RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ECT2 (Homo sapiens)

Ensembl gene IDs: ENSG00000114346

Ensembl transcript IDs: ENST00000232458.9, ENST00000366254.2, ENST00000392692.8, ENST00000415665.5, ENST00000417960.5, ENST00000428567.5, ENST00000437296.1, ENST00000438041.5, ENST00000441497.6, ENST00000444250.1, ENST00000460860.1, ENST00000486027.1, ENST00000540509.5

Found 316 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp AATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATAGACCACATGCTAGATCTTaGAAACGCTTGAGAAGAAAA +
Preference number: 2 (lower is better)
Translates to: NVAKSHLLLSEVAHTWHRPHARS*KRLRRK
Trigger: TTTTCTTCTCAAGCGTTTTCAAGATCTAGCATGTGG...TCTATGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
3UTR-3UTR TCA 90 bp GTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATAGAAAAATACCGTACTCTCTCTaGAACAGCTACAAACATCTT +
Preference number: 2 (lower is better)
Translates to: VAKSHLLLSEVAHTWHRKIPYSL*NSYKHL
Trigger: AAGATGTTTGTAGCTGTTTCAGAGAGAGTACGGTAT...TTTTCTATGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
3UTR-3UTR CCA 90 bp AATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATAGAATTCACAGCAGTATTTaGCACCCGCCCATAAAATTT +
Preference number: 2 (lower is better)
Translates to: NVAKSHLLLSEVAHTWHRIHSSI*HPPIKF
Trigger: AAATTTTATGGGCGGGTGCCAAATACTGCTGTGAAT...TCTATGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
3UTR-3UTR TCA 90 bp AATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATAGAACCACAATAAAAAGTTaGACATGCGCATATCTATGC +
Preference number: 2 (lower is better)
Translates to: NVAKSHLLLSEVAHTWHRTTIKS*TCAYLC
Trigger: GCATAGATATGCGCATGTTCAACTTTTTATTGTGGT...TCTATGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
3UTR-3UTR CCA 90 bp TTAAAATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCAATTCACAGCAGTATTTaGCACCCGCCCATAAAATTT +
Preference number: 2 (lower is better)
Translates to: LKCSKESFTTLRSGTYMAIHSSI*HPPIKF
Trigger: AAATTTTATGGGCGGGTGCCAAATACTGCTGTGAAT...TGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATTTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
3UTR-3UTR GCA 90 bp GAAAGGAGTGGTTATTTAAATACTTCAAACTGCACATGTGAAACAGACCCACTATTACTCTATCAGGGTTaGAAAGCTACTAATATCAGC +
Preference number: 2 (lower is better)
Translates to: ERSGYLNTSNCTCETDPLLLYQG*KATNIS
Trigger: GCTGATATTAGTAGCTTTGCAACCCTGATAGAGTAA...TAGTGGGTCTGTTTCACATGTGCAGTTTGAAGTATTTAAATAACCACTCCTTTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
3UTR-3UTR GCA 90 bp AGGGTTGCAAAGCTACTAATATCAGCTGATAGCAACTTAAATTATTGGCCTTTGTTACTCTATCAGGGTTaGAAAGCTACTAATATCAGC +
Preference number: 2 (lower is better)
Translates to: RVAKLLISADSNLNYWPLLLYQG*KATNIS
Trigger: GCTGATATTAGTAGCTTTGCAACCCTGATAGAGTAA...CAAAGGCCAATAATTTAAGTTGCTATCAGCTGATATTAGTAGCTTTGCAACCCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
3UTR-3UTR GCA 90 bp TTAAAATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATTACTCTATCAGGGTTaGAAAGCTACTAATATCAGC +
Preference number: 2 (lower is better)
Translates to: LKCSKESFTTLRSGTYMALLYQG*KATNIS
Trigger: GCTGATATTAGTAGCTTTGCAACCCTGATAGAGTAA...TGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATTTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
3UTR-3UTR GCA 90 bp AATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATAGAACATGCGCATATCTATaGATTTCACAGAAGATTAGT +
Preference number: 2 (lower is better)
Translates to: NVAKSHLLLSEVAHTWHRTCAYL*ISQKIS
Trigger: ACTAATCTTCTGTGAAATGCATAGATATGCGCATGT...TCTATGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
3UTR-3UTR CCA 90 bp TCTATCAGGGTTGCAAAGCTACTAATATCAGCTGATAGCAACTTAAATTATTGGATTCACAGCAGTATTTaGCACCCGCCCATAAAATTT +
Preference number: 2 (lower is better)
Translates to: SIRVAKLLISADSNLNYWIHSSI*HPPIKF
Trigger: AAATTTTATGGGCGGGTGCCAAATACTGCTGTGAAT...CCAATAATTTAAGTTGCTATCAGCTGATATTAGTAGCTTTGCAACCCTGATAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
3UTR-3UTR GCA 90 bp TCTATCAGGGTTGCAAAGCTACTAATATCAGCTGATAGCAACTTAAATTATTGGTTACTCTATCAGGGTTaGAAAGCTACTAATATCAGC +
Preference number: 2 (lower is better)
Translates to: SIRVAKLLISADSNLNYWLLYQG*KATNIS
Trigger: GCTGATATTAGTAGCTTTGCAACCCTGATAGAGTAA...CCAATAATTTAAGTTGCTATCAGCTGATATTAGTAGCTTTGCAACCCTGATAGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
3UTR-3UTR CAA 90 bp AATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATAGAGATTCACAGCAGTATTaGGCACCCGCCCATAAAATT +
Preference number: 3 (lower is better)
Translates to: NVAKSHLLLSEVAHTWHRDSQQY*APAHKI
Trigger: AATTTTATGGGCGGGTGCCAAATACTGCTGTGAATC...TCTATGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
3UTR-3UTR CAA 90 bp TTAAAATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCAGATTCACAGCAGTATTaGGCACCCGCCCATAAAATT +
Preference number: 3 (lower is better)
Translates to: LKCSKESFTTLRSGTYMADSQQY*APAHKI
Trigger: AATTTTATGGGCGGGTGCCAAATACTGCTGTGAATC...TGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
3UTR-3UTR CAA 90 bp GAAAGGAGTGGTTATTTAAATACTTCAAACTGCACATGTGAAACAGACCCACTAGATTCACAGCAGTATTaGGCACCCGCCCATAAAATT +
Preference number: 3 (lower is better)
Translates to: ERSGYLNTSNCTCETDPLDSQQY*APAHKI
Trigger: AATTTTATGGGCGGGTGCCAAATACTGCTGTGAATC...TAGTGGGTCTGTTTCACATGTGCAGTTTGAAGTATTTAAATAACCACTCCTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
3UTR-3UTR CAA 90 bp TCTATCAGGGTTGCAAAGCTACTAATATCAGCTGATAGCAACTTAAATTATTGGGATTCACAGCAGTATTaGGCACCCGCCCATAAAATT +
Preference number: 3 (lower is better)
Translates to: SIRVAKLLISADSNLNYWDSQQY*APAHKI
Trigger: AATTTTATGGGCGGGTGCCAAATACTGCTGTGAATC...CCAATAATTTAAGTTGCTATCAGCTGATATTAGTAGCTTTGCAACCCTGATAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
3UTR-3UTR CAA 90 bp AATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATAGAGACCACAATAAAAAGTaGAACATGCGCATATCTATG +
Preference number: 3 (lower is better)
Translates to: NVAKSHLLLSEVAHTWHRDHNKK*NMRISM
Trigger: CATAGATATGCGCATGTTCAACTTTTTATTGTGGTC...TCTATGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR TCA 90 bp AATTCATTCATGGATACTATACAAATAGATTCACAGCAGTATTTGGCACCCGCCAAGGGAATGCTCAGCTaGTGGGCGCTTACGGGGTGG +
Preference number: 4 (lower is better)
Translates to: NSFMDTIQIDSQQYLAPAKGMLS*WALTGW
Trigger: CCACCCCGTAAGCGCCCATCAGCTGAGCATTCCCTT...GGCGGGTGCCAAATACTGCTGTGAATCTATTTGTATAGTATCCATGAATGAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR TCA 90 bp GTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATAGAAAAAAGGGAATGCTCAGCTaGTGGGCGCTTACGGGGTGG +
Preference number: 4 (lower is better)
Translates to: VAKSHLLLSEVAHTWHRKKGMLS*WALTGW
Trigger: CCACCCCGTAAGCGCCCATCAGCTGAGCATTCCCTT...TTTTCTATGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTAC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR TCA 90 bp TTAAAATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCAAAGGGAATGCTCAGCTaGTGGGCGCTTACGGGGTGG +
Preference number: 4 (lower is better)
Translates to: LKCSKESFTTLRSGTYMAKGMLS*WALTGW
Trigger: CCACCCCGTAAGCGCCCATCAGCTGAGCATTCCCTT...TGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR CCA 90 bp ACAAGGGAGGGAGAAGGGATACCATTAAACTTCATGAGGCTTGTTTCCATTAGTTGCCTGCTCTGTTGGTaGCCTCACAAGCAAGGCAAA +
Preference number: 4 (lower is better)
Translates to: TREGEGIPLNFMRLVSISCLLCW*PHKQGK
Trigger: TTTGCCTTGCTTGTGAGGCCACCAACAGAGCAGGCA...ACTAATGGAAACAAGCCTCATGAAGTTTAATGGTATCCCTTCTCCCTCCCTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437296.1
CDS-3UTR TCA 90 bp GTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATAGAAAAGCTCGGGCATCCATTTaGATGCTTCCCCAGAACCAC +
Preference number: 4 (lower is better)
Translates to: VAKSHLLLSEVAHTWHRKARASI*MLPQNH
Trigger: GTGGTTCTGGGGAAGCATTCAAATGGATGCCCGAGC...TTTTCTATGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR TCA 90 bp TCTATCAGGGTTGCAAAGCTACTAATATCAGCTGATAGCAACTTAAATTATTGGAAGGGAATGCTCAGCTaGTGGGCGCTTACGGGGTGG +
Preference number: 4 (lower is better)
Translates to: SIRVAKLLISADSNLNYWKGMLS*WALTGW
Trigger: CCACCCCGTAAGCGCCCATCAGCTGAGCATTCCCTT...CCAATAATTTAAGTTGCTATCAGCTGATATTAGTAGCTTTGCAACCCTGATAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR TCA 90 bp AATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATAGAGGTCGGGTTTGGCCATaGGGACTCCTAAAAGTGCCA +
Preference number: 4 (lower is better)
Translates to: NVAKSHLLLSEVAHTWHRGRVWP*GLLKVP
Trigger: TGGCACTTTTAGGAGTCCTCATGGCCAAACCCGACC...TCTATGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR TCA 90 bp AATTCATTCATGGATACTATACAAATAGATTCACAGCAGTATTTGGCACCCGCCGGTCGGGTTTGGCCATaGGGACTCCTAAAAGTGCCA +
Preference number: 4 (lower is better)
Translates to: NSFMDTIQIDSQQYLAPAGRVWP*GLLKVP
Trigger: TGGCACTTTTAGGAGTCCTCATGGCCAAACCCGACC...GGCGGGTGCCAAATACTGCTGTGAATCTATTTGTATAGTATCCATGAATGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR CCA 90 bp AATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATAGACCCTCCACTGAGCCGTaGGATGTCATAAGAGCCCTT +
Preference number: 4 (lower is better)
Translates to: NVAKSHLLLSEVAHTWHRPSTEP*DVIRAL
Trigger: AAGGGCTCTTATGACATCCCACGGCTCAGTGGAGGG...TCTATGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR TCA 90 bp AGGGTTGCAAAGCTACTAATATCAGCTGATAGCAACTTAAATTATTGGCCTTTGGCTCGGGCATCCATTTaGATGCTTCCCCAGAACCAC +
Preference number: 4 (lower is better)
Translates to: RVAKLLISADSNLNYWPLARASI*MLPQNH
Trigger: GTGGTTCTGGGGAAGCATTCAAATGGATGCCCGAGC...CAAAGGCCAATAATTTAAGTTGCTATCAGCTGATATTAGTAGCTTTGCAACCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR TCA 90 bp TTAAAATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCAGCTCGGGCATCCATTTaGATGCTTCCCCAGAACCAC +
Preference number: 4 (lower is better)
Translates to: LKCSKESFTTLRSGTYMAARASI*MLPQNH
Trigger: GTGGTTCTGGGGAAGCATTCAAATGGATGCCCGAGC...TGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR TCA 90 bp TTAAAATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCAGGTCGGGTTTGGCCATaGGGACTCCTAAAAGTGCCA +
Preference number: 4 (lower is better)
Translates to: LKCSKESFTTLRSGTYMAGRVWP*GLLKVP
Trigger: TGGCACTTTTAGGAGTCCTCATGGCCAAACCCGACC...TGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR TCA 90 bp AATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATAGAACTTCTTCCCTCCACTaGGCCGTGGGATGTCATAAG +
Preference number: 4 (lower is better)
Translates to: NVAKSHLLLSEVAHTWHRTSSLH*AVGCHK
Trigger: CTTATGACATCCCACGGCTCAGTGGAGGGAAGAAGT...TCTATGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR CCA 90 bp AATTCATTCATGGATACTATACAAATAGATTCACAGCAGTATTTGGCACCCGCCAAGAGCCATGCCGATTaGCGCGTGATGTCAACCTCT +
Preference number: 4 (lower is better)
Translates to: NSFMDTIQIDSQQYLAPAKSHAD*RVMSTS
Trigger: AGAGGTTGACATCACGCGCCAATCGGCATGGCTCTT...GGCGGGTGCCAAATACTGCTGTGAATCTATTTGTATAGTATCCATGAATGAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232458.9
ENST00000540509.5
CDS-3UTR CCA 90 bp AATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATAGAATGCTTAAGAGAAGCTaGGGGTCGGGTTTGGCCATG +
Preference number: 4 (lower is better)
Translates to: NVAKSHLLLSEVAHTWHRMLKRS*GSGLAM
Trigger: CATGGCCAAACCCGACCCCCAGCTTCTCTTAAGCAT...TCTATGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR CCA 90 bp AATTCATTCATGGATACTATACAAATAGATTCACAGCAGTATTTGGCACCCGCCTGCCTGCTCTGTTGGTaGCCTCACAAGCAAGGCAAA +
Preference number: 4 (lower is better)
Translates to: NSFMDTIQIDSQQYLAPACLLCW*PHKQGK
Trigger: TTTGCCTTGCTTGTGAGGCCACCAACAGAGCAGGCA...GGCGGGTGCCAAATACTGCTGTGAATCTATTTGTATAGTATCCATGAATGAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR CCA 90 bp AGGGTTGCAAAGCTACTAATATCAGCTGATAGCAACTTAAATTATTGGCCTTTGCCCTCCACTGAGCCGTaGGATGTCATAAGAGCCCTT +
Preference number: 4 (lower is better)
Translates to: RVAKLLISADSNLNYWPLPSTEP*DVIRAL
Trigger: AAGGGCTCTTATGACATCCCACGGCTCAGTGGAGGG...CAAAGGCCAATAATTTAAGTTGCTATCAGCTGATATTAGTAGCTTTGCAACCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR CCA 90 bp GAAAGGAGTGGTTATTTAAATACTTCAAACTGCACATGTGAAACAGACCCACTACCCTCCACTGAGCCGTaGGATGTCATAAGAGCCCTT +
Preference number: 4 (lower is better)
Translates to: ERSGYLNTSNCTCETDPLPSTEP*DVIRAL
Trigger: AAGGGCTCTTATGACATCCCACGGCTCAGTGGAGGG...TAGTGGGTCTGTTTCACATGTGCAGTTTGAAGTATTTAAATAACCACTCCTTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR CCA 90 bp AATTCATTCATGGATACTATACAAATAGATTCACAGCAGTATTTGGCACCCGCCATTAGCTGGGCTTGGTaGCAGGCACCTGTAATCCCA +
Preference number: 4 (lower is better)
Translates to: NSFMDTIQIDSQQYLAPAISWAW*QAPVIP
Trigger: TGGGATTACAGGTGCCTGCCACCAAGCCCAGCTAAT...GGCGGGTGCCAAATACTGCTGTGAATCTATTTGTATAGTATCCATGAATGAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417960.5
ENST00000540509.5
CDS-3UTR TCA 90 bp GAAAGGAGTGGTTATTTAAATACTTCAAACTGCACATGTGAAACAGACCCACTAATGCCGATTGGCGCGTaGTGTCAACCTCTTTCCCAT +
Preference number: 4 (lower is better)
Translates to: ERSGYLNTSNCTCETDPLMPIGA*CQPLSH
Trigger: ATGGGAAAGAGGTTGACATCACGCGCCAATCGGCAT...TAGTGGGTCTGTTTCACATGTGCAGTTTGAAGTATTTAAATAACCACTCCTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232458.9
ENST00000540509.5
CDS-3UTR TCA 90 bp AGGGTTGCAAAGCTACTAATATCAGCTGATAGCAACTTAAATTATTGGCCTTTGATGCCGATTGGCGCGTaGTGTCAACCTCTTTCCCAT +
Preference number: 4 (lower is better)
Translates to: RVAKLLISADSNLNYWPLMPIGA*CQPLSH
Trigger: ATGGGAAAGAGGTTGACATCACGCGCCAATCGGCAT...CAAAGGCCAATAATTTAAGTTGCTATCAGCTGATATTAGTAGCTTTGCAACCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232458.9
ENST00000540509.5
CDS-3UTR TCA 90 bp AATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATAGAATACAACGGGCGACATaGAAATGGCAAAGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: NVAKSHLLLSEVAHTWHRIQRAT*KWQRLS
Trigger: GGAGAGCCTTTGCCATTTTCATGTCGCCCGTTGTAT...TCTATGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR TCA 90 bp GTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATAGAAAAATACAACGGGCGACATaGAAATGGCAAAGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: VAKSHLLLSEVAHTWHRKIQRAT*KWQRLS
