RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ECT2L (Homo sapiens)

Ensembl gene IDs: ENSG00000203734

Ensembl transcript IDs: ENST00000367682.6, ENST00000401414.4, ENST00000495970.1, ENST00000541398.7

Found 163 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR CCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGGTTGTCTGTCTTTGCTaGGGAGAATTGGCACCCCTG +
Preference number: 2 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVVVCLC*GELAPL
Trigger: CAGGGGTGCCAATTCTCCCCAGCAAAGACAGACAAC...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
3UTR-3UTR TCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGGTTTCTCCATGTTGGTaGGGCTGGTCTCAAACTCCT +
Preference number: 2 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVVSPCW*GWSQTP
Trigger: AGGAGTTTGAGACCAGCCTCACCAACATGGAGAAAC...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
3UTR-3UTR GCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGCATGTTGTCTGTCTTTaGTGGGGAGAATTGGCACCC +
Preference number: 2 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVHVVCL*WGELAP
Trigger: GGGTGCCAATTCTCCCCAGCAAAGACAGACAACATG...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
3UTR-3UTR GCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGTTTACACAATGTGCTTaGTCTGTCTTAGGTTTCATC +
Preference number: 2 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVFTQCA*SVLGFI
Trigger: GATGAAACCTAAGACAGAGCAAGCACATTGTGTAAA...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
3UTR-3UTR GCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGAAGCTTTACACAATGTaGTTGCTCTGTCTTAGGTTT +
Preference number: 2 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVKLYTM*LLCLRF
Trigger: AAACCTAAGACAGAGCAAGCACATTGTGTAAAGCTT...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
3UTR-3UTR CAA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGACATGTTGTCTGTCTTaGCTGGGGAGAATTGGCACC +
Preference number: 3 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVTCCLS*LGRIGT
Trigger: GGTGCCAATTCTCCCCAGCAAAGACAGACAACATGT...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
3UTR-3UTR CAA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGCTTTACACAATGTGCTaGCTCTGTCTTAGGTTTCAT +
Preference number: 3 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVLYTMC*LCLRFH
Trigger: ATGAAACCTAAGACAGAGCAAGCACATTGTGTAAAG...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR TCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGACTTCCAGGGCCAGCTaGCTTGGGCAGCGGCACACA +
Preference number: 4 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVTSRAS*LGQRHT
Trigger: TGTGTGCCGCTGCCCAAGTCAGCTGGCCCTGGAAGT...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR TCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGTCTAGGAAGTGGCTATaGGGCCCGGTACAGTGGCGG +
Preference number: 4 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVSRKWL*GPVQWR
Trigger: CCGCCACTGTACCGGGCCTCATAGCCACTTCCTAGA...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR GCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGGCAGTGAAAATCGAGTaGGCCAACTCGGGCCGCAGC +
Preference number: 4 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVAVKIE*ANSGRS
Trigger: GCTGCGGCCCGAGTTGGCGCACTCGATTTTCACTGC...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541398.7
CDS-3UTR TCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGATTTCTCCCACACAGTaGGCTGGGCCCCATTCCTGC +
Preference number: 4 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVISPTQ*AGPHSC
Trigger: GCAGGAATGGGGCCCAGCTCACTGTGTGGGAGAAAT...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR GCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGCTGGTAAGAGCCAGTTaGAATCCCAGTGGGGGCCGT +
Preference number: 4 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVLVRAS*NPSGGR
Trigger: ACGGCCCCCACTGGGATTGCAACTGGCTCTTACCAG...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR CCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGCAGGGCCAGCTGACTTaGGCAGCGGCACACAAATCT +
Preference number: 4 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVQGQLT*AAAHKS
Trigger: AGATTTGTGTGCCGCTGCCCAAGTCAGCTGGCCCTG...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR CCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGTGGGAGAGGCGTGGTTaGCATCTGGGCTTTAGCACG +
Preference number: 4 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVWERRG*HLGFST
Trigger: CGTGCTAAAGCCCAGATGCCAACCACGCCTCTCCCA...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR CCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGCGCTCCCTTACAGTCTaGGAGAGGCGTGGTTGGCAT +
Preference number: 4 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVRSLTV*ERRGWH
Trigger: ATGCCAACCACGCCTCTCCCAGACTGTAAGGGAGCG...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR CCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGTCCCACACAGTGAGCTaGGCCCCATTCCTGCAGTCT +
Preference number: 4 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVSHTVS*APFLQS
Trigger: AGACTGCAGGAATGGGGCCCAGCTCACTGTGTGGGA...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR TCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGCTTGGAACCGCGCAGTaGAAATCGAGTGCGCCAACT +
Preference number: 4 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVLGTAQ*KSSAPT
Trigger: AGTTGGCGCACTCGATTTTCACTGCGCGGTTCCAAG...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR GCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGGCTGGGCCCCATTCCTaGAGTCTGTCTCTCAGGTTA +
Preference number: 4 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVAGPHS*SLSLRL
Trigger: TAACCTGAGAGACAGACTGCAGGAATGGGGCCCAGC...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR CCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGGCGGCTGTCTCCTCTTaGAACCGCGCAGTGAAAATC +
Preference number: 4 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVAAVSS*NRAVKI
Trigger: GATTTTCACTGCGCGGTTCCAAGAGGAGACAGCCGC...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR CCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGGGGGCCTTTCCCCATTaGGATCCCAGCCAATCACTA +
Preference number: 4 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVGAFPH*DPSQSL
Trigger: TAGTGATTGGCTGGGATCCCAATGGGGAAAGGCCCC...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR TCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGACGAAGAAGTCCACGTaGCCCCCTTCTTCTTCAGTG +
