RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EDA (Homo sapiens)

Ensembl gene IDs: ENSG00000158813

Ensembl transcript IDs: ENST00000338901.4, ENST00000374548.5, ENST00000374552.9, ENST00000374553.6, ENST00000502251.5, ENST00000510681.2, ENST00000524573.5, ENST00000525810.5, ENST00000527388.5, ENST00000530321.1, ENST00000533317.5, ENST00000616899.1

Found 971 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TTCTCCCTTGCTCGCCTGGTCCCTCCCTGGTCCTGCCCTCTAAATTaGCTCGAGGTTGCTGAGTGCTCCCAGGCCCCTGTGGCGGAGGGC +
Preference number: 1 (lower is better)
Translates to: FSLARLVPPWSCPLN*LEVAECSQAPVAEG
Trigger: GCCCTCCGCCACAGGGGCCTGGGAGCACTCAGCAACCTCGAGCCAATTTAGAGGGCAGGACCAGGGAGGGACCAGGCGAGCAAGGGAGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338901.4
3UTR CCA 90 bp CGGGCGCGCGCGAGACTTTCCAAGTCAAGGGGTCCCCAGGGAGTCTaGATTAGCTGGGCCAGGGACCGAAGACAACCTGCCCTGGGCAAC +
Preference number: 1 (lower is better)
Translates to: RARARLSKSRGPQGV*ISWARDRRQPALGN
Trigger: GTTGCCCAGGGCAGGTTGTCTTCGGTCCCTGGCCCAGCTAATCCAGACTCCCTGGGGACCCCTTGACTTGGAAAGTCTCGCGCGCGCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338901.4
3UTR GCA 90 bp GCCCTGGGCAACTTCTCCCTTGCTCGCCTGGTCCCTCCCTGGTCCTaGCCTCTAAATTGGCTCGAGGTTGCTGAGTGCTCCCAGGCCCCT +
Preference number: 1 (lower is better)
Translates to: ALGNFSLARLVPPWS*PLNWLEVAECSQAP
Trigger: AGGGGCCTGGGAGCACTCAGCAACCTCGAGCCAATTTAGAGGGCAGGACCAGGGAGGGACCAGGCGAGCAAGGGAGAAGTTGCCCAGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338901.4
3UTR GCA 90 bp CTGGGCCAGGGACCGAAGACAACCTGCCCTGGGCAACTTCTCCCTTaGTCGCCTGGTCCCTCCCTGGTCCTGCCCTCTAAATTGGCTCGA +
Preference number: 1 (lower is better)
Translates to: LGQGPKTTCPGQLLP*SPGPSLVLPSKLAR
Trigger: TCGAGCCAATTTAGAGGGCAGGACCAGGGAGGGACCAGGCGAGCAAGGGAGAAGTTGCCCAGGGCAGGTTGTCTTCGGTCCCTGGCCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338901.4
3UTR CCA 90 bp CAACCTGCCCTGGGCAACTTCTCCCTTGCTCGCCTGGTCCCTCCCTaGTCCTGCCCTCTAAATTGGCTCGAGGTTGCTGAGTGCTCCCAG +
Preference number: 1 (lower is better)
Translates to: QPALGNFSLARLVPP*SCPLNWLEVAECSQ
Trigger: CTGGGAGCACTCAGCAACCTCGAGCCAATTTAGAGGGCAGGACCAGGGAGGGACCAGGCGAGCAAGGGAGAAGTTGCCCAGGGCAGGTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338901.4
3UTR CCA 90 bp GCGAGACTTTCCAAGTCAAGGGGTCCCCAGGGAGTCTGGATTAGCTaGGCCAGGGACCGAAGACAACCTGCCCTGGGCAACTTCTCCCTT +
Preference number: 1 (lower is better)
Translates to: ARLSKSRGPQGVWIS*ARDRRQPALGNFSL
Trigger: AAGGGAGAAGTTGCCCAGGGCAGGTTGTCTTCGGTCCCTGGCCCAGCTAATCCAGACTCCCTGGGGACCCCTTGACTTGGAAAGTCTCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338901.4
3UTR CCA 90 bp TTCCCAAAGCCCAGCAAGCTGCCACGGTGTGGCTGTCAGCTGGAGTaGGAAGAGCACTCCAACCCTCCTGCAGGCCACAGTATAGAGCAG +
Preference number: 1 (lower is better)
Translates to: FPKPSKLPRCGCQLE*EEHSNPPAGHSIEQ
Trigger: CTGCTCTATACTGTGGCCTGCAGGAGGGTTGGAGTGCTCTTCCCACTCCAGCTGACAGCCACACCGTGGCAGCTTGCTGGGCTTTGGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR CCA 90 bp TCCCTGCCTGGCCAGGCTCCTGAAGGGGGCCAAGTACTTCCAGCCTaGAGTTTGTGGGTGGAAGAAAGAAGATGGCCATGTGGGACAGGA +
Preference number: 1 (lower is better)
Translates to: SLPGQAPEGGQVLPA*SLWVEERRWPCGTG
Trigger: TCCTGTCCCACATGGCCATCTTCTTTCTTCCACCCACAAACTCCAGGCTGGAAGTACTTGGCCCCCTTCAGGAGCCTGGCCAGGCAGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR TCA 90 bp AGCCGAGCAGCCTCCGCCAGCTGTCTTTTGTGCCAGCTTGGCTGTTaGAGCCCAAGTAACTGGCAGAGACTCCTGCCATGCCATTCTCCT +
Preference number: 1 (lower is better)
Translates to: SRAASASCLLCQLGC*SPSNWQRLLPCHSP
Trigger: AGGAGAATGGCATGGCAGGAGTCTCTGCCAGTTACTTGGGCTTCAACAGCCAAGCTGGCACAAAAGACAGCTGGCGGAGGCTGCTCGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR TCA 90 bp AAGATGGCCATGTGGGACAGGAACTGCTTTACCCCCTCACTCTGCTaGGTCTGGAGGTTGGTGCTTGCTCACCACTTGGGGCAGGTCATC +
Preference number: 1 (lower is better)
Translates to: KMAMWDRNCFTPSLC*VWRLVLAHHLGQVI
Trigger: GATGACCTGCCCCAAGTGGTGAGCAAGCACCAACCTCCAGACTCAGCAGAGTGAGGGGGTAAAGCAGTTCCTGTCCCACATGGCCATCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR GCA 90 bp AGGCAGGGATGGGTCCTGAGGCAGCATTACAGTAGCCTAAGGACTTaGTGGCACTGGGCCAGTCTTGTGCTTTCCAGTCCAGAGGCTAGA +
Preference number: 1 (lower is better)
Translates to: RQGWVLRQHYSSLRT*WHWASLVLSSPEAR
Trigger: TCTAGCCTCTGGACTGGAAAGCACAAGACTGGCCCAGTGCCAGCAAGTCCTTAGGCTACTGTAATGCTGCCTCAGGACCCATCCCTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR CCA 90 bp TGGGTCCTGAGGCAGCATTACAGTAGCCTAAGGACTTGCTGGCACTaGGCCAGTCTTGTGCTTTCCAGTCCAGAGGCTAGAGCTGGGAGA +
Preference number: 1 (lower is better)
Translates to: WVLRQHYSSLRTCWH*ASLVLSSPEARAGR
Trigger: TCTCCCAGCTCTAGCCTCTGGACTGGAAAGCACAAGACTGGCCCAGTGCCAGCAAGTCCTTAGGCTACTGTAATGCTGCCTCAGGACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR CCA 90 bp CAGGGATGGGTCCTGAGGCAGCATTACAGTAGCCTAAGGACTTGCTaGCACTGGGCCAGTCTTGTGCTTTCCAGTCCAGAGGCTAGAGCT +
Preference number: 1 (lower is better)
Translates to: QGWVLRQHYSSLRTC*HWASLVLSSPEARA
Trigger: AGCTCTAGCCTCTGGACTGGAAAGCACAAGACTGGCCCAGTGCCAGCAAGTCCTTAGGCTACTGTAATGCTGCCTCAGGACCCATCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR GCA 90 bp TGTGATTGTTCCAAAGCACAGCAAACTTCCCAAAGCCCAGCAAGCTaGCACGGTGTGGCTGTCAGCTGGAGTGGGAAGAGCACTCCAACC +
Preference number: 1 (lower is better)
Translates to: CDCSKAQQTSQSPAS*HGVAVSWSGKSTPT
Trigger: GGTTGGAGTGCTCTTCCCACTCCAGCTGACAGCCACACCGTGGCAGCTTGCTGGGCTTTGGGAAGTTTGCTGTGCTTTGGAACAATCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR TCA 90 bp ACAGAGCCCCTGGCAGCCGAGAGGACGGGTATTACCATCGAGGAATaGAATCAGGCATCTCTGGGTTTCTCCCCGGAACTCTCAAGGATT +
Preference number: 1 (lower is better)
Translates to: TEPLAAERTGITIEE*NQASLGFSPELSRI
Trigger: AATCCTTGAGAGTTCCGGGGAGAAACCCAGAGATGCCTGATTTCATTCCTCGATGGTAATACCCGTCCTCTCGGCTGCCAGGGGCTCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR GCA 90 bp GGCCACAAGTTCTGTGGGTCCCAGAGGCCTGCTGCTCCAACATTGTaGCAGGAAGATTCTTCTGAACACAAGAGCTCTAAGGCTGTTCGC +
Preference number: 1 (lower is better)
Translates to: GHKFCGSQRPAAPTL*QEDSSEHKSSKAVR
Trigger: GCGAACAGCCTTAGAGCTCTTGTGTTCAGAAGAATCTTCCTGGCACAATGTTGGAGCAGCAGGCCTCTGGGACCCACAGAACTTGTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR CCA 90 bp GGCCAAGTACTTCCAGCCTGGAGTTTGTGGGTGGAAGAAAGAAGATaGCCATGTGGGACAGGAACTGCTTTACCCCCTCACTCTGCTGAG +
Preference number: 1 (lower is better)
Translates to: GQVLPAWSLWVEERR*PCGTGTALPPHSAE
Trigger: CTCAGCAGAGTGAGGGGGTAAAGCAGTTCCTGTCCCACATGGCCATCTTCTTTCTTCCACCCACAAACTCCAGGCTGGAAGTACTTGGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR TCA 90 bp TACGGATTCAGGGTCTTAGGCGGGCAGGTTTGTGGCCATTCCCTGTaGTTGTTCCAAAGCACAGCAAACTTCCCAAAGCCCAGCAAGCTG +
Preference number: 1 (lower is better)
Translates to: YGFRVLGGQVCGHSL*LFQSTANFPKPSKL
Trigger: CAGCTTGCTGGGCTTTGGGAAGTTTGCTGTGCTTTGGAACAATCACAGGGAATGGCCACAAACCTGCCCGCCTAAGACCCTGAATCCGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR CCA 90 bp CCCACAGTAGGGGCTCTACACATGATGGTTGGCTGGTTCCTAGGATaGGTGAAAGAACATAAAGGCCACAAGTTCTGTGGGTCCCAGAGG +
Preference number: 1 (lower is better)
Translates to: PTVGALHMMVGWFLG*VKEHKGHKFCGSQR
Trigger: CCTCTGGGACCCACAGAACTTGTGGCCTTTATGTTCTTTCACCCATCCTAGGAACCAGCCAACCATCATGTGTAGAGCCCCTACTGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR GCA 90 bp GCTGCTGGCCTTTCAGATAAGGCCTGGCCTAACGTCCACTTGGGTTaGAGCAAACTTGAACAAAATCCCTCTGTCCTATCCTCACCCCTT +
Preference number: 1 (lower is better)
Translates to: AAGLSDKAWPNVHLG*SKLEQNPSVLSSPL
Trigger: AAGGGGTGAGGATAGGACAGAGGGATTTTGTTCAAGTTTGCTGCAACCCAAGTGGACGTTAGGCCAGGCCTTATCTGAAAGGCCAGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR CCA 90 bp AGGTCATTCTGGAAAGTCAAGCAGGCCTTGTCACCCTGGAGTCACTaGGGAATAAATAACACTGGGGCATTTCTCTGCGGCTGCAACACC +
Preference number: 1 (lower is better)
Translates to: RSFWKVKQALSPWSH*GINNTGAFLCGCNT
Trigger: GGTGTTGCAGCCGCAGAGAAATGCCCCAGTGTTATTTATTCCCCAGTGACTCCAGGGTGACAAGGCCTGCTTGACTTTCCAGAATGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR GCA 90 bp GCAGGCCACAGTATAGAGCAGAAAGAACATTCCCACTGCCAAGGATaGTCCTTGGCAGGTTTCTCTTATGGTCTCTGCCAAAAGCACCTG +
Preference number: 1 (lower is better)
Translates to: AGHSIEQKEHSHCQG*SLAGFSYGLCQKHL
Trigger: CAGGTGCTTTTGGCAGAGACCATAAGAGAAACCTGCCAAGGAGCATCCTTGGCAGTGGGAATGTTCTTTCTGCTCTATACTGTGGCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR CCA 90 bp AAACCCTGGGGCTCCATCAACTGTCCTGTTAACTCAAGGTCATTCTaGAAAGTCAAGCAGGCCTTGTCACCCTGGAGTCACTGGGGAATA +
Preference number: 1 (lower is better)
Translates to: KPWGSINCPVNSRSF*KVKQALSPWSHWGI
Trigger: TATTCCCCAGTGACTCCAGGGTGACAAGGCCTGCTTGACTTTCCAGAATGACCTTGAGTTAACAGGACAGTTGATGGAGCCCCAGGGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR CCA 90 bp CATGTGACCCAAGTACGGATTCAGGGTCTTAGGCGGGCAGGTTTGTaGCCATTCCCTGTGATTGTTCCAAAGCACAGCAAACTTCCCAAA +
Preference number: 1 (lower is better)
Translates to: HVTQVRIQGLRRAGL*PFPVIVPKHSKLPK
Trigger: TTTGGGAAGTTTGCTGTGCTTTGGAACAATCACAGGGAATGGCCACAAACCTGCCCGCCTAAGACCCTGAATCCGTACTTGGGTCACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR GCA 90 bp TGGAGTCACTGGGGAATAAATAACACTGGGGCATTTCTCTGCGGCTaGAACACCAATACACCTCACTCCACAGCAGCACTTAGAGGTTCT +
Preference number: 1 (lower is better)
Translates to: WSHWGINNTGAFLCG*NTNTPHSTAALRGS
Trigger: AGAACCTCTAAGTGCTGCTGTGGAGTGAGGTGTATTGGTGTTGCAGCCGCAGAGAAATGCCCCAGTGTTATTTATTCCCCAGTGACTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR GCA 90 bp TCCTATCCTCACCCCTTGCCCTTTCTAGGCCAGGTAAAAAGGCTCTaGCTTGCTAATGCCCAGGAGCAGTCTAGGATTTGGGAATTTAGA +
Preference number: 1 (lower is better)
Translates to: SYPHPLPFLGQVKRL*LANAQEQSRIWEFR
Trigger: TCTAAATTCCCAAATCCTAGACTGCTCCTGGGCATTAGCAAGGCAGAGCCTTTTTACCTGGCCTAGAAAGGGCAAGGGGTGAGGATAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR CCA 90 bp GTTAACTCAAGGTCATTCTGGAAAGTCAAGCAGGCCTTGTCACCCTaGAGTCACTGGGGAATAAATAACACTGGGGCATTTCTCTGCGGC +
Preference number: 1 (lower is better)
Translates to: VNSRSFWKVKQALSP*SHWGINNTGAFLCG
Trigger: GCCGCAGAGAAATGCCCCAGTGTTATTTATTCCCCAGTGACTCCAGGGTGACAAGGCCTGCTTGACTTTCCAGAATGACCTTGAGTTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR CCA 90 bp TCCACACAATGCTGTGGTGTAATGGAACAGCTTTGGAGTCAGACCTaGCTGAAGCTCCAGGTCTGCGGCTTAAACTGGTCAAAACACTCT +
Preference number: 1 (lower is better)
Translates to: STQCCGVMEQLWSQT*LKLQVCGLNWSKHS
Trigger: AGAGTGTTTTGACCAGTTTAAGCCGCAGACCTGGAGCTTCAGCCAGGTCTGACTCCAAAGCTGTTCCATTACACCACAGCATTGTGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR CCA 90 bp AGGAGGACTTTGCCCACAGTAGGGGCTCTACACATGATGGTTGGCTaGTTCCTAGGATGGGTGAAAGAACATAAAGGCCACAAGTTCTGT +
Preference number: 1 (lower is better)
Translates to: RRTLPTVGALHMMVG*FLGWVKEHKGHKFC
Trigger: ACAGAACTTGTGGCCTTTATGTTCTTTCACCCATCCTAGGAACCAGCCAACCATCATGTGTAGAGCCCCTACTGTGGGCAAAGTCCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR TCA 90 bp CCTCATCATCCCTCGCCCTCTAGAGTTCCTTTGGAGGGTTCAGAATaGATCAAGGGTCCAGTGGAGATCCTATTTCCTTTATCATCCCCT +
Preference number: 1 (lower is better)
Translates to: PHHPSPSRVPLEGSE*IKGPVEILFPLSSP
Trigger: AGGGGATGATAAAGGAAATAGGATCTCCACTGGACCCTTGATTCATTCTGAACCCTCCAAAGGAACTCTAGAGGGCGAGGGATGATGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR CCA 90 bp CCTCCATCCCTGAGAGACCCTGGTAGTATCAAAGTCTCTAAGGTATaGTGGAAAGAGATAAGGAGTCACACTAGTAGTTGTGGGAAGCAG +
Preference number: 1 (lower is better)
Translates to: PPSLRDPGSIKVSKV*WKEIRSHTSSCGKQ
Trigger: CTGCTTCCCACAACTACTAGTGTGACTCCTTATCTCTTTCCACCATACCTTAGAGACTTTGATACTACCAGGGTCTCTCAGGGATGGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR CCA 90 bp GTCAGTCAACATGGAACCAAAGAAGGTTCTGCTTCATGTAAACCCTaGGGCTCCATCAACTGTCCTGTTAACTCAAGGTCATTCTGGAAA +
Preference number: 1 (lower is better)
Translates to: VSQHGTKEGSASCKP*GSINCPVNSRSFWK
Trigger: TTTCCAGAATGACCTTGAGTTAACAGGACAGTTGATGGAGCCCCAGGGTTTACATGAAGCAGAACCTTCTTTGGTTCCATGTTGACTGAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR CCA 90 bp CCTCTAGAGTTCCTTTGGAGGGTTCAGAATGAATCAAGGGTCCAGTaGAGATCCTATTTCCTTTATCATCCCCTCCATGTCTGGAGAATA +
Preference number: 1 (lower is better)
Translates to: PLEFLWRVQNESRVQ*RSYFLYHPLHVWRI
Trigger: TATTCTCCAGACATGGAGGGGATGATAAAGGAAATAGGATCTCCACTGGACCCTTGATTCATTCTGAACCCTCCAAAGGAACTCTAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR CCA 90 bp CCCACAAATGTCCTCGTCCCATTCTCCATGCAAGCATTGGTCCTCTaGCAAATTCACACCAACATAATTCCAAACTGCACATCTATTTCC +
Preference number: 1 (lower is better)
Translates to: PTNVLVPFSMQALVL*QIHTNIIPNCTSIS
Trigger: GGAAATAGATGTGCAGTTTGGAATTATGTTGGTGTGAATTTGCCAGAGGACCAATGCTTGCATGGAGAATGGGACGAGGACATTTGTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR GCA 90 bp ACAAACAATAGATCTGACAACAGGGACCTCGGGGTTGAAGAGTCATaGCATAAGTCAGTCAACATGGAACCAAAGAAGGTTCTGCTTCAT +
Preference number: 1 (lower is better)
Translates to: TNNRSDNRDLGVEES*HKSVNMEPKKVLLH
Trigger: ATGAAGCAGAACCTTCTTTGGTTCCATGTTGACTGACTTATGGCATGACTCTTCAACCCCGAGGTCCCTGTTGTCAGATCTATTGTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR TCA 90 bp CTTCTGGAGGTCATCCCGTCCAACCCTTCGTCCCCAGACAGAATTTaGTTAGGAATGGATGAAAAACATTTGTACTGCTTAATAAATGGA +
Preference number: 1 (lower is better)
Translates to: LLEVIPSNPSSPDRI*LGMDEKHLYCLING
Trigger: TCCATTTATTAAGCAGTACAAATGTTTTTCATCCATTCCTAATCAAATTCTGTCTGGGGACGAAGGGTTGGACGGGATGACCTCCAGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR CCA 90 bp TCCCCGGAACTCTCAAGGATTTCAGTTCCCAATTACCACTTTTATTaGTTCTCTCTAGACCTCAAATTCCACACAATGCTGTGGTGTAAT +
Preference number: 1 (lower is better)
Translates to: SPELSRISVPNYHFY*FSLDLKFHTMLWCN
Trigger: ATTACACCACAGCATTGTGTGGAATTTGAGGTCTAGAGAGAACCAATAAAAGTGGTAATTGGGAACTGAAATCCTTGAGAGTTCCGGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR GCA 90 bp GGCCGCGGGCGCGCGCGAGACTTTCCAAGTCAAGGGGTCCCCAGGGAGTCTGGAGGGCAACTTCTCCCTTaGTCGCCTGGTCCCTCCCTG +
Preference number: 2 (lower is better)
Translates to: GRGRARDFPSQGVPRESGGQLLP*SPGPSL
Trigger: CAGGGAGGGACCAGGCGAGCAAGGGAGAAGTTGCCC...TCCAGACTCCCTGGGGACCCCTTGACTTGGAAAGTCTCGCGCGCGCCCGCGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338901.4
3UTR-3UTR TCA 90 bp ACTTGCTGGCACTGGGCCAGTCTTGTGCTTTCCAGTCCAGAGGCTAGAGCTGGGGCCTGGCCAGGCTCCTaGAGGGGGCCAAGTACTTCC +
Preference number: 2 (lower is better)
Translates to: TCWHWASLVLSSPEARAGAWPGS*RGPSTS
Trigger: GGAAGTACTTGGCCCCCTTCAGGAGCCTGGCCAGGC...CCCAGCTCTAGCCTCTGGACTGGAAAGCACAAGACTGGCCCAGTGCCAGCAAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CCA 90 bp ACTTGCTGGCACTGGGCCAGTCTTGTGCTTTCCAGTCCAGAGGCTAGAGCTGGGTTGCCACAGAGCCCCTaGCAGCCGAGAGGACGGGTA +
Preference number: 2 (lower is better)
Translates to: TCWHWASLVLSSPEARAGLPQSP*QPRGRV
Trigger: TACCCGTCCTCTCGGCTGCCAGGGGCTCTGTGGCAA...CCCAGCTCTAGCCTCTGGACTGGAAAGCACAAGACTGGCCCAGTGCCAGCAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR GCA 90 bp ACTTGCTGGCACTGGGCCAGTCTTGTGCTTTCCAGTCCAGAGGCTAGAGCTGGGCAAAGCCCAGCAAGCTaGCACGGTGTGGCTGTCAGC +
Preference number: 2 (lower is better)
Translates to: TCWHWASLVLSSPEARAGQSPAS*HGVAVS
Trigger: GCTGACAGCCACACCGTGGCAGCTTGCTGGGCTTTG...CCCAGCTCTAGCCTCTGGACTGGAAAGCACAAGACTGGCCCAGTGCCAGCAAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR GCA 90 bp CAAACTTCCCAAAGCCCAGCAAGCTGCCACGGTGTGGCTGTCAGCTGGAGTGGGCCCCAGAGTCTGGAGTaGACCTTTGCTTTCTCTGGC +
Preference number: 2 (lower is better)
Translates to: QTSQSPASCHGVAVSWSGPQSLE*TFAFSG
Trigger: GCCAGAGAAAGCAAAGGTGCACTCCAGACTCTGGGG...CCCACTCCAGCTGACAGCCACACCGTGGCAGCTTGCTGGGCTTTGGGAAGTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR GCA 90 bp CTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTGGATCTAGCACCCAGAAACCAGCAAAGCCCAGCAAGCTaGCACGGTGTGGCTGTCAGC +
Preference number: 2 (lower is better)
Translates to: LYKAGLPRFGLDLAPRNQQSPAS*HGVAVS
Trigger: GCTGACAGCCACACCGTGGCAGCTTGCTGGGCTTTG...CTGGTTTCTGGGTGCTAGATCCAGCCCAAACCTGGGAAGGCCAGCCTTGTACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CCA 90 bp CTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTGGATCTAGCACCCAGAAACCAGCAAGCTGCCACGGTGTaGCTGTCAGCTGGAGTGGGA +
Preference number: 2 (lower is better)
Translates to: LYKAGLPRFGLDLAPRNQQAATV*LSAGVG
Trigger: TCCCACTCCAGCTGACAGCCACACCGTGGCAGCTTG...CTGGTTTCTGGGTGCTAGATCCAGCCCAAACCTGGGAAGGCCAGCCTTGTACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR GCA 90 bp ACTTGCTGGCACTGGGCCAGTCTTGTGCTTTCCAGTCCAGAGGCTAGAGCTGGGCAGATCCCTGCTCAGTaGCTAGACACTGGCTTCTCC +
Preference number: 2 (lower is better)
Translates to: TCWHWASLVLSSPEARAGQIPAQ*LDTGFS
Trigger: GGAGAAGCCAGTGTCTAGGCACTGAGCAGGGATCTG...CCCAGCTCTAGCCTCTGGACTGGAAAGCACAAGACTGGCCCAGTGCCAGCAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CCA 90 bp GCCCACAAATGTCCTCGTCCCATTCTCCATGCAAGCATTGGTCCTCTGGCAAATGAGCAGCAGCCCCCTTaGGGTCAGATGTCCACCCCC +
Preference number: 2 (lower is better)
Translates to: AHKCPRPILHASIGPLANEQQPP*GQMSTP
Trigger: GGGGGTGGACATCTGACCCCAAGGGGGCTGCTGCTC...ATTTGCCAGAGGACCAATGCTTGCATGGAGAATGGGACGAGGACATTTGTGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CCA 90 bp AATCAGCTTTCTTCTTTGTGCTCACAGGGCCTAGAGGAGCCTCCAGGCAGGGATTTGCCACAGAGCCCCTaGCAGCCGAGAGGACGGGTA +
Preference number: 2 (lower is better)
Translates to: NQLSSLCSQGLEEPPGRDLPQSP*QPRGRV
Trigger: TACCCGTCCTCTCGGCTGCCAGGGGCTCTGTGGCAA...ATCCCTGCCTGGAGGCTCCTCTAGGCCCTGTGAGCACAAAGAAGAAAGCTGATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CCA 90 bp ACTTGCTGGCACTGGGCCAGTCTTGTGCTTTCCAGTCCAGAGGCTAGAGCTGGGTGCTTGCTCACCACTTaGGGCAGGTCATCTTCCCTC +
Preference number: 2 (lower is better)
Translates to: TCWHWASLVLSSPEARAGCLLTT*GRSSSL
Trigger: GAGGGAAGATGACCTGCCCCAAGTGGTGAGCAAGCA...CCCAGCTCTAGCCTCTGGACTGGAAAGCACAAGACTGGCCCAGTGCCAGCAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CCA 90 bp ACTTGCTGGCACTGGGCCAGTCTTGTGCTTTCCAGTCCAGAGGCTAGAGCTGGGGCTGAGTCTGGAGGTTaGTGCTTGCTCACCACTTGG +
Preference number: 2 (lower is better)
Translates to: TCWHWASLVLSSPEARAGAESGG*CLLTTW
Trigger: CCAAGTGGTGAGCAAGCACCAACCTCCAGACTCAGC...CCCAGCTCTAGCCTCTGGACTGGAAAGCACAAGACTGGCCCAGTGCCAGCAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR TCA 90 bp GCCAGCTTGGCTGTTGAAGCCCAAGTAACTGGCAGAGACTCCTGCCATGCCATTCATGAGCACCTGCGGTaGCAATGCTCTGCTGTGGCT +
Preference number: 2 (lower is better)
Translates to: ASLAVEAQVTGRDSCHAIHEHLR*QCSAVA
Trigger: AGCCACAGCAGAGCATTGTCACCGCAGGTGCTCATG...AATGGCATGGCAGGAGTCTCTGCCAGTTACTTGGGCTTCAACAGCCAAGCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR GCA 90 bp ACTTGCTGGCACTGGGCCAGTCTTGTGCTTTCCAGTCCAGAGGCTAGAGCTGGGTCCCACTGCCAAGGATaGTCCTTGGCAGGTTTCTCT +
Preference number: 2 (lower is better)
Translates to: TCWHWASLVLSSPEARAGSHCQG*SLAGFS
Trigger: AGAGAAACCTGCCAAGGAGCATCCTTGGCAGTGGGA...CCCAGCTCTAGCCTCTGGACTGGAAAGCACAAGACTGGCCCAGTGCCAGCAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CCA 90 bp CAAACTTCCCAAAGCCCAGCAAGCTGCCACGGTGTGGCTGTCAGCTGGAGTGGGGCCAAGGATGCTCCTTaGCAGGTTTCTCTTATGGTC +
Preference number: 2 (lower is better)
Translates to: QTSQSPASCHGVAVSWSGAKDAP*QVSLMV
Trigger: GACCATAAGAGAAACCTGCCAAGGAGCATCCTTGGC...CCCACTCCAGCTGACAGCCACACCGTGGCAGCTTGCTGGGCTTTGGGAAGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CCA 90 bp GACTCTTTTTGCCACAGAGCCCCTGGCAGCCGAGAGGACGGGTATTACCATCGACAGACTGTACAAGGCTaGCCTTCCCAGGTTTGGGCT +
Preference number: 2 (lower is better)
Translates to: DSFCHRAPGSREDGYYHRQTVQG*PSQVWA
Trigger: AGCCCAAACCTGGGAAGGCCAGCCTTGTACAGTCTG...TCGATGGTAATACCCGTCCTCTCGGCTGCCAGGGGCTCTGTGGCAAAAAGAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR TCA 90 bp CCAGCTGTCTTTTGTGCCAGCTTGGCTGTTGAAGCCCAAGTAACTGGCAGAGACCATCACGTCTCACCCTaGCCCTTGAAGGGCCAAGCA +
Preference number: 2 (lower is better)
Translates to: PAVFCASLAVEAQVTGRDHHVSP*PLKGQA
Trigger: TGCTTGGCCCTTCAAGGGTCAGGGTGAGACGTGATG...GTCTCTGCCAGTTACTTGGGCTTCAACAGCCAAGCTGGCACAAAAGACAGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR TCA 90 bp ACTTGCTGGCACTGGGCCAGTCTTGTGCTTTCCAGTCCAGAGGCTAGAGCTGGGCTGGTCAAAACACTCTaGGAGTGCTACCTCTCTGAG +
Preference number: 2 (lower is better)
Translates to: TCWHWASLVLSSPEARAGLVKTL*ECYLSE
Trigger: CTCAGAGAGGTAGCACTCTCAGAGTGTTTTGACCAG...CCCAGCTCTAGCCTCTGGACTGGAAAGCACAAGACTGGCCCAGTGCCAGCAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR GCA 90 bp GCCAGCTTGGCTGTTGAAGCCCAAGTAACTGGCAGAGACTCCTGCCATGCCATTCCCCAGAGTCTGGAGTaGACCTTTGCTTTCTCTGGC +
Preference number: 2 (lower is better)
Translates to: ASLAVEAQVTGRDSCHAIPQSLE*TFAFSG
Trigger: GCCAGAGAAAGCAAAGGTGCACTCCAGACTCTGGGG...AATGGCATGGCAGGAGTCTCTGCCAGTTACTTGGGCTTCAACAGCCAAGCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR GCA 90 bp CAGACTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTGGATCTAGCACCCAGAAAAGCAGCATGAGCACCTaGGGTGACAATGCTCTGCTG +
Preference number: 2 (lower is better)
Translates to: QTVQGWPSQVWAGSSTQKSSMST*GDNALL
Trigger: CAGCAGAGCATTGTCACCGCAGGTGCTCATGCTGCT...TTTCTGGGTGCTAGATCCAGCCCAAACCTGGGAAGGCCAGCCTTGTACAGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR GCA 90 bp AATCAGCTTTCTTCTTTGTGCTCACAGGGCCTAGAGGAGCCTCCAGGCAGGGATGAGTCTGGAGGTTGGTaGTTGCTCACCACTTGGGGC +
Preference number: 2 (lower is better)
Translates to: NQLSSLCSQGLEEPPGRDESGGW*LLTTWG
Trigger: GCCCCAAGTGGTGAGCAAGCACCAACCTCCAGACTC...ATCCCTGCCTGGAGGCTCCTCTAGGCCCTGTGAGCACAAAGAAGAAAGCTGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CCA 90 bp ACTTGCTGGCACTGGGCCAGTCTTGTGCTTTCCAGTCCAGAGGCTAGAGCTGGGCAGGCCTTGTCACCCTaGAGTCACTGGGGAATAAAT +
Preference number: 2 (lower is better)
Translates to: TCWHWASLVLSSPEARAGQALSP*SHWGIN
Trigger: ATTTATTCCCCAGTGACTCCAGGGTGACAAGGCCTG...CCCAGCTCTAGCCTCTGGACTGGAAAGCACAAGACTGGCCCAGTGCCAGCAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CCA 90 bp GCTCTGCTGTGGCTTTTTGAAGCCAGAGTGAAGAAAGACTGGGTTAGTACAGCAGAGCAGCAGCCCCCTTaGGGTCAGATGTCCACCCCC +
Preference number: 2 (lower is better)
Translates to: ALLWLFEARVKKDWVSTAEQQPP*GQMSTP
Trigger: GGGGGTGGACATCTGACCCCAAGGGGGCTGCTGCTC...TGCTGTACTAACCCAGTCTTTCTTCACTCTGGCTTCAAAAAGCCACAGCAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CCA 90 bp CTGCTCCAACATTGTGCCAGGAAGATTCTTCTGAACACAAGAGCTCTAAGGCTGGAGCAGCAGCCCCCTTaGGGTCAGATGTCCACCCCC +
Preference number: 2 (lower is better)
Translates to: LLQHCARKILLNTRALRLEQQPP*GQMSTP
Trigger: GGGGGTGGACATCTGACCCCAAGGGGGCTGCTGCTC...CAGCCTTAGAGCTCTTGTGTTCAGAAGAATCTTCCTGGCACAATGTTGGAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CCA 90 bp CCAGCTGTCTTTTGTGCCAGCTTGGCTGTTGAAGCCCAAGTAACTGGCAGAGACGGCTGTCAGCTGGAGTaGGAAGAGCACTCCAACCCT +
Preference number: 2 (lower is better)
Translates to: PAVFCASLAVEAQVTGRDGCQLE*EEHSNP
Trigger: AGGGTTGGAGTGCTCTTCCCACTCCAGCTGACAGCC...GTCTCTGCCAGTTACTTGGGCTTCAACAGCCAAGCTGGCACAAAAGACAGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CCA 90 bp GACTCTTTTTGCCACAGAGCCCCTGGCAGCCGAGAGGACGGGTATTACCATCGAAGGCGGGCAGGTTTGTaGCCATTCCCTGTGATTGTT +
Preference number: 2 (lower is better)
Translates to: DSFCHRAPGSREDGYYHRRRAGL*PFPVIV
Trigger: AACAATCACAGGGAATGGCCACAAACCTGCCCGCCT...TCGATGGTAATACCCGTCCTCTCGGCTGCCAGGGGCTCTGTGGCAAAAAGAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CCA 90 bp AATCAGCTTTCTTCTTTGTGCTCACAGGGCCTAGAGGAGCCTCCAGGCAGGGATTGGCCTTCCCAGGTTTaGGCTGGATCTAGCACCCAG +
Preference number: 2 (lower is better)
Translates to: NQLSSLCSQGLEEPPGRDWPSQV*AGSSTQ
Trigger: CTGGGTGCTAGATCCAGCCCAAACCTGGGAAGGCCA...ATCCCTGCCTGGAGGCTCCTCTAGGCCCTGTGAGCACAAAGAAGAAAGCTGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CCA 90 bp GCCAGCTTGGCTGTTGAAGCCCAAGTAACTGGCAGAGACTCCTGCCATGCCATTCAGACTGTACAAGGCTaGCCTTCCCAGGTTTGGGCT +
Preference number: 2 (lower is better)
Translates to: ASLAVEAQVTGRDSCHAIQTVQG*PSQVWA
Trigger: AGCCCAAACCTGGGAAGGCCAGCCTTGTACAGTCTG...AATGGCATGGCAGGAGTCTCTGCCAGTTACTTGGGCTTCAACAGCCAAGCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CCA 90 bp AGGCAGCATTACAGTAGCCTAAGGACTTGCTGGCACTGGGCCAGTCTTGTGCTTGGCCAGACACATGCCTaGAGTTCACCTCACCTTGGG +
Preference number: 2 (lower is better)
Translates to: RQHYSSLRTCWHWASLVLGQTHA*SSPHLG
Trigger: CCCAAGGTGAGGTGAACTCCAGGCATGTGTCTGGCC...AAGCACAAGACTGGCCCAGTGCCAGCAAGTCCTTAGGCTACTGTAATGCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CCA 90 bp ACTTGCTGGCACTGGGCCAGTCTTGTGCTTTCCAGTCCAGAGGCTAGAGCTGGGCCAGCCTGGAGTTTGTaGGTGGAAGAAAGAAGATGG +
Preference number: 2 (lower is better)
Translates to: TCWHWASLVLSSPEARAGPAWSL*VEERRW
Trigger: CCATCTTCTTTCTTCCACCCACAAACTCCAGGCTGG...CCCAGCTCTAGCCTCTGGACTGGAAAGCACAAGACTGGCCCAGTGCCAGCAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR CAA 90 bp GGGGCGCTGATCCTCACTAGAACGCCGAGGACAATCAGTCTCAAATaGCAGGTAAGTGTGAACAAGCCCACGTTCTGGTCAGCGCACAAG +
Preference number: 2 (lower is better)
Translates to: GALILTRTPRTISLK*QVSVNKPTFWSAHK
Trigger: CTTGTGCGCTGACCAGAACGTGGGCTTGTTCACACTTACCTGCAATTTGAGACTGATTGTCCTCGGCGTTCTAGTGAGGATCAGCGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338901.4
3UTR-3UTR TCA 90 bp AATCAGCTTTCTTCTTTGTGCTCACAGGGCCTAGAGGAGCCTCCAGGCAGGGATTTTAGGGGAGCAGCATaGGCACCTGCGGTGACAATG +
Preference number: 2 (lower is better)
Translates to: NQLSSLCSQGLEEPPGRDFRGAA*APAVTM
Trigger: CATTGTCACCGCAGGTGCTCATGCTGCTCCCCTAAA...ATCCCTGCCTGGAGGCTCCTCTAGGCCCTGTGAGCACAAAGAAGAAAGCTGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR GCA 90 bp CAAACTTCCCAAAGCCCAGCAAGCTGCCACGGTGTGGCTGTCAGCTGGAGTGGGGGGGTTGAAGAGTCATaGCATAAGTCAGTCAACATG +
Preference number: 2 (lower is better)
Translates to: QTSQSPASCHGVAVSWSGGVEES*HKSVNM
Trigger: CATGTTGACTGACTTATGGCATGACTCTTCAACCCC...CCCACTCCAGCTGACAGCCACACCGTGGCAGCTTGCTGGGCTTTGGGAAGTTTG
54% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR GCA 90 bp TTTCAGGAACAAGAGGAGCAGACTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTCCCCAGAGTCTGGAGTaGACCTTTGCTTTCTCTGGC +
Preference number: 2 (lower is better)
Translates to: FQEQEEQTVQGWPSQVWAPQSLE*TFAFSG
Trigger: GCCAGAGAAAGCAAAGGTGCACTCCAGACTCTGGGG...AGCCCAAACCTGGGAAGGCCAGCCTTGTACAGTCTGCTCCTCTTGTTCCTGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR GCA 90 bp TTTCAGGAACAAGAGGAGCAGACTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTGCACTCCAACCCTCCTaGAGGCCACAGTATAGAGCA +
Preference number: 2 (lower is better)
Translates to: FQEQEEQTVQGWPSQVWAALQPS*RPQYRA
Trigger: TGCTCTATACTGTGGCCTGCAGGAGGGTTGGAGTGC...AGCCCAAACCTGGGAAGGCCAGCCTTGTACAGTCTGCTCCTCTTGTTCCTGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR GCA 90 bp CTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTGGATCTAGCACCCAGAAACCAGCAGGTAAAAAGGCTCTaGCTTGCTAATGCCCAGGAG +
Preference number: 2 (lower is better)
Translates to: LYKAGLPRFGLDLAPRNQQVKRL*LANAQE
Trigger: CTCCTGGGCATTAGCAAGGCAGAGCCTTTTTACCTG...CTGGTTTCTGGGTGCTAGATCCAGCCCAAACCTGGGAAGGCCAGCCTTGTACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR GCA 90 bp GCCCACAAATGTCCTCGTCCCATTCTCCATGCAAGCATTGGTCCTCTGGCAAATTGGGTCCCAGAGGCCTaGTGCTCCAACATTGTGCCA +
Preference number: 2 (lower is better)
Translates to: AHKCPRPILHASIGPLANWVPEA*CSNIVP
Trigger: TGGCACAATGTTGGAGCAGCAGGCCTCTGGGACCCA...ATTTGCCAGAGGACCAATGCTTGCATGGAGAATGGGACGAGGACATTTGTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CCA 90 bp TCCTCAGGGGCGCTGATCCTCACTAGAACGCCGAGGACAATCAGTCTCAAATTGGAAGACAACCTGCCCTaGGCAACTTCTCCCTTGCTC +
Preference number: 2 (lower is better)
Translates to: SSGALILTRTPRTISLKLEDNLP*ATSPLL
Trigger: GAGCAAGGGAGAAGTTGCCCAGGGCAGGTTGTCTTC...CAATTTGAGACTGATTGTCCTCGGCGTTCTAGTGAGGATCAGCGCCCCTGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338901.4
3UTR-3UTR CCA 90 bp CTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTGGATCTAGCACCCAGAAACCAGTCTGGCCTGCTGCCCTaGATCCTCATTTTAGTGCAA +
Preference number: 2 (lower is better)
Translates to: LYKAGLPRFGLDLAPRNQSGLLP*ILILVQ
Trigger: TTGCACTAAAATGAGGATCCAGGGCAGCAGGCCAGA...CTGGTTTCTGGGTGCTAGATCCAGCCCAAACCTGGGAAGGCCAGCCTTGTACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CCA 90 bp GCATCTCTGGGTTTCTCCCCGGAACTCTCAAGGATTTCAGTTCCCAATTACCACCAAGCTGCCACGGTGTaGCTGTCAGCTGGAGTGGGA +
Preference number: 2 (lower is better)
Translates to: ASLGFSPELSRISVPNYHQAATV*LSAGVG
Trigger: TCCCACTCCAGCTGACAGCCACACCGTGGCAGCTTG...GTGGTAATTGGGAACTGAAATCCTTGAGAGTTCCGGGGAGAAACCCAGAGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CCA 90 bp CCAGCTGTCTTTTGTGCCAGCTTGGCTGTTGAAGCCCAAGTAACTGGCAGAGACCAGACTGTACAAGGCTaGCCTTCCCAGGTTTGGGCT +
Preference number: 2 (lower is better)
Translates to: PAVFCASLAVEAQVTGRDQTVQG*PSQVWA
Trigger: AGCCCAAACCTGGGAAGGCCAGCCTTGTACAGTCTG...GTCTCTGCCAGTTACTTGGGCTTCAACAGCCAAGCTGGCACAAAAGACAGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR TCA 90 bp TTTCAGGAACAAGAGGAGCAGACTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTGAGGGTCCTACCATATaGTCTGTTGGGAAGCTTGGG +
Preference number: 2 (lower is better)
Translates to: FQEQEEQTVQGWPSQVWAEGPTI*SVGKLG
Trigger: CCCAAGCTTCCCAACAGATCATATGGTAGGACCCTC...AGCCCAAACCTGGGAAGGCCAGCCTTGTACAGTCTGCTCCTCTTGTTCCTGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR TCA 90 bp GCATCTCTGGGTTTCTCCCCGGAACTCTCAAGGATTTCAGTTCCCAATTACCACCATCACGTCTCACCCTaGCCCTTGAAGGGCCAAGCA +
Preference number: 2 (lower is better)
Translates to: ASLGFSPELSRISVPNYHHHVSP*PLKGQA
Trigger: TGCTTGGCCCTTCAAGGGTCAGGGTGAGACGTGATG...GTGGTAATTGGGAACTGAAATCCTTGAGAGTTCCGGGGAGAAACCCAGAGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR GCA 90 bp CAGACTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTGGATCTAGCACCCAGAAATTGCTTTCTCTGGCCTaGTGCCCTGGATCCTCATTT +
Preference number: 2 (lower is better)
Translates to: QTVQGWPSQVWAGSSTQKLLSLA*CPGSSF
Trigger: AAATGAGGATCCAGGGCAGCAGGCCAGAGAAAGCAA...TTTCTGGGTGCTAGATCCAGCCCAAACCTGGGAAGGCCAGCCTTGTACAGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR GCA 90 bp CCAGCTGTCTTTTGTGCCAGCTTGGCTGTTGAAGCCCAAGTAACTGGCAGAGACTCCCACTGCCAAGGATaGTCCTTGGCAGGTTTCTCT +
Preference number: 2 (lower is better)
Translates to: PAVFCASLAVEAQVTGRDSHCQG*SLAGFS
Trigger: AGAGAAACCTGCCAAGGAGCATCCTTGGCAGTGGGA...GTCTCTGCCAGTTACTTGGGCTTCAACAGCCAAGCTGGCACAAAAGACAGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR GCA 90 bp AACATAAAGGCCACAAGTTCTGTGGGTCCCAGAGGCCTGCTGCTCCAACATTGTGCACTCCAACCCTCCTaGAGGCCACAGTATAGAGCA +
Preference number: 2 (lower is better)
Translates to: NIKATSSVGPRGLLLQHCALQPS*RPQYRA
Trigger: TGCTCTATACTGTGGCCTGCAGGAGGGTTGGAGTGC...ACAATGTTGGAGCAGCAGGCCTCTGGGACCCACAGAACTTGTGGCCTTTATGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR GCA 90 bp AGGCAGCATTACAGTAGCCTAAGGACTTGCTGGCACTGGGCCAGTCTTGTGCTTTTAGGGCCAGACACATaGCTGGAGTTCACCTCACCT +
Preference number: 2 (lower is better)
Translates to: RQHYSSLRTCWHWASLVLLGPDT*LEFTSP
Trigger: AGGTGAGGTGAACTCCAGGCATGTGTCTGGCCCTAA...AAGCACAAGACTGGCCCAGTGCCAGCAAGTCCTTAGGCTACTGTAATGCTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR GCA 90 bp CCAGCTGTCTTTTGTGCCAGCTTGGCTGTTGAAGCCCAAGTAACTGGCAGAGACCCTCTGTCATCTGCTTaGCCACAAATGTCCTCGTCC +
Preference number: 2 (lower is better)
Translates to: PAVFCASLAVEAQVTGRDPLSSA*PQMSSS
Trigger: GGACGAGGACATTTGTGGGCAAGCAGATGACAGAGG...GTCTCTGCCAGTTACTTGGGCTTCAACAGCCAAGCTGGCACAAAAGACAGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR GCA 90 bp AATCAGCTTTCTTCTTTGTGCTCACAGGGCCTAGAGGAGCCTCCAGGCAGGGATACTGGGCCAGTCTTGTaGTTTCCAGTCCAGAGGCTA +
Preference number: 2 (lower is better)
Translates to: NQLSSLCSQGLEEPPGRDTGPVL*FPVQRL
Trigger: TAGCCTCTGGACTGGAAAGCACAAGACTGGCCCAGT...ATCCCTGCCTGGAGGCTCCTCTAGGCCCTGTGAGCACAAAGAAGAAAGCTGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CCA 90 bp CAGACTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTGGATCTAGCACCCAGAAAGCTTCATGTAAACCCTaGGGCTCCATCAACTGTCCT +
Preference number: 2 (lower is better)
Translates to: QTVQGWPSQVWAGSSTQKASCKP*GSINCP
Trigger: AGGACAGTTGATGGAGCCCCAGGGTTTACATGAAGC...TTTCTGGGTGCTAGATCCAGCCCAAACCTGGGAAGGCCAGCCTTGTACAGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CCA 90 bp GCCAGCTTGGCTGTTGAAGCCCAAGTAACTGGCAGAGACTCCTGCCATGCCATTGCCAAGGATGCTCCTTaGCAGGTTTCTCTTATGGTC +
Preference number: 2 (lower is better)
Translates to: ASLAVEAQVTGRDSCHAIAKDAP*QVSLMV
Trigger: GACCATAAGAGAAACCTGCCAAGGAGCATCCTTGGC...AATGGCATGGCAGGAGTCTCTGCCAGTTACTTGGGCTTCAACAGCCAAGCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CCA 90 bp AAGCTAAAGAATATCCCAGACTCACATGACCACAGGTCCCAGGTTAGGCACCTGGGCTGTCAGCTGGAGTaGGAAGAGCACTCCAACCCT +
Preference number: 2 (lower is better)
Translates to: KLKNIPDSHDHRSQVRHLGCQLE*EEHSNP
Trigger: AGGGTTGGAGTGCTCTTCCCACTCCAGCTGACAGCC...CAGGTGCCTAACCTGGGACCTGTGGTCATGTGAGTCTGGGATATTCTTTAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CCA 90 bp CCAGCTGTCTTTTGTGCCAGCTTGGCTGTTGAAGCCCAAGTAACTGGCAGAGACAGGCGGGCAGGTTTGTaGCCATTCCCTGTGATTGTT +
Preference number: 2 (lower is better)
Translates to: PAVFCASLAVEAQVTGRDRRAGL*PFPVIV
Trigger: AACAATCACAGGGAATGGCCACAAACCTGCCCGCCT...GTCTCTGCCAGTTACTTGGGCTTCAACAGCCAAGCTGGCACAAAAGACAGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CCA 90 bp GCATCTCTGGGTTTCTCCCCGGAACTCTCAAGGATTTCAGTTCCCAATTACCACTGGCCTTCCCAGGTTTaGGCTGGATCTAGCACCCAG +
Preference number: 2 (lower is better)
Translates to: ASLGFSPELSRISVPNYHWPSQV*AGSSTQ
Trigger: CTGGGTGCTAGATCCAGCCCAAACCTGGGAAGGCCA...GTGGTAATTGGGAACTGAAATCCTTGAGAGTTCCGGGGAGAAACCCAGAGATGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR CAA 90 bp AGTCATGTGACCCAAGTACGGATTCAGGGTCTTAGGCGGGCAGGTTaGTGGCCATTCCCTGTGATTGTTCCAAAGCACAGCAAACTTCCC +
Preference number: 2 (lower is better)
Translates to: SHVTQVRIQGLRRAG*WPFPVIVPKHSKLP
Trigger: GGGAAGTTTGCTGTGCTTTGGAACAATCACAGGGAATGGCCACAAACCTGCCCGCCTAAGACCCTGAATCCGTACTTGGGTCACATGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR TCA 90 bp GGGTCCTACCATATGATCTGTTGGGAAGCTTGGGGTTTAGGGGAAGGTGAATTTCATGAGCACCTGCGGTaGCAATGCTCTGCTGTGGCT +
Preference number: 2 (lower is better)
Translates to: GSYHMICWEAWGLGEGEFHEHLR*QCSAVA
Trigger: AGCCACAGCAGAGCATTGTCACCGCAGGTGCTCATG...AAATTCACCTTCCCCTAAACCCCAAGCTTCCCAACAGATCATATGGTAGGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR TCA 90 bp AGGCAGCATTACAGTAGCCTAAGGACTTGCTGGCACTGGGCCAGTCTTGTGCTTAAGGGAAGGCACAGCTaGGAAATAAGTACCCGCTGT +
Preference number: 2 (lower is better)
Translates to: RQHYSSLRTCWHWASLVLKGRHS*EISTRC
Trigger: ACAGCGGGTACTTATTTCTCAGCTGTGCCTTCCCTT...AAGCACAAGACTGGCCCAGTGCCAGCAAGTCCTTAGGCTACTGTAATGCTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR GCA 90 bp TTTCAGGAACAAGAGGAGCAGACTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTGCATTTCTCTGCGGCTaGAACACCAATACACCTCAC +
Preference number: 2 (lower is better)
Translates to: FQEQEEQTVQGWPSQVWAAFLCG*NTNTPH
Trigger: GTGAGGTGTATTGGTGTTGCAGCCGCAGAGAAATGC...AGCCCAAACCTGGGAAGGCCAGCCTTGTACAGTCTGCTCCTCTTGTTCCTGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR GCA 90 bp TTTCAGGAACAAGAGGAGCAGACTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTACTGGGGCATTTCTCTaGGGCTGCAACACCAATACA +
Preference number: 2 (lower is better)
Translates to: FQEQEEQTVQGWPSQVWATGAFL*GCNTNT
Trigger: TGTATTGGTGTTGCAGCCGCAGAGAAATGCCCCAGT...AGCCCAAACCTGGGAAGGCCAGCCTTGTACAGTCTGCTCCTCTTGTTCCTGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR GCA 90 bp CCAGCTGTCTTTTGTGCCAGCTTGGCTGTTGAAGCCCAAGTAACTGGCAGAGACACTGGGGCATTTCTCTaGGGCTGCAACACCAATACA +
Preference number: 2 (lower is better)
Translates to: PAVFCASLAVEAQVTGRDTGAFL*GCNTNT
Trigger: TGTATTGGTGTTGCAGCCGCAGAGAAATGCCCCAGT...GTCTCTGCCAGTTACTTGGGCTTCAACAGCCAAGCTGGCACAAAAGACAGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR GCA 90 bp GCCCACAAATGTCCTCGTCCCATTCTCCATGCAAGCATTGGTCCTCTGGCAAATTCCCCAGCTACCTATTaGTTCCCTCATCATCCCTCG +
Preference number: 2 (lower is better)
Translates to: AHKCPRPILHASIGPLANSPATY*FPHHPS
Trigger: CGAGGGATGATGAGGGAAGCAATAGGTAGCTGGGGA...ATTTGCCAGAGGACCAATGCTTGCATGGAGAATGGGACGAGGACATTTGTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CCA 90 bp GCCAGCTTGGCTGTTGAAGCCCAAGTAACTGGCAGAGACTCCTGCCATGCCATTTCACCCTGGAGTCACTaGGGAATAAATAACACTGGG +
Preference number: 2 (lower is better)
Translates to: ASLAVEAQVTGRDSCHAISPWSH*GINNTG
Trigger: CCCAGTGTTATTTATTCCCCAGTGACTCCAGGGTGA...AATGGCATGGCAGGAGTCTCTGCCAGTTACTTGGGCTTCAACAGCCAAGCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CCA 90 bp GGGACTTCTGGAGGTCATCCCGTCCAACCCTTCGTCCCCAGACAGAATTTGATTCAGGCCTTGTCACCCTaGAGTCACTGGGGAATAAAT +
Preference number: 2 (lower is better)
Translates to: GTSGGHPVQPFVPRQNLIQALSP*SHWGIN
Trigger: ATTTATTCCCCAGTGACTCCAGGGTGACAAGGCCTG...AATCAAATTCTGTCTGGGGACGAAGGGTTGGACGGGATGACCTCCAGAAGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CCA 90 bp AATCAGCTTTCTTCTTTGTGCTCACAGGGCCTAGAGGAGCCTCCAGGCAGGGATGCTTCATGTAAACCCTaGGGCTCCATCAACTGTCCT +
Preference number: 2 (lower is better)
Translates to: NQLSSLCSQGLEEPPGRDASCKP*GSINCP
Trigger: AGGACAGTTGATGGAGCCCCAGGGTTTACATGAAGC...ATCCCTGCCTGGAGGCTCCTCTAGGCCCTGTGAGCACAAAGAAGAAAGCTGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CCA 90 bp AATCAGCTTTCTTCTTTGTGCTCACAGGGCCTAGAGGAGCCTCCAGGCAGGGATTCTGGCCTGCTGCCCTaGATCCTCATTTTAGTGCAA +
Preference number: 2 (lower is better)
Translates to: NQLSSLCSQGLEEPPGRDSGLLP*ILILVQ
Trigger: TTGCACTAAAATGAGGATCCAGGGCAGCAGGCCAGA...ATCCCTGCCTGGAGGCTCCTCTAGGCCCTGTGAGCACAAAGAAGAAAGCTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CCA 90 bp GGGACTTCTGGAGGTCATCCCGTCCAACCCTTCGTCCCCAGACAGAATTTGATTGCCAAGGATGCTCCTTaGCAGGTTTCTCTTATGGTC +
Preference number: 2 (lower is better)
Translates to: GTSGGHPVQPFVPRQNLIAKDAP*QVSLMV
Trigger: GACCATAAGAGAAACCTGCCAAGGAGCATCCTTGGC...AATCAAATTCTGTCTGGGGACGAAGGGTTGGACGGGATGACCTCCAGAAGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CCA 90 bp AATCAGCTTTCTTCTTTGTGCTCACAGGGCCTAGAGGAGCCTCCAGGCAGGGATGGCCTAACGTCCACTTaGGTTGCAGCAAACTTGAAC +
Preference number: 2 (lower is better)
Translates to: NQLSSLCSQGLEEPPGRDGLTST*VAANLN
Trigger: GTTCAAGTTTGCTGCAACCCAAGTGGACGTTAGGCC...ATCCCTGCCTGGAGGCTCCTCTAGGCCCTGTGAGCACAAAGAAGAAAGCTGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CCA 90 bp AGGCAGCATTACAGTAGCCTAAGGACTTGCTGGCACTGGGCCAGTCTTGTGCTTCTTTCAGATAAGGCCTaGCCTAACGTCCACTTGGGT +
Preference number: 2 (lower is better)
Translates to: RQHYSSLRTCWHWASLVLLSDKA*PNVHLG
Trigger: ACCCAAGTGGACGTTAGGCCAGGCCTTATCTGAAAG...AAGCACAAGACTGGCCCAGTGCCAGCAAGTCCTTAGGCTACTGTAATGCTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CCA 90 bp GCATCTCTGGGTTTCTCCCCGGAACTCTCAAGGATTTCAGTTCCCAATTACCACTCAGTGCCTAGACACTaGCTTCTCCTGAGCCTGGCT +
Preference number: 2 (lower is better)
Translates to: ASLGFSPELSRISVPNYHSVPRH*LLLSLA
Trigger: AGCCAGGCTCAGGAGAAGCCAGTGTCTAGGCACTGA...GTGGTAATTGGGAACTGAAATCCTTGAGAGTTCCGGGGAGAAACCCAGAGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CCA 90 bp CTGCTCCAACATTGTGCCAGGAAGATTCTTCTGAACACAAGAGCTCTAAGGCTGGGCCAGACACATGCCTaGAGTTCACCTCACCTTGGG +
Preference number: 2 (lower is better)
Translates to: LLQHCARKILLNTRALRLGQTHA*SSPHLG
Trigger: CCCAAGGTGAGGTGAACTCCAGGCATGTGTCTGGCC...CAGCCTTAGAGCTCTTGTGTTCAGAAGAATCTTCCTGGCACAATGTTGGAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CCA 90 bp GCCAGCTTGGCTGTTGAAGCCCAAGTAACTGGCAGAGACTCCTGCCATGCCATTGTAATGGAACAGCTTTaGAGTCAGACCTGGCTGAAG +
Preference number: 2 (lower is better)
Translates to: ASLAVEAQVTGRDSCHAIVMEQL*SQTWLK
Trigger: CTTCAGCCAGGTCTGACTCCAAAGCTGTTCCATTAC...AATGGCATGGCAGGAGTCTCTGCCAGTTACTTGGGCTTCAACAGCCAAGCTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR CAA 90 bp AAAGGCCACAAGTTCTGTGGGTCCCAGAGGCCTGCTGCTCCAACATaGTGCCAGGAAGATTCTTCTGAACACAAGAGCTCTAAGGCTGTT +
Preference number: 2 (lower is better)
Translates to: KGHKFCGSQRPAAPT*CQEDSSEHKSSKAV
Trigger: AACAGCCTTAGAGCTCTTGTGTTCAGAAGAATCTTCCTGGCACAATGTTGGAGCAGCAGGCCTCTGGGACCCACAGAACTTGTGGCCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR CAA 90 bp AGAGACTCCTGCCATGCCATTCTCCTTCAAACCTCTGTCATCTGCTaGCCCACAAATGTCCTCGTCCCATTCTCCATGCAAGCATTGGTC +
Preference number: 2 (lower is better)
Translates to: RDSCHAILLQTSVIC*PTNVLVPFSMQALV
Trigger: GACCAATGCTTGCATGGAGAATGGGACGAGGACATTTGTGGGCAAGCAGATGACAGAGGTTTGAAGGAGAATGGCATGGCAGGAGTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR GCA 90 bp AACATAAAGGCCACAAGTTCTGTGGGTCCCAGAGGCCTGCTGCTCCAACATTGTGCATTTCTCTGCGGCTaGAACACCAATACACCTCAC +
Preference number: 2 (lower is better)
Translates to: NIKATSSVGPRGLLLQHCAFLCG*NTNTPH
Trigger: GTGAGGTGTATTGGTGTTGCAGCCGCAGAGAAATGC...ACAATGTTGGAGCAGCAGGCCTCTGGGACCCACAGAACTTGTGGCCTTTATGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR GCA 90 bp GCCCACAAATGTCCTCGTCCCATTCTCCATGCAAGCATTGGTCCTCTGGCAAATGCGGTGACAATGCTCTaGTGTGGCTTTTTGAAGCCA +
Preference number: 2 (lower is better)
Translates to: AHKCPRPILHASIGPLANAVTML*CGFLKP
Trigger: TGGCTTCAAAAAGCCACAGCAGAGCATTGTCACCGC...ATTTGCCAGAGGACCAATGCTTGCATGGAGAATGGGACGAGGACATTTGTGGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR GCA 90 bp CCAGCTGTCTTTTGTGCCAGCTTGGCTGTTGAAGCCCAAGTAACTGGCAGAGACCAAACCTCTGTCATCTaGTTGCCCACAAATGTCCTC +
Preference number: 2 (lower is better)
Translates to: PAVFCASLAVEAQVTGRDQTSVI*LPTNVL
Trigger: GAGGACATTTGTGGGCAAGCAGATGACAGAGGTTTG...GTCTCTGCCAGTTACTTGGGCTTCAACAGCCAAGCTGGCACAAAAGACAGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CCA 90 bp GCCCACAAATGTCCTCGTCCCATTCTCCATGCAAGCATTGGTCCTCTGGCAAATTCTGGCCTGCTGCCCTaGATCCTCATTTTAGTGCAA +
Preference number: 2 (lower is better)
Translates to: AHKCPRPILHASIGPLANSGLLP*ILILVQ
Trigger: TTGCACTAAAATGAGGATCCAGGGCAGCAGGCCAGA...ATTTGCCAGAGGACCAATGCTTGCATGGAGAATGGGACGAGGACATTTGTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CCA 90 bp GCCCACAAATGTCCTCGTCCCATTCTCCATGCAAGCATTGGTCCTCTGGCAAATCTTTCAGATAAGGCCTaGCCTAACGTCCACTTGGGT +
Preference number: 2 (lower is better)
Translates to: AHKCPRPILHASIGPLANLSDKA*PNVHLG
Trigger: ACCCAAGTGGACGTTAGGCCAGGCCTTATCTGAAAG...ATTTGCCAGAGGACCAATGCTTGCATGGAGAATGGGACGAGGACATTTGTGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CCA 90 bp CTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTGGATCTAGCACCCAGAAACCAGAGAGTGAAGAAAGACTaGGTTAGTACAGCATCAGCT +
Preference number: 2 (lower is better)
Translates to: LYKAGLPRFGLDLAPRNQRVKKD*VSTASA
Trigger: AGCTGATGCTGTACTAACCCAGTCTTTCTTCACTCT...CTGGTTTCTGGGTGCTAGATCCAGCCCAAACCTGGGAAGGCCAGCCTTGTACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CCA 90 bp AGGCAGCATTACAGTAGCCTAAGGACTTGCTGGCACTGGGCCAGTCTTGTGCTTGAGTTCACCTCACCTTaGGTTGCAAGGCTGTCATTA +
Preference number: 2 (lower is better)
Translates to: RQHYSSLRTCWHWASLVLEFTSP*VARLSL
Trigger: TAATGACAGCCTTGCAACCCAAGGTGAGGTGAACTC...AAGCACAAGACTGGCCCAGTGCCAGCAAGTCCTTAGGCTACTGTAATGCTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CCA 90 bp GCCAGCTTGGCTGTTGAAGCCCAAGTAACTGGCAGAGACTCCTGCCATGCCATTGTCTGCGGCTTAAACTaGTCAAAACACTCTGAGAGT +
Preference number: 2 (lower is better)
Translates to: ASLAVEAQVTGRDSCHAIVCGLN*SKHSES
Trigger: ACTCTCAGAGTGTTTTGACCAGTTTAAGCCGCAGAC...AATGGCATGGCAGGAGTCTCTGCCAGTTACTTGGGCTTCAACAGCCAAGCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CCA 90 bp CCAGCTGTCTTTTGTGCCAGCTTGGCTGTTGAAGCCCAAGTAACTGGCAGAGACCACATGATGGTTGGCTaGTTCCTAGGATGGGTGAAA +
Preference number: 2 (lower is better)
Translates to: PAVFCASLAVEAQVTGRDHMMVG*FLGWVK
Trigger: TTTCACCCATCCTAGGAACCAGCCAACCATCATGTG...GTCTCTGCCAGTTACTTGGGCTTCAACAGCCAAGCTGGCACAAAAGACAGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CCA 90 bp AATCAGCTTTCTTCTTTGTGCTCACAGGGCCTAGAGGAGCCTCCAGGCAGGGATCACATGATGGTTGGCTaGTTCCTAGGATGGGTGAAA +
Preference number: 2 (lower is better)
Translates to: NQLSSLCSQGLEEPPGRDHMMVG*FLGWVK
Trigger: TTTCACCCATCCTAGGAACCAGCCAACCATCATGTG...ATCCCTGCCTGGAGGCTCCTCTAGGCCCTGTGAGCACAAAGAAGAAAGCTGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CCA 90 bp CCAGCTGTCTTTTGTGCCAGCTTGGCTGTTGAAGCCCAAGTAACTGGCAGAGACTCTACACATGATGGTTaGCTGGTTCCTAGGATGGGT +
Preference number: 2 (lower is better)
Translates to: PAVFCASLAVEAQVTGRDSTHDG*LVPRMG