Trigger: GGAGAGCCTTTGCCATTTTCATGTCGCCCGTTGTAT...TTTTCTATGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR TCA 90 bp TCTATCAGGGTTGCAAAGCTACTAATATCAGCTGATAGCAACTTAAATTATTGGGGTCGGGTTTGGCCATaGGGACTCCTAAAAGTGCCA +
Preference number: 4 (lower is better)
Translates to: SIRVAKLLISADSNLNYWGRVWP*GLLKVP
Trigger: TGGCACTTTTAGGAGTCCTCATGGCCAAACCCGACC...CCAATAATTTAAGTTGCTATCAGCTGATATTAGTAGCTTTGCAACCCTGATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR TCA 90 bp GAAAGGAGTGGTTATTTAAATACTTCAAACTGCACATGTGAAACAGACCCACTAACTTCTTCCCTCCACTaGGCCGTGGGATGTCATAAG +
Preference number: 4 (lower is better)
Translates to: ERSGYLNTSNCTCETDPLTSSLH*AVGCHK
Trigger: CTTATGACATCCCACGGCTCAGTGGAGGGAAGAAGT...TAGTGGGTCTGTTTCACATGTGCAGTTTGAAGTATTTAAATAACCACTCCTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR TCA 90 bp TTAAAATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCAACTTCTTCCCTCCACTaGGCCGTGGGATGTCATAAG +
Preference number: 4 (lower is better)
Translates to: LKCSKESFTTLRSGTYMATSSLH*AVGCHK
Trigger: CTTATGACATCCCACGGCTCAGTGGAGGGAAGAAGT...TGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR TCA 90 bp AATTCATTCATGGATACTATACAAATAGATTCACAGCAGTATTTGGCACCCGCCGCCTGGCCAACACAATaGAACCCCGTCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: NSFMDTIQIDSQQYLAPAAWPTQ*NPVSTK
Trigger: TTTAGTAGAGACGGGGTTTCATTGTGTTGGCCAGGC...GGCGGGTGCCAAATACTGCTGTGAATCTATTTGTATAGTATCCATGAATGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417960.5
ENST00000540509.5
CDS-3UTR TCA 90 bp AATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATAGAGCCTGGCCAACACAATaGAACCCCGTCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: NVAKSHLLLSEVAHTWHRAWPTQ*NPVSTK
Trigger: TTTAGTAGAGACGGGGTTTCATTGTGTTGGCCAGGC...TCTATGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000417960.5
ENST00000540509.5
CDS-3UTR GCA 90 bp AATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATAGACCTATGGAAAGGGAATaGTCAGCTGATGGGCGCTTA +
Preference number: 4 (lower is better)
Translates to: NVAKSHLLLSEVAHTWHRPMERE*SADGRL
Trigger: TAAGCGCCCATCAGCTGAGCATTCCCTTTCCATAGG...TCTATGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR GCA 90 bp AATTCATTCATGGATACTATACAAATAGATTCACAGCAGTATTTGGCACCCGCCTGCCACCTTGCTGACTaGTTTGAAGGAACTGGAGTG +
Preference number: 4 (lower is better)
Translates to: NSFMDTIQIDSQQYLAPACHLAD*FEGTGV
Trigger: CACTCCAGTTCCTTCAAAGCAGTCAGCAAGGTGGCA...GGCGGGTGCCAAATACTGCTGTGAATCTATTTGTATAGTATCCATGAATGAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR GCA 90 bp AATTCATTCATGGATACTATACAAATAGATTCACAGCAGTATTTGGCACCCGCCCTTAATCTCCTCTGGTaGAAGGATAGGTCCACCACG +
Preference number: 4 (lower is better)
Translates to: NSFMDTIQIDSQQYLAPALNLLW*KDRSTT
Trigger: CGTGGTGGACCTATCCTTGCACCAGAGGAGATTAAG...GGCGGGTGCCAAATACTGCTGTGAATCTATTTGTATAGTATCCATGAATGAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR GCA 90 bp GTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATAGAAAACTTAATCTCCTCTGGTaGAAGGATAGGTCCACCACG +
Preference number: 4 (lower is better)
Translates to: VAKSHLLLSEVAHTWHRKLNLLW*KDRSTT
Trigger: CGTGGTGGACCTATCCTTGCACCAGAGGAGATTAAG...TTTTCTATGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR GCA 90 bp AATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATAGAAGTAGCACATTTGCCTaGTCTGTTGGTGGCCTCACA +
Preference number: 4 (lower is better)
Translates to: NVAKSHLLLSEVAHTWHRSSTFA*SVGGLT
Trigger: TGTGAGGCCACCAACAGAGCAGGCAAATGTGCTACT...TCTATGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR GCA 90 bp AATTCATTCATGGATACTATACAAATAGATTCACAGCAGTATTTGGCACCCGCCAGTAGCACATTTGCCTaGTCTGTTGGTGGCCTCACA +
Preference number: 4 (lower is better)
Translates to: NSFMDTIQIDSQQYLAPASSTFA*SVGGLT
Trigger: TGTGAGGCCACCAACAGAGCAGGCAAATGTGCTACT...GGCGGGTGCCAAATACTGCTGTGAATCTATTTGTATAGTATCCATGAATGAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR CCA 90 bp AGGGTTGCAAAGCTACTAATATCAGCTGATAGCAACTTAAATTATTGGCCTTTGAAGAGCCATGCCGATTaGCGCGTGATGTCAACCTCT +
Preference number: 4 (lower is better)
Translates to: RVAKLLISADSNLNYWPLKSHAD*RVMSTS
Trigger: AGAGGTTGACATCACGCGCCAATCGGCATGGCTCTT...CAAAGGCCAATAATTTAAGTTGCTATCAGCTGATATTAGTAGCTTTGCAACCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232458.9
ENST00000540509.5
CDS-3UTR CCA 90 bp GTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATAGAAAACTAGGAGTGACCCTATaGAAAGGGAATGCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: VAKSHLLLSEVAHTWHRKLGVTL*KGNAQL
Trigger: CAGCTGAGCATTCCCTTTCCATAGGGTCACTCCTAG...TTTTCTATGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR CCA 90 bp AATTCATTCATGGATACTATACAAATAGATTCACAGCAGTATTTGGCACCCGCCCTAGGAGTGACCCTATaGAAAGGGAATGCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: NSFMDTIQIDSQQYLAPALGVTL*KGNAQL
Trigger: CAGCTGAGCATTCCCTTTCCATAGGGTCACTCCTAG...GGCGGGTGCCAAATACTGCTGTGAATCTATTTGTATAGTATCCATGAATGAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR CCA 90 bp AGGGTTGCAAAGCTACTAATATCAGCTGATAGCAACTTAAATTATTGGCCTTTGATGCTTAAGAGAAGCTaGGGGTCGGGTTTGGCCATG +
Preference number: 4 (lower is better)
Translates to: RVAKLLISADSNLNYWPLMLKRS*GSGLAM
Trigger: CATGGCCAAACCCGACCCCCAGCTTCTCTTAAGCAT...CAAAGGCCAATAATTTAAGTTGCTATCAGCTGATATTAGTAGCTTTGCAACCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR CCA 90 bp TTAAAATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCAATGCTTAAGAGAAGCTaGGGGTCGGGTTTGGCCATG +
Preference number: 4 (lower is better)
Translates to: LKCSKESFTTLRSGTYMAMLKRS*GSGLAM
Trigger: CATGGCCAAACCCGACCCCCAGCTTCTCTTAAGCAT...TGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR CCA 90 bp TTAAAATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATGCCTGCTCTGTTGGTaGCCTCACAAGCAAGGCAAA +
Preference number: 4 (lower is better)
Translates to: LKCSKESFTTLRSGTYMACLLCW*PHKQGK
Trigger: TTTGCCTTGCTTGTGAGGCCACCAACAGAGCAGGCA...TGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR CCA 90 bp GAAAGGAGTGGTTATTTAAATACTTCAAACTGCACATGTGAAACAGACCCACTATGCCTGCTCTGTTGGTaGCCTCACAAGCAAGGCAAA +
Preference number: 4 (lower is better)
Translates to: ERSGYLNTSNCTCETDPLCLLCW*PHKQGK
Trigger: TTTGCCTTGCTTGTGAGGCCACCAACAGAGCAGGCA...TAGTGGGTCTGTTTCACATGTGCAGTTTGAAGTATTTAAATAACCACTCCTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR CCA 90 bp TCTATCAGGGTTGCAAAGCTACTAATATCAGCTGATAGCAACTTAAATTATTGGCCCTCCACTGAGCCGTaGGATGTCATAAGAGCCCTT +
Preference number: 4 (lower is better)
Translates to: SIRVAKLLISADSNLNYWPSTEP*DVIRAL
Trigger: AAGGGCTCTTATGACATCCCACGGCTCAGTGGAGGG...CCAATAATTTAAGTTGCTATCAGCTGATATTAGTAGCTTTGCAACCCTGATAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR CCA 90 bp GAAAGGAGTGGTTATTTAAATACTTCAAACTGCACATGTGAAACAGACCCACTAATTAGCTGGGCTTGGTaGCAGGCACCTGTAATCCCA +
Preference number: 4 (lower is better)
Translates to: ERSGYLNTSNCTCETDPLISWAW*QAPVIP
Trigger: TGGGATTACAGGTGCCTGCCACCAAGCCCAGCTAAT...TAGTGGGTCTGTTTCACATGTGCAGTTTGAAGTATTTAAATAACCACTCCTTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000417960.5
ENST00000540509.5
CDS-3UTR TCA 90 bp TTAAAATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCAATACAACGGGCGACATaGAAATGGCAAAGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: LKCSKESFTTLRSGTYMAIQRAT*KWQRLS
Trigger: GGAGAGCCTTTGCCATTTTCATGTCGCCCGTTGTAT...TGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR TCA 90 bp AATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATAGAATAACTCCACCCATGTaGTGGACCAATGTCACCAAC +
Preference number: 4 (lower is better)
Translates to: NVAKSHLLLSEVAHTWHRITPPM*WTNVTN
Trigger: GTTGGTGACATTGGTCCATCACATGGGTGGAGTTAT...TCTATGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR TCA 90 bp AATTCATTCATGGATACTATACAAATAGATTCACAGCAGTATTTGGCACCCGCCATAACTCCACCCATGTaGTGGACCAATGTCACCAAC +
Preference number: 4 (lower is better)
Translates to: NSFMDTIQIDSQQYLAPAITPPM*WTNVTN
Trigger: GTTGGTGACATTGGTCCATCACATGGGTGGAGTTAT...GGCGGGTGCCAAATACTGCTGTGAATCTATTTGTATAGTATCCATGAATGAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR TCA 90 bp GTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATAGAAAACACGTCTGTCTCTCTTaGAAGCTGAGCAAGTGTTTC +
Preference number: 4 (lower is better)
Translates to: VAKSHLLLSEVAHTWHRKHVCLS*KLSKCF
Trigger: GAAACACTTGCTCAGCTTTCAAGAGAGACAGACGTG...TTTTCTATGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR TCA 90 bp AATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATAGACACGTCTGTCTCTCTTaGAAGCTGAGCAAGTGTTTC +
Preference number: 4 (lower is better)
Translates to: NVAKSHLLLSEVAHTWHRHVCLS*KLSKCF
Trigger: GAAACACTTGCTCAGCTTTCAAGAGAGACAGACGTG...TCTATGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR TCA 90 bp GAAAGGAGTGGTTATTTAAATACTTCAAACTGCACATGTGAAACAGACCCACTAATCAAAAATACCATTTaGAAGGCCGGACGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: ERSGYLNTSNCTCETDPLIKNTI*KAGRGG
Trigger: GCCACCGCGTCCGGCCTTTCAAATGGTATTTTTGAT...TAGTGGGTCTGTTTCACATGTGCAGTTTGAAGTATTTAAATAACCACTCCTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000417960.5
ENST00000540509.5
CDS-3UTR TCA 90 bp AGGGTTGCAAAGCTACTAATATCAGCTGATAGCAACTTAAATTATTGGCCTTTGATCAAAAATACCATTTaGAAGGCCGGACGCGGTGGC +
Preference number: 4 (lower is better)
Translates to: RVAKLLISADSNLNYWPLIKNTI*KAGRGG
Trigger: GCCACCGCGTCCGGCCTTTCAAATGGTATTTTTGAT...CAAAGGCCAATAATTTAAGTTGCTATCAGCTGATATTAGTAGCTTTGCAACCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000417960.5
ENST00000540509.5
CDS-3UTR GCA 90 bp AATTCATTCATGGATACTATACAAATAGATTCACAGCAGTATTTGGCACCCGCCGGGCATCCATTTGAATaGTTCCCCAGAACCACTCTT +
Preference number: 4 (lower is better)
Translates to: NSFMDTIQIDSQQYLAPAGHPFE*FPRTTL
Trigger: AAGAGTGGTTCTGGGGAAGCATTCAAATGGATGCCC...GGCGGGTGCCAAATACTGCTGTGAATCTATTTGTATAGTATCCATGAATGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR GCA 90 bp GTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATAGAAAAGGGCATCCATTTGAATaGTTCCCCAGAACCACTCTT +
Preference number: 4 (lower is better)
Translates to: VAKSHLLLSEVAHTWHRKGHPFE*FPRTTL
Trigger: AAGAGTGGTTCTGGGGAAGCATTCAAATGGATGCCC...TTTTCTATGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR GCA 90 bp GAAAGGAGTGGTTATTTAAATACTTCAAACTGCACATGTGAAACAGACCCACTACCTATGGAAAGGGAATaGTCAGCTGATGGGCGCTTA +
Preference number: 4 (lower is better)
Translates to: ERSGYLNTSNCTCETDPLPMERE*SADGRL
Trigger: TAAGCGCCCATCAGCTGAGCATTCCCTTTCCATAGG...TAGTGGGTCTGTTTCACATGTGCAGTTTGAAGTATTTAAATAACCACTCCTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR GCA 90 bp TTAAAATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATGCCACCTTGCTGACTaGTTTGAAGGAACTGGAGTG +
Preference number: 4 (lower is better)
Translates to: LKCSKESFTTLRSGTYMACHLAD*FEGTGV
Trigger: CACTCCAGTTCCTTCAAAGCAGTCAGCAAGGTGGCA...TGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR GCA 90 bp GAAAGGAGTGGTTATTTAAATACTTCAAACTGCACATGTGAAACAGACCCACTATGCCACCTTGCTGACTaGTTTGAAGGAACTGGAGTG +
Preference number: 4 (lower is better)
Translates to: ERSGYLNTSNCTCETDPLCHLAD*FEGTGV
Trigger: CACTCCAGTTCCTTCAAAGCAGTCAGCAAGGTGGCA...TAGTGGGTCTGTTTCACATGTGCAGTTTGAAGTATTTAAATAACCACTCCTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR GCA 90 bp AATTCATTCATGGATACTATACAAATAGATTCACAGCAGTATTTGGCACCCGCCCCTCTGTCACAGGGGTaGTCACCTAGAGAAATTGTT +
Preference number: 4 (lower is better)
Translates to: NSFMDTIQIDSQQYLAPAPLSQG*SPREIV
Trigger: AACAATTTCTCTAGGTGAGCACCCCTGTGACAGAGG...GGCGGGTGCCAAATACTGCTGTGAATCTATTTGTATAGTATCCATGAATGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR GCA 90 bp AATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATAGACCTCTGTCACAGGGGTaGTCACCTAGAGAAATTGTT +
Preference number: 4 (lower is better)
Translates to: NVAKSHLLLSEVAHTWHRPLSQG*SPREIV
Trigger: AACAATTTCTCTAGGTGAGCACCCCTGTGACAGAGG...TCTATGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR GCA 90 bp TTAAAATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCAAGTAGCACATTTGCCTaGTCTGTTGGTGGCCTCACA +
Preference number: 4 (lower is better)
Translates to: LKCSKESFTTLRSGTYMASSTFA*SVGGLT
Trigger: TGTGAGGCCACCAACAGAGCAGGCAAATGTGCTACT...TGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR CCA 90 bp TTAAAATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCACTAGGAGTGACCCTATaGAAAGGGAATGCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: LKCSKESFTTLRSGTYMALGVTL*KGNAQL
Trigger: CAGCTGAGCATTCCCTTTCCATAGGGTCACTCCTAG...TGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR CCA 90 bp GTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATAGAAAAAGTCTTAATCTCCTCTaGTGCAAGGATAGGTCCACC +
Preference number: 4 (lower is better)
Translates to: VAKSHLLLSEVAHTWHRKSLNLL*CKDRST
Trigger: GGTGGACCTATCCTTGCACCAGAGGAGATTAAGACT...TTTTCTATGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR CCA 90 bp AATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATAGAAGTCTTAATCTCCTCTaGTGCAAGGATAGGTCCACC +
Preference number: 4 (lower is better)
Translates to: NVAKSHLLLSEVAHTWHRSLNLL*CKDRST
Trigger: GGTGGACCTATCCTTGCACCAGAGGAGATTAAGACT...TCTATGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR CCA 90 bp TCTATCAGGGTTGCAAAGCTACTAATATCAGCTGATAGCAACTTAAATTATTGGATGCTTAAGAGAAGCTaGGGGTCGGGTTTGGCCATG +
Preference number: 4 (lower is better)
Translates to: SIRVAKLLISADSNLNYWMLKRS*GSGLAM
Trigger: CATGGCCAAACCCGACCCCCAGCTTCTCTTAAGCAT...CCAATAATTTAAGTTGCTATCAGCTGATATTAGTAGCTTTGCAACCCTGATAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR TCA 90 bp TTAAAATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCAATAACTCCACCCATGTaGTGGACCAATGTCACCAAC +
Preference number: 4 (lower is better)
Translates to: LKCSKESFTTLRSGTYMAITPPM*WTNVTN
Trigger: GTTGGTGACATTGGTCCATCACATGGGTGGAGTTAT...TGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR TCA 90 bp GAAAGGAGTGGTTATTTAAATACTTCAAACTGCACATGTGAAACAGACCCACTAATAACTCCACCCATGTaGTGGACCAATGTCACCAAC +
Preference number: 4 (lower is better)