Preference number: 4 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVTKKST*PPSSSV
Trigger: CACTGAAGAAGAAGGGGGTCACGTGGACTTCTTCGT...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR TCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGTTCAATTCCTGCCTCTaGTGCTCCAAGGGGCACGAA +
Preference number: 4 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVFNSCL*CSKGHE
Trigger: TTCGTGCCCCTTGGAGCATCAGAGGCAGGAATTGAA...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR TCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGCCGATGAAGGGCCACTaGTGCAATGAACTGGTAGGT +
Preference number: 4 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVPMKGH*CNELVG
Trigger: ACCTACCAGTTCATTGCATCAGTGGCCCTTCATCGG...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR GCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGTATTCCGATGCTCTGTaGCTTCTGCCCATCCAGAGC +
Preference number: 4 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVYSDAL*LLPIQS
Trigger: GCTCTGGATGGGCAGAAGGCACAGAGCATCGGAATA...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR GCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGACGGTCAACATGCTCTaGAGGGGTATGAAGCCTGAC +
Preference number: 4 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVTVNML*RGMKPD
Trigger: GTCAGGCTTCATACCCCTGCAGAGCATGTTGACCGT...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR GCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGTCACCCAGGCTGAAGTaGAATGGAGCCATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVSPRLK*NGAISA
Trigger: AGCTGAGATGGCTCCATTGCACTTCAGCCTGGGTGA...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR CCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGATTCGCAGAAGTAGATaGAAGAGGGGGCCTTTCCCC +
Preference number: 4 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVIRRSR*KRGPFP
Trigger: GGGGAAAGGCCCCCTCTTCCATCTACTTCTGCGAAT...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR CCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGGTACAGCAGCAGCTCTaGCAGGCTCAGCATTTTGGT +
Preference number: 4 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVVQQQL*QAQHFG
Trigger: ACCAAAATGCTGAGCCTGCCAGAGCTGCTGCTGTAC...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR TCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGCTTCTAGGAAGTCTGTaGAGCTGGACCACGTCTGTA +
Preference number: 4 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVLLGSL*SWTTSV
Trigger: TACAGACGTGGTCCAGCTTCACAGACTTCCTAGAAG...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR TCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGCTATCATCCTGCCACTaGTGCTCTTCTGCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVLSSCH*CSSAVP
Trigger: AGGAACTGCAGAAGAGCATCAGTGGCAGGATGATAG...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR TCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGCTCTCAAATGGAGTGTaGGATGTGCCCCGACTAGAA +
Preference number: 4 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVLSNGV*DVPRLE
Trigger: TTCTAGTCGGGGCACATCTCACACTCCATTTGAGAG...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR GCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGCTCCATCAATCCATCTaGCAGAGCTTGCGCAGTATC +
Preference number: 4 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVLHQSI*QSLRSI
Trigger: GATACTGCGCAAGCTCTGGCAGATGGATTGATGGAG...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR TCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGGGAAGAATCCCCAGCTaGCGTCTCAGCAAATTTTCT +
Preference number: 4 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVGRIPS*RLSKFS
Trigger: AGAAAATTTGCTGAGACGTCAGCTGGGGATTCTTCC...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR TCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGGGGATGATATTAACATaGAGTGTGGCCGGAGAGCAT +
Preference number: 4 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVGMILT*SVAGEH
Trigger: ATGCTCTCCGGCCACACTTCATGTTAATATCATCCC...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR TCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGAACGTGCCAGTTAGTTaGGACAGCTGGGAAAGAACT +
Preference number: 4 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVNVPVS*DSWERT
Trigger: AGTTCTTTCCCAGCTGTCTCAACTAACTGGCACGTT...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR TCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGAGCTCGCTTTTCTGCTaGGTCCTTCTGGAGTATTCT +
Preference number: 4 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVSSLFC*VLLEYS
Trigger: AGAATACTCCAGAAGGACTCAGCAGAAAAGCGAGCT...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR TCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGGGGCCACTGATGCAATaGACTGGTAGGTTGTTTTTG +
Preference number: 4 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVGPLMQ*TGRLFL
Trigger: CAAAAACAACCTACCAGTTCATTGCATCAGTGGCCC...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR TCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGTCTATGAGTAACCGATaGAGGGCCACTGATGCAATG +
Preference number: 4 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVSMSNR*RATDAM
Trigger: CATTGCATCAGTGGCCCTTCATCGGTTACTCATAGA...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR TCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGGAGAATTGGCACCCCTaGAGTTTTCAAGTTCGGTCT +
Preference number: 4 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVENWHP*SFQVRS
Trigger: AGACCGAACTTGAAAACTTCAGGGGTGCCAATTCTC...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR GCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGATGCTCTGTGCCTTCTaGCCATCCAGAGCTTTTTCT +
Preference number: 4 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVMLCAF*PSRAFS
Trigger: AGAAAAAGCTCTGGATGGGCAGAAGGCACAGAGCAT...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR GCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGCCATCTGCCAGAGCTTaGGCAGTATCTTGGTTGTTT +
Preference number: 4 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVPSARA*AVSWLF
Trigger: AAACAACCAAGATACTGCGCAAGCTCTGGCAGATGG...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR CCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGTTTGGTCAATTGCAGTaGTCAAGTCCCCACGGTCAA +
Preference number: 4 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVFGQLQ*SSPHGQ
Trigger: TTGACCGTGGGGACTTGACCACTGCAATTGACCAAA...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR CCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGCAGGCTGAAGTGCAATaGAGCCATCTCAGCTTACTA +
