RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ECPAS (Homo sapiens)

Ensembl gene IDs: ENSG00000136813

Ensembl transcript IDs: ENST00000259335.8, ENST00000338205.9, ENST00000374383.1, ENST00000465499.1, ENST00000602447.5, ENST00000602978.1, ENST00000684092.1

Found 574 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TTAAACACCTGGGTTCTGACTTTGGCACAGGCCTCAGAAAGCCTCTaGGATGACACAGCTTCCTATTTCTTCAGGTGTAAGAGGGAGGTT +
Preference number: 1 (lower is better)
Translates to: LNTWVLTLAQASESL*DDTASYFFRCKREV
Trigger: AACCTCCCTCTTACACCTGAAGAAATAGGAAGCTGTGTCATCTCAGAGGCTTTCTGAGGCCTGTGCCAAAGTCAGAACCCAGGTGTTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
3UTR CCA 90 bp CCTCATCTTGGAAGTTTCTTGGGTAAGCCGGGGTTAGCACTGATTTaGCAGATGGCCATAAAAGAAAGTATCCAGGGCCAGACATTAAAC +
Preference number: 1 (lower is better)
Translates to: PHLGSFLGKPGLALI*QMAIKESIQGQTLN
Trigger: GTTTAATGTCTGGCCCTGGATACTTTCTTTTATGGCCATCTGCCAAATCAGTGCTAACCCCGGCTTACCCAAGAAACTTCCAAGATGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
3UTR-3UTR GCA 90 bp TTTCCTCTTACCCTACACTTTCAGGCAGGGGCATGGGCAACAGAAGGAAGGAGGACAAAGACTGCTGTGTaGCACCCTAAACGTACCTCA +
Preference number: 2 (lower is better)
Translates to: FPLTLHFQAGAWATEGRRTKTAV*HPKRTS
Trigger: TGAGGTACGTTTAGGGTGGCACACAGCAGTCTTTGT...CCTCCTTCCTTCTGTTGCCCATGCCCCTGCCTGAAAGTGTAGGGTAAGAGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
3UTR CAA 90 bp AGACTGCTGTGTGCCACCCTAAACGTACCTCATCTTGGAAGTTTCTaGGGTAAGCCGGGGTTAGCACTGATTTGGCAGATGGCCATAAAA +
Preference number: 2 (lower is better)
Translates to: RLLCATLNVPHLGSF*GKPGLALIWQMAIK
Trigger: TTTTATGGCCATCTGCCAAATCAGTGCTAACCCCGGCTTACCCAAGAAACTTCCAAGATGAGGTACGTTTAGGGTGGCACACAGCAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
3UTR-3UTR TCA 90 bp GTACCTCATCTTGGAAGTTTCTTGGGTAAGCCGGGGTTAGCACTGATTTGGCAGAGAAAGCCTCTGAGATaGCACAGCTTCCTATTTCTT +
Preference number: 2 (lower is better)
Translates to: VPHLGSFLGKPGLALIWQRKPLR*HSFLFL
Trigger: AAGAAATAGGAAGCTGTGTCATCTCAGAGGCTTTCT...CTGCCAAATCAGTGCTAACCCCGGCTTACCCAAGAAACTTCCAAGATGAGGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
3UTR-3UTR CCA 90 bp GGGCATGGGCAACAGAAGGAAGGAGGAAAACCCCTAGTGGCAATGATTTACTTGGGGTTAGCACTGATTTaGCAGATGGCCATAAAAGAA +
Preference number: 2 (lower is better)
Translates to: GHGQQKEGGKPLVAMIYLGLALI*QMAIKE
Trigger: TTCTTTTATGGCCATCTGCCAAATCAGTGCTAACCC...CAAGTAAATCATTGCCACTAGGGGTTTTCCTCCTTCCTTCTGTTGCCCATGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
3UTR-3UTR TCA 90 bp TTTACAACCACCCCTCAAACATCCAAGGTTCCATTAAGCTCACTCAGCCCAGATCACTTCAACCCCCAATaGACATGGCACTTGTTTGTT +
Preference number: 2 (lower is better)
Translates to: FTTTPQTSKVPLSSLSPDHFNPQ*TWHLFV
Trigger: AACAAACAAGTGCCATGTTCATTGGGGGTTGAAGTG...ATCTGGGCTGAGTGAGCTTAATGGAACCTTGGATGTTTGAGGGGTGGTTGTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
3UTR-3UTR TCA 90 bp TGTTTAGCTTCTGGCTTTCAGAAACCCAATGGTAAGGGTCAGTTTAGTTCTGGCCACTTCAACCCCCAATaGACATGGCACTTGTTTGTT +
Preference number: 2 (lower is better)
Translates to: CLASGFQKPNGKGQFSSGHFNPQ*TWHLFV
Trigger: AACAAACAAGTGCCATGTTCATTGGGGGTTGAAGTG...GCCAGAACTAAACTGACCCTTACCATTGGGTTTCTGAAAGCCAGAAGCTAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
3UTR-3UTR GCA 90 bp GTACCTCATCTTGGAAGTTTCTTGGGTAAGCCGGGGTTAGCACTGATTTGGCAGGATTTTTATCCAGCTTaGTCTGCAACTCTGTCTATT +
Preference number: 2 (lower is better)
Translates to: VPHLGSFLGKPGLALIWQDFYPA*SATLSI
Trigger: AATAGACAGAGTTGCAGAGCAAGCTGGATAAAAATC...CTGCCAAATCAGTGCTAACCCCGGCTTACCCAAGAAACTTCCAAGATGAGGTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
3UTR-3UTR TCA 90 bp TTAACGTCAATAAGGATGAGTACTGAATGTAAACCAGTCTTCTGCTCTGGAATCGCCTCAGAAAGCCTCTaGGATGACACAGCTTCCTAT +
Preference number: 2 (lower is better)
Translates to: LTSIRMSTECKPVFCSGIASESL*DDTASY
Trigger: ATAGGAAGCTGTGTCATCTCAGAGGCTTTCTGAGGC...GATTCCAGAGCAGAAGACTGGTTTACATTCAGTACTCATCCTTATTGACGTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
3UTR-3UTR GCA 90 bp TTTACAACCACCCCTCAAACATCCAAGGTTCCATTAAGCTCACTCAGCCCAGATCCAAGGAATGATGCATaGTACAGATTAATCTTTACT +
Preference number: 2 (lower is better)
Translates to: FTTTPQTSKVPLSSLSPDPRNDA*YRLIFT
Trigger: AGTAAAGATTAATCTGTAGCATGCATCATTCCTTGG...ATCTGGGCTGAGTGAGCTTAATGGAACCTTGGATGTTTGAGGGGTGGTTGTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
3UTR-3UTR TCA 90 bp TTAACGTCAATAAGGATGAGTACTGAATGTAAACCAGTCTTCTGCTCTGGAATCATTTCAGCCAAGGAATaGTGCATGCTACAGATTAAT +
Preference number: 2 (lower is better)
Translates to: LTSIRMSTECKPVFCSGIISAKE*CMLQIN
Trigger: ATTAATCTGTAGCATGCATCATTCCTTGGCTGAAAT...GATTCCAGAGCAGAAGACTGGTTTACATTCAGTACTCATCCTTATTGACGTTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
3UTR-3UTR CAA 90 bp GGGCATGGGCAACAGAAGGAAGGAGGAAAACCCCTAGTGGCAATGATTTACTTGCATCTTGGAAGTTTCTaGGGTAAGCCGGGGTTAGCA +
Preference number: 3 (lower is better)
Translates to: GHGQQKEGGKPLVAMIYLHLGSF*GKPGLA
Trigger: TGCTAACCCCGGCTTACCCAAGAAACTTCCAAGATG...CAAGTAAATCATTGCCACTAGGGGTTTTCCTCCTTCCTTCTGTTGCCCATGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
3UTR CCA 72 bp ATAAAAGAAAGTATCCAGGGCCAGACATTAAACACCTaGGTTCTGACTTTGGCACAGGCCTCAGAAAGCCTC +
Preference number: 3 (lower is better)
Translates to: IKESIQGQTLNT*VLTLAQASESL
Trigger: GAGGCTTTCTGAGGCCTGTGCCAAAGTCAGAACCCAGGTGTTTAATGTCTGGCCCTGGATACTTTCTTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
3UTR GCA 72 bp AAGGGTCAGTTTAGTTCTGGCACAAAGACTGCTGTGTaGCACCCTAAACGTACCTCATCTTGGAAGTTTCTT +
Preference number: 3 (lower is better)
Translates to: KGQFSSGTKTAV*HPKRTSSWKFL
Trigger: AAGAAACTTCCAAGATGAGGTACGTTTAGGGTGGCACACAGCAGTCTTTGTGCCAGAACTAAACTGACCCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
3UTR-3UTR CAA 90 bp TTAACGTCAATAAGGATGAGTACTGAATGTAAACCAGTCTTCTGCTCTGGAATCGTGGCAATGATTTACTaGGAGTGGTATCATGTTCTT +
Preference number: 3 (lower is better)
Translates to: LTSIRMSTECKPVFCSGIVAMIY*EWYHVL
Trigger: AAGAACATGATACCACTCCAAGTAAATCATTGCCAC...GATTCCAGAGCAGAAGACTGGTTTACATTCAGTACTCATCCTTATTGACGTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
3UTR-3UTR CAA 90 bp GGAATCCAAGGTAAGCTACAGAGTTCTCAGTTTACCATCAACACTAAGGTTTTAGTGGCAATGATTTACTaGGAGTGGTATCATGTTCTT +
Preference number: 3 (lower is better)
Translates to: GIQGKLQSSQFTINTKVLVAMIY*EWYHVL
Trigger: AAGAACATGATACCACTCCAAGTAAATCATTGCCAC...TAAAACCTTAGTGTTGATGGTAAACTGAGAACTCTGTAGCTTACCTTGGATTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp TTTCCTCTTACCCTACACTTTCAGGCAGGGGCATGGGCAACAGAAGGAAGGAGGCTGCGGCTGTCACGTTaGCTGGGCCCGACCTGGGGA +
Preference number: 4 (lower is better)
Translates to: FPLTLHFQAGAWATEGRRLRLSR*LGPTWG
Trigger: TCCCCAGGTCGGGCCCAGCCAACGTGACAGCCGCAG...CCTCCTTCCTTCTGTTGCCCATGCCCCTGCCTGAAAGTGTAGGGTAAGAGGAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338205.9
CDS-3UTR GCA 90 bp AGGAAGACGATTGGAATTATCCGAAGGAGACTGACTCTGTCCTCTCCATCTGTACGGAGCCGGTCTCCATaGCGCGGACGCTGCGCTCGG +
Preference number: 4 (lower is better)
Translates to: RKTIGIIRRRLTLSSPSVRSRSP*RGRCAR
Trigger: CCGAGCGCAGCGTCCGCGGCATGGAGACCGGCTCCG...TACAGATGGAGAGGACAGAGTCAGTCTCCTTCGGATAATTCCAATCGTCTTCCT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR TCA 90 bp GATTTGGCAGATGGCCATAAAAGAAAGTATCCAGGGCCAGACATTAAACACCTGTCTCGGCCCCGGCGCTaGCTCAGTCCCGGACGAGCC +
Preference number: 4 (lower is better)
Translates to: DLADGHKRKYPGPDIKHLSRPRR*LSPGRA
Trigger: GGCTCGTCCGGGACTGAGTCAGCGCCGGGGCCGAGA...CAGGTGTTTAATGTCTGGCCCTGGATACTTTCTTTTATGGCCATCTGCCAAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259335.8
CDS-3UTR GCA 90 bp GATTTGGCAGATGGCCATAAAAGAAAGTATCCAGGGCCAGACATTAAACACCTGCGGAGCCGGTCTCCATaGCGCGGACGCTGCGCTCGG +
Preference number: 4 (lower is better)
Translates to: DLADGHKRKYPGPDIKHLRSRSP*RGRCAR
Trigger: CCGAGCGCAGCGTCCGCGGCATGGAGACCGGCTCCG...CAGGTGTTTAATGTCTGGCCCTGGATACTTTCTTTTATGGCCATCTGCCAAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp CAGATGGCCATAAAAGAAAGTATCCAGGGCCAGACATTAAACACCTGGGTTCTGGAGGAAGCCCCGCCCTaGGCCTCCCGCCGAACTTCT +
Preference number: 4 (lower is better)
Translates to: QMAIKESIQGQTLNTWVLEEAPP*ASRRTS
Trigger: AGAAGTTCGGCGGGAGGCGCAGGGCGGGGCTTCCTC...CAGAACCCAGGTGTTTAATGTCTGGCCCTGGATACTTTCTTTTATGGCCATCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259335.8
CDS-3UTR GCA 90 bp TTTCCTCTTACCCTACACTTTCAGGCAGGGGCATGGGCAACAGAAGGAAGGAGGCAGGTCTGCTGCCGTTaGCACACTGTGGCGTGTATC +
Preference number: 4 (lower is better)
Translates to: FPLTLHFQAGAWATEGRRQVCCR*HTVACI
Trigger: GATACACGCCACAGTGTGGCAACGGCAGCAGACCTG...CCTCCTTCCTTCTGTTGCCCATGCCCCTGCCTGAAAGTGTAGGGTAAGAGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp TTTCCTCTTACCCTACACTTTCAGGCAGGGGCATGGGCAACAGAAGGAAGGAGGTCCTCTTCAGTCATTTaGCAGGCATCTCGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: FPLTLHFQAGAWATEGRRSSSVI*QASRAA
Trigger: GGCTGCCCGAGATGCCTGGCAAATGACTGAAGAGGA...CCTCCTTCCTTCTGTTGCCCATGCCCCTGCCTGAAAGTGTAGGGTAAGAGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp TTTCCTCTTACCCTACACTTTCAGGCAGGGGCATGGGCAACAGAAGGAAGGAGGGCCGTTGCCACACTGTaGCGTGTATCACTAGAGGCA +
Preference number: 4 (lower is better)
Translates to: FPLTLHFQAGAWATEGRRAVATL*RVSLEA
Trigger: TGCCTCTAGTGATACACGCCACAGTGTGGCAACGGC...CCTCCTTCCTTCTGTTGCCCATGCCCCTGCCTGAAAGTGTAGGGTAAGAGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp TTTCCTCTTACCCTACACTTTCAGGCAGGGGCATGGGCAACAGAAGGAAGGAGGGTACGAAGCCACAAGTaGCTCCATGAGAGTTCGCTG +
Preference number: 4 (lower is better)
Translates to: FPLTLHFQAGAWATEGRRVRSHK*LHESSL
Trigger: CAGCGAACTCTCATGGAGGCACTTGTGGCTTCGTAC...CCTCCTTCCTTCTGTTGCCCATGCCCCTGCCTGAAAGTGTAGGGTAAGAGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp GGGCATGGGCAACAGAAGGAAGGAGGAAAACCCCTAGTGGCAATGATTTACTTGTTCGCGGCCAGGCTTTaGCCAGGCTTTCAAAGGCAC +
Preference number: 4 (lower is better)
Translates to: GHGQQKEGGKPLVAMIYLFAARL*PGFQRH
Trigger: GTGCCTTTGAAAGCCTGGGCAAAGCCTGGCCGCGAA...CAAGTAAATCATTGCCACTAGGGGTTTTCCTCCTTCCTTCTGTTGCCCATGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp TTTCCTCTTACCCTACACTTTCAGGCAGGGGCATGGGCAACAGAAGGAAGGAGGAAGGCCCTGACCATCTaGTGTTTTGCCAAGAGCTCC +
Preference number: 4 (lower is better)
Translates to: FPLTLHFQAGAWATEGRRKALTI*CFAKSS
Trigger: GGAGCTCTTGGCAAAACACCAGATGGTCAGGGCCTT...CCTCCTTCCTTCTGTTGCCCATGCCCCTGCCTGAAAGTGTAGGGTAAGAGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp TTTCCTCTTACCCTACACTTTCAGGCAGGGGCATGGGCAACAGAAGGAAGGAGGTTTCAATTCCAGGTCTaGTGCCGTTGCCACACTGTG +
Preference number: 4 (lower is better)
Translates to: FPLTLHFQAGAWATEGRRFQFQV*CRCHTV
Trigger: CACAGTGTGGCAACGGCAGCAGACCTGGAATTGAAA...CCTCCTTCCTTCTGTTGCCCATGCCCCTGCCTGAAAGTGTAGGGTAAGAGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp TTTCCTCTTACCCTACACTTTCAGGCAGGGGCATGGGCAACAGAAGGAAGGAGGGATGAGGGTGCCATCTaGCCGCTTGACATTAAAGTC +
Preference number: 4 (lower is better)
Translates to: FPLTLHFQAGAWATEGRRDEGAI*PLDIKV
Trigger: GACTTTAATGTCAAGCGGGCAGATGGCACCCTCATC...CCTCCTTCCTTCTGTTGCCCATGCCCCTGCCTGAAAGTGTAGGGTAAGAGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp TGTTTAGCTTCTGGCTTTCAGAAACCCAATGGTAAGGGTCAGTTTAGTTCTGGCCCGACAGCCCAGTTCTaGTGTGGAGGTGGCTGGTGC +
Preference number: 4 (lower is better)
Translates to: CLASGFQKPNGKGQFSSGPTAQF*CGGGWC
Trigger: GCACCAGCCACCTCCACACCAGAACTGGGCTGTCGG...GCCAGAACTAAACTGACCCTTACCATTGGGTTTCTGAAAGCCAGAAGCTAAACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259335.8
CDS-3UTR CCA 90 bp AGGAAGACGATTGGAATTATCCGAAGGAGACTGACTCTGTCCTCTCCATCTGTAGCAGAAGGGCAGCGATaGTTCTCTGGCCAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: RKTIGIIRRRLTLSSPSVAEGQR*FSGQLL
Trigger: GAGCAGCTGGCCAGAGAACCATCGCTGCCCTTCTGC...TACAGATGGAGAGGACAGAGTCAGTCTCCTTCGGATAATTCCAATCGTCTTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR TCA 90 bp GGGCATGGGCAACAGAAGGAAGGAGGAAAACCCCTAGTGGCAATGATTTACTTGCCAAGAGCTCCCCCTTaGAATACCACTGTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: GHGQQKEGGKPLVAMIYLPRAPP*NTTVSP