Trigger: ACCCATCCTAGGAACCAGCCAACCATCATGTGTAGA...GTCTCTGCCAGTTACTTGGGCTTCAACAGCCAAGCTGGCACAAAAGACAGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CCA 90 bp AATCAGCTTTCTTCTTTGTGCTCACAGGGCCTAGAGGAGCCTCCAGGCAGGGATTCTACACATGATGGTTaGCTGGTTCCTAGGATGGGT +
Preference number: 2 (lower is better)
Translates to: NQLSSLCSQGLEEPPGRDSTHDG*LVPRMG
Trigger: ACCCATCCTAGGAACCAGCCAACCATCATGTGTAGA...ATCCCTGCCTGGAGGCTCCTCTAGGCCCTGTGAGCACAAAGAAGAAAGCTGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CCA 90 bp GCCAGCTTGGCTGTTGAAGCCCAAGTAACTGGCAGAGACTCCTGCCATGCCATTCATCCCCTCCATGTCTaGAGAATAGAATGGTATCAG +
Preference number: 2 (lower is better)
Translates to: ASLAVEAQVTGRDSCHAIHPLHV*RIEWYQ
Trigger: CTGATACCATTCTATTCTCCAGACATGGAGGGGATG...AATGGCATGGCAGGAGTCTCTGCCAGTTACTTGGGCTTCAACAGCCAAGCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CCA 90 bp AGGCAGCATTACAGTAGCCTAAGGACTTGCTGGCACTGGGCCAGTCTTGTGCTTCAAGTACTTCCAGCCTaGAGTTTGTGGGTGGAAGAA +
Preference number: 2 (lower is better)
Translates to: RQHYSSLRTCWHWASLVLQVLPA*SLWVEE
Trigger: TTCTTCCACCCACAAACTCCAGGCTGGAAGTACTTG...AAGCACAAGACTGGCCCAGTGCCAGCAAGTCCTTAGGCTACTGTAATGCTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR CAA 90 bp CTAGACCTCAAATTCCACACAATGCTGTGGTGTAATGGAACAGCTTaGGAGTCAGACCTGGCTGAAGCTCCAGGTCTGCGGCTTAAACTG +
Preference number: 2 (lower is better)
Translates to: LDLKFHTMLWCNGTA*ESDLAEAPGLRLKL
Trigger: CAGTTTAAGCCGCAGACCTGGAGCTTCAGCCAGGTCTGACTCCAAAGCTGTTCCATTACACCACAGCATTGTGTGGAATTTGAGGTCTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR TCA 90 bp ACTTGCTGGCACTGGGCCAGTCTTGTGCTTTCCAGTCCAGAGGCTAGAGCTGGGATTATTTTCCAAACATaGAGGAGTGGTTCTTGTTGG +
Preference number: 2 (lower is better)
Translates to: TCWHWASLVLSSPEARAGIIFQT*RSGSCW
Trigger: CCAACAAGAACCACTCCTTCATGTTTGGAAAATAAT...CCCAGCTCTAGCCTCTGGACTGGAAAGCACAAGACTGGCCCAGTGCCAGCAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR TCA 90 bp CCAGCTGTCTTTTGTGCCAGCTTGGCTGTTGAAGCCCAAGTAACTGGCAGAGACATTACCATCGAGGAATaGAATCAGGCATCTCTGGGT +
Preference number: 2 (lower is better)
Translates to: PAVFCASLAVEAQVTGRDITIEE*NQASLG
Trigger: ACCCAGAGATGCCTGATTTCATTCCTCGATGGTAAT...GTCTCTGCCAGTTACTTGGGCTTCAACAGCCAAGCTGGCACAAAAGACAGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR GCA 90 bp CTGAAAATGCGGTTAAAAGTTGTTTCAACGGGCGGGCGTGGAACAGTTATTACAGTCCCTCCCTGGTCCTaGCCTCTAAATTGGCTCGAG +
Preference number: 2 (lower is better)
Translates to: LKMRLKVVSTGGRGTVITVPPWS*PLNWLE
Trigger: CTCGAGCCAATTTAGAGGGCAGGACCAGGGAGGGAC...TGTAATAACTGTTCCACGCCCGCCCGTTGAAACAACTTTTAACCGCATTTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338901.4
3UTR-3UTR GCA 90 bp GCCAGCTTGGCTGTTGAAGCCCAAGTAACTGGCAGAGACTCCTGCCATGCCATTTTCTCTTATGGTCTCTaGCAAAAGCACCTGCCTTTT +
Preference number: 2 (lower is better)
Translates to: ASLAVEAQVTGRDSCHAIFSYGL*QKHLPF
Trigger: AAAAGGCAGGTGCTTTTGGCAGAGACCATAAGAGAA...AATGGCATGGCAGGAGTCTCTGCCAGTTACTTGGGCTTCAACAGCCAAGCTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR GCA 90 bp CTGCTCCAACATTGTGCCAGGAAGATTCTTCTGAACACAAGAGCTCTAAGGCTGTCCCACTGCCAAGGATaGTCCTTGGCAGGTTTCTCT +
Preference number: 2 (lower is better)
Translates to: LLQHCARKILLNTRALRLSHCQG*SLAGFS
Trigger: AGAGAAACCTGCCAAGGAGCATCCTTGGCAGTGGGA...CAGCCTTAGAGCTCTTGTGTTCAGAAGAATCTTCCTGGCACAATGTTGGAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR GCA 90 bp CTGCTCCAACATTGTGCCAGGAAGATTCTTCTGAACACAAGAGCTCTAAGGCTGATGTCTGACTCTTTTTaGCACAGAGCCCCTGGCAGC +
Preference number: 2 (lower is better)
Translates to: LLQHCARKILLNTRALRLMSDSF*HRAPGS
Trigger: GCTGCCAGGGGCTCTGTGGCAAAAAGAGTCAGACAT...CAGCCTTAGAGCTCTTGTGTTCAGAAGAATCTTCCTGGCACAATGTTGGAGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR GCA 90 bp CCAGCTGTCTTTTGTGCCAGCTTGGCTGTTGAAGCCCAAGTAACTGGCAGAGACGCTGCTCCAACATTGTaGCAGGAAGATTCTTCTGAA +
Preference number: 2 (lower is better)
Translates to: PAVFCASLAVEAQVTGRDAAPTL*QEDSSE
Trigger: TTCAGAAGAATCTTCCTGGCACAATGTTGGAGCAGC...GTCTCTGCCAGTTACTTGGGCTTCAACAGCCAAGCTGGCACAAAAGACAGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CCA 90 bp AACAGGGACCTCGGGGTTGAAGAGTCATGCCATAAGTCAGTCAACATGGAACCACAGGCCTTGTCACCCTaGAGTCACTGGGGAATAAAT +
Preference number: 2 (lower is better)
Translates to: NRDLGVEESCHKSVNMEPQALSP*SHWGIN
Trigger: ATTTATTCCCCAGTGACTCCAGGGTGACAAGGCCTG...TGGTTCCATGTTGACTGACTTATGGCATGACTCTTCAACCCCGAGGTCCCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CCA 90 bp AATCAGCTTTCTTCTTTGTGCTCACAGGGCCTAGAGGAGCCTCCAGGCAGGGATTACCATATGATCTGTTaGGAAGCTTGGGGTTTAGGG +
Preference number: 2 (lower is better)
Translates to: NQLSSLCSQGLEEPPGRDYHMIC*EAWGLG
Trigger: CCCTAAACCCCAAGCTTCCCAACAGATCATATGGTA...ATCCCTGCCTGGAGGCTCCTCTAGGCCCTGTGAGCACAAAGAAGAAAGCTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CCA 90 bp AACATAAAGGCCACAAGTTCTGTGGGTCCCAGAGGCCTGCTGCTCCAACATTGTAGGAGTGGTTCTTGTTaGTTTCTGCTACAACTGCGG +
Preference number: 2 (lower is better)
Translates to: NIKATSSVGPRGLLLQHCRSGSC*FLLQLR
Trigger: CCGCAGTTGTAGCAGAAACCAACAAGAACCACTCCT...ACAATGTTGGAGCAGCAGGCCTCTGGGACCCACAGAACTTGTGGCCTTTATGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CCA 90 bp AACATAAAGGCCACAAGTTCTGTGGGTCCCAGAGGCCTGCTGCTCCAACATTGTGTAATGGAACAGCTTTaGAGTCAGACCTGGCTGAAG +
Preference number: 2 (lower is better)
Translates to: NIKATSSVGPRGLLLQHCVMEQL*SQTWLK
Trigger: CTTCAGCCAGGTCTGACTCCAAAGCTGTTCCATTAC...ACAATGTTGGAGCAGCAGGCCTCTGGGACCCACAGAACTTGTGGCCTTTATGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR CAA 90 bp TTTCAGATAAGGCCTGGCCTAACGTCCACTTGGGTTGCAGCAAACTaGAACAAAATCCCTCTGTCCTATCCTCACCCCTTGCCCTTTCTA +
Preference number: 2 (lower is better)
Translates to: FQIRPGLTSTWVAAN*NKIPLSYPHPLPFL
Trigger: TAGAAAGGGCAAGGGGTGAGGATAGGACAGAGGGATTTTGTTCAAGTTTGCTGCAACCCAAGTGGACGTTAGGCCAGGCCTTATCTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR TCA 90 bp GGGTCCTACCATATGATCTGTTGGGAAGCTTGGGGTTTAGGGGAAGGTGAATTTTGTGGCCATTCCCTGTaGTTGTTCCAAAGCACAGCA +
Preference number: 2 (lower is better)
Translates to: GSYHMICWEAWGLGEGEFCGHSL*LFQSTA
Trigger: TGCTGTGCTTTGGAACAATCACAGGGAATGGCCACA...AAATTCACCTTCCCCTAAACCCCAAGCTTCCCAACAGATCATATGGTAGGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR TCA 90 bp CTGCTCCAACATTGTGCCAGGAAGATTCTTCTGAACACAAGAGCTCTAAGGCTGTGTGGCCATTCCCTGTaGTTGTTCCAAAGCACAGCA +
Preference number: 2 (lower is better)
Translates to: LLQHCARKILLNTRALRLCGHSL*LFQSTA
Trigger: TGCTGTGCTTTGGAACAATCACAGGGAATGGCCACA...CAGCCTTAGAGCTCTTGTGTTCAGAAGAATCTTCCTGGCACAATGTTGGAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR TCA 90 bp GCTCTGCTGTGGCTTTTTGAAGCCAGAGTGAAGAAAGACTGGGTTAGTACAGCATGTGGCCATTCCCTGTaGTTGTTCCAAAGCACAGCA +
Preference number: 2 (lower is better)
Translates to: ALLWLFEARVKKDWVSTACGHSL*LFQSTA
Trigger: TGCTGTGCTTTGGAACAATCACAGGGAATGGCCACA...TGCTGTACTAACCCAGTCTTTCTTCACTCTGGCTTCAAAAAGCCACAGCAGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR TCA 90 bp GCCCACAAATGTCCTCGTCCCATTCTCCATGCAAGCATTGGTCCTCTGGCAAATAAAATGAGAGTCATGTaGCCCAAGTACGGATTCAGG +
Preference number: 2 (lower is better)
Translates to: AHKCPRPILHASIGPLANKMRVM*PKYGFR
Trigger: CCTGAATCCGTACTTGGGTCACATGACTCTCATTTT...ATTTGCCAGAGGACCAATGCTTGCATGGAGAATGGGACGAGGACATTTGTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR TCA 90 bp AACATAAAGGCCACAAGTTCTGTGGGTCCCAGAGGCCTGCTGCTCCAACATTGTTCTGCTGTGGCTTTTTaGAGCCAGAGTGAAGAAAGA +
Preference number: 2 (lower is better)
Translates to: NIKATSSVGPRGLLLQHCSAVAF*SQSEER
Trigger: TCTTTCTTCACTCTGGCTTCAAAAAGCCACAGCAGA...ACAATGTTGGAGCAGCAGGCCTCTGGGACCCACAGAACTTGTGGCCTTTATGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR TCA 90 bp GCCAGCTTGGCTGTTGAAGCCCAAGTAACTGGCAGAGACTCCTGCCATGCCATTTTATTCCCCATCTCCTaGAAAGGAAACACATTTCAG +
Preference number: 2 (lower is better)
Translates to: ASLAVEAQVTGRDSCHAILFPIS*KGNTFQ
Trigger: CTGAAATGTGTTTCCTTTTCAGGAGATGGGGAATAA...AATGGCATGGCAGGAGTCTCTGCCAGTTACTTGGGCTTCAACAGCCAAGCTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR TCA 90 bp CTGCTCCAACATTGTGCCAGGAAGATTCTTCTGAACACAAGAGCTCTAAGGCTGCTGGTCAAAACACTCTaGGAGTGCTACCTCTCTGAG +
Preference number: 2 (lower is better)
Translates to: LLQHCARKILLNTRALRLLVKTL*ECYLSE
Trigger: CTCAGAGAGGTAGCACTCTCAGAGTGTTTTGACCAG...CAGCCTTAGAGCTCTTGTGTTCAGAAGAATCTTCCTGGCACAATGTTGGAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR GCA 90 bp GCTCTGCTGTGGCTTTTTGAAGCCAGAGTGAAGAAAGACTGGGTTAGTACAGCACAGGTAAAAAGGCTCTaGCTTGCTAATGCCCAGGAG +
Preference number: 2 (lower is better)
Translates to: ALLWLFEARVKKDWVSTAQVKRL*LANAQE
Trigger: CTCCTGGGCATTAGCAAGGCAGAGCCTTTTTACCTG...TGCTGTACTAACCCAGTCTTTCTTCACTCTGGCTTCAAAAAGCCACAGCAGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR GCA 90 bp GGGTCCTACCATATGATCTGTTGGGAAGCTTGGGGTTTAGGGGAAGGTGAATTTGCGGTGACAATGCTCTaGTGTGGCTTTTTGAAGCCA +
Preference number: 2 (lower is better)
Translates to: GSYHMICWEAWGLGEGEFAVTML*CGFLKP
Trigger: TGGCTTCAAAAAGCCACAGCAGAGCATTGTCACCGC...AAATTCACCTTCCCCTAAACCCCAAGCTTCCCAACAGATCATATGGTAGGACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CCA 90 bp ATGCGGTTAAAAGTTGTTTCAACGGGCGGGCGTGGAACAGTTATTACAGCTGTTTCCTGCCCTCTAAATTaGCTCGAGGTTGCTGAGTGC +
Preference number: 2 (lower is better)
Translates to: MRLKVVSTGGRGTVITAVSCPLN*LEVAEC
Trigger: GCACTCAGCAACCTCGAGCCAATTTAGAGGGCAGGA...AACAGCTGTAATAACTGTTCCACGCCCGCCCGTTGAAACAACTTTTAACCGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338901.4
3UTR-3UTR CCA 90 bp GCTCTGCTGTGGCTTTTTGAAGCCAGAGTGAAGAAAGACTGGGTTAGTACAGCAGCTTCATGTAAACCCTaGGGCTCCATCAACTGTCCT +
Preference number: 2 (lower is better)
Translates to: ALLWLFEARVKKDWVSTAASCKP*GSINCP
Trigger: AGGACAGTTGATGGAGCCCCAGGGTTTACATGAAGC...TGCTGTACTAACCCAGTCTTTCTTCACTCTGGCTTCAAAAAGCCACAGCAGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CCA 90 bp GCATCTCTGGGTTTCTCCCCGGAACTCTCAAGGATTTCAGTTCCCAATTACCACATCTGTTGGGAAGCTTaGGGTTTAGGGGAAGGTGAA +
Preference number: 2 (lower is better)
Translates to: ASLGFSPELSRISVPNYHICWEA*GLGEGE
Trigger: TTCACCTTCCCCTAAACCCCAAGCTTCCCAACAGAT...GTGGTAATTGGGAACTGAAATCCTTGAGAGTTCCGGGGAGAAACCCAGAGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CCA 90 bp AACATAAAGGCCACAAGTTCTGTGGGTCCCAGAGGCCTGCTGCTCCAACATTGTTACCATATGATCTGTTaGGAAGCTTGGGGTTTAGGG +
Preference number: 2 (lower is better)
Translates to: NIKATSSVGPRGLLLQHCYHMIC*EAWGLG
Trigger: CCCTAAACCCCAAGCTTCCCAACAGATCATATGGTA...ACAATGTTGGAGCAGCAGGCCTCTGGGACCCACAGAACTTGTGGCCTTTATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CCA 90 bp GCCCACAAATGTCCTCGTCCCATTCTCCATGCAAGCATTGGTCCTCTGGCAAATTACCATATGATCTGTTaGGAAGCTTGGGGTTTAGGG +
Preference number: 2 (lower is better)
Translates to: AHKCPRPILHASIGPLANYHMIC*EAWGLG
Trigger: CCCTAAACCCCAAGCTTCCCAACAGATCATATGGTA...ATTTGCCAGAGGACCAATGCTTGCATGGAGAATGGGACGAGGACATTTGTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CCA 90 bp AACATAAAGGCCACAAGTTCTGTGGGTCCCAGAGGCCTGCTGCTCCAACATTGTGTCTGCGGCTTAAACTaGTCAAAACACTCTGAGAGT +
Preference number: 2 (lower is better)
Translates to: NIKATSSVGPRGLLLQHCVCGLN*SKHSES
Trigger: ACTCTCAGAGTGTTTTGACCAGTTTAAGCCGCAGAC...ACAATGTTGGAGCAGCAGGCCTCTGGGACCCACAGAACTTGTGGCCTTTATGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CCA 90 bp CCAGCTGTCTTTTGTGCCAGCTTGGCTGTTGAAGCCCAAGTAACTGGCAGAGACGTCTCTAAGGTATGGTaGAAAGAGATAAGGAGTCAC +
Preference number: 2 (lower is better)
Translates to: PAVFCASLAVEAQVTGRDVSKVW*KEIRSH
Trigger: GTGACTCCTTATCTCTTTCCACCATACCTTAGAGAC...GTCTCTGCCAGTTACTTGGGCTTCAACAGCCAAGCTGGCACAAAAGACAGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR CAA 90 bp CACAGTATAGAGCAGAAAGAACATTCCCACTGCCAAGGATGCTCCTaGGCAGGTTTCTCTTATGGTCTCTGCCAAAAGCACCTGCCTTTT +
Preference number: 2 (lower is better)
Translates to: HSIEQKEHSHCQGCS*AGFSYGLCQKHLPF
Trigger: AAAAGGCAGGTGCTTTTGGCAGAGACCATAAGAGAAACCTGCCAAGGAGCATCCTTGGCAGTGGGAATGTTCTTTCTGCTCTATACTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR TCA 90 bp GCATCTCTGGGTTTCTCCCCGGAACTCTCAAGGATTTCAGTTCCCAATTACCACTCTGCTGTGGCTTTTTaGAGCCAGAGTGAAGAAAGA +
Preference number: 2 (lower is better)
Translates to: ASLGFSPELSRISVPNYHSAVAF*SQSEER
Trigger: TCTTTCTTCACTCTGGCTTCAAAAAGCCACAGCAGA...GTGGTAATTGGGAACTGAAATCCTTGAGAGTTCCGGGGAGAAACCCAGAGATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR TCA 90 bp AGGCAGCATTACAGTAGCCTAAGGACTTGCTGGCACTGGGCCAGTCTTGTGCTTTTATTCCCCATCTCCTaGAAAGGAAACACATTTCAG +
Preference number: 2 (lower is better)
Translates to: RQHYSSLRTCWHWASLVLLFPIS*KGNTFQ
Trigger: CTGAAATGTGTTTCCTTTTCAGGAGATGGGGAATAA...AAGCACAAGACTGGCCCAGTGCCAGCAAGTCCTTAGGCTACTGTAATGCTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR GCA 90 bp GCCCACAAATGTCCTCGTCCCATTCTCCATGCAAGCATTGGTCCTCTGGCAAATTTCTCTTATGGTCTCTaGCAAAAGCACCTGCCTTTT +
Preference number: 2 (lower is better)
Translates to: AHKCPRPILHASIGPLANFSYGL*QKHLPF
Trigger: AAAAGGCAGGTGCTTTTGGCAGAGACCATAAGAGAA...ATTTGCCAGAGGACCAATGCTTGCATGGAGAATGGGACGAGGACATTTGTGGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR GCA 90 bp TTTCAGGAACAAGAGGAGCAGACTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTAACGTCCACTTGGGTTaGAGCAAACTTGAACAAAAT +
Preference number: 2 (lower is better)
Translates to: FQEQEEQTVQGWPSQVWANVHLG*SKLEQN
Trigger: ATTTTGTTCAAGTTTGCTGCAACCCAAGTGGACGTT...AGCCCAAACCTGGGAAGGCCAGCCTTGTACAGTCTGCTCCTCTTGTTCCTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR GCA 90 bp CTGCTCCAACATTGTGCCAGGAAGATTCTTCTGAACACAAGAGCTCTAAGGCTGGTTCTTGTTGGTTTCTaGTACAACTGCGGACTGTCC +
Preference number: 2 (lower is better)
Translates to: LLQHCARKILLNTRALRLVLVGF*YNCGLS
Trigger: GGACAGTCCGCAGTTGTAGCAGAAACCAACAAGAAC...CAGCCTTAGAGCTCTTGTGTTCAGAAGAATCTTCCTGGCACAATGTTGGAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR GCA 90 bp AATCAGCTTTCTTCTTTGTGCTCACAGGGCCTAGAGGAGCCTCCAGGCAGGGATAGAATGGTATCAGGATaGTCTTTAGGGGCACAATTA +
Preference number: 2 (lower is better)
Translates to: NQLSSLCSQGLEEPPGRDRMVSG*SLGAQL
Trigger: TAATTGTGCCCCTAAAGAGCATCCTGATACCATTCT...ATCCCTGCCTGGAGGCTCCTCTAGGCCCTGTGAGCACAAAGAAGAAAGCTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CCA 90 bp GGGTCCTACCATATGATCTGTTGGGAAGCTTGGGGTTTAGGGGAAGGTGAATTTTCACCCTGGAGTCACTaGGGAATAAATAACACTGGG +
Preference number: 2 (lower is better)
Translates to: GSYHMICWEAWGLGEGEFSPWSH*GINNTG
Trigger: CCCAGTGTTATTTATTCCCCAGTGACTCCAGGGTGA...AAATTCACCTTCCCCTAAACCCCAAGCTTCCCAACAGATCATATGGTAGGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CCA 90 bp GCATCTCTGGGTTTCTCCCCGGAACTCTCAAGGATTTCAGTTCCCAATTACCACAACTCAAGGTCATTCTaGAAAGTCAAGCAGGCCTTG +
Preference number: 2 (lower is better)
Translates to: ASLGFSPELSRISVPNYHNSRSF*KVKQAL
Trigger: CAAGGCCTGCTTGACTTTCCAGAATGACCTTGAGTT...GTGGTAATTGGGAACTGAAATCCTTGAGAGTTCCGGGGAGAAACCCAGAGATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CCA 90 bp TTTCAGGAACAAGAGGAGCAGACTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTATAAGTCAGTCAACATaGAACCAAAGAAGGTTCTGC +
Preference number: 2 (lower is better)
Translates to: FQEQEEQTVQGWPSQVWAISQST*NQRRFC
Trigger: GCAGAACCTTCTTTGGTTCCATGTTGACTGACTTAT...AGCCCAAACCTGGGAAGGCCAGCCTTGTACAGTCTGCTCCTCTTGTTCCTGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CCA 90 bp AGGCAGCATTACAGTAGCCTAAGGACTTGCTGGCACTGGGCCAGTCTTGTGCTTATAAGTCAGTCAACATaGAACCAAAGAAGGTTCTGC +
Preference number: 2 (lower is better)
Translates to: RQHYSSLRTCWHWASLVLISQST*NQRRFC
Trigger: GCAGAACCTTCTTTGGTTCCATGTTGACTGACTTAT...AAGCACAAGACTGGCCCAGTGCCAGCAAGTCCTTAGGCTACTGTAATGCTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CCA 90 bp GCCCACAAATGTCCTCGTCCCATTCTCCATGCAAGCATTGGTCCTCTGGCAAATCCAAACATGAAGGAGTaGTTCTTGTTGGTTTCTGCT +
Preference number: 2 (lower is better)
Translates to: AHKCPRPILHASIGPLANPNMKE*FLLVSA
Trigger: AGCAGAAACCAACAAGAACCACTCCTTCATGTTTGG...ATTTGCCAGAGGACCAATGCTTGCATGGAGAATGGGACGAGGACATTTGTGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR CAA 90 bp AACTGTCCTGTTAACTCAAGGTCATTCTGGAAAGTCAAGCAGGCCTaGTCACCCTGGAGTCACTGGGGAATAAATAACACTGGGGCATTT +
Preference number: 2 (lower is better)
Translates to: NCPVNSRSFWKVKQA*SPWSHWGINNTGAF
Trigger: AAATGCCCCAGTGTTATTTATTCCCCAGTGACTCCAGGGTGACAAGGCCTGCTTGACTTTCCAGAATGACCTTGAGTTAACAGGACAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR TCA 90 bp CTGAGAGACCCTGGTAGTATCAAAGTCTCTAAGGTATGGTGGAAAGAGATAAGGAAGGGAAGGCACAGCTaGGAAATAAGTACCCGCTGT +
Preference number: 2 (lower is better)
Translates to: LRDPGSIKVSKVWWKEIRKGRHS*EISTRC
Trigger: ACAGCGGGTACTTATTTCTCAGCTGTGCCTTCCCTT...CCTTATCTCTTTCCACCATACCTTAGAGACTTTGATACTACCAGGGTCTCTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR GCA 90 bp CTGAGAGACCCTGGTAGTATCAAAGTCTCTAAGGTATGGTGGAAAGAGATAAGGGCATTTCTCTGCGGCTaGAACACCAATACACCTCAC +
Preference number: 2 (lower is better)
Translates to: LRDPGSIKVSKVWWKEIRAFLCG*NTNTPH
Trigger: GTGAGGTGTATTGGTGTTGCAGCCGCAGAGAAATGC...CCTTATCTCTTTCCACCATACCTTAGAGACTTTGATACTACCAGGGTCTCTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR GCA 90 bp CTGCTCCAACATTGTGCCAGGAAGATTCTTCTGAACACAAGAGCTCTAAGGCTGGGGGTTGAAGAGTCATaGCATAAGTCAGTCAACATG +
Preference number: 2 (lower is better)
Translates to: LLQHCARKILLNTRALRLGVEES*HKSVNM
Trigger: CATGTTGACTGACTTATGGCATGACTCTTCAACCCC...CAGCCTTAGAGCTCTTGTGTTCAGAAGAATCTTCCTGGCACAATGTTGGAGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR GCA 90 bp CTGAGAGACCCTGGTAGTATCAAAGTCTCTAAGGTATGGTGGAAAGAGATAAGGTTGCTTTCTCTGGCCTaGTGCCCTGGATCCTCATTT +
Preference number: 2 (lower is better)
Translates to: LRDPGSIKVSKVWWKEIRLLSLA*CPGSSF
Trigger: AAATGAGGATCCAGGGCAGCAGGCCAGAGAAAGCAA...CCTTATCTCTTTCCACCATACCTTAGAGACTTTGATACTACCAGGGTCTCTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR GCA 90 bp AACATAAAGGCCACAAGTTCTGTGGGTCCCAGAGGCCTGCTGCTCCAACATTGTTTGGTGAATTTCAGCTaGCTGAAGGAAATTATTCCC +
Preference number: 2 (lower is better)
Translates to: NIKATSSVGPRGLLLQHCLVNFS*LKEIIP
Trigger: GGGAATAATTTCCTTCAGGCAGCTGAAATTCACCAA...ACAATGTTGGAGCAGCAGGCCTCTGGGACCCACAGAACTTGTGGCCTTTATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR GCA 90 bp CTGAGAGACCCTGGTAGTATCAAAGTCTCTAAGGTATGGTGGAAAGAGATAAGGGCCAAGCAGTGTGGTTaGTTAGAAAGGGAAGGCACA +
Preference number: 2 (lower is better)
Translates to: LRDPGSIKVSKVWWKEIRAKQCG*LEREGT
Trigger: TGTGCCTTCCCTTTCTAAGCAACCACACTGCTTGGC...CCTTATCTCTTTCCACCATACCTTAGAGACTTTGATACTACCAGGGTCTCTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR GCA 90 bp CTGAGAGACCCTGGTAGTATCAAAGTCTCTAAGGTATGGTGGAAAGAGATAAGGCACCTCACCTTGGGTTaGAAGGCTGTCATTAGCAAC +
Preference number: 2 (lower is better)
Translates to: LRDPGSIKVSKVWWKEIRHLTLG*KAVISN
Trigger: GTTGCTAATGACAGCCTTGCAACCCAAGGTGAGGTG...CCTTATCTCTTTCCACCATACCTTAGAGACTTTGATACTACCAGGGTCTCTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR GCA 90 bp TGGGTTTCTCCCCGGAACTCTCAAGGATTTCAGTTCCCAATTACCACTTTTATTTTAGGGCCAGACACATaGCTGGAGTTCACCTCACCT +
Preference number: 2 (lower is better)
Translates to: WVSPRNSQGFQFPITTFILGPDT*LEFTSP
Trigger: AGGTGAGGTGAACTCCAGGCATGTGTCTGGCCCTAA...AATAAAAGTGGTAATTGGGAACTGAAATCCTTGAGAGTTCCGGGGAGAAACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CCA 90 bp CTGAGAGACCCTGGTAGTATCAAAGTCTCTAAGGTATGGTGGAAAGAGATAAGGAAGGGCCAAGCAGTGTaGTTGCTTAGAAAGGGAAGG +
Preference number: 2 (lower is better)
Translates to: LRDPGSIKVSKVWWKEIRKGQAV*LLRKGR
Trigger: CCTTCCCTTTCTAAGCAACCACACTGCTTGGCCCTT...CCTTATCTCTTTCCACCATACCTTAGAGACTTTGATACTACCAGGGTCTCTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CCA 90 bp GAACTCTCAAGGATTTCAGTTCCCAATTACCACTTTTATTGGTTCTCTCTAGACGGCCAGACACATGCCTaGAGTTCACCTCACCTTGGG +
Preference number: 2 (lower is better)
Translates to: ELSRISVPNYHFYWFSLDGQTHA*SSPHLG
Trigger: CCCAAGGTGAGGTGAACTCCAGGCATGTGTCTGGCC...GTCTAGAGAGAACCAATAAAAGTGGTAATTGGGAACTGAAATCCTTGAGAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CCA 90 bp AGGCAGCATTACAGTAGCCTAAGGACTTGCTGGCACTGGGCCAGTCTTGTGCTTAAAGTCTCTAAGGTATaGTGGAAAGAGATAAGGAGT +
Preference number: 2 (lower is better)
Translates to: RQHYSSLRTCWHWASLVLKVSKV*WKEIRS
Trigger: ACTCCTTATCTCTTTCCACCATACCTTAGAGACTTT...AAGCACAAGACTGGCCCAGTGCCAGCAAGTCCTTAGGCTACTGTAATGCTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR TCA 90 bp GAACTCTCAAGGATTTCAGTTCCCAATTACCACTTTTATTGGTTCTCTCTAGACTTTAGGGGAGCAGCATaGGCACCTGCGGTGACAATG +
Preference number: 2 (lower is better)
Translates to: ELSRISVPNYHFYWFSLDFRGAA*APAVTM
Trigger: CATTGTCACCGCAGGTGCTCATGCTGCTCCCCTAAA...GTCTAGAGAGAACCAATAAAAGTGGTAATTGGGAACTGAAATCCTTGAGAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR TCA 90 bp AACATAAAGGCCACAAGTTCTGTGGGTCCCAGAGGCCTGCTGCTCCAACATTGTATTATTTTCCAAACATaGAGGAGTGGTTCTTGTTGG +
Preference number: 2 (lower is better)
Translates to: NIKATSSVGPRGLLLQHCIIFQT*RSGSCW
Trigger: CCAACAAGAACCACTCCTTCATGTTTGGAAAATAAT...ACAATGTTGGAGCAGCAGGCCTCTGGGACCCACAGAACTTGTGGCCTTTATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR GCA 90 bp GAACTCTCAAGGATTTCAGTTCCCAATTACCACTTTTATTGGTTCTCTCTAGACCAGATCCCTGCTCAGTaGCTAGACACTGGCTTCTCC +
Preference number: 2 (lower is better)
Translates to: ELSRISVPNYHFYWFSLDQIPAQ*LDTGFS
Trigger: GGAGAAGCCAGTGTCTAGGCACTGAGCAGGGATCTG...GTCTAGAGAGAACCAATAAAAGTGGTAATTGGGAACTGAAATCCTTGAGAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR GCA 90 bp GCATCTCTGGGTTTCTCCCCGGAACTCTCAAGGATTTCAGTTCCCAATTACCACTTGGTGAATTTCAGCTaGCTGAAGGAAATTATTCCC +
Preference number: 2 (lower is better)
Translates to: ASLGFSPELSRISVPNYHLVNFS*LKEIIP
Trigger: GGGAATAATTTCCTTCAGGCAGCTGAAATTCACCAA...GTGGTAATTGGGAACTGAAATCCTTGAGAGTTCCGGGGAGAAACCCAGAGATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CCA 90 bp TGGGTTTCTCCCCGGAACTCTCAAGGATTTCAGTTCCCAATTACCACTTTTATTCTTTCAGATAAGGCCTaGCCTAACGTCCACTTGGGT +
Preference number: 2 (lower is better)
Translates to: WVSPRNSQGFQFPITTFILSDKA*PNVHLG
Trigger: ACCCAAGTGGACGTTAGGCCAGGCCTTATCTGAAAG...AATAAAAGTGGTAATTGGGAACTGAAATCCTTGAGAGTTCCGGGGAGAAACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR TCA 90 bp CTGAGAGACCCTGGTAGTATCAAAGTCTCTAAGGTATGGTGGAAAGAGATAAGGATTACCATCGAGGAATaGAATCAGGCATCTCTGGGT +
Preference number: 2 (lower is better)
Translates to: LRDPGSIKVSKVWWKEIRITIEE*NQASLG
Trigger: ACCCAGAGATGCCTGATTTCATTCCTCGATGGTAAT...CCTTATCTCTTTCCACCATACCTTAGAGACTTTGATACTACCAGGGTCTCTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CCA 90 bp GAACTCTCAAGGATTTCAGTTCCCAATTACCACTTTTATTGGTTCTCTCTAGACAGGCGGGCAGGTTTGTaGCCATTCCCTGTGATTGTT +
Preference number: 2 (lower is better)
Translates to: ELSRISVPNYHFYWFSLDRRAGL*PFPVIV
Trigger: AACAATCACAGGGAATGGCCACAAACCTGCCCGCCT...GTCTAGAGAGAACCAATAAAAGTGGTAATTGGGAACTGAAATCCTTGAGAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CCA 90 bp TGGGTTTCTCCCCGGAACTCTCAAGGATTTCAGTTCCCAATTACCACTTTTATTATCTGTTGGGAAGCTTaGGGTTTAGGGGAAGGTGAA +
Preference number: 2 (lower is better)
Translates to: WVSPRNSQGFQFPITTFIICWEA*GLGEGE
Trigger: TTCACCTTCCCCTAAACCCCAAGCTTCCCAACAGAT...AATAAAAGTGGTAATTGGGAACTGAAATCCTTGAGAGTTCCGGGGAGAAACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR CAA 90 bp ATTTTAGTGCAACAAACAATAGATCTGACAACAGGGACCTCGGGGTaGAAGAGTCATGCCATAAGTCAGTCAACATGGAACCAAAGAAGG +
Preference number: 2 (lower is better)
Translates to: ILVQQTIDLTTGTSG*KSHAISQSTWNQRR
Trigger: CCTTCTTTGGTTCCATGTTGACTGACTTATGGCATGACTCTTCAACCCCGAGGTCCCTGTTGTCAGATCTATTGTTTGTTGCACTAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR TCA 90 bp GAACTCTCAAGGATTTCAGTTCCCAATTACCACTTTTATTGGTTCTCTCTAGACTTTAGAAGGCTGTGGTaGGGGCTAAGAGTCACAGGT +
Preference number: 2 (lower is better)
Translates to: ELSRISVPNYHFYWFSLDFRRLW*GLRVTG
Trigger: ACCTGTGACTCTTAGCCCTCACCACAGCCTTCTAAA...GTCTAGAGAGAACCAATAAAAGTGGTAATTGGGAACTGAAATCCTTGAGAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR TCA 90 bp CTGCTCCAACATTGTGCCAGGAAGATTCTTCTGAACACAAGAGCTCTAAGGCTGATTATTTTCCAAACATaGAGGAGTGGTTCTTGTTGG +
Preference number: 2 (lower is better)
Translates to: LLQHCARKILLNTRALRLIIFQT*RSGSCW
Trigger: CCAACAAGAACCACTCCTTCATGTTTGGAAAATAAT...CAGCCTTAGAGCTCTTGTGTTCAGAAGAATCTTCCTGGCACAATGTTGGAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR GCA 90 bp GGGTCCTACCATATGATCTGTTGGGAAGCTTGGGGTTTAGGGGAAGGTGAATTTGGAAAATTCTGTTTGTaGCCAGGTAAGCTAAAGAAT +
Preference number: 2 (lower is better)
Translates to: GSYHMICWEAWGLGEGEFGKFCL*PGKLKN
Trigger: ATTCTTTAGCTTACCTGGGCACAAACAGAATTTTCC...AAATTCACCTTCCCCTAAACCCCAAGCTTCCCAACAGATCATATGGTAGGACCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR GCA 90 bp GCTCTGCTGTGGCTTTTTGAAGCCAGAGTGAAGAAAGACTGGGTTAGTACAGCAGGAAAATTCTGTTTGTaGCCAGGTAAGCTAAAGAAT +
Preference number: 2 (lower is better)
Translates to: ALLWLFEARVKKDWVSTAGKFCL*PGKLKN
Trigger: ATTCTTTAGCTTACCTGGGCACAAACAGAATTTTCC...TGCTGTACTAACCCAGTCTTTCTTCACTCTGGCTTCAAAAAGCCACAGCAGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR GCA 90 bp GAACTCTCAAGGATTTCAGTTCCCAATTACCACTTTTATTGGTTCTCTCTAGACCACCTCACCTTGGGTTaGAAGGCTGTCATTAGCAAC +
Preference number: 2 (lower is better)
Translates to: ELSRISVPNYHFYWFSLDHLTLG*KAVISN
Trigger: GTTGCTAATGACAGCCTTGCAACCCAAGGTGAGGTG...GTCTAGAGAGAACCAATAAAAGTGGTAATTGGGAACTGAAATCCTTGAGAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR GCA 90 bp TCAAGGATTTCAGTTCCCAATTACCACTTTTATTGGTTCTCTCTAGACCTCAAATTAGGGCCAGACACATaGCTGGAGTTCACCTCACCT +
Preference number: 2 (lower is better)
Translates to: SRISVPNYHFYWFSLDLKLGPDT*LEFTSP
Trigger: AGGTGAGGTGAACTCCAGGCATGTGTCTGGCCCTAA...TTTGAGGTCTAGAGAGAACCAATAAAAGTGGTAATTGGGAACTGAAATCCTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CCA 90 bp TGGGTTTCTCCCCGGAACTCTCAAGGATTTCAGTTCCCAATTACCACTTTTATTAACTCAAGGTCATTCTaGAAAGTCAAGCAGGCCTTG +
Preference number: 2 (lower is better)
Translates to: WVSPRNSQGFQFPITTFINSRSF*KVKQAL
Trigger: CAAGGCCTGCTTGACTTTCCAGAATGACCTTGAGTT...AATAAAAGTGGTAATTGGGAACTGAAATCCTTGAGAGTTCCGGGGAGAAACCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CCA 90 bp GAACTCTCAAGGATTTCAGTTCCCAATTACCACTTTTATTGGTTCTCTCTAGACGGCCTAACGTCCACTTaGGTTGCAGCAAACTTGAAC +
Preference number: 2 (lower is better)
Translates to: ELSRISVPNYHFYWFSLDGLTST*VAANLN
Trigger: GTTCAAGTTTGCTGCAACCCAAGTGGACGTTAGGCC...GTCTAGAGAGAACCAATAAAAGTGGTAATTGGGAACTGAAATCCTTGAGAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CCA 90 bp CTGAGAGACCCTGGTAGTATCAAAGTCTCTAAGGTATGGTGGAAAGAGATAAGGAGAGTGAAGAAAGACTaGGTTAGTACAGCATCAGCT +
Preference number: 2 (lower is better)
Translates to: LRDPGSIKVSKVWWKEIRRVKKD*VSTASA
Trigger: AGCTGATGCTGTACTAACCCAGTCTTTCTTCACTCT...CCTTATCTCTTTCCACCATACCTTAGAGACTTTGATACTACCAGGGTCTCTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CCA 90 bp GAACTCTCAAGGATTTCAGTTCCCAATTACCACTTTTATTGGTTCTCTCTAGACAAGGGCCAAGCAGTGTaGTTGCTTAGAAAGGGAAGG +
Preference number: 2 (lower is better)
Translates to: ELSRISVPNYHFYWFSLDKGQAV*LLRKGR
Trigger: CCTTCCCTTTCTAAGCAACCACACTGCTTGGCCCTT...GTCTAGAGAGAACCAATAAAAGTGGTAATTGGGAACTGAAATCCTTGAGAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CCA 90 bp TGGGTTTCTCCCCGGAACTCTCAAGGATTTCAGTTCCCAATTACCACTTTTATTGTCTGCGGCTTAAACTaGTCAAAACACTCTGAGAGT +
Preference number: 2 (lower is better)
Translates to: WVSPRNSQGFQFPITTFIVCGLN*SKHSES
Trigger: ACTCTCAGAGTGTTTTGACCAGTTTAAGCCGCAGAC...AATAAAAGTGGTAATTGGGAACTGAAATCCTTGAGAGTTCCGGGGAGAAACCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR GCA 90 bp TCAAGGATTTCAGTTCCCAATTACCACTTTTATTGGTTCTCTCTAGACCTCAAAACTGGGGCATTTCTCTaGGGCTGCAACACCAATACA +
Preference number: 2 (lower is better)
Translates to: SRISVPNYHFYWFSLDLKTGAFL*GCNTNT
Trigger: TGTATTGGTGTTGCAGCCGCAGAGAAATGCCCCAGT...TTTGAGGTCTAGAGAGAACCAATAAAAGTGGTAATTGGGAACTGAAATCCTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR GCA 90 bp CTGAGAGACCCTGGTAGTATCAAAGTCTCTAAGGTATGGTGGAAAGAGATAAGGAACGTCCACTTGGGTTaGAGCAAACTTGAACAAAAT +
Preference number: 2 (lower is better)
Translates to: LRDPGSIKVSKVWWKEIRNVHLG*SKLEQN
Trigger: ATTTTGTTCAAGTTTGCTGCAACCCAAGTGGACGTT...CCTTATCTCTTTCCACCATACCTTAGAGACTTTGATACTACCAGGGTCTCTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CCA 90 bp CTGAGAGACCCTGGTAGTATCAAAGTCTCTAAGGTATGGTGGAAAGAGATAAGGATAAGTCAGTCAACATaGAACCAAAGAAGGTTCTGC +
Preference number: 2 (lower is better)
Translates to: LRDPGSIKVSKVWWKEIRISQST*NQRRFC
Trigger: GCAGAACCTTCTTTGGTTCCATGTTGACTGACTTAT...CCTTATCTCTTTCCACCATACCTTAGAGACTTTGATACTACCAGGGTCTCTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CCA 90 bp TCAAGGATTTCAGTTCCCAATTACCACTTTTATTGGTTCTCTCTAGACCTCAAAGGCCTAACGTCCACTTaGGTTGCAGCAAACTTGAAC +
Preference number: 2 (lower is better)
Translates to: SRISVPNYHFYWFSLDLKGLTST*VAANLN
Trigger: GTTCAAGTTTGCTGCAACCCAAGTGGACGTTAGGCC...TTTGAGGTCTAGAGAGAACCAATAAAAGTGGTAATTGGGAACTGAAATCCTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CCA 90 bp GAACTCTCAAGGATTTCAGTTCCCAATTACCACTTTTATTGGTTCTCTCTAGACATCTGTTGGGAAGCTTaGGGTTTAGGGGAAGGTGAA +
Preference number: 2 (lower is better)
Translates to: ELSRISVPNYHFYWFSLDICWEA*GLGEGE
Trigger: TTCACCTTCCCCTAAACCCCAAGCTTCCCAACAGAT...GTCTAGAGAGAACCAATAAAAGTGGTAATTGGGAACTGAAATCCTTGAGAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR GCA 90 bp TGGGTTTCTCCCCGGAACTCTCAAGGATTTCAGTTCCCAATTACCACTTTTATTAACGTCCACTTGGGTTaGAGCAAACTTGAACAAAAT +
Preference number: 2 (lower is better)
Translates to: WVSPRNSQGFQFPITTFINVHLG*SKLEQN
Trigger: ATTTTGTTCAAGTTTGCTGCAACCCAAGTGGACGTT...AATAAAAGTGGTAATTGGGAACTGAAATCCTTGAGAGTTCCGGGGAGAAACCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CCA 90 bp TCAAGGATTTCAGTTCCCAATTACCACTTTTATTGGTTCTCTCTAGACCTCAAATCACCCTGGAGTCACTaGGGAATAAATAACACTGGG +
Preference number: 2 (lower is better)
Translates to: SRISVPNYHFYWFSLDLKSPWSH*GINNTG
Trigger: CCCAGTGTTATTTATTCCCCAGTGACTCCAGGGTGA...TTTGAGGTCTAGAGAGAACCAATAAAAGTGGTAATTGGGAACTGAAATCCTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CCA 90 bp GAACTCTCAAGGATTTCAGTTCCCAATTACCACTTTTATTGGTTCTCTCTAGACAACTCAAGGTCATTCTaGAAAGTCAAGCAGGCCTTG +
Preference number: 2 (lower is better)
Translates to: ELSRISVPNYHFYWFSLDNSRSF*KVKQAL
Trigger: CAAGGCCTGCTTGACTTTCCAGAATGACCTTGAGTT...GTCTAGAGAGAACCAATAAAAGTGGTAATTGGGAACTGAAATCCTTGAGAGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR GCA 90 bp GAACTCTCAAGGATTTCAGTTCCCAATTACCACTTTTATTGGTTCTCTCTAGACGGAAAATTCTGTTTGTaGCCAGGTAAGCTAAAGAAT +
Preference number: 2 (lower is better)
Translates to: ELSRISVPNYHFYWFSLDGKFCL*PGKLKN
Trigger: ATTCTTTAGCTTACCTGGGCACAAACAGAATTTTCC...GTCTAGAGAGAACCAATAAAAGTGGTAATTGGGAACTGAAATCCTTGAGAGTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CAA 90 bp AGGCAGCCCGCAGCCAGGGGCCGCGGGCGCGCGCGAGACTTTCCAAGTCAAGGGTGGGCAACTTCTCCCTaGCTCGCCTGGTCCCTCCCT +
Preference number: 3 (lower is better)
Translates to: RQPAARGRGRARDFPSQGWATSP*LAWSLP
Trigger: AGGGAGGGACCAGGCGAGCAAGGGAGAAGTTGCCCA...CCCTTGACTTGGAAAGTCTCGCGCGCGCCCGCGGCCCCTGGCTGCGGGCTGCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338901.4
3UTR TCA 72 bp TCCCTGGTCCTGCCCTCTAAATTGGCTCGAGGTTGCTaGGTGCTCCCAGGCCCCTGTGGCGGAGGGCCCTCG +
Preference number: 3 (lower is better)
Translates to: SLVLPSKLARGC*VLPGPCGGGPS
Trigger: CGAGGGCCCTCCGCCACAGGGGCCTGGGAGCACTCAGCAACCTCGAGCCAATTTAGAGGGCAGGACCAGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338901.4
3UTR CCA 72 bp GCTCGCCTGGTCCCTCCCTGGTCCTGCCCTCTAAATTaGCTCGAGGTTGCTGAGTGCTCCCAGGCCCCTGTG +
Preference number: 3 (lower is better)
Translates to: ARLVPPWSCPLN*LEVAECSQAPV
Trigger: CACAGGGGCCTGGGAGCACTCAGCAACCTCGAGCCAATTTAGAGGGCAGGACCAGGGAGGGACCAGGCGAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338901.4
3UTR CCA 72 bp GGATTAGCTGGGCCAGGGACCGAAGACAACCTGCCCTaGGCAACTTCTCCCTTGCTCGCCTGGTCCCTCCCT +
Preference number: 3 (lower is better)
Translates to: GLAGPGTEDNLP*ATSPLLAWSLP
Trigger: AGGGAGGGACCAGGCGAGCAAGGGAGAAGTTGCCCAGGGCAGGTTGTCTTCGGTCCCTGGCCCAGCTAATCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338901.4
3UTR CCA 72 bp CCCAGCAAGCTGCCACGGTGTGGCTGTCAGCTGGAGTaGGAAGAGCACTCCAACCCTCCTGCAGGCCACAGT +
Preference number: 3 (lower is better)
Translates to: PSKLPRCGCQLE*EEHSNPPAGHS
Trigger: ACTGTGGCCTGCAGGAGGGTTGGAGTGCTCTTCCCACTCCAGCTGACAGCCACACCGTGGCAGCTTGCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR CCA 72 bp CAAAGCCCAGCAAGCTGCCACGGTGTGGCTGTCAGCTaGAGTGGGAAGAGCACTCCAACCCTCCTGCAGGCC +
Preference number: 3 (lower is better)
Translates to: QSPASCHGVAVS*SGKSTPTLLQA
Trigger: GGCCTGCAGGAGGGTTGGAGTGCTCTTCCCACTCCAGCTGACAGCCACACCGTGGCAGCTTGCTGGGCTTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR CCA 72 bp TCCAAGTCAAGGGGTCCCCAGGGAGTCTGGATTAGCTaGGCCAGGGACCGAAGACAACCTGCCCTGGGCAAC +
Preference number: 3 (lower is better)
Translates to: SKSRGPQGVWIS*ARDRRQPALGN
Trigger: GTTGCCCAGGGCAGGTTGTCTTCGGTCCCTGGCCCAGCTAATCCAGACTCCCTGGGGACCCCTTGACTTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338901.4
3UTR CCA 72 bp GCGAGACTTTCCAAGTCAAGGGGTCCCCAGGGAGTCTaGATTAGCTGGGCCAGGGACCGAAGACAACCTGCC +
Preference number: 3 (lower is better)
Translates to: ARLSKSRGPQGV*ISWARDRRQPA
Trigger: GGCAGGTTGTCTTCGGTCCCTGGCCCAGCTAATCCAGACTCCCTGGGGACCCCTTGACTTGGAAAGTCTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338901.4
3UTR GCA 72 bp AACTTCTCCCTTGCTCGCCTGGTCCCTCCCTGGTCCTaGCCTCTAAATTGGCTCGAGGTTGCTGAGTGCTCC +
Preference number: 3 (lower is better)
Translates to: NFSLARLVPPWS*PLNWLEVAECS
Trigger: GGAGCACTCAGCAACCTCGAGCCAATTTAGAGGGCAGGACCAGGGAGGGACCAGGCGAGCAAGGGAGAAGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338901.4
3UTR-3UTR CAA 90 bp ACTTGCTGGCACTGGGCCAGTCTTGTGCTTTCCAGTCCAGAGGCTAGAGCTGGGCTCCCCAGCTACCTATaGCTTCCCTCATCATCCCTC +
Preference number: 3 (lower is better)
Translates to: TCWHWASLVLSSPEARAGLPSYL*LPSSSL
Trigger: GAGGGATGATGAGGGAAGCAATAGGTAGCTGGGGAG...CCCAGCTCTAGCCTCTGGACTGGAAAGCACAAGACTGGCCCAGTGCCAGCAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR TCA 72 bp CTGGCTTCTCCTGAGCCTGGCTTTAGGGGAGCAGCATaGGCACCTGCGGTGACAATGCTCTGCTGTGGCTTT +
Preference number: 3 (lower is better)
Translates to: LASPEPGFRGAA*APAVTMLCCGF
Trigger: AAAGCCACAGCAGAGCATTGTCACCGCAGGTGCTCATGCTGCTCCCCTAAAGCCAGGCTCAGGAGAAGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR TCA 72 bp CCAGACAACGGAGGCCTAGCCCATCACGTCTCACCCTaGCCCTTGAAGGGCCAAGCAGTGTGGTTGCTTAGA +
Preference number: 3 (lower is better)
Translates to: PDNGGLAHHVSP*PLKGQAVWLLR
Trigger: TCTAAGCAACCACACTGCTTGGCCCTTCAAGGGTCAGGGTGAGACGTGATGGGCTAGGCCTCCGTTGTCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR TCA 72 bp GCCTCCGCCAGCTGTCTTTTGTGCCAGCTTGGCTGTTaGAGCCCAAGTAACTGGCAGAGACTCCTGCCATGC +
Preference number: 3 (lower is better)
Translates to: ASASCLLCQLGC*SPSNWQRLLPC
Trigger: GCATGGCAGGAGTCTCTGCCAGTTACTTGGGCTTCAACAGCCAAGCTGGCACAAAAGACAGCTGGCGGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR GCA 72 bp TCCAAAGCACAGCAAACTTCCCAAAGCCCAGCAAGCTaGCACGGTGTGGCTGTCAGCTGGAGTGGGAAGAGC +
Preference number: 3 (lower is better)
Translates to: SKAQQTSQSPAS*HGVAVSWSGKS
Trigger: GCTCTTCCCACTCCAGCTGACAGCCACACCGTGGCAGCTTGCTGGGCTTTGGGAAGTTTGCTGTGCTTTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR GCA 72 bp TACCCCCTCACTCTGCTGAGTCTGGAGGTTGGTGCTTaGTCACCACTTGGGGCAGGTCATCTTCCCTCTCTG +
Preference number: 3 (lower is better)
Translates to: YPLTLLSLEVGA*SPLGAGHLPSL
Trigger: CAGAGAGGGAAGATGACCTGCCCCAAGTGGTGAGCAAGCACCAACCTCCAGACTCAGCAGAGTGAGGGGGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR GCA 72 bp GCTTTACCCCCTCACTCTGCTGAGTCTGGAGGTTGGTaGTTGCTCACCACTTGGGGCAGGTCATCTTCCCTC +
Preference number: 3 (lower is better)
Translates to: ALPPHSAESGGW*LLTTWGRSSSL
Trigger: GAGGGAAGATGACCTGCCCCAAGTGGTGAGCAAGCACCAACCTCCAGACTCAGCAGAGTGAGGGGGTAAAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CAA 90 bp CTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTGGATCTAGCACCCAGAAACCAGAAAGTCAAGCAGGCCTaGTCACCCTGGAGTCACTGG +
Preference number: 3 (lower is better)
Translates to: LYKAGLPRFGLDLAPRNQKVKQA*SPWSHW
Trigger: CCAGTGACTCCAGGGTGACAAGGCCTGCTTGACTTT...CTGGTTTCTGGGTGCTAGATCCAGCCCAAACCTGGGAAGGCCAGCCTTGTACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CAA 90 bp ACTTGCTGGCACTGGGCCAGTCTTGTGCTTTCCAGTCCAGAGGCTAGAGCTGGGGGAGTTCACCTCACCTaGGGTTGCAAGGCTGTCATT +
Preference number: 3 (lower is better)
Translates to: TCWHWASLVLSSPEARAGGVHLT*GCKAVI
Trigger: AATGACAGCCTTGCAACCCAAGGTGAGGTGAACTCC...CCCAGCTCTAGCCTCTGGACTGGAAAGCACAAGACTGGCCCAGTGCCAGCAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR TCA 72 bp ATGTGGGACAGGAACTGCTTTACCCCCTCACTCTGCTaGGTCTGGAGGTTGGTGCTTGCTCACCACTTGGGG +
Preference number: 3 (lower is better)
Translates to: MWDRNCFTPSLC*VWRLVLAHHLG
Trigger: CCCCAAGTGGTGAGCAAGCACCAACCTCCAGACTCAGCAGAGTGAGGGGGTAAAGCAGTTCCTGTCCCACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR GCA 72 bp GCCAGACACATGCCTGGAGTTCACCTCACCTTGGGTTaGAAGGCTGTCATTAGCAACCAGACAACGGAGGCC +
Preference number: 3 (lower is better)
Translates to: ARHMPGVHLTLG*KAVISNQTTEA
Trigger: GGCCTCCGTTGTCTGGTTGCTAATGACAGCCTTGCAACCCAAGGTGAGGTGAACTCCAGGCATGTGTCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR CCA 72 bp ACTGCTTTACCCCCTCACTCTGCTGAGTCTGGAGGTTaGTGCTTGCTCACCACTTGGGGCAGGTCATCTTCC +
Preference number: 3 (lower is better)
Translates to: TALPPHSAESGG*CLLTTWGRSSS
Trigger: GGAAGATGACCTGCCCCAAGTGGTGAGCAAGCACCAACCTCCAGACTCAGCAGAGTGAGGGGGTAAAGCAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CAA 90 bp CCAGCTGTCTTTTGTGCCAGCTTGGCTGTTGAAGCCCAAGTAACTGGCAGAGACGTCTGGAGTGCACCTTaGCTTTCTCTGGCCTGCTGC +
Preference number: 3 (lower is better)
Translates to: PAVFCASLAVEAQVTGRDVWSAP*LSLACC
Trigger: GCAGCAGGCCAGAGAAAGCAAAGGTGCACTCCAGAC...GTCTCTGCCAGTTACTTGGGCTTCAACAGCCAAGCTGGCACAAAAGACAGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CAA 90 bp CAGACTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTGGATCTAGCACCCAGAAACTTAGGCGGGCAGGTTaGTGGCCATTCCCTGTGATT +
Preference number: 3 (lower is better)
Translates to: QTVQGWPSQVWAGSSTQKLRRAG*WPFPVI
Trigger: AATCACAGGGAATGGCCACAAACCTGCCCGCCTAAG...TTTCTGGGTGCTAGATCCAGCCCAAACCTGGGAAGGCCAGCCTTGTACAGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CAA 90 bp ACTTGCTGGCACTGGGCCAGTCTTGTGCTTTCCAGTCCAGAGGCTAGAGCTGGGCCTGCTGCTCCAACATaGTGCCAGGAAGATTCTTCT +
Preference number: 3 (lower is better)
Translates to: TCWHWASLVLSSPEARAGPAAPT*CQEDSS
Trigger: AGAAGAATCTTCCTGGCACAATGTTGGAGCAGCAGG...CCCAGCTCTAGCCTCTGGACTGGAAAGCACAAGACTGGCCCAGTGCCAGCAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR GCA 72 bp TGGGTCCTGAGGCAGCATTACAGTAGCCTAAGGACTTaGTGGCACTGGGCCAGTCTTGTGCTTTCCAGTCCA +
Preference number: 3 (lower is better)
Translates to: WVLRQHYSSLRT*WHWASLVLSSP
Trigger: TGGACTGGAAAGCACAAGACTGGCCCAGTGCCAGCAAGTCCTTAGGCTACTGTAATGCTGCCTCAGGACCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR CCA 72 bp GTCCTGAGGCAGCATTACAGTAGCCTAAGGACTTGCTaGCACTGGGCCAGTCTTGTGCTTTCCAGTCCAGAG +
Preference number: 3 (lower is better)
Translates to: VLRQHYSSLRTC*HWASLVLSSPE
Trigger: CTCTGGACTGGAAAGCACAAGACTGGCCCAGTGCCAGCAAGTCCTTAGGCTACTGTAATGCTGCCTCAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CAA 90 bp ACTTGCTGGCACTGGGCCAGTCTTGTGCTTTCCAGTCCAGAGGCTAGAGCTGGGTGGGTTGCAGCAAACTaGAACAAAATCCCTCTGTCC +
Preference number: 3 (lower is better)
Translates to: TCWHWASLVLSSPEARAGWVAAN*NKIPLS
Trigger: GGACAGAGGGATTTTGTTCAAGTTTGCTGCAACCCA...CCCAGCTCTAGCCTCTGGACTGGAAAGCACAAGACTGGCCCAGTGCCAGCAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CAA 90 bp GACTCTTTTTGCCACAGAGCCCCTGGCAGCCGAGAGGACGGGTATTACCATCGATGGCCTAACGTCCACTaGGGTTGCAGCAAACTTGAA +
Preference number: 3 (lower is better)
Translates to: DSFCHRAPGSREDGYYHRWPNVH*GCSKLE
Trigger: TTCAAGTTTGCTGCAACCCAAGTGGACGTTAGGCCA...TCGATGGTAATACCCGTCCTCTCGGCTGCCAGGGGCTCTGTGGCAAAAAGAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CAA 90 bp CTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTGGATCTAGCACCCAGAAACCAGTGGCCTAACGTCCACTaGGGTTGCAGCAAACTTGAA +
Preference number: 3 (lower is better)
Translates to: LYKAGLPRFGLDLAPRNQWPNVH*GCSKLE
Trigger: TTCAAGTTTGCTGCAACCCAAGTGGACGTTAGGCCA...CTGGTTTCTGGGTGCTAGATCCAGCCCAAACCTGGGAAGGCCAGCCTTGTACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CAA 90 bp AGGCAGCATTACAGTAGCCTAAGGACTTGCTGGCACTGGGCCAGTCTTGTGCTTCTCCCCAGCTACCTATaGCTTCCCTCATCATCCCTC +
Preference number: 3 (lower is better)
Translates to: RQHYSSLRTCWHWASLVLLPSYL*LPSSSL
Trigger: GAGGGATGATGAGGGAAGCAATAGGTAGCTGGGGAG...AAGCACAAGACTGGCCCAGTGCCAGCAAGTCCTTAGGCTACTGTAATGCTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR TCA 72 bp AGGGTCTTAGGCGGGCAGGTTTGTGGCCATTCCCTGTaGTTGTTCCAAAGCACAGCAAACTTCCCAAAGCCC +
Preference number: 3 (lower is better)
Translates to: RVLGGQVCGHSL*LFQSTANFPKP
Trigger: GGGCTTTGGGAAGTTTGCTGTGCTTTGGAACAATCACAGGGAATGGCCACAAACCTGCCCGCCTAAGACCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR CCA 72 bp ACATTTCAGGAACAAGAGGAGCAGACTGTACAAGGCTaGCCTTCCCAGGTTTGGGCTGGATCTAGCACCCAG +
Preference number: 3 (lower is better)
Translates to: TFQEQEEQTVQG*PSQVWAGSSTQ
Trigger: CTGGGTGCTAGATCCAGCCCAAACCTGGGAAGGCCAGCCTTGTACAGTCTGCTCCTCTTGTTCCTGAAATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR CCA 72 bp CAGACCTGGCTGAAGCTCCAGGTCTGCGGCTTAAACTaGTCAAAACACTCTGAGAGTGCTACCTCTCTGAGC +
Preference number: 3 (lower is better)
Translates to: QTWLKLQVCGLN*SKHSESATSLS
Trigger: GCTCAGAGAGGTAGCACTCTCAGAGTGTTTTGACCAGTTTAAGCCGCAGACCTGGAGCTTCAGCCAGGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR CCA 72 bp CTTCCAGCCTGGAGTTTGTGGGTGGAAGAAAGAAGATaGCCATGTGGGACAGGAACTGCTTTACCCCCTCAC +
Preference number: 3 (lower is better)
Translates to: LPAWSLWVEERR*PCGTGTALPPH
Trigger: GTGAGGGGGTAAAGCAGTTCCTGTCCCACATGGCCATCTTCTTTCTTCCACCCACAAACTCCAGGCTGGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR CCA 72 bp AGGCAGCATTACAGTAGCCTAAGGACTTGCTGGCACTaGGCCAGTCTTGTGCTTTCCAGTCCAGAGGCTAGA +
Preference number: 3 (lower is better)
Translates to: RQHYSSLRTCWH*ASLVLSSPEAR
Trigger: TCTAGCCTCTGGACTGGAAAGCACAAGACTGGCCCAGTGCCAGCAAGTCCTTAGGCTACTGTAATGCTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CAA 90 bp CTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTGGATCTAGCACCCAGAAACCAGTGGGTTGCAGCAAACTaGAACAAAATCCCTCTGTCC +
Preference number: 3 (lower is better)
Translates to: LYKAGLPRFGLDLAPRNQWVAAN*NKIPLS
Trigger: GGACAGAGGGATTTTGTTCAAGTTTGCTGCAACCCA...CTGGTTTCTGGGTGCTAGATCCAGCCCAAACCTGGGAAGGCCAGCCTTGTACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CAA 90 bp CAGACTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTGGATCTAGCACCCAGAAATGGCCTAACGTCCACTaGGGTTGCAGCAAACTTGAA +
Preference number: 3 (lower is better)
Translates to: QTVQGWPSQVWAGSSTQKWPNVH*GCSKLE
Trigger: TTCAAGTTTGCTGCAACCCAAGTGGACGTTAGGCCA...TTTCTGGGTGCTAGATCCAGCCCAAACCTGGGAAGGCCAGCCTTGTACAGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CAA 90 bp GCCCACAAATGTCCTCGTCCCATTCTCCATGCAAGCATTGGTCCTCTGGCAAATCTCCCCAGCTACCTATaGCTTCCCTCATCATCCCTC +
Preference number: 3 (lower is better)
Translates to: AHKCPRPILHASIGPLANLPSYL*LPSSSL
Trigger: GAGGGATGATGAGGGAAGCAATAGGTAGCTGGGGAG...ATTTGCCAGAGGACCAATGCTTGCATGGAGAATGGGACGAGGACATTTGTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CAA 90 bp CCAGCTGTCTTTTGTGCCAGCTTGGCTGTTGAAGCCCAAGTAACTGGCAGAGACACCTCTGTCATCTGCTaGCCCACAAATGTCCTCGTC +
Preference number: 3 (lower is better)
Translates to: PAVFCASLAVEAQVTGRDTSVIC*PTNVLV
Trigger: GACGAGGACATTTGTGGGCAAGCAGATGACAGAGGT...GTCTCTGCCAGTTACTTGGGCTTCAACAGCCAAGCTGGCACAAAAGACAGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR GCA 72 bp CAGCTTTGGAGTCAGACCTGGCTGAAGCTCCAGGTCTaGGGCTTAAACTGGTCAAAACACTCTGAGAGTGCT +
Preference number: 3 (lower is better)
Translates to: QLWSQTWLKLQV*GLNWSKHSESA
Trigger: AGCACTCTCAGAGTGTTTTGACCAGTTTAAGCCGCAGACCTGGAGCTTCAGCCAGGTCTGACTCCAAAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR CCA 72 bp TGGAAAGTCAAGCAGGCCTTGTCACCCTGGAGTCACTaGGGAATAAATAACACTGGGGCATTTCTCTGCGGC +