Preference number: 4 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVQAEVQ*SHLSLL
Trigger: TAGTAAGCTGAGATGGCTCCATTGCACTTCAGCCTG...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR TCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGTCTTCTGCAGTTCCTTaGAGAAAGGATACAGCTGCT +
Preference number: 4 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVSSAVP*RKDTAA
Trigger: AGCAGCTGTATCCTTTCTTCAAGGAACTGCAGAAGA...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR GCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGGGCTTCCAGAAATATTaGTTCGCTTGGGCAAGGTTT +
Preference number: 4 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVGFQKY*FAWARF
Trigger: AAACCTTGCCCAAGCGAAGCAATATTTCTGGAAGCC...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR GCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGCCACTGATGCTCTTCTaGAGTTCCTTGAAGAAAGGA +
Preference number: 4 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVPLMLF*SSLKKG
Trigger: TCCTTTCTTCAAGGAACTGCAGAAGAGCATCAGTGG...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR GCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGGTGTCAAACATAAACTaGCCTATCATCCTGCCACTG +
Preference number: 4 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVVSNIN*PIILPL
Trigger: CAGTGGCAGGATGATAGGGCAGTTTATGTTTGACAC...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR GCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGTGCTGCTTTCAGTGGTaGGACATAAACATCTCTCAC +
Preference number: 4 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVCCFQW*DINISH
Trigger: GTGAGAGATGTTTATGTCGCACCACTGAAAGCAGCA...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR GCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGTTTGATTTGGTCAATTaGAGTGGTCAAGTCCCCACG +
Preference number: 4 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVFDLVN*SGQVPT
Trigger: CGTGGGGACTTGACCACTGCAATTGACCAAATCAAA...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR GCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGGAACGTTCCAGGAAATaGTACTTAGAAACTGCCGTG +
Preference number: 4 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVERSRK*YLETAV
Trigger: CACGGCAGTTTCTAAGTAGCATTTCCTGGAACGTTC...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541398.7
CDS-3UTR CCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGGAAGCTCTCCATTTCTaGAGTTCTCCAGGAAGAATC +
Preference number: 4 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVEALHF*SSPGRI
Trigger: GATTCTTCCTGGAGAACTCCAGAAATGGAGAGCTTC...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR CCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGGCACTAAATCTGGTGTaGAAGCTCTCCATTTCTGGA +
Preference number: 4 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVALNLV*KLSISG
Trigger: TCCAGAAATGGAGAGCTTCCACACCAGATTTAGTGC...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR CCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGCCTCATCTTCTGTTTTaGGTTCATTCAGCGTCCCAT +
Preference number: 4 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVPHLLF*VHSASH
Trigger: ATGGGACGCTGAATGAACCCAAAACAGAAGATGAGG...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR CCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGCCCCTTCTTCTTCAGTaGCCACATAGCTTCCTAATT +
Preference number: 4 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVPLLLQ*PHSFLI
Trigger: AATTAGGAAGCTATGTGGCCACTGAAGAAGAAGGGG...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR TCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGCAGAGGTCAAACCAATaGCTTATAAGAGCCACTCTT +
Preference number: 4 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVQRSNQ*LIRATL
Trigger: AAGAGTGGCTCTTATAAGTCATTGGTTTGACCTCTG...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR TCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGGCGAATAAGAATTCTTaGCGTTGCTTGTTAGTCCAG +
Preference number: 4 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVANKNS*RCLLVQ
Trigger: CTGGACTAACAAGCAACGTCAAGAATTCTTATTCGC...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR TCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGCACTTGCATCCTTTCTaGAAACCAGTCTTGGACAAA +
Preference number: 4 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVHLHPF*KPVLDK
Trigger: TTTGTCCAAGACTGGTTTTCAGAAAGGATGCAAGTG...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR TCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGAAGGGGGTCGAACTTTaGATAACTCCTTCTTACGTA +
Preference number: 4 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVKGVEL*ITPSYV
Trigger: TACGTAAGAAGGAGTTATTCAAAGTTCGACCCCCTT...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR TCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGTGGCCGGAGAGCATATaGAGATCTGTCATCATTTTT +
Preference number: 4 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVWPESI*RSVIIF
Trigger: AAAAATGATGACAGATCTTCATATGCTCTCCGGCCA...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR TCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGTTAAATCATTTTTGCTaGGCCTGGACTTTGTGTCCC +
Preference number: 4 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVLNHFC*AWTLCP
Trigger: GGGACACAAAGTCCAGGCTCAGCAAAAATGATTTAA...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR TCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGTCTTCATCACAGCAATaGAGTTGGGCTACATCTTGT +
Preference number: 4 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVSSSQQ*SWATSC
Trigger: ACAAGATGTAGCCCAACTTCATTGCTGTGATGAAGA...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR TCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGCTGGTAGGTTGTTTTTaGAGTCCTCTCAAATGGAGT +
Preference number: 4 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVLVGCF*SPLKWS
Trigger: ACTCCATTTGAGAGGACTTCAAAAACAACCTACCAG...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR TCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGCTGGAATATTTTCTATaGGTAACCGATGAAGGGCCA +
Preference number: 4 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVLEYFL*VTDEGP
Trigger: TGGCCCTTCATCGGTTACTCATAGAAAATATTCCAG...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR GCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGCAGGAAAGTTCGGAATaGTGGTATCATTTCTCTGCA +
Preference number: 4 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVQESSE*WYHFSA
