preference number: 4 (lower is better)
Translates to: LECKLLKDRDQILHFCHSSGSLL*KTSPPG
Trigger: GCCCGGCGGAGAAGTTTTCCAAAGGAGGCTACCAGA...GGAATGACAGAAGTGAAGAATCTGGTCCCTGTCTTTAAGGAGTTTGCACTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp CCAATTATAGAATCACTAACTAACATCTCATTGGCAGACGAGAAACTGAGGCAGCTGGTGTCAGCACGGTaGCCCGGAAGAAGCCCTCAC +
Preference number: 4 (lower is better)
Translates to: PIIESLTNISLADEKLRQLVSAR*PGRSPH
Trigger: GTGAGGGCTTCTTCCGGGCCACCGTGCTGACACCAG...CTGCCTCAGTTTCTCGTCTGCCAATGAGATGTTAGTTAGTGATTCTATAATTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp CAAAAATGGCAGGATGGAGTCCCAGCTTTGGTCAGTGAGAATTATTATGATCTCCACATTCCTTGGTGTTaGGGGGTGCCAGGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: QKWQDGVPALVSENYYDLHIPWC*GVPGGR
Trigger: CCTGCCTCCTGGCACCCCCCAACACCAAGGAATGTG...GAGATCATAATAATTCTCACTGACCAAAGCTGGGACTCCATCCTGCCATTTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp CCATCCTTCATCATCCCAGTAGGGAGTCATCTCCCGCTTAGAACTTCTATTAACCCTGAGAGTTCTTTGTaGGCGTGCTGGAAGGGAGAC +
Preference number: 4 (lower is better)
Translates to: PSFIIPVGSHLPLRTSINPESSL*ACWKGD
Trigger: GTCTCCCTTCCAGCACGCCCACAAAGAACTCTCAGG...GTTAATAGAAGTTCTAAGCGGGAGATGACTCCCTACTGGGATGATGAAGGATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp CCATCCTTCATCATCCCAGTAGGGAGTCATCTCCCGCTTAGAACTTCTATTAACCGTTCTCGCTCTTGGTaGGCTTTGCTGGAGTTGCTG +
Preference number: 4 (lower is better)
Translates to: PSFIIPVGSHLPLRTSINRSRSW*ALLELL
Trigger: CAGCAACTCCAGCAAAGCCCACCAAGAGCGAGAACG...GTTAATAGAAGTTCTAAGCGGGAGATGACTCCCTACTGGGATGATGAAGGATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp CTGAGTCTGAAACTCTCATGCCATGAGGCTAATCCACAAGTCTTAGATGCTCTTTGGCAGACTTCTCCCTaGCCAGGTGAACCAGCGACA +
Preference number: 4 (lower is better)
Translates to: LSLKLSCHEANPQVLDALWQTSP*PGEPAT
Trigger: TGTCGCTGGTTCACCTGGCCAGGGAGAAGTCTGCCA...AAGAGCATCTAAGACTTGTGGATTAGCCTCATGGCATGAGAGTTTCAGACTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp ATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCACTTTCCCTGACTGGCTCAAAAGCCTTGATTCTTaGCAGTCTTTTGGCACCACT +
Preference number: 4 (lower is better)
Translates to: IKPRLSFALQNSTFPDWLKSLDS*QSFGTT
Trigger: AGTGGTGCCAAAAGACTGCCAAGAATCAAGGCTTTT...GAGCCAGTCAGGGAAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp CTCGACATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCACTTTCCCTGACACACATCCAATTGCTTaGACAAACACATGCCTTGCA +
Preference number: 4 (lower is better)
Translates to: LDIKPRLSFALQNSTFPDTHPIA*TNTCLA
Trigger: TGCAAGGCATGTGTTTGTCCAAGCAATTGGATGTGT...GTCAGGGAAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGATGTCGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp AGAGAGGAAAAGACAAGGCCCAAGGTGGCACAACTAGAAGCCAGCTCCCTCGACACACATCCAATTGCTTaGACAAACACATGCCTTGCA +
Preference number: 4 (lower is better)
Translates to: REEKTRPKVAQLEASSLDTHPIA*TNTCLA
Trigger: TGCAAGGCATGTGTTTGTCCAAGCAATTGGATGTGT...GTCGAGGGAGCTGGCTTCTAGTTGTGCCACCTTGGGCCTTGTCTTTTCCTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp GCAGACCACAGGGTTCCCAGGCCAAAGAGTAATGCAGTAAATGAAATTGGCTACTCCACTTTCCCTGACTaGCTCAGAAGGCTGAGTCTG +
Preference number: 4 (lower is better)
Translates to: ADHRVPRPKSNAVNEIGYSTFPD*LRRLSL
Trigger: CAGACTCAGCCTTCTGAGCCAGTCAGGGAAAGTGGA...GTAGCCAATTTCATTTACTGCATTACTCTTTGGCCTGGGAACCCTGTGGTCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp AGAATTATGAATATCTCCACACAAAAATGGCAGGATGGAGTCCCAGCTTTGGTCATGGGGGCCGTCACCTaGGGCAGAGGGCTTTGTCTT +
Preference number: 4 (lower is better)
Translates to: RIMNISTQKWQDGVPALVMGAVT*GRGLCL
Trigger: AAGACAAAGCCCTCTGCCCCAGGTGACGGCCCCCAT...GACCAAAGCTGGGACTCCATCCTGCCATTTTTGTGTGGAGATATTCATAATTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp TTATCAAAATGTTTGAGCTGCTTCTTCACTAGGATGCCATCCTTCATCATCCCATCTTCCCCGGGTGGCTaGTGCAACAGGCTGGGGAGA +
Preference number: 4 (lower is better)
Translates to: LSKCLSCFFTRMPSFIIPSSPGG*CNRLGR
Trigger: TCTCCCCAGCCTGTTGCACCAGCCACCCGGGGAAGA...TGGGATGATGAAGGATGGCATCCTAGTGAAGAAGCAGCTCAAACATTTTGATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000376651.1
ENST00000409271.5
CDS-3UTR TCA 90 bp AGGCGAGCATCTGAAAGTATCCCGGCTCTAGTCCTTTATCTTTGGTTAAATTGGTGTAGCCTGCCGTGCTaGTGCGGTCAAAGAGTTGCA +
Preference number: 4 (lower is better)
Translates to: RRASESIPALVLYLWLNWCSLPC*CGQRVA
Trigger: TGCAACTCTTTGACCGCATCAGCACGGCAGGCTACA...CCAATTTAACCAAAGATAAAGGACTAGAGCCGGGATACTTTCAGATGCTCGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR TCA 90 bp CCATCCTTCATCATCCCAGTAGGGAGTCATCTCCCGCTTAGAACTTCTATTAACGTACAGGCGAGCATCTaGAAGTATCCCGGCTCTAGT +
Preference number: 4 (lower is better)
Translates to: PSFIIPVGSHLPLRTSINVQASI*KYPGSS
Trigger: ACTAGAGCCGGGATACTTTCAGATGCTCGCCTGTAC...GTTAATAGAAGTTCTAAGCGGGAGATGACTCCCTACTGGGATGATGAAGGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR TCA 90 bp CTGAGTCTGAAACTCTCATGCCATGAGGCTAATCCACAAGTCTTAGATGCTCTTCAGGGAGTTCAGCAGTaGACTCTAACCCCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: LSLKLSCHEANPQVLDALQGVQQ*TLTPGV
Trigger: CACACCAGGGGTTAGAGTTCACTGCTGAACTCCCTG...AAGAGCATCTAAGACTTGTGGATTAGCCTCATGGCATGAGAGTTTCAGACTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR TCA 90 bp ATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCACTTTCCCTGACTGGCTCAGAATTCTAATAGTGTaGAATGAGGCCAAAGCACCA +
Preference number: 4 (lower is better)
Translates to: IKPRLSFALQNSTFPDWLRILIV*NEAKAP
Trigger: TGGTGCTTTGGCCTCATTTCACACTATTAGAATTCT...GAGCCAGTCAGGGAAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR TCA 90 bp AGAGAGGAAAAGACAAGGCCCAAGGTGGCACAACTAGAAGCCAGCTCCCTCGACAGAATTCTAATAGTGTaGAATGAGGCCAAAGCACCA +
Preference number: 4 (lower is better)
Translates to: REEKTRPKVAQLEASSLDRILIV*NEAKAP
Trigger: TGGTGCTTTGGCCTCATTTCACACTATTAGAATTCT...GTCGAGGGAGCTGGCTTCTAGTTGTGCCACCTTGGGCCTTGTCTTTTCCTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp CTGGAGTGCAAACTCCTTAAAGACAGGGACCAGATTCTTCACTTCTGTCATTCCGCTCTTGGTGGGCTTTaGTGGAGTTGCTGTCAGCTT +
Preference number: 4 (lower is better)
Translates to: LECKLLKDRDQILHFCHSALGGL*WSCCQL
Trigger: AAGCTGACAGCAACTCCAGCAAAGCCCACCAAGAGC...GGAATGACAGAAGTGAAGAATCTGGTCCCTGTCTTTAAGGAGTTTGCACTCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp CAAAAATGGCAGGATGGAGTCCCAGCTTTGGTCAGTGAGAATTATTATGATCTCCTCCGGCTCAGCAGCTaGTCATTCTCGGATGAGGCA +
Preference number: 4 (lower is better)
Translates to: QKWQDGVPALVSENYYDLLRLSS*SFSDEA
Trigger: TGCCTCATCCGAGAATGAGCAGCTGCTGAGCCGGAG...GAGATCATAATAATTCTCACTGACCAAAGCTGGGACTCCATCCTGCCATTTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp AGGCGAGCATCTGAAAGTATCCCGGCTCTAGTCCTTTATCTTTGGTTAAATTGGAGGGATGCTGTAGCCTaGCGTGCTGATGCGGTCAAA +
Preference number: 4 (lower is better)
Translates to: RRASESIPALVLYLWLNWRDAVA*RADAVK
Trigger: TTTGACCGCATCAGCACGGCAGGCTACAGCATCCCT...CCAATTTAACCAAAGATAAAGGACTAGAGCCGGGATACTTTCAGATGCTCGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp ATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCACTTTCCCTGACTGGCTCTCAAAATGTTTGAGCTaGTTCTTCACTAGGATGCCA +
Preference number: 4 (lower is better)
Translates to: IKPRLSFALQNSTFPDWLSKCLS*FFTRMP
Trigger: TGGCATCCTAGTGAAGAAGCAGCTCAAACATTTTGA...GAGCCAGTCAGGGAAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp AGAGAGGAAAAGACAAGGCCCAAGGTGGCACAACTAGAAGCCAGCTCCCTCGACTCAAAATGTTTGAGCTaGTTCTTCACTAGGATGCCA +
Preference number: 4 (lower is better)
Translates to: REEKTRPKVAQLEASSLDSKCLS*FFTRMP
Trigger: TGGCATCCTAGTGAAGAAGCAGCTCAAACATTTTGA...GTCGAGGGAGCTGGCTTCTAGTTGTGCCACCTTGGGCCTTGTCTTTTCCTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp CTCGACATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCACTTTCCCTGACGCTTGGACAAACACATaGCTTGCATATTGGTTTTGT +
Preference number: 4 (lower is better)
Translates to: LDIKPRLSFALQNSTFPDAWTNT*LAYWFC
Trigger: ACAAAACCAATATGCAAGGCATGTGTTTGTCCAAGC...GTCAGGGAAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGATGTCGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp CCATCCTTCATCATCCCAGTAGGGAGTCATCTCCCGCTTAGAACTTCTATTAACGCCCAGGCTCTCATTTaGGCTGCAGAACTCCACTTT +
Preference number: 4 (lower is better)
Translates to: PSFIIPVGSHLPLRTSINAQALI*AAELHF
Trigger: AAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTGGGC...GTTAATAGAAGTTCTAAGCGGGAGATGACTCCCTACTGGGATGATGAAGGATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp ATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCACTTTCCCTGACTGGCTCAGGATAATTAAGCTCTaGCGTGGAGTATTTAGCTTG +
Preference number: 4 (lower is better)
Translates to: IKPRLSFALQNSTFPDWLRIIKL*RGVFSL
Trigger: CAAGCTAAATACTCCACGGCAGAGCTTAATTATCCT...GAGCCAGTCAGGGAAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp AGAAGCCAGCTCCCTCGACATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCATCACAAGTGACATTTaGAGTCTAATTAAGGGGAGA +
Preference number: 4 (lower is better)
Translates to: RSQLPRHQAQALICAAELITSDI*SLIKGR
Trigger: TCTCCCCTTAATTAGACTGCAAATGTCACTTGTGAT...GAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGATGTCGAGGGAGCTGGCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp TGTAGTGCAGACCACAGGGTTCCCAGGCCAAAGAGTAATGCAGTAAATGAAATTAGGTGCCAGGGAAGTTaGCAGAAGCTCCTGAAGTGG +
Preference number: 4 (lower is better)
Translates to: CSADHRVPRPKSNAVNEIRCQGS*QKLLKW
Trigger: CCACTTCAGGAGCTTCTGCCAACTTCCCTGGCACCT...AATTTCATTTACTGCATTACTCTTTGGCCTGGGAACCCTGTGGTCTGCACTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp CTGAGTCTGAAACTCTCATGCCATGAGGCTAATCCACAAGTCTTAGATGCTCTTCCTGAGAGTTCTTTGTaGGCGTGCTGGAAGGGAGAC +
Preference number: 4 (lower is better)
Translates to: LSLKLSCHEANPQVLDALPESSL*ACWKGD
Trigger: GTCTCCCTTCCAGCACGCCCACAAAGAACTCTCAGG...AAGAGCATCTAAGACTTGTGGATTAGCCTCATGGCATGAGAGTTTCAGACTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp TGTAGTGCAGACCACAGGGTTCCCAGGCCAAAGAGTAATGCAGTAAATGAAATTCCTGAGAGTTCTTTGTaGGCGTGCTGGAAGGGAGAC +
Preference number: 4 (lower is better)
Translates to: CSADHRVPRPKSNAVNEIPESSL*ACWKGD
Trigger: GTCTCCCTTCCAGCACGCCCACAAAGAACTCTCAGG...AATTTCATTTACTGCATTACTCTTTGGCCTGGGAACCCTGTGGTCTGCACTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp CCAATTATAGAATCACTAACTAACATCTCATTGGCAGACGAGAAACTGAGGCAGTCGTCCTTGCTCACTTaGGCCTCCACGCTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: PIIESLTNISLADEKLRQSSLLT*ASTLFP
Trigger: GGGGAAGAGCGTGGAGGCCCAAGTGAGCAAGGACGA...CTGCCTCAGTTTCTCGTCTGCCAATGAGATGTTAGTTAGTGATTCTATAATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp TTATCAAAATGTTTGAGCTGCTTCTTCACTAGGATGCCATCCTTCATCATCCCATCGTCCTTGCTCACTTaGGCCTCCACGCTCTTCCCC +
Preference number: 4 (lower is better)
Translates to: LSKCLSCFFTRMPSFIIPSSLLT*ASTLFP
Trigger: GGGGAAGAGCGTGGAGGCCCAAGTGAGCAAGGACGA...TGGGATGATGAAGGATGGCATCCTAGTGAAGAAGCAGCTCAAACATTTTGATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp CTGGAGTGCAAACTCCTTAAAGACAGGGACCAGATTCTTCACTTCTGTCATTCCCTTGGTGGGCTTTGCTaGAGTTGCTGTCAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: LECKLLKDRDQILHFCHSLGGLC*SCCQLL
Trigger: GAGAAGCTGACAGCAACTCCAGCAAAGCCCACCAAG...GGAATGACAGAAGTGAAGAATCTGGTCCCTGTCTTTAAGGAGTTTGCACTCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp CTGAGTCTGAAACTCTCATGCCATGAGGCTAATCCACAAGTCTTAGATGCTCTTCTCGAGGCAATCAAATaGCAGCTCCGTGGGGCTAAG +
Preference number: 4 (lower is better)
Translates to: LSLKLSCHEANPQVLDALLEAIK*QLRGAK
Trigger: CTTAGCCCCACGGAGCTGCCATTTGATTGCCTCGAG...AAGAGCATCTAAGACTTGTGGATTAGCCTCATGGCATGAGAGTTTCAGACTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp CCAATTATAGAATCACTAACTAACATCTCATTGGCAGACGAGAAACTGAGGCAGCCCTCGTTGGCTCCTTaGCTTGTCCTGGGAGGACAG +
Preference number: 4 (lower is better)
Translates to: PIIESLTNISLADEKLRQPSLAP*LVLGGQ
Trigger: CTGTCCTCCCAGGACAAGCCAAGGAGCCAACGAGGG...CTGCCTCAGTTTCTCGTCTGCCAATGAGATGTTAGTTAGTGATTCTATAATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp AGCAGAGAACAGCCACCCCACTCTTTCGCTGAAAACATTCTGAGGAGGGTGCAAAGGCCTTATTTCGTCTaGCTCCTTGAACATCCTAAG +
Preference number: 4 (lower is better)
Translates to: SREQPPHSFAENILRRVQRPYFV*LLEHPK
Trigger: CTTAGGATGTTCAAGGAGCCAGACGAAATAAGGCCT...TTGCACCCTCCTCAGAATGTTTTCAGCGAAAGAGTGGGGTGGCTGTTCTCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp ATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCACTTTCCCTGACTGGCTCATGTACTACATTCGTTaGTGGGAAATTGCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: IKPRLSFALQNSTFPDWLMYYIR*WEIACW
Trigger: CCAACAAGCAATTTCCCACCAACGAATGTAGTACAT...GAGCCAGTCAGGGAAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp GCAGACCACAGGGTTCCCAGGCCAAAGAGTAATGCAGTAAATGAAATTGGCTACCCCTGTCTGCAAGTTTaGAAACTCAGTCCTTGCCGA +
Preference number: 4 (lower is better)
Translates to: ADHRVPRPKSNAVNEIGYPCLQV*KLSPCR
Trigger: TCGGCAAGGACTGAGTTTCCAAACTTGCAGACAGGG...GTAGCCAATTTCATTTACTGCATTACTCTTTGGCCTGGGAACCCTGTGGTCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp CCAATTATAGAATCACTAACTAACATCTCATTGGCAGACGAGAAACTGAGGCAGATGGGGGCCGTCACCTaGGGCAGAGGGCTTTGTCTT +
Preference number: 4 (lower is better)
Translates to: PIIESLTNISLADEKLRQMGAVT*GRGLCL
Trigger: AAGACAAAGCCCTCTGCCCCAGGTGACGGCCCCCAT...CTGCCTCAGTTTCTCGTCTGCCAATGAGATGTTAGTTAGTGATTCTATAATTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp CTGAGTCTGAAACTCTCATGCCATGAGGCTAATCCACAAGTCTTAGATGCTCTTATGGCTCGGATGGTCTaGCTTCTGTTGGAGGTCAGC +
Preference number: 4 (lower is better)
Translates to: LSLKLSCHEANPQVLDALMARMV*LLLEVS
Trigger: GCTGACCTCCAACAGAAGCCAGACCATCCGAGCCAT...AAGAGCATCTAAGACTTGTGGATTAGCCTCATGGCATGAGAGTTTCAGACTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409271.5
CDS-3UTR TCA 90 bp TTATCAAAATGTTTGAGCTGCTTCTTCACTAGGATGCCATCCTTCATCATCCCACAGGTGTCCTTGGCCTaGGAGTTCTTTGTGGGCGTG +
Preference number: 4 (lower is better)
Translates to: LSKCLSCFFTRMPSFIIPQVSLA*EFFVGV
Trigger: CACGCCCACAAAGAACTCTCAGGCCAAGGACACCTG...TGGGATGATGAAGGATGGCATCCTAGTGAAGAAGCAGCTCAAACATTTTGATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR TCA 90 bp TGTAGTGCAGACCACAGGGTTCCCAGGCCAAAGAGTAATGCAGTAAATGAAATTCTGCTCATTCTCGGATaGGGCATCGTTCTCGCTCTT +
Preference number: 4 (lower is better)
Translates to: CSADHRVPRPKSNAVNEILLILG*GIVLAL