Trigger: TGGAGAGACAGTGGTATTTCAAGGGGGAGCTCTTGG...CAAGTAAATCATTGCCACTAGGGGTTTTCCTCCTTCCTTCTGTTGCCCATGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp CAGATGGCCATAAAAGAAAGTATCCAGGGCCAGACATTAAACACCTGGGTTCTGCAATTCCAGGTCTGCTaGCGTTGCCACACTGTGGCG +
Preference number: 4 (lower is better)
Translates to: QMAIKESIQGQTLNTWVLQFQVC*RCHTVA
Trigger: CGCCACAGTGTGGCAACGGCAGCAGACCTGGAATTG...CAGAACCCAGGTGTTTAATGTCTGGCCCTGGATACTTTCTTTTATGGCCATCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp AGGAAGACGATTGGAATTATCCGAAGGAGACTGACTCTGTCCTCTCCATCTGTAGAGCCAGATGCAGGCTaGTTGCCTCACGTGTGGGTT +
Preference number: 4 (lower is better)
Translates to: RKTIGIIRRRLTLSSPSVEPDAG*LPHVWV
Trigger: AACCCACACGTGAGGCAAGCAGCCTGCATCTGGCTC...TACAGATGGAGAGGACAGAGTCAGTCTCCTTCGGATAATTCCAATCGTCTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp CCACTTGGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTATCGCAGCCTTTTCTTaGTCTGTCGCCCGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: PLGFSKNTTTSTPNEHGTIAAFS*SVARRL
Trigger: GAGCCTCCGGGCGACAGAGCAAGAAAAGGCTGCGAT...AGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACCAAGTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp GGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGAGCCCAGTTCTGGTGTaGAGGTGGCTGGTGCTCCCA +
Preference number: 4 (lower is better)
Translates to: GFSKNTTTSTPNEHGTCLSPVLV*RWLVLP
Trigger: TGGGAGCACCAGCCACCTCCACACCAGAACTGGGCT...CAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000259335.8
CDS-3UTR CCA 90 bp TTTCCTCTTACCCTACACTTTCAGGCAGGGGCATGGGCAACAGAAGGAAGGAGGCTAGAGCGGAGGAGATaGGGGACAATCTTTAACTTG +
Preference number: 4 (lower is better)
Translates to: FPLTLHFQAGAWATEGRRLERRR*GTIFNL
Trigger: CAAGTTAAAGATTGTCCCCCATCTCCTCCGCTCTAG...CCTCCTTCCTTCTGTTGCCCATGCCCCTGCCTGAAAGTGTAGGGTAAGAGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp CTTGGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTCCAAACTCTGAGAGGTaGGCACCACCCCCGCACTGT +
Preference number: 4 (lower is better)
Translates to: LGFSKNTTTSTPNEHGTCPNSER*APPPHC
Trigger: ACAGTGCGGGGGTGGTGCCCACCTCTCAGAGTTTGG...ACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACCAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp CTGAATGTAAACCAGTCTTCTGCTCTGGAATCCAAGGTAAGCTACAGAGTTCTCCCAAACTCTGAGAGGTaGGCACCACCCCCGCACTGT +
Preference number: 4 (lower is better)
Translates to: LNVNQSSALESKVSYRVLPNSER*APPPHC
Trigger: ACAGTGCGGGGGTGGTGCCCACCTCTCAGAGTTTGG...GAGAACTCTGTAGCTTACCTTGGATTCCAGAGCAGAAGACTGGTTTACATTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp TGTTTAGCTTCTGGCTTTCAGAAACCCAATGGTAAGGGTCAGTTTAGTTCTGGCGCAGAAGGGCAGCGATaGTTCTCTGGCCAGCTGCTC +
Preference number: 4 (lower is better)
Translates to: CLASGFQKPNGKGQFSSGAEGQR*FSGQLL
Trigger: GAGCAGCTGGCCAGAGAACCATCGCTGCCCTTCTGC...GCCAGAACTAAACTGACCCTTACCATTGGGTTTCTGAAAGCCAGAAGCTAAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp TTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGTTTCGGCTGTCACGTTGGCTaGGCCCGACCTGGGGAAACA +
Preference number: 4 (lower is better)
Translates to: FQRTPPLQPPMNMALVCFGCHVG*ARPGET
Trigger: TGTTTCCCCAGGTCGGGCCCAGCCAACGTGACAGCC...GAAACAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000338205.9
CDS-3UTR TCA 90 bp TTTCCTCTTACCCTACACTTTCAGGCAGGGGCATGGGCAACAGAAGGAAGGAGGAGTCTGTTTTGCAATTaGTGCCATGGCAATTGCACC +
Preference number: 4 (lower is better)
Translates to: FPLTLHFQAGAWATEGRRSLFCN*CHGNCT
Trigger: GGTGCAATTGCCATGGCATCAATTGCAAAACAGACT...CCTCCTTCCTTCTGTTGCCCATGCCCCTGCCTGAAAGTGTAGGGTAAGAGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp TTTACAACCACCCCTCAAACATCCAAGGTTCCATTAAGCTCACTCAGCCCAGATTGTGGAGGTGGCTGGTaGTCCCAAAACGGCCTATGT +
Preference number: 4 (lower is better)
Translates to: FTTTPQTSKVPLSSLSPDCGGGW*SQNGLC
Trigger: ACATAGGCCGTTTTGGGAGCACCAGCCACCTCCACA...ATCTGGGCTGAGTGAGCTTAATGGAACCTTGGATGTTTGAGGGGTGGTTGTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259335.8
CDS-3UTR GCA 90 bp CTGAATGTAAACCAGTCTTCTGCTCTGGAATCCAAGGTAAGCTACAGAGTTCTCCAGGTCTGCTGCCGTTaGCACACTGTGGCGTGTATC +
Preference number: 4 (lower is better)
Translates to: LNVNQSSALESKVSYRVLQVCCR*HTVACI
Trigger: GATACACGCCACAGTGTGGCAACGGCAGCAGACCTG...GAGAACTCTGTAGCTTACCTTGGATTCCAGAGCAGAAGACTGGTTTACATTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp CTTGGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTCAATTCCAGGTCTGCTaGCGTTGCCACACTGTGGCG +
Preference number: 4 (lower is better)
Translates to: LGFSKNTTTSTPNEHGTCQFQVC*RCHTVA
Trigger: CGCCACAGTGTGGCAACGGCAGCAGACCTGGAATTG...ACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp GGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGGAGCCAGATGCAGGCTaGTTGCCTCACGTGTGGGTT +
Preference number: 4 (lower is better)
Translates to: GFSKNTTTSTPNEHGTCLEPDAG*LPHVWV
Trigger: AACCCACACGTGAGGCAAGCAGCCTGCATCTGGCTC...CAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp CTGAATGTAAACCAGTCTTCTGCTCTGGAATCCAAGGTAAGCTACAGAGTTCTCGGGAAAGGAGCCAGATaGAGGCTGCTTGCCTCACGT +
Preference number: 4 (lower is better)
Translates to: LNVNQSSALESKVSYRVLGKGAR*RLLASR
Trigger: ACGTGAGGCAAGCAGCCTGCATCTGGCTCCTTTCCC...GAGAACTCTGTAGCTTACCTTGGATTCCAGAGCAGAAGACTGGTTTACATTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp CTTGGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTGGGAAAGGAGCCAGATaGAGGCTGCTTGCCTCACGT +
Preference number: 4 (lower is better)
Translates to: LGFSKNTTTSTPNEHGTCGKGAR*RLLASR
Trigger: ACGTGAGGCAAGCAGCCTGCATCTGGCTCCTTTCCC...ACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp GGGCATGGGCAACAGAAGGAAGGAGGAAAACCCCTAGTGGCAATGATTTACTTGGACCATCTGGTGTTTTaGCAAGAGCTCCCCCTTGAA +
Preference number: 4 (lower is better)
Translates to: GHGQQKEGGKPLVAMIYLDHLVF*QELPLE
Trigger: TTCAAGGGGGAGCTCTTGGCAAAACACCAGATGGTC...CAAGTAAATCATTGCCACTAGGGGTTTTCCTCCTTCCTTCTGTTGCCCATGCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp CAGATGGCCATAAAAGAAAGTATCCAGGGCCAGACATTAAACACCTGGGTTCTGCTTCCAGCCAGGCCTTaGAGCAATGCGGTCAGTATC +
Preference number: 4 (lower is better)
Translates to: QMAIKESIQGQTLNTWVLLPARP*SNAVSI
Trigger: GATACTGACCGCATTGCTGCAAGGCCTGGCTGGAAG...CAGAACCCAGGTGTTTAATGTCTGGCCCTGGATACTTTCTTTTATGGCCATCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp TGTTTAGCTTCTGGCTTTCAGAAACCCAATGGTAAGGGTCAGTTTAGTTCTGGCTTCGCGGCCAGGCTTTaGCCAGGCTTTCAAAGGCAC +
Preference number: 4 (lower is better)
Translates to: CLASGFQKPNGKGQFSSGFAARL*PGFQRH
Trigger: GTGCCTTTGAAAGCCTGGGCAAAGCCTGGCCGCGAA...GCCAGAACTAAACTGACCCTTACCATTGGGTTTCTGAAAGCCAGAAGCTAAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp CTGAATGTAAACCAGTCTTCTGCTCTGGAATCCAAGGTAAGCTACAGAGTTCTCTGGTGTGGAGGTGGCTaGTGCTCCCAAAACGGCCTA +
Preference number: 4 (lower is better)
Translates to: LNVNQSSALESKVSYRVLWCGGG*CSQNGL
Trigger: TAGGCCGTTTTGGGAGCACCAGCCACCTCCACACCA...GAGAACTCTGTAGCTTACCTTGGATTCCAGAGCAGAAGACTGGTTTACATTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259335.8
CDS-3UTR CCA 90 bp AGGAAGACGATTGGAATTATCCGAAGGAGACTGACTCTGTCCTCTCCATCTGTAGTATGTAGCGCCCAATaGCTGGGGCATGATCCTGCA +
Preference number: 4 (lower is better)
Translates to: RKTIGIIRRRLTLSSPSVVCSAQ*LGHDPA
Trigger: TGCAGGATCATGCCCCAGCCATTGGGCGCTACATAC...TACAGATGGAGAGGACAGAGTCAGTCTCCTTCGGATAATTCCAATCGTCTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp TTTCCTCTTACCCTACACTTTCAGGCAGGGGCATGGGCAACAGAAGGAAGGAGGGAAGTTCTATCTGCTTaGCCTCCACAGAATCCATCA +
Preference number: 4 (lower is better)
Translates to: FPLTLHFQAGAWATEGRREVLSA*PPQNPS
Trigger: TGATGGATTCTGTGGAGGCCAAGCAGATAGAACTTC...CCTCCTTCCTTCTGTTGCCCATGCCCCTGCCTGAAAGTGTAGGGTAAGAGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp GGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGGCAGCGATGGTTCTCTaGCCAGCTGCTCCTTTGGCA +
Preference number: 4 (lower is better)
Translates to: GFSKNTTTSTPNEHGTCLAAMVL*PAAPLA
Trigger: TGCCAAAGGAGCAGCTGGCCAGAGAACCATCGCTGC...CAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
3UTR CAA 72 bp TGTGCCACCCTAAACGTACCTCATCTTGGAAGTTTCTaGGGTAAGCCGGGGTTAGCACTGATTTGGCAGATG +
Preference number: 4 (lower is better)
Translates to: CATLNVPHLGSF*GKPGLALIWQM
Trigger: CATCTGCCAAATCAGTGCTAACCCCGGCTTACCCAAGAAACTTCCAAGATGAGGTACGTTTAGGGTGGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR TCA 90 bp GATGCTAAACAATCATTTTCTCCAAATCAACCACCTAAACACATGACAAGACAAGGCGGGCCTCTGACCTaGGTCGGAGCCGGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: DAKQSFSPNQPPKHMTRQGGPLT*VGAGLH
Trigger: ATGGAGACCGGCTCCGACTCAGGTCAGAGGCCCGCC...TTGTCTTGTCATGTGTTTAGGTGGTTGATTTGGAGAAAATGATTGTTTAGCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259335.8
CDS-3UTR TCA 90 bp AGGAAGACGATTGGAATTATCCGAAGGAGACTGACTCTGTCCTCTCCATCTGTAGCAGGGTCCTGGTACTaGACCAACAGTGTCTCTACT +
Preference number: 4 (lower is better)
Translates to: RKTIGIIRRRLTLSSPSVAGSWY*TNSVST
Trigger: AGTAGAGACACTGTTGGTTCAGTACCAGGACCCTGC...TACAGATGGAGAGGACAGAGTCAGTCTCCTTCGGATAATTCCAATCGTCTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR TCA 90 bp TTTCCTCTTACCCTACACTTTCAGGCAGGGGCATGGGCAACAGAAGGAAGGAGGGCCACTTGTCGAACTTaGACTTCAGGCTTTATTAAG +
Preference number: 4 (lower is better)
Translates to: FPLTLHFQAGAWATEGRRATCRT*TSGFIK
Trigger: CTTAATAAAGCCTGAAGTTCAAGTTCGACAAGTGGC...CCTCCTTCCTTCTGTTGCCCATGCCCCTGCCTGAAAGTGTAGGGTAAGAGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR TCA 90 bp CTTGGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTAGTCGAGGAACTAGCTaGGGCAGAAAAGGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: LGFSKNTTTSTPNEHGTCSRGTS*GRKGAS
Trigger: GCTGGCTCCTTTTCTGCCTCAGCTAGTTCCTCGACT...ACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR TCA 90 bp CTGAATGTAAACCAGTCTTCTGCTCTGGAATCCAAGGTAAGCTACAGAGTTCTCAGTCGAGGAACTAGCTaGGGCAGAAAAGGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: LNVNQSSALESKVSYRVLSRGTS*GRKGAS
Trigger: GCTGGCTCCTTTTCTGCCTCAGCTAGTTCCTCGACT...GAGAACTCTGTAGCTTACCTTGGATTCCAGAGCAGAAGACTGGTTTACATTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR TCA 90 bp CTATTTCTGCCAGTTTCCTTTACAACCACCCCTCAAACATCCAAGGTTCCATTACCGTTCAAGCTGATCTaGGTCGGAGCCGGTCTCCAT +
Preference number: 4 (lower is better)
Translates to: LFLPVSFTTTPQTSKVPLPFKLI*VGAGLH
Trigger: ATGGAGACCGGCTCCGACTCAGATCAGCTTGAACGG...TAATGGAACCTTGGATGTTTGAGGGGTGGTTGTAAAGGAAACTGGCAGAAATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000338205.9
CDS-3UTR GCA 90 bp GGGCATGGGCAACAGAAGGAAGGAGGAAAACCCCTAGTGGCAATGATTTACTTGCTCTGGCTTCAGAACTaGACCCTCTTTTGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: GHGQQKEGGKPLVAMIYLLWLQN*TLFCLQ
Trigger: CTGAAGACAAAAGAGGGTGCAGTTCTGAAGCCAGAG...CAAGTAAATCATTGCCACTAGGGGTTTTCCTCCTTCCTTCTGTTGCCCATGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp GTACCTCATCTTGGAAGTTTCTTGGGTAAGCCGGGGTTAGCACTGATTTGGCAGGATCTCTCCAAAGGCTaGTGGGTTAAATGGAAGGAC +
Preference number: 4 (lower is better)
Translates to: VPHLGSFLGKPGLALIWQDLSKG*WVKWKD
Trigger: GTCCTTCCATTTAACCCAGCAGCCTTTGGAGAGATC...CTGCCAAATCAGTGCTAACCCCGGCTTACCCAAGAAACTTCCAAGATGAGGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp CTGAATGTAAACCAGTCTTCTGCTCTGGAATCCAAGGTAAGCTACAGAGTTCTCTCCTCTTCAGTCATTTaGCAGGCATCTCGGGCAGCC +
Preference number: 4 (lower is better)
Translates to: LNVNQSSALESKVSYRVLSSSVI*QASRAA
Trigger: GGCTGCCCGAGATGCCTGGCAAATGACTGAAGAGGA...GAGAACTCTGTAGCTTACCTTGGATTCCAGAGCAGAAGACTGGTTTACATTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp AGGAAGACGATTGGAATTATCCGAAGGAGACTGACTCTGTCCTCTCCATCTGTAAGAAAAGGAGCCAGCTaGTCTCCAGCTCTGGTAGCA +
Preference number: 4 (lower is better)
Translates to: RKTIGIIRRRLTLSSPSVRKGAS*SPALVA