Translates to: ERSGYLNTSNCTCETDPLITPPM*WTNVTN
Trigger: GTTGGTGACATTGGTCCATCACATGGGTGGAGTTAT...TAGTGGGTCTGTTTCACATGTGCAGTTTGAAGTATTTAAATAACCACTCCTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR TCA 90 bp GTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATAGAAAAGACTCACAGCAACCCTaGATTTTTCTCCTTGTGTAC +
Preference number: 4 (lower is better)
Translates to: VAKSHLLLSEVAHTWHRKDSQQP*IFLLVY
Trigger: GTACACAAGGAGAAAAATTCAGGGTTGCTGTGAGTC...TTTTCTATGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR TCA 90 bp AATTCATTCATGGATACTATACAAATAGATTCACAGCAGTATTTGGCACCCGCCATGTCATCTGGAAACTaGGTAGCACATTTGCCTGCT +
Preference number: 4 (lower is better)
Translates to: NSFMDTIQIDSQQYLAPAMSSGN*VAHLPA
Trigger: AGCAGGCAAATGTGCTACTCAGTTTCCAGATGACAT...GGCGGGTGCCAAATACTGCTGTGAATCTATTTGTATAGTATCCATGAATGAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR TCA 90 bp AATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATAGAATGTCATCTGGAAACTaGGTAGCACATTTGCCTGCT +
Preference number: 4 (lower is better)
Translates to: NVAKSHLLLSEVAHTWHRMSSGN*VAHLPA
Trigger: AGCAGGCAAATGTGCTACTCAGTTTCCAGATGACAT...TCTATGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR GCA 90 bp AATTCATTCATGGATACTATACAAATAGATTCACAGCAGTATTTGGCACCCGCCCAACTACAAGGTGAGTaGATCTTTCATCTCCAAGCG +
Preference number: 4 (lower is better)
Translates to: NSFMDTIQIDSQQYLAPAQLQGE*IFHLQA
Trigger: CGCTTGGAGATGAAAGATGCACTCACCTTGTAGTTG...GGCGGGTGCCAAATACTGCTGTGAATCTATTTGTATAGTATCCATGAATGAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR GCA 90 bp GAAAGGAGTGGTTATTTAAATACTTCAAACTGCACATGTGAAACAGACCCACTAGGGCATCCATTTGAATaGTTCCCCAGAACCACTCTT +
Preference number: 4 (lower is better)
Translates to: ERSGYLNTSNCTCETDPLGHPFE*FPRTTL
Trigger: AAGAGTGGTTCTGGGGAAGCATTCAAATGGATGCCC...TAGTGGGTCTGTTTCACATGTGCAGTTTGAAGTATTTAAATAACCACTCCTTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR GCA 90 bp TCTATCAGGGTTGCAAAGCTACTAATATCAGCTGATAGCAACTTAAATTATTGGCCTATGGAAAGGGAATaGTCAGCTGATGGGCGCTTA +
Preference number: 4 (lower is better)
Translates to: SIRVAKLLISADSNLNYWPMERE*SADGRL
Trigger: TAAGCGCCCATCAGCTGAGCATTCCCTTTCCATAGG...CCAATAATTTAAGTTGCTATCAGCTGATATTAGTAGCTTTGCAACCCTGATAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR GCA 90 bp TCTATCAGGGTTGCAAAGCTACTAATATCAGCTGATAGCAACTTAAATTATTGGCTTAATCTCCTCTGGTaGAAGGATAGGTCCACCACG +
Preference number: 4 (lower is better)
Translates to: SIRVAKLLISADSNLNYWLNLLW*KDRSTT
Trigger: CGTGGTGGACCTATCCTTGCACCAGAGGAGATTAAG...CCAATAATTTAAGTTGCTATCAGCTGATATTAGTAGCTTTGCAACCCTGATAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR GCA 90 bp GTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATAGAAAAAGTTCAACAAGGCTCTaGCGTCCACATTCTGGTTTT +
Preference number: 4 (lower is better)
Translates to: VAKSHLLLSEVAHTWHRKSSTRL*RPHSGF
Trigger: AAAACCAGAATGTGGACGGCAGAGCCTTGTTGAACT...TTTTCTATGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR GCA 90 bp AATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATAGAAGTTCAACAAGGCTCTaGCGTCCACATTCTGGTTTT +
Preference number: 4 (lower is better)
Translates to: NVAKSHLLLSEVAHTWHRSSTRL*RPHSGF
Trigger: AAAACCAGAATGTGGACGGCAGAGCCTTGTTGAACT...TCTATGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR GCA 90 bp AGGGTTGCAAAGCTACTAATATCAGCTGATAGCAACTTAAATTATTGGCCTTTGCCTCTGTCACAGGGGTaGTCACCTAGAGAAATTGTT +
Preference number: 4 (lower is better)
Translates to: RVAKLLISADSNLNYWPLPLSQG*SPREIV
Trigger: AACAATTTCTCTAGGTGAGCACCCCTGTGACAGAGG...CAAAGGCCAATAATTTAAGTTGCTATCAGCTGATATTAGTAGCTTTGCAACCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR GCA 90 bp TTAAAATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCACCTCTGTCACAGGGGTaGTCACCTAGAGAAATTGTT +
Preference number: 4 (lower is better)
Translates to: LKCSKESFTTLRSGTYMAPLSQG*SPREIV
Trigger: AACAATTTCTCTAGGTGAGCACCCCTGTGACAGAGG...TGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR GCA 90 bp ACAAGGGAGGGAGAAGGGATACCATTAAACTTCATGAGGCTTGTTTCCATTAGTAGACGACTCATTACATaGTTATCATTGCTGGAAGGA +
Preference number: 4 (lower is better)
Translates to: TREGEGIPLNFMRLVSISRRLIT*LSLLEG
Trigger: TCCTTCCAGCAATGATAAGCATGTAATGAGTCGTCT...ACTAATGGAAACAAGCCTCATGAAGTTTAATGGTATCCCTTCTCCCTCCCTTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437296.1
CDS-3UTR CCA 90 bp AGGGTTGCAAAGCTACTAATATCAGCTGATAGCAACTTAAATTATTGGCCTTTGAGTCTTAATCTCCTCTaGTGCAAGGATAGGTCCACC +
Preference number: 4 (lower is better)
Translates to: RVAKLLISADSNLNYWPLSLNLL*CKDRST
Trigger: GGTGGACCTATCCTTGCACCAGAGGAGATTAAGACT...CAAAGGCCAATAATTTAAGTTGCTATCAGCTGATATTAGTAGCTTTGCAACCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR CCA 90 bp AATTCATTCATGGATACTATACAAATAGATTCACAGCAGTATTTGGCACCCGCCCATGCTTATCATTGCTaGAAGGACTTCTTCCCTCCA +
Preference number: 4 (lower is better)
Translates to: NSFMDTIQIDSQQYLAPAHAYHC*KDFFPP
Trigger: TGGAGGGAAGAAGTCCTTCCAGCAATGATAAGCATG...GGCGGGTGCCAAATACTGCTGTGAATCTATTTGTATAGTATCCATGAATGAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR CCA 90 bp GTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATAGAAAACATGCTTATCATTGCTaGAAGGACTTCTTCCCTCCA +
Preference number: 4 (lower is better)
Translates to: VAKSHLLLSEVAHTWHRKHAYHC*KDFFPP
Trigger: TGGAGGGAAGAAGTCCTTCCAGCAATGATAAGCATG...TTTTCTATGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR TCA 90 bp GAAAGGAGTGGTTATTTAAATACTTCAAACTGCACATGTGAAACAGACCCACTAGACTCACAGCAACCCTaGATTTTTCTCCTTGTGTAC +
Preference number: 4 (lower is better)
Translates to: ERSGYLNTSNCTCETDPLDSQQP*IFLLVY
Trigger: GTACACAAGGAGAAAAATTCAGGGTTGCTGTGAGTC...TAGTGGGTCTGTTTCACATGTGCAGTTTGAAGTATTTAAATAACCACTCCTTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR TCA 90 bp GTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATAGAAAATCTTCAACTACAAGGTaGGTGCATCTTTCATCTCCA +
Preference number: 4 (lower is better)
Translates to: VAKSHLLLSEVAHTWHRKSSTTR*VHLSSP
Trigger: TGGAGATGAAAGATGCACTCACCTTGTAGTTGAAGA...TTTTCTATGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR TCA 90 bp AATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATAGATCTTCAACTACAAGGTaGGTGCATCTTTCATCTCCA +
Preference number: 4 (lower is better)
Translates to: NVAKSHLLLSEVAHTWHRSSTTR*VHLSSP
Trigger: TGGAGATGAAAGATGCACTCACCTTGTAGTTGAAGA...TCTATGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR TCA 90 bp AATTCATTCATGGATACTATACAAATAGATTCACAGCAGTATTTGGCACCCGCCTTGACACTGATTTCTTaGGCTCAGGAGTATTTGCCT +
Preference number: 4 (lower is better)
Translates to: NSFMDTIQIDSQQYLAPALTLIS*AQEYLP
Trigger: AGGCAAATACTCCTGAGCTCAAGAAATCAGTGTCAA...GGCGGGTGCCAAATACTGCTGTGAATCTATTTGTATAGTATCCATGAATGAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR TCA 90 bp AATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATAGATTGACACTGATTTCTTaGGCTCAGGAGTATTTGCCT +
Preference number: 4 (lower is better)
Translates to: NVAKSHLLLSEVAHTWHRLTLIS*AQEYLP
Trigger: AGGCAAATACTCCTGAGCTCAAGAAATCAGTGTCAA...TCTATGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR TCA 90 bp TCTATCAGGGTTGCAAAGCTACTAATATCAGCTGATAGCAACTTAAATTATTGGCACGTCTGTCTCTCTTaGAAGCTGAGCAAGTGTTTC +
Preference number: 4 (lower is better)
Translates to: SIRVAKLLISADSNLNYWHVCLS*KLSKCF
Trigger: GAAACACTTGCTCAGCTTTCAAGAGAGACAGACGTG...CCAATAATTTAAGTTGCTATCAGCTGATATTAGTAGCTTTGCAACCCTGATAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR TCA 90 bp TTAAAATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCAATGTCATCTGGAAACTaGGTAGCACATTTGCCTGCT +
Preference number: 4 (lower is better)
Translates to: LKCSKESFTTLRSGTYMAMSSGN*VAHLPA
Trigger: AGCAGGCAAATGTGCTACTCAGTTTCCAGATGACAT...TGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR GCA 90 bp AGGGTTGCAAAGCTACTAATATCAGCTGATAGCAACTTAAATTATTGGCCTTTGCAACTACAAGGTGAGTaGATCTTTCATCTCCAAGCG +
Preference number: 4 (lower is better)
Translates to: RVAKLLISADSNLNYWPLQLQGE*IFHLQA
Trigger: CGCTTGGAGATGAAAGATGCACTCACCTTGTAGTTG...CAAAGGCCAATAATTTAAGTTGCTATCAGCTGATATTAGTAGCTTTGCAACCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR GCA 90 bp GAAAGGAGTGGTTATTTAAATACTTCAAACTGCACATGTGAAACAGACCCACTAAGCTCTTTTGCAACTTaGCACCTTGCTGACTGCTTT +
Preference number: 4 (lower is better)
Translates to: ERSGYLNTSNCTCETDPLSSFAT*HLADCF
Trigger: AAAGCAGTCAGCAAGGTGGCAAGTTGCAAAAGAGCT...TAGTGGGTCTGTTTCACATGTGCAGTTTGAAGTATTTAAATAACCACTCCTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR GCA 90 bp AGGGTTGCAAAGCTACTAATATCAGCTGATAGCAACTTAAATTATTGGCCTTTGAGCTCTTTTGCAACTTaGCACCTTGCTGACTGCTTT +
Preference number: 4 (lower is better)
Translates to: RVAKLLISADSNLNYWPLSSFAT*HLADCF
Trigger: AAAGCAGTCAGCAAGGTGGCAAGTTGCAAAAGAGCT...CAAAGGCCAATAATTTAAGTTGCTATCAGCTGATATTAGTAGCTTTGCAACCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR GCA 90 bp TTAAAATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCAAGCTCTTTTGCAACTTaGCACCTTGCTGACTGCTTT +
Preference number: 4 (lower is better)
Translates to: LKCSKESFTTLRSGTYMASSFAT*HLADCF
Trigger: AAAGCAGTCAGCAAGGTGGCAAGTTGCAAAAGAGCT...TGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR GCA 90 bp GAAAGGAGTGGTTATTTAAATACTTCAAACTGCACATGTGAAACAGACCCACTAAGTTCAACAAGGCTCTaGCGTCCACATTCTGGTTTT +
Preference number: 4 (lower is better)
Translates to: ERSGYLNTSNCTCETDPLSSTRL*RPHSGF
Trigger: AAAACCAGAATGTGGACGGCAGAGCCTTGTTGAACT...TAGTGGGTCTGTTTCACATGTGCAGTTTGAAGTATTTAAATAACCACTCCTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR GCA 90 bp ACAAGGGAGGGAGAAGGGATACCATTAAACTTCATGAGGCTTGTTTCCATTAGTTTACTCTATCAGGGTTaGAAAGCTACTAATATCAGC +
Preference number: 4 (lower is better)
Translates to: TREGEGIPLNFMRLVSISLLYQG*KATNIS
Trigger: GCTGATATTAGTAGCTTTGCAACCCTGATAGAGTAA...ACTAATGGAAACAAGCCTCATGAAGTTTAATGGTATCCCTTCTCCCTCCCTTGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437296.1
CDS-3UTR CCA 90 bp TCTATCAGGGTTGCAAAGCTACTAATATCAGCTGATAGCAACTTAAATTATTGGAGTCTTAATCTCCTCTaGTGCAAGGATAGGTCCACC +
Preference number: 4 (lower is better)
Translates to: SIRVAKLLISADSNLNYWSLNLL*CKDRST
Trigger: GGTGGACCTATCCTTGCACCAGAGGAGATTAAGACT...CCAATAATTTAAGTTGCTATCAGCTGATATTAGTAGCTTTGCAACCCTGATAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR CCA 90 bp AATTCATTCATGGATACTATACAAATAGATTCACAGCAGTATTTGGCACCCGCCCTGCCGTCCACATTCTaGTTTTGCTTGGTTTATCTT +
Preference number: 4 (lower is better)
Translates to: NSFMDTIQIDSQQYLAPALPSTF*FCLVYL
Trigger: AAGATAAACCAAGCAAAACCAGAATGTGGACGGCAG...GGCGGGTGCCAAATACTGCTGTGAATCTATTTGTATAGTATCCATGAATGAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR CCA 90 bp GTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATAGAAAACTGCCGTCCACATTCTaGTTTTGCTTGGTTTATCTT +
Preference number: 4 (lower is better)
Translates to: VAKSHLLLSEVAHTWHRKLPSTF*FCLVYL
Trigger: AAGATAAACCAAGCAAAACCAGAATGTGGACGGCAG...TTTTCTATGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR CCA 90 bp AGGGTTGCAAAGCTACTAATATCAGCTGATAGCAACTTAAATTATTGGCCTTTGCATGCTTATCATTGCTaGAAGGACTTCTTCCCTCCA +
Preference number: 4 (lower is better)
Translates to: RVAKLLISADSNLNYWPLHAYHC*KDFFPP
Trigger: TGGAGGGAAGAAGTCCTTCCAGCAATGATAAGCATG...CAAAGGCCAATAATTTAAGTTGCTATCAGCTGATATTAGTAGCTTTGCAACCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR TCA 90 bp TTAAAATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATCTTCAACTACAAGGTaGGTGCATCTTTCATCTCCA +
Preference number: 4 (lower is better)
Translates to: LKCSKESFTTLRSGTYMASSTTR*VHLSSP
Trigger: TGGAGATGAAAGATGCACTCACCTTGTAGTTGAAGA...TGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR TCA 90 bp GAAAGGAGTGGTTATTTAAATACTTCAAACTGCACATGTGAAACAGACCCACTATTGACACTGATTTCTTaGGCTCAGGAGTATTTGCCT +
Preference number: 4 (lower is better)
Translates to: ERSGYLNTSNCTCETDPLLTLIS*AQEYLP
Trigger: AGGCAAATACTCCTGAGCTCAAGAAATCAGTGTCAA...TAGTGGGTCTGTTTCACATGTGCAGTTTGAAGTATTTAAATAACCACTCCTTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR TCA 90 bp TCTATCAGGGTTGCAAAGCTACTAATATCAGCTGATAGCAACTTAAATTATTGGATGTCATCTGGAAACTaGGTAGCACATTTGCCTGCT +
Preference number: 4 (lower is better)
Translates to: SIRVAKLLISADSNLNYWMSSGN*VAHLPA
Trigger: AGCAGGCAAATGTGCTACTCAGTTTCCAGATGACAT...CCAATAATTTAAGTTGCTATCAGCTGATATTAGTAGCTTTGCAACCCTGATAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR TCA 90 bp GTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATAGAAAACCACATGCTAGATCTTaGAAACGCTTGAGAAGAAAA +
Preference number: 4 (lower is better)
Translates to: VAKSHLLLSEVAHTWHRKPHARS*KRLRRK
Trigger: TTTTCTTCTCAAGCGTTTTCAAGATCTAGCATGTGG...TTTTCTATGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR TCA 90 bp AATTCATTCATGGATACTATACAAATAGATTCACAGCAGTATTTGGCACCCGCCCCACATGCTAGATCTTaGAAACGCTTGAGAAGAAAA +
Preference number: 4 (lower is better)
Translates to: NSFMDTIQIDSQQYLAPAPHARS*KRLRRK
Trigger: TTTTCTTCTCAAGCGTTTTCAAGATCTAGCATGTGG...GGCGGGTGCCAAATACTGCTGTGAATCTATTTGTATAGTATCCATGAATGAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR GCA 90 bp TCTATCAGGGTTGCAAAGCTACTAATATCAGCTGATAGCAACTTAAATTATTGGAGTTCAACAAGGCTCTaGCGTCCACATTCTGGTTTT +
Preference number: 4 (lower is better)
Translates to: SIRVAKLLISADSNLNYWSSTRL*RPHSGF
Trigger: AAAACCAGAATGTGGACGGCAGAGCCTTGTTGAACT...CCAATAATTTAAGTTGCTATCAGCTGATATTAGTAGCTTTGCAACCCTGATAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR GCA 90 bp GTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATAGAAAAAGACGACTCATTACATaGTTATCATTGCTGGAAGGA +
Preference number: 4 (lower is better)
Translates to: VAKSHLLLSEVAHTWHRKRRLIT*LSLLEG
Trigger: TCCTTCCAGCAATGATAAGCATGTAATGAGTCGTCT...TTTTCTATGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR GCA 90 bp AATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATAGAAGACGACTCATTACATaGTTATCATTGCTGGAAGGA +
Preference number: 4 (lower is better)
Translates to: NVAKSHLLLSEVAHTWHRRRLIT*LSLLEG