Trigger: AAGAGCGAGAACGATGCCTCATCCGAGAATGAGCAG...AATTTCATTTACTGCATTACTCTTTGGCCTGGGAACCCTGTGGTCTGCACTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR TCA 90 bp CAAAAATGGCAGGATGGAGTCCCAGCTTTGGTCAGTGAGAATTATTATGATCTCGCTTTGAATCCCGGCTaGCTTGTTGCTGGTGGCAGA +
Preference number: 4 (lower is better)
Translates to: QKWQDGVPALVSENYYDLALNPG*LVAGGR
Trigger: TCTGCCACCAGCAACAAGTCAGCCGGGATTCAAAGC...GAGATCATAATAATTCTCACTGACCAAAGCTGGGACTCCATCCTGCCATTTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR TCA 90 bp AGGCGAGCATCTGAAAGTATCCCGGCTCTAGTCCTTTATCTTTGGTTAAATTGGGTACAGGCGAGCATCTaGAAGTATCCCGGCTCTAGT +
Preference number: 4 (lower is better)
Translates to: RRASESIPALVLYLWLNWVQASI*KYPGSS
Trigger: ACTAGAGCCGGGATACTTTCAGATGCTCGCCTGTAC...CCAATTTAACCAAAGATAAAGGACTAGAGCCGGGATACTTTCAGATGCTCGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR TCA 90 bp GCAGACCACAGGGTTCCCAGGCCAAAGAGTAATGCAGTAAATGAAATTGGCTACGGTGGGCTGGCTGTATaGGTGAGTAGATATTTACTC +
Preference number: 4 (lower is better)
Translates to: ADHRVPRPKSNAVNEIGYGGLAV*VSRYLL
Trigger: GAGTAAATATCTACTCACTCATACAGCCAGCCCACC...GTAGCCAATTTCATTTACTGCATTACTCTTTGGCCTGGGAACCCTGTGGTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR TCA 90 bp CTCGACATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCACTTTCCCTGACTGGTTTTGTATAGAGTaGGCTCTTCCATTATTGACT +
Preference number: 4 (lower is better)
Translates to: LDIKPRLSFALQNSTFPDWFCIE*ALPLLT
Trigger: AGTCAATAATGGAAGAGCTCACTCTATACAAAACCA...GTCAGGGAAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGATGTCGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR TCA 90 bp AGCAGAGAACAGCCACCCCACTCTTTCGCTGAAAACATTCTGAGGAGGGTGCAAAGAATTATGCGTGGCTaGACTCTTAGGAAGTCATCA +
Preference number: 4 (lower is better)
Translates to: SREQPPHSFAENILRRVQRIMRG*TLRKSS
Trigger: TGATGACTTCCTAAGAGTTCAGCCACGCATAATTCT...TTGCACCCTCCTCAGAATGTTTTCAGCGAAAGAGTGGGGTGGCTGTTCTCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR TCA 90 bp AGAATTATGAATATCTCCACACAAAAATGGCAGGATGGAGTCCCAGCTTTGGTCCAGGGAGTTCAGCAGTaGACTCTAACCCCTGGTGTG +
Preference number: 4 (lower is better)
Translates to: RIMNISTQKWQDGVPALVQGVQQ*TLTPGV
Trigger: CACACCAGGGGTTAGAGTTCACTGCTGAACTCCCTG...GACCAAAGCTGGGACTCCATCCTGCCATTTTTGTGTGGAGATATTCATAATTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR TCA 90 bp TGTAGTGCAGACCACAGGGTTCCCAGGCCAAAGAGTAATGCAGTAAATGAAATTCAATGGAACATGAGCTaGCACTGGCTGGCCTTACAG +
Preference number: 4 (lower is better)
Translates to: CSADHRVPRPKSNAVNEIQWNMS*HWLALQ
Trigger: CTGTAAGGCCAGCCAGTGTCAGCTCATGTTCCATTG...AATTTCATTTACTGCATTACTCTTTGGCCTGGGAACCCTGTGGTCTGCACTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR TCA 90 bp AGAATTATGAATATCTCCACACAAAAATGGCAGGATGGAGTCCCAGCTTTGGTCAGAGCCAATGGAACATaGGCTGACACTGGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: RIMNISTQKWQDGVPALVRANGT*ADTGWP
Trigger: AGGCCAGCCAGTGTCAGCTCATGTTCCATTGGCTCT...GACCAAAGCTGGGACTCCATCCTGCCATTTTTGTGTGGAGATATTCATAATTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp AGAATTATGAATATCTCCACACAAAAATGGCAGGATGGAGTCCCAGCTTTGGTCAGTCCTCGTCTTTGGTaGCGTAGCCACAGGACAGGT +
Preference number: 4 (lower is better)
Translates to: RIMNISTQKWQDGVPALVSPRLW*RSHRTG
Trigger: ACCTGTCCTGTGGCTACGGCACCAAAGACGAGGACT...GACCAAAGCTGGGACTCCATCCTGCCATTTTTGTGTGGAGATATTCATAATTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp CCATCCTTCATCATCCCAGTAGGGAGTCATCTCCCGCTTAGAACTTCTATTAACGAAGATGGTGGACATTaGAATGATCAGGGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: PSFIIPVGSHLPLRTSINEDGGH*NDQGSG
Trigger: GCCACTGCCCTGATCATTGCAATGTCCACCATCTTC...GTTAATAGAAGTTCTAAGCGGGAGATGACTCCCTACTGGGATGATGAAGGATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp CTGGAGTGCAAACTCCTTAAAGACAGGGACCAGATTCTTCACTTCTGTCATTCCGAAGATGGTGGACATTaGAATGATCAGGGCAGTGGC +
Preference number: 4 (lower is better)
Translates to: LECKLLKDRDQILHFCHSEDGGH*NDQGSG
Trigger: GCCACTGCCCTGATCATTGCAATGTCCACCATCTTC...GGAATGACAGAAGTGAAGAATCTGGTCCCTGTCTTTAAGGAGTTTGCACTCCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp TTATCAAAATGTTTGAGCTGCTTCTTCACTAGGATGCCATCCTTCATCATCCCATCCCGGCTGACTTGTTaGTGGTGGCAGACTTCTCCC +
Preference number: 4 (lower is better)
Translates to: LSKCLSCFFTRMPSFIIPSRLTC*WWQTSP
Trigger: GGGAGAAGTCTGCCACCAGCAACAAGTCAGCCGGGA...TGGGATGATGAAGGATGGCATCCTAGTGAAGAAGCAGCTCAAACATTTTGATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp TGTAGTGCAGACCACAGGGTTCCCAGGCCAAAGAGTAATGCAGTAAATGAAATTATGCGGTCAAAGAGTTaGATGCCGTCTGTCATGCCC +
Preference number: 4 (lower is better)
Translates to: CSADHRVPRPKSNAVNEIMRSKS*MPSVMP
Trigger: GGGCATGACAGACGGCATGCAACTCTTTGACCGCAT...AATTTCATTTACTGCATTACTCTTTGGCCTGGGAACCCTGTGGTCTGCACTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp AGAATTATGAATATCTCCACACAAAAATGGCAGGATGGAGTCCCAGCTTTGGTCAGGGATGCTGTAGCCTaGCGTGCTGATGCGGTCAAA +
Preference number: 4 (lower is better)
Translates to: RIMNISTQKWQDGVPALVRDAVA*RADAVK
Trigger: TTTGACCGCATCAGCACGGCAGGCTACAGCATCCCT...GACCAAAGCTGGGACTCCATCCTGCCATTTTTGTGTGGAGATATTCATAATTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp TGTAGTGCAGACCACAGGGTTCCCAGGCCAAAGAGTAATGCAGTAAATGAAATTGACAGCCCACAGGCATaGTTTTCAGGATGCAGCATG +
Preference number: 4 (lower is better)
Translates to: CSADHRVPRPKSNAVNEIDSPQA*FSGCSM
Trigger: CATGCTGCATCCTGAAAAGCATGCCTGTGGGCTGTC...AATTTCATTTACTGCATTACTCTTTGGCCTGGGAACCCTGTGGTCTGCACTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp AGCTCCCTAAAAATGGCAGGTGGAGAGCCAATGGAACATGAGCTGACACTGGCTTGTCTTCTACTGGAGTaGAAACTCCTTAAAGACAGG +
Preference number: 4 (lower is better)
Translates to: SSLKMAGGEPMEHELTLACLLLE*KLLKDR
Trigger: CCTGTCTTTAAGGAGTTTGCACTCCAGTAGAAGACA...AGCCAGTGTCAGCTCATGTTCCATTGGCTCTCCACCTGCCATTTTTAGGGAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp AGCAGAGAACAGCCACCCCACTCTTTCGCTGAAAACATTCTGAGGAGGGTGCAAAGTCTGAAACTCTCATaGCATGAGGCTAATCCACAA +
Preference number: 4 (lower is better)
Translates to: SREQPPHSFAENILRRVQSLKLS*HEANPQ
Trigger: TTGTGGATTAGCCTCATGGCATGAGAGTTTCAGACT...TTGCACCCTCCTCAGAATGTTTTCAGCGAAAGAGTGGGGTGGCTGTTCTCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp CTGAGTCTGAAACTCTCATGCCATGAGGCTAATCCACAAGTCTTAGATGCTCTTGCCCAGGCTCTCATTTaGGCTGCAGAACTCCACTTT +
Preference number: 4 (lower is better)
Translates to: LSLKLSCHEANPQVLDALAQALI*AAELHF
Trigger: AAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTGGGC...AAGAGCATCTAAGACTTGTGGATTAGCCTCATGGCATGAGAGTTTCAGACTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp CTGAGTCTGAAACTCTCATGCCATGAGGCTAATCCACAAGTCTTAGATGCTCTTGGTACCATCCAGTTCTaGGTGACAGGCTTCACAGGT +
Preference number: 4 (lower is better)
Translates to: LSLKLSCHEANPQVLDALGTIQF*VTGFTG
Trigger: ACCTGTGAAGCCTGTCACCCAGAACTGGATGGTACC...AAGAGCATCTAAGACTTGTGGATTAGCCTCATGGCATGAGAGTTTCAGACTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp AGAATTATGAATATCTCCACACAAAAATGGCAGGATGGAGTCCCAGCTTTGGTCCGTAGTCCTCGTCTTTaGTGCCGTAGCCACAGGACA +
Preference number: 4 (lower is better)
Translates to: RIMNISTQKWQDGVPALVRSPRL*CRSHRT
Trigger: TGTCCTGTGGCTACGGCACCAAAGACGAGGACTACG...GACCAAAGCTGGGACTCCATCCTGCCATTTTTGTGTGGAGATATTCATAATTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp AGAATTATGAATATCTCCACACAAAAATGGCAGGATGGAGTCCCAGCTTTGGTCAGGTGCCAGGGAAGTTaGCAGAAGCTCCTGAAGTGG +
Preference number: 4 (lower is better)
Translates to: RIMNISTQKWQDGVPALVRCQGS*QKLLKW
Trigger: CCACTTCAGGAGCTTCTGCCAACTTCCCTGGCACCT...GACCAAAGCTGGGACTCCATCCTGCCATTTTTGTGTGGAGATATTCATAATTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp AGGCGAGCATCTGAAAGTATCCCGGCTCTAGTCCTTTATCTTTGGTTAAATTGGCATCACCACGTTGTCTaGGGCCTCTTTCTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: RRASESIPALVLYLWLNWHHHVV*GLFLLL
Trigger: GAGGAGAAGAAAGAGGCCCCAGACAACGTGGTGATG...CCAATTTAACCAAAGATAAAGGACTAGAGCCGGGATACTTTCAGATGCTCGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp CTGAGTCTGAAACTCTCATGCCATGAGGCTAATCCACAAGTCTTAGATGCTCTTCATCACCACGTTGTCTaGGGCCTCTTTCTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: LSLKLSCHEANPQVLDALHHHVV*GLFLLL
Trigger: GAGGAGAAGAAAGAGGCCCCAGACAACGTGGTGATG...AAGAGCATCTAAGACTTGTGGATTAGCCTCATGGCATGAGAGTTTCAGACTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp AGGCGAGCATCTGAAAGTATCCCGGCTCTAGTCCTTTATCTTTGGTTAAATTGGCTTGGTGGGCTTTGCTaGAGTTGCTGTCAGCTTCTC +
Preference number: 4 (lower is better)
Translates to: RRASESIPALVLYLWLNWLGGLC*SCCQLL
Trigger: GAGAAGCTGACAGCAACTCCAGCAAAGCCCACCAAG...CCAATTTAACCAAAGATAAAGGACTAGAGCCGGGATACTTTCAGATGCTCGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp CAAAAATGGCAGGATGGAGTCCCAGCTTTGGTCAGTGAGAATTATTATGATCTCCTGACTTGTTGCTGGTaGCAGACTTCTCCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: QKWQDGVPALVSENYYDLLTCCW*QTSPWP
Trigger: TGGCCAGGGAGAAGTCTGCCACCAGCAACAAGTCAG...GAGATCATAATAATTCTCACTGACCAAAGCTGGGACTCCATCCTGCCATTTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp AGGCGAGCATCTGAAAGTATCCCGGCTCTAGTCCTTTATCTTTGGTTAAATTGGTTAATGGTGGGCTGGTaGGCTGGCTGTATGAGTGAG +
Preference number: 4 (lower is better)
Translates to: RRASESIPALVLYLWLNWLMVGW*AGCMSE
Trigger: CTCACTCATACAGCCAGCCCACCAGCCCACCATTAA...CCAATTTAACCAAAGATAAAGGACTAGAGCCGGGATACTTTCAGATGCTCGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp CCTAAGACTGAAGTGGAAGGCCATTCACATGTAGTGCAGACCACAGGGTTCCCAACACATCCAATTGCTTaGACAAACACATGCCTTGCA +
Preference number: 4 (lower is better)
Translates to: PKTEVEGHSHVVQTTGFPTHPIA*TNTCLA
Trigger: TGCAAGGCATGTGTTTGTCCAAGCAATTGGATGTGT...TGGGAACCCTGTGGTCTGCACTACATGTGAATGGCCTTCCACTTCAGTCTTAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR TCA 90 bp GCAGACCACAGGGTTCCCAGGCCAAAGAGTAATGCAGTAAATGAAATTGGCTACCAGAAGATGGGTCTATaGAGAAAGTCAGGTACCATC +
Preference number: 4 (lower is better)
Translates to: ADHRVPRPKSNAVNEIGYQKMGL*RKSGTI
Trigger: GATGGTACCTGACTTTCTTCATAGACCCATCTTCTG...GTAGCCAATTTCATTTACTGCATTACTCTTTGGCCTGGGAACCCTGTGGTCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR TCA 90 bp CAAAAATGGCAGGATGGAGTCCCAGCTTTGGTCAGTGAGAATTATTATGATCTCCTGCTCATTCTCGGATaGGGCATCGTTCTCGCTCTT +
Preference number: 4 (lower is better)
Translates to: QKWQDGVPALVSENYYDLLLILG*GIVLAL
Trigger: AAGAGCGAGAACGATGCCTCATCCGAGAATGAGCAG...GAGATCATAATAATTCTCACTGACCAAAGCTGGGACTCCATCCTGCCATTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR TCA 90 bp CCAATTATAGAATCACTAACTAACATCTCATTGGCAGACGAGAAACTGAGGCAGGCTTTGAATCCCGGCTaGCTTGTTGCTGGTGGCAGA +
Preference number: 4 (lower is better)
Translates to: PIIESLTNISLADEKLRQALNPG*LVAGGR
Trigger: TCTGCCACCAGCAACAAGTCAGCCGGGATTCAAAGC...CTGCCTCAGTTTCTCGTCTGCCAATGAGATGTTAGTTAGTGATTCTATAATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR TCA 90 bp CCAATTATAGAATCACTAACTAACATCTCATTGGCAGACGAGAAACTGAGGCAGTGTAGCCTGCCGTGCTaGTGCGGTCAAAGAGTTGCA +
Preference number: 4 (lower is better)
Translates to: PIIESLTNISLADEKLRQCSLPC*CGQRVA
Trigger: TGCAACTCTTTGACCGCATCAGCACGGCAGGCTACA...CTGCCTCAGTTTCTCGTCTGCCAATGAGATGTTAGTTAGTGATTCTATAATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR TCA 90 bp AGAATTATGAATATCTCCACACAAAAATGGCAGGATGGAGTCCCAGCTTTGGTCGTACAGGCGAGCATCTaGAAGTATCCCGGCTCTAGT +
Preference number: 4 (lower is better)
Translates to: RIMNISTQKWQDGVPALVVQASI*KYPGSS
Trigger: ACTAGAGCCGGGATACTTTCAGATGCTCGCCTGTAC...GACCAAAGCTGGGACTCCATCCTGCCATTTTTGTGTGGAGATATTCATAATTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR TCA 90 bp CCATCCTTCATCATCCCAGTAGGGAGTCATCTCCCGCTTAGAACTTCTATTAACTCGCTGAAAACATTCTaGGGAGGGTGCAAGCTGTTA +
Preference number: 4 (lower is better)
Translates to: PSFIIPVGSHLPLRTSINSLKTF*GGCKLL
Trigger: TAACAGCTTGCACCCTCCTCAGAATGTTTTCAGCGA...GTTAATAGAAGTTCTAAGCGGGAGATGACTCCCTACTGGGATGATGAAGGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR TCA 90 bp CTGAGTCTGAAACTCTCATGCCATGAGGCTAATCCACAAGTCTTAGATGCTCTTACCCCACTCTTTCGCTaGAAACATTCTGAGGAGGGT +
Preference number: 4 (lower is better)
Translates to: LSLKLSCHEANPQVLDALTPLFR*KHSEEG
Trigger: ACCCTCCTCAGAATGTTTTCAGCGAAAGAGTGGGGT...AAGAGCATCTAAGACTTGTGGATTAGCCTCATGGCATGAGAGTTTCAGACTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR TCA 90 bp CAAAAATGGCAGGATGGAGTCCCAGCTTTGGTCAGTGAGAATTATTATGATCTCCAATGGAACATGAGCTaGCACTGGCTGGCCTTACAG +
Preference number: 4 (lower is better)
Translates to: QKWQDGVPALVSENYYDLQWNMS*HWLALQ
Trigger: CTGTAAGGCCAGCCAGTGTCAGCTCATGTTCCATTG...GAGATCATAATAATTCTCACTGACCAAAGCTGGGACTCCATCCTGCCATTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR TCA 90 bp TTATCAAAATGTTTGAGCTGCTTCTTCACTAGGATGCCATCCTTCATCATCCCAAGAGCCAATGGAACATaGGCTGACACTGGCTGGCCT +
Preference number: 4 (lower is better)
Translates to: LSKCLSCFFTRMPSFIIPRANGT*ADTGWP
Trigger: AGGCCAGCCAGTGTCAGCTCATGTTCCATTGGCTCT...TGGGATGATGAAGGATGGCATCCTAGTGAAGAAGCAGCTCAAACATTTTGATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp TTATCAAAATGTTTGAGCTGCTTCTTCACTAGGATGCCATCCTTCATCATCCCAAGTCCTCGTCTTTGGTaGCGTAGCCACAGGACAGGT +
Preference number: 4 (lower is better)
Translates to: LSKCLSCFFTRMPSFIIPSPRLW*RSHRTG
Trigger: ACCTGTCCTGTGGCTACGGCACCAAAGACGAGGACT...TGGGATGATGAAGGATGGCATCCTAGTGAAGAAGCAGCTCAAACATTTTGATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp CCAATTATAGAATCACTAACTAACATCTCATTGGCAGACGAGAAACTGAGGCAGAGGGATGCTGTAGCCTaGCGTGCTGATGCGGTCAAA +
Preference number: 4 (lower is better)
Translates to: PIIESLTNISLADEKLRQRDAVA*RADAVK
Trigger: TTTGACCGCATCAGCACGGCAGGCTACAGCATCCCT...CTGCCTCAGTTTCTCGTCTGCCAATGAGATGTTAGTTAGTGATTCTATAATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp CAAAAATGGCAGGATGGAGTCCCAGCTTTGGTCAGTGAGAATTATTATGATCTCCCACTCCAGTATGTCTaGACACAAGGACTCCACAGC +
Preference number: 4 (lower is better)
Translates to: QKWQDGVPALVSENYYDLPLQYV*TQGLHS
Trigger: GCTGTGGAGTCCTTGTGTGCAGACATACTGGAGTGG...GAGATCATAATAATTCTCACTGACCAAAGCTGGGACTCCATCCTGCCATTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp CTGGAGTGCAAACTCCTTAAAGACAGGGACCAGATTCTTCACTTCTGTCATTCCGCTTCTTCACTAGGATaGCATCCTTCATCATCCCAG +
Preference number: 4 (lower is better)
Translates to: LECKLLKDRDQILHFCHSASSLG*HPSSSQ
Trigger: CTGGGATGATGAAGGATGGCATCCTAGTGAAGAAGC...GGAATGACAGAAGTGAAGAATCTGGTCCCTGTCTTTAAGGAGTTTGCACTCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp AGAGAGGAAAAGACAAGGCCCAAGGTGGCACAACTAGAAGCCAGCTCCCTCGACGACAAACACATGCCTTaGATATTGGTTTTGTATAGA +