Trigger: TGCTACCAGAGCTGGAGAGCAGCTGGCTCCTTTTCT...TACAGATGGAGAGGACAGAGTCAGTCTCCTTCGGATAATTCCAATCGTCTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp TTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGTTTCGGTTCTCTGGCCAGCTaGTCCTTTGGCAGGGTCACA +
Preference number: 4 (lower is better)
Translates to: FQRTPPLQPPMNMALVCFGSLAS*SFGRVT
Trigger: TGTGACCCTGCCAAAGGAGCAGCTGGCCAGAGAACC...GAAACAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp TTTACAACCACCCCTCAAACATCCAAGGTTCCATTAAGCTCACTCAGCCCAGATGCAGGAGTTTTTCAGTaGTGCTATCCCGTGAGGTCC +
Preference number: 4 (lower is better)
Translates to: FTTTPQTSKVPLSSLSPDAGVFQ*CYPVRS
Trigger: GGACCTCACGGGATAGCAGCACTGAAAAACTCCTGC...ATCTGGGCTGAGTGAGCTTAATGGAACCTTGGATGTTTGAGGGGTGGTTGTAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp CAGATGGCCATAAAAGAAAGTATCCAGGGCCAGACATTAAACACCTGGGTTCTGGCAGGAGTTTTTCAGTaGTGCTATCCCGTGAGGTCC +
Preference number: 4 (lower is better)
Translates to: QMAIKESIQGQTLNTWVLAGVFQ*CYPVRS
Trigger: GGACCTCACGGGATAGCAGCACTGAAAAACTCCTGC...CAGAACCCAGGTGTTTAATGTCTGGCCCTGGATACTTTCTTTTATGGCCATCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp CAGATGGCCATAAAAGAAAGTATCCAGGGCCAGACATTAAACACCTGGGTTCTGCAGGCCTTGCAGCAATaGGGTCAGTATCATTCCGAG +
Preference number: 4 (lower is better)
Translates to: QMAIKESIQGQTLNTWVLQALQQ*GQYHSE
Trigger: CTCGGAATGATACTGACCGCATTGCTGCAAGGCCTG...CAGAACCCAGGTGTTTAATGTCTGGCCCTGGATACTTTCTTTTATGGCCATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp CCACTTGGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTCAGGCCTTGCAGCAATaGGGTCAGTATCATTCCGAG +
Preference number: 4 (lower is better)
Translates to: PLGFSKNTTTSTPNEHGTQALQQ*GQYHSE
Trigger: CTCGGAATGATACTGACCGCATTGCTGCAAGGCCTG...AGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACCAAGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000374383.1
CDS-3UTR GCA 90 bp GGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGCTTCCAGCCAGGCCTTaGAGCAATGCGGTCAGTATC +
Preference number: 4 (lower is better)
Translates to: GFSKNTTTSTPNEHGTCLLPARP*SNAVSI
Trigger: GATACTGACCGCATTGCTGCAAGGCCTGGCTGGAAG...CAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000374383.1
CDS-3UTR GCA 90 bp AGGAAGACGATTGGAATTATCCGAAGGAGACTGACTCTGTCCTCTCCATCTGTATTTCCAGCTCTGCACTaGAAGCTGTCACCACACAGG +
Preference number: 4 (lower is better)
Translates to: RKTIGIIRRRLTLSSPSVFPALH*KLSPHR
Trigger: CCTGTGTGGTGACAGCTTGCAGTGCAGAGCTGGAAA...TACAGATGGAGAGGACAGAGTCAGTCTCCTTCGGATAATTCCAATCGTCTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp GGGCATGGGCAACAGAAGGAAGGAGGAAAACCCCTAGTGGCAATGATTTACTTGTTGTCCGGACCCCACTaGTTTCAAGTGAGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: GHGQQKEGGKPLVAMIYLLSGPH*FQVSSS
Trigger: AGAAGAACTCACTTGAAAGCAGTGGGGTCCGGACAA...CAAGTAAATCATTGCCACTAGGGGTTTTCCTCCTTCCTTCTGTTGCCCATGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp GGGCATGGGCAACAGAAGGAAGGAGGAAAACCCCTAGTGGCAATGATTTACTTGAATGTGGCATCCGACTaGAGAGTTTTCCAACAGCTG +
Preference number: 4 (lower is better)
Translates to: GHGQQKEGGKPLVAMIYLNVASD*RVFQQL
Trigger: CAGCTGTTGGAAAACTCTCCAGTCGGATGCCACATT...CAAGTAAATCATTGCCACTAGGGGTTTTCCTCCTTCCTTCTGTTGCCCATGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp GATTTGGCAGATGGCCATAAAAGAAAGTATCCAGGGCCAGACATTAAACACCTGGGCTGCTGGGTTAAATaGAAGGACAGTGGTCCCGGT +
Preference number: 4 (lower is better)
Translates to: DLADGHKRKYPGPDIKHLGCWVK*KDSGPG
Trigger: ACCGGGACCACTGTCCTTCCATTTAACCCAGCAGCC...CAGGTGTTTAATGTCTGGCCCTGGATACTTTCTTTTATGGCCATCTGCCAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp TGTTTAGCTTCTGGCTTTCAGAAACCCAATGGTAAGGGTCAGTTTAGTTCTGGCGGCTGCTGGGTTAAATaGAAGGACAGTGGTCCCGGT +
Preference number: 4 (lower is better)
Translates to: CLASGFQKPNGKGQFSSGGCWVK*KDSGPG
Trigger: ACCGGGACCACTGTCCTTCCATTTAACCCAGCAGCC...GCCAGAACTAAACTGACCCTTACCATTGGGTTTCTGAAAGCCAGAAGCTAAACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp GGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGGTAGCGCCCAATGGCTaGGGCATGATCCTGCATATC +
Preference number: 4 (lower is better)
Translates to: GFSKNTTTSTPNEHGTCLVAPNG*GMILHI
Trigger: GATATGCAGGATCATGCCCCAGCCATTGGGCGCTAC...CAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp AGGAAGACGATTGGAATTATCCGAAGGAGACTGACTCTGTCCTCTCCATCTGTATGCTTGCCTCACGTGTaGGTTGGGGCTGATGATATG +
Preference number: 4 (lower is better)
Translates to: RKTIGIIRRRLTLSSPSVCLPHV*VGADDM
Trigger: CATATCATCAGCCCCAACCCACACGTGAGGCAAGCA...TACAGATGGAGAGGACAGAGTCAGTCTCCTTCGGATAATTCCAATCGTCTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp CAGATGGCCATAAAAGAAAGTATCCAGGGCCAGACATTAAACACCTGGGTTCTGTGCTTGCCTCACGTGTaGGTTGGGGCTGATGATATG +
Preference number: 4 (lower is better)
Translates to: QMAIKESIQGQTLNTWVLCLPHV*VGADDM
Trigger: CATATCATCAGCCCCAACCCACACGTGAGGCAAGCA...CAGAACCCAGGTGTTTAATGTCTGGCCCTGGATACTTTCTTTTATGGCCATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp CAGATGGCCATAAAAGAAAGTATCCAGGGCCAGACATTAAACACCTGGGTTCTGAAGGCCCTGACCATCTaGTGTTTTGCCAAGAGCTCC +
Preference number: 4 (lower is better)
Translates to: QMAIKESIQGQTLNTWVLKALTI*CFAKSS
Trigger: GGAGCTCTTGGCAAAACACCAGATGGTCAGGGCCTT...CAGAACCCAGGTGTTTAATGTCTGGCCCTGGATACTTTCTTTTATGGCCATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp GTACCTCATCTTGGAAGTTTCTTGGGTAAGCCGGGGTTAGCACTGATTTGGCAGTTGTGCTGGGTTGATTaGGCACAGACTTTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: VPHLGSFLGKPGLALIWQLCWVD*AQTFPA
Trigger: AGCTGGAAAAGTCTGTGCCCAATCAACCCAGCACAA...CTGCCAAATCAGTGCTAACCCCGGCTTACCCAAGAAACTTCCAAGATGAGGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp TTTCCTCTTACCCTACACTTTCAGGCAGGGGCATGGGCAACAGAAGGAAGGAGGATGTTAGAGAACTCCTaGAATCTGTCCTCTTTGGTG +
Preference number: 4 (lower is better)
Translates to: FPLTLHFQAGAWATEGRRMLENS*NLSSLV
Trigger: CACCAAAGAGGACAGATTCCAGGAGTTCTCTAACAT...CCTCCTTCCTTCTGTTGCCCATGCCCCTGCCTGAAAGTGTAGGGTAAGAGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR TCA 90 bp GATTTGGCAGATGGCCATAAAAGAAAGTATCCAGGGCCAGACATTAAACACCTGGCAGGGTCCTGGTACTaGACCAACAGTGTCTCTACT +
Preference number: 4 (lower is better)
Translates to: DLADGHKRKYPGPDIKHLAGSWY*TNSVST
Trigger: AGTAGAGACACTGTTGGTTCAGTACCAGGACCCTGC...CAGGTGTTTAATGTCTGGCCCTGGATACTTTCTTTTATGGCCATCTGCCAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR TCA 90 bp GGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGGGAAGGGATATGATCTaGGGGAAACACCGTACTGGC +
Preference number: 4 (lower is better)
Translates to: GFSKNTTTSTPNEHGTCLGRDMI*GKHRTG
Trigger: GCCAGTACGGTGTTTCCCTCAGATCATATCCCTTCC...CAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR TCA 90 bp CTGAATGTAAACCAGTCTTCTGCTCTGGAATCCAAGGTAAGCTACAGAGTTCTCCCAATGGCTGGGGCATaGTCCTGCATATCAGCCAAA +
Preference number: 4 (lower is better)
Translates to: LNVNQSSALESKVSYRVLPMAGA*SCISAK
Trigger: TTTGGCTGATATGCAGGATCATGCCCCAGCCATTGG...GAGAACTCTGTAGCTTACCTTGGATTCCAGAGCAGAAGACTGGTTTACATTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR TCA 90 bp TTTACAACCACCCCTCAAACATCCAAGGTTCCATTAAGCTCACTCAGCCCAGATAATACCTTCCCACCGTaGATCCCAATGCAAGCAAGG +
Preference number: 4 (lower is better)
Translates to: FTTTPQTSKVPLSSLSPDNTFPP*IPMQAR
Trigger: CCTTGCTTGCATTGGGATTCACGGTGGGAAGGTATT...ATCTGGGCTGAGTGAGCTTAATGGAACCTTGGATGTTTGAGGGGTGGTTGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR TCA 90 bp TTTACAACCACCCCTCAAACATCCAAGGTTCCATTAAGCTCACTCAGCCCAGATCTAGCAGAGCTGGAATaGGTTTTGGTGCATGCGGTT +
Preference number: 4 (lower is better)
Translates to: FTTTPQTSKVPLSSLSPDLAELE*VLVHAV
Trigger: AACCGCATGCACCAAAACTCATTCCAGCTCTGCTAG...ATCTGGGCTGAGTGAGCTTAATGGAACCTTGGATGTTTGAGGGGTGGTTGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR TCA 90 bp GGGCATGGGCAACAGAAGGAAGGAGGAAAACCCCTAGTGGCAATGATTTACTTGCACTTCAACCCCCAATaGACATGGCACTTGTTTGTT +
Preference number: 4 (lower is better)
Translates to: GHGQQKEGGKPLVAMIYLHFNPQ*TWHLFV
Trigger: AACAAACAAGTGCCATGTTCATTGGGGGTTGAAGTG...CAAGTAAATCATTGCCACTAGGGGTTTTCCTCCTTCCTTCTGTTGCCCATGCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR TCA 90 bp CCACTTGGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTGCCTCAGAAAGCCTCTaGGATGACACAGCTTCCTAT +
Preference number: 4 (lower is better)
Translates to: PLGFSKNTTTSTPNEHGTASESL*DDTASY
Trigger: ATAGGAAGCTGTGTCATCTCAGAGGCTTTCTGAGGC...AGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACCAAGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR TCA 90 bp TTTACAACCACCCCTCAAACATCCAAGGTTCCATTAAGCTCACTCAGCCCAGATTTATCCGAAGGAGACTaGCTCTGTCCTCTCCATCTG +
Preference number: 4 (lower is better)
Translates to: FTTTPQTSKVPLSSLSPDLSEGD*LCPLHL
Trigger: CAGATGGAGAGGACAGAGTCAGTCTCCTTCGGATAA...ATCTGGGCTGAGTGAGCTTAATGGAACCTTGGATGTTTGAGGGGTGGTTGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp GGGCATGGGCAACAGAAGGAAGGAGGAAAACCCCTAGTGGCAATGATTTACTTGCATGAGAGTTCGCTGTaGCCCTTCCAAAGTACTATA +
Preference number: 4 (lower is better)
Translates to: GHGQQKEGGKPLVAMIYLHESSL*PFQSTI
Trigger: TATAGTACTTTGGAAGGGGCACAGCGAACTCTCATG...CAAGTAAATCATTGCCACTAGGGGTTTTCCTCCTTCCTTCTGTTGCCCATGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp TGTTTAGCTTCTGGCTTTCAGAAACCCAATGGTAAGGGTCAGTTTAGTTCTGGCGTACGAAGCCACAAGTaGCTCCATGAGAGTTCGCTG +
Preference number: 4 (lower is better)
Translates to: CLASGFQKPNGKGQFSSGVRSHK*LHESSL
Trigger: CAGCGAACTCTCATGGAGGCACTTGTGGCTTCGTAC...GCCAGAACTAAACTGACCCTTACCATTGGGTTTCTGAAAGCCAGAAGCTAAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp CCACTTGGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTGCGCAAGGCACATaGGCAAGTACAGAACGATCT +
Preference number: 4 (lower is better)
Translates to: PLGFSKNTTTSTPNEHGTCAQGT*ASTERS
Trigger: AGATCGTTCTGTACTTGCGCATGTGCCTTGCGCACA...AGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACCAAGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp TTTACAACCACCCCTCAAACATCCAAGGTTCCATTAAGCTCACTCAGCCCAGATGAAGTGGACCATTTCTaGCAATTTCACCCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: FTTTPQTSKVPLSSLSPDEVDHF*QFHPGL
Trigger: CAGCCCTGGGTGAAATTGGCAGAAATGGTCCACTTC...ATCTGGGCTGAGTGAGCTTAATGGAACCTTGGATGTTTGAGGGGTGGTTGTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp GTACCTCATCTTGGAAGTTTCTTGGGTAAGCCGGGGTTAGCACTGATTTGGCAGATGAGTTTTGGTGCATaGGGTTTCAACATGGCTCCT +
Preference number: 4 (lower is better)
Translates to: VPHLGSFLGKPGLALIWQMSFGA*GFNMAP
Trigger: AGGAGCCATGTTGAAACCGCATGCACCAAAACTCAT...CTGCCAAATCAGTGCTAACCCCGGCTTACCCAAGAAACTTCCAAGATGAGGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp TTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGTTTATCGCAGCCTTTTCTTaGTCTGTCGCCCGGAGGCTC +
Preference number: 4 (lower is better)
Translates to: FSKNTTTSTPNEHGTCLFIAAFS*SVARRL
Trigger: GAGCCTCCGGGCGACAGAGCAAGAAAAGGCTGCGAT...AAACAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp GGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGTTTCCAGCTCTGCACTaGAAGCTGTCACCACACAGG +
Preference number: 4 (lower is better)
Translates to: GFSKNTTTSTPNEHGTCLFPALH*KLSPHR
Trigger: CCTGTGTGGTGACAGCTTGCAGTGCAGAGCTGGAAA...CAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000374383.1
CDS-3UTR GCA 90 bp TGTTTAGCTTCTGGCTTTCAGAAACCCAATGGTAAGGGTCAGTTTAGTTCTGGCTGCAGGACTCCTAGCTaGACTTTCCACGTGCTGAGT +
Preference number: 4 (lower is better)
Translates to: CLASGFQKPNGKGQFSSGCRTPS*TFHVLS
Trigger: ACTCAGCACGTGGAAAGTGCAGCTAGGAGTCCTGCA...GCCAGAACTAAACTGACCCTTACCATTGGGTTTCTGAAAGCCAGAAGCTAAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp TTTCCTCTTACCCTACACTTTCAGGCAGGGGCATGGGCAACAGAAGGAAGGAGGCTGGAAGTTGTATTTTaGGGCGGCTTTTTATACGTT +
Preference number: 4 (lower is better)
Translates to: FPLTLHFQAGAWATEGRRLEVVF*GGFLYV
Trigger: AACGTATAAAAAGCCGCCCCAAAATACAACTTCCAG...CCTCCTTCCTTCTGTTGCCCATGCCCCTGCCTGAAAGTGTAGGGTAAGAGGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp GTACCTCATCTTGGAAGTTTCTTGGGTAAGCCGGGGTTAGCACTGATTTGGCAGGAGGCAATCACCAAGTaGAGAACAGCTTCAAGTTCA +