Trigger: TCCTTCCAGCAATGATAAGCATGTAATGAGTCGTCT...TCTATGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR CCA 90 bp GAAAGGAGTGGTTATTTAAATACTTCAAACTGCACATGTGAAACAGACCCACTACTGCCGTCCACATTCTaGTTTTGCTTGGTTTATCTT +
Preference number: 4 (lower is better)
Translates to: ERSGYLNTSNCTCETDPLLPSTF*FCLVYL
Trigger: AAGATAAACCAAGCAAAACCAGAATGTGGACGGCAG...TAGTGGGTCTGTTTCACATGTGCAGTTTGAAGTATTTAAATAACCACTCCTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR CCA 90 bp GAAAGGAGTGGTTATTTAAATACTTCAAACTGCACATGTGAAACAGACCCACTAAAAGTAATGCAACACTaGGTAACCTCTGTACTGGTC +
Preference number: 4 (lower is better)
Translates to: ERSGYLNTSNCTCETDPLKVMQH*VTSVLV
Trigger: GACCAGTACAGAGGTTACCCAGTGTTGCATTACTTT...TAGTGGGTCTGTTTCACATGTGCAGTTTGAAGTATTTAAATAACCACTCCTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR CCA 90 bp AGGGTTGCAAAGCTACTAATATCAGCTGATAGCAACTTAAATTATTGGCCTTTGAAAGTAATGCAACACTaGGTAACCTCTGTACTGGTC +
Preference number: 4 (lower is better)
Translates to: RVAKLLISADSNLNYWPLKVMQH*VTSVLV
Trigger: GACCAGTACAGAGGTTACCCAGTGTTGCATTACTTT...CAAAGGCCAATAATTTAAGTTGCTATCAGCTGATATTAGTAGCTTTGCAACCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR CCA 90 bp AATTCATTCATGGATACTATACAAATAGATTCACAGCAGTATTTGGCACCCGCCATTCACAGCAGTATTTaGCACCCGCCCATAAAATTT +
Preference number: 4 (lower is better)
Translates to: NSFMDTIQIDSQQYLAPAIHSSI*HPPIKF
Trigger: AAATTTTATGGGCGGGTGCCAAATACTGCTGTGAAT...GGCGGGTGCCAAATACTGCTGTGAATCTATTTGTATAGTATCCATGAATGAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR CCA 90 bp GTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATAGAAAAATTCACAGCAGTATTTaGCACCCGCCCATAAAATTT +
Preference number: 4 (lower is better)
Translates to: VAKSHLLLSEVAHTWHRKIHSSI*HPPIKF
Trigger: AAATTTTATGGGCGGGTGCCAAATACTGCTGTGAAT...TTTTCTATGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR CCA 90 bp AATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATAGATACTACTCTCAGAAGTaGCACATACATGGCATAGAA +
Preference number: 4 (lower is better)
Translates to: NVAKSHLLLSEVAHTWHRYYSQK*HIHGIE
Trigger: TTCTATGCCATGTATGTGCCACTTCTGAGAGTAGTA...TCTATGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR TCA 90 bp GAAAGGAGTGGTTATTTAAATACTTCAAACTGCACATGTGAAACAGACCCACTAACTCTTGTTTCAATCTaGGGCATCTCTTCTTCTACA +
Preference number: 4 (lower is better)
Translates to: ERSGYLNTSNCTCETDPLTLVSI*GISSST
Trigger: TGTAGAAGAAGAGATGCCTCAGATTGAAACAAGAGT...TAGTGGGTCTGTTTCACATGTGCAGTTTGAAGTATTTAAATAACCACTCCTTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000540509.5
CDS-3UTR TCA 90 bp TCTATCAGGGTTGCAAAGCTACTAATATCAGCTGATAGCAACTTAAATTATTGGTCTTCAACTACAAGGTaGGTGCATCTTTCATCTCCA +
Preference number: 4 (lower is better)
Translates to: SIRVAKLLISADSNLNYWSSTTR*VHLSSP
Trigger: TGGAGATGAAAGATGCACTCACCTTGTAGTTGAAGA...CCAATAATTTAAGTTGCTATCAGCTGATATTAGTAGCTTTGCAACCCTGATAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR TCA 90 bp AATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATAGATGTACTAAGCTTCGGTaGGAAGATAAAAGATTAGCT +
Preference number: 4 (lower is better)
Translates to: NVAKSHLLLSEVAHTWHRCTKLR*EDKRLA
Trigger: AGCTAATCTTTTATCTTCTCACCGAAGCTTAGTACA...TCTATGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR TCA 90 bp GTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATAGAAAATGTACTAAGCTTCGGTaGGAAGATAAAAGATTAGCT +
Preference number: 4 (lower is better)
Translates to: VAKSHLLLSEVAHTWHRKCTKLR*EDKRLA
Trigger: AGCTAATCTTTTATCTTCTCACCGAAGCTTAGTACA...TTTTCTATGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR TCA 90 bp AATTCATTCATGGATACTATACAAATAGATTCACAGCAGTATTTGGCACCCGCCTGTACTAAGCTTCGGTaGGAAGATAAAAGATTAGCT +
Preference number: 4 (lower is better)
Translates to: NSFMDTIQIDSQQYLAPACTKLR*EDKRLA
Trigger: AGCTAATCTTTTATCTTCTCACCGAAGCTTAGTACA...GGCGGGTGCCAAATACTGCTGTGAATCTATTTGTATAGTATCCATGAATGAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR TCA 90 bp GAAAGGAGTGGTTATTTAAATACTTCAAACTGCACATGTGAAACAGACCCACTATTTTGGAAGTTCATCTaGTGTCATCTGGAAACTGAG +
Preference number: 4 (lower is better)
Translates to: ERSGYLNTSNCTCETDPLFWKFI*CHLETE
Trigger: CTCAGTTTCCAGATGACATCAGATGAACTTCCAAAA...TAGTGGGTCTGTTTCACATGTGCAGTTTGAAGTATTTAAATAACCACTCCTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR TCA 90 bp AGGGTTGCAAAGCTACTAATATCAGCTGATAGCAACTTAAATTATTGGCCTTTGTTTTGGAAGTTCATCTaGTGTCATCTGGAAACTGAG +
Preference number: 4 (lower is better)
Translates to: RVAKLLISADSNLNYWPLFWKFI*CHLETE
Trigger: CTCAGTTTCCAGATGACATCAGATGAACTTCCAAAA...CAAAGGCCAATAATTTAAGTTGCTATCAGCTGATATTAGTAGCTTTGCAACCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR TCA 90 bp AGGGTTGCAAAGCTACTAATATCAGCTGATAGCAACTTAAATTATTGGCCTTTGCCACATGCTAGATCTTaGAAACGCTTGAGAAGAAAA +
Preference number: 4 (lower is better)
Translates to: RVAKLLISADSNLNYWPLPHARS*KRLRRK
Trigger: TTTTCTTCTCAAGCGTTTTCAAGATCTAGCATGTGG...CAAAGGCCAATAATTTAAGTTGCTATCAGCTGATATTAGTAGCTTTGCAACCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR TCA 90 bp TTAAAATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCACCACATGCTAGATCTTaGAAACGCTTGAGAAGAAAA +
Preference number: 4 (lower is better)
Translates to: LKCSKESFTTLRSGTYMAPHARS*KRLRRK
Trigger: TTTTCTTCTCAAGCGTTTTCAAGATCTAGCATGTGG...TGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATTTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR TCA 90 bp GAAAGGAGTGGTTATTTAAATACTTCAAACTGCACATGTGAAACAGACCCACTAATACCGTACTCTCTCTaGAACAGCTACAAACATCTT +
Preference number: 4 (lower is better)
Translates to: ERSGYLNTSNCTCETDPLIPYSL*NSYKHL
Trigger: AAGATGTTTGTAGCTGTTTCAGAGAGAGTACGGTAT...TAGTGGGTCTGTTTCACATGTGCAGTTTGAAGTATTTAAATAACCACTCCTTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR TCA 90 bp TTAAAATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCAATACCGTACTCTCTCTaGAACAGCTACAAACATCTT +
Preference number: 4 (lower is better)
Translates to: LKCSKESFTTLRSGTYMAIPYSL*NSYKHL
Trigger: AAGATGTTTGTAGCTGTTTCAGAGAGAGTACGGTAT...TGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATTTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR TCA 90 bp GTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATAGAAAAACCACAATAAAAAGTTaGACATGCGCATATCTATGC +
Preference number: 4 (lower is better)
Translates to: VAKSHLLLSEVAHTWHRKTTIKS*TCAYLC
Trigger: GCATAGATATGCGCATGTTCAACTTTTTATTGTGGT...TTTTCTATGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR GCA 90 bp AATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATAGATCTAAAGTCATCAACTaGTGCATAGAAATCCTGTTC +
Preference number: 4 (lower is better)
Translates to: NVAKSHLLLSEVAHTWHRSKVIN*CIEILF
Trigger: GAACAGGATTTCTATGCAGCAGTTGATGACTTTAGA...TCTATGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR GCA 90 bp GTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATAGAAAAGAAAAATGTCACCAATaGTTTTGCTCTCATCCCAAT +
Preference number: 4 (lower is better)
Translates to: VAKSHLLLSEVAHTWHRKEKCHQ*FCSHPN
Trigger: ATTGGGATGAGAGCAAAAGCATTGGTGACATTTTTC...TTTTCTATGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR GCA 90 bp AATTCATTCATGGATACTATACAAATAGATTCACAGCAGTATTTGGCACCCGCCAAGATTCTCAGCATCTaGTTTACAAATGGTGTTAGC +
Preference number: 4 (lower is better)
Translates to: NSFMDTIQIDSQQYLAPAKILSI*FTNGVS
Trigger: GCTAACACCATTTGTAAAGCAGATGCTGAGAATCTT...GGCGGGTGCCAAATACTGCTGTGAATCTATTTGTATAGTATCCATGAATGAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR GCA 90 bp AGGGTTGCAAAGCTACTAATATCAGCTGATAGCAACTTAAATTATTGGCCTTTGTTACATGCTTATCATTaGTGGAAGGACTTCTTCCCT +
Preference number: 4 (lower is better)
Translates to: RVAKLLISADSNLNYWPLLHAYH*WKDFFP
Trigger: AGGGAAGAAGTCCTTCCAGCAATGATAAGCATGTAA...CAAAGGCCAATAATTTAAGTTGCTATCAGCTGATATTAGTAGCTTTGCAACCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR GCA 90 bp GAAAGGAGTGGTTATTTAAATACTTCAAACTGCACATGTGAAACAGACCCACTATTACATGCTTATCATTaGTGGAAGGACTTCTTCCCT +
Preference number: 4 (lower is better)
Translates to: ERSGYLNTSNCTCETDPLLHAYH*WKDFFP
Trigger: AGGGAAGAAGTCCTTCCAGCAATGATAAGCATGTAA...TAGTGGGTCTGTTTCACATGTGCAGTTTGAAGTATTTAAATAACCACTCCTTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR GCA 90 bp TTAAAATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATTACATGCTTATCATTaGTGGAAGGACTTCTTCCCT +
Preference number: 4 (lower is better)
Translates to: LKCSKESFTTLRSGTYMALHAYH*WKDFFP
Trigger: AGGGAAGAAGTCCTTCCAGCAATGATAAGCATGTAA...TGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATTTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR GCA 90 bp GAAAGGAGTGGTTATTTAAATACTTCAAACTGCACATGTGAAACAGACCCACTAAGACGACTCATTACATaGTTATCATTGCTGGAAGGA +
Preference number: 4 (lower is better)
Translates to: ERSGYLNTSNCTCETDPLRRLIT*LSLLEG
Trigger: TCCTTCCAGCAATGATAAGCATGTAATGAGTCGTCT...TAGTGGGTCTGTTTCACATGTGCAGTTTGAAGTATTTAAATAACCACTCCTTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR GCA 90 bp GTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATAGAAAATTACTCTATCAGGGTTaGAAAGCTACTAATATCAGC +
Preference number: 4 (lower is better)
Translates to: VAKSHLLLSEVAHTWHRKLLYQG*KATNIS
Trigger: GCTGATATTAGTAGCTTTGCAACCCTGATAGAGTAA...TTTTCTATGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR CCA 90 bp AATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATAGACTTAGTACAAGACTTTaGGGTGTCTCCATAGTTAAT +
Preference number: 4 (lower is better)
Translates to: NVAKSHLLLSEVAHTWHRLSTRL*GVSIVN
Trigger: ATTAACTATGGAGACACCCCAAAGTCTTGTACTAAG...TCTATGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR CCA 90 bp TCTATCAGGGTTGCAAAGCTACTAATATCAGCTGATAGCAACTTAAATTATTGGAAAGTAATGCAACACTaGGTAACCTCTGTACTGGTC +
Preference number: 4 (lower is better)
Translates to: SIRVAKLLISADSNLNYWKVMQH*VTSVLV
Trigger: GACCAGTACAGAGGTTACCCAGTGTTGCATTACTTT...CCAATAATTTAAGTTGCTATCAGCTGATATTAGTAGCTTTGCAACCCTGATAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR CCA 90 bp GTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATAGAAAATCATCTGATGTCATCTaGAAACTGAGTAGCACATTT +
Preference number: 4 (lower is better)
Translates to: VAKSHLLLSEVAHTWHRKSSDVI*KLSSTF
Trigger: AAATGTGCTACTCAGTTTCCAGATGACATCAGATGA...TTTTCTATGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR CCA 90 bp AGGGTTGCAAAGCTACTAATATCAGCTGATAGCAACTTAAATTATTGGCCTTTGTACTACTCTCAGAAGTaGCACATACATGGCATAGAA +
Preference number: 4 (lower is better)
Translates to: RVAKLLISADSNLNYWPLYYSQK*HIHGIE
Trigger: TTCTATGCCATGTATGTGCCACTTCTGAGAGTAGTA...CAAAGGCCAATAATTTAAGTTGCTATCAGCTGATATTAGTAGCTTTGCAACCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR TCA 90 bp TCTATCAGGGTTGCAAAGCTACTAATATCAGCTGATAGCAACTTAAATTATTGGACTCTTGTTTCAATCTaGGGCATCTCTTCTTCTACA +
Preference number: 4 (lower is better)
Translates to: SIRVAKLLISADSNLNYWTLVSI*GISSST
Trigger: TGTAGAAGAAGAGATGCCTCAGATTGAAACAAGAGT...CCAATAATTTAAGTTGCTATCAGCTGATATTAGTAGCTTTGCAACCCTGATAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000540509.5
CDS-3UTR TCA 90 bp AGGGTTGCAAAGCTACTAATATCAGCTGATAGCAACTTAAATTATTGGCCTTTGTTAAAGACAGAATCCTaGAAGTCCGTGACTACAAAT +
Preference number: 4 (lower is better)
Translates to: RVAKLLISADSNLNYWPLLKTES*KSVTTN
Trigger: ATTTGTAGTCACGGACTTTCAGGATTCTGTCTTTAA...CAAAGGCCAATAATTTAAGTTGCTATCAGCTGATATTAGTAGCTTTGCAACCCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR TCA 90 bp TTAAAATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCAGTCTCTCTTGAAAGCTaGGCAAGTGTTTCTTTTAAA +
Preference number: 4 (lower is better)
Translates to: LKCSKESFTTLRSGTYMAVSLES*ASVSFK
Trigger: TTTAAAAGAAACACTTGCTCAGCTTTCAAGAGAGAC...TGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATTTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR TCA 90 bp AGGGTTGCAAAGCTACTAATATCAGCTGATAGCAACTTAAATTATTGGCCTTTGGTCTCTCTTGAAAGCTaGGCAAGTGTTTCTTTTAAA +
Preference number: 4 (lower is better)
Translates to: RVAKLLISADSNLNYWPLVSLES*ASVSFK
Trigger: TTTAAAAGAAACACTTGCTCAGCTTTCAAGAGAGAC...CAAAGGCCAATAATTTAAGTTGCTATCAGCTGATATTAGTAGCTTTGCAACCCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR TCA 90 bp GAAAGGAGTGGTTATTTAAATACTTCAAACTGCACATGTGAAACAGACCCACTAGTCTCTCTTGAAAGCTaGGCAAGTGTTTCTTTTAAA +
Preference number: 4 (lower is better)
Translates to: ERSGYLNTSNCTCETDPLVSLES*ASVSFK
Trigger: TTTAAAAGAAACACTTGCTCAGCTTTCAAGAGAGAC...TAGTGGGTCTGTTTCACATGTGCAGTTTGAAGTATTTAAATAACCACTCCTTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR TCA 90 bp TTAAAATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATGTACTAAGCTTCGGTaGGAAGATAAAAGATTAGCT +
Preference number: 4 (lower is better)
Translates to: LKCSKESFTTLRSGTYMACTKLR*EDKRLA
Trigger: AGCTAATCTTTTATCTTCTCACCGAAGCTTAGTACA...TGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATTTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR TCA 90 bp TCTATCAGGGTTGCAAAGCTACTAATATCAGCTGATAGCAACTTAAATTATTGGTTTTGGAAGTTCATCTaGTGTCATCTGGAAACTGAG +
Preference number: 4 (lower is better)
Translates to: SIRVAKLLISADSNLNYWFWKFI*CHLETE
Trigger: CTCAGTTTCCAGATGACATCAGATGAACTTCCAAAA...CCAATAATTTAAGTTGCTATCAGCTGATATTAGTAGCTTTGCAACCCTGATAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR TCA 90 bp TTAAAATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCAGATCTACTTAACGTATaGCTTCTCCTTTCAAAGAAG +
Preference number: 4 (lower is better)
Translates to: LKCSKESFTTLRSGTYMADLLNV*LLLSKK
Trigger: CTTCTTTGAAAGGAGAAGTCATACGTTAAGTAGATC...TGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATTTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR TCA 90 bp AGGGTTGCAAAGCTACTAATATCAGCTGATAGCAACTTAAATTATTGGCCTTTGGATCTACTTAACGTATaGCTTCTCCTTTCAAAGAAG +
Preference number: 4 (lower is better)
Translates to: RVAKLLISADSNLNYWPLDLLNV*LLLSKK
Trigger: CTTCTTTGAAAGGAGAAGTCATACGTTAAGTAGATC...CAAAGGCCAATAATTTAAGTTGCTATCAGCTGATATTAGTAGCTTTGCAACCCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR TCA 90 bp TCTATCAGGGTTGCAAAGCTACTAATATCAGCTGATAGCAACTTAAATTATTGGATACCGTACTCTCTCTaGAACAGCTACAAACATCTT +
Preference number: 4 (lower is better)
Translates to: SIRVAKLLISADSNLNYWIPYSL*NSYKHL