Trigger: TGCAGAGAAATGATACCAGCATTCCGAACTTTCCTG...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR GCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGACAATGGTCTTATCATaGCTCTTCAGGAAAGTTCGG +
Preference number: 4 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVTMVLS*LFRKVR
Trigger: CCGAACTTTCCTGAAGAGGCATGATAAGACCATTGT...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR GCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGATGCTACTTAGAAACTaGCGTGATTCATCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVMLLRN*RDSSAK
Trigger: CTTGGCTGATGAATCACGGCAGTTTCTAAGTAGCAT...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541398.7
CDS-3UTR CCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGGCTTGCGCAGTATCTTaGTTGTTTAGAATGTTGGTC +
Preference number: 4 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVACAVS*LFRMLV
Trigger: GACCAACATTCTAAACAACCAAGATACTGCGCAAGC...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR CCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGTCTGCTGAGTCCTTCTaGAGTATTCTCTCCAGATTA +
Preference number: 4 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVSAESF*SILSRL
Trigger: TAATCTGGAGAGAATACTCCAGAAGGACTCAGCAGA...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR CCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGCAATGCTGCTTTCAGTaGTGCGACATAAACATCTCT +
Preference number: 4 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVQCCFQ*CDINIS
Trigger: AGAGATGTTTATGTCGCACCACTGAAAGCAGCATTG...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR TCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGAGAGCCACTCTTTCCTaGAAGAGCTGTCTATTTAAT +
Preference number: 4 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVRATLS*KSCLFN
Trigger: ATTAAATAGACAGCTCTTTCAGGAAAGAGTGGCTCT...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR GCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGTTCACAGTCCTAAACTaGACCGATAGACTTTGTTAC +
Preference number: 4 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVFTVLN*TDRLCY
Trigger: GTAACAAAGTCTATCGGTGCAGTTTAGGACTGTGAA...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR CCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGAAATATTGCTTCGCTTaGGCAAGGTTTCTAACGATG +
Preference number: 4 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVKYCFA*ARFLTM
Trigger: CATCGTTAGAAACCTTGCCCAAGCGAAGCAATATTT...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR CCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGGGTTGTTTAGAATGTTaGTCATACCCATGGTGTCAA +
Preference number: 4 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVGCLEC*SYPWCQ
Trigger: TTGACACCATGGGTATGACCAACATTCTAAACAACC...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR CCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGTCACAGAAAATGATCTaGATATTGGCAGCACTCAGA +
Preference number: 4 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVSQKMI*ILAALR
Trigger: TCTGAGTGCTGCCAATATCCAGATCATTTTCTGTGA...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR CCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGGAAAGTTCGGAATGCTaGTATCATTTCTCTGCACTT +
Preference number: 4 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVESSEC*YHFSAL
Trigger: AAGTGCAGAGAAATGATACCAGCATTCCGAACTTTC...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR CCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGACTTTGCTGGGAAAATaGGAAGCATTAAGAACGTTC +
Preference number: 4 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVTLLGK*EALRTF
Trigger: GAACGTTCTTAATGCTTCCCATTTTCCCAGCAAAGT...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541398.7
CDS-3UTR TCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGCTAGAAACTGCCTGTTaGGACTTAAAATCTGTAGAA +
Preference number: 4 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVLETAC*DLKSVE
Trigger: TTCTACAGATTTTAAGTCTCAACAGGCAGTTTCTAG...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR TCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGAAAATATACATCAGCTaGAGTTTCCAAGTGGCTTTC +
Preference number: 4 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVKIYIS*SFQVAF
Trigger: GAAAGCCACTTGGAAACTTCAGCTGATGTATATTTT...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR GCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGAAGAAAGGATACAGCTaGTTCCTTACTGTTTTCAAG +
Preference number: 4 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVKKGYS*FLTVFK
Trigger: CTTGAAAACAGTAAGGAAGCAGCTGTATCCTTTCTT...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR GCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGACAATTTCCAGTATCTaGACGTATTTTCTCTCACTC +
Preference number: 4 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVTISSI*TYFLSL
Trigger: GAGTGAGAGAAAATACGTGCAGATACTGGAAATTGT...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR GCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGGCAATTAAGATCACCTaGTTTCACCCAAATCTGAAT +
Preference number: 4 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVAIKIT*FHPNLN
Trigger: ATTCAGATTTGGGTGAAAGCAGGTGATCTTAATTGC...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000541398.7
CDS-3UTR CCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGATACTCATTATCTGTTaGAGTATAGGGCAGAAACCA +
Preference number: 4 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVILIIC*SIGQKP
Trigger: TGGTTTCTGCCCTATACTCCAACAGATAATGAGTAT...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR CCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGGTATATGTGTTTAACTaGCTTCCAAACTTCGTGACT +
Preference number: 4 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVVYVFN*LPNFVT
Trigger: AGTCACGAAGTTTGGAAGCCAGTTAAACACATATAC...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR GCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGACCCTGAAGAATAAATaGATTCTTGACATACTTGGA +
Preference number: 4 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVTLKNK*ILDILG
Trigger: TCCAAGTATGTCAAGAATGCATTTATTCTTCAGGGT...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR CCA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGTCTGAAAACCAGTCTTaGACAAACCTTAATTGTGAT +
Preference number: 4 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVSENQS*TNLNCD
Trigger: ATCACAATTAAGGTTTGTCCAAGACTGGTTTTCAGA...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR CAA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGCCAGGGCCAGCTGACTaGGGCAGCGGCACACAAATC +