Preference number: 4 (lower is better)
Translates to: VPHLGSFLGKPGLALIWQEAITK*RTASSS
Trigger: TGAACTTGAAGCTGTTCTCCACTTGGTGATTGCCTC...CTGCCAAATCAGTGCTAACCCCGGCTTACCCAAGAAACTTCCAAGATGAGGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp TTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGTTTCGTAGCGCCCAATGGCTaGGGCATGATCCTGCATATC +
Preference number: 4 (lower is better)
Translates to: FQRTPPLQPPMNMALVCFVAPNG*GMILHI
Trigger: GATATGCAGGATCATGCCCCAGCCATTGGGCGCTAC...GAAACAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp TGTTTAGCTTCTGGCTTTCAGAAACCCAATGGTAAGGGTCAGTTTAGTTCTGGCTCCCTCACTGGGGATTaGAAGTGGACCATTTCTGCC +
Preference number: 4 (lower is better)
Translates to: CLASGFQKPNGKGQFSSGSLTGD*KWTISA
Trigger: GGCAGAAATGGTCCACTTCCAATCCCCAGTGAGGGA...GCCAGAACTAAACTGACCCTTACCATTGGGTTTCTGAAAGCCAGAAGCTAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp TGTTTAGCTTCTGGCTTTCAGAAACCCAATGGTAAGGGTCAGTTTAGTTCTGGCAGCCAGATCCCTCACTaGGGATTGGAAGTGGACCAT +
Preference number: 4 (lower is better)
Translates to: CLASGFQKPNGKGQFSSGSQIPH*GLEVDH
Trigger: ATGGTCCACTTCCAATCCCCAGTGAGGGATCTGGCT...GCCAGAACTAAACTGACCCTTACCATTGGGTTTCTGAAAGCCAGAAGCTAAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp TGTTTAGCTTCTGGCTTTCAGAAACCCAATGGTAAGGGTCAGTTTAGTTCTGGCGGCCAGCTGCTCCTTTaGCAGGGTCACACATTTTCA +
Preference number: 4 (lower is better)
Translates to: CLASGFQKPNGKGQFSSGGQLLL*QGHTFS
Trigger: TGAAAATGTGTGACCCTGCCAAAGGAGCAGCTGGCC...GCCAGAACTAAACTGACCCTTACCATTGGGTTTCTGAAAGCCAGAAGCTAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp GGGCATGGGCAACAGAAGGAAGGAGGAAAACCCCTAGTGGCAATGATTTACTTGCAGACATTAAACACCTaGGTTCTGACTTTGGCACAG +
Preference number: 4 (lower is better)
Translates to: GHGQQKEGGKPLVAMIYLQTLNT*VLTLAQ
Trigger: CTGTGCCAAAGTCAGAACCCAGGTGTTTAATGTCTG...CAAGTAAATCATTGCCACTAGGGGTTTTCCTCCTTCCTTCTGTTGCCCATGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR TCA 90 bp CTGAATGTAAACCAGTCTTCTGCTCTGGAATCCAAGGTAAGCTACAGAGTTCTCCCATCATACACCACCTaGATGTTGGCTGGGAACGTT +
Preference number: 4 (lower is better)
Translates to: LNVNQSSALESKVSYRVLPSYTT*MLAGNV
Trigger: AACGTTCCCAGCCAACATTCAGGTGGTGTATGATGG...GAGAACTCTGTAGCTTACCTTGGATTCCAGAGCAGAAGACTGGTTTACATTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR TCA 90 bp GGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGCCATCATACACCACCTaGATGTTGGCTGGGAACGTT +
Preference number: 4 (lower is better)
Translates to: GFSKNTTTSTPNEHGTCLPSYTT*MLAGNV
Trigger: AACGTTCCCAGCCAACATTCAGGTGGTGTATGATGG...CAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR TCA 90 bp TTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGTTTCGGAAGGGATATGATCTaGGGGAAACACCGTACTGGC +
Preference number: 4 (lower is better)
Translates to: FQRTPPLQPPMNMALVCFGRDMI*GKHRTG
Trigger: GCCAGTACGGTGTTTCCCTCAGATCATATCCCTTCC...GAAACAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR TCA 90 bp CTATTTCTGCCAGTTTCCTTTACAACCACCCCTCAAACATCCAAGGTTCCATTACCAATGGCTGGGGCATaGTCCTGCATATCAGCCAAA +
Preference number: 4 (lower is better)
Translates to: LFLPVSFTTTPQTSKVPLPMAGA*SCISAK
Trigger: TTTGGCTGATATGCAGGATCATGCCCCAGCCATTGG...TAATGGAACCTTGGATGTTTGAGGGGTGGTTGTAAAGGAAACTGGCAGAAATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR TCA 90 bp GATTTGGCAGATGGCCATAAAAGAAAGTATCCAGGGCCAGACATTAAACACCTGAATACCTTCCCACCGTaGATCCCAATGCAAGCAAGG +
Preference number: 4 (lower is better)
Translates to: DLADGHKRKYPGPDIKHLNTFPP*IPMQAR
Trigger: CCTTGCTTGCATTGGGATTCACGGTGGGAAGGTATT...CAGGTGTTTAATGTCTGGCCCTGGATACTTTCTTTTATGGCCATCTGCCAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR TCA 90 bp CCACTTGGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTAAGAGGAGTTTCTGGTaGGGAAAATCTCCATCCCCA +
Preference number: 4 (lower is better)
Translates to: PLGFSKNTTTSTPNEHGTKRSFW*GKSPSP
Trigger: TGGGGATGGAGATTTTCCTCACCAGAAACTCCTCTT...AGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACCAAGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR TCA 90 bp TTTACAACCACCCCTCAAACATCCAAGGTTCCATTAAGCTCACTCAGCCCAGATTCGCCAATAGTGAACTaGAGTTCTATCTGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: FTTTPQTSKVPLSSLSPDSPIVN*SSICLA
Trigger: GGCCAAGCAGATAGAACTTCAGTTCACTATTGGCGA...ATCTGGGCTGAGTGAGCTTAATGGAACCTTGGATGTTTGAGGGGTGGTTGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR TCA 90 bp TGTTTAGCTTCTGGCTTTCAGAAACCCAATGGTAAGGGTCAGTTTAGTTCTGGCCAACCCAAGGCCCTTTaGTGCAACATCTTGGCTAAG +
Preference number: 4 (lower is better)
Translates to: CLASGFQKPNGKGQFSSGQPKAL*CNILAK
Trigger: CTTAGCCAAGATGTTGCATCAAAGGGCCTTGGGTTG...GCCAGAACTAAACTGACCCTTACCATTGGGTTTCTGAAAGCCAGAAGCTAAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR TCA 90 bp CCACTTGGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTTCATTTTCCAGGACTaGGACTGCAAAGCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: PLGFSKNTTTSTPNEHGTFIFQD*DCKAFW
Trigger: CCAGAAGGCTTTGCAGTCTCAGTCCTGGAAAATGAA...AGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACCAAGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000374383.1
CDS-3UTR TCA 90 bp CCACTTGGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTCATTTGTGCTGGGTTaGTTGGGCACAGACTTTTCC +
Preference number: 4 (lower is better)
Translates to: PLGFSKNTTTSTPNEHGTSFVLG*LGTDFS
Trigger: GGAAAAGTCTGTGCCCAATCAACCCAGCACAAATGA...AGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACCAAGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000374383.1
CDS-3UTR TCA 90 bp TTTACAACCACCCCTCAAACATCCAAGGTTCCATTAAGCTCACTCAGCCCAGATCCCACTGCTTTCAAGTaGGTTCTTCTTGATGAGAGG +
Preference number: 4 (lower is better)
Translates to: FTTTPQTSKVPLSSLSPDPTAFK*VLLDER
Trigger: CCTCTCATCAAGAAGAACTCACTTGAAAGCAGTGGG...ATCTGGGCTGAGTGAGCTTAATGGAACCTTGGATGTTTGAGGGGTGGTTGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR TCA 90 bp CTGAATGTAAACCAGTCTTCTGCTCTGGAATCCAAGGTAAGCTACAGAGTTCTCTTATCCGAAGGAGACTaGCTCTGTCCTCTCCATCTG +
Preference number: 4 (lower is better)
Translates to: LNVNQSSALESKVSYRVLLSEGD*LCPLHL
Trigger: CAGATGGAGAGGACAGAGTCAGTCTCCTTCGGATAA...GAGAACTCTGTAGCTTACCTTGGATTCCAGAGCAGAAGACTGGTTTACATTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp GTACCTCATCTTGGAAGTTTCTTGGGTAAGCCGGGGTTAGCACTGATTTGGCAGCTGATTTTAACTTTCTaGCTTCGCTTTGTCCGTGAG +
Preference number: 4 (lower is better)
Translates to: VPHLGSFLGKPGLALIWQLILTF*LRFVRE
Trigger: CTCACGGACAAAGCGAAGGCAGAAAGTTAAAATCAG...CTGCCAAATCAGTGCTAACCCCGGCTTACCCAAGAAACTTCCAAGATGAGGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259335.8
CDS-3UTR GCA 90 bp CCACTTGGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTAGGGCTTCAAAAAGCTaGTGCACAAGCGCTATATCC +
Preference number: 4 (lower is better)
Translates to: PLGFSKNTTTSTPNEHGTRASKS*CTSAIS
Trigger: GGATATAGCGCTTGTGCAGCAGCTTTTTGAAGCCCT...AGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACCAAGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp TTTACAACCACCCCTCAAACATCCAAGGTTCCATTAAGCTCACTCAGCCCAGATGATCTCTCCAAAGGCTaGTGGGTTAAATGGAAGGAC +
Preference number: 4 (lower is better)
Translates to: FTTTPQTSKVPLSSLSPDDLSKG*WVKWKD
Trigger: GTCCTTCCATTTAACCCAGCAGCCTTTGGAGAGATC...ATCTGGGCTGAGTGAGCTTAATGGAACCTTGGATGTTTGAGGGGTGGTTGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp CTGAATGTAAACCAGTCTTCTGCTCTGGAATCCAAGGTAAGCTACAGAGTTCTCGATGAGGGTGCCATCTaGCCGCTTGACATTAAAGTC +
Preference number: 4 (lower is better)
Translates to: LNVNQSSALESKVSYRVLDEGAI*PLDIKV
Trigger: GACTTTAATGTCAAGCGGGCAGATGGCACCCTCATC...GAGAACTCTGTAGCTTACCTTGGATTCCAGAGCAGAAGACTGGTTTACATTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp GATTTGGCAGATGGCCATAAAAGAAAGTATCCAGGGCCAGACATTAAACACCTGGAAGTGGACCATTTCTaGCAATTTCACCCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: DLADGHKRKYPGPDIKHLEVDHF*QFHPGL
Trigger: CAGCCCTGGGTGAAATTGGCAGAAATGGTCCACTTC...CAGGTGTTTAATGTCTGGCCCTGGATACTTTCTTTTATGGCCATCTGCCAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp CCACTTGGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTCATGGCCTGTCGAATaGCAAGGTTGGGATCAAACT +
Preference number: 4 (lower is better)
Translates to: PLGFSKNTTTSTPNEHGTSWPVE*QGWDQT
Trigger: AGTTTGATCCCAACCTTGGCATTCGACAGGCCATGA...AGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACCAAGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp TCTTTTAGTAACTATTTCTGCCAGTTTCCTTTACAACCACCCCTCAAACATCCAGGTTCTCTGGCCAGCTaGTCCTTTGGCAGGGTCACA +
Preference number: 4 (lower is better)
Translates to: SFSNYFCQFPLQPPLKHPGSLAS*SFGRVT
Trigger: TGTGACCCTGCCAAAGGAGCAGCTGGCCAGAGAACC...TGGATGTTTGAGGGGTGGTTGTAAAGGAAACTGGCAGAAATAGTTACTAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp GGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGGGAGTTTTTCAGTGCTaGTATCCCGTGAGGTCCGAA +
Preference number: 4 (lower is better)
Translates to: GFSKNTTTSTPNEHGTCLGVFQC*YPVRSE
Trigger: TTCGGACCTCACGGGATAGCAGCACTGAAAAACTCC...CAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp CTTGGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTGGAGTTTTTCAGTGCTaGTATCCCGTGAGGTCCGAA +
Preference number: 4 (lower is better)
Translates to: LGFSKNTTTSTPNEHGTCGVFQC*YPVRSE
Trigger: TTCGGACCTCACGGGATAGCAGCACTGAAAAACTCC...ACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACCAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp CAGATGGCCATAAAAGAAAGTATCCAGGGCCAGACATTAAACACCTGGGTTCTGCCAGGTACGTTTTCCTaGCACACTTCGGTCCATAAA +
Preference number: 4 (lower is better)
Translates to: QMAIKESIQGQTLNTWVLPGTFS*HTSVHK
Trigger: TTTATGGACCGAAGTGTGGCAGGAAAACGTACCTGG...CAGAACCCAGGTGTTTAATGTCTGGCCCTGGATACTTTCTTTTATGGCCATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp TTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGTTTCCAGGCCTTGCAGCAATaGGGTCAGTATCATTCCGAG +
Preference number: 4 (lower is better)
Translates to: FQRTPPLQPPMNMALVCFQALQQ*GQYHSE
Trigger: CTCGGAATGATACTGACCGCATTGCTGCAAGGCCTG...GAAACAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000374383.1
CDS-3UTR GCA 90 bp TTTCCTCTTACCCTACACTTTCAGGCAGGGGCATGGGCAACAGAAGGAAGGAGGCAATTAGGAGCACTCTaGATTCAGATGTCAAACATT +
Preference number: 4 (lower is better)
Translates to: FPLTLHFQAGAWATEGRRQLGAL*IQMSNI
Trigger: AATGTTTGACATCTGAATGCAGAGTGCTCCTAATTG...CCTCCTTCCTTCTGTTGCCCATGCCCCTGCCTGAAAGTGTAGGGTAAGAGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp GTACCTCATCTTGGAAGTTTCTTGGGTAAGCCGGGGTTAGCACTGATTTGGCAGTGTAAACCAGTCTTCTaGTCTGGAATCCAAGGTAAG +
Preference number: 4 (lower is better)
Translates to: VPHLGSFLGKPGLALIWQCKPVF*SGIQGK
Trigger: CTTACCTTGGATTCCAGAGCAGAAGACTGGTTTACA...CTGCCAAATCAGTGCTAACCCCGGCTTACCCAAGAAACTTCCAAGATGAGGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp TTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGTTTGCCGTTGCCACACTGTaGCGTGTATCACTAGAGGCA +
Preference number: 4 (lower is better)
Translates to: FSKNTTTSTPNEHGTCLFAVATL*RVSLEA
Trigger: TGCCTCTAGTGATACACGCCACAGTGTGGCAACGGC...AAACAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp CAGATGGCCATAAAAGAAAGTATCCAGGGCCAGACATTAAACACCTGGGTTCTGCTAGAGCGGAGGAGATaGGGGACAATCTTTAACTTG +
Preference number: 4 (lower is better)
Translates to: QMAIKESIQGQTLNTWVLLERRR*GTIFNL
Trigger: CAAGTTAAAGATTGTCCCCCATCTCCTCCGCTCTAG...CAGAACCCAGGTGTTTAATGTCTGGCCCTGGATACTTTCTTTTATGGCCATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp GATTTGGCAGATGGCCATAAAAGAAAGTATCCAGGGCCAGACATTAAACACCTGACACCACCTGAATGTTaGCTGGGAACGTTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: DLADGHKRKYPGPDIKHLTPPEC*LGTFQQ
Trigger: CTGCTGAAACGTTCCCAGCCAACATTCAGGTGGTGT...CAGGTGTTTAATGTCTGGCCCTGGATACTTTCTTTTATGGCCATCTGCCAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp TTTACAACCACCCCTCAAACATCCAAGGTTCCATTAAGCTCACTCAGCCCAGATCTCTCCAAAGGCTGCTaGGTTAAATGGAAGGACAGT +