Trigger: AAGATGTTTGTAGCTGTTTCAGAGAGAGTACGGTAT...CCAATAATTTAAGTTGCTATCAGCTGATATTAGTAGCTTTGCAACCCTGATAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR TCA 90 bp AGGGTTGCAAAGCTACTAATATCAGCTGATAGCAACTTAAATTATTGGCCTTTGACCACAATAAAAAGTTaGACATGCGCATATCTATGC +
Preference number: 4 (lower is better)
Translates to: RVAKLLISADSNLNYWPLTTIKS*TCAYLC
Trigger: GCATAGATATGCGCATGTTCAACTTTTTATTGTGGT...CAAAGGCCAATAATTTAAGTTGCTATCAGCTGATATTAGTAGCTTTGCAACCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR TCA 90 bp GAAAGGAGTGGTTATTTAAATACTTCAAACTGCACATGTGAAACAGACCCACTAACTCTTGTTTCAATCTaGGGCATCTCTTCTACATAT +
Preference number: 4 (lower is better)
Translates to: ERSGYLNTSNCTCETDPLTLVSI*GISSTY
Trigger: ATATGTAGAAGAGATGCCTCAGATTGAAACAAGAGT...TAGTGGGTCTGTTTCACATGTGCAGTTTGAAGTATTTAAATAACCACTCCTTTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417960.5
CDS-3UTR GCA 90 bp AATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATAGAAAAGTCATCAACTGCTaGATAGAAATCCTGTTCATT +
Preference number: 4 (lower is better)
Translates to: NVAKSHLLLSEVAHTWHRKVINC*IEILFI
Trigger: AATGAACAGGATTTCTATGCAGCAGTTGATGACTTT...TCTATGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR GCA 90 bp AATTCATTCATGGATACTATACAAATAGATTCACAGCAGTATTTGGCACCCGCCAAAGTCATCAACTGCTaGATAGAAATCCTGTTCATT +
Preference number: 4 (lower is better)
Translates to: NSFMDTIQIDSQQYLAPAKVINC*IEILFI
Trigger: AATGAACAGGATTTCTATGCAGCAGTTGATGACTTT...GGCGGGTGCCAAATACTGCTGTGAATCTATTTGTATAGTATCCATGAATGAATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR GCA 90 bp TTAAAATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCAGAAAAATGTCACCAATaGTTTTGCTCTCATCCCAAT +
Preference number: 4 (lower is better)
Translates to: LKCSKESFTTLRSGTYMAEKCHQ*FCSHPN
Trigger: ATTGGGATGAGAGCAAAAGCATTGGTGACATTTTTC...TGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATTTTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR GCA 90 bp GAAAGGAGTGGTTATTTAAATACTTCAAACTGCACATGTGAAACAGACCCACTAGAAAAATGTCACCAATaGTTTTGCTCTCATCCCAAT +
Preference number: 4 (lower is better)
Translates to: ERSGYLNTSNCTCETDPLEKCHQ*FCSHPN
Trigger: ATTGGGATGAGAGCAAAAGCATTGGTGACATTTTTC...TAGTGGGTCTGTTTCACATGTGCAGTTTGAAGTATTTAAATAACCACTCCTTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR GCA 90 bp AGGGTTGCAAAGCTACTAATATCAGCTGATAGCAACTTAAATTATTGGCCTTTGAAGATTCTCAGCATCTaGTTTACAAATGGTGTTAGC +
Preference number: 4 (lower is better)
Translates to: RVAKLLISADSNLNYWPLKILSI*FTNGVS
Trigger: GCTAACACCATTTGTAAAGCAGATGCTGAGAATCTT...CAAAGGCCAATAATTTAAGTTGCTATCAGCTGATATTAGTAGCTTTGCAACCCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR GCA 90 bp TCTATCAGGGTTGCAAAGCTACTAATATCAGCTGATAGCAACTTAAATTATTGGTTACATGCTTATCATTaGTGGAAGGACTTCTTCCCT +
Preference number: 4 (lower is better)
Translates to: SIRVAKLLISADSNLNYWLHAYH*WKDFFP
Trigger: AGGGAAGAAGTCCTTCCAGCAATGATAAGCATGTAA...CCAATAATTTAAGTTGCTATCAGCTGATATTAGTAGCTTTGCAACCCTGATAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR GCA 90 bp TCTATCAGGGTTGCAAAGCTACTAATATCAGCTGATAGCAACTTAAATTATTGGAGACGACTCATTACATaGTTATCATTGCTGGAAGGA +
Preference number: 4 (lower is better)
Translates to: SIRVAKLLISADSNLNYWRRLIT*LSLLEG
Trigger: TCCTTCCAGCAATGATAAGCATGTAATGAGTCGTCT...CCAATAATTTAAGTTGCTATCAGCTGATATTAGTAGCTTTGCAACCCTGATAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR GCA 90 bp GTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATAGAAAAACATGCGCATATCTATaGATTTCACAGAAGATTAGT +
Preference number: 4 (lower is better)
Translates to: VAKSHLLLSEVAHTWHRKTCAYL*ISQKIS
Trigger: ACTAATCTTCTGTGAAATGCATAGATATGCGCATGT...TTTTCTATGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR CCA 90 bp AGGGTTGCAAAGCTACTAATATCAGCTGATAGCAACTTAAATTATTGGCCTTTGCTTAGTACAAGACTTTaGGGTGTCTCCATAGTTAAT +
Preference number: 4 (lower is better)
Translates to: RVAKLLISADSNLNYWPLLSTRL*GVSIVN
Trigger: ATTAACTATGGAGACACCCCAAAGTCTTGTACTAAG...CAAAGGCCAATAATTTAAGTTGCTATCAGCTGATATTAGTAGCTTTGCAACCCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR CCA 90 bp GAAAGGAGTGGTTATTTAAATACTTCAAACTGCACATGTGAAACAGACCCACTACTTAGTACAAGACTTTaGGGTGTCTCCATAGTTAAT +
Preference number: 4 (lower is better)
Translates to: ERSGYLNTSNCTCETDPLLSTRL*GVSIVN
Trigger: ATTAACTATGGAGACACCCCAAAGTCTTGTACTAAG...TAGTGGGTCTGTTTCACATGTGCAGTTTGAAGTATTTAAATAACCACTCCTTTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR CCA 90 bp AATTCATTCATGGATACTATACAAATAGATTCACAGCAGTATTTGGCACCCGCCCATTCTGGTTTTGCTTaGTTTATCTTGAGAAAAGCA +
Preference number: 4 (lower is better)
Translates to: NSFMDTIQIDSQQYLAPAHSGFA*FILRKA
Trigger: TGCTTTTCTCAAGATAAACCAAGCAAAACCAGAATG...GGCGGGTGCCAAATACTGCTGTGAATCTATTTGTATAGTATCCATGAATGAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR CCA 90 bp TTAAAATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATCATCTGATGTCATCTaGAAACTGAGTAGCACATTT +
Preference number: 4 (lower is better)
Translates to: LKCSKESFTTLRSGTYMASSDVI*KLSSTF
Trigger: AAATGTGCTACTCAGTTTCCAGATGACATCAGATGA...TGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATTTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR CCA 90 bp AGGGTTGCAAAGCTACTAATATCAGCTGATAGCAACTTAAATTATTGGCCTTTGTCATCTGATGTCATCTaGAAACTGAGTAGCACATTT +
Preference number: 4 (lower is better)
Translates to: RVAKLLISADSNLNYWPLSSDVI*KLSSTF
Trigger: AAATGTGCTACTCAGTTTCCAGATGACATCAGATGA...CAAAGGCCAATAATTTAAGTTGCTATCAGCTGATATTAGTAGCTTTGCAACCCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR CCA 90 bp AATTCATTCATGGATACTATACAAATAGATTCACAGCAGTATTTGGCACCCGCCGAAGTGGCACATACATaGCATAGAAAACAATCTATA +
Preference number: 4 (lower is better)
Translates to: NSFMDTIQIDSQQYLAPAEVAHT*HRKQSI
Trigger: TATAGATTGTTTTCTATGCCATGTATGTGCCACTTC...GGCGGGTGCCAAATACTGCTGTGAATCTATTTGTATAGTATCCATGAATGAATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR CCA 90 bp TCTATCAGGGTTGCAAAGCTACTAATATCAGCTGATAGCAACTTAAATTATTGGTACTACTCTCAGAAGTaGCACATACATGGCATAGAA +
Preference number: 4 (lower is better)
Translates to: SIRVAKLLISADSNLNYWYYSQK*HIHGIE
Trigger: TTCTATGCCATGTATGTGCCACTTCTGAGAGTAGTA...CCAATAATTTAAGTTGCTATCAGCTGATATTAGTAGCTTTGCAACCCTGATAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR TCA 90 bp TCTATCAGGGTTGCAAAGCTACTAATATCAGCTGATAGCAACTTAAATTATTGGGATCTACTTAACGTATaGCTTCTCCTTTCAAAGAAG +
Preference number: 4 (lower is better)
Translates to: SIRVAKLLISADSNLNYWDLLNV*LLLSKK
Trigger: CTTCTTTGAAAGGAGAAGTCATACGTTAAGTAGATC...CCAATAATTTAAGTTGCTATCAGCTGATATTAGTAGCTTTGCAACCCTGATAGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR GCA 90 bp TTAAAATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCAAAAGTCATCAACTGCTaGATAGAAATCCTGTTCATT +
Preference number: 4 (lower is better)
Translates to: LKCSKESFTTLRSGTYMAKVINC*IEILFI
Trigger: AATGAACAGGATTTCTATGCAGCAGTTGATGACTTT...TGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATTTTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR GCA 90 bp GAAAGGAGTGGTTATTTAAATACTTCAAACTGCACATGTGAAACAGACCCACTAAAAGTCATCAACTGCTaGATAGAAATCCTGTTCATT +
Preference number: 4 (lower is better)
Translates to: ERSGYLNTSNCTCETDPLKVINC*IEILFI
Trigger: AATGAACAGGATTTCTATGCAGCAGTTGATGACTTT...TAGTGGGTCTGTTTCACATGTGCAGTTTGAAGTATTTAAATAACCACTCCTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR GCA 90 bp TCTATCAGGGTTGCAAAGCTACTAATATCAGCTGATAGCAACTTAAATTATTGGAAGATTCTCAGCATCTaGTTTACAAATGGTGTTAGC +
Preference number: 4 (lower is better)
Translates to: SIRVAKLLISADSNLNYWKILSI*FTNGVS
Trigger: GCTAACACCATTTGTAAAGCAGATGCTGAGAATCTT...CCAATAATTTAAGTTGCTATCAGCTGATATTAGTAGCTTTGCAACCCTGATAGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR GCA 90 bp TTAAAATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCAACATGCGCATATCTATaGATTTCACAGAAGATTAGT +
Preference number: 4 (lower is better)
Translates to: LKCSKESFTTLRSGTYMATCAYL*ISQKIS
Trigger: ACTAATCTTCTGTGAAATGCATAGATATGCGCATGT...TGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATTTTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR GCA 90 bp GAAAGGAGTGGTTATTTAAATACTTCAAACTGCACATGTGAAACAGACCCACTAACATGCGCATATCTATaGATTTCACAGAAGATTAGT +
Preference number: 4 (lower is better)
Translates to: ERSGYLNTSNCTCETDPLTCAYL*ISQKIS
Trigger: ACTAATCTTCTGTGAAATGCATAGATATGCGCATGT...TAGTGGGTCTGTTTCACATGTGCAGTTTGAAGTATTTAAATAACCACTCCTTTC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR CCA 90 bp GAAAGGAGTGGTTATTTAAATACTTCAAACTGCACATGTGAAACAGACCCACTACATTCTGGTTTTGCTTaGTTTATCTTGAGAAAAGCA +
Preference number: 4 (lower is better)
Translates to: ERSGYLNTSNCTCETDPLHSGFA*FILRKA
Trigger: TGCTTTTCTCAAGATAAACCAAGCAAAACCAGAATG...TAGTGGGTCTGTTTCACATGTGCAGTTTGAAGTATTTAAATAACCACTCCTTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR CCA 90 bp AGGGTTGCAAAGCTACTAATATCAGCTGATAGCAACTTAAATTATTGGCCTTTGCATTCTGGTTTTGCTTaGTTTATCTTGAGAAAAGCA +
Preference number: 4 (lower is better)
Translates to: RVAKLLISADSNLNYWPLHSGFA*FILRKA
Trigger: TGCTTTTCTCAAGATAAACCAAGCAAAACCAGAATG...CAAAGGCCAATAATTTAAGTTGCTATCAGCTGATATTAGTAGCTTTGCAACCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR CCA 90 bp TTAAAATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCACATTCTGGTTTTGCTTaGTTTATCTTGAGAAAAGCA +
Preference number: 4 (lower is better)
Translates to: LKCSKESFTTLRSGTYMAHSGFA*FILRKA
Trigger: TGCTTTTCTCAAGATAAACCAAGCAAAACCAGAATG...TGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATTTTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR CCA 90 bp TCTATCAGGGTTGCAAAGCTACTAATATCAGCTGATAGCAACTTAAATTATTGGTCATCTGATGTCATCTaGAAACTGAGTAGCACATTT +
Preference number: 4 (lower is better)
Translates to: SIRVAKLLISADSNLNYWSSDVI*KLSSTF
Trigger: AAATGTGCTACTCAGTTTCCAGATGACATCAGATGA...CCAATAATTTAAGTTGCTATCAGCTGATATTAGTAGCTTTGCAACCCTGATAGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR CCA 90 bp AGGGTTGCAAAGCTACTAATATCAGCTGATAGCAACTTAAATTATTGGCCTTTGGAAGTGGCACATACATaGCATAGAAAACAATCTATA +
Preference number: 4 (lower is better)
Translates to: RVAKLLISADSNLNYWPLEVAHT*HRKQSI
Trigger: TATAGATTGTTTTCTATGCCATGTATGTGCCACTTC...CAAAGGCCAATAATTTAAGTTGCTATCAGCTGATATTAGTAGCTTTGCAACCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR CCA 90 bp TTAAAATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCAGAAGTGGCACATACATaGCATAGAAAACAATCTATA +
Preference number: 4 (lower is better)
Translates to: LKCSKESFTTLRSGTYMAEVAHT*HRKQSI
Trigger: TATAGATTGTTTTCTATGCCATGTATGTGCCACTTC...TGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATTTTAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
3UTR CAA 72 bp TTCATGGATACTATACAAATAGATTCACAGCAGTATTaGGCACCCGCCCATAAAATTTATTTACTCTATCAG +
Preference number: 4 (lower is better)
Translates to: FMDTIQIDSQQY*APAHKIYLLYQ
Trigger: CTGATAGAGTAAATAAATTTTATGGGCGGGTGCCAAATACTGCTGTGAATCTATTTGTATAGTATCCATGAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR CCA 90 bp TCTATCAGGGTTGCAAAGCTACTAATATCAGCTGATAGCAACTTAAATTATTGGGAAGTGGCACATACATaGCATAGAAAACAATCTATA +
Preference number: 4 (lower is better)
Translates to: SIRVAKLLISADSNLNYWEVAHT*HRKQSI
Trigger: TATAGATTGTTTTCTATGCCATGTATGTGCCACTTC...CCAATAATTTAAGTTGCTATCAGCTGATATTAGTAGCTTTGCAACCCTGATAGA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS CCA 90 bp TGTCCAAAAGAGCCAACAGGTGAGGGCGAAGATGCCCAGCAATACTaGGGGCTTCGGTCTCCCACTCCGCGTCAGGGCCCGGCTGCTGGG +
Preference number: 5 (lower is better)
Translates to: CPKEPTGEGEDAQQY*GLRSPTPRQGPAAG
Trigger: CCCAGCAGCCGGGCCCTGACGCGGAGTGGGAGACCGAAGCCCCCAGTATTGCTGGGCATCTTCGCCCTCACCTGTTGGCTCTTTTGGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000366254.2
ENST00000415665.5
ENST00000438041.5
CDS GCA 90 bp TCTGGTGTGTTGGAGATATCTAGGAGTGACCCTATGGAAAGGGAATaGTCAGCTGATGGGCGCTTACGGGGTGGAAATGGTGACACGTCT +
Preference number: 5 (lower is better)
Translates to: SGVLEISRSDPMERE*SADGRLRGGNGDTS
Trigger: AGACGTGTCACCATTTCCACCCCGTAAGCGCCCATCAGCTGAGCATTCCCTTTCCATAGGGTCACTCCTAGATATCTCCAACACACCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000441497.6
ENST00000540509.5
CDS TCA 90 bp ACTCATTACATGCTTATCATTGCTGGAAGGACTTCTTCCCTCCACTaGGCCGTGGGATGTCATAAGAGCCCTTCGAAGAGCTCTTTTTGG +
Preference number: 5 (lower is better)
Translates to: THYMLIIAGRTSSLH*AVGCHKSPSKSSFW
Trigger: CCAAAAAGAGCTCTTCGAAGGGCTCTTATGACATCCCACGGCTCAGTGGAGGGAAGAAGTCCTTCCAGCAATGATAAGCATGTAATGAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000441497.6
ENST00000486027.1
ENST00000540509.5
CDS GCA 90 bp GGGATACCTGCTAATGATGATGTGCTAGAAAGACGACTCATTACATaGTTATCATTGCTGGAAGGACTTCTTCCCTCCACTGAGCCGTGG +
Preference number: 5 (lower is better)
Translates to: GIPANDDVLERRLIT*LSLLEGLLPSTEPW
Trigger: CCACGGCTCAGTGGAGGGAAGAAGTCCTTCCAGCAATGATAAGCATGTAATGAGTCGTCTTTCTAGCACATCATCATTAGCAGGTATCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000441497.6
ENST00000540509.5
CDS CCA 90 bp ACATGCTTATCATTGCTGGAAGGACTTCTTCCCTCCACTGAGCCGTaGGATGTCATAAGAGCCCTTCGAAGAGCTCTTTTTGGAGTTTTG +
Preference number: 5 (lower is better)
Translates to: TCLSLLEGLLPSTEP*DVIRALRRALFGVL
Trigger: CAAAACTCCAAAAAGAGCTCTTCGAAGGGCTCTTATGACATCCCACGGCTCAGTGGAGGGAAGAAGTCCTTCCAGCAATGATAAGCATGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000441497.6
ENST00000486027.1
ENST00000540509.5
CDS TCA 90 bp CGCTTACGGGGTGGAAATGGTGACACGTCTGTCTCTCTTGAAAGCTaGGCAAGTGTTTCTTTTAAACGACGTCGTTTGCGATTGCTGTTA +
Preference number: 5 (lower is better)
Translates to: RLRGGNGDTSVSLES*ASVSFKRRRLRLLL
Trigger: TAACAGCAATCGCAAACGACGTCGTTTAAAAGAAACACTTGCTCAGCTTTCAAGAGAGACAGACGTGTCACCATTTCCACCCCGTAAGCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000441497.6
ENST00000540509.5
CDS GCA 90 bp TCATTGAAGAGGAAGAGAGTTACTTGTTCTCCTCTGTCACAGGGGTaGTCACCTAGAGAAATTGTTTCAACCCGCTGTACTAAGCTTCGG +
Preference number: 5 (lower is better)
Translates to: SLKRKRVTCSPLSQG*SPREIVSTRCTKLR