Preference number: 3 (lower is better)
Translates to: WKVKQALSPWSH*GINNTGAFLCG
Trigger: GCCGCAGAGAAATGCCCCAGTGTTATTTATTCCCCAGTGACTCCAGGGTGACAAGGCCTGCTTGACTTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR CCA 72 bp AATTCCACACAATGCTGTGGTGTAATGGAACAGCTTTaGAGTCAGACCTGGCTGAAGCTCCAGGTCTGCGGC +
Preference number: 3 (lower is better)
Translates to: NSTQCCGVMEQL*SQTWLKLQVCG
Trigger: GCCGCAGACCTGGAGCTTCAGCCAGGTCTGACTCCAAAGCTGTTCCATTACACCACAGCATTGTGTGGAATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR CCA 72 bp GCTTCCCTCATCATCCCTCGCCCTCTAGAGTTCCTTTaGAGGGTTCAGAATGAATCAAGGGTCCAGTGGAGA +
Preference number: 3 (lower is better)
Translates to: ASLIIPRPLEFL*RVQNESRVQWR
Trigger: TCTCCACTGGACCCTTGATTCATTCTGAACCCTCCAAAGGAACTCTAGAGGGCGAGGGATGATGAGGGAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CAA 90 bp GCATCTCTGGGTTTCTCCCCGGAACTCTCAAGGATTTCAGTTCCCAATTACCACAAAGTCAAGCAGGCCTaGTCACCCTGGAGTCACTGG +
Preference number: 3 (lower is better)
Translates to: ASLGFSPELSRISVPNYHKVKQA*SPWSHW
Trigger: CCAGTGACTCCAGGGTGACAAGGCCTGCTTGACTTT...GTGGTAATTGGGAACTGAAATCCTTGAGAGTTCCGGGGAGAAACCCAGAGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CAA 90 bp CCAGCTGTCTTTTGTGCCAGCTTGGCTGTTGAAGCCCAAGTAACTGGCAGAGACAAGTACCCGCTGTTCTaGGTGAATTTCAGCTGCCTG +
Preference number: 3 (lower is better)
Translates to: PAVFCASLAVEAQVTGRDKYPLF*VNFSCL
Trigger: CAGGCAGCTGAAATTCACCAAGAACAGCGGGTACTT...GTCTCTGCCAGTTACTTGGGCTTCAACAGCCAAGCTGGCACAAAAGACAGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CAA 90 bp GCCAGCTTGGCTGTTGAAGCCCAAGTAACTGGCAGAGACTCCTGCCATGCCATTTTCTCCATGCAAGCATaGGTCCTCTGGCAAATTCAC +
Preference number: 3 (lower is better)
Translates to: ASLAVEAQVTGRDSCHAIFSMQA*VLWQIH
Trigger: GTGAATTTGCCAGAGGACCAATGCTTGCATGGAGAA...AATGGCATGGCAGGAGTCTCTGCCAGTTACTTGGGCTTCAACAGCCAAGCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CAA 90 bp AATCAGCTTTCTTCTTTGTGCTCACAGGGCCTAGAGGAGCCTCCAGGCAGGGATGTCTTTTGTGCCAGCTaGGCTGTTGAAGCCCAAGTA +
Preference number: 3 (lower is better)
Translates to: NQLSSLCSQGLEEPPGRDVFCAS*AVEAQV
Trigger: TACTTGGGCTTCAACAGCCAAGCTGGCACAAAAGAC...ATCCCTGCCTGGAGGCTCCTCTAGGCCCTGTGAGCACAAAGAAGAAAGCTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CAA 90 bp GCTCTGCTGTGGCTTTTTGAAGCCAGAGTGAAGAAAGACTGGGTTAGTACAGCAAAAGTCAAGCAGGCCTaGTCACCCTGGAGTCACTGG +
Preference number: 3 (lower is better)
Translates to: ALLWLFEARVKKDWVSTAKVKQA*SPWSHW
Trigger: CCAGTGACTCCAGGGTGACAAGGCCTGCTTGACTTT...TGCTGTACTAACCCAGTCTTTCTTCACTCTGGCTTCAAAAAGCCACAGCAGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CAA 90 bp CTGCTCCAACATTGTGCCAGGAAGATTCTTCTGAACACAAGAGCTCTAAGGCTGCTTAGGCGGGCAGGTTaGTGGCCATTCCCTGTGATT +
Preference number: 3 (lower is better)
Translates to: LLQHCARKILLNTRALRLLRRAG*WPFPVI
Trigger: AATCACAGGGAATGGCCACAAACCTGCCCGCCTAAG...CAGCCTTAGAGCTCTTGTGTTCAGAAGAATCTTCCTGGCACAATGTTGGAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CAA 90 bp ACTTGCTGGCACTGGGCCAGTCTTGTGCTTTCCAGTCCAGAGGCTAGAGCTGGGAATGGAAAATTCTGTTaGTGCCCAGGTAAGCTAAAG +
Preference number: 3 (lower is better)
Translates to: TCWHWASLVLSSPEARAGNGKFC*CPGKLK
Trigger: CTTTAGCTTACCTGGGCACAAACAGAATTTTCCATT...CCCAGCTCTAGCCTCTGGACTGGAAAGCACAAGACTGGCCCAGTGCCAGCAAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CAA 90 bp CTGCTCCAACATTGTGCCAGGAAGATTCTTCTGAACACAAGAGCTCTAAGGCTGTCCTATCCTCACCCCTaGCCCTTTCTAGGCCAGGTA +
Preference number: 3 (lower is better)
Translates to: LLQHCARKILLNTRALRLSYPHP*PFLGQV
Trigger: TACCTGGCCTAGAAAGGGCAAGGGGTGAGGATAGGA...CAGCCTTAGAGCTCTTGTGTTCAGAAGAATCTTCCTGGCACAATGTTGGAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CAA 90 bp TTTCAGGAACAAGAGGAGCAGACTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTCTACCATATGATCTGTaGGGAAGCTTGGGGTTTAGG +
Preference number: 3 (lower is better)
Translates to: FQEQEEQTVQGWPSQVWALPYDL*GSLGFR
Trigger: CCTAAACCCCAAGCTTCCCAACAGATCATATGGTAG...AGCCCAAACCTGGGAAGGCCAGCCTTGTACAGTCTGCTCCTCTTGTTCCTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CAA 90 bp GCCCACAAATGTCCTCGTCCCATTCTCCATGCAAGCATTGGTCCTCTGGCAAATAAGTACCCGCTGTTCTaGGTGAATTTCAGCTGCCTG +
Preference number: 3 (lower is better)
Translates to: AHKCPRPILHASIGPLANKYPLF*VNFSCL
Trigger: CAGGCAGCTGAAATTCACCAAGAACAGCGGGTACTT...ATTTGCCAGAGGACCAATGCTTGCATGGAGAATGGGACGAGGACATTTGTGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CAA 90 bp CTGCTCCAACATTGTGCCAGGAAGATTCTTCTGAACACAAGAGCTCTAAGGCTGGGCCAAGCAGTGTGGTaGCTTAGAAAGGGAAGGCAC +
Preference number: 3 (lower is better)
Translates to: LLQHCARKILLNTRALRLGQAVW*LRKGRH
Trigger: GTGCCTTCCCTTTCTAAGCAACCACACTGCTTGGCC...CAGCCTTAGAGCTCTTGTGTTCAGAAGAATCTTCCTGGCACAATGTTGGAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CAA 90 bp GCCCACAAATGTCCTCGTCCCATTCTCCATGCAAGCATTGGTCCTCTGGCAAATAATGAAAGGAGGACTTaGCCCACAGTAGGGGCTCTA +
Preference number: 3 (lower is better)
Translates to: AHKCPRPILHASIGPLANNERRT*PTVGAL
Trigger: TAGAGCCCCTACTGTGGGCAAAGTCCTCCTTTCATT...ATTTGCCAGAGGACCAATGCTTGCATGGAGAATGGGACGAGGACATTTGTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR GCA 72 bp TTCTGTGGGTCCCAGAGGCCTGCTGCTCCAACATTGTaGCAGGAAGATTCTTCTGAACACAAGAGCTCTAAG +
Preference number: 3 (lower is better)
Translates to: FCGSQRPAAPTL*QEDSSEHKSSK
Trigger: CTTAGAGCTCTTGTGTTCAGAAGAATCTTCCTGGCACAATGTTGGAGCAGCAGGCCTCTGGGACCCACAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR GCA 72 bp TTGGCTGTTGAAGCCCAAGTAACTGGCAGAGACTCCTaGCATGCCATTCTCCTTCAAACCTCTGTCATCTGC +
Preference number: 3 (lower is better)
Translates to: LAVEAQVTGRDS*HAILLQTSVIC
Trigger: GCAGATGACAGAGGTTTGAAGGAGAATGGCATGGCAGGAGTCTCTGCCAGTTACTTGGGCTTCAACAGCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR CCA 72 bp GGCTCCATCAACTGTCCTGTTAACTCAAGGTCATTCTaGAAAGTCAAGCAGGCCTTGTCACCCTGGAGTCAC +
Preference number: 3 (lower is better)
Translates to: GSINCPVNSRSF*KVKQALSPWSH
Trigger: GTGACTCCAGGGTGACAAGGCCTGCTTGACTTTCCAGAATGACCTTGAGTTAACAGGACAGTTGATGGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR CCA 72 bp CAAGTACGGATTCAGGGTCTTAGGCGGGCAGGTTTGTaGCCATTCCCTGTGATTGTTCCAAAGCACAGCAAA +
Preference number: 3 (lower is better)
Translates to: QVRIQGLRRAGL*PFPVIVPKHSK
Trigger: TTTGCTGTGCTTTGGAACAATCACAGGGAATGGCCACAAACCTGCCCGCCTAAGACCCTGAATCCGTACTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR CCA 72 bp CTGGCCTTTCAGATAAGGCCTGGCCTAACGTCCACTTaGGTTGCAGCAAACTTGAACAAAATCCCTCTGTCC +
Preference number: 3 (lower is better)
Translates to: LAFQIRPGLTST*VAANLNKIPLS
Trigger: GGACAGAGGGATTTTGTTCAAGTTTGCTGCAACCCAAGTGGACGTTAGGCCAGGCCTTATCTGAAAGGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR CCA 72 bp AGCAGCATGAGCACCTGCGGTGACAATGCTCTGCTGTaGCTTTTTGAAGCCAGAGTGAAGAAAGACTGGGTT +
Preference number: 3 (lower is better)
Translates to: SSMSTCGDNALL*LFEARVKKDWV
Trigger: AACCCAGTCTTTCTTCACTCTGGCTTCAAAAAGCCACAGCAGAGCATTGTCACCGCAGGTGCTCATGCTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR CCA 72 bp GGGGCTCTACACATGATGGTTGGCTGGTTCCTAGGATaGGTGAAAGAACATAAAGGCCACAAGTTCTGTGGG +
Preference number: 3 (lower is better)
Translates to: GALHMMVGWFLG*VKEHKGHKFCG
Trigger: CCCACAGAACTTGTGGCCTTTATGTTCTTTCACCCATCCTAGGAACCAGCCAACCATCATGTGTAGAGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CAA 90 bp GCATCTCTGGGTTTCTCCCCGGAACTCTCAAGGATTTCAGTTCCCAATTACCACTGCCAAGGATGCTCCTaGGCAGGTTTCTCTTATGGT +
Preference number: 3 (lower is better)
Translates to: ASLGFSPELSRISVPNYHCQGCS*AGFSYG
Trigger: ACCATAAGAGAAACCTGCCAAGGAGCATCCTTGGCA...GTGGTAATTGGGAACTGAAATCCTTGAGAGTTCCGGGGAGAAACCCAGAGATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CAA 90 bp ACTTGCTGGCACTGGGCCAGTCTTGTGCTTTCCAGTCCAGAGGCTAGAGCTGGGCAATTACCACTTTTATaGGTTCTCTCTAGACCTCAA +
Preference number: 3 (lower is better)
Translates to: TCWHWASLVLSSPEARAGQLPLL*VLSRPQ
Trigger: TTGAGGTCTAGAGAGAACCAATAAAAGTGGTAATTG...CCCAGCTCTAGCCTCTGGACTGGAAAGCACAAGACTGGCCCAGTGCCAGCAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR TCA 72 bp GTGTGGAGCACAGCTGTAAATAAAATGAGAGTCATGTaGCCCAAGTACGGATTCAGGGTCTTAGGCGGGCAG +
Preference number: 3 (lower is better)
Translates to: VWSTAVNKMRVM*PKYGFRVLGGQ
Trigger: CTGCCCGCCTAAGACCCTGAATCCGTACTTGGGTCACATGACTCTCATTTTATTTACAGCTGTGCTCCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR GCA 72 bp AGTCACTGGGGAATAAATAACACTGGGGCATTTCTCTaGGGCTGCAACACCAATACACCTCACTCCACAGCA +
Preference number: 3 (lower is better)
Translates to: SHWGINNTGAFL*GCNTNTPHSTA
Trigger: TGCTGTGGAGTGAGGTGTATTGGTGTTGCAGCCGCAGAGAAATGCCCCAGTGTTATTTATTCCCCAGTGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR GCA 72 bp TCTGCTTGCCCACAAATGTCCTCGTCCCATTCTCCATaGAAGCATTGGTCCTCTGGCAAATTCACACCAACA +
Preference number: 3 (lower is better)
Translates to: SACPQMSSSHSP*KHWSSGKFTPT
Trigger: TGTTGGTGTGAATTTGCCAGAGGACCAATGCTTGCATGGAGAATGGGACGAGGACATTTGTGGGCAAGCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CAA 90 bp GGGTCCTACCATATGATCTGTTGGGAAGCTTGGGGTTTAGGGGAAGGTGAATTTTGCCAAGGATGCTCCTaGGCAGGTTTCTCTTATGGT +
Preference number: 3 (lower is better)
Translates to: GSYHMICWEAWGLGEGEFCQGCS*AGFSYG
Trigger: ACCATAAGAGAAACCTGCCAAGGAGCATCCTTGGCA...AAATTCACCTTCCCCTAAACCCCAAGCTTCCCAACAGATCATATGGTAGGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CAA 90 bp CAGACTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTGGATCTAGCACCCAGAAAAATGGAAAATTCTGTTaGTGCCCAGGTAAGCTAAAG +
Preference number: 3 (lower is better)
Translates to: QTVQGWPSQVWAGSSTQKNGKFC*CPGKLK
Trigger: CTTTAGCTTACCTGGGCACAAACAGAATTTTCCATT...TTTCTGGGTGCTAGATCCAGCCCAAACCTGGGAAGGCCAGCCTTGTACAGTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CAA 90 bp GCATCTCTGGGTTTCTCCCCGGAACTCTCAAGGATTTCAGTTCCCAATTACCACTGGGTTGCAGCAAACTaGAACAAAATCCCTCTGTCC +
Preference number: 3 (lower is better)
Translates to: ASLGFSPELSRISVPNYHWVAAN*NKIPLS
Trigger: GGACAGAGGGATTTTGTTCAAGTTTGCTGCAACCCA...GTGGTAATTGGGAACTGAAATCCTTGAGAGTTCCGGGGAGAAACCCAGAGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR TCA 72 bp CCCTCGCCCTCTAGAGTTCCTTTGGAGGGTTCAGAATaGATCAAGGGTCCAGTGGAGATCCTATTTCCTTTA +
Preference number: 3 (lower is better)
Translates to: PSPSRVPLEGSE*IKGPVEILFPL
Trigger: TAAAGGAAATAGGATCTCCACTGGACCCTTGATTCATTCTGAACCCTCCAAAGGAACTCTAGAGGGCGAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR GCA 72 bp CTTTCAGATAAGGCCTGGCCTAACGTCCACTTGGGTTaGAGCAAACTTGAACAAAATCCCTCTGTCCTATCC +
Preference number: 3 (lower is better)
Translates to: LSDKAWPNVHLG*SKLEQNPSVLS
Trigger: GGATAGGACAGAGGGATTTTGTTCAAGTTTGCTGCAACCCAAGTGGACGTTAGGCCAGGCCTTATCTGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CAA 90 bp AACATAAAGGCCACAAGTTCTGTGGGTCCCAGAGGCCTGCTGCTCCAACATTGTATGAAGGAGTGGTTCTaGTTGGTTTCTGCTACAACT +
Preference number: 3 (lower is better)
Translates to: NIKATSSVGPRGLLLQHCMKEWF*LVSATT
Trigger: AGTTGTAGCAGAAACCAACAAGAACCACTCCTTCAT...ACAATGTTGGAGCAGCAGGCCTCTGGGACCCACAGAACTTGTGGCCTTTATGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR CCA 72 bp CATGGAACCAAAGAAGGTTCTGCTTCATGTAAACCCTaGGGCTCCATCAACTGTCCTGTTAACTCAAGGTCA +
Preference number: 3 (lower is better)
Translates to: HGTKEGSASCKP*GSINCPVNSRS
Trigger: TGACCTTGAGTTAACAGGACAGTTGATGGAGCCCCAGGGTTTACATGAAGCAGAACCTTCTTTGGTTCCATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR CCA 72 bp GTCCTCGTCCCATTCTCCATGCAAGCATTGGTCCTCTaGCAAATTCACACCAACATAATTCCAAACTGCACA +
Preference number: 3 (lower is better)
Translates to: VLVPFSMQALVL*QIHTNIIPNCT
Trigger: TGTGCAGTTTGGAATTATGTTGGTGTGAATTTGCCAGAGGACCAATGCTTGCATGGAGAATGGGACGAGGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CAA 90 bp GAACTCTCAAGGATTTCAGTTCCCAATTACCACTTTTATTGGTTCTCTCTAGACCTTAGGCGGGCAGGTTaGTGGCCATTCCCTGTGATT +
Preference number: 3 (lower is better)
Translates to: ELSRISVPNYHFYWFSLDLRRAG*WPFPVI
Trigger: AATCACAGGGAATGGCCACAAACCTGCCCGCCTAAG...GTCTAGAGAGAACCAATAAAAGTGGTAATTGGGAACTGAAATCCTTGAGAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CAA 90 bp GAACTCTCAAGGATTTCAGTTCCCAATTACCACTTTTATTGGTTCTCTCTAGACTCCTATCCTCACCCCTaGCCCTTTCTAGGCCAGGTA +
Preference number: 3 (lower is better)
Translates to: ELSRISVPNYHFYWFSLDSYPHP*PFLGQV
Trigger: TACCTGGCCTAGAAAGGGCAAGGGGTGAGGATAGGA...GTCTAGAGAGAACCAATAAAAGTGGTAATTGGGAACTGAAATCCTTGAGAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CAA 90 bp GAACTCTCAAGGATTTCAGTTCCCAATTACCACTTTTATTGGTTCTCTCTAGACGGCCAAGCAGTGTGGTaGCTTAGAAAGGGAAGGCAC +
Preference number: 3 (lower is better)
Translates to: ELSRISVPNYHFYWFSLDGQAVW*LRKGRH
Trigger: GTGCCTTCCCTTTCTAAGCAACCACACTGCTTGGCC...GTCTAGAGAGAACCAATAAAAGTGGTAATTGGGAACTGAAATCCTTGAGAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR CCA 72 bp GAAAATGCGGTTAAAAGTTGTTTCAACGGGCGGGCGTaGAACAGTTATTACAGCTGTTTACAGCTCCAACTC +
Preference number: 3 (lower is better)
Translates to: ENAVKSCFNGRA*NSYYSCLQLQL
Trigger: GAGTTGGAGCTGTAAACAGCTGTAATAACTGTTCCACGCCCGCCCGTTGAAACAACTTTTAACCGCATTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338901.4
3UTR CCA 72 bp GGTGCTGAGAGTGGACAGAGGGAAGACACAACTCATTaGTGTCCAAAGGAATATCCATTAGAATATCAGTGG +
Preference number: 3 (lower is better)
Translates to: GAESGQREDTTH*CPKEYPLEYQW
Trigger: CCACTGATATTCTAATGGATATTCCTTTGGACACCAATGAGTTGTGTCTTCCCTCTGTCCACTCTCAGCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527388.5
3UTR CCA 72 bp CTGAGAGACCCTGGTAGTATCAAAGTCTCTAAGGTATaGTGGAAAGAGATAAGGAGTCACACTAGTAGTTGT +
Preference number: 3 (lower is better)
Translates to: LRDPGSIKVSKV*WKEIRSHTSSC
Trigger: ACAACTACTAGTGTGACTCCTTATCTCTTTCCACCATACCTTAGAGACTTTGATACTACCAGGGTCTCTCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR CCA 72 bp CTCTCAAGGATTTCAGTTCCCAATTACCACTTTTATTaGTTCTCTCTAGACCTCAAATTCCACACAATGCTG +
Preference number: 3 (lower is better)
Translates to: LSRISVPNYHFY*FSLDLKFHTML
Trigger: CAGCATTGTGTGGAATTTGAGGTCTAGAGAGAACCAATAAAAGTGGTAATTGGGAACTGAAATCCTTGAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR-3UTR CAA 90 bp TCAAGGATTTCAGTTCCCAATTACCACTTTTATTGGTTCTCTCTAGACCTCAAAAATGGAAAATTCTGTTaGTGCCCAGGTAAGCTAAAG +
Preference number: 3 (lower is better)
Translates to: SRISVPNYHFYWFSLDLKNGKFC*CPGKLK
Trigger: CTTTAGCTTACCTGGGCACAAACAGAATTTTCCATT...TTTGAGGTCTAGAGAGAACCAATAAAAGTGGTAATTGGGAACTGAAATCCTTGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp CCTCCTCGACGGGAGCGTCGCCAACTTTTCTCGAGGCAGCCCGCAGCCAGGGGCGCAGGGACCCGTTCCTaGGCGACAGTGGCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: PPRRERRQLFSRQPAARGAGTRS*ATVAGR
Trigger: CCGCCCAGCCACTGTCGCGCAGGAACGGGTCCCTGC...GCCCCTGGCTGCGGGCTGCCTCGAGAAAAGTTGGCGACGCTCCCGTCGAGGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338901.4
CDS-3UTR GCA 90 bp AATTGGCTCGAGGTTGCTGAGTGCTCCCAGGCCCCTGTGGCGGAGGGCCCTCGCCAGAGGTGCCAGGGGTaGCCGAGCCGCCAAGGCGGG +
Preference number: 4 (lower is better)
Translates to: NWLEVAECSQAPVAEGPRQRCQG*PSRQGG
Trigger: CCCGCCTTGGCGGCTCGGGCACCCCTGGCACCTCTG...GCGAGGGCCCTCCGCCACAGGGGCCTGGGAGCACTCAGCAACCTCGAGCCAATT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338901.4
CDS-3UTR CCA 90 bp CTCGAGGCAGCCCGCAGCCAGGGGCCGCGGGCGCGCGCGAGACTTTCCAAGTCACCTCCGGGTAGCCCATaGCCTCCGGAGACACCCACT +
Preference number: 4 (lower is better)
Translates to: LEAARSQGPRARARLSKSPPGSP*PPETPT
Trigger: AGTGGGTGTCTCCGGAGGCCATGGGCTACCCGGAGG...TGACTTGGAAAGTCTCGCGCGCGCCCGCGGCCCCTGGCTGCGGGCTGCCTCGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338901.4
CDS-3UTR GCA 90 bp TCCTCGACGGGAGCGTCGCCAACTTTTCTCGAGGCAGCCCGCAGCCAGGGGCCGAGGCCCGGGAGCCGCTaGGTCTGCCTCAGCCGTTCA +
Preference number: 4 (lower is better)
Translates to: SSTGASPTFLEAARSQGPRPGSR*VCLSRS
Trigger: TGAACGGCTGAGGCAGACGCAGCGGCTCCCGGGCCT...CGGCCCCTGGCTGCGGGCTGCCTCGAGAAAAGTTGGCGACGCTCCCGTCGAGGA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338901.4
CDS-3UTR GCA 90 bp CCTCCTCGACGGGAGCGTCGCCAACTTTTCTCGAGGCAGCCCGCAGCCAGGGGCTTAGGGTGCCAGAGGTaGCAGGGGTGCCCGAGCCGC +
Preference number: 4 (lower is better)
Translates to: PPRRERRQLFSRQPAARGLGCQR*QGCPSR
Trigger: GCGGCTCGGGCACCCCTGGCACCTCTGGCACCCTAA...GCCCCTGGCTGCGGGCTGCCTCGAGAAAAGTTGGCGACGCTCCCGTCGAGGAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338901.4
CDS-3UTR TCA 90 bp CAGCGCAGGCACCTCCTCGACGGGAGCGTCGCCAACTTTTCTCGAGGCAGCCCGGCCGCCCCTACTAGGTaGCTCACCTGGTGCCCGTCC +
Preference number: 4 (lower is better)
Translates to: QRRHLLDGSVANFSRGSPAAPTR*LTWCPS
Trigger: GGACGGGCACCAGGTGAGTCACCTAGTAGGGGCGGC...CGGGCTGCCTCGAGAAAAGTTGGCGACGCTCCCGTCGAGGAGGTGCCTGCGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338901.4
CDS-3UTR CCA 90 bp GGCCGCGGGCGCGCGCGAGACTTTCCAAGTCAAGGGGTCCCCAGGGAGTCTGGATCTCCCTTGCTCGCCTaGTCCCTCCCTGGTCCTGCC +
Preference number: 4 (lower is better)
Translates to: GRGRARDFPSQGVPRESGSPLLA*SLPGPA
Trigger: GGCAGGACCAGGGAGGGACCAGGCGAGCAAGGGAGA...TCCAGACTCCCTGGGGACCCCTTGACTTGGAAAGTCTCGCGCGCGCCCGCGGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338901.4
CDS-3UTR TCA 90 bp CCTCCTCGACGGGAGCGTCGCCAACTTTTCTCGAGGCAGCCCGCAGCCAGGGGCGACGGCTGCCCAAGGTaGCTGGTGATGGGGCTGTCA +
Preference number: 4 (lower is better)
Translates to: PPRRERRQLFSRQPAARGDGCPR*LVMGLS
Trigger: TGACAGCCCCATCACCAGTCACCTTGGGCAGCCGTC...GCCCCTGGCTGCGGGCTGCCTCGAGAAAAGTTGGCGACGCTCCCGTCGAGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338901.4
CDS-3UTR GCA 90 bp CCTGCCCTGGGCAACTTCTCCCTTGCTCGCCTGGTCCCTCCCTGGTCCTGCCCTAGGCGGCTACTGTCCTaGCATCGGCTGGGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: PALGNFSLARLVPPWSCPRRLLS*HRLGAA
Trigger: TGCAGCCCCCAGCCGATGGCAGGACAGTAGCCGCCT...AGGGCAGGACCAGGGAGGGACCAGGCGAGCAAGGGAGAAGTTGCCCAGGGCAGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000338901.4
CDS-3UTR CCA 90 bp GCAGCGCAGGCACCTCCTCGACGGGAGCGTCGCCAACTTTTCTCGAGGCAGCCCTGTCCTGCCATCGGCTaGGGGCTGCAGGGACCCGTT +
Preference number: 4 (lower is better)
Translates to: AAQAPPRRERRQLFSRQPCPAIG*GLQGPV
Trigger: AACGGGTCCCTGCAGCCCCCAGCCGATGGCAGGACA...GGGCTGCCTCGAGAAAAGTTGGCGACGCTCCCGTCGAGGAGGTGCCTGCGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338901.4
CDS-3UTR CCA 90 bp CCTCCTCGACGGGAGCGTCGCCAACTTTTCTCGAGGCAGCCCGCAGCCAGGGGCGGTCCCCAGGGAGTCTaGATTAGCTGGGCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: PPRRERRQLFSRQPAARGGPQGV*ISWARD
Trigger: GTCCCTGGCCCAGCTAATCCAGACTCCCTGGGGACC...GCCCCTGGCTGCGGGCTGCCTCGAGAAAAGTTGGCGACGCTCCCGTCGAGGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338901.4
CDS-3UTR GCA 90 bp CACCTCCTCGACGGGAGCGTCGCCAACTTTTCTCGAGGCAGCCCGCAGCCAGGGGGGCAACTTCTCCCTTaGTCGCCTGGTCCCTCCCTG +
Preference number: 4 (lower is better)
Translates to: HLLDGSVANFSRGSPQPGGQLLP*SPGPSL
Trigger: CAGGGAGGGACCAGGCGAGCAAGGGAGAAGTTGCCC...CCCTGGCTGCGGGCTGCCTCGAGAAAAGTTGGCGACGCTCCCGTCGAGGAGGTG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000338901.4
CDS-3UTR CCA 90 bp AGACAACCTGCCCTGGGCAACTTCTCCCTTGCTCGCCTGGTCCCTCCCTGGTCCGTTCCTGCGCGACAGTaGCTGGGCGGGACGGAGCAG +
Preference number: 4 (lower is better)
Translates to: RQPALGNFSLARLVPPWSVPARQ*LGGTEQ
Trigger: CTGCTCCGTCCCGCCCAGCCACTGTCGCGCAGGAAC...GGACCAGGGAGGGACCAGGCGAGCAAGGGAGAAGTTGCCCAGGGCAGGTTGTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338901.4
CDS-3UTR GCA 90 bp GCTCGCCTGGTCCCTCCCTGGTCCTGCCCTCTAAATTGGCTCGAGGTTGCTGAGTCGCTCCCGCGGCGCTaGTGCAGGCAGGAGTTCCCT +
Preference number: 4 (lower is better)
Translates to: ARLVPPWSCPLNWLEVAESLPRR*CRQEFP
Trigger: AGGGAACTCCTGCCTGCAGCAGCGCCGCGGGAGCGA...CTCAGCAACCTCGAGCCAATTTAGAGGGCAGGACCAGGGAGGGACCAGGCGAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338901.4
CDS-3UTR TCA 90 bp ACAACCTGCCCTGGGCAACTTCTCCCTTGCTCGCCTGGTCCCTCCCTGGTCCTGGCCGTTCACGACCTCTaGCAGGCGGCTACTGTCCTG +
Preference number: 4 (lower is better)
Translates to: TTCPGQLLPCSPGPSLVLAVHDL*QAATVL
Trigger: CAGGACAGTAGCCGCCTGTCAGAGGTCGTGAACGGC...CAGGACCAGGGAGGGACCAGGCGAGCAAGGGAGAAGTTGCCCAGGGCAGGTTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338901.4
CDS-3UTR GCA 90 bp GCGCGCGCGAGACTTTCCAAGTCAAGGGGTCCCCAGGGAGTCTGGATTAGCTGGGGGAGCCGCTGCGTCTaGCTCAGCCGTTCACGACCT +
Preference number: 4 (lower is better)
Translates to: ARARLSKSRGPQGVWISWGSRCV*LSRSRP
Trigger: AGGTCGTGAACGGCTGAGGCAGACGCAGCGGCTCCC...CCAGCTAATCCAGACTCCCTGGGGACCCCTTGACTTGGAAAGTCTCGCGCGCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000338901.4
CDS-3UTR GCA 90 bp ACTTGCTGGCACTGGGCCAGTCTTGTGCTTTCCAGTCCAGAGGCTAGAGCTGGGCTCCCGCGGCGCTGCTaGAGGCAGGAGTTCCCTGCG +
Preference number: 4 (lower is better)
Translates to: TCWHWASLVLSSPEARAGLPRRC*RQEFPA
Trigger: CGCAGGGAACTCCTGCCTGCAGCAGCGCCGCGGGAG...CCCAGCTCTAGCCTCTGGACTGGAAAGCACAAGACTGGCCCAGTGCCAGCAAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374552.9
ENST00000374553.6
CDS-3UTR GCA 90 bp CAGCGCAGGCACCTCCTCGACGGGAGCGTCGCCAACTTTTCTCGAGGCAGCCCGGGTTCCAATGGCTGCTaGTTAGGTGACGGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: QRRHLLDGSVANFSRGSPGSNGC*LGDGCP
Trigger: TGGGCAGCCGTCACCTAAGCAGCAGCCATTGGAACC...CGGGCTGCCTCGAGAAAAGTTGGCGACGCTCCCGTCGAGGAGGTGCCTGCGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338901.4
CDS-3UTR CCA 90 bp CAAACTTCCCAAAGCCCAGCAAGCTGCCACGGTGTGGCTGTCAGCTGGAGTGGGGTTCCTGCGCGACAGTaGCTGGGCGGGACGGAGCAG +
Preference number: 4 (lower is better)
Translates to: QTSQSPASCHGVAVSWSGVPARQ*LGGTEQ
Trigger: CTGCTCCGTCCCGCCCAGCCACTGTCGCGCAGGAAC...CCCACTCCAGCTGACAGCCACACCGTGGCAGCTTGCTGGGCTTTGGGAAGTTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374552.9
ENST00000374553.6
CDS-3UTR TCA 90 bp GCGCGCGCGAGACTTTCCAAGTCAAGGGGTCCCCAGGGAGTCTGGATTAGCTGGTTGGCTCGAGGTTGCTaGGTGCTCCCAGGCCCCTGT +
Preference number: 4 (lower is better)
Translates to: ARARLSKSRGPQGVWISWLARGC*VLPGPC
Trigger: ACAGGGGCCTGGGAGCACTCAGCAACCTCGAGCCAA...CCAGCTAATCCAGACTCCCTGGGGACCCCTTGACTTGGAAAGTCTCGCGCGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338901.4
CDS-3UTR TCA 90 bp CAAACTTCCCAAAGCCCAGCAAGCTGCCACGGTGTGGCTGTCAGCTGGAGTGGGGCCTGGCCAGGCTCCTaGAGGGGGCCAAGTACTTCC +
Preference number: 4 (lower is better)
Translates to: QTSQSPASCHGVAVSWSGAWPGS*RGPSTS
Trigger: GGAAGTACTTGGCCCCCTTCAGGAGCCTGGCCAGGC...CCCACTCCAGCTGACAGCCACACCGTGGCAGCTTGCTGGGCTTTGGGAAGTTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp ACTTGCTGGCACTGGGCCAGTCTTGTGCTTTCCAGTCCAGAGGCTAGAGCTGGGAGGCCCGGGAGCCGCTaGGTCTGCCTCAGCCGTTCA +
Preference number: 4 (lower is better)
Translates to: TCWHWASLVLSSPEARAGRPGSR*VCLSRS
Trigger: TGAACGGCTGAGGCAGACGCAGCGGCTCCCGGGCCT...CCCAGCTCTAGCCTCTGGACTGGAAAGCACAAGACTGGCCCAGTGCCAGCAAGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374552.9
ENST00000374553.6
CDS-3UTR GCA 90 bp ATGACGCCAGGTGAAACAGCTCCCACTGAGGGACTGAGACGACTCGTGTGCTTTCAGAGGTGCCAGGGGTaGCCGAGCCGCCAAGGCGGG +
Preference number: 4 (lower is better)
Translates to: MTPGETAPTEGLRRLVCFQRCQG*PSRQGG
Trigger: CCCGCCTTGGCGGCTCGGGCACCCCTGGCACCTCTG...AAAGCACACGAGTCGTCTCAGTCCCTCAGTGGGAGCTGTTTCACCTGGCGTCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525810.5
ENST00000527388.5
CDS-3UTR GCA 90 bp ACTTGCTGGCACTGGGCCAGTCTTGTGCTTTCCAGTCCAGAGGCTAGAGCTGGGTTAGGGTGCCAGAGGTaGCAGGGGTGCCCGAGCCGC +
Preference number: 4 (lower is better)
Translates to: TCWHWASLVLSSPEARAGLGCQR*QGCPSR
Trigger: GCGGCTCGGGCACCCCTGGCACCTCTGGCACCCTAA...CCCAGCTCTAGCCTCTGGACTGGAAAGCACAAGACTGGCCCAGTGCCAGCAAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374552.9
ENST00000374553.6
CDS-3UTR CCA 90 bp GACTCTTTTTGCCACAGAGCCCCTGGCAGCCGAGAGGACGGGTATTACCATCGACTGCGCGACAGTGGCTaGGCGGGACGGAGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: DSFCHRAPGSREDGYYHRLRDSG*AGRSRE
Trigger: CTCCCTGCTCCGTCCCGCCCAGCCACTGTCGCGCAG...TCGATGGTAATACCCGTCCTCTCGGCTGCCAGGGGCTCTGTGGCAAAAAGAGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374552.9
ENST00000374553.6
CDS-3UTR CCA 90 bp CAAACTTCCCAAAGCCCAGCAAGCTGCCACGGTGTGGCTGTCAGCTGGAGTGGGCCTCCGGGTAGCCCATaGCCTCCGGAGACACCCACT +
Preference number: 4 (lower is better)
Translates to: QTSQSPASCHGVAVSWSGPPGSP*PPETPT
Trigger: AGTGGGTGTCTCCGGAGGCCATGGGCTACCCGGAGG...CCCACTCCAGCTGACAGCCACACCGTGGCAGCTTGCTGGGCTTTGGGAAGTTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374552.9
ENST00000374553.6
CDS-3UTR CCA 90 bp AATTGGCTCGAGGTTGCTGAGTGCTCCCAGGCCCCTGTGGCGGAGGGCCCTCGCGGAGTCTGGATTAGCTaGGCCAGGGACCGAAGACAA +
Preference number: 4 (lower is better)
Translates to: NWLEVAECSQAPVAEGPRGVWIS*ARDRRQ
Trigger: TTGTCTTCGGTCCCTGGCCCAGCTAATCCAGACTCC...GCGAGGGCCCTCCGCCACAGGGGCCTGGGAGCACTCAGCAACCTCGAGCCAATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338901.4
CDS-3UTR TCA 90 bp CTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTGGATCTAGCACCCAGAAACCAGTCTTCTGCCGGGCCTTaGGGAGGCAGACGCCTGCGG +
Preference number: 4 (lower is better)
Translates to: LYKAGLPRFGLDLAPRNQSSAGP*GGRRLR
Trigger: CCGCAGGCGTCTGCCTCCTCAAGGCCCGGCAGAAGA...CTGGTTTCTGGGTGCTAGATCCAGCCCAAACCTGGGAAGGCCAGCCTTGTACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp ATGACGCCAGGTGAAACAGCTCCCACTGAGGGACTGAGACGACTCGTGTGCTTTGCAGGGACCCGTTCCTaGGCGACAGTGGCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: MTPGETAPTEGLRRLVCFAGTRS*ATVAGR
Trigger: CCGCCCAGCCACTGTCGCGCAGGAACGGGTCCCTGC...AAAGCACACGAGTCGTCTCAGTCCCTCAGTGGGAGCTGTTTCACCTGGCGTCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525810.5
ENST00000527388.5
CDS-3UTR GCA 90 bp CTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTGGATCTAGCACCCAGAAACCAGAGGCCCGGGAGCCGCTaGGTCTGCCTCAGCCGTTCA +
Preference number: 4 (lower is better)
Translates to: LYKAGLPRFGLDLAPRNQRPGSR*VCLSRS
Trigger: TGAACGGCTGAGGCAGACGCAGCGGCTCCCGGGCCT...CTGGTTTCTGGGTGCTAGATCCAGCCCAAACCTGGGAAGGCCAGCCTTGTACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374552.9
ENST00000374553.6
CDS-3UTR GCA 90 bp TTTCAGGAACAAGAGGAGCAGACTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTCAGAGGTGCCAGGGGTaGCCGAGCCGCCAAGGCGGG +
Preference number: 4 (lower is better)
Translates to: FQEQEEQTVQGWPSQVWAQRCQG*PSRQGG
Trigger: CCCGCCTTGGCGGCTCGGGCACCCCTGGCACCTCTG...AGCCCAAACCTGGGAAGGCCAGCCTTGTACAGTCTGCTCCTCTTGTTCCTGAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374552.9
ENST00000374553.6
CDS-3UTR CCA 90 bp CCTCCTCGACGGGAGCGTCGCCAACTTTTCTCGAGGCAGCCCGCAGCCAGGGGCTTCAACGGGCGGGCGTaGAACAGTTATTACAGCTGT +
Preference number: 4 (lower is better)
Translates to: PPRRERRQLFSRQPAARGFNGRA*NSYYSC
Trigger: ACAGCTGTAATAACTGTTCCACGCCCGCCCGTTGAA...GCCCCTGGCTGCGGGCTGCCTCGAGAAAAGTTGGCGACGCTCCCGTCGAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338901.4
CDS-3UTR CCA 90 bp ACAACCTGCCCTGGGCAACTTCTCCCTTGCTCGCCTGGTCCCTCCCTGGTCCTGAACAAGCCCACGTTCTaGTCAGCGCACAAGGACCCG +
Preference number: 4 (lower is better)
Translates to: TTCPGQLLPCSPGPSLVLNKPTF*SAHKDP
Trigger: CGGGTCCTTGTGCGCTGACCAGAACGTGGGCTTGTT...CAGGACCAGGGAGGGACCAGGCGAGCAAGGGAGAAGTTGCCCAGGGCAGGTTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338901.4
CDS-3UTR GCA 90 bp AGGCAGCATTACAGTAGCCTAAGGACTTGCTGGCACTGGGCCAGTCTTGTGCTTCCATCGGCTGGGGGCTaGAGGGACCCGTTCCTGCGC +
Preference number: 4 (lower is better)
Translates to: RQHYSSLRTCWHWASLVLPSAGG*RDPFLR
Trigger: GCGCAGGAACGGGTCCCTGCAGCCCCCAGCCGATGG...AAGCACAAGACTGGCCCAGTGCCAGCAAGTCCTTAGGCTACTGTAATGCTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374552.9
ENST00000374553.6
CDS-3UTR GCA 90 bp ATGACGCCAGGTGAAACAGCTCCCACTGAGGGACTGAGACGACTCGTGTGCTTTTCGCTCCCGCGGCGCTaGTGCAGGCAGGAGTTCCCT +
Preference number: 4 (lower is better)
Translates to: MTPGETAPTEGLRRLVCFSLPRR*CRQEFP
Trigger: AGGGAACTCCTGCCTGCAGCAGCGCCGCGGGAGCGA...AAAGCACACGAGTCGTCTCAGTCCCTCAGTGGGAGCTGTTTCACCTGGCGTCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525810.5
ENST00000527388.5
CDS-3UTR GCA 90 bp GCCCACAAATGTCCTCGTCCCATTCTCCATGCAAGCATTGGTCCTCTGGCAAATCAGAGGTGCCAGGGGTaGCCGAGCCGCCAAGGCGGG +
Preference number: 4 (lower is better)
Translates to: AHKCPRPILHASIGPLANQRCQG*PSRQGG
Trigger: CCCGCCTTGGCGGCTCGGGCACCCCTGGCACCTCTG...ATTTGCCAGAGGACCAATGCTTGCATGGAGAATGGGACGAGGACATTTGTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374552.9
ENST00000374553.6
CDS-3UTR GCA 90 bp ATGACGCCAGGTGAAACAGCTCCCACTGAGGGACTGAGACGACTCGTGTGCTTTTTAGGGTGCCAGAGGTaGCAGGGGTGCCCGAGCCGC +
Preference number: 4 (lower is better)
Translates to: MTPGETAPTEGLRRLVCFLGCQR*QGCPSR
Trigger: GCGGCTCGGGCACCCCTGGCACCTCTGGCACCCTAA...AAAGCACACGAGTCGTCTCAGTCCCTCAGTGGGAGCTGTTTCACCTGGCGTCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525810.5
ENST00000527388.5
CDS-3UTR CCA 90 bp CTGTTTACAGCTCCAACTCCAAAGGGGAGCCTGCTGGTTCTGGCATCAGCTCTACTGCGCGACAGTGGCTaGGCGGGACGGAGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: LFTAPTPKGSLLVLASALLRDSG*AGRSRE
Trigger: CTCCCTGCTCCGTCCCGCCCAGCCACTGTCGCGCAG...TAGAGCTGATGCCAGAACCAGCAGGCTCCCCTTTGGAGTTGGAGCTGTAAACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338901.4
CDS-3UTR CCA 90 bp CAGACTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTGGATCTAGCACCCAGAAAGTTCCTGCGCGACAGTaGCTGGGCGGGACGGAGCAG +
Preference number: 4 (lower is better)
Translates to: QTVQGWPSQVWAGSSTQKVPARQ*LGGTEQ
Trigger: CTGCTCCGTCCCGCCCAGCCACTGTCGCGCAGGAAC...TTTCTGGGTGCTAGATCCAGCCCAAACCTGGGAAGGCCAGCCTTGTACAGTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374552.9
ENST00000374553.6
CDS-3UTR CCA 90 bp CTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTGGATCTAGCACCCAGAAACCAGCCTCCGGGTAGCCCATaGCCTCCGGAGACACCCACT +
Preference number: 4 (lower is better)
Translates to: LYKAGLPRFGLDLAPRNQPPGSP*PPETPT
Trigger: AGTGGGTGTCTCCGGAGGCCATGGGCTACCCGGAGG...CTGGTTTCTGGGTGCTAGATCCAGCCCAAACCTGGGAAGGCCAGCCTTGTACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374552.9
ENST00000374553.6
CDS-3UTR CCA 90 bp ATTACAGCTGTTTACAGCTCCAACTCCAAAGGGGAGCCTGCTGGTTCTGGCATCGCTCCCAGGCCCCTGTaGCGGAGGGCCCTCGCCCTA +
Preference number: 4 (lower is better)
Translates to: ITAVYSSNSKGEPAGSGIAPRPL*RRALAL
Trigger: TAGGGCGAGGGCCCTCCGCCACAGGGGCCTGGGAGC...GATGCCAGAACCAGCAGGCTCCCCTTTGGAGTTGGAGCTGTAAACAGCTGTAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338901.4
CDS-3UTR TCA 90 bp GTCAGCGCACAAGGACCCGCGCTGAAAATGCGGTTAAAAGTTGTTTCAACGGGCAGACACCCACTCTCTTaGGGCCCGGGAGCCGCTGCG +
Preference number: 4 (lower is better)
Translates to: VSAQGPALKMRLKVVSTGRHPLS*GPGAAA
Trigger: CGCAGCGGCTCCCGGGCCTCAAGAGAGTGGGTGTCT...GCCCGTTGAAACAACTTTTAACCGCATTTTCAGCGCGGGTCCTTGTGCGCTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338901.4
CDS-3UTR TCA 90 bp CAAACTTCCCAAAGCCCAGCAAGCTGCCACGGTGTGGCTGTCAGCTGGAGTGGGCATGAGCACCTGCGGTaGCAATGCTCTGCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: QTSQSPASCHGVAVSWSGHEHLR*QCSAVA
Trigger: AGCCACAGCAGAGCATTGTCACCGCAGGTGCTCATG...CCCACTCCAGCTGACAGCCACACCGTGGCAGCTTGCTGGGCTTTGGGAAGTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR TCA 90 bp CAAACTTCCCAAAGCCCAGCAAGCTGCCACGGTGTGGCTGTCAGCTGGAGTGGGCATCACGTCTCACCCTaGCCCTTGAAGGGCCAAGCA +
Preference number: 4 (lower is better)
Translates to: QTSQSPASCHGVAVSWSGHHVSP*PLKGQA
Trigger: TGCTTGGCCCTTCAAGGGTCAGGGTGAGACGTGATG...CCCACTCCAGCTGACAGCCACACCGTGGCAGCTTGCTGGGCTTTGGGAAGTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp ATGACGCCAGGTGAAACAGCTCCCACTGAGGGACTGAGACGACTCGTGTGCTTTAGGCGGCTACTGTCCTaGCATCGGCTGGGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: MTPGETAPTEGLRRLVCFRRLLS*HRLGAA
Trigger: TGCAGCCCCCAGCCGATGGCAGGACAGTAGCCGCCT...AAAGCACACGAGTCGTCTCAGTCCCTCAGTGGGAGCTGTTTCACCTGGCGTCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000525810.5
ENST00000527388.5
CDS-3UTR GCA 90 bp ATGACGCCAGGTGAAACAGCTCCCACTGAGGGACTGAGACGACTCGTGTGCTTTGGGAGCCGCTGCGTCTaGCTCAGCCGTTCACGACCT +
Preference number: 4 (lower is better)
Translates to: MTPGETAPTEGLRRLVCFGSRCV*LSRSRP
Trigger: AGGTCGTGAACGGCTGAGGCAGACGCAGCGGCTCCC...AAAGCACACGAGTCGTCTCAGTCCCTCAGTGGGAGCTGTTTCACCTGGCGTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525810.5
ENST00000527388.5
CDS-3UTR GCA 90 bp ATGACGCCAGGTGAAACAGCTCCCACTGAGGGACTGAGACGACTCGTGTGCTTTCGAGGCCACCGAGGCTaGTTAGGGTGCCAGAGGTGC +
Preference number: 4 (lower is better)
Translates to: MTPGETAPTEGLRRLVCFRGHRG*LGCQRC
Trigger: GCACCTCTGGCACCCTAAGCAGCCTCGGTGGCCTCG...AAAGCACACGAGTCGTCTCAGTCCCTCAGTGGGAGCTGTTTCACCTGGCGTCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525810.5
ENST00000527388.5
CDS-3UTR GCA 90 bp CAAACTTCCCAAAGCCCAGCAAGCTGCCACGGTGTGGCTGTCAGCTGGAGTGGGTCTTGCCCGTCTCGATaGTGCGTGTGCACTGCAGGA +
Preference number: 4 (lower is better)
Translates to: QTSQSPASCHGVAVSWSGSCPSR*CVCTAG
Trigger: TCCTGCAGTGCACACGCAGCATCGAGACGGGCAAGA...CCCACTCCAGCTGACAGCCACACCGTGGCAGCTTGCTGGGCTTTGGGAAGTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp CTCACTCCACAGCAGCACTTAGAGGTTCTGGGAGTCCTGGCTCCCAAACCCAGGCAAGCTGCCACGGTGTaGCTGTCAGCTGGAGTGGGA +
Preference number: 4 (lower is better)
Translates to: LTPQQHLEVLGVLAPKPRQAATV*LSAGVG
Trigger: TCCCACTCCAGCTGACAGCCACACCGTGGCAGCTTG...CCTGGGTTTGGGAGCCAGGACTCCCAGAACCTCTAAGTGCTGCTGTGGAGTGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR CAA 72 bp GCCGAGCAGCCTCCGCCAGCTGTCTTTTGTGCCAGCTaGGCTGTTGAAGCCCAAGTAACTGGCAGAGACTCC +
Preference number: 4 (lower is better)
Translates to: AEQPPPAVFCAS*AVEAQVTGRDS
Trigger: GGAGTCTCTGCCAGTTACTTGGGCTTCAACAGCCAAGCTGGCACAAAAGACAGCTGGCGGAGGCTGCTCGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR TCA 90 bp ATGACGCCAGGTGAAACAGCTCCCACTGAGGGACTGAGACGACTCGTGTGCTTTGCCGTTCACGACCTCTaGCAGGCGGCTACTGTCCTG +
Preference number: 4 (lower is better)
Translates to: MTPGETAPTEGLRRLVCFAVHDL*QAATVL
Trigger: CAGGACAGTAGCCGCCTGTCAGAGGTCGTGAACGGC...AAAGCACACGAGTCGTCTCAGTCCCTCAGTGGGAGCTGTTTCACCTGGCGTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525810.5
ENST00000527388.5
CDS-3UTR TCA 90 bp AACATAAAGGCCACAAGTTCTGTGGGTCCCAGAGGCCTGCTGCTCCAACATTGTAGACACCCACTCTCTTaGGGCCCGGGAGCCGCTGCG +
Preference number: 4 (lower is better)
Translates to: NIKATSSVGPRGLLLQHCRHPLS*GPGAAA
Trigger: CGCAGCGGCTCCCGGGCCTCAAGAGAGTGGGTGTCT...ACAATGTTGGAGCAGCAGGCCTCTGGGACCCACAGAACTTGTGGCCTTTATGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374552.9
ENST00000374553.6
CDS-3UTR TCA 90 bp ATGACGCCAGGTGAAACAGCTCCCACTGAGGGACTGAGACGACTCGTGTGCTTTGCCCAAGGTGACTGGTaGTGGGGCTGTCAGGGTCGA +
Preference number: 4 (lower is better)
Translates to: MTPGETAPTEGLRRLVCFAQGDW*WGCQGR
Trigger: TCGACCCTGACAGCCCCATCACCAGTCACCTTGGGC...AAAGCACACGAGTCGTCTCAGTCCCTCAGTGGGAGCTGTTTCACCTGGCGTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525810.5
ENST00000527388.5
CDS-3UTR TCA 90 bp ATGACGCCAGGTGAAACAGCTCCCACTGAGGGACTGAGACGACTCGTGTGCTTTGACGGCTGCCCAAGGTaGCTGGTGATGGGGCTGTCA +
Preference number: 4 (lower is better)
Translates to: MTPGETAPTEGLRRLVCFDGCPR*LVMGLS
Trigger: TGACAGCCCCATCACCAGTCACCTTGGGCAGCCGTC...AAAGCACACGAGTCGTCTCAGTCCCTCAGTGGGAGCTGTTTCACCTGGCGTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525810.5
ENST00000527388.5
CDS-3UTR TCA 90 bp GCCAGCTTGGCTGTTGAAGCCCAAGTAACTGGCAGAGACTCCTGCCATGCCATTCAGCGTGCACCATCTTaGCGGCGATCTTCTGCCGGG +
Preference number: 4 (lower is better)
Translates to: ASLAVEAQVTGRDSCHAIQRAPS*RRSSAG
Trigger: CCCGGCAGAAGATCGCCGTCAAGATGGTGCACGCTG...AATGGCATGGCAGGAGTCTCTGCCAGTTACTTGGGCTTCAACAGCCAAGCTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR TCA 90 bp CAGACTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTGGATCTAGCACCCAGAAACAGCGTGCACCATCTTaGCGGCGATCTTCTGCCGGG +
Preference number: 4 (lower is better)
Translates to: QTVQGWPSQVWAGSSTQKQRAPS*RRSSAG
Trigger: CCCGGCAGAAGATCGCCGTCAAGATGGTGCACGCTG...TTTCTGGGTGCTAGATCCAGCCCAAACCTGGGAAGGCCAGCCTTGTACAGTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp ATGACGCCAGGTGAAACAGCTCCCACTGAGGGACTGAGACGACTCGTGTGCTTTGGGAGCAGCCGCATGTaGAGCTCTACTCCGAGGGGT +
Preference number: 4 (lower is better)
Translates to: MTPGETAPTEGLRRLVCFGSSRM*SSTPRG
Trigger: ACCCCTCGGAGTAGAGCTGCACATGCGGCTGCTCCC...AAAGCACACGAGTCGTCTCAGTCCCTCAGTGGGAGCTGTTTCACCTGGCGTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525810.5
ENST00000527388.5
CDS-3UTR GCA 90 bp TTATTACAGCTGTTTACAGCTCCAACTCCAAAGGGGAGCCTGCTGGTTCTGGCACCATCGGCTGGGGGCTaGAGGGACCCGTTCCTGCGC +
Preference number: 4 (lower is better)
Translates to: LLQLFTAPTPKGSLLVLAPSAGG*RDPFLR
Trigger: GCGCAGGAACGGGTCCCTGCAGCCCCCAGCCGATGG...TGCCAGAACCAGCAGGCTCCCCTTTGGAGTTGGAGCTGTAAACAGCTGTAATAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338901.4
CDS-3UTR GCA 90 bp TTTCAGGAACAAGAGGAGCAGACTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTGGGAGCCGCTGCGTCTaGCTCAGCCGTTCACGACCT +
Preference number: 4 (lower is better)
Translates to: FQEQEEQTVQGWPSQVWAGSRCV*LSRSRP
Trigger: AGGTCGTGAACGGCTGAGGCAGACGCAGCGGCTCCC...AGCCCAAACCTGGGAAGGCCAGCCTTGTACAGTCTGCTCCTCTTGTTCCTGAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374552.9
ENST00000374553.6
CDS-3UTR GCA 90 bp TTATTACAGCTGTTTACAGCTCCAACTCCAAAGGGGAGCCTGCTGGTTCTGGCACTCCCGCGGCGCTGCTaGAGGCAGGAGTTCCCTGCG +
Preference number: 4 (lower is better)
Translates to: LLQLFTAPTPKGSLLVLALPRRC*RQEFPA
Trigger: CGCAGGGAACTCCTGCCTGCAGCAGCGCCGCGGGAG...TGCCAGAACCAGCAGGCTCCCCTTTGGAGTTGGAGCTGTAAACAGCTGTAATAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338901.4
CDS-3UTR GCA 90 bp AACAGGGACCTCGGGGTTGAAGAGTCATGCCATAAGTCAGTCAACATGGAACCACTCCCGCGGCGCTGCTaGAGGCAGGAGTTCCCTGCG +
Preference number: 4 (lower is better)
Translates to: NRDLGVEESCHKSVNMEPLPRRC*RQEFPA
Trigger: CGCAGGGAACTCCTGCCTGCAGCAGCGCCGCGGGAG...TGGTTCCATGTTGACTGACTTATGGCATGACTCTTCAACCCCGAGGTCCCTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374552.9
ENST00000374553.6
CDS-3UTR GCA 90 bp AACATAAAGGCCACAAGTTCTGTGGGTCCCAGAGGCCTGCTGCTCCAACATTGTTCGCTCCCGCGGCGCTaGTGCAGGCAGGAGTTCCCT +
Preference number: 4 (lower is better)
Translates to: NIKATSSVGPRGLLLQHCSLPRR*CRQEFP
Trigger: AGGGAACTCCTGCCTGCAGCAGCGCCGCGGGAGCGA...ACAATGTTGGAGCAGCAGGCCTCTGGGACCCACAGAACTTGTGGCCTTTATGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374552.9
ENST00000374553.6
CDS-3UTR GCA 90 bp GAGACGACTCGTGTGCTTTTAACAGATCTTCAGAGTGAAGGTGCTGAGAGTGGACAGAGGTGCCAGGGGTaGCCGAGCCGCCAAGGCGGG +
Preference number: 4 (lower is better)
Translates to: ETTRVLLTDLQSEGAESGQRCQG*PSRQGG
Trigger: CCCGCCTTGGCGGCTCGGGCACCCCTGGCACCTCTG...TCCACTCTCAGCACCTTCACTCTGAAGATCTGTTAAAAGCACACGAGTCGTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525810.5
ENST00000527388.5
CDS-3UTR GCA 90 bp CTGTTTACAGCTCCAACTCCAAAGGGGAGCCTGCTGGTTCTGGCATCAGCTCTACGAGGCCACCGAGGCTaGTTAGGGTGCCAGAGGTGC +
Preference number: 4 (lower is better)
Translates to: LFTAPTPKGSLLVLASALRGHRG*LGCQRC
Trigger: GCACCTCTGGCACCCTAAGCAGCCTCGGTGGCCTCG...TAGAGCTGATGCCAGAACCAGCAGGCTCCCCTTTGGAGTTGGAGCTGTAAACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338901.4
CDS-3UTR GCA 90 bp CTCACTCCACAGCAGCACTTAGAGGTTCTGGGAGTCCTGGCTCCCAAACCCAGGGGTTCCAATGGCTGCTaGTTAGGTGACGGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: LTPQQHLEVLGVLAPKPRGSNGC*LGDGCP
Trigger: TGGGCAGCCGTCACCTAAGCAGCAGCCATTGGAACC...CCTGGGTTTGGGAGCCAGGACTCCCAGAACCTCTAAGTGCTGCTGTGGAGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374552.9
ENST00000374553.6
CDS-3UTR GCA 90 bp CTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTGGATCTAGCACCCAGAAACCAGTGCCCGTCTCGATGCTaGGTGTGCACTGCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: LYKAGLPRFGLDLAPRNQCPSRC*VCTAGR
Trigger: CCTTCCTGCAGTGCACACGCAGCATCGAGACGGGCA...CTGGTTTCTGGGTGCTAGATCCAGCCCAAACCTGGGAAGGCCAGCCTTGTACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp CTCACTCCACAGCAGCACTTAGAGGTTCTGGGAGTCCTGGCTCCCAAACCCAGGTCTTGCCCGTCTCGATaGTGCGTGTGCACTGCAGGA +
Preference number: 4 (lower is better)
Translates to: LTPQQHLEVLGVLAPKPRSCPSR*CVCTAG
Trigger: TCCTGCAGTGCACACGCAGCATCGAGACGGGCAAGA...CCTGGGTTTGGGAGCCAGGACTCCCAGAACCTCTAAGTGCTGCTGTGGAGTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp CTCACTCCACAGCAGCACTTAGAGGTTCTGGGAGTCCTGGCTCCCAAACCCAGGGTCCCAGAGGCCTGCTaGTCCAACATTGTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: LTPQQHLEVLGVLAPKPRVPEAC*SNIVPG
Trigger: TCCTGGCACAATGTTGGAGCAGCAGGCCTCTGGGAC...CCTGGGTTTGGGAGCCAGGACTCCCAGAACCTCTAAGTGCTGCTGTGGAGTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp CTCACTCCACAGCAGCACTTAGAGGTTCTGGGAGTCCTGGCTCCCAAACCCAGGTGGGTCCCAGAGGCCTaGTGCTCCAACATTGTGCCA +
Preference number: 4 (lower is better)
Translates to: LTPQQHLEVLGVLAPKPRWVPEA*CSNIVP
Trigger: TGGCACAATGTTGGAGCAGCAGGCCTCTGGGACCCA...CCTGGGTTTGGGAGCCAGGACTCCCAGAACCTCTAAGTGCTGCTGTGGAGTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp CTCACTCCACAGCAGCACTTAGAGGTTCTGGGAGTCCTGGCTCCCAAACCCAGGCTGGAGGTTGGTGCTTaGTCACCACTTGGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: LTPQQHLEVLGVLAPKPRLEVGA*SPLGAG
Trigger: ACCTGCCCCAAGTGGTGAGCAAGCACCAACCTCCAG...CCTGGGTTTGGGAGCCAGGACTCCCAGAACCTCTAAGTGCTGCTGTGGAGTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp AATCAGCTTTCTTCTTTGTGCTCACAGGGCCTAGAGGAGCCTCCAGGCAGGGATTGTCCTGCCATCGGCTaGGGGCTGCAGGGACCCGTT +
Preference number: 4 (lower is better)
Translates to: NQLSSLCSQGLEEPPGRDCPAIG*GLQGPV
Trigger: AACGGGTCCCTGCAGCCCCCAGCCGATGGCAGGACA...ATCCCTGCCTGGAGGCTCCTCTAGGCCCTGTGAGCACAAAGAAGAAAGCTGATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374552.9
ENST00000374553.6
CDS-3UTR CCA 90 bp TCCTGCCCTCTAAATTGGCTCGAGGTTGCTGAGTGCTCCCAGGCCCCTGTGGCGTCCTGCCCTCTAAATTaGCTCGAGGTTGCTGAGTGC +
Preference number: 4 (lower is better)
Translates to: SCPLNWLEVAECSQAPVASCPLN*LEVAEC
Trigger: GCACTCAGCAACCTCGAGCCAATTTAGAGGGCAGGA...CGCCACAGGGGCCTGGGAGCACTCAGCAACCTCGAGCCAATTTAGAGGGCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338901.4
CDS-3UTR CCA 90 bp TCCCTTGCTCGCCTGGTCCCTCCCTGGTCCTGCCCTCTAAATTGGCTCGAGGTTGAAGACAACCTGCCCTaGGCAACTTCTCCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: SLARLVPPWSCPLNWLEVEDNLP*ATSPLL
Trigger: GAGCAAGGGAGAAGTTGCCCAGGGCAGGTTGTCTTC...AACCTCGAGCCAATTTAGAGGGCAGGACCAGGGAGGGACCAGGCGAGCAAGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338901.4
CDS-3UTR CCA 90 bp GGGACTTCTGGAGGTCATCCCGTCCAACCCTTCGTCCCCAGACAGAATTTGATTGAGCAGCAGCCCCCTTaGGGTCAGATGTCCACCCCC +
Preference number: 4 (lower is better)
Translates to: GTSGGHPVQPFVPRQNLIEQQPP*GQMSTP
Trigger: GGGGGTGGACATCTGACCCCAAGGGGGCTGCTGCTC...AATCAAATTCTGTCTGGGGACGAAGGGTTGGACGGGATGACCTCCAGAAGTCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp ACTTGCTGGCACTGGGCCAGTCTTGTGCTTTCCAGTCCAGAGGCTAGAGCTGGGGGCTGTCAGCTGGAGTaGGAAGAGCACTCCAACCCT +
Preference number: 4 (lower is better)
Translates to: TCWHWASLVLSSPEARAGGCQLE*EEHSNP
Trigger: AGGGTTGGAGTGCTCTTCCCACTCCAGCTGACAGCC...CCCAGCTCTAGCCTCTGGACTGGAAAGCACAAGACTGGCCCAGTGCCAGCAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp CTCACTCCACAGCAGCACTTAGAGGTTCTGGGAGTCCTGGCTCCCAAACCCAGGTGGCCTTCCCAGGTTTaGGCTGGATCTAGCACCCAG +
Preference number: 4 (lower is better)
Translates to: LTPQQHLEVLGVLAPKPRWPSQV*AGSSTQ
Trigger: CTGGGTGCTAGATCCAGCCCAAACCTGGGAAGGCCA...CCTGGGTTTGGGAGCCAGGACTCCCAGAACCTCTAAGTGCTGCTGTGGAGTGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp CAAACTTCCCAAAGCCCAGCAAGCTGCCACGGTGTGGCTGTCAGCTGGAGTGGGTGCTTGCTCACCACTTaGGGCAGGTCATCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: QTSQSPASCHGVAVSWSGCLLTT*GRSSSL
Trigger: GAGGGAAGATGACCTGCCCCAAGTGGTGAGCAAGCA...CCCACTCCAGCTGACAGCCACACCGTGGCAGCTTGCTGGGCTTTGGGAAGTTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR TCA 90 bp AGGCAGCATTACAGTAGCCTAAGGACTTGCTGGCACTGGGCCAGTCTTGTGCTTGCCGTTCACGACCTCTaGCAGGCGGCTACTGTCCTG +
Preference number: 4 (lower is better)
Translates to: RQHYSSLRTCWHWASLVLAVHDL*QAATVL
Trigger: CAGGACAGTAGCCGCCTGTCAGAGGTCGTGAACGGC...AAGCACAAGACTGGCCCAGTGCCAGCAAGTCCTTAGGCTACTGTAATGCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374552.9
ENST00000374553.6
CDS-3UTR TCA 90 bp GCATCTCTGGGTTTCTCCCCGGAACTCTCAAGGATTTCAGTTCCCAATTACCACAGACACCCACTCTCTTaGGGCCCGGGAGCCGCTGCG +