Preference number: 5 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVPGPAD*GSGTQI
Trigger: GATTTGTGTGCCGCTGCCCAAGTCAGCTGGCCCTGG...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR CAA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGGCTGGTAAGAGCCAGTaGCAATCCCAGTGGGGGCCG +
Preference number: 5 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVAGKSQ*QSQWGP
Trigger: CGGCCCCCACTGGGATTGCAACTGGCTCTTACCAGC...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR CAA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGGGGGGCCTTTCCCCATaGGGATCCCAGCCAATCACT +
Preference number: 5 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVGGLSP*GSQPIT
Trigger: AGTGATTGGCTGGGATCCCAATGGGGAAAGGCCCCC...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS CCA 90 bp TCATGTAATCCCACTCGCTCCCTTACAGTCTGGGAGAGGCGTGGTTaGCATCTGGGCTTTAGCACGCTAGAGCAGCAAGTTCCACTCACC +
Preference number: 5 (lower is better)
Translates to: SCNPTRSLTVWERRG*HLGFSTLEQQVPLT
Trigger: GGTGAGTGGAACTTGCTGCTCTAGCGTGCTAAAGCCCAGATGCCAACCACGCCTCTCCCAGACTGTAAGGGAGCGAGTGGGATTACATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR CAA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGGGCGGCTGTCTCCTCTaGGAACCGCGCAGTGAAAAT +
Preference number: 5 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVGGCLL*EPRSEN
Trigger: ATTTTCACTGCGCGGTTCCAAGAGGAGACAGCCGCC...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS CCA 90 bp TGTTTCTCCAAAGCTTCATGTAATCCCACTCGCTCCCTTACAGTCTaGGAGAGGCGTGGTTGGCATCTGGGCTTTAGCACGCTAGAGCAG +
Preference number: 5 (lower is better)
Translates to: CFSKASCNPTRSLTV*ERRGWHLGFSTLEQ
Trigger: CTGCTCTAGCGTGCTAAAGCCCAGATGCCAACCACGCCTCTCCCAGACTGTAAGGGAGCGAGTGGGATTACATGAAGCTTTGGAGAAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS TCA 90 bp CCAGTTGCAATCCCAGTGGGGGCCGTAAAGAACGTGCCAGTTAGTTaGGACAGCTGGGAAAGAACTTCAATTCCTGCCTCTGATGCTCCA +
Preference number: 5 (lower is better)
Translates to: PVAIPVGAVKNVPVS*DSWERTSIPASDAP
Trigger: TGGAGCATCAGAGGCAGGAATTGAAGTTCTTTCCCAGCTGTCTCAACTAACTGGCACGTTCTTTACGGCCCCCACTGGGATTGCAACTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367682.6
ENST00000495970.1
ENST00000541398.7
CDS-3UTR CAA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGTCCATCTGCCAGAGCTaGCGCAGTATCTTGGTTGTT +
Preference number: 5 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVSICQS*RSILVV
Trigger: AACAACCAAGATACTGCGCAAGCTCTGGCAGATGGA...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS CCA 90 bp CTCCAAGGGGCACGAAGAAGTCCACGTGACCCCCTTCTTCTTCAGTaGCCACATAGCTTCCTAATTTCTCCCAGAAATCTCTCACTTCAG +
Preference number: 5 (lower is better)
Translates to: LQGARRSPRDPLLLQ*PHSFLISPRNLSLQ
Trigger: CTGAAGTGAGAGATTTCTGGGAGAAATTAGGAAGCTATGTGGCCACTGAAGAAGAAGGGGGTCACGTGGACTTCTTCGTGCCCCTTGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367682.6
ENST00000495970.1
ENST00000541398.7
CDS-3UTR CAA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGGTAGAGAAGTCCACTTaGGCCACTTGCATCCTTTCT +
Preference number: 5 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVVEKST*ATCILS
Trigger: AGAAAGGATGCAAGTGGCCAAAGTGGACTTCTCTAC...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR CAA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGCCGAACTTAACGCATTaGGGCATCCATAAGCAATCC +
Preference number: 5 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVPNLTH*GIHKQS
Trigger: GGATTGCTTATGGATGCCCAAATGCGTTAAGTTCGG...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR CAA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGTCCTCATCTTCTGTTTaGGGTTCATTCAGCGTCCCA +
Preference number: 5 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVSSSSV*GSFSVP
Trigger: TGGGACGCTGAATGAACCCAAAACAGAAGATGAGGA...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR CAA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGTGGCTTCCAGAAATATaGCTTCGCTTGGGCAAGGTT +
Preference number: 5 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVWLPEI*LRLGKV
Trigger: AACCTTGCCCAAGCGAAGCAATATTTCTGGAAGCCA...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR CAA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGCTCTTCTGCAGTTCCTaGAAGAAAGGATACAGCTGC +
Preference number: 5 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVLFCSS*KKGYSC
Trigger: GCAGCTGTATCCTTTCTTCAAGGAACTGCAGAAGAG...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR CAA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGCAAGGGGGTCGAACTTaGAATAACTCCTTCTTACGT +
Preference number: 5 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVQGGRT*NNSFLR
Trigger: ACGTAAGAAGGAGTTATTCAAAGTTCGACCCCCTTG...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR CAA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGGGCAGGCTCAGCATTTaGGTAACAATGGTCTTATCA +
Preference number: 5 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVGRLSI*VTMVLS
Trigger: TGATAAGACCATTGTTACCAAAATGCTGAGCCTGCC...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR CAA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGATCACAGCAATGAAGTaGGGCTACATCTTGTACCCT +
Preference number: 5 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVITAMK*GYILYP
Trigger: AGGGTACAAGATGTAGCCCAACTTCATTGCTGTGAT...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS GCA 90 bp GATTTGGTCAATTGCAGTGGTCAAGTCCCCACGGTCAACATGCTCTaGAGGGGTATGAAGCCTGACAGCGTAGAGAAGATTAAGGTATTC +
Preference number: 5 (lower is better)
Translates to: DLVNCSGQVPTVNML*RGMKPDSVEKIKVF
Trigger: GAATACCTTAATCTTCTCTACGCTGTCAGGCTTCATACCCCTGCAGAGCATGTTGACCGTGGGGACTTGACCACTGCAATTGACCAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR CAA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGCATACTCATTATCTGTaGGAGTATAGGGCAGAAACC +
Preference number: 5 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVHTHYL*EYRAET
Trigger: GGTTTCTGCCCTATACTCCAACAGATAATGAGTATG...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR CAA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGGAAATATTGCTTCGCTaGGGCAAGGTTTCTAACGAT +
Preference number: 5 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVEILLR*GKVSND
Trigger: ATCGTTAGAAACCTTGCCCAAGCGAAGCAATATTTC...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR CAA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGTGGTTGTTTAGAATGTaGGTCATACCCATGGTGTCA +
Preference number: 5 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVWLFRM*VIPMVS