Trigger: CCGAAGCTTAGTACAGCGGGTTGAAACAATTTCTCTAGGTGAGCACCCCTGTGACAGAGGAGAACAAGTAACTCTCTTCCTCTTCAATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000441497.6
ENST00000460860.1
ENST00000540509.5
CDS GCA 90 bp GGAAGTTCATCTGATGTCATCTGGAAACTGAGTAGCACATTTGCCTaGTCTGTTGGTGGCCTCACAAGCAAGGCAAAAGCATTATGGCAA +
Preference number: 5 (lower is better)
Translates to: GSSSDVIWKLSSTFA*SVGGLTSKAKALWQ
Trigger: TTGCCATAATGCTTTTGCCTTGCTTGTGAGGCCACCAACAGAGCAGGCAAATGTGCTACTCAGTTTCCAGATGACATCAGATGAACTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000441497.6
ENST00000486027.1
ENST00000540509.5
CDS-3UTR CAA 90 bp AATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATAGAAGCTGGGGGTCGGGTTaGGCCATGAGGACTCCTAAA +
Preference number: 5 (lower is better)
Translates to: NVAKSHLLLSEVAHTWHRSWGSG*AMRTPK
Trigger: TTTAGGAGTCCTCATGGCCAAACCCGACCCCCAGCT...TCTATGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR CAA 90 bp AATTCATTCATGGATACTATACAAATAGATTCACAGCAGTATTTGGCACCCGCCAGCTGGGGGTCGGGTTaGGCCATGAGGACTCCTAAA +
Preference number: 5 (lower is better)
Translates to: NSFMDTIQIDSQQYLAPASWGSG*AMRTPK
Trigger: TTTAGGAGTCCTCATGGCCAAACCCGACCCCCAGCT...GGCGGGTGCCAAATACTGCTGTGAATCTATTTGTATAGTATCCATGAATGAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS GCA 90 bp CTGGGTAACCTCTGTACTGGTCGGATAAGAAGTTCAACAAGGCTCTaGCGTCCACATTCTGGTTTTGCTTGGTTTATCTTGAGAAAAGCA +
Preference number: 5 (lower is better)
Translates to: LGNLCTGRIRSSTRL*RPHSGFAWFILRKA
Trigger: TGCTTTTCTCAAGATAAACCAAGCAAAACCAGAATGTGGACGGCAGAGCCTTGTTGAACTTCTTATCCGACCAGTACAGAGGTTACCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000441497.6
ENST00000540509.5
CDS GCA 90 bp TGGGTAATTGCTAATGATGATGTGCTAGAAAGACGACTCATTACATaGTTATCATTGCTGGAAGGACTTCTTCCCTCCACTGAGCCGTGG +
Preference number: 5 (lower is better)
Translates to: WVIANDDVLERRLIT*LSLLEGLLPSTEPW
Trigger: CCACGGCTCAGTGGAGGGAAGAAGTCCTTCCAGCAATGATAAGCATGTAATGAGTCGTCTTTCTAGCACATCATCATTAGCAATTACCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000437296.1
ENST00000486027.1
CDS-3UTR CAA 90 bp TTAAAATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCAAGCTGGGGGTCGGGTTaGGCCATGAGGACTCCTAAA +
Preference number: 5 (lower is better)
Translates to: LKCSKESFTTLRSGTYMASWGSG*AMRTPK
Trigger: TTTAGGAGTCCTCATGGCCAAACCCGACCCCCAGCT...TGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATTTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR CAA 90 bp GAAAGGAGTGGTTATTTAAATACTTCAAACTGCACATGTGAAACAGACCCACTAAGCTGGGGGTCGGGTTaGGCCATGAGGACTCCTAAA +
Preference number: 5 (lower is better)
Translates to: ERSGYLNTSNCTCETDPLSWGSG*AMRTPK
Trigger: TTTAGGAGTCCTCATGGCCAAACCCGACCCCCAGCT...TAGTGGGTCTGTTTCACATGTGCAGTTTGAAGTATTTAAATAACCACTCCTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR CAA 90 bp GTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATAGAAAACATTTGCCTGCTCTGTaGGTGGCCTCACAAGCAAGG +
Preference number: 5 (lower is better)
Translates to: VAKSHLLLSEVAHTWHRKHLPAL*VASQAR
Trigger: CCTTGCTTGTGAGGCCACCAACAGAGCAGGCAAATG...TTTTCTATGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR CAA 90 bp AATTCATTCATGGATACTATACAAATAGATTCACAGCAGTATTTGGCACCCGCCCATTTGCCTGCTCTGTaGGTGGCCTCACAAGCAAGG +
Preference number: 5 (lower is better)
Translates to: NSFMDTIQIDSQQYLAPAHLPAL*VASQAR
Trigger: CCTTGCTTGTGAGGCCACCAACAGAGCAGGCAAATG...GGCGGGTGCCAAATACTGCTGTGAATCTATTTGTATAGTATCCATGAATGAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR CAA 90 bp AATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATAGACATTTGCCTGCTCTGTaGGTGGCCTCACAAGCAAGG +
Preference number: 5 (lower is better)
Translates to: NVAKSHLLLSEVAHTWHRHLPAL*VASQAR
Trigger: CCTTGCTTGTGAGGCCACCAACAGAGCAGGCAAATG...TCTATGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS GCA 90 bp AAAGATATCTGGGATGCTACCAAAAATAGTCTTAATCTCCTCTGGTaGAAGGATAGGTCCACCACGTTGTCCTTCCTCTTCCAATGGTAC +
Preference number: 5 (lower is better)
Translates to: KDIWDATKNSLNLLW*KDRSTTLSFLFQWY
Trigger: GTACCATTGGAAGAGGAAGGACAACGTGGTGGACCTATCCTTGCACCAGAGGAGATTAAGACTATTTTTGGTAGCATCCCAGATATCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000441497.6
ENST00000444250.1
ENST00000540509.5
CDS CCA 90 bp ATCAAAGATATCTGGGATGCTACCAAAAATAGTCTTAATCTCCTCTaGTGCAAGGATAGGTCCACCACGTTGTCCTTCCTCTTCCAATGG +
Preference number: 5 (lower is better)
Translates to: IKDIWDATKNSLNLL*CKDRSTTLSFLFQW
Trigger: CCATTGGAAGAGGAAGGACAACGTGGTGGACCTATCCTTGCACCAGAGGAGATTAAGACTATTTTTGGTAGCATCCCAGATATCTTTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000441497.6
ENST00000444250.1
ENST00000540509.5
CDS-3UTR CAA 90 bp AATTCATTCATGGATACTATACAAATAGATTCACAGCAGTATTTGGCACCCGCCAGCTCGGGCATCCATTaGAATGCTTCCCCAGAACCA +
Preference number: 5 (lower is better)
Translates to: NSFMDTIQIDSQQYLAPASSGIH*NASPEP
Trigger: TGGTTCTGGGGAAGCATTCAAATGGATGCCCGAGCT...GGCGGGTGCCAAATACTGCTGTGAATCTATTTGTATAGTATCCATGAATGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR CAA 90 bp GTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATAGAAAAGATAGGTCCACCACGTaGTCCTTCCTCTTCCAATGG +
Preference number: 5 (lower is better)
Translates to: VAKSHLLLSEVAHTWHRKDRSTT*SFLFQW
Trigger: CCATTGGAAGAGGAAGGACAACGTGGTGGACCTATC...TTTTCTATGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR CAA 90 bp AATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATAGAGATAGGTCCACCACGTaGTCCTTCCTCTTCCAATGG +
Preference number: 5 (lower is better)
Translates to: NVAKSHLLLSEVAHTWHRDRSTT*SFLFQW
Trigger: CCATTGGAAGAGGAAGGACAACGTGGTGGACCTATC...TCTATGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR CAA 90 bp AATTCATTCATGGATACTATACAAATAGATTCACAGCAGTATTTGGCACCCGCCGATAGGTCCACCACGTaGTCCTTCCTCTTCCAATGG +
Preference number: 5 (lower is better)
Translates to: NSFMDTIQIDSQQYLAPADRSTT*SFLFQW
Trigger: CCATTGGAAGAGGAAGGACAACGTGGTGGACCTATC...GGCGGGTGCCAAATACTGCTGTGAATCTATTTGTATAGTATCCATGAATGAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR CAA 90 bp GAAAGGAGTGGTTATTTAAATACTTCAAACTGCACATGTGAAACAGACCCACTAAGCTCGGGCATCCATTaGAATGCTTCCCCAGAACCA +
Preference number: 5 (lower is better)
Translates to: ERSGYLNTSNCTCETDPLSSGIH*NASPEP
Trigger: TGGTTCTGGGGAAGCATTCAAATGGATGCCCGAGCT...TAGTGGGTCTGTTTCACATGTGCAGTTTGAAGTATTTAAATAACCACTCCTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR CAA 90 bp TTAAAATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCAAGCTCGGGCATCCATTaGAATGCTTCCCCAGAACCA +
Preference number: 5 (lower is better)
Translates to: LKCSKESFTTLRSGTYMASSGIH*NASPEP
Trigger: TGGTTCTGGGGAAGCATTCAAATGGATGCCCGAGCT...TGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR CAA 90 bp AATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATAGAGAGGAAGAGAGTTACTaGTTCTCCTCTGTCACAGGG +
Preference number: 5 (lower is better)
Translates to: NVAKSHLLLSEVAHTWHREEESY*FSSVTG
Trigger: CCCTGTGACAGAGGAGAACAAGTAACTCTCTTCCTC...TCTATGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR CAA 90 bp GTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATAGAAAAGAGGAAGAGAGTTACTaGTTCTCCTCTGTCACAGGG +
Preference number: 5 (lower is better)
Translates to: VAKSHLLLSEVAHTWHRKEEESY*FSSVTG
Trigger: CCCTGTGACAGAGGAGAACAAGTAACTCTCTTCCTC...TTTTCTATGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR CAA 90 bp GTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATAGAAAACGACGTCGTTTGCGATaGCTGTTAGGGGTATTTAGA +
Preference number: 5 (lower is better)
Translates to: VAKSHLLLSEVAHTWHRKRRRLR*LLGVFR
Trigger: TCTAAATACCCCTAACAGCAATCGCAAACGACGTCG...TTTTCTATGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR CAA 90 bp AATTCATTCATGGATACTATACAAATAGATTCACAGCAGTATTTGGCACCCGCCCGACGTCGTTTGCGATaGCTGTTAGGGGTATTTAGA +
Preference number: 5 (lower is better)
Translates to: NSFMDTIQIDSQQYLAPARRRLR*LLGVFR
Trigger: TCTAAATACCCCTAACAGCAATCGCAAACGACGTCG...GGCGGGTGCCAAATACTGCTGTGAATCTATTTGTATAGTATCCATGAATGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR CAA 90 bp GTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATAGAAAACTAGACTCTGGTGTGTaGGAGATATCTAGGAGTGAC +
Preference number: 5 (lower is better)
Translates to: VAKSHLLLSEVAHTWHRKLDSGV*EISRSD
Trigger: GTCACTCCTAGATATCTCCAACACACCAGAGTCTAG...TTTTCTATGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR CAA 90 bp AATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATAGACTAGACTCTGGTGTGTaGGAGATATCTAGGAGTGAC +
Preference number: 5 (lower is better)
Translates to: NVAKSHLLLSEVAHTWHRLDSGV*EISRSD
Trigger: GTCACTCCTAGATATCTCCAACACACCAGAGTCTAG...TCTATGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR CAA 90 bp GTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATAGAAAATTGCAACTTGCCACCTaGCTGACTGCTTTGAAGGAA +
Preference number: 5 (lower is better)
Translates to: VAKSHLLLSEVAHTWHRKLQLAT*LTALKE
Trigger: TTCCTTCAAAGCAGTCAGCAAGGTGGCAAGTTGCAA...TTTTCTATGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR CAA 90 bp AGGGTTGCAAAGCTACTAATATCAGCTGATAGCAACTTAAATTATTGGCCTTTGGAGGAAGAGAGTTACTaGTTCTCCTCTGTCACAGGG +
Preference number: 5 (lower is better)
Translates to: RVAKLLISADSNLNYWPLEEESY*FSSVTG
Trigger: CCCTGTGACAGAGGAGAACAAGTAACTCTCTTCCTC...CAAAGGCCAATAATTTAAGTTGCTATCAGCTGATATTAGTAGCTTTGCAACCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR CAA 90 bp GAAAGGAGTGGTTATTTAAATACTTCAAACTGCACATGTGAAACAGACCCACTAGAGGAAGAGAGTTACTaGTTCTCCTCTGTCACAGGG +
Preference number: 5 (lower is better)
Translates to: ERSGYLNTSNCTCETDPLEEESY*FSSVTG
Trigger: CCCTGTGACAGAGGAGAACAAGTAACTCTCTTCCTC...TAGTGGGTCTGTTTCACATGTGCAGTTTGAAGTATTTAAATAACCACTCCTTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR CAA 90 bp ACAAGGGAGGGAGAAGGGATACCATTAAACTTCATGAGGCTTGTTTCCATTAGTAAAGTGCCAATAACCTaGTGCCGTTTTCTTGCTATC +
Preference number: 5 (lower is better)
Translates to: TREGEGIPLNFMRLVSISKVPIT*CRFLAI
Trigger: GATAGCAAGAAAACGGCACAAGGTTATTGGCACTTT...ACTAATGGAAACAAGCCTCATGAAGTTTAATGGTATCCCTTCTCCCTCCCTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437296.1
CDS-3UTR CAA 90 bp AGGGTTGCAAAGCTACTAATATCAGCTGATAGCAACTTAAATTATTGGCCTTTGCGACGTCGTTTGCGATaGCTGTTAGGGGTATTTAGA +
Preference number: 5 (lower is better)
Translates to: RVAKLLISADSNLNYWPLRRRLR*LLGVFR
Trigger: TCTAAATACCCCTAACAGCAATCGCAAACGACGTCG...CAAAGGCCAATAATTTAAGTTGCTATCAGCTGATATTAGTAGCTTTGCAACCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR CAA 90 bp AATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATAGATTTAAACGACGTCGTTaGCGATTGCTGTTAGGGGTA +
Preference number: 5 (lower is better)
Translates to: NVAKSHLLLSEVAHTWHRFKRRR*RLLLGV
Trigger: TACCCCTAACAGCAATCGCAAACGACGTCGTTTAAA...TCTATGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR CAA 90 bp GTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATAGAAAATTTAAACGACGTCGTTaGCGATTGCTGTTAGGGGTA +
Preference number: 5 (lower is better)
Translates to: VAKSHLLLSEVAHTWHRKFKRRR*RLLLGV
Trigger: TACCCCTAACAGCAATCGCAAACGACGTCGTTTAAA...TTTTCTATGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR CAA 90 bp AATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATAGAACACGTCTGTCTCTCTaGAAAGCTGAGCAAGTGTTT +
Preference number: 5 (lower is better)
Translates to: NVAKSHLLLSEVAHTWHRTRLSL*KAEQVF
Trigger: AAACACTTGCTCAGCTTTCAAGAGAGACAGACGTGT...TCTATGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR CAA 90 bp GAAAGGAGTGGTTATTTAAATACTTCAAACTGCACATGTGAAACAGACCCACTACTAGACTCTGGTGTGTaGGAGATATCTAGGAGTGAC +
Preference number: 5 (lower is better)
Translates to: ERSGYLNTSNCTCETDPLLDSGV*EISRSD
Trigger: GTCACTCCTAGATATCTCCAACACACCAGAGTCTAG...TAGTGGGTCTGTTTCACATGTGCAGTTTGAAGTATTTAAATAACCACTCCTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR CAA 90 bp TTAAAATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATTGCAACTTGCCACCTaGCTGACTGCTTTGAAGGAA +
Preference number: 5 (lower is better)
Translates to: LKCSKESFTTLRSGTYMALQLAT*LTALKE
Trigger: TTCCTTCAAAGCAGTCAGCAAGGTGGCAAGTTGCAA...TGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR CAA 90 bp GAAAGGAGTGGTTATTTAAATACTTCAAACTGCACATGTGAAACAGACCCACTATTGCAACTTGCCACCTaGCTGACTGCTTTGAAGGAA +
Preference number: 5 (lower is better)
Translates to: ERSGYLNTSNCTCETDPLLQLAT*LTALKE
Trigger: TTCCTTCAAAGCAGTCAGCAAGGTGGCAAGTTGCAA...TAGTGGGTCTGTTTCACATGTGCAGTTTGAAGTATTTAAATAACCACTCCTTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR CAA 90 bp AGGGTTGCAAAGCTACTAATATCAGCTGATAGCAACTTAAATTATTGGCCTTTGTTGCAACTTGCCACCTaGCTGACTGCTTTGAAGGAA +
Preference number: 5 (lower is better)
Translates to: RVAKLLISADSNLNYWPLLQLAT*LTALKE
Trigger: TTCCTTCAAAGCAGTCAGCAAGGTGGCAAGTTGCAA...CAAAGGCCAATAATTTAAGTTGCTATCAGCTGATATTAGTAGCTTTGCAACCCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR CAA 90 bp AATTCATTCATGGATACTATACAAATAGATTCACAGCAGTATTTGGCACCCGCCGCTCACCTAGAGAAATaGTTTCAACCCGCTGTACTA +
Preference number: 5 (lower is better)
Translates to: NSFMDTIQIDSQQYLAPAAHLEK*FQPAVL
Trigger: TAGTACAGCGGGTTGAAACAATTTCTCTAGGTGAGC...GGCGGGTGCCAAATACTGCTGTGAATCTATTTGTATAGTATCCATGAATGAATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR CAA 90 bp TCTATCAGGGTTGCAAAGCTACTAATATCAGCTGATAGCAACTTAAATTATTGGGAGGAAGAGAGTTACTaGTTCTCCTCTGTCACAGGG +
Preference number: 5 (lower is better)
Translates to: SIRVAKLLISADSNLNYWEEESY*FSSVTG
Trigger: CCCTGTGACAGAGGAGAACAAGTAACTCTCTTCCTC...CCAATAATTTAAGTTGCTATCAGCTGATATTAGTAGCTTTGCAACCCTGATAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR CAA 90 bp GTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATAGAAAAGATTCACAGCAGTATTaGGCACCCGCCCATAAAATT +
Preference number: 5 (lower is better)
Translates to: VAKSHLLLSEVAHTWHRKDSQQY*APAHKI
Trigger: AATTTTATGGGCGGGTGCCAAATACTGCTGTGAATC...TTTTCTATGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR CAA 90 bp TTAAAATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCAAATCAAAAATACCATTaGAAAGGCCGGACGCGGTGG +
Preference number: 5 (lower is better)