Preference number: 4 (lower is better)
Translates to: ASLGFSPELSRISVPNYHRHPLS*GPGAAA
Trigger: CGCAGCGGCTCCCGGGCCTCAAGAGAGTGGGTGTCT...GTGGTAATTGGGAACTGAAATCCTTGAGAGTTCCGGGGAGAAACCCAGAGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374552.9
ENST00000374553.6
CDS-3UTR TCA 90 bp ACTTGCTGGCACTGGGCCAGTCTTGTGCTTTCCAGTCCAGAGGCTAGAGCTGGGTTTAGGGGAGCAGCATaGGCACCTGCGGTGACAATG +
Preference number: 4 (lower is better)
Translates to: TCWHWASLVLSSPEARAGFRGAA*APAVTM
Trigger: CATTGTCACCGCAGGTGCTCATGCTGCTCCCCTAAA...CCCAGCTCTAGCCTCTGGACTGGAAAGCACAAGACTGGCCCAGTGCCAGCAAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR TCA 90 bp CAGACTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTGGATCTAGCACCCAGAAAGGCAGGGATGGGTCCTaGGGCAGCATTACAGTAGCC +
Preference number: 4 (lower is better)
Translates to: QTVQGWPSQVWAGSSTQKGRDGS*GSITVA
Trigger: GGCTACTGTAATGCTGCCTCAGGACCCATCCCTGCC...TTTCTGGGTGCTAGATCCAGCCCAAACCTGGGAAGGCCAGCCTTGTACAGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp CCCGCGCTGAAAATGCGGTTAAAAGTTGTTTCAACGGGCGGGCGTGGAACAGTTGGGAGCAGCCGCATGTaGAGCTCTACTCCGAGGGGT +
Preference number: 4 (lower is better)
Translates to: PALKMRLKVVSTGGRGTVGSSRM*SSTPRG
Trigger: ACCCCTCGGAGTAGAGCTGCACATGCGGCTGCTCCC...AACTGTTCCACGCCCGCCCGTTGAAACAACTTTTAACCGCATTTTCAGCGCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000338901.4
CDS-3UTR GCA 90 bp GCTCTGCTGTGGCTTTTTGAAGCCAGAGTGAAGAAAGACTGGGTTAGTACAGCAGCAGGGACCCGTTCCTaGGCGACAGTGGCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: ALLWLFEARVKKDWVSTAAGTRS*ATVAGR
Trigger: CCGCCCAGCCACTGTCGCGCAGGAACGGGTCCCTGC...TGCTGTACTAACCCAGTCTTTCTTCACTCTGGCTTCAAAAAGCCACAGCAGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374552.9
ENST00000374553.6
CDS-3UTR GCA 90 bp ACGACTCGTGTGCTTTTAACAGATCTTCAGAGTGAAGGTGCTGAGAGTGGACAGCCATCGGCTGGGGGCTaGAGGGACCCGTTCCTGCGC +
Preference number: 4 (lower is better)
Translates to: TTRVLLTDLQSEGAESGQPSAGG*RDPFLR
Trigger: GCGCAGGAACGGGTCCCTGCAGCCCCCAGCCGATGG...CTGTCCACTCTCAGCACCTTCACTCTGAAGATCTGTTAAAAGCACACGAGTCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525810.5
ENST00000527388.5
CDS-3UTR GCA 90 bp GAGACGACTCGTGTGCTTTTAACAGATCTTCAGAGTGAAGGTGCTGAGAGTGGACCATCGGCTGGGGGCTaGAGGGACCCGTTCCTGCGC +
Preference number: 4 (lower is better)
Translates to: ETTRVLLTDLQSEGAESGPSAGG*RDPFLR
Trigger: GCGCAGGAACGGGTCCCTGCAGCCCCCAGCCGATGG...TCCACTCTCAGCACCTTCACTCTGAAGATCTGTTAAAAGCACACGAGTCGTCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000525810.5
ENST00000527388.5
CDS-3UTR GCA 90 bp ACGACTCGTGTGCTTTTAACAGATCTTCAGAGTGAAGGTGCTGAGAGTGGACAGCTCCCGCGGCGCTGCTaGAGGCAGGAGTTCCCTGCG +
Preference number: 4 (lower is better)
Translates to: TTRVLLTDLQSEGAESGQLPRRC*RQEFPA
Trigger: CGCAGGGAACTCCTGCCTGCAGCAGCGCCGCGGGAG...CTGTCCACTCTCAGCACCTTCACTCTGAAGATCTGTTAAAAGCACACGAGTCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525810.5
ENST00000527388.5
CDS-3UTR GCA 90 bp CTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTGGATCTAGCACCCAGAAACCAGGGTTCCAATGGCTGCTaGTTAGGTGACGGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: LYKAGLPRFGLDLAPRNQGSNGC*LGDGCP
Trigger: TGGGCAGCCGTCACCTAAGCAGCAGCCATTGGAACC...CTGGTTTCTGGGTGCTAGATCCAGCCCAAACCTGGGAAGGCCAGCCTTGTACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374552.9
ENST00000374553.6
CDS-3UTR GCA 90 bp ATGACGCCAGGTGAAACAGCTCCCACTGAGGGACTGAGACGACTCGTGTGCTTTCCCGGTTCCAATGGCTaGTGCTTAGGTGACGGCTGC +
Preference number: 4 (lower is better)
Translates to: MTPGETAPTEGLRRLVCFPGSNG*CLGDGC
Trigger: GCAGCCGTCACCTAAGCAGCAGCCATTGGAACCGGG...AAAGCACACGAGTCGTCTCAGTCCCTCAGTGGGAGCTGTTTCACCTGGCGTCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525810.5
ENST00000527388.5
CDS-3UTR GCA 90 bp ACTTGCTGGCACTGGGCCAGTCTTGTGCTTTCCAGTCCAGAGGCTAGAGCTGGGTCTCGATGCTGCGTGTaGACTGCAGGAAGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: TCWHWASLVLSSPEARAGSRCCV*TAGRAS
Trigger: AGAAGCCCTTCCTGCAGTGCACACGCAGCATCGAGA...CCCAGCTCTAGCCTCTGGACTGGAAAGCACAAGACTGGCCCAGTGCCAGCAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp CAGACTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTGGATCTAGCACCCAGAAATTGACGGCGATCTTCTaGCGGGCCTTGAGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: QTVQGWPSQVWAGSSTQKLTAIF*RALRRQ
Trigger: CTGCCTCCTCAAGGCCCGGCAGAAGATCGCCGTCAA...TTTCTGGGTGCTAGATCCAGCCCAAACCTGGGAAGGCCAGCCTTGTACAGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp GACTCTTTTTGCCACAGAGCCCCTGGCAGCCGAGAGGACGGGTATTACCATCGAGAGTCTGGAGGTTGGTaGTTGCTCACCACTTGGGGC +
Preference number: 4 (lower is better)
Translates to: DSFCHRAPGSREDGYYHRESGGW*LLTTWG
Trigger: GCCCCAAGTGGTGAGCAAGCACCAACCTCCAGACTC...TCGATGGTAATACCCGTCCTCTCGGCTGCCAGGGGCTCTGTGGCAAAAAGAGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp GAGACGACTCGTGTGCTTTTAACAGATCTTCAGAGTGAAGGTGCTGAGAGTGGACTGCGCGACAGTGGCTaGGCGGGACGGAGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: ETTRVLLTDLQSEGAESGLRDSG*AGRSRE
Trigger: CTCCCTGCTCCGTCCCGCCCAGCCACTGTCGCGCAG...TCCACTCTCAGCACCTTCACTCTGAAGATCTGTTAAAAGCACACGAGTCGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525810.5
ENST00000527388.5
CDS-3UTR CCA 90 bp CAGACTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTGGATCTAGCACCCAGAAAAATCCCTGGAATTCCTaGGGGTCCCTGGGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: QTVQGWPSQVWAGSSTQKNPWNS*GSLGSW
Trigger: CCAGGACCCCAGGGACCCCCAGGAATTCCAGGGATT...TTTCTGGGTGCTAGATCCAGCCCAAACCTGGGAAGGCCAGCCTTGTACAGTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp ACTTGCTGGCACTGGGCCAGTCTTGTGCTTTCCAGTCCAGAGGCTAGAGCTGGGCAGACTGTACAAGGCTaGCCTTCCCAGGTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: TCWHWASLVLSSPEARAGQTVQG*PSQVWA
Trigger: AGCCCAAACCTGGGAAGGCCAGCCTTGTACAGTCTG...CCCAGCTCTAGCCTCTGGACTGGAAAGCACAAGACTGGCCCAGTGCCAGCAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp CTCACTCCACAGCAGCACTTAGAGGTTCTGGGAGTCCTGGCTCCCAAACCCAGGAGGACTTGCTGGCACTaGGCCAGTCTTGTGCTTTCC +
Preference number: 4 (lower is better)
Translates to: LTPQQHLEVLGVLAPKPRRTCWH*ASLVLS
Trigger: GGAAAGCACAAGACTGGCCCAGTGCCAGCAAGTCCT...CCTGGGTTTGGGAGCCAGGACTCCCAGAACCTCTAAGTGCTGCTGTGGAGTGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR TCA 90 bp GAGACGACTCGTGTGCTTTTAACAGATCTTCAGAGTGAAGGTGCTGAGAGTGGAAGACACCCACTCTCTTaGGGCCCGGGAGCCGCTGCG +
Preference number: 4 (lower is better)
Translates to: ETTRVLLTDLQSEGAESGRHPLS*GPGAAA
Trigger: CGCAGCGGCTCCCGGGCCTCAAGAGAGTGGGTGTCT...TCCACTCTCAGCACCTTCACTCTGAAGATCTGTTAAAAGCACACGAGTCGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525810.5
ENST00000527388.5
CDS-3UTR TCA 90 bp GCCCACAAATGTCCTCGTCCCATTCTCCATGCAAGCATTGGTCCTCTGGCAAATGACGGCTGCCCAAGGTaGCTGGTGATGGGGCTGTCA +
Preference number: 4 (lower is better)
Translates to: AHKCPRPILHASIGPLANDGCPR*LVMGLS
Trigger: TGACAGCCCCATCACCAGTCACCTTGGGCAGCCGTC...ATTTGCCAGAGGACCAATGCTTGCATGGAGAATGGGACGAGGACATTTGTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374552.9
ENST00000374553.6
CDS-3UTR TCA 90 bp CTGCTCCAACATTGTGCCAGGAAGATTCTTCTGAACACAAGAGCTCTAAGGCTGTCTTCTGCCGGGCCTTaGGGAGGCAGACGCCTGCGG +
Preference number: 4 (lower is better)
Translates to: LLQHCARKILLNTRALRLSSAGP*GGRRLR
Trigger: CCGCAGGCGTCTGCCTCCTCAAGGCCCGGCAGAAGA...CAGCCTTAGAGCTCTTGTGTTCAGAAGAATCTTCCTGGCACAATGTTGGAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR TCA 90 bp CTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTGGATCTAGCACCCAGAAACCAGTTTAGGGGAGCAGCATaGGCACCTGCGGTGACAATG +
Preference number: 4 (lower is better)
Translates to: LYKAGLPRFGLDLAPRNQFRGAA*APAVTM
Trigger: CATTGTCACCGCAGGTGCTCATGCTGCTCCCCTAAA...CTGGTTTCTGGGTGCTAGATCCAGCCCAAACCTGGGAAGGCCAGCCTTGTACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR TCA 90 bp ACTTGCTGGCACTGGGCCAGTCTTGTGCTTTCCAGTCCAGAGGCTAGAGCTGGGGAGGGTCCTACCATATaGTCTGTTGGGAAGCTTGGG +
Preference number: 4 (lower is better)
Translates to: TCWHWASLVLSSPEARAGEGPTI*SVGKLG
Trigger: CCCAAGCTTCCCAACAGATCATATGGTAGGACCCTC...CCCAGCTCTAGCCTCTGGACTGGAAAGCACAAGACTGGCCCAGTGCCAGCAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR TCA 90 bp CCAGCTGTCTTTTGTGCCAGCTTGGCTGTTGAAGCCCAAGTAACTGGCAGAGACGGCAGGGATGGGTCCTaGGGCAGCATTACAGTAGCC +
Preference number: 4 (lower is better)
Translates to: PAVFCASLAVEAQVTGRDGRDGS*GSITVA
Trigger: GGCTACTGTAATGCTGCCTCAGGACCCATCCCTGCC...GTCTCTGCCAGTTACTTGGGCTTCAACAGCCAAGCTGGCACAAAAGACAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR TCA 90 bp CTCACTCCACAGCAGCACTTAGAGGTTCTGGGAGTCCTGGCTCCCAAACCCAGGTCTCACACTGGATGCTaGCCCCCAAAAGCAGCATTG +
Preference number: 4 (lower is better)
Translates to: LTPQQHLEVLGVLAPKPRSHTGC*PPKAAL
Trigger: CAATGCTGCTTTTGGGGGTCAGCATCCAGTGTGAGA...CCTGGGTTTGGGAGCCAGGACTCCCAGAACCTCTAAGTGCTGCTGTGGAGTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp AACATAAAGGCCACAAGTTCTGTGGGTCCCAGAGGCCTGCTGCTCCAACATTGTGGGAGCAGCCGCATGTaGAGCTCTACTCCGAGGGGT +
Preference number: 4 (lower is better)
Translates to: NIKATSSVGPRGLLLQHCGSSRM*SSTPRG
Trigger: ACCCCTCGGAGTAGAGCTGCACATGCGGCTGCTCCC...ACAATGTTGGAGCAGCAGGCCTCTGGGACCCACAGAACTTGTGGCCTTTATGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374552.9
ENST00000374553.6
CDS-3UTR GCA 90 bp AACAGGGACCTCGGGGTTGAAGAGTCATGCCATAAGTCAGTCAACATGGAACCAAGGCGGCTACTGTCCTaGCATCGGCTGGGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: NRDLGVEESCHKSVNMEPRRLLS*HRLGAA
Trigger: TGCAGCCCCCAGCCGATGGCAGGACAGTAGCCGCCT...TGGTTCCATGTTGACTGACTTATGGCATGACTCTTCAACCCCGAGGTCCCTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374552.9
ENST00000374553.6
CDS-3UTR GCA 90 bp AACAGGGACCTCGGGGTTGAAGAGTCATGCCATAAGTCAGTCAACATGGAACCAGGGAGCCGCTGCGTCTaGCTCAGCCGTTCACGACCT +
Preference number: 4 (lower is better)
Translates to: NRDLGVEESCHKSVNMEPGSRCV*LSRSRP
Trigger: AGGTCGTGAACGGCTGAGGCAGACGCAGCGGCTCCC...TGGTTCCATGTTGACTGACTTATGGCATGACTCTTCAACCCCGAGGTCCCTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374552.9
ENST00000374553.6
CDS-3UTR GCA 90 bp GAGACGACTCGTGTGCTTTTAACAGATCTTCAGAGTGAAGGTGCTGAGAGTGGAAGGCCCGGGAGCCGCTaGGTCTGCCTCAGCCGTTCA +
Preference number: 4 (lower is better)
Translates to: ETTRVLLTDLQSEGAESGRPGSR*VCLSRS
Trigger: TGAACGGCTGAGGCAGACGCAGCGGCTCCCGGGCCT...TCCACTCTCAGCACCTTCACTCTGAAGATCTGTTAAAAGCACACGAGTCGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525810.5
ENST00000527388.5
CDS-3UTR GCA 90 bp ACGACTCGTGTGCTTTTAACAGATCTTCAGAGTGAAGGTGCTGAGAGTGGACAGAGGCCCGGGAGCCGCTaGGTCTGCCTCAGCCGTTCA +
Preference number: 4 (lower is better)
Translates to: TTRVLLTDLQSEGAESGQRPGSR*VCLSRS
Trigger: TGAACGGCTGAGGCAGACGCAGCGGCTCCCGGGCCT...CTGTCCACTCTCAGCACCTTCACTCTGAAGATCTGTTAAAAGCACACGAGTCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525810.5
ENST00000527388.5
CDS-3UTR GCA 90 bp ACGACTCGTGTGCTTTTAACAGATCTTCAGAGTGAAGGTGCTGAGAGTGGACAGTCGCTCCCGCGGCGCTaGTGCAGGCAGGAGTTCCCT +
Preference number: 4 (lower is better)
Translates to: TTRVLLTDLQSEGAESGQSLPRR*CRQEFP
Trigger: AGGGAACTCCTGCCTGCAGCAGCGCCGCGGGAGCGA...CTGTCCACTCTCAGCACCTTCACTCTGAAGATCTGTTAAAAGCACACGAGTCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525810.5
ENST00000527388.5
CDS-3UTR GCA 90 bp CTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTGGATCTAGCACCCAGAAACCAGCCTTGGCCCTGTAGATaGACCACAGCTGGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: LYKAGLPRFGLDLAPRNQPWPCR*TTAGWF
Trigger: AAACCAGCCAGCTGTGGTGCATCTACAGGGCCAAGG...CTGGTTTCTGGGTGCTAGATCCAGCCCAAACCTGGGAAGGCCAGCCTTGTACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp CAAACTTCCCAAAGCCCAGCAAGCTGCCACGGTGTGGCTGTCAGCTGGAGTGGGACTGGGGCATTTCTCTaGGGCTGCAACACCAATACA +
Preference number: 4 (lower is better)
Translates to: QTSQSPASCHGVAVSWSGTGAFL*GCNTNT
Trigger: TGTATTGGTGTTGCAGCCGCAGAGAAATGCCCCAGT...CCCACTCCAGCTGACAGCCACACCGTGGCAGCTTGCTGGGCTTTGGGAAGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp AATCAGCTTTCTTCTTTGTGCTCACAGGGCCTAGAGGAGCCTCCAGGCAGGGATCAAAGCCCAGCAAGCTaGCACGGTGTGGCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: NQLSSLCSQGLEEPPGRDQSPAS*HGVAVS
Trigger: GCTGACAGCCACACCGTGGCAGCTTGCTGGGCTTTG...ATCCCTGCCTGGAGGCTCCTCTAGGCCCTGTGAGCACAAAGAAGAAAGCTGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp TTTCAGGAACAAGAGGAGCAGACTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTCAAAGCCCAGCAAGCTaGCACGGTGTGGCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: FQEQEEQTVQGWPSQVWAQSPAS*HGVAVS
Trigger: GCTGACAGCCACACCGTGGCAGCTTGCTGGGCTTTG...AGCCCAAACCTGGGAAGGCCAGCCTTGTACAGTCTGCTCCTCTTGTTCCTGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp CCAGCTGTCTTTTGTGCCAGCTTGGCTGTTGAAGCCCAAGTAACTGGCAGAGACCAAAGCCCAGCAAGCTaGCACGGTGTGGCTGTCAGC +
Preference number: 4 (lower is better)
Translates to: PAVFCASLAVEAQVTGRDQSPAS*HGVAVS
Trigger: GCTGACAGCCACACCGTGGCAGCTTGCTGGGCTTTG...GTCTCTGCCAGTTACTTGGGCTTCAACAGCCAAGCTGGCACAAAAGACAGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp ACTTGCTGGCACTGGGCCAGTCTTGTGCTTTCCAGTCCAGAGGCTAGAGCTGGGGGTTTCTGCTACAACTaGGGACTGTCCGAGGCACTT +
Preference number: 4 (lower is better)
Translates to: TCWHWASLVLSSPEARAGGFCYN*GLSEAL
Trigger: AAGTGCCTCGGACAGTCCGCAGTTGTAGCAGAAACC...CCCAGCTCTAGCCTCTGGACTGGAAAGCACAAGACTGGCCCAGTGCCAGCAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp CAGACTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTGGATCTAGCACCCAGAAAGTCCCAGAGGCCTGCTaGTCCAACATTGTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: QTVQGWPSQVWAGSSTQKVPEAC*SNIVPG
Trigger: TCCTGGCACAATGTTGGAGCAGCAGGCCTCTGGGAC...TTTCTGGGTGCTAGATCCAGCCCAAACCTGGGAAGGCCAGCCTTGTACAGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp CAGACTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTGGATCTAGCACCCAGAAATGGGTCCCAGAGGCCTaGTGCTCCAACATTGTGCCA +
Preference number: 4 (lower is better)
Translates to: QTVQGWPSQVWAGSSTQKWVPEA*CSNIVP
Trigger: TGGCACAATGTTGGAGCAGCAGGCCTCTGGGACCCA...TTTCTGGGTGCTAGATCCAGCCCAAACCTGGGAAGGCCAGCCTTGTACAGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp ACTTGCTGGCACTGGGCCAGTCTTGTGCTTTCCAGTCCAGAGGCTAGAGCTGGGCCTCTGTCATCTGCTTaGCCACAAATGTCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: TCWHWASLVLSSPEARAGPLSSA*PQMSSS
Trigger: GGACGAGGACATTTGTGGGCAAGCAGATGACAGAGG...CCCAGCTCTAGCCTCTGGACTGGAAAGCACAAGACTGGCCCAGTGCCAGCAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp CAAACTTCCCAAAGCCCAGCAAGCTGCCACGGTGTGGCTGTCAGCTGGAGTGGGCAGAGACTCCTGCCATaGCATTCTCCTTCAAACCTC +
Preference number: 4 (lower is better)
Translates to: QTSQSPASCHGVAVSWSGQRLLP*HSPSNL
Trigger: GAGGTTTGAAGGAGAATGGCATGGCAGGAGTCTCTG...CCCACTCCAGCTGACAGCCACACCGTGGCAGCTTGCTGGGCTTTGGGAAGTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp GCCAGCTTGGCTGTTGAAGCCCAAGTAACTGGCAGAGACTCCTGCCATGCCATTGAGTCTGGAGGTTGGTaGTTGCTCACCACTTGGGGC +
Preference number: 4 (lower is better)
Translates to: ASLAVEAQVTGRDSCHAIESGGW*LLTTWG
Trigger: GCCCCAAGTGGTGAGCAAGCACCAACCTCCAGACTC...AATGGCATGGCAGGAGTCTCTGCCAGTTACTTGGGCTTCAACAGCCAAGCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp ACGACTCGTGTGCTTTTAACAGATCTTCAGAGTGAAGGTGCTGAGAGTGGACAGGTTCCTGCGCGACAGTaGCTGGGCGGGACGGAGCAG +
Preference number: 4 (lower is better)
Translates to: TTRVLLTDLQSEGAESGQVPARQ*LGGTEQ
Trigger: CTGCTCCGTCCCGCCCAGCCACTGTCGCGCAGGAAC...CTGTCCACTCTCAGCACCTTCACTCTGAAGATCTGTTAAAAGCACACGAGTCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525810.5
ENST00000527388.5
CDS-3UTR CCA 90 bp AAGCTAAAGAATATCCCAGACTCACATGACCACAGGTCCCAGGTTAGGCACCTGTGTCCTGCCATCGGCTaGGGGCTGCAGGGACCCGTT +
Preference number: 4 (lower is better)
Translates to: KLKNIPDSHDHRSQVRHLCPAIG*GLQGPV
Trigger: AACGGGTCCCTGCAGCCCCCAGCCGATGGCAGGACA...CAGGTGCCTAACCTGGGACCTGTGGTCATGTGAGTCTGGGATATTCTTTAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374552.9
ENST00000374553.6
CDS-3UTR CCA 90 bp CTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTGGATCTAGCACCCAGAAACCAGTTCAATAGGGCCATCTaGTGCCCGTCCTGGGAGTCA +
Preference number: 4 (lower is better)
Translates to: LYKAGLPRFGLDLAPRNQFNRAI*CPSWES
Trigger: TGACTCCCAGGACGGGCACCAGATGGCCCTATTGAA...CTGGTTTCTGGGTGCTAGATCCAGCCCAAACCTGGGAAGGCCAGCCTTGTACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374552.9
ENST00000374553.6
CDS-3UTR CCA 90 bp CTCACTCCACAGCAGCACTTAGAGGTTCTGGGAGTCCTGGCTCCCAAACCCAGGACCTGGAGGACCAGGTaGTCCCATAACAGTTGTTCC +
Preference number: 4 (lower is better)
Translates to: LTPQQHLEVLGVLAPKPRTWRTR*SHNSCS
Trigger: GGAACAACTGTTATGGGACCACCTGGTCCTCCAGGT...CCTGGGTTTGGGAGCCAGGACTCCCAGAACCTCTAAGTGCTGCTGTGGAGTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp CAAACTTCCCAAAGCCCAGCAAGCTGCCACGGTGTGGCTGTCAGCTGGAGTGGGTCTGGCCTGCTGCCCTaGATCCTCATTTTAGTGCAA +
Preference number: 4 (lower is better)
Translates to: QTSQSPASCHGVAVSWSGSGLLP*ILILVQ
Trigger: TTGCACTAAAATGAGGATCCAGGGCAGCAGGCCAGA...CCCACTCCAGCTGACAGCCACACCGTGGCAGCTTGCTGGGCTTTGGGAAGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp CAAACTTCCCAAAGCCCAGCAAGCTGCCACGGTGTGGCTGTCAGCTGGAGTGGGGGCCTAACGTCCACTTaGGTTGCAGCAAACTTGAAC +
Preference number: 4 (lower is better)
Translates to: QTSQSPASCHGVAVSWSGGLTST*VAANLN
Trigger: GTTCAAGTTTGCTGCAACCCAAGTGGACGTTAGGCC...CCCACTCCAGCTGACAGCCACACCGTGGCAGCTTGCTGGGCTTTGGGAAGTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp CAGACTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTGGATCTAGCACCCAGAAATGGCCTTCCCAGGTTTaGGCTGGATCTAGCACCCAG +
Preference number: 4 (lower is better)
Translates to: QTVQGWPSQVWAGSSTQKWPSQV*AGSSTQ
Trigger: CTGGGTGCTAGATCCAGCCCAAACCTGGGAAGGCCA...TTTCTGGGTGCTAGATCCAGCCCAAACCTGGGAAGGCCAGCCTTGTACAGTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp GACTCTTTTTGCCACAGAGCCCCTGGCAGCCGAGAGGACGGGTATTACCATCGAAGGACTTGCTGGCACTaGGCCAGTCTTGTGCTTTCC +
Preference number: 4 (lower is better)
Translates to: DSFCHRAPGSREDGYYHRRTCWH*ASLVLS
Trigger: GGAAAGCACAAGACTGGCCCAGTGCCAGCAAGTCCT...TCGATGGTAATACCCGTCCTCTCGGCTGCCAGGGGCTCTGTGGCAAAAAGAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR CAA 72 bp TTACCCCCTCACTCTGCTGAGTCTGGAGGTTGGTGCTaGCTCACCACTTGGGGCAGGTCATCTTCCCTCTCT +
Preference number: 4 (lower is better)
Translates to: LPPHSAESGGWC*LTTWGRSSSLS
Trigger: AGAGAGGGAAGATGACCTGCCCCAAGTGGTGAGCAAGCACCAACCTCCAGACTCAGCAGAGTGAGGGGGTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR TCA 90 bp TTATTACAGCTGTTTACAGCTCCAACTCCAAAGGGGAGCCTGCTGGTTCTGGCAGCCCAAGGTGACTGGTaGTGGGGCTGTCAGGGTCGA +
Preference number: 4 (lower is better)
Translates to: LLQLFTAPTPKGSLLVLAAQGDW*WGCQGR
Trigger: TCGACCCTGACAGCCCCATCACCAGTCACCTTGGGC...TGCCAGAACCAGCAGGCTCCCCTTTGGAGTTGGAGCTGTAAACAGCTGTAATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338901.4
CDS-3UTR TCA 90 bp CTCACTCCACAGCAGCACTTAGAGGTTCTGGGAGTCCTGGCTCCCAAACCCAGGTTTAGAAGGCTGTGGTaGGGGCTAAGAGTCACAGGT +
Preference number: 4 (lower is better)
Translates to: LTPQQHLEVLGVLAPKPRFRRLW*GLRVTG
Trigger: ACCTGTGACTCTTAGCCCTCACCACAGCCTTCTAAA...CCTGGGTTTGGGAGCCAGGACTCCCAGAACCTCTAAGTGCTGCTGTGGAGTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR TCA 90 bp AATCAGCTTTCTTCTTTGTGCTCACAGGGCCTAGAGGAGCCTCCAGGCAGGGATCATCACGTCTCACCCTaGCCCTTGAAGGGCCAAGCA +
Preference number: 4 (lower is better)
Translates to: NQLSSLCSQGLEEPPGRDHHVSP*PLKGQA
Trigger: TGCTTGGCCCTTCAAGGGTCAGGGTGAGACGTGATG...ATCCCTGCCTGGAGGCTCCTCTAGGCCCTGTGAGCACAAAGAAGAAAGCTGATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR TCA 90 bp CAGACTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTGGATCTAGCACCCAGAAATGCCAGCTTGGCTGTTaGAGCCCAAGTAACTGGCAG +
Preference number: 4 (lower is better)
Translates to: QTVQGWPSQVWAGSSTQKCQLGC*SPSNWQ
Trigger: CTGCCAGTTACTTGGGCTTCAACAGCCAAGCTGGCA...TTTCTGGGTGCTAGATCCAGCCCAAACCTGGGAAGGCCAGCCTTGTACAGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR TCA 90 bp GCTCTGCTGTGGCTTTTTGAAGCCAGAGTGAAGAAAGACTGGGTTAGTACAGCAGCCTGGCCAGGCTCCTaGAGGGGGCCAAGTACTTCC +
Preference number: 4 (lower is better)
Translates to: ALLWLFEARVKKDWVSTAAWPGS*RGPSTS
Trigger: GGAAGTACTTGGCCCCCTTCAGGAGCCTGGCCAGGC...TGCTGTACTAACCCAGTCTTTCTTCACTCTGGCTTCAAAAAGCCACAGCAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR TCA 90 bp GCCCACAAATGTCCTCGTCCCATTCTCCATGCAAGCATTGGTCCTCTGGCAAATGGCAGGGATGGGTCCTaGGGCAGCATTACAGTAGCC +
Preference number: 4 (lower is better)
Translates to: AHKCPRPILHASIGPLANGRDGS*GSITVA
Trigger: GGCTACTGTAATGCTGCCTCAGGACCCATCCCTGCC...ATTTGCCAGAGGACCAATGCTTGCATGGAGAATGGGACGAGGACATTTGTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR TCA 90 bp CTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTGGATCTAGCACCCAGAAACCAGTCTCACACTGGATGCTaGCCCCCAAAAGCAGCATTG +
Preference number: 4 (lower is better)
Translates to: LYKAGLPRFGLDLAPRNQSHTGC*PPKAAL
Trigger: CAATGCTGCTTTTGGGGGTCAGCATCCAGTGTGAGA...CTGGTTTCTGGGTGCTAGATCCAGCCCAAACCTGGGAAGGCCAGCCTTGTACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp AACAGGGACCTCGGGGTTGAAGAGTCATGCCATAAGTCAGTCAACATGGAACCAGGGAGCAGCCGCATGTaGAGCTCTACTCCGAGGGGT +
Preference number: 4 (lower is better)
Translates to: NRDLGVEESCHKSVNMEPGSSRM*SSTPRG
Trigger: ACCCCTCGGAGTAGAGCTGCACATGCGGCTGCTCCC...TGGTTCCATGTTGACTGACTTATGGCATGACTCTTCAACCCCGAGGTCCCTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374552.9
ENST00000374553.6
CDS-3UTR GCA 90 bp CTGAGAGACCCTGGTAGTATCAAAGTCTCTAAGGTATGGTGGAAAGAGATAAGGGCAGGGACCCGTTCCTaGGCGACAGTGGCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: LRDPGSIKVSKVWWKEIRAGTRS*ATVAGR
Trigger: CCGCCCAGCCACTGTCGCGCAGGAACGGGTCCCTGC...CCTTATCTCTTTCCACCATACCTTAGAGACTTTGATACTACCAGGGTCTCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374552.9
ENST00000374553.6
CDS-3UTR GCA 90 bp GCTCTGCTGTGGCTTTTTGAAGCCAGAGTGAAGAAAGACTGGGTTAGTACAGCAAGGCGGCTACTGTCCTaGCATCGGCTGGGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: ALLWLFEARVKKDWVSTARRLLS*HRLGAA
Trigger: TGCAGCCCCCAGCCGATGGCAGGACAGTAGCCGCCT...TGCTGTACTAACCCAGTCTTTCTTCACTCTGGCTTCAAAAAGCCACAGCAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000374552.9
ENST00000374553.6
CDS-3UTR GCA 90 bp GGGTCCTACCATATGATCTGTTGGGAAGCTTGGGGTTTAGGGGAAGGTGAATTTCGAGGCCACCGAGGCTaGTTAGGGTGCCAGAGGTGC +
Preference number: 4 (lower is better)
Translates to: GSYHMICWEAWGLGEGEFRGHRG*LGCQRC
Trigger: GCACCTCTGGCACCCTAAGCAGCCTCGGTGGCCTCG...AAATTCACCTTCCCCTAAACCCCAAGCTTCCCAACAGATCATATGGTAGGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374552.9
ENST00000374553.6
CDS-3UTR GCA 90 bp CTGCTCCAACATTGTGCCAGGAAGATTCTTCTGAACACAAGAGCTCTAAGGCTGCGAGGCCACCGAGGCTaGTTAGGGTGCCAGAGGTGC +
Preference number: 4 (lower is better)
Translates to: LLQHCARKILLNTRALRLRGHRG*LGCQRC
Trigger: GCACCTCTGGCACCCTAAGCAGCCTCGGTGGCCTCG...CAGCCTTAGAGCTCTTGTGTTCAGAAGAATCTTCCTGGCACAATGTTGGAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374552.9
ENST00000374553.6
CDS-3UTR GCA 90 bp GAGACGACTCGTGTGCTTTTAACAGATCTTCAGAGTGAAGGTGCTGAGAGTGGACGAGGCCACCGAGGCTaGTTAGGGTGCCAGAGGTGC +
Preference number: 4 (lower is better)
Translates to: ETTRVLLTDLQSEGAESGRGHRG*LGCQRC
Trigger: GCACCTCTGGCACCCTAAGCAGCCTCGGTGGCCTCG...TCCACTCTCAGCACCTTCACTCTGAAGATCTGTTAAAAGCACACGAGTCGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525810.5
ENST00000527388.5
CDS-3UTR GCA 90 bp CCCGCGCTGAAAATGCGGTTAAAAGTTGTTTCAACGGGCGGGCGTGGAACAGTTGTCCCTCCCTGGTCCTaGCCTCTAAATTGGCTCGAG +
Preference number: 4 (lower is better)
Translates to: PALKMRLKVVSTGGRGTVVPPWS*PLNWLE
Trigger: CTCGAGCCAATTTAGAGGGCAGGACCAGGGAGGGAC...AACTGTTCCACGCCCGCCCGTTGAAACAACTTTTAACCGCATTTTCAGCGCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338901.4
CDS-3UTR GCA 90 bp GGGACTTCTGGAGGTCATCCCGTCCAACCCTTCGTCCCCAGACAGAATTTGATTAATAGGGCCATCTGGTaGCCGTCCTGGGAGTCAGAG +
Preference number: 4 (lower is better)
Translates to: GTSGGHPVQPFVPRQNLINRAIW*PSWESE
Trigger: CTCTGACTCCCAGGACGGGCACCAGATGGCCCTATT...AATCAAATTCTGTCTGGGGACGAAGGGTTGGACGGGATGACCTCCAGAAGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374552.9
ENST00000374553.6
CDS-3UTR GCA 90 bp AGGCAGCATTACAGTAGCCTAAGGACTTGCTGGCACTGGGCCAGTCTTGTGCTTAATAGGGCCATCTGGTaGCCGTCCTGGGAGTCAGAG +
Preference number: 4 (lower is better)
Translates to: RQHYSSLRTCWHWASLVLNRAIW*PSWESE
Trigger: CTCTGACTCCCAGGACGGGCACCAGATGGCCCTATT...AAGCACAAGACTGGCCCAGTGCCAGCAAGTCCTTAGGCTACTGTAATGCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374552.9
ENST00000374553.6
CDS-3UTR GCA 90 bp GCCAGCTTGGCTGTTGAAGCCCAAGTAACTGGCAGAGACTCCTGCCATGCCATTCCTTGGCCCTGTAGATaGACCACAGCTGGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: ASLAVEAQVTGRDSCHAIPWPCR*TTAGWF
Trigger: AAACCAGCCAGCTGTGGTGCATCTACAGGGCCAAGG...AATGGCATGGCAGGAGTCTCTGCCAGTTACTTGGGCTTCAACAGCCAAGCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp GCCCACAAATGTCCTCGTCCCATTCTCCATGCAAGCATTGGTCCTCTGGCAAATTGCCCGTCTCGATGCTaGGTGTGCACTGCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: AHKCPRPILHASIGPLANCPSRC*VCTAGR
Trigger: CCTTCCTGCAGTGCACACGCAGCATCGAGACGGGCA...ATTTGCCAGAGGACCAATGCTTGCATGGAGAATGGGACGAGGACATTTGTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp GCCCACAAATGTCCTCGTCCCATTCTCCATGCAAGCATTGGTCCTCTGGCAAATTTGACGGCGATCTTCTaGCGGGCCTTGAGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: AHKCPRPILHASIGPLANLTAIF*RALRRQ
Trigger: CTGCCTCCTCAAGGCCCGGCAGAAGATCGCCGTCAA...ATTTGCCAGAGGACCAATGCTTGCATGGAGAATGGGACGAGGACATTTGTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp GCCAGCTTGGCTGTTGAAGCCCAAGTAACTGGCAGAGACTCCTGCCATGCCATTGCACTCCAACCCTCCTaGAGGCCACAGTATAGAGCA +
Preference number: 4 (lower is better)
Translates to: ASLAVEAQVTGRDSCHAIALQPS*RPQYRA
Trigger: TGCTCTATACTGTGGCCTGCAGGAGGGTTGGAGTGC...AATGGCATGGCAGGAGTCTCTGCCAGTTACTTGGGCTTCAACAGCCAAGCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp GCCAGCTTGGCTGTTGAAGCCCAAGTAACTGGCAGAGACTCCTGCCATGCCATTAGCAGCATGAGCACCTaGGGTGACAATGCTCTGCTG +
Preference number: 4 (lower is better)
Translates to: ASLAVEAQVTGRDSCHAISSMST*GDNALL
Trigger: CAGCAGAGCATTGTCACCGCAGGTGCTCATGCTGCT...AATGGCATGGCAGGAGTCTCTGCCAGTTACTTGGGCTTCAACAGCCAAGCTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp CTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTGGATCTAGCACCCAGAAACCAGTTAGGGCCAGACACATaGCTGGAGTTCACCTCACCT +
Preference number: 4 (lower is better)
Translates to: LYKAGLPRFGLDLAPRNQLGPDT*LEFTSP
Trigger: AGGTGAGGTGAACTCCAGGCATGTGTCTGGCCCTAA...CTGGTTTCTGGGTGCTAGATCCAGCCCAAACCTGGGAAGGCCAGCCTTGTACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp GACTCTTTTTGCCACAGAGCCCCTGGCAGCCGAGAGGACGGGTATTACCATCGATTAGGGCCAGACACATaGCTGGAGTTCACCTCACCT +
Preference number: 4 (lower is better)
Translates to: DSFCHRAPGSREDGYYHRLGPDT*LEFTSP
Trigger: AGGTGAGGTGAACTCCAGGCATGTGTCTGGCCCTAA...TCGATGGTAATACCCGTCCTCTCGGCTGCCAGGGGCTCTGTGGCAAAAAGAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp TTTCAGGAACAAGAGGAGCAGACTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTGTCCCAGAGGCCTGCTaGTCCAACATTGTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: FQEQEEQTVQGWPSQVWAVPEAC*SNIVPG
Trigger: TCCTGGCACAATGTTGGAGCAGCAGGCCTCTGGGAC...AGCCCAAACCTGGGAAGGCCAGCCTTGTACAGTCTGCTCCTCTTGTTCCTGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp CTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTGGATCTAGCACCCAGAAACCAGTCCCCAGCTACCTATTaGTTCCCTCATCATCCCTCG +
Preference number: 4 (lower is better)
Translates to: LYKAGLPRFGLDLAPRNQSPATY*FPHHPS
Trigger: CGAGGGATGATGAGGGAAGCAATAGGTAGCTGGGGA...CTGGTTTCTGGGTGCTAGATCCAGCCCAAACCTGGGAAGGCCAGCCTTGTACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp CTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTGGATCTAGCACCCAGAAACCAGCCTCTGTCATCTGCTTaGCCACAAATGTCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: LYKAGLPRFGLDLAPRNQPLSSA*PQMSSS
Trigger: GGACGAGGACATTTGTGGGCAAGCAGATGACAGAGG...CTGGTTTCTGGGTGCTAGATCCAGCCCAAACCTGGGAAGGCCAGCCTTGTACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp CTCACTCCACAGCAGCACTTAGAGGTTCTGGGAGTCCTGGCTCCCAAACCCAGGACTGGCAGAGACTCCTaGCATGCCATTCTCCTTCAA +
Preference number: 4 (lower is better)
Translates to: LTPQQHLEVLGVLAPKPRTGRDS*HAILLQ
Trigger: TTGAAGGAGAATGGCATGGCAGGAGTCTCTGCCAGT...CCTGGGTTTGGGAGCCAGGACTCCCAGAACCTCTAAGTGCTGCTGTGGAGTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp CCAGCTGTCTTTTGTGCCAGCTTGGCTGTTGAAGCCCAAGTAACTGGCAGAGACGAGTCTGGAGGTTGGTaGTTGCTCACCACTTGGGGC +
Preference number: 4 (lower is better)
Translates to: PAVFCASLAVEAQVTGRDESGGW*LLTTWG
Trigger: GCCCCAAGTGGTGAGCAAGCACCAACCTCCAGACTC...GTCTCTGCCAGTTACTTGGGCTTCAACAGCCAAGCTGGCACAAAAGACAGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp GACTCTTTTTGCCACAGAGCCCCTGGCAGCCGAGAGGACGGGTATTACCATCGACTAGAGCTGGGAGAATaGCTTGGGAGGAGGAAGAGT +
Preference number: 4 (lower is better)
Translates to: DSFCHRAPGSREDGYYHRLELGE*LGRRKS
Trigger: ACTCTTCCTCCTCCCAAGGCATTCTCCCAGCTCTAG...TCGATGGTAATACCCGTCCTCTCGGCTGCCAGGGGCTCTGTGGCAAAAAGAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp CTCACTCCACAGCAGCACTTAGAGGTTCTGGGAGTCCTGGCTCCCAAACCCAGGCAGCTTTCTTCTTTGTaGTCACAGGGCCTAGAGGAG +
Preference number: 4 (lower is better)
Translates to: LTPQQHLEVLGVLAPKPRQLSSL*SQGLEE
Trigger: CTCCTCTAGGCCCTGTGAGCACAAAGAAGAAAGCTG...CCTGGGTTTGGGAGCCAGGACTCCCAGAACCTCTAAGTGCTGCTGTGGAGTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp GAGACGACTCGTGTGCTTTTAACAGATCTTCAGAGTGAAGGTGCTGAGAGTGGATGTCCTGCCATCGGCTaGGGGCTGCAGGGACCCGTT +
Preference number: 4 (lower is better)
Translates to: ETTRVLLTDLQSEGAESGCPAIG*GLQGPV
Trigger: AACGGGTCCCTGCAGCCCCCAGCCGATGGCAGGACA...TCCACTCTCAGCACCTTCACTCTGAAGATCTGTTAAAAGCACACGAGTCGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525810.5
ENST00000527388.5
CDS-3UTR CCA 90 bp ACGACTCGTGTGCTTTTAACAGATCTTCAGAGTGAAGGTGCTGAGAGTGGACAGCCTCCGGGTAGCCCATaGCCTCCGGAGACACCCACT +
Preference number: 4 (lower is better)
Translates to: TTRVLLTDLQSEGAESGQPPGSP*PPETPT
Trigger: AGTGGGTGTCTCCGGAGGCCATGGGCTACCCGGAGG...CTGTCCACTCTCAGCACCTTCACTCTGAAGATCTGTTAAAAGCACACGAGTCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525810.5
ENST00000527388.5
CDS-3UTR CCA 90 bp TTATTACAGCTGTTTACAGCTCCAACTCCAAAGGGGAGCCTGCTGGTTCTGGCAACCTGGTGCCCGTCCTaGGAGTCAGAGTGGAGTGCG +
Preference number: 4 (lower is better)
Translates to: LLQLFTAPTPKGSLLVLATWCPS*ESEWSA
Trigger: CGCACTCCACTCTGACTCCCAGGACGGGCACCAGGT...TGCCAGAACCAGCAGGCTCCCCTTTGGAGTTGGAGCTGTAAACAGCTGTAATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338901.4
CDS-3UTR CCA 90 bp AGGCAGCATTACAGTAGCCTAAGGACTTGCTGGCACTGGGCCAGTCTTGTGCTTGGCTGTCAGCTGGAGTaGGAAGAGCACTCCAACCCT +
Preference number: 4 (lower is better)
Translates to: RQHYSSLRTCWHWASLVLGCQLE*EEHSNP
Trigger: AGGGTTGGAGTGCTCTTCCCACTCCAGCTGACAGCC...AAGCACAAGACTGGCCCAGTGCCAGCAAGTCCTTAGGCTACTGTAATGCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp AGGCAGCATTACAGTAGCCTAAGGACTTGCTGGCACTGGGCCAGTCTTGTGCTTTGGCCTTCCCAGGTTTaGGCTGGATCTAGCACCCAG +
Preference number: 4 (lower is better)
Translates to: RQHYSSLRTCWHWASLVLWPSQV*AGSSTQ
Trigger: CTGGGTGCTAGATCCAGCCCAAACCTGGGAAGGCCA...AAGCACAAGACTGGCCCAGTGCCAGCAAGTCCTTAGGCTACTGTAATGCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp GCATCTCTGGGTTTCTCCCCGGAACTCTCAAGGATTTCAGTTCCCAATTACCACTTGCCACAGAGCCCCTaGCAGCCGAGAGGACGGGTA +
Preference number: 4 (lower is better)
Translates to: ASLGFSPELSRISVPNYHLPQSP*QPRGRV
Trigger: TACCCGTCCTCTCGGCTGCCAGGGGCTCTGTGGCAA...GTGGTAATTGGGAACTGAAATCCTTGAGAGTTCCGGGGAGAAACCCAGAGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp CAAACTTCCCAAAGCCCAGCAAGCTGCCACGGTGTGGCTGTCAGCTGGAGTGGGGTGGAAGAAAGAAGATaGCCATGTGGGACAGGAACT +
Preference number: 4 (lower is better)
Translates to: QTSQSPASCHGVAVSWSGVEERR*PCGTGT
Trigger: AGTTCCTGTCCCACATGGCCATCTTCTTTCTTCCAC...CCCACTCCAGCTGACAGCCACACCGTGGCAGCTTGCTGGGCTTTGGGAAGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp GGGACTTCTGGAGGTCATCCCGTCCAACCCTTCGTCCCCAGACAGAATTTGATTCCCCAAAAGCAGCATTaGGCCTGCTCCAGGCCATTC +
Preference number: 4 (lower is better)
Translates to: GTSGGHPVQPFVPRQNLIPQKQH*ACSRPF
Trigger: GAATGGCCTGGAGCAGGCCCAATGCTGCTTTTGGGG...AATCAAATTCTGTCTGGGGACGAAGGGTTGGACGGGATGACCTCCAGAAGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp AATCAGCTTTCTTCTTTGTGCTCACAGGGCCTAGAGGAGCCTCCAGGCAGGGATCCCCAAAAGCAGCATTaGGCCTGCTCCAGGCCATTC +
Preference number: 4 (lower is better)
Translates to: NQLSSLCSQGLEEPPGRDPQKQH*ACSRPF
Trigger: GAATGGCCTGGAGCAGGCCCAATGCTGCTTTTGGGG...ATCCCTGCCTGGAGGCTCCTCTAGGCCCTGTGAGCACAAAGAAGAAAGCTGATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp GAGACGACTCGTGTGCTTTTAACAGATCTTCAGAGTGAAGGTGCTGAGAGTGGACCCTGGTGCCCGTCCTaGGAGTCAGAGTGGAGTGCG +
Preference number: 4 (lower is better)
Translates to: ETTRVLLTDLQSEGAESGPWCPS*ESEWSA
Trigger: CGCACTCCACTCTGACTCCCAGGACGGGCACCAGGG...TCCACTCTCAGCACCTTCACTCTGAAGATCTGTTAAAAGCACACGAGTCGTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525810.5
CDS-3UTR TCA 90 bp GAGACGACTCGTGTGCTTTTAACAGATCTTCAGAGTGAAGGTGCTGAGAGTGGAGCCGTTCACGACCTCTaGCAGGCGGCTACTGTCCTG +
Preference number: 4 (lower is better)
Translates to: ETTRVLLTDLQSEGAESGAVHDL*QAATVL
Trigger: CAGGACAGTAGCCGCCTGTCAGAGGTCGTGAACGGC...TCCACTCTCAGCACCTTCACTCTGAAGATCTGTTAAAAGCACACGAGTCGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525810.5
ENST00000527388.5
CDS-3UTR TCA 90 bp GCTCTGCTGTGGCTTTTTGAAGCCAGAGTGAAGAAAGACTGGGTTAGTACAGCAGCCCAAGGTGACTGGTaGTGGGGCTGTCAGGGTCGA +
Preference number: 4 (lower is better)
Translates to: ALLWLFEARVKKDWVSTAAQGDW*WGCQGR
Trigger: TCGACCCTGACAGCCCCATCACCAGTCACCTTGGGC...TGCTGTACTAACCCAGTCTTTCTTCACTCTGGCTTCAAAAAGCCACAGCAGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374552.9
ENST00000374553.6
CDS-3UTR TCA 90 bp GGGTCCTACCATATGATCTGTTGGGAAGCTTGGGGTTTAGGGGAAGGTGAATTTGCCCAAGGTGACTGGTaGTGGGGCTGTCAGGGTCGA +
Preference number: 4 (lower is better)
Translates to: GSYHMICWEAWGLGEGEFAQGDW*WGCQGR
Trigger: TCGACCCTGACAGCCCCATCACCAGTCACCTTGGGC...AAATTCACCTTCCCCTAAACCCCAAGCTTCCCAACAGATCATATGGTAGGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374552.9
ENST00000374553.6
CDS-3UTR TCA 90 bp GAGACGACTCGTGTGCTTTTAACAGATCTTCAGAGTGAAGGTGCTGAGAGTGGAGCCCAAGGTGACTGGTaGTGGGGCTGTCAGGGTCGA +
Preference number: 4 (lower is better)
Translates to: ETTRVLLTDLQSEGAESGAQGDW*WGCQGR
Trigger: TCGACCCTGACAGCCCCATCACCAGTCACCTTGGGC...TCCACTCTCAGCACCTTCACTCTGAAGATCTGTTAAAAGCACACGAGTCGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525810.5
ENST00000527388.5
CDS-3UTR TCA 90 bp GGGTCCTACCATATGATCTGTTGGGAAGCTTGGGGTTTAGGGGAAGGTGAATTTGACGGCTGCCCAAGGTaGCTGGTGATGGGGCTGTCA +
Preference number: 4 (lower is better)
Translates to: GSYHMICWEAWGLGEGEFDGCPR*LVMGLS
Trigger: TGACAGCCCCATCACCAGTCACCTTGGGCAGCCGTC...AAATTCACCTTCCCCTAAACCCCAAGCTTCCCAACAGATCATATGGTAGGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374552.9
ENST00000374553.6
CDS-3UTR TCA 90 bp ATTACAGCTGTTTACAGCTCCAACTCCAAAGGGGAGCCTGCTGGTTCTGGCATCATTCCTCAGGGGCGCTaGTCCTCACTAGAACGCCGA +
Preference number: 4 (lower is better)
Translates to: ITAVYSSNSKGEPAGSGIIPQGR*SSLERR
Trigger: TCGGCGTTCTAGTGAGGATCAGCGCCCCTGAGGAAT...GATGCCAGAACCAGCAGGCTCCCCTTTGGAGTTGGAGCTGTAAACAGCTGTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338901.4
CDS-3UTR TCA 90 bp ACTTGCTGGCACTGGGCCAGTCTTGTGCTTTCCAGTCCAGAGGCTAGAGCTGGGAGATCATTCTTGACTTaGATTGCTGACCCTTGGCCC +
Preference number: 4 (lower is better)
Translates to: TCWHWASLVLSSPEARAGRSFLT*IADPWP
Trigger: GGGCCAAGGGTCAGCAATTCAAGTCAAGAATGATCT...CCCAGCTCTAGCCTCTGGACTGGAAAGCACAAGACTGGCCCAGTGCCAGCAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR TCA 90 bp GGGTCCTACCATATGATCTGTTGGGAAGCTTGGGGTTTAGGGGAAGGTGAATTTCAGCGTGCACCATCTTaGCGGCGATCTTCTGCCGGG +
Preference number: 4 (lower is better)
Translates to: GSYHMICWEAWGLGEGEFQRAPS*RRSSAG
Trigger: CCCGGCAGAAGATCGCCGTCAAGATGGTGCACGCTG...AAATTCACCTTCCCCTAAACCCCAAGCTTCCCAACAGATCATATGGTAGGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR TCA 90 bp AGGCAGCATTACAGTAGCCTAAGGACTTGCTGGCACTGGGCCAGTCTTGTGCTTTTTAGGGGAGCAGCATaGGCACCTGCGGTGACAATG +
Preference number: 4 (lower is better)
Translates to: RQHYSSLRTCWHWASLVLFRGAA*APAVTM
Trigger: CATTGTCACCGCAGGTGCTCATGCTGCTCCCCTAAA...AAGCACAAGACTGGCCCAGTGCCAGCAAGTCCTTAGGCTACTGTAATGCTGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR TCA 90 bp CAAACTTCCCAAAGCCCAGCAAGCTGCCACGGTGTGGCTGTCAGCTGGAGTGGGTTGTCACTTTGCCAATaGCTTAGCAGCAATAGGGCT +
Preference number: 4 (lower is better)
Translates to: QTSQSPASCHGVAVSWSGLSLCQ*LSSNRA
Trigger: AGCCCTATTGCTGCTAAGTCATTGGCAAAGTGACAA...CCCACTCCAGCTGACAGCCACACCGTGGCAGCTTGCTGGGCTTTGGGAAGTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp GAGACGACTCGTGTGCTTTTAACAGATCTTCAGAGTGAAGGTGCTGAGAGTGGAGGGAGCAGCCGCATGTaGAGCTCTACTCCGAGGGGT +
Preference number: 4 (lower is better)
Translates to: ETTRVLLTDLQSEGAESGGSSRM*SSTPRG
Trigger: ACCCCTCGGAGTAGAGCTGCACATGCGGCTGCTCCC...TCCACTCTCAGCACCTTCACTCTGAAGATCTGTTAAAAGCACACGAGTCGTCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525810.5
ENST00000527388.5
CDS-3UTR GCA 90 bp CGCGCTGAAAATGCGGTTAAAAGTTGTTTCAACGGGCGGGCGTGGAACAGTTATCCCGGTTCCAATGGCTaGTGCTTAGGTGACGGCTGC +
Preference number: 4 (lower is better)
Translates to: RAENAVKSCFNGRAWNSYPGSNG*CLGDGC
Trigger: GCAGCCGTCACCTAAGCAGCAGCCATTGGAACCGGG...ATAACTGTTCCACGCCCGCCCGTTGAAACAACTTTTAACCGCATTTTCAGCGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338901.4
CDS-3UTR GCA 90 bp AAGCTAAAGAATATCCCAGACTCACATGACCACAGGTCCCAGGTTAGGCACCTGTTGACGGCGATCTTCTaGCGGGCCTTGAGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: KLKNIPDSHDHRSQVRHLLTAIF*RALRRQ
Trigger: CTGCCTCCTCAAGGCCCGGCAGAAGATCGCCGTCAA...CAGGTGCCTAACCTGGGACCTGTGGTCATGTGAGTCTGGGATATTCTTTAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp AATCAGCTTTCTTCTTTGTGCTCACAGGGCCTAGAGGAGCCTCCAGGCAGGGATCCCCAGAGTCTGGAGTaGACCTTTGCTTTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: NQLSSLCSQGLEEPPGRDPQSLE*TFAFSG
Trigger: GCCAGAGAAAGCAAAGGTGCACTCCAGACTCTGGGG...ATCCCTGCCTGGAGGCTCCTCTAGGCCCTGTGAGCACAAAGAAGAAAGCTGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp GCCAGCTTGGCTGTTGAAGCCCAAGTAACTGGCAGAGACTCCTGCCATGCCATTTCCCACTGCCAAGGATaGTCCTTGGCAGGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: ASLAVEAQVTGRDSCHAISHCQG*SLAGFS
Trigger: AGAGAAACCTGCCAAGGAGCATCCTTGGCAGTGGGA...AATGGCATGGCAGGAGTCTCTGCCAGTTACTTGGGCTTCAACAGCCAAGCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp GACTCTTTTTGCCACAGAGCCCCTGGCAGCCGAGAGGACGGGTATTACCATCGACAGGTAAAAAGGCTCTaGCTTGCTAATGCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: DSFCHRAPGSREDGYYHRQVKRL*LANAQE
Trigger: CTCCTGGGCATTAGCAAGGCAGAGCCTTTTTACCTG...TCGATGGTAATACCCGTCCTCTCGGCTGCCAGGGGCTCTGTGGCAAAAAGAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp AGGCAGCATTACAGTAGCCTAAGGACTTGCTGGCACTGGGCCAGTCTTGTGCTTCAGATCCCTGCTCAGTaGCTAGACACTGGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: RQHYSSLRTCWHWASLVLQIPAQ*LDTGFS
Trigger: GGAGAAGCCAGTGTCTAGGCACTGAGCAGGGATCTG...AAGCACAAGACTGGCCCAGTGCCAGCAAGTCCTTAGGCTACTGTAATGCTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp CAGACTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTGGATCTAGCACCCAGAAAGGTTTCTGCTACAACTaGGGACTGTCCGAGGCACTT +
Preference number: 4 (lower is better)
Translates to: QTVQGWPSQVWAGSSTQKGFCYN*GLSEAL
Trigger: AAGTGCCTCGGACAGTCCGCAGTTGTAGCAGAAACC...TTTCTGGGTGCTAGATCCAGCCCAAACCTGGGAAGGCCAGCCTTGTACAGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp CTCACTCCACAGCAGCACTTAGAGGTTCTGGGAGTCCTGGCTCCCAAACCCAGGGTTCTTGTTGGTTTCTaGTACAACTGCGGACTGTCC +
Preference number: 4 (lower is better)
Translates to: LTPQQHLEVLGVLAPKPRVLVGF*YNCGLS
Trigger: GGACAGTCCGCAGTTGTAGCAGAAACCAACAAGAAC...CCTGGGTTTGGGAGCCAGGACTCCCAGAACCTCTAAGTGCTGCTGTGGAGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp CAAACTTCCCAAAGCCCAGCAAGCTGCCACGGTGTGGCTGTCAGCTGGAGTGGGGCTGCTCCAACATTGTaGCAGGAAGATTCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: QTSQSPASCHGVAVSWSGAAPTL*QEDSSE
Trigger: TTCAGAAGAATCTTCCTGGCACAATGTTGGAGCAGC...CCCACTCCAGCTGACAGCCACACCGTGGCAGCTTGCTGGGCTTTGGGAAGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp CAGACTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTGGATCTAGCACCCAGAAATCCCCAGCTACCTATTaGTTCCCTCATCATCCCTCG +
Preference number: 4 (lower is better)
Translates to: QTVQGWPSQVWAGSSTQKSPATY*FPHHPS
Trigger: CGAGGGATGATGAGGGAAGCAATAGGTAGCTGGGGA...TTTCTGGGTGCTAGATCCAGCCCAAACCTGGGAAGGCCAGCCTTGTACAGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp CTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTGGATCTAGCACCCAGAAACCAGCAGAGACTCCTGCCATaGCATTCTCCTTCAAACCTC +
Preference number: 4 (lower is better)
Translates to: LYKAGLPRFGLDLAPRNQQRLLP*HSPSNL
Trigger: GAGGTTTGAAGGAGAATGGCATGGCAGGAGTCTCTG...CTGGTTTCTGGGTGCTAGATCCAGCCCAAACCTGGGAAGGCCAGCCTTGTACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp CAGACTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTGGATCTAGCACCCAGAAAAGTTCTGATGAAGGCTaGAGCTACTCTCTCCCTGCC +
Preference number: 4 (lower is better)
Translates to: QTVQGWPSQVWAGSSTQKSSDEG*SYSLPA
Trigger: GGCAGGGAGAGAGTAGCTGCAGCCTTCATCAGAACT...TTTCTGGGTGCTAGATCCAGCCCAAACCTGGGAAGGCCAGCCTTGTACAGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp CAGACTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTGGATCTAGCACCCAGAAACTAGAGCTGGGAGAATaGCTTGGGAGGAGGAAGAGT +
Preference number: 4 (lower is better)
Translates to: QTVQGWPSQVWAGSSTQKLELGE*LGRRKS
Trigger: ACTCTTCCTCCTCCCAAGGCATTCTCCCAGCTCTAG...TTTCTGGGTGCTAGATCCAGCCCAAACCTGGGAAGGCCAGCCTTGTACAGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp GCCAGCTTGGCTGTTGAAGCCCAAGTAACTGGCAGAGACTCCTGCCATGCCATTAAGCAGCATTGGGCCTaGTCCAGGCCATTCTCACAA +
Preference number: 4 (lower is better)
Translates to: ASLAVEAQVTGRDSCHAIKQHWA*SRPFSQ
Trigger: TTGTGAGAATGGCCTGGAGCAGGCCCAATGCTGCTT...AATGGCATGGCAGGAGTCTCTGCCAGTTACTTGGGCTTCAACAGCCAAGCTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp AAGCTAAAGAATATCCCAGACTCACATGACCACAGGTCCCAGGTTAGGCACCTGAATCCCTGGAATTCCTaGGGGTCCCTGGGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: KLKNIPDSHDHRSQVRHLNPWNS*GSLGSW
Trigger: CCAGGACCCCAGGGACCCCCAGGAATTCCAGGGATT...CAGGTGCCTAACCTGGGACCTGTGGTCATGTGAGTCTGGGATATTCTTTAGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp CAGACTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTGGATCTAGCACCCAGAAAACCTGGAGGACCAGGTaGTCCCATAACAGTTGTTCC +
Preference number: 4 (lower is better)
Translates to: QTVQGWPSQVWAGSSTQKTWRTR*SHNSCS
Trigger: GGAACAACTGTTATGGGACCACCTGGTCCTCCAGGT...TTTCTGGGTGCTAGATCCAGCCCAAACCTGGGAAGGCCAGCCTTGTACAGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp CTCACTCCACAGCAGCACTTAGAGGTTCTGGGAGTCCTGGCTCCCAAACCCAGGTCACCCTGGAGTCACTaGGGAATAAATAACACTGGG +
Preference number: 4 (lower is better)
Translates to: LTPQQHLEVLGVLAPKPRSPWSH*GINNTG
Trigger: CCCAGTGTTATTTATTCCCCAGTGACTCCAGGGTGA...CCTGGGTTTGGGAGCCAGGACTCCCAGAACCTCTAAGTGCTGCTGTGGAGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp GCCCACAAATGTCCTCGTCCCATTCTCCATGCAAGCATTGGTCCTCTGGCAAATGGCTGTCAGCTGGAGTaGGAAGAGCACTCCAACCCT +
Preference number: 4 (lower is better)
Translates to: AHKCPRPILHASIGPLANGCQLE*EEHSNP
Trigger: AGGGTTGGAGTGCTCTTCCCACTCCAGCTGACAGCC...ATTTGCCAGAGGACCAATGCTTGCATGGAGAATGGGACGAGGACATTTGTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp CAGACTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTGGATCTAGCACCCAGAAAAGGCGGGCAGGTTTGTaGCCATTCCCTGTGATTGTT +
Preference number: 4 (lower is better)
Translates to: QTVQGWPSQVWAGSSTQKRRAGL*PFPVIV
Trigger: AACAATCACAGGGAATGGCCACAAACCTGCCCGCCT...TTTCTGGGTGCTAGATCCAGCCCAAACCTGGGAAGGCCAGCCTTGTACAGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp AGGCAGCATTACAGTAGCCTAAGGACTTGCTGGCACTGGGCCAGTCTTGTGCTTTCAGTGCCTAGACACTaGCTTCTCCTGAGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: RQHYSSLRTCWHWASLVLSVPRH*LLLSLA