Trigger: TGACACCATGGGTATGACCAACATTCTAAACAACCA...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR CAA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGAAAATGATCTGGATATaGGCAGCACTCAGAATCGCT +
Preference number: 5 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVKMIWI*AALRIA
Trigger: AGCGATTCTGAGTGCTGCCAATATCCAGATCATTTT...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR CAA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGACTGGTAGGTTGTTTTaGAAGTCCTCTCAAATGGAG +
Preference number: 5 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVTGRLF*KSSQME
Trigger: CTCCATTTGAGAGGACTTCAAAAACAACCTACCAGT...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR CAA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGCTATTTAATGACTTGTaGCTAAAAGGTGTCCAGGCA +
Preference number: 5 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVLFNDL*LKGVQA
Trigger: TGCCTGGACACCTTTTAGCAACAAGTCATTAAATAG...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR CAA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGTGCGCAGTATCTTGGTaGTTTAGAATGTTGGTCATA +
Preference number: 5 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVCAVSW*FRMLVI
Trigger: TATGACCAACATTCTAAACAACCAAGATACTGCGCA...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR CAA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGAAGTTGGGCTACATCTaGTACCCTAATCAGATATCT +
Preference number: 5 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVKLGYI*YPNQIS
Trigger: AGATATCTGATTAGGGTACAAGATGTAGCCCAACTT...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS TCA 90 bp GCATCCATAAGCAATCCTGTTCAGTTAAAAACTTCCAGGGCCAGCTaGCTTGGGCAGCGGCACACAAATCTTTCGGACTCAAAAAGGAAA +
Preference number: 5 (lower is better)
Translates to: ASISNPVQLKTSRAS*LGQRHTNLSDSKRK
Trigger: TTTCCTTTTTGAGTCCGAAAGATTTGTGTGCCGCTGCCCAAGTCAGCTGGCCCTGGAAGTTTTTAACTGAACAGGATTGCTTATGGATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS GCA 90 bp AGCAGCTCTGGCAGGCTCAGCATTTTGGTAACAATGGTCTTATCATaGCTCTTCAGGAAAGTTCGGAATGCTGGTATCATTTCTCTGCAC +
Preference number: 5 (lower is better)
Translates to: SSSGRLSILVTMVLS*LFRKVRNAGIISLH
Trigger: GTGCAGAGAAATGATACCAGCATTCCGAACTTTCCTGAAGAGGCATGATAAGACCATTGTTACCAAAATGCTGAGCCTGCCAGAGCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS CCA 90 bp CCTGACAGCGTAGAGAAGATTAAGGTATTCTTCAAATCTTCGGGATaGGTACAGCAGCAGCTCTGGCAGGCTCAGCATTTTGGTAACAAT +
Preference number: 5 (lower is better)
Translates to: PDSVEKIKVFFKSSG*VQQQLWQAQHFGNN
Trigger: ATTGTTACCAAAATGCTGAGCCTGCCAGAGCTGCTGCTGTACCCATCCCGAAGATTTGAAGAATACCTTAATCTTCTCTACGCTGTCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR CAA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGTGTCTATTTAATGACTaGTTGCTAAAAGGTGTCCAG +
Preference number: 5 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVCLFND*LLKGVQ
Trigger: CTGGACACCTTTTAGCAACAAGTCATTAAATAGACA...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR CAA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGTCTAGAAACTGCCTGTaGAGACTTAAAATCTGTAGA +
Preference number: 5 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVSRNCL*RLKICR
Trigger: TCTACAGATTTTAAGTCTCAACAGGCAGTTTCTAGA...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS-3UTR CAA 90 bp AGTGCAATGGAGCCATCTCAGCTTACTACAACCTCCGACTCCCGGGTACAAGTGTTCTCCATACTGCTTTaGATTGCATTTCGAAGTACT +
Preference number: 5 (lower is better)
Translates to: SAMEPSQLTTTSDSRVQVFSILL*IAFRST
Trigger: AGTACTTCGAAATGCAATCAAAAGCAGTATGGAGAA...CACTTGTACCCGGGAGTCGGAGGTTGTAGTAAGCTGAGATGGCTCCATTGCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS GCA 90 bp TCTCTGCTGTCTCCATCGCTAAATATTCCGATGCTCTGTGCCTTCTaGCCATCCAGAGCTTTTTCTATAAGATACAGAAGGCTTTCCAAG +
Preference number: 5 (lower is better)
Translates to: SLLSPSLNIPMLCAF*PSRAFSIRYRRLSK
Trigger: CTTGGAAAGCCTTCTGTATCTTATAGAAAAAGCTCTGGATGGGCAGAAGGCACAGAGCATCGGAATATTTAGCGATGGAGACAGCAGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS GCA 90 bp CTGCCACTGATGCTCTTCTGCAGTTCCTTGAAGAAAGGATACAGCTaGTTCCTTACTGTTTTCAAGGTTTCTTCTAGGAAGTCTGTGAAG +
Preference number: 5 (lower is better)
Translates to: LPLMLFCSSLKKGYS*FLTVFKVSSRKSVK
Trigger: CTTCACAGACTTCCTAGAAGAAACCTTGAAAACAGTAAGGAAGCAGCTGTATCCTTTCTTCAAGGAACTGCAGAAGAGCATCAGTGGCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367682.6
ENST00000495970.1
ENST00000541398.7
CDS CCA 90 bp ACAAGCAATGTAATGGCGCTTCCAAGCACCATACTCATTATCTGTTaGAGTATAGGGCAGAAACCATCCGAACTTAACGCATTTGGGCAT +
Preference number: 5 (lower is better)
Translates to: TSNVMALPSTILIIC*SIGQKPSELNAFGH
Trigger: ATGCCCAAATGCGTTAAGTTCGGATGGTTTCTGCCCTATACTCCAACAGATAATGAGTATGGTGCTTGGAAGCGCCATTACATTGCTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS GCA 90 bp ATTGATTTCTCTGCTGTCTCCATCGCTAAATATTCCGATGCTCTGTaGCTTCTGCCCATCCAGAGCTTTTTCTATAAGATACAGAAGGCT +
Preference number: 5 (lower is better)
Translates to: IDFSAVSIAKYSDAL*LLPIQSFFYKIQKA
Trigger: AGCCTTCTGTATCTTATAGAAAAAGCTCTGGATGGGCAGAAGGCACAGAGCATCGGAATATTTAGCGATGGAGACAGCAGAGAAATCAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS GCA 90 bp TCAGAATCTTCTTTTGACAACTCCATCAATCCATCTGCCAGAGCTTaGGCAGTATCTTGGTTGTTTAGAATGTTGGTCATACCCATGGTG +
Preference number: 5 (lower is better)
Translates to: SESSFDNSINPSARA*AVSWLFRMLVIPMV
Trigger: CACCATGGGTATGACCAACATTCTAAACAACCAAGATACTGCGCAAGCTCTGGCAGATGGATTGATGGAGTTGTCAAAAGAAGATTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367682.6
ENST00000495970.1
ENST00000541398.7
CDS TCA 90 bp TCTCCATCACCATCTCATACGCAGGAATCCGGGATGATATTAACATaGAGTGTGGCCGGAGAGCATATGAAGATCTGTCATCATTTTTAT +
Preference number: 5 (lower is better)
Translates to: SPSPSHTQESGMILT*SVAGEHMKICHHFY
Trigger: ATAAAAATGATGACAGATCTTCATATGCTCTCCGGCCACACTTCATGTTAATATCATCCCGGATTCCTGCGTATGAGATGGTGATGGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS GCA 90 bp GAAATGAAGCGTGGTAACACTGTAGAGAAGTCCACTTTGGCCACTTaGATCCTTTCTGAAAACCAGTCTTGGACAAACCTTAATTGTGAT +
Preference number: 5 (lower is better)
Translates to: EMKRGNTVEKSTLAT*ILSENQSWTNLNCD
Trigger: ATCACAATTAAGGTTTGTCCAAGACTGGTTTTCAGAAAGGATGCAAGTGGCCAAAGTGGACTTCTCTACAGTGTTACCACGCTTCATTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS CCA 90 bp TTTGACAACTCCATCAATCCATCTGCCAGAGCTTGCGCAGTATCTTaGTTGTTTAGAATGTTGGTCATACCCATGGTGTCAAACATAAAC +
Preference number: 5 (lower is better)
Translates to: FDNSINPSARACAVS*LFRMLVIPMVSNIN