Preference number: 4 (lower is better)
Translates to: FTTTPQTSKVPLSSLSPDLSKGC*VKWKDS
Trigger: ACTGTCCTTCCATTTAACCCAGCAGCCTTTGGAGAG...ATCTGGGCTGAGTGAGCTTAATGGAACCTTGGATGTTTGAGGGGTGGTTGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp GGGCATGGGCAACAGAAGGAAGGAGGAAAACCCCTAGTGGCAATGATTTACTTGGACTTCACTTCTTTGTaGGTACTTAGCTTCCTGACA +
Preference number: 4 (lower is better)
Translates to: GHGQQKEGGKPLVAMIYLDFTSL*VLSFLT
Trigger: TGTCAGGAAGCTAAGTACCCACAAAGAAGTGAAGTC...CAAGTAAATCATTGCCACTAGGGGTTTTCCTCCTTCCTTCTGTTGCCCATGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp AGGAAGACGATTGGAATTATCCGAAGGAGACTGACTCTGTCCTCTCCATCTGTATACACCAGATCTGGCTaGCTAAGATCACTTGCCAGA +
Preference number: 4 (lower is better)
Translates to: RKTIGIIRRRLTLSSPSVYTRSG*LRSLAR
Trigger: TCTGGCAAGTGATCTTAGCCAGCCAGATCTGGTGTA...TACAGATGGAGAGGACAGAGTCAGTCTCCTTCGGATAATTCCAATCGTCTTCCT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp CCACTTGGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTACACCAGATCTGGCTaGCTAAGATCACTTGCCAGA +
Preference number: 4 (lower is better)
Translates to: PLGFSKNTTTSTPNEHGTYTRSG*LRSLAR
Trigger: TCTGGCAAGTGATCTTAGCCAGCCAGATCTGGTGTA...AGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACCAAGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp TTAACGTCAATAAGGATGAGTACTGAATGTAAACCAGTCTTCTGCTCTGGAATCGCAGCGATGGTTCTCTaGCCAGCTGCTCCTTTGGCA +
Preference number: 4 (lower is better)
Translates to: LTSIRMSTECKPVFCSGIAAMVL*PAAPLA
Trigger: TGCCAAAGGAGCAGCTGGCCAGAGAACCATCGCTGC...GATTCCAGAGCAGAAGACTGGTTTACATTCAGTACTCATCCTTATTGACGTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp CAGATGGCCATAAAAGAAAGTATCCAGGGCCAGACATTAAACACCTGGGTTCTGATGGCAATTGCACCCTaGGCTTTCATTTTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: QMAIKESIQGQTLNTWVLMAIAP*AFIFQD
Trigger: GTCCTGGAAAATGAAAGCCCAGGGTGCAATTGCCAT...CAGAACCCAGGTGTTTAATGTCTGGCCCTGGATACTTTCTTTTATGGCCATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp TTTACAACCACCCCTCAAACATCCAAGGTTCCATTAAGCTCACTCAGCCCAGATTTGCAATTGATGCCATaGCAATTGCACCCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: FTTTPQTSKVPLSSLSPDLQLMP*QLHPGL
Trigger: AAGCCCAGGGTGCAATTGCCATGGCATCAATTGCAA...ATCTGGGCTGAGTGAGCTTAATGGAACCTTGGATGTTTGAGGGGTGGTTGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp CCACTTGGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTTGCAATTGATGCCATaGCAATTGCACCCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: PLGFSKNTTTSTPNEHGTLQLMP*QLHPGL
Trigger: AAGCCCAGGGTGCAATTGCCATGGCATCAATTGCAA...AGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACCAAGTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000374383.1
CDS-3UTR CCA 90 bp AGGAAGACGATTGGAATTATCCGAAGGAGACTGACTCTGTCCTCTCCATCTGTATTGTGCTGGGTTGATTaGGCACAGACTTTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: RKTIGIIRRRLTLSSPSVLCWVD*AQTFPA
Trigger: AGCTGGAAAAGTCTGTGCCCAATCAACCCAGCACAA...TACAGATGGAGAGGACAGAGTCAGTCTCCTTCGGATAATTCCAATCGTCTTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp CTGAATGTAAACCAGTCTTCTGCTCTGGAATCCAAGGTAAGCTACAGAGTTCTCTCTCCTCTTCATTTTTaGTTGTCCGGACCCCACTGC +
Preference number: 4 (lower is better)
Translates to: LNVNQSSALESKVSYRVLSPLHF*LSGPHC
Trigger: GCAGTGGGGTCCGGACAACCAAAAATGAAGAGGAGA...GAGAACTCTGTAGCTTACCTTGGATTCCAGAGCAGAAGACTGGTTTACATTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR TCA 90 bp CAGATGGCCATAAAAGAAAGTATCCAGGGCCAGACATTAAACACCTGGGTTCTGTCCCGGTCATGTACTTaGCTGGAGTTTTCATTCGAT +
Preference number: 4 (lower is better)
Translates to: QMAIKESIQGQTLNTWVLSRSCT*LEFSFD
Trigger: ATCGAATGAAAACTCCAGTCAAGTACATGACCGGGA...CAGAACCCAGGTGTTTAATGTCTGGCCCTGGATACTTTCTTTTATGGCCATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR TCA 90 bp GTACCTCATCTTGGAAGTTTCTTGGGTAAGCCGGGGTTAGCACTGATTTGGCAGTGTACTGTCCAAAAATaGGCCTATTGTTTCTGTAGC +
Preference number: 4 (lower is better)
Translates to: VPHLGSFLGKPGLALIWQCTVQK*AYCFCS
Trigger: GCTACAGAAACAATAGGCTCATTTTTGGACAGTACA...CTGCCAAATCAGTGCTAACCCCGGCTTACCCAAGAAACTTCCAAGATGAGGTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR TCA 90 bp GATTTGGCAGATGGCCATAAAAGAAAGTATCCAGGGCCAGACATTAAACACCTGTCGCCAATAGTGAACTaGAGTTCTATCTGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: DLADGHKRKYPGPDIKHLSPIVN*SSICLA
Trigger: GGCCAAGCAGATAGAACTTCAGTTCACTATTGGCGA...CAGGTGTTTAATGTCTGGCCCTGGATACTTTCTTTTATGGCCATCTGCCAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR TCA 90 bp TTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGTTTCCAACCCAAGGCCCTTTaGTGCAACATCTTGGCTAAG +
Preference number: 4 (lower is better)
Translates to: FQRTPPLQPPMNMALVCFQPKAL*CNILAK
Trigger: CTTAGCCAAGATGTTGCATCAAAGGGCCTTGGGTTG...GAAACAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR TCA 90 bp AGGAAGACGATTGGAATTATCCGAAGGAGACTGACTCTGTCCTCTCCATCTGTAAGTCTGTTTTGCAATTaGTGCCATGGCAATTGCACC +
Preference number: 4 (lower is better)
Translates to: RKTIGIIRRRLTLSSPSVSLFCN*CHGNCT
Trigger: GGTGCAATTGCCATGGCATCAATTGCAAAACAGACT...TACAGATGGAGAGGACAGAGTCAGTCTCCTTCGGATAATTCCAATCGTCTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR TCA 90 bp AGGAAGACGATTGGAATTATCCGAAGGAGACTGACTCTGTCCTCTCCATCTGTACACTTCAACCCCCAATaGACATGGCACTTGTTTGTT +
Preference number: 4 (lower is better)
Translates to: RKTIGIIRRRLTLSSPSVHFNPQ*TWHLFV
Trigger: AACAAACAAGTGCCATGTTCATTGGGGGTTGAAGTG...TACAGATGGAGAGGACAGAGTCAGTCTCCTTCGGATAATTCCAATCGTCTTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp CTATTTCTGCCAGTTTCCTTTACAACCACCCCTCAAACATCCAAGGTTCCATTATGTGACAAAGGAAACTaGAGCAGGGTCCTGGTACTG +
Preference number: 4 (lower is better)
Translates to: LFLPVSFTTTPQTSKVPLCDKGN*SRVLVL
Trigger: CAGTACCAGGACCCTGCTGCAGTTTCCTTTGTCACA...TAATGGAACCTTGGATGTTTGAGGGGTGGTTGTAAAGGAAACTGGCAGAAATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp CTGAATGTAAACCAGTCTTCTGCTCTGGAATCCAAGGTAAGCTACAGAGTTCTCAGGGCTTCAAAAAGCTaGTGCACAAGCGCTATATCC +
Preference number: 4 (lower is better)
Translates to: LNVNQSSALESKVSYRVLRASKS*CTSAIS
Trigger: GGATATAGCGCTTGTGCAGCAGCTTTTTGAAGCCCT...GAGAACTCTGTAGCTTACCTTGGATTCCAGAGCAGAAGACTGGTTTACATTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp TTTACAACCACCCCTCAAACATCCAAGGTTCCATTAAGCTCACTCAGCCCAGATTCTCAGGCTCTTCCTTaGAAAGGGCTTCAAAAAGCT +
Preference number: 4 (lower is better)
Translates to: FTTTPQTSKVPLSSLSPDSQALP*KGLQKA
Trigger: AGCTTTTTGAAGCCCTTTGCAAGGAAGAGCCTGAGA...ATCTGGGCTGAGTGAGCTTAATGGAACCTTGGATGTTTGAGGGGTGGTTGTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp TTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGTTTCGACCATCTGGTGTTTTaGCAAGAGCTCCCCCTTGAA +
Preference number: 4 (lower is better)
Translates to: FQRTPPLQPPMNMALVCFDHLVF*QELPLE
Trigger: TTCAAGGGGGAGCTCTTGGCAAAACACCAGATGGTC...GAAACAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp TGTTTAGCTTCTGGCTTTCAGAAACCCAATGGTAAGGGTCAGTTTAGTTCTGGCGAACTTCCGTCACGGTaGTCATCATTCCTTTGTCCA +
Preference number: 4 (lower is better)
Translates to: CLASGFQKPNGKGQFSSGELPSR*SSFLCP
Trigger: TGGACAAAGGAATGATGAGCACCGTGACGGAAGTTC...GCCAGAACTAAACTGACCCTTACCATTGGGTTTCTGAAAGCCAGAAGCTAAACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp TTTACAACCACCCCTCAAACATCCAAGGTTCCATTAAGCTCACTCAGCCCAGATATGAGTTTTGGTGCATaGGGTTTCAACATGGCTCCT +
Preference number: 4 (lower is better)
Translates to: FTTTPQTSKVPLSSLSPDMSFGA*GFNMAP
Trigger: AGGAGCCATGTTGAAACCGCATGCACCAAAACTCAT...ATCTGGGCTGAGTGAGCTTAATGGAACCTTGGATGTTTGAGGGGTGGTTGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp TGTTTAGCTTCTGGCTTTCAGAAACCCAATGGTAAGGGTCAGTTTAGTTCTGGCCACCCATTGAGCTTCTaGAGGAGTTTTTCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: CLASGFQKPNGKGQFSSGHPLSF*RSFSVL
Trigger: CAGCACTGAAAAACTCCTGCAGAAGCTCAATGGGTG...GCCAGAACTAAACTGACCCTTACCATTGGGTTTCTGAAAGCCAGAAGCTAAACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp GATTTGGCAGATGGCCATAAAAGAAAGTATCCAGGGCCAGACATTAAACACCTGCACCCATTGAGCTTCTaGAGGAGTTTTTCAGTGCTG +
Preference number: 4 (lower is better)
Translates to: DLADGHKRKYPGPDIKHLHPLSF*RSFSVL
Trigger: CAGCACTGAAAAACTCCTGCAGAAGCTCAATGGGTG...CAGGTGTTTAATGTCTGGCCCTGGATACTTTCTTTTATGGCCATCTGCCAAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp AGGAAGACGATTGGAATTATCCGAAGGAGACTGACTCTGTCCTCTCCATCTGTAGCAGGTATAATCGAATaGCACCAAAGGATCCAGGTA +
Preference number: 4 (lower is better)
Translates to: RKTIGIIRRRLTLSSPSVAGIIE*HQRIQV
Trigger: TACCTGGATCCTTTGGTGGCATTCGATTATACCTGC...TACAGATGGAGAGGACAGAGTCAGTCTCCTTCGGATAATTCCAATCGTCTTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp TTAACGTCAATAAGGATGAGTACTGAATGTAAACCAGTCTTCTGCTCTGGAATCCTTCCAGCCAGGCCTTaGAGCAATGCGGTCAGTATC +
Preference number: 4 (lower is better)
Translates to: LTSIRMSTECKPVFCSGILPARP*SNAVSI
Trigger: GATACTGACCGCATTGCTGCAAGGCCTGGCTGGAAG...GATTCCAGAGCAGAAGACTGGTTTACATTCAGTACTCATCCTTATTGACGTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp TTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGTTTTTTCCAGCTCTGCACTaGAAGCTGTCACCACACAGG +
Preference number: 4 (lower is better)
Translates to: FSKNTTTSTPNEHGTCLFFPALH*KLSPHR
Trigger: CCTGTGTGGTGACAGCTTGCAGTGCAGAGCTGGAAA...AAACAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAA
46% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000374383.1
CDS-3UTR GCA 90 bp GTACCTCATCTTGGAAGTTTCTTGGGTAAGCCGGGGTTAGCACTGATTTGGCAGAGCTGCACAGCTGATTaGTACAATCTTGTATTTGAC +
Preference number: 4 (lower is better)
Translates to: VPHLGSFLGKPGLALIWQSCTAD*YNLVFD
Trigger: GTCAAATACAAGATTGTAGCAATCAGCTGTGCAGCT...CTGCCAAATCAGTGCTAACCCCGGCTTACCCAAGAAACTTCCAAGATGAGGTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp GGGCATGGGCAACAGAAGGAAGGAGGAAAACCCCTAGTGGCAATGATTTACTTGCTTCAAGATATCAGCTaGACAGCTGATTGCTACAAT +
Preference number: 4 (lower is better)
Translates to: GHGQQKEGGKPLVAMIYLLQDIS*TADCYN
Trigger: ATTGTAGCAATCAGCTGTGCAGCTGATATCTTGAAG...CAAGTAAATCATTGCCACTAGGGGTTTTCCTCCTTCCTTCTGTTGCCCATGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp GATTTGGCAGATGGCCATAAAAGAAAGTATCCAGGGCCAGACATTAAACACCTGTTGTCCGGACCCCACTaGTTTCAAGTGAGTTCTTCT +
Preference number: 4 (lower is better)
Translates to: DLADGHKRKYPGPDIKHLLSGPH*FQVSSS
Trigger: AGAAGAACTCACTTGAAAGCAGTGGGGTCCGGACAA...CAGGTGTTTAATGTCTGGCCCTGGATACTTTCTTTTATGGCCATCTGCCAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp TTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGTTTTGCAGGACTCCTAGCTaGACTTTCCACGTGCTGAGT +
Preference number: 4 (lower is better)
Translates to: FSKNTTTSTPNEHGTCLFCRTPS*TFHVLS
Trigger: ACTCAGCACGTGGAAAGTGCAGCTAGGAGTCCTGCA...AAACAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp GGGCATGGGCAACAGAAGGAAGGAGGAAAACCCCTAGTGGCAATGATTTACTTGGCTGAAGATGAATTTTaGCGACTCTGGGATTCATTT +
Preference number: 4 (lower is better)
Translates to: GHGQQKEGGKPLVAMIYLAEDEF*RLWDSF
Trigger: AAATGAATCCCAGAGTCGCCAAAATTCATCTTCAGC...CAAGTAAATCATTGCCACTAGGGGTTTTCCTCCTTCCTTCTGTTGCCCATGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp CTGAATGTAAACCAGTCTTCTGCTCTGGAATCCAAGGTAAGCTACAGAGTTCTCAATGTGGCATCCGACTaGAGAGTTTTCCAACAGCTG +
Preference number: 4 (lower is better)
Translates to: LNVNQSSALESKVSYRVLNVASD*RVFQQL
Trigger: CAGCTGTTGGAAAACTCTCCAGTCGGATGCCACATT...GAGAACTCTGTAGCTTACCTTGGATTCCAGAGCAGAAGACTGGTTTACATTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp TTTACAACCACCCCTCAAACATCCAAGGTTCCATTAAGCTCACTCAGCCCAGATTCAAAGCTAAACAGCTaGATTCTCGAACTCGCCACA +
Preference number: 4 (lower is better)
Translates to: FTTTPQTSKVPLSSLSPDSKLNS*ILELAT
Trigger: TGTGGCGAGTTCGAGAATCCAGCTGTTTAGCTTTGA...ATCTGGGCTGAGTGAGCTTAATGGAACCTTGGATGTTTGAGGGGTGGTTGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp AGGAAGACGATTGGAATTATCCGAAGGAGACTGACTCTGTCCTCTCCATCTGTAGAGGTCCGAACTAAATaGCCCATAGCAAATGCACAA +
Preference number: 4 (lower is better)