Translates to: LKCSKESFTTLRSGTYMANQKYH*KGRTRW
Trigger: CCACCGCGTCCGGCCTTTCAAATGGTATTTTTGATT...TGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATTTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000417960.5
ENST00000540509.5
CDS-3UTR CAA 90 bp AATTCATTCATGGATACTATACAAATAGATTCACAGCAGTATTTGGCACCCGCCCTAGATTCATCATACTaGTACAATACAACGGGCGAC +
Preference number: 5 (lower is better)
Translates to: NSFMDTIQIDSQQYLAPALDSSY*YNTTGD
Trigger: GTCGCCCGTTGTATTGTACAAGTATGATGAATCTAG...GGCGGGTGCCAAATACTGCTGTGAATCTATTTGTATAGTATCCATGAATGAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR CAA 90 bp GTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATAGAAAACTAGATTCATCATACTaGTACAATACAACGGGCGAC +
Preference number: 5 (lower is better)
Translates to: VAKSHLLLSEVAHTWHRKLDSSY*YNTTGD
Trigger: GTCGCCCGTTGTATTGTACAAGTATGATGAATCTAG...TTTTCTATGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR CAA 90 bp AATTCATTCATGGATACTATACAAATAGATTCACAGCAGTATTTGGCACCCGCCATTGACACTGATTTCTaGAGCTCAGGAGTATTTGCC +
Preference number: 5 (lower is better)
Translates to: NSFMDTIQIDSQQYLAPAIDTDF*SSGVFA
Trigger: GGCAAATACTCCTGAGCTCAAGAAATCAGTGTCAAT...GGCGGGTGCCAAATACTGCTGTGAATCTATTTGTATAGTATCCATGAATGAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR CAA 90 bp TCTATCAGGGTTGCAAAGCTACTAATATCAGCTGATAGCAACTTAAATTATTGGCGACGTCGTTTGCGATaGCTGTTAGGGGTATTTAGA +
Preference number: 5 (lower is better)
Translates to: SIRVAKLLISADSNLNYWRRRLR*LLGVFR
Trigger: TCTAAATACCCCTAACAGCAATCGCAAACGACGTCG...CCAATAATTTAAGTTGCTATCAGCTGATATTAGTAGCTTTGCAACCCTGATAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR CAA 90 bp AGGGTTGCAAAGCTACTAATATCAGCTGATAGCAACTTAAATTATTGGCCTTTGTTTAAACGACGTCGTTaGCGATTGCTGTTAGGGGTA +
Preference number: 5 (lower is better)
Translates to: RVAKLLISADSNLNYWPLFKRRR*RLLLGV
Trigger: TACCCCTAACAGCAATCGCAAACGACGTCGTTTAAA...CAAAGGCCAATAATTTAAGTTGCTATCAGCTGATATTAGTAGCTTTGCAACCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR CAA 90 bp TTAAAATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATTTAAACGACGTCGTTaGCGATTGCTGTTAGGGGTA +
Preference number: 5 (lower is better)
Translates to: LKCSKESFTTLRSGTYMAFKRRR*RLLLGV
Trigger: TACCCCTAACAGCAATCGCAAACGACGTCGTTTAAA...TGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR CAA 90 bp GAAAGGAGTGGTTATTTAAATACTTCAAACTGCACATGTGAAACAGACCCACTAACACGTCTGTCTCTCTaGAAAGCTGAGCAAGTGTTT +
Preference number: 5 (lower is better)
Translates to: ERSGYLNTSNCTCETDPLTRLSL*KAEQVF
Trigger: AAACACTTGCTCAGCTTTCAAGAGAGACAGACGTGT...TAGTGGGTCTGTTTCACATGTGCAGTTTGAAGTATTTAAATAACCACTCCTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR CAA 90 bp AGGGTTGCAAAGCTACTAATATCAGCTGATAGCAACTTAAATTATTGGCCTTTGACACGTCTGTCTCTCTaGAAAGCTGAGCAAGTGTTT +
Preference number: 5 (lower is better)
Translates to: RVAKLLISADSNLNYWPLTRLSL*KAEQVF
Trigger: AAACACTTGCTCAGCTTTCAAGAGAGACAGACGTGT...CAAAGGCCAATAATTTAAGTTGCTATCAGCTGATATTAGTAGCTTTGCAACCCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR CAA 90 bp TTAAAATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCAACACGTCTGTCTCTCTaGAAAGCTGAGCAAGTGTTT +
Preference number: 5 (lower is better)
Translates to: LKCSKESFTTLRSGTYMATRLSL*KAEQVF
Trigger: AAACACTTGCTCAGCTTTCAAGAGAGACAGACGTGT...TGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATTTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR CAA 90 bp TCTATCAGGGTTGCAAAGCTACTAATATCAGCTGATAGCAACTTAAATTATTGGCTAGACTCTGGTGTGTaGGAGATATCTAGGAGTGAC +
Preference number: 5 (lower is better)
Translates to: SIRVAKLLISADSNLNYWLDSGV*EISRSD
Trigger: GTCACTCCTAGATATCTCCAACACACCAGAGTCTAG...CCAATAATTTAAGTTGCTATCAGCTGATATTAGTAGCTTTGCAACCCTGATAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR CAA 90 bp GAAAGGAGTGGTTATTTAAATACTTCAAACTGCACATGTGAAACAGACCCACTAGCTCACCTAGAGAAATaGTTTCAACCCGCTGTACTA +
Preference number: 5 (lower is better)
Translates to: ERSGYLNTSNCTCETDPLAHLEK*FQPAVL
Trigger: TAGTACAGCGGGTTGAAACAATTTCTCTAGGTGAGC...TAGTGGGTCTGTTTCACATGTGCAGTTTGAAGTATTTAAATAACCACTCCTTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR CAA 90 bp AATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATAGAAAAGTGCCAATAACCTaGTGCCGTTTTCTTGCTATC +
Preference number: 5 (lower is better)
Translates to: NVAKSHLLLSEVAHTWHRKVPIT*CRFLAI
Trigger: GATAGCAAGAAAACGGCACAAGGTTATTGGCACTTT...TCTATGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR CAA 90 bp AATTCATTCATGGATACTATACAAATAGATTCACAGCAGTATTTGGCACCCGCCAAAGTGCCAATAACCTaGTGCCGTTTTCTTGCTATC +
Preference number: 5 (lower is better)
Translates to: NSFMDTIQIDSQQYLAPAKVPIT*CRFLAI
Trigger: GATAGCAAGAAAACGGCACAAGGTTATTGGCACTTT...GGCGGGTGCCAAATACTGCTGTGAATCTATTTGTATAGTATCCATGAATGAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR CAA 90 bp AATTCATTCATGGATACTATACAAATAGATTCACAGCAGTATTTGGCACCCGCCATTACATGCTTATCATaGCTGGAAGGACTTCTTCCC +
Preference number: 5 (lower is better)
Translates to: NSFMDTIQIDSQQYLAPAITCLS*LEGLLP
Trigger: GGGAAGAAGTCCTTCCAGCAATGATAAGCATGTAAT...GGCGGGTGCCAAATACTGCTGTGAATCTATTTGTATAGTATCCATGAATGAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR CAA 90 bp AATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATAGAGAACCAATATCACTCTaGTTTCAATCTGAGGCATCT +
Preference number: 5 (lower is better)
Translates to: NVAKSHLLLSEVAHTWHREPISL*FQSEAS
Trigger: AGATGCCTCAGATTGAAACAAGAGTGATATTGGTTC...TCTATGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR CAA 90 bp GAAAGGAGTGGTTATTTAAATACTTCAAACTGCACATGTGAAACAGACCCACTACTAGATTCATCATACTaGTACAATACAACGGGCGAC +
Preference number: 5 (lower is better)
Translates to: ERSGYLNTSNCTCETDPLLDSSY*YNTTGD
Trigger: GTCGCCCGTTGTATTGTACAAGTATGATGAATCTAG...TAGTGGGTCTGTTTCACATGTGCAGTTTGAAGTATTTAAATAACCACTCCTTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR CAA 90 bp GTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATAGAAAACCTGAATTTTTCTCCTaGTGTACAATTTGCCACCAA +
Preference number: 5 (lower is better)
Translates to: VAKSHLLLSEVAHTWHRKPEFFS*CTICHQ
Trigger: TTGGTGGCAAATTGTACACAAGGAGAAAAATTCAGG...TTTTCTATGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR CAA 90 bp AATTCATTCATGGATACTATACAAATAGATTCACAGCAGTATTTGGCACCCGCCCCTGAATTTTTCTCCTaGTGTACAATTTGCCACCAA +
Preference number: 5 (lower is better)
Translates to: NSFMDTIQIDSQQYLAPAPEFFS*CTICHQ
Trigger: TTGGTGGCAAATTGTACACAAGGAGAAAAATTCAGG...GGCGGGTGCCAAATACTGCTGTGAATCTATTTGTATAGTATCCATGAATGAATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR CAA 90 bp TTAAAATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATCCCCAGAACCACTCTaGCTTGACAACATAAAGTTT +
Preference number: 5 (lower is better)
Translates to: LKCSKESFTTLRSGTYMASPEPL*LDNIKF
Trigger: AAACTTTATGTTGTCAAGCAAGAGTGGTTCTGGGGA...TGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR CAA 90 bp TTAAAATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCAATTGACACTGATTTCTaGAGCTCAGGAGTATTTGCC +
Preference number: 5 (lower is better)
Translates to: LKCSKESFTTLRSGTYMAIDTDF*SSGVFA
Trigger: GGCAAATACTCCTGAGCTCAAGAAATCAGTGTCAAT...TGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR CAA 90 bp TTAAAATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATTTGATAAAGCTCTTTaGCAACTTGCCACCTTGCTG +
Preference number: 5 (lower is better)
Translates to: LKCSKESFTTLRSGTYMAFDKAL*QLATLL
Trigger: CAGCAAGGTGGCAAGTTGCAAAAGAGCTTTATCAAA...TGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR CAA 90 bp GAAAGGAGTGGTTATTTAAATACTTCAAACTGCACATGTGAAACAGACCCACTATTTGATAAAGCTCTTTaGCAACTTGCCACCTTGCTG +
Preference number: 5 (lower is better)
Translates to: ERSGYLNTSNCTCETDPLFDKAL*QLATLL
Trigger: CAGCAAGGTGGCAAGTTGCAAAAGAGCTTTATCAAA...TAGTGGGTCTGTTTCACATGTGCAGTTTGAAGTATTTAAATAACCACTCCTTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR CAA 90 bp AATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATAGAATGTCACCAATGCTTTaGCTCTCATCCCAATTAACT +
Preference number: 5 (lower is better)
Translates to: NVAKSHLLLSEVAHTWHRMSPML*LSSQLT
Trigger: AGTTAATTGGGATGAGAGCAAAAGCATTGGTGACAT...TCTATGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR CAA 90 bp AATTCATTCATGGATACTATACAAATAGATTCACAGCAGTATTTGGCACCCGCCATGTCACCAATGCTTTaGCTCTCATCCCAATTAACT +
Preference number: 5 (lower is better)
Translates to: NSFMDTIQIDSQQYLAPAMSPML*LSSQLT
Trigger: AGTTAATTGGGATGAGAGCAAAAGCATTGGTGACAT...GGCGGGTGCCAAATACTGCTGTGAATCTATTTGTATAGTATCCATGAATGAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR CAA 90 bp GTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATAGAAAAATGTCACCAATGCTTTaGCTCTCATCCCAATTAACT +
Preference number: 5 (lower is better)
Translates to: VAKSHLLLSEVAHTWHRKMSPML*LSSQLT
Trigger: AGTTAATTGGGATGAGAGCAAAAGCATTGGTGACAT...TTTTCTATGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR CAA 90 bp TCTATCAGGGTTGCAAAGCTACTAATATCAGCTGATAGCAACTTAAATTATTGGGCTCACCTAGAGAAATaGTTTCAACCCGCTGTACTA +
Preference number: 5 (lower is better)
Translates to: SIRVAKLLISADSNLNYWAHLEK*FQPAVL
Trigger: TAGTACAGCGGGTTGAAACAATTTCTCTAGGTGAGC...CCAATAATTTAAGTTGCTATCAGCTGATATTAGTAGCTTTGCAACCCTGATAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR CAA 90 bp AATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATAGAATCTCTAGGCAATCATaGAAGAGGAAGAGAGTTACT +
Preference number: 5 (lower is better)
Translates to: NVAKSHLLLSEVAHTWHRISRQS*KRKRVT
Trigger: AGTAACTCTCTTCCTCTTCAATGATTGCCTAGAGAT...TCTATGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR CAA 90 bp GTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATAGAAAAATCTCTAGGCAATCATaGAAGAGGAAGAGAGTTACT +
Preference number: 5 (lower is better)
Translates to: VAKSHLLLSEVAHTWHRKISRQS*KRKRVT
Trigger: AGTAACTCTCTTCCTCTTCAATGATTGCCTAGAGAT...TTTTCTATGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR CAA 90 bp AATTCATTCATGGATACTATACAAATAGATTCACAGCAGTATTTGGCACCCGCCATCTCTAGGCAATCATaGAAGAGGAAGAGAGTTACT +
Preference number: 5 (lower is better)
Translates to: NSFMDTIQIDSQQYLAPAISRQS*KRKRVT
Trigger: AGTAACTCTCTTCCTCTTCAATGATTGCCTAGAGAT...GGCGGGTGCCAAATACTGCTGTGAATCTATTTGTATAGTATCCATGAATGAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR CAA 90 bp TTAAAATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCAAAAGTGCCAATAACCTaGTGCCGTTTTCTTGCTATC +
Preference number: 5 (lower is better)
Translates to: LKCSKESFTTLRSGTYMAKVPIT*CRFLAI
Trigger: GATAGCAAGAAAACGGCACAAGGTTATTGGCACTTT...TGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR CAA 90 bp AGGGTTGCAAAGCTACTAATATCAGCTGATAGCAACTTAAATTATTGGCCTTTGAAAGTGCCAATAACCTaGTGCCGTTTTCTTGCTATC +
Preference number: 5 (lower is better)
Translates to: RVAKLLISADSNLNYWPLKVPIT*CRFLAI
Trigger: GATAGCAAGAAAACGGCACAAGGTTATTGGCACTTT...CAAAGGCCAATAATTTAAGTTGCTATCAGCTGATATTAGTAGCTTTGCAACCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR CAA 90 bp TTAAAATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCAATTACATGCTTATCATaGCTGGAAGGACTTCTTCCC +
Preference number: 5 (lower is better)
Translates to: LKCSKESFTTLRSGTYMAITCLS*LEGLLP
Trigger: GGGAAGAAGTCCTTCCAGCAATGATAAGCATGTAAT...TGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATTTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR CAA 90 bp GAAAGGAGTGGTTATTTAAATACTTCAAACTGCACATGTGAAACAGACCCACTAATTACATGCTTATCATaGCTGGAAGGACTTCTTCCC +
Preference number: 5 (lower is better)
Translates to: ERSGYLNTSNCTCETDPLITCLS*LEGLLP
Trigger: GGGAAGAAGTCCTTCCAGCAATGATAAGCATGTAAT...TAGTGGGTCTGTTTCACATGTGCAGTTTGAAGTATTTAAATAACCACTCCTTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR CAA 90 bp GAAAGGAGTGGTTATTTAAATACTTCAAACTGCACATGTGAAACAGACCCACTAAGAATGACGTACAGATaGAAACCAGGAGTACTGAGA +
Preference number: 5 (lower is better)
Translates to: ERSGYLNTSNCTCETDPLRMTYR*KPGVLR
Trigger: TCTCAGTACTCCTGGTTTCAATCTGTACGTCATTCT...TAGTGGGTCTGTTTCACATGTGCAGTTTGAAGTATTTAAATAACCACTCCTTTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000437296.1
CDS CCA 90 bp GTCTTCAAGATCATCCTTTATCTTAGTGTGTACATCAAAGATATCTaGGATGCTACCAAAAATAGTCTTAATCTCCTCTGGTGCAAGGAT +
Preference number: 5 (lower is better)
Translates to: VFKIILYLSVYIKDI*DATKNSLNLLWCKD
Trigger: ATCCTTGCACCAGAGGAGATTAAGACTATTTTTGGTAGCATCCCAGATATCTTTGATGTACACACTAAGATAAAGGATGATCTTGAAGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000441497.6
ENST00000444250.1
ENST00000540509.5
CDS-3UTR CAA 90 bp AGGGTTGCAAAGCTACTAATATCAGCTGATAGCAACTTAAATTATTGGCCTTTGGAACCAATATCACTCTaGTTTCAATCTGAGGCATCT +
Preference number: 5 (lower is better)
Translates to: RVAKLLISADSNLNYWPLEPISL*FQSEAS
Trigger: AGATGCCTCAGATTGAAACAAGAGTGATATTGGTTC...CAAAGGCCAATAATTTAAGTTGCTATCAGCTGATATTAGTAGCTTTGCAACCCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR CAA 90 bp GAAAGGAGTGGTTATTTAAATACTTCAAACTGCACATGTGAAACAGACCCACTACCTGAATTTTTCTCCTaGTGTACAATTTGCCACCAA +
Preference number: 5 (lower is better)
Translates to: ERSGYLNTSNCTCETDPLPEFFS*CTICHQ
Trigger: TTGGTGGCAAATTGTACACAAGGAGAAAAATTCAGG...TAGTGGGTCTGTTTCACATGTGCAGTTTGAAGTATTTAAATAACCACTCCTTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR CAA 90 bp AGGGTTGCAAAGCTACTAATATCAGCTGATAGCAACTTAAATTATTGGCCTTTGCCTGAATTTTTCTCCTaGTGTACAATTTGCCACCAA +
Preference number: 5 (lower is better)
Translates to: RVAKLLISADSNLNYWPLPEFFS*CTICHQ
Trigger: TTGGTGGCAAATTGTACACAAGGAGAAAAATTCAGG...CAAAGGCCAATAATTTAAGTTGCTATCAGCTGATATTAGTAGCTTTGCAACCCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR CAA 90 bp TCTATCAGGGTTGCAAAGCTACTAATATCAGCTGATAGCAACTTAAATTATTGGTCCCCAGAACCACTCTaGCTTGACAACATAAAGTTT +
Preference number: 5 (lower is better)
Translates to: SIRVAKLLISADSNLNYWSPEPL*LDNIKF
Trigger: AAACTTTATGTTGTCAAGCAAGAGTGGTTCTGGGGA...CCAATAATTTAAGTTGCTATCAGCTGATATTAGTAGCTTTGCAACCCTGATAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR CAA 90 bp TCTATCAGGGTTGCAAAGCTACTAATATCAGCTGATAGCAACTTAAATTATTGGTTTGATAAAGCTCTTTaGCAACTTGCCACCTTGCTG +
Preference number: 5 (lower is better)