Trigger: AGCCAGGCTCAGGAGAAGCCAGTGTCTAGGCACTGA...AAGCACAAGACTGGCCCAGTGCCAGCAAGTCCTTAGGCTACTGTAATGCTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp TTTCAGGAACAAGAGGAGCAGACTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTCAGACTGTACAAGGCTaGCCTTCCCAGGTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: FQEQEEQTVQGWPSQVWAQTVQG*PSQVWA
Trigger: AGCCCAAACCTGGGAAGGCCAGCCTTGTACAGTCTG...AGCCCAAACCTGGGAAGGCCAGCCTTGTACAGTCTGCTCCTCTTGTTCCTGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp ACTTGCTGGCACTGGGCCAGTCTTGTGCTTTCCAGTCCAGAGGCTAGAGCTGGGTCTACACATGATGGTTaGCTGGTTCCTAGGATGGGT +
Preference number: 4 (lower is better)
Translates to: TCWHWASLVLSSPEARAGSTHDG*LVPRMG
Trigger: ACCCATCCTAGGAACCAGCCAACCATCATGTGTAGA...CCCAGCTCTAGCCTCTGGACTGGAAAGCACAAGACTGGCCCAGTGCCAGCAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp TTTCAGGAACAAGAGGAGCAGACTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTGCTGAGTCTGGAGGTTaGTGCTTGCTCACCACTTGG +
Preference number: 4 (lower is better)
Translates to: FQEQEEQTVQGWPSQVWAAESGG*CLLTTW
Trigger: CCAAGTGGTGAGCAAGCACCAACCTCCAGACTCAGC...AGCCCAAACCTGGGAAGGCCAGCCTTGTACAGTCTGCTCCTCTTGTTCCTGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp CTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTGGATCTAGCACCCAGAAACCAGCCAGCCTGGAGTTTGTaGGTGGAAGAAAGAAGATGG +
Preference number: 4 (lower is better)
Translates to: LYKAGLPRFGLDLAPRNQPAWSL*VEERRW
Trigger: CCATCTTCTTTCTTCCACCCACAAACTCCAGGCTGG...CTGGTTTCTGGGTGCTAGATCCAGCCCAAACCTGGGAAGGCCAGCCTTGTACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp AGGCAGCATTACAGTAGCCTAAGGACTTGCTGGCACTGGGCCAGTCTTGTGCTTAGGACTTGCTGGCACTaGGCCAGTCTTGTGCTTTCC +
Preference number: 4 (lower is better)
Translates to: RQHYSSLRTCWHWASLVLRTCWH*ASLVLS
Trigger: GGAAAGCACAAGACTGGCCCAGTGCCAGCAAGTCCT...AAGCACAAGACTGGCCCAGTGCCAGCAAGTCCTTAGGCTACTGTAATGCTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp AACATAAAGGCCACAAGTTCTGTGGGTCCCAGAGGCCTGCTGCTCCAACATTGTCCCCAAAAGCAGCATTaGGCCTGCTCCAGGCCATTC +
Preference number: 4 (lower is better)
Translates to: NIKATSSVGPRGLLLQHCPQKQH*ACSRPF
Trigger: GAATGGCCTGGAGCAGGCCCAATGCTGCTTTTGGGG...ACAATGTTGGAGCAGCAGGCCTCTGGGACCCACAGAACTTGTGGCCTTTATGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp GACTCTTTTTGCCACAGAGCCCCTGGCAGCCGAGAGGACGGGTATTACCATCGACACAGTATCTCACACTaGATGCTGACCCCCAAAAGC +
Preference number: 4 (lower is better)
Translates to: DSFCHRAPGSREDGYYHRHSISH*MLTPKS
Trigger: GCTTTTGGGGGTCAGCATCCAGTGTGAGATACTGTG...TCGATGGTAATACCCGTCCTCTCGGCTGCCAGGGGCTCTGTGGCAAAAAGAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp ACGACTCGTGTGCTTTTAACAGATCTTCAGAGTGAAGGTGCTGAGAGTGGACAGTCCTGGTGCCCGTCCTaGGAGTCAGAGTGGAGTGCG +
Preference number: 4 (lower is better)
Translates to: TTRVLLTDLQSEGAESGQSWCPS*ESEWSA
Trigger: CGCACTCCACTCTGACTCCCAGGACGGGCACCAGGA...CTGTCCACTCTCAGCACCTTCACTCTGAAGATCTGTTAAAAGCACACGAGTCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527388.5
3UTR CAA 72 bp ACCCAAGTACGGATTCAGGGTCTTAGGCGGGCAGGTTaGTGGCCATTCCCTGTGATTGTTCCAAAGCACAGC +
Preference number: 4 (lower is better)
Translates to: TQVRIQGLRRAG*WPFPVIVPKHS
Trigger: GCTGTGCTTTGGAACAATCACAGGGAATGGCCACAAACCTGCCCGCCTAAGACCCTGAATCCGTACTTGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR CAA 72 bp GTTAGGGCCAGACACATGCCTGGAGTTCACCTCACCTaGGGTTGCAAGGCTGTCATTAGCAACCAGACAACG +
Preference number: 4 (lower is better)
Translates to: VRARHMPGVHLT*GCKAVISNQTT
Trigger: CGTTGTCTGGTTGCTAATGACAGCCTTGCAACCCAAGGTGAGGTGAACTCCAGGCATGTGTCTGGCCCTAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp CAGAGGGAAGACACAACTCATTGGTGTCCAAAGGAATATCCATTAGAATATCAGGCAGGGACCCGTTCCTaGGCGACAGTGGCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: QREDTTHWCPKEYPLEYQAGTRS*ATVAGR
Trigger: CCGCCCAGCCACTGTCGCGCAGGAACGGGTCCCTGC...CTGATATTCTAATGGATATTCCTTTGGACACCAATGAGTTGTGTCTTCCCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527388.5
CDS-3UTR GCA 90 bp TGGGTTTCTCCCCGGAACTCTCAAGGATTTCAGTTCCCAATTACCACTTTTATTTTAGGGTGCCAGAGGTaGCAGGGGTGCCCGAGCCGC +
Preference number: 4 (lower is better)
Translates to: WVSPRNSQGFQFPITTFILGCQR*QGCPSR
Trigger: GCGGCTCGGGCACCCCTGGCACCTCTGGCACCCTAA...AATAAAAGTGGTAATTGGGAACTGAAATCCTTGAGAGTTCCGGGGAGAAACCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000374552.9
ENST00000374553.6
CDS-3UTR GCA 90 bp ACGACTCGTGTGCTTTTAACAGATCTTCAGAGTGAAGGTGCTGAGAGTGGACAGCCCGGTTCCAATGGCTaGTGCTTAGGTGACGGCTGC +
Preference number: 4 (lower is better)
Translates to: TTRVLLTDLQSEGAESGQPGSNG*CLGDGC
Trigger: GCAGCCGTCACCTAAGCAGCAGCCATTGGAACCGGG...CTGTCCACTCTCAGCACCTTCACTCTGAAGATCTGTTAAAAGCACACGAGTCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525810.5
ENST00000527388.5
CDS-3UTR GCA 90 bp AAGCTAAAGAATATCCCAGACTCACATGACCACAGGTCCCAGGTTAGGCACCTGGGAGTCAGAGTGGAGTaGGGCTTCTCCCGGTTCCAA +
Preference number: 4 (lower is better)
Translates to: KLKNIPDSHDHRSQVRHLGVRVE*GFSRFQ
Trigger: TTGGAACCGGGAGAAGCCGCACTCCACTCTGACTCC...CAGGTGCCTAACCTGGGACCTGTGGTCATGTGAGTCTGGGATATTCTTTAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374552.9
ENST00000374553.6
CDS-3UTR GCA 90 bp AACATAAAGGCCACAAGTTCTGTGGGTCCCAGAGGCCTGCTGCTCCAACATTGTTCTCGATGCTGCGTGTaGACTGCAGGAAGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: NIKATSSVGPRGLLLQHCSRCCV*TAGRAS
Trigger: AGAAGCCCTTCCTGCAGTGCACACGCAGCATCGAGA...ACAATGTTGGAGCAGCAGGCCTCTGGGACCCACAGAACTTGTGGCCTTTATGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp GGGACTTCTGGAGGTCATCCCGTCCAACCCTTCGTCCCCAGACAGAATTTGATTGAGGAGGCAGACGCCTaGGGTATAGCAAGTGTTGTA +
Preference number: 4 (lower is better)
Translates to: GTSGGHPVQPFVPRQNLIEEADA*GIASVV
Trigger: TACAACACTTGCTATACCGCAGGCGTCTGCCTCCTC...AATCAAATTCTGTCTGGGGACGAAGGGTTGGACGGGATGACCTCCAGAAGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp CCAGCTGTCTTTTGTGCCAGCTTGGCTGTTGAAGCCCAAGTAACTGGCAGAGACGAGGAGGCAGACGCCTaGGGTATAGCAAGTGTTGTA +
Preference number: 4 (lower is better)
Translates to: PAVFCASLAVEAQVTGRDEEADA*GIASVV
Trigger: TACAACACTTGCTATACCGCAGGCGTCTGCCTCCTC...GTCTCTGCCAGTTACTTGGGCTTCAACAGCCAAGCTGGCACAAAAGACAGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp AGGCAGCATTACAGTAGCCTAAGGACTTGCTGGCACTGGGCCAGTCTTGTGCTTATGGAGATGTCAGCGTaGACCATCTTGACGGCGATC +
Preference number: 4 (lower is better)
Translates to: RQHYSSLRTCWHWASLVLMEMSA*TILTAI
Trigger: GATCGCCGTCAAGATGGTGCACGCTGACATCTCCAT...AAGCACAAGACTGGCCCAGTGCCAGCAAGTCCTTAGGCTACTGTAATGCTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp GCCAGCTTGGCTGTTGAAGCCCAAGTAACTGGCAGAGACTCCTGCCATGCCATTGCATTTCTCTGCGGCTaGAACACCAATACACCTCAC +
Preference number: 4 (lower is better)
Translates to: ASLAVEAQVTGRDSCHAIAFLCG*NTNTPH
Trigger: GTGAGGTGTATTGGTGTTGCAGCCGCAGAGAAATGC...AATGGCATGGCAGGAGTCTCTGCCAGTTACTTGGGCTTCAACAGCCAAGCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp ACTTGCTGGCACTGGGCCAGTCTTGTGCTTTCCAGTCCAGAGGCTAGAGCTGGGGGGGTTGAAGAGTCATaGCATAAGTCAGTCAACATG +
Preference number: 4 (lower is better)
Translates to: TCWHWASLVLSSPEARAGGVEES*HKSVNM
Trigger: CATGTTGACTGACTTATGGCATGACTCTTCAACCCC...CCCAGCTCTAGCCTCTGGACTGGAAAGCACAAGACTGGCCCAGTGCCAGCAAGT
53% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp AACATAAAGGCCACAAGTTCTGTGGGTCCCAGAGGCCTGCTGCTCCAACATTGTCCCCAGAGTCTGGAGTaGACCTTTGCTTTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: NIKATSSVGPRGLLLQHCPQSLE*TFAFSG
Trigger: GCCAGAGAAAGCAAAGGTGCACTCCAGACTCTGGGG...ACAATGTTGGAGCAGCAGGCCTCTGGGACCCACAGAACTTGTGGCCTTTATGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp TTTCAGGAACAAGAGGAGCAGACTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTTCCCACTGCCAAGGATaGTCCTTGGCAGGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: FQEQEEQTVQGWPSQVWASHCQG*SLAGFS
Trigger: AGAGAAACCTGCCAAGGAGCATCCTTGGCAGTGGGA...AGCCCAAACCTGGGAAGGCCAGCCTTGTACAGTCTGCTCCTCTTGTTCCTGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp GCCAGCTTGGCTGTTGAAGCCCAAGTAACTGGCAGAGACTCCTGCCATGCCATTCAGGTAAAAAGGCTCTaGCTTGCTAATGCCCAGGAG +
Preference number: 4 (lower is better)
Translates to: ASLAVEAQVTGRDSCHAIQVKRL*LANAQE
Trigger: CTCCTGGGCATTAGCAAGGCAGAGCCTTTTTACCTG...AATGGCATGGCAGGAGTCTCTGCCAGTTACTTGGGCTTCAACAGCCAAGCTGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp GGGACTTCTGGAGGTCATCCCGTCCAACCCTTCGTCCCCAGACAGAATTTGATTTTAGGGCCAGACACATaGCTGGAGTTCACCTCACCT +
Preference number: 4 (lower is better)
Translates to: GTSGGHPVQPFVPRQNLILGPDT*LEFTSP
Trigger: AGGTGAGGTGAACTCCAGGCATGTGTCTGGCCCTAA...AATCAAATTCTGTCTGGGGACGAAGGGTTGGACGGGATGACCTCCAGAAGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp CCAGCTGTCTTTTGTGCCAGCTTGGCTGTTGAAGCCCAAGTAACTGGCAGAGACATGTCTGACTCTTTTTaGCACAGAGCCCCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: PAVFCASLAVEAQVTGRDMSDSF*HRAPGS
Trigger: GCTGCCAGGGGCTCTGTGGCAAAAAGAGTCAGACAT...GTCTCTGCCAGTTACTTGGGCTTCAACAGCCAAGCTGGCACAAAAGACAGCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp ACTTGCTGGCACTGGGCCAGTCTTGTGCTTTCCAGTCCAGAGGCTAGAGCTGGGGCTGCTCCAACATTGTaGCAGGAAGATTCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: TCWHWASLVLSSPEARAGAAPTL*QEDSSE
Trigger: TTCAGAAGAATCTTCCTGGCACAATGTTGGAGCAGC...CCCAGCTCTAGCCTCTGGACTGGAAAGCACAAGACTGGCCCAGTGCCAGCAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp CCAGCTGTCTTTTGTGCCAGCTTGGCTGTTGAAGCCCAAGTAACTGGCAGAGACTCCCCAGCTACCTATTaGTTCCCTCATCATCCCTCG +
Preference number: 4 (lower is better)
Translates to: PAVFCASLAVEAQVTGRDSPATY*FPHHPS
Trigger: CGAGGGATGATGAGGGAAGCAATAGGTAGCTGGGGA...GTCTCTGCCAGTTACTTGGGCTTCAACAGCCAAGCTGGCACAAAAGACAGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp AGGCAGCATTACAGTAGCCTAAGGACTTGCTGGCACTGGGCCAGTCTTGTGCTTTCGTCCCATTCTCCATaGAAGCATTGGTCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: RQHYSSLRTCWHWASLVLSSHSP*KHWSSG
Trigger: GCCAGAGGACCAATGCTTGCATGGAGAATGGGACGA...AAGCACAAGACTGGCCCAGTGCCAGCAAGTCCTTAGGCTACTGTAATGCTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp GGGACTTCTGGAGGTCATCCCGTCCAACCCTTCGTCCCCAGACAGAATTTGATTCCTCTGTCATCTGCTTaGCCACAAATGTCCTCGTCC +
Preference number: 4 (lower is better)
Translates to: GTSGGHPVQPFVPRQNLIPLSSA*PQMSSS
Trigger: GGACGAGGACATTTGTGGGCAAGCAGATGACAGAGG...AATCAAATTCTGTCTGGGGACGAAGGGTTGGACGGGATGACCTCCAGAAGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp CCAGCTGTCTTTTGTGCCAGCTTGGCTGTTGAAGCCCAAGTAACTGGCAGAGACATGTGGGACAGGAACTaGTTTACCCCCTCACTCTGC +
Preference number: 4 (lower is better)
Translates to: PAVFCASLAVEAQVTGRDMWDRN*FTPSLC
Trigger: GCAGAGTGAGGGGGTAAAGCAGTTCCTGTCCCACAT...GTCTCTGCCAGTTACTTGGGCTTCAACAGCCAAGCTGGCACAAAAGACAGCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp TTTCAGGAACAAGAGGAGCAGACTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTAGTTCTGATGAAGGCTaGAGCTACTCTCTCCCTGCC +
Preference number: 4 (lower is better)
Translates to: FQEQEEQTVQGWPSQVWASSDEG*SYSLPA
Trigger: GGCAGGGAGAGAGTAGCTGCAGCCTTCATCAGAACT...AGCCCAAACCTGGGAAGGCCAGCCTTGTACAGTCTGCTCCTCTTGTTCCTGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp CAGACTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTGGATCTAGCACCCAGAAACAGCTTTCTTCTTTGTaGTCACAGGGCCTAGAGGAG +
Preference number: 4 (lower is better)
Translates to: QTVQGWPSQVWAGSSTQKQLSSL*SQGLEE
Trigger: CTCCTCTAGGCCCTGTGAGCACAAAGAAGAAAGCTG...TTTCTGGGTGCTAGATCCAGCCCAAACCTGGGAAGGCCAGCCTTGTACAGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp AGGCAGCATTACAGTAGCCTAAGGACTTGCTGGCACTGGGCCAGTCTTGTGCTTAAGCAGCATTGGGCCTaGTCCAGGCCATTCTCACAA +
Preference number: 4 (lower is better)
Translates to: RQHYSSLRTCWHWASLVLKQHWA*SRPFSQ
Trigger: TTGTGAGAATGGCCTGGAGCAGGCCCAATGCTGCTT...AAGCACAAGACTGGCCCAGTGCCAGCAAGTCCTTAGGCTACTGTAATGCTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp GAGACGACTCGTGTGCTTTTAACAGATCTTCAGAGTGAAGGTGCTGAGAGTGGACATTGGTGTCCCTGGTaGCCGTCCTGGGAGTCAGAG +
Preference number: 4 (lower is better)
Translates to: ETTRVLLTDLQSEGAESGHWCPW*PSWESE
Trigger: CTCTGACTCCCAGGACGGGCACCAGGGACACCAATG...TCCACTCTCAGCACCTTCACTCTGAAGATCTGTTAAAAGCACACGAGTCGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525810.5
CDS-3UTR CCA 90 bp CCAGCTGTCTTTTGTGCCAGCTTGGCTGTTGAAGCCCAAGTAACTGGCAGAGACAATTCCAGGAATCCCTaGAATTCCTGGGGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: PAVFCASLAVEAQVTGRDNSRNP*NSWGSL
Trigger: CAGGGACCCCCAGGAATTCCAGGGATTCCTGGAATT...GTCTCTGCCAGTTACTTGGGCTTCAACAGCCAAGCTGGCACAAAAGACAGCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp TTTCAGGAACAAGAGGAGCAGACTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTAATTCCAGGAATCCCTaGAATTCCTGGGGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: FQEQEEQTVQGWPSQVWANSRNP*NSWGSL
Trigger: CAGGGACCCCCAGGAATTCCAGGGATTCCTGGAATT...AGCCCAAACCTGGGAAGGCCAGCCTTGTACAGTCTGCTCCTCTTGTTCCTGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp CCAGCTGTCTTTTGTGCCAGCTTGGCTGTTGAAGCCCAAGTAACTGGCAGAGACTGCACCACAGCTGGCTaGTTTTCTCGAGTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: PAVFCASLAVEAQVTGRDCTTAG*FSRVPA
Trigger: AGCTGGAACTCGAGAAAACCAGCCAGCTGTGGTGCA...GTCTCTGCCAGTTACTTGGGCTTCAACAGCCAAGCTGGCACAAAAGACAGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp AGGCAGCATTACAGTAGCCTAAGGACTTGCTGGCACTGGGCCAGTCTTGTGCTTCGGACAGAGGCAAAATaGGGGGAATCTAGGATGCAG +
Preference number: 4 (lower is better)
Translates to: RQHYSSLRTCWHWASLVLRTEAK*GESRMQ
Trigger: CTGCATCCTAGATTCCCCCCATTTTGCCTCTGTCCG...AAGCACAAGACTGGCCCAGTGCCAGCAAGTCCTTAGGCTACTGTAATGCTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp CTGAGAGACCCTGGTAGTATCAAAGTCTCTAAGGTATGGTGGAAAGAGATAAGGGAGCAGCAGCCCCCTTaGGGTCAGATGTCCACCCCC +
Preference number: 4 (lower is better)
Translates to: LRDPGSIKVSKVWWKEIREQQPP*GQMSTP
Trigger: GGGGGTGGACATCTGACCCCAAGGGGGCTGCTGCTC...CCTTATCTCTTTCCACCATACCTTAGAGACTTTGATACTACCAGGGTCTCTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp GCTCTGCTGTGGCTTTTTGAAGCCAGAGTGAAGAAAGACTGGGTTAGTACAGCACAAGCTGCCACGGTGTaGCTGTCAGCTGGAGTGGGA +
Preference number: 4 (lower is better)
Translates to: ALLWLFEARVKKDWVSTAQAATV*LSAGVG
Trigger: TCCCACTCCAGCTGACAGCCACACCGTGGCAGCTTG...TGCTGTACTAACCCAGTCTTTCTTCACTCTGGCTTCAAAAAGCCACAGCAGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp AGGCAGCATTACAGTAGCCTAAGGACTTGCTGGCACTGGGCCAGTCTTGTGCTTAGGCGGGCAGGTTTGTaGCCATTCCCTGTGATTGTT +
Preference number: 4 (lower is better)
Translates to: RQHYSSLRTCWHWASLVLRRAGL*PFPVIV
Trigger: AACAATCACAGGGAATGGCCACAAACCTGCCCGCCT...AAGCACAAGACTGGCCCAGTGCCAGCAAGTCCTTAGGCTACTGTAATGCTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp CAGACTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTGGATCTAGCACCCAGAAACTTTCAGATAAGGCCTaGCCTAACGTCCACTTGGGT +
Preference number: 4 (lower is better)
Translates to: QTVQGWPSQVWAGSSTQKLSDKA*PNVHLG
Trigger: ACCCAAGTGGACGTTAGGCCAGGCCTTATCTGAAAG...TTTCTGGGTGCTAGATCCAGCCCAAACCTGGGAAGGCCAGCCTTGTACAGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp CTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTGGATCTAGCACCCAGAAACCAGATCTGTTGGGAAGCTTaGGGTTTAGGGGAAGGTGAA +
Preference number: 4 (lower is better)
Translates to: LYKAGLPRFGLDLAPRNQICWEA*GLGEGE
Trigger: TTCACCTTCCCCTAAACCCCAAGCTTCCCAACAGAT...CTGGTTTCTGGGTGCTAGATCCAGCCCAAACCTGGGAAGGCCAGCCTTGTACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp GACTCTTTTTGCCACAGAGCCCCTGGCAGCCGAGAGGACGGGTATTACCATCGAATCTGTTGGGAAGCTTaGGGTTTAGGGGAAGGTGAA +
Preference number: 4 (lower is better)
Translates to: DSFCHRAPGSREDGYYHRICWEA*GLGEGE
Trigger: TTCACCTTCCCCTAAACCCCAAGCTTCCCAACAGAT...TCGATGGTAATACCCGTCCTCTCGGCTGCCAGGGGCTCTGTGGCAAAAAGAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp ACTTGCTGGCACTGGGCCAGTCTTGTGCTTTCCAGTCCAGAGGCTAGAGCTGGGTACCATATGATCTGTTaGGAAGCTTGGGGTTTAGGG +
Preference number: 4 (lower is better)
Translates to: TCWHWASLVLSSPEARAGYHMIC*EAWGLG
Trigger: CCCTAAACCCCAAGCTTCCCAACAGATCATATGGTA...CCCAGCTCTAGCCTCTGGACTGGAAAGCACAAGACTGGCCCAGTGCCAGCAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp AACAGGGACCTCGGGGTTGAAGAGTCATGCCATAAGTCAGTCAACATGGAACCAGGCCAGACACATGCCTaGAGTTCACCTCACCTTGGG +
Preference number: 4 (lower is better)
Translates to: NRDLGVEESCHKSVNMEPGQTHA*SSPHLG
Trigger: CCCAAGGTGAGGTGAACTCCAGGCATGTGTCTGGCC...TGGTTCCATGTTGACTGACTTATGGCATGACTCTTCAACCCCGAGGTCCCTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp GACTCTTTTTGCCACAGAGCCCCTGGCAGCCGAGAGGACGGGTATTACCATCGAGTAATGGAACAGCTTTaGAGTCAGACCTGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: DSFCHRAPGSREDGYYHRVMEQL*SQTWLK
Trigger: CTTCAGCCAGGTCTGACTCCAAAGCTGTTCCATTAC...TCGATGGTAATACCCGTCCTCTCGGCTGCCAGGGGCTCTGTGGCAAAAAGAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp GCCCACAAATGTCCTCGTCCCATTCTCCATGCAAGCATTGGTCCTCTGGCAAATGCTGAGTCTGGAGGTTaGTGCTTGCTCACCACTTGG +
Preference number: 4 (lower is better)
Translates to: AHKCPRPILHASIGPLANAESGG*CLLTTW
Trigger: CCAAGTGGTGAGCAAGCACCAACCTCCAGACTCAGC...ATTTGCCAGAGGACCAATGCTTGCATGGAGAATGGGACGAGGACATTTGTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp GACTCTTTTTGCCACAGAGCCCCTGGCAGCCGAGAGGACGGGTATTACCATCGAAAGAAGATGGCCATGTaGGACAGGAACTGCTTTACC +
Preference number: 4 (lower is better)
Translates to: DSFCHRAPGSREDGYYHRKKMAM*DRNCFT
Trigger: GGTAAAGCAGTTCCTGTCCCACATGGCCATCTTCTT...TCGATGGTAATACCCGTCCTCTCGGCTGCCAGGGGCTCTGTGGCAAAAAGAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp CTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTGGATCTAGCACCCAGAAACCAGGTGGAAGAAAGAAGATaGCCATGTGGGACAGGAACT +
Preference number: 4 (lower is better)
Translates to: LYKAGLPRFGLDLAPRNQVEERR*PCGTGT
Trigger: AGTTCCTGTCCCACATGGCCATCTTCTTTCTTCCAC...CTGGTTTCTGGGTGCTAGATCCAGCCCAAACCTGGGAAGGCCAGCCTTGTACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp GCCAGCTTGGCTGTTGAAGCCCAAGTAACTGGCAGAGACTCCTGCCATGCCATTCCAGCCTGGAGTTTGTaGGTGGAAGAAAGAAGATGG +
Preference number: 4 (lower is better)
Translates to: ASLAVEAQVTGRDSCHAIPAWSL*VEERRW
Trigger: CCATCTTCTTTCTTCCACCCACAAACTCCAGGCTGG...AATGGCATGGCAGGAGTCTCTGCCAGTTACTTGGGCTTCAACAGCCAAGCTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp AACATAAAGGCCACAAGTTCTGTGGGTCCCAGAGGCCTGCTGCTCCAACATTGTAGCCTAAGGACTTGCTaGCACTGGGCCAGTCTTGTG +
Preference number: 4 (lower is better)
Translates to: NIKATSSVGPRGLLLQHCSLRTC*HWASLV
Trigger: CACAAGACTGGCCCAGTGCCAGCAAGTCCTTAGGCT...ACAATGTTGGAGCAGCAGGCCTCTGGGACCCACAGAACTTGTGGCCTTTATGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR CAA 72 bp AGGCCTGGCCTAACGTCCACTTGGGTTGCAGCAAACTaGAACAAAATCCCTCTGTCCTATCCTCACCCCTTG +
Preference number: 4 (lower is better)
Translates to: RPGLTSTWVAAN*NKIPLSYPHPL
Trigger: CAAGGGGTGAGGATAGGACAGAGGGATTTTGTTCAAGTTTGCTGCAACCCAAGTGGACGTTAGGCCAGGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR TCA 90 bp AATCAGCTTTCTTCTTTGTGCTCACAGGGCCTAGAGGAGCCTCCAGGCAGGGATTGCGAGACCAGTCATTaGGCACTCCACCTGAAAGAT +
Preference number: 4 (lower is better)
Translates to: NQLSSLCSQGLEEPPGRDCETSH*ALHLKD
Trigger: ATCTTTCAGGTGGAGTGCTCAATGACTGGTCTCGCA...ATCCCTGCCTGGAGGCTCCTCTAGGCCCTGTGAGCACAAAGAAGAAAGCTGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR TCA 90 bp CCAGCTGTCTTTTGTGCCAGCTTGGCTGTTGAAGCCCAAGTAACTGGCAGAGACTGCGAGACCAGTCATTaGGCACTCCACCTGAAAGAT +
Preference number: 4 (lower is better)
Translates to: PAVFCASLAVEAQVTGRDCETSH*ALHLKD
Trigger: ATCTTTCAGGTGGAGTGCTCAATGACTGGTCTCGCA...GTCTCTGCCAGTTACTTGGGCTTCAACAGCCAAGCTGGCACAAAAGACAGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR TCA 90 bp TTTCAGGAACAAGAGGAGCAGACTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTCTACCTGACTATAGATaGAGTAGGTGCCGTCCACCA +
Preference number: 4 (lower is better)
Translates to: FQEQEEQTVQGWPSQVWALPDYR*SRCRPP
Trigger: TGGTGGACGGCACCTACTTCATCTATAGTCAGGTAG...AGCCCAAACCTGGGAAGGCCAGCCTTGTACAGTCTGCTCCTCTTGTTCCTGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374552.9
ENST00000616899.1
CDS-3UTR TCA 90 bp AATCAGCTTTCTTCTTTGTGCTCACAGGGCCTAGAGGAGCCTCCAGGCAGGGATTGTGCTTGCTCATGTTaGTGGAGATGTCAGCGTGCA +
Preference number: 4 (lower is better)
Translates to: NQLSSLCSQGLEEPPGRDCACSC*WRCQRA
Trigger: TGCACGCTGACATCTCCATCAACATGAGCAAGCACA...ATCCCTGCCTGGAGGCTCCTCTAGGCCCTGTGAGCACAAAGAAGAAAGCTGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR TCA 90 bp GACTCTTTTTGCCACAGAGCCCCTGGCAGCCGAGAGGACGGGTATTACCATCGAAAAATGAGAGTCATGTaGCCCAAGTACGGATTCAGG +
Preference number: 4 (lower is better)
Translates to: DSFCHRAPGSREDGYYHRKMRVM*PKYGFR
Trigger: CCTGAATCCGTACTTGGGTCACATGACTCTCATTTT...TCGATGGTAATACCCGTCCTCTCGGCTGCCAGGGGCTCTGTGGCAAAAAGAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR TCA 90 bp AACATAAAGGCCACAAGTTCTGTGGGTCCCAGAGGCCTGCTGCTCCAACATTGTGAGGGTCCTACCATATaGTCTGTTGGGAAGCTTGGG +
Preference number: 4 (lower is better)
Translates to: NIKATSSVGPRGLLLQHCEGPTI*SVGKLG
Trigger: CCCAAGCTTCCCAACAGATCATATGGTAGGACCCTC...ACAATGTTGGAGCAGCAGGCCTCTGGGACCCACAGAACTTGTGGCCTTTATGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR TCA 90 bp GGGACTTCTGGAGGTCATCCCGTCCAACCCTTCGTCCCCAGACAGAATTTGATTAAGGGAAGGCACAGCTaGGAAATAAGTACCCGCTGT +
Preference number: 4 (lower is better)
Translates to: GTSGGHPVQPFVPRQNLIKGRHS*EISTRC
Trigger: ACAGCGGGTACTTATTTCTCAGCTGTGCCTTCCCTT...AATCAAATTCTGTCTGGGGACGAAGGGTTGGACGGGATGACCTCCAGAAGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR TCA 90 bp AATCAGCTTTCTTCTTTGTGCTCACAGGGCCTAGAGGAGCCTCCAGGCAGGGATCTGGTCAAAACACTCTaGGAGTGCTACCTCTCTGAG +
Preference number: 4 (lower is better)
Translates to: NQLSSLCSQGLEEPPGRDLVKTL*ECYLSE
Trigger: CTCAGAGAGGTAGCACTCTCAGAGTGTTTTGACCAG...ATCCCTGCCTGGAGGCTCCTCTAGGCCCTGTGAGCACAAAGAAGAAAGCTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR TCA 90 bp AACAGGGACCTCGGGGTTGAAGAGTCATGCCATAAGTCAGTCAACATGGAACCATGCCAGCTTGGCTGTTaGAGCCCAAGTAACTGGCAG +
Preference number: 4 (lower is better)
Translates to: NRDLGVEESCHKSVNMEPCQLGC*SPSNWQ
Trigger: CTGCCAGTTACTTGGGCTTCAACAGCCAAGCTGGCA...TGGTTCCATGTTGACTGACTTATGGCATGACTCTTCAACCCCGAGGTCCCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR TCA 90 bp GCCCACAAATGTCCTCGTCCCATTCTCCATGCAAGCATTGGTCCTCTGGCAAATTCTCACACTGGATGCTaGCCCCCAAAAGCAGCATTG +
Preference number: 4 (lower is better)
Translates to: AHKCPRPILHASIGPLANSHTGC*PPKAAL
Trigger: CAATGCTGCTTTTGGGGGTCAGCATCCAGTGTGAGA...ATTTGCCAGAGGACCAATGCTTGCATGGAGAATGGGACGAGGACATTTGTGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp GGAAGACACAACTCATTGGTGTCCAAAGGAATATCCATTAGAATATCAGTGGATCTCCCGCGGCGCTGCTaGAGGCAGGAGTTCCCTGCG +
Preference number: 4 (lower is better)
Translates to: GRHNSLVSKGISIRISVDLPRRC*RQEFPA
Trigger: CGCAGGGAACTCCTGCCTGCAGCAGCGCCGCGGGAG...ATCCACTGATATTCTAATGGATATTCCTTTGGACACCAATGAGTTGTGTCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527388.5
CDS-3UTR GCA 90 bp ACGACTCGTGTGCTTTTAACAGATCTTCAGAGTGAAGGTGCTGAGAGTGGACAGGGTTCCAATGGCTGCTaGTTAGGTGACGGCTGCCCA +
Preference number: 4 (lower is better)
Translates to: TTRVLLTDLQSEGAESGQGSNGC*LGDGCP
Trigger: TGGGCAGCCGTCACCTAAGCAGCAGCCATTGGAACC...CTGTCCACTCTCAGCACCTTCACTCTGAAGATCTGTTAAAAGCACACGAGTCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525810.5
ENST00000527388.5
CDS-3UTR GCA 90 bp ACAGTTATTACAGCTGTTTACAGCTCCAACTCCAAAGGGGAGCCTGCTGGTTCTGGAGTCAGAGTGGAGTaGGGCTTCTCCCGGTTCCAA +
Preference number: 4 (lower is better)
Translates to: TVITAVYSSNSKGEPAGSGVRVE*GFSRFQ
Trigger: TTGGAACCGGGAGAAGCCGCACTCCACTCTGACTCC...AGAACCAGCAGGCTCCCCTTTGGAGTTGGAGCTGTAAACAGCTGTAATAACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338901.4
CDS-3UTR GCA 90 bp GAGACGACTCGTGTGCTTTTAACAGATCTTCAGAGTGAAGGTGCTGAGAGTGGAGGAGTCAGAGTGGAGTaGGGCTTCTCCCGGTTCCAA +
Preference number: 4 (lower is better)
Translates to: ETTRVLLTDLQSEGAESGGVRVE*GFSRFQ
Trigger: TTGGAACCGGGAGAAGCCGCACTCCACTCTGACTCC...TCCACTCTCAGCACCTTCACTCTGAAGATCTGTTAAAAGCACACGAGTCGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525810.5
ENST00000527388.5
CDS-3UTR GCA 90 bp CTCACTCCACAGCAGCACTTAGAGGTTCTGGGAGTCCTGGCTCCCAAACCCAGGTTTAACTGGGCCATCTaGTCCTTCATTGCTTTTGCT +
Preference number: 4 (lower is better)
Translates to: LTPQQHLEVLGVLAPKPRFNWAI*SFIAFA
Trigger: AGCAAAAGCAATGAAGGAGCAGATGGCCCAGTTAAA...CCTGGGTTTGGGAGCCAGGACTCCCAGAACCTCTAAGTGCTGCTGTGGAGTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp AACATAAAGGCCACAAGTTCTGTGGGTCCCAGAGGCCTGCTGCTCCAACATTGTTGTTGTAGTTGGTCTTaGCCGTCTCGATGCTGCGTG +
Preference number: 4 (lower is better)
Translates to: NIKATSSVGPRGLLLQHCCCSWS*PSRCCV
Trigger: CACGCAGCATCGAGACGGGCAAGACCAACTACAACA...ACAATGTTGGAGCAGCAGGCCTCTGGGACCCACAGAACTTGTGGCCTTTATGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp CAGACTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTGGATCTAGCACCCAGAAACCAAAGAACGTGGTGTaGTTGCTCATGTTGATGGAG +
Preference number: 4 (lower is better)
Translates to: QTVQGWPSQVWAGSSTQKPKNVV*LLMLME
Trigger: CTCCATCAACATGAGCAAGCACACCACGTTCTTTGG...TTTCTGGGTGCTAGATCCAGCCCAAACCTGGGAAGGCCAGCCTTGTACAGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp AGGCAGCATTACAGTAGCCTAAGGACTTGCTGGCACTGGGCCAGTCTTGTGCTTTTGCTTTCTCTGGCCTaGTGCCCTGGATCCTCATTT +
Preference number: 4 (lower is better)
Translates to: RQHYSSLRTCWHWASLVLLLSLA*CPGSSF
Trigger: AAATGAGGATCCAGGGCAGCAGGCCAGAGAAAGCAA...AAGCACAAGACTGGCCCAGTGCCAGCAAGTCCTTAGGCTACTGTAATGCTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp GGGACTTCTGGAGGTCATCCCGTCCAACCCTTCGTCCCCAGACAGAATTTGATTTTGCTTTCTCTGGCCTaGTGCCCTGGATCCTCATTT +
Preference number: 4 (lower is better)
Translates to: GTSGGHPVQPFVPRQNLILLSLA*CPGSSF
Trigger: AAATGAGGATCCAGGGCAGCAGGCCAGAGAAAGCAA...AATCAAATTCTGTCTGGGGACGAAGGGTTGGACGGGATGACCTCCAGAAGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp GCATCTCTGGGTTTCTCCCCGGAACTCTCAAGGATTTCAGTTCCCAATTACCACGCACTCCAACCCTCCTaGAGGCCACAGTATAGAGCA +
Preference number: 4 (lower is better)
Translates to: ASLGFSPELSRISVPNYHALQPS*RPQYRA
Trigger: TGCTCTATACTGTGGCCTGCAGGAGGGTTGGAGTGC...GTGGTAATTGGGAACTGAAATCCTTGAGAGTTCCGGGGAGAAACCCAGAGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp CCAGCTGTCTTTTGTGCCAGCTTGGCTGTTGAAGCCCAAGTAACTGGCAGAGACGCGGTGACAATGCTCTaGTGTGGCTTTTTGAAGCCA +
Preference number: 4 (lower is better)
Translates to: PAVFCASLAVEAQVTGRDAVTML*CGFLKP
Trigger: TGGCTTCAAAAAGCCACAGCAGAGCATTGTCACCGC...GTCTCTGCCAGTTACTTGGGCTTCAACAGCCAAGCTGGCACAAAAGACAGCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp AACAGGGACCTCGGGGTTGAAGAGTCATGCCATAAGTCAGTCAACATGGAACCACAGATCCCTGCTCAGTaGCTAGACACTGGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: NRDLGVEESCHKSVNMEPQIPAQ*LDTGFS
Trigger: GGAGAAGCCAGTGTCTAGGCACTGAGCAGGGATCTG...TGGTTCCATGTTGACTGACTTATGGCATGACTCTTCAACCCCGAGGTCCCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp GGGACTTCTGGAGGTCATCCCGTCCAACCCTTCGTCCCCAGACAGAATTTGATTCACCTCACCTTGGGTTaGAAGGCTGTCATTAGCAAC +
Preference number: 4 (lower is better)
Translates to: GTSGGHPVQPFVPRQNLIHLTLG*KAVISN
Trigger: GTTGCTAATGACAGCCTTGCAACCCAAGGTGAGGTG...AATCAAATTCTGTCTGGGGACGAAGGGTTGGACGGGATGACCTCCAGAAGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp AATCAGCTTTCTTCTTTGTGCTCACAGGGCCTAGAGGAGCCTCCAGGCAGGGATCACCTCACCTTGGGTTaGAAGGCTGTCATTAGCAAC +
Preference number: 4 (lower is better)
Translates to: NQLSSLCSQGLEEPPGRDHLTLG*KAVISN
Trigger: GTTGCTAATGACAGCCTTGCAACCCAAGGTGAGGTG...ATCCCTGCCTGGAGGCTCCTCTAGGCCCTGTGAGCACAAAGAAGAAAGCTGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp GCCCACAAATGTCCTCGTCCCATTCTCCATGCAAGCATTGGTCCTCTGGCAAATATGTCTGACTCTTTTTaGCACAGAGCCCCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: AHKCPRPILHASIGPLANMSDSF*HRAPGS
Trigger: GCTGCCAGGGGCTCTGTGGCAAAAAGAGTCAGACAT...ATTTGCCAGAGGACCAATGCTTGCATGGAGAATGGGACGAGGACATTTGTGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp CTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTGGATCTAGCACCCAGAAACCAGGCTGCTCCAACATTGTaGCAGGAAGATTCTTCTGAA +
Preference number: 4 (lower is better)
Translates to: LYKAGLPRFGLDLAPRNQAAPTL*QEDSSE
Trigger: TTCAGAAGAATCTTCCTGGCACAATGTTGGAGCAGC...CTGGTTTCTGGGTGCTAGATCCAGCCCAAACCTGGGAAGGCCAGCCTTGTACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp GCTCTGCTGTGGCTTTTTGAAGCCAGAGTGAAGAAAGACTGGGTTAGTACAGCATGGGTCCCAGAGGCCTaGTGCTCCAACATTGTGCCA +
Preference number: 4 (lower is better)
Translates to: ALLWLFEARVKKDWVSTAWVPEA*CSNIVP
Trigger: TGGCACAATGTTGGAGCAGCAGGCCTCTGGGACCCA...TGCTGTACTAACCCAGTCTTTCTTCACTCTGGCTTCAAAAAGCCACAGCAGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp GGGTCCTACCATATGATCTGTTGGGAAGCTTGGGGTTTAGGGGAAGGTGAATTTCTGGAGGTTGGTGCTTaGTCACCACTTGGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: GSYHMICWEAWGLGEGEFLEVGA*SPLGAG
Trigger: ACCTGCCCCAAGTGGTGAGCAAGCACCAACCTCCAG...AAATTCACCTTCCCCTAAACCCCAAGCTTCCCAACAGATCATATGGTAGGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp AACATAAAGGCCACAAGTTCTGTGGGTCCCAGAGGCCTGCTGCTCCAACATTGTAGTAGCCTAAGGACTTaGTGGCACTGGGCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: NIKATSSVGPRGLLLQHCSSLRT*WHWASL
Trigger: AAGACTGGCCCAGTGCCAGCAAGTCCTTAGGCTACT...ACAATGTTGGAGCAGCAGGCCTCTGGGACCCACAGAACTTGTGGCCTTTATGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp GGAAGACACAACTCATTGGTGTCCAAAGGAATATCCATTAGAATATCAGTGGATCTGCGCGACAGTGGCTaGGCGGGACGGAGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: GRHNSLVSKGISIRISVDLRDSG*AGRSRE
Trigger: CTCCCTGCTCCGTCCCGCCCAGCCACTGTCGCGCAG...ATCCACTGATATTCTAATGGATATTCCTTTGGACACCAATGAGTTGTGTCTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527388.5
CDS-3UTR CCA 90 bp CAGAGGGAAGACACAACTCATTGGTGTCCAAAGGAATATCCATTAGAATATCAGGTTCCTGCGCGACAGTaGCTGGGCGGGACGGAGCAG +
Preference number: 4 (lower is better)
Translates to: QREDTTHWCPKEYPLEYQVPARQ*LGGTEQ
Trigger: CTGCTCCGTCCCGCCCAGCCACTGTCGCGCAGGAAC...CTGATATTCTAATGGATATTCCTTTGGACACCAATGAGTTGTGTCTTCCCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527388.5
CDS-3UTR CCA 90 bp ATCCTCACTAGAACGCCGAGGACAATCAGTCTCAAATTGCAGGTAAGTGTGAACCGCCTGGTCCCTCCCTaGTCCTGCCCTCTAAATTGG +
Preference number: 4 (lower is better)
Translates to: ILTRTPRTISLKLQVSVNRLVPP*SCPLNW
Trigger: CCAATTTAGAGGGCAGGACCAGGGAGGGACCAGGCG...GTTCACACTTACCTGCAATTTGAGACTGATTGTCCTCGGCGTTCTAGTGAGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338901.4
CDS-3UTR CCA 90 bp AACATAAAGGCCACAAGTTCTGTGGGTCCCAGAGGCCTGCTGCTCCAACATTGTTGCACCACAGCTGGCTaGTTTTCTCGAGTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: NIKATSSVGPRGLLLQHCCTTAG*FSRVPA
Trigger: AGCTGGAACTCGAGAAAACCAGCCAGCTGTGGTGCA...ACAATGTTGGAGCAGCAGGCCTCTGGGACCCACAGAACTTGTGGCCTTTATGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp TTTCAGGAACAAGAGGAGCAGACTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTAGCAAGTGTTGTAGTTaGTCTTGCCCGTCTCGATGC +
Preference number: 4 (lower is better)
Translates to: FQEQEEQTVQGWPSQVWASKCCS*SCPSRC
Trigger: GCATCGAGACGGGCAAGACCAACTACAACACTTGCT...AGCCCAAACCTGGGAAGGCCAGCCTTGTACAGTCTGCTCCTCTTGTTCCTGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp GCCCACAAATGTCCTCGTCCCATTCTCCATGCAAGCATTGGTCCTCTGGCAAATCGGACAGAGGCAAAATaGGGGGAATCTAGGATGCAG +
Preference number: 4 (lower is better)
Translates to: AHKCPRPILHASIGPLANRTEAK*GESRMQ
Trigger: CTGCATCCTAGATTCCCCCCATTTTGCCTCTGTCCG...ATTTGCCAGAGGACCAATGCTTGCATGGAGAATGGGACGAGGACATTTGTGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp CTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTGGATCTAGCACCCAGAAACCAGAACTCAAGGTCATTCTaGAAAGTCAAGCAGGCCTTG +
Preference number: 4 (lower is better)
Translates to: LYKAGLPRFGLDLAPRNQNSRSF*KVKQAL
Trigger: CAAGGCCTGCTTGACTTTCCAGAATGACCTTGAGTT...CTGGTTTCTGGGTGCTAGATCCAGCCCAAACCTGGGAAGGCCAGCCTTGTACAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp TTTCAGGAACAAGAGGAGCAGACTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTGCTTCATGTAAACCCTaGGGCTCCATCAACTGTCCT +
Preference number: 4 (lower is better)
Translates to: FQEQEEQTVQGWPSQVWAASCKP*GSINCP
Trigger: AGGACAGTTGATGGAGCCCCAGGGTTTACATGAAGC...AGCCCAAACCTGGGAAGGCCAGCCTTGTACAGTCTGCTCCTCTTGTTCCTGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp AATCAGCTTTCTTCTTTGTGCTCACAGGGCCTAGAGGAGCCTCCAGGCAGGGATGCCAAGGATGCTCCTTaGCAGGTTTCTCTTATGGTC +
Preference number: 4 (lower is better)
Translates to: NQLSSLCSQGLEEPPGRDAKDAP*QVSLMV
Trigger: GACCATAAGAGAAACCTGCCAAGGAGCATCCTTGGC...ATCCCTGCCTGGAGGCTCCTCTAGGCCCTGTGAGCACAAAGAAGAAAGCTGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp AGGCAGCATTACAGTAGCCTAAGGACTTGCTGGCACTGGGCCAGTCTTGTGCTTGCCAAGGATGCTCCTTaGCAGGTTTCTCTTATGGTC +
Preference number: 4 (lower is better)
Translates to: RQHYSSLRTCWHWASLVLAKDAP*QVSLMV
Trigger: GACCATAAGAGAAACCTGCCAAGGAGCATCCTTGGC...AAGCACAAGACTGGCCCAGTGCCAGCAAGTCCTTAGGCTACTGTAATGCTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp AAGCTAAAGAATATCCCAGACTCACATGACCACAGGTCCCAGGTTAGGCACCTGTCAGTGCCTAGACACTaGCTTCTCCTGAGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: KLKNIPDSHDHRSQVRHLSVPRH*LLLSLA
Trigger: AGCCAGGCTCAGGAGAAGCCAGTGTCTAGGCACTGA...CAGGTGCCTAACCTGGGACCTGTGGTCATGTGAGTCTGGGATATTCTTTAGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp GACTCTTTTTGCCACAGAGCCCCTGGCAGCCGAGAGGACGGGTATTACCATCGATACCATATGATCTGTTaGGAAGCTTGGGGTTTAGGG +
Preference number: 4 (lower is better)
Translates to: DSFCHRAPGSREDGYYHRYHMIC*EAWGLG
Trigger: CCCTAAACCCCAAGCTTCCCAACAGATCATATGGTA...TCGATGGTAATACCCGTCCTCTCGGCTGCCAGGGGCTCTGTGGCAAAAAGAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp AACAGGGACCTCGGGGTTGAAGAGTCATGCCATAAGTCAGTCAACATGGAACCACAGACTGTACAAGGCTaGCCTTCCCAGGTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: NRDLGVEESCHKSVNMEPQTVQG*PSQVWA
Trigger: AGCCCAAACCTGGGAAGGCCAGCCTTGTACAGTCTG...TGGTTCCATGTTGACTGACTTATGGCATGACTCTTCAACCCCGAGGTCCCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp AATCAGCTTTCTTCTTTGTGCTCACAGGGCCTAGAGGAGCCTCCAGGCAGGGATAAGGGCCAAGCAGTGTaGTTGCTTAGAAAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: NQLSSLCSQGLEEPPGRDKGQAV*LLRKGR
Trigger: CCTTCCCTTTCTAAGCAACCACACTGCTTGGCCCTT...ATCCCTGCCTGGAGGCTCCTCTAGGCCCTGTGAGCACAAAGAAGAAAGCTGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp GGGTCCTACCATATGATCTGTTGGGAAGCTTGGGGTTTAGGGGAAGGTGAATTTGGCCAGACACATGCCTaGAGTTCACCTCACCTTGGG +
Preference number: 4 (lower is better)
Translates to: GSYHMICWEAWGLGEGEFGQTHA*SSPHLG
Trigger: CCCAAGGTGAGGTGAACTCCAGGCATGTGTCTGGCC...AAATTCACCTTCCCCTAAACCCCAAGCTTCCCAACAGATCATATGGTAGGACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp CAGACTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTGGATCTAGCACCCAGAAAGGCTGGTTCCTAGGATaGGTGAAAGAACATAAAGGC +
Preference number: 4 (lower is better)
Translates to: QTVQGWPSQVWAGSSTQKGWFLG*VKEHKG
Trigger: GCCTTTATGTTCTTTCACCCATCCTAGGAACCAGCC...TTTCTGGGTGCTAGATCCAGCCCAAACCTGGGAAGGCCAGCCTTGTACAGTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp GACTCTTTTTGCCACAGAGCCCCTGGCAGCCGAGAGGACGGGTATTACCATCGATCTCCATGCAAGCATTaGTCCTCTGGCAAATTCACA +
Preference number: 4 (lower is better)
Translates to: DSFCHRAPGSREDGYYHRSPCKH*SSGKFT
Trigger: TGTGAATTTGCCAGAGGACCAATGCTTGCATGGAGA...TCGATGGTAATACCCGTCCTCTCGGCTGCCAGGGGCTCTGTGGCAAAAAGAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp AAGCTAAAGAATATCCCAGACTCACATGACCACAGGTCCCAGGTTAGGCACCTGTGCTTGCTCACCACTTaGGGCAGGTCATCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: KLKNIPDSHDHRSQVRHLCLLTT*GRSSSL
Trigger: GAGGGAAGATGACCTGCCCCAAGTGGTGAGCAAGCA...CAGGTGCCTAACCTGGGACCTGTGGTCATGTGAGTCTGGGATATTCTTTAGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp GCATCTCTGGGTTTCTCCCCGGAACTCTCAAGGATTTCAGTTCCCAATTACCACGCTGAGTCTGGAGGTTaGTGCTTGCTCACCACTTGG +
Preference number: 4 (lower is better)
Translates to: ASLGFSPELSRISVPNYHAESGG*CLLTTW
Trigger: CCAAGTGGTGAGCAAGCACCAACCTCCAGACTCAGC...GTGGTAATTGGGAACTGAAATCCTTGAGAGTTCCGGGGAGAAACCCAGAGATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp AGGCAGCATTACAGTAGCCTAAGGACTTGCTGGCACTGGGCCAGTCTTGTGCTTCACAGTATCTCACACTaGATGCTGACCCCCAAAAGC +
Preference number: 4 (lower is better)
Translates to: RQHYSSLRTCWHWASLVLHSISH*MLTPKS
Trigger: GCTTTTGGGGGTCAGCATCCAGTGTGAGATACTGTG...AAGCACAAGACTGGCCCAGTGCCAGCAAGTCCTTAGGCTACTGTAATGCTGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp GGGACTTCTGGAGGTCATCCCGTCCAACCCTTCGTCCCCAGACAGAATTTGATTCACAGTATCTCACACTaGATGCTGACCCCCAAAAGC +
Preference number: 4 (lower is better)
Translates to: GTSGGHPVQPFVPRQNLIHSISH*MLTPKS
Trigger: GCTTTTGGGGGTCAGCATCCAGTGTGAGATACTGTG...AATCAAATTCTGTCTGGGGACGAAGGGTTGGACGGGATGACCTCCAGAAGTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp GAGACGACTCGTGTGCTTTTAACAGATCTTCAGAGTGAAGGTGCTGAGAGTGGAACTCATTGGTGTCCCTaGTGCCCGTCCTGGGAGTCA +
Preference number: 4 (lower is better)
Translates to: ETTRVLLTDLQSEGAESGTHWCP*CPSWES
Trigger: TGACTCCCAGGACGGGCACCAGGGACACCAATGAGT...TCCACTCTCAGCACCTTCACTCTGAAGATCTGTTAAAAGCACACGAGTCGTCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525810.5
CDS-3UTR TCA 90 bp GGAAGACACAACTCATTGGTGTCCAAAGGAATATCCATTAGAATATCAGTGGATAGACACCCACTCTCTTaGGGCCCGGGAGCCGCTGCG +
Preference number: 4 (lower is better)
Translates to: GRHNSLVSKGISIRISVDRHPLS*GPGAAA
Trigger: CGCAGCGGCTCCCGGGCCTCAAGAGAGTGGGTGTCT...ATCCACTGATATTCTAATGGATATTCCTTTGGACACCAATGAGTTGTGTCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527388.5
CDS-3UTR TCA 90 bp ACTTGCTGGCACTGGGCCAGTCTTGTGCTTTCCAGTCCAGAGGCTAGAGCTGGGCTGAAAGATCATTCTTaGCTTGAATTGCTGACCCTT +
Preference number: 4 (lower is better)
Translates to: TCWHWASLVLSSPEARAGLKDHS*LELLTL
Trigger: AAGGGTCAGCAATTCAAGTCAAGAATGATCTTTCAG...CCCAGCTCTAGCCTCTGGACTGGAAAGCACAAGACTGGCCCAGTGCCAGCAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR TCA 90 bp CTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTGGATCTAGCACCCAGAAACCAGATTGAGCACTCCACCTaGAAGATCATTCTTGACTTG +
Preference number: 4 (lower is better)
Translates to: LYKAGLPRFGLDLAPRNQIEHST*KIILDL
Trigger: CAAGTCAAGAATGATCTTTCAGGTGGAGTGCTCAAT...CTGGTTTCTGGGTGCTAGATCCAGCCCAAACCTGGGAAGGCCAGCCTTGTACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR TCA 90 bp GCCCACAAATGTCCTCGTCCCATTCTCCATGCAAGCATTGGTCCTCTGGCAAATTTTAGAAGGCTGTGGTaGGGGCTAAGAGTCACAGGT +
Preference number: 4 (lower is better)
Translates to: AHKCPRPILHASIGPLANFRRLW*GLRVTG
Trigger: ACCTGTGACTCTTAGCCCTCACCACAGCCTTCTAAA...ATTTGCCAGAGGACCAATGCTTGCATGGAGAATGGGACGAGGACATTTGTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR TCA 90 bp AACAGGGACCTCGGGGTTGAAGAGTCATGCCATAAGTCAGTCAACATGGAACCAGAGGGTCCTACCATATaGTCTGTTGGGAAGCTTGGG +
Preference number: 4 (lower is better)
Translates to: NRDLGVEESCHKSVNMEPEGPTI*SVGKLG
Trigger: CCCAAGCTTCCCAACAGATCATATGGTAGGACCCTC...TGGTTCCATGTTGACTGACTTATGGCATGACTCTTCAACCCCGAGGTCCCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR TCA 90 bp CAGACTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTGGATCTAGCACCCAGAAAATTACCATCGAGGAATaGAATCAGGCATCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: QTVQGWPSQVWAGSSTQKITIEE*NQASLG
Trigger: ACCCAGAGATGCCTGATTTCATTCCTCGATGGTAAT...TTTCTGGGTGCTAGATCCAGCCCAAACCTGGGAAGGCCAGCCTTGTACAGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR TCA 90 bp AACATAAAGGCCACAAGTTCTGTGGGTCCCAGAGGCCTGCTGCTCCAACATTGTTTGGAGGGTTCAGAATaGATCAAGGGTCCAGTGGAG +
Preference number: 4 (lower is better)
Translates to: NIKATSSVGPRGLLLQHCLEGSE*IKGPVE
Trigger: CTCCACTGGACCCTTGATTCATTCTGAACCCTCCAA...ACAATGTTGGAGCAGCAGGCCTCTGGGACCCACAGAACTTGTGGCCTTTATGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR TCA 90 bp GCCAGCTTGGCTGTTGAAGCCCAAGTAACTGGCAGAGACTCCTGCCATGCCATTTTGTCACTTTGCCAATaGCTTAGCAGCAATAGGGCT +
Preference number: 4 (lower is better)
Translates to: ASLAVEAQVTGRDSCHAILSLCQ*LSSNRA
Trigger: AGCCCTATTGCTGCTAAGTCATTGGCAAAGTGACAA...AATGGCATGGCAGGAGTCTCTGCCAGTTACTTGGGCTTCAACAGCCAAGCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR TCA 90 bp GCTCTGCTGTGGCTTTTTGAAGCCAGAGTGAAGAAAGACTGGGTTAGTACAGCATGCCAGCTTGGCTGTTaGAGCCCAAGTAACTGGCAG +
Preference number: 4 (lower is better)
Translates to: ALLWLFEARVKKDWVSTACQLGC*SPSNWQ
Trigger: CTGCCAGTTACTTGGGCTTCAACAGCCAAGCTGGCA...TGCTGTACTAACCCAGTCTTTCTTCACTCTGGCTTCAAAAAGCCACAGCAGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp TCAAGGATTTCAGTTCCCAATTACCACTTTTATTGGTTCTCTCTAGACCTCAAACCATCGGCTGGGGGCTaGAGGGACCCGTTCCTGCGC +
Preference number: 4 (lower is better)
Translates to: SRISVPNYHFYWFSLDLKPSAGG*RDPFLR
Trigger: GCGCAGGAACGGGTCCCTGCAGCCCCCAGCCGATGG...TTTGAGGTCTAGAGAGAACCAATAAAAGTGGTAATTGGGAACTGAAATCCTTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374552.9
ENST00000374553.6
CDS-3UTR GCA 90 bp CAGAGGGAAGACACAACTCATTGGTGTCCAAAGGAATATCCATTAGAATATCAGAGGCGGCTACTGTCCTaGCATCGGCTGGGGGCTGCA +
Preference number: 4 (lower is better)
Translates to: QREDTTHWCPKEYPLEYQRRLLS*HRLGAA
Trigger: TGCAGCCCCCAGCCGATGGCAGGACAGTAGCCGCCT...CTGATATTCTAATGGATATTCCTTTGGACACCAATGAGTTGTGTCTTCCCTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527388.5
CDS-3UTR GCA 90 bp CTCACTAGAACGCCGAGGACAATCAGTCTCAAATTGCAGGTAAGTGTGAACAAGGGACCGAAGACAACCTaGCCTGGGCAACTTCTCCCT +
Preference number: 4 (lower is better)
Translates to: LTRTPRTISLKLQVSVNKGPKTT*PGQLLP
Trigger: AGGGAGAAGTTGCCCAGGGCAGGTTGTCTTCGGTCC...CTTGTTCACACTTACCTGCAATTTGAGACTGATTGTCCTCGGCGTTCTAGTGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338901.4
CDS-3UTR GCA 90 bp GGGTCCTACCATATGATCTGTTGGGAAGCTTGGGGTTTAGGGGAAGGTGAATTTCCTTGGCCCTGTAGATaGACCACAGCTGGCTGGTTT +
Preference number: 4 (lower is better)
Translates to: GSYHMICWEAWGLGEGEFPWPCR*TTAGWF
Trigger: AAACCAGCCAGCTGTGGTGCATCTACAGGGCCAAGG...AAATTCACCTTCCCCTAAACCCCAAGCTTCCCAACAGATCATATGGTAGGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp GGGTCCTACCATATGATCTGTTGGGAAGCTTGGGGTTTAGGGGAAGGTGAATTTTCTCGATGCTGCGTGTaGACTGCAGGAAGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: GSYHMICWEAWGLGEGEFSRCCV*TAGRAS
Trigger: AGAAGCCCTTCCTGCAGTGCACACGCAGCATCGAGA...AAATTCACCTTCCCCTAAACCCCAAGCTTCCCAACAGATCATATGGTAGGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp AACAGGGACCTCGGGGTTGAAGAGTCATGCCATAAGTCAGTCAACATGGAACCAGAGGAGGCAGACGCCTaGGGTATAGCAAGTGTTGTA +
Preference number: 4 (lower is better)
Translates to: NRDLGVEESCHKSVNMEPEEADA*GIASVV
Trigger: TACAACACTTGCTATACCGCAGGCGTCTGCCTCCTC...TGGTTCCATGTTGACTGACTTATGGCATGACTCTTCAACCCCGAGGTCCCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp CTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTGGATCTAGCACCCAGAAACCAGTTCTCTTATGGTCTCTaGCAAAAGCACCTGCCTTTT +
Preference number: 4 (lower is better)
Translates to: LYKAGLPRFGLDLAPRNQFSYGL*QKHLPF
Trigger: AAAAGGCAGGTGCTTTTGGCAGAGACCATAAGAGAA...CTGGTTTCTGGGTGCTAGATCCAGCCCAAACCTGGGAAGGCCAGCCTTGTACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp CTGCTCCAACATTGTGCCAGGAAGATTCTTCTGAACACAAGAGCTCTAAGGCTGGCACTCCAACCCTCCTaGAGGCCACAGTATAGAGCA +
Preference number: 4 (lower is better)
Translates to: LLQHCARKILLNTRALRLALQPS*RPQYRA
Trigger: TGCTCTATACTGTGGCCTGCAGGAGGGTTGGAGTGC...CAGCCTTAGAGCTCTTGTGTTCAGAAGAATCTTCCTGGCACAATGTTGGAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp GCATCTCTGGGTTTCTCCCCGGAACTCTCAAGGATTTCAGTTCCCAATTACCACGGTTTCTGCTACAACTaGGGACTGTCCGAGGCACTT +
Preference number: 4 (lower is better)
Translates to: ASLGFSPELSRISVPNYHGFCYN*GLSEAL
Trigger: AAGTGCCTCGGACAGTCCGCAGTTGTAGCAGAAACC...GTGGTAATTGGGAACTGAAATCCTTGAGAGTTCCGGGGAGAAACCCAGAGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp TTTCAGGAACAAGAGGAGCAGACTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTGTTCTTGTTGGTTTCTaGTACAACTGCGGACTGTCC +
Preference number: 4 (lower is better)
Translates to: FQEQEEQTVQGWPSQVWAVLVGF*YNCGLS