Translates to: RKTIGIIRRRLTLSSPSVEVRTK*PIANAQ
Trigger: TTGTGCATTTGCTATGGGCCATTTAGTTCGGACCTC...TACAGATGGAGAGGACAGAGTCAGTCTCCTTCGGATAATTCCAATCGTCTTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp CAGATGGCCATAAAAGAAAGTATCCAGGGCCAGACATTAAACACCTGGGTTCTGGAGGTCCGAACTAAATaGCCCATAGCAAATGCACAA +
Preference number: 4 (lower is better)
Translates to: QMAIKESIQGQTLNTWVLEVRTK*PIANAQ
Trigger: TTGTGCATTTGCTATGGGCCATTTAGTTCGGACCTC...CAGAACCCAGGTGTTTAATGTCTGGCCCTGGATACTTTCTTTTATGGCCATCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp CTTGGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGTGCTGGGTTGATTaGGCACAGACTTTTCCAGCT +
Preference number: 4 (lower is better)
Translates to: LGFSKNTTTSTPNEHGTCLCWVD*AQTFPA
Trigger: AGCTGGAAAAGTCTGTGCCCAATCAACCCAGCACAA...ACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000374383.1
CDS-3UTR TCA 90 bp GATTTGGCAGATGGCCATAAAAGAAAGTATCCAGGGCCAGACATTAAACACCTGTCCCGGTCATGTACTTaGCTGGAGTTTTCATTCGAT +
Preference number: 4 (lower is better)
Translates to: DLADGHKRKYPGPDIKHLSRSCT*LEFSFD
Trigger: ATCGAATGAAAACTCCAGTCAAGTACATGACCGGGA...CAGGTGTTTAATGTCTGGCCCTGGATACTTTCTTTTATGGCCATCTGCCAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR TCA 90 bp CTATTTCTGCCAGTTTCCTTTACAACCACCCCTCAAACATCCAAGGTTCCATTAAAGAGGAGTTTCTGGTaGGGAAAATCTCCATCCCCA +
Preference number: 4 (lower is better)
Translates to: LFLPVSFTTTPQTSKVPLKRSFW*GKSPSP
Trigger: TGGGGATGGAGATTTTCCTCACCAGAAACTCCTCTT...TAATGGAACCTTGGATGTTTGAGGGGTGGTTGTAAAGGAAACTGGCAGAAATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR TCA 90 bp TCTTTTAGTAACTATTTCTGCCAGTTTCCTTTACAACCACCCCTCAAACATCCACCAAGAGCTCCCCCTTaGAATACCACTGTCTCTCCA +
Preference number: 4 (lower is better)
Translates to: SFSNYFCQFPLQPPLKHPPRAPP*NTTVSP
Trigger: TGGAGAGACAGTGGTATTTCAAGGGGGAGCTCTTGG...TGGATGTTTGAGGGGTGGTTGTAAAGGAAACTGGCAGAAATAGTTACTAAAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR TCA 90 bp GGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGCCATGGATTTGTCAGTaGCCAACGCATTCCAAATAC +
Preference number: 4 (lower is better)
Translates to: GFSKNTTTSTPNEHGTCLPWICQ*PTHSKY
Trigger: GTATTTGGAATGCGTTGGTCACTGACAAATCCATGG...CAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR TCA 90 bp CAGATGGCCATAAAAGAAAGTATCCAGGGCCAGACATTAAACACCTGGGTTCTGATTGCAGGCACATGTTaGTTGTTTCCATCATTGGAG +
Preference number: 4 (lower is better)
Translates to: QMAIKESIQGQTLNTWVLIAGTC*LFPSLE
Trigger: CTCCAATGATGGAAACAATCAACATGTGCCTGCAAT...CAGAACCCAGGTGTTTAATGTCTGGCCCTGGATACTTTCTTTTATGGCCATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR TCA 90 bp CTATTTCTGCCAGTTTCCTTTACAACCACCCCTCAAACATCCAAGGTTCCATTATCATTTGTGCTGGGTTaGTTGGGCACAGACTTTTCC +
Preference number: 4 (lower is better)
Translates to: LFLPVSFTTTPQTSKVPLSFVLG*LGTDFS
Trigger: GGAAAAGTCTGTGCCCAATCAACCCAGCACAAATGA...TAATGGAACCTTGGATGTTTGAGGGGTGGTTGTAAAGGAAACTGGCAGAAATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR TCA 90 bp TTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGTTTCTCATTTGTGCTGGGTTaGTTGGGCACAGACTTTTCC +
Preference number: 4 (lower is better)
Translates to: FQRTPPLQPPMNMALVCFSFVLG*LGTDFS
Trigger: GGAAAAGTCTGTGCCCAATCAACCCAGCACAAATGA...GAAACAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000374383.1
CDS-3UTR TCA 90 bp TTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGTTTCCCCACTGCTTTCAAGTaGGTTCTTCTTGATGAGAGG +
Preference number: 4 (lower is better)
Translates to: FQRTPPLQPPMNMALVCFPTAFK*VLLDER
Trigger: CCTCTCATCAAGAAGAACTCACTTGAAAGCAGTGGG...GAAACAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR TCA 90 bp TTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGTTTGCACTTTCCACGTGCTaGGTTTTAGCCGTTCACACA +
Preference number: 4 (lower is better)
Translates to: FSKNTTTSTPNEHGTCLFALSTC*VLAVHT
Trigger: TGTGTGAACGGCTAAAACTCAGCACGTGGAAAGTGC...AAACAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp TTTACAACCACCCCTCAAACATCCAAGGTTCCATTAAGCTCACTCAGCCCAGATAATAACTCGTTTGGCTaGATAAAAGCTCATTCCCGG +
Preference number: 4 (lower is better)
Translates to: FTTTPQTSKVPLSSLSPDNNSFG*IKAHSR
Trigger: CCGGGAATGAGCTTTTATGCAGCCAAACGAGTTATT...ATCTGGGCTGAGTGAGCTTAATGGAACCTTGGATGTTTGAGGGGTGGTTGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp TTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGTTTTTTCAATTCCAGGTCTaGTGCCGTTGCCACACTGTG +
Preference number: 4 (lower is better)
Translates to: FSKNTTTSTPNEHGTCLFFQFQV*CRCHTV
Trigger: CACAGTGTGGCAACGGCAGCAGACCTGGAATTGAAA...AAACAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp CTATTTCTGCCAGTTTCCTTTACAACCACCCCTCAAACATCCAAGGTTCCATTACTCTGGCTTCAGAACTaGACCCTCTTTTGTCTTCAG +
Preference number: 4 (lower is better)
Translates to: LFLPVSFTTTPQTSKVPLLWLQN*TLFCLQ
Trigger: CTGAAGACAAAAGAGGGTGCAGTTCTGAAGCCAGAG...TAATGGAACCTTGGATGTTTGAGGGGTGGTTGTAAAGGAAACTGGCAGAAATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp TGTTTAGCTTCTGGCTTTCAGAAACCCAATGGTAAGGGTCAGTTTAGTTCTGGCTCTCAGGCTCTTCCTTaGAAAGGGCTTCAAAAAGCT +
Preference number: 4 (lower is better)
Translates to: CLASGFQKPNGKGQFSSGSQALP*KGLQKA
Trigger: AGCTTTTTGAAGCCCTTTGCAAGGAAGAGCCTGAGA...GCCAGAACTAAACTGACCCTTACCATTGGGTTTCTGAAAGCCAGAAGCTAAACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp GGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGGCAGGTATAATCGAATaGCACCAAAGGATCCAGGTA +
Preference number: 4 (lower is better)
Translates to: GFSKNTTTSTPNEHGTCLAGIIE*HQRIQV
Trigger: TACCTGGATCCTTTGGTGGCATTCGATTATACCTGC...CAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp GATTTGGCAGATGGCCATAAAAGAAAGTATCCAGGGCCAGACATTAAACACCTGGTTCACACATCAGTTTaGACAGCTCCTGACGATAAC +
Preference number: 4 (lower is better)
Translates to: DLADGHKRKYPGPDIKHLVHTSV*TAPDDN
Trigger: GTTATCGTCAGGAGCTGTGCAAACTGATGTGTGAAC...CAGGTGTTTAATGTCTGGCCCTGGATACTTTCTTTTATGGCCATCTGCCAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp GGGCATGGGCAACAGAAGGAAGGAGGAAAACCCCTAGTGGCAATGATTTACTTGCAATTAGGAGCACTCTaGATTCAGATGTCAAACATT +
Preference number: 4 (lower is better)
Translates to: GHGQQKEGGKPLVAMIYLQLGAL*IQMSNI
Trigger: AATGTTTGACATCTGAATGCAGAGTGCTCCTAATTG...CAAGTAAATCATTGCCACTAGGGGTTTTCCTCCTTCCTTCTGTTGCCCATGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp TTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGTTTCCCAAAGGAAGAGACGTaGACTCAGAAAAGTAGAGCC +
Preference number: 4 (lower is better)
Translates to: FQRTPPLQPPMNMALVCFPKEET*TQKSRA
Trigger: GGCTCTACTTTTCTGAGTCCACGTCTCTTCCTTTGG...GAAACAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259335.8
CDS-3UTR CCA 90 bp TGTTTAGCTTCTGGCTTTCAGAAACCCAATGGTAAGGGTCAGTTTAGTTCTGGCTTACGTACTCCTTCTTaGGTGCTAGAGAGTTTGAGC +
Preference number: 4 (lower is better)
Translates to: CLASGFQKPNGKGQFSSGLRTPS*VLESLS
Trigger: GCTCAAACTCTCTAGCACCCAAGAAGGAGTACGTAA...GCCAGAACTAAACTGACCCTTACCATTGGGTTTCTGAAAGCCAGAAGCTAAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp TGTTTAGCTTCTGGCTTTCAGAAACCCAATGGTAAGGGTCAGTTTAGTTCTGGCCAACAGTGTCTCTACTaGAAGTTGTATTTTGGGGCG +
Preference number: 4 (lower is better)
Translates to: CLASGFQKPNGKGQFSSGQQCLY*KLYFGA
Trigger: CGCCCCAAAATACAACTTCCAGTAGAGACACTGTTG...GCCAGAACTAAACTGACCCTTACCATTGGGTTTCTGAAAGCCAGAAGCTAAACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp TTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGTTTACACCACCTGAATGTTaGCTGGGAACGTTTCAGCAG +
Preference number: 4 (lower is better)
Translates to: FSKNTTTSTPNEHGTCLFTPPEC*LGTFQQ
Trigger: CTGCTGAAACGTTCCCAGCCAACATTCAGGTGGTGT...AAACAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp GGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGAGGGAAACACCGTACTaGCAAATTTCACAGCCACTT +
Preference number: 4 (lower is better)
Translates to: GFSKNTTTSTPNEHGTCLRETPY*QISQPL
Trigger: AAGTGGCTGTGAAATTTGCCAGTACGGTGTTTCCCT...CAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp TTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGTTTCCTCTCCAAAGGCTGCTaGGTTAAATGGAAGGACAGT +
Preference number: 4 (lower is better)
Translates to: FQRTPPLQPPMNMALVCFLSKGC*VKWKDS
Trigger: ACTGTCCTTCCATTTAACCCAGCAGCCTTTGGAGAG...GAAACAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp GGAATCCAAGGTAAGCTACAGAGTTCTCAGTTTACCATCAACACTAAGGTTTTATCCCTCACTGGGGATTaGAAGTGGACCATTTCTGCC +
Preference number: 4 (lower is better)
Translates to: GIQGKLQSSQFTINTKVLSLTGD*KWTISA
Trigger: GGCAGAAATGGTCCACTTCCAATCCCCAGTGAGGGA...TAAAACCTTAGTGTTGATGGTAAACTGAGAACTCTGTAGCTTACCTTGGATTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp GGAATCCAAGGTAAGCTACAGAGTTCTCAGTTTACCATCAACACTAAGGTTTTAAGCCAGATCCCTCACTaGGGATTGGAAGTGGACCAT +
Preference number: 4 (lower is better)
Translates to: GIQGKLQSSQFTINTKVLSQIPH*GLEVDH
Trigger: ATGGTCCACTTCCAATCCCCAGTGAGGGATCTGGCT...TAAAACCTTAGTGTTGATGGTAAACTGAGAACTCTGTAGCTTACCTTGGATTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp GTACCTCATCTTGGAAGTTTCTTGGGTAAGCCGGGGTTAGCACTGATTTGGCAGAAATATCCCAGTGTTTaGATTGCTCGTTCTTTCATC +
Preference number: 4 (lower is better)
Translates to: VPHLGSFLGKPGLALIWQKYPSV*IARSFI
Trigger: GATGAAAGAACGAGCAATCCAAACACTGGGATATTT...CTGCCAAATCAGTGCTAACCCCGGCTTACCCAAGAAACTTCCAAGATGAGGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp TTTACAACCACCCCTCAAACATCCAAGGTTCCATTAAGCTCACTCAGCCCAGATATCTCCATCCCCAACTaGAAAATATCCCAGTGTTTG +
Preference number: 4 (lower is better)
Translates to: FTTTPQTSKVPLSSLSPDISIPN*KISQCL
Trigger: CAAACACTGGGATATTTTCCAGTTGGGGATGGAGAT...ATCTGGGCTGAGTGAGCTTAATGGAACCTTGGATGTTTGAGGGGTGGTTGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp GGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGGAAGTTCTATCTGCTTaGCCTCCACAGAATCCATCA +
Preference number: 4 (lower is better)
Translates to: GFSKNTTTSTPNEHGTCLEVLSA*PPQNPS
Trigger: TGATGGATTCTGTGGAGGCCAAGCAGATAGAACTTC...CAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp TGTTTAGCTTCTGGCTTTCAGAAACCCAATGGTAAGGGTCAGTTTAGTTCTGGCGTCGAATGCCAAGGTTaGGATCAAACTGGTAACGAT +
Preference number: 4 (lower is better)
Translates to: CLASGFQKPNGKGQFSSGVECQG*DQTGND
Trigger: ATCGTTACCAGTTTGATCCCAACCTTGGCATTCGAC...GCCAGAACTAAACTGACCCTTACCATTGGGTTTCTGAAAGCCAGAAGCTAAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp CTGAATGTAAACCAGTCTTCTGCTCTGGAATCCAAGGTAAGCTACAGAGTTCTCTCAAAGCTAAACAGCTaGATTCTCGAACTCGCCACA +
Preference number: 4 (lower is better)
Translates to: LNVNQSSALESKVSYRVLSKLNS*ILELAT
Trigger: TGTGGCGAGTTCGAGAATCCAGCTGTTTAGCTTTGA...GAGAACTCTGTAGCTTACCTTGGATTCCAGAGCAGAAGACTGGTTTACATTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp TCTTTTAGTAACTATTTCTGCCAGTTTCCTTTACAACCACCCCTCAAACATCCAGGCCAGCTGCTCCTTTaGCAGGGTCACACATTTTCA +
Preference number: 4 (lower is better)
Translates to: SFSNYFCQFPLQPPLKHPGQLLL*QGHTFS
Trigger: TGAAAATGTGTGACCCTGCCAAAGGAGCAGCTGGCC...TGGATGTTTGAGGGGTGGTTGTAAAGGAAACTGGCAGAAATAGTTACTAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp CTATTTCTGCCAGTTTCCTTTACAACCACCCCTCAAACATCCAAGGTTCCATTAATGGCAATTGCACCCTaGGCTTTCATTTTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: LFLPVSFTTTPQTSKVPLMAIAP*AFIFQD
Trigger: GTCCTGGAAAATGAAAGCCCAGGGTGCAATTGCCAT...TAATGGAACCTTGGATGTTTGAGGGGTGGTTGTAAAGGAAACTGGCAGAAATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp CTATTTCTGCCAGTTTCCTTTACAACCACCCCTCAAACATCCAAGGTTCCATTATCACCACACAGGCAATaGCTTTCAATAGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: LFLPVSFTTTPQTSKVPLSPHRQ*LSIAPP
Trigger: AGGAGGAGCTATTGAAAGCCATTGCCTGTGTGGTGA...TAATGGAACCTTGGATGTTTGAGGGGTGGTTGTAAAGGAAACTGGCAGAAATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp TTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGTTTCTCACCACACAGGCAATaGCTTTCAATAGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: FQRTPPLQPPMNMALVCFSPHRQ*LSIAPP