Preference number: 4 (lower is better)
Translates to: REEKTRPKVAQLEASSLDDKHMP*ILVLYR
Trigger: TCTATACAAAACCAATATGCAAGGCATGTGTTTGTC...GTCGAGGGAGCTGGCTTCTAGTTGTGCCACCTTGGGCCTTGTCTTTTCCTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp AGCTCCCTAAAAATGGCAGGTGGAGAGCCAATGGAACATGAGCTGACACTGGCTGCTTGGACAAACACATaGCTTGCATATTGGTTTTGT +
Preference number: 4 (lower is better)
Translates to: SSLKMAGGEPMEHELTLAAWTNT*LAYWFC
Trigger: ACAAAACCAATATGCAAGGCATGTGTTTGTCCAAGC...AGCCAGTGTCAGCTCATGTTCCATTGGCTCTCCACCTGCCATTTTTAGGGAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp AGAATTATGAATATCTCCACACAAAAATGGCAGGATGGAGTCCCAGCTTTGGTCGGTACCATCCAGTTCTaGGTGACAGGCTTCACAGGT +
Preference number: 4 (lower is better)
Translates to: RIMNISTQKWQDGVPALVGTIQF*VTGFTG
Trigger: ACCTGTGAAGCCTGTCACCCAGAACTGGATGGTACC...GACCAAAGCTGGGACTCCATCCTGCCATTTTTGTGTGGAGATATTCATAATTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp CAAAAATGGCAGGATGGAGTCCCAGCTTTGGTCAGTGAGAATTATTATGATCTCCATCACCACGTTGTCTaGGGCCTCTTTCTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: QKWQDGVPALVSENYYDLHHHVV*GLFLLL
Trigger: GAGGAGAAGAAAGAGGCCCCAGACAACGTGGTGATG...GAGATCATAATAATTCTCACTGACCAAAGCTGGGACTCCATCCTGCCATTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp TTATCAAAATGTTTGAGCTGCTTCTTCACTAGGATGCCATCCTTCATCATCCCACGTTCTCGCTCTTGGTaGGCTTTGCTGGAGTTGCTG +
Preference number: 4 (lower is better)
Translates to: LSKCLSCFFTRMPSFIIPRSRSW*ALLELL
Trigger: CAGCAACTCCAGCAAAGCCCACCAAGAGCGAGAACG...TGGGATGATGAAGGATGGCATCCTAGTGAAGAAGCAGCTCAAACATTTTGATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp CAAAAATGGCAGGATGGAGTCCCAGCTTTGGTCAGTGAGAATTATTATGATCTCCATCGTTCTCGCTCTTaGTGGGCTTTGCTGGAGTTG +
Preference number: 4 (lower is better)
Translates to: QKWQDGVPALVSENYYDLHRSRS*WALLEL
Trigger: CAACTCCAGCAAAGCCCACCAAGAGCGAGAACGATG...GAGATCATAATAATTCTCACTGACCAAAGCTGGGACTCCATCCTGCCATTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp AGGCGAGCATCTGAAAGTATCCCGGCTCTAGTCCTTTATCTTTGGTTAAATTGGCGACTCCACACACGTTaGCATACACATCGAGGATCT +
Preference number: 4 (lower is better)
Translates to: RRASESIPALVLYLWLNWRLHTR*HTHRGS
Trigger: AGATCCTCGATGTGTATGCCAACGTGTGTGGAGTCG...CCAATTTAACCAAAGATAAAGGACTAGAGCCGGGATACTTTCAGATGCTCGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp TTATCAAAATGTTTGAGCTGCTTCTTCACTAGGATGCCATCCTTCATCATCCCACTCGAGGCAATCAAATaGCAGCTCCGTGGGGCTAAG +
Preference number: 4 (lower is better)
Translates to: LSKCLSCFFTRMPSFIIPLEAIK*QLRGAK
Trigger: CTTAGCCCCACGGAGCTGCCATTTGATTGCCTCGAG...TGGGATGATGAAGGATGGCATCCTAGTGAAGAAGCAGCTCAAACATTTTGATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp CTGAGTCTGAAACTCTCATGCCATGAGGCTAATCCACAAGTCTTAGATGCTCTTTTCTTGGCAGTCTTTTaGCACCACTCACAGCTCCAG +
Preference number: 4 (lower is better)
Translates to: LSLKLSCHEANPQVLDALFLAVF*HHSQLQ
Trigger: CTGGAGCTGTGAGTGGTGCCAAAAGACTGCCAAGAA...AAGAGCATCTAAGACTTGTGGATTAGCCTCATGGCATGAGAGTTTCAGACTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp AGAGAGGAAAAGACAAGGCCCAAGGTGGCACAACTAGAAGCCAGCTCCCTCGACTATCTTTGGTTAAATTaGAAGACAGGCCTTATTTCG +
Preference number: 4 (lower is better)
Translates to: REEKTRPKVAQLEASSLDYLWLN*KTGLIS
Trigger: CGAAATAAGGCCTGTCTTCCAATTTAACCAAAGATA...GTCGAGGGAGCTGGCTTCTAGTTGTGCCACCTTGGGCCTTGTCTTTTCCTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp AGAATTATGAATATCTCCACACAAAAATGGCAGGATGGAGTCCCAGCTTTGGTCTTAATGGTGGGCTGGTaGGCTGGCTGTATGAGTGAG +
Preference number: 4 (lower is better)
Translates to: RIMNISTQKWQDGVPALVLMVGW*AGCMSE
Trigger: CTCACTCATACAGCCAGCCCACCAGCCCACCATTAA...GACCAAAGCTGGGACTCCATCCTGCCATTTTTGTGTGGAGATATTCATAATTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp AGAATTATGAATATCTCCACACAAAAATGGCAGGATGGAGTCCCAGCTTTGGTCGAGTTAATGGTGGGCTaGTGGGCTGGCTGTATGAGT +
Preference number: 4 (lower is better)
Translates to: RIMNISTQKWQDGVPALVELMVG*WAGCMS
Trigger: ACTCATACAGCCAGCCCACCAGCCCACCATTAACTC...GACCAAAGCTGGGACTCCATCCTGCCATTTTTGTGTGGAGATATTCATAATTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp CAAAAATGGCAGGATGGAGTCCCAGCTTTGGTCAGTGAGAATTATTATGATCTCTCCACTTTCCCTGACTaGCTCAGAAGGCTGAGTCTG +
Preference number: 4 (lower is better)
Translates to: QKWQDGVPALVSENYYDLSTFPD*LRRLSL
Trigger: CAGACTCAGCCTTCTGAGCCAGTCAGGGAAAGTGGA...GAGATCATAATAATTCTCACTGACCAAAGCTGGGACTCCATCCTGCCATTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp AGCAGAGAACAGCCACCCCACTCTTTCGCTGAAAACATTCTGAGGAGGGTGCAAATGTACTACATTCGTTaGTGGGAAATTGCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: SREQPPHSFAENILRRVQMYYIR*WEIACW
Trigger: CCAACAAGCAATTTCCCACCAACGAATGTAGTACAT...TTGCACCCTCCTCAGAATGTTTTCAGCGAAAGAGTGGGGTGGCTGTTCTCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp AGCAGAGAACAGCCACCCCACTCTTTCGCTGAAAACATTCTGAGGAGGGTGCAAATGGAGTCCCAGCTTTaGTCAGTGAGAATTATTATG +
Preference number: 4 (lower is better)
Translates to: SREQPPHSFAENILRRVQMESQL*SVRIIM
Trigger: CATAATAATTCTCACTGACCAAAGCTGGGACTCCAT...TTGCACCCTCCTCAGAATGTTTTCAGCGAAAGAGTGGGGTGGCTGTTCTCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp TGTAGTGCAGACCACAGGGTTCCCAGGCCAAAGAGTAATGCAGTAAATGAAATTCCCTGTCTGCAAGTTTaGAAACTCAGTCCTTGCCGA +
Preference number: 4 (lower is better)
Translates to: CSADHRVPRPKSNAVNEIPCLQV*KLSPCR
Trigger: TCGGCAAGGACTGAGTTTCCAAACTTGCAGACAGGG...AATTTCATTTACTGCATTACTCTTTGGCCTGGGAACCCTGTGGTCTGCACTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376651.1
ENST00000409271.5
CDS-3UTR TCA 90 bp CAAAAATGGCAGGATGGAGTCCCAGCTTTGGTCAGTGAGAATTATTATGATCTCTCTGCACCAGTTTTGTaGGTAGCTCAGGGATGCTGT +
Preference number: 4 (lower is better)
Translates to: QKWQDGVPALVSENYYDLSAPVL*VAQGCC
Trigger: ACAGCATCCCTGAGCTACTCACAAAACTGGTGCAGA...GAGATCATAATAATTCTCACTGACCAAAGCTGGGACTCCATCCTGCCATTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR TCA 90 bp CTGAGTCTGAAACTCTCATGCCATGAGGCTAATCCACAAGTCTTAGATGCTCTTGGCTGGCTGTATGAGTaGGTAGATATTTACTCTGCC +
Preference number: 4 (lower is better)
Translates to: LSLKLSCHEANPQVLDALGWLYE*VDIYSA
Trigger: GGCAGAGTAAATATCTACTCACTCATACAGCCAGCC...AAGAGCATCTAAGACTTGTGGATTAGCCTCATGGCATGAGAGTTTCAGACTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR TCA 90 bp CTGAGTCTGAAACTCTCATGCCATGAGGCTAATCCACAAGTCTTAGATGCTCTTGGTGGGCTGGCTGTATaGGTGAGTAGATATTTACTC +
Preference number: 4 (lower is better)
Translates to: LSLKLSCHEANPQVLDALGGLAV*VSRYLL
Trigger: GAGTAAATATCTACTCACTCATACAGCCAGCCCACC...AAGAGCATCTAAGACTTGTGGATTAGCCTCATGGCATGAGAGTTTCAGACTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR TCA 90 bp AGCAGAGAACAGCCACCCCACTCTTTCGCTGAAAACATTCTGAGGAGGGTGCAAAGTCTTAGATGCTCTTaGAATCTAGAATTATGCGTG +
Preference number: 4 (lower is better)
Translates to: SREQPPHSFAENILRRVQSLRCS*NLELCV
Trigger: CACGCATAATTCTAGATTTCAAGAGCATCTAAGACT...TTGCACCCTCCTCAGAATGTTTTCAGCGAAAGAGTGGGGTGGCTGTTCTCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR TCA 90 bp GCAGACCACAGGGTTCCCAGGCCAAAGAGTAATGCAGTAAATGAAATTGGCTACTTCAGGACCTCATTATaGTCCTCTCACAGTATGTAC +
Preference number: 4 (lower is better)
Translates to: ADHRVPRPKSNAVNEIGYFRTSL*SSHSMY
Trigger: GTACATACTGTGAGAGGATCATAATGAGGTCCTGAA...GTAGCCAATTTCATTTACTGCATTACTCTTTGGCCTGGGAACCCTGTGGTCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR TCA 90 bp CAAAAATGGCAGGATGGAGTCCCAGCTTTGGTCAGTGAGAATTATTATGATCTCACCCCACTCTTTCGCTaGAAACATTCTGAGGAGGGT +
Preference number: 4 (lower is better)
Translates to: QKWQDGVPALVSENYYDLTPLFR*KHSEEG
Trigger: ACCCTCCTCAGAATGTTTTCAGCGAAAGAGTGGGGT...GAGATCATAATAATTCTCACTGACCAAAGCTGGGACTCCATCCTGCCATTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR TCA 90 bp CTGAGTCTGAAACTCTCATGCCATGAGGCTAATCCACAAGTCTTAGATGCTCTTTCTAATAGTGTGAAATaGGGCCAAAGCACCAGGAGC +
Preference number: 4 (lower is better)
Translates to: LSLKLSCHEANPQVLDALSNSVK*GQSTRS
Trigger: GCTCCTGGTGCTTTGGCCTCATTTCACACTATTAGA...AAGAGCATCTAAGACTTGTGGATTAGCCTCATGGCATGAGAGTTTCAGACTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp CTGAGTCTGAAACTCTCATGCCATGAGGCTAATCCACAAGTCTTAGATGCTCTTAGTCTTTGTGACGCCTaGATATCTGGTAGCCTCCTT +
Preference number: 4 (lower is better)
Translates to: LSLKLSCHEANPQVLDALSLCDA*ISGSLL
Trigger: AAGGAGGCTACCAGATATGCAGGCGTCACAAAGACT...AAGAGCATCTAAGACTTGTGGATTAGCCTCATGGCATGAGAGTTTCAGACTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp CCAATTATAGAATCACTAACTAACATCTCATTGGCAGACGAGAAACTGAGGCAGGGTCAAAGAGTTGCATaGCGTCTGTCATGCCCCCAA +
Preference number: 4 (lower is better)
Translates to: PIIESLTNISLADEKLRQGQRVA*RLSCPQ
Trigger: TTGGGGGCATGACAGACGGCATGCAACTCTTTGACC...CTGCCTCAGTTTCTCGTCTGCCAATGAGATGTTAGTTAGTGATTCTATAATTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp TTATCAAAATGTTTGAGCTGCTTCTTCACTAGGATGCCATCCTTCATCATCCCAATGCGGTCAAAGAGTTaGATGCCGTCTGTCATGCCC +
Preference number: 4 (lower is better)
Translates to: LSKCLSCFFTRMPSFIIPMRSKS*MPSVMP
Trigger: GGGCATGACAGACGGCATGCAACTCTTTGACCGCAT...TGGGATGATGAAGGATGGCATCCTAGTGAAGAAGCAGCTCAAACATTTTGATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp TTATCAAAATGTTTGAGCTGCTTCTTCACTAGGATGCCATCCTTCATCATCCCACCACTCCAGTATGTCTaGACACAAGGACTCCACAGC +
Preference number: 4 (lower is better)
Translates to: LSKCLSCFFTRMPSFIIPPLQYV*TQGLHS
Trigger: GCTGTGGAGTCCTTGTGTGCAGACATACTGGAGTGG...TGGGATGATGAAGGATGGCATCCTAGTGAAGAAGCAGCTCAAACATTTTGATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp CCATCCTTCATCATCCCAGTAGGGAGTCATCTCCCGCTTAGAACTTCTATTAACCACCTGAACCCTACCTaGCCCAATTATAGAATCACT +
Preference number: 4 (lower is better)
Translates to: PSFIIPVGSHLPLRTSINHLNPT*PNYRIT
Trigger: AGTGATTCTATAATTGGGGCAGGTAGGGTTCAGGTG...GTTAATAGAAGTTCTAAGCGGGAGATGACTCCCTACTGGGATGATGAAGGATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp TTATCAAAATGTTTGAGCTGCTTCTTCACTAGGATGCCATCCTTCATCATCCCAGGGGCTTTCCCTCATTaGAAACTCACCTGCACCATC +
Preference number: 4 (lower is better)
Translates to: LSKCLSCFFTRMPSFIIPGAFPH*KLTCTI
Trigger: GATGGTGCAGGTGAGTTTGCAATGAGGGAAAGCCCC...TGGGATGATGAAGGATGGCATCCTAGTGAAGAAGCAGCTCAAACATTTTGATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000376651.1
CDS-3UTR CCA 90 bp AGCAGAGAACAGCCACCCCACTCTTTCGCTGAAAACATTCTGAGGAGGGTGCAACTAGTCCTTTATCTTTaGTTAAATTGGAAGACAGGC +
Preference number: 4 (lower is better)
Translates to: SREQPPHSFAENILRRVQLVLYL*LNWKTG
Trigger: GCCTGTCTTCCAATTTAACCAAAGATAAAGGACTAG...TTGCACCCTCCTCAGAATGTTTTCAGCGAAAGAGTGGGGTGGCTGTTCTCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp TTATCAAAATGTTTGAGCTGCTTCTTCACTAGGATGCCATCCTTCATCATCCCATTAATGGTGGGCTGGTaGGCTGGCTGTATGAGTGAG +
Preference number: 4 (lower is better)
Translates to: LSKCLSCFFTRMPSFIIPLMVGW*AGCMSE
Trigger: CTCACTCATACAGCCAGCCCACCAGCCCACCATTAA...TGGGATGATGAAGGATGGCATCCTAGTGAAGAAGCAGCTCAAACATTTTGATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp CTGGAGTGCAAACTCCTTAAAGACAGGGACCAGATTCTTCACTTCTGTCATTCCTGCAAGCTGTTATCCTaGAATGGCACACTCATCACA +
Preference number: 4 (lower is better)
Translates to: LECKLLKDRDQILHFCHSCKLLS*NGTLIT
Trigger: TGTGATGAGTGTGCCATTCCAGGATAACAGCTTGCA...GGAATGACAGAAGTGAAGAATCTGGTCCCTGTCTTTAAGGAGTTTGCACTCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR TCA 90 bp AGGCGAGCATCTGAAAGTATCCCGGCTCTAGTCCTTTATCTTTGGTTAAATTGGCAGAAGATGGGTCTATaGAGAAAGTCAGGTACCATC +
Preference number: 4 (lower is better)
Translates to: RRASESIPALVLYLWLNWQKMGL*RKSGTI
Trigger: GATGGTACCTGACTTTCTTCATAGACCCATCTTCTG...CCAATTTAACCAAAGATAAAGGACTAGAGCCGGGATACTTTCAGATGCTCGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR TCA 90 bp CTGGAGTGCAAACTCCTTAAAGACAGGGACCAGATTCTTCACTTCTGTCATTCCTTCAGGACCTCATTATaGTCCTCTCACAGTATGTAC +
Preference number: 4 (lower is better)
Translates to: LECKLLKDRDQILHFCHSFRTSL*SSHSMY
Trigger: GTACATACTGTGAGAGGATCATAATGAGGTCCTGAA...GGAATGACAGAAGTGAAGAATCTGGTCCCTGTCTTTAAGGAGTTTGCACTCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR TCA 90 bp CAAAAATGGCAGGATGGAGTCCCAGCTTTGGTCAGTGAGAATTATTATGATCTCTCTAATAGTGTGAAATaGGGCCAAAGCACCAGGAGC +
Preference number: 4 (lower is better)
Translates to: QKWQDGVPALVSENYYDLSNSVK*GQSTRS
Trigger: GCTCCTGGTGCTTTGGCCTCATTTCACACTATTAGA...GAGATCATAATAATTCTCACTGACCAAAGCTGGGACTCCATCCTGCCATTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR TCA 90 bp GCAGACCACAGGGTTCCCAGGCCAAAGAGTAATGCAGTAAATGAAATTGGCTACAGAATTCTAATAGTGTaGAATGAGGCCAAAGCACCA +
Preference number: 4 (lower is better)
Translates to: ADHRVPRPKSNAVNEIGYRILIV*NEAKAP
Trigger: TGGTGCTTTGGCCTCATTTCACACTATTAGAATTCT...GTAGCCAATTTCATTTACTGCATTACTCTTTGGCCTGGGAACCCTGTGGTCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp CCAATTATAGAATCACTAACTAACATCTCATTGGCAGACGAGAAACTGAGGCAGAGGAGTAGCAGACCATaGCATAGATGTTCCTCGGTC +
Preference number: 4 (lower is better)
Translates to: PIIESLTNISLADEKLRQRSSRP*HRCSSV
Trigger: GACCGAGGAACATCTATGGCATGGTCTGCTACTCCT...CTGCCTCAGTTTCTCGTCTGCCAATGAGATGTTAGTTAGTGATTCTATAATTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp CCAATTATAGAATCACTAACTAACATCTCATTGGCAGACGAGAAACTGAGGCAGTCCAGCCGCTCAATCTaGACCAGTTTTGTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: PIIESLTNISLADEKLRQSSRSI*TSFVSS
Trigger: GCTACTCACAAAACTGGTGCAGATTGAGCGGCTGGA...CTGCCTCAGTTTCTCGTCTGCCAATGAGATGTTAGTTAGTGATTCTATAATTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp CTGAGTCTGAAACTCTCATGCCATGAGGCTAATCCACAAGTCTTAGATGCTCTTAGTAGATATTTACTCTaGCTGGTGAGGTACAGGCGA +
Preference number: 4 (lower is better)
Translates to: LSLKLSCHEANPQVLDALSRYLL*LVRYRR
Trigger: TCGCCTGTACCTCACCAGGCAGAGTAAATATCTACT...AAGAGCATCTAAGACTTGTGGATTAGCCTCATGGCATGAGAGTTTCAGACTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp CTGGAGTGCAAACTCCTTAAAGACAGGGACCAGATTCTTCACTTCTGTCATTCCTGTCTTCTACTGGAGTaGAAACTCCTTAAAGACAGG +
Preference number: 4 (lower is better)
Translates to: LECKLLKDRDQILHFCHSCLLLE*KLLKDR
Trigger: CCTGTCTTTAAGGAGTTTGCACTCCAGTAGAAGACA...GGAATGACAGAAGTGAAGAATCTGGTCCCTGTCTTTAAGGAGTTTGCACTCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp GCAGACCACAGGGTTCCCAGGCCAAAGAGTAATGCAGTAAATGAAATTGGCTACGCTTGGACAAACACATaGCTTGCATATTGGTTTTGT +
Preference number: 4 (lower is better)
Translates to: ADHRVPRPKSNAVNEIGYAWTNT*LAYWFC