Trigger: GGACAGTCCGCAGTTGTAGCAGAAACCAACAAGAAC...AGCCCAAACCTGGGAAGGCCAGCCTTGTACAGTCTGCTCCTCTTGTTCCTGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp ACTTGCTGGCACTGGGCCAGTCTTGTGCTTTCCAGTCCAGAGGCTAGAGCTGGGTCAAATTCCACACAATaGTGTGGTGTAATGGAACAG +
Preference number: 4 (lower is better)
Translates to: TCWHWASLVLSSPEARAGSNSTQ*CGVMEQ
Trigger: CTGTTCCATTACACCACAGCATTGTGTGGAATTTGA...CCCAGCTCTAGCCTCTGGACTGGAAAGCACAAGACTGGCCCAGTGCCAGCAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp AACAGGGACCTCGGGGTTGAAGAGTCATGCCATAAGTCAGTCAACATGGAACCATCGTCCCATTCTCCATaGAAGCATTGGTCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: NRDLGVEESCHKSVNMEPSSHSP*KHWSSG
Trigger: GCCAGAGGACCAATGCTTGCATGGAGAATGGGACGA...TGGTTCCATGTTGACTGACTTATGGCATGACTCTTCAACCCCGAGGTCCCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp TTTCAGGAACAAGAGGAGCAGACTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTCAAACCTCTGTCATCTaGTTGCCCACAAATGTCCTC +
Preference number: 4 (lower is better)
Translates to: FQEQEEQTVQGWPSQVWAQTSVI*LPTNVL
Trigger: GAGGACATTTGTGGGCAAGCAGATGACAGAGGTTTG...AGCCCAAACCTGGGAAGGCCAGCCTTGTACAGTCTGCTCCTCTTGTTCCTGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp GCATCTCTGGGTTTCTCCCCGGAACTCTCAAGGATTTCAGTTCCCAATTACCACCTAGAGCTGGGAGAATaGCTTGGGAGGAGGAAGAGT +
Preference number: 4 (lower is better)
Translates to: ASLGFSPELSRISVPNYHLELGE*LGRRKS
Trigger: ACTCTTCCTCCTCCCAAGGCATTCTCCCAGCTCTAG...GTGGTAATTGGGAACTGAAATCCTTGAGAGTTCCGGGGAGAAACCCAGAGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp GCATCTCTGGGTTTCTCCCCGGAACTCTCAAGGATTTCAGTTCCCAATTACCACAAGCAGCATTGGGCCTaGTCCAGGCCATTCTCACAA +
Preference number: 4 (lower is better)
Translates to: ASLGFSPELSRISVPNYHKQHWA*SRPFSQ
Trigger: TTGTGAGAATGGCCTGGAGCAGGCCCAATGCTGCTT...GTGGTAATTGGGAACTGAAATCCTTGAGAGTTCCGGGGAGAAACCCAGAGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp TCAAGGATTTCAGTTCCCAATTACCACTTTTATTGGTTCTCTCTAGACCTCAAACTGCGCGACAGTGGCTaGGCGGGACGGAGCAGGGAG +
Preference number: 4 (lower is better)
Translates to: SRISVPNYHFYWFSLDLKLRDSG*AGRSRE
Trigger: CTCCCTGCTCCGTCCCGCCCAGCCACTGTCGCGCAG...TTTGAGGTCTAGAGAGAACCAATAAAAGTGGTAATTGGGAACTGAAATCCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374552.9
ENST00000374553.6
CDS-3UTR CCA 90 bp CAGAGGGAAGACACAACTCATTGGTGTCCAAAGGAATATCCATTAGAATATCAGCCTCCGGGTAGCCCATaGCCTCCGGAGACACCCACT +
Preference number: 4 (lower is better)
Translates to: QREDTTHWCPKEYPLEYQPPGSP*PPETPT
Trigger: AGTGGGTGTCTCCGGAGGCCATGGGCTACCCGGAGG...CTGATATTCTAATGGATATTCCTTTGGACACCAATGAGTTGTGTCTTCCCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527388.5
CDS-3UTR CCA 90 bp CTGAGAGACCCTGGTAGTATCAAAGTCTCTAAGGTATGGTGGAAAGAGATAAGGATCTGGTGCCCGTCCTaGGAGTCAGAGTGGAGTGCG +
Preference number: 4 (lower is better)
Translates to: LRDPGSIKVSKVWWKEIRIWCPS*ESEWSA
Trigger: CGCACTCCACTCTGACTCCCAGGACGGGCACCAGAT...CCTTATCTCTTTCCACCATACCTTAGAGACTTTGATACTACCAGGGTCTCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374552.9
ENST00000374553.6
CDS-3UTR CCA 90 bp GCTCTGCTGTGGCTTTTTGAAGCCAGAGTGAAGAAAGACTGGGTTAGTACAGCATTCAATAGGGCCATCTaGTGCCCGTCCTGGGAGTCA +
Preference number: 4 (lower is better)
Translates to: ALLWLFEARVKKDWVSTAFNRAI*CPSWES
Trigger: TGACTCCCAGGACGGGCACCAGATGGCCCTATTGAA...TGCTGTACTAACCCAGTCTTTCTTCACTCTGGCTTCAAAAAGCCACAGCAGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374552.9
ENST00000374553.6
CDS-3UTR CCA 90 bp CAAACTTCCCAAAGCCCAGCAAGCTGCCACGGTGTGGCTGTCAGCTGGAGTGGGTTCTTCTTCAGAGTATaGCTTTTCATCAGGGAAGAA +
Preference number: 4 (lower is better)
Translates to: QTSQSPASCHGVAVSWSGFFFRV*LFIREE
Trigger: TTCTTCCCTGATGAAAAGCCATACTCTGAAGAAGAA...CCCACTCCAGCTGACAGCCACACCGTGGCAGCTTGCTGGGCTTTGGGAAGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp CCAGCTGTCTTTTGTGCCAGCTTGGCTGTTGAAGCCCAAGTAACTGGCAGAGACTCACCCTGGAGTCACTaGGGAATAAATAACACTGGG +
Preference number: 4 (lower is better)
Translates to: PAVFCASLAVEAQVTGRDSPWSH*GINNTG
Trigger: CCCAGTGTTATTTATTCCCCAGTGACTCCAGGGTGA...GTCTCTGCCAGTTACTTGGGCTTCAACAGCCAAGCTGGCACAAAAGACAGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp AATCAGCTTTCTTCTTTGTGCTCACAGGGCCTAGAGGAGCCTCCAGGCAGGGATTCACCCTGGAGTCACTaGGGAATAAATAACACTGGG +
Preference number: 4 (lower is better)
Translates to: NQLSSLCSQGLEEPPGRDSPWSH*GINNTG
Trigger: CCCAGTGTTATTTATTCCCCAGTGACTCCAGGGTGA...ATCCCTGCCTGGAGGCTCCTCTAGGCCCTGTGAGCACAAAGAAGAAAGCTGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp AACATAAAGGCCACAAGTTCTGTGGGTCCCAGAGGCCTGCTGCTCCAACATTGTTCTGGCCTGCTGCCCTaGATCCTCATTTTAGTGCAA +
Preference number: 4 (lower is better)
Translates to: NIKATSSVGPRGLLLQHCSGLLP*ILILVQ
Trigger: TTGCACTAAAATGAGGATCCAGGGCAGCAGGCCAGA...ACAATGTTGGAGCAGCAGGCCTCTGGGACCCACAGAACTTGTGGCCTTTATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp GACTCTTTTTGCCACAGAGCCCCTGGCAGCCGAGAGGACGGGTATTACCATCGAAGAGTGAAGAAAGACTaGGTTAGTACAGCATCAGCT +
Preference number: 4 (lower is better)
Translates to: DSFCHRAPGSREDGYYHRRVKKD*VSTASA
Trigger: AGCTGATGCTGTACTAACCCAGTCTTTCTTCACTCT...TCGATGGTAATACCCGTCCTCTCGGCTGCCAGGGGCTCTGTGGCAAAAAGAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp CTGCTCCAACATTGTGCCAGGAAGATTCTTCTGAACACAAGAGCTCTAAGGCTGTCAGTGCCTAGACACTaGCTTCTCCTGAGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: LLQHCARKILLNTRALRLSVPRH*LLLSLA
Trigger: AGCCAGGCTCAGGAGAAGCCAGTGTCTAGGCACTGA...CAGCCTTAGAGCTCTTGTGTTCAGAAGAATCTTCCTGGCACAATGTTGGAGCAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp GCCCACAAATGTCCTCGTCCCATTCTCCATGCAAGCATTGGTCCTCTGGCAAATAAGGGCCAAGCAGTGTaGTTGCTTAGAAAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: AHKCPRPILHASIGPLANKGQAV*LLRKGR
Trigger: CCTTCCCTTTCTAAGCAACCACACTGCTTGGCCCTT...ATTTGCCAGAGGACCAATGCTTGCATGGAGAATGGGACGAGGACATTTGTGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp GGGACTTCTGGAGGTCATCCCGTCCAACCCTTCGTCCCCAGACAGAATTTGATTGAGTTCACCTCACCTTaGGTTGCAAGGCTGTCATTA +
Preference number: 4 (lower is better)
Translates to: GTSGGHPVQPFVPRQNLIEFTSP*VARLSL
Trigger: TAATGACAGCCTTGCAACCCAAGGTGAGGTGAACTC...AATCAAATTCTGTCTGGGGACGAAGGGTTGGACGGGATGACCTCCAGAAGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp AATCAGCTTTCTTCTTTGTGCTCACAGGGCCTAGAGGAGCCTCCAGGCAGGGATAGGAGTGGTTCTTGTTaGTTTCTGCTACAACTGCGG +
Preference number: 4 (lower is better)
Translates to: NQLSSLCSQGLEEPPGRDRSGSC*FLLQLR
Trigger: CCGCAGTTGTAGCAGAAACCAACAAGAACCACTCCT...ATCCCTGCCTGGAGGCTCCTCTAGGCCCTGTGAGCACAAAGAAGAAAGCTGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp GACTCTTTTTGCCACAGAGCCCCTGGCAGCCGAGAGGACGGGTATTACCATCGACCAAACATGAAGGAGTaGTTCTTGTTGGTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: DSFCHRAPGSREDGYYHRPNMKE*FLLVSA
Trigger: AGCAGAAACCAACAAGAACCACTCCTTCATGTTTGG...TCGATGGTAATACCCGTCCTCTCGGCTGCCAGGGGCTCTGTGGCAAAAAGAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp TTTCAGGAACAAGAGGAGCAGACTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTGGCTGGTTCCTAGGATaGGTGAAAGAACATAAAGGC +
Preference number: 4 (lower is better)
Translates to: FQEQEEQTVQGWPSQVWAGWFLG*VKEHKG
Trigger: GCCTTTATGTTCTTTCACCCATCCTAGGAACCAGCC...AGCCCAAACCTGGGAAGGCCAGCCTTGTACAGTCTGCTCCTCTTGTTCCTGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp CAGACTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTGGATCTAGCACCCAGAAACATCCCCTCCATGTCTaGAGAATAGAATGGTATCAG +
Preference number: 4 (lower is better)
Translates to: QTVQGWPSQVWAGSSTQKHPLHV*RIEWYQ
Trigger: CTGATACCATTCTATTCTCCAGACATGGAGGGGATG...TTTCTGGGTGCTAGATCCAGCCCAAACCTGGGAAGGCCAGCCTTGTACAGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp CAGACTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTGGATCTAGCACCCAGAAATCTCCATGCAAGCATTaGTCCTCTGGCAAATTCACA +
Preference number: 4 (lower is better)
Translates to: QTVQGWPSQVWAGSSTQKSPCKH*SSGKFT
Trigger: TGTGAATTTGCCAGAGGACCAATGCTTGCATGGAGA...TTTCTGGGTGCTAGATCCAGCCCAAACCTGGGAAGGCCAGCCTTGTACAGTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp GCTCTGCTGTGGCTTTTTGAAGCCAGAGTGAAGAAAGACTGGGTTAGTACAGCAAGCCTAAGGACTTGCTaGCACTGGGCCAGTCTTGTG +
Preference number: 4 (lower is better)
Translates to: ALLWLFEARVKKDWVSTASLRTC*HWASLV
Trigger: CACAAGACTGGCCCAGTGCCAGCAAGTCCTTAGGCT...TGCTGTACTAACCCAGTCTTTCTTCACTCTGGCTTCAAAAAGCCACAGCAGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp GAGACGACTCGTGTGCTTTTAACAGATCTTCAGAGTGAAGGTGCTGAGAGTGGAGAAGACACAACTCATTaGTGTCCCTGGTGCCCGTCC +
Preference number: 4 (lower is better)
Translates to: ETTRVLLTDLQSEGAESGEDTTH*CPWCPS
Trigger: GGACGGGCACCAGGGACACCAATGAGTTGTGTCTTC...TCCACTCTCAGCACCTTCACTCTGAAGATCTGTTAAAAGCACACGAGTCGTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525810.5
3UTR CAA 72 bp GCTGGCCTTTCAGATAAGGCCTGGCCTAACGTCCACTaGGGTTGCAGCAAACTTGAACAAAATCCCTCTGTC +
Preference number: 4 (lower is better)
Translates to: AGLSDKAWPNVH*GCSKLEQNPSV
Trigger: GACAGAGGGATTTTGTTCAAGTTTGCTGCAACCCAAGTGGACGTTAGGCCAGGCCTTATCTGAAAGGCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR CAA 72 bp AAATTCCACACAATGCTGTGGTGTAATGGAACAGCTTaGGAGTCAGACCTGGCTGAAGCTCCAGGTCTGCGG +
Preference number: 4 (lower is better)
Translates to: KFHTMLWCNGTA*ESDLAEAPGLR
Trigger: CCGCAGACCTGGAGCTTCAGCCAGGTCTGACTCCAAAGCTGTTCCATTACACCACAGCATTGTGTGGAATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR CAA 72 bp AAGTTCTGTGGGTCCCAGAGGCCTGCTGCTCCAACATaGTGCCAGGAAGATTCTTCTGAACACAAGAGCTCT +
Preference number: 4 (lower is better)
Translates to: KFCGSQRPAAPT*CQEDSSEHKSS
Trigger: AGAGCTCTTGTGTTCAGAAGAATCTTCCTGGCACAATGTTGGAGCAGCAGGCCTCTGGGACCCACAGAACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR TCA 90 bp CAGAGGGAAGACACAACTCATTGGTGTCCAAAGGAATATCCATTAGAATATCAGGACGGCTGCCCAAGGTaGCTGGTGATGGGGCTGTCA +
Preference number: 4 (lower is better)
Translates to: QREDTTHWCPKEYPLEYQDGCPR*LVMGLS
Trigger: TGACAGCCCCATCACCAGTCACCTTGGGCAGCCGTC...CTGATATTCTAATGGATATTCCTTTGGACACCAATGAGTTGTGTCTTCCCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527388.5
CDS-3UTR TCA 90 bp AACAGGGACCTCGGGGTTGAAGAGTCATGCCATAAGTCAGTCAACATGGAACCATGCGAGACCAGTCATTaGGCACTCCACCTGAAAGAT +
Preference number: 4 (lower is better)
Translates to: NRDLGVEESCHKSVNMEPCETSH*ALHLKD
Trigger: ATCTTTCAGGTGGAGTGCTCAATGACTGGTCTCGCA...TGGTTCCATGTTGACTGACTTATGGCATGACTCTTCAACCCCGAGGTCCCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR TCA 90 bp AGGCAGCATTACAGTAGCCTAAGGACTTGCTGGCACTGGGCCAGTCTTGTGCTTAAAATGAGAGTCATGTaGCCCAAGTACGGATTCAGG +
Preference number: 4 (lower is better)
Translates to: RQHYSSLRTCWHWASLVLKMRVM*PKYGFR
Trigger: CCTGAATCCGTACTTGGGTCACATGACTCTCATTTT...AAGCACAAGACTGGCCCAGTGCCAGCAAGTCCTTAGGCTACTGTAATGCTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR TCA 90 bp GGGACTTCTGGAGGTCATCCCGTCCAACCCTTCGTCCCCAGACAGAATTTGATTTCTGCTGTGGCTTTTTaGAGCCAGAGTGAAGAAAGA +
Preference number: 4 (lower is better)
Translates to: GTSGGHPVQPFVPRQNLISAVAF*SQSEER
Trigger: TCTTTCTTCACTCTGGCTTCAAAAAGCCACAGCAGA...AATCAAATTCTGTCTGGGGACGAAGGGTTGGACGGGATGACCTCCAGAAGTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR TCA 90 bp AAGCTAAAGAATATCCCAGACTCACATGACCACAGGTCCCAGGTTAGGCACCTGAAGGGAAGGCACAGCTaGGAAATAAGTACCCGCTGT +
Preference number: 4 (lower is better)
Translates to: KLKNIPDSHDHRSQVRHLKGRHS*EISTRC
Trigger: ACAGCGGGTACTTATTTCTCAGCTGTGCCTTCCCTT...CAGGTGCCTAACCTGGGACCTGTGGTCATGTGAGTCTGGGATATTCTTTAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR TCA 90 bp AAGCTAAAGAATATCCCAGACTCACATGACCACAGGTCCCAGGTTAGGCACCTGCTGGTCAAAACACTCTaGGAGTGCTACCTCTCTGAG +
Preference number: 4 (lower is better)
Translates to: KLKNIPDSHDHRSQVRHLLVKTL*ECYLSE
Trigger: CTCAGAGAGGTAGCACTCTCAGAGTGTTTTGACCAG...CAGGTGCCTAACCTGGGACCTGTGGTCATGTGAGTCTGGGATATTCTTTAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR TCA 90 bp AATCAGCTTTCTTCTTTGTGCTCACAGGGCCTAGAGGAGCCTCCAGGCAGGGATATTACCATCGAGGAATaGAATCAGGCATCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: NQLSSLCSQGLEEPPGRDITIEE*NQASLG
Trigger: ACCCAGAGATGCCTGATTTCATTCCTCGATGGTAAT...ATCCCTGCCTGGAGGCTCCTCTAGGCCCTGTGAGCACAAAGAAGAAAGCTGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR TCA 90 bp GAACTCTCAAGGATTTCAGTTCCCAATTACCACTTTTATTGGTTCTCTCTAGACGCCTGGCCAGGCTCCTaGAGGGGGCCAAGTACTTCC +
Preference number: 4 (lower is better)
Translates to: ELSRISVPNYHFYWFSLDAWPGS*RGPSTS
Trigger: GGAAGTACTTGGCCCCCTTCAGGAGCCTGGCCAGGC...GTCTAGAGAGAACCAATAAAAGTGGTAATTGGGAACTGAAATCCTTGAGAGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp TGGGTTTCTCCCCGGAACTCTCAAGGATTTCAGTTCCCAATTACCACTTTTATTCCCGGTTCCAATGGCTaGTGCTTAGGTGACGGCTGC +
Preference number: 4 (lower is better)
Translates to: WVSPRNSQGFQFPITTFIPGSNG*CLGDGC
Trigger: GCAGCCGTCACCTAAGCAGCAGCCATTGGAACCGGG...AATAAAAGTGGTAATTGGGAACTGAAATCCTTGAGAGTTCCGGGGAGAAACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374552.9
ENST00000374553.6
CDS-3UTR GCA 90 bp CTGAGAGACCCTGGTAGTATCAAAGTCTCTAAGGTATGGTGGAAAGAGATAAGGGGAGTCAGAGTGGAGTaGGGCTTCTCCCGGTTCCAA +
Preference number: 4 (lower is better)
Translates to: LRDPGSIKVSKVWWKEIRGVRVE*GFSRFQ
Trigger: TTGGAACCGGGAGAAGCCGCACTCCACTCTGACTCC...CCTTATCTCTTTCCACCATACCTTAGAGACTTTGATACTACCAGGGTCTCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374552.9
ENST00000374553.6
CDS-3UTR GCA 90 bp TGGGTTTCTCCCCGGAACTCTCAAGGATTTCAGTTCCCAATTACCACTTTTATTTGCCCGTCTCGATGCTaGGTGTGCACTGCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: WVSPRNSQGFQFPITTFICPSRC*VCTAGR
Trigger: CCTTCCTGCAGTGCACACGCAGCATCGAGACGGGCA...AATAAAAGTGGTAATTGGGAACTGAAATCCTTGAGAGTTCCGGGGAGAAACCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp CTGAGAGACCCTGGTAGTATCAAAGTCTCTAAGGTATGGTGGAAAGAGATAAGGTCTTGCCCGTCTCGATaGTGCGTGTGCACTGCAGGA +
Preference number: 4 (lower is better)
Translates to: LRDPGSIKVSKVWWKEIRSCPSR*CVCTAG
Trigger: TCCTGCAGTGCACACGCAGCATCGAGACGGGCAAGA...CCTTATCTCTTTCCACCATACCTTAGAGACTTTGATACTACCAGGGTCTCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp CTGCTCCAACATTGTGCCAGGAAGATTCTTCTGAACACAAGAGCTCTAAGGCTGTGTTGTAGTTGGTCTTaGCCGTCTCGATGCTGCGTG +
Preference number: 4 (lower is better)
Translates to: LLQHCARKILLNTRALRLCCSWS*PSRCCV
Trigger: CACGCAGCATCGAGACGGGCAAGACCAACTACAACA...CAGCCTTAGAGCTCTTGTGTTCAGAAGAATCTTCCTGGCACAATGTTGGAGCAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp GCTCTGCTGTGGCTTTTTGAAGCCAGAGTGAAGAAAGACTGGGTTAGTACAGCAATGGAGATGTCAGCGTaGACCATCTTGACGGCGATC +
Preference number: 4 (lower is better)
Translates to: ALLWLFEARVKKDWVSTAMEMSA*TILTAI
Trigger: GATCGCCGTCAAGATGGTGCACGCTGACATCTCCAT...TGCTGTACTAACCCAGTCTTTCTTCACTCTGGCTTCAAAAAGCCACAGCAGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp AACATAAAGGCCACAAGTTCTGTGGGTCCCAGAGGCCTGCTGCTCCAACATTGTCCAAAGAACGTGGTGTaGTTGCTCATGTTGATGGAG +
Preference number: 4 (lower is better)
Translates to: NIKATSSVGPRGLLLQHCPKNVV*LLMLME
Trigger: CTCCATCAACATGAGCAAGCACACCACGTTCTTTGG...ACAATGTTGGAGCAGCAGGCCTCTGGGACCCACAGAACTTGTGGCCTTTATGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp GCATCTCTGGGTTTCTCCCCGGAACTCTCAAGGATTTCAGTTCCCAATTACCACGCATTTCTCTGCGGCTaGAACACCAATACACCTCAC +
Preference number: 4 (lower is better)
Translates to: ASLGFSPELSRISVPNYHAFLCG*NTNTPH
Trigger: GTGAGGTGTATTGGTGTTGCAGCCGCAGAGAAATGC...GTGGTAATTGGGAACTGAAATCCTTGAGAGTTCCGGGGAGAAACCCAGAGATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp GCATCTCTGGGTTTCTCCCCGGAACTCTCAAGGATTTCAGTTCCCAATTACCACGCGGTGACAATGCTCTaGTGTGGCTTTTTGAAGCCA +
Preference number: 4 (lower is better)
Translates to: ASLGFSPELSRISVPNYHAVTML*CGFLKP
Trigger: TGGCTTCAAAAAGCCACAGCAGAGCATTGTCACCGC...GTGGTAATTGGGAACTGAAATCCTTGAGAGTTCCGGGGAGAAACCCAGAGATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp AAGCTAAAGAATATCCCAGACTCACATGACCACAGGTCCCAGGTTAGGCACCTGGCCAAGCAGTGTGGTTaGTTAGAAAGGGAAGGCACA +
Preference number: 4 (lower is better)
Translates to: KLKNIPDSHDHRSQVRHLAKQCG*LEREGT
Trigger: TGTGCCTTCCCTTTCTAAGCAACCACACTGCTTGGC...CAGGTGCCTAACCTGGGACCTGTGGTCATGTGAGTCTGGGATATTCTTTAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp GGGTCCTACCATATGATCTGTTGGGAAGCTTGGGGTTTAGGGGAAGGTGAATTTATGTGGGACAGGAACTaGTTTACCCCCTCACTCTGC +
Preference number: 4 (lower is better)
Translates to: GSYHMICWEAWGLGEGEFMWDRN*FTPSLC
Trigger: GCAGAGTGAGGGGGTAAAGCAGTTCCTGTCCCACAT...AAATTCACCTTCCCCTAAACCCCAAGCTTCCCAACAGATCATATGGTAGGACCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp GGGTCCTACCATATGATCTGTTGGGAAGCTTGGGGTTTAGGGGAAGGTGAATTTACTGGGCCAGTCTTGTaGTTTCCAGTCCAGAGGCTA +
Preference number: 4 (lower is better)
Translates to: GSYHMICWEAWGLGEGEFTGPVL*FPVQRL
Trigger: TAGCCTCTGGACTGGAAAGCACAAGACTGGCCCAGT...AAATTCACCTTCCCCTAAACCCCAAGCTTCCCAACAGATCATATGGTAGGACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp GCTCTGCTGTGGCTTTTTGAAGCCAGAGTGAAGAAAGACTGGGTTAGTACAGCAAGTAGCCTAAGGACTTaGTGGCACTGGGCCAGTCTT +
Preference number: 4 (lower is better)
Translates to: ALLWLFEARVKKDWVSTASSLRT*WHWASL
Trigger: AAGACTGGCCCAGTGCCAGCAAGTCCTTAGGCTACT...TGCTGTACTAACCCAGTCTTTCTTCACTCTGGCTTCAAAAAGCCACAGCAGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp GGAAGACACAACTCATTGGTGTCCAAAGGAATATCCATTAGAATATCAGTGGATTGTCCTGCCATCGGCTaGGGGCTGCAGGGACCCGTT +
Preference number: 4 (lower is better)
Translates to: GRHNSLVSKGISIRISVDCPAIG*GLQGPV
Trigger: AACGGGTCCCTGCAGCCCCCAGCCGATGGCAGGACA...ATCCACTGATATTCTAATGGATATTCCTTTGGACACCAATGAGTTGTGTCTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527388.5
CDS-3UTR CCA 90 bp GCTCTGCTGTGGCTTTTTGAAGCCAGAGTGAAGAAAGACTGGGTTAGTACAGCAAATTCCAGGAATCCCTaGAATTCCTGGGGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: ALLWLFEARVKKDWVSTANSRNP*NSWGSL
Trigger: CAGGGACCCCCAGGAATTCCAGGGATTCCTGGAATT...TGCTGTACTAACCCAGTCTTTCTTCACTCTGGCTTCAAAAAGCCACAGCAGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp CTGCTCCAACATTGTGCCAGGAAGATTCTTCTGAACACAAGAGCTCTAAGGCTGACCTGGAGGACCAGGTaGTCCCATAACAGTTGTTCC +
Preference number: 4 (lower is better)
Translates to: LLQHCARKILLNTRALRLTWRTR*SHNSCS
Trigger: GGAACAACTGTTATGGGACCACCTGGTCCTCCAGGT...CAGCCTTAGAGCTCTTGTGTTCAGAAGAATCTTCCTGGCACAATGTTGGAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp GCTCTGCTGTGGCTTTTTGAAGCCAGAGTGAAGAAAGACTGGGTTAGTACAGCACGGACAGAGGCAAAATaGGGGGAATCTAGGATGCAG +
Preference number: 4 (lower is better)
Translates to: ALLWLFEARVKKDWVSTARTEAK*GESRMQ
Trigger: CTGCATCCTAGATTCCCCCCATTTTGCCTCTGTCCG...TGCTGTACTAACCCAGTCTTTCTTCACTCTGGCTTCAAAAAGCCACAGCAGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp AGGCAGCATTACAGTAGCCTAAGGACTTGCTGGCACTGGGCCAGTCTTGTGCTTAACTCAAGGTCATTCTaGAAAGTCAAGCAGGCCTTG +
Preference number: 4 (lower is better)
Translates to: RQHYSSLRTCWHWASLVLNSRSF*KVKQAL
Trigger: CAAGGCCTGCTTGACTTTCCAGAATGACCTTGAGTT...AAGCACAAGACTGGCCCAGTGCCAGCAAGTCCTTAGGCTACTGTAATGCTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp GCATCTCTGGGTTTCTCCCCGGAACTCTCAAGGATTTCAGTTCCCAATTACCACGCTTCATGTAAACCCTaGGGCTCCATCAACTGTCCT +
Preference number: 4 (lower is better)
Translates to: ASLGFSPELSRISVPNYHASCKP*GSINCP
Trigger: AGGACAGTTGATGGAGCCCCAGGGTTTACATGAAGC...GTGGTAATTGGGAACTGAAATCCTTGAGAGTTCCGGGGAGAAACCCAGAGATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp AACAGGGACCTCGGGGTTGAAGAGTCATGCCATAAGTCAGTCAACATGGAACCAGGCCTAACGTCCACTTaGGTTGCAGCAAACTTGAAC +
Preference number: 4 (lower is better)
Translates to: NRDLGVEESCHKSVNMEPGLTST*VAANLN
Trigger: GTTCAAGTTTGCTGCAACCCAAGTGGACGTTAGGCC...TGGTTCCATGTTGACTGACTTATGGCATGACTCTTCAACCCCGAGGTCCCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp AAGCTAAAGAATATCCCAGACTCACATGACCACAGGTCCCAGGTTAGGCACCTGCTTTCAGATAAGGCCTaGCCTAACGTCCACTTGGGT +
Preference number: 4 (lower is better)
Translates to: KLKNIPDSHDHRSQVRHLLSDKA*PNVHLG
Trigger: ACCCAAGTGGACGTTAGGCCAGGCCTTATCTGAAAG...CAGGTGCCTAACCTGGGACCTGTGGTCATGTGAGTCTGGGATATTCTTTAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp GCCAGCTTGGCTGTTGAAGCCCAAGTAACTGGCAGAGACTCCTGCCATGCCATTAGAGTGAAGAAAGACTaGGTTAGTACAGCATCAGCT +
Preference number: 4 (lower is better)
Translates to: ASLAVEAQVTGRDSCHAIRVKKD*VSTASA
Trigger: AGCTGATGCTGTACTAACCCAGTCTTTCTTCACTCT...AATGGCATGGCAGGAGTCTCTGCCAGTTACTTGGGCTTCAACAGCCAAGCTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp CCAGCTGTCTTTTGTGCCAGCTTGGCTGTTGAAGCCCAAGTAACTGGCAGAGACGTCTGCGGCTTAAACTaGTCAAAACACTCTGAGAGT +
Preference number: 4 (lower is better)
Translates to: PAVFCASLAVEAQVTGRDVCGLN*SKHSES
Trigger: ACTCTCAGAGTGTTTTGACCAGTTTAAGCCGCAGAC...GTCTCTGCCAGTTACTTGGGCTTCAACAGCCAAGCTGGCACAAAAGACAGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp GCCAGCTTGGCTGTTGAAGCCCAAGTAACTGGCAGAGACTCCTGCCATGCCATTGTCTCTAAGGTATGGTaGAAAGAGATAAGGAGTCAC +
Preference number: 4 (lower is better)
Translates to: ASLAVEAQVTGRDSCHAIVSKVW*KEIRSH
Trigger: GTGACTCCTTATCTCTTTCCACCATACCTTAGAGAC...AATGGCATGGCAGGAGTCTCTGCCAGTTACTTGGGCTTCAACAGCCAAGCTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp GCCAGCTTGGCTGTTGAAGCCCAAGTAACTGGCAGAGACTCCTGCCATGCCATTCCTCTAGAGTTCCTTTaGAGGGTTCAGAATGAATCA +
Preference number: 4 (lower is better)
Translates to: ASLAVEAQVTGRDSCHAIPLEFL*RVQNES
Trigger: TGATTCATTCTGAACCCTCCAAAGGAACTCTAGAGG...AATGGCATGGCAGGAGTCTCTGCCAGTTACTTGGGCTTCAACAGCCAAGCTGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp AGGCAGCATTACAGTAGCCTAAGGACTTGCTGGCACTGGGCCAGTCTTGTGCTTTCTCCATGCAAGCATTaGTCCTCTGGCAAATTCACA +
Preference number: 4 (lower is better)
Translates to: RQHYSSLRTCWHWASLVLSPCKH*SSGKFT
Trigger: TGTGAATTTGCCAGAGGACCAATGCTTGCATGGAGA...AAGCACAAGACTGGCCCAGTGCCAGCAAGTCCTTAGGCTACTGTAATGCTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp GCCCACAAATGTCCTCGTCCCATTCTCCATGCAAGCATTGGTCCTCTGGCAAATAAGAAGATGGCCATGTaGGACAGGAACTGCTTTACC +
Preference number: 4 (lower is better)
Translates to: AHKCPRPILHASIGPLANKKMAM*DRNCFT
Trigger: GGTAAAGCAGTTCCTGTCCCACATGGCCATCTTCTT...ATTTGCCAGAGGACCAATGCTTGCATGGAGAATGGGACGAGGACATTTGTGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR CAA 72 bp TGCCATGCCATTCTCCTTCAAACCTCTGTCATCTGCTaGCCCACAAATGTCCTCGTCCCATTCTCCATGCAA +
Preference number: 4 (lower is better)
Translates to: CHAILLQTSVIC*PTNVLVPFSMQ
Trigger: TTGCATGGAGAATGGGACGAGGACATTTGTGGGCAAGCAGATGACAGAGGTTTGAAGGAGAATGGCATGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR TCA 90 bp AAGCTAAAGAATATCCCAGACTCACATGACCACAGGTCCCAGGTTAGGCACCTGAGATCATTCTTGACTTaGATTGCTGACCCTTGGCCC +
Preference number: 4 (lower is better)
Translates to: KLKNIPDSHDHRSQVRHLRSFLT*IADPWP
Trigger: GGGCCAAGGGTCAGCAATTCAAGTCAAGAATGATCT...CAGGTGCCTAACCTGGGACCTGTGGTCATGTGAGTCTGGGATATTCTTTAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR TCA 90 bp CTGCTCCAACATTGTGCCAGGAAGATTCTTCTGAACACAAGAGCTCTAAGGCTGTTTAGAAGGCTGTGGTaGGGGCTAAGAGTCACAGGT +
Preference number: 4 (lower is better)
Translates to: LLQHCARKILLNTRALRLFRRLW*GLRVTG
Trigger: ACCTGTGACTCTTAGCCCTCACCACAGCCTTCTAAA...CAGCCTTAGAGCTCTTGTGTTCAGAAGAATCTTCCTGGCACAATGTTGGAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR TCA 90 bp TGGGTTTCTCCCCGGAACTCTCAAGGATTTCAGTTCCCAATTACCACTTTTATTCATGAGCACCTGCGGTaGCAATGCTCTGCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: WVSPRNSQGFQFPITTFIHEHLR*QCSAVA
Trigger: AGCCACAGCAGAGCATTGTCACCGCAGGTGCTCATG...AATAAAAGTGGTAATTGGGAACTGAAATCCTTGAGAGTTCCGGGGAGAAACCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR TCA 90 bp GCTCTGCTGTGGCTTTTTGAAGCCAGAGTGAAGAAAGACTGGGTTAGTACAGCAAAGGGAAGGCACAGCTaGGAAATAAGTACCCGCTGT +
Preference number: 4 (lower is better)
Translates to: ALLWLFEARVKKDWVSTAKGRHS*EISTRC
Trigger: ACAGCGGGTACTTATTTCTCAGCTGTGCCTTCCCTT...TGCTGTACTAACCCAGTCTTTCTTCACTCTGGCTTCAAAAAGCCACAGCAGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR TCA 90 bp CTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTGGATCTAGCACCCAGAAACCAGATTATTTTCCAAACATaGAGGAGTGGTTCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: LYKAGLPRFGLDLAPRNQIIFQT*RSGSCW
Trigger: CCAACAAGAACCACTCCTTCATGTTTGGAAAATAAT...CTGGTTTCTGGGTGCTAGATCCAGCCCAAACCTGGGAAGGCCAGCCTTGTACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR TCA 90 bp GGGTCCTACCATATGATCTGTTGGGAAGCTTGGGGTTTAGGGGAAGGTGAATTTCTGGTCAAAACACTCTaGGAGTGCTACCTCTCTGAG +
Preference number: 4 (lower is better)
Translates to: GSYHMICWEAWGLGEGEFLVKTL*ECYLSE
Trigger: CTCAGAGAGGTAGCACTCTCAGAGTGTTTTGACCAG...AAATTCACCTTCCCCTAAACCCCAAGCTTCCCAACAGATCATATGGTAGGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR TCA 90 bp GGGTCCTACCATATGATCTGTTGGGAAGCTTGGGGTTTAGGGGAAGGTGAATTTTTGGAGGGTTCAGAATaGATCAAGGGTCCAGTGGAG +
Preference number: 4 (lower is better)
Translates to: GSYHMICWEAWGLGEGEFLEGSE*IKGPVE
Trigger: CTCCACTGGACCCTTGATTCATTCTGAACCCTCCAA...AAATTCACCTTCCCCTAAACCCCAAGCTTCCCAACAGATCATATGGTAGGACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp CCAGCTGTCTTTTGTGCCAGCTTGGCTGTTGAAGCCCAAGTAACTGGCAGAGACTTTAACTGGGCCATCTaGTCCTTCATTGCTTTTGCT +
Preference number: 4 (lower is better)
Translates to: PAVFCASLAVEAQVTGRDFNWAI*SFIAFA
Trigger: AGCAAAAGCAATGAAGGAGCAGATGGCCCAGTTAAA...GTCTCTGCCAGTTACTTGGGCTTCAACAGCCAAGCTGGCACAAAAGACAGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp CTGCTCCAACATTGTGCCAGGAAGATTCTTCTGAACACAAGAGCTCTAAGGCTGACTGGGGCATTTCTCTaGGGCTGCAACACCAATACA +
Preference number: 4 (lower is better)
Translates to: LLQHCARKILLNTRALRLTGAFL*GCNTNT
Trigger: TGTATTGGTGTTGCAGCCGCAGAGAAATGCCCCAGT...CAGCCTTAGAGCTCTTGTGTTCAGAAGAATCTTCCTGGCACAATGTTGGAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp GGGTCCTACCATATGATCTGTTGGGAAGCTTGGGGTTTAGGGGAAGGTGAATTTACTGGGGCATTTCTCTaGGGCTGCAACACCAATACA +
Preference number: 4 (lower is better)
Translates to: GSYHMICWEAWGLGEGEFTGAFL*GCNTNT
Trigger: TGTATTGGTGTTGCAGCCGCAGAGAAATGCCCCAGT...AAATTCACCTTCCCCTAAACCCCAAGCTTCCCAACAGATCATATGGTAGGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp GCTCTGCTGTGGCTTTTTGAAGCCAGAGTGAAGAAAGACTGGGTTAGTACAGCATTGCTTTCTCTGGCCTaGTGCCCTGGATCCTCATTT +
Preference number: 4 (lower is better)
Translates to: ALLWLFEARVKKDWVSTALLSLA*CPGSSF
Trigger: AAATGAGGATCCAGGGCAGCAGGCCAGAGAAAGCAA...TGCTGTACTAACCCAGTCTTTCTTCACTCTGGCTTCAAAAAGCCACAGCAGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp AATCAGCTTTCTTCTTTGTGCTCACAGGGCCTAGAGGAGCCTCCAGGCAGGGATTTCTCTTATGGTCTCTaGCAAAAGCACCTGCCTTTT +
Preference number: 4 (lower is better)
Translates to: NQLSSLCSQGLEEPPGRDFSYGL*QKHLPF
Trigger: AAAAGGCAGGTGCTTTTGGCAGAGACCATAAGAGAA...ATCCCTGCCTGGAGGCTCCTCTAGGCCCTGTGAGCACAAAGAAGAAAGCTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp CAGACTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTGGATCTAGCACCCAGAAAAACGTCCACTTGGGTTaGAGCAAACTTGAACAAAAT +
Preference number: 4 (lower is better)
Translates to: QTVQGWPSQVWAGSSTQKNVHLG*SKLEQN
Trigger: ATTTTGTTCAAGTTTGCTGCAACCCAAGTGGACGTT...TTTCTGGGTGCTAGATCCAGCCCAAACCTGGGAAGGCCAGCCTTGTACAGTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp GGGTCCTACCATATGATCTGTTGGGAAGCTTGGGGTTTAGGGGAAGGTGAATTTGCCAAGCAGTGTGGTTaGTTAGAAAGGGAAGGCACA +
Preference number: 4 (lower is better)
Translates to: GSYHMICWEAWGLGEGEFAKQCG*LEREGT
Trigger: TGTGCCTTCCCTTTCTAAGCAACCACACTGCTTGGC...AAATTCACCTTCCCCTAAACCCCAAGCTTCCCAACAGATCATATGGTAGGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp CTGCTCCAACATTGTGCCAGGAAGATTCTTCTGAACACAAGAGCTCTAAGGCTGCACCTCACCTTGGGTTaGAAGGCTGTCATTAGCAAC +
Preference number: 4 (lower is better)
Translates to: LLQHCARKILLNTRALRLHLTLG*KAVISN
Trigger: GTTGCTAATGACAGCCTTGCAACCCAAGGTGAGGTG...CAGCCTTAGAGCTCTTGTGTTCAGAAGAATCTTCCTGGCACAATGTTGGAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp AACAGGGACCTCGGGGTTGAAGAGTCATGCCATAAGTCAGTCAACATGGAACCACAAACCTCTGTCATCTaGTTGCCCACAAATGTCCTC +
Preference number: 4 (lower is better)
Translates to: NRDLGVEESCHKSVNMEPQTSVI*LPTNVL
Trigger: GAGGACATTTGTGGGCAAGCAGATGACAGAGGTTTG...TGGTTCCATGTTGACTGACTTATGGCATGACTCTTCAACCCCGAGGTCCCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp GGGTCCTACCATATGATCTGTTGGGAAGCTTGGGGTTTAGGGGAAGGTGAATTTACTGGCAGAGACTCCTaGCATGCCATTCTCCTTCAA +
Preference number: 4 (lower is better)
Translates to: GSYHMICWEAWGLGEGEFTGRDS*HAILLQ
Trigger: TTGAAGGAGAATGGCATGGCAGGAGTCTCTGCCAGT...AAATTCACCTTCCCCTAAACCCCAAGCTTCCCAACAGATCATATGGTAGGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp GCTCTGCTGTGGCTTTTTGAAGCCAGAGTGAAGAAAGACTGGGTTAGTACAGCACAGCTTTCTTCTTTGTaGTCACAGGGCCTAGAGGAG +
Preference number: 4 (lower is better)
Translates to: ALLWLFEARVKKDWVSTAQLSSL*SQGLEE
Trigger: CTCCTCTAGGCCCTGTGAGCACAAAGAAGAAAGCTG...TGCTGTACTAACCCAGTCTTTCTTCACTCTGGCTTCAAAAAGCCACAGCAGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp GGGTCCTACCATATGATCTGTTGGGAAGCTTGGGGTTTAGGGGAAGGTGAATTTTCTGGCCTGCTGCCCTaGATCCTCATTTTAGTGCAA +
Preference number: 4 (lower is better)
Translates to: GSYHMICWEAWGLGEGEFSGLLP*ILILVQ
Trigger: TTGCACTAAAATGAGGATCCAGGGCAGCAGGCCAGA...AAATTCACCTTCCCCTAAACCCCAAGCTTCCCAACAGATCATATGGTAGGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp GGGTCCTACCATATGATCTGTTGGGAAGCTTGGGGTTTAGGGGAAGGTGAATTTCTTTCAGATAAGGCCTaGCCTAACGTCCACTTGGGT +
Preference number: 4 (lower is better)
Translates to: GSYHMICWEAWGLGEGEFLSDKA*PNVHLG
Trigger: ACCCAAGTGGACGTTAGGCCAGGCCTTATCTGAAAG...AAATTCACCTTCCCCTAAACCCCAAGCTTCCCAACAGATCATATGGTAGGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp AGGCAGCATTACAGTAGCCTAAGGACTTGCTGGCACTGGGCCAGTCTTGTGCTTAGAGTGAAGAAAGACTaGGTTAGTACAGCATCAGCT +
Preference number: 4 (lower is better)
Translates to: RQHYSSLRTCWHWASLVLRVKKD*VSTASA
Trigger: AGCTGATGCTGTACTAACCCAGTCTTTCTTCACTCT...AAGCACAAGACTGGCCCAGTGCCAGCAAGTCCTTAGGCTACTGTAATGCTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp GCATCTCTGGGTTTCTCCCCGGAACTCTCAAGGATTTCAGTTCCCAATTACCACCACATGATGGTTGGCTaGTTCCTAGGATGGGTGAAA +
Preference number: 4 (lower is better)
Translates to: ASLGFSPELSRISVPNYHHMMVG*FLGWVK
Trigger: TTTCACCCATCCTAGGAACCAGCCAACCATCATGTG...GTGGTAATTGGGAACTGAAATCCTTGAGAGTTCCGGGGAGAAACCCAGAGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp AAGCTAAAGAATATCCCAGACTCACATGACCACAGGTCCCAGGTTAGGCACCTGTCTACACATGATGGTTaGCTGGTTCCTAGGATGGGT +
Preference number: 4 (lower is better)
Translates to: KLKNIPDSHDHRSQVRHLSTHDG*LVPRMG
Trigger: ACCCATCCTAGGAACCAGCCAACCATCATGTGTAGA...CAGGTGCCTAACCTGGGACCTGTGGTCATGTGAGTCTGGGATATTCTTTAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp TTTCAGGAACAAGAGGAGCAGACTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTGTCTCTAAGGTATGGTaGAAAGAGATAAGGAGTCAC +
Preference number: 4 (lower is better)
Translates to: FQEQEEQTVQGWPSQVWAVSKVW*KEIRSH
Trigger: GTGACTCCTTATCTCTTTCCACCATACCTTAGAGAC...AGCCCAAACCTGGGAAGGCCAGCCTTGTACAGTCTGCTCCTCTTGTTCCTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp GCCCACAAATGTCCTCGTCCCATTCTCCATGCAAGCATTGGTCCTCTGGCAAATCATCCCCTCCATGTCTaGAGAATAGAATGGTATCAG +
Preference number: 4 (lower is better)
Translates to: AHKCPRPILHASIGPLANHPLHV*RIEWYQ
Trigger: CTGATACCATTCTATTCTCCAGACATGGAGGGGATG...ATTTGCCAGAGGACCAATGCTTGCATGGAGAATGGGACGAGGACATTTGTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp CCAGCTGTCTTTTGTGCCAGCTTGGCTGTTGAAGCCCAAGTAACTGGCAGAGACCAAGCATTGGTCCTCTaGCAAATTCACACCAACATA +
Preference number: 4 (lower is better)
Translates to: PAVFCASLAVEAQVTGRDQALVL*QIHTNI
Trigger: TATGTTGGTGTGAATTTGCCAGAGGACCAATGCTTG...GTCTCTGCCAGTTACTTGGGCTTCAACAGCCAAGCTGGCACAAAAGACAGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp GCATCTCTGGGTTTCTCCCCGGAACTCTCAAGGATTTCAGTTCCCAATTACCACCAAGTACTTCCAGCCTaGAGTTTGTGGGTGGAAGAA +
Preference number: 4 (lower is better)
Translates to: ASLGFSPELSRISVPNYHQVLPA*SLWVEE
Trigger: TTCTTCCACCCACAAACTCCAGGCTGGAAGTACTTG...GTGGTAATTGGGAACTGAAATCCTTGAGAGTTCCGGGGAGAAACCCAGAGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
3UTR CAA 72 bp ATCCTCACTAGAACGCCGAGGACAATCAGTCTCAAATaGCAGGTAAGTGTGAACAAGCCCACGTTCTGGTCA +
Preference number: 4 (lower is better)
Translates to: ILTRTPRTISLK*QVSVNKPTFWS
Trigger: TGACCAGAACGTGGGCTTGTTCACACTTACCTGCAATTTGAGACTGATTGTCCTCGGCGTTCTAGTGAGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338901.4
CDS-3UTR TCA 90 bp TCAAGGATTTCAGTTCCCAATTACCACTTTTATTGGTTCTCTCTAGACCTCAAAGCCGTTCACGACCTCTaGCAGGCGGCTACTGTCCTG +
Preference number: 4 (lower is better)
Translates to: SRISVPNYHFYWFSLDLKAVHDL*QAATVL
Trigger: CAGGACAGTAGCCGCCTGTCAGAGGTCGTGAACGGC...TTTGAGGTCTAGAGAGAACCAATAAAAGTGGTAATTGGGAACTGAAATCCTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374552.9
ENST00000374553.6
CDS-3UTR TCA 90 bp GGGTCCTACCATATGATCTGTTGGGAAGCTTGGGGTTTAGGGGAAGGTGAATTTAGATCATTCTTGACTTaGATTGCTGACCCTTGGCCC +
Preference number: 4 (lower is better)
Translates to: GSYHMICWEAWGLGEGEFRSFLT*IADPWP
Trigger: GGGCCAAGGGTCAGCAATTCAAGTCAAGAATGATCT...AAATTCACCTTCCCCTAAACCCCAAGCTTCCCAACAGATCATATGGTAGGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR TCA 90 bp AACAGGGACCTCGGGGTTGAAGAGTCATGCCATAAGTCAGTCAACATGGAACCATTGTCACTTTGCCAATaGCTTAGCAGCAATAGGGCT +
Preference number: 4 (lower is better)
Translates to: NRDLGVEESCHKSVNMEPLSLCQ*LSSNRA
Trigger: AGCCCTATTGCTGCTAAGTCATTGGCAAAGTGACAA...TGGTTCCATGTTGACTGACTTATGGCATGACTCTTCAACCCCGAGGTCCCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp GAACTCTCAAGGATTTCAGTTCCCAATTACCACTTTTATTGGTTCTCTCTAGACCCCGGTTCCAATGGCTaGTGCTTAGGTGACGGCTGC +
Preference number: 4 (lower is better)
Translates to: ELSRISVPNYHFYWFSLDPGSNG*CLGDGC
Trigger: GCAGCCGTCACCTAAGCAGCAGCCATTGGAACCGGG...GTCTAGAGAGAACCAATAAAAGTGGTAATTGGGAACTGAAATCCTTGAGAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374552.9
ENST00000374553.6
CDS-3UTR GCA 90 bp CCAGCTGTCTTTTGTGCCAGCTTGGCTGTTGAAGCCCAAGTAACTGGCAGAGACTTTTGCTTCTTTTATTaGGGCGAACACGCCTACTTT +
Preference number: 4 (lower is better)
Translates to: PAVFCASLAVEAQVTGRDFCFFY*GEHAYF
Trigger: AAAGTAGGCGTGTTCGCCGCAATAAAAGAAGCAAAA...GTCTCTGCCAGTTACTTGGGCTTCAACAGCCAAGCTGGCACAAAAGACAGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp CTGAGAGACCCTGGTAGTATCAAAGTCTCTAAGGTATGGTGGAAAGAGATAAGGTGTTGTAGTTGGTCTTaGCCGTCTCGATGCTGCGTG +
Preference number: 4 (lower is better)
Translates to: LRDPGSIKVSKVWWKEIRCCSWS*PSRCCV
Trigger: CACGCAGCATCGAGACGGGCAAGACCAACTACAACA...CCTTATCTCTTTCCACCATACCTTAGAGACTTTGATACTACCAGGGTCTCTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp CTGAGAGACCCTGGTAGTATCAAAGTCTCTAAGGTATGGTGGAAAGAGATAAGGATGGAGATGTCAGCGTaGACCATCTTGACGGCGATC +
Preference number: 4 (lower is better)
Translates to: LRDPGSIKVSKVWWKEIRMEMSA*TILTAI
Trigger: GATCGCCGTCAAGATGGTGCACGCTGACATCTCCAT...CCTTATCTCTTTCCACCATACCTTAGAGACTTTGATACTACCAGGGTCTCTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp AGGCAGCATTACAGTAGCCTAAGGACTTGCTGGCACTGGGCCAGTCTTGTGCTTAACGTCCACTTGGGTTaGAGCAAACTTGAACAAAAT +
Preference number: 4 (lower is better)
Translates to: RQHYSSLRTCWHWASLVLNVHLG*SKLEQN
Trigger: ATTTTGTTCAAGTTTGCTGCAACCCAAGTGGACGTT...AAGCACAAGACTGGCCCAGTGCCAGCAAGTCCTTAGGCTACTGTAATGCTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp TTTCAGGAACAAGAGGAGCAGACTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTAGAATGGTATCAGGATaGTCTTTAGGGGCACAATTA +
Preference number: 4 (lower is better)
Translates to: FQEQEEQTVQGWPSQVWARMVSG*SLGAQL
Trigger: TAATTGTGCCCCTAAAGAGCATCCTGATACCATTCT...AGCCCAAACCTGGGAAGGCCAGCCTTGTACAGTCTGCTCCTCTTGTTCCTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp AGGCAGCATTACAGTAGCCTAAGGACTTGCTGGCACTGGGCCAGTCTTGTGCTTAGAATGGTATCAGGATaGTCTTTAGGGGCACAATTA +
Preference number: 4 (lower is better)
Translates to: RQHYSSLRTCWHWASLVLRMVSG*SLGAQL
Trigger: TAATTGTGCCCCTAAAGAGCATCCTGATACCATTCT...AAGCACAAGACTGGCCCAGTGCCAGCAAGTCCTTAGGCTACTGTAATGCTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp CTGAGAGACCCTGGTAGTATCAAAGTCTCTAAGGTATGGTGGAAAGAGATAAGGTCGTCCCATTCTCCATaGAAGCATTGGTCCTCTGGC +
Preference number: 4 (lower is better)
Translates to: LRDPGSIKVSKVWWKEIRSSHSP*KHWSSG
Trigger: GCCAGAGGACCAATGCTTGCATGGAGAATGGGACGA...CCTTATCTCTTTCCACCATACCTTAGAGACTTTGATACTACCAGGGTCTCTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp CTGCTCCAACATTGTGCCAGGAAGATTCTTCTGAACACAAGAGCTCTAAGGCTGCAAACCTCTGTCATCTaGTTGCCCACAAATGTCCTC +
Preference number: 4 (lower is better)
Translates to: LLQHCARKILLNTRALRLQTSVI*LPTNVL
Trigger: GAGGACATTTGTGGGCAAGCAGATGACAGAGGTTTG...CAGCCTTAGAGCTCTTGTGTTCAGAAGAATCTTCCTGGCACAATGTTGGAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp CTGAGAGACCCTGGTAGTATCAAAGTCTCTAAGGTATGGTGGAAAGAGATAAGGATGTGGGACAGGAACTaGTTTACCCCCTCACTCTGC +
Preference number: 4 (lower is better)
Translates to: LRDPGSIKVSKVWWKEIRMWDRN*FTPSLC
Trigger: GCAGAGTGAGGGGGTAAAGCAGTTCCTGTCCCACAT...CCTTATCTCTTTCCACCATACCTTAGAGACTTTGATACTACCAGGGTCTCTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp CTGAGAGACCCTGGTAGTATCAAAGTCTCTAAGGTATGGTGGAAAGAGATAAGGAGTTCTGATGAAGGCTaGAGCTACTCTCTCCCTGCC +
Preference number: 4 (lower is better)
Translates to: LRDPGSIKVSKVWWKEIRSSDEG*SYSLPA
Trigger: GGCAGGGAGAGAGTAGCTGCAGCCTTCATCAGAACT...CCTTATCTCTTTCCACCATACCTTAGAGACTTTGATACTACCAGGGTCTCTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp GCCAGCTTGGCTGTTGAAGCCCAAGTAACTGGCAGAGACTCCTGCCATGCCATTTTCTTCTTCAGAGTATaGCTTTTCATCAGGGAAGAA +
Preference number: 4 (lower is better)
Translates to: ASLAVEAQVTGRDSCHAIFFFRV*LFIREE
Trigger: TTCTTCCCTGATGAAAAGCCATACTCTGAAGAAGAA...AATGGCATGGCAGGAGTCTCTGCCAGTTACTTGGGCTTCAACAGCCAAGCTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp GAACTCTCAAGGATTTCAGTTCCCAATTACCACTTTTATTGGTTCTCTCTAGACAATCCCTGGAATTCCTaGGGGTCCCTGGGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: ELSRISVPNYHFYWFSLDNPWNS*GSLGSW
Trigger: CCAGGACCCCAGGGACCCCCAGGAATTCCAGGGATT...GTCTAGAGAGAACCAATAAAAGTGGTAATTGGGAACTGAAATCCTTGAGAGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp GGGACTTCTGGAGGTCATCCCGTCCAACCCTTCGTCCCCAGACAGAATTTGATTATAAGTCAGTCAACATaGAACCAAAGAAGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: GTSGGHPVQPFVPRQNLIISQST*NQRRFC
Trigger: GCAGAACCTTCTTTGGTTCCATGTTGACTGACTTAT...AATCAAATTCTGTCTGGGGACGAAGGGTTGGACGGGATGACCTCCAGAAGTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp CTGCTCCAACATTGTGCCAGGAAGATTCTTCTGAACACAAGAGCTCTAAGGCTGAGGAGTGGTTCTTGTTaGTTTCTGCTACAACTGCGG +
Preference number: 4 (lower is better)
Translates to: LLQHCARKILLNTRALRLRSGSC*FLLQLR
Trigger: CCGCAGTTGTAGCAGAAACCAACAAGAACCACTCCT...CAGCCTTAGAGCTCTTGTGTTCAGAAGAATCTTCCTGGCACAATGTTGGAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp AACAGGGACCTCGGGGTTGAAGAGTCATGCCATAAGTCAGTCAACATGGAACCAGTCTGCGGCTTAAACTaGTCAAAACACTCTGAGAGT +
Preference number: 4 (lower is better)
Translates to: NRDLGVEESCHKSVNMEPVCGLN*SKHSES
Trigger: ACTCTCAGAGTGTTTTGACCAGTTTAAGCCGCAGAC...TGGTTCCATGTTGACTGACTTATGGCATGACTCTTCAACCCCGAGGTCCCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp CTGCTCCAACATTGTGCCAGGAAGATTCTTCTGAACACAAGAGCTCTAAGGCTGGGCTGGTTCCTAGGATaGGTGAAAGAACATAAAGGC +
Preference number: 4 (lower is better)
Translates to: LLQHCARKILLNTRALRLGWFLG*VKEHKG
Trigger: GCCTTTATGTTCTTTCACCCATCCTAGGAACCAGCC...CAGCCTTAGAGCTCTTGTGTTCAGAAGAATCTTCCTGGCACAATGTTGGAGCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp GCTCTGCTGTGGCTTTTTGAAGCCAGAGTGAAGAAAGACTGGGTTAGTACAGCACACATGATGGTTGGCTaGTTCCTAGGATGGGTGAAA +
Preference number: 4 (lower is better)
Translates to: ALLWLFEARVKKDWVSTAHMMVG*FLGWVK
Trigger: TTTCACCCATCCTAGGAACCAGCCAACCATCATGTG...TGCTGTACTAACCCAGTCTTTCTTCACTCTGGCTTCAAAAAGCCACAGCAGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp AAGCTAAAGAATATCCCAGACTCACATGACCACAGGTCCCAGGTTAGGCACCTGCATCCCCTCCATGTCTaGAGAATAGAATGGTATCAG +
Preference number: 4 (lower is better)
Translates to: KLKNIPDSHDHRSQVRHLHPLHV*RIEWYQ
Trigger: CTGATACCATTCTATTCTCCAGACATGGAGGGGATG...CAGGTGCCTAACCTGGGACCTGTGGTCATGTGAGTCTGGGATATTCTTTAGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp GGGACTTCTGGAGGTCATCCCGTCCAACCCTTCGTCCCCAGACAGAATTTGATTGAATCAAGGGTCCAGTaGAGATCCTATTTCCTTTAT +
Preference number: 4 (lower is better)
Translates to: GTSGGHPVQPFVPRQNLIESRVQ*RSYFLY
Trigger: ATAAAGGAAATAGGATCTCCACTGGACCCTTGATTC...AATCAAATTCTGTCTGGGGACGAAGGGTTGGACGGGATGACCTCCAGAAGTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp AACATAAAGGCCACAAGTTCTGTGGGTCCCAGAGGCCTGCTGCTCCAACATTGTCCTCTAGAGTTCCTTTaGAGGGTTCAGAATGAATCA +
Preference number: 4 (lower is better)
Translates to: NIKATSSVGPRGLLLQHCPLEFL*RVQNES
Trigger: TGATTCATTCTGAACCCTCCAAAGGAACTCTAGAGG...ACAATGTTGGAGCAGCAGGCCTCTGGGACCCACAGAACTTGTGGCCTTTATGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp GCCCACAAATGTCCTCGTCCCATTCTCCATGCAAGCATTGGTCCTCTGGCAAATCAAGCATTGGTCCTCTaGCAAATTCACACCAACATA +
Preference number: 4 (lower is better)
Translates to: AHKCPRPILHASIGPLANQALVL*QIHTNI
Trigger: TATGTTGGTGTGAATTTGCCAGAGGACCAATGCTTG...ATTTGCCAGAGGACCAATGCTTGCATGGAGAATGGGACGAGGACATTTGTGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp TGGGTTTCTCCCCGGAACTCTCAAGGATTTCAGTTCCCAATTACCACTTTTATTTGCTTGCTCACCACTTaGGGCAGGTCATCTTCCCTC +
Preference number: 4 (lower is better)
Translates to: WVSPRNSQGFQFPITTFICLLTT*GRSSSL
Trigger: GAGGGAAGATGACCTGCCCCAAGTGGTGAGCAAGCA...AATAAAAGTGGTAATTGGGAACTGAAATCCTTGAGAGTTCCGGGGAGAAACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp GGGTCCTACCATATGATCTGTTGGGAAGCTTGGGGTTTAGGGGAAGGTGAATTTAAGAAGATGGCCATGTaGGACAGGAACTGCTTTACC +
Preference number: 4 (lower is better)
Translates to: GSYHMICWEAWGLGEGEFKKMAM*DRNCFT
Trigger: GGTAAAGCAGTTCCTGTCCCACATGGCCATCTTCTT...AAATTCACCTTCCCCTAAACCCCAAGCTTCCCAACAGATCATATGGTAGGACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp TGGGTTTCTCCCCGGAACTCTCAAGGATTTCAGTTCCCAATTACCACTTTTATTAGCCTAAGGACTTGCTaGCACTGGGCCAGTCTTGTG +
Preference number: 4 (lower is better)
Translates to: WVSPRNSQGFQFPITTFISLRTC*HWASLV
Trigger: CACAAGACTGGCCCAGTGCCAGCAAGTCCTTAGGCT...AATAAAAGTGGTAATTGGGAACTGAAATCCTTGAGAGTTCCGGGGAGAAACCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp ATGACGCCAGGTGAAACAGCTCCCACTGAGGGACTGAGACGACTCGTGTGCTTTCCATTAGAATATCAGTaGATTTCTCAGCAGAAACCT +
Preference number: 4 (lower is better)
Translates to: MTPGETAPTEGLRRLVCFPLEYQ*ISQQKP
Trigger: AGGTTTCTGCTGAGAAATCCACTGATATTCTAATGG...AAAGCACACGAGTCGTCTCAGTCCCTCAGTGGGAGCTGTTTCACCTGGCGTCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527388.5
CDS-3UTR TCA 90 bp GCCCACAAATGTCCTCGTCCCATTCTCCATGCAAGCATTGGTCCTCTGGCAAATCTGAAAGATCATTCTTaGCTTGAATTGCTGACCCTT +
Preference number: 4 (lower is better)
Translates to: AHKCPRPILHASIGPLANLKDHS*LELLTL
Trigger: AAGGGTCAGCAATTCAAGTCAAGAATGATCTTTCAG...ATTTGCCAGAGGACCAATGCTTGCATGGAGAATGGGACGAGGACATTTGTGGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR TCA 90 bp AACAGGGACCTCGGGGTTGAAGAGTCATGCCATAAGTCAGTCAACATGGAACCAATTGAGCACTCCACCTaGAAGATCATTCTTGACTTG +
Preference number: 4 (lower is better)
Translates to: NRDLGVEESCHKSVNMEPIEHST*KIILDL
Trigger: CAAGTCAAGAATGATCTTTCAGGTGGAGTGCTCAAT...TGGTTCCATGTTGACTGACTTATGGCATGACTCTTCAACCCCGAGGTCCCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR TCA 90 bp CTGCTCCAACATTGTGCCAGGAAGATTCTTCTGAACACAAGAGCTCTAAGGCTGTCTGCTGTGGCTTTTTaGAGCCAGAGTGAAGAAAGA +
Preference number: 4 (lower is better)
Translates to: LLQHCARKILLNTRALRLSAVAF*SQSEER
Trigger: TCTTTCTTCACTCTGGCTTCAAAAAGCCACAGCAGA...CAGCCTTAGAGCTCTTGTGTTCAGAAGAATCTTCCTGGCACAATGTTGGAGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR TCA 90 bp AACATAAAGGCCACAAGTTCTGTGGGTCCCAGAGGCCTGCTGCTCCAACATTGTTCCTGGAGAGAGTCCTaGAATGGATTAAAAGACAAA +
Preference number: 4 (lower is better)
Translates to: NIKATSSVGPRGLLLQHCSWRES*NGLKDK
Trigger: TTTGTCTTTTAATCCATTTCAGGACTCTCTCCAGGA...ACAATGTTGGAGCAGCAGGCCTCTGGGACCCACAGAACTTGTGGCCTTTATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp AACATAAAGGCCACAAGTTCTGTGGGTCCCAGAGGCCTGCTGCTCCAACATTGTTTTTGCTTCTTTTATTaGGGCGAACACGCCTACTTT +
Preference number: 4 (lower is better)
Translates to: NIKATSSVGPRGLLLQHCFCFFY*GEHAYF
Trigger: AAAGTAGGCGTGTTCGCCGCAATAAAAGAAGCAAAA...ACAATGTTGGAGCAGCAGGCCTCTGGGACCCACAGAACTTGTGGCCTTTATGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp GGGTCCTACCATATGATCTGTTGGGAAGCTTGGGGTTTAGGGGAAGGTGAATTTGGGGTTGAAGAGTCATaGCATAAGTCAGTCAACATG +
Preference number: 4 (lower is better)
Translates to: GSYHMICWEAWGLGEGEFGVEES*HKSVNM
Trigger: CATGTTGACTGACTTATGGCATGACTCTTCAACCCC...AAATTCACCTTCCCCTAAACCCCAAGCTTCCCAACAGATCATATGGTAGGACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp CCAGCTGTCTTTTGTGCCAGCTTGGCTGTTGAAGCCCAAGTAACTGGCAGAGACGGAAAATTCTGTTTGTaGCCAGGTAAGCTAAAGAAT +
Preference number: 4 (lower is better)
Translates to: PAVFCASLAVEAQVTGRDGKFCL*PGKLKN
Trigger: ATTCTTTAGCTTACCTGGGCACAAACAGAATTTTCC...GTCTCTGCCAGTTACTTGGGCTTCAACAGCCAAGCTGGCACAAAAGACAGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp CTGAGAGACCCTGGTAGTATCAAAGTCTCTAAGGTATGGTGGAAAGAGATAAGGACTGGCAGAGACTCCTaGCATGCCATTCTCCTTCAA +
Preference number: 4 (lower is better)
Translates to: LRDPGSIKVSKVWWKEIRTGRDS*HAILLQ
Trigger: TTGAAGGAGAATGGCATGGCAGGAGTCTCTGCCAGT...CCTTATCTCTTTCCACCATACCTTAGAGACTTTGATACTACCAGGGTCTCTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp GAACTCTCAAGGATTTCAGTTCCCAATTACCACTTTTATTGGTTCTCTCTAGACCTGGAGGTTGGTGCTTaGTCACCACTTGGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: ELSRISVPNYHFYWFSLDLEVGA*SPLGAG
Trigger: ACCTGCCCCAAGTGGTGAGCAAGCACCAACCTCCAG...GTCTAGAGAGAACCAATAAAAGTGGTAATTGGGAACTGAAATCCTTGAGAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp TGGGTTTCTCCCCGGAACTCTCAAGGATTTCAGTTCCCAATTACCACTTTTATTACTGGGCCAGTCTTGTaGTTTCCAGTCCAGAGGCTA +
Preference number: 4 (lower is better)
Translates to: WVSPRNSQGFQFPITTFITGPVL*FPVQRL
Trigger: TAGCCTCTGGACTGGAAAGCACAAGACTGGCCCAGT...AATAAAAGTGGTAATTGGGAACTGAAATCCTTGAGAGTTCCGGGGAGAAACCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp CTGAGAGACCCTGGTAGTATCAAAGTCTCTAAGGTATGGTGGAAAGAGATAAGGCAGGCCTTGTCACCCTaGAGTCACTGGGGAATAAAT +
Preference number: 4 (lower is better)
Translates to: LRDPGSIKVSKVWWKEIRQALSP*SHWGIN
Trigger: ATTTATTCCCCAGTGACTCCAGGGTGACAAGGCCTG...CCTTATCTCTTTCCACCATACCTTAGAGACTTTGATACTACCAGGGTCTCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp GCTCTGCTGTGGCTTTTTGAAGCCAGAGTGAAGAAAGACTGGGTTAGTACAGCAAACTCAAGGTCATTCTaGAAAGTCAAGCAGGCCTTG +
Preference number: 4 (lower is better)
Translates to: ALLWLFEARVKKDWVSTANSRSF*KVKQAL
Trigger: CAAGGCCTGCTTGACTTTCCAGAATGACCTTGAGTT...TGCTGTACTAACCCAGTCTTTCTTCACTCTGGCTTCAAAAAGCCACAGCAGAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp CTGAGAGACCCTGGTAGTATCAAAGTCTCTAAGGTATGGTGGAAAGAGATAAGGGCCAAGGATGCTCCTTaGCAGGTTTCTCTTATGGTC +
Preference number: 4 (lower is better)
Translates to: LRDPGSIKVSKVWWKEIRAKDAP*QVSLMV
Trigger: GACCATAAGAGAAACCTGCCAAGGAGCATCCTTGGC...CCTTATCTCTTTCCACCATACCTTAGAGACTTTGATACTACCAGGGTCTCTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp CTGAGAGACCCTGGTAGTATCAAAGTCTCTAAGGTATGGTGGAAAGAGATAAGGGGCCTAACGTCCACTTaGGTTGCAGCAAACTTGAAC +
Preference number: 4 (lower is better)
Translates to: LRDPGSIKVSKVWWKEIRGLTST*VAANLN
Trigger: GTTCAAGTTTGCTGCAACCCAAGTGGACGTTAGGCC...CCTTATCTCTTTCCACCATACCTTAGAGACTTTGATACTACCAGGGTCTCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp AACAGGGACCTCGGGGTTGAAGAGTCATGCCATAAGTCAGTCAACATGGAACCACCAAACATGAAGGAGTaGTTCTTGTTGGTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: NRDLGVEESCHKSVNMEPPNMKE*FLLVSA
Trigger: AGCAGAAACCAACAAGAACCACTCCTTCATGTTTGG...TGGTTCCATGTTGACTGACTTATGGCATGACTCTTCAACCCCGAGGTCCCTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp AAGCTAAAGAATATCCCAGACTCACATGACCACAGGTCCCAGGTTAGGCACCTGGTCTCTAAGGTATGGTaGAAAGAGATAAGGAGTCAC +
Preference number: 4 (lower is better)
Translates to: KLKNIPDSHDHRSQVRHLVSKVW*KEIRSH
Trigger: GTGACTCCTTATCTCTTTCCACCATACCTTAGAGAC...CAGGTGCCTAACCTGGGACCTGTGGTCATGTGAGTCTGGGATATTCTTTAGCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp AACATAAAGGCCACAAGTTCTGTGGGTCCCAGAGGCCTGCTGCTCCAACATTGTGAATCAAGGGTCCAGTaGAGATCCTATTTCCTTTAT +
Preference number: 4 (lower is better)
Translates to: NIKATSSVGPRGLLLQHCESRVQ*RSYFLY
Trigger: ATAAAGGAAATAGGATCTCCACTGGACCCTTGATTC...ACAATGTTGGAGCAGCAGGCCTCTGGGACCCACAGAACTTGTGGCCTTTATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR TCA 90 bp GCTCTGCTGTGGCTTTTTGAAGCCAGAGTGAAGAAAGACTGGGTTAGTACAGCAATTGAGCACTCCACCTaGAAGATCATTCTTGACTTG +
Preference number: 4 (lower is better)
Translates to: ALLWLFEARVKKDWVSTAIEHST*KIILDL
Trigger: CAAGTCAAGAATGATCTTTCAGGTGGAGTGCTCAAT...TGCTGTACTAACCCAGTCTTTCTTCACTCTGGCTTCAAAAAGCCACAGCAGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR TCA 90 bp TGGGTTTCTCCCCGGAACTCTCAAGGATTTCAGTTCCCAATTACCACTTTTATTTGTGGCCATTCCCTGTaGTTGTTCCAAAGCACAGCA +
Preference number: 4 (lower is better)
Translates to: WVSPRNSQGFQFPITTFICGHSL*LFQSTA
Trigger: TGCTGTGCTTTGGAACAATCACAGGGAATGGCCACA...AATAAAAGTGGTAATTGGGAACTGAAATCCTTGAGAGTTCCGGGGAGAAACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR TCA 90 bp AACAGGGACCTCGGGGTTGAAGAGTCATGCCATAAGTCAGTCAACATGGAACCATCCTGGAGAGAGTCCTaGAATGGATTAAAAGACAAA +
Preference number: 4 (lower is better)
Translates to: NRDLGVEESCHKSVNMEPSWRES*NGLKDK
Trigger: TTTGTCTTTTAATCCATTTCAGGACTCTCTCCAGGA...TGGTTCCATGTTGACTGACTTATGGCATGACTCTTCAACCCCGAGGTCCCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp AAGCTAAAGAATATCCCAGACTCACATGACCACAGGTCCCAGGTTAGGCACCTGTTTTGCTTCTTTTATTaGGGCGAACACGCCTACTTT +
Preference number: 4 (lower is better)
Translates to: KLKNIPDSHDHRSQVRHLFCFFY*GEHAYF
Trigger: AAAGTAGGCGTGTTCGCCGCAATAAAAGAAGCAAAA...CAGGTGCCTAACCTGGGACCTGTGGTCATGTGAGTCTGGGATATTCTTTAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp TTTCAGGAACAAGAGGAGCAGACTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTTTCTCTGAATCTATTTaGATCCACAGGAAGTTACAT +
Preference number: 4 (lower is better)
Translates to: FQEQEEQTVQGWPSQVWAFSESI*IHRKLH
Trigger: ATGTAACTTCCTGTGGATGCAAATAGATTCAGAGAA...AGCCCAAACCTGGGAAGGCCAGCCTTGTACAGTCTGCTCCTCTTGTTCCTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp GCATCTCTGGGTTTCTCCCCGGAACTCTCAAGGATTTCAGTTCCCAATTACCACATAAGTCAGTCAACATaGAACCAAAGAAGGTTCTGC +
Preference number: 4 (lower is better)
Translates to: ASLGFSPELSRISVPNYHISQST*NQRRFC
Trigger: GCAGAACCTTCTTTGGTTCCATGTTGACTGACTTAT...GTGGTAATTGGGAACTGAAATCCTTGAGAGTTCCGGGGAGAAACCCAGAGATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp CTGAGAGACCCTGGTAGTATCAAAGTCTCTAAGGTATGGTGGAAAGAGATAAGGGAGTTCACCTCACCTTaGGTTGCAAGGCTGTCATTA +
Preference number: 4 (lower is better)
Translates to: LRDPGSIKVSKVWWKEIREFTSP*VARLSL
Trigger: TAATGACAGCCTTGCAACCCAAGGTGAGGTGAACTC...CCTTATCTCTTTCCACCATACCTTAGAGACTTTGATACTACCAGGGTCTCTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp GGGTCCTACCATATGATCTGTTGGGAAGCTTGGGGTTTAGGGGAAGGTGAATTTCCAAACATGAAGGAGTaGTTCTTGTTGGTTTCTGCT +
Preference number: 4 (lower is better)
Translates to: GSYHMICWEAWGLGEGEFPNMKE*FLLVSA
Trigger: AGCAGAAACCAACAAGAACCACTCCTTCATGTTTGG...AAATTCACCTTCCCCTAAACCCCAAGCTTCCCAACAGATCATATGGTAGGACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp GCCCACAAATGTCCTCGTCCCATTCTCCATGCAAGCATTGGTCCTCTGGCAAATAAAGTCTCTAAGGTATaGTGGAAAGAGATAAGGAGT +
Preference number: 4 (lower is better)
Translates to: AHKCPRPILHASIGPLANKVSKV*WKEIRS
Trigger: ACTCCTTATCTCTTTCCACCATACCTTAGAGACTTT...ATTTGCCAGAGGACCAATGCTTGCATGGAGAATGGGACGAGGACATTTGTGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR TCA 90 bp GGGTCCTACCATATGATCTGTTGGGAAGCTTGGGGTTTAGGGGAAGGTGAATTTCTGAAAGATCATTCTTaGCTTGAATTGCTGACCCTT +
Preference number: 4 (lower is better)
Translates to: GSYHMICWEAWGLGEGEFLKDHS*LELLTL
Trigger: AAGGGTCAGCAATTCAAGTCAAGAATGATCTTTCAG...AAATTCACCTTCCCCTAAACCCCAAGCTTCCCAACAGATCATATGGTAGGACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR TCA 90 bp GGGTCCTACCATATGATCTGTTGGGAAGCTTGGGGTTTAGGGGAAGGTGAATTTTTATTCCCCATCTCCTaGAAAGGAAACACATTTCAG +
Preference number: 4 (lower is better)
Translates to: GSYHMICWEAWGLGEGEFLFPIS*KGNTFQ
Trigger: CTGAAATGTGTTTCCTTTTCAGGAGATGGGGAATAA...AAATTCACCTTCCCCTAAACCCCAAGCTTCCCAACAGATCATATGGTAGGACCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR TCA 90 bp CTGCTCCAACATTGTGCCAGGAAGATTCTTCTGAACACAAGAGCTCTAAGGCTGTTATTCCCCATCTCCTaGAAAGGAAACACATTTCAG +
Preference number: 4 (lower is better)
Translates to: LLQHCARKILLNTRALRLLFPIS*KGNTFQ
Trigger: CTGAAATGTGTTTCCTTTTCAGGAGATGGGGAATAA...CAGCCTTAGAGCTCTTGTGTTCAGAAGAATCTTCCTGGCACAATGTTGGAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR TCA 90 bp CTGCTCCAACATTGTGCCAGGAAGATTCTTCTGAACACAAGAGCTCTAAGGCTGTCCTGGAGAGAGTCCTaGAATGGATTAAAAGACAAA +
Preference number: 4 (lower is better)
Translates to: LLQHCARKILLNTRALRLSWRES*NGLKDK
Trigger: TTTGTCTTTTAATCCATTTCAGGACTCTCTCCAGGA...CAGCCTTAGAGCTCTTGTGTTCAGAAGAATCTTCCTGGCACAATGTTGGAGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR TCA 90 bp TGGGTTTCTCCCCGGAACTCTCAAGGATTTCAGTTCCCAATTACCACTTTTATTATACCTGACTATAGATaGAGTAGGTGCCGTCCACCA +
Preference number: 4 (lower is better)
Translates to: WVSPRNSQGFQFPITTFIIPDYR*SRCRPP
Trigger: TGGTGGACGGCACCTACTTCATCTATAGTCAGGTAT...AATAAAAGTGGTAATTGGGAACTGAAATCCTTGAGAGTTCCGGGGAGAAACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374553.6
CDS-3UTR GCA 90 bp TCAAGGATTTCAGTTCCCAATTACCACTTTTATTGGTTCTCTCTAGACCTCAAACCCCAGAGTCTGGAGTaGACCTTTGCTTTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: SRISVPNYHFYWFSLDLKPQSLE*TFAFSG
Trigger: GCCAGAGAAAGCAAAGGTGCACTCCAGACTCTGGGG...TTTGAGGTCTAGAGAGAACCAATAAAAGTGGTAATTGGGAACTGAAATCCTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp GAACTCTCAAGGATTTCAGTTCCCAATTACCACTTTTATTGGTTCTCTCTAGACTCCCACTGCCAAGGATaGTCCTTGGCAGGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: ELSRISVPNYHFYWFSLDSHCQG*SLAGFS
Trigger: AGAGAAACCTGCCAAGGAGCATCCTTGGCAGTGGGA...GTCTAGAGAGAACCAATAAAAGTGGTAATTGGGAACTGAAATCCTTGAGAGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp AACAGGGACCTCGGGGTTGAAGAGTCATGCCATAAGTCAGTCAACATGGAACCAGGAAAATTCTGTTTGTaGCCAGGTAAGCTAAAGAAT +
Preference number: 4 (lower is better)
Translates to: NRDLGVEESCHKSVNMEPGKFCL*PGKLKN
Trigger: ATTCTTTAGCTTACCTGGGCACAAACAGAATTTTCC...TGGTTCCATGTTGACTGACTTATGGCATGACTCTTCAACCCCGAGGTCCCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp GGGTCCTACCATATGATCTGTTGGGAAGCTTGGGGTTTAGGGGAAGGTGAATTTAACGTCCACTTGGGTTaGAGCAAACTTGAACAAAAT +
Preference number: 4 (lower is better)
Translates to: GSYHMICWEAWGLGEGEFNVHLG*SKLEQN
Trigger: ATTTTGTTCAAGTTTGCTGCAACCCAAGTGGACGTT...AAATTCACCTTCCCCTAAACCCCAAGCTTCCCAACAGATCATATGGTAGGACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp TCAAGGATTTCAGTTCCCAATTACCACTTTTATTGGTTCTCTCTAGACCTCAAACAGATCCCTGCTCAGTaGCTAGACACTGGCTTCTCC +
Preference number: 4 (lower is better)
Translates to: SRISVPNYHFYWFSLDLKQIPAQ*LDTGFS
Trigger: GGAGAAGCCAGTGTCTAGGCACTGAGCAGGGATCTG...TTTGAGGTCTAGAGAGAACCAATAAAAGTGGTAATTGGGAACTGAAATCCTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp CTGCTCCAACATTGTGCCAGGAAGATTCTTCTGAACACAAGAGCTCTAAGGCTGTTGGTGAATTTCAGCTaGCTGAAGGAAATTATTCCC +
Preference number: 4 (lower is better)
Translates to: LLQHCARKILLNTRALRLLVNFS*LKEIIP
Trigger: GGGAATAATTTCCTTCAGGCAGCTGAAATTCACCAA...CAGCCTTAGAGCTCTTGTGTTCAGAAGAATCTTCCTGGCACAATGTTGGAGCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp GGGTCCTACCATATGATCTGTTGGGAAGCTTGGGGTTTAGGGGAAGGTGAATTTTCAAATTCCACACAATaGTGTGGTGTAATGGAACAG +
Preference number: 4 (lower is better)
Translates to: GSYHMICWEAWGLGEGEFSNSTQ*CGVMEQ
Trigger: CTGTTCCATTACACCACAGCATTGTGTGGAATTTGA...AAATTCACCTTCCCCTAAACCCCAAGCTTCCCAACAGATCATATGGTAGGACCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp GCTCTGCTGTGGCTTTTTGAAGCCAGAGTGAAGAAAGACTGGGTTAGTACAGCAAGAATGGTATCAGGATaGTCTTTAGGGGCACAATTA +
Preference number: 4 (lower is better)
Translates to: ALLWLFEARVKKDWVSTARMVSG*SLGAQL
Trigger: TAATTGTGCCCCTAAAGAGCATCCTGATACCATTCT...TGCTGTACTAACCCAGTCTTTCTTCACTCTGGCTTCAAAAAGCCACAGCAGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp GCCCACAAATGTCCTCGTCCCATTCTCCATGCAAGCATTGGTCCTCTGGCAAATTTCTCTGAATCTATTTaGATCCACAGGAAGTTACAT +
Preference number: 4 (lower is better)
Translates to: AHKCPRPILHASIGPLANFSESI*IHRKLH
Trigger: ATGTAACTTCCTGTGGATGCAAATAGATTCAGAGAA...ATTTGCCAGAGGACCAATGCTTGCATGGAGAATGGGACGAGGACATTTGTGGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp GCATCTCTGGGTTTCTCCCCGGAACTCTCAAGGATTTCAGTTCCCAATTACCACTTTCTTGTTTTTAACTaGGCCATCTGCTCCTTCATT +
Preference number: 4 (lower is better)
Translates to: ASLGFSPELSRISVPNYHFLVFN*AICSFI
Trigger: AATGAAGGAGCAGATGGCCCAGTTAAAAACAAGAAA...GTGGTAATTGGGAACTGAAATCCTTGAGAGTTCCGGGGAGAAACCCAGAGATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp TGGGTTTCTCCCCGGAACTCTCAAGGATTTCAGTTCCCAATTACCACTTTTATTGAGTTCACCTCACCTTaGGTTGCAAGGCTGTCATTA +
Preference number: 4 (lower is better)
Translates to: WVSPRNSQGFQFPITTFIEFTSP*VARLSL
Trigger: TAATGACAGCCTTGCAACCCAAGGTGAGGTGAACTC...AATAAAAGTGGTAATTGGGAACTGAAATCCTTGAGAGTTCCGGGGAGAAACCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp AACAGGGACCTCGGGGTTGAAGAGTCATGCCATAAGTCAGTCAACATGGAACCAAAAGTCTCTAAGGTATaGTGGAAAGAGATAAGGAGT +
Preference number: 4 (lower is better)
Translates to: NRDLGVEESCHKSVNMEPKVSKV*WKEIRS
Trigger: ACTCCTTATCTCTTTCCACCATACCTTAGAGACTTT...TGGTTCCATGTTGACTGACTTATGGCATGACTCTTCAACCCCGAGGTCCCTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp GCTCTGCTGTGGCTTTTTGAAGCCAGAGTGAAGAAAGACTGGGTTAGTACAGCAGAATCAAGGGTCCAGTaGAGATCCTATTTCCTTTAT +
Preference number: 4 (lower is better)
Translates to: ALLWLFEARVKKDWVSTAESRVQ*RSYFLY
Trigger: ATAAAGGAAATAGGATCTCCACTGGACCCTTGATTC...TGCTGTACTAACCCAGTCTTTCTTCACTCTGGCTTCAAAAAGCCACAGCAGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR TCA 90 bp GAACTCTCAAGGATTTCAGTTCCCAATTACCACTTTTATTGGTTCTCTCTAGACCTACCTGACTATAGATaGAGTAGGTGCCGTCCACCA +
Preference number: 4 (lower is better)
Translates to: ELSRISVPNYHFYWFSLDLPDYR*SRCRPP
Trigger: TGGTGGACGGCACCTACTTCATCTATAGTCAGGTAG...GTCTAGAGAGAACCAATAAAAGTGGTAATTGGGAACTGAAATCCTTGAGAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374552.9
ENST00000616899.1
CDS-3UTR TCA 90 bp GAACTCTCAAGGATTTCAGTTCCCAATTACCACTTTTATTGGTTCTCTCTAGACTGTGCTTGCTCATGTTaGTGGAGATGTCAGCGTGCA +
Preference number: 4 (lower is better)
Translates to: ELSRISVPNYHFYWFSLDCACSC*WRCQRA
Trigger: TGCACGCTGACATCTCCATCAACATGAGCAAGCACA...GTCTAGAGAGAACCAATAAAAGTGGTAATTGGGAACTGAAATCCTTGAGAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR TCA 90 bp GAACTCTCAAGGATTTCAGTTCCCAATTACCACTTTTATTGGTTCTCTCTAGACTTGGAGGGTTCAGAATaGATCAAGGGTCCAGTGGAG +
Preference number: 4 (lower is better)
Translates to: ELSRISVPNYHFYWFSLDLEGSE*IKGPVE
Trigger: CTCCACTGGACCCTTGATTCATTCTGAACCCTCCAA...GTCTAGAGAGAACCAATAAAAGTGGTAATTGGGAACTGAAATCCTTGAGAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR TCA 90 bp ACGACTCGTGTGCTTTTAACAGATCTTCAGAGTGAAGGTGCTGAGAGTGGACAGCATAAGAGAATGAAATaGTGTAGTCAAAGTCCTGGT +
Preference number: 4 (lower is better)
Translates to: TTRVLLTDLQSEGAESGQHKRMK*CSQSPG
Trigger: ACCAGGACTTTGACTACATCATTTCATTCTCTTATG...CTGTCCACTCTCAGCACCTTCACTCTGAAGATCTGTTAAAAGCACACGAGTCGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527388.5
CDS-3UTR GCA 90 bp TCAAGGATTTCAGTTCCCAATTACCACTTTTATTGGTTCTCTCTAGACCTCAAAATGTCTGACTCTTTTTaGCACAGAGCCCCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: SRISVPNYHFYWFSLDLKMSDSF*HRAPGS
Trigger: GCTGCCAGGGGCTCTGTGGCAAAAAGAGTCAGACAT...TTTGAGGTCTAGAGAGAACCAATAAAAGTGGTAATTGGGAACTGAAATCCTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp TCAAGGATTTCAGTTCCCAATTACCACTTTTATTGGTTCTCTCTAGACCTCAAAACTGGGCCAGTCTTGTaGTTTCCAGTCCAGAGGCTA +
Preference number: 4 (lower is better)
Translates to: SRISVPNYHFYWFSLDLKTGPVL*FPVQRL
Trigger: TAGCCTCTGGACTGGAAAGCACAAGACTGGCCCAGT...TTTGAGGTCTAGAGAGAACCAATAAAAGTGGTAATTGGGAACTGAAATCCTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp GCTCTGCTGTGGCTTTTTGAAGCCAGAGTGAAGAAAGACTGGGTTAGTACAGCATTTCTTGTTTTTAACTaGGCCATCTGCTCCTTCATT +
Preference number: 4 (lower is better)
Translates to: ALLWLFEARVKKDWVSTAFLVFN*AICSFI
Trigger: AATGAAGGAGCAGATGGCCCAGTTAAAAACAAGAAA...TGCTGTACTAACCCAGTCTTTCTTCACTCTGGCTTCAAAAAGCCACAGCAGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp TCAAGGATTTCAGTTCCCAATTACCACTTTTATTGGTTCTCTCTAGACCTCAAATGCACCACAGCTGGCTaGTTTTCTCGAGTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: SRISVPNYHFYWFSLDLKCTTAG*FSRVPA
Trigger: AGCTGGAACTCGAGAAAACCAGCCAGCTGTGGTGCA...TTTGAGGTCTAGAGAGAACCAATAAAAGTGGTAATTGGGAACTGAAATCCTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp GAACTCTCAAGGATTTCAGTTCCCAATTACCACTTTTATTGGTTCTCTCTAGACCCAGCCTGGAGTTTGTaGGTGGAAGAAAGAAGATGG +
Preference number: 4 (lower is better)
Translates to: ELSRISVPNYHFYWFSLDPAWSL*VEERRW
Trigger: CCATCTTCTTTCTTCCACCCACAAACTCCAGGCTGG...GTCTAGAGAGAACCAATAAAAGTGGTAATTGGGAACTGAAATCCTTGAGAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR TCA 90 bp TCAAGGATTTCAGTTCCCAATTACCACTTTTATTGGTTCTCTCTAGACCTCAAATGTGGCCATTCCCTGTaGTTGTTCCAAAGCACAGCA +
Preference number: 4 (lower is better)
Translates to: SRISVPNYHFYWFSLDLKCGHSL*LFQSTA
Trigger: TGCTGTGCTTTGGAACAATCACAGGGAATGGCCACA...TTTGAGGTCTAGAGAGAACCAATAAAAGTGGTAATTGGGAACTGAAATCCTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp TCAAGGATTTCAGTTCCCAATTACCACTTTTATTGGTTCTCTCTAGACCTCAAAGCATTTCTCTGCGGCTaGAACACCAATACACCTCAC +
Preference number: 4 (lower is better)
Translates to: SRISVPNYHFYWFSLDLKAFLCG*NTNTPH
Trigger: GTGAGGTGTATTGGTGTTGCAGCCGCAGAGAAATGC...TTTGAGGTCTAGAGAGAACCAATAAAAGTGGTAATTGGGAACTGAAATCCTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp TCAAGGATTTCAGTTCCCAATTACCACTTTTATTGGTTCTCTCTAGACCTCAAAGCGGTGACAATGCTCTaGTGTGGCTTTTTGAAGCCA +
Preference number: 4 (lower is better)
Translates to: SRISVPNYHFYWFSLDLKAVTML*CGFLKP
Trigger: TGGCTTCAAAAAGCCACAGCAGAGCATTGTCACCGC...TTTGAGGTCTAGAGAGAACCAATAAAAGTGGTAATTGGGAACTGAAATCCTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp TCAAGGATTTCAGTTCCCAATTACCACTTTTATTGGTTCTCTCTAGACCTCAAAGCCAAGCAGTGTGGTTaGTTAGAAAGGGAAGGCACA +
Preference number: 4 (lower is better)
Translates to: SRISVPNYHFYWFSLDLKAKQCG*LEREGT
Trigger: TGTGCCTTCCCTTTCTAAGCAACCACACTGCTTGGC...TTTGAGGTCTAGAGAGAACCAATAAAAGTGGTAATTGGGAACTGAAATCCTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp GAACTCTCAAGGATTTCAGTTCCCAATTACCACTTTTATTGGTTCTCTCTAGACTCTACACATGATGGTTaGCTGGTTCCTAGGATGGGT +
Preference number: 4 (lower is better)
Translates to: ELSRISVPNYHFYWFSLDSTHDG*LVPRMG
Trigger: ACCCATCCTAGGAACCAGCCAACCATCATGTGTAGA...GTCTAGAGAGAACCAATAAAAGTGGTAATTGGGAACTGAAATCCTTGAGAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp TGGGTTTCTCCCCGGAACTCTCAAGGATTTCAGTTCCCAATTACCACTTTTATTCAAGCATTGGTCCTCTaGCAAATTCACACCAACATA +
Preference number: 4 (lower is better)
Translates to: WVSPRNSQGFQFPITTFIQALVL*QIHTNI
Trigger: TATGTTGGTGTGAATTTGCCAGAGGACCAATGCTTG...AATAAAAGTGGTAATTGGGAACTGAAATCCTTGAGAGTTCCGGGGAGAAACCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR TCA 90 bp GAACTCTCAAGGATTTCAGTTCCCAATTACCACTTTTATTGGTTCTCTCTAGACATTACCATCGAGGAATaGAATCAGGCATCTCTGGGT +
Preference number: 4 (lower is better)
Translates to: ELSRISVPNYHFYWFSLDITIEE*NQASLG
Trigger: ACCCAGAGATGCCTGATTTCATTCCTCGATGGTAAT...GTCTAGAGAGAACCAATAAAAGTGGTAATTGGGAACTGAAATCCTTGAGAGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp TCAAGGATTTCAGTTCCCAATTACCACTTTTATTGGTTCTCTCTAGACCTCAAACCAAAGAACGTGGTGTaGTTGCTCATGTTGATGGAG +
Preference number: 4 (lower is better)
Translates to: SRISVPNYHFYWFSLDLKPKNVV*LLMLME
Trigger: CTCCATCAACATGAGCAAGCACACCACGTTCTTTGG...TTTGAGGTCTAGAGAGAACCAATAAAAGTGGTAATTGGGAACTGAAATCCTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp GAACTCTCAAGGATTTCAGTTCCCAATTACCACTTTTATTGGTTCTCTCTAGACTACCATATGATCTGTTaGGAAGCTTGGGGTTTAGGG +
Preference number: 4 (lower is better)
Translates to: ELSRISVPNYHFYWFSLDYHMIC*EAWGLG
Trigger: CCCTAAACCCCAAGCTTCCCAACAGATCATATGGTA...GTCTAGAGAGAACCAATAAAAGTGGTAATTGGGAACTGAAATCCTTGAGAGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp GAACTCTCAAGGATTTCAGTTCCCAATTACCACTTTTATTGGTTCTCTCTAGACGTCTGCGGCTTAAACTaGTCAAAACACTCTGAGAGT +
Preference number: 4 (lower is better)
Translates to: ELSRISVPNYHFYWFSLDVCGLN*SKHSES
Trigger: ACTCTCAGAGTGTTTTGACCAGTTTAAGCCGCAGAC...GTCTAGAGAGAACCAATAAAAGTGGTAATTGGGAACTGAAATCCTTGAGAGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp TCAAGGATTTCAGTTCCCAATTACCACTTTTATTGGTTCTCTCTAGACCTCAAACACATGATGGTTGGCTaGTTCCTAGGATGGGTGAAA +
Preference number: 4 (lower is better)
Translates to: SRISVPNYHFYWFSLDLKHMMVG*FLGWVK
Trigger: TTTCACCCATCCTAGGAACCAGCCAACCATCATGTG...TTTGAGGTCTAGAGAGAACCAATAAAAGTGGTAATTGGGAACTGAAATCCTTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp TCAAGGATTTCAGTTCCCAATTACCACTTTTATTGGTTCTCTCTAGACCTCAAATTTAACTGGGCCATCTaGTCCTTCATTGCTTTTGCT +
Preference number: 4 (lower is better)
Translates to: SRISVPNYHFYWFSLDLKFNWAI*SFIAFA
Trigger: AGCAAAAGCAATGAAGGAGCAGATGGCCCAGTTAAA...TTTGAGGTCTAGAGAGAACCAATAAAAGTGGTAATTGGGAACTGAAATCCTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp TCAAGGATTTCAGTTCCCAATTACCACTTTTATTGGTTCTCTCTAGACCTCAAATTCTCTTATGGTCTCTaGCAAAAGCACCTGCCTTTT +
Preference number: 4 (lower is better)
Translates to: SRISVPNYHFYWFSLDLKFSYGL*QKHLPF
Trigger: AAAAGGCAGGTGCTTTTGGCAGAGACCATAAGAGAA...TTTGAGGTCTAGAGAGAACCAATAAAAGTGGTAATTGGGAACTGAAATCCTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp GAACTCTCAAGGATTTCAGTTCCCAATTACCACTTTTATTGGTTCTCTCTAGACTCAAATTCCACACAATaGTGTGGTGTAATGGAACAG +
Preference number: 4 (lower is better)
Translates to: ELSRISVPNYHFYWFSLDSNSTQ*CGVMEQ
Trigger: CTGTTCCATTACACCACAGCATTGTGTGGAATTTGA...GTCTAGAGAGAACCAATAAAAGTGGTAATTGGGAACTGAAATCCTTGAGAGTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp TCAAGGATTTCAGTTCCCAATTACCACTTTTATTGGTTCTCTCTAGACCTCAAACCTCTAGAGTTCCTTTaGAGGGTTCAGAATGAATCA +
Preference number: 4 (lower is better)
Translates to: SRISVPNYHFYWFSLDLKPLEFL*RVQNES
Trigger: TGATTCATTCTGAACCCTCCAAAGGAACTCTAGAGG...TTTGAGGTCTAGAGAGAACCAATAAAAGTGGTAATTGGGAACTGAAATCCTTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR TCA 90 bp GAACTCTCAAGGATTTCAGTTCCCAATTACCACTTTTATTGGTTCTCTCTAGACATTATTTTCCAAACATaGAGGAGTGGTTCTTGTTGG +
Preference number: 4 (lower is better)
Translates to: ELSRISVPNYHFYWFSLDIIFQT*RSGSCW
Trigger: CCAACAAGAACCACTCCTTCATGTTTGGAAAATAAT...GTCTAGAGAGAACCAATAAAAGTGGTAATTGGGAACTGAAATCCTTGAGAGTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CCA 90 bp GAACTCTCAAGGATTTCAGTTCCCAATTACCACTTTTATTGGTTCTCTCTAGACAAAGTCTCTAAGGTATaGTGGAAAGAGATAAGGAGT +
Preference number: 4 (lower is better)
Translates to: ELSRISVPNYHFYWFSLDKVSKV*WKEIRS
Trigger: ACTCCTTATCTCTTTCCACCATACCTTAGAGACTTT...GTCTAGAGAGAACCAATAAAAGTGGTAATTGGGAACTGAAATCCTTGAGAGTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR GCA 90 bp TCAAGGATTTCAGTTCCCAATTACCACTTTTATTGGTTCTCTCTAGACCTCAAATTCTCTGAATCTATTTaGATCCACAGGAAGTTACAT +
Preference number: 4 (lower is better)
Translates to: SRISVPNYHFYWFSLDLKFSESI*IHRKLH
Trigger: ATGTAACTTCCTGTGGATGCAAATAGATTCAGAGAA...TTTGAGGTCTAGAGAGAACCAATAAAAGTGGTAATTGGGAACTGAAATCCTTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS GCA 90 bp GGTCGAGGCCACCGAGGCTGCTTAGGGTGCCAGAGGTGCCAGGGGTaGCCGAGCCGCCAAGGCGGGACTCGGCTCCACGTTCCCGCCGCA +
Preference number: 5 (lower is better)
Translates to: GRGHRGCLGCQRCQG*PSRQGGTRLHVPAA
Trigger: TGCGGCGGGAACGTGGAGCCGAGTCCCGCCTTGGCGGCTCGGGCACCCCTGGCACCTCTGGCACCCTAAGCAGCCTCGGTGGCCTCGACC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000338901.4
ENST00000374548.5
ENST00000374552.9
ENST00000374553.6
ENST00000502251.5
ENST00000524573.5
ENST00000525810.5
ENST00000527388.5
ENST00000533317.5
CDS GCA 90 bp CGGCTACTGTCCTGCCATCGGCTGGGGGCTGCAGGGACCCGTTCCTaGGCGACAGTGGCTGGGCGGGACGGAGCAGGGAGCAGCCGCATG +
Preference number: 5 (lower is better)
Translates to: RLLSCHRLGAAGTRS*ATVAGRDGAGSSRM
Trigger: CATGCGGCTGCTCCCTGCTCCGTCCCGCCCAGCCACTGTCGCGCAGGAACGGGTCCCTGCAGCCCCCAGCCGATGGCAGGACAGTAGCCG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000338901.4
ENST00000374548.5
ENST00000374552.9
ENST00000374553.6
ENST00000502251.5
ENST00000524573.5
ENST00000525810.5
ENST00000527388.5
ENST00000533317.5
CDS GCA 90 bp CCTGGCTCCCTCGCTCCCGCGGCGCTGCTGCAGGCAGGAGTTCCCTaGGCTCCACCTCCGGGTAGCCCATGGCCTCCGGAGACACCCACT +
Preference number: 5 (lower is better)
Translates to: PGSLAPAALLQAGVP*APPPGSPWPPETPT
Trigger: AGTGGGTGTCTCCGGAGGCCATGGGCTACCCGGAGGTGGAGCGCAGGGAACTCCTGCCTGCAGCAGCGCCGCGGGAGCGAGGGAGCCAGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000338901.4
ENST00000374548.5
ENST00000374552.9
ENST00000374553.6
ENST00000502251.5
ENST00000524573.5
ENST00000525810.5
ENST00000527388.5
ENST00000533317.5
CDS GCA 90 bp GGCTGTCAGGGTCGAGGCCACCGAGGCTGCTTAGGGTGCCAGAGGTaGCAGGGGTGCCCGAGCCGCCAAGGCGGGACTCGGCTCCACGTT +
Preference number: 5 (lower is better)
Translates to: GCQGRGHRGCLGCQR*QGCPSRQGGTRLHV
Trigger: AACGTGGAGCCGAGTCCCGCCTTGGCGGCTCGGGCACCCCTGGCACCTCTGGCACCCTAAGCAGCCTCGGTGGCCTCGACCCTGACAGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000338901.4
ENST00000374548.5
ENST00000374552.9
ENST00000374553.6
ENST00000502251.5
ENST00000524573.5
ENST00000525810.5
ENST00000527388.5
ENST00000533317.5
CDS CCA 90 bp CCTGCCATCGGCTGGGGGCTGCAGGGACCCGTTCCTGCGCGACAGTaGCTGGGCGGGACGGAGCAGGGAGCAGCCGCATGTGCAGCTCTA +
Preference number: 5 (lower is better)
Translates to: PAIGWGLQGPVPARQ*LGGTEQGAAACAAL
Trigger: TAGAGCTGCACATGCGGCTGCTCCCTGCTCCGTCCCGCCCAGCCACTGTCGCGCAGGAACGGGTCCCTGCAGCCCCCAGCCGATGGCAGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000338901.4
ENST00000374548.5
ENST00000374552.9
ENST00000374553.6
ENST00000502251.5
ENST00000524573.5
ENST00000525810.5
ENST00000527388.5
ENST00000533317.5
CDS CCA 90 bp AGCCGTTCACGACCTCTGACAGGCGGCTACTGTCCTGCCATCGGCTaGGGGCTGCAGGGACCCGTTCCTGCGCGACAGTGGCTGGGCGGG +
Preference number: 5 (lower is better)
Translates to: SRSRPLTGGYCPAIG*GLQGPVPARQWLGG
Trigger: CCCGCCCAGCCACTGTCGCGCAGGAACGGGTCCCTGCAGCCCCCAGCCGATGGCAGGACAGTAGCCGCCTGTCAGAGGTCGTGAACGGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000338901.4
ENST00000374548.5
ENST00000374552.9
ENST00000374553.6
ENST00000502251.5
ENST00000524573.5
ENST00000525810.5
ENST00000527388.5
ENST00000533317.5
CDS CCA 90 bp CTGCTGCAGGCAGGAGTTCCCTGCGCTCCACCTCCGGGTAGCCCATaGCCTCCGGAGACACCCACTCTCTTGAGGCCCGGGAGCCGCTGC +
Preference number: 5 (lower is better)
Translates to: LLQAGVPCAPPPGSP*PPETPTLLRPGSRC
Trigger: GCAGCGGCTCCCGGGCCTCAAGAGAGTGGGTGTCTCCGGAGGCCATGGGCTACCCGGAGGTGGAGCGCAGGGAACTCCTGCCTGCAGCAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000338901.4
ENST00000374548.5
ENST00000374552.9
ENST00000374553.6
ENST00000502251.5
ENST00000524573.5
ENST00000525810.5
ENST00000527388.5
ENST00000533317.5
CDS TCA 90 bp CTCCACCTCCGGGTAGCCCATGGCCTCCGGAGACACCCACTCTCTTaGGGCCCGGGAGCCGCTGCGTCTGCCTCAGCCGTTCACGACCTC +
Preference number: 5 (lower is better)
Translates to: LHLRVAHGLRRHPLS*GPGAAASASAVHDL
Trigger: GAGGTCGTGAACGGCTGAGGCAGACGCAGCGGCTCCCGGGCCTCAAGAGAGTGGGTGTCTCCGGAGGCCATGGGCTACCCGGAGGTGGAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000338901.4
ENST00000374548.5
ENST00000374552.9
ENST00000374553.6
ENST00000502251.5
ENST00000524573.5
ENST00000525810.5
ENST00000527388.5
ENST00000533317.5
CDS TCA 90 bp CCTGGTCCCTCCCTGGTCCTGCCCTCTAAATTGGCTCGAGGTTGCTaGGTGCTCCCAGGCCCCTGTGGCGGAGGGCCCTCGCCCTACCCG +
Preference number: 5 (lower is better)
Translates to: PGPSLVLPSKLARGC*VLPGPCGGGPSPYP
Trigger: CGGGTAGGGCGAGGGCCCTCCGCCACAGGGGCCTGGGAGCACTCAGCAACCTCGAGCCAATTTAGAGGGCAGGACCAGGGAGGGACCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338901.4
CDS GCA 90 bp GTCCCTCCCTGGTCCTGCCCTCTAAATTGGCTCGAGGTTGCTGAGTaGTCCCAGGCCCCTGTGGCGGAGGGCCCTCGCCCTACCCGCGAG +
Preference number: 5 (lower is better)
Translates to: VPPWSCPLNWLEVAE*SQAPVAEGPRPTRE
Trigger: CTCGCGGGTAGGGCGAGGGCCCTCCGCCACAGGGGCCTGGGAGCACTCAGCAACCTCGAGCCAATTTAGAGGGCAGGACCAGGGAGGGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338901.4
CDS GCA 90 bp CGTCTGCCTCAGCCGTTCACGACCTCTGACAGGCGGCTACTGTCCTaGCATCGGCTGGGGGCTGCAGGGACCCGTTCCTGCGCGACAGTG +
Preference number: 5 (lower is better)
Translates to: RLPQPFTTSDRRLLS*HRLGAAGTRSCATV
Trigger: CACTGTCGCGCAGGAACGGGTCCCTGCAGCCCCCAGCCGATGGCAGGACAGTAGCCGCCTGTCAGAGGTCGTGAACGGCTGAGGCAGACG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000338901.4
ENST00000374548.5
ENST00000374552.9
ENST00000374553.6
ENST00000502251.5
ENST00000524573.5
ENST00000525810.5
ENST00000527388.5
ENST00000533317.5
CDS GCA 90 bp CCTCCGGAGACACCCACTCTCTTGAGGCCCGGGAGCCGCTGCGTCTaGCTCAGCCGTTCACGACCTCTGACAGGCGGCTACTGTCCTGCC +
Preference number: 5 (lower is better)
Translates to: PPETPTLLRPGSRCV*LSRSRPLTGGYCPA
Trigger: GGCAGGACAGTAGCCGCCTGTCAGAGGTCGTGAACGGCTGAGGCAGACGCAGCGGCTCCCGGGCCTCAAGAGAGTGGGTGTCTCCGGAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000338901.4
ENST00000374548.5
ENST00000374552.9
ENST00000374553.6
ENST00000502251.5
ENST00000524573.5
ENST00000525810.5
ENST00000527388.5
ENST00000533317.5
CDS GCA 90 bp CCATGGCCTCCGGAGACACCCACTCTCTTGAGGCCCGGGAGCCGCTaGGTCTGCCTCAGCCGTTCACGACCTCTGACAGGCGGCTACTGT +
Preference number: 5 (lower is better)
Translates to: PWPPETPTLLRPGSR*VCLSRSRPLTGGYC
Trigger: ACAGTAGCCGCCTGTCAGAGGTCGTGAACGGCTGAGGCAGACGCAGCGGCTCCCGGGCCTCAAGAGAGTGGGTGTCTCCGGAGGCCATGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000338901.4
ENST00000374548.5
ENST00000374552.9
ENST00000374553.6
ENST00000502251.5
ENST00000524573.5
ENST00000525810.5
ENST00000527388.5
ENST00000533317.5
CDS TCA 90 bp TCTCCCGGTTCCAATGGCTGCTGCTTAGGTGACGGCTGCCCAAGGTaGCTGGTGATGGGGCTGTCAGGGTCGAGGCCACCGAGGCTGCTT +
Preference number: 5 (lower is better)
Translates to: SPGSNGCCLGDGCPR*LVMGLSGSRPPRLL
Trigger: AAGCAGCCTCGGTGGCCTCGACCCTGACAGCCCCATCACCAGTCACCTTGGGCAGCCGTCACCTAAGCAGCAGCCATTGGAACCGGGAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000338901.4
ENST00000374548.5
ENST00000374552.9
ENST00000374553.6
ENST00000502251.5
ENST00000524573.5
ENST00000525810.5
ENST00000527388.5
ENST00000533317.5
CDS-3UTR CAA 90 bp CAACTTCTCCCTTGCTCGCCTGGTCCCTCCCTGGTCCTGCCCTCTAAATTGGCTGAGACACCCACTCTCTaGAGGCCCGGGAGCCGCTGC +
Preference number: 5 (lower is better)
Translates to: QLLPCSPGPSLVLPSKLAETPTL*RPGSRC
Trigger: GCAGCGGCTCCCGGGCCTCAAGAGAGTGGGTGTCTC...AGCCAATTTAGAGGGCAGGACCAGGGAGGGACCAGGCGAGCAAGGGAGAAGTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338901.4
CDS TCA 90 bp AGAGTGGAGTGCGGCTTCTCCCGGTTCCAATGGCTGCTGCTTAGGTaGCGGCTGCCCAAGGTGACTGGTGATGGGGCTGTCAGGGTCGAG +
Preference number: 5 (lower is better)
Translates to: RVECGFSRFQWLLLR*RLPKVTGDGAVRVE
Trigger: CTCGACCCTGACAGCCCCATCACCAGTCACCTTGGGCAGCCGTCACCTAAGCAGCAGCCATTGGAACCGGGAGAAGCCGCACTCCACTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000338901.4
ENST00000374548.5
ENST00000374552.9
ENST00000374553.6
ENST00000502251.5
ENST00000524573.5
ENST00000525810.5
ENST00000527388.5
ENST00000533317.5
CDS GCA 90 bp GCTGAGAGTGGACAGAGGGAAGACACAACTCATTGGTGTCCCTGGTaGCCGTCCTGGGAGTCAGAGTGGAGTGCGGCTTCTCCCGGTTCC +
Preference number: 5 (lower is better)
Translates to: AESGQREDTTHWCPW*PSWESEWSAASPGS
Trigger: GGAACCGGGAGAAGCCGCACTCCACTCTGACTCCCAGGACGGGCACCAGGGACACCAATGAGTTGTGTCTTCCCTCTGTCCACTCTCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525810.5
CDS CCA 90 bp GGACAGAGGGAAGACACAACTCATTGGTGTCCCTGGTGCCCGTCCTaGGAGTCAGAGTGGAGTGCGGCTTCTCCCGGTTCCAATGGCTGC +
Preference number: 5 (lower is better)
Translates to: GQREDTTHWCPWCPS*ESEWSAASPGSNGC
Trigger: GCAGCCATTGGAACCGGGAGAAGCCGCACTCCACTCTGACTCCCAGGACGGGCACCAGGGACACCAATGAGTTGTGTCTTCCCTCTGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525810.5
CDS CCA 90 bp GGTGCTGAGAGTGGACAGAGGGAAGACACAACTCATTGGTGTCCCTaGTGCCCGTCCTGGGAGTCAGAGTGGAGTGCGGCTTCTCCCGGT +
Preference number: 5 (lower is better)
Translates to: GAESGQREDTTHWCP*CPSWESEWSAASPG
Trigger: ACCGGGAGAAGCCGCACTCCACTCTGACTCCCAGGACGGGCACCAGGGACACCAATGAGTTGTGTCTTCCCTCTGTCCACTCTCAGCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525810.5
CDS-3UTR CAA 90 bp CTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTGGATCTAGCACCCAGAAACCAGATCTTCTGCCGGGCCTaGAGGAGGCAGACGCCTGCG +
Preference number: 5 (lower is better)
Translates to: LYKAGLPRFGLDLAPRNQIFCRA*RRQTPA
Trigger: CGCAGGCGTCTGCCTCCTCAAGGCCCGGCAGAAGAT...CTGGTTTCTGGGTGCTAGATCCAGCCCAAACCTGGGAAGGCCAGCCTTGTACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp CCAGCTGTCTTTTGTGCCAGCTTGGCTGTTGAAGCCCAAGTAACTGGCAGAGACGAGACACCCACTCTCTaGAGGCCCGGGAGCCGCTGC +
Preference number: 5 (lower is better)
Translates to: PAVFCASLAVEAQVTGRDETPTL*RPGSRC
Trigger: GCAGCGGCTCCCGGGCCTCAAGAGAGTGGGTGTCTC...GTCTCTGCCAGTTACTTGGGCTTCAACAGCCAAGCTGGCACAAAAGACAGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374552.9
ENST00000374553.6
CDS-3UTR CAA 90 bp AGGCAGCCCGCAGCCAGGGGCCGCGGGCGCGCGCGAGACTTTCCAAGTCAAGGGACAATCAGTCTCAAATaGCAGGTAAGTGTGAACAAG +
Preference number: 5 (lower is better)
Translates to: RQPAARGRGRARDFPSQGTISLK*QVSVNK
Trigger: CTTGTTCACACTTACCTGCAATTTGAGACTGATTGT...CCCTTGACTTGGAAAGTCTCGCGCGCGCCCGCGGCCCCTGGCTGCGGGCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338901.4
CDS-3UTR CAA 90 bp CTCACTCCACAGCAGCACTTAGAGGTTCTGGGAGTCCTGGCTCCCAAACCCAGGGGCACTGGGCCAGTCTaGTGCTTTCCAGTCCAGAGG +
Preference number: 5 (lower is better)
Translates to: LTPQQHLEVLGVLAPKPRGTGPV*CFPVQR
Trigger: CCTCTGGACTGGAAAGCACAAGACTGGCCCAGTGCC...CCTGGGTTTGGGAGCCAGGACTCCCAGAACCTCTAAGTGCTGCTGTGGAGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS CCA 90 bp CAGAGTGAAGGTGCTGAGAGTGGACAGAGGGAAGACACAACTCATTaGTGTCCCTGGTGCCCGTCCTGGGAGTCAGAGTGGAGTGCGGCT +
Preference number: 5 (lower is better)
Translates to: QSEGAESGQREDTTH*CPWCPSWESEWSAA
Trigger: AGCCGCACTCCACTCTGACTCCCAGGACGGGCACCAGGGACACCAATGAGTTGTGTCTTCCCTCTGTCCACTCTCAGCACCTTCACTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525810.5
CDS-3UTR CAA 90 bp CTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTGGATCTAGCACCCAGAAACCAGTCTGGAGGTTGGTGCTaGCTCACCACTTGGGGCAGG +
Preference number: 5 (lower is better)
Translates to: LYKAGLPRFGLDLAPRNQSGGWC*LTTWGR
Trigger: CCTGCCCCAAGTGGTGAGCAAGCACCAACCTCCAGA...CTGGTTTCTGGGTGCTAGATCCAGCCCAAACCTGGGAAGGCCAGCCTTGTACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS GCA 90 bp CATCTTGACGGCGATCTTCTGCCGGGCCTTGAGGAGGCAGACGCCTaGGGTATAGCAAGTGTTGTAGTTGGTCTTGCCCGTCTCGATGCT +
Preference number: 5 (lower is better)
Translates to: HLDGDLLPGLEEADA*GIASVVVGLARLDA
Trigger: AGCATCGAGACGGGCAAGACCAACTACAACACTTGCTATACCGCAGGCGTCTGCCTCCTCAAGGCCCGGCAGAAGATCGCCGTCAAGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000524573.5
ENST00000616899.1
CDS-3UTR CAA 90 bp CAGACTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTGGATCTAGCACCCAGAAATCAGCGTGCACCATCTaGACGGCGATCTTCTGCCGG +
Preference number: 5 (lower is better)
Translates to: QTVQGWPSQVWAGSSTQKSACTI*TAIFCR
Trigger: CCGGCAGAAGATCGCCGTCAAGATGGTGCACGCTGA...TTTCTGGGTGCTAGATCCAGCCCAAACCTGGGAAGGCCAGCCTTGTACAGTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp ACTTGCTGGCACTGGGCCAGTCTTGTGCTTTCCAGTCCAGAGGCTAGAGCTGGGGGCCAAGCAGTGTGGTaGCTTAGAAAGGGAAGGCAC +
Preference number: 5 (lower is better)
Translates to: TCWHWASLVLSSPEARAGGQAVW*LRKGRH
Trigger: GTGCCTTCCCTTTCTAAGCAACCACACTGCTTGGCC...CCCAGCTCTAGCCTCTGGACTGGAAAGCACAAGACTGGCCCAGTGCCAGCAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS GCA 90 bp GATGCAGGGGCTTCACCCAGCCTGATGGCCCCAAAGAACGTGGTGTaGTTGCTCATGTTGATGGAGATGTCAGCGTGCACCATCTTGACG +
Preference number: 5 (lower is better)
Translates to: DAGASPSLMAPKNVV*LLMLMEMSACTILT
Trigger: CGTCAAGATGGTGCACGCTGACATCTCCATCAACATGAGCAAGCACACCACGTTCTTTGGGGCCATCAGGCTGGGTGAAGCCCCTGCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000524573.5
ENST00000616899.1
CDS-3UTR CAA 90 bp ACGACTCGTGTGCTTTTAACAGATCTTCAGAGTGAAGGTGCTGAGAGTGGACAGGAGACACCCACTCTCTaGAGGCCCGGGAGCCGCTGC +
Preference number: 5 (lower is better)
Translates to: TTRVLLTDLQSEGAESGQETPTL*RPGSRC
Trigger: GCAGCGGCTCCCGGGCCTCAAGAGAGTGGGTGTCTC...CTGTCCACTCTCAGCACCTTCACTCTGAAGATCTGTTAAAAGCACACGAGTCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525810.5
ENST00000527388.5
CDS-3UTR CAA 90 bp AGGCAGCATTACAGTAGCCTAAGGACTTGCTGGCACTGGGCCAGTCTTGTGCTTTCAGCGTGCACCATCTaGACGGCGATCTTCTGCCGG +
Preference number: 5 (lower is better)
Translates to: RQHYSSLRTCWHWASLVLSACTI*TAIFCR
Trigger: CCGGCAGAAGATCGCCGTCAAGATGGTGCACGCTGA...AAGCACAAGACTGGCCCAGTGCCAGCAAGTCCTTAGGCTACTGTAATGCTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp GCCAGCTTGGCTGTTGAAGCCCAAGTAACTGGCAGAGACTCCTGCCATGCCATTGTCTGGAGTGCACCTTaGCTTTCTCTGGCCTGCTGC +
Preference number: 5 (lower is better)
Translates to: ASLAVEAQVTGRDSCHAIVWSAP*LSLACC
Trigger: GCAGCAGGCCAGAGAAAGCAAAGGTGCACTCCAGAC...AATGGCATGGCAGGAGTCTCTGCCAGTTACTTGGGCTTCAACAGCCAAGCTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp GACTCTTTTTGCCACAGAGCCCCTGGCAGCCGAGAGGACGGGTATTACCATCGATCCTATCCTCACCCCTaGCCCTTTCTAGGCCAGGTA +
Preference number: 5 (lower is better)
Translates to: DSFCHRAPGSREDGYYHRSYPHP*PFLGQV
Trigger: TACCTGGCCTAGAAAGGGCAAGGGGTGAGGATAGGA...TCGATGGTAATACCCGTCCTCTCGGCTGCCAGGGGCTCTGTGGCAAAAAGAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp CAAACTTCCCAAAGCCCAGCAAGCTGCCACGGTGTGGCTGTCAGCTGGAGTGGGAATGAAAGGAGGACTTaGCCCACAGTAGGGGCTCTA +
Preference number: 5 (lower is better)
Translates to: QTSQSPASCHGVAVSWSGNERRT*PTVGAL
Trigger: TAGAGCCCCTACTGTGGGCAAAGTCCTCCTTTCATT...CCCACTCCAGCTGACAGCCACACCGTGGCAGCTTGCTGGGCTTTGGGAAGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp AATCAGCTTTCTTCTTTGTGCTCACAGGGCCTAGAGGAGCCTCCAGGCAGGGATGGCACTGGGCCAGTCTaGTGCTTTCCAGTCCAGAGG +
Preference number: 5 (lower is better)
Translates to: NQLSSLCSQGLEEPPGRDGTGPV*CFPVQR
Trigger: CCTCTGGACTGGAAAGCACAAGACTGGCCCAGTGCC...ATCCCTGCCTGGAGGCTCCTCTAGGCCCTGTGAGCACAAAGAAGAAAGCTGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp CTGCTCCAACATTGTGCCAGGAAGATTCTTCTGAACACAAGAGCTCTAAGGCTGATCTTCTGCCGGGCCTaGAGGAGGCAGACGCCTGCG +
Preference number: 5 (lower is better)
Translates to: LLQHCARKILLNTRALRLIFCRA*RRQTPA
Trigger: CGCAGGCGTCTGCCTCCTCAAGGCCCGGCAGAAGAT...CAGCCTTAGAGCTCTTGTGTTCAGAAGAATCTTCCTGGCACAATGTTGGAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp CAGACTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTGGATCTAGCACCCAGAAAAAAGTCAAGCAGGCCTaGTCACCCTGGAGTCACTGG +
Preference number: 5 (lower is better)
Translates to: QTVQGWPSQVWAGSSTQKKVKQA*SPWSHW
Trigger: CCAGTGACTCCAGGGTGACAAGGCCTGCTTGACTTT...TTTCTGGGTGCTAGATCCAGCCCAAACCTGGGAAGGCCAGCCTTGTACAGTCTG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp AGGCAGCATTACAGTAGCCTAAGGACTTGCTGGCACTGGGCCAGTCTTGTGCTTGTCTGGAGTGCACCTTaGCTTTCTCTGGCCTGCTGC +
Preference number: 5 (lower is better)
Translates to: RQHYSSLRTCWHWASLVLVWSAP*LSLACC
Trigger: GCAGCAGGCCAGAGAAAGCAAAGGTGCACTCCAGAC...AAGCACAAGACTGGCCCAGTGCCAGCAAGTCCTTAGGCTACTGTAATGCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp TTTCAGGAACAAGAGGAGCAGACTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTGTCTGGAGTGCACCTTaGCTTTCTCTGGCCTGCTGC +
Preference number: 5 (lower is better)
Translates to: FQEQEEQTVQGWPSQVWAVWSAP*LSLACC
Trigger: GCAGCAGGCCAGAGAAAGCAAAGGTGCACTCCAGAC...AGCCCAAACCTGGGAAGGCCAGCCTTGTACAGTCTGCTCCTCTTGTTCCTGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp CAGACTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTGGATCTAGCACCCAGAAATCCTATCCTCACCCCTaGCCCTTTCTAGGCCAGGTA +
Preference number: 5 (lower is better)
Translates to: QTVQGWPSQVWAGSSTQKSYPHP*PFLGQV
Trigger: TACCTGGCCTAGAAAGGGCAAGGGGTGAGGATAGGA...TTTCTGGGTGCTAGATCCAGCCCAAACCTGGGAAGGCCAGCCTTGTACAGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp GACTCTTTTTGCCACAGAGCCCCTGGCAGCCGAGAGGACGGGTATTACCATCGAGGAGTTCACCTCACCTaGGGTTGCAAGGCTGTCATT +
Preference number: 5 (lower is better)
Translates to: DSFCHRAPGSREDGYYHRGVHLT*GCKAVI
Trigger: AATGACAGCCTTGCAACCCAAGGTGAGGTGAACTCC...TCGATGGTAATACCCGTCCTCTCGGCTGCCAGGGGCTCTGTGGCAAAAAGAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp GCCCACAAATGTCCTCGTCCCATTCTCCATGCAAGCATTGGTCCTCTGGCAAATTCTGGAGGTTGGTGCTaGCTCACCACTTGGGGCAGG +
Preference number: 5 (lower is better)
Translates to: AHKCPRPILHASIGPLANSGGWC*LTTWGR
Trigger: CCTGCCCCAAGTGGTGAGCAAGCACCAACCTCCAGA...ATTTGCCAGAGGACCAATGCTTGCATGGAGAATGGGACGAGGACATTTGTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp CTCACTCCACAGCAGCACTTAGAGGTTCTGGGAGTCCTGGCTCCCAAACCCAGGCTTCCAGCCTGGAGTTaGTGGGTGGAAGAAAGAAGA +
Preference number: 5 (lower is better)
Translates to: LTPQQHLEVLGVLAPKPRLPAWS*WVEERR
Trigger: TCTTCTTTCTTCCACCCACAAACTCCAGGCTGGAAG...CCTGGGTTTGGGAGCCAGGACTCCCAGAACCTCTAAGTGCTGCTGTGGAGTGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp CTGAGAGACCCTGGTAGTATCAAAGTCTCTAAGGTATGGTGGAAAGAGATAAGGGAGACACCCACTCTCTaGAGGCCCGGGAGCCGCTGC +
Preference number: 5 (lower is better)
Translates to: LRDPGSIKVSKVWWKEIRETPTL*RPGSRC
Trigger: GCAGCGGCTCCCGGGCCTCAAGAGAGTGGGTGTCTC...CCTTATCTCTTTCCACCATACCTTAGAGACTTTGATACTACCAGGGTCTCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374552.9
ENST00000374553.6
CDS-3UTR CAA 90 bp ACAGTTATTACAGCTGTTTACAGCTCCAACTCCAAAGGGGAGCCTGCTGGTTCTTGGGCAACTTCTCCCTaGCTCGCCTGGTCCCTCCCT +
Preference number: 5 (lower is better)
Translates to: TVITAVYSSNSKGEPAGSWATSP*LAWSLP
Trigger: AGGGAGGGACCAGGCGAGCAAGGGAGAAGTTGCCCA...AGAACCAGCAGGCTCCCCTTTGGAGTTGGAGCTGTAAACAGCTGTAATAACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338901.4
CDS-3UTR CAA 90 bp TTTCAGGAACAAGAGGAGCAGACTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTAAAGTCAAGCAGGCCTaGTCACCCTGGAGTCACTGG +
Preference number: 5 (lower is better)
Translates to: FQEQEEQTVQGWPSQVWAKVKQA*SPWSHW
Trigger: CCAGTGACTCCAGGGTGACAAGGCCTGCTTGACTTT...AGCCCAAACCTGGGAAGGCCAGCCTTGTACAGTCTGCTCCTCTTGTTCCTGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp ACTTGCTGGCACTGGGCCAGTCTTGTGCTTTCCAGTCCAGAGGCTAGAGCTGGGCTACCATATGATCTGTaGGGAAGCTTGGGGTTTAGG +
Preference number: 5 (lower is better)
Translates to: TCWHWASLVLSSPEARAGLPYDL*GSLGFR
Trigger: CCTAAACCCCAAGCTTCCCAACAGATCATATGGTAG...CCCAGCTCTAGCCTCTGGACTGGAAAGCACAAGACTGGCCCAGTGCCAGCAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp GGGACTTCTGGAGGTCATCCCGTCCAACCCTTCGTCCCCAGACAGAATTTGATTGGCCAAGCAGTGTGGTaGCTTAGAAAGGGAAGGCAC +
Preference number: 5 (lower is better)
Translates to: GTSGGHPVQPFVPRQNLIGQAVW*LRKGRH
Trigger: GTGCCTTCCCTTTCTAAGCAACCACACTGCTTGGCC...AATCAAATTCTGTCTGGGGACGAAGGGTTGGACGGGATGACCTCCAGAAGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp CTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTGGATCTAGCACCCAGAAACCAGCCTGCTGCTCCAACATaGTGCCAGGAAGATTCTTCT +
Preference number: 5 (lower is better)
Translates to: LYKAGLPRFGLDLAPRNQPAAPT*CQEDSS
Trigger: AGAAGAATCTTCCTGGCACAATGTTGGAGCAGCAGG...CTGGTTTCTGGGTGCTAGATCCAGCCCAAACCTGGGAAGGCCAGCCTTGTACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp TTTCAGGAACAAGAGGAGCAGACTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTCTCCCCAGCTACCTATaGCTTCCCTCATCATCCCTC +
Preference number: 5 (lower is better)
Translates to: FQEQEEQTVQGWPSQVWALPSYL*LPSSSL
Trigger: GAGGGATGATGAGGGAAGCAATAGGTAGCTGGGGAG...AGCCCAAACCTGGGAAGGCCAGCCTTGTACAGTCTGCTCCTCTTGTTCCTGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp AATCAGCTTTCTTCTTTGTGCTCACAGGGCCTAGAGGAGCCTCCAGGCAGGGATCTCCCCAGCTACCTATaGCTTCCCTCATCATCCCTC +
Preference number: 5 (lower is better)