Trigger: AGGAGGAGCTATTGAAAGCCATTGCCTGTGTGGTGA...GAAACAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000374383.1
CDS-3UTR CCA 90 bp TTTACAACCACCCCTCAAACATCCAAGGTTCCATTAAGCTCACTCAGCCCAGATATGTTAGAGAACTCCTaGAATCTGTCCTCTTTGGTG +
Preference number: 4 (lower is better)
Translates to: FTTTPQTSKVPLSSLSPDMLENS*NLSSLV
Trigger: CACCAAAGAGGACAGATTCCAGGAGTTCTCTAACAT...ATCTGGGCTGAGTGAGCTTAATGGAACCTTGGATGTTTGAGGGGTGGTTGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp TTTACAACCACCCCTCAAACATCCAAGGTTCCATTAAGCTCACTCAGCCCAGATAGCAGATATTCCAGCTaGAGCTCCTTTTCCTTTTCA +
Preference number: 4 (lower is better)
Translates to: FTTTPQTSKVPLSSLSPDSRYSS*SSFSFS
Trigger: TGAAAAGGAAAAGGAGCTCCAGCTGGAATATCTGCT...ATCTGGGCTGAGTGAGCTTAATGGAACCTTGGATGTTTGAGGGGTGGTTGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp TGTTTAGCTTCTGGCTTTCAGAAACCCAATGGTAAGGGTCAGTTTAGTTCTGGCCAGACATTAAACACCTaGGTTCTGACTTTGGCACAG +
Preference number: 4 (lower is better)
Translates to: CLASGFQKPNGKGQFSSGQTLNT*VLTLAQ
Trigger: CTGTGCCAAAGTCAGAACCCAGGTGTTTAATGTCTG...GCCAGAACTAAACTGACCCTTACCATTGGGTTTCTGAAAGCCAGAAGCTAAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp CCACTTGGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTGGGTTAGCACTGATTTaGCAGATGGCCATAAAAGAA +
Preference number: 4 (lower is better)
Translates to: PLGFSKNTTTSTPNEHGTGLALI*QMAIKE
Trigger: TTCTTTTATGGCCATCTGCCAAATCAGTGCTAACCC...AGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACCAAGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR TCA 90 bp CCACTTGGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTCCTGTTCAGCTTCTATaGATTTCACGATTCCCAATT +
Preference number: 4 (lower is better)
Translates to: PLGFSKNTTTSTPNEHGTPVQLL*ISRFPI
Trigger: AATTGGGAATCGTGAAATTCATAGAAGCTGAACAGG...AGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACCAAGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR TCA 90 bp TGTTTAGCTTCTGGCTTTCAGAAACCCAATGGTAAGGGTCAGTTTAGTTCTGGCGCCACTTGTCGAACTTaGACTTCAGGCTTTATTAAG +
Preference number: 4 (lower is better)
Translates to: CLASGFQKPNGKGQFSSGATCRT*TSGFIK
Trigger: CTTAATAAAGCCTGAAGTTCAAGTTCGACAAGTGGC...GCCAGAACTAAACTGACCCTTACCATTGGGTTTCTGAAAGCCAGAAGCTAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR TCA 90 bp TTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGTTTCGTTGTGCTTCTCCATaGACTTCTTCACGTGGATCT +
Preference number: 4 (lower is better)
Translates to: FSKNTTTSTPNEHGTCLFRCASP*TSSRGS
Trigger: AGATCCACGTGAAGAAGTTCATGGAGAAGCACAACG...AAACAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR TCA 90 bp CCACTTGGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTATTCCCCGACACTGTTaGTACCACTACAGAATAAAA +
Preference number: 4 (lower is better)
Translates to: PLGFSKNTTTSTPNEHGTIPRHC*YHYRIK
Trigger: TTTTATTCTGTAGTGGTATCAACAGTGTCGGGGAAT...AGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACCAAGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR TCA 90 bp TGTTTAGCTTCTGGCTTTCAGAAACCCAATGGTAAGGGTCAGTTTAGTTCTGGCTGTATCTCCGGGCTGTaGTTGTCTTTTGTAGTCTTT +
Preference number: 4 (lower is better)
Translates to: CLASGFQKPNGKGQFSSGCISGL*LSFVVF
Trigger: AAAGACTACAAAAGACAATCACAGCCCGGAGATACA...GCCAGAACTAAACTGACCCTTACCATTGGGTTTCTGAAAGCCAGAAGCTAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR TCA 90 bp CTATTTCTGCCAGTTTCCTTTACAACCACCCCTCAAACATCCAAGGTTCCATTACCATGGATTTGTCAGTaGCCAACGCATTCCAAATAC +
Preference number: 4 (lower is better)
Translates to: LFLPVSFTTTPQTSKVPLPWICQ*PTHSKY
Trigger: GTATTTGGAATGCGTTGGTCACTGACAAATCCATGG...TAATGGAACCTTGGATGTTTGAGGGGTGGTTGTAAAGGAAACTGGCAGAAATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR TCA 90 bp TCTTTTAGTAACTATTTCTGCCAGTTTCCTTTACAACCACCCCTCAAACATCCACTAGCAGAGCTGGAATaGGTTTTGGTGCATGCGGTT +
Preference number: 4 (lower is better)
Translates to: SFSNYFCQFPLQPPLKHPLAELE*VLVHAV
Trigger: AACCGCATGCACCAAAACTCATTCCAGCTCTGCTAG...TGGATGTTTGAGGGGTGGTTGTAAAGGAAACTGGCAGAAATAGTTACTAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR TCA 90 bp AGGAAGACGATTGGAATTATCCGAAGGAGACTGACTCTGTCCTCTCCATCTGTAAATGCACAAGATTTCTaGATCACACTGTTCCGATCT +
Preference number: 4 (lower is better)
Translates to: RKTIGIIRRRLTLSSPSVNAQDF*ITLFRS
Trigger: AGATCGGAACAGTGTGATTCAGAAATCTTGTGCATT...TACAGATGGAGAGGACAGAGTCAGTCTCCTTCGGATAATTCCAATCGTCTTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR TCA 90 bp TTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGTTTCAGTCTGTTTTGCAATTaGTGCCATGGCAATTGCACC +
Preference number: 4 (lower is better)
Translates to: FQRTPPLQPPMNMALVCFSLFCN*CHGNCT
Trigger: GGTGCAATTGCCATGGCATCAATTGCAAAACAGACT...GAAACAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000374383.1
CDS-3UTR TCA 90 bp GGAATCCAAGGTAAGCTACAGAGTTCTCAGTTTACCATCAACACTAAGGTTTTAGCACTTTCCACGTGCTaGGTTTTAGCCGTTCACACA +
Preference number: 4 (lower is better)
Translates to: GIQGKLQSSQFTINTKVLALSTC*VLAVHT
Trigger: TGTGTGAACGGCTAAAACTCAGCACGTGGAAAGTGC...TAAAACCTTAGTGTTGATGGTAAACTGAGAACTCTGTAGCTTACCTTGGATTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR TCA 90 bp TTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGTTTCCACTTCAACCCCCAATaGACATGGCACTTGTTTGTT +
Preference number: 4 (lower is better)
Translates to: FQRTPPLQPPMNMALVCFHFNPQ*TWHLFV
Trigger: AACAAACAAGTGCCATGTTCATTGGGGGTTGAAGTG...GAAACAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000374383.1
CDS-3UTR TCA 90 bp CTTGGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTAGAAAGCCTCTGAGATaGCACAGCTTCCTATTTCTT +
Preference number: 4 (lower is better)
Translates to: LGFSKNTTTSTPNEHGTCRKPLR*HSFLFL
Trigger: AAGAAATAGGAAGCTGTGTCATCTCAGAGGCTTTCT...ACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp GATTTGGCAGATGGCCATAAAAGAAAGTATCCAGGGCCAGACATTAAACACCTGAATAACTCGTTTGGCTaGATAAAAGCTCATTCCCGG +
Preference number: 4 (lower is better)
Translates to: DLADGHKRKYPGPDIKHLNNSFG*IKAHSR
Trigger: CCGGGAATGAGCTTTTATGCAGCCAAACGAGTTATT...CAGGTGTTTAATGTCTGGCCCTGGATACTTTCTTTTATGGCCATCTGCCAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp GATTTGGCAGATGGCCATAAAAGAAAGTATCCAGGGCCAGACATTAAACACCTGGCTTCAAAAAGCTGCTaGACAAGCGCTATATCCTTA +
Preference number: 4 (lower is better)
Translates to: DLADGHKRKYPGPDIKHLASKSC*TSAISL
Trigger: TAAGGATATAGCGCTTGTGCAGCAGCTTTTTGAAGC...CAGGTGTTTAATGTCTGGCCCTGGATACTTTCTTTTATGGCCATCTGCCAAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp GATTTGGCAGATGGCCATAAAAGAAAGTATCCAGGGCCAGACATTAAACACCTGGGGAAGGAAGGCATCTaGTCAGAAGTACTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: DLADGHKRKYPGPDIKHLGKEGI*SEVLSF
Trigger: AAAAGAAAGTACTTCTGAGCAGATGCCTTCCTTCCC...CAGGTGTTTAATGTCTGGCCCTGGATACTTTCTTTTATGGCCATCTGCCAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp TGTTTAGCTTCTGGCTTTCAGAAACCCAATGGTAAGGGTCAGTTTAGTTCTGGCAGAATAAAACAACGCTaGCAGTTCGCGCATTTCTTC +
Preference number: 4 (lower is better)
Translates to: CLASGFQKPNGKGQFSSGRIKQR*QFAHFF
Trigger: GAAGAAATGCGCGAACTGGCAGCGTTGTTTTATTCT...GCCAGAACTAAACTGACCCTTACCATTGGGTTTCTGAAAGCCAGAAGCTAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp GGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGAGAACTAGTTCCTATTaGAGCACTGGTAATGGCTTC +
Preference number: 4 (lower is better)
Translates to: GFSKNTTTSTPNEHGTCLRTSSY*STGNGF
Trigger: GAAGCCATTACCAGTGCTGCAATAGGAACTAGTTCT...CAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp GATTTGGCAGATGGCCATAAAAGAAAGTATCCAGGGCCAGACATTAAACACCTGAGAACTAGTTCCTATTaGAGCACTGGTAATGGCTTC +
Preference number: 4 (lower is better)
Translates to: DLADGHKRKYPGPDIKHLRTSSY*STGNGF
Trigger: GAAGCCATTACCAGTGCTGCAATAGGAACTAGTTCT...CAGGTGTTTAATGTCTGGCCCTGGATACTTTCTTTTATGGCCATCTGCCAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp GATTTGGCAGATGGCCATAAAAGAAAGTATCCAGGGCCAGACATTAAACACCTGCTGGCTAAGATCACTTaGCAGAGAACAAAGTTCCTT +
Preference number: 4 (lower is better)
Translates to: DLADGHKRKYPGPDIKHLLAKIT*QRTKFL
Trigger: AAGGAACTTTGTTCTCTGGCAAGTGATCTTAGCCAG...CAGGTGTTTAATGTCTGGCCCTGGATACTTTCTTTTATGGCCATCTGCCAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp GGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGTTTCAACATGGCTCCTaGACTTTTGCTGATCTTCAC +
Preference number: 4 (lower is better)
Translates to: GFSKNTTTSTPNEHGTCLFQHGS*TFADLH
Trigger: GTGAAGATCAGCAAAAGTGCAGGAGCCATGTTGAAA...CAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp CCACTTGGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTGACACATCAAGGTATTaGAGGCACATGTTGATTGTT +
Preference number: 4 (lower is better)
Translates to: PLGFSKNTTTSTPNEHGTDTSRY*RHMLIV
Trigger: AACAATCAACATGTGCCTGCAATACCTTGATGTGTC...AGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACCAAGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp AGGAAGACGATTGGAATTATCCGAAGGAGACTGACTCTGTCCTCTCCATCTGTAATGGCCCATAGCAAATaGACAAGATTTCTGAATCAC +
Preference number: 4 (lower is better)
Translates to: RKTIGIIRRRLTLSSPSVMAHSK*TRFLNH
Trigger: GTGATTCAGAAATCTTGTGCATTTGCTATGGGCCAT...TACAGATGGAGAGGACAGAGTCAGTCTCCTTCGGATAATTCCAATCGTCTTCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp CTTGGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTGAAGAATTTCATTTGTaGTGGGTTGATTGGGCACAG +
Preference number: 4 (lower is better)
Translates to: LGFSKNTTTSTPNEHGTCEEFHL*WVDWAQ
Trigger: CTGTGCCCAATCAACCCAGCACAAATGAAATTCTTC...ACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000374383.1
CDS-3UTR GCA 90 bp TTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGTTTCGTTCACACATCAGTTTaGACAGCTCCTGACGATAAC +
Preference number: 4 (lower is better)
Translates to: FQRTPPLQPPMNMALVCFVHTSV*TAPDDN
Trigger: GTTATCGTCAGGAGCTGTGCAAACTGATGTGTGAAC...GAAACAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp TTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGTTTCAAGGCATTCATTGATTaGAGGACTCCTAGCTGCACT +
Preference number: 4 (lower is better)
Translates to: FQRTPPLQPPMNMALVCFKAFID*RTPSCT
Trigger: AGTGCAGCTAGGAGTCCTGCAATCAATGAATGCCTT...GAAACAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp TTTACAACCACCCCTCAAACATCCAAGGTTCCATTAAGCTCACTCAGCCCAGATATACGTTTATTCAGATaGACCAGCAGTTCCATTACC +
Preference number: 4 (lower is better)
Translates to: FTTTPQTSKVPLSSLSPDIRLFR*TSSSIT
Trigger: GGTAATGGAACTGCTGGTCCATCTGAATAAACGTAT...ATCTGGGCTGAGTGAGCTTAATGGAACCTTGGATGTTTGAGGGGTGGTTGTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp AGGAAGACGATTGGAATTATCCGAAGGAGACTGACTCTGTCCTCTCCATCTGTAGCTGAAGATGAATTTTaGCGACTCTGGGATTCATTT +
Preference number: 4 (lower is better)
Translates to: RKTIGIIRRRLTLSSPSVAEDEF*RLWDSF
Trigger: AAATGAATCCCAGAGTCGCCAAAATTCATCTTCAGC...TACAGATGGAGAGGACAGAGTCAGTCTCCTTCGGATAATTCCAATCGTCTTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp GATTTGGCAGATGGCCATAAAAGAAAGTATCCAGGGCCAGACATTAAACACCTGTTGTTCAGGTGTCCATaGGTTATCACCAATAACTCG +
Preference number: 4 (lower is better)
Translates to: DLADGHKRKYPGPDIKHLLFRCP*VITNNS
Trigger: CGAGTTATTGGTGATAACCCATGGACACCTGAACAA...CAGGTGTTTAATGTCTGGCCCTGGATACTTTCTTTTATGGCCATCTGCCAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp GATTTGGCAGATGGCCATAAAAGAAAGTATCCAGGGCCAGACATTAAACACCTGGTAATAAACCATTTCTaGGAAGGAAGGCATCTGCTC +
Preference number: 4 (lower is better)
Translates to: DLADGHKRKYPGPDIKHLVINHF*EGRHLL
Trigger: GAGCAGATGCCTTCCTTCCCAGAAATGGTTTATTAC...CAGGTGTTTAATGTCTGGCCCTGGATACTTTCTTTTATGGCCATCTGCCAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp CTTGGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTGTAATAAACCATTTCTaGGAAGGAAGGCATCTGCTC +
Preference number: 4 (lower is better)
Translates to: LGFSKNTTTSTPNEHGTCVINHF*EGRHLL
Trigger: GAGCAGATGCCTTCCTTCCCAGAAATGGTTTATTAC...ACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp GATGCTAAACAATCATTTTCTCCAAATCAACCACCTAAACACATGACAAGACAAGTATGTAGCGCCCAATaGCTGGGGCATGATCCTGCA +
Preference number: 4 (lower is better)