Trigger: ACAAAACCAATATGCAAGGCATGTGTTTGTCCAAGC...GTAGCCAATTTCATTTACTGCATTACTCTTTGGCCTGGGAACCCTGTGGTCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp TGTAGTGCAGACCACAGGGTTCCCAGGCCAAAGAGTAATGCAGTAAATGAAATTCTGCACACATCCAATTaGTTGGACAAACACATGCCT +
Preference number: 4 (lower is better)
Translates to: CSADHRVPRPKSNAVNEILHTSN*LDKHMP
Trigger: AGGCATGTGTTTGTCCAAGCAATTGGATGTGTGCAG...AATTTCATTTACTGCATTACTCTTTGGCCTGGGAACCCTGTGGTCTGCACTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp TGTAGTGCAGACCACAGGGTTCCCAGGCCAAAGAGTAATGCAGTAAATGAAATTCACCTGAACCCTACCTaGCCCAATTATAGAATCACT +
Preference number: 4 (lower is better)
Translates to: CSADHRVPRPKSNAVNEIHLNPT*PNYRIT
Trigger: AGTGATTCTATAATTGGGGCAGGTAGGGTTCAGGTG...AATTTCATTTACTGCATTACTCTTTGGCCTGGGAACCCTGTGGTCTGCACTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp AGCTCCCTAAAAATGGCAGGTGGAGAGCCAATGGAACATGAGCTGACACTGGCTTATCTTTGGTTAAATTaGAAGACAGGCCTTATTTCG +
Preference number: 4 (lower is better)
Translates to: SSLKMAGGEPMEHELTLAYLWLN*KTGLIS
Trigger: CGAAATAAGGCCTGTCTTCCAATTTAACCAAAGATA...AGCCAGTGTCAGCTCATGTTCCATTGGCTCTCCACCTGCCATTTTTAGGGAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp AGCTCCCTAAAAATGGCAGGTGGAGAGCCAATGGAACATGAGCTGACACTGGCTTTATTCCCATTTAAATaGACAAACCACACTGTGTTG +
Preference number: 4 (lower is better)
Translates to: SSLKMAGGEPMEHELTLALFPFK*TNHTVL
Trigger: CAACACAGTGTGGTTTGTCCATTTAAATGGGAATAA...AGCCAGTGTCAGCTCATGTTCCATTGGCTCTCCACCTGCCATTTTTAGGGAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp GCAGACCACAGGGTTCCCAGGCCAAAGAGTAATGCAGTAAATGAAATTGGCTACTACTACATTCGTTGGTaGGAAATTGCTTGTTGGTGT +
Preference number: 4 (lower is better)
Translates to: ADHRVPRPKSNAVNEIGYYYIRW*EIACWC
Trigger: ACACCAACAAGCAATTTCCCACCAACGAATGTAGTA...GTAGCCAATTTCATTTACTGCATTACTCTTTGGCCTGGGAACCCTGTGGTCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp CTGAGTCTGAAACTCTCATGCCATGAGGCTAATCCACAAGTCTTAGATGCTCTTTGCAAGCTGTTATCCTaGAATGGCACACTCATCACA +
Preference number: 4 (lower is better)
Translates to: LSLKLSCHEANPQVLDALCKLLS*NGTLIT
Trigger: TGTGATGAGTGTGCCATTCCAGGATAACAGCTTGCA...AAGAGCATCTAAGACTTGTGGATTAGCCTCATGGCATGAGAGTTTCAGACTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR TCA 90 bp CAAAAATGGCAGGATGGAGTCCCAGCTTTGGTCAGTGAGAATTATTATGATCTCTTCATTCAGCTTGTTTaGCGTCTTCCAGTGAAGTGG +
Preference number: 4 (lower is better)
Translates to: QKWQDGVPALVSENYYDLFIQLV*RLPVKW
Trigger: CCACTTCACTGGAAGACGTCAAACAAGCTGAATGAA...GAGATCATAATAATTCTCACTGACCAAAGCTGGGACTCCATCCTGCCATTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp TTATCAAAATGTTTGAGCTGCTTCTTCACTAGGATGCCATCCTTCATCATCCCAGCTTCTTCACTAGGATaGCATCCTTCATCATCCCAG +
Preference number: 4 (lower is better)
Translates to: LSKCLSCFFTRMPSFIIPASSLG*HPSSSQ
Trigger: CTGGGATGATGAAGGATGGCATCCTAGTGAAGAAGC...TGGGATGATGAAGGATGGCATCCTAGTGAAGAAGCAGCTCAAACATTTTGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp CCATCCTTCATCATCCCAGTAGGGAGTCATCTCCCGCTTAGAACTTCTATTAACCTAAAAGGTCAAATCTaGCTAAGACTGAAGTGGAAG +
Preference number: 4 (lower is better)
Translates to: PSFIIPVGSHLPLRTSINLKGQI*LRLKWK
Trigger: CTTCCACTTCAGTCTTAGGCAGATTTGACCTTTTAG...GTTAATAGAAGTTCTAAGCGGGAGATGACTCCCTACTGGGATGATGAAGGATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp CTGGAGTGCAAACTCCTTAAAGACAGGGACCAGATTCTTCACTTCTGTCATTCCGTGGAGTATTTAGCTTaGAGGGTAAACCAAATAGGT +
Preference number: 4 (lower is better)
Translates to: LECKLLKDRDQILHFCHSVEYLA*RVNQIG
Trigger: ACCTATTTGGTTTACCCTGCAAGCTAAATACTCCAC...GGAATGACAGAAGTGAAGAATCTGGTCCCTGTCTTTAAGGAGTTTGCACTCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp TGTAGTGCAGACCACAGGGTTCCCAGGCCAAAGAGTAATGCAGTAAATGAAATTCGTCTTCCAGTGAAGTaGTTTGTAAACATACGTTCC +
Preference number: 4 (lower is better)
Translates to: CSADHRVPRPKSNAVNEIRLPVK*FVNIRS
Trigger: GGAACGTATGTTTACAAACCACTTCACTGGAAGACG...AATTTCATTTACTGCATTACTCTTTGGCCTGGGAACCCTGTGGTCTGCACTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR CAA 72 bp AAGTATCCCGGCTCTAGTCCTTTATCTTTGGTTAAATaGGAAGACAGGCCTTATTTCGTCTGGCTCCTTGAA +
Preference number: 4 (lower is better)
Translates to: KYPGSSPLSLVK*EDRPYFVWLLE
Trigger: TTCAAGGAGCCAGACGAAATAAGGCCTGTCTTCCAATTTAACCAAAGATAAAGGACTAGAGCCGGGATACTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR CAA 72 bp GGACCAGATTCTTCACTTCTGTCATTCCCACGGGGTTaGATTCATTTGAGTCCTCAACATTGTCTCATTGTT +
Preference number: 4 (lower is better)
Translates to: GPDSSLLSFPRG*IHLSPQHCLIV
Trigger: AACAATGAGACAATGTTGAGGACTCAAATGAATCAAACCCCGTGGGAATGACAGAAGTGAAGAATCTGGTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR TCA 90 bp CCAATTATAGAATCACTAACTAACATCTCATTGGCAGACGAGAAACTGAGGCAGCAGAAGATGGGTCTATaGAGAAAGTCAGGTACCATC +
Preference number: 4 (lower is better)
Translates to: PIIESLTNISLADEKLRQQKMGL*RKSGTI
Trigger: GATGGTACCTGACTTTCTTCATAGACCCATCTTCTG...CTGCCTCAGTTTCTCGTCTGCCAATGAGATGTTAGTTAGTGATTCTATAATTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR TCA 90 bp TGTAGTGCAGACCACAGGGTTCCCAGGCCAAAGAGTAATGCAGTAAATGAAATTATATCACAAAAGCCTTaGTTCTTGGCAGTCTTTTGG +
Preference number: 4 (lower is better)
Translates to: CSADHRVPRPKSNAVNEIISQKP*FLAVFW
Trigger: CCAAAAGACTGCCAAGAATCAAGGCTTTTGTGATAT...AATTTCATTTACTGCATTACTCTTTGGCCTGGGAACCCTGTGGTCTGCACTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR TCA 90 bp CCAATTATAGAATCACTAACTAACATCTCATTGGCAGACGAGAAACTGAGGCAGTTCATTCAGCTTGTTTaGCGTCTTCCAGTGAAGTGG +
Preference number: 4 (lower is better)
Translates to: PIIESLTNISLADEKLRQFIQLV*RLPVKW
Trigger: CCACTTCACTGGAAGACGTCAAACAAGCTGAATGAA...CTGCCTCAGTTTCTCGTCTGCCAATGAGATGTTAGTTAGTGATTCTATAATTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR TCA 90 bp CTGGAGTGCAAACTCCTTAAAGACAGGGACCAGATTCTTCACTTCTGTCATTCCTGGTTTTGTATAGAGTaGGCTCTTCCATTATTGACT +
Preference number: 4 (lower is better)
Translates to: LECKLLKDRDQILHFCHSWFCIE*ALPLLT
Trigger: AGTCAATAATGGAAGAGCTCACTCTATACAAAACCA...GGAATGACAGAAGTGAAGAATCTGGTCCCTGTCTTTAAGGAGTTTGCACTCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR TCA 90 bp CAAAAATGGCAGGATGGAGTCCCAGCTTTGGTCAGTGAGAATTATTATGATCTCAGAATTATGCGTGGCTaGACTCTTAGGAAGTCATCA +
Preference number: 4 (lower is better)
Translates to: QKWQDGVPALVSENYYDLRIMRG*TLRKSS
Trigger: TGATGACTTCCTAAGAGTTCAGCCACGCATAATTCT...GAGATCATAATAATTCTCACTGACCAAAGCTGGGACTCCATCCTGCCATTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR TCA 90 bp CCATCCTTCATCATCCCAGTAGGGAGTCATCTCCCGCTTAGAACTTCTATTAACAGTCTTAGATGCTCTTaGAATCTAGAATTATGCGTG +
Preference number: 4 (lower is better)
Translates to: PSFIIPVGSHLPLRTSINSLRCS*NLELCV
Trigger: CACGCATAATTCTAGATTTCAAGAGCATCTAAGACT...GTTAATAGAAGTTCTAAGCGGGAGATGACTCCCTACTGGGATGATGAAGGATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp CCAATTATAGAATCACTAACTAACATCTCATTGGCAGACGAGAAACTGAGGCAGAGTAGATATTTACTCTaGCTGGTGAGGTACAGGCGA +
Preference number: 4 (lower is better)
Translates to: PIIESLTNISLADEKLRQSRYLL*LVRYRR
Trigger: TCGCCTGTACCTCACCAGGCAGAGTAAATATCTACT...CTGCCTCAGTTTCTCGTCTGCCAATGAGATGTTAGTTAGTGATTCTATAATTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp TGTAGTGCAGACCACAGGGTTCCCAGGCCAAAGAGTAATGCAGTAAATGAAATTAATGAAATTGGCTACTaGACACATCCAATTGCTTGG +
Preference number: 4 (lower is better)
Translates to: CSADHRVPRPKSNAVNEINEIGY*THPIAW
Trigger: CCAAGCAATTGGATGTGTGCAGTAGCCAATTTCATT...AATTTCATTTACTGCATTACTCTTTGGCCTGGGAACCCTGTGGTCTGCACTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp AGGCGAGCATCTGAAAGTATCCCGGCTCTAGTCCTTTATCTTTGGTTAAATTGGCTAAAAGGTCAAATCTaGCTAAGACTGAAGTGGAAG +
Preference number: 4 (lower is better)
Translates to: RRASESIPALVLYLWLNWLKGQI*LRLKWK
Trigger: CTTCCACTTCAGTCTTAGGCAGATTTGACCTTTTAG...CCAATTTAACCAAAGATAAAGGACTAGAGCCGGGATACTTTCAGATGCTCGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp AGAATTATGAATATCTCCACACAAAAATGGCAGGATGGAGTCCCAGCTTTGGTCAGTCTGAAACTCTCATaGCATGAGGCTAATCCACAA +
Preference number: 4 (lower is better)
Translates to: RIMNISTQKWQDGVPALVSLKLS*HEANPQ
Trigger: TTGTGGATTAGCCTCATGGCATGAGAGTTTCAGACT...GACCAAAGCTGGGACTCCATCCTGCCATTTTTGTGTGGAGATATTCATAATTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp TTATCAAAATGTTTGAGCTGCTTCTTCACTAGGATGCCATCCTTCATCATCCCACACCTGAACCCTACCTaGCCCAATTATAGAATCACT +
Preference number: 4 (lower is better)
Translates to: LSKCLSCFFTRMPSFIIPHLNPT*PNYRIT
Trigger: AGTGATTCTATAATTGGGGCAGGTAGGGTTCAGGTG...TGGGATGATGAAGGATGGCATCCTAGTGAAGAAGCAGCTCAAACATTTTGATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp CCATCCTTCATCATCCCAGTAGGGAGTCATCTCCCGCTTAGAACTTCTATTAACTCGTTGGTGGGAAATTaGTTGTTGGTGTTAAAGATA +
Preference number: 4 (lower is better)
Translates to: PSFIIPVGSHLPLRTSINSLVGN*LLVLKI
Trigger: TATCTTTAACACCAACAAGCAATTTCCCACCAACGA...GTTAATAGAAGTTCTAAGCGGGAGATGACTCCCTACTGGGATGATGAAGGATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp CAAAAATGGCAGGATGGAGTCCCAGCTTTGGTCAGTGAGAATTATTATGATCTCCGTCTTCCAGTGAAGTaGTTTGTAAACATACGTTCC +
Preference number: 4 (lower is better)
Translates to: QKWQDGVPALVSENYYDLRLPVK*FVNIRS
Trigger: GGAACGTATGTTTACAAACCACTTCACTGGAAGACG...GAGATCATAATAATTCTCACTGACCAAAGCTGGGACTCCATCCTGCCATTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp CTGAGTCTGAAACTCTCATGCCATGAGGCTAATCCACAAGTCTTAGATGCTCTTTACTACATTCGTTGGTaGGAAATTGCTTGTTGGTGT +
Preference number: 4 (lower is better)
Translates to: LSLKLSCHEANPQVLDALYYIRW*EIACWC
Trigger: ACACCAACAAGCAATTTCCCACCAACGAATGTAGTA...AAGAGCATCTAAGACTTGTGGATTAGCCTCATGGCATGAGAGTTTCAGACTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp TGTAGTGCAGACCACAGGGTTCCCAGGCCAAAGAGTAATGCAGTAAATGAAATTATGTACTACATTCGTTaGTGGGAAATTGCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: CSADHRVPRPKSNAVNEIMYYIR*WEIACW
Trigger: CCAACAAGCAATTTCCCACCAACGAATGTAGTACAT...AATTTCATTTACTGCATTACTCTTTGGCCTGGGAACCCTGTGGTCTGCACTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp AGGCGAGCATCTGAAAGTATCCCGGCTCTAGTCCTTTATCTTTGGTTAAATTGGATGGAGTCCCAGCTTTaGTCAGTGAGAATTATTATG +
Preference number: 4 (lower is better)
Translates to: RRASESIPALVLYLWLNWMESQL*SVRIIM
Trigger: CATAATAATTCTCACTGACCAAAGCTGGGACTCCAT...CCAATTTAACCAAAGATAAAGGACTAGAGCCGGGATACTTTCAGATGCTCGCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR CAA 72 bp TTAAATTGGAAGACAGGCCTTATTTCGTCTGGCTCCTaGAACATCCTAAGGCATACGGTGACATATCACAAA +
Preference number: 4 (lower is better)
Translates to: LNWKTGLISSGS*NILRHTVTYHK
Trigger: TTTGTGATATGTCACCGTATGCCTTAGGATGTTCAAGGAGCCAGACGAAATAAGGCCTGTCTTCCAATTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR CAA 72 bp ATCTCCACACAAAAATGGCAGGATGGAGTCCCAGCTTaGGTCAGTGAGAATTATTATGATCTCATTGTTCTG +
Preference number: 4 (lower is better)
Translates to: ISTQKWQDGVPA*VSENYYDLIVL
Trigger: CAGAACAATGAGATCATAATAATTCTCACTGACCAAAGCTGGGACTCCATCCTGCCATTTTTGTGTGGAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR TCA 90 bp CCAATTATAGAATCACTAACTAACATCTCATTGGCAGACGAGAAACTGAGGCAGAGAATTATGCGTGGCTaGACTCTTAGGAAGTCATCA +
Preference number: 4 (lower is better)
Translates to: PIIESLTNISLADEKLRQRIMRG*TLRKSS
Trigger: TGATGACTTCCTAAGAGTTCAGCCACGCATAATTCT...CTGCCTCAGTTTCTCGTCTGCCAATGAGATGTTAGTTAGTGATTCTATAATTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp TGTAGTGCAGACCACAGGGTTCCCAGGCCAAAGAGTAATGCAGTAAATGAAATTTCGTTGGTGGGAAATTaGTTGTTGGTGTTAAAGATA +
Preference number: 4 (lower is better)
Translates to: CSADHRVPRPKSNAVNEISLVGN*LLVLKI
Trigger: TATCTTTAACACCAACAAGCAATTTCCCACCAACGA...AATTTCATTTACTGCATTACTCTTTGGCCTGGGAACCCTGTGGTCTGCACTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp CAAAAATGGCAGGATGGAGTCCCAGCTTTGGTCAGTGAGAATTATTATGATCTCGTGGAGTATTTAGCTTaGAGGGTAAACCAAATAGGT +
Preference number: 4 (lower is better)
Translates to: QKWQDGVPALVSENYYDLVEYLA*RVNQIG
Trigger: ACCTATTTGGTTTACCCTGCAAGCTAAATACTCCAC...GAGATCATAATAATTCTCACTGACCAAAGCTGGGACTCCATCCTGCCATTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp AGAATTATGAATATCTCCACACAAAAATGGCAGGATGGAGTCCCAGCTTTGGTCAGGATAATTAAGCTCTaGCGTGGAGTATTTAGCTTG +
Preference number: 4 (lower is better)
Translates to: RIMNISTQKWQDGVPALVRIIKL*RGVFSL
Trigger: CAAGCTAAATACTCCACGGCAGAGCTTAATTATCCT...GACCAAAGCTGGGACTCCATCCTGCCATTTTTGTGTGGAGATATTCATAATTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp CTGAGTCTGAAACTCTCATGCCATGAGGCTAATCCACAAGTCTTAGATGCTCTTATCACAAGTGACATTTaGAGTCTAATTAAGGGGAGA +
Preference number: 4 (lower is better)
Translates to: LSLKLSCHEANPQVLDALITSDI*SLIKGR
Trigger: TCTCCCCTTAATTAGACTGCAAATGTCACTTGTGAT...AAGAGCATCTAAGACTTGTGGATTAGCCTCATGGCATGAGAGTTTCAGACTCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp TTATCAAAATGTTTGAGCTGCTTCTTCACTAGGATGCCATCCTTCATCATCCCAAAAAGCCTTGATTCTTaGCAGTCTTTTGGCACCACT +
Preference number: 4 (lower is better)
Translates to: LSKCLSCFFTRMPSFIIPKSLDS*QSFGTT
Trigger: AGTGGTGCCAAAAGACTGCCAAGAATCAAGGCTTTT...TGGGATGATGAAGGATGGCATCCTAGTGAAGAAGCAGCTCAAACATTTTGATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp CAAAAATGGCAGGATGGAGTCCCAGCTTTGGTCAGTGAGAATTATTATGATCTCATGGAGTCCCAGCTTTaGTCAGTGAGAATTATTATG +
Preference number: 4 (lower is better)
Translates to: QKWQDGVPALVSENYYDLMESQL*SVRIIM
Trigger: CATAATAATTCTCACTGACCAAAGCTGGGACTCCAT...GAGATCATAATAATTCTCACTGACCAAAGCTGGGACTCCATCCTGCCATTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp TTATCAAAATGTTTGAGCTGCTTCTTCACTAGGATGCCATCCTTCATCATCCCATCAAAATGTTTGAGCTaGTTCTTCACTAGGATGCCA +
Preference number: 4 (lower is better)
Translates to: LSKCLSCFFTRMPSFIIPSKCLS*FFTRMP
Trigger: TGGCATCCTAGTGAAGAAGCAGCTCAAACATTTTGA...TGGGATGATGAAGGATGGCATCCTAGTGAAGAAGCAGCTCAAACATTTTGATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp CCAATTATAGAATCACTAACTAACATCTCATTGGCAGACGAGAAACTGAGGCAGCTAAAAGGTCAAATCTaGCTAAGACTGAAGTGGAAG +
Preference number: 4 (lower is better)
Translates to: PIIESLTNISLADEKLRQLKGQI*LRLKWK
Trigger: CTTCCACTTCAGTCTTAGGCAGATTTGACCTTTTAG...CTGCCTCAGTTTCTCGTCTGCCAATGAGATGTTAGTTAGTGATTCTATAATTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp CAAAAATGGCAGGATGGAGTCCCAGCTTTGGTCAGTGAGAATTATTATGATCTCTCGTTGGTGGGAAATTaGTTGTTGGTGTTAAAGATA +
Preference number: 4 (lower is better)
Translates to: QKWQDGVPALVSENYYDLSLVGN*LLVLKI
Trigger: TATCTTTAACACCAACAAGCAATTTCCCACCAACGA...GAGATCATAATAATTCTCACTGACCAAAGCTGGGACTCCATCCTGCCATTTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp CCAATTATAGAATCACTAACTAACATCTCATTGGCAGACGAGAAACTGAGGCAGGTGGAGTATTTAGCTTaGAGGGTAAACCAAATAGGT +