Translates to: NQLSSLCSQGLEEPPGRDLPSYL*LPSSSL
Trigger: GAGGGATGATGAGGGAAGCAATAGGTAGCTGGGGAG...ATCCCTGCCTGGAGGCTCCTCTAGGCCCTGTGAGCACAAAGAAGAAAGCTGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp ACTTGCTGGCACTGGGCCAGTCTTGTGCTTTCCAGTCCAGAGGCTAGAGCTGGGTTCTCCATGCAAGCATaGGTCCTCTGGCAAATTCAC +
Preference number: 5 (lower is better)
Translates to: TCWHWASLVLSSPEARAGFSMQA*VLWQIH
Trigger: GTGAATTTGCCAGAGGACCAATGCTTGCATGGAGAA...CCCAGCTCTAGCCTCTGGACTGGAAAGCACAAGACTGGCCCAGTGCCAGCAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp CAGACTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTGGATCTAGCACCCAGAAAACCTCTGTCATCTGCTaGCCCACAAATGTCCTCGTC +
Preference number: 5 (lower is better)
Translates to: QTVQGWPSQVWAGSSTQKTSVIC*PTNVLV
Trigger: GACGAGGACATTTGTGGGCAAGCAGATGACAGAGGT...TTTCTGGGTGCTAGATCCAGCCCAAACCTGGGAAGGCCAGCCTTGTACAGTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp GACTCTTTTTGCCACAGAGCCCCTGGCAGCCGAGAGGACGGGTATTACCATCGAGTCTTTTGTGCCAGCTaGGCTGTTGAAGCCCAAGTA +
Preference number: 5 (lower is better)
Translates to: DSFCHRAPGSREDGYYHRVFCAS*AVEAQV
Trigger: TACTTGGGCTTCAACAGCCAAGCTGGCACAAAAGAC...TCGATGGTAATACCCGTCCTCTCGGCTGCCAGGGGCTCTGTGGCAAAAAGAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp CAAACTTCCCAAAGCCCAGCAAGCTGCCACGGTGTGGCTGTCAGCTGGAGTGGGCATGGATCAAAGTCTTaGTTTACCTCCAGGGTTCCT +
Preference number: 5 (lower is better)
Translates to: QTSQSPASCHGVAVSWSGHGSKS*FTSRVP
Trigger: AGGAACCCTGGAGGTAAACAAAGACTTTGATCCATG...CCCACTCCAGCTGACAGCCACACCGTGGCAGCTTGCTGGGCTTTGGGAAGTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp CTCACTCCACAGCAGCACTTAGAGGTTCTGGGAGTCCTGGCTCCCAAACCCAGGTGTAGCTTAAACACCTaGGGGTTCATAGTGATGCGA +
Preference number: 5 (lower is better)
Translates to: LTPQQHLEVLGVLAPKPRCSLNT*GFIVMR
Trigger: TCGCATCACTATGAACCCCAAGGTGTTTAAGCTACA...CCTGGGTTTGGGAGCCAGGACTCCCAGAACCTCTAAGTGCTGCTGTGGAGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp GGGTCCTACCATATGATCTGTTGGGAAGCTTGGGGTTTAGGGGAAGGTGAATTTTCAGCGTGCACCATCTaGACGGCGATCTTCTGCCGG +
Preference number: 5 (lower is better)
Translates to: GSYHMICWEAWGLGEGEFSACTI*TAIFCR
Trigger: CCGGCAGAAGATCGCCGTCAAGATGGTGCACGCTGA...AAATTCACCTTCCCCTAAACCCCAAGCTTCCCAACAGATCATATGGTAGGACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp CAGACTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTGGATCTAGCACCCAGAAATGCCAAGGATGCTCCTaGGCAGGTTTCTCTTATGGT +
Preference number: 5 (lower is better)
Translates to: QTVQGWPSQVWAGSSTQKCQGCS*AGFSYG
Trigger: ACCATAAGAGAAACCTGCCAAGGAGCATCCTTGGCA...TTTCTGGGTGCTAGATCCAGCCCAAACCTGGGAAGGCCAGCCTTGTACAGTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp AATCAGCTTTCTTCTTTGTGCTCACAGGGCCTAGAGGAGCCTCCAGGCAGGGATACCTCTGTCATCTGCTaGCCCACAAATGTCCTCGTC +
Preference number: 5 (lower is better)
Translates to: NQLSSLCSQGLEEPPGRDTSVIC*PTNVLV
Trigger: GACGAGGACATTTGTGGGCAAGCAGATGACAGAGGT...ATCCCTGCCTGGAGGCTCCTCTAGGCCCTGTGAGCACAAAGAAGAAAGCTGATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp GCTCTGCTGTGGCTTTTTGAAGCCAGAGTGAAGAAAGACTGGGTTAGTACAGCATCTGGAGGTTGGTGCTaGCTCACCACTTGGGGCAGG +
Preference number: 5 (lower is better)
Translates to: ALLWLFEARVKKDWVSTASGGWC*LTTWGR
Trigger: CCTGCCCCAAGTGGTGAGCAAGCACCAACCTCCAGA...TGCTGTACTAACCCAGTCTTTCTTCACTCTGGCTTCAAAAAGCCACAGCAGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp GCTCTGCTGTGGCTTTTTGAAGCCAGAGTGAAGAAAGACTGGGTTAGTACAGCAGGCACTGGGCCAGTCTaGTGCTTTCCAGTCCAGAGG +
Preference number: 5 (lower is better)
Translates to: ALLWLFEARVKKDWVSTAGTGPV*CFPVQR
Trigger: CCTCTGGACTGGAAAGCACAAGACTGGCCCAGTGCC...TGCTGTACTAACCCAGTCTTTCTTCACTCTGGCTTCAAAAAGCCACAGCAGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp CTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTGGATCTAGCACCCAGAAACCAGCTTTTGCTTCTTTTATaGCGGCGAACACGCCTACTT +
Preference number: 5 (lower is better)
Translates to: LYKAGLPRFGLDLAPRNQLLLLL*RRTRLL
Trigger: AAGTAGGCGTGTTCGCCGCAATAAAAGAAGCAAAAG...CTGGTTTCTGGGTGCTAGATCCAGCCCAAACCTGGGAAGGCCAGCCTTGTACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp GACTCTTTTTGCCACAGAGCCCCTGGCAGCCGAGAGGACGGGTATTACCATCGAGCTCCTTCATTGCTTTaGCTTCTTTTATTGCGGCGA +
Preference number: 5 (lower is better)
Translates to: DSFCHRAPGSREDGYYHRAPSLL*LLLLRR
Trigger: TCGCCGCAATAAAAGAAGCAAAAGCAATGAAGGAGC...TCGATGGTAATACCCGTCCTCTCGGCTGCCAGGGGCTCTGTGGCAAAAAGAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp CCAGCTGTCTTTTGTGCCAGCTTGGCTGTTGAAGCCCAAGTAACTGGCAGAGACATGCGAGACCAGTCATaGAGCACTCCACCTGAAAGA +
Preference number: 5 (lower is better)
Translates to: PAVFCASLAVEAQVTGRDMRDQS*STPPER
Trigger: TCTTTCAGGTGGAGTGCTCAATGACTGGTCTCGCAT...GTCTCTGCCAGTTACTTGGGCTTCAACAGCCAAGCTGGCACAAAAGACAGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp TTTCAGGAACAAGAGGAGCAGACTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTTGCCAAGGATGCTCCTaGGCAGGTTTCTCTTATGGT +
Preference number: 5 (lower is better)
Translates to: FQEQEEQTVQGWPSQVWACQGCS*AGFSYG
Trigger: ACCATAAGAGAAACCTGCCAAGGAGCATCCTTGGCA...AGCCCAAACCTGGGAAGGCCAGCCTTGTACAGTCTGCTCCTCTTGTTCCTGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp AAGCTAAAGAATATCCCAGACTCACATGACCACAGGTCCCAGGTTAGGCACCTGCTTAGGCGGGCAGGTTaGTGGCCATTCCCTGTGATT +
Preference number: 5 (lower is better)
Translates to: KLKNIPDSHDHRSQVRHLLRRAG*WPFPVI
Trigger: AATCACAGGGAATGGCCACAAACCTGCCCGCCTAAG...CAGGTGCCTAACCTGGGACCTGTGGTCATGTGAGTCTGGGATATTCTTTAGCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp AACAGGGACCTCGGGGTTGAAGAGTCATGCCATAAGTCAGTCAACATGGAACCACTTAGGCGGGCAGGTTaGTGGCCATTCCCTGTGATT +
Preference number: 5 (lower is better)
Translates to: NRDLGVEESCHKSVNMEPLRRAG*WPFPVI
Trigger: AATCACAGGGAATGGCCACAAACCTGCCCGCCTAAG...TGGTTCCATGTTGACTGACTTATGGCATGACTCTTCAACCCCGAGGTCCCTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp AACATAAAGGCCACAAGTTCTGTGGGTCCCAGAGGCCTGCTGCTCCAACATTGTACCTCTGTCATCTGCTaGCCCACAAATGTCCTCGTC +
Preference number: 5 (lower is better)
Translates to: NIKATSSVGPRGLLLQHCTSVIC*PTNVLV
Trigger: GACGAGGACATTTGTGGGCAAGCAGATGACAGAGGT...ACAATGTTGGAGCAGCAGGCCTCTGGGACCCACAGAACTTGTGGCCTTTATGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp ACGACTCGTGTGCTTTTAACAGATCTTCAGAGTGAAGGTGCTGAGAGTGGACAGGGAAGACACAACTCATaGGTGTCCCTGGTGCCCGTC +
Preference number: 5 (lower is better)
Translates to: TTRVLLTDLQSEGAESGQGRHNS*VSLVPV
Trigger: GACGGGCACCAGGGACACCAATGAGTTGTGTCTTCC...CTGTCCACTCTCAGCACCTTCACTCTGAAGATCTGTTAAAAGCACACGAGTCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525810.5
CDS-3UTR CAA 90 bp GGAAGACACAACTCATTGGTGTCCAAAGGAATATCCATTAGAATATCAGTGGATGAGACACCCACTCTCTaGAGGCCCGGGAGCCGCTGC +
Preference number: 5 (lower is better)
Translates to: GRHNSLVSKGISIRISVDETPTL*RPGSRC
Trigger: GCAGCGGCTCCCGGGCCTCAAGAGAGTGGGTGTCTC...ATCCACTGATATTCTAATGGATATTCCTTTGGACACCAATGAGTTGTGTCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527388.5
CDS-3UTR CAA 90 bp CAAACTTCCCAAAGCCCAGCAAGCTGCCACGGTGTGGCTGTCAGCTGGAGTGGGTTCTTTCCCTTTTTCTaGTTTTTAACTGGGCCATCT +
Preference number: 5 (lower is better)
Translates to: QTSQSPASCHGVAVSWSGFFPFF*FLTGPS
Trigger: AGATGGCCCAGTTAAAAACAAGAAAAAGGGAAAGAA...CCCACTCCAGCTGACAGCCACACCGTGGCAGCTTGCTGGGCTTTGGGAAGTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp AATCAGCTTTCTTCTTTGTGCTCACAGGGCCTAGAGGAGCCTCCAGGCAGGGATAAGAACGTGGTGTGCTaGCTCATGTTGATGGAGATG +
Preference number: 5 (lower is better)
Translates to: NQLSSLCSQGLEEPPGRDKNVVC*LMLMEM
Trigger: CATCTCCATCAACATGAGCAAGCACACCACGTTCTT...ATCCCTGCCTGGAGGCTCCTCTAGGCCCTGTGAGCACAAAGAAGAAAGCTGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp CCAGCTGTCTTTTGTGCCAGCTTGGCTGTTGAAGCCCAAGTAACTGGCAGAGACTGGGTTGCAGCAAACTaGAACAAAATCCCTCTGTCC +
Preference number: 5 (lower is better)
Translates to: PAVFCASLAVEAQVTGRDWVAAN*NKIPLS
Trigger: GGACAGAGGGATTTTGTTCAAGTTTGCTGCAACCCA...GTCTCTGCCAGTTACTTGGGCTTCAACAGCCAAGCTGGCACAAAAGACAGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp AACATAAAGGCCACAAGTTCTGTGGGTCCCAGAGGCCTGCTGCTCCAACATTGTTGGCCTAACGTCCACTaGGGTTGCAGCAAACTTGAA +
Preference number: 5 (lower is better)
Translates to: NIKATSSVGPRGLLLQHCWPNVH*GCSKLE
Trigger: TTCAAGTTTGCTGCAACCCAAGTGGACGTTAGGCCA...ACAATGTTGGAGCAGCAGGCCTCTGGGACCCACAGAACTTGTGGCCTTTATGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp AGGCAGCATTACAGTAGCCTAAGGACTTGCTGGCACTGGGCCAGTCTTGTGCTTCTACCATATGATCTGTaGGGAAGCTTGGGGTTTAGG +
Preference number: 5 (lower is better)
Translates to: RQHYSSLRTCWHWASLVLLPYDL*GSLGFR
Trigger: CCTAAACCCCAAGCTTCCCAACAGATCATATGGTAG...AAGCACAAGACTGGCCCAGTGCCAGCAAGTCCTTAGGCTACTGTAATGCTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp CTGCTCCAACATTGTGCCAGGAAGATTCTTCTGAACACAAGAGCTCTAAGGCTGCTCCCCAGCTACCTATaGCTTCCCTCATCATCCCTC +
Preference number: 5 (lower is better)
Translates to: LLQHCARKILLNTRALRLLPSYL*LPSSSL
Trigger: GAGGGATGATGAGGGAAGCAATAGGTAGCTGGGGAG...CAGCCTTAGAGCTCTTGTGTTCAGAAGAATCTTCCTGGCACAATGTTGGAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp GCCCACAAATGTCCTCGTCCCATTCTCCATGCAAGCATTGGTCCTCTGGCAAATGTCTTTTGTGCCAGCTaGGCTGTTGAAGCCCAAGTA +
Preference number: 5 (lower is better)
Translates to: AHKCPRPILHASIGPLANVFCAS*AVEAQV
Trigger: TACTTGGGCTTCAACAGCCAAGCTGGCACAAAAGAC...ATTTGCCAGAGGACCAATGCTTGCATGGAGAATGGGACGAGGACATTTGTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp GCCCACAAATGTCCTCGTCCCATTCTCCATGCAAGCATTGGTCCTCTGGCAAATCTTCCAGCCTGGAGTTaGTGGGTGGAAGAAAGAAGA +
Preference number: 5 (lower is better)
Translates to: AHKCPRPILHASIGPLANLPAWS*WVEERR
Trigger: TCTTCTTTCTTCCACCCACAAACTCCAGGCTGGAAG...ATTTGCCAGAGGACCAATGCTTGCATGGAGAATGGGACGAGGACATTTGTGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp AATCAGCTTTCTTCTTTGTGCTCACAGGGCCTAGAGGAGCCTCCAGGCAGGGATAATCAGCTTTCTTCTTaGTGCTCACAGGGCCTAGAG +
Preference number: 5 (lower is better)
Translates to: NQLSSLCSQGLEEPPGRDNQLSS*CSQGLE
Trigger: CTCTAGGCCCTGTGAGCACAAAGAAGAAAGCTGATT...ATCCCTGCCTGGAGGCTCCTCTAGGCCCTGTGAGCACAAAGAAGAAAGCTGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp GGGACTTCTGGAGGTCATCCCGTCCAACCCTTCGTCCCCAGACAGAATTTGATTAATCAGCTTTCTTCTTaGTGCTCACAGGGCCTAGAG +
Preference number: 5 (lower is better)
Translates to: GTSGGHPVQPFVPRQNLINQLSS*CSQGLE
Trigger: CTCTAGGCCCTGTGAGCACAAAGAAGAAAGCTGATT...AATCAAATTCTGTCTGGGGACGAAGGGTTGGACGGGATGACCTCCAGAAGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp AACAGGGACCTCGGGGTTGAAGAGTCATGCCATAAGTCAGTCAACATGGAACCAATGCGAGACCAGTCATaGAGCACTCCACCTGAAAGA +
Preference number: 5 (lower is better)
Translates to: NRDLGVEESCHKSVNMEPMRDQS*STPPER
Trigger: TCTTTCAGGTGGAGTGCTCAATGACTGGTCTCGCAT...TGGTTCCATGTTGACTGACTTATGGCATGACTCTTCAACCCCGAGGTCCCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp AAGCTAAAGAATATCCCAGACTCACATGACCACAGGTCCCAGGTTAGGCACCTGATGCGAGACCAGTCATaGAGCACTCCACCTGAAAGA +
Preference number: 5 (lower is better)
Translates to: KLKNIPDSHDHRSQVRHLMRDQS*STPPER
Trigger: TCTTTCAGGTGGAGTGCTCAATGACTGGTCTCGCAT...CAGGTGCCTAACCTGGGACCTGTGGTCATGTGAGTCTGGGATATTCTTTAGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp CCAGCTGTCTTTTGTGCCAGCTTGGCTGTTGAAGCCCAAGTAACTGGCAGAGACTGTAGCTTAAACACCTaGGGGTTCATAGTGATGCGA +
Preference number: 5 (lower is better)
Translates to: PAVFCASLAVEAQVTGRDCSLNT*GFIVMR
Trigger: TCGCATCACTATGAACCCCAAGGTGTTTAAGCTACA...GTCTCTGCCAGTTACTTGGGCTTCAACAGCCAAGCTGGCACAAAAGACAGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp GAACTCTCAAGGATTTCAGTTCCCAATTACCACTTTTATTGGTTCTCTCTAGACATCTTCTGCCGGGCCTaGAGGAGGCAGACGCCTGCG +
Preference number: 5 (lower is better)
Translates to: ELSRISVPNYHFYWFSLDIFCRA*RRQTPA
Trigger: CGCAGGCGTCTGCCTCCTCAAGGCCCGGCAGAAGAT...GTCTAGAGAGAACCAATAAAAGTGGTAATTGGGAACTGAAATCCTTGAGAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp AACATAAAGGCCACAAGTTCTGTGGGTCCCAGAGGCCTGCTGCTCCAACATTGTAAGAACGTGGTGTGCTaGCTCATGTTGATGGAGATG +
Preference number: 5 (lower is better)
Translates to: NIKATSSVGPRGLLLQHCKNVVC*LMLMEM
Trigger: CATCTCCATCAACATGAGCAAGCACACCACGTTCTT...ACAATGTTGGAGCAGCAGGCCTCTGGGACCCACAGAACTTGTGGCCTTTATGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp AACAGGGACCTCGGGGTTGAAGAGTCATGCCATAAGTCAGTCAACATGGAACCAAAGTACCCGCTGTTCTaGGTGAATTTCAGCTGCCTG +
Preference number: 5 (lower is better)
Translates to: NRDLGVEESCHKSVNMEPKYPLF*VNFSCL
Trigger: CAGGCAGCTGAAATTCACCAAGAACAGCGGGTACTT...TGGTTCCATGTTGACTGACTTATGGCATGACTCTTCAACCCCGAGGTCCCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp CTGCTCCAACATTGTGCCAGGAAGATTCTTCTGAACACAAGAGCTCTAAGGCTGGGAGTTCACCTCACCTaGGGTTGCAAGGCTGTCATT +
Preference number: 5 (lower is better)
Translates to: LLQHCARKILLNTRALRLGVHLT*GCKAVI
Trigger: AATGACAGCCTTGCAACCCAAGGTGAGGTGAACTCC...CAGCCTTAGAGCTCTTGTGTTCAGAAGAATCTTCCTGGCACAATGTTGGAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp GCTCTGCTGTGGCTTTTTGAAGCCAGAGTGAAGAAAGACTGGGTTAGTACAGCAGGAGTTCACCTCACCTaGGGTTGCAAGGCTGTCATT +
Preference number: 5 (lower is better)
Translates to: ALLWLFEARVKKDWVSTAGVHLT*GCKAVI
Trigger: AATGACAGCCTTGCAACCCAAGGTGAGGTGAACTCC...TGCTGTACTAACCCAGTCTTTCTTCACTCTGGCTTCAAAAAGCCACAGCAGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp AAGCTAAAGAATATCCCAGACTCACATGACCACAGGTCCCAGGTTAGGCACCTGAATGAAAGGAGGACTTaGCCCACAGTAGGGGCTCTA +
Preference number: 5 (lower is better)
Translates to: KLKNIPDSHDHRSQVRHLNERRT*PTVGAL
Trigger: TAGAGCCCCTACTGTGGGCAAAGTCCTCCTTTCATT...CAGGTGCCTAACCTGGGACCTGTGGTCATGTGAGTCTGGGATATTCTTTAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp AGGCAGCATTACAGTAGCCTAAGGACTTGCTGGCACTGGGCCAGTCTTGTGCTTCATGGATCAAAGTCTTaGTTTACCTCCAGGGTTCCT +
Preference number: 5 (lower is better)
Translates to: RQHYSSLRTCWHWASLVLHGSKS*FTSRVP
Trigger: AGGAACCCTGGAGGTAAACAAAGACTTTGATCCATG...AAGCACAAGACTGGCCCAGTGCCAGCAAGTCCTTAGGCTACTGTAATGCTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp GGGACTTCTGGAGGTCATCCCGTCCAACCCTTCGTCCCCAGACAGAATTTGATTATGAAGGAGTGGTTCTaGTTGGTTTCTGCTACAACT +
Preference number: 5 (lower is better)
Translates to: GTSGGHPVQPFVPRQNLIMKEWF*LVSATT
Trigger: AGTTGTAGCAGAAACCAACAAGAACCACTCCTTCAT...AATCAAATTCTGTCTGGGGACGAAGGGTTGGACGGGATGACCTCCAGAAGTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp GCATCTCTGGGTTTCTCCCCGGAACTCTCAAGGATTTCAGTTCCCAATTACCACTGTAATGGAACAGCTTaGGAGTCAGACCTGGCTGAA +
Preference number: 5 (lower is better)
Translates to: ASLGFSPELSRISVPNYHCNGTA*ESDLAE
Trigger: TTCAGCCAGGTCTGACTCCAAAGCTGTTCCATTACA...GTGGTAATTGGGAACTGAAATCCTTGAGAGTTCCGGGGAGAAACCCAGAGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp AACAGGGACCTCGGGGTTGAAGAGTCATGCCATAAGTCAGTCAACATGGAACCATGTAATGGAACAGCTTaGGAGTCAGACCTGGCTGAA +
Preference number: 5 (lower is better)
Translates to: NRDLGVEESCHKSVNMEPCNGTA*ESDLAE
Trigger: TTCAGCCAGGTCTGACTCCAAAGCTGTTCCATTACA...TGGTTCCATGTTGACTGACTTATGGCATGACTCTTCAACCCCGAGGTCCCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp AAGCTAAAGAATATCCCAGACTCACATGACCACAGGTCCCAGGTTAGGCACCTGTGTAATGGAACAGCTTaGGAGTCAGACCTGGCTGAA +
Preference number: 5 (lower is better)
Translates to: KLKNIPDSHDHRSQVRHLCNGTA*ESDLAE
Trigger: TTCAGCCAGGTCTGACTCCAAAGCTGTTCCATTACA...CAGGTGCCTAACCTGGGACCTGTGGTCATGTGAGTCTGGGATATTCTTTAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp GCTCTGCTGTGGCTTTTTGAAGCCAGAGTGAAGAAAGACTGGGTTAGTACAGCACCTGCTGCTCCAACATaGTGCCAGGAAGATTCTTCT +
Preference number: 5 (lower is better)
Translates to: ALLWLFEARVKKDWVSTAPAAPT*CQEDSS
Trigger: AGAAGAATCTTCCTGGCACAATGTTGGAGCAGCAGG...TGCTGTACTAACCCAGTCTTTCTTCACTCTGGCTTCAAAAAGCCACAGCAGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp GGGTCCTACCATATGATCTGTTGGGAAGCTTGGGGTTTAGGGGAAGGTGAATTTAATGAAAGGAGGACTTaGCCCACAGTAGGGGCTCTA +
Preference number: 5 (lower is better)
Translates to: GSYHMICWEAWGLGEGEFNERRT*PTVGAL
Trigger: TAGAGCCCCTACTGTGGGCAAAGTCCTCCTTTCATT...AAATTCACCTTCCCCTAAACCCCAAGCTTCCCAACAGATCATATGGTAGGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp GCATCTCTGGGTTTCTCCCCGGAACTCTCAAGGATTTCAGTTCCCAATTACCACTTCTCCATGCAAGCATaGGTCCTCTGGCAAATTCAC +
Preference number: 5 (lower is better)
Translates to: ASLGFSPELSRISVPNYHFSMQA*VLWQIH
Trigger: GTGAATTTGCCAGAGGACCAATGCTTGCATGGAGAA...GTGGTAATTGGGAACTGAAATCCTTGAGAGTTCCGGGGAGAAACCCAGAGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp AAGCTAAAGAATATCCCAGACTCACATGACCACAGGTCCCAGGTTAGGCACCTGTTCTCCATGCAAGCATaGGTCCTCTGGCAAATTCAC +
Preference number: 5 (lower is better)
Translates to: KLKNIPDSHDHRSQVRHLFSMQA*VLWQIH
Trigger: GTGAATTTGCCAGAGGACCAATGCTTGCATGGAGAA...CAGGTGCCTAACCTGGGACCTGTGGTCATGTGAGTCTGGGATATTCTTTAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp GCCCACAAATGTCCTCGTCCCATTCTCCATGCAAGCATTGGTCCTCTGGCAAATCATGGATCAAAGTCTTaGTTTACCTCCAGGGTTCCT +
Preference number: 5 (lower is better)
Translates to: AHKCPRPILHASIGPLANHGSKS*FTSRVP
Trigger: AGGAACCCTGGAGGTAAACAAAGACTTTGATCCATG...ATTTGCCAGAGGACCAATGCTTGCATGGAGAATGGGACGAGGACATTTGTGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp GCTCTGCTGTGGCTTTTTGAAGCCAGAGTGAAGAAAGACTGGGTTAGTACAGCACTTCCAGCCTGGAGTTaGTGGGTGGAAGAAAGAAGA +
Preference number: 5 (lower is better)
Translates to: ALLWLFEARVKKDWVSTALPAWS*WVEERR
Trigger: TCTTCTTTCTTCCACCCACAAACTCCAGGCTGGAAG...TGCTGTACTAACCCAGTCTTTCTTCACTCTGGCTTCAAAAAGCCACAGCAGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp AAGCTAAAGAATATCCCAGACTCACATGACCACAGGTCCCAGGTTAGGCACCTGAATCAGCTTTCTTCTTaGTGCTCACAGGGCCTAGAG +
Preference number: 5 (lower is better)
Translates to: KLKNIPDSHDHRSQVRHLNQLSS*CSQGLE
Trigger: CTCTAGGCCCTGTGAGCACAAAGAAGAAAGCTGATT...CAGGTGCCTAACCTGGGACCTGTGGTCATGTGAGTCTGGGATATTCTTTAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp AACAGGGACCTCGGGGTTGAAGAGTCATGCCATAAGTCAGTCAACATGGAACCACTTTTGCTTCTTTTATaGCGGCGAACACGCCTACTT +
Preference number: 5 (lower is better)
Translates to: NRDLGVEESCHKSVNMEPLLLLL*RRTRLL
Trigger: AAGTAGGCGTGTTCGCCGCAATAAAAGAAGCAAAAG...TGGTTCCATGTTGACTGACTTATGGCATGACTCTTCAACCCCGAGGTCCCTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp GCATCTCTGGGTTTCTCCCCGGAACTCTCAAGGATTTCAGTTCCCAATTACCACTGTAGCTTAAACACCTaGGGGTTCATAGTGATGCGA +
Preference number: 5 (lower is better)
Translates to: ASLGFSPELSRISVPNYHCSLNT*GFIVMR
Trigger: TCGCATCACTATGAACCCCAAGGTGTTTAAGCTACA...GTGGTAATTGGGAACTGAAATCCTTGAGAGTTCCGGGGAGAAACCCAGAGATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp CTGCTCCAACATTGTGCCAGGAAGATTCTTCTGAACACAAGAGCTCTAAGGCTGAAGAACGTGGTGTGCTaGCTCATGTTGATGGAGATG +
Preference number: 5 (lower is better)
Translates to: LLQHCARKILLNTRALRLKNVVC*LMLMEM
Trigger: CATCTCCATCAACATGAGCAAGCACACCACGTTCTT...CAGCCTTAGAGCTCTTGTGTTCAGAAGAATCTTCCTGGCACAATGTTGGAGCAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp GGGACTTCTGGAGGTCATCCCGTCCAACCCTTCGTCCCCAGACAGAATTTGATTAATGGAAAATTCTGTTaGTGCCCAGGTAAGCTAAAG +
Preference number: 5 (lower is better)
Translates to: GTSGGHPVQPFVPRQNLINGKFC*CPGKLK
Trigger: CTTTAGCTTACCTGGGCACAAACAGAATTTTCCATT...AATCAAATTCTGTCTGGGGACGAAGGGTTGGACGGGATGACCTCCAGAAGTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp GCTCTGCTGTGGCTTTTTGAAGCCAGAGTGAAGAAAGACTGGGTTAGTACAGCACTACCATATGATCTGTaGGGAAGCTTGGGGTTTAGG +
Preference number: 5 (lower is better)
Translates to: ALLWLFEARVKKDWVSTALPYDL*GSLGFR
Trigger: CCTAAACCCCAAGCTTCCCAACAGATCATATGGTAG...TGCTGTACTAACCCAGTCTTTCTTCACTCTGGCTTCAAAAAGCCACAGCAGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp GCCCACAAATGTCCTCGTCCCATTCTCCATGCAAGCATTGGTCCTCTGGCAAATATGAAGGAGTGGTTCTaGTTGGTTTCTGCTACAACT +
Preference number: 5 (lower is better)
Translates to: AHKCPRPILHASIGPLANMKEWF*LVSATT
Trigger: AGTTGTAGCAGAAACCAACAAGAACCACTCCTTCAT...ATTTGCCAGAGGACCAATGCTTGCATGGAGAATGGGACGAGGACATTTGTGGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp GGGTCCTACCATATGATCTGTTGGGAAGCTTGGGGTTTAGGGGAAGGTGAATTTGCTCCTTCATTGCTTTaGCTTCTTTTATTGCGGCGA +
Preference number: 5 (lower is better)
Translates to: GSYHMICWEAWGLGEGEFAPSLL*LLLLRR
Trigger: TCGCCGCAATAAAAGAAGCAAAAGCAATGAAGGAGC...AAATTCACCTTCCCCTAAACCCCAAGCTTCCCAACAGATCATATGGTAGGACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp CTGCTCCAACATTGTGCCAGGAAGATTCTTCTGAACACAAGAGCTCTAAGGCTGGCTCCTTCATTGCTTTaGCTTCTTTTATTGCGGCGA +
Preference number: 5 (lower is better)
Translates to: LLQHCARKILLNTRALRLAPSLL*LLLLRR
Trigger: TCGCCGCAATAAAAGAAGCAAAAGCAATGAAGGAGC...CAGCCTTAGAGCTCTTGTGTTCAGAAGAATCTTCCTGGCACAATGTTGGAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp AATCAGCTTTCTTCTTTGTGCTCACAGGGCCTAGAGGAGCCTCCAGGCAGGGATTTCTTTCCCTTTTTCTaGTTTTTAACTGGGCCATCT +
Preference number: 5 (lower is better)
Translates to: NQLSSLCSQGLEEPPGRDFFPFF*FLTGPS
Trigger: AGATGGCCCAGTTAAAAACAAGAAAAAGGGAAAGAA...ATCCCTGCCTGGAGGCTCCTCTAGGCCCTGTGAGCACAAAGAAGAAAGCTGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp GCCCACAAATGTCCTCGTCCCATTCTCCATGCAAGCATTGGTCCTCTGGCAAATAATGGAAAATTCTGTTaGTGCCCAGGTAAGCTAAAG +
Preference number: 5 (lower is better)
Translates to: AHKCPRPILHASIGPLANNGKFC*CPGKLK
Trigger: CTTTAGCTTACCTGGGCACAAACAGAATTTTCCATT...ATTTGCCAGAGGACCAATGCTTGCATGGAGAATGGGACGAGGACATTTGTGGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp TTTCAGGAACAAGAGGAGCAGACTGTACAAGGCTGGCCTTCCCAGGTTTGGGCTCAATTACCACTTTTATaGGTTCTCTCTAGACCTCAA +
Preference number: 5 (lower is better)
Translates to: FQEQEEQTVQGWPSQVWAQLPLL*VLSRPQ
Trigger: TTGAGGTCTAGAGAGAACCAATAAAAGTGGTAATTG...AGCCCAAACCTGGGAAGGCCAGCCTTGTACAGTCTGCTCCTCTTGTTCCTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp GAGACGACTCGTGTGCTTTTAACAGATCTTCAGAGTGAAGGTGCTGAGAGTGGAGGAAGACACAACTCATaGGTGTCCAAAGGAATATCC +
Preference number: 5 (lower is better)
Translates to: ETTRVLLTDLQSEGAESGGRHNS*VSKGIS
Trigger: GGATATTCCTTTGGACACCAATGAGTTGTGTCTTCC...TCCACTCTCAGCACCTTCACTCTGAAGATCTGTTAAAAGCACACGAGTCGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527388.5
CDS-3UTR CAA 90 bp AAGCTAAAGAATATCCCAGACTCACATGACCACAGGTCCCAGGTTAGGCACCTGAATGGAAAATTCTGTTaGTGCCCAGGTAAGCTAAAG +
Preference number: 5 (lower is better)
Translates to: KLKNIPDSHDHRSQVRHLNGKFC*CPGKLK
Trigger: CTTTAGCTTACCTGGGCACAAACAGAATTTTCCATT...CAGGTGCCTAACCTGGGACCTGTGGTCATGTGAGTCTGGGATATTCTTTAGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp TGGGTTTCTCCCCGGAACTCTCAAGGATTTCAGTTCCCAATTACCACTTTTATTAAGTACCCGCTGTTCTaGGTGAATTTCAGCTGCCTG +
Preference number: 5 (lower is better)
Translates to: WVSPRNSQGFQFPITTFIKYPLF*VNFSCL
Trigger: CAGGCAGCTGAAATTCACCAAGAACAGCGGGTACTT...AATAAAAGTGGTAATTGGGAACTGAAATCCTTGAGAGTTCCGGGGAGAAACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp TGGGTTTCTCCCCGGAACTCTCAAGGATTTCAGTTCCCAATTACCACTTTTATTCCTGCTGCTCCAACATaGTGCCAGGAAGATTCTTCT +
Preference number: 5 (lower is better)
Translates to: WVSPRNSQGFQFPITTFIPAAPT*CQEDSS
Trigger: AGAAGAATCTTCCTGGCACAATGTTGGAGCAGCAGG...AATAAAAGTGGTAATTGGGAACTGAAATCCTTGAGAGTTCCGGGGAGAAACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS CCA 90 bp CAGAGTGAAGGTGCTGAGAGTGGACAGAGGGAAGACACAACTCATTaGTGTCCAAAGGAATATCCATTAGAATATCAGTGGATTTCTCAG +
Preference number: 5 (lower is better)
Translates to: QSEGAESGQREDTTH*CPKEYPLEYQWISQ
Trigger: CTGAGAAATCCACTGATATTCTAATGGATATTCCTTTGGACACCAATGAGTTGTGTCTTCCCTCTGTCCACTCTCAGCACCTTCACTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527388.5
ENST00000530321.1
CDS-3UTR CAA 90 bp AAGCTAAAGAATATCCCAGACTCACATGACCACAGGTCCCAGGTTAGGCACCTGTTCTTTCCCTTTTTCTaGTTTTTAACTGGGCCATCT +
Preference number: 5 (lower is better)
Translates to: KLKNIPDSHDHRSQVRHLFFPFF*FLTGPS
Trigger: AGATGGCCCAGTTAAAAACAAGAAAAAGGGAAAGAA...CAGGTGCCTAACCTGGGACCTGTGGTCATGTGAGTCTGGGATATTCTTTAGCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp TGGGTTTCTCCCCGGAACTCTCAAGGATTTCAGTTCCCAATTACCACTTTTATTCTTTTGCTTCTTTTATaGCGGCGAACACGCCTACTT +
Preference number: 5 (lower is better)
Translates to: WVSPRNSQGFQFPITTFILLLLL*RRTRLL
Trigger: AAGTAGGCGTGTTCGCCGCAATAAAAGAAGCAAAAG...AATAAAAGTGGTAATTGGGAACTGAAATCCTTGAGAGTTCCGGGGAGAAACCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp CTGCTCCAACATTGTGCCAGGAAGATTCTTCTGAACACAAGAGCTCTAAGGCTGCAATTACCACTTTTATaGGTTCTCTCTAGACCTCAA +
Preference number: 5 (lower is better)
Translates to: LLQHCARKILLNTRALRLQLPLL*VLSRPQ
Trigger: TTGAGGTCTAGAGAGAACCAATAAAAGTGGTAATTG...CAGCCTTAGAGCTCTTGTGTTCAGAAGAATCTTCCTGGCACAATGTTGGAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp GAACTCTCAAGGATTTCAGTTCCCAATTACCACTTTTATTGGTTCTCTCTAGACTGGGTTGCAGCAAACTaGAACAAAATCCCTCTGTCC +
Preference number: 5 (lower is better)
Translates to: ELSRISVPNYHFYWFSLDWVAAN*NKIPLS
Trigger: GGACAGAGGGATTTTGTTCAAGTTTGCTGCAACCCA...GTCTAGAGAGAACCAATAAAAGTGGTAATTGGGAACTGAAATCCTTGAGAGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS-3UTR CAA 90 bp TCAAGGATTTCAGTTCCCAATTACCACTTTTATTGGTTCTCTCTAGACCTCAAATGGCCTAACGTCCACTaGGGTTGCAGCAAACTTGAA +
Preference number: 5 (lower is better)
Translates to: SRISVPNYHFYWFSLDLKWPNVH*GCSKLE
Trigger: TTCAAGTTTGCTGCAACCCAAGTGGACGTTAGGCCA...TTTGAGGTCTAGAGAGAACCAATAAAAGTGGTAATTGGGAACTGAAATCCTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS GCA 90 bp AATAATTCAGAAGTGATAAAGGATCAACTGAGTAGACTTACCATCTaGTCCTTCATTGCTTTTGCTTCTTTTATTGCGGCGAACACGCCT +
Preference number: 5 (lower is better)
Translates to: NNSEVIKDQLSRLTI*SFIAFASFIAANTP
Trigger: AGGCGTGTTCGCCGCAATAAAAGAAGCAAAAGCAATGAAGGAGCAGATGGTAAGTCTACTCAGTTGATCCTTTATCACTTCTGAATTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374548.5
ENST00000502251.5
ENST00000533317.5
CDS-3UTR CAA 90 bp GAACTCTCAAGGATTTCAGTTCCCAATTACCACTTTTATTGGTTCTCTCTAGACCAATTACCACTTTTATaGGTTCTCTCTAGACCTCAA +
Preference number: 5 (lower is better)
Translates to: ELSRISVPNYHFYWFSLDQLPLL*VLSRPQ
Trigger: TTGAGGTCTAGAGAGAACCAATAAAAGTGGTAATTG...GTCTAGAGAGAACCAATAAAAGTGGTAATTGGGAACTGAAATCCTTGAGAGTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000616899.1
CDS TCA 90 bp TCATTTTCTTCTTCTGTGAAGTACATCTTTTGGAAGTTTCCTTGGTaGGGATCTATAAGTCATAAACTCAGTTCTTTGCCTAAACACATC +
Preference number: 5 (lower is better)
Translates to: SFSSSVKYIFWKFPW*GSISHKLSSLPKHI
Trigger: GATGTGTTTAGGCAAAGAACTGAGTTTATGACTTATAGATCCTCACCAAGGAAACTTCCAAAAGATGTACTTCACAGAAGAAGAAAATGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533317.5
CDS GCA 72 bp CCCGCAGCCCTGGCTCCCTCGCTCCCGCGGCGCTGCTaGAGGCAGGAGTTCCCTGCGCTCCACCTCCGGGTA +
Preference number: 6 (lower is better)
Translates to: PAALAPSLPRRC*RQEFPALHLRV
Trigger: TACCCGGAGGTGGAGCGCAGGGAACTCCTGCCTGCAGCAGCGCCGCGGGAGCGAGGGAGCCAGGGCTGCGGG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000338901.4
ENST00000374548.5
ENST00000374552.9
ENST00000374553.6
ENST00000502251.5
ENST00000524573.5
ENST00000525810.5
ENST00000527388.5
ENST00000533317.5
CDS GCA 72 bp TCCTGCCATCGGCTGGGGGCTGCAGGGACCCGTTCCTaGGCGACAGTGGCTGGGCGGGACGGAGCAGGGAGC +
Preference number: 6 (lower is better)
Translates to: SCHRLGAAGTRS*ATVAGRDGAGS
Trigger: GCTCCCTGCTCCGTCCCGCCCAGCCACTGTCGCGCAGGAACGGGTCCCTGCAGCCCCCAGCCGATGGCAGGA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000338901.4
ENST00000374548.5
ENST00000374552.9
ENST00000374553.6
ENST00000502251.5
ENST00000524573.5
ENST00000525810.5
ENST00000527388.5
ENST00000533317.5
CDS GCA 72 bp CTCGCTCCCGCGGCGCTGCTGCAGGCAGGAGTTCCCTaGGCTCCACCTCCGGGTAGCCCATGGCCTCCGGAG +
Preference number: 6 (lower is better)
Translates to: LAPAALLQAGVP*APPPGSPWPPE
Trigger: CTCCGGAGGCCATGGGCTACCCGGAGGTGGAGCGCAGGGAACTCCTGCCTGCAGCAGCGCCGCGGGAGCGAG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000338901.4
ENST00000374548.5
ENST00000374552.9
ENST00000374553.6
ENST00000502251.5
ENST00000524573.5
ENST00000525810.5
ENST00000527388.5
ENST00000533317.5
CDS GCA 72 bp GGTCGAGGCCACCGAGGCTGCTTAGGGTGCCAGAGGTaGCAGGGGTGCCCGAGCCGCCAAGGCGGGACTCGG +
Preference number: 6 (lower is better)
Translates to: GRGHRGCLGCQR*QGCPSRQGGTR
Trigger: CCGAGTCCCGCCTTGGCGGCTCGGGCACCCCTGGCACCTCTGGCACCCTAAGCAGCCTCGGTGGCCTCGACC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000338901.4
ENST00000374548.5
ENST00000374552.9
ENST00000374553.6
ENST00000502251.5
ENST00000524573.5
ENST00000525810.5
ENST00000527388.5
ENST00000533317.5
CDS CCA 72 bp GGCTGGGGGCTGCAGGGACCCGTTCCTGCGCGACAGTaGCTGGGCGGGACGGAGCAGGGAGCAGCCGCATGT +
Preference number: 6 (lower is better)
Translates to: GWGLQGPVPARQ*LGGTEQGAAAC
Trigger: ACATGCGGCTGCTCCCTGCTCCGTCCCGCCCAGCCACTGTCGCGCAGGAACGGGTCCCTGCAGCCCCCAGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000338901.4
ENST00000374548.5
ENST00000374552.9
ENST00000374553.6
ENST00000502251.5
ENST00000524573.5
ENST00000525810.5
ENST00000527388.5
ENST00000533317.5
CDS GCA 72 bp GGCTGTCAGGGTCGAGGCCACCGAGGCTGCTTAGGGTaGCAGAGGTGCCAGGGGTGCCCGAGCCGCCAAGGC +
Preference number: 6 (lower is better)
Translates to: GCQGRGHRGCLG*QRCQGCPSRQG
Trigger: GCCTTGGCGGCTCGGGCACCCCTGGCACCTCTGGCACCCTAAGCAGCCTCGGTGGCCTCGACCCTGACAGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000338901.4
ENST00000374548.5
ENST00000374552.9
ENST00000374553.6
ENST00000502251.5
ENST00000524573.5
ENST00000525810.5
ENST00000527388.5
ENST00000533317.5
CDS CCA 72 bp ATTGGCTCGAGGTTGCTGAGTGCTCCCAGGCCCCTGTaGCGGAGGGCCCTCGCCCTACCCGCGAGGGGAGGG +
Preference number: 6 (lower is better)
Translates to: IGSRLLSAPRPL*RRALALPARGG
Trigger: CCCTCCCCTCGCGGGTAGGGCGAGGGCCCTCCGCCACAGGGGCCTGGGAGCACTCAGCAACCTCGAGCCAAT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338901.4
CDS GCA 72 bp CACCGAGGCTGCTTAGGGTGCCAGAGGTGCCAGGGGTaGCCGAGCCGCCAAGGCGGGACTCGGCTCCACGTT +
Preference number: 6 (lower is better)
Translates to: HRGCLGCQRCQG*PSRQGGTRLHV
Trigger: AACGTGGAGCCGAGTCCCGCCTTGGCGGCTCGGGCACCCCTGGCACCTCTGGCACCCTAAGCAGCCTCGGTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000338901.4
ENST00000374548.5
ENST00000374552.9
ENST00000374553.6
ENST00000502251.5
ENST00000524573.5
ENST00000525810.5
ENST00000527388.5
ENST00000533317.5
CDS CAA 72 bp CCGGGTAGCCCATGGCCTCCGGAGACACCCACTCTCTaGAGGCCCGGGAGCCGCTGCGTCTGCCTCAGCCGT +
Preference number: 6 (lower is better)
Translates to: PGSPWPPETPTL*RPGSRCVCLSR
Trigger: ACGGCTGAGGCAGACGCAGCGGCTCCCGGGCCTCAAGAGAGTGGGTGTCTCCGGAGGCCATGGGCTACCCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000338901.4
ENST00000374548.5
ENST00000374552.9
ENST00000374553.6
ENST00000502251.5
ENST00000524573.5
ENST00000525810.5
ENST00000527388.5
ENST00000533317.5
CDS CAA 90 bp GCTCCACCTCCGGGTAGCCCATGGCCTCCGGAGACACCCACTCTCTaGAGGCCCGGGAGCCGCTGCGTCTGCCTCAGCCGTTCACGACCT +
Preference number: 6 (lower is better)
Translates to: APPPGSPWPPETPTL*RPGSRCVCLSRSRP
Trigger: AGGTCGTGAACGGCTGAGGCAGACGCAGCGGCTCCCGGGCCTCAAGAGAGTGGGTGTCTCCGGAGGCCATGGGCTACCCGGAGGTGGAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000338901.4
ENST00000374548.5
ENST00000374552.9
ENST00000374553.6
ENST00000502251.5
ENST00000524573.5
ENST00000525810.5
ENST00000527388.5
ENST00000533317.5
CDS TCA 72 bp GGAGCCGCTGCGTCTGCCTCAGCCGTTCACGACCTCTaGCAGGCGGCTACTGTCCTGCCATCGGCTGGGGGC +
Preference number: 6 (lower is better)
Translates to: GAAASASAVHDL*QAATVLPSAGG
Trigger: GCCCCCAGCCGATGGCAGGACAGTAGCCGCCTGTCAGAGGTCGTGAACGGCTGAGGCAGACGCAGCGGCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000338901.4
ENST00000374548.5
ENST00000374552.9
ENST00000374553.6
ENST00000502251.5
ENST00000524573.5
ENST00000525810.5
ENST00000527388.5
ENST00000533317.5
CDS TCA 72 bp CGGGTAGCCCATGGCCTCCGGAGACACCCACTCTCTTaGGGCCCGGGAGCCGCTGCGTCTGCCTCAGCCGTT +
Preference number: 6 (lower is better)
Translates to: RVAHGLRRHPLS*GPGAAASASAV
Trigger: AACGGCTGAGGCAGACGCAGCGGCTCCCGGGCCTCAAGAGAGTGGGTGTCTCCGGAGGCCATGGGCTACCCG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000338901.4
ENST00000374548.5
ENST00000374552.9
ENST00000374553.6
ENST00000502251.5
ENST00000524573.5
ENST00000525810.5
ENST00000527388.5
ENST00000533317.5
CDS GCA 72 bp GTGGCTGGGCGGGACGGAGCAGGGAGCAGCCGCATGTaGAGCTCTACTCCGAGGGGTGGGAAAGGGAGGAGG +
Preference number: 6 (lower is better)
Translates to: VAGRDGAGSSRM*SSTPRGGKGRR
Trigger: CCTCCTCCCTTTCCCACCCCTCGGAGTAGAGCTGCACATGCGGCTGCTCCCTGCTCCGTCCCGCCCAGCCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000338901.4
ENST00000374548.5
ENST00000374553.6
ENST00000502251.5
ENST00000525810.5
ENST00000527388.5
ENST00000533317.5
CDS CCA 72 bp CGACCTCTGACAGGCGGCTACTGTCCTGCCATCGGCTaGGGGCTGCAGGGACCCGTTCCTGCGCGACAGTGG +
Preference number: 6 (lower is better)
Translates to: RPLTGGYCPAIG*GLQGPVPARQW
Trigger: CCACTGTCGCGCAGGAACGGGTCCCTGCAGCCCCCAGCCGATGGCAGGACAGTAGCCGCCTGTCAGAGGTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000338901.4
ENST00000374548.5
ENST00000374552.9
ENST00000374553.6
ENST00000502251.5
ENST00000524573.5
ENST00000525810.5
ENST00000527388.5
ENST00000533317.5
CDS CCA 72 bp GCAGGAGTTCCCTGCGCTCCACCTCCGGGTAGCCCATaGCCTCCGGAGACACCCACTCTCTTGAGGCCCGGG +
Preference number: 6 (lower is better)
Translates to: AGVPCAPPPGSP*PPETPTLLRPG
Trigger: CCCGGGCCTCAAGAGAGTGGGTGTCTCCGGAGGCCATGGGCTACCCGGAGGTGGAGCGCAGGGAACTCCTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000338901.4
ENST00000374548.5
ENST00000374552.9
ENST00000374553.6
ENST00000502251.5
ENST00000524573.5
ENST00000525810.5
ENST00000527388.5
ENST00000533317.5
CDS GCA 72 bp CAGCCGTTCACGACCTCTGACAGGCGGCTACTGTCCTaGCATCGGCTGGGGGCTGCAGGGACCCGTTCCTGC +
Preference number: 6 (lower is better)
Translates to: QPFTTSDRRLLS*HRLGAAGTRSC
Trigger: GCAGGAACGGGTCCCTGCAGCCCCCAGCCGATGGCAGGACAGTAGCCGCCTGTCAGAGGTCGTGAACGGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000338901.4
ENST00000374548.5
ENST00000374552.9
ENST00000374553.6
ENST00000502251.5
ENST00000524573.5
ENST00000525810.5
ENST00000527388.5
ENST00000533317.5
CDS GCA 72 bp CCGGAGACACCCACTCTCTTGAGGCCCGGGAGCCGCTaGGTCTGCCTCAGCCGTTCACGACCTCTGACAGGC +
Preference number: 6 (lower is better)
Translates to: PETPTLLRPGSR*VCLSRSRPLTG
Trigger: GCCTGTCAGAGGTCGTGAACGGCTGAGGCAGACGCAGCGGCTCCCGGGCCTCAAGAGAGTGGGTGTCTCCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000338901.4
ENST00000374548.5
ENST00000374552.9
ENST00000374553.6
ENST00000502251.5
ENST00000524573.5
ENST00000525810.5
ENST00000527388.5
ENST00000533317.5
CDS GCA 72 bp ACACCCACTCTCTTGAGGCCCGGGAGCCGCTGCGTCTaGCTCAGCCGTTCACGACCTCTGACAGGCGGCTAC +
Preference number: 6 (lower is better)
Translates to: TPTLLRPGSRCV*LSRSRPLTGGY
Trigger: GTAGCCGCCTGTCAGAGGTCGTGAACGGCTGAGGCAGACGCAGCGGCTCCCGGGCCTCAAGAGAGTGGGTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000338901.4
ENST00000374548.5
ENST00000374552.9
ENST00000374553.6
ENST00000502251.5
ENST00000524573.5
ENST00000525810.5
ENST00000527388.5
ENST00000533317.5
CDS TCA 72 bp TCCAATGGCTGCTGCTTAGGTGACGGCTGCCCAAGGTaGCTGGTGATGGGGCTGTCAGGGTCGAGGCCACCG +
Preference number: 6 (lower is better)
Translates to: SNGCCLGDGCPR*LVMGLSGSRPP
Trigger: CGGTGGCCTCGACCCTGACAGCCCCATCACCAGTCACCTTGGGCAGCCGTCACCTAAGCAGCAGCCATTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000338901.4
ENST00000374548.5
ENST00000374552.9
ENST00000374553.6
ENST00000502251.5
ENST00000524573.5
ENST00000525810.5
ENST00000527388.5
ENST00000533317.5
CDS GCA 72 bp GGCCATCTGGTGCCCGTCCTGGGAGTCAGAGTGGAGTaGGGCTTCTCCCGGTTCCAATGGCTGCTGCTTAGG +
Preference number: 6 (lower is better)
Translates to: GHLVPVLGVRVE*GFSRFQWLLLR
Trigger: CCTAAGCAGCAGCCATTGGAACCGGGAGAAGCCGCACTCCACTCTGACTCCCAGGACGGGCACCAGATGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374548.5
ENST00000374552.9
ENST00000374553.6
ENST00000524573.5
CDS GCA 72 bp ACAGGCCTGGTGCCCGTCCTGGGAGTCAGAGTGGAGTaGGGCTTCTCCCGGTTCCAATGGCTGCTGCTTAGG +
Preference number: 6 (lower is better)
Translates to: TGLVPVLGVRVE*GFSRFQWLLLR
Trigger: CCTAAGCAGCAGCCATTGGAACCGGGAGAAGCCGCACTCCACTCTGACTCCCAGGACGGGCACCAGGCCTGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502251.5
CDS GCA 72 bp GTGTCCCTGGTGCCCGTCCTGGGAGTCAGAGTGGAGTaGGGCTTCTCCCGGTTCCAATGGCTGCTGCTTAGG +
Preference number: 6 (lower is better)
Translates to: VSLVPVLGVRVE*GFSRFQWLLLR
Trigger: CCTAAGCAGCAGCCATTGGAACCGGGAGAAGCCGCACTCCACTCTGACTCCCAGGACGGGCACCAGGGACAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525810.5
CDS TCA 72 bp TGCGGCTTCTCCCGGTTCCAATGGCTGCTGCTTAGGTaGCGGCTGCCCAAGGTGACTGGTGATGGGGCTGTC +
Preference number: 6 (lower is better)
Translates to: CGFSRFQWLLLR*RLPKVTGDGAV
Trigger: GACAGCCCCATCACCAGTCACCTTGGGCAGCCGTCACCTAAGCAGCAGCCATTGGAACCGGGAGAAGCCGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000338901.4
ENST00000374548.5
ENST00000374552.9
ENST00000374553.6
ENST00000502251.5
ENST00000524573.5
ENST00000525810.5
ENST00000527388.5
ENST00000533317.5
CDS GCA 72 bp ACTCACCTGGTGCCCGTCCTGGGAGTCAGAGTGGAGTaGGGCTTCTCCCGGTTCCAATGGCTGCTGCTTAGG +
Preference number: 6 (lower is better)
Translates to: THLVPVLGVRVE*GFSRFQWLLLR
Trigger: CCTAAGCAGCAGCCATTGGAACCGGGAGAAGCCGCACTCCACTCTGACTCCCAGGACGGGCACCAGGTGAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338901.4
CDS CCA 72 bp GAAGACACAACTCATTGGTGTCCCTGGTGCCCGTCCTaGGAGTCAGAGTGGAGTGCGGCTTCTCCCGGTTCC +
Preference number: 6 (lower is better)
Translates to: EDTTHWCPWCPS*ESEWSAASPGS
Trigger: GGAACCGGGAGAAGCCGCACTCCACTCTGACTCCCAGGACGGGCACCAGGGACACCAATGAGTTGTGTCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525810.5
CDS GCA 72 bp GGCGATCTTCTGCCGGGCCTTGAGGAGGCAGACGCCTaGGGTATAGCAAGTGTTGTAGTTGGTCTTGCCCGT +
Preference number: 6 (lower is better)
Translates to: GDLLPGLEEADA*GIASVVVGLAR
Trigger: ACGGGCAAGACCAACTACAACACTTGCTATACCGCAGGCGTCTGCCTCCTCAAGGCCCGGCAGAAGATCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000524573.5
ENST00000616899.1
CDS GCA 72 bp GGACAGAGGGAAGACACAACTCATTGGTGTCCCTGGTaGCCGTCCTGGGAGTCAGAGTGGAGTGCGGCTTCT +
Preference number: 6 (lower is better)
Translates to: GQREDTTHWCPW*PSWESEWSAAS
Trigger: AGAAGCCGCACTCCACTCTGACTCCCAGGACGGGCACCAGGGACACCAATGAGTTGTGTCTTCCCTCTGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525810.5
CDS CCA 72 bp AGTGGACAGAGGGAAGACACAACTCATTGGTGTCCCTaGTGCCCGTCCTGGGAGTCAGAGTGGAGTGCGGCT +
Preference number: 6 (lower is better)
Translates to: SGQREDTTHWCP*CPSWESEWSAA
Trigger: AGCCGCACTCCACTCTGACTCCCAGGACGGGCACCAGGGACACCAATGAGTTGTGTCTTCCCTCTGTCCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525810.5
CDS CCA 72 bp GGTGCTGAGAGTGGACAGAGGGAAGACACAACTCATTaGTGTCCCTGGTGCCCGTCCTGGGAGTCAGAGTGG +
Preference number: 6 (lower is better)
Translates to: GAESGQREDTTH*CPWCPSWESEW
Trigger: CCACTCTGACTCCCAGGACGGGCACCAGGGACACCAATGAGTTGTGTCTTCCCTCTGTCCACTCTCAGCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000525810.5
CDS CAA 90 bp GCAGGGGCTTCACCCAGCCTGATGGCCCCAAAGAACGTGGTGTGCTaGCTCATGTTGATGGAGATGTCAGCGTGCACCATCTTGACGGCG +
Preference number: 6 (lower is better)
Translates to: AGASPSLMAPKNVVC*LMLMEMSACTILTA
Trigger: CGCCGTCAAGATGGTGCACGCTGACATCTCCATCAACATGAGCAAGCACACCACGTTCTTTGGGGCCATCAGGCTGGGTGAAGCCCCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000524573.5
ENST00000616899.1
CDS CCA 72 bp GGAGGCAGACGCCTGCGGTATAGCAAGTGTTGTAGTTaGTCTTGCCCGTCTCGATGCTGCGTGTGCACTGCA +
Preference number: 6 (lower is better)
Translates to: GGRRLRYSKCCS*SCPSRCCVCTA
Trigger: TGCAGTGCACACGCAGCATCGAGACGGGCAAGACCAACTACAACACTTGCTATACCGCAGGCGTCTGCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000524573.5
ENST00000616899.1
CDS CCA 72 bp CTCAGTGAAAAAGAAACATGGAGCTGGTGCCCGTCCTaGGAGTCAGAGTGGAGTGCGGCTTCTCCCGGTTCC +
Preference number: 6 (lower is better)
Translates to: LSEKETWSWCPS*ESEWSAASPGS
Trigger: GGAACCGGGAGAAGCCGCACTCCACTCTGACTCCCAGGACGGGCACCAGCTCCATGTTTCTTTTTCACTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533317.5
CDS GCA 72 bp AGACGCCTGCGGTATAGCAAGTGTTGTAGTTGGTCTTaGCCGTCTCGATGCTGCGTGTGCACTGCAGGAAGG +
Preference number: 6 (lower is better)
Translates to: RRLRYSKCCSWS*PSRCCVCTAGR
Trigger: CCTTCCTGCAGTGCACACGCAGCATCGAGACGGGCAAGACCAACTACAACACTTGCTATACCGCAGGCGTCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000524573.5
ENST00000616899.1
CDS GCA 72 bp GCTTCACCCAGCCTGATGGCCCCAAAGAACGTGGTGTaGTTGCTCATGTTGATGGAGATGTCAGCGTGCACC +
Preference number: 6 (lower is better)
Translates to: ASPSLMAPKNVV*LLMLMEMSACT
Trigger: GGTGCACGCTGACATCTCCATCAACATGAGCAAGCACACCACGTTCTTTGGGGCCATCAGGCTGGGTGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000524573.5
ENST00000616899.1
CDS CAA 72 bp TTGCTCATGTTGATGGAGATGTCAGCGTGCACCATCTaGACGGCGATCTTCTGCCGGGCCTTGAGGAGGCAG +
Preference number: 6 (lower is better)
Translates to: LLMLMEMSACTI*TAIFCRALRRQ
Trigger: CTGCCTCCTCAAGGCCCGGCAGAAGATCGCCGTCAAGATGGTGCACGCTGACATCTCCATCAACATGAGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000524573.5
ENST00000616899.1
CDS CAA 90 bp TCACCCAGCCTGATGGCCCCAAAGAACGTGGTGTGCTTGCTCATGTaGATGGAGATGTCAGCGTGCACCATCTTGACGGCGATCTTCTGC +
Preference number: 6 (lower is better)
Translates to: SPSLMAPKNVVCLLM*MEMSACTILTAIFC
Trigger: GCAGAAGATCGCCGTCAAGATGGTGCACGCTGACATCTCCATCAACATGAGCAAGCACACCACGTTCTTTGGGGCCATCAGGCTGGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000524573.5
ENST00000616899.1
CDS GCA 72 bp AGCAAGTGTTGTAGTTGGTCTTGCCCGTCTCGATGCTaGGTGTGCACTGCAGGAAGGGCTTCTCATCCACCA +
Preference number: 6 (lower is better)
Translates to: SKCCSWSCPSRC*VCTAGRASHPP
Trigger: TGGTGGATGAGAAGCCCTTCCTGCAGTGCACACGCAGCATCGAGACGGGCAAGACCAACTACAACACTTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000524573.5
ENST00000616899.1
CDS CAA 72 bp CTGATGGCCCCAAAGAACGTGGTGTGCTTGCTCATGTaGATGGAGATGTCAGCGTGCACCATCTTGACGGCG +
Preference number: 6 (lower is better)
Translates to: LMAPKNVVCLLM*MEMSACTILTA
Trigger: CGCCGTCAAGATGGTGCACGCTGACATCTCCATCAACATGAGCAAGCACACCACGTTCTTTGGGGCCATCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000524573.5
ENST00000616899.1
CDS CAA 72 bp TCACCCAGCCTGATGGCCCCAAAGAACGTGGTGTGCTaGCTCATGTTGATGGAGATGTCAGCGTGCACCATC +
Preference number: 6 (lower is better)
Translates to: SPSLMAPKNVVC*LMLMEMSACTI
Trigger: GATGGTGCACGCTGACATCTCCATCAACATGAGCAAGCACACCACGTTCTTTGGGGCCATCAGGCTGGGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000524573.5
ENST00000616899.1
CDS GCA 72 bp TATAGCAAGTGTTGTAGTTGGTCTTGCCCGTCTCGATaGTGCGTGTGCACTGCAGGAAGGGCTTCTCATCCA +
Preference number: 6 (lower is better)
Translates to: YSKCCSWSCPSR*CVCTAGRASHP
Trigger: TGGATGAGAAGCCCTTCCTGCAGTGCACACGCAGCATCGAGACGGGCAAGACCAACTACAACACTTGCTATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000374552.9
ENST00000374553.6
ENST00000524573.5
ENST00000616899.1
CDS CCA 72 bp GGTGCTGAGAGTGGACAGAGGGAAGACACAACTCATTaGTGTCCCTCTTCCCCAGTTTTGTCCTCTTCTTTC +
Preference number: 6 (lower is better)
Translates to: GAESGQREDTTH*CPSSPVLSSSF
Trigger: GAAAGAAGAGGACAAAACTGGGGAAGAGGGACACCAATGAGTTGTGTCTTCCCTCTGTCCACTCTCAGCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510681.2
CDS TCA 72 bp GGCAATACTTTCTTTAAAATGATACCTAAGCATAGCTaGCAGGTCACAGGCTTAGCAAGACCTGAGGAAAAC +
Preference number: 6 (lower is better)
Translates to: GNTFFKMIPKHS*QVTGLARPEEN
Trigger: GTTTTCCTCAGGTCTTGCTAAGCCTGTGACCTGTCAGCTATGCTTAGGTATCATTTTAAAGAAAGTATTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510681.2
CDS CAA 72 bp TTACCATCTGCTCCTTCATTGCTTTTGCTTCTTTTATaGCGGCGAACACGCCTACTTTCTTCTTCAGAGTAT +
Preference number: 6 (lower is better)
Translates to: LPSAPSLLLLLL*RRTRLLSSSEY
Trigger: ATACTCTGAAGAAGAAAGTAGGCGTGTTCGCCGCAATAAAAGAAGCAAAAGCAATGAAGGAGCAGATGGTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374548.5
ENST00000502251.5
ENST00000533317.5
CDS TCA 72 bp TCTTCTGTGAAGTACATCTTTTGGAAGTTTCCTTGGTaGGGATCTATAAGTCATAAACTCAGTTCTTTGCCT +
Preference number: 6 (lower is better)
Translates to: SSVKYIFWKFPW*GSISHKLSSLP
Trigger: AGGCAAAGAACTGAGTTTATGACTTATAGATCCTCACCAAGGAAACTTCCAAAAGATGTACTTCACAGAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533317.5