Translates to: DAKQSFSPNQPPKHMTRQVCSAQ*LGHDPA
Trigger: TGCAGGATCATGCCCCAGCCATTGGGCGCTACATAC...TTGTCTTGTCATGTGTTTAGGTGGTTGATTTGGAGAAAATGATTGTTTAGCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp CTATTTCTGCCAGTTTCCTTTACAACCACCCCTCAAACATCCAAGGTTCCATTAACTGGGGATTGGAAGTaGACCATTTCTGCCAATTTC +
Preference number: 4 (lower is better)
Translates to: LFLPVSFTTTPQTSKVPLTGDWK*TISANF
Trigger: GAAATTGGCAGAAATGGTCCACTTCCAATCCCCAGT...TAATGGAACCTTGGATGTTTGAGGGGTGGTTGTAAAGGAAACTGGCAGAAATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp GATTTGGCAGATGGCCATAAAAGAAAGTATCCAGGGCCAGACATTAAACACCTGATCTCCATCCCCAACTaGAAAATATCCCAGTGTTTG +
Preference number: 4 (lower is better)
Translates to: DLADGHKRKYPGPDIKHLISIPN*KISQCL
Trigger: CAAACACTGGGATATTTTCCAGTTGGGGATGGAGAT...CAGGTGTTTAATGTCTGGCCCTGGATACTTTCTTTTATGGCCATCTGCCAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp TTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGTTTCCACATCATTCACTTTaGCTCCAGCAGGTGGAGTAT +
Preference number: 4 (lower is better)
Translates to: FSKNTTTSTPNEHGTCLFPHHSL*LQQVEY
Trigger: ATACTCCACCTGCTGGAGCCAAAGTGAATGATGTGG...AAACAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp CCACTTGGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTGATTGTTTCCATCATTaGAGAAGATTTGGCAGCACT +
Preference number: 4 (lower is better)
Translates to: PLGFSKNTTTSTPNEHGTDCFHH*RRFGST
Trigger: AGTGCTGCCAAATCTTCTCCAATGATGGAAACAATC...AGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACCAAGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp TTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGTTTATGGCAATTGCACCCTaGGCTTTCATTTTCCAGGAC +
Preference number: 4 (lower is better)
Translates to: FSKNTTTSTPNEHGTCLFMAIAP*AFIFQD
Trigger: GTCCTGGAAAATGAAAGCCCAGGGTGCAATTGCCAT...AAACAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000374383.1
CDS-3UTR CCA 90 bp TTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGTTTTCACCACACAGGCAATaGCTTTCAATAGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: FSKNTTTSTPNEHGTCLFSPHRQ*LSIAPP
Trigger: AGGAGGAGCTATTGAAAGCCATTGCCTGTGTGGTGA...AAACAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000374383.1
CDS-3UTR CCA 90 bp TGTTTAGCTTCTGGCTTTCAGAAACCCAATGGTAAGGGTCAGTTTAGTTCTGGCGAATTTCATTTGTGCTaGGTTGATTGGGCACAGACT +
Preference number: 4 (lower is better)
Translates to: CLASGFQKPNGKGQFSSGEFHLC*VDWAQT
Trigger: AGTCTGTGCCCAATCAACCCAGCACAAATGAAATTC...GCCAGAACTAAACTGACCCTTACCATTGGGTTTCTGAAAGCCAGAAGCTAAACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp CTTGGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTATGTTAGAGAACTCCTaGAATCTGTCCTCTTTGGTG +
Preference number: 4 (lower is better)
Translates to: LGFSKNTTTSTPNEHGTCMLENS*NLSSLV
Trigger: CACCAAAGAGGACAGATTCCAGGAGTTCTCTAACAT...ACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000374383.1
CDS-3UTR CCA 90 bp GGAATCCAAGGTAAGCTACAGAGTTCTCAGTTTACCATCAACACTAAGGTTTTATCTCCTCTTCATTTTTaGTTGTCCGGACCCCACTGC +
Preference number: 4 (lower is better)
Translates to: GIQGKLQSSQFTINTKVLSPLHF*LSGPHC
Trigger: GCAGTGGGGTCCGGACAACCAAAAATGAAGAGGAGA...TAAAACCTTAGTGTTGATGGTAAACTGAGAACTCTGTAGCTTACCTTGGATTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp GGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGAGCAGATATTCCAGCTaGAGCTCCTTTTCCTTTTCA +
Preference number: 4 (lower is better)
Translates to: GFSKNTTTSTPNEHGTCLSRYSS*SSFSFS
Trigger: TGAAAAGGAAAAGGAGCTCCAGCTGGAATATCTGCT...CAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR TCA 90 bp GATTTGGCAGATGGCCATAAAAGAAAGTATCCAGGGCCAGACATTAAACACCTGCCTGTTCAGCTTCTATaGATTTCACGATTCCCAATT +
Preference number: 4 (lower is better)
Translates to: DLADGHKRKYPGPDIKHLPVQLL*ISRFPI
Trigger: AATTGGGAATCGTGAAATTCATAGAAGCTGAACAGG...CAGGTGTTTAATGTCTGGCCCTGGATACTTTCTTTTATGGCCATCTGCCAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR TCA 90 bp GGAATCCAAGGTAAGCTACAGAGTTCTCAGTTTACCATCAACACTAAGGTTTTACGTTGTGCTTCTCCATaGACTTCTTCACGTGGATCT +
Preference number: 4 (lower is better)
Translates to: GIQGKLQSSQFTINTKVLRCASP*TSSRGS
Trigger: AGATCCACGTGAAGAAGTTCATGGAGAAGCACAACG...TAAAACCTTAGTGTTGATGGTAAACTGAGAACTCTGTAGCTTACCTTGGATTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR TCA 90 bp CTGAATGTAAACCAGTCTTCTGCTCTGGAATCCAAGGTAAGCTACAGAGTTCTCAAGCTGTTCTATCATTaGTTTCAACTCATTCCCCGA +
Preference number: 4 (lower is better)
Translates to: LNVNQSSALESKVSYRVLKLFYH*FQLIPR
Trigger: TCGGGGAATGAGTTGAAATCAATGATAGAACAGCTT...GAGAACTCTGTAGCTTACCTTGGATTCCAGAGCAGAAGACTGGTTTACATTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR TCA 90 bp CTTGGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTAAGCTGTTCTATCATTaGTTTCAACTCATTCCCCGA +
Preference number: 4 (lower is better)
Translates to: LGFSKNTTTSTPNEHGTCKLFYH*FQLIPR
Trigger: TCGGGGAATGAGTTGAAATCAATGATAGAACAGCTT...ACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR TCA 90 bp CTGAATGTAAACCAGTCTTCTGCTCTGGAATCCAAGGTAAGCTACAGAGTTCTCTGTACTGTCCAAAAATaGGCCTATTGTTTCTGTAGC +
Preference number: 4 (lower is better)
Translates to: LNVNQSSALESKVSYRVLCTVQK*AYCFCS
Trigger: GCTACAGAAACAATAGGCTCATTTTTGGACAGTACA...GAGAACTCTGTAGCTTACCTTGGATTCCAGAGCAGAAGACTGGTTTACATTCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR TCA 90 bp GGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGGAAACCAATTCCTGTTaGTCTTGTTCATTGCCTAGT +
Preference number: 4 (lower is better)
Translates to: GFSKNTTTSTPNEHGTCLETNSC*SCSLPS
Trigger: ACTAGGCAATGAACAAGATCAACAGGAATTGGTTTC...CAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR TCA 90 bp CTGAATGTAAACCAGTCTTCTGCTCTGGAATCCAAGGTAAGCTACAGAGTTCTCGAAACCAATTCCTGTTaGTCTTGTTCATTGCCTAGT +
Preference number: 4 (lower is better)
Translates to: LNVNQSSALESKVSYRVLETNSC*SCSLPS
Trigger: ACTAGGCAATGAACAAGATCAACAGGAATTGGTTTC...GAGAACTCTGTAGCTTACCTTGGATTCCAGAGCAGAAGACTGGTTTACATTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR TCA 90 bp CTTGGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTGAGTTCCACATTGCATaGTGGTTGGCTAAATTCATA +
Preference number: 4 (lower is better)
Translates to: LGFSKNTTTSTPNEHGTCEFHIA*WLAKFI
Trigger: TATGAATTTAGCCAACCATCATGCAATGTGGAACTC...ACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR TCA 90 bp TTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGTTTCATTGCAGGCACATGTTaGTTGTTTCCATCATTGGAG +
Preference number: 4 (lower is better)
Translates to: FQRTPPLQPPMNMALVCFIAGTC*LFPSLE
Trigger: CTCCAATGATGGAAACAATCAACATGTGCCTGCAAT...GAAACAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR TCA 90 bp GATTTGGCAGATGGCCATAAAAGAAAGTATCCAGGGCCAGACATTAAACACCTGAATGCACAAGATTTCTaGATCACACTGTTCCGATCT +
Preference number: 4 (lower is better)
Translates to: DLADGHKRKYPGPDIKHLNAQDF*ITLFRS
Trigger: AGATCGGAACAGTGTGATTCAGAAATCTTGTGCATT...CAGGTGTTTAATGTCTGGCCCTGGATACTTTCTTTTATGGCCATCTGCCAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR TCA 90 bp CTTGGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTATCGTCCAATAGCATaGATAGTCAAAGCACAAGAG +
Preference number: 4 (lower is better)
Translates to: LGFSKNTTTSTPNEHGTCYRPIA*IVKAQE
Trigger: CTCTTGTGCTTTGACTATTCATGCTATTGGACGATA...ACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR TCA 90 bp GGAATCCAAGGTAAGCTACAGAGTTCTCAGTTTACCATCAACACTAAGGTTTTATTCATTTTCCAGGACTaGGACTGCAAAGCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: GIQGKLQSSQFTINTKVLFIFQD*DCKAFW
Trigger: CCAGAAGGCTTTGCAGTCTCAGTCCTGGAAAATGAA...TAAAACCTTAGTGTTGATGGTAAACTGAGAACTCTGTAGCTTACCTTGGATTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR TCA 90 bp CTTGGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTATCAGCTGCACAGCTaGTTGCTACAATCTTGTATT +
Preference number: 4 (lower is better)
Translates to: LGFSKNTTTSTPNEHGTCYQLHS*LLQSCI
Trigger: AATACAAGATTGTAGCAATCAGCTGTGCAGCTGATA...ACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000374383.1
CDS-3UTR TCA 90 bp AGGAAGACGATTGGAATTATCCGAAGGAGACTGACTCTGTCCTCTCCATCTGTAATTTCAGCCAAGGAATaGTGCATGCTACAGATTAAT +
Preference number: 4 (lower is better)
Translates to: RKTIGIIRRRLTLSSPSVISAKE*CMLQIN
Trigger: ATTAATCTGTAGCATGCATCATTCCTTGGCTGAAAT...TACAGATGGAGAGGACAGAGTCAGTCTCCTTCGGATAATTCCAATCGTCTTCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp CAGATGGCCATAAAAGAAAGTATCCAGGGCCAGACATTAAACACCTGGGTTCTGTCCCAGTGTTTGGATTaGTCGTTCTTTCATCTTATT +
Preference number: 4 (lower is better)
Translates to: QMAIKESIQGQTLNTWVLSQCLD*SFFHLI
Trigger: AATAAGATGAAAGAACGAGCAATCCAAACACTGGGA...CAGAACCCAGGTGTTTAATGTCTGGCCCTGGATACTTTCTTTTATGGCCATCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp GATGCTAAACAATCATTTTCTCCAAATCAACCACCTAAACACATGACAAGACAAAGAAAAGGAGCCAGCTaGTCTCCAGCTCTGGTAGCA +
Preference number: 4 (lower is better)
Translates to: DAKQSFSPNQPPKHMTRQRKGAS*SPALVA
Trigger: TGCTACCAGAGCTGGAGAGCAGCTGGCTCCTTTTCT...TTGTCTTGTCATGTGTTTAGGTGGTTGATTTGGAGAAAATGATTGTTTAGCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp GGAATCCAAGGTAAGCTACAGAGTTCTCAGTTTACCATCAACACTAAGGTTTTATCATGGCCTGTCGAATaGCAAGGTTGGGATCAAACT +
Preference number: 4 (lower is better)
Translates to: GIQGKLQSSQFTINTKVLSWPVE*QGWDQT
Trigger: AGTTTGATCCCAACCTTGGCATTCGACAGGCCATGA...TAAAACCTTAGTGTTGATGGTAAACTGAGAACTCTGTAGCTTACCTTGGATTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp GGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGTTTTCACACAGACCTTaGTCAGAGTTTTCAGAGCTA +
Preference number: 4 (lower is better)
Translates to: GFSKNTTTSTPNEHGTCLFSHRP*SEFSEL
Trigger: TAGCTCTGAAAACTCTGAGCAAGGTCTGTGTGAAAA...CAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp TTAACGTCAATAAGGATGAGTACTGAATGTAAACCAGTCTTCTGCTCTGGAATCGAACTTCCGTCACGGTaGTCATCATTCCTTTGTCCA +
Preference number: 4 (lower is better)
Translates to: LTSIRMSTECKPVFCSGIELPSR*SSFLCP
Trigger: TGGACAAAGGAATGATGAGCACCGTGACGGAAGTTC...GATTCCAGAGCAGAAGACTGGTTTACATTCAGTACTCATCCTTATTGACGTTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp CTATTTCTGCCAGTTTCCTTTACAACCACCCCTCAAACATCCAAGGTTCCATTATTTCAACATGGCTCCTaGACTTTTGCTGATCTTCAC +
Preference number: 4 (lower is better)
Translates to: LFLPVSFTTTPQTSKVPLFQHGS*TFADLH
Trigger: GTGAAGATCAGCAAAAGTGCAGGAGCCATGTTGAAA...TAATGGAACCTTGGATGTTTGAGGGGTGGTTGTAAAGGAAACTGGCAGAAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp CTTGGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTGACACATCAAGGTATTaGAGGCACATGTTGATTGTT +
Preference number: 4 (lower is better)
Translates to: LGFSKNTTTSTPNEHGTCDTSRY*RHMLIV
Trigger: AACAATCAACATGTGCCTGCAATACCTTGATGTGTC...ACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp TCTTTTAGTAACTATTTCTGCCAGTTTCCTTTACAACCACCCCTCAAACATCCACCAGGTACGTTTTCCTaGCACACTTCGGTCCATAAA +
Preference number: 4 (lower is better)
Translates to: SFSNYFCQFPLQPPLKHPPGTFS*HTSVHK
Trigger: TTTATGGACCGAAGTGTGGCAGGAAAACGTACCTGG...TGGATGTTTGAGGGGTGGTTGTAAAGGAAACTGGCAGAAATAGTTACTAAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp CTTGGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTAGCTGCACAGCTGATTaGTACAATCTTGTATTTGAC +
Preference number: 4 (lower is better)
Translates to: LGFSKNTTTSTPNEHGTCSCTAD*YNLVFD
Trigger: GTCAAATACAAGATTGTAGCAATCAGCTGTGCAGCT...ACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000374383.1
CDS-3UTR GCA 90 bp GGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGAGCTGCACAGCTGATTaGTACAATCTTGTATTTGAC +
Preference number: 4 (lower is better)
Translates to: GFSKNTTTSTPNEHGTCLSCTAD*YNLVFD
Trigger: GTCAAATACAAGATTGTAGCAATCAGCTGTGCAGCT...CAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000374383.1
CDS-3UTR GCA 90 bp CCACTTGGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTGATTTTTATCCAGCTTaGTCTGCAACTCTGTCTATT +
Preference number: 4 (lower is better)
Translates to: PLGFSKNTTTSTPNEHGTDFYPA*SATLSI
Trigger: AATAGACAGAGTTGