RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EDA2R (Homo sapiens)

Ensembl gene IDs: ENSG00000131080

Ensembl transcript IDs: ENST00000253392.5, ENST00000374719.8, ENST00000396050.5, ENST00000451436.6

Found 450 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCCAGGGATCTAGAGGGAAAGTGTTTGCCCTGCCTCATGCTGCAATaGAGCAGTCTGAGACATGAACTTGGGAATTATGGCACGAGGCCT +
Preference number: 1 (lower is better)
Translates to: PRDLEGKCLPCLMLQ*SSLRHELGNYGTRP
Trigger: AGGCCTCGTGCCATAATTCCCAAGTTCATGTCTCAGACTGCTGCATTGCAGCATGAGGCAGGGCAAACACTTTCCCTCTAGATCCCTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR CCA 90 bp CAGATGTCCCTACATGGATTGAGGGCTGTCTTTGAGGGACTGCTGTaGGGTAGTTTGGGGAACTCAGGCCCCAGAAGGAAGATTACTTTG +
Preference number: 1 (lower is better)
Translates to: QMSLHGLRAVFEGLL*GSLGNSGPRRKITL
Trigger: CAAAGTAATCTTCCTTCTGGGGCCTGAGTTCCCCAAACTACCCCACAGCAGTCCCTCAAAGACAGCCCTCAATCCATGTAGGGACATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR GCA 90 bp TGTGGGCTTGAACCACTGCCAGCCACATGGCAACCTTTGAACACCTaGAGCCTGCTGAAGCCAAATCATCCCCTGTCTGGATATTATTTC +
Preference number: 1 (lower is better)
Translates to: CGLEPLPATWQPLNT*SLLKPNHPLSGYYF
Trigger: GAAATAATATCCAGACAGGGGATGATTTGGCTTCAGCAGGCTGCAGGTGTTCAAAGGTTGCCATGTGGCTGGCAGTGGTTCAAGCCCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR TCA 90 bp AAAGTGTTTGCCCTGCCTCATGCTGCAATGCAGCAGTCTGAGACATaGACTTGGGAATTATGGCACGAGGCCTCCCCCAAGATAGATATT +
Preference number: 1 (lower is better)
Translates to: KVFALPHAAMQQSET*TWELWHEASPKIDI
Trigger: AATATCTATCTTGGGGGAGGCCTCGTGCCATAATTCCCAAGTTCATGTCTCAGACTGCTGCATTGCAGCATGAGGCAGGGCAAACACTTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR GCA 90 bp GAATGTGGAATCTGGCTCCCCAGACTACAAAAGGGAAGCAAGAAATaGTCCAGATCAGTCCTTGTGAAATGGAGAATCAATCCTCTGGTG +
Preference number: 1 (lower is better)
Translates to: ECGIWLPRLQKGSKK*SRSVLVKWRINPLV
Trigger: CACCAGAGGATTGATTCTCCATTTCACAAGGACTGATCTGGAGCATTTCTTGCTTCCCTTTTGTAGTCTGGGGAGCCAGATTCCACATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR CCA 90 bp CTACAAAAGGGAAGCAAGAAATGCTCCAGATCAGTCCTTGTGAAATaGAGAATCAATCCTCTGGTGGGATGGGATAGGATATGCCCCATC +
Preference number: 1 (lower is better)
Translates to: LQKGSKKCSRSVLVK*RINPLVGWDRICPI
Trigger: GATGGGGCATATCCTATCCCATCCCACCAGAGGATTGATTCTCCATTTCACAAGGACTGATCTGGAGCATTTCTTGCTTCCCTTTTGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR CCA 90 bp CCAAGGCCTAAAACCTTGGTTACCACATATTTGCTAATACCTGTGTaGGGCCAGGCTGCTTGCTTGGTACAGGCTTGTATTTCAATTGCT +
Preference number: 1 (lower is better)
Translates to: PRPKTLVTTYLLIPV*GQAACLVQACISIA
Trigger: AGCAATTGAAATACAAGCCTGTACCAAGCAAGCAGCCTGGCCCCACACAGGTATTAGCAAATATGTGGTAACCAAGGTTTTAGGCCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR GCA 90 bp CTTGTGAAATGGAGAATCAATCCTCTGGTGGGATGGGATAGGATATaGCCCATCTGTAGGGTATTAGCTCTTGTGGACATCACATTTCAG +
Preference number: 1 (lower is better)
Translates to: LVKWRINPLVGWDRI*PICRVLALVDITFQ
Trigger: CTGAAATGTGATGTCCACAAGAGCTAATACCCTACAGATGGGGCATATCCTATCCCATCCCACCAGAGGATTGATTCTCCATTTCACAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR GCA 90 bp TTGGTTACCACATATTTGCTAATACCTGTGTGGGGCCAGGCTGCTTaGTTGGTACAGGCTTGTATTTCAATTGCTTCTAATCCTCAGTCC +
Preference number: 1 (lower is better)
Translates to: LVTTYLLIPVWGQAA*LVQACISIASNPQS
Trigger: GGACTGAGGATTAGAAGCAATTGAAATACAAGCCTGTACCAAGCAAGCAGCCTGGCCCCACACAGGTATTAGCAAATATGTGGTAACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR TCA 90 bp CTTCTCTATAATCAAGTTGAGCTAGGAACATGTCTGGTAGTCCCATaGATGTGGAATCTGGCTCCCCAGACTACAAAAGGGAAGCAAGAA +
Preference number: 1 (lower is better)
Translates to: LLYNQVELGTCLVVP*MWNLAPQTTKGKQE
Trigger: TTCTTGCTTCCCTTTTGTAGTCTGGGGAGCCAGATTCCACATTCATGGGACTACCAGACATGTTCCTAGCTCAACTTGATTATAGAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR CCA 90 bp ACCTTTGAACACCTGCAGCCTGCTGAAGCCAAATCATCCCCTGTCTaGATATTATTTCTTCTACCAGAAGGTCTAAACATGATCAGTGAA +
Preference number: 1 (lower is better)
Translates to: TFEHLQPAEAKSSPV*ILFLLPEGLNMISE
Trigger: TTCACTGATCATGTTTAGACCTTCTGGTAGAAGAAATAATATCCAGACAGGGGATGATTTGGCTTCAGCAGGCTGCAGGTGTTCAAAGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR GCA 90 bp TACAGGGTGAGGCCCCAGGGATCTAGAGGGAAAGTGTTTGCCCTGCCTCATGCTACAACTGGGCAAGGCTaGCAGGGGCCCAAGAGACCT +
Preference number: 2 (lower is better)
Translates to: YRVRPQGSRGKVFALPHATTGQG*QGPKRP
Trigger: AGGTCTCTTGGGCCCCTGGCAGCCTTGCCCAGTTGT...AGCATGAGGCAGGGCAAACACTTTCCCTCTAGATCCCTGGGGCCTCACCCTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR CCA 90 bp TACAGGGTGAGGCCCCAGGGATCTAGAGGGAAAGTGTTTGCCCTGCCTCATGCTCCCCTGCTGCTGTTGTaGTATAGGAACAGAGTCCAG +
Preference number: 2 (lower is better)
Translates to: YRVRPQGSRGKVFALPHAPLLLL*YRNRVQ
Trigger: CTGGACTCTGTTCCTATACCACAACAGCAGCAGGGG...AGCATGAGGCAGGGCAAACACTTTCCCTCTAGATCCCTGGGGCCTCACCCTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR TCA 90 bp AGCAGCAGTGTCAAATGTGGGCTTGAACCACTGCCAGCCACATGGCAACCTTTGACCTCAAATACAGGGTaGGGCCCCAGGGATCTAGAG +
Preference number: 2 (lower is better)
Translates to: SSSVKCGLEPLPATWQPLTSNTG*GPRDLE
Trigger: CTCTAGATCCCTGGGGCCTCACCCTGTATTTGAGGT...CAAAGGTTGCCATGTGGCTGGCAGTGGTTCAAGCCCACATTTGACACTGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR GCA 90 bp TACAGGGTGAGGCCCCAGGGATCTAGAGGGAAAGTGTTTGCCCTGCCTCATGCTCACATTTCAGGCCCCTaGTGCTGTTGTGGTATAGGA +
Preference number: 2 (lower is better)
Translates to: YRVRPQGSRGKVFALPHAHISGP*CCCGIG
Trigger: TCCTATACCACAACAGCAGCAGGGGCCTGAAATGTG...AGCATGAGGCAGGGCAAACACTTTCCCTCTAGATCCCTGGGGCCTCACCCTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR CAA 90 bp AGTGTCAAATGTGGGCTTGAACCACTGCCAGCCACATGGCAACCTTaGAACACCTGCAGCCTGCTGAAGCCAAATCATCCCCTGTCTGGA +
Preference number: 2 (lower is better)
Translates to: SVKCGLEPLPATWQP*NTCSLLKPNHPLSG
Trigger: TCCAGACAGGGGATGATTTGGCTTCAGCAGGCTGCAGGTGTTCAAAGGTTGCCATGTGGCTGGCAGTGGTTCAAGCCCACATTTGACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR CCA 90 bp CATTATCTTTCCTCTAGAGCAGCAGTGTCAAATGTGGGCTTGAACCACTGCCAGTCCAGAGAGAACAACTaGGCAAGGCTGCCAGGGGCC +
Preference number: 2 (lower is better)
Translates to: HYLSSRAAVSNVGLNHCQSRENN*ARLPGA
Trigger: GGCCCCTGGCAGCCTTGCCCAGTTGTTCTCTCTGGA...CTGGCAGTGGTTCAAGCCCACATTTGACACTGCTGCTCTAGAGGAAAGATAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR GCA 90 bp TACAGGGTGAGGCCCCAGGGATCTAGAGGGAAAGTGTTTGCCCTGCCTCATGCTGGATGGGATAGGATATaGCCCATCTGTAGGGTATTA +
Preference number: 2 (lower is better)
Translates to: YRVRPQGSRGKVFALPHAGWDRI*PICRVL
Trigger: TAATACCCTACAGATGGGGCATATCCTATCCCATCC...AGCATGAGGCAGGGCAAACACTTTCCCTCTAGATCCCTGGGGCCTCACCCTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR TCA 90 bp CATTATCTTTCCTCTAGAGCAGCAGTGTCAAATGTGGGCTTGAACCACTGCCAGACCTCAAATACAGGGTaGGGCCCCAGGGATCTAGAG +
Preference number: 2 (lower is better)
Translates to: HYLSSRAAVSNVGLNHCQTSNTG*GPRDLE
Trigger: CTCTAGATCCCTGGGGCCTCACCCTGTATTTGAGGT...CTGGCAGTGGTTCAAGCCCACATTTGACACTGCTGCTCTAGAGGAAAGATAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR TCA 90 bp GACAGGGCTGTATGTTGTAGAGGGGTATGCTGTAGTGCTGAATCCTTTCCTAACTGTCAAATGTGGGCTTaGACCACTGCCAGCCACATG +
Preference number: 2 (lower is better)
Translates to: DRAVCCRGVCCSAESFPNCQMWA*TTASHM
Trigger: CATGTGGCTGGCAGTGGTTCAAGCCCACATTTGACA...GTTAGGAAAGGATTCAGCACTACAGCATACCCCTCTACAACATACAGCCCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR GCA 90 bp AGACTACAAAAGGGAAGCAAGAAATGCTCCAGATCAGTCCTTGTGAAATGGAGAACAACTGGGCAAGGCTaGCAGGGGCCCAAGAGACCT +
Preference number: 2 (lower is better)
Translates to: RLQKGSKKCSRSVLVKWRTTGQG*QGPKRP
Trigger: AGGTCTCTTGGGCCCCTGGCAGCCTTGCCCAGTTGT...TCTCCATTTCACAAGGACTGATCTGGAGCATTTCTTGCTTCCCTTTTGTAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR CCA 90 bp GACAGGGCTGTATGTTGTAGAGGGGTATGCTGTAGTGCTGAATCCTTTCCTAACCCCCTGCTGCTGTTGTaGTATAGGAACAGAGTCCAG +
Preference number: 2 (lower is better)
Translates to: DRAVCCRGVCCSAESFPNPLLLL*YRNRVQ
Trigger: CTGGACTCTGTTCCTATACCACAACAGCAGCAGGGG...GTTAGGAAAGGATTCAGCACTACAGCATACCCCTCTACAACATACAGCCCTGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR CCA 90 bp AGCAGCAGTGTCAAATGTGGGCTTGAACCACTGCCAGCCACATGGCAACCTTTGTGTAAGGTTCCAAAATaGCGAACTTCAGCCCTTCTC +
Preference number: 2 (lower is better)
Translates to: SSSVKCGLEPLPATWQPLCKVPK*RTSALL
Trigger: GAGAAGGGCTGAAGTTCGCCATTTTGGAACCTTACA...CAAAGGTTGCCATGTGGCTGGCAGTGGTTCAAGCCCACATTTGACACTGCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR TCA 90 bp GTCCCTAAAGTGCTAGGTAGATGTGCCAACACAATTTTGAGAGGCTTACCTGACTGTCTGGTAGTCCCATaGATGTGGAATCTGGCTCCC +
Preference number: 2 (lower is better)
Translates to: VPKVLGRCANTILRGLPDCLVVP*MWNLAP
Trigger: GGGAGCCAGATTCCACATTCATGGGACTACCAGACA...GTCAGGTAAGCCTCTCAAAATTGTGTTGGCACATCTACCTAGCACTTTAGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR GCA 90 bp CACCTTTACCCGAAATACTTTAAAATGCAAAGCCAATTGCCACCTCCAATTGCTACAACTGGGCAAGGCTaGCAGGGGCCCAAGAGACCT +
Preference number: 2 (lower is better)
Translates to: HLYPKYFKMQSQLPPPIATTGQG*QGPKRP
Trigger: AGGTCTCTTGGGCCCCTGGCAGCCTTGCCCAGTTGT...AGCAATTGGAGGTGGCAATTGGCTTTGCATTTTAAAGTATTTCGGGTAAAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR GCA 90 bp CATTATCTTTCCTCTAGAGCAGCAGTGTCAAATGTGGGCTTGAACCACTGCCAGCACATTTCAGGCCCCTaGTGCTGTTGTGGTATAGGA +
Preference number: 2 (lower is better)
Translates to: HYLSSRAAVSNVGLNHCQHISGP*CCCGIG
Trigger: TCCTATACCACAACAGCAGCAGGGGCCTGAAATGTG...CTGGCAGTGGTTCAAGCCCACATTTGACACTGCTGCTCTAGAGGAAAGATAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR CCA 90 bp CACCTTTACCCGAAATACTTTAAAATGCAAAGCCAATTGCCACCTCCAATTGCTTCCAGAGAGAACAACTaGGCAAGGCTGCCAGGGGCC +
Preference number: 2 (lower is better)
Translates to: HLYPKYFKMQSQLPPPIASRENN*ARLPGA
Trigger: GGCCCCTGGCAGCCTTGCCCAGTTGTTCTCTCTGGA...AGCAATTGGAGGTGGCAATTGGCTTTGCATTTTAAAGTATTTCGGGTAAAGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR CCA 90 bp AATAGAAAGAGGCATACTCAGATGTCCCTACATGGATTGAGGGCTGTCTTTGAGTGCTGTGGGGTAGTTTaGGGAACTCAGGCCCCAGAA +
Preference number: 2 (lower is better)
Translates to: NRKRHTQMSLHGLRAVFECCGVV*GTQAPE
Trigger: TTCTGGGGCCTGAGTTCCCCAAACTACCCCACAGCA...CTCAAAGACAGCCCTCAATCCATGTAGGGACATCTGAGTATGCCTCTTTCTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR TCA 90 bp CATTATCTTTCCTCTAGAGCAGCAGTGTCAAATGTGGGCTTGAACCACTGCCAGCAGCAGTCTGAGACATaGACTTGGGAATTATGGCAC +
Preference number: 2 (lower is better)
Translates to: HYLSSRAAVSNVGLNHCQQQSET*TWELWH
Trigger: GTGCCATAATTCCCAAGTTCATGTCTCAGACTGCTG...CTGGCAGTGGTTCAAGCCCACATTTGACACTGCTGCTCTAGAGGAAAGATAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR GCA 90 bp GACAGGGCTGTATGTTGTAGAGGGGTATGCTGTAGTGCTGAATCCTTTCCTAACTGCCTCATGCTGCAATaGAGCAGTCTGAGACATGAA +
Preference number: 2 (lower is better)
Translates to: DRAVCCRGVCCSAESFPNCLMLQ*SSLRHE
Trigger: TTCATGTCTCAGACTGCTGCATTGCAGCATGAGGCA...GTTAGGAAAGGATTCAGCACTACAGCATACCCCTCTACAACATACAGCCCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR GCA 90 bp GACAGGGCTGTATGTTGTAGAGGGGTATGCTGTAGTGCTGAATCCTTTCCTAACCAACCTTTGAACACCTaGAGCCTGCTGAAGCCAAAT +
Preference number: 2 (lower is better)
Translates to: DRAVCCRGVCCSAESFPNQPLNT*SLLKPN
Trigger: ATTTGGCTTCAGCAGGCTGCAGGTGTTCAAAGGTTG...GTTAGGAAAGGATTCAGCACTACAGCATACCCCTCTACAACATACAGCCCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR CCA 90 bp GACAGGGCTGTATGTTGTAGAGGGGTATGCTGTAGTGCTGAATCCTTTCCTAACAGTAATCTGATCAATTaGTTGCCCCAGGGGCCCTTA +
Preference number: 2 (lower is better)
Translates to: DRAVCCRGVCCSAESFPNSNLIN*LPQGPL
Trigger: TAAGGGCCCCTGGGGCAACCAATTGATCAGATTACT...GTTAGGAAAGGATTCAGCACTACAGCATACCCCTCTACAACATACAGCCCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR CCA 90 bp GACAGGGCTGTATGTTGTAGAGGGGTATGCTGTAGTGCTGAATCCTTTCCTAACGCCAGGCTGCTTGCTTaGTACAGGCTTGTATTTCAA +
Preference number: 2 (lower is better)
Translates to: DRAVCCRGVCCSAESFPNARLLA*YRLVFQ
Trigger: TTGAAATACAAGCCTGTACCAAGCAAGCAGCCTGGC...GTTAGGAAAGGATTCAGCACTACAGCATACCCCTCTACAACATACAGCCCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR CCA 90 bp ATTATTTTCCCAGGCTCCCTCCTGTCAAAATCCAAGTCAAGGTATATGGAGAGACCACTGCCAGCCACATaGCAACCTTTGAACACCTGC +
Preference number: 2 (lower is better)
Translates to: IIFPGSLLSKSKSRYMERPLPAT*QPLNTC
Trigger: GCAGGTGTTCAAAGGTTGCCATGTGGCTGGCAGTGG...TCTCTCCATATACCTTGACTTGGATTTTGACAGGAGGGAGCCTGGGAAAATAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR TCA 90 bp CATTATCTTTCCTCTAGAGCAGCAGTGTCAAATGTGGGCTTGAACCACTGCCAGGTGCCAACACAATTTTaGGAGGCTTACCTGACCAAA +
Preference number: 2 (lower is better)
Translates to: HYLSSRAAVSNVGLNHCQVPTQF*EAYLTK
Trigger: TTTGGTCAGGTAAGCCTCTCAAAATTGTGTTGGCAC...CTGGCAGTGGTTCAAGCCCACATTTGACACTGCTGCTCTAGAGGAAAGATAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR TCA 90 bp GACAGGGCTGTATGTTGTAGAGGGGTATGCTGTAGTGCTGAATCCTTTCCTAACGTCCTTTTAGTAATCTaGTCAATTGGTTGCCCCAGG +
Preference number: 2 (lower is better)
Translates to: DRAVCCRGVCCSAESFPNVLLVI*SIGCPR
Trigger: CCTGGGGCAACCAATTGATCAGATTACTAAAAGGAC...GTTAGGAAAGGATTCAGCACTACAGCATACCCCTCTACAACATACAGCCCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR TCA 90 bp CACCTTTACCCGAAATACTTTAAAATGCAAAGCCAATTGCCACCTCCAATTGCTACACCTGCAGCCTGCTaGAGCCAAATCATCCCCTGT +
Preference number: 2 (lower is better)
Translates to: HLYPKYFKMQSQLPPPIATPAAC*SQIIPC
Trigger: ACAGGGGATGATTTGGCTTCAGCAGGCTGCAGGTGT...AGCAATTGGAGGTGGCAATTGGCTTTGCATTTTAAAGTATTTCGGGTAAAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR GCA 90 bp GTCCCTAAAGTGCTAGGTAGATGTGCCAACACAATTTTGAGAGGCTTACCTGACATTTCAGGCCCCTGCTaGTGTTGTGGTATAGGAACA +
Preference number: 2 (lower is better)
Translates to: VPKVLGRCANTILRGLPDISGPC*CCGIGT
Trigger: TGTTCCTATACCACAACAGCAGCAGGGGCCTGAAAT...GTCAGGTAAGCCTCTCAAAATTGTGTTGGCACATCTACCTAGCACTTTAGGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR CCA 90 bp AATACTTTAAAATGCAAAGCCAATTGCCACCTCCAATTGCTGAACCTCAAAAAGTCCAGAGAGAACAACTaGGCAAGGCTGCCAGGGGCC +
Preference number: 2 (lower is better)
Translates to: NTLKCKANCHLQLLNLKKSRENN*ARLPGA
Trigger: GGCCCCTGGCAGCCTTGCCCAGTTGTTCTCTCTGGA...CTTTTTGAGGTTCAGCAATTGGAGGTGGCAATTGGCTTTGCATTTTAAAGTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR CCA 90 bp ATTATTTTCCCAGGCTCCCTCCTGTCAAAATCCAAGTCAAGGTATATGGAGAGATTGCTAATACCTGTGTaGGGCCAGGCTGCTTGCTTG +
Preference number: 2 (lower is better)
Translates to: IIFPGSLLSKSKSRYMERLLIPV*GQAACL
Trigger: CAAGCAAGCAGCCTGGCCCCACACAGGTATTAGCAA...TCTCTCCATATACCTTGACTTGGATTTTGACAGGAGGGAGCCTGGGAAAATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR CAA 90 bp GTTACCACATATTTGCTAATACCTGTGTGGGGCCAGGCTGCTTGCTaGGTACAGGCTTGTATTTCAATTGCTTCTAATCCTCAGTCCAGT +
Preference number: 2 (lower is better)
Translates to: VTTYLLIPVWGQAAC*VQACISIASNPQSS
Trigger: ACTGGACTGAGGATTAGAAGCAATTGAAATACAAGCCTGTACCAAGCAAGCAGCCTGGCCCCACACAGGTATTAGCAAATATGTGGTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR TCA 90 bp CACCTTTACCCGAAATACTTTAAAATGCAAAGCCAATTGCCACCTCCAATTGCTTGTCCCTACATGGATTaGGGGCTGTCTTTGAGGGAC +
Preference number: 2 (lower is better)
Translates to: HLYPKYFKMQSQLPPPIACPYMD*GLSLRD
Trigger: GTCCCTCAAAGACAGCCCTCAATCCATGTAGGGACA...AGCAATTGGAGGTGGCAATTGGCTTTGCATTTTAAAGTATTTCGGGTAAAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR GCA 90 bp GTCCCTAAAGTGCTAGGTAGATGTGCCAACACAATTTTGAGAGGCTTACCTGACAAGGGAAGCAAGAAATaGTCCAGATCAGTCCTTGTG +
Preference number: 2 (lower is better)
Translates to: VPKVLGRCANTILRGLPDKGSKK*SRSVLV
Trigger: CACAAGGACTGATCTGGAGCATTTCTTGCTTCCCTT...GTCAGGTAAGCCTCTCAAAATTGTGTTGGCACATCTACCTAGCACTTTAGGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR CCA 90 bp AATAGAAAGAGGCATACTCAGATGTCCCTACATGGATTGAGGGCTGTCTTTGAGGAATCAATCCTCTGGTaGGATGGGATAGGATATGCC +
Preference number: 2 (lower is better)
Translates to: NRKRHTQMSLHGLRAVFEESILW*DGIGYA
Trigger: GGCATATCCTATCCCATCCCACCAGAGGATTGATTC...CTCAAAGACAGCCCTCAATCCATGTAGGGACATCTGAGTATGCCTCTTTCTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR CCA 90 bp AGCAGCAGTGTCAAATGTGGGCTTGAACCACTGCCAGCCACATGGCAACCTTTGAAATCATCCCCTGTCTaGATATTATTTCTTCTACCA +
Preference number: 2 (lower is better)
Translates to: SSSVKCGLEPLPATWQPLKSSPV*ILFLLP
Trigger: TGGTAGAAGAAATAATATCCAGACAGGGGATGATTT...CAAAGGTTGCCATGTGGCTGGCAGTGGTTCAAGCCCACATTTGACACTGCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR TCA 90 bp AATAGAAAGAGGCATACTCAGATGTCCCTACATGGATTGAGGGCTGTCTTTGAGCCAAAAATGCAGACATaGAAACCCTACCCCATTCAC +
Preference number: 2 (lower is better)
Translates to: NRKRHTQMSLHGLRAVFEPKMQT*KPYPIH
Trigger: GTGAATGGGGTAGGGTTTTCATGTCTGCATTTTTGG...CTCAAAGACAGCCCTCAATCCATGTAGGGACATCTGAGTATGCCTCTTTCTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR TCA 90 bp AATAGAAAGAGGCATACTCAGATGTCCCTACATGGATTGAGGGCTGTCTTTGAGGTGCCAACACAATTTTaGGAGGCTTACCTGACCAAA +
Preference number: 2 (lower is better)
Translates to: NRKRHTQMSLHGLRAVFEVPTQF*EAYLTK
Trigger: TTTGGTCAGGTAAGCCTCTCAAAATTGTGTTGGCAC...CTCAAAGACAGCCCTCAATCCATGTAGGGACATCTGAGTATGCCTCTTTCTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR CCA 90 bp CACCTTTACCCGAAATACTTTAAAATGCAAAGCCAATTGCCACCTCCAATTGCTAATCCTCTGGTGGGATaGGATAGGATATGCCCCATC +
Preference number: 2 (lower is better)
Translates to: HLYPKYFKMQSQLPPPIANPLVG*DRICPI
Trigger: GATGGGGCATATCCTATCCCATCCCACCAGAGGATT...AGCAATTGGAGGTGGCAATTGGCTTTGCATTTTAAAGTATTTCGGGTAAAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR CCA 90 bp CATTATCTTTCCTCTAGAGCAGCAGTGTCAAATGTGGGCTTGAACCACTGCCAGCATGAGATGTATAGGTaGGAGCTAAAGGCAAAAAGA +
Preference number: 2 (lower is better)
Translates to: HYLSSRAAVSNVGLNHCQHEMYR*ELKAKR
Trigger: TCTTTTTGCCTTTAGCTCCCACCTATACATCTCATG...CTGGCAGTGGTTCAAGCCCACATTTGACACTGCTGCTCTAGAGGAAAGATAATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR CCA 90 bp ATTATTTTCCCAGGCTCCCTCCTGTCAAAATCCAAGTCAAGGTATATGGAGAGAATTCTGGGTATGGCTTaGGCTGTCCACATAGCATTC +
Preference number: 2 (lower is better)
Translates to: IIFPGSLLSKSKSRYMERILGMA*AVHIAF
Trigger: GAATGCTATGTGGACAGCCCAAGCCATACCCAGAAT...TCTCTCCATATACCTTGACTTGGATTTTGACAGGAGGGAGCCTGGGAAAATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR TCA 90 bp ATTATTTTCCCAGGCTCCCTCCTGTCAAAATCCAAGTCAAGGTATATGGAGAGACCAAAAATGCAGACATaGAAACCCTACCCCATTCAC +
Preference number: 2 (lower is better)
Translates to: IIFPGSLLSKSKSRYMERPKMQT*KPYPIH
Trigger: GTGAATGGGGTAGGGTTTTCATGTCTGCATTTTTGG...TCTCTCCATATACCTTGACTTGGATTTTGACAGGAGGGAGCCTGGGAAAATAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR TCA 90 bp GACAGGGCTGTATGTTGTAGAGGGGTATGCTGTAGTGCTGAATCCTTTCCTAACAAGCTGGGATTGAATTaGCATTTCAATAGAAAGAGG +
Preference number: 2 (lower is better)
Translates to: DRAVCCRGVCCSAESFPNKLGLN*HFNRKR
Trigger: CCTCTTTCTATTGAAATGTCAATTCAATCCCAGCTT...GTTAGGAAAGGATTCAGCACTACAGCATACCCCTCTACAACATACAGCCCTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR GCA 90 bp AATACTTTAAAATGCAAAGCCAATTGCCACCTCCAATTGCTGAACCTCAAAAAGGGAAAGTGTTTGCCCTaGCTCATGCTGCAATGCAGC +
Preference number: 2 (lower is better)
Translates to: NTLKCKANCHLQLLNLKKGKCLP*LMLQCS
Trigger: GCTGCATTGCAGCATGAGGCAGGGCAAACACTTTCC...CTTTTTGAGGTTCAGCAATTGGAGGTGGCAATTGGCTTTGCATTTTAAAGTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR TCA 90 bp TATTATTACTGTGTTACCATCATTATCTTTCCTCTAGAGCAGCAGTGTCAAATGTGTCTGGTAGTCCCATaGATGTGGAATCTGGCTCCC +
Preference number: 2 (lower is better)
Translates to: YYYCVTIIIFPLEQQCQMCLVVP*MWNLAP
Trigger: GGGAGCCAGATTCCACATTCATGGGACTACCAGACA...CATTTGACACTGCTGCTCTAGAGGAAAGATAATGATGGTAACACAGTAATAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR GCA 90 bp GAAGTGCACATTCTGCCTAATGTACTTAATAAACCACTTAATAGTTGTGGGACACACATTTCAGGCCCCTaGTGCTGTTGTGGTATAGGA +
Preference number: 2 (lower is better)
Translates to: EVHILPNVLNKPLNSCGTHISGP*CCCGIG
Trigger: TCCTATACCACAACAGCAGCAGGGGCCTGAAATGTG...TGTCCCACAACTATTAAGTGGTTTATTAAGTACATTAGGCAGAATGTGCACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR GCA 90 bp TATTATTACTGTGTTACCATCATTATCTTTCCTCTAGAGCAGCAGTGTCAAATGCTGTCTTTGAGGGACTaGTGTGGGGTAGTTTGGGGA +
Preference number: 2 (lower is better)
Translates to: YYYCVTIIIFPLEQQCQMLSLRD*CGVVWG
Trigger: TCCCCAAACTACCCCACAGCAGTCCCTCAAAGACAG...CATTTGACACTGCTGCTCTAGAGGAAAGATAATGATGGTAACACAGTAATAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR GCA 90 bp TATTATTACTGTGTTACCATCATTATCTTTCCTCTAGAGCAGCAGTGTCAAATGTGGGGCCAGGCTGCTTaGTTGGTACAGGCTTGTATT +
Preference number: 2 (lower is better)
Translates to: YYYCVTIIIFPLEQQCQMWGQAA*LVQACI
Trigger: AATACAAGCCTGTACCAAGCAAGCAGCCTGGCCCCA...CATTTGACACTGCTGCTCTAGAGGAAAGATAATGATGGTAACACAGTAATAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR CCA 90 bp AATACTTTAAAATGCAAAGCCAATTGCCACCTCCAATTGCTGAACCTCAAAAAGAATCCTCTGGTGGGATaGGATAGGATATGCCCCATC +
Preference number: 2 (lower is better)
Translates to: NTLKCKANCHLQLLNLKKNPLVG*DRICPI
Trigger: GATGGGGCATATCCTATCCCATCCCACCAGAGGATT...CTTTTTGAGGTTCAGCAATTGGAGGTGGCAATTGGCTTTGCATTTTAAAGTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR CCA 90 bp CACCTTTACCCGAAATACTTTAAAATGCAAAGCCAATTGCCACCTCCAATTGCTGGAGAATCAATCCTCTaGTGGGATGGGATAGGATAT +
Preference number: 2 (lower is better)
Translates to: HLYPKYFKMQSQLPPPIAGESIL*WDGIGY
Trigger: ATATCCTATCCCATCCCACCAGAGGATTGATTCTCC...AGCAATTGGAGGTGGCAATTGGCTTTGCATTTTAAAGTATTTCGGGTAAAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR CCA 90 bp CATTATCTTTCCTCTAGAGCAGCAGTGTCAAATGTGGGCTTGAACCACTGCCAGATCAGTGTTTGTAGATaGATGAACCCAAAAGATGTA +
Preference number: 2 (lower is better)
Translates to: HYLSSRAAVSNVGLNHCQISVCR*MNPKDV
Trigger: TACATCTTTTGGGTTCATCCATCTACAAACACTGAT...CTGGCAGTGGTTCAAGCCCACATTTGACACTGCTGCTCTAGAGGAAAGATAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR CCA 90 bp TATTATTACTGTGTTACCATCATTATCTTTCCTCTAGAGCAGCAGTGTCAAATGTTGCTAATACCTGTGTaGGGCCAGGCTGCTTGCTTG +
Preference number: 2 (lower is better)
Translates to: YYYCVTIIIFPLEQQCQMLLIPV*GQAACL
Trigger: CAAGCAAGCAGCCTGGCCCCACACAGGTATTAGCAA...CATTTGACACTGCTGCTCTAGAGGAAAGATAATGATGGTAACACAGTAATAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR TCA 90 bp GAAGTGCACATTCTGCCTAATGTACTTAATAAACCACTTAATAGTTGTGGGACACAGCAGTCTGAGACATaGACTTGGGAATTATGGCAC +
Preference number: 2 (lower is better)
Translates to: EVHILPNVLNKPLNSCGTQQSET*TWELWH
Trigger: GTGCCATAATTCCCAAGTTCATGTCTCAGACTGCTG...TGTCCCACAACTATTAAGTGGTTTATTAAGTACATTAGGCAGAATGTGCACTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR GCA 90 bp GAAGTGCACATTCTGCCTAATGTACTTAATAAACCACTTAATAGTTGTGGGACAATTTCAGGCCCCTGCTaGTGTTGTGGTATAGGAACA +
Preference number: 2 (lower is better)
Translates to: EVHILPNVLNKPLNSCGTISGPC*CCGIGT
Trigger: TGTTCCTATACCACAACAGCAGCAGGGGCCTGAAAT...TGTCCCACAACTATTAAGTGGTTTATTAAGTACATTAGGCAGAATGTGCACTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR GCA 90 bp GAAGTGCACATTCTGCCTAATGTACTTAATAAACCACTTAATAGTTGTGGGACATGCCTCATGCTGCAATaGAGCAGTCTGAGACATGAA +
Preference number: 2 (lower is better)
Translates to: EVHILPNVLNKPLNSCGTCLMLQ*SSLRHE
Trigger: TTCATGTCTCAGACTGCTGCATTGCAGCATGAGGCA...TGTCCCACAACTATTAAGTGGTTTATTAAGTACATTAGGCAGAATGTGCACTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR CCA 90 bp AATACTTTAAAATGCAAAGCCAATTGCCACCTCCAATTGCTGAACCTCAAAAAGGAATCAATCCTCTGGTaGGATGGGATAGGATATGCC +
Preference number: 2 (lower is better)
Translates to: NTLKCKANCHLQLLNLKKESILW*DGIGYA
Trigger: GGCATATCCTATCCCATCCCACCAGAGGATTGATTC...CTTTTTGAGGTTCAGCAATTGGAGGTGGCAATTGGCTTTGCATTTTAAAGTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR TCA 90 bp AATACTTTAAAATGCAAAGCCAATTGCCACCTCCAATTGCTGAACCTCAAAAAGTGCAATGCAGCAGTCTaGGACATGAACTTGGGAATT +
Preference number: 2 (lower is better)
Translates to: NTLKCKANCHLQLLNLKKCNAAV*DMNLGI
Trigger: AATTCCCAAGTTCATGTCTCAGACTGCTGCATTGCA...CTTTTTGAGGTTCAGCAATTGGAGGTGGCAATTGGCTTTGCATTTTAAAGTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR GCA 90 bp AATACTTTAAAATGCAAAGCCAATTGCCACCTCCAATTGCTGAACCTCAAAAAGGGATGGGATAGGATATaGCCCATCTGTAGGGTATTA +
Preference number: 2 (lower is better)
Translates to: NTLKCKANCHLQLLNLKKGWDRI*PICRVL
Trigger: TAATACCCTACAGATGGGGCATATCCTATCCCATCC...CTTTTTGAGGTTCAGCAATTGGAGGTGGCAATTGGCTTTGCATTTTAAAGTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR GCA 90 bp TATTATTACTGTGTTACCATCATTATCTTTCCTCTAGAGCAGCAGTGTCAAATGTGCCTCATGCTGCAATaGAGCAGTCTGAGACATGAA +
Preference number: 2 (lower is better)
Translates to: YYYCVTIIIFPLEQQCQMCLMLQ*SSLRHE
Trigger: TTCATGTCTCAGACTGCTGCATTGCAGCATGAGGCA...CATTTGACACTGCTGCTCTAGAGGAAAGATAATGATGGTAACACAGTAATAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR CCA 90 bp GAAGTGCACATTCTGCCTAATGTACTTAATAAACCACTTAATAGTTGTGGGACAGGAGAATCAATCCTCTaGTGGGATGGGATAGGATAT +
Preference number: 2 (lower is better)
Translates to: EVHILPNVLNKPLNSCGTGESIL*WDGIGY
Trigger: ATATCCTATCCCATCCCACCAGAGGATTGATTCTCC...TGTCCCACAACTATTAAGTGGTTTATTAAGTACATTAGGCAGAATGTGCACTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR CCA 90 bp AATACTTTAAAATGCAAAGCCAATTGCCACCTCCAATTGCTGAACCTCAAAAAGCATGAATGTGGAATCTaGCTCCCCAGACTACAAAAG +
Preference number: 2 (lower is better)
Translates to: NTLKCKANCHLQLLNLKKHECGI*LPRLQK
Trigger: CTTTTGTAGTCTGGGGAGCCAGATTCCACATTCATG...CTTTTTGAGGTTCAGCAATTGGAGGTGGCAATTGGCTTTGCATTTTAAAGTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR CCA 90 bp GAAGTGCACATTCTGCCTAATGTACTTAATAAACCACTTAATAGTTGTGGGACATGTAAGGTTCCAAAATaGCGAACTTCAGCCCTTCTC +
Preference number: 2 (lower is better)
Translates to: EVHILPNVLNKPLNSCGTCKVPK*RTSALL
Trigger: GAGAAGGGCTGAAGTTCGCCATTTTGGAACCTTACA...TGTCCCACAACTATTAAGTGGTTTATTAAGTACATTAGGCAGAATGTGCACTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR CCA 90 bp AATACTTTAAAATGCAAAGCCAATTGCCACCTCCAATTGCTGAACCTCAAAAAGTGTAAGGTTCCAAAATaGCGAACTTCAGCCCTTCTC +
Preference number: 2 (lower is better)
Translates to: NTLKCKANCHLQLLNLKKCKVPK*RTSALL
Trigger: GAGAAGGGCTGAAGTTCGCCATTTTGGAACCTTACA...CTTTTTGAGGTTCAGCAATTGGAGGTGGCAATTGGCTTTGCATTTTAAAGTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR TCA 90 bp TATTATTACTGTGTTACCATCATTATCTTTCCTCTAGAGCAGCAGTGTCAAATGCCAAAAATGCAGACATaGAAACCCTACCCCATTCAC +
Preference number: 2 (lower is better)
Translates to: YYYCVTIIIFPLEQQCQMPKMQT*KPYPIH
Trigger: GTGAATGGGGTAGGGTTTTCATGTCTGCATTTTTGG...CATTTGACACTGCTGCTCTAGAGGAAAGATAATGATGGTAACACAGTAATAATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR TCA 90 bp AATACTTTAAAATGCAAAGCCAATTGCCACCTCCAATTGCTGAACCTCAAAAAGCATGAGCAAGCACACTaGAGAAGTCTTACTCTTTCA +
Preference number: 2 (lower is better)
Translates to: NTLKCKANCHLQLLNLKKHEQAH*RSLTLS
Trigger: TGAAAGAGTAAGACTTCTTCAGTGTGCTTGCTCATG...CTTTTTGAGGTTCAGCAATTGGAGGTGGCAATTGGCTTTGCATTTTAAAGTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR GCA 90 bp TATTATTACTGTGTTACCATCATTATCTTTCCTCTAGAGCAGCAGTGTCAAATGGGATGGGATAGGATATaGCCCATCTGTAGGGTATTA +
Preference number: 2 (lower is better)
Translates to: YYYCVTIIIFPLEQQCQMGWDRI*PICRVL
Trigger: TAATACCCTACAGATGGGGCATATCCTATCCCATCC...CATTTGACACTGCTGCTCTAGAGGAAAGATAATGATGGTAACACAGTAATAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR CCA 90 bp TATTATTACTGTGTTACCATCATTATCTTTCCTCTAGAGCAGCAGTGTCAAATGCATGAATGTGGAATCTaGCTCCCCAGACTACAAAAG +
Preference number: 2 (lower is better)
Translates to: YYYCVTIIIFPLEQQCQMHECGI*LPRLQK
Trigger: CTTTTGTAGTCTGGGGAGCCAGATTCCACATTCATG...CATTTGACACTGCTGCTCTAGAGGAAAGATAATGATGGTAACACAGTAATAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR TCA 90 bp GAAGTGCACATTCTGCCTAATGTACTTAATAAACCACTTAATAGTTGTGGGACAAAGCTGGGATTGAATTaGCATTTCAATAGAAAGAGG +
Preference number: 2 (lower is better)
Translates to: EVHILPNVLNKPLNSCGTKLGLN*HFNRKR
Trigger: CCTCTTTCTATTGAAATGTCAATTCAATCCCAGCTT...TGTCCCACAACTATTAAGTGGTTTATTAAGTACATTAGGCAGAATGTGCACTTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR CCA 90 bp TATTATTACTGTGTTACCATCATTATCTTTCCTCTAGAGCAGCAGTGTCAAATGCATGAGATGTATAGGTaGGAGCTAAAGGCAAAAAGA +
Preference number: 2 (lower is better)
Translates to: YYYCVTIIIFPLEQQCQMHEMYR*ELKAKR
Trigger: TCTTTTTGCCTTTAGCTCCCACCTATACATCTCATG...CATTTGACACTGCTGCTCTAGAGGAAAGATAATGATGGTAACACAGTAATAATA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR CCA 90 bp TATTATTACTGTGTTACCATCATTATCTTTCCTCTAGAGCAGCAGTGTCAAATGATCAGTGTTTGTAGATaGATGAACCCAAAAGATGTA +
Preference number: 2 (lower is better)
Translates to: YYYCVTIIIFPLEQQCQMISVCR*MNPKDV
Trigger: TACATCTTTTGGGTTCATCCATCTACAAACACTGAT...CATTTGACACTGCTGCTCTAGAGGAAAGATAATGATGGTAACACAGTAATAATA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR TCA 72 bp GCCCTGCCTCATGCTGCAATGCAGCAGTCTGAGACATaGACTTGGGAATTATGGCACGAGGCCTCCCCCAAG +
Preference number: 3 (lower is better)
Translates to: ALPHAAMQQSET*TWELWHEASPK
Trigger: CTTGGGGGAGGCCTCGTGCCATAATTCCCAAGTTCATGTCTCAGACTGCTGCATTGCAGCATGAGGCAGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR GCA 72 bp GAACCACTGCCAGCCACATGGCAACCTTTGAACACCTaGAGCCTGCTGAAGCCAAATCATCCCCTGTCTGGA +
Preference number: 3 (lower is better)
Translates to: EPLPATWQPLNT*SLLKPNHPLSG
Trigger: TCCAGACAGGGGATGATTTGGCTTCAGCAGGCTGCAGGTGTTCAAAGGTTGCCATGTGGCTGGCAGTGGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR CAA 90 bp AGCAGCAGTGTCAAATGTGGGCTTGAACCACTGCCAGCCACATGGCAACCTTTGAGGCCCCTGCTGCTGTaGTGGTATAGGAACAGAGTC +
Preference number: 3 (lower is better)
Translates to: SSSVKCGLEPLPATWQPLRPLLL*WYRNRV
Trigger: GACTCTGTTCCTATACCACAACAGCAGCAGGGGCCT...CAAAGGTTGCCATGTGGCTGGCAGTGGTTCAAGCCCACATTTGACACTGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR CCA 72 bp AGTGTCAAATGTGGGCTTGAACCACTGCCAGCCACATaGCAACCTTTGAACACCTGCAGCCTGCTGAAGCCA +
Preference number: 3 (lower is better)
Translates to: SVKCGLEPLPAT*QPLNTCSLLKP
Trigger: TGGCTTCAGCAGGCTGCAGGTGTTCAAAGGTTGCCATGTGGCTGGCAGTGGTTCAAGCCCACATTTGACACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR TCA 72 bp AGTGTTTGCCCTGCCTCATGCTGCAATGCAGCAGTCTaGGACATGAACTTGGGAATTATGGCACGAGGCCTC +
Preference number: 3 (lower is better)
Translates to: SVCPASCCNAAV*DMNLGIMARGL
Trigger: GAGGCCTCGTGCCATAATTCCCAAGTTCATGTCTCAGACTGCTGCATTGCAGCATGAGGCAGGGCAAACACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR CAA 90 bp AGCAGCAGTGTCAAATGTGGGCTTGAACCACTGCCAGCCACATGGCAACCTTTGTGTGCCAACACAATTTaGAGAGGCTTACCTGACCAA +
Preference number: 3 (lower is better)
Translates to: SSSVKCGLEPLPATWQPLCANTI*RGLPDQ
Trigger: TTGGTCAGGTAAGCCTCTCAAAATTGTGTTGGCACA...CAAAGGTTGCCATGTGGCTGGCAGTGGTTCAAGCCCACATTTGACACTGCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR CAA 90 bp AGCAGCAGTGTCAAATGTGGGCTTGAACCACTGCCAGCCACATGGCAACCTTTGAAAGGGGAGAAGGGTTaGATTTTGTCCCTAAAGTGC +
Preference number: 3 (lower is better)
Translates to: SSSVKCGLEPLPATWQPLKGEKG*ILSLKC
Trigger: GCACTTTAGGGACAAAATCAAACCCTTCTCCCCTTT...CAAAGGTTGCCATGTGGCTGGCAGTGGTTCAAGCCCACATTTGACACTGCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR GCA 72 bp GGTATTAGCTCTTGTGGACATCACATTTCAGGCCCCTaGTGCTGTTGTGGTATAGGAACAGAGTCCAGAGAG +
Preference number: 3 (lower is better)
Translates to: GISSCGHHISGP*CCCGIGTESRE
Trigger: CTCTCTGGACTCTGTTCCTATACCACAACAGCAGCAGGGGCCTGAAATGTGATGTCCACAAGAGCTAATACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR GCA 72 bp CTAGAGGGAAAGTGTTTGCCCTGCCTCATGCTGCAATaGAGCAGTCTGAGACATGAACTTGGGAATTATGGC +
Preference number: 3 (lower is better)
Translates to: LEGKCLPCLMLQ*SSLRHELGNYG
Trigger: GCCATAATTCCCAAGTTCATGTCTCAGACTGCTGCATTGCAGCATGAGGCAGGGCAAACACTTTCCCTCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR CAA 90 bp CATTATCTTTCCTCTAGAGCAGCAGTGTCAAATGTGGGCTTGAACCACTGCCAGATGTCCCTACATGGATaGAGGGCTGTCTTTGAGGGA +
Preference number: 3 (lower is better)
Translates to: HYLSSRAAVSNVGLNHCQMSLHG*RAVFEG
Trigger: TCCCTCAAAGACAGCCCTCAATCCATGTAGGGACAT...CTGGCAGTGGTTCAAGCCCACATTTGACACTGCTGCTCTAGAGGAAAGATAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR CAA 90 bp GACAGGGCTGTATGTTGTAGAGGGGTATGCTGTAGTGCTGAATCCTTTCCTAACAATCTGATCAATTGGTaGCCCCAGGGGCCCTTAATC +
Preference number: 3 (lower is better)
Translates to: DRAVCCRGVCCSAESFPNNLINW*PQGPLI
Trigger: GATTAAGGGCCCCTGGGGCAACCAATTGATCAGATT...GTTAGGAAAGGATTCAGCACTACAGCATACCCCTCTACAACATACAGCCCTGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR TCA 72 bp ATAGAAAGAGGCATACTCAGATGTCCCTACATGGATTaGGGGCTGTCTTTGAGGGACTGCTGTGGGGTAGTT +
Preference number: 3 (lower is better)
Translates to: IERGILRCPYMD*GLSLRDCCGVV
Trigger: AACTACCCCACAGCAGTCCCTCAAAGACAGCCCTCAATCCATGTAGGGACATCTGAGTATGCCTCTTTCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR GCA 72 bp ATTAGCTCTTGTGGACATCACATTTCAGGCCCCTGCTaGTGTTGTGGTATAGGAACAGAGTCCAGAGAGAAC +
Preference number: 3 (lower is better)
Translates to: ISSCGHHISGPC*CCGIGTESREN
Trigger: GTTCTCTCTGGACTCTGTTCCTATACCACAACAGCAGCAGGGGCCTGAAATGTGATGTCCACAAGAGCTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR CAA 90 bp AGCAGCAGTGTCAAATGTGGGCTTGAACCACTGCCAGCCACATGGCAACCTTTGTACAATGGGACCTTTTaGCTTTTTCCCAAGTCCTTT +
Preference number: 3 (lower is better)
Translates to: SSSVKCGLEPLPATWQPLYNGTF*LFPKSF
Trigger: AAAGGACTTGGGAAAAAGCAAAAAGGTCCCATTGTA...CAAAGGTTGCCATGTGGCTGGCAGTGGTTCAAGCCCACATTTGACACTGCTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR CAA 90 bp CACCTTTACCCGAAATACTTTAAAATGCAAAGCCAATTGCCACCTCCAATTGCTGTGGGGCCAGGCTGCTaGCTTGGTACAGGCTTGTAT +
Preference number: 3 (lower is better)
Translates to: HLYPKYFKMQSQLPPPIAVGPGC*LGTGLY
Trigger: ATACAAGCCTGTACCAAGCAAGCAGCCTGGCCCCAC...AGCAATTGGAGGTGGCAATTGGCTTTGCATTTTAAAGTATTTCGGGTAAAGGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR CAA 90 bp CACCTTTACCCGAAATACTTTAAAATGCAAAGCCAATTGCCACCTCCAATTGCTAGGCCCCTGCTGCTGTaGTGGTATAGGAACAGAGTC +
Preference number: 3 (lower is better)
Translates to: HLYPKYFKMQSQLPPPIARPLLL*WYRNRV
Trigger: GACTCTGTTCCTATACCACAACAGCAGCAGGGGCCT...AGCAATTGGAGGTGGCAATTGGCTTTGCATTTTAAAGTATTTCGGGTAAAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR CAA 90 bp CATTATCTTTCCTCTAGAGCAGCAGTGTCAAATGTGGGCTTGAACCACTGCCAGTGTGCCAACACAATTTaGAGAGGCTTACCTGACCAA +
Preference number: 3 (lower is better)
Translates to: HYLSSRAAVSNVGLNHCQCANTI*RGLPDQ
Trigger: TTGGTCAGGTAAGCCTCTCAAAATTGTGTTGGCACA...CTGGCAGTGGTTCAAGCCCACATTTGACACTGCTGCTCTAGAGGAAAGATAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR CAA 90 bp CATTATCTTTCCTCTAGAGCAGCAGTGTCAAATGTGGGCTTGAACCACTGCCAGAAAGGGGAGAAGGGTTaGATTTTGTCCCTAAAGTGC +
Preference number: 3 (lower is better)
Translates to: HYLSSRAAVSNVGLNHCQKGEKG*ILSLKC
Trigger: GCACTTTAGGGACAAAATCAAACCCTTCTCCCCTTT...CTGGCAGTGGTTCAAGCCCACATTTGACACTGCTGCTCTAGAGGAAAGATAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR CAA 90 bp ATTATTTTCCCAGGCTCCCTCCTGTCAAAATCCAAGTCAAGGTATATGGAGAGAAATCTGATCAATTGGTaGCCCCAGGGGCCCTTAATC +
Preference number: 3 (lower is better)
Translates to: IIFPGSLLSKSKSRYMERNLINW*PQGPLI
Trigger: GATTAAGGGCCCCTGGGGCAACCAATTGATCAGATT...TCTCTCCATATACCTTGACTTGGATTTTGACAGGAGGGAGCCTGGGAAAATAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR CAA 90 bp CACCTTTACCCGAAATACTTTAAAATGCAAAGCCAATTGCCACCTCCAATTGCTGGCCAGGCTGCTTGCTaGGTACAGGCTTGTATTTCA +
Preference number: 3 (lower is better)
Translates to: HLYPKYFKMQSQLPPPIAGQAAC*VQACIS
Trigger: TGAAATACAAGCCTGTACCAAGCAAGCAGCCTGGCC...AGCAATTGGAGGTGGCAATTGGCTTTGCATTTTAAAGTATTTCGGGTAAAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR CAA 90 bp CACCTTTACCCGAAATACTTTAAAATGCAAAGCCAATTGCCACCTCCAATTGCTGTGTCAAATGTGGGCTaGAACCACTGCCAGCCACAT +
Preference number: 3 (lower is better)
Translates to: HLYPKYFKMQSQLPPPIAVSNVG*NHCQPH
Trigger: ATGTGGCTGGCAGTGGTTCAAGCCCACATTTGACAC...AGCAATTGGAGGTGGCAATTGGCTTTGCATTTTAAAGTATTTCGGGTAAAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR CAA 90 bp ATTATTTTCCCAGGCTCCCTCCTGTCAAAATCCAAGTCAAGGTATATGGAGAGAGATTCTGGGTATGGCTaGGGCTGTCCACATAGCATT +
Preference number: 3 (lower is better)
Translates to: IIFPGSLLSKSKSRYMERDSGYG*GCPHSI
Trigger: AATGCTATGTGGACAGCCCAAGCCATACCCAGAATC...TCTCTCCATATACCTTGACTTGGATTTTGACAGGAGGGAGCCTGGGAAAATAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR CAA 90 bp GACAGGGCTGTATGTTGTAGAGGGGTATGCTGTAGTGCTGAATCCTTTCCTAACAAAATGCAAAGCCAATaGCCACCTCCAATTGCTGAA +
Preference number: 3 (lower is better)
Translates to: DRAVCCRGVCCSAESFPNKMQSQ*PPPIAE
Trigger: TTCAGCAATTGGAGGTGGCAATTGGCTTTGCATTTT...GTTAGGAAAGGATTCAGCACTACAGCATACCCCTCTACAACATACAGCCCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR GCA 72 bp TACCACATATTTGCTAATACCTGTGTGGGGCCAGGCTaGTTGCTTGGTACAGGCTTGTATTTCAATTGCTTC +
Preference number: 3 (lower is better)
Translates to: YHIFANTCVGPG*LLGTGLYFNCF
Trigger: GAAGCAATTGAAATACAAGCCTGTACCAAGCAAGCAGCCTGGCCCCACACAGGTATTAGCAAATATGTGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR CCA 72 bp GGAAGCAAGAAATGCTCCAGATCAGTCCTTGTGAAATaGAGAATCAATCCTCTGGTGGGATGGGATAGGATA +
Preference number: 3 (lower is better)
Translates to: GSKKCSRSVLVK*RINPLVGWDRI
Trigger: TATCCTATCCCATCCCACCAGAGGATTGATTCTCCATTTCACAAGGACTGATCTGGAGCATTTCTTGCTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR CCA 72 bp CACCTGCAGCCTGCTGAAGCCAAATCATCCCCTGTCTaGATATTATTTCTTCTACCAGAAGGTCTAAACATG +
Preference number: 3 (lower is better)
Translates to: HLQPAEAKSSPV*ILFLLPEGLNM
Trigger: CATGTTTAGACCTTCTGGTAGAAGAAATAATATCCAGACAGGGGATGATTTGGCTTCAGCAGGCTGCAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR CAA 90 bp AATACTTTAAAATGCAAAGCCAATTGCCACCTCCAATTGCTGAACCTCAAAAAGAGGCCCCTGCTGCTGTaGTGGTATAGGAACAGAGTC +
Preference number: 3 (lower is better)
Translates to: NTLKCKANCHLQLLNLKKRPLLL*WYRNRV
Trigger: GACTCTGTTCCTATACCACAACAGCAGCAGGGGCCT...CTTTTTGAGGTTCAGCAATTGGAGGTGGCAATTGGCTTTGCATTTTAAAGTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR CAA 90 bp GACAGGGCTGTATGTTGTAGAGGGGTATGCTGTAGTGCTGAATCCTTTCCTAACTACAATGGGACCTTTTaGCTTTTTCCCAAGTCCTTT +
Preference number: 3 (lower is better)
Translates to: DRAVCCRGVCCSAESFPNYNGTF*LFPKSF
Trigger: AAAGGACTTGGGAAAAAGCAAAAAGGTCCCATTGTA...GTTAGGAAAGGATTCAGCACTACAGCATACCCCTCTACAACATACAGCCCTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR GCA 72 bp ATCTGGCTCCCCAGACTACAAAAGGGAAGCAAGAAATaGTCCAGATCAGTCCTTGTGAAATGGAGAATCAAT +
Preference number: 3 (lower is better)
Translates to: IWLPRLQKGSKK*SRSVLVKWRIN
Trigger: ATTGATTCTCCATTTCACAAGGACTGATCTGGAGCATTTCTTGCTTCCCTTTTGTAGTCTGGGGAGCCAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR CAA 90 bp GAAGTGCACATTCTGCCTAATGTACTTAATAAACCACTTAATAGTTGTGGGACACTAGAGGGAAAGTGTTaGCCCTGCCTCATGCTGCAA +
Preference number: 3 (lower is better)
Translates to: EVHILPNVLNKPLNSCGTLEGKC*PCLMLQ
Trigger: TTGCAGCATGAGGCAGGGCAAACACTTTCCCTCTAG...TGTCCCACAACTATTAAGTGGTTTATTAAGTACATTAGGCAGAATGTGCACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR CAA 90 bp CACCTTTACCCGAAATACTTTAAAATGCAAAGCCAATTGCCACCTCCAATTGCTAAAGGGGAGAAGGGTTaGATTTTGTCCCTAAAGTGC +
Preference number: 3 (lower is better)
Translates to: HLYPKYFKMQSQLPPPIAKGEKG*ILSLKC
Trigger: GCACTTTAGGGACAAAATCAAACCCTTCTCCCCTTT...AGCAATTGGAGGTGGCAATTGGCTTTGCATTTTAAAGTATTTCGGGTAAAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR CAA 90 bp TATTATTACTGTGTTACCATCATTATCTTTCCTCTAGAGCAGCAGTGTCAAATGGGCCAGGCTGCTTGCTaGGTACAGGCTTGTATTTCA +
Preference number: 3 (lower is better)
Translates to: YYYCVTIIIFPLEQQCQMGQAAC*VQACIS
Trigger: TGAAATACAAGCCTGTACCAAGCAAGCAGCCTGGCC...CATTTGACACTGCTGCTCTAGAGGAAAGATAATGATGGTAACACAGTAATAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR CAA 90 bp AATACTTTAAAATGCAAAGCCAATTGCCACCTCCAATTGCTGAACCTCAAAAAGGATTCTGGGTATGGCTaGGGCTGTCCACATAGCATT +
Preference number: 3 (lower is better)
Translates to: NTLKCKANCHLQLLNLKKDSGYG*GCPHSI
Trigger: AATGCTATGTGGACAGCCCAAGCCATACCCAGAATC...CTTTTTGAGGTTCAGCAATTGGAGGTGGCAATTGGCTTTGCATTTTAAAGTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR CAA 90 bp TATTATTACTGTGTTACCATCATTATCTTTCCTCTAGAGCAGCAGTGTCAAATGATGTCCCTACATGGATaGAGGGCTGTCTTTGAGGGA +
Preference number: 3 (lower is better)
Translates to: YYYCVTIIIFPLEQQCQMMSLHG*RAVFEG
Trigger: TCCCTCAAAGACAGCCCTCAATCCATGTAGGGACAT...CATTTGACACTGCTGCTCTAGAGGAAAGATAATGATGGTAACACAGTAATAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR CAA 90 bp TATTATTACTGTGTTACCATCATTATCTTTCCTCTAGAGCAGCAGTGTCAAATGTTGGTTACCACATATTaGCTAATACCTGTGTGGGGC +
Preference number: 3 (lower is better)
Translates to: YYYCVTIIIFPLEQQCQMLVTTY*LIPVWG
Trigger: GCCCCACACAGGTATTAGCAAATATGTGGTAACCAA...CATTTGACACTGCTGCTCTAGAGGAAAGATAATGATGGTAACACAGTAATAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR-3UTR CAA 90 bp AATACTTTAAAATGCAAAGCCAATTGCCACCTCCAATTGCTGAACCTCAAAAAGCCAAGGCCTAAAACCTaGGTTACCACATATTTGCTA +
Preference number: 3 (lower is better)
Translates to: NTLKCKANCHLQLLNLKKPRPKT*VTTYLL
Trigger: TAGCAAATATGTGGTAACCAAGGTTTTAGGCCTTGG...CTTTTTGAGGTTCAGCAATTGGAGGTGGCAATTGGCTTTGCATTTTAAAGTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR CCA 72 bp TGTAAAAAGAACTCTCCTGAAGCAAATACTCAACTATaGTATTTGCCATGGCCAAACAGAAATTATAAAGAC +
Preference number: 3 (lower is better)
Translates to: CKKNSPEANTQL*YLPWPNRNYKD
Trigger: GTCTTTATAATTTCTGTTTGGCCATGGCAAATACCATAGTTGAGTATTTGCTTCAGGAGAGTTCTTTTTACA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR TCA 90 bp AGGCCCCTGCTGCTGTTGTGGTATAGGAACAGAGTCCAGAGAGAACAACTGGGCGTGGGAGTGGCTCTCTaGGGTGCAGGAGGCCATGGT +
Preference number: 4 (lower is better)
Translates to: RPLLLLWYRNRVQREQLGVGVAL*GAGGHG
Trigger: ACCATGGCCTCCTGCACCTCAGAGAGCCACTCCCAC...GCCCAGTTGTTCTCTCTGGACTCTGTTCCTATACCACAACAGCAGCAGGGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp AGGCCCCTGCTGCTGTTGTGGTATAGGAACAGAGTCCAGAGAGAACAACTGGGCCCAGGACCACACCGTTaGCAGGTGACACACCGTCCC +
Preference number: 4 (lower is better)
Translates to: RPLLLLWYRNRVQREQLGPGPHR*QVTHRP
Trigger: GGGACGGTGTGTCACCTGCCAACGGTGTGGTCCTGG...GCCCAGTTGTTCTCTCTGGACTCTGTTCCTATACCACAACAGCAGCAGGGGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp TACAGGGTGAGGCCCCAGGGATCTAGAGGGAAAGTGTTTGCCCTGCCTCATGCTCACTGGTCTCCTTGCTaGGTGGCACGGGGAAGAGAG +
Preference number: 4 (lower is better)
Translates to: YRVRPQGSRGKVFALPHAHWSPC*VARGRE
Trigger: CTCTCTTCCCCGTGCCACCCAGCAAGGAGACCAGTG...AGCATGAGGCAGGGCAAACACTTTCCCTCTAGATCCCTGGGGCCTCACCCTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR TCA 90 bp AGCAGCAGTGTCAAATGTGGGCTTGAACCACTGCCAGCCACATGGCAACCTTTGGTGGGAGTGGCTCTCTaGGGTGCAGGAGGCCATGGT +
Preference number: 4 (lower is better)
Translates to: SSSVKCGLEPLPATWQPLVGVAL*GAGGHG
Trigger: ACCATGGCCTCCTGCACCTCAGAGAGCCACTCCCAC...CAAAGGTTGCCATGTGGCTGGCAGTGGTTCAAGCCCACATTTGACACTGCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR GCA 90 bp AGGCCCCTGCTGCTGTTGTGGTATAGGAACAGAGTCCAGAGAGAACAACTGGGCGAGGAGGGCAGGCTGTaGAGTAGGCATCTCCACCCT +
Preference number: 4 (lower is better)
Translates to: RPLLLLWYRNRVQREQLGEEGRL*SRHLHP
Trigger: AGGGTGGAGATGCCTACTGCACAGCCTGCCCTCCTC...GCCCAGTTGTTCTCTCTGGACTCTGTTCCTATACCACAACAGCAGCAGGGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR GCA 90 bp AGGCCCCTGCTGCTGTTGTGGTATAGGAACAGAGTCCAGAGAGAACAACTGGGCGCTTCGTGCACGGGATaGACTCTTGGTCCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: RPLLLLWYRNRVQREQLGASCTG*TLGPAG
Trigger: GCCTGCAGGACCAAGAGTGCATCCCGTGCACGAAGC...GCCCAGTTGTTCTCTCTGGACTCTGTTCCTATACCACAACAGCAGCAGGGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR GCA 90 bp TACAGGGTGAGGCCCCAGGGATCTAGAGGGAAAGTGTTTGCCCTGCCTCATGCTTGGGGGTCTGCTTCGTaGACGGGATGCACTCTTGGT +
Preference number: 4 (lower is better)
Translates to: YRVRPQGSRGKVFALPHAWGSAS*TGCTLG
Trigger: ACCAAGAGTGCATCCCGTGCACGAAGCAGACCCCCA...AGCATGAGGCAGGGCAAACACTTTCCCTCTAGATCCCTGGGGCCTCACCCTGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR GCA 90 bp AGGCCCCTGCTGCTGTTGTGGTATAGGAACAGAGTCCAGAGAGAACAACTGGGCACAACTGGGCAAGGCTaGCAGGGGCCCAAGAGACCT +
Preference number: 4 (lower is better)
Translates to: RPLLLLWYRNRVQREQLGTTGQG*QGPKRP
Trigger: AGGTCTCTTGGGCCCCTGGCAGCCTTGCCCAGTTGT...GCCCAGTTGTTCTCTCTGGACTCTGTTCCTATACCACAACAGCAGCAGGGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp AGGCCCCTGCTGCTGTTGTGGTATAGGAACAGAGTCCAGAGAGAACAACTGGGCCATTCGATGGGGCTGTaGACCCAGTGGGAGTGGCTC +
Preference number: 4 (lower is better)
Translates to: RPLLLLWYRNRVQREQLGHSMGL*TQWEWL
Trigger: GAGCCACTCCCACTGGGTCCACAGCCCCATCGAATG...GCCCAGTTGTTCTCTCTGGACTCTGTTCCTATACCACAACAGCAGCAGGGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR GCA 90 bp TGTTGTGGTATAGGAACAGAGTCCAGAGAGAACAACTGGGCAAGGCTGCCAGGGGCTTCGTGCACGGGATaGACTCTTGGTCCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: CCGIGTESRENNWARLPGASCTG*TLGPAG
Trigger: GCCTGCAGGACCAAGAGTGCATCCCGTGCACGAAGC...CCCTGGCAGCCTTGCCCAGTTGTTCTCTCTGGACTCTGTTCCTATACCACAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR GCA 90 bp AGGCCCCTGCTGCTGTTGTGGTATAGGAACAGAGTCCAGAGAGAACAACTGGGCTGGGGGTCTGCTTCGTaGACGGGATGCACTCTTGGT +
Preference number: 4 (lower is better)
Translates to: RPLLLLWYRNRVQREQLGWGSAS*TGCTLG
Trigger: ACCAAGAGTGCATCCCGTGCACGAAGCAGACCCCCA...GCCCAGTTGTTCTCTCTGGACTCTGTTCCTATACCACAACAGCAGCAGGGGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR GCA 90 bp TGTTGTGGTATAGGAACAGAGTCCAGAGAGAACAACTGGGCAAGGCTGCCAGGGTCAGAGGTGGGGGTCTaGTTCGTGCACGGGATGCAC +
Preference number: 4 (lower is better)
Translates to: CCGIGTESRENNWARLPGSEVGV*FVHGMH
Trigger: GTGCATCCCGTGCACGAAGCAGACCCCCACCTCTGA...CCCTGGCAGCCTTGCCCAGTTGTTCTCTCTGGACTCTGTTCCTATACCACAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR GCA 90 bp TGTTGTGGTATAGGAACAGAGTCCAGAGAGAACAACTGGGCAAGGCTGCCAGGGCAGCACTGGTCTCCTTaGTGGGTGGCACGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: CCGIGTESRENNWARLPGQHWSP*WVARGR
Trigger: TCTTCCCCGTGCCACCCAGCAAGGAGACCAGTGCTG...CCCTGGCAGCCTTGCCCAGTTGTTCTCTCTGGACTCTGTTCCTATACCACAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR GCA 90 bp AGGCCCCTGCTGCTGTTGTGGTATAGGAACAGAGTCCAGAGAGAACAACTGGGCGCAGGTCCAGCTCTGTaGATTCGATGGGGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: RPLLLLWYRNRVQREQLGAGPAL*IRWGCG
Trigger: TCCACAGCCCCATCGAATGCACAGAGCTGGACCTGC...GCCCAGTTGTTCTCTCTGGACTCTGTTCCTATACCACAACAGCAGCAGGGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp AGGCCCCTGCTGCTGTTGTGGTATAGGAACAGAGTCCAGAGAGAACAACTGGGCCACGGGATGCACTCTTaGTCCTGCAGGCCTCCAATG +
Preference number: 4 (lower is better)
Translates to: RPLLLLWYRNRVQREQLGHGMHS*SCRPPM
Trigger: CATTGGAGGCCTGCAGGACCAAGAGTGCATCCCGTG...GCCCAGTTGTTCTCTCTGGACTCTGTTCCTATACCACAACAGCAGCAGGGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp AGGCCCCTGCTGCTGTTGTGGTATAGGAACAGAGTCCAGAGAGAACAACTGGGCGGTCTCCTTGCTGGGTaGCACGGGGAAGAGAGATTC +
Preference number: 4 (lower is better)
Translates to: RPLLLLWYRNRVQREQLGGLLAG*HGEERF
Trigger: GAATCTCTCTTCCCCGTGCCACCCAGCAAGGAGACC...GCCCAGTTGTTCTCTCTGGACTCTGTTCCTATACCACAACAGCAGCAGGGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp AGCAGCAGTGTCAAATGTGGGCTTGAACCACTGCCAGCCACATGGCAACCTTTGCACTGGTCTCCTTGCTaGGTGGCACGGGGAAGAGAG +
Preference number: 4 (lower is better)
Translates to: SSSVKCGLEPLPATWQPLHWSPC*VARGRE
Trigger: CTCTCTTCCCCGTGCCACCCAGCAAGGAGACCAGTG...CAAAGGTTGCCATGTGGCTGGCAGTGGTTCAAGCCCACATTTGACACTGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp TGTTGTGGTATAGGAACAGAGTCCAGAGAGAACAACTGGGCAAGGCTGCCAGGGGCTCTGTGCATTCGATaGGGCTGTGGACCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: CCGIGTESRENNWARLPGALCIR*GCGPSG
Trigger: CCCACTGGGTCCACAGCCCCATCGAATGCACAGAGC...CCCTGGCAGCCTTGCCCAGTTGTTCTCTCTGGACTCTGTTCCTATACCACAACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR GCA 90 bp AGCAGCAGTGTCAAATGTGGGCTTGAACCACTGCCAGCCACATGGCAACCTTTGCAGGCTGCTCACCAGTaGAACAAGTGTGGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: SSSVKCGLEPLPATWQPLQAAHQ*NKCGLL
Trigger: CAGGAGGCCACACTTGTTGCACTGGTGAGCAGCCTG...CAAAGGTTGCCATGTGGCTGGCAGTGGTTCAAGCCCACATTTGACACTGCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR GCA 90 bp TGTTGTGGTATAGGAACAGAGTCCAGAGAGAACAACTGGGCAAGGCTGCCAGGGGCAGGTCCAGCTCTGTaGATTCGATGGGGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: CCGIGTESRENNWARLPGAGPAL*IRWGCG
Trigger: TCCACAGCCCCATCGAATGCACAGAGCTGGACCTGC...CCCTGGCAGCCTTGCCCAGTTGTTCTCTCTGGACTCTGTTCCTATACCACAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR GCA 90 bp AGGCCCCTGCTGCTGTTGTGGTATAGGAACAGAGTCCAGAGAGAACAACTGGGCGTGGGCTTGAACCACTaGCAGCCACATGGCAACCTT +
Preference number: 4 (lower is better)
Translates to: RPLLLLWYRNRVQREQLGVGLNH*QPHGNL
Trigger: AAGGTTGCCATGTGGCTGGCAGTGGTTCAAGCCCAC...GCCCAGTTGTTCTCTCTGGACTCTGTTCCTATACCACAACAGCAGCAGGGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp AGCAGCAGTGTCAAATGTGGGCTTGAACCACTGCCAGCCACATGGCAACCTTTGCACGGGATGCACTCTTaGTCCTGCAGGCCTCCAATG +
Preference number: 4 (lower is better)
Translates to: SSSVKCGLEPLPATWQPLHGMHS*SCRPPM
Trigger: CATTGGAGGCCTGCAGGACCAAGAGTGCATCCCGTG...CAAAGGTTGCCATGTGGCTGGCAGTGGTTCAAGCCCACATTTGACACTGCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR CAA 72 bp TGTGGGCTTGAACCACTGCCAGCCACATGGCAACCTTaGAACACCTGCAGCCTGCTGAAGCCAAATCATCCC +
Preference number: 4 (lower is better)
Translates to: CGLEPLPATWQP*NTCSLLKPNHP
Trigger: GGGATGATTTGGCTTCAGCAGGCTGCAGGTGTTCAAAGGTTGCCATGTGGCTGGCAGTGGTTCAAGCCCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR TCA 90 bp AGCAGCAGTGTCAAATGTGGGCTTGAACCACTGCCAGCCACATGGCAACCTTTGAACTGGAAGGCACATTaGACCTCAGAGGTGGGGGTC +
Preference number: 4 (lower is better)
Translates to: SSSVKCGLEPLPATWQPLNWKAH*TSEVGV
Trigger: GACCCCCACCTCTGAGGTTCAATGTGCCTTCCAGTT...CAAAGGTTGCCATGTGGCTGGCAGTGGTTCAAGCCCACATTTGACACTGCTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR TCA 90 bp TGTTGTGGTATAGGAACAGAGTCCAGAGAGAACAACTGGGCAAGGCTGCCAGGGCTTCAAAGGGCACATTaGGCTCCAGCCTGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: CCGIGTESRENNWARLPGLQRAH*APACLQ
Trigger: CTGGAGACAGGCTGGAGCTCAATGTGCCCTTTGAAG...CCCTGGCAGCCTTGCCCAGTTGTTCTCTCTGGACTCTGTTCCTATACCACAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR TCA 90 bp AGCAGCAGTGTCAAATGTGGGCTTGAACCACTGCCAGCCACATGGCAACCTTTGACACCTGCAGCCTGCTaGAGCCAAATCATCCCCTGT +
Preference number: 4 (lower is better)
Translates to: SSSVKCGLEPLPATWQPLTPAAC*SQIIPC
Trigger: ACAGGGGATGATTTGGCTTCAGCAGGCTGCAGGTGT...CAAAGGTTGCCATGTGGCTGGCAGTGGTTCAAGCCCACATTTGACACTGCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR TCA 90 bp AGGCCCCTGCTGCTGTTGTGGTATAGGAACAGAGTCCAGAGAGAACAACTGGGCTGTCAAATGTGGGCTTaGACCACTGCCAGCCACATG +
Preference number: 4 (lower is better)
Translates to: RPLLLLWYRNRVQREQLGCQMWA*TTASHM
Trigger: CATGTGGCTGGCAGTGGTTCAAGCCCACATTTGACA...GCCCAGTTGTTCTCTCTGGACTCTGTTCCTATACCACAACAGCAGCAGGGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR GCA 90 bp AGCAGCAGTGTCAAATGTGGGCTTGAACCACTGCCAGCCACATGGCAACCTTTGATGCACTCTTGGTCCTaGAGGCCTCCAATGCGTGTC +
Preference number: 4 (lower is better)
Translates to: SSSVKCGLEPLPATWQPLMHSWS*RPPMRV
Trigger: GACACGCATTGGAGGCCTGCAGGACCAAGAGTGCAT...CAAAGGTTGCCATGTGGCTGGCAGTGGTTCAAGCCCACATTTGACACTGCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp GACAGGGCTGTATGTTGTAGAGGGGTATGCTGTAGTGCTGAATCCTTTCCTAACGGGCTGTGGACCCAGTaGGAGTGGCTCTCTGAGGTG +
Preference number: 4 (lower is better)
Translates to: DRAVCCRGVCCSAESFPNGLWTQ*EWLSEV
Trigger: CACCTCAGAGAGCCACTCCCACTGGGTCCACAGCCC...GTTAGGAAAGGATTCAGCACTACAGCATACCCCTCTACAACATACAGCCCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp AGGCCCCTGCTGCTGTTGTGGTATAGGAACAGAGTCCAGAGAGAACAACTGGGCCCCCTGCTGCTGTTGTaGTATAGGAACAGAGTCCAG +
Preference number: 4 (lower is better)
Translates to: RPLLLLWYRNRVQREQLGPLLLL*YRNRVQ
Trigger: CTGGACTCTGTTCCTATACCACAACAGCAGCAGGGG...GCCCAGTTGTTCTCTCTGGACTCTGTTCCTATACCACAACAGCAGCAGGGGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR TCA 90 bp AGCAGCAGTGTCAAATGTGGGCTTGAACCACTGCCAGCCACATGGCAACCTTTGTGTCAAATGTGGGCTTaGACCACTGCCAGCCACATG +
Preference number: 4 (lower is better)
Translates to: SSSVKCGLEPLPATWQPLCQMWA*TTASHM
Trigger: CATGTGGCTGGCAGTGGTTCAAGCCCACATTTGACA...CAAAGGTTGCCATGTGGCTGGCAGTGGTTCAAGCCCACATTTGACACTGCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR GCA 90 bp GACAGGGCTGTATGTTGTAGAGGGGTATGCTGTAGTGCTGAATCCTTTCCTAACGAGGAGGGCAGGCTGTaGAGTAGGCATCTCCACCCT +
Preference number: 4 (lower is better)
Translates to: DRAVCCRGVCCSAESFPNEEGRL*SRHLHP
Trigger: AGGGTGGAGATGCCTACTGCACAGCCTGCCCTCCTC...GTTAGGAAAGGATTCAGCACTACAGCATACCCCTCTACAACATACAGCCCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR GCA 90 bp CATTATCTTTCCTCTAGAGCAGCAGTGTCAAATGTGGGCTTGAACCACTGCCAGGAGGAGGGCAGGCTGTaGAGTAGGCATCTCCACCCT +
Preference number: 4 (lower is better)
Translates to: HYLSSRAAVSNVGLNHCQEEGRL*SRHLHP
Trigger: AGGGTGGAGATGCCTACTGCACAGCCTGCCCTCCTC...CTGGCAGTGGTTCAAGCCCACATTTGACACTGCTGCTCTAGAGGAAAGATAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR GCA 90 bp CATTATCTTTCCTCTAGAGCAGCAGTGTCAAATGTGGGCTTGAACCACTGCCAGGCTTCGTGCACGGGATaGACTCTTGGTCCTGCAGGC +
Preference number: 4 (lower is better)
Translates to: HYLSSRAAVSNVGLNHCQASCTG*TLGPAG
Trigger: GCCTGCAGGACCAAGAGTGCATCCCGTGCACGAAGC...CTGGCAGTGGTTCAAGCCCACATTTGACACTGCTGCTCTAGAGGAAAGATAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR GCA 90 bp TACAGGGTGAGGCCCCAGGGATCTAGAGGGAAAGTGTTTGCCCTGCCTCATGCTATTTCAGGCCCCTGCTaGTGTTGTGGTATAGGAACA +
Preference number: 4 (lower is better)
Translates to: YRVRPQGSRGKVFALPHAISGPC*CCGIGT
Trigger: TGTTCCTATACCACAACAGCAGCAGGGGCCTGAAAT...AGCATGAGGCAGGGCAAACACTTTCCCTCTAGATCCCTGGGGCCTCACCCTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR GCA 90 bp TGTTGTGGTATAGGAACAGAGTCCAGAGAGAACAACTGGGCAAGGCTGCCAGGGCTGTCTTTGAGGGACTaGTGTGGGGTAGTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: CCGIGTESRENNWARLPGLSLRD*CGVVWG
Trigger: TCCCCAAACTACCCCACAGCAGTCCCTCAAAGACAG...CCCTGGCAGCCTTGCCCAGTTGTTCTCTCTGGACTCTGTTCCTATACCACAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp CATTATCTTTCCTCTAGAGCAGCAGTGTCAAATGTGGGCTTGAACCACTGCCAGCCAGTGCAACAAGTGTaGCCTCCTGAGGGGGCACTG +
Preference number: 4 (lower is better)
Translates to: HYLSSRAAVSNVGLNHCQPVQQV*PPEGAL
Trigger: CAGTGCCCCCTCAGGAGGCCACACTTGTTGCACTGG...CTGGCAGTGGTTCAAGCCCACATTTGACACTGCTGCTCTAGAGGAAAGATAATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp GACAGGGCTGTATGTTGTAGAGGGGTATGCTGTAGTGCTGAATCCTTTCCTAACCCAGTGCAACAAGTGTaGCCTCCTGAGGGGGCACTG +
Preference number: 4 (lower is better)
Translates to: DRAVCCRGVCCSAESFPNPVQQV*PPEGAL
Trigger: CAGTGCCCCCTCAGGAGGCCACACTTGTTGCACTGG...GTTAGGAAAGGATTCAGCACTACAGCATACCCCTCTACAACATACAGCCCTGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp GACAGGGCTGTATGTTGTAGAGGGGTATGCTGTAGTGCTGAATCCTTTCCTAACGCTCTGTGCATTCGATaGGGCTGTGGACCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: DRAVCCRGVCCSAESFPNALCIR*GCGPSG
Trigger: CCCACTGGGTCCACAGCCCCATCGAATGCACAGAGC...GTTAGGAAAGGATTCAGCACTACAGCATACCCCTCTACAACATACAGCCCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp AGCAGCAGTGTCAAATGTGGGCTTGAACCACTGCCAGCCACATGGCAACCTTTGTTGCTAATACCTGTGTaGGGCCAGGCTGCTTGCTTG +
Preference number: 4 (lower is better)
Translates to: SSSVKCGLEPLPATWQPLLLIPV*GQAACL
Trigger: CAAGCAAGCAGCCTGGCCCCACACAGGTATTAGCAA...CAAAGGTTGCCATGTGGCTGGCAGTGGTTCAAGCCCACATTTGACACTGCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR TCA 90 bp GTCCCTAAAGTGCTAGGTAGATGTGCCAACACAATTTTGAGAGGCTTACCTGACCACACCGTTGGCAGGTaGCACACCGTCCCCATTGGT +
Preference number: 4 (lower is better)
Translates to: VPKVLGRCANTILRGLPDHTVGR*HTVPIG
Trigger: ACCAATGGGGACGGTGTGTCACCTGCCAACGGTGTG...GTCAGGTAAGCCTCTCAAAATTGTGTTGGCACATCTACCTAGCACTTTAGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR TCA 90 bp TACAGGGTGAGGCCCCAGGGATCTAGAGGGAAAGTGTTTGCCCTGCCTCATGCTAAGTTGGAATTAAGGTaGTTCTGGGTATGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: YRVRPQGSRGKVFALPHAKLELR*FWVWLG
Trigger: CCCAAGCCATACCCAGAATCACCTTAATTCCAACTT...AGCATGAGGCAGGGCAAACACTTTCCCTCTAGATCCCTGGGGCCTCACCCTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR GCA 90 bp GTCCCTAAAGTGCTAGGTAGATGTGCCAACACAATTTTGAGAGGCTTACCTGACTCAGAGGTGGGGGTCTaGTTCGTGCACGGGATGCAC +
Preference number: 4 (lower is better)
Translates to: VPKVLGRCANTILRGLPDSEVGV*FVHGMH
Trigger: GTGCATCCCGTGCACGAAGCAGACCCCCACCTCTGA...GTCAGGTAAGCCTCTCAAAATTGTGTTGGCACATCTACCTAGCACTTTAGGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR GCA 90 bp CATTATCTTTCCTCTAGAGCAGCAGTGTCAAATGTGGGCTTGAACCACTGCCAGGCAGGTCCAGCTCTGTaGATTCGATGGGGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: HYLSSRAAVSNVGLNHCQAGPAL*IRWGCG
Trigger: TCCACAGCCCCATCGAATGCACAGAGCTGGACCTGC...CTGGCAGTGGTTCAAGCCCACATTTGACACTGCTGCTCTAGAGGAAAGATAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR GCA 90 bp TGTTGTGGTATAGGAACAGAGTCCAGAGAGAACAACTGGGCAAGGCTGCCAGGGCACATTTCAGGCCCCTaGTGCTGTTGTGGTATAGGA +
Preference number: 4 (lower is better)
Translates to: CCGIGTESRENNWARLPGHISGP*CCCGIG
Trigger: TCCTATACCACAACAGCAGCAGGGGCCTGAAATGTG...CCCTGGCAGCCTTGCCCAGTTGTTCTCTCTGGACTCTGTTCCTATACCACAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR GCA 90 bp AGGCCCCTGCTGCTGTTGTGGTATAGGAACAGAGTCCAGAGAGAACAACTGGGCCAACCTTTGAACACCTaGAGCCTGCTGAAGCCAAAT +
Preference number: 4 (lower is better)
Translates to: RPLLLLWYRNRVQREQLGQPLNT*SLLKPN
Trigger: ATTTGGCTTCAGCAGGCTGCAGGTGTTCAAAGGTTG...GCCCAGTTGTTCTCTCTGGACTCTGTTCCTATACCACAACAGCAGCAGGGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp GACAGGGCTGTATGTTGTAGAGGGGTATGCTGTAGTGCTGAATCCTTTCCTAACCACGGGATGCACTCTTaGTCCTGCAGGCCTCCAATG +
Preference number: 4 (lower is better)
Translates to: DRAVCCRGVCCSAESFPNHGMHS*SCRPPM
Trigger: CATTGGAGGCCTGCAGGACCAAGAGTGCATCCCGTG...GTTAGGAAAGGATTCAGCACTACAGCATACCCCTCTACAACATACAGCCCTGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp GACAGGGCTGTATGTTGTAGAGGGGTATGCTGTAGTGCTGAATCCTTTCCTAACCCTGAGGGGGCACTGTaGGTGTATCTGCCTCCACTA +
Preference number: 4 (lower is better)
Translates to: DRAVCCRGVCCSAESFPNPEGAL*VYLPPL
Trigger: TAGTGGAGGCAGATACACCCACAGTGCCCCCTCAGG...GTTAGGAAAGGATTCAGCACTACAGCATACCCCTCTACAACATACAGCCCTGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp GTCCCTAAAGTGCTAGGTAGATGTGCCAACACAATTTTGAGAGGCTTACCTGACCATTCGATGGGGCTGTaGACCCAGTGGGAGTGGCTC +
Preference number: 4 (lower is better)
Translates to: VPKVLGRCANTILRGLPDHSMGL*TQWEWL
Trigger: GAGCCACTCCCACTGGGTCCACAGCCCCATCGAATG...GTCAGGTAAGCCTCTCAAAATTGTGTTGGCACATCTACCTAGCACTTTAGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp TACAGGGTGAGGCCCCAGGGATCTAGAGGGAAAGTGTTTGCCCTGCCTCATGCTCATGAATGTGGAATCTaGCTCCCCAGACTACAAAAG +
Preference number: 4 (lower is better)
Translates to: YRVRPQGSRGKVFALPHAHECGI*LPRLQK
Trigger: CTTTTGTAGTCTGGGGAGCCAGATTCCACATTCATG...AGCATGAGGCAGGGCAAACACTTTCCCTCTAGATCCCTGGGGCCTCACCCTGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp AGGCCCCTGCTGCTGTTGTGGTATAGGAACAGAGTCCAGAGAGAACAACTGGGCAGTAATCTGATCAATTaGTTGCCCCAGGGGCCCTTA +
Preference number: 4 (lower is better)
Translates to: RPLLLLWYRNRVQREQLGSNLIN*LPQGPL
Trigger: TAAGGGCCCCTGGGGCAACCAATTGATCAGATTACT...GCCCAGTTGTTCTCTCTGGACTCTGTTCCTATACCACAACAGCAGCAGGGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp AGGCCCCTGCTGCTGTTGTGGTATAGGAACAGAGTCCAGAGAGAACAACTGGGCGTTGGTAGAGAGGAGTaGGACAGGAGGGATTATGAT +
Preference number: 4 (lower is better)
Translates to: RPLLLLWYRNRVQREQLGVGREE*DRRDYD
Trigger: ATCATAATCCCTCCTGTCCCACTCCTCTCTACCAAC...GCCCAGTTGTTCTCTCTGGACTCTGTTCCTATACCACAACAGCAGCAGGGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR TCA 90 bp AATAGAAAGAGGCATACTCAGATGTCCCTACATGGATTGAGGGCTGTCTTTGAGCACACCGTTGGCAGGTaGCACACCGTCCCCATTGGT +
Preference number: 4 (lower is better)
Translates to: NRKRHTQMSLHGLRAVFEHTVGR*HTVPIG
Trigger: ACCAATGGGGACGGTGTGTCACCTGCCAACGGTGTG...CTCAAAGACAGCCCTCAATCCATGTAGGGACATCTGAGTATGCCTCTTTCTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR TCA 90 bp TGTTGTGGTATAGGAACAGAGTCCAGAGAGAACAACTGGGCAAGGCTGCCAGGGGTGCAGTTGACCTTCTaGACACGATTGATGACAGCA +
Preference number: 4 (lower is better)
Translates to: CCGIGTESRENNWARLPGVQLTF*TRLMTA