Trigger: GTTTATGTTTGACACCATGGGTATGACCAACATTCTAAACAACCAAGATACTGCGCAAGCTCTGGCAGATGGATTGATGGAGTTGTCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367682.6
ENST00000495970.1
ENST00000541398.7
CDS GCA 90 bp AAATGGGAAGCATTAAGAACGTTCCAGGAAATGCTACTTAGAAACTaGCGTGATTCATCAGCCAAGGAGGTTGACTTTTTCTTTACCTCT +
Preference number: 5 (lower is better)
Translates to: KWEALRTFQEMLLRN*RDSSAKEVDFFFTS
Trigger: AGAGGTAAAGAAAAAGTCAACCTCCTTGGCTGATGAATCACGGCAGTTTCTAAGTAGCATTTCCTGGAACGTTCTTAATGCTTCCCATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541398.7
CDS CCA 90 bp TGCCTGTTGAGACTTAAAATCTGTAGAATGTCACAGAAAATGATCTaGATATTGGCAGCACTCAGAATCGCTCTGTTTGATGACAATGCT +
Preference number: 5 (lower is better)
Translates to: CLLRLKICRMSQKMI*ILAALRIALFDDNA
Trigger: AGCATTGTCATCAAACAGAGCGATTCTGAGTGCTGCCAATATCCAGATCATTTTCTGTGACATTCTACAGATTTTAAGTCTCAACAGGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS TCA 72 bp GTGCAATTAAGATCACCTGCATCTCCCCAGCTGCAGTaGGCAAAGCCGCCCGCGCCGTGCGAGCCACCGCCC +
Preference number: 6 (lower is better)
Translates to: VQLRSPASPQLQ*AKPPAPCEPPP
Trigger: GGGCGGTGGCTCGCACGGCGCGGGCGGCTTTGCTCACTGCAGCTGGGGAGATGCAGGTGATCTTAATTGCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000401414.4
CDS CAA 90 bp CTAGGAAGTGGCTATGAGGCCCGGTACAGTGGCGGCTGTCTCCTCTaGGAACCGCGCAGTGAAAATCGAGTGCGCCAACTCGGGCCGCAG +
Preference number: 6 (lower is better)
Translates to: LGSGYEARYSGGCLL*EPRSENRVRQLGPQ
Trigger: CTGCGGCCCGAGTTGGCGCACTCGATTTTCACTGCGCGGTTCCAAGAGGAGACAGCCGCCACTGTACCGGGCCTCATAGCCACTTCCTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541398.7
CDS CAA 72 bp GGCTATGAGGCCCGGTACAGTGGCGGCTGTCTCCTCTaGGAACCGCGCAGTGAAAATCGAGTGCGCCAACTC +
Preference number: 6 (lower is better)
Translates to: GYEARYSGGCLL*EPRSENRVRQL
Trigger: GAGTTGGCGCACTCGATTTTCACTGCGCGGTTCCAAGAGGAGACAGCCGCCACTGTACCGGGCCTCATAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000541398.7
CDS CCA 72 bp CCCACTCGCTCCCTTACAGTCTGGGAGAGGCGTGGTTaGCATCTGGGCTTTAGCACGCTAGAGCAGCAAGTT +
Preference number: 6 (lower is better)
Translates to: PTRSLTVWERRG*HLGFSTLEQQV
Trigger: AACTTGCTGCTCTAGCGTGCTAAAGCCCAGATGCCAACCACGCCTCTCCCAGACTGTAAGGGAGCGAGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS CCA 72 bp TGGACCACGTCTGTAGCTTCGATTCGCAGAAGTAGATaGAAGAGGGGGCCTTTCCCCATTGGGATCCCAGCC +
Preference number: 6 (lower is better)
Translates to: WTTSVASIRRSR*KRGPFPIGIPA
Trigger: GGCTGGGATCCCAATGGGGAAAGGCCCCCTCTTCCATCTACTTCTGCGAATCGAAGCTACAGACGTGGTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000367682.6
ENST00000495970.1
ENST00000541398.7
CDS TCA 72 bp AGGTGTGCAATTAAGATCACCTCTAGGAAGTGGCTATaGGGCCCGGTACAGTGGCGGCTGTCTCCTCTTGGA +
Preference number: 6 (lower is better)
Translates to: RCAIKITSRKWL*GPVQWRLSPLG
Trigger: TCCAAGAGGAGACAGCCGCCACTGTACCGGGCCTCATAGCCACTTCCTAGAGGTGATCTTAATTGCACACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000367682.6
CDS CCA 72 bp AAAGCTTCATGTAATCCCACTCGCTCCCTTACAGTCTaGGAGAGGCGTGGTTGGCATCTGGGCTTTAGCACG +
Preference number: 6 (lower is better)
Translates to: KASCNPTRSLTV*ERRGWHLGFST
Trigger: CGTGCTAAAGCCCAGATGCCAACCACGCCTCTCCCAGACTGTAAGGGAGCGAGTGGGATTACATGAAGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS TCA 72 bp GAGGTTGACTTTTTCTTTACCTCTAGGAAGTGGCTATaGGGCCCGGTACAGTGGCGGCTGTCTCCTCTTGGA +
Preference number: 6 (lower is better)
Translates to: EVDFFFTSRKWL*GPVQWRLSPLG
Trigger: TCCAAGAGGAGACAGCCGCCACTGTACCGGGCCTCATAGCCACTTCCTAGAGGTAAAGAAAAAGTCAACCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541398.7
CDS GCA 72 bp CAGCCAATCACTAAGAATGTGCTGGTAAGAGCCAGTTaGAATCCCAGTGGGGGCCGTAAAGAACGTGCCAGT +
Preference number: 6 (lower is better)
Translates to: QPITKNVLVRAS*NPSGGRKERAS
Trigger: ACTGGCACGTTCTTTACGGCCCCCACTGGGATTGCAACTGGCTCTTACCAGCACATTCTTAGTGATTGGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367682.6
ENST00000495970.1
ENST00000541398.7
CDS TCA 72 bp ATCCCAGTGGGGGCCGTAAAGAACGTGCCAGTTAGTTaGGACAGCTGGGAAAGAACTTCAATTCCTGCCTCT +
Preference number: 6 (lower is better)
Translates to: IPVGAVKNVPVS*DSWERTSIPAS
Trigger: AGAGGCAGGAATTGAAGTTCTTTCCCAGCTGTCTCAACTAACTGGCACGTTCTTTACGGCCCCCACTGGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000367682.6
ENST00000495970.1
ENST00000541398.7
CDS GCA 72 bp AATTGCAGTGGTCAAGTCCCCACGGTCAACATGCTCTaGAGGGGTATGAAGCCTGACAGCGTAGAGAAGATT +
Preference number: 6 (lower is better)
Translates to: NCSGQVPTVNML*RGMKPDSVEKI
Trigger: AATCTTCTCTACGCTGTCAGGCTTCATACCCCTGCAGAGCATGTTGACCGTGGGGACTTGACCACTGCAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS CCA 72 bp TCCAAACTTCGTGACTATTTCTCCCACACAGTGAGCTaGGCCCCATTCCTGCAGTCTGTCTCTCAGGTTATC +
Preference number: 6 (lower is better)
Translates to: SKLRDYFSHTVS*APFLQSVSQVI
Trigger: GATAACCTGAGAGACAGACTGCAGGAATGGGGCCCAGCTCACTGTGTGGGAGAAATAGTCACGAAGTTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS TCA 72 bp AGCAATCCTGTTCAGTTAAAAACTTCCAGGGCCAGCTaGCTTGGGCAGCGGCACACAAATCTTTCGGACTCA +
Preference number: 6 (lower is better)
Translates to: SNPVQLKTSRAS*LGQRHTNLSDS
Trigger: TGAGTCCGAAAGATTTGTGTGCCGCTGCCCAAGTCAGCTGGCCCTGGAAGTTTTTAACTGAACAGGATTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS CCA 72 bp TCCTGTTCAGTTAAAAACTTCCAGGGCCAGCTGACTTaGGCAGCGGCACACAAATCTTTCGGACTCAAAAAG +
Preference number: 6 (lower is better)
Translates to: SCSVKNFQGQLT*AAAHKSFGLKK
Trigger: CTTTTTGAGTCCGAAAGATTTGTGTGCCGCTGCCCAAGTCAGCTGGCCCTGGAAGTTTTTAACTGAACAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS TCA 72 bp AGCAGCAAGTTCCACTCACCCAAGGGGGTCGAACTTTaGATAACTCCTTCTTACGTAGTGCAATTTTCTCCC +
Preference number: 6 (lower is better)
Translates to: SSKFHSPKGVEL*ITPSYVVQFSP
Trigger: GGGAGAAAATTGCACTACGTAAGAAGGAGTTATTCAAAGTTCGACCCCCTTGGGTGAGTGGAACTTGCTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS CAA 72 bp GAGCAGCAAGTTCCACTCACCCAAGGGGGTCGAACTTaGAATAACTCCTTCTTACGTAGTGCAATTTTCTCC +
Preference number: 6 (lower is better)
Translates to: EQQVPLTQGGRT*NNSFLRSAIFS
Trigger: GGAGAAAATTGCACTACGTAAGAAGGAGTTATTCAAAGTTCGACCCCCTTGGGTGAGTGGAACTTGCTGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS TCA 72 bp CCATCTCATACGCAGGAATCCGGGATGATATTAACATaGAGTGTGGCCGGAGAGCATATGAAGATCTGTCAT +
Preference number: 6 (lower is better)
Translates to: PSHTQESGMILT*SVAGEHMKICH
Trigger: ATGACAGATCTTCATATGCTCTCCGGCCACACTTCATGTTAATATCATCCCGGATTCCTGCGTATGAGATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS TCA 72 bp TCCTTACTGTTTTCAAGGTTTCTTCTAGGAAGTCTGTaGAGCTGGACCACGTCTGTAGCTTCGATTCGCAGA +
Preference number: 6 (lower is better)
Translates to: SLLFSRFLLGSL*SWTTSVASIRR
Trigger: TCTGCGAATCGAAGCTACAGACGTGGTCCAGCTTCACAGACTTCCTAGAAGAAACCTTGAAAACAGTAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367682.6
ENST00000495970.1
ENST00000541398.7
CDS GCA 72 bp CGTGGTAACACTGTAGAGAAGTCCACTTTGGCCACTTaGATCCTTTCTGAAAACCAGTCTTGGACAAACCTT +
Preference number: 6 (lower is better)
Translates to: RGNTVEKSTLAT*ILSENQSWTNL
Trigger: AAGGTTTGTCCAAGACTGGTTTTCAGAAAGGATGCAAGTGGCCAAAGTGGACTTCTCTACAGTGTTACCACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS CCA 72 bp GTAATGGCGCTTCCAAGCACCATACTCATTATCTGTTaGAGTATAGGGCAGAAACCATCCGAACTTAACGCA +
Preference number: 6 (lower is better)
Translates to: VMALPSTILIIC*SIGQKPSELNA
Trigger: TGCGTTAAGTTCGGATGGTTTCTGCCCTATACTCCAACAGATAATGAGTATGGTGCTTGGAAGCGCCATTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS CCA 72 bp GTAGAGAAGATTAAGGTATTCTTCAAATCTTCGGGATaGGTACAGCAGCAGCTCTGGCAGGCTCAGCATTTT +
Preference number: 6 (lower is better)
Translates to: VEKIKVFFKSSG*VQQQLWQAQHF
Trigger: AAAATGCTGAGCCTGCCAGAGCTGCTGCTGTACCCATCCCGAAGATTTGAAGAATACCTTAATCTTCTCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS CAA 72 bp GAAATGAAGCGTGGTAACACTGTAGAGAAGTCCACTTaGGCCACTTGCATCCTTTCTGAAAACCAGTCTTGG +
Preference number: 6 (lower is better)
Translates to: EMKRGNTVEKST*ATCILSENQSW
Trigger: CCAAGACTGGTTTTCAGAAAGGATGCAAGTGGCCAAAGTGGACTTCTCTACAGTGTTACCACGCTTCATTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS CAA 72 bp GCCAGAGCTTGCGCAGTATCTTGGTTGTTTAGAATGTaGGTCATACCCATGGTGTCAAACATAAACTGCCCT +
Preference number: 6 (lower is better)
Translates to: ARACAVSWLFRM*VIPMVSNINCP
Trigger: AGGGCAGTTTATGTTTGACACCATGGGTATGACCAACATTCTAAACAACCAAGATACTGCGCAAGCTCTGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367682.6
ENST00000495970.1
ENST00000541398.7
CDS CAA 90 bp AATCCATCTGCCAGAGCTTGCGCAGTATCTTGGTTGTTTAGAATGTaGGTCATACCCATGGTGTCAAACATAAACTGCCCTATCATCCTG +
Preference number: 6 (lower is better)
Translates to: NPSARACAVSWLFRM*VIPMVSNINCPIIL
Trigger: CAGGATGATAGGGCAGTTTATGTTTGACACCATGGGTATGACCAACATTCTAAACAACCAAGATACTGCGCAAGCTCTGGCAGATGGATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367682.6
ENST00000495970.1
ENST00000541398.7
CDS CAA 90 bp GACAACTCCATCAATCCATCTGCCAGAGCTTGCGCAGTATCTTGGTaGTTTAGAATGTTGGTCATACCCATGGTGTCAAACATAAACTGC +
Preference number: 6 (lower is better)
Translates to: DNSINPSARACAVSW*FRMLVIPMVSNINC
Trigger: GCAGTTTATGTTTGACACCATGGGTATGACCAACATTCTAAACAACCAAGATACTGCGCAAGCTCTGGCAGATGGATTGATGGAGTTGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367682.6
ENST00000495970.1
ENST00000541398.7
CDS GCA 72 bp TCTCCATCGCTAAATATTCCGATGCTCTGTGCCTTCTaGCCATCCAGAGCTTTTTCTATAAGATACAGAAGG +
Preference number: 6 (lower is better)
Translates to: SPSLNIPMLCAF*PSRAFSIRYRR
Trigger: CCTTCTGTATCTTATAGAAAAAGCTCTGGATGGGCAGAAGGCACAGAGCATCGGAATATTTAGCGATGGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS CAA 72 bp ATCAATCCATCTGCCAGAGCTTGCGCAGTATCTTGGTaGTTTAGAATGTTGGTCATACCCATGGTGTCAAAC +
Preference number: 6 (lower is better)
Translates to: INPSARACAVSW*FRMLVIPMVSN
Trigger: GTTTGACACCATGGGTATGACCAACATTCTAAACAACCAAGATACTGCGCAAGCTCTGGCAGATGGATTGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000367682.6
ENST00000495970.1
ENST00000541398.7
CDS GCA 72 bp GCATTAAGAACGTTCCAGGAAATGCTACTTAGAAACTaGCGTGATTCATCAGCCAAGGAGGTTGACTTTTTC +
Preference number: 6 (lower is better)
Translates to: ALRTFQEMLLRN*RDSSAKEVDFF
Trigger: GAAAAAGTCAACCTCCTTGGCTGATGAATCACGGCAGTTTCTAAGTAGCATTTCCTGGAACGTTCTTAATGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000541398.7
CDS CCA 72 bp CTGACAACTCTAGCTCGCTTTTCTGCTGAGTCCTTCTaGAGTATTCTCTCCAGATTAATCAGTGCTTCAAAA +
Preference number: 6 (lower is better)
Translates to: LTTLARFSAESF*SILSRLISASK
Trigger: TTTTGAAGCACTGATTAATCTGGAGAGAATACTCCAGAAGGACTCAGCAGAAAAGCGAGCTAGAGTTGTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS GCA 72 bp ATGCTCTTCTGCAGTTCCTTGAAGAAAGGATACAGCTaGTTCCTTACTGTTTTCAAGGTTTCTTCTAGGAAG +
Preference number: 6 (lower is better)
Translates to: MLFCSSLKKGYS*FLTVFKVSSRK
Trigger: CTTCCTAGAAGAAACCTTGAAAACAGTAAGGAAGCAGCTGTATCCTTTCTTCAAGGAACTGCAGAAGAGCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367682.6
ENST00000495970.1
ENST00000541398.7
CDS GCA 72 bp TCTTTTGACAACTCCATCAATCCATCTGCCAGAGCTTaGGCAGTATCTTGGTTGTTTAGAATGTTGGTCATA +
Preference number: 6 (lower is better)
Translates to: SFDNSINPSARA*AVSWLFRMLVI
Trigger: TATGACCAACATTCTAAACAACCAAGATACTGCGCAAGCTCTGGCAGATGGATTGATGGAGTTGTCAAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000367682.6
ENST00000495970.1
ENST00000541398.7
CDS CCA 72 bp GGTCTTATCATGCCTCTTCAGGAAAGTTCGGAATGCTaGTATCATTTCTCTGCACTTCTCAATAGTTTTCAG +
Preference number: 6 (lower is better)
Translates to: GLIMPLQESSEC*YHFSALLNSFQ
Trigger: CTGAAAACTATTGAGAAGTGCAGAGAAATGATACCAGCATTCCGAACTTTCCTGAAGAGGCATGATAAGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS CAA 72 bp AGTTTTCAAGTTCGGTCTCACTTCTCCATACTGCTTTaGATTGCATTTCGAAGTACTGACAGCCATAGGAAC +
Preference number: 6 (lower is better)
Translates to: SFQVRSHFSILL*IAFRSTDSHRN
Trigger: GTTCCTATGGCTGTCAGTACTTCGAAATGCAATCAAAAGCAGTATGGAGAAGTGAGACCGAACTTGAAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS CAA 90 bp ATATATAGAGAAATGAAGCGTGGTAACACTGTAGAGAAGTCCACTTaGGCCACTTGCATCCTTTCTGAAAACCAGTCTTGGACAAACCTT +
Preference number: 6 (lower is better)
Translates to: IYREMKRGNTVEKST*ATCILSENQSWTNL
Trigger: AAGGTTTGTCCAAGACTGGTTTTCAGAAAGGATGCAAGTGGCCAAAGTGGACTTCTCTACAGTGTTACCACGCTTCATTTCTCTATATAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS CAA 90 bp TTGAGACTTAAAATCTGTAGAATGTCACAGAAAATGATCTGGATATaGGCAGCACTCAGAATCGCTCTGTTTGATGACAATGCTGCTTTC +
Preference number: 6 (lower is better)
Translates to: LRLKICRMSQKMIWI*AALRIALFDDNAAF
Trigger: GAAAGCAGCATTGTCATCAAACAGAGCGATTCTGAGTGCTGCCAATATCCAGATCATTTTCTGTGACATTCTACAGATTTTAAGTCTCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7
CDS GCA 72 bp AATGGTCTTATCATGCCTCTTCAGGAAAGTTCGGAATaGTGGTATCATTTCTCTGCACTTCTCAATAGTTTT +
Preference number: 6 (lower is better)
Translates to: NGLIMPLQESSE*WYHFSALLNSF
Trigger: AAAACTATTGAGAAGTGCAGAGAAATGATACCAGCATTCCGAACTTTCCTGAAGAGGCATGATAAGACCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000367682.6
ENST00000541398.7