Preference number: 4 (lower is better)
Translates to: PIIESLTNISLADEKLRQVEYLA*RVNQIG
Trigger: ACCTATTTGGTTTACCCTGCAAGCTAAATACTCCAC...CTGCCTCAGTTTCTCGTCTGCCAATGAGATGTTAGTTAGTGATTCTATAATTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp AGAATTATGAATATCTCCACACAAAAATGGCAGGATGGAGTCCCAGCTTTGGTCATCACAAGTGACATTTaGAGTCTAATTAAGGGGAGA +
Preference number: 4 (lower is better)
Translates to: RIMNISTQKWQDGVPALVITSDI*SLIKGR
Trigger: TCTCCCCTTAATTAGACTGCAAATGTCACTTGTGAT...GACCAAAGCTGGGACTCCATCCTGCCATTTTTGTGTGGAGATATTCATAATTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp AGGCGAGCATCTGAAAGTATCCCGGCTCTAGTCCTTTATCTTTGGTTAAATTGGTTATTCCCATTTAAATaGACAAACCACACTGTGTTG +
Preference number: 4 (lower is better)
Translates to: RRASESIPALVLYLWLNWLFPFK*TNHTVL
Trigger: CAACACAGTGTGGTTTGTCCATTTAAATGGGAATAA...CCAATTTAACCAAAGATAAAGGACTAGAGCCGGGATACTTTCAGATGCTCGCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp CTGAGTCTGAAACTCTCATGCCATGAGGCTAATCCACAAGTCTTAGATGCTCTTTTATTCCCATTTAAATaGACAAACCACACTGTGTTG +
Preference number: 4 (lower is better)
Translates to: LSLKLSCHEANPQVLDALLFPFK*TNHTVL
Trigger: CAACACAGTGTGGTTTGTCCATTTAAATGGGAATAA...AAGAGCATCTAAGACTTGTGGATTAGCCTCATGGCATGAGAGTTTCAGACTCAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp CCAATTATAGAATCACTAACTAACATCTCATTGGCAGACGAGAAACTGAGGCAGTACTACATTCGTTGGTaGGAAATTGCTTGTTGGTGT +
Preference number: 4 (lower is better)
Translates to: PIIESLTNISLADEKLRQYYIRW*EIACWC
Trigger: ACACCAACAAGCAATTTCCCACCAACGAATGTAGTA...CTGCCTCAGTTTCTCGTCTGCCAATGAGATGTTAGTTAGTGATTCTATAATTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
3UTR CAA 72 bp AAAAGGATAATTAAGCTCTGCCGTGGAGTATTTAGCTaGCAGGGTAAACCAAATAGGTTCGAAAAACAGCAG +
Preference number: 4 (lower is better)
Translates to: KRIIKLCRGVFS*QGKPNRFEKQQ
Trigger: CTGCTGTTTTTCGAACCTATTTGGTTTACCCTGCAAGCTAAATACTCCACGGCAGAGCTTAATTATCCTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR TCA 90 bp TTATCAAAATGTTTGAGCTGCTTCTTCACTAGGATGCCATCCTTCATCATCCCATGGTTTTGTATAGAGTaGGCTCTTCCATTATTGACT +
Preference number: 4 (lower is better)
Translates to: LSKCLSCFFTRMPSFIIPWFCIE*ALPLLT
Trigger: AGTCAATAATGGAAGAGCTCACTCTATACAAAACCA...TGGGATGATGAAGGATGGCATCCTAGTGAAGAAGCAGCTCAAACATTTTGATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp CAAAAATGGCAGGATGGAGTCCCAGCTTTGGTCAGTGAGAATTATTATGATCTCGACAAACACATGCCTTaGATATTGGTTTTGTATAGA +
Preference number: 4 (lower is better)
Translates to: QKWQDGVPALVSENYYDLDKHMP*ILVLYR
Trigger: TCTATACAAAACCAATATGCAAGGCATGTGTTTGTC...GAGATCATAATAATTCTCACTGACCAAAGCTGGGACTCCATCCTGCCATTTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR GCA 90 bp CCAATTATAGAATCACTAACTAACATCTCATTGGCAGACGAGAAACTGAGGCAGGACAAACACATGCCTTaGATATTGGTTTTGTATAGA +
Preference number: 4 (lower is better)
Translates to: PIIESLTNISLADEKLRQDKHMP*ILVLYR
Trigger: TCTATACAAAACCAATATGCAAGGCATGTGTTTGTC...CTGCCTCAGTTTCTCGTCTGCCAATGAGATGTTAGTTAGTGATTCTATAATTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CCA 90 bp CCAATTATAGAATCACTAACTAACATCTCATTGGCAGACGAGAAACTGAGGCAGTATCTTTGGTTAAATTaGAAGACAGGCCTTATTTCG +
Preference number: 4 (lower is better)
Translates to: PIIESLTNISLADEKLRQYLWLN*KTGLIS
Trigger: CGAAATAAGGCCTGTCTTCCAATTTAACCAAAGATA...CTGCCTCAGTTTCTCGTCTGCCAATGAGATGTTAGTTAGTGATTCTATAATTGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS GCA 90 bp GGTCTCTCCCAGCACTGGAGAGGCTGGAGCGGGCACGTTCAGCCCTaGTGCCATAGGTCCCTGGCACACCTGGCTCTCCGGCCGTCTGCC +
Preference number: 5 (lower is better)
Translates to: GLSQHWRGWSGHVQP*CHRSLAHLALRPSA
Trigger: GGCAGACGGCCGGAGAGCCAGGTGTGCCAGGGACCTATGGCAGCAGGGCTGAACGTGCCCGCTCCAGCCTCTCCAGTGCTGGGAGAGACC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000376651.1
CDS CCA 90 bp GGCTTTGAATCCCGGCTGACTTGTTGCTGGTGGCAGACTTCTCCCTaGCCAGGTGAACCAGCGACAGCAGGCACAGCTCCGGGGAGCCCT +
Preference number: 5 (lower is better)
Translates to: GFESRLTCCWWQTSP*PGEPATAGTAPGSP
Trigger: AGGGCTCCCCGGAGCTGTGCCTGCTGTCGCTGGTTCACCTGGCCAGGGAGAAGTCTGCCACCAGCAACAAGTCAGCCGGGATTCAAAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS CCA 90 bp GCCAGGGAGGCAAGGGCCACACTCAGCGTCATTCTCCATGTCCCCTaGTGTCAGCACGGTGGCCCGGAAGAAGCCCTCACAGTCTTTGTG +
Preference number: 5 (lower is better)
Translates to: AREARATLSVILHVP*CQHGGPEEALTVFV
Trigger: CACAAAGACTGTGAGGGCTTCTTCCGGGCCACCGTGCTGACACCAGGGGACATGGAGAATGACGCTGAGTGTGGCCCTTGCCTCCCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS CCA 90 bp GGGAGGACAGCCCACAGGCATGCTTTTCAGGATGCAGCATGTGGCTaGGAGGCAGGTGGCACAACCCCCGCCCACTCCAGTATGTCTGCA +
Preference number: 5 (lower is better)
Translates to: GRTAHRHAFQDAACG*EAGGTTPAHSSMSA
Trigger: TGCAGACATACTGGAGTGGGCGGGGGTTGTGCCACCTGCCTCCCAGCCACATGCTGCATCCTGAAAAGCATGCCTGTGGGCTGTCCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS CCA 90 bp TCCTGGGAGGACAGCCCACAGGCATGCTTTTCAGGATGCAGCATGTaGCTGGGAGGCAGGTGGCACAACCCCCGCCCACTCCAGTATGTC +
Preference number: 5 (lower is better)
Translates to: SWEDSPQACFSGCSM*LGGRWHNPRPLQYV
Trigger: GACATACTGGAGTGGGCGGGGGTTGTGCCACCTGCCTCCCAGCCACATGCTGCATCCTGAAAAGCATGCCTGTGGGCTGTCCTCCCAGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS GCA 90 bp TCAGGGGCGGGCTCCTCATCACTGTCGACGCTCCGGCTCAGCAGCTaGTCATTCTCGGATGAGGCATCGTTCTCGCTCTTGGTGGGCTTT +
Preference number: 5 (lower is better)
Translates to: SGAGSSSLSTLRLSS*SFSDEASFSLLVGF
Trigger: AAAGCCCACCAAGAGCGAGAACGATGCCTCATCCGAGAATGAGCAGCTGCTGAGCCGGAGCGTCGACAGTGATGAGGAGCCCGCCCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS GCA 90 bp CCTCGTTGGCTCCTTGGCTTGTCCTGGGAGGACAGCCCACAGGCATaGTTTTCAGGATGCAGCATGTGGCTGGGAGGCAGGTGGCACAAC +
Preference number: 5 (lower is better)
Translates to: PRWLLGLSWEDSPQA*FSGCSMWLGGRWHN
Trigger: GTTGTGCCACCTGCCTCCCAGCCACATGCTGCATCCTGAAAAGCATGCCTGTGGGCTGTCCTCCCAGGACAAGCCAAGGAGCCAACGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS CCA 90 bp GCTGGAAGGGAGACAGGGTGCTGCTGCCCGAGGTGCCAGGGAAGTTaGCAGAAGCTCCTGAAGTGGCTCCCACACATTCCTTGGTGTTGG +
Preference number: 5 (lower is better)
Translates to: AGRETGCCCPRCQGS*QKLLKWLPHIPWCW
Trigger: CCAACACCAAGGAATGTGTGGGAGCCACTTCAGGAGCTTCTGCCAACTTCCCTGGCACCTCGGGCAGCAGCACCCTGTCTCCCTTCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS CCA 90 bp CGGAGAGTCCAGGAAGCAGGGCACCGGCGCATGGGGGCCGTCACCTaGGGCAGAGGGCTTTGTCTTCAGGATGTAGAACATGATGATGAG +
Preference number: 5 (lower is better)
Translates to: RRVQEAGHRRMGAVT*GRGLCLQDVEHDDE
Trigger: CTCATCATCATGTTCTACATCCTGAAGACAAAGCCCTCTGCCCCAGGTGACGGCCCCCATGCGCCGGTGCCCTGCTTCCTGGACTCTCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376651.1
ENST00000409271.5
CDS GCA 90 bp AGAACATCACCACGTTGTCTGGGGCCTCTTTCTTCTCCTCGTCCTTaGTCACTTGGGCCTCCACGCTCTTCCCCGGGTGGCTGGTGCAAC +
Preference number: 5 (lower is better)
Translates to: RTSPRCLGPLSSPRP*SLGPPRSSPGGWCN
Trigger: GTTGCACCAGCCACCCGGGGAAGAGCGTGGAGGCCCAAGTGAGCAAGGACGAGGAGAAGAAAGAGGCCCCAGACAACGTGGTGATGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS CCA 90 bp CCACAGGCATGCTTTTCAGGATGCAGCATGTGGCTGGGAGGCAGGTaGCACAACCCCCGCCCACTCCAGTATGTCTGCACACAAGGACTC +
Preference number: 5 (lower is better)
Translates to: PQACFSGCSMWLGGR*HNPRPLQYVCTQGL
Trigger: GAGTCCTTGTGTGCAGACATACTGGAGTGGGCGGGGGTTGTGCCACCTGCCTCCCAGCCACATGCTGCATCCTGAAAAGCATGCCTGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS CCA 90 bp CACCACTCACAGCTCCAGAGCCCTCGTTGGCTCCTTGGCTTGTCCTaGGAGGACAGCCCACAGGCATGCTTTTCAGGATGCAGCATGTGG +
Preference number: 5 (lower is better)
Translates to: HHSQLQSPRWLLGLS*EDSPQACFSGCSMW
Trigger: CCACATGCTGCATCCTGAAAAGCATGCCTGTGGGCTGTCCTCCCAGGACAAGCCAAGGAGCCAACGAGGGCTCTGGAGCTGTGAGTGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp AGAAGCCAGCTCCCTCGACATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCGTTGGCTCCTTGGCTaGTCCTGGGAGGACAGCCCA +
Preference number: 5 (lower is better)
Translates to: RSQLPRHQAQALICAAELRWLLG*SWEDSP
Trigger: TGGGCTGTCCTCCCAGGACAAGCCAAGGAGCCAACG...GAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGATGTCGAGGGAGCTGGCTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp AGAAGCCAGCTCCCTCGACATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCGCTCCAGAGCCCTCGTaGGCTCCTTGGCTTGTCCTG +
Preference number: 5 (lower is better)
Translates to: RSQLPRHQAQALICAAELAPEPS*APWLVL
Trigger: CAGGACAAGCCAAGGAGCCAACGAGGGCTCTGGAGC...GAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGATGTCGAGGGAGCTGGCTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS GCA 90 bp TCAGCACGGTGGCCCGGAAGAAGCCCTCACAGTCTTTGTGACGCCTaGATATCTGGTAGCCTCCTTTGGAAAACTTCTCCGCCGGGCAGG +
Preference number: 5 (lower is better)
Translates to: SARWPGRSPHSLCDA*ISGSLLWKTSPPGR
Trigger: CCTGCCCGGCGGAGAAGTTTTCCAAAGGAGGCTACCAGATATGCAGGCGTCACAAAGACTGTGAGGGCTTCTTCCGGGCCACCGTGCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS CCA 90 bp AGGTACCATCCAGTTCTGGGTGACAGGCTTCACAGGTGGCCACCGTaGCAGCCCTCTCAGAAGCAGGTACTCTATGTCCTTAGGGGCCAG +
Preference number: 5 (lower is better)
Translates to: RYHPVLGDRLHRWPP*QPSQKQVLYVLRGQ
Trigger: CTGGCCCCTAAGGACATAGAGTACCTGCTTCTGAGAGGGCTGCCACGGTGGCCACCTGTGAAGCCTGTCACCCAGAACTGGATGGTACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS CCA 90 bp AGCCCTCACAGTCTTTGTGACGCCTGCATATCTGGTAGCCTCCTTTaGAAAACTTCTCCGCCGGGCAGGGGACGCAGCCGTAGTCCTCGT +
Preference number: 5 (lower is better)
Translates to: SPHSLCDACISGSLL*KTSPPGRGRSRSPR
Trigger: ACGAGGACTACGGCTGCGTCCCCTGCCCGGCGGAGAAGTTTTCCAAAGGAGGCTACCAGATATGCAGGCGTCACAAAGACTGTGAGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS CCA 90 bp GGCCACACTCAGCGTCATTCTCCATGTCCCCTGGTGTCAGCACGGTaGCCCGGAAGAAGCCCTCACAGTCTTTGTGACGCCTGCATATCT +
Preference number: 5 (lower is better)
Translates to: GHTQRHSPCPLVSAR*PGRSPHSLCDACIS
Trigger: AGATATGCAGGCGTCACAAAGACTGTGAGGGCTTCTTCCGGGCCACCGTGCTGACACCAGGGGACATGGAGAATGACGCTGAGTGTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp ATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCACTTTCCCTGACTGGCTCCGTTGGCTCCTTGGCTaGTCCTGGGAGGACAGCCCA +
Preference number: 5 (lower is better)
Translates to: IKPRLSFALQNSTFPDWLRWLLG*SWEDSP
Trigger: TGGGCTGTCCTCCCAGGACAAGCCAAGGAGCCAACG...GAGCCAGTCAGGGAAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp CTCGACATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCACTTTCCCTGACGCCCTCGTTGGCTCCTaGGCTTGTCCTGGGAGGACA +
Preference number: 5 (lower is better)
Translates to: LDIKPRLSFALQNSTFPDALVGS*ACPGRT
Trigger: TGTCCTCCCAGGACAAGCCAAGGAGCCAACGAGGGC...GTCAGGGAAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGATGTCGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp CTCGACATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCACTTTCCCTGACGCTCCAGAGCCCTCGTaGGCTCCTTGGCTTGTCCTG +
Preference number: 5 (lower is better)
Translates to: LDIKPRLSFALQNSTFPDAPEPS*APWLVL
Trigger: CAGGACAAGCCAAGGAGCCAACGAGGGCTCTGGAGC...GTCAGGGAAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGATGTCGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS TCA 90 bp GCTATTGTAGGTAATGCAGAAGGTGCCCACATGGGTGGTGGAGGCTaGGCCTCCCAGGATGGCTCGGATGGTCTGGCTTCTGTTGGAGGT +
Preference number: 5 (lower is better)
Translates to: AIVGNAEGAHMGGGG*ASQDGSDGLASVGG
Trigger: ACCTCCAACAGAAGCCAGACCATCCGAGCCATCCTGGGAGGCTCAGCCTCCACCACCCATGTGGGCACCTTCTGCATTACCTACAATAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409271.5
CDS CCA 90 bp ATGCCCCCAATCTCATCCCTCTTCAGGCCGAAGCTCTCGGCGAGGTaGCGCCACGTTTTCACAACAGCCTTCTCAGAGTTGTACGTGGAG +
Preference number: 5 (lower is better)
Translates to: MPPISSLFRPKLSAR*RHVFTTAFSELYVE
Trigger: CTCCACGTACAACTCTGAGAAGGCTGTTGTGAAAACGTGGCGCCACCTCGCCGAGAGCTTCGGCCTGAAGAGGGATGAGATTGGGGGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp AGCTCCCTAAAAATGGCAGGTGGAGAGCCAATGGAACATGAGCTGACACTGGCTCCCGGGAACTCTTCCTaGACCGCTCCCTGCCCTGTC +
Preference number: 5 (lower is better)
Translates to: SSLKMAGGEPMEHELTLAPGNSS*TAPCPV
Trigger: GACAGGGCAGGGAGCGGTCAAGGAAGAGTTCCCGGG...AGCCAGTGTCAGCTCATGTTCCATTGGCTCTCCACCTGCCATTTTTAGGGAGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp AGAAGCCAGCTCCCTCGACATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCGTTCTCACCGCAGTTaGAGTATTCCGCTCGGGCTG +
Preference number: 5 (lower is better)
Translates to: RSQLPRHQAQALICAAELRSHRS*SIPLGL
Trigger: CAGCCCGAGCGGAATACTCAAACTGCGGTGAGAACG...GAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGATGTCGAGGGAGCTGGCTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp AGAAGCCAGCTCCCTCGACATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCGCTCTTGGTGGGCTTaGCTGGAGTTGCTGTCAGCT +
Preference number: 5 (lower is better)
Translates to: RSQLPRHQAQALICAAELRSWWA*LELLSA
Trigger: AGCTGACAGCAACTCCAGCAAAGCCCACCAAGAGCG...GAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGATGTCGAGGGAGCTGGCTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS TCA 90 bp GCCCCGCTTCCTTTCCGTTTAAAGGGCTTCCCGGGAACTCTTCCTTaGCCGCTCCCTGCCCTGTCTGCAAGTTTGGAAACTCAGTCCTTG +
Preference number: 5 (lower is better)
Translates to: APLPFRLKGFPGTLP*PLPALSASLETQSL
Trigger: CAAGGACTGAGTTTCCAAACTTGCAGACAGGGCAGGGAGCGGTCAAGGAAGAGTTCCCGGGAAGCCCTTTAAACGGAAAGGAAGCGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp ATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCACTTTCCCTGACTGGCTCGAGGTGCCAGGGAAGTaGGCAGAAGCTCCTGAAGTG +
Preference number: 5 (lower is better)
Translates to: IKPRLSFALQNSTFPDWLEVPGK*AEAPEV
Trigger: CACTTCAGGAGCTTCTGCCAACTTCCCTGGCACCTC...GAGCCAGTCAGGGAAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp AGAGAGGAAAAGACAAGGCCCAAGGTGGCACAACTAGAAGCCAGCTCCCTCGACTTCTTCTCCTCGTCCTaGCTCACTTGGGCCTCCACG +
Preference number: 5 (lower is better)
Translates to: REEKTRPKVAQLEASSLDFFSSS*LTWAST
Trigger: CGTGGAGGCCCAAGTGAGCAAGGACGAGGAGAAGAA...GTCGAGGGAGCTGGCTTCTAGTTGTGCCACCTTGGGCCTTGTCTTTTCCTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp ATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCACTTTCCCTGACTGGCTCTTCTTCTCCTCGTCCTaGCTCACTTGGGCCTCCACG +
Preference number: 5 (lower is better)
Translates to: IKPRLSFALQNSTFPDWLFFSSS*LTWAST
Trigger: CGTGGAGGCCCAAGTGAGCAAGGACGAGGAGAAGAA...GAGCCAGTCAGGGAAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp CTCGACATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCACTTTCCCTGACTTCTTCTCCTCGTCCTaGCTCACTTGGGCCTCCACG +
Preference number: 5 (lower is better)
Translates to: LDIKPRLSFALQNSTFPDFFSSS*LTWAST
Trigger: CGTGGAGGCCCAAGTGAGCAAGGACGAGGAGAAGAA...GTCAGGGAAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGATGTCGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp AGAGAGGAAAAGACAAGGCCCAAGGTGGCACAACTAGAAGCCAGCTCCCTCGACATCCCGGCTGACTTGTaGCTGGTGGCAGACTTCTCC +
Preference number: 5 (lower is better)
Translates to: REEKTRPKVAQLEASSLDIPADL*LVADFS
Trigger: GGAGAAGTCTGCCACCAGCAACAAGTCAGCCGGGAT...GTCGAGGGAGCTGGCTTCTAGTTGTGCCACCTTGGGCCTTGTCTTTTCCTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp AGAAGCCAGCTCCCTCGACATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCTTGGAAACTCAGTCCTaGCCGAGGGGCTTTCCCTCA +
Preference number: 5 (lower is better)
Translates to: RSQLPRHQAQALICAAELLETQS*PRGFPS
Trigger: TGAGGGAAAGCCCCTCGGCAAGGACTGAGTTTCCAA...GAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGATGTCGAGGGAGCTGGCTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376651.1
ENST00000409271.5
CDS CCA 90 bp GTACGTGGAGCTGAGCATTCGGCTAGTCTTCTCGAGGCAATCAAATaGCAGCTCCGTGGGGCTAAGACCTTCCACGACTCCACACACGTT +
Preference number: 5 (lower is better)
Translates to: VRGAEHSASLLEAIK*QLRGAKTFHDSTHV
Trigger: AACGTGTGTGGAGTCGTGGAAGGTCTTAGCCCCACGGAGCTGCCATTTGATTGCCTCGAGAAGACTAGCCGAATGCTCAGCTCCACGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp ATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCACTTTCCCTGACTGGCTCGCATCGTTCTCGCTCTaGGTGGGCTTTGCTGGAGTT +
Preference number: 5 (lower is better)
Translates to: IKPRLSFALQNSTFPDWLASFSL*VGFAGV
Trigger: AACTCCAGCAAAGCCCACCAAGAGCGAGAACGATGC...GAGCCAGTCAGGGAAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp ATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCACTTTCCCTGACTGGCTCGATGCGGTCAAAGAGTaGCATGCCGTCTGTCATGCC +
Preference number: 5 (lower is better)
Translates to: IKPRLSFALQNSTFPDWLDAVKE*HAVCHA
Trigger: GGCATGACAGACGGCATGCAACTCTTTGACCGCATC...GAGCCAGTCAGGGAAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS CCA 90 bp AAGAAAGTCAGGTACCATCCAGTTCTGGGTGACAGGCTTCACAGGTaGCCACCGTGGCAGCCCTCTCAGAAGCAGGTACTCTATGTCCTT +
Preference number: 5 (lower is better)
Translates to: KKVRYHPVLGDRLHR*PPWQPSQKQVLYVL
Trigger: AAGGACATAGAGTACCTGCTTCTGAGAGGGCTGCCACGGTGGCCACCTGTGAAGCCTGTCACCCAGAACTGGATGGTACCTGACTTTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp CTGGAGTGCAAACTCCTTAAAGACAGGGACCAGATTCTTCACTTCTGTCATTCCCCCGGGAACTCTTCCTaGACCGCTCCCTGCCCTGTC +
Preference number: 5 (lower is better)
Translates to: LECKLLKDRDQILHFCHSPGNSS*TAPCPV
Trigger: GACAGGGCAGGGAGCGGTCAAGGAAGAGTTCCCGGG...GGAATGACAGAAGTGAAGAATCTGGTCCCTGTCTTTAAGGAGTTTGCACTCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp AGCAGAGAACAGCCACCCCACTCTTTCGCTGAAAACATTCTGAGGAGGGTGCAACTCACCTGGCTTCTGTaGGAGGTCAGCTTCAGTCCC +
Preference number: 5 (lower is better)
Translates to: SREQPPHSFAENILRRVQLTWLL*EVSFSP
Trigger: GGGACTGAAGCTGACCTCCAACAGAAGCCAGGTGAG...TTGCACCCTCCTCAGAATGTTTTCAGCGAAAGAGTGGGGTGGCTGTTCTCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000258443.7
ENST00000376651.1
CDS-3UTR CAA 90 bp CCTAAGACTGAAGTGGAAGGCCATTCACATGTAGTGCAGACCACAGGGTTCCCAGAGGTGCCAGGGAAGTaGGCAGAAGCTCCTGAAGTG +
Preference number: 5 (lower is better)
Translates to: PKTEVEGHSHVVQTTGFPEVPGK*AEAPEV
Trigger: CACTTCAGGAGCTTCTGCCAACTTCCCTGGCACCTC...TGGGAACCCTGTGGTCTGCACTACATGTGAATGGCCTTCCACTTCAGTCTTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp AGAGAGGAAAAGACAAGGCCCAAGGTGGCACAACTAGAAGCCAGCTCCCTCGACCTGGGGCAGAGGGCTTaGTCTTCAGGATGTAGAACA +
Preference number: 5 (lower is better)
Translates to: REEKTRPKVAQLEASSLDLGQRA*SSGCRT
Trigger: TGTTCTACATCCTGAAGACAAAGCCCTCTGCCCCAG...GTCGAGGGAGCTGGCTTCTAGTTGTGCCACCTTGGGCCTTGTCTTTTCCTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp CTCGACATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCACTTTCCCTGACGAGAACATCACCACGTaGTCTGGGGCCTCTTTCTTC +
Preference number: 5 (lower is better)
Translates to: LDIKPRLSFALQNSTFPDENITT*SGASFF
Trigger: GAAGAAAGAGGCCCCAGACAACGTGGTGATGTTCTC...GTCAGGGAAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGATGTCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp ATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCACTTTCCCTGACTGGCTCGAGAACATCACCACGTaGTCTGGGGCCTCTTTCTTC +
Preference number: 5 (lower is better)
Translates to: IKPRLSFALQNSTFPDWLENITT*SGASFF
Trigger: GAAGAAAGAGGCCCCAGACAACGTGGTGATGTTCTC...GAGCCAGTCAGGGAAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp CCTAAGACTGAAGTGGAAGGCCATTCACATGTAGTGCAGACCACAGGGTTCCCAATCCCGGCTGACTTGTaGCTGGTGGCAGACTTCTCC +
Preference number: 5 (lower is better)
Translates to: PKTEVEGHSHVVQTTGFPIPADL*LVADFS
Trigger: GGAGAAGTCTGCCACCAGCAACAAGTCAGCCGGGAT...TGGGAACCCTGTGGTCTGCACTACATGTGAATGGCCTTCCACTTCAGTCTTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp GCAGACCACAGGGTTCCCAGGCCAAAGAGTAATGCAGTAAATGAAATTGGCTACGCCCTCGTTGGCTCCTaGGCTTGTCCTGGGAGGACA +
Preference number: 5 (lower is better)
Translates to: ADHRVPRPKSNAVNEIGYALVGS*ACPGRT
Trigger: TGTCCTCCCAGGACAAGCCAAGGAGCCAACGAGGGC...GTAGCCAATTTCATTTACTGCATTACTCTTTGGCCTGGGAACCCTGTGGTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp GCAGACCACAGGGTTCCCAGGCCAAAGAGTAATGCAGTAAATGAAATTGGCTACCTCCGACAGGGGGAGTaGACGGAGAGTCCAGGAAGC +
Preference number: 5 (lower is better)
Translates to: ADHRVPRPKSNAVNEIGYLRQGE*TESPGS
Trigger: GCTTCCTGGACTCTCCGTCAACTCCCCCTGTCGGAG...GTAGCCAATTTCATTTACTGCATTACTCTTTGGCCTGGGAACCCTGTGGTCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp CTGGAGTGCAAACTCCTTAAAGACAGGGACCAGATTCTTCACTTCTGTCATTCCCTCGTCCTTGCTCACTaGGGCCTCCACGCTCTTCCC +
Preference number: 5 (lower is better)
Translates to: LECKLLKDRDQILHFCHSLVLAH*GLHALP
Trigger: GGGAAGAGCGTGGAGGCCCAAGTGAGCAAGGACGAG...GGAATGACAGAAGTGAAGAATCTGGTCCCTGTCTTTAAGGAGTTTGCACTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp AGCTCCCTAAAAATGGCAGGTGGAGAGCCAATGGAACATGAGCTGACACTGGCTGATGCGGTCAAAGAGTaGCATGCCGTCTGTCATGCC +
Preference number: 5 (lower is better)
Translates to: SSLKMAGGEPMEHELTLADAVKE*HAVCHA
Trigger: GGCATGACAGACGGCATGCAACTCTTTGACCGCATC...AGCCAGTGTCAGCTCATGTTCCATTGGCTCTCCACCTGCCATTTTTAGGGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp CCATCCTTCATCATCCCAGTAGGGAGTCATCTCCCGCTTAGAACTTCTATTAACCGTTGGCTCCTTGGCTaGTCCTGGGAGGACAGCCCA +
Preference number: 5 (lower is better)
Translates to: PSFIIPVGSHLPLRTSINRWLLG*SWEDSP
Trigger: TGGGCTGTCCTCCCAGGACAAGCCAAGGAGCCAACG...GTTAATAGAAGTTCTAAGCGGGAGATGACTCCCTACTGGGATGATGAAGGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp AGAAGCCAGCTCCCTCGACATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCACAAACCACACTGTGTaGACTTCCATAGAGCACCTC +
Preference number: 5 (lower is better)
Translates to: RSQLPRHQAQALICAAELTNHTV*TSIEHL
Trigger: GAGGTGCTCTATGGAAGTCAACACAGTGTGGTTTGT...GAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGATGTCGAGGGAGCTGGCTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp CCTAAGACTGAAGTGGAAGGCCATTCACATGTAGTGCAGACCACAGGGTTCCCATTGGAAACTCAGTCCTaGCCGAGGGGCTTTCCCTCA +
Preference number: 5 (lower is better)
Translates to: PKTEVEGHSHVVQTTGFPLETQS*PRGFPS
Trigger: TGAGGGAAAGCCCCTCGGCAAGGACTGAGTTTCCAA...TGGGAACCCTGTGGTCTGCACTACATGTGAATGGCCTTCCACTTCAGTCTTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp CCATCCTTCATCATCCCAGTAGGGAGTCATCTCCCGCTTAGAACTTCTATTAACCTCCGACAGGGGGAGTaGACGGAGAGTCCAGGAAGC +
Preference number: 5 (lower is better)
Translates to: PSFIIPVGSHLPLRTSINLRQGE*TESPGS
Trigger: GCTTCCTGGACTCTCCGTCAACTCCCCCTGTCGGAG...GTTAATAGAAGTTCTAAGCGGGAGATGACTCCCTACTGGGATGATGAAGGATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp CAAAAATGGCAGGATGGAGTCCCAGCTTTGGTCAGTGAGAATTATTATGATCTCCCCGGGAACTCTTCCTaGACCGCTCCCTGCCCTGTC +
Preference number: 5 (lower is better)
Translates to: QKWQDGVPALVSENYYDLPGNSS*TAPCPV
Trigger: GACAGGGCAGGGAGCGGTCAAGGAAGAGTTCCCGGG...GAGATCATAATAATTCTCACTGACCAAAGCTGGGACTCCATCCTGCCATTTTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp GCAGACCACAGGGTTCCCAGGCCAAAGAGTAATGCAGTAAATGAAATTGGCTACCTCACCTGGCTTCTGTaGGAGGTCAGCTTCAGTCCC +
Preference number: 5 (lower is better)
Translates to: ADHRVPRPKSNAVNEIGYLTWLL*EVSFSP
Trigger: GGGACTGAAGCTGACCTCCAACAGAAGCCAGGTGAG...GTAGCCAATTTCATTTACTGCATTACTCTTTGGCCTGGGAACCCTGTGGTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258443.7
ENST00000376651.1
CDS-3UTR CAA 90 bp GCAGACCACAGGGTTCCCAGGCCAAAGAGTAATGCAGTAAATGAAATTGGCTACCGTTCTCACCGCAGTTaGAGTATTCCGCTCGGGCTG +
Preference number: 5 (lower is better)
Translates to: ADHRVPRPKSNAVNEIGYRSHRS*SIPLGL
Trigger: CAGCCCGAGCGGAATACTCAAACTGCGGTGAGAACG...GTAGCCAATTTCATTTACTGCATTACTCTTTGGCCTGGGAACCCTGTGGTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp CTGAGTCTGAAACTCTCATGCCATGAGGCTAATCCACAAGTCTTAGATGCTCTTCTCGTCCTTGCTCACTaGGGCCTCCACGCTCTTCCC +
Preference number: 5 (lower is better)
Translates to: LSLKLSCHEANPQVLDALLVLAH*GLHALP
Trigger: GGGAAGAGCGTGGAGGCCCAAGTGAGCAAGGACGAG...AAGAGCATCTAAGACTTGTGGATTAGCCTCATGGCATGAGAGTTTCAGACTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp CTCGACATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCACTTTCCCTGACTGGGCTTTGCTGGAGTaGCTGTCAGCTTCTCAAATT +
Preference number: 5 (lower is better)
Translates to: LDIKPRLSFALQNSTFPDWALLE*LSASQI
Trigger: AATTTGAGAAGCTGACAGCAACTCCAGCAAAGCCCA...GTCAGGGAAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGATGTCGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp GCAGACCACAGGGTTCCCAGGCCAAAGAGTAATGCAGTAAATGAAATTGGCTACCGCTCTTGGTGGGCTTaGCTGGAGTTGCTGTCAGCT +
Preference number: 5 (lower is better)
Translates to: ADHRVPRPKSNAVNEIGYRSWWA*LELLSA
Trigger: AGCTGACAGCAACTCCAGCAAAGCCCACCAAGAGCG...GTAGCCAATTTCATTTACTGCATTACTCTTTGGCCTGGGAACCCTGTGGTCTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp AGCTCCCTAAAAATGGCAGGTGGAGAGCCAATGGAACATGAGCTGACACTGGCTACGACTCCACACACGTaGGCATACACATCGAGGATC +
Preference number: 5 (lower is better)
Translates to: SSLKMAGGEPMEHELTLATTPHT*AYTSRI
Trigger: GATCCTCGATGTGTATGCCAACGTGTGTGGAGTCGT...AGCCAGTGTCAGCTCATGTTCCATTGGCTCTCCACCTGCCATTTTTAGGGAGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp ATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCACTTTCCCTGACTGGCTCATTTCGTCTGGCTCCTaGAACATCCTAAGGCATACG +
Preference number: 5 (lower is better)
Translates to: IKPRLSFALQNSTFPDWLISSGS*NILRHT
Trigger: CGTATGCCTTAGGATGTTCAAGGAGCCAGACGAAAT...GAGCCAGTCAGGGAAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp ATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCACTTTCCCTGACTGGCTCACTGCACACATCCAATaGCTTGGACAAACACATGCC +
Preference number: 5 (lower is better)
Translates to: IKPRLSFALQNSTFPDWLTAHIQ*LGQTHA
Trigger: GGCATGTGTTTGTCCAAGCAATTGGATGTGTGCAGT...GAGCCAGTCAGGGAAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp AGAGAGGAAAAGACAAGGCCCAAGGTGGCACAACTAGAAGCCAGCTCCCTCGACACTGCACACATCCAATaGCTTGGACAAACACATGCC +
Preference number: 5 (lower is better)
Translates to: REEKTRPKVAQLEASSLDTAHIQ*LGQTHA
Trigger: GGCATGTGTTTGTCCAAGCAATTGGATGTGTGCAGT...GTCGAGGGAGCTGGCTTCTAGTTGTGCCACCTTGGGCCTTGTCTTTTCCTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS TCA 90 bp GCTTCTGTTGGAGGTCAGCTTCAGTCCCAGCAGAAGATGGGTCTATaGAGAAAGTCAGGTACCATCCAGTTCTGGGTGACAGGCTTCACA +
Preference number: 5 (lower is better)
Translates to: ASVGGQLQSQQKMGL*RKSGTIQFWVTGFT
Trigger: TGTGAAGCCTGTCACCCAGAACTGGATGGTACCTGACTTTCTTCATAGACCCATCTTCTGCTGGGACTGAAGCTGACCTCCAACAGAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp CTGGAGTGCAAACTCCTTAAAGACAGGGACCAGATTCTTCACTTCTGTCATTCCCGTTCTCACCGCAGTTaGAGTATTCCGCTCGGGCTG +
Preference number: 5 (lower is better)
Translates to: LECKLLKDRDQILHFCHSRSHRS*SIPLGL
Trigger: CAGCCCGAGCGGAATACTCAAACTGCGGTGAGAACG...GGAATGACAGAAGTGAAGAATCTGGTCCCTGTCTTTAAGGAGTTTGCACTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp AGCTCCCTAAAAATGGCAGGTGGAGAGCCAATGGAACATGAGCTGACACTGGCTACAGCCTTCTCAGAGTaGTACGTGGAGCTGAGCATT +
Preference number: 5 (lower is better)
Translates to: SSLKMAGGEPMEHELTLATAFSE*YVELSI
Trigger: AATGCTCAGCTCCACGTACAACTCTGAGAAGGCTGT...AGCCAGTGTCAGCTCATGTTCCATTGGCTCTCCACCTGCCATTTTTAGGGAGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp ATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCACTTTCCCTGACTGGCTCCTAACTAACATCTCATaGGCAGACGAGAAACTGAGG +
Preference number: 5 (lower is better)
Translates to: IKPRLSFALQNSTFPDWLLTNIS*ADEKLR
Trigger: CCTCAGTTTCTCGTCTGCCAATGAGATGTTAGTTAG...GAGCCAGTCAGGGAAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp CTGAGTCTGAAACTCTCATGCCATGAGGCTAATCCACAAGTCTTAGATGCTCTTGAGGTGCCAGGGAAGTaGGCAGAAGCTCCTGAAGTG +
Preference number: 5 (lower is better)
Translates to: LSLKLSCHEANPQVLDALEVPGK*AEAPEV
Trigger: CACTTCAGGAGCTTCTGCCAACTTCCCTGGCACCTC...AAGAGCATCTAAGACTTGTGGATTAGCCTCATGGCATGAGAGTTTCAGACTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp CTGAGTCTGAAACTCTCATGCCATGAGGCTAATCCACAAGTCTTAGATGCTCTTTGGCCTGAGAGTTCTTaGTGGGCGTGCTGGAAGGGA +
Preference number: 5 (lower is better)
Translates to: LSLKLSCHEANPQVLDALWPESS*WACWKG
Trigger: TCCCTTCCAGCACGCCCACAAAGAACTCTCAGGCCA...AAGAGCATCTAAGACTTGTGGATTAGCCTCATGGCATGAGAGTTTCAGACTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp CCAATTATAGAATCACTAACTAACATCTCATTGGCAGACGAGAAACTGAGGCAGCTCGTCCTTGCTCACTaGGGCCTCCACGCTCTTCCC +
Preference number: 5 (lower is better)
Translates to: PIIESLTNISLADEKLRQLVLAH*GLHALP
Trigger: GGGAAGAGCGTGGAGGCCCAAGTGAGCAAGGACGAG...CTGCCTCAGTTTCTCGTCTGCCAATGAGATGTTAGTTAGTGATTCTATAATTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp AGCAGAGAACAGCCACCCCACTCTTTCGCTGAAAACATTCTGAGGAGGGTGCAATGGGCTTTGCTGGAGTaGCTGTCAGCTTCTCAAATT +
Preference number: 5 (lower is better)
Translates to: SREQPPHSFAENILRRVQWALLE*LSASQI
Trigger: AATTTGAGAAGCTGACAGCAACTCCAGCAAAGCCCA...TTGCACCCTCCTCAGAATGTTTTCAGCGAAAGAGTGGGGTGGCTGTTCTCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp CCATCCTTCATCATCCCAGTAGGGAGTCATCTCCCGCTTAGAACTTCTATTAACGCATCGTTCTCGCTCTaGGTGGGCTTTGCTGGAGTT +
Preference number: 5 (lower is better)
Translates to: PSFIIPVGSHLPLRTSINASFSL*VGFAGV
Trigger: AACTCCAGCAAAGCCCACCAAGAGCGAGAACGATGC...GTTAATAGAAGTTCTAAGCGGGAGATGACTCCCTACTGGGATGATGAAGGATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp CTGGAGTGCAAACTCCTTAAAGACAGGGACCAGATTCTTCACTTCTGTCATTCCGCATCGTTCTCGCTCTaGGTGGGCTTTGCTGGAGTT +
Preference number: 5 (lower is better)
Translates to: LECKLLKDRDQILHFCHSASFSL*VGFAGV
Trigger: AACTCCAGCAAAGCCCACCAAGAGCGAGAACGATGC...GGAATGACAGAAGTGAAGAATCTGGTCCCTGTCTTTAAGGAGTTTGCACTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp CTGGAGTGCAAACTCCTTAAAGACAGGGACCAGATTCTTCACTTCTGTCATTCCGATGCGGTCAAAGAGTaGCATGCCGTCTGTCATGCC +
Preference number: 5 (lower is better)
Translates to: LECKLLKDRDQILHFCHSDAVKE*HAVCHA
Trigger: GGCATGACAGACGGCATGCAACTCTTTGACCGCATC...GGAATGACAGAAGTGAAGAATCTGGTCCCTGTCTTTAAGGAGTTTGCACTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp TTATCAAAATGTTTGAGCTGCTTCTTCACTAGGATGCCATCCTTCATCATCCCAGCTCCAGAGCCCTCGTaGGCTCCTTGGCTTGTCCTG +
Preference number: 5 (lower is better)
Translates to: LSKCLSCFFTRMPSFIIPAPEPS*APWLVL
Trigger: CAGGACAAGCCAAGGAGCCAACGAGGGCTCTGGAGC...TGGGATGATGAAGGATGGCATCCTAGTGAAGAAGCAGCTCAAACATTTTGATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp AGCTCCCTAAAAATGGCAGGTGGAGAGCCAATGGAACATGAGCTGACACTGGCTATTTCGTCTGGCTCCTaGAACATCCTAAGGCATACG +
Preference number: 5 (lower is better)
Translates to: SSLKMAGGEPMEHELTLAISSGS*NILRHT
Trigger: CGTATGCCTTAGGATGTTCAAGGAGCCAGACGAAAT...AGCCAGTGTCAGCTCATGTTCCATTGGCTCTCCACCTGCCATTTTTAGGGAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp CCTAAGACTGAAGTGGAAGGCCATTCACATGTAGTGCAGACCACAGGGTTCCCAACAAACCACACTGTGTaGACTTCCATAGAGCACCTC +
Preference number: 5 (lower is better)
Translates to: PKTEVEGHSHVVQTTGFPTNHTV*TSIEHL
Trigger: GAGGTGCTCTATGGAAGTCAACACAGTGTGGTTTGT...TGGGAACCCTGTGGTCTGCACTACATGTGAATGGCCTTCCACTTCAGTCTTAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp CTCGACATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCACTTTCCCTGACGATGGAGTCCCAGCTTaGGTCAGTGAGAATTATTAT +
Preference number: 5 (lower is better)
Translates to: LDIKPRLSFALQNSTFPDDGVPA*VSENYY
Trigger: ATAATAATTCTCACTGACCAAAGCTGGGACTCCATC...GTCAGGGAAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGATGTCGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp CTGGAGTGCAAACTCCTTAAAGACAGGGACCAGATTCTTCACTTCTGTCATTCCGCCCTGTCTGCAAGTTaGGAAACTCAGTCCTTGCCG +
Preference number: 5 (lower is better)
Translates to: LECKLLKDRDQILHFCHSALSAS*ETQSLP
Trigger: CGGCAAGGACTGAGTTTCCAAACTTGCAGACAGGGC...GGAATGACAGAAGTGAAGAATCTGGTCCCTGTCTTTAAGGAGTTTGCACTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp AGAATTATGAATATCTCCACACAAAAATGGCAGGATGGAGTCCCAGCTTTGGTCTGGCCTGAGAGTTCTTaGTGGGCGTGCTGGAAGGGA +
Preference number: 5 (lower is better)
Translates to: RIMNISTQKWQDGVPALVWPESS*WACWKG
Trigger: TCCCTTCCAGCACGCCCACAAAGAACTCTCAGGCCA...GACCAAAGCTGGGACTCCATCCTGCCATTTTTGTGTGGAGATATTCATAATTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp CTGGAGTGCAAACTCCTTAAAGACAGGGACCAGATTCTTCACTTCTGTCATTCCCTGGGGCAGAGGGCTTaGTCTTCAGGATGTAGAACA +
Preference number: 5 (lower is better)
Translates to: LECKLLKDRDQILHFCHSLGQRA*SSGCRT
Trigger: TGTTCTACATCCTGAAGACAAAGCCCTCTGCCCCAG...GGAATGACAGAAGTGAAGAATCTGGTCCCTGTCTTTAAGGAGTTTGCACTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp CAAAAATGGCAGGATGGAGTCCCAGCTTTGGTCAGTGAGAATTATTATGATCTCATCCCGGCTGACTTGTaGCTGGTGGCAGACTTCTCC +
Preference number: 5 (lower is better)
Translates to: QKWQDGVPALVSENYYDLIPADL*LVADFS
Trigger: GGAGAAGTCTGCCACCAGCAACAAGTCAGCCGGGAT...GAGATCATAATAATTCTCACTGACCAAAGCTGGGACTCCATCCTGCCATTTTTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp ATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCACTTTCCCTGACTGGCTCTTCGTTGGTGGGAAATaGCTTGTTGGTGTTAAAGAT +
Preference number: 5 (lower is better)
Translates to: IKPRLSFALQNSTFPDWLFVGGK*LVGVKD
Trigger: ATCTTTAACACCAACAAGCAATTTCCCACCAACGAA...GAGCCAGTCAGGGAAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp CTGAGTCTGAAACTCTCATGCCATGAGGCTAATCCACAAGTCTTAGATGCTCTTATGGTCTGGCTTCTGTaGGAGGTCAGCTTCAGTCCC +
Preference number: 5 (lower is better)
Translates to: LSLKLSCHEANPQVLDALMVWLL*EVSFSP
Trigger: GGGACTGAAGCTGACCTCCAACAGAAGCCAGACCAT...AAGAGCATCTAAGACTTGTGGATTAGCCTCATGGCATGAGAGTTTCAGACTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409271.5
CDS-3UTR CAA 90 bp TTATCAAAATGTTTGAGCTGCTTCTTCACTAGGATGCCATCCTTCATCATCCCATGGCCTGAGAGTTCTTaGTGGGCGTGCTGGAAGGGA +
Preference number: 5 (lower is better)
Translates to: LSKCLSCFFTRMPSFIIPWPESS*WACWKG
Trigger: TCCCTTCCAGCACGCCCACAAAGAACTCTCAGGCCA...TGGGATGATGAAGGATGGCATCCTAGTGAAGAAGCAGCTCAAACATTTTGATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp TTATCAAAATGTTTGAGCTGCTTCTTCACTAGGATGCCATCCTTCATCATCCCACGCTCTTGGTGGGCTTaGCTGGAGTTGCTGTCAGCT +
Preference number: 5 (lower is better)
Translates to: LSKCLSCFFTRMPSFIIPRSWWA*LELLSA
Trigger: AGCTGACAGCAACTCCAGCAAAGCCCACCAAGAGCG...TGGGATGATGAAGGATGGCATCCTAGTGAAGAAGCAGCTCAAACATTTTGATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp TGTAGTGCAGACCACAGGGTTCCCAGGCCAAAGAGTAATGCAGTAAATGAAATTACGACTCCACACACGTaGGCATACACATCGAGGATC +
Preference number: 5 (lower is better)
Translates to: CSADHRVPRPKSNAVNEITTPHT*AYTSRI
Trigger: GATCCTCGATGTGTATGCCAACGTGTGTGGAGTCGT...AATTTCATTTACTGCATTACTCTTTGGCCTGGGAACCCTGTGGTCTGCACTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp CCATCCTTCATCATCCCAGTAGGGAGTCATCTCCCGCTTAGAACTTCTATTAACACAGCCTTCTCAGAGTaGTACGTGGAGCTGAGCATT +
Preference number: 5 (lower is better)
Translates to: PSFIIPVGSHLPLRTSINTAFSE*YVELSI
Trigger: AATGCTCAGCTCCACGTACAACTCTGAGAAGGCTGT...GTTAATAGAAGTTCTAAGCGGGAGATGACTCCCTACTGGGATGATGAAGGATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp CTCGACATCAAGCCCAGGCTCTCATTTGCGCTGCAGAACTCCACTTTCCCTGACCAGGGTGTCTGCATTTaGTTGCCATTTTATCAAAAT +
Preference number: 5 (lower is better)
Translates to: LDIKPRLSFALQNSTFPDQGVCI*LPFYQN
Trigger: ATTTTGATAAAATGGCAACAAAATGCAGACACCCTG...GTCAGGGAAAGTGGAGTTCTGCAGCGCAAATGAGAGCCTGGGCTTGATGTCGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp GCAGACCACAGGGTTCCCAGGCCAAAGAGTAATGCAGTAAATGAAATTGGCTACCACACATCCAATTGCTaGGACAAACACATGCCTTGC +
Preference number: 5 (lower is better)
Translates to: ADHRVPRPKSNAVNEIGYHTSNC*DKHMPC
Trigger: GCAAGGCATGTGTTTGTCCAAGCAATTGGATGTGTG...GTAGCCAATTTCATTTACTGCATTACTCTTTGGCCTGGGAACCCTGTGGTCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp CAAAAATGGCAGGATGGAGTCCCAGCTTTGGTCAGTGAGAATTATTATGATCTCGCCCTGTCTGCAAGTTaGGAAACTCAGTCCTTGCCG +
Preference number: 5 (lower is better)
Translates to: QKWQDGVPALVSENYYDLALSAS*ETQSLP
Trigger: CGGCAAGGACTGAGTTTCCAAACTTGCAGACAGGGC...GAGATCATAATAATTCTCACTGACCAAAGCTGGGACTCCATCCTGCCATTTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp CAAAAATGGCAGGATGGAGTCCCAGCTTTGGTCAGTGAGAATTATTATGATCTCCTGGGGCAGAGGGCTTaGTCTTCAGGATGTAGAACA +
Preference number: 5 (lower is better)
Translates to: QKWQDGVPALVSENYYDLLGQRA*SSGCRT
Trigger: TGTTCTACATCCTGAAGACAAAGCCCTCTGCCCCAG...GAGATCATAATAATTCTCACTGACCAAAGCTGGGACTCCATCCTGCCATTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp CCATCCTTCATCATCCCAGTAGGGAGTCATCTCCCGCTTAGAACTTCTATTAACTGGGCTTTGCTGGAGTaGCTGTCAGCTTCTCAAATT +
Preference number: 5 (lower is better)
Translates to: PSFIIPVGSHLPLRTSINWALLE*LSASQI
Trigger: AATTTGAGAAGCTGACAGCAACTCCAGCAAAGCCCA...GTTAATAGAAGTTCTAAGCGGGAGATGACTCCCTACTGGGATGATGAAGGATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp AGGCGAGCATCTGAAAGTATCCCGGCTCTAGTCCTTTATCTTTGGTTAAATTGGACAGCCTTCTCAGAGTaGTACGTGGAGCTGAGCATT +
Preference number: 5 (lower is better)
Translates to: RRASESIPALVLYLWLNWTAFSE*YVELSI
Trigger: AATGCTCAGCTCCACGTACAACTCTGAGAAGGCTGT...CCAATTTAACCAAAGATAAAGGACTAGAGCCGGGATACTTTCAGATGCTCGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp AGGCGAGCATCTGAAAGTATCCCGGCTCTAGTCCTTTATCTTTGGTTAAATTGGCTGTGTCCTTCAGCATaGCTGCCCCTAAAAGGTCAA +
Preference number: 5 (lower is better)
Translates to: RRASESIPALVLYLWLNWLCPSA*LPLKGQ
Trigger: TTGACCTTTTAGGGGCAGCAATGCTGAAGGACACAG...CCAATTTAACCAAAGATAAAGGACTAGAGCCGGGATACTTTCAGATGCTCGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp CTGAGTCTGAAACTCTCATGCCATGAGGCTAATCCACAAGTCTTAGATGCTCTTCTGTGTCCTTCAGCATaGCTGCCCCTAAAAGGTCAA +
Preference number: 5 (lower is better)
Translates to: LSLKLSCHEANPQVLDALLCPSA*LPLKGQ
Trigger: TTGACCTTTTAGGGGCAGCAATGCTGAAGGACACAG...AAGAGCATCTAAGACTTGTGGATTAGCCTCATGGCATGAGAGTTTCAGACTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp CCAATTATAGAATCACTAACTAACATCTCATTGGCAGACGAGAAACTGAGGCAGACGACTCCACACACGTaGGCATACACATCGAGGATC +
Preference number: 5 (lower is better)
Translates to: PIIESLTNISLADEKLRQTTPHT*AYTSRI
Trigger: GATCCTCGATGTGTATGCCAACGTGTGTGGAGTCGT...CTGCCTCAGTTTCTCGTCTGCCAATGAGATGTTAGTTAGTGATTCTATAATTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp CTGGAGTGCAAACTCCTTAAAGACAGGGACCAGATTCTTCACTTCTGTCATTCCCTTCATTCAGCTTGTTaGACGTCTTCCAGTGAAGTG +
Preference number: 5 (lower is better)
Translates to: LECKLLKDRDQILHFCHSLHSAC*TSSSEV
Trigger: CACTTCACTGGAAGACGTCAAACAAGCTGAATGAAG...GGAATGACAGAAGTGAAGAATCTGGTCCCTGTCTTTAAGGAGTTTGCACTCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp GCAGACCACAGGGTTCCCAGGCCAAAGAGTAATGCAGTAAATGAAATTGGCTACCACATGCCTTGCATATaGGTTTTGTATAGAGTGAGC +
Preference number: 5 (lower is better)
Translates to: ADHRVPRPKSNAVNEIGYHMPCI*VLYRVS
Trigger: GCTCACTCTATACAAAACCAATATGCAAGGCATGTG...GTAGCCAATTTCATTTACTGCATTACTCTTTGGCCTGGGAACCCTGTGGTCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp TGTAGTGCAGACCACAGGGTTCCCAGGCCAAAGAGTAATGCAGTAAATGAAATTCACACATCCAATTGCTaGGACAAACACATGCCTTGC +
Preference number: 5 (lower is better)
Translates to: CSADHRVPRPKSNAVNEIHTSNC*DKHMPC
Trigger: GCAAGGCATGTGTTTGTCCAAGCAATTGGATGTGTG...AATTTCATTTACTGCATTACTCTTTGGCCTGGGAACCCTGTGGTCTGCACTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp AGGCGAGCATCTGAAAGTATCCCGGCTCTAGTCCTTTATCTTTGGTTAAATTGGACAAACCACACTGTGTaGACTTCCATAGAGCACCTC +
Preference number: 5 (lower is better)
Translates to: RRASESIPALVLYLWLNWTNHTV*TSIEHL
Trigger: GAGGTGCTCTATGGAAGTCAACACAGTGTGGTTTGT...CCAATTTAACCAAAGATAAAGGACTAGAGCCGGGATACTTTCAGATGCTCGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp TGTAGTGCAGACCACAGGGTTCCCAGGCCAAAGAGTAATGCAGTAAATGAAATTCTTCATTCAGCTTGTTaGACGTCTTCCAGTGAAGTG +
Preference number: 5 (lower is better)
Translates to: CSADHRVPRPKSNAVNEILHSAC*TSSSEV
Trigger: CACTTCACTGGAAGACGTCAAACAAGCTGAATGAAG...AATTTCATTTACTGCATTACTCTTTGGCCTGGGAACCCTGTGGTCTGCACTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp CTGGAGTGCAAACTCCTTAAAGACAGGGACCAGATTCTTCACTTCTGTCATTCCCACATGCCTTGCATATaGGTTTTGTATAGAGTGAGC +
Preference number: 5 (lower is better)
Translates to: LECKLLKDRDQILHFCHSHMPCI*VLYRVS
Trigger: GCTCACTCTATACAAAACCAATATGCAAGGCATGTG...GGAATGACAGAAGTGAAGAATCTGGTCCCTGTCTTTAAGGAGTTTGCACTCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp TGTAGTGCAGACCACAGGGTTCCCAGGCCAAAGAGTAATGCAGTAAATGAAATTCTAACTAACATCTCATaGGCAGACGAGAAACTGAGG +
Preference number: 5 (lower is better)
Translates to: CSADHRVPRPKSNAVNEILTNIS*ADEKLR
Trigger: CCTCAGTTTCTCGTCTGCCAATGAGATGTTAGTTAG...AATTTCATTTACTGCATTACTCTTTGGCCTGGGAACCCTGTGGTCTGCACTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp GCAGACCACAGGGTTCCCAGGCCAAAGAGTAATGCAGTAAATGAAATTGGCTACTTCGTTGGTGGGAAATaGCTTGTTGGTGTTAAAGAT +
Preference number: 5 (lower is better)
Translates to: ADHRVPRPKSNAVNEIGYFVGGK*LVGVKD
Trigger: ATCTTTAACACCAACAAGCAATTTCCCACCAACGAA...GTAGCCAATTTCATTTACTGCATTACTCTTTGGCCTGGGAACCCTGTGGTCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp AGGCGAGCATCTGAAAGTATCCCGGCTCTAGTCCTTTATCTTTGGTTAAATTGGCGTGGAGTATTTAGCTaGCAGGGTAAACCAAATAGG +
Preference number: 5 (lower is better)
Translates to: RRASESIPALVLYLWLNWRGVFS*QGKPNR
Trigger: CCTATTTGGTTTACCCTGCAAGCTAAATACTCCACG...CCAATTTAACCAAAGATAAAGGACTAGAGCCGGGATACTTTCAGATGCTCGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp CCAATTATAGAATCACTAACTAACATCTCATTGGCAGACGAGAAACTGAGGCAGATTTCGTCTGGCTCCTaGAACATCCTAAGGCATACG +
Preference number: 5 (lower is better)
Translates to: PIIESLTNISLADEKLRQISSGS*NILRHT
Trigger: CGTATGCCTTAGGATGTTCAAGGAGCCAGACGAAAT...CTGCCTCAGTTTCTCGTCTGCCAATGAGATGTTAGTTAGTGATTCTATAATTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp CTGAGTCTGAAACTCTCATGCCATGAGGCTAATCCACAAGTCTTAGATGCTCTTCCTTGCATATTGGTTTaGTATAGAGTGAGCTCTTCC +
Preference number: 5 (lower is better)
Translates to: LSLKLSCHEANPQVLDALPCILV*YRVSSS
Trigger: GGAAGAGCTCACTCTATACAAAACCAATATGCAAGG...AAGAGCATCTAAGACTTGTGGATTAGCCTCATGGCATGAGAGTTTCAGACTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp TGTAGTGCAGACCACAGGGTTCCCAGGCCAAAGAGTAATGCAGTAAATGAAATTCCTTGCATATTGGTTTaGTATAGAGTGAGCTCTTCC +
Preference number: 5 (lower is better)
Translates to: CSADHRVPRPKSNAVNEIPCILV*YRVSSS
Trigger: GGAAGAGCTCACTCTATACAAAACCAATATGCAAGG...AATTTCATTTACTGCATTACTCTTTGGCCTGGGAACCCTGTGGTCTGCACTACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp TTATCAAAATGTTTGAGCTGCTTCTTCACTAGGATGCCATCCTTCATCATCCCACACACATCCAATTGCTaGGACAAACACATGCCTTGC +
Preference number: 5 (lower is better)
Translates to: LSKCLSCFFTRMPSFIIPHTSNC*DKHMPC
Trigger: GCAAGGCATGTGTTTGTCCAAGCAATTGGATGTGTG...TGGGATGATGAAGGATGGCATCCTAGTGAAGAAGCAGCTCAAACATTTTGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp CCATCCTTCATCATCCCAGTAGGGAGTCATCTCCCGCTTAGAACTTCTATTAACTTCGTTGGTGGGAAATaGCTTGTTGGTGTTAAAGAT +
Preference number: 5 (lower is better)
Translates to: PSFIIPVGSHLPLRTSINFVGGK*LVGVKD
Trigger: ATCTTTAACACCAACAAGCAATTTCCCACCAACGAA...GTTAATAGAAGTTCTAAGCGGGAGATGACTCCCTACTGGGATGATGAAGGATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp AGAATTATGAATATCTCCACACAAAAATGGCAGGATGGAGTCCCAGCTTTGGTCCGTGGAGTATTTAGCTaGCAGGGTAAACCAAATAGG +
Preference number: 5 (lower is better)
Translates to: RIMNISTQKWQDGVPALVRGVFS*QGKPNR