Trigger: TGCTGTCATCAATCGTGTTCAGAAGGTCAACTGCAC...CCCTGGCAGCCTTGCCCAGTTGTTCTCTCTGGACTCTGTTCCTATACCACAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR TCA 90 bp GACAGGGCTGTATGTTGTAGAGGGGTATGCTGTAGTGCTGAATCCTTTCCTAACCTTCAAAGGGCACATTaGGCTCCAGCCTGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: DRAVCCRGVCCSAESFPNLQRAH*APACLQ
Trigger: CTGGAGACAGGCTGGAGCTCAATGTGCCCTTTGAAG...GTTAGGAAAGGATTCAGCACTACAGCATACCCCTCTACAACATACAGCCCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR TCA 90 bp AGGCCCCTGCTGCTGTTGTGGTATAGGAACAGAGTCCAGAGAGAACAACTGGGCCCAAAAATGCAGACATaGAAACCCTACCCCATTCAC +
Preference number: 4 (lower is better)
Translates to: RPLLLLWYRNRVQREQLGPKMQT*KPYPIH
Trigger: GTGAATGGGGTAGGGTTTTCATGTCTGCATTTTTGG...GCCCAGTTGTTCTCTCTGGACTCTGTTCCTATACCACAACAGCAGCAGGGGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR TCA 90 bp AGGCCCCTGCTGCTGTTGTGGTATAGGAACAGAGTCCAGAGAGAACAACTGGGCTGCAATGCAGCAGTCTaGGACATGAACTTGGGAATT +
Preference number: 4 (lower is better)
Translates to: RPLLLLWYRNRVQREQLGCNAAV*DMNLGI
Trigger: AATTCCCAAGTTCATGTCTCAGACTGCTGCATTGCA...GCCCAGTTGTTCTCTCTGGACTCTGTTCCTATACCACAACAGCAGCAGGGGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR TCA 90 bp AGGCCCCTGCTGCTGTTGTGGTATAGGAACAGAGTCCAGAGAGAACAACTGGGCGCCACCTCCAATTGCTaGACCTCAAAAAGTTGGAAT +
Preference number: 4 (lower is better)
Translates to: RPLLLLWYRNRVQREQLGATSNC*TSKSWN
Trigger: ATTCCAACTTTTTGAGGTTCAGCAATTGGAGGTGGC...GCCCAGTTGTTCTCTCTGGACTCTGTTCCTATACCACAACAGCAGCAGGGGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR GCA 90 bp CATTATCTTTCCTCTAGAGCAGCAGTGTCAAATGTGGGCTTGAACCACTGCCAGATGCACTCTTGGTCCTaGAGGCCTCCAATGCGTGTC +
Preference number: 4 (lower is better)
Translates to: HYLSSRAAVSNVGLNHCQMHSWS*RPPMRV
Trigger: GACACGCATTGGAGGCCTGCAGGACCAAGAGTGCAT...CTGGCAGTGGTTCAAGCCCACATTTGACACTGCTGCTCTAGAGGAAAGATAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR GCA 90 bp GTCCCTAAAGTGCTAGGTAGATGTGCCAACACAATTTTGAGAGGCTTACCTGACTGGGGGTCTGCTTCGTaGACGGGATGCACTCTTGGT +
Preference number: 4 (lower is better)
Translates to: VPKVLGRCANTILRGLPDWGSAS*TGCTLG
Trigger: ACCAAGAGTGCATCCCGTGCACGAAGCAGACCCCCA...GTCAGGTAAGCCTCTCAAAATTGTGTTGGCACATCTACCTAGCACTTTAGGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR GCA 90 bp GTCCCTAAAGTGCTAGGTAGATGTGCCAACACAATTTTGAGAGGCTTACCTGACCAGGCTGCTCACCAGTaGAACAAGTGTGGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: VPKVLGRCANTILRGLPDQAAHQ*NKCGLL
Trigger: CAGGAGGCCACACTTGTTGCACTGGTGAGCAGCCTG...GTCAGGTAAGCCTCTCAAAATTGTGTTGGCACATCTACCTAGCACTTTAGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR GCA 90 bp CATTATCTTTCCTCTAGAGCAGCAGTGTCAAATGTGGGCTTGAACCACTGCCAGCCAGCCTGTCTCCAGTaGTTTCGACTGTGTTTCCCC +
Preference number: 4 (lower is better)
Translates to: HYLSSRAAVSNVGLNHCQPACLQ*FRLCFP
Trigger: GGGGAAACACAGTCGAAAGCACTGGAGACAGGCTGG...CTGGCAGTGGTTCAAGCCCACATTTGACACTGCTGCTCTAGAGGAAAGATAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR GCA 90 bp GACAGGGCTGTATGTTGTAGAGGGGTATGCTGTAGTGCTGAATCCTTTCCTAACCGAGTAGATGGCTCTTaGTCCCAAATGGGACTCCGG +
Preference number: 4 (lower is better)
Translates to: DRAVCCRGVCCSAESFPNRVDGS*SQMGLR
Trigger: CCGGAGTCCCATTTGGGAGCAAGAGCCATCTACTCG...GTTAGGAAAGGATTCAGCACTACAGCATACCCCTCTACAACATACAGCCCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374719.8
CDS-3UTR GCA 90 bp AATAGAAAGAGGCATACTCAGATGTCCCTACATGGATTGAGGGCTGTCTTTGAGACAACTGGGCAAGGCTaGCAGGGGCCCAAGAGACCT +
Preference number: 4 (lower is better)
Translates to: NRKRHTQMSLHGLRAVFETTGQG*QGPKRP
Trigger: AGGTCTCTTGGGCCCCTGGCAGCCTTGCCCAGTTGT...CTCAAAGACAGCCCTCAATCCATGTAGGGACATCTGAGTATGCCTCTTTCTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR GCA 90 bp AGCAGCAGTGTCAAATGTGGGCTTGAACCACTGCCAGCCACATGGCAACCTTTGTGCCTCATGCTGCAATaGAGCAGTCTGAGACATGAA +
Preference number: 4 (lower is better)
Translates to: SSSVKCGLEPLPATWQPLCLMLQ*SSLRHE
Trigger: TTCATGTCTCAGACTGCTGCATTGCAGCATGAGGCA...CAAAGGTTGCCATGTGGCTGGCAGTGGTTCAAGCCCACATTTGACACTGCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR GCA 90 bp GACAGGGCTGTATGTTGTAGAGGGGTATGCTGTAGTGCTGAATCCTTTCCTAACGTGGGCTTGAACCACTaGCAGCCACATGGCAACCTT +
Preference number: 4 (lower is better)
Translates to: DRAVCCRGVCCSAESFPNVGLNH*QPHGNL
Trigger: AAGGTTGCCATGTGGCTGGCAGTGGTTCAAGCCCAC...GTTAGGAAAGGATTCAGCACTACAGCATACCCCTCTACAACATACAGCCCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp CATTATCTTTCCTCTAGAGCAGCAGTGTCAAATGTGGGCTTGAACCACTGCCAGATTGAACCTCAGAGGTaGGGGTCTGCTTCGTGCACG +
Preference number: 4 (lower is better)
Translates to: HYLSSRAAVSNVGLNHCQIEPQR*GSASCT
Trigger: CGTGCACGAAGCAGACCCCCACCTCTGAGGTTCAAT...CTGGCAGTGGTTCAAGCCCACATTTGACACTGCTGCTCTAGAGGAAAGATAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp GTCCCTAAAGTGCTAGGTAGATGTGCCAACACAATTTTGAGAGGCTTACCTGACGGTCTCCTTGCTGGGTaGCACGGGGAAGAGAGATTC +
Preference number: 4 (lower is better)
Translates to: VPKVLGRCANTILRGLPDGLLAG*HGEERF
Trigger: GAATCTCTCTTCCCCGTGCCACCCAGCAAGGAGACC...GTCAGGTAAGCCTCTCAAAATTGTGTTGGCACATCTACCTAGCACTTTAGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp AATAGAAAGAGGCATACTCAGATGTCCCTACATGGATTGAGGGCTGTCTTTGAGTGGACCCAGTGGGAGTaGCTCTCTGAGGTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: NRKRHTQMSLHGLRAVFEWTQWE*LSEVQE
Trigger: CTCCTGCACCTCAGAGAGCCACTCCCACTGGGTCCA...CTCAAAGACAGCCCTCAATCCATGTAGGGACATCTGAGTATGCCTCTTTCTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp GACAGGGCTGTATGTTGTAGAGGGGTATGCTGTAGTGCTGAATCCTTTCCTAACTGCTGTGGGGTAGTTTaGGGAACTCAGGCCCCAGAA +
Preference number: 4 (lower is better)
Translates to: DRAVCCRGVCCSAESFPNCCGVV*GTQAPE
Trigger: TTCTGGGGCCTGAGTTCCCCAAACTACCCCACAGCA...GTTAGGAAAGGATTCAGCACTACAGCATACCCCTCTACAACATACAGCCCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp TGTTGTGGTATAGGAACAGAGTCCAGAGAGAACAACTGGGCAAGGCTGCCAGGGATTCTGGGTATGGCTTaGGCTGTCCACATAGCATTC +
Preference number: 4 (lower is better)
Translates to: CCGIGTESRENNWARLPGILGMA*AVHIAF
Trigger: GAATGCTATGTGGACAGCCCAAGCCATACCCAGAAT...CCCTGGCAGCCTTGCCCAGTTGTTCTCTCTGGACTCTGTTCCTATACCACAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp AGCAGCAGTGTCAAATGTGGGCTTGAACCACTGCCAGCCACATGGCAACCTTTGATTCTGGGTATGGCTTaGGCTGTCCACATAGCATTC +
Preference number: 4 (lower is better)
Translates to: SSSVKCGLEPLPATWQPLILGMA*AVHIAF
Trigger: GAATGCTATGTGGACAGCCCAAGCCATACCCAGAAT...CAAAGGTTGCCATGTGGCTGGCAGTGGTTCAAGCCCACATTTGACACTGCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR TCA 90 bp TGTTGTGGTATAGGAACAGAGTCCAGAGAGAACAACTGGGCAAGGCTGCCAGGGTTAAGTGGCTGGGTCTaGAAGATGTTCTCACTCACT +
Preference number: 4 (lower is better)
Translates to: CCGIGTESRENNWARLPGLSGWV*KMFSLT
Trigger: AGTGAGTGAGAACATCTTTCAGACCCAGCCACTTAA...CCCTGGCAGCCTTGCCCAGTTGTTCTCTCTGGACTCTGTTCCTATACCACAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR TCA 90 bp CATTATCTTTCCTCTAGAGCAGCAGTGTCAAATGTGGGCTTGAACCACTGCCAGTGTCTGGTAGTCCCATaGATGTGGAATCTGGCTCCC +
Preference number: 4 (lower is better)
Translates to: HYLSSRAAVSNVGLNHCQCLVVP*MWNLAP
Trigger: GGGAGCCAGATTCCACATTCATGGGACTACCAGACA...CTGGCAGTGGTTCAAGCCCACATTTGACACTGCTGCTCTAGAGGAAAGATAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR TCA 90 bp AGCAGCAGTGTCAAATGTGGGCTTGAACCACTGCCAGCCACATGGCAACCTTTGTGCAATGCAGCAGTCTaGGACATGAACTTGGGAATT +
Preference number: 4 (lower is better)
Translates to: SSSVKCGLEPLPATWQPLCNAAV*DMNLGI
Trigger: AATTCCCAAGTTCATGTCTCAGACTGCTGCATTGCA...CAAAGGTTGCCATGTGGCTGGCAGTGGTTCAAGCCCACATTTGACACTGCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR TCA 90 bp CATTATCTTTCCTCTAGAGCAGCAGTGTCAAATGTGGGCTTGAACCACTGCCAGTGTCCCTACATGGATTaGGGGCTGTCTTTGAGGGAC +
Preference number: 4 (lower is better)
Translates to: HYLSSRAAVSNVGLNHCQCPYMD*GLSLRD
Trigger: GTCCCTCAAAGACAGCCCTCAATCCATGTAGGGACA...CTGGCAGTGGTTCAAGCCCACATTTGACACTGCTGCTCTAGAGGAAAGATAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR TCA 90 bp CATTATCTTTCCTCTAGAGCAGCAGTGTCAAATGTGGGCTTGAACCACTGCCAGTGTCAAATGTGGGCTTaGACCACTGCCAGCCACATG +
Preference number: 4 (lower is better)
Translates to: HYLSSRAAVSNVGLNHCQCQMWA*TTASHM
Trigger: CATGTGGCTGGCAGTGGTTCAAGCCCACATTTGACA...CTGGCAGTGGTTCAAGCCCACATTTGACACTGCTGCTCTAGAGGAAAGATAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR TCA 90 bp AGCAGCAGTGTCAAATGTGGGCTTGAACCACTGCCAGCCACATGGCAACCTTTGATAGCATTCATGCCATaGGCAAGCACACTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: SSSVKCGLEPLPATWQPLIAFMP*ASTLKK
Trigger: CTTCTTCAGTGTGCTTGCTCATGGCATGAATGCTAT...CAAAGGTTGCCATGTGGCTGGCAGTGGTTCAAGCCCACATTTGACACTGCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR TCA 90 bp TGTTGTGGTATAGGAACAGAGTCCAGAGAGAACAACTGGGCAAGGCTGCCAGGGAAGTTGGAATTAAGGTaGTTCTGGGTATGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: CCGIGTESRENNWARLPGKLELR*FWVWLG
Trigger: CCCAAGCCATACCCAGAATCACCTTAATTCCAACTT...CCCTGGCAGCCTTGCCCAGTTGTTCTCTCTGGACTCTGTTCCTATACCACAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR TCA 90 bp AGGCCCCTGCTGCTGTTGTGGTATAGGAACAGAGTCCAGAGAGAACAACTGGGCAATCAAAGTTCCGCTTaGCTCATTTCACATCCACGT +
Preference number: 4 (lower is better)
Translates to: RPLLLLWYRNRVQREQLGNQSSA*LISHPR
Trigger: ACGTGGATGTGAAATGAGTCAAGCGGAACTTTGATT...GCCCAGTTGTTCTCTCTGGACTCTGTTCCTATACCACAACAGCAGCAGGGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451436.6
CDS-3UTR GCA 90 bp GTCCCTAAAGTGCTAGGTAGATGTGCCAACACAATTTTGAGAGGCTTACCTGACCCTGCAGGCCTCCAATaGGTGTCTTTCGGTAGAACC +
Preference number: 4 (lower is better)
Translates to: VPKVLGRCANTILRGLPDPAGLQ*VSFGRT
Trigger: GGTTCTACCGAAAGACACGCATTGGAGGCCTGCAGG...GTCAGGTAAGCCTCTCAAAATTGTGTTGGCACATCTACCTAGCACTTTAGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR GCA 90 bp CATTATCTTTCCTCTAGAGCAGCAGTGTCAAATGTGGGCTTGAACCACTGCCAGACACCACTAGCAGGCTaGTCACCAGTGCAACAAGTG +
Preference number: 4 (lower is better)
Translates to: HYLSSRAAVSNVGLNHCQTPLAG*SPVQQV
Trigger: CACTTGTTGCACTGGTGAGCAGCCTGCTAGTGGTGT...CTGGCAGTGGTTCAAGCCCACATTTGACACTGCTGCTCTAGAGGAAAGATAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR GCA 90 bp AGACTACAAAAGGGAAGCAAGAAATGCTCCAGATCAGTCCTTGTGAAATGGAGACAGCACTGGTCTCCTTaGTGGGTGGCACGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: RLQKGSKKCSRSVLVKWRQHWSP*WVARGR
Trigger: TCTTCCCCGTGCCACCCAGCAAGGAGACCAGTGCTG...TCTCCATTTCACAAGGACTGATCTGGAGCATTTCTTGCTTCCCTTTTGTAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR GCA 90 bp TGTTGTGGTATAGGAACAGAGTCCAGAGAGAACAACTGGGCAAGGCTGCCAGGGAAGGGAAGCAAGAAATaGTCCAGATCAGTCCTTGTG +
Preference number: 4 (lower is better)
Translates to: CCGIGTESRENNWARLPGKGSKK*SRSVLV
Trigger: CACAAGGACTGATCTGGAGCATTTCTTGCTTCCCTT...CCCTGGCAGCCTTGCCCAGTTGTTCTCTCTGGACTCTGTTCCTATACCACAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR GCA 90 bp CATTATCTTTCCTCTAGAGCAGCAGTGTCAAATGTGGGCTTGAACCACTGCCAGGGAAAGTGTTTGCCCTaGCTCATGCTGCAATGCAGC +
Preference number: 4 (lower is better)
Translates to: HYLSSRAAVSNVGLNHCQGKCLP*LMLQCS
Trigger: GCTGCATTGCAGCATGAGGCAGGGCAAACACTTTCC...CTGGCAGTGGTTCAAGCCCACATTTGACACTGCTGCTCTAGAGGAAAGATAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR GCA 90 bp AGGCCCCTGCTGCTGTTGTGGTATAGGAACAGAGTCCAGAGAGAACAACTGGGCAACCTGGTGATGAAGTaGACATTCTGCCTAATGTAC +
Preference number: 4 (lower is better)
Translates to: RPLLLLWYRNRVQREQLGNLVMK*TFCLMY
Trigger: GTACATTAGGCAGAATGTGCACTTCATCACCAGGTT...GCCCAGTTGTTCTCTCTGGACTCTGTTCCTATACCACAACAGCAGCAGGGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR GCA 90 bp CATTATCTTTCCTCTAGAGCAGCAGTGTCAAATGTGGGCTTGAACCACTGCCAGTGGGGCCAGGCTGCTTaGTTGGTACAGGCTTGTATT +
Preference number: 4 (lower is better)
Translates to: HYLSSRAAVSNVGLNHCQWGQAA*LVQACI
Trigger: AATACAAGCCTGTACCAAGCAAGCAGCCTGGCCCCA...CTGGCAGTGGTTCAAGCCCACATTTGACACTGCTGCTCTAGAGGAAAGATAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR GCA 90 bp AGGCCCCTGCTGCTGTTGTGGTATAGGAACAGAGTCCAGAGAGAACAACTGGGCTGTTGTAGAGGGGTATaGTGTAGTGCTGAATCCTTT +
Preference number: 4 (lower is better)
Translates to: RPLLLLWYRNRVQREQLGCCRGV*CSAESF
Trigger: AAAGGATTCAGCACTACAGCATACCCCTCTACAACA...GCCCAGTTGTTCTCTCTGGACTCTGTTCCTATACCACAACAGCAGCAGGGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp TACAGGGTGAGGCCCCAGGGATCTAGAGGGAAAGTGTTTGCCCTGCCTCATGCTATCAATTTCTCACGCTaGCAATGTCTGTTGAAGAAC +
Preference number: 4 (lower is better)
Translates to: YRVRPQGSRGKVFALPHAINFSR*QCLLKN
Trigger: GTTCTTCAACAGACATTGCCAGCGTGAGAAATTGAT...AGCATGAGGCAGGGCAAACACTTTCCCTCTAGATCCCTGGGGCCTCACCCTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000396050.5
CDS-3UTR CCA 90 bp AGGCCCCTGCTGCTGTTGTGGTATAGGAACAGAGTCCAGAGAGAACAACTGGGCCAGATTGAGGCTAGCTaGTACTGGATCAGAGAAAAT +
Preference number: 4 (lower is better)
Translates to: RPLLLLWYRNRVQREQLGQIEAS*YWIREN
Trigger: ATTTTCTCTGATCCAGTACCAGCTAGCCTCAATCTG...GCCCAGTTGTTCTCTCTGGACTCTGTTCCTATACCACAACAGCAGCAGGGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396050.5
CDS-3UTR CCA 90 bp ATTATTTTCCCAGGCTCCCTCCTGTCAAAATCCAAGTCAAGGTATATGGAGAGATGGACCCAGTGGGAGTaGCTCTCTGAGGTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: IIFPGSLLSKSKSRYMERWTQWE*LSEVQE
Trigger: CTCCTGCACCTCAGAGAGCCACTCCCACTGGGTCCA...TCTCTCCATATACCTTGACTTGGATTTTGACAGGAGGGAGCCTGGGAAAATAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp AGACTACAAAAGGGAAGCAAGAAATGCTCCAGATCAGTCCTTGTGAAATGGAGACATTCGATGGGGCTGTaGACCCAGTGGGAGTGGCTC +
Preference number: 4 (lower is better)
Translates to: RLQKGSKKCSRSVLVKWRHSMGL*TQWEWL
Trigger: GAGCCACTCCCACTGGGTCCACAGCCCCATCGAATG...TCTCCATTTCACAAGGACTGATCTGGAGCATTTCTTGCTTCCCTTTTGTAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp TGTTGTGGTATAGGAACAGAGTCCAGAGAGAACAACTGGGCAAGGCTGCCAGGGCAGTACTCATTTTCTTaGCAATCCATGGTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: CCGIGTESRENNWARLPGQYSFS*QSMVGR
Trigger: CCTTCCCACCATGGATTGCCAAGAAAATGAGTACTG...CCCTGGCAGCCTTGCCCAGTTGTTCTCTCTGGACTCTGTTCCTATACCACAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp AGGCCCCTGCTGCTGTTGTGGTATAGGAACAGAGTCCAGAGAGAACAACTGGGCATTAGAGTTAAGGGCTaGGAACTTCAAAGGGCACAT +
Preference number: 4 (lower is better)
Translates to: RPLLLLWYRNRVQREQLGIRVKG*ELQRAH
Trigger: ATGTGCCCTTTGAAGTTCCCAGCCCTTAACTCTAAT...GCCCAGTTGTTCTCTCTGGACTCTGTTCCTATACCACAACAGCAGCAGGGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp AGACTACAAAAGGGAAGCAAGAAATGCTCCAGATCAGTCCTTGTGAAATGGAGATCCAGAGAGAACAACTaGGCAAGGCTGCCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: RLQKGSKKCSRSVLVKWRSRENN*ARLPGA
Trigger: GGCCCCTGGCAGCCTTGCCCAGTTGTTCTCTCTGGA...TCTCCATTTCACAAGGACTGATCTGGAGCATTTCTTGCTTCCCTTTTGTAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp CATTATCTTTCCTCTAGAGCAGCAGTGTCAAATGTGGGCTTGAACCACTGCCAGCCCCTGCTGCTGTTGTaGTATAGGAACAGAGTCCAG +
Preference number: 4 (lower is better)
Translates to: HYLSSRAAVSNVGLNHCQPLLLL*YRNRVQ
Trigger: CTGGACTCTGTTCCTATACCACAACAGCAGCAGGGG...CTGGCAGTGGTTCAAGCCCACATTTGACACTGCTGCTCTAGAGGAAAGATAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp AGCAGCAGTGTCAAATGTGGGCTTGAACCACTGCCAGCCACATGGCAACCTTTGGGAGAATCAATCCTCTaGTGGGATGGGATAGGATAT +
Preference number: 4 (lower is better)
Translates to: SSSVKCGLEPLPATWQPLGESIL*WDGIGY
Trigger: ATATCCTATCCCATCCCACCAGAGGATTGATTCTCC...CAAAGGTTGCCATGTGGCTGGCAGTGGTTCAAGCCCACATTTGACACTGCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp TGTTGTGGTATAGGAACAGAGTCCAGAGAGAACAACTGGGCAAGGCTGCCAGGGCATGAATGTGGAATCTaGCTCCCCAGACTACAAAAG +
Preference number: 4 (lower is better)
Translates to: CCGIGTESRENNWARLPGHECGI*LPRLQK
Trigger: CTTTTGTAGTCTGGGGAGCCAGATTCCACATTCATG...CCCTGGCAGCCTTGCCCAGTTGTTCTCTCTGGACTCTGTTCCTATACCACAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR TCA 90 bp AATAGAAAGAGGCATACTCAGATGTCCCTACATGGATTGAGGGCTGTCTTTGAGAACTGGAAGGCACATTaGACCTCAGAGGTGGGGGTC +
Preference number: 4 (lower is better)
Translates to: NRKRHTQMSLHGLRAVFENWKAH*TSEVGV
Trigger: GACCCCCACCTCTGAGGTTCAATGTGCCTTCCAGTT...CTCAAAGACAGCCCTCAATCCATGTAGGGACATCTGAGTATGCCTCTTTCTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR TCA 90 bp AATAGAAAGAGGCATACTCAGATGTCCCTACATGGATTGAGGGCTGTCTTTGAGACCTCAAATACAGGGTaGGGCCCCAGGGATCTAGAG +
Preference number: 4 (lower is better)
Translates to: NRKRHTQMSLHGLRAVFETSNTG*GPRDLE
Trigger: CTCTAGATCCCTGGGGCCTCACCCTGTATTTGAGGT...CTCAAAGACAGCCCTCAATCCATGTAGGGACATCTGAGTATGCCTCTTTCTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR TCA 90 bp GTCCCTAAAGTGCTAGGTAGATGTGCCAACACAATTTTGAGAGGCTTACCTGACTGTCCCTACATGGATTaGGGGCTGTCTTTGAGGGAC +
Preference number: 4 (lower is better)
Translates to: VPKVLGRCANTILRGLPDCPYMD*GLSLRD
Trigger: GTCCCTCAAAGACAGCCCTCAATCCATGTAGGGACA...GTCAGGTAAGCCTCTCAAAATTGTGTTGGCACATCTACCTAGCACTTTAGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR TCA 90 bp TGTTGTGGTATAGGAACAGAGTCCAGAGAGAACAACTGGGCAAGGCTGCCAGGGCATGAGCAAGCACACTaGAGAAGTCTTACTCTTTCA +
Preference number: 4 (lower is better)
Translates to: CCGIGTESRENNWARLPGHEQAH*RSLTLS
Trigger: TGAAAGAGTAAGACTTCTTCAGTGTGCTTGCTCATG...CCCTGGCAGCCTTGCCCAGTTGTTCTCTCTGGACTCTGTTCCTATACCACAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR GCA 90 bp AGACTACAAAAGGGAAGCAAGAAATGCTCCAGATCAGTCCTTGTGAAATGGAGACAGGCTGCTCACCAGTaGAACAAGTGTGGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: RLQKGSKKCSRSVLVKWRQAAHQ*NKCGLL
Trigger: CAGGAGGCCACACTTGTTGCACTGGTGAGCAGCCTG...TCTCCATTTCACAAGGACTGATCTGGAGCATTTCTTGCTTCCCTTTTGTAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR GCA 90 bp TGTTGTGGTATAGGAACAGAGTCCAGAGAGAACAACTGGGCAAGGCTGCCAGGGTTATCAGCCTCAAACTaGAGCAAACCTCCTGCAAAT +
Preference number: 4 (lower is better)
Translates to: CCGIGTESRENNWARLPGLSASN*SKPPAN
Trigger: ATTTGCAGGAGGTTTGCTGCAGTTTGAGGCTGATAA...CCCTGGCAGCCTTGCCCAGTTGTTCTCTCTGGACTCTGTTCCTATACCACAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000396050.5
CDS-3UTR GCA 90 bp GTCCCTAAAGTGCTAGGTAGATGTGCCAACACAATTTTGAGAGGCTTACCTGACGGAAAGTGTTTGCCCTaGCTCATGCTGCAATGCAGC +
Preference number: 4 (lower is better)
Translates to: VPKVLGRCANTILRGLPDGKCLP*LMLQCS
Trigger: GCTGCATTGCAGCATGAGGCAGGGCAAACACTTTCC...GTCAGGTAAGCCTCTCAAAATTGTGTTGGCACATCTACCTAGCACTTTAGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR GCA 90 bp GTCCCTAAAGTGCTAGGTAGATGTGCCAACACAATTTTGAGAGGCTTACCTGACTGGGGCCAGGCTGCTTaGTTGGTACAGGCTTGTATT +
Preference number: 4 (lower is better)
Translates to: VPKVLGRCANTILRGLPDWGQAA*LVQACI
Trigger: AATACAAGCCTGTACCAAGCAAGCAGCCTGGCCCCA...GTCAGGTAAGCCTCTCAAAATTGTGTTGGCACATCTACCTAGCACTTTAGGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp AATAGAAAGAGGCATACTCAGATGTCCCTACATGGATTGAGGGCTGTCTTTGAGATTGAACCTCAGAGGTaGGGGTCTGCTTCGTGCACG +
Preference number: 4 (lower is better)
Translates to: NRKRHTQMSLHGLRAVFEIEPQR*GSASCT
Trigger: CGTGCACGAAGCAGACCCCCACCTCTGAGGTTCAAT...CTCAAAGACAGCCCTCAATCCATGTAGGGACATCTGAGTATGCCTCTTTCTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp AGACTACAAAAGGGAAGCAAGAAATGCTCCAGATCAGTCCTTGTGAAATGGAGACCTGAGGGGGCACTGTaGGTGTATCTGCCTCCACTA +
Preference number: 4 (lower is better)
Translates to: RLQKGSKKCSRSVLVKWRPEGAL*VYLPPL
Trigger: TAGTGGAGGCAGATACACCCACAGTGCCCCCTCAGG...TCTCCATTTCACAAGGACTGATCTGGAGCATTTCTTGCTTCCCTTTTGTAGTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp AGACTACAAAAGGGAAGCAAGAAATGCTCCAGATCAGTCCTTGTGAAATGGAGAGGTCTCCTTGCTGGGTaGCACGGGGAAGAGAGATTC +
Preference number: 4 (lower is better)
Translates to: RLQKGSKKCSRSVLVKWRGLLAG*HGEERF
Trigger: GAATCTCTCTTCCCCGTGCCACCCAGCAAGGAGACC...TCTCCATTTCACAAGGACTGATCTGGAGCATTTCTTGCTTCCCTTTTGTAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp CATTATCTTTCCTCTAGAGCAGCAGTGTCAAATGTGGGCTTGAACCACTGCCAGATGTTCTCACTCACTTaGGACTCAGCACTGGTCTCC +
Preference number: 4 (lower is better)
Translates to: HYLSSRAAVSNVGLNHCQMFSLT*DSALVS
Trigger: GGAGACCAGTGCTGAGTCCCAAGTGAGTGAGAACAT...CTGGCAGTGGTTCAAGCCCACATTTGACACTGCTGCTCTAGAGGAAAGATAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp AGGCCCCTGCTGCTGTTGTGGTATAGGAACAGAGTCCAGAGAGAACAACTGGGCCTTGGCAATCCATGGTaGGAAGGAGTATATGAAATT +
Preference number: 4 (lower is better)
Translates to: RPLLLLWYRNRVQREQLGLGNPW*EGVYEI
Trigger: AATTTCATATACTCCTTCCCACCATGGATTGCCAAG...GCCCAGTTGTTCTCTCTGGACTCTGTTCCTATACCACAACAGCAGCAGGGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451436.6
CDS-3UTR TCA 90 bp AGACTACAAAAGGGAAGCAAGAAATGCTCCAGATCAGTCCTTGTGAAATGGAGACTTCAAAGGGCACATTaGGCTCCAGCCTGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: RLQKGSKKCSRSVLVKWRLQRAH*APACLQ
Trigger: CTGGAGACAGGCTGGAGCTCAATGTGCCCTTTGAAG...TCTCCATTTCACAAGGACTGATCTGGAGCATTTCTTGCTTCCCTTTTGTAGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR TCA 90 bp ATTATTTTCCCAGGCTCCCTCCTGTCAAAATCCAAGTCAAGGTATATGGAGAGAACCTCAAATACAGGGTaGGGCCCCAGGGATCTAGAG +
Preference number: 4 (lower is better)
Translates to: IIFPGSLLSKSKSRYMERTSNTG*GPRDLE
Trigger: CTCTAGATCCCTGGGGCCTCACCCTGTATTTGAGGT...TCTCTCCATATACCTTGACTTGGATTTTGACAGGAGGGAGCCTGGGAAAATAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR TCA 90 bp AGGCCCCTGCTGCTGTTGTGGTATAGGAACAGAGTCCAGAGAGAACAACTGGGCAAGCTGGGATTGAATTaGCATTTCAATAGAAAGAGG +
Preference number: 4 (lower is better)
Translates to: RPLLLLWYRNRVQREQLGKLGLN*HFNRKR
Trigger: CCTCTTTCTATTGAAATGTCAATTCAATCCCAGCTT...GCCCAGTTGTTCTCTCTGGACTCTGTTCCTATACCACAACAGCAGCAGGGGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR GCA 90 bp AGACTACAAAAGGGAAGCAAGAAATGCTCCAGATCAGTCCTTGTGAAATGGAGACCTGCAGGCCTCCAATaGGTGTCTTTCGGTAGAACC +
Preference number: 4 (lower is better)
Translates to: RLQKGSKKCSRSVLVKWRPAGLQ*VSFGRT
Trigger: GGTTCTACCGAAAGACACGCATTGGAGGCCTGCAGG...TCTCCATTTCACAAGGACTGATCTGGAGCATTTCTTGCTTCCCTTTTGTAGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR GCA 90 bp CATTATCTTTCCTCTAGAGCAGCAGTGTCAAATGTGGGCTTGAACCACTGCCAGGAGCTGGAAAACTTTTaGAGGTCCAGCTCTGTGCAT +
Preference number: 4 (lower is better)
Translates to: HYLSSRAAVSNVGLNHCQELENF*RSSSVH
Trigger: ATGCACAGAGCTGGACCTGCAAAAGTTTTCCAGCTC...CTGGCAGTGGTTCAAGCCCACATTTGACACTGCTGCTCTAGAGGAAAGATAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR GCA 90 bp GACAGGGCTGTATGTTGTAGAGGGGTATGCTGTAGTGCTGAATCCTTTCCTAACGAGCTGGAAAACTTTTaGAGGTCCAGCTCTGTGCAT +
Preference number: 4 (lower is better)
Translates to: DRAVCCRGVCCSAESFPNELENF*RSSSVH
Trigger: ATGCACAGAGCTGGACCTGCAAAAGTTTTCCAGCTC...GTTAGGAAAGGATTCAGCACTACAGCATACCCCTCTACAACATACAGCCCTGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp CATTATCTTTCCTCTAGAGCAGCAGTGTCAAATGTGGGCTTGAACCACTGCCAGACACACCGTCCCCATTaGTCCCAGTACTCATTTTCT +
Preference number: 4 (lower is better)
Translates to: HYLSSRAAVSNVGLNHCQTHRPH*SQYSFS
Trigger: AGAAAATGAGTACTGGGACCAATGGGGACGGTGTGT...CTGGCAGTGGTTCAAGCCCACATTTGACACTGCTGCTCTAGAGGAAAGATAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp AATACTTTAAAATGCAAAGCCAATTGCCACCTCCAATTGCTGAACCTCAAAAAGCCAGGACCACACCGTTaGCAGGTGACACACCGTCCC +
Preference number: 4 (lower is better)
Translates to: NTLKCKANCHLQLLNLKKPGPHR*QVTHRP
Trigger: GGGACGGTGTGTCACCTGCCAACGGTGTGGTCCTGG...CTTTTTGAGGTTCAGCAATTGGAGGTGGCAATTGGCTTTGCATTTTAAAGTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp GAAGTGCACATTCTGCCTAATGTACTTAATAAACCACTTAATAGTTGTGGGACAGGGCTGTGGACCCAGTaGGAGTGGCTCTCTGAGGTG +
Preference number: 4 (lower is better)
Translates to: EVHILPNVLNKPLNSCGTGLWTQ*EWLSEV
Trigger: CACCTCAGAGAGCCACTCCCACTGGGTCCACAGCCC...TGTCCCACAACTATTAAGTGGTTTATTAAGTACATTAGGCAGAATGTGCACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp CATTATCTTTCCTCTAGAGCAGCAGTGTCAAATGTGGGCTTGAACCACTGCCAGGCCAGGCTGCTTGCTTaGTACAGGCTTGTATTTCAA +
Preference number: 4 (lower is better)
Translates to: HYLSSRAAVSNVGLNHCQARLLA*YRLVFQ
Trigger: TTGAAATACAAGCCTGTACCAAGCAAGCAGCCTGGC...CTGGCAGTGGTTCAAGCCCACATTTGACACTGCTGCTCTAGAGGAAAGATAATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR TCA 90 bp GTCCCTAAAGTGCTAGGTAGATGTGCCAACACAATTTTGAGAGGCTTACCTGACGTGCAGTTGACCTTCTaGACACGATTGATGACAGCA +
Preference number: 4 (lower is better)
Translates to: VPKVLGRCANTILRGLPDVQLTF*TRLMTA
Trigger: TGCTGTCATCAATCGTGTTCAGAAGGTCAACTGCAC...GTCAGGTAAGCCTCTCAAAATTGTGTTGGCACATCTACCTAGCACTTTAGGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR TCA 90 bp GACAGGGCTGTATGTTGTAGAGGGGTATGCTGTAGTGCTGAATCCTTTCCTAACGTGCCAACACAATTTTaGGAGGCTTACCTGACCAAA +
Preference number: 4 (lower is better)
Translates to: DRAVCCRGVCCSAESFPNVPTQF*EAYLTK
Trigger: TTTGGTCAGGTAAGCCTCTCAAAATTGTGTTGGCAC...GTTAGGAAAGGATTCAGCACTACAGCATACCCCTCTACAACATACAGCCCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR TCA 90 bp GTCCCTAAAGTGCTAGGTAGATGTGCCAACACAATTTTGAGAGGCTTACCTGACCAGCAGTCTGAGACATaGACTTGGGAATTATGGCAC +
Preference number: 4 (lower is better)
Translates to: VPKVLGRCANTILRGLPDQQSET*TWELWH
Trigger: GTGCCATAATTCCCAAGTTCATGTCTCAGACTGCTG...GTCAGGTAAGCCTCTCAAAATTGTGTTGGCACATCTACCTAGCACTTTAGGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR TCA 90 bp AGCAGCAGTGTCAAATGTGGGCTTGAACCACTGCCAGCCACATGGCAACCTTTGAAGCTGGGATTGAATTaGCATTTCAATAGAAAGAGG +
Preference number: 4 (lower is better)
Translates to: SSSVKCGLEPLPATWQPLKLGLN*HFNRKR
Trigger: CCTCTTTCTATTGAAATGTCAATTCAATCCCAGCTT...CAAAGGTTGCCATGTGGCTGGCAGTGGTTCAAGCCCACATTTGACACTGCTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR GCA 90 bp AATAGAAAGAGGCATACTCAGATGTCCCTACATGGATTGAGGGCTGTCTTTGAGCACATTTCAGGCCCCTaGTGCTGTTGTGGTATAGGA +
Preference number: 4 (lower is better)
Translates to: NRKRHTQMSLHGLRAVFEHISGP*CCCGIG
Trigger: TCCTATACCACAACAGCAGCAGGGGCCTGAAATGTG...CTCAAAGACAGCCCTCAATCCATGTAGGGACATCTGAGTATGCCTCTTTCTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR GCA 90 bp AGACTACAAAAGGGAAGCAAGAAATGCTCCAGATCAGTCCTTGTGAAATGGAGAGGAAAGTGTTTGCCCTaGCTCATGCTGCAATGCAGC +
Preference number: 4 (lower is better)
Translates to: RLQKGSKKCSRSVLVKWRGKCLP*LMLQCS
Trigger: GCTGCATTGCAGCATGAGGCAGGGCAAACACTTTCC...TCTCCATTTCACAAGGACTGATCTGGAGCATTTCTTGCTTCCCTTTTGTAGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR GCA 90 bp ATTATTTTCCCAGGCTCCCTCCTGTCAAAATCCAAGTCAAGGTATATGGAGAGACTGTCTTTGAGGGACTaGTGTGGGGTAGTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: IIFPGSLLSKSKSRYMERLSLRD*CGVVWG
Trigger: TCCCCAAACTACCCCACAGCAGTCCCTCAAAGACAG...TCTCTCCATATACCTTGACTTGGATTTTGACAGGAGGGAGCCTGGGAAAATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp TATTATTACTGTGTTACCATCATTATCTTTCCTCTAGAGCAGCAGTGTCAAATGGGGCTGTGGACCCAGTaGGAGTGGCTCTCTGAGGTG +
Preference number: 4 (lower is better)
Translates to: YYYCVTIIIFPLEQQCQMGLWTQ*EWLSEV
Trigger: CACCTCAGAGAGCCACTCCCACTGGGTCCACAGCCC...CATTTGACACTGCTGCTCTAGAGGAAAGATAATGATGGTAACACAGTAATAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp CATTATCTTTCCTCTAGAGCAGCAGTGTCAAATGTGGGCTTGAACCACTGCCAGTATAGGAGGCAGAGCTaGAAAACTTTTGCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: HYLSSRAAVSNVGLNHCQYRRQS*KTFAGP
Trigger: TGGACCTGCAAAAGTTTTCCAGCTCTGCCTCCTATA...CTGGCAGTGGTTCAAGCCCACATTTGACACTGCTGCTCTAGAGGAAAGATAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp GTCCCTAAAGTGCTAGGTAGATGTGCCAACACAATTTTGAGAGGCTTACCTGACGAATCAATCCTCTGGTaGGATGGGATAGGATATGCC +
Preference number: 4 (lower is better)
Translates to: VPKVLGRCANTILRGLPDESILW*DGIGYA
Trigger: GGCATATCCTATCCCATCCCACCAGAGGATTGATTC...GTCAGGTAAGCCTCTCAAAATTGTGTTGGCACATCTACCTAGCACTTTAGGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp CACCTTTACCCGAAATACTTTAAAATGCAAAGCCAATTGCCACCTCCAATTGCTTGCTGTGGGGTAGTTTaGGGAACTCAGGCCCCAGAA +
Preference number: 4 (lower is better)
Translates to: HLYPKYFKMQSQLPPPIACCGVV*GTQAPE
Trigger: TTCTGGGGCCTGAGTTCCCCAAACTACCCCACAGCA...AGCAATTGGAGGTGGCAATTGGCTTTGCATTTTAAAGTATTTCGGGTAAAGGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp GTCCCTAAAGTGCTAGGTAGATGTGCCAACACAATTTTGAGAGGCTTACCTGACAGTAATCTGATCAATTaGTTGCCCCAGGGGCCCTTA +
Preference number: 4 (lower is better)
Translates to: VPKVLGRCANTILRGLPDSNLIN*LPQGPL
Trigger: TAAGGGCCCCTGGGGCAACCAATTGATCAGATTACT...GTCAGGTAAGCCTCTCAAAATTGTGTTGGCACATCTACCTAGCACTTTAGGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp AGACTACAAAAGGGAAGCAAGAAATGCTCCAGATCAGTCCTTGTGAAATGGAGATTGCTAATACCTGTGTaGGGCCAGGCTGCTTGCTTG +
Preference number: 4 (lower is better)
Translates to: RLQKGSKKCSRSVLVKWRLLIPV*GQAACL
Trigger: CAAGCAAGCAGCCTGGCCCCACACAGGTATTAGCAA...TCTCCATTTCACAAGGACTGATCTGGAGCATTTCTTGCTTCCCTTTTGTAGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR TCA 90 bp TATTATTACTGTGTTACCATCATTATCTTTCCTCTAGAGCAGCAGTGTCAAATGCACACCGTTGGCAGGTaGCACACCGTCCCCATTGGT +
Preference number: 4 (lower is better)
Translates to: YYYCVTIIIFPLEQQCQMHTVGR*HTVPIG
Trigger: ACCAATGGGGACGGTGTGTCACCTGCCAACGGTGTG...CATTTGACACTGCTGCTCTAGAGGAAAGATAATGATGGTAACACAGTAATAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR TCA 90 bp AATAGAAAGAGGCATACTCAGATGTCCCTACATGGATTGAGGGCTGTCTTTGAGGCTGGCAATGTCTGTTaGAGAACTGCTTGCAGTAGA +
Preference number: 4 (lower is better)
Translates to: NRKRHTQMSLHGLRAVFEAGNVC*RTACSR
Trigger: TCTACTGCAAGCAGTTCTTCAACAGACATTGCCAGC...CTCAAAGACAGCCCTCAATCCATGTAGGGACATCTGAGTATGCCTCTTTCTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR TCA 90 bp AGACTACAAAAGGGAAGCAAGAAATGCTCCAGATCAGTCCTTGTGAAATGGAGAGGACAGGAGGGATTATaGTCTCAATGTGACAGGGCT +
Preference number: 4 (lower is better)
Translates to: RLQKGSKKCSRSVLVKWRGQEGL*SQCDRA
Trigger: AGCCCTGTCACATTGAGATCATAATCCCTCCTGTCC...TCTCCATTTCACAAGGACTGATCTGGAGCATTTCTTGCTTCCCTTTTGTAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR GCA 90 bp TATTATTACTGTGTTACCATCATTATCTTTCCTCTAGAGCAGCAGTGTCAAATGCAGCACTGGTCTCCTTaGTGGGTGGCACGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: YYYCVTIIIFPLEQQCQMQHWSP*WVARGR
Trigger: TCTTCCCCGTGCCACCCAGCAAGGAGACCAGTGCTG...CATTTGACACTGCTGCTCTAGAGGAAAGATAATGATGGTAACACAGTAATAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR GCA 90 bp GTCCCTAAAGTGCTAGGTAGATGTGCCAACACAATTTTGAGAGGCTTACCTGACGGATGGGATAGGATATaGCCCATCTGTAGGGTATTA +
Preference number: 4 (lower is better)
Translates to: VPKVLGRCANTILRGLPDGWDRI*PICRVL
Trigger: TAATACCCTACAGATGGGGCATATCCTATCCCATCC...GTCAGGTAAGCCTCTCAAAATTGTGTTGGCACATCTACCTAGCACTTTAGGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR GCA 90 bp CATTATCTTTCCTCTAGAGCAGCAGTGTCAAATGTGGGCTTGAACCACTGCCAGAACCTGGTGATGAAGTaGACATTCTGCCTAATGTAC +
Preference number: 4 (lower is better)
Translates to: HYLSSRAAVSNVGLNHCQNLVMK*TFCLMY
Trigger: GTACATTAGGCAGAATGTGCACTTCATCACCAGGTT...CTGGCAGTGGTTCAAGCCCACATTTGACACTGCTGCTCTAGAGGAAAGATAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR GCA 90 bp CACCTTTACCCGAAATACTTTAAAATGCAAAGCCAATTGCCACCTCCAATTGCTTGGGGCCAGGCTGCTTaGTTGGTACAGGCTTGTATT +
Preference number: 4 (lower is better)
Translates to: HLYPKYFKMQSQLPPPIAWGQAA*LVQACI
Trigger: AATACAAGCCTGTACCAAGCAAGCAGCCTGGCCCCA...AGCAATTGGAGGTGGCAATTGGCTTTGCATTTTAAAGTATTTCGGGTAAAGGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp AATAGAAAGAGGCATACTCAGATGTCCCTACATGGATTGAGGGCTGTCTTTGAGCATAACCACAATCCTTaGATAGCTCCTGTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: NRKRHTQMSLHGLRAVFEHNHNP*IAPVQD
Trigger: GTCCTGGACAGGAGCTATCCAAGGATTGTGGTTATG...CTCAAAGACAGCCCTCAATCCATGTAGGGACATCTGAGTATGCCTCTTTCTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp ATTATTTTCCCAGGCTCCCTCCTGTCAAAATCCAAGTCAAGGTATATGGAGAGATCTTTCGGTAGAACCTaGGCAAACAGTCCCCACAGA +
Preference number: 4 (lower is better)
Translates to: IIFPGSLLSKSKSRYMERSFGRT*ANSPHR
Trigger: TCTGTGGGGACTGTTTGCCCAGGTTCTACCGAAAGA...TCTCTCCATATACCTTGACTTGGATTTTGACAGGAGGGAGCCTGGGAAAATAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp GAAGTGCACATTCTGCCTAATGTACTTAATAAACCACTTAATAGTTGTGGGACACCTGAGGGGGCACTGTaGGTGTATCTGCCTCCACTA +
Preference number: 4 (lower is better)
Translates to: EVHILPNVLNKPLNSCGTPEGAL*VYLPPL
Trigger: TAGTGGAGGCAGATACACCCACAGTGCCCCCTCAGG...TGTCCCACAACTATTAAGTGGTTTATTAAGTACATTAGGCAGAATGTGCACTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp ATTATTTTCCCAGGCTCCCTCCTGTCAAAATCCAAGTCAAGGTATATGGAGAGAATGTTCTCACTCACTTaGGACTCAGCACTGGTCTCC +
Preference number: 4 (lower is better)
Translates to: IIFPGSLLSKSKSRYMERMFSLT*DSALVS
Trigger: GGAGACCAGTGCTGAGTCCCAAGTGAGTGAGAACAT...TCTCTCCATATACCTTGACTTGGATTTTGACAGGAGGGAGCCTGGGAAAATAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp GTCCCTAAAGTGCTAGGTAGATGTGCCAACACAATTTTGAGAGGCTTACCTGACCAGTACTCATTTTCTTaGCAATCCATGGTGGGAAGG +
Preference number: 4 (lower is better)
Translates to: VPKVLGRCANTILRGLPDQYSFS*QSMVGR
Trigger: CCTTCCCACCATGGATTGCCAAGAAAATGAGTACTG...GTCAGGTAAGCCTCTCAAAATTGTGTTGGCACATCTACCTAGCACTTTAGGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp ATTATTTTCCCAGGCTCCCTCCTGTCAAAATCCAAGTCAAGGTATATGGAGAGAAATCCTCTGGTGGGATaGGATAGGATATGCCCCATC +
Preference number: 4 (lower is better)
Translates to: IIFPGSLLSKSKSRYMERNPLVG*DRICPI
Trigger: GATGGGGCATATCCTATCCCATCCCACCAGAGGATT...TCTCTCCATATACCTTGACTTGGATTTTGACAGGAGGGAGCCTGGGAAAATAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp GTCCCTAAAGTGCTAGGTAGATGTGCCAACACAATTTTGAGAGGCTTACCTGACGGAGAATCAATCCTCTaGTGGGATGGGATAGGATAT +
Preference number: 4 (lower is better)
Translates to: VPKVLGRCANTILRGLPDGESIL*WDGIGY
Trigger: ATATCCTATCCCATCCCACCAGAGGATTGATTCTCC...GTCAGGTAAGCCTCTCAAAATTGTGTTGGCACATCTACCTAGCACTTTAGGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp AGCAGCAGTGTCAAATGTGGGCTTGAACCACTGCCAGCCACATGGCAACCTTTGATCAGTGTTTGTAGATaGATGAACCCAAAAGATGTA +
Preference number: 4 (lower is better)
Translates to: SSSVKCGLEPLPATWQPLISVCR*MNPKDV
Trigger: TACATCTTTTGGGTTCATCCATCTACAAACACTGAT...CAAAGGTTGCCATGTGGCTGGCAGTGGTTCAAGCCCACATTTGACACTGCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR TCA 90 bp AATACTTTAAAATGCAAAGCCAATTGCCACCTCCAATTGCTGAACCTCAAAAAGAACTGGAAGGCACATTaGACCTCAGAGGTGGGGGTC +
Preference number: 4 (lower is better)
Translates to: NTLKCKANCHLQLLNLKKNWKAH*TSEVGV
Trigger: GACCCCCACCTCTGAGGTTCAATGTGCCTTCCAGTT...CTTTTTGAGGTTCAGCAATTGGAGGTGGCAATTGGCTTTGCATTTTAAAGTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR TCA 90 bp AATAGAAAGAGGCATACTCAGATGTCCCTACATGGATTGAGGGCTGTCTTTGAGTGCAATGCAGCAGTCTaGGACATGAACTTGGGAATT +
Preference number: 4 (lower is better)
Translates to: NRKRHTQMSLHGLRAVFECNAAV*DMNLGI
Trigger: AATTCCCAAGTTCATGTCTCAGACTGCTGCATTGCA...CTCAAAGACAGCCCTCAATCCATGTAGGGACATCTGAGTATGCCTCTTTCTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR TCA 90 bp AATACTTTAAAATGCAAAGCCAATTGCCACCTCCAATTGCTGAACCTCAAAAAGACACCTGCAGCCTGCTaGAGCCAAATCATCCCCTGT +
Preference number: 4 (lower is better)
Translates to: NTLKCKANCHLQLLNLKKTPAAC*SQIIPC
Trigger: ACAGGGGATGATTTGGCTTCAGCAGGCTGCAGGTGT...CTTTTTGAGGTTCAGCAATTGGAGGTGGCAATTGGCTTTGCATTTTAAAGTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR TCA 90 bp AATAGAAAGAGGCATACTCAGATGTCCCTACATGGATTGAGGGCTGTCTTTGAGATAGCATTCATGCCATaGGCAAGCACACTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: NRKRHTQMSLHGLRAVFEIAFMP*ASTLKK
Trigger: CTTCTTCAGTGTGCTTGCTCATGGCATGAATGCTAT...CTCAAAGACAGCCCTCAATCCATGTAGGGACATCTGAGTATGCCTCTTTCTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR TCA 90 bp AATAGAAAGAGGCATACTCAGATGTCCCTACATGGATTGAGGGCTGTCTTTGAGGCCACCTCCAATTGCTaGACCTCAAAAAGTTGGAAT +
Preference number: 4 (lower is better)
Translates to: NRKRHTQMSLHGLRAVFEATSNC*TSKSWN
Trigger: ATTCCAACTTTTTGAGGTTCAGCAATTGGAGGTGGC...CTCAAAGACAGCCCTCAATCCATGTAGGGACATCTGAGTATGCCTCTTTCTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR TCA 90 bp CACCTTTACCCGAAATACTTTAAAATGCAAAGCCAATTGCCACCTCCAATTGCTGGACAGGAGGGATTATaGTCTCAATGTGACAGGGCT +
Preference number: 4 (lower is better)
Translates to: HLYPKYFKMQSQLPPPIAGQEGL*SQCDRA
Trigger: AGCCCTGTCACATTGAGATCATAATCCCTCCTGTCC...AGCAATTGGAGGTGGCAATTGGCTTTGCATTTTAAAGTATTTCGGGTAAAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR GCA 90 bp ATTATTTTCCCAGGCTCCCTCCTGTCAAAATCCAAGTCAAGGTATATGGAGAGAGAGCTGGAAAACTTTTaGAGGTCCAGCTCTGTGCAT +
Preference number: 4 (lower is better)
Translates to: IIFPGSLLSKSKSRYMERELENF*RSSSVH
Trigger: ATGCACAGAGCTGGACCTGCAAAAGTTTTCCAGCTC...TCTCTCCATATACCTTGACTTGGATTTTGACAGGAGGGAGCCTGGGAAAATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR GCA 90 bp AATACTTTAAAATGCAAAGCCAATTGCCACCTCCAATTGCTGAACCTCAAAAAGCCAGCCTGTCTCCAGTaGTTTCGACTGTGTTTCCCC +
Preference number: 4 (lower is better)
Translates to: NTLKCKANCHLQLLNLKKPACLQ*FRLCFP
Trigger: GGGGAAACACAGTCGAAAGCACTGGAGACAGGCTGG...CTTTTTGAGGTTCAGCAATTGGAGGTGGCAATTGGCTTTGCATTTTAAAGTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR GCA 90 bp AATAGAAAGAGGCATACTCAGATGTCCCTACATGGATTGAGGGCTGTCTTTGAGGGATGGGATAGGATATaGCCCATCTGTAGGGTATTA +
Preference number: 4 (lower is better)
Translates to: NRKRHTQMSLHGLRAVFEGWDRI*PICRVL
Trigger: TAATACCCTACAGATGGGGCATATCCTATCCCATCC...CTCAAAGACAGCCCTCAATCCATGTAGGGACATCTGAGTATGCCTCTTTCTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR GCA 90 bp GTCCCTAAAGTGCTAGGTAGATGTGCCAACACAATTTTGAGAGGCTTACCTGACTGTTGTAGAGGGGTATaGTGTAGTGCTGAATCCTTT +
Preference number: 4 (lower is better)
Translates to: VPKVLGRCANTILRGLPDCCRGV*CSAESF
Trigger: AAAGGATTCAGCACTACAGCATACCCCTCTACAACA...GTCAGGTAAGCCTCTCAAAATTGTGTTGGCACATCTACCTAGCACTTTAGGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp ATTATTTTCCCAGGCTCCCTCCTGTCAAAATCCAAGTCAAGGTATATGGAGAGAACACACCGTCCCCATTaGTCCCAGTACTCATTTTCT +
Preference number: 4 (lower is better)
Translates to: IIFPGSLLSKSKSRYMERTHRPH*SQYSFS
Trigger: AGAAAATGAGTACTGGGACCAATGGGGACGGTGTGT...TCTCTCCATATACCTTGACTTGGATTTTGACAGGAGGGAGCCTGGGAAAATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp CACCTTTACCCGAAATACTTTAAAATGCAAAGCCAATTGCCACCTCCAATTGCTTCTTTCGGTAGAACCTaGGCAAACAGTCCCCACAGA +
Preference number: 4 (lower is better)
Translates to: HLYPKYFKMQSQLPPPIASFGRT*ANSPHR
Trigger: TCTGTGGGGACTGTTTGCCCAGGTTCTACCGAAAGA...AGCAATTGGAGGTGGCAATTGGCTTTGCATTTTAAAGTATTTCGGGTAAAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp AATACTTTAAAATGCAAAGCCAATTGCCACCTCCAATTGCTGAACCTCAAAAAGATTGAACCTCAGAGGTaGGGGTCTGCTTCGTGCACG +
Preference number: 4 (lower is better)
Translates to: NTLKCKANCHLQLLNLKKIEPQR*GSASCT
Trigger: CGTGCACGAAGCAGACCCCCACCTCTGAGGTTCAAT...CTTTTTGAGGTTCAGCAATTGGAGGTGGCAATTGGCTTTGCATTTTAAAGTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp CACCTTTACCCGAAATACTTTAAAATGCAAAGCCAATTGCCACCTCCAATTGCTATGTTCTCACTCACTTaGGACTCAGCACTGGTCTCC +
Preference number: 4 (lower is better)
Translates to: HLYPKYFKMQSQLPPPIAMFSLT*DSALVS
Trigger: GGAGACCAGTGCTGAGTCCCAAGTGAGTGAGAACAT...AGCAATTGGAGGTGGCAATTGGCTTTGCATTTTAAAGTATTTCGGGTAAAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp GTCCCTAAAGTGCTAGGTAGATGTGCCAACACAATTTTGAGAGGCTTACCTGACATTAGAGTTAAGGGCTaGGAACTTCAAAGGGCACAT +
Preference number: 4 (lower is better)
Translates to: VPKVLGRCANTILRGLPDIRVKG*ELQRAH
Trigger: ATGTGCCCTTTGAAGTTCCCAGCCCTTAACTCTAAT...GTCAGGTAAGCCTCTCAAAATTGTGTTGGCACATCTACCTAGCACTTTAGGGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp ATTATTTTCCCAGGCTCCCTCCTGTCAAAATCCAAGTCAAGGTATATGGAGAGAGAATCAATCCTCTGGTaGGATGGGATAGGATATGCC +
Preference number: 4 (lower is better)
Translates to: IIFPGSLLSKSKSRYMERESILW*DGIGYA
Trigger: GGCATATCCTATCCCATCCCACCAGAGGATTGATTC...TCTCTCCATATACCTTGACTTGGATTTTGACAGGAGGGAGCCTGGGAAAATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp GACAGGGCTGTATGTTGTAGAGGGGTATGCTGTAGTGCTGAATCCTTTCCTAACCATGAGATGTATAGGTaGGAGCTAAAGGCAAAAAGA +
Preference number: 4 (lower is better)
Translates to: DRAVCCRGVCCSAESFPNHEMYR*ELKAKR
Trigger: TCTTTTTGCCTTTAGCTCCCACCTATACATCTCATG...GTTAGGAAAGGATTCAGCACTACAGCATACCCCTCTACAACATACAGCCCTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp ATTATTTTCCCAGGCTCCCTCCTGTCAAAATCCAAGTCAAGGTATATGGAGAGAGCCAGGCTGCTTGCTTaGTACAGGCTTGTATTTCAA +
Preference number: 4 (lower is better)
Translates to: IIFPGSLLSKSKSRYMERARLLA*YRLVFQ
Trigger: TTGAAATACAAGCCTGTACCAAGCAAGCAGCCTGGC...TCTCTCCATATACCTTGACTTGGATTTTGACAGGAGGGAGCCTGGGAAAATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp AATACTTTAAAATGCAAAGCCAATTGCCACCTCCAATTGCTGAACCTCAAAAAGCCACTGCCAGCCACATaGCAACCTTTGAACACCTGC +
Preference number: 4 (lower is better)
Translates to: NTLKCKANCHLQLLNLKKPLPAT*QPLNTC
Trigger: GCAGGTGTTCAAAGGTTGCCATGTGGCTGGCAGTGG...CTTTTTGAGGTTCAGCAATTGGAGGTGGCAATTGGCTTTGCATTTTAAAGTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp AGACTACAAAAGGGAAGCAAGAAATGCTCCAGATCAGTCCTTGTGAAATGGAGAGTTGGTAGAGAGGAGTaGGACAGGAGGGATTATGAT +
Preference number: 4 (lower is better)
Translates to: RLQKGSKKCSRSVLVKWRVGREE*DRRDYD
Trigger: ATCATAATCCCTCCTGTCCCACTCCTCTCTACCAAC...TCTCCATTTCACAAGGACTGATCTGGAGCATTTCTTGCTTCCCTTTTGTAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
3UTR CAA 72 bp TATTTGCTAATACCTGTGTGGGGCCAGGCTGCTTGCTaGGTACAGGCTTGTATTTCAATTGCTTCTAATCCT +
Preference number: 4 (lower is better)
Translates to: YLLIPVWGQAAC*VQACISIASNP
Trigger: AGGATTAGAAGCAATTGAAATACAAGCCTGTACCAAGCAAGCAGCCTGGCCCCACACAGGTATTAGCAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR TCA 90 bp ATTATTTTCCCAGGCTCCCTCCTGTCAAAATCCAAGTCAAGGTATATGGAGAGAGTGCCAACACAATTTTaGGAGGCTTACCTGACCAAA +
Preference number: 4 (lower is better)
Translates to: IIFPGSLLSKSKSRYMERVPTQF*EAYLTK
Trigger: TTTGGTCAGGTAAGCCTCTCAAAATTGTGTTGGCAC...TCTCTCCATATACCTTGACTTGGATTTTGACAGGAGGGAGCCTGGGAAAATAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR TCA 90 bp AGACTACAAAAGGGAAGCAAGAAATGCTCCAGATCAGTCCTTGTGAAATGGAGAGCCACCTCCAATTGCTaGACCTCAAAAAGTTGGAAT +
Preference number: 4 (lower is better)
Translates to: RLQKGSKKCSRSVLVKWRATSNC*TSKSWN
Trigger: ATTCCAACTTTTTGAGGTTCAGCAATTGGAGGTGGC...TCTCCATTTCACAAGGACTGATCTGGAGCATTTCTTGCTTCCCTTTTGTAGTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR GCA 90 bp AATACTTTAAAATGCAAAGCCAATTGCCACCTCCAATTGCTGAACCTCAAAAAGACACCACTAGCAGGCTaGTCACCAGTGCAACAAGTG +
Preference number: 4 (lower is better)
Translates to: NTLKCKANCHLQLLNLKKTPLAG*SPVQQV
Trigger: CACTTGTTGCACTGGTGAGCAGCCTGCTAGTGGTGT...CTTTTTGAGGTTCAGCAATTGGAGGTGGCAATTGGCTTTGCATTTTAAAGTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR GCA 90 bp GAAGTGCACATTCTGCCTAATGTACTTAATAAACCACTTAATAGTTGTGGGACACTGTCTTTGAGGGACTaGTGTGGGGTAGTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: EVHILPNVLNKPLNSCGTLSLRD*CGVVWG
Trigger: TCCCCAAACTACCCCACAGCAGTCCCTCAAAGACAG...TGTCCCACAACTATTAAGTGGTTTATTAAGTACATTAGGCAGAATGTGCACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR GCA 90 bp CACCTTTACCCGAAATACTTTAAAATGCAAAGCCAATTGCCACCTCCAATTGCTCAACCTTTGAACACCTaGAGCCTGCTGAAGCCAAAT +
Preference number: 4 (lower is better)
Translates to: HLYPKYFKMQSQLPPPIAQPLNT*SLLKPN
Trigger: ATTTGGCTTCAGCAGGCTGCAGGTGTTCAAAGGTTG...AGCAATTGGAGGTGGCAATTGGCTTTGCATTTTAAAGTATTTCGGGTAAAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR GCA 90 bp TATTATTACTGTGTTACCATCATTATCTTTCCTCTAGAGCAGCAGTGTCAAATGGTGGGCTTGAACCACTaGCAGCCACATGGCAACCTT +
Preference number: 4 (lower is better)
Translates to: YYYCVTIIIFPLEQQCQMVGLNH*QPHGNL
Trigger: AAGGTTGCCATGTGGCTGGCAGTGGTTCAAGCCCAC...CATTTGACACTGCTGCTCTAGAGGAAAGATAATGATGGTAACACAGTAATAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp ATTATTTTCCCAGGCTCCCTCCTGTCAAAATCCAAGTCAAGGTATATGGAGAGATATAGGAGGCAGAGCTaGAAAACTTTTGCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: IIFPGSLLSKSKSRYMERYRRQS*KTFAGP
Trigger: TGGACCTGCAAAAGTTTTCCAGCTCTGCCTCCTATA...TCTCTCCATATACCTTGACTTGGATTTTGACAGGAGGGAGCCTGGGAAAATAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp GAAGTGCACATTCTGCCTAATGTACTTAATAAACCACTTAATAGTTGTGGGACACCCCTGCTGCTGTTGTaGTATAGGAACAGAGTCCAG +
Preference number: 4 (lower is better)
Translates to: EVHILPNVLNKPLNSCGTPLLLL*YRNRVQ
Trigger: CTGGACTCTGTTCCTATACCACAACAGCAGCAGGGG...TGTCCCACAACTATTAAGTGGTTTATTAAGTACATTAGGCAGAATGTGCACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp ATTATTTTCCCAGGCTCCCTCCTGTCAAAATCCAAGTCAAGGTATATGGAGAGAGGAGAATCAATCCTCTaGTGGGATGGGATAGGATAT +
Preference number: 4 (lower is better)
Translates to: IIFPGSLLSKSKSRYMERGESIL*WDGIGY
Trigger: ATATCCTATCCCATCCCACCAGAGGATTGATTCTCC...TCTCTCCATATACCTTGACTTGGATTTTGACAGGAGGGAGCCTGGGAAAATAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp AGACTACAAAAGGGAAGCAAGAAATGCTCCAGATCAGTCCTTGTGAAATGGAGACATGAATGTGGAATCTaGCTCCCCAGACTACAAAAG +
Preference number: 4 (lower is better)
Translates to: RLQKGSKKCSRSVLVKWRHECGI*LPRLQK
Trigger: CTTTTGTAGTCTGGGGAGCCAGATTCCACATTCATG...TCTCCATTTCACAAGGACTGATCTGGAGCATTTCTTGCTTCCCTTTTGTAGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp CACCTTTACCCGAAATACTTTAAAATGCAAAGCCAATTGCCACCTCCAATTGCTAGTAATCTGATCAATTaGTTGCCCCAGGGGCCCTTA +
Preference number: 4 (lower is better)
Translates to: HLYPKYFKMQSQLPPPIASNLIN*LPQGPL
Trigger: TAAGGGCCCCTGGGGCAACCAATTGATCAGATTACT...AGCAATTGGAGGTGGCAATTGGCTTTGCATTTTAAAGTATTTCGGGTAAAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp TATTATTACTGTGTTACCATCATTATCTTTCCTCTAGAGCAGCAGTGTCAAATGCCACTGCCAGCCACATaGCAACCTTTGAACACCTGC +
Preference number: 4 (lower is better)
Translates to: YYYCVTIIIFPLEQQCQMPLPAT*QPLNTC
Trigger: GCAGGTGTTCAAAGGTTGCCATGTGGCTGGCAGTGG...CATTTGACACTGCTGCTCTAGAGGAAAGATAATGATGGTAACACAGTAATAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp CACCTTTACCCGAAATACTTTAAAATGCAAAGCCAATTGCCACCTCCAATTGCTATTCTGGGTATGGCTTaGGCTGTCCACATAGCATTC +
Preference number: 4 (lower is better)
Translates to: HLYPKYFKMQSQLPPPIAILGMA*AVHIAF
Trigger: GAATGCTATGTGGACAGCCCAAGCCATACCCAGAAT...AGCAATTGGAGGTGGCAATTGGCTTTGCATTTTAAAGTATTTCGGGTAAAGGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR TCA 90 bp CACCTTTACCCGAAATACTTTAAAATGCAAAGCCAATTGCCACCTCCAATTGCTGTGCCAACACAATTTTaGGAGGCTTACCTGACCAAA +
Preference number: 4 (lower is better)
Translates to: HLYPKYFKMQSQLPPPIAVPTQF*EAYLTK
Trigger: TTTGGTCAGGTAAGCCTCTCAAAATTGTGTTGGCAC...AGCAATTGGAGGTGGCAATTGGCTTTGCATTTTAAAGTATTTCGGGTAAAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR TCA 90 bp ATTATTTTCCCAGGCTCCCTCCTGTCAAAATCCAAGTCAAGGTATATGGAGAGACATGAGCAAGCACACTaGAGAAGTCTTACTCTTTCA +
Preference number: 4 (lower is better)
Translates to: IIFPGSLLSKSKSRYMERHEQAH*RSLTLS
Trigger: TGAAAGAGTAAGACTTCTTCAGTGTGCTTGCTCATG...TCTCTCCATATACCTTGACTTGGATTTTGACAGGAGGGAGCCTGGGAAAATAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR TCA 90 bp AGACTACAAAAGGGAAGCAAGAAATGCTCCAGATCAGTCCTTGTGAAATGGAGACATGAGCAAGCACACTaGAGAAGTCTTACTCTTTCA +
Preference number: 4 (lower is better)
Translates to: RLQKGSKKCSRSVLVKWRHEQAH*RSLTLS
Trigger: TGAAAGAGTAAGACTTCTTCAGTGTGCTTGCTCATG...TCTCCATTTCACAAGGACTGATCTGGAGCATTTCTTGCTTCCCTTTTGTAGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR TCA 90 bp CACCTTTACCCGAAATACTTTAAAATGCAAAGCCAATTGCCACCTCCAATTGCTATAGCATTCATGCCATaGGCAAGCACACTGAAGAAG +
Preference number: 4 (lower is better)
Translates to: HLYPKYFKMQSQLPPPIAIAFMP*ASTLKK
Trigger: CTTCTTCAGTGTGCTTGCTCATGGCATGAATGCTAT...AGCAATTGGAGGTGGCAATTGGCTTTGCATTTTAAAGTATTTCGGGTAAAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR GCA 90 bp TATTATTACTGTGTTACCATCATTATCTTTCCTCTAGAGCAGCAGTGTCAAATGACACCACTAGCAGGCTaGTCACCAGTGCAACAAGTG +
Preference number: 4 (lower is better)
Translates to: YYYCVTIIIFPLEQQCQMTPLAG*SPVQQV
Trigger: CACTTGTTGCACTGGTGAGCAGCCTGCTAGTGGTGT...CATTTGACACTGCTGCTCTAGAGGAAAGATAATGATGGTAACACAGTAATAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR GCA 90 bp GTCCCTAAAGTGCTAGGTAGATGTGCCAACACAATTTTGAGAGGCTTACCTGACCGAAATACTTTAAAATaGAAAGCCAATTGCCACCTC +
Preference number: 4 (lower is better)
Translates to: VPKVLGRCANTILRGLPDRNTLK*KANCHL
Trigger: GAGGTGGCAATTGGCTTTGCATTTTAAAGTATTTCG...GTCAGGTAAGCCTCTCAAAATTGTGTTGGCACATCTACCTAGCACTTTAGGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp CACCTTTACCCGAAATACTTTAAAATGCAAAGCCAATTGCCACCTCCAATTGCTTATAGGAGGCAGAGCTaGAAAACTTTTGCAGGTCCA +
Preference number: 4 (lower is better)
Translates to: HLYPKYFKMQSQLPPPIAYRRQS*KTFAGP
Trigger: TGGACCTGCAAAAGTTTTCCAGCTCTGCCTCCTATA...AGCAATTGGAGGTGGCAATTGGCTTTGCATTTTAAAGTATTTCGGGTAAAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp GAAGTGCACATTCTGCCTAATGTACTTAATAAACCACTTAATAGTTGTGGGACAGCTCTTGCTCCCAAATaGGACTCCGGTACAAATCCA +
Preference number: 4 (lower is better)
Translates to: EVHILPNVLNKPLNSCGTALAPK*DSGTNP
Trigger: TGGATTTGTACCGGAGTCCCATTTGGGAGCAAGAGC...TGTCCCACAACTATTAAGTGGTTTATTAAGTACATTAGGCAGAATGTGCACTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374719.8
CDS-3UTR CCA 90 bp CACCTTTACCCGAAATACTTTAAAATGCAAAGCCAATTGCCACCTCCAATTGCTTGTAAGGTTCCAAAATaGCGAACTTCAGCCCTTCTC +
Preference number: 4 (lower is better)
Translates to: HLYPKYFKMQSQLPPPIACKVPK*RTSALL
Trigger: GAGAAGGGCTGAAGTTCGCCATTTTGGAACCTTACA...AGCAATTGGAGGTGGCAATTGGCTTTGCATTTTAAAGTATTTCGGGTAAAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp GACAGGGCTGTATGTTGTAGAGGGGTATGCTGTAGTGCTGAATCCTTTCCTAACAAATCATCCCCTGTCTaGATATTATTTCTTCTACCA +
Preference number: 4 (lower is better)
Translates to: DRAVCCRGVCCSAESFPNKSSPV*ILFLLP
Trigger: TGGTAGAAGAAATAATATCCAGACAGGGGATGATTT...GTTAGGAAAGGATTCAGCACTACAGCATACCCCTCTACAACATACAGCCCTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR TCA 90 bp AATACTTTAAAATGCAAAGCCAATTGCCACCTCCAATTGCTGAACCTCAAAAAGGCTGGCAATGTCTGTTaGAGAACTGCTTGCAGTAGA +
Preference number: 4 (lower is better)
Translates to: NTLKCKANCHLQLLNLKKAGNVC*RTACSR
Trigger: TCTACTGCAAGCAGTTCTTCAACAGACATTGCCAGC...CTTTTTGAGGTTCAGCAATTGGAGGTGGCAATTGGCTTTGCATTTTAAAGTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR GCA 90 bp AATACTTTAAAATGCAAAGCCAATTGCCACCTCCAATTGCTGAACCTCAAAAAGATTTCAGGCCCCTGCTaGTGTTGTGGTATAGGAACA +
Preference number: 4 (lower is better)
Translates to: NTLKCKANCHLQLLNLKKISGPC*CCGIGT
Trigger: TGTTCCTATACCACAACAGCAGCAGGGGCCTGAAAT...CTTTTTGAGGTTCAGCAATTGGAGGTGGCAATTGGCTTTGCATTTTAAAGTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR GCA 90 bp AATACTTTAAAATGCAAAGCCAATTGCCACCTCCAATTGCTGAACCTCAAAAAGCAACCTTTGAACACCTaGAGCCTGCTGAAGCCAAAT +
Preference number: 4 (lower is better)
Translates to: NTLKCKANCHLQLLNLKKQPLNT*SLLKPN
Trigger: ATTTGGCTTCAGCAGGCTGCAGGTGTTCAAAGGTTG...CTTTTTGAGGTTCAGCAATTGGAGGTGGCAATTGGCTTTGCATTTTAAAGTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp GAAGTGCACATTCTGCCTAATGTACTTAATAAACCACTTAATAGTTGTGGGACAACACACCGTCCCCATTaGTCCCAGTACTCATTTTCT +
Preference number: 4 (lower is better)
Translates to: EVHILPNVLNKPLNSCGTTHRPH*SQYSFS
Trigger: AGAAAATGAGTACTGGGACCAATGGGGACGGTGTGT...TGTCCCACAACTATTAAGTGGTTTATTAAGTACATTAGGCAGAATGTGCACTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp GAAGTGCACATTCTGCCTAATGTACTTAATAAACCACTTAATAGTTGTGGGACACATAACCACAATCCTTaGATAGCTCCTGTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: EVHILPNVLNKPLNSCGTHNHNP*IAPVQD
Trigger: GTCCTGGACAGGAGCTATCCAAGGATTGTGGTTATG...TGTCCCACAACTATTAAGTGGTTTATTAAGTACATTAGGCAGAATGTGCACTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp TATTATTACTGTGTTACCATCATTATCTTTCCTCTAGAGCAGCAGTGTCAAATGTCTTTCGGTAGAACCTaGGCAAACAGTCCCCACAGA +
Preference number: 4 (lower is better)
Translates to: YYYCVTIIIFPLEQQCQMSFGRT*ANSPHR
Trigger: TCTGTGGGGACTGTTTGCCCAGGTTCTACCGAAAGA...CATTTGACACTGCTGCTCTAGAGGAAAGATAATGATGGTAACACAGTAATAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp AGACTACAAAAGGGAAGCAAGAAATGCTCCAGATCAGTCCTTGTGAAATGGAGAGAGGCTAGCTGGTACTaGATCAGAGAAAATAATCAA +
Preference number: 4 (lower is better)
Translates to: RLQKGSKKCSRSVLVKWREASWY*IRENNQ
Trigger: TTGATTATTTTCTCTGATCCAGTACCAGCTAGCCTC...TCTCCATTTCACAAGGACTGATCTGGAGCATTTCTTGCTTCCCTTTTGTAGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000396050.5
CDS-3UTR CCA 90 bp CACCTTTACCCGAAATACTTTAAAATGCAAAGCCAATTGCCACCTCCAATTGCTATTAGAGTTAAGGGCTaGGAACTTCAAAGGGCACAT +
Preference number: 4 (lower is better)
Translates to: HLYPKYFKMQSQLPPPIAIRVKG*ELQRAH
Trigger: ATGTGCCCTTTGAAGTTCCCAGCCCTTAACTCTAAT...AGCAATTGGAGGTGGCAATTGGCTTTGCATTTTAAAGTATTTCGGGTAAAGGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp TATTATTACTGTGTTACCATCATTATCTTTCCTCTAGAGCAGCAGTGTCAAATGAATCCTCTGGTGGGATaGGATAGGATATGCCCCATC +
Preference number: 4 (lower is better)
Translates to: YYYCVTIIIFPLEQQCQMNPLVG*DRICPI
Trigger: GATGGGGCATATCCTATCCCATCCCACCAGAGGATT...CATTTGACACTGCTGCTCTAGAGGAAAGATAATGATGGTAACACAGTAATAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp GAAGTGCACATTCTGCCTAATGTACTTAATAAACCACTTAATAGTTGTGGGACAGAATCAATCCTCTGGTaGGATGGGATAGGATATGCC +
Preference number: 4 (lower is better)
Translates to: EVHILPNVLNKPLNSCGTESILW*DGIGYA
Trigger: GGCATATCCTATCCCATCCCACCAGAGGATTGATTC...TGTCCCACAACTATTAAGTGGTTTATTAAGTACATTAGGCAGAATGTGCACTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp ATTATTTTCCCAGGCTCCCTCCTGTCAAAATCCAAGTCAAGGTATATGGAGAGACATGAGATGTATAGGTaGGAGCTAAAGGCAAAAAGA +
Preference number: 4 (lower is better)
Translates to: IIFPGSLLSKSKSRYMERHEMYR*ELKAKR
Trigger: TCTTTTTGCCTTTAGCTCCCACCTATACATCTCATG...TCTCTCCATATACCTTGACTTGGATTTTGACAGGAGGGAGCCTGGGAAAATAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp AATACTTTAAAATGCAAAGCCAATTGCCACCTCCAATTGCTGAACCTCAAAAAGGTTGGTAGAGAGGAGTaGGACAGGAGGGATTATGAT +
Preference number: 4 (lower is better)
Translates to: NTLKCKANCHLQLLNLKKVGREE*DRRDYD
Trigger: ATCATAATCCCTCCTGTCCCACTCCTCTCTACCAAC...CTTTTTGAGGTTCAGCAATTGGAGGTGGCAATTGGCTTTGCATTTTAAAGTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR TCA 90 bp TATTATTACTGTGTTACCATCATTATCTTTCCTCTAGAGCAGCAGTGTCAAATGGCTGGCAATGTCTGTTaGAGAACTGCTTGCAGTAGA +
Preference number: 4 (lower is better)
Translates to: YYYCVTIIIFPLEQQCQMAGNVC*RTACSR
Trigger: TCTACTGCAAGCAGTTCTTCAACAGACATTGCCAGC...CATTTGACACTGCTGCTCTAGAGGAAAGATAATGATGGTAACACAGTAATAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR TCA 90 bp GAAGTGCACATTCTGCCTAATGTACTTAATAAACCACTTAATAGTTGTGGGACATTAAGTGGCTGGGTCTaGAAGATGTTCTCACTCACT +
Preference number: 4 (lower is better)
Translates to: EVHILPNVLNKPLNSCGTLSGWV*KMFSLT
Trigger: AGTGAGTGAGAACATCTTTCAGACCCAGCCACTTAA...TGTCCCACAACTATTAAGTGGTTTATTAAGTACATTAGGCAGAATGTGCACTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR TCA 90 bp AATACTTTAAAATGCAAAGCCAATTGCCACCTCCAATTGCTGAACCTCAAAAAGCCAAAAATGCAGACATaGAAACCCTACCCCATTCAC +
Preference number: 4 (lower is better)
Translates to: NTLKCKANCHLQLLNLKKPKMQT*KPYPIH
Trigger: GTGAATGGGGTAGGGTTTTCATGTCTGCATTTTTGG...CTTTTTGAGGTTCAGCAATTGGAGGTGGCAATTGGCTTTGCATTTTAAAGTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR TCA 90 bp TATTATTACTGTGTTACCATCATTATCTTTCCTCTAGAGCAGCAGTGTCAAATGCAGCAGTCTGAGACATaGACTTGGGAATTATGGCAC +
Preference number: 4 (lower is better)
Translates to: YYYCVTIIIFPLEQQCQMQQSET*TWELWH
Trigger: GTGCCATAATTCCCAAGTTCATGTCTCAGACTGCTG...CATTTGACACTGCTGCTCTAGAGGAAAGATAATGATGGTAACACAGTAATAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR TCA 90 bp ATTATTTTCCCAGGCTCCCTCCTGTCAAAATCCAAGTCAAGGTATATGGAGAGAAAGCTGGGATTGAATTaGCATTTCAATAGAAAGAGG +
Preference number: 4 (lower is better)
Translates to: IIFPGSLLSKSKSRYMERKLGLN*HFNRKR
Trigger: CCTCTTTCTATTGAAATGTCAATTCAATCCCAGCTT...TCTCTCCATATACCTTGACTTGGATTTTGACAGGAGGGAGCCTGGGAAAATAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR TCA 90 bp GAAGTGCACATTCTGCCTAATGTACTTAATAAACCACTTAATAGTTGTGGGACAGTCCTTTTAGTAATCTaGTCAATTGGTTGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: EVHILPNVLNKPLNSCGTVLLVI*SIGCPR
Trigger: CCTGGGGCAACCAATTGATCAGATTACTAAAAGGAC...TGTCCCACAACTATTAAGTGGTTTATTAAGTACATTAGGCAGAATGTGCACTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR TCA 90 bp AATACTTTAAAATGCAAAGCCAATTGCCACCTCCAATTGCTGAACCTCAAAAAGGTCCTTTTAGTAATCTaGTCAATTGGTTGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: NTLKCKANCHLQLLNLKKVLLVI*SIGCPR
Trigger: CCTGGGGCAACCAATTGATCAGATTACTAAAAGGAC...CTTTTTGAGGTTCAGCAATTGGAGGTGGCAATTGGCTTTGCATTTTAAAGTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR GCA 90 bp GAAGTGCACATTCTGCCTAATGTACTTAATAAACCACTTAATAGTTGTGGGACAGGATGGGATAGGATATaGCCCATCTGTAGGGTATTA +
Preference number: 4 (lower is better)
Translates to: EVHILPNVLNKPLNSCGTGWDRI*PICRVL
Trigger: TAATACCCTACAGATGGGGCATATCCTATCCCATCC...TGTCCCACAACTATTAAGTGGTTTATTAAGTACATTAGGCAGAATGTGCACTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp TATTATTACTGTGTTACCATCATTATCTTTCCTCTAGAGCAGCAGTGTCAAATGCATAACCACAATCCTTaGATAGCTCCTGTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: YYYCVTIIIFPLEQQCQMHNHNP*IAPVQD
Trigger: GTCCTGGACAGGAGCTATCCAAGGATTGTGGTTATG...CATTTGACACTGCTGCTCTAGAGGAAAGATAATGATGGTAACACAGTAATAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR TCA 90 bp TATTATTACTGTGTTACCATCATTATCTTTCCTCTAGAGCAGCAGTGTCAAATGTTAAGTGGCTGGGTCTaGAAGATGTTCTCACTCACT +
Preference number: 4 (lower is better)
Translates to: YYYCVTIIIFPLEQQCQMLSGWV*KMFSLT
Trigger: AGTGAGTGAGAACATCTTTCAGACCCAGCCACTTAA...CATTTGACACTGCTGCTCTAGAGGAAAGATAATGATGGTAACACAGTAATAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR TCA 90 bp TATTATTACTGTGTTACCATCATTATCTTTCCTCTAGAGCAGCAGTGTCAAATGGTCCTTTTAGTAATCTaGTCAATTGGTTGCCCCAGG +
Preference number: 4 (lower is better)
Translates to: YYYCVTIIIFPLEQQCQMVLLVI*SIGCPR
Trigger: CCTGGGGCAACCAATTGATCAGATTACTAAAAGGAC...CATTTGACACTGCTGCTCTAGAGGAAAGATAATGATGGTAACACAGTAATAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR TCA 90 bp TATTATTACTGTGTTACCATCATTATCTTTCCTCTAGAGCAGCAGTGTCAAATGAAGTTGGAATTAAGGTaGTTCTGGGTATGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: YYYCVTIIIFPLEQQCQMKLELR*FWVWLG
Trigger: CCCAAGCCATACCCAGAATCACCTTAATTCCAACTT...CATTTGACACTGCTGCTCTAGAGGAAAGATAATGATGGTAACACAGTAATAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR GCA 90 bp CACCTTTACCCGAAATACTTTAAAATGCAAAGCCAATTGCCACCTCCAATTGCTCGAAATACTTTAAAATaGAAAGCCAATTGCCACCTC +
Preference number: 4 (lower is better)
Translates to: HLYPKYFKMQSQLPPPIARNTLK*KANCHL
Trigger: GAGGTGGCAATTGGCTTTGCATTTTAAAGTATTTCG...AGCAATTGGAGGTGGCAATTGGCTTTGCATTTTAAAGTATTTCGGGTAAAGGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR GCA 90 bp AATACTTTAAAATGCAAAGCCAATTGCCACCTCCAATTGCTGAACCTCAAAAAGTGTTGTAGAGGGGTATaGTGTAGTGCTGAATCCTTT +
Preference number: 4 (lower is better)
Translates to: NTLKCKANCHLQLLNLKKCCRGV*CSAESF
Trigger: AAAGGATTCAGCACTACAGCATACCCCTCTACAACA...CTTTTTGAGGTTCAGCAATTGGAGGTGGCAATTGGCTTTGCATTTTAAAGTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp AGACTACAAAAGGGAAGCAAGAAATGCTCCAGATCAGTCCTTGTGAAATGGAGAATCAGTGTTTGTAGATaGATGAACCCAAAAGATGTA +
Preference number: 4 (lower is better)
Translates to: RLQKGSKKCSRSVLVKWRISVCR*MNPKDV
Trigger: TACATCTTTTGGGTTCATCCATCTACAAACACTGAT...TCTCCATTTCACAAGGACTGATCTGGAGCATTTCTTGCTTCCCTTTTGTAGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp AGACTACAAAAGGGAAGCAAGAAATGCTCCAGATCAGTCCTTGTGAAATGGAGAAAATCATCCCCTGTCTaGATATTATTTCTTCTACCA +
Preference number: 4 (lower is better)
Translates to: RLQKGSKKCSRSVLVKWRKSSPV*ILFLLP
Trigger: TGGTAGAAGAAATAATATCCAGACAGGGGATGATTT...TCTCCATTTCACAAGGACTGATCTGGAGCATTTCTTGCTTCCCTTTTGTAGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR GCA 90 bp TATTATTACTGTGTTACCATCATTATCTTTCCTCTAGAGCAGCAGTGTCAAATGAACCTGGTGATGAAGTaGACATTCTGCCTAATGTAC +
Preference number: 4 (lower is better)
Translates to: YYYCVTIIIFPLEQQCQMNLVMK*TFCLMY
Trigger: GTACATTAGGCAGAATGTGCACTTCATCACCAGGTT...CATTTGACACTGCTGCTCTAGAGGAAAGATAATGATGGTAACACAGTAATAATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp AATACTTTAAAATGCAAAGCCAATTGCCACCTCCAATTGCTGAACCTCAAAAAGCATGAGATGTATAGGTaGGAGCTAAAGGCAAAAAGA +
Preference number: 4 (lower is better)
Translates to: NTLKCKANCHLQLLNLKKHEMYR*ELKAKR
Trigger: TCTTTTTGCCTTTAGCTCCCACCTATACATCTCATG...CTTTTTGAGGTTCAGCAATTGGAGGTGGCAATTGGCTTTGCATTTTAAAGTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CCA 90 bp CACCTTTACCCGAAATACTTTAAAATGCAAAGCCAATTGCCACCTCCAATTGCTATCAGTGTTTGTAGATaGATGAACCCAAAAGATGTA +
Preference number: 4 (lower is better)
Translates to: HLYPKYFKMQSQLPPPIAISVCR*MNPKDV
Trigger: TACATCTTTTGGGTTCATCCATCTACAAACACTGAT...AGCAATTGGAGGTGGCAATTGGCTTTGCATTTTAAAGTATTTCGGGTAAAGGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR GCA 90 bp GAAGTGCACATTCTGCCTAATGTACTTAATAAACCACTTAATAGTTGTGGGACAACAATGGGACCTTTTTaGTTTTTCCCAAGTCCTTTT +
Preference number: 4 (lower is better)
Translates to: EVHILPNVLNKPLNSCGTTMGPF*FFPSPF
Trigger: AAAAGGACTTGGGAAAAAGCAAAAAGGTCCCATTGT...TGTCCCACAACTATTAAGTGGTTTATTAAGTACATTAGGCAGAATGTGCACTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR GCA 90 bp AATACTTTAAAATGCAAAGCCAATTGCCACCTCCAATTGCTGAACCTCAAAAAGACAATGGGACCTTTTTaGTTTTTCCCAAGTCCTTTT +
Preference number: 4 (lower is better)
Translates to: NTLKCKANCHLQLLNLKKTMGPF*FFPSPF
Trigger: AAAAGGACTTGGGAAAAAGCAAAAAGGTCCCATTGT...CTTTTTGAGGTTCAGCAATTGGAGGTGGCAATTGGCTTTGCATTTTAAAGTATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR GCA 90 bp AATACTTTAAAATGCAAAGCCAATTGCCACCTCCAATTGCTGAACCTCAAAAAGCGAAATACTTTAAAATaGAAAGCCAATTGCCACCTC +
Preference number: 4 (lower is better)
Translates to: NTLKCKANCHLQLLNLKKRNTLK*KANCHL
Trigger: GAGGTGGCAATTGGCTTTGCATTTTAAAGTATTTCG...CTTTTTGAGGTTCAGCAATTGGAGGTGGCAATTGGCTTTGCATTTTAAAGTATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR GCA 90 bp TATTATTACTGTGTTACCATCATTATCTTTCCTCTAGAGCAGCAGTGTCAAATGACAATGGGACCTTTTTaGTTTTTCCCAAGTCCTTTT +
Preference number: 4 (lower is better)
Translates to: YYYCVTIIIFPLEQQCQMTMGPF*FFPSPF
Trigger: AAAAGGACTTGGGAAAAAGCAAAAAGGTCCCATTGT...CATTTGACACTGCTGCTCTAGAGGAAAGATAATGATGGTAACACAGTAATAATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS CCA 90 bp AGGTCCAGCTCTGTGCATTCGATGGGGCTGTGGACCCAGTGGGAGTaGCTCTCTGAGGTGCAGGAGGCCATGGTAAAGGACTCCTGTGTG +
Preference number: 5 (lower is better)
Translates to: RSSSVHSMGLWTQWE*LSEVQEAMVKDSCV
Trigger: CACACAGGAGTCCTTTACCATGGCCTCCTGCACCTCAGAGAGCCACTCCCACTGGGTCCACAGCCCCATCGAATGCACAGAGCTGGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253392.5
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS CCA 90 bp TTTTGCAGGTCCAGCTCTGTGCATTCGATGGGGCTGTGGACCCAGTaGGAGTGGCTCTCTGAGGTGCAGGAGGCCATGGTAAAGGACTCC +
Preference number: 5 (lower is better)
Translates to: FCRSSSVHSMGLWTQ*EWLSEVQEAMVKDS
Trigger: GGAGTCCTTTACCATGGCCTCCTGCACCTCAGAGAGCCACTCCCACTGGGTCCACAGCCCCATCGAATGCACAGAGCTGGACCTGCAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253392.5
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS CCA 90 bp AGGCAGAGCTGGAAAACTTTTGCAGGTCCAGCTCTGTGCATTCGATaGGGCTGTGGACCCAGTGGGAGTGGCTCTCTGAGGTGCAGGAGG +
Preference number: 5 (lower is better)
Translates to: RQSWKTFAGPALCIR*GCGPSGSGSLRCRR
Trigger: CCTCCTGCACCTCAGAGAGCCACTCCCACTGGGTCCACAGCCCCATCGAATGCACAGAGCTGGACCTGCAAAAGTTTTCCAGCTCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253392.5
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS GCA 90 bp AGGCACATTGAACCTCAGAGGTGGGGGTCTGCTTCGTGCACGGGATaGACTCTTGGTCCTGCAGGCCTCCAATGCGTGTCTTTCGGTAGA +
Preference number: 5 (lower is better)
Translates to: RHIEPQRWGSASCTG*TLGPAGLQCVSFGR
Trigger: TCTACCGAAAGACACGCATTGGAGGCCTGCAGGACCAAGAGTGCATCCCGTGCACGAAGCAGACCCCCACCTCTGAGGTTCAATGTGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253392.5
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS GCA 90 bp TCAACTGGAAGGCACATTGAACCTCAGAGGTGGGGGTCTGCTTCGTaGACGGGATGCACTCTTGGTCCTGCAGGCCTCCAATGCGTGTCT +
Preference number: 5 (lower is better)
Translates to: STGRHIEPQRWGSAS*TGCTLGPAGLQCVS
Trigger: AGACACGCATTGGAGGCCTGCAGGACCAAGAGTGCATCCCGTGCACGAAGCAGACCCCCACCTCTGAGGTTCAATGTGCCTTCCAGTTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253392.5
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS GCA 90 bp GCAATCCATGGTGGGAAGGCCGGTAACGGACGAGTAGATGGCTCTTaGTCCCAAATGGGACTCCGGTACAAATCCACCTCAGCGCAGAGC +
Preference number: 5 (lower is better)
Translates to: AIHGGKAGNGRVDGS*SQMGLRYKSTSAQS
Trigger: GCTCTGCGCTGAGGTGGATTTGTACCGGAGTCCCATTTGGGAGCAAGAGCCATCTACTCGTCCGTTACCGGCCTTCCCACCATGGATTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374719.8
CDS CCA 90 bp TCCTGTCCAGGACCACACCGTTGGCAGGTGACACACCGTCCCCATTaGTCCCAGTACTCATTTTCTTGGCAATCCATGGTGGGAAGGCCG +
Preference number: 5 (lower is better)
Translates to: SCPGPHRWQVTHRPH*SQYSFSWQSMVGRP
Trigger: CGGCCTTCCCACCATGGATTGCCAAGAAAATGAGTACTGGGACCAATGGGGACGGTGTGTCACCTGCCAACGGTGTGGTCCTGGACAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374719.8
CDS-3UTR CAA 90 bp TGTTGTGGTATAGGAACAGAGTCCAGAGAGAACAACTGGGCAAGGCTGCCAGGGTCAGCACTGGTCTCCTaGCTGGGTGGCACGGGGAAG +
Preference number: 5 (lower is better)
Translates to: CCGIGTESRENNWARLPGSALVS*LGGTGK
Trigger: CTTCCCCGTGCCACCCAGCAAGGAGACCAGTGCTGA...CCCTGGCAGCCTTGCCCAGTTGTTCTCTCTGGACTCTGTTCCTATACCACAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS GCA 90 bp TGTGGTGGCCCCAGCTGCTTTTGTACCTGCGAGGAGGGCAGGCTGTaGAGTAGGCATCTCCACCCTCTCCATAACCACAATCCTTGGATA +
Preference number: 5 (lower is better)
Translates to: CGGPSCFCTCEEGRL*SRHLHPLHNHNPWI
Trigger: TATCCAAGGATTGTGGTTATGGAGAGGGTGGAGATGCCTACTGCACAGCCTGCCCTCCTCGCAGGTACAAAAGCAGCTGGGGCCACCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253392.5
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS CCA 90 bp GGCTGCTCACCAGTGCAACAAGTGTGGCCTCCTGAGGGGGCACTGTaGGTGTATCTGCCTCCACTAAGCTCAACTGGAAGGCACATTGAA +
Preference number: 5 (lower is better)
Translates to: GCSPVQQVWPPEGAL*VYLPPLSSTGRHIE
Trigger: TTCAATGTGCCTTCCAGTTGAGCTTAGTGGAGGCAGATACACCCACAGTGCCCCCTCAGGAGGCCACACTTGTTGCACTGGTGAGCAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253392.5
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS CCA 90 bp TCCTGTCCAGGACCACACCGTTGGCAGGTGACACACCGTCCCCATTaGTCCCAGTACTCATTTTCTTGGCAATCCATGGTGGGAAGGAGT +
Preference number: 5 (lower is better)
Translates to: SCPGPHRWQVTHRPH*SQYSFSWQSMVGRS
Trigger: ACTCCTTCCCACCATGGATTGCCAAGAAAATGAGTACTGGGACCAATGGGGACGGTGTGTCACCTGCCAACGGTGTGGTCCTGGACAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451436.6
CDS-3UTR CAA 90 bp TACAGGGTGAGGCCCCAGGGATCTAGAGGGAAAGTGTTTGCCCTGCCTCATGCTGACACACCGTCCCCATaGGTCCCAGTACTCATTTTC +
Preference number: 5 (lower is better)
Translates to: YRVRPQGSRGKVFALPHADTPSP*VPVLIF
Trigger: GAAAATGAGTACTGGGACCAATGGGGACGGTGTGTC...AGCATGAGGCAGGGCAAACACTTTCCCTCTAGATCCCTGGGGCCTCACCCTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CAA 90 bp TACAGGGTGAGGCCCCAGGGATCTAGAGGGAAAGTGTTTGCCCTGCCTCATGCTCTAGAGGGAAAGTGTTaGCCCTGCCTCATGCTGCAA +
Preference number: 5 (lower is better)
Translates to: YRVRPQGSRGKVFALPHALEGKC*PCLMLQ
Trigger: TTGCAGCATGAGGCAGGGCAAACACTTTCCCTCTAG...AGCATGAGGCAGGGCAAACACTTTCCCTCTAGATCCCTGGGGCCTCACCCTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CAA 90 bp TACAGGGTGAGGCCCCAGGGATCTAGAGGGAAAGTGTTTGCCCTGCCTCATGCTGGCCAGGCTGCTTGCTaGGTACAGGCTTGTATTTCA +
Preference number: 5 (lower is better)
Translates to: YRVRPQGSRGKVFALPHAGQAAC*VQACIS
Trigger: TGAAATACAAGCCTGTACCAAGCAAGCAGCCTGGCC...AGCATGAGGCAGGGCAAACACTTTCCCTCTAGATCCCTGGGGCCTCACCCTGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS GCA 90 bp ACTGGTCTCCTTGCTGGGTGGCACGGGGAAGAGAGATTCCTCCTTTaGTGTTTTATCAGCCTCAAACTGCAGCAAACCTCCACGCTGGCA +
Preference number: 5 (lower is better)
Translates to: TGLLAGWHGEERFLL*CFISLKLQQTSTLA
Trigger: TGCCAGCGTGGAGGTTTGCTGCAGTTTGAGGCTGATAAAACAGCAAAGGAGGAATCTCTCTTCCCCGTGCCACCCAGCAAGGAGACCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374719.8
ENST00000451436.6
CDS-3UTR CAA 90 bp GACAGGGCTGTATGTTGTAGAGGGGTATGCTGTAGTGCTGAATCCTTTCCTAACTCCAGGACCACACCGTaGGCAGGTGACACACCGTCC +
Preference number: 5 (lower is better)
Translates to: DRAVCCRGVCCSAESFPNSRTTP*AGDTPS
Trigger: GGACGGTGTGTCACCTGCCAACGGTGTGGTCCTGGA...GTTAGGAAAGGATTCAGCACTACAGCATACCCCTCTACAACATACAGCCCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CAA 90 bp AGGCCCCTGCTGCTGTTGTGGTATAGGAACAGAGTCCAGAGAGAACAACTGGGCGATGTTCTCACTCACTaGGGACTCAGCACTGGTCTC +
Preference number: 5 (lower is better)
Translates to: RPLLLLWYRNRVQREQLGDVLTH*GLSTGL
Trigger: GAGACCAGTGCTGAGTCCCAAGTGAGTGAGAACATC...GCCCAGTTGTTCTCTCTGGACTCTGTTCCTATACCACAACAGCAGCAGGGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CAA 90 bp TGTTGTGGTATAGGAACAGAGTCCAGAGAGAACAACTGGGCAAGGCTGCCAGGGAGGCCCCTGCTGCTGTaGTGGTATAGGAACAGAGTC +
Preference number: 5 (lower is better)
Translates to: CCGIGTESRENNWARLPGRPLLL*WYRNRV
Trigger: GACTCTGTTCCTATACCACAACAGCAGCAGGGGCCT...CCCTGGCAGCCTTGCCCAGTTGTTCTCTCTGGACTCTGTTCCTATACCACAACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CAA 90 bp TACAGGGTGAGGCCCCAGGGATCTAGAGGGAAAGTGTTTGCCCTGCCTCATGCTATGTCCCTACATGGATaGAGGGCTGTCTTTGAGGGA +
Preference number: 5 (lower is better)
Translates to: YRVRPQGSRGKVFALPHAMSLHG*RAVFEG
Trigger: TCCCTCAAAGACAGCCCTCAATCCATGTAGGGACAT...AGCATGAGGCAGGGCAAACACTTTCCCTCTAGATCCCTGGGGCCTCACCCTGTA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CAA 90 bp AGGCCCCTGCTGCTGTTGTGGTATAGGAACAGAGTCCAGAGAGAACAACTGGGCGTAGACAGCACTCCTTaGCCAGAGCTAGAACCTGGT +
Preference number: 5 (lower is better)
Translates to: RPLLLLWYRNRVQREQLGVDSTP*PELEPG
Trigger: ACCAGGTTCTAGCTCTGGCAAAGGAGTGCTGTCTAC...GCCCAGTTGTTCTCTCTGGACTCTGTTCCTATACCACAACAGCAGCAGGGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CAA 90 bp AGGCCCCTGCTGCTGTTGTGGTATAGGAACAGAGTCCAGAGAGAACAACTGGGCGGCCAGGCTGCTTGCTaGGTACAGGCTTGTATTTCA +
Preference number: 5 (lower is better)
Translates to: RPLLLLWYRNRVQREQLGGQAAC*VQACIS
Trigger: TGAAATACAAGCCTGTACCAAGCAAGCAGCCTGGCC...GCCCAGTTGTTCTCTCTGGACTCTGTTCCTATACCACAACAGCAGCAGGGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CAA 90 bp AGGCCCCTGCTGCTGTTGTGGTATAGGAACAGAGTCCAGAGAGAACAACTGGGCGTGTCAAATGTGGGCTaGAACCACTGCCAGCCACAT +
Preference number: 5 (lower is better)
Translates to: RPLLLLWYRNRVQREQLGVSNVG*NHCQPH
Trigger: ATGTGGCTGGCAGTGGTTCAAGCCCACATTTGACAC...GCCCAGTTGTTCTCTCTGGACTCTGTTCCTATACCACAACAGCAGCAGGGGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CAA 90 bp GACAGGGCTGTATGTTGTAGAGGGGTATGCTGTAGTGCTGAATCCTTTCCTAACGCACGGGATGCACTCTaGGTCCTGCAGGCCTCCAAT +
Preference number: 5 (lower is better)
Translates to: DRAVCCRGVCCSAESFPNARDAL*VLQASN
Trigger: ATTGGAGGCCTGCAGGACCAAGAGTGCATCCCGTGC...GTTAGGAAAGGATTCAGCACTACAGCATACCCCTCTACAACATACAGCCCTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CAA 90 bp CATTATCTTTCCTCTAGAGCAGCAGTGTCAAATGTGGGCTTGAACCACTGCCAGGCACGGGATGCACTCTaGGTCCTGCAGGCCTCCAAT +
Preference number: 5 (lower is better)
Translates to: HYLSSRAAVSNVGLNHCQARDAL*VLQASN
Trigger: ATTGGAGGCCTGCAGGACCAAGAGTGCATCCCGTGC...CTGGCAGTGGTTCAAGCCCACATTTGACACTGCTGCTCTAGAGGAAAGATAATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CAA 90 bp AGCAGCAGTGTCAAATGTGGGCTTGAACCACTGCCAGCCACATGGCAACCTTTGACTTCAAAGGGCACATaGAGCTCCAGCCTGTCTCCA +
Preference number: 5 (lower is better)
Translates to: SSSVKCGLEPLPATWQPLTSKGT*SSSLSP
Trigger: TGGAGACAGGCTGGAGCTCAATGTGCCCTTTGAAGT...CAAAGGTTGCCATGTGGCTGGCAGTGGTTCAAGCCCACATTTGACACTGCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CAA 90 bp TGTTGTGGTATAGGAACAGAGTCCAGAGAGAACAACTGGGCAAGGCTGCCAGGGCTAGAGGGAAAGTGTTaGCCCTGCCTCATGCTGCAA +
Preference number: 5 (lower is better)
Translates to: CCGIGTESRENNWARLPGLEGKC*PCLMLQ
Trigger: TTGCAGCATGAGGCAGGGCAAACACTTTCCCTCTAG...CCCTGGCAGCCTTGCCCAGTTGTTCTCTCTGGACTCTGTTCCTATACCACAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CAA 90 bp AGCAGCAGTGTCAAATGTGGGCTTGAACCACTGCCAGCCACATGGCAACCTTTGGTGTCAAATGTGGGCTaGAACCACTGCCAGCCACAT +
Preference number: 5 (lower is better)
Translates to: SSSVKCGLEPLPATWQPLVSNVG*NHCQPH
Trigger: ATGTGGCTGGCAGTGGTTCAAGCCCACATTTGACAC...CAAAGGTTGCCATGTGGCTGGCAGTGGTTCAAGCCCACATTTGACACTGCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CAA 90 bp AATAGAAAGAGGCATACTCAGATGTCCCTACATGGATTGAGGGCTGTCTTTGAGTCCAGGACCACACCGTaGGCAGGTGACACACCGTCC +
Preference number: 5 (lower is better)
Translates to: NRKRHTQMSLHGLRAVFESRTTP*AGDTPS
Trigger: GGACGGTGTGTCACCTGCCAACGGTGTGGTCCTGGA...CTCAAAGACAGCCCTCAATCCATGTAGGGACATCTGAGTATGCCTCTTTCTATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CAA 90 bp AATAGAAAGAGGCATACTCAGATGTCCCTACATGGATTGAGGGCTGTCTTTGAGTGGCCCCAGCTGCTTTaGTACCTGCGAGGAGGGCAG +
Preference number: 5 (lower is better)
Translates to: NRKRHTQMSLHGLRAVFEWPQLL*YLRGGQ
Trigger: CTGCCCTCCTCGCAGGTACAAAAGCAGCTGGGGCCA...CTCAAAGACAGCCCTCAATCCATGTAGGGACATCTGAGTATGCCTCTTTCTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CAA 90 bp AGGCCCCTGCTGCTGTTGTGGTATAGGAACAGAGTCCAGAGAGAACAACTGGGCCCAGTACTCATTTTCTaGGCAATCCATGGTGGGAAG +
Preference number: 5 (lower is better)
Translates to: RPLLLLWYRNRVQREQLGPVLIF*AIHGGK
Trigger: CTTCCCACCATGGATTGCCAAGAAAATGAGTACTGG...GCCCAGTTGTTCTCTCTGGACTCTGTTCCTATACCACAACAGCAGCAGGGGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CAA 90 bp AGCAGCAGTGTCAAATGTGGGCTTGAACCACTGCCAGCCACATGGCAACCTTTGGATTCTGGGTATGGCTaGGGCTGTCCACATAGCATT +
Preference number: 5 (lower is better)
Translates to: SSSVKCGLEPLPATWQPLDSGYG*GCPHSI
Trigger: AATGCTATGTGGACAGCCCAAGCCATACCCAGAATC...CAAAGGTTGCCATGTGGCTGGCAGTGGTTCAAGCCCACATTTGACACTGCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS GCA 90 bp ACTGGTCTCCTTGCTGGGTGGCACGGGGAAGAGAGATTCCTCCTTTaGTGTTTTATCAGCCTCAAACTGCAGCAAACCTCCTGCAAATTC +
Preference number: 5 (lower is better)
Translates to: TGLLAGWHGEERFLL*CFISLKLQQTSCKF
Trigger: GAATTTGCAGGAGGTTTGCTGCAGTTTGAGGCTGATAAAACAGCAAAGGAGGAATCTCTCTTCCCCGTGCCACCCAGCAAGGAGACCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253392.5
ENST00000396050.5
CDS-3UTR CAA 90 bp ATTATTTTCCCAGGCTCCCTCCTGTCAAAATCCAAGTCAAGGTATATGGAGAGATGGCCCCAGCTGCTTTaGTACCTGCGAGGAGGGCAG +
Preference number: 5 (lower is better)
Translates to: IIFPGSLLSKSKSRYMERWPQLL*YLRGGQ
Trigger: CTGCCCTCCTCGCAGGTACAAAAGCAGCTGGGGCCA...TCTCTCCATATACCTTGACTTGGATTTTGACAGGAGGGAGCCTGGGAAAATAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CAA 90 bp ATTATTTTCCCAGGCTCCCTCCTGTCAAAATCCAAGTCAAGGTATATGGAGAGATCAGCACTGGTCTCCTaGCTGGGTGGCACGGGGAAG +
Preference number: 5 (lower is better)
Translates to: IIFPGSLLSKSKSRYMERSALVS*LGGTGK
Trigger: CTTCCCCGTGCCACCCAGCAAGGAGACCAGTGCTGA...TCTCTCCATATACCTTGACTTGGATTTTGACAGGAGGGAGCCTGGGAAAATAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CAA 90 bp GACAGGGCTGTATGTTGTAGAGGGGTATGCTGTAGTGCTGAATCCTTTCCTAACAGGCCCCTGCTGCTGTaGTGGTATAGGAACAGAGTC +
Preference number: 5 (lower is better)
Translates to: DRAVCCRGVCCSAESFPNRPLLL*WYRNRV
Trigger: GACTCTGTTCCTATACCACAACAGCAGCAGGGGCCT...GTTAGGAAAGGATTCAGCACTACAGCATACCCCTCTACAACATACAGCCCTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CAA 90 bp GTCCCTAAAGTGCTAGGTAGATGTGCCAACACAATTTTGAGAGGCTTACCTGACGTGGGGCCAGGCTGCTaGCTTGGTACAGGCTTGTAT +
Preference number: 5 (lower is better)
Translates to: VPKVLGRCANTILRGLPDVGPGC*LGTGLY
Trigger: ATACAAGCCTGTACCAAGCAAGCAGCCTGGCCCCAC...GTCAGGTAAGCCTCTCAAAATTGTGTTGGCACATCTACCTAGCACTTTAGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CAA 90 bp CATTATCTTTCCTCTAGAGCAGCAGTGTCAAATGTGGGCTTGAACCACTGCCAGGACACACCGTCCCCATaGGTCCCAGTACTCATTTTC +
Preference number: 5 (lower is better)
Translates to: HYLSSRAAVSNVGLNHCQDTPSP*VPVLIF
Trigger: GAAAATGAGTACTGGGACCAATGGGGACGGTGTGTC...CTGGCAGTGGTTCAAGCCCACATTTGACACTGCTGCTCTAGAGGAAAGATAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CAA 90 bp CACCTTTACCCGAAATACTTTAAAATGCAAAGCCAATTGCCACCTCCAATTGCTTGGCCCCAGCTGCTTTaGTACCTGCGAGGAGGGCAG +
Preference number: 5 (lower is better)
Translates to: HLYPKYFKMQSQLPPPIAWPQLL*YLRGGQ
Trigger: CTGCCCTCCTCGCAGGTACAAAAGCAGCTGGGGCCA...AGCAATTGGAGGTGGCAATTGGCTTTGCATTTTAAAGTATTTCGGGTAAAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CAA 90 bp AGACTACAAAAGGGAAGCAAGAAATGCTCCAGATCAGTCCTTGTGAAATGGAGAGCACGGGATGCACTCTaGGTCCTGCAGGCCTCCAAT +
Preference number: 5 (lower is better)
Translates to: RLQKGSKKCSRSVLVKWRARDAL*VLQASN
Trigger: ATTGGAGGCCTGCAGGACCAAGAGTGCATCCCGTGC...TCTCCATTTCACAAGGACTGATCTGGAGCATTTCTTGCTTCCCTTTTGTAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CAA 90 bp CACCTTTACCCGAAATACTTTAAAATGCAAAGCCAATTGCCACCTCCAATTGCTTCAGCACTGGTCTCCTaGCTGGGTGGCACGGGGAAG +
Preference number: 5 (lower is better)
Translates to: HLYPKYFKMQSQLPPPIASALVS*LGGTGK
Trigger: CTTCCCCGTGCCACCCAGCAAGGAGACCAGTGCTGA...AGCAATTGGAGGTGGCAATTGGCTTTGCATTTTAAAGTATTTCGGGTAAAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CAA 90 bp GACAGGGCTGTATGTTGTAGAGGGGTATGCTGTAGTGCTGAATCCTTTCCTAACCTAGAGGGAAAGTGTTaGCCCTGCCTCATGCTGCAA +
Preference number: 5 (lower is better)
Translates to: DRAVCCRGVCCSAESFPNLEGKC*PCLMLQ
Trigger: TTGCAGCATGAGGCAGGGCAAACACTTTCCCTCTAG...GTTAGGAAAGGATTCAGCACTACAGCATACCCCTCTACAACATACAGCCCTGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CAA 90 bp TACAGGGTGAGGCCCCAGGGATCTAGAGGGAAAGTGTTTGCCCTGCCTCATGCTACTCAACTATGGTATTaGCCATGGCCAAACAGAAAT +
Preference number: 5 (lower is better)
Translates to: YRVRPQGSRGKVFALPHATQLWY*PWPNRN
Trigger: ATTTCTGTTTGGCCATGGCAAATACCATAGTTGAGT...AGCATGAGGCAGGGCAAACACTTTCCCTCTAGATCCCTGGGGCCTCACCCTGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CAA 90 bp CATTATCTTTCCTCTAGAGCAGCAGTGTCAAATGTGGGCTTGAACCACTGCCAGAATCTGATCAATTGGTaGCCCCAGGGGCCCTTAATC +
Preference number: 5 (lower is better)
Translates to: HYLSSRAAVSNVGLNHCQNLINW*PQGPLI
Trigger: GATTAAGGGCCCCTGGGGCAACCAATTGATCAGATT...CTGGCAGTGGTTCAAGCCCACATTTGACACTGCTGCTCTAGAGGAAAGATAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CAA 90 bp ATTATTTTCCCAGGCTCCCTCCTGTCAAAATCCAAGTCAAGGTATATGGAGAGAGTGGGGCCAGGCTGCTaGCTTGGTACAGGCTTGTAT +
Preference number: 5 (lower is better)
Translates to: IIFPGSLLSKSKSRYMERVGPGC*LGTGLY
Trigger: ATACAAGCCTGTACCAAGCAAGCAGCCTGGCCCCAC...TCTCTCCATATACCTTGACTTGGATTTTGACAGGAGGGAGCCTGGGAAAATAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CAA 90 bp AGACTACAAAAGGGAAGCAAGAAATGCTCCAGATCAGTCCTTGTGAAATGGAGAGTGGGGCCAGGCTGCTaGCTTGGTACAGGCTTGTAT +
Preference number: 5 (lower is better)
Translates to: RLQKGSKKCSRSVLVKWRVGPGC*LGTGLY
Trigger: ATACAAGCCTGTACCAAGCAAGCAGCCTGGCCCCAC...TCTCCATTTCACAAGGACTGATCTGGAGCATTTCTTGCTTCCCTTTTGTAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CAA 90 bp AGCAGCAGTGTCAAATGTGGGCTTGAACCACTGCCAGCCACATGGCAACCTTTGCCAAGGCCTAAAACCTaGGTTACCACATATTTGCTA +
Preference number: 5 (lower is better)
Translates to: SSSVKCGLEPLPATWQPLPRPKT*VTTYLL
Trigger: TAGCAAATATGTGGTAACCAAGGTTTTAGGCCTTGG...CAAAGGTTGCCATGTGGCTGGCAGTGGTTCAAGCCCACATTTGACACTGCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CAA 90 bp TGTTGTGGTATAGGAACAGAGTCCAGAGAGAACAACTGGGCAAGGCTGCCAGGGCCAAGGCCTAAAACCTaGGTTACCACATATTTGCTA +
Preference number: 5 (lower is better)
Translates to: CCGIGTESRENNWARLPGPRPKT*VTTYLL
Trigger: TAGCAAATATGTGGTAACCAAGGTTTTAGGCCTTGG...CCCTGGCAGCCTTGCCCAGTTGTTCTCTCTGGACTCTGTTCCTATACCACAACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CAA 90 bp AGCAGCAGTGTCAAATGTGGGCTTGAACCACTGCCAGCCACATGGCAACCTTTGAAAATGCAAAGCCAATaGCCACCTCCAATTGCTGAA +
Preference number: 5 (lower is better)
Translates to: SSSVKCGLEPLPATWQPLKMQSQ*PPPIAE
Trigger: TTCAGCAATTGGAGGTGGCAATTGGCTTTGCATTTT...CAAAGGTTGCCATGTGGCTGGCAGTGGTTCAAGCCCACATTTGACACTGCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CAA 90 bp AGGCCCCTGCTGCTGTTGTGGTATAGGAACAGAGTCCAGAGAGAACAACTGGGCACTCAACTATGGTATTaGCCATGGCCAAACAGAAAT +
Preference number: 5 (lower is better)
Translates to: RPLLLLWYRNRVQREQLGTQLWY*PWPNRN
Trigger: ATTTCTGTTTGGCCATGGCAAATACCATAGTTGAGT...GCCCAGTTGTTCTCTCTGGACTCTGTTCCTATACCACAACAGCAGCAGGGGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CAA 90 bp ATTATTTTCCCAGGCTCCCTCCTGTCAAAATCCAAGTCAAGGTATATGGAGAGACAACTGGAAGGCACATaGAACCTCAGAGGTGGGGGT +
Preference number: 5 (lower is better)
Translates to: IIFPGSLLSKSKSRYMERQLEGT*NLRGGG
Trigger: ACCCCCACCTCTGAGGTTCAATGTGCCTTCCAGTTG...TCTCTCCATATACCTTGACTTGGATTTTGACAGGAGGGAGCCTGGGAAAATAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CAA 90 bp AGACTACAAAAGGGAAGCAAGAAATGCTCCAGATCAGTCCTTGTGAAATGGAGAGACACACCGTCCCCATaGGTCCCAGTACTCATTTTC +
Preference number: 5 (lower is better)
Translates to: RLQKGSKKCSRSVLVKWRDTPSP*VPVLIF
Trigger: GAAAATGAGTACTGGGACCAATGGGGACGGTGTGTC...TCTCCATTTCACAAGGACTGATCTGGAGCATTTCTTGCTTCCCTTTTGTAGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CAA 90 bp GTCCCTAAAGTGCTAGGTAGATGTGCCAACACAATTTTGAGAGGCTTACCTGACCCAGTACTCATTTTCTaGGCAATCCATGGTGGGAAG +
Preference number: 5 (lower is better)
Translates to: VPKVLGRCANTILRGLPDPVLIF*AIHGGK
Trigger: CTTCCCACCATGGATTGCCAAGAAAATGAGTACTGG...GTCAGGTAAGCCTCTCAAAATTGTGTTGGCACATCTACCTAGCACTTTAGGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CAA 90 bp GACAGGGCTGTATGTTGTAGAGGGGTATGCTGTAGTGCTGAATCCTTTCCTAACAAAGGGGAGAAGGGTTaGATTTTGTCCCTAAAGTGC +
Preference number: 5 (lower is better)
Translates to: DRAVCCRGVCCSAESFPNKGEKG*ILSLKC
Trigger: GCACTTTAGGGACAAAATCAAACCCTTCTCCCCTTT...GTTAGGAAAGGATTCAGCACTACAGCATACCCCTCTACAACATACAGCCCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CAA 90 bp AATAGAAAGAGGCATACTCAGATGTCCCTACATGGATTGAGGGCTGTCTTTGAGATGTCCCTACATGGATaGAGGGCTGTCTTTGAGGGA +
Preference number: 5 (lower is better)
Translates to: NRKRHTQMSLHGLRAVFEMSLHG*RAVFEG
Trigger: TCCCTCAAAGACAGCCCTCAATCCATGTAGGGACAT...CTCAAAGACAGCCCTCAATCCATGTAGGGACATCTGAGTATGCCTCTTTCTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CAA 90 bp ATTATTTTCCCAGGCTCCCTCCTGTCAAAATCCAAGTCAAGGTATATGGAGAGAGTAGACAGCACTCCTTaGCCAGAGCTAGAACCTGGT +
Preference number: 5 (lower is better)
Translates to: IIFPGSLLSKSKSRYMERVDSTP*PELEPG
Trigger: ACCAGGTTCTAGCTCTGGCAAAGGAGTGCTGTCTAC...TCTCTCCATATACCTTGACTTGGATTTTGACAGGAGGGAGCCTGGGAAAATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CAA 90 bp GACAGGGCTGTATGTTGTAGAGGGGTATGCTGTAGTGCTGAATCCTTTCCTAACTTGGTTACCACATATTaGCTAATACCTGTGTGGGGC +
Preference number: 5 (lower is better)
Translates to: DRAVCCRGVCCSAESFPNLVTTY*LIPVWG
Trigger: GCCCCACACAGGTATTAGCAAATATGTGGTAACCAA...GTTAGGAAAGGATTCAGCACTACAGCATACCCCTCTACAACATACAGCCCTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CAA 90 bp CATTATCTTTCCTCTAGAGCAGCAGTGTCAAATGTGGGCTTGAACCACTGCCAGTTGGTTACCACATATTaGCTAATACCTGTGTGGGGC +
Preference number: 5 (lower is better)
Translates to: HYLSSRAAVSNVGLNHCQLVTTY*LIPVWG
Trigger: GCCCCACACAGGTATTAGCAAATATGTGGTAACCAA...CTGGCAGTGGTTCAAGCCCACATTTGACACTGCTGCTCTAGAGGAAAGATAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CAA 90 bp ATTATTTTCCCAGGCTCCCTCCTGTCAAAATCCAAGTCAAGGTATATGGAGAGAGTGTCAAATGTGGGCTaGAACCACTGCCAGCCACAT +
Preference number: 5 (lower is better)
Translates to: IIFPGSLLSKSKSRYMERVSNVG*NHCQPH
Trigger: ATGTGGCTGGCAGTGGTTCAAGCCCACATTTGACAC...TCTCTCCATATACCTTGACTTGGATTTTGACAGGAGGGAGCCTGGGAAAATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CAA 90 bp GACAGGGCTGTATGTTGTAGAGGGGTATGCTGTAGTGCTGAATCCTTTCCTAACCCAAGGCCTAAAACCTaGGTTACCACATATTTGCTA +
Preference number: 5 (lower is better)
Translates to: DRAVCCRGVCCSAESFPNPRPKT*VTTYLL
Trigger: TAGCAAATATGTGGTAACCAAGGTTTTAGGCCTTGG...GTTAGGAAAGGATTCAGCACTACAGCATACCCCTCTACAACATACAGCCCTGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS TCA 90 bp TGGTGGGAAGGAGTATATGAAATTCCTTGTAATCAAAGTTCCGCTTaGCTCATTTCACATCCACGTGTAGCAACAACAGCCCAAACCCTC +
Preference number: 5 (lower is better)
Translates to: WWEGVYEIPCNQSSA*LISHPRVATTAQTL
Trigger: GAGGGTTTGGGCTGTTGTTGCTACACGTGGATGTGAAATGAGTCAAGCGGAACTTTGATTACAAGGAATTTCATATACTCCTTCCCACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451436.6
CDS CCA 90 bp CTGCAGCAAACCTCCTGCAAATTCAGGTATCAGATTGAGGCTAGCTaGTACTGGATCAGAGAAAATAATCAATTTCTCACGCTGGCAATG +
Preference number: 5 (lower is better)
Translates to: LQQTSCKFRYQIEAS*YWIRENNQFLTLAM
Trigger: CATTGCCAGCGTGAGAAATTGATTATTTTCTCTGATCCAGTACCAGCTAGCCTCAATCTGATACCTGAATTTGCAGGAGGTTTGCTGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253392.5
ENST00000396050.5
CDS-3UTR CAA 90 bp GAAGTGCACATTCTGCCTAATGTACTTAATAAACCACTTAATAGTTGTGGGACACAACTGGAAGGCACATaGAACCTCAGAGGTGGGGGT +
Preference number: 5 (lower is better)
Translates to: EVHILPNVLNKPLNSCGTQLEGT*NLRGGG
Trigger: ACCCCCACCTCTGAGGTTCAATGTGCCTTCCAGTTG...TGTCCCACAACTATTAAGTGGTTTATTAAGTACATTAGGCAGAATGTGCACTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CAA 90 bp CACCTTTACCCGAAATACTTTAAAATGCAAAGCCAATTGCCACCTCCAATTGCTGATTCTGGGTATGGCTaGGGCTGTCCACATAGCATT +
Preference number: 5 (lower is better)
Translates to: HLYPKYFKMQSQLPPPIADSGYG*GCPHSI
Trigger: AATGCTATGTGGACAGCCCAAGCCATACCCAGAATC...AGCAATTGGAGGTGGCAATTGGCTTTGCATTTTAAAGTATTTCGGGTAAAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CAA 90 bp GAAGTGCACATTCTGCCTAATGTACTTAATAAACCACTTAATAGTTGTGGGACAACTTCAAAGGGCACATaGAGCTCCAGCCTGTCTCCA +
Preference number: 5 (lower is better)
Translates to: EVHILPNVLNKPLNSCGTTSKGT*SSSLSP
Trigger: TGGAGACAGGCTGGAGCTCAATGTGCCCTTTGAAGT...TGTCCCACAACTATTAAGTGGTTTATTAAGTACATTAGGCAGAATGTGCACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CAA 90 bp TATTATTACTGTGTTACCATCATTATCTTTCCTCTAGAGCAGCAGTGTCAAATGAGGCCCCTGCTGCTGTaGTGGTATAGGAACAGAGTC +
Preference number: 5 (lower is better)
Translates to: YYYCVTIIIFPLEQQCQMRPLLL*WYRNRV
Trigger: GACTCTGTTCCTATACCACAACAGCAGCAGGGGCCT...CATTTGACACTGCTGCTCTAGAGGAAAGATAATGATGGTAACACAGTAATAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CAA 90 bp ATTATTTTCCCAGGCTCCCTCCTGTCAAAATCCAAGTCAAGGTATATGGAGAGAAAAGGGGAGAAGGGTTaGATTTTGTCCCTAAAGTGC +
Preference number: 5 (lower is better)
Translates to: IIFPGSLLSKSKSRYMERKGEKG*ILSLKC
Trigger: GCACTTTAGGGACAAAATCAAACCCTTCTCCCCTTT...TCTCTCCATATACCTTGACTTGGATTTTGACAGGAGGGAGCCTGGGAAAATAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CAA 90 bp AATAGAAAGAGGCATACTCAGATGTCCCTACATGGATTGAGGGCTGTCTTTGAGAAAATGCAAAGCCAATaGCCACCTCCAATTGCTGAA +
Preference number: 5 (lower is better)
Translates to: NRKRHTQMSLHGLRAVFEKMQSQ*PPPIAE
Trigger: TTCAGCAATTGGAGGTGGCAATTGGCTTTGCATTTT...CTCAAAGACAGCCCTCAATCCATGTAGGGACATCTGAGTATGCCTCTTTCTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS CCA 90 bp CAAACCTCCTGCAAATTCAGGTATCAGATTGAGGCTAGCTGGTACTaGATCAGAGAAAATAATCAATTTCTCACGCTGGCAATGTCTGTT +
Preference number: 5 (lower is better)
Translates to: QTSCKFRYQIEASWY*IRENNQFLTLAMSV
Trigger: AACAGACATTGCCAGCGTGAGAAATTGATTATTTTCTCTGATCCAGTACCAGCTAGCCTCAATCTGATACCTGAATTTGCAGGAGGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253392.5
ENST00000396050.5
CDS-3UTR CAA 90 bp TATTATTACTGTGTTACCATCATTATCTTTCCTCTAGAGCAGCAGTGTCAAATGGATGTTCTCACTCACTaGGGACTCAGCACTGGTCTC +
Preference number: 5 (lower is better)
Translates to: YYYCVTIIIFPLEQQCQMDVLTH*GLSTGL
Trigger: GAGACCAGTGCTGAGTCCCAAGTGAGTGAGAACATC...CATTTGACACTGCTGCTCTAGAGGAAAGATAATGATGGTAACACAGTAATAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CAA 90 bp CACCTTTACCCGAAATACTTTAAAATGCAAAGCCAATTGCCACCTCCAATTGCTTGTGCCAACACAATTTaGAGAGGCTTACCTGACCAA +
Preference number: 5 (lower is better)
Translates to: HLYPKYFKMQSQLPPPIACANTI*RGLPDQ
Trigger: TTGGTCAGGTAAGCCTCTCAAAATTGTGTTGGCACA...AGCAATTGGAGGTGGCAATTGGCTTTGCATTTTAAAGTATTTCGGGTAAAGGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CAA 90 bp TATTATTACTGTGTTACCATCATTATCTTTCCTCTAGAGCAGCAGTGTCAAATGGTAGACAGCACTCCTTaGCCAGAGCTAGAACCTGGT +
Preference number: 5 (lower is better)
Translates to: YYYCVTIIIFPLEQQCQMVDSTP*PELEPG
Trigger: ACCAGGTTCTAGCTCTGGCAAAGGAGTGCTGTCTAC...CATTTGACACTGCTGCTCTAGAGGAAAGATAATGATGGTAACACAGTAATAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CAA 90 bp AATACTTTAAAATGCAAAGCCAATTGCCACCTCCAATTGCTGAACCTCAAAAAGAATCTGATCAATTGGTaGCCCCAGGGGCCCTTAATC +
Preference number: 5 (lower is better)
Translates to: NTLKCKANCHLQLLNLKKNLINW*PQGPLI
Trigger: GATTAAGGGCCCCTGGGGCAACCAATTGATCAGATT...CTTTTTGAGGTTCAGCAATTGGAGGTGGCAATTGGCTTTGCATTTTAAAGTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CAA 90 bp AATACTTTAAAATGCAAAGCCAATTGCCACCTCCAATTGCTGAACCTCAAAAAGCCAGTACTCATTTTCTaGGCAATCCATGGTGGGAAG +
Preference number: 5 (lower is better)
Translates to: NTLKCKANCHLQLLNLKKPVLIF*AIHGGK
Trigger: CTTCCCACCATGGATTGCCAAGAAAATGAGTACTGG...CTTTTTGAGGTTCAGCAATTGGAGGTGGCAATTGGCTTTGCATTTTAAAGTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CAA 90 bp ATTATTTTCCCAGGCTCCCTCCTGTCAAAATCCAAGTCAAGGTATATGGAGAGATACAATGGGACCTTTTaGCTTTTTCCCAAGTCCTTT +
Preference number: 5 (lower is better)
Translates to: IIFPGSLLSKSKSRYMERYNGTF*LFPKSF
Trigger: AAAGGACTTGGGAAAAAGCAAAAAGGTCCCATTGTA...TCTCTCCATATACCTTGACTTGGATTTTGACAGGAGGGAGCCTGGGAAAATAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CAA 90 bp AATACTTTAAAATGCAAAGCCAATTGCCACCTCCAATTGCTGAACCTCAAAAAGAATTCAGGTATCAGATaGAGGCTAGCTGGTACTGGA +
Preference number: 5 (lower is better)
Translates to: NTLKCKANCHLQLLNLKKNSGIR*RLAGTG
Trigger: TCCAGTACCAGCTAGCCTCAATCTGATACCTGAATT...CTTTTTGAGGTTCAGCAATTGGAGGTGGCAATTGGCTTTGCATTTTAAAGTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000396050.5
CDS-3UTR CAA 90 bp GAAGTGCACATTCTGCCTAATGTACTTAATAAACCACTTAATAGTTGTGGGACATGTGCCAACACAATTTaGAGAGGCTTACCTGACCAA +
Preference number: 5 (lower is better)
Translates to: EVHILPNVLNKPLNSCGTCANTI*RGLPDQ
Trigger: TTGGTCAGGTAAGCCTCTCAAAATTGTGTTGGCACA...TGTCCCACAACTATTAAGTGGTTTATTAAGTACATTAGGCAGAATGTGCACTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CAA 90 bp AATACTTTAAAATGCAAAGCCAATTGCCACCTCCAATTGCTGAACCTCAAAAAGTTGGTTACCACATATTaGCTAATACCTGTGTGGGGC +
Preference number: 5 (lower is better)
Translates to: NTLKCKANCHLQLLNLKKLVTTY*LIPVWG
Trigger: GCCCCACACAGGTATTAGCAAATATGTGGTAACCAA...CTTTTTGAGGTTCAGCAATTGGAGGTGGCAATTGGCTTTGCATTTTAAAGTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CAA 90 bp TATTATTACTGTGTTACCATCATTATCTTTCCTCTAGAGCAGCAGTGTCAAATGTGTGCCAACACAATTTaGAGAGGCTTACCTGACCAA +
Preference number: 5 (lower is better)
Translates to: YYYCVTIIIFPLEQQCQMCANTI*RGLPDQ
Trigger: TTGGTCAGGTAAGCCTCTCAAAATTGTGTTGGCACA...CATTTGACACTGCTGCTCTAGAGGAAAGATAATGATGGTAACACAGTAATAATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CAA 90 bp AATACTTTAAAATGCAAAGCCAATTGCCACCTCCAATTGCTGAACCTCAAAAAGAAAATGCAAAGCCAATaGCCACCTCCAATTGCTGAA +
Preference number: 5 (lower is better)
Translates to: NTLKCKANCHLQLLNLKKKMQSQ*PPPIAE
Trigger: TTCAGCAATTGGAGGTGGCAATTGGCTTTGCATTTT...CTTTTTGAGGTTCAGCAATTGGAGGTGGCAATTGGCTTTGCATTTTAAAGTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CAA 90 bp GAAGTGCACATTCTGCCTAATGTACTTAATAAACCACTTAATAGTTGTGGGACATACAATGGGACCTTTTaGCTTTTTCCCAAGTCCTTT +
Preference number: 5 (lower is better)
Translates to: EVHILPNVLNKPLNSCGTYNGTF*LFPKSF
Trigger: AAAGGACTTGGGAAAAAGCAAAAAGGTCCCATTGTA...TGTCCCACAACTATTAAGTGGTTTATTAAGTACATTAGGCAGAATGTGCACTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS-3UTR CAA 90 bp TATTATTACTGTGTTACCATCATTATCTTTCCTCTAGAGCAGCAGTGTCAAATGACTCAACTATGGTATTaGCCATGGCCAAACAGAAAT +
Preference number: 5 (lower is better)
Translates to: YYYCVTIIIFPLEQQCQMTQLWY*PWPNRN
Trigger: ATTTCTGTTTGGCCATGGCAAATACCATAGTTGAGT...CATTTGACACTGCTGCTCTAGAGGAAAGATAATGATGGTAACACAGTAATAATA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS GCA 72 bp GAACCTCAGAGGTGGGGGTCTGCTTCGTGCACGGGATaGACTCTTGGTCCTGCAGGCCTCCAATGCGTGTCT +
Preference number: 6 (lower is better)
Translates to: EPQRWGSASCTG*TLGPAGLQCVS
Trigger: AGACACGCATTGGAGGCCTGCAGGACCAAGAGTGCATCCCGTGCACGAAGCAGACCCCCACCTCTGAGGTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253392.5
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS CCA 72 bp TCCAGCTCTGTGCATTCGATGGGGCTGTGGACCCAGTaGGAGTGGCTCTCTGAGGTGCAGGAGGCCATGGTA +
Preference number: 6 (lower is better)
Translates to: SSSVHSMGLWTQ*EWLSEVQEAMV
Trigger: TACCATGGCCTCCTGCACCTCAGAGAGCCACTCCCACTGGGTCCACAGCCCCATCGAATGCACAGAGCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253392.5
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS GCA 72 bp AGGCACATTGAACCTCAGAGGTGGGGGTCTGCTTCGTaGACGGGATGCACTCTTGGTCCTGCAGGCCTCCAA +
Preference number: 6 (lower is better)
Translates to: RHIEPQRWGSAS*TGCTLGPAGLQ
Trigger: TTGGAGGCCTGCAGGACCAAGAGTGCATCCCGTGCACGAAGCAGACCCCCACCTCTGAGGTTCAATGTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253392.5
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS CCA 72 bp ACACCACTAGCAGGCTGCTCACCAGTGCAACAAGTGTaGCCTCCTGAGGGGGCACTGTGGGTGTATCTGCCT +
Preference number: 6 (lower is better)
Translates to: TPLAGCSPVQQV*PPEGALWVYLP
Trigger: AGGCAGATACACCCACAGTGCCCCCTCAGGAGGCCACACTTGTTGCACTGGTGAGCAGCCTGCTAGTGGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253392.5
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS CCA 72 bp TTTTGCAGGTCCAGCTCTGTGCATTCGATGGGGCTGTaGACCCAGTGGGAGTGGCTCTCTGAGGTGCAGGAG +
Preference number: 6 (lower is better)
Translates to: FCRSSSVHSMGL*TQWEWLSEVQE
Trigger: CTCCTGCACCTCAGAGAGCCACTCCCACTGGGTCCACAGCCCCATCGAATGCACAGAGCTGGACCTGCAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253392.5
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS CAA 72 bp AGAGGTGGGGGTCTGCTTCGTGCACGGGATGCACTCTaGGTCCTGCAGGCCTCCAATGCGTGTCTTTCGGTA +
Preference number: 6 (lower is better)
Translates to: RGGGLLRARDAL*VLQASNACLSV
Trigger: TACCGAAAGACACGCATTGGAGGCCTGCAGGACCAAGAGTGCATCCCGTGCACGAAGCAGACCCCCACCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253392.5
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS CAA 90 bp TTGAACCTCAGAGGTGGGGGTCTGCTTCGTGCACGGGATGCACTCTaGGTCCTGCAGGCCTCCAATGCGTGTCTTTCGGTAGAACCTGGG +
Preference number: 6 (lower is better)
Translates to: LNLRGGGLLRARDAL*VLQASNACLSVEPG
Trigger: CCCAGGTTCTACCGAAAGACACGCATTGGAGGCCTGCAGGACCAAGAGTGCATCCCGTGCACGAAGCAGACCCCCACCTCTGAGGTTCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253392.5
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS GCA 72 bp TGCACGGGATGCACTCTTGGTCCTGCAGGCCTCCAATaGGTGTCTTTCGGTAGAACCTGGGCAAACAGTCCC +
Preference number: 6 (lower is better)
Translates to: CTGCTLGPAGLQ*VSFGRTWANSP
Trigger: GGGACTGTTTGCCCAGGTTCTACCGAAAGACACGCATTGGAGGCCTGCAGGACCAAGAGTGCATCCCGTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253392.5
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS CCA 72 bp CCAGTGCAACAAGTGTGGCCTCCTGAGGGGGCACTGTaGGTGTATCTGCCTCCACTAAGCTCAACTGGAAGG +
Preference number: 6 (lower is better)
Translates to: PVQQVWPPEGAL*VYLPPLSSTGR
Trigger: CCTTCCAGTTGAGCTTAGTGGAGGCAGATACACCCACAGTGCCCCCTCAGGAGGCCACACTTGTTGCACTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000253392.5
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS GCA 72 bp CCCAGCTGCTTTTGTACCTGCGAGGAGGGCAGGCTGTaGAGTAGGCATCTCCACCCTCTCCATAACCACAAT +
Preference number: 6 (lower is better)
Translates to: PSCFCTCEEGRL*SRHLHPLHNHN
Trigger: ATTGTGGTTATGGAGAGGGTGGAGATGCCTACTGCACAGCCTGCCCTCCTCGCAGGTACAAAAGCAGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253392.5
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS GCA 72 bp GGTGGGAAGGCCGGTAACGGACGAGTAGATGGCTCTTaGTCCCAAATGGGACTCCGGTACAAATCCACCTCA +
Preference number: 6 (lower is better)
Translates to: GGKAGNGRVDGS*SQMGLRYKSTS
Trigger: TGAGGTGGATTTGTACCGGAGTCCCATTTGGGAGCAAGAGCCATCTACTCGTCCGTTACCGGCCTTCCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374719.8
CDS CAA 90 bp CACTGGTCTCCTTGCTGGGTGGCACGGGGAAGAGAGATTCCTCCTTaGCTGTTTTATCAGCCTCAAACTGCAGCAAACCTCCACGCTGGC +
Preference number: 6 (lower is better)
Translates to: HWSPCWVARGREIPP*LFYQPQTAANLHAG
Trigger: GCCAGCGTGGAGGTTTGCTGCAGTTTGAGGCTGATAAAACAGCAAAGGAGGAATCTCTCTTCCCCGTGCCACCCAGCAAGGAGACCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374719.8
ENST00000451436.6
CDS CCA 72 bp CTAAGCTCAACTGGAAGGCACATTGAACCTCAGAGGTaGGGGTCTGCTTCGTGCACGGGATGCACTCTTGGT +
Preference number: 6 (lower is better)
Translates to: LSSTGRHIEPQR*GSASCTGCTLG
Trigger: ACCAAGAGTGCATCCCGTGCACGAAGCAGACCCCCACCTCTGAGGTTCAATGTGCCTTCCAGTTGAGCTTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000253392.5
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS CCA 72 bp ACACACCGTCCCCATTGGTCCCAGTACTCATTTTCTTaGCAATCCATGGTGGGAAGGCCGGTAACGGACGAG +
Preference number: 6 (lower is better)
Translates to: THRPHWSQYSFS*QSMVGRPVTDE
Trigger: CTCGTCCGTTACCGGCCTTCCCACCATGGATTGCCAAGAAAATGAGTACTGGGACCAATGGGGACGGTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374719.8
CDS CCA 72 bp GGACCACACCGTTGGCAGGTGACACACCGTCCCCATTaGTCCCAGTACTCATTTTCTTGGCAATCCATGGTG +
Preference number: 6 (lower is better)
Translates to: GPHRWQVTHRPH*SQYSFSWQSMV
Trigger: CACCATGGATTGCCAAGAAAATGAGTACTGGGACCAATGGGGACGGTGTGTCACCTGCCAACGGTGTGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS CAA 72 bp GACACACCGTCCCCATTGGTCCCAGTACTCATTTTCTaGGCAATCCATGGTGGGAAGGCCGGTAACGGACGA +
Preference number: 6 (lower is better)
Translates to: DTPSPLVPVLIF*AIHGGKAGNGR
Trigger: TCGTCCGTTACCGGCCTTCCCACCATGGATTGCCAAGAAAATGAGTACTGGGACCAATGGGGACGGTGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374719.8
CDS CAA 72 bp CTCAGCTCCAGTATAGGAGGCAGAGCTGGAAAACTTTaGCAGGTCCAGCTCTGTGCATTCGATGGGGCTGTG +
Preference number: 6 (lower is better)
Translates to: LSSSIGGRAGKL*QVQLCAFDGAV
Trigger: CACAGCCCCATCGAATGCACAGAGCTGGACCTGCAAAAGTTTTCCAGCTCTGCCTCCTATACTGGAGCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000253392.5
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS CCA 72 bp AGTCGAGCTGCAGTCGTCCTCGAGGATAGGGTTAAGTaGCTGGGTCTGAAAGATGTTCTCACTCACTTGGGA +
Preference number: 6 (lower is better)
Translates to: SRAAVVLEDRVK*LGLKDVLTHLG
Trigger: TCCCAAGTGAGTGAGAACATCTTTCAGACCCAGCCACTTAACCCTATCCTCGAGGACGACTGCAGCTCGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253392.5
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS CAA 90 bp CACTGGTCTCCTTGCTGGGTGGCACGGGGAAGAGAGATTCCTCCTTaGCTGTTTTATCAGCCTCAAACTGCAGCAAACCTCCTGCAAATT +
Preference number: 6 (lower is better)
Translates to: HWSPCWVARGREIPP*LFYQPQTAANLLQI
Trigger: AATTTGCAGGAGGTTTGCTGCAGTTTGAGGCTGATAAAACAGCAAAGGAGGAATCTCTCTTCCCCGTGCCACCCAGCAAGGAGACCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000253392.5
ENST00000396050.5
CDS TCA 72 bp CAAACTGCAGCAAACCTCCACGCTGGCAATGTCTGTTaGAGAACTGCTTGCAGTAGAGGAAGAAGAGCCCCA +
Preference number: 6 (lower is better)
Translates to: QTAANLHAGNVC*RTACSRGRRAP
Trigger: TGGGGCTCTTCTTCCTCTACTGCAAGCAGTTCTTCAACAGACATTGCCAGCGTGGAGGTTTGCTGCAGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374719.8
ENST00000451436.6
CDS TCA 72 bp CAGACAGCATTAGAGGTAGCTGTGCAGTTGACCTTCTaGACACGATTGATGACAGCACAGGTGATGCAACTC +
Preference number: 6 (lower is better)
Translates to: QTALEVAVQLTF*TRLMTAQVMQL
Trigger: GAGTTGCATCACCTGTGCTGTCATCAATCGTGTTCAGAAGGTCAACTGCACAGCTACCTCTAATGCTGTCTG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000253392.5
ENST00000374719.8
ENST00000396050.5
ENST00000451436.6
CDS GCA 72 bp AGAGATTCCTCCTTTGCTGTTTTATCAGCCTCAAACTaGAGCAAACCTCCACGCTGGCAATGTCTGTTGAAG +
Preference number: 6 (lower is better)
Translates to: RDSSFAVLSASN*SKPPRWQCLLK
Trigger: CTTCAACAGACATTGCCAGCGTGGAGGTTTGCTGCAGTTTGAGGCTGATAAAACAGCAAAGGAGGAATCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374719.8
ENST00000451436.6
CDS GCA 72 bp AGAGATTCCTCCTTTGCTGTTTTATCAGCCTCAAACTaGAGCAAACCTCCTGCAAATTCAGGTATCAGATTG +
Preference number: 6 (lower is better)
Translates to: RDSSFAVLSASN*SKPPANSGIRL
Trigger: CAATCTGATACCTGAATTTGCAGGAGGTTTGCTGCAGTTTGAGGCTGATAAAACAGCAAAGGAGGAATCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253392.5
ENST00000396050.5
CDS TCA 72 bp GGAGTATATGAAATTCCTTGTAATCAAAGTTCCGCTTaGCTCATTTCACATCCACGTGTAGCAACAACAGCC +
Preference number: 6 (lower is better)
Translates to: GVYEIPCNQSSA*LISHPRVATTA
Trigger: GGCTGTTGTTGCTACACGTGGATGTGAAATGAGTCAAGCGGAACTTTGATTACAAGGAATTTCATATACTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451436.6
CDS CCA 72 bp ACCTCCTGCAAATTCAGGTATCAGATTGAGGCTAGCTaGTACTGGATCAGAGAAAATAATCAATTTCTCACG +
Preference number: 6 (lower is better)
Translates to: TSCKFRYQIEAS*YWIRENNQFLT
Trigger: CGTGAGAAATTGATTATTTTCTCTGATCCAGTACCAGCTAGCCTCAATCTGATACCTGAATTTGCAGGAGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000253392.5
ENST00000396050.5