Translates to: SIRVAKLLISADSNLNYWFDKAL*QLATLL
Trigger: CAGCAAGGTGGCAAGTTGCAAAAGAGCTTTATCAAA...CCAATAATTTAAGTTGCTATCAGCTGATATTAGTAGCTTTGCAACCCTGATAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR CAA 90 bp AATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATAGAACATTCTGGTTTTGCTaGGTTTATCTTGAGAAAAGC +
Preference number: 5 (lower is better)
Translates to: NVAKSHLLLSEVAHTWHRTFWFC*VYLEKS
Trigger: GCTTTTCTCAAGATAAACCAAGCAAAACCAGAATGT...TCTATGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR CAA 90 bp AATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATAGATTAGCCAGTTTTCTTTaGGAAGTTCATCTGATGTCA +
Preference number: 5 (lower is better)
Translates to: NVAKSHLLLSEVAHTWHRLASFL*EVHLMS
Trigger: TGACATCAGATGAACTTCCAAAAGAAAACTGGCTAA...TCTATGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR CAA 90 bp AATTCATTCATGGATACTATACAAATAGATTCACAGCAGTATTTGGCACCCGCCTTAGCCAGTTTTCTTTaGGAAGTTCATCTGATGTCA +
Preference number: 5 (lower is better)
Translates to: NSFMDTIQIDSQQYLAPALASFL*EVHLMS
Trigger: TGACATCAGATGAACTTCCAAAAGAAAACTGGCTAA...GGCGGGTGCCAAATACTGCTGTGAATCTATTTGTATAGTATCCATGAATGAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR CAA 90 bp TCTATCAGGGTTGCAAAGCTACTAATATCAGCTGATAGCAACTTAAATTATTGGATTACATGCTTATCATaGCTGGAAGGACTTCTTCCC +
Preference number: 5 (lower is better)
Translates to: SIRVAKLLISADSNLNYWITCLS*LEGLLP
Trigger: GGGAAGAAGTCCTTCCAGCAATGATAAGCATGTAAT...CCAATAATTTAAGTTGCTATCAGCTGATATTAGTAGCTTTGCAACCCTGATAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR CAA 90 bp GTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATAGAAAAGACCACAATAAAAAGTaGAACATGCGCATATCTATG +
Preference number: 5 (lower is better)
Translates to: VAKSHLLLSEVAHTWHRKDHNKK*NMRISM
Trigger: CATAGATATGCGCATGTTCAACTTTTTATTGTGGTC...TTTTCTATGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR CAA 90 bp TTAAAATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCAACATTCTGGTTTTGCTaGGTTTATCTTGAGAAAAGC +
Preference number: 5 (lower is better)
Translates to: LKCSKESFTTLRSGTYMATFWFC*VYLEKS
Trigger: GCTTTTCTCAAGATAAACCAAGCAAAACCAGAATGT...TGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATTTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR CAA 90 bp TTAAAATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCATTAGCCAGTTTTCTTTaGGAAGTTCATCTGATGTCA +
Preference number: 5 (lower is better)
Translates to: LKCSKESFTTLRSGTYMALASFL*EVHLMS
Trigger: TGACATCAGATGAACTTCCAAAAGAAAACTGGCTAA...TGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATTTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR CAA 90 bp GAAAGGAGTGGTTATTTAAATACTTCAAACTGCACATGTGAAACAGACCCACTAGACCACAATAAAAAGTaGAACATGCGCATATCTATG +
Preference number: 5 (lower is better)
Translates to: ERSGYLNTSNCTCETDPLDHNKK*NMRISM
Trigger: CATAGATATGCGCATGTTCAACTTTTTATTGTGGTC...TAGTGGGTCTGTTTCACATGTGCAGTTTGAAGTATTTAAATAACCACTCCTTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR CAA 90 bp AGGGTTGCAAAGCTACTAATATCAGCTGATAGCAACTTAAATTATTGGCCTTTGGACCACAATAAAAAGTaGAACATGCGCATATCTATG +
Preference number: 5 (lower is better)
Translates to: RVAKLLISADSNLNYWPLDHNKK*NMRISM
Trigger: CATAGATATGCGCATGTTCAACTTTTTATTGTGGTC...CAAAGGCCAATAATTTAAGTTGCTATCAGCTGATATTAGTAGCTTTGCAACCCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS-3UTR CAA 90 bp TTAAAATGTAGCAAAGAGTCATTTACTACTCTCAGAAGTGGCACATACATGGCAGTAAATCCAATTACATaGCTTGTGGAAACAGAATGG +
Preference number: 5 (lower is better)
Translates to: LKCSKESFTTLRSGTYMAVNPIT*LVETEW
Trigger: CCATTCTGTTTCCACAAGCAATGTAATTGGATTTAC...TGCCATGTATGTGCCACTTCTGAGAGTAGTAAATGACTCTTTGCTACATTTTAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000437296.1
CDS-3UTR CAA 90 bp TCTATCAGGGTTGCAAAGCTACTAATATCAGCTGATAGCAACTTAAATTATTGGACATTCTGGTTTTGCTaGGTTTATCTTGAGAAAAGC +
Preference number: 5 (lower is better)
Translates to: SIRVAKLLISADSNLNYWTFWFC*VYLEKS
Trigger: GCTTTTCTCAAGATAAACCAAGCAAAACCAGAATGT...CCAATAATTTAAGTTGCTATCAGCTGATATTAGTAGCTTTGCAACCCTGATAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000540509.5
CDS-3UTR CAA 90 bp TCTATCAGGGTTGCAAAGCTACTAATATCAGCTGATAGCAACTTAAATTATTGGGACCACAATAAAAAGTaGAACATGCGCATATCTATG +
Preference number: 5 (lower is better)
Translates to: SIRVAKLLISADSNLNYWDHNKK*NMRISM
Trigger: CATAGATATGCGCATGTTCAACTTTTTATTGTGGTC...CCAATAATTTAAGTTGCTATCAGCTGATATTAGTAGCTTTGCAACCCTGATAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000540509.5
CDS CCA 72 bp GCTTCGGTCTCCCACTCCGCGTCAGGGCCCGGCTGCTaGGGGTGGGGTGCGGCGAGGGAGTTCCCGGATCCG +
Preference number: 6 (lower is better)
Translates to: ASVSHSASGPGC*GWGAAREFPDP
Trigger: CGGATCCGGGAACTCCCTCGCCGCACCCCACCCCCAGCAGCCGGGCCCTGACGCGGAGTGGGAGACCGAAGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000366254.2
ENST00000415665.5
CDS TCA 72 bp AAGCTGCTCTCTCTAAGAGCCATGCCGATTGGCGCGTaGTGTCAACCTCTTTCCCATAGGCAGGAGTCTCCA +
Preference number: 6 (lower is better)
Translates to: KLLSLRAMPIGA*CQPLSHRQESP
Trigger: TGGAGACTCCTGCCTATGGGAAAGAGGTTGACATCACGCGCCAATCGGCATGGCTCTTAGAGAGAGCAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000232458.9
CDS CCA 72 bp ACTCTGGTGTGTTGGAGATATCTAGGAGTGACCCTATaGAAAGGGAATGCTCAGCTGATGGGCGCTTACGGG +
Preference number: 6 (lower is better)
Translates to: TLVCWRYLGVTL*KGNAQLMGAYG
Trigger: CCCGTAAGCGCCCATCAGCTGAGCATTCCCTTTCCATAGGGTCACTCCTAGATATCTCCAACACACCAGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000441497.6
ENST00000540509.5
CDS TCA 72 bp ATGCTTATCATTGCTGGAAGGACTTCTTCCCTCCACTaGGCCGTGGGATGTCATAAGAGCCCTTCGAAGAGC +
Preference number: 6 (lower is better)
Translates to: MLIIAGRTSSLH*AVGCHKSPSKS
Trigger: GCTCTTCGAAGGGCTCTTATGACATCCCACGGCTCAGTGGAGGGAAGAAGTCCTTCCAGCAATGATAAGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000441497.6
ENST00000486027.1
ENST00000540509.5
CDS GCA 72 bp TTGGAGATATCTAGGAGTGACCCTATGGAAAGGGAATaGTCAGCTGATGGGCGCTTACGGGGTGGAAATGGT +
Preference number: 6 (lower is better)
Translates to: LEISRSDPMERE*SADGRLRGGNG
Trigger: ACCATTTCCACCCCGTAAGCGCCCATCAGCTGAGCATTCCCTTTCCATAGGGTCACTCCTAGATATCTCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000441497.6
ENST00000540509.5
CDS TCA 72 bp ATATGCTTAAGAGAAGCTGGGGGTCGGGTTTGGCCATaGGGACTCCTAAAAGTGCCAATAACCTTGTGCCGT +
Preference number: 6 (lower is better)
Translates to: ICLREAGGRVWP*GLLKVPITLCR
Trigger: ACGGCACAAGGTTATTGGCACTTTTAGGAGTCCTCATGGCCAAACCCGACCCCCAGCTTCTCTTAAGCATAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000441497.6
ENST00000460860.1
ENST00000540509.5
CDS CCA 72 bp TCATTGCTGGAAGGACTTCTTCCCTCCACTGAGCCGTaGGATGTCATAAGAGCCCTTCGAAGAGCTCTTTTT +
Preference number: 6 (lower is better)
Translates to: SLLEGLLPSTEP*DVIRALRRALF
Trigger: AAAAAGAGCTCTTCGAAGGGCTCTTATGACATCCCACGGCTCAGTGGAGGGAAGAAGTCCTTCCAGCAATGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000441497.6
ENST00000486027.1
ENST00000540509.5
CDS CAA 72 bp GTTCTCCTCTGTCACAGGGGTGCTCACCTAGAGAAATaGTTTCAACCCGCTGTACTAAGCTTCGGTGAGAAG +
Preference number: 6 (lower is better)
Translates to: VLLCHRGAHLEK*FQPAVLSFGEK
Trigger: CTTCTCACCGAAGCTTAGTACAGCGGGTTGAAACAATTTCTCTAGGTGAGCACCCCTGTGACAGAGGAGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000441497.6
ENST00000460860.1
ENST00000540509.5
CDS CAA 90 bp CTGATGGGCGCTTACGGGGTGGAAATGGTGACACGTCTGTCTCTCTaGAAAGCTGAGCAAGTGTTTCTTTTAAACGACGTCGTTTGCGAT +
Preference number: 6 (lower is better)
Translates to: LMGAYGVEMVTRLSL*KAEQVFLLNDVVCD
Trigger: ATCGCAAACGACGTCGTTTAAAAGAAACACTTGCTCAGCTTTCAAGAGAGACAGACGTGTCACCATTTCCACCCCGTAAGCGCCCATCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000441497.6
ENST00000540509.5
CDS GCA 72 bp TCTGATGTCATCTGGAAACTGAGTAGCACATTTGCCTaGTCTGTTGGTGGCCTCACAAGCAAGGCAAAAGCA +
Preference number: 6 (lower is better)
Translates to: SDVIWKLSSTFA*SVGGLTSKAKA
Trigger: TGCTTTTGCCTTGCTTGTGAGGCCACCAACAGAGCAGGCAAATGTGCTACTCAGTTTCCAGATGACATCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000441497.6
ENST00000486027.1
ENST00000540509.5
CDS CAA 72 bp GATGTGCTAGAAAGACGACTCATTACATGCTTATCATaGCTGGAAGGACTTCTTCCCTCCACTGAGCCGTGG +
Preference number: 6 (lower is better)
Translates to: DVLERRLITCLS*LEGLLPSTEPW
Trigger: CCACGGCTCAGTGGAGGGAAGAAGTCCTTCCAGCAATGATAAGCATGTAATGAGTCGTCTTTCTAGCACATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000441497.6
ENST00000486027.1
ENST00000540509.5
CDS GCA 72 bp TGGGATGCTACCAAAAATAGTCTTAATCTCCTCTGGTaGAAGGATAGGTCCACCACGTTGTCCTTCCTCTTC +
Preference number: 6 (lower is better)
Translates to: WDATKNSLNLLW*KDRSTTLSFLF
Trigger: GAAGAGGAAGGACAACGTGGTGGACCTATCCTTGCACCAGAGGAGATTAAGACTATTTTTGGTAGCATCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000441497.6
ENST00000444250.1
ENST00000540509.5
CDS CCA 72 bp ATCTGGGATGCTACCAAAAATAGTCTTAATCTCCTCTaGTGCAAGGATAGGTCCACCACGTTGTCCTTCCTC +
Preference number: 6 (lower is better)
Translates to: IWDATKNSLNLL*CKDRSTTLSFL
Trigger: GAGGAAGGACAACGTGGTGGACCTATCCTTGCACCAGAGGAGATTAAGACTATTTTTGGTAGCATCCCAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000441497.6
ENST00000444250.1
ENST00000540509.5
CDS CAA 90 bp GCTAATGATGATGTGCTAGAAAGACGACTCATTACATGCTTATCATaGCTGGAAGGACTTCTTCCCTCCACTGAGCCGTGGGATGTCATA +
Preference number: 6 (lower is better)
Translates to: ANDDVLERRLITCLS*LEGLLPSTEPWDVI
Trigger: TATGACATCCCACGGCTCAGTGGAGGGAAGAAGTCCTTCCAGCAATGATAAGCATGTAATGAGTCGTCTTTCTAGCACATCATCATTAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000441497.6
ENST00000486027.1
ENST00000540509.5
CDS TCA 72 bp GGTGGAAATGGTGACACGTCTGTCTCTCTTGAAAGCTaGGCAAGTGTTTCTTTTAAACGACGTCGTTTGCGA +
Preference number: 6 (lower is better)
Translates to: GGNGDTSVSLES*ASVSFKRRRLR
Trigger: TCGCAAACGACGTCGTTTAAAAGAAACACTTGCTCAGCTTTCAAGAGAGACAGACGTGTCACCATTTCCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000441497.6
ENST00000444250.1
ENST00000540509.5
CDS GCA 72 bp CTCTGTACTGGTCGGATAAGAAGTTCAACAAGGCTCTaGCGTCCACATTCTGGTTTTGCTTGGTTTATCTTG +
Preference number: 6 (lower is better)
Translates to: LCTGRIRSSTRL*RPHSGFAWFIL
Trigger: CAAGATAAACCAAGCAAAACCAGAATGTGGACGGCAGAGCCTTGTTGAACTTCTTATCCGACCAGTACAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000441497.6
ENST00000540509.5
CDS CAA 90 bp GAGTTACTTGTTCTCCTCTGTCACAGGGGTGCTCACCTAGAGAAATaGTTTCAACCCGCTGTACTAAGCTTCGGTGAGAAGATAAAAGAT +
Preference number: 6 (lower is better)
Translates to: ELLVLLCHRGAHLEK*FQPAVLSFGEKIKD
Trigger: ATCTTTTATCTTCTCACCGAAGCTTAGTACAGCGGGTTGAAACAATTTCTCTAGGTGAGCACCCCTGTGACAGAGGAGAACAAGTAACTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000441497.6
ENST00000460860.1
ENST00000540509.5
CDS TCA 72 bp TTTCTTTTGGAAGTTCATCTGATGTCATCTGGAAACTaGGTAGCACATTTGCCTGCTCTGTTGGTGGCCTCA +
Preference number: 6 (lower is better)
Translates to: FLLEVHLMSSGN*VAHLPALLVAS
Trigger: TGAGGCCACCAACAGAGCAGGCAAATGTGCTACTCAGTTTCCAGATGACATCAGATGAACTTCCAAAAGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000441497.6
ENST00000486027.1
ENST00000540509.5
CDS GCA 72 bp GCTAATGATGATGTGCTAGAAAGACGACTCATTACATaGTTATCATTGCTGGAAGGACTTCTTCCCTCCACT +
Preference number: 6 (lower is better)
Translates to: ANDDVLERRLIT*LSLLEGLLPST
Trigger: AGTGGAGGGAAGAAGTCCTTCCAGCAATGATAAGCATGTAATGAGTCGTCTTTCTAGCACATCATCATTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000437296.1
ENST00000441497.6
ENST00000486027.1
ENST00000540509.5
CDS TCA 72 bp AGAGAAATTGTTTCAACCCGCTGTACTAAGCTTCGGTaGGAAGATAAAAGATTAGCTGGGCATCCATCTACT +
Preference number: 6 (lower is better)
Translates to: REIVSTRCTKLR*EDKRLAGHPST
Trigger: AGTAGATGGATGCCCAGCTAATCTTTTATCTTCTCACCGAAGCTTAGTACAGCGGGTTGAAACAATTTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000441497.6
ENST00000540509.5
CDS TCA 72 bp TTTGAATTAAAGTCTTTTCGAATAACTCCACCCATGTaGTGGACCAATGTCACCAACCTGACTAGTTCTTCT +
Preference number: 6 (lower is better)
Translates to: FELKSFRITPPM*WTNVTNLTSSS
Trigger: AGAAGAACTAGTCAGGTTGGTGACATTGGTCCATCACATGGGTGGAGTTATTCGAAAAGACTTTAATTCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000428567.5
ENST00000441497.6
ENST00000540509.5
CDS GCA 72 bp AGGAACTTTAAATTCATTTCTAAAGTCATCAACTGCTaGATAGAAATCCTGTTCATTCCGCCTTTCCCAAGC +
Preference number: 6 (lower is better)
Translates to: RNFKFISKVINC*IEILFIPPFPS
Trigger: GCTTGGGAAAGGCGGAATGAACAGGATTTCTATGCAGCAGTTGATGACTTTAGAAATGAATTTAAAGTTCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000441497.6
ENST00000540509.5
CDS TCA 72 bp CCAGAACCACTCTTGCTTGACAACATAAAGTTTCTTTaGAGGTTCAAAGGGAAGATCTTTTACTATATTCTC +
Preference number: 6 (lower is better)
Translates to: PEPLLLDNIKFL*RFKGKIFYYIL
Trigger: GAGAATATAGTAAAAGATCTTCCCTTTGAACCTTCAAAGAAACTTTATGTTGTCAAGCAAGAGTGGTTCTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000441497.6
ENST00000540509.5
CDS GCA 72 bp GATCTTTTACTATATTCTCTTCAACTACAAGGTGAGTaGATCTTTCATCTCCAAGCGGTAAATATTTACCTC +
Preference number: 6 (lower is better)
Translates to: DLLLYSLQLQGE*IFHLQAVNIYL
Trigger: GAGGTAAATATTTACCGCTTGGAGATGAAAGATGCACTCACCTTGTAGTTGAAGAGAATATAGTAAAAGATC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000441497.6
ENST00000540509.5
CDS CCA 72 bp ATCATCCTTTATCTTAGTGTGTACATCAAAGATATCTaGGATGCTACCAAAAATAGTCTTAATCTCCTCTGG +
Preference number: 6 (lower is better)
Translates to: IILYLSVYIKDI*DATKNSLNLLW
Trigger: CCAGAGGAGATTAAGACTATTTTTGGTAGCATCCCAGATATCTTTGATGTACACACTAAGATAAAGGATGAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000441497.6
ENST00000444250.1
ENST00000540509.5
CDS TCA 72 bp GGAAGATCTTTTACTATATTCTCTTCAACTACAAGGTaGGTGCATCTTTCATCTCCAAGCGGTAAATATTTA +
Preference number: 6 (lower is better)
Translates to: GRSFTIFSSTTR*VHLSSPSGKYL
Trigger: TAAATATTTACCGCTTGGAGATGAAAGATGCACTCACCTTGTAGTTGAAGAGAATATAGTAAAAGATCTTCC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000232458.9
ENST00000392692.8
ENST00000417960.5
ENST00000441497.6
ENST00000540509.5