Trigger: CCTATTTGGTTTACCCTGCAAGCTAAATACTCCACG...GACCAAAGCTGGGACTCCATCCTGCCATTTTTGTGTGGAGATATTCATAATTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp CTGAGTCTGAAACTCTCATGCCATGAGGCTAATCCACAAGTCTTAGATGCTCTTGATGGAGTCCCAGCTTaGGTCAGTGAGAATTATTAT +
Preference number: 5 (lower is better)
Translates to: LSLKLSCHEANPQVLDALDGVPA*VSENYY
Trigger: ATAATAATTCTCACTGACCAAAGCTGGGACTCCATC...AAGAGCATCTAAGACTTGTGGATTAGCCTCATGGCATGAGAGTTTCAGACTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp CAAAAATGGCAGGATGGAGTCCCAGCTTTGGTCAGTGAGAATTATTATGATCTCCCTTGCATATTGGTTTaGTATAGAGTGAGCTCTTCC +
Preference number: 5 (lower is better)
Translates to: QKWQDGVPALVSENYYDLPCILV*YRVSSS
Trigger: GGAAGAGCTCACTCTATACAAAACCAATATGCAAGG...GAGATCATAATAATTCTCACTGACCAAAGCTGGGACTCCATCCTGCCATTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp CAAAAATGGCAGGATGGAGTCCCAGCTTTGGTCAGTGAGAATTATTATGATCTCCACATGCCTTGCATATaGGTTTTGTATAGAGTGAGC +
Preference number: 5 (lower is better)
Translates to: QKWQDGVPALVSENYYDLHMPCI*VLYRVS
Trigger: GCTCACTCTATACAAAACCAATATGCAAGGCATGTG...GAGATCATAATAATTCTCACTGACCAAAGCTGGGACTCCATCCTGCCATTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp CCAATTATAGAATCACTAACTAACATCTCATTGGCAGACGAGAAACTGAGGCAGCTAACTAACATCTCATaGGCAGACGAGAAACTGAGG +
Preference number: 5 (lower is better)
Translates to: PIIESLTNISLADEKLRQLTNIS*ADEKLR
Trigger: CCTCAGTTTCTCGTCTGCCAATGAGATGTTAGTTAG...CTGCCTCAGTTTCTCGTCTGCCAATGAGATGTTAGTTAGTGATTCTATAATTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp CCAATTATAGAATCACTAACTAACATCTCATTGGCAGACGAGAAACTGAGGCAGCGTGGAGTATTTAGCTaGCAGGGTAAACCAAATAGG +
Preference number: 5 (lower is better)
Translates to: PIIESLTNISLADEKLRQRGVFS*QGKPNR
Trigger: CCTATTTGGTTTACCCTGCAAGCTAAATACTCCACG...CTGCCTCAGTTTCTCGTCTGCCAATGAGATGTTAGTTAGTGATTCTATAATTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp TGTAGTGCAGACCACAGGGTTCCCAGGCCAAAGAGTAATGCAGTAAATGAAATTTCTAGTCCTTTATCTTaGGTTAAATTGGAAGACAGG +
Preference number: 5 (lower is better)
Translates to: CSADHRVPRPKSNAVNEISSPLS*VKLEDR
Trigger: CCTGTCTTCCAATTTAACCAAAGATAAAGGACTAGA...AATTTCATTTACTGCATTACTCTTTGGCCTGGGAACCCTGTGGTCTGCACTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp CTGAGTCTGAAACTCTCATGCCATGAGGCTAATCCACAAGTCTTAGATGCTCTTTCTAGTCCTTTATCTTaGGTTAAATTGGAAGACAGG +
Preference number: 5 (lower is better)
Translates to: LSLKLSCHEANPQVLDALSSPLS*VKLEDR
Trigger: CCTGTCTTCCAATTTAACCAAAGATAAAGGACTAGA...AAGAGCATCTAAGACTTGTGGATTAGCCTCATGGCATGAGAGTTTCAGACTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp AGGCGAGCATCTGAAAGTATCCCGGCTCTAGTCCTTTATCTTTGGTTAAATTGGCAGGGTGTCTGCATTTaGTTGCCATTTTATCAAAAT +
Preference number: 5 (lower is better)
Translates to: RRASESIPALVLYLWLNWQGVCI*LPFYQN
Trigger: ATTTTGATAAAATGGCAACAAAATGCAGACACCCTG...CCAATTTAACCAAAGATAAAGGACTAGAGCCGGGATACTTTCAGATGCTCGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp CAAAAATGGCAGGATGGAGTCCCAGCTTTGGTCAGTGAGAATTATTATGATCTCTCTAGTCCTTTATCTTaGGTTAAATTGGAAGACAGG +
Preference number: 5 (lower is better)
Translates to: QKWQDGVPALVSENYYDLSSPLS*VKLEDR
Trigger: CCTGTCTTCCAATTTAACCAAAGATAAAGGACTAGA...GAGATCATAATAATTCTCACTGACCAAAGCTGGGACTCCATCCTGCCATTTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS-3UTR CAA 90 bp CCAATTATAGAATCACTAACTAACATCTCATTGGCAGACGAGAAACTGAGGCAGCAGGGTGTCTGCATTTaGTTGCCATTTTATCAAAAT +
Preference number: 5 (lower is better)
Translates to: PIIESLTNISLADEKLRQQGVCI*LPFYQN
Trigger: ATTTTGATAAAATGGCAACAAAATGCAGACACCCTG...CTGCCTCAGTTTCTCGTCTGCCAATGAGATGTTAGTTAGTGATTCTATAATTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS GCA 72 bp CCGGGCAGGGGACGCAGCCGTAGTCCTCGTCTTTGGTaGCGTAGCCACAGGACAGGTAGGGCTCCTCTCCCG +
Preference number: 6 (lower is better)
Translates to: PGRGRSRSPRLW*RSHRTGRAPLP
Trigger: CGGGAGAGGAGCCCTACCTGTCCTGTGGCTACGGCACCAAAGACGAGGACTACGGCTGCGTCCCCTGCCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS CCA 72 bp GTTGACGGAGAGTCCAGGAAGCAGGGCACCGGCGCATaGGGGCCGTCACCTGGGGCAGAGGGCTTTGTCTTC +
Preference number: 6 (lower is better)
Translates to: VDGESRKQGTGA*GPSPGAEGFVF
Trigger: GAAGACAAAGCCCTCTGCCCCAGGTGACGGCCCCCATGCGCCGGTGCCCTGCTTCCTGGACTCTCCGTCAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000376651.1
ENST00000409271.5
CDS GCA 72 bp CCACGTTGTCTGGGGCCTCTTTCTTCTCCTCGTCCTTaGTCACTTGGGCCTCCACGCTCTTCCCCGGGTGGC +
Preference number: 6 (lower is better)
Translates to: PRCLGPLSSPRP*SLGPPRSSPGG
Trigger: GCCACCCGGGGAAGAGCGTGGAGGCCCAAGTGAGCAAGGACGAGGAGAAGAAAGAGGCCCCAGACAACGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS GCA 72 bp CCATCCTCTCCCAAGGGCTCACGTGTCCCGAGGGCCTaGAGAGGGCTTGCTGCTCCTCTCAGGCTGGCTATT +
Preference number: 6 (lower is better)
Translates to: PSSPKGSRVPRA*RGLAAPLRLAI
Trigger: AATAGCCAGCCTGAGAGGAGCAGCAAGCCCTCTGCAGGCCCTCGGGACACGTGAGCCCTTGGGAGAGGATGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409271.5
CDS CCA 72 bp TCCCGGCTGACTTGTTGCTGGTGGCAGACTTCTCCCTaGCCAGGTGAACCAGCGACAGCAGGCACAGCTCCG +
Preference number: 6 (lower is better)
Translates to: SRLTCCWWQTSP*PGEPATAGTAP
Trigger: CGGAGCTGTGCCTGCTGTCGCTGGTTCACCTGGCCAGGGAGAAGTCTGCCACCAGCAACAAGTCAGCCGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS CCA 72 bp GCAAGGGCCACACTCAGCGTCATTCTCCATGTCCCCTaGTGTCAGCACGGTGGCCCGGAAGAAGCCCTCACA +
Preference number: 6 (lower is better)
Translates to: ARATLSVILHVP*CQHGGPEEALT
Trigger: TGTGAGGGCTTCTTCCGGGCCACCGTGCTGACACCAGGGGACATGGAGAATGACGCTGAGTGTGGCCCTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS CCA 72 bp CAGGAAGCAGGGCACCGGCGCATGGGGGCCGTCACCTaGGGCAGAGGGCTTTGTCTTCAGGATGTAGAACAT +
Preference number: 6 (lower is better)
Translates to: QEAGHRRMGAVT*GRGLCLQDVEH
Trigger: ATGTTCTACATCCTGAAGACAAAGCCCTCTGCCCCAGGTGACGGCCCCCATGCGCCGGTGCCCTGCTTCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000376651.1
ENST00000409271.5
CDS CAA 72 bp GGAGACAGGGTGCTGCTGCCCGAGGTGCCAGGGAAGTaGGCAGAAGCTCCTGAAGTGGCTCCCACACATTCC +
Preference number: 6 (lower is better)
Translates to: GDRVLLPEVPGK*AEAPEVAPTHS
Trigger: GGAATGTGTGGGAGCCACTTCAGGAGCTTCTGCCAACTTCCCTGGCACCTCGGGCAGCAGCACCCTGTCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS TCA 72 bp GGTAATGCAGAAGGTGCCCACATGGGTGGTGGAGGCTaGGCCTCCCAGGATGGCTCGGATGGTCTGGCTTCT +
Preference number: 6 (lower is better)
Translates to: GNAEGAHMGGGG*ASQDGSDGLAS
Trigger: AGAAGCCAGACCATCCGAGCCATCCTGGGAGGCTCAGCCTCCACCACCCATGTGGGCACCTTCTGCATTACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000409271.5
CDS CCA 72 bp CAGCGTCATTCTCCATGTCCCCTGGTGTCAGCACGGTaGCCCGGAAGAAGCCCTCACAGTCTTTGTGACGCC +
Preference number: 6 (lower is better)
Translates to: QRHSPCPLVSAR*PGRSPHSLCDA
Trigger: GGCGTCACAAAGACTGTGAGGGCTTCTTCCGGGCCACCGTGCTGACACCAGGGGACATGGAGAATGACGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS CCA 72 bp GAGACAGGGTGCTGCTGCCCGAGGTGCCAGGGAAGTTaGCAGAAGCTCCTGAAGTGGCTCCCACACATTCCT +
Preference number: 6 (lower is better)
Translates to: ETGCCCPRCQGS*QKLLKWLPHIP
Trigger: AGGAATGTGTGGGAGCCACTTCAGGAGCTTCTGCCAACTTCCCTGGCACCTCGGGCAGCAGCACCCTGTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS CAA 90 bp TGCTGGAAGGGAGACAGGGTGCTGCTGCCCGAGGTGCCAGGGAAGTaGGCAGAAGCTCCTGAAGTGGCTCCCACACATTCCTTGGTGTTG +
Preference number: 6 (lower is better)
Translates to: CWKGDRVLLPEVPGK*AEAPEVAPTHSLVL
Trigger: CAACACCAAGGAATGTGTGGGAGCCACTTCAGGAGCTTCTGCCAACTTCCCTGGCACCTCGGGCAGCAGCACCCTGTCTCCCTTCCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS CAA 90 bp GAGAACATCACCACGTTGTCTGGGGCCTCTTTCTTCTCCTCGTCCTaGCTCACTTGGGCCTCCACGCTCTTCCCCGGGTGGCTGGTGCAA +
Preference number: 6 (lower is better)
Translates to: ENITTLSGASFFSSS*LTWASTLFPGWLVQ
Trigger: TTGCACCAGCCACCCGGGGAAGAGCGTGGAGGCCCAAGTGAGCAAGGACGAGGAGAAGAAAGAGGCCCCAGACAACGTGGTGATGTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS GCA 72 bp GGCTCCTCATCACTGTCGACGCTCCGGCTCAGCAGCTaGTCATTCTCGGATGAGGCATCGTTCTCGCTCTTG +
Preference number: 6 (lower is better)
Translates to: GSSSLSTLRLSS*SFSDEASFSLL
Trigger: CAAGAGCGAGAACGATGCCTCATCCGAGAATGAGCAGCTGCTGAGCCGGAGCGTCGACAGTGATGAGGAGCC
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS CCA 72 bp AGGTACCATCCAGTTCTGGGTGACAGGCTTCACAGGTaGCCACCGTGGCAGCCCTCTCAGAAGCAGGTACTC +
Preference number: 6 (lower is better)
Translates to: RYHPVLGDRLHR*PPWQPSQKQVL
Trigger: GAGTACCTGCTTCTGAGAGGGCTGCCACGGTGGCCACCTGTGAAGCCTGTCACCCAGAACTGGATGGTACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS CCA 72 bp AAGCTCCTGAAGTGGCTCCCACACATTCCTTGGTGTTaGGGGGTGCCAGGAGGCAGGAGTAGCAGACCATGC +
Preference number: 6 (lower is better)
Translates to: KLLKWLPHIPWC*GVPGGRSSRPC
Trigger: GCATGGTCTGCTACTCCTGCCTCCTGGCACCCCCCAACACCAAGGAATGTGTGGGAGCCACTTCAGGAGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS CCA 72 bp TCCTCCGGCTTTGAATCCCGGCTGACTTGTTGCTGGTaGCAGACTTCTCCCTGGCCAGGTGAACCAGCGACA +
Preference number: 6 (lower is better)
Translates to: SSGFESRLTCCW*QTSPWPGEPAT
Trigger: TGTCGCTGGTTCACCTGGCCAGGGAGAAGTCTGCCACCAGCAACAAGTCAGCCGGGATTCAAAGCCGGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS CCA 72 bp CCAGTTCTGGGTGACAGGCTTCACAGGTGGCCACCGTaGCAGCCCTCTCAGAAGCAGGTACTCTATGTCCTT +
Preference number: 6 (lower is better)
Translates to: PVLGDRLHRWPP*QPSQKQVLYVL
Trigger: AAGGACATAGAGTACCTGCTTCTGAGAGGGCTGCCACGGTGGCCACCTGTGAAGCCTGTCACCCAGAACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS CCA 72 bp AGTCTTTGTGACGCCTGCATATCTGGTAGCCTCCTTTaGAAAACTTCTCCGCCGGGCAGGGGACGCAGCCGT +
Preference number: 6 (lower is better)
Translates to: SLCDACISGSLL*KTSPPGRGRSR
Trigger: ACGGCTGCGTCCCCTGCCCGGCGGAGAAGTTTTCCAAAGGAGGCTACCAGATATGCAGGCGTCACAAAGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS CCA 72 bp TTTTCCTCCGGCTTTGAATCCCGGCTGACTTGTTGCTaGTGGCAGACTTCTCCCTGGCCAGGTGAACCAGCG +
Preference number: 6 (lower is better)
Translates to: FSSGFESRLTCC*WQTSPWPGEPA
Trigger: CGCTGGTTCACCTGGCCAGGGAGAAGTCTGCCACCAGCAACAAGTCAGCCGGGATTCAAAGCCGGAGGAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS CCA 72 bp GCTGAGCATTCGGCTAGTCTTCTCGAGGCAATCAAATaGCAGCTCCGTGGGGCTAAGACCTTCCACGACTCC +
Preference number: 6 (lower is better)
Translates to: AEHSASLLEAIK*QLRGAKTFHDS
Trigger: GGAGTCGTGGAAGGTCTTAGCCCCACGGAGCTGCCATTTGATTGCCTCGAGAAGACTAGCCGAATGCTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS CCA 72 bp ATCTCATCCCTCTTCAGGCCGAAGCTCTCGGCGAGGTaGCGCCACGTTTTCACAACAGCCTTCTCAGAGTTG +
Preference number: 6 (lower is better)
Translates to: ISSLFRPKLSAR*RHVFTTAFSEL
Trigger: CAACTCTGAGAAGGCTGTTGTGAAAACGTGGCGCCACCTCGCCGAGAGCTTCGGCCTGAAGAGGGATGAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS CAA 72 bp GATGCTGTAGCCTGCCGTGCTGATGCGGTCAAAGAGTaGCATGCCGTCTGTCATGCCCCCAATCTCATCCCT +
Preference number: 6 (lower is better)
Translates to: DAVACRADAVKE*HAVCHAPNLIP
Trigger: AGGGATGAGATTGGGGGCATGACAGACGGCATGCAACTCTTTGACCGCATCAGCACGGCAGGCTACAGCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS CAA 90 bp CTCTCGGCGAGGTGGCGCCACGTTTTCACAACAGCCTTCTCAGAGTaGTACGTGGAGCTGAGCATTCGGCTAGTCTTCTCGAGGCAATCA +
Preference number: 6 (lower is better)
Translates to: LSARWRHVFTTAFSE*YVELSIRLVFSRQS
Trigger: TGATTGCCTCGAGAAGACTAGCCGAATGCTCAGCTCCACGTACAACTCTGAGAAGGCTGTTGTGAAAACGTGGCGCCACCTCGCCGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS CAA 90 bp AGCCCCGCTTCCTTTCCGTTTAAAGGGCTTCCCGGGAACTCTTCCTaGACCGCTCCCTGCCCTGTCTGCAAGTTTGGAAACTCAGTCCTT +
Preference number: 6 (lower is better)
Translates to: SPASFPFKGLPGNSS*TAPCPVCKFGNSVL
Trigger: AAGGACTGAGTTTCCAAACTTGCAGACAGGGCAGGGAGCGGTCAAGGAAGAGTTCCCGGGAAGCCCTTTAAACGGAAAGGAAGCGGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376651.1
ENST00000409271.5
CDS CAA 72 bp CTCCCTGCCCTGTCTGCAAGTTTGGAAACTCAGTCCTaGCCGAGGGGCTTTCCCTCATTGCAAACTCACCTG +
Preference number: 6 (lower is better)
Translates to: LPALSASLETQS*PRGFPSLQTHL
Trigger: CAGGTGAGTTTGCAATGAGGGAAAGCCCCTCGGCAAGGACTGAGTTTCCAAACTTGCAGACAGGGCAGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000376651.1
ENST00000409271.5
CDS TCA 72 bp CCTTTCCGTTTAAAGGGCTTCCCGGGAACTCTTCCTTaGCCGCTCCCTGCCCTGTCTGCAAGTTTGGAAACT +
Preference number: 6 (lower is better)
Translates to: PFRLKGFPGTLP*PLPALSASLET
Trigger: AGTTTCCAAACTTGCAGACAGGGCAGGGAGCGGTCAAGGAAGAGTTCCCGGGAAGCCCTTTAAACGGAAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376651.1
ENST00000409271.5
CDS GCA 72 bp TGGCCCGGAAGAAGCCCTCACAGTCTTTGTGACGCCTaGATATCTGGTAGCCTCCTTTGGAAAACTTCTCCG +
Preference number: 6 (lower is better)
Translates to: WPGRSPHSLCDA*ISGSLLWKTSP
Trigger: CGGAGAAGTTTTCCAAAGGAGGCTACCAGATATGCAGGCGTCACAAAGACTGTGAGGGCTTCTTCCGGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS CAA 72 bp TCCGTGGGGCTAAGACCTTCCACGACTCCACACACGTaGGCATACACATCGAGGATCTTTTTCCTCCGGCTT +
Preference number: 6 (lower is better)
Translates to: SVGLRPSTTPHT*AYTSRIFFLRL
Trigger: AAGCCGGAGGAAAAAGATCCTCGATGTGTATGCCAACGTGTGTGGAGTCGTGGAAGGTCTTAGCCCCACGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS CAA 72 bp AGGTGGCGCCACGTTTTCACAACAGCCTTCTCAGAGTaGTACGTGGAGCTGAGCATTCGGCTAGTCTTCTCG +
Preference number: 6 (lower is better)
Translates to: RWRHVFTTAFSE*YVELSIRLVFS
Trigger: CGAGAAGACTAGCCGAATGCTCAGCTCCACGTACAACTCTGAGAAGGCTGTTGTGAAAACGTGGCGCCACCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5
CDS CAA 72 bp TTGGAAACTCAGTCCTTGCCGAGGGGCTTTCCCTCATaGCAAACTCACCTGCACCATCTAGAGGTCTCTCCC +
Preference number: 6 (lower is better)
Translates to: LETQSLPRGFPS*QTHLHHLEVSP
Trigger: GGGAGAGACCTCTAGATGGTGCAGGTGAGTTTGCAATGAGGGAAAGCCCCTCGGCAAGGACTGAGTTTCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000376651.1
CDS CAA 72 bp TCCTTTCCGTTTAAAGGGCTTCCCGGGAACTCTTCCTaGACCGCTCCCTGCCCTGTCTGCAAGTTTGGAAAC +
Preference number: 6 (lower is better)
Translates to: SFPFKGLPGNSS*TAPCPVCKFGN
Trigger: GTTTCCAAACTTGCAGACAGGGCAGGGAGCGGTCAAGGAAGAGTTCCCGGGAAGCCCTTTAAACGGAAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000376651.1
ENST00000409271.5
CDS TCA 72 bp GGAGGTCAGCTTCAGTCCCAGCAGAAGATGGGTCTATaGAGAAAGTCAGGTACCATCCAGTTCTGGGTGACA +
Preference number: 6 (lower is better)
Translates to: GGQLQSQQKMGL*RKSGTIQFWVT
Trigger: TGTCACCCAGAACTGGATGGTACCTGACTTTCTTCATAGACCCATCTTCTGCTGGGACTGAAGCTGACCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258443.7
ENST00000376651.1
ENST00000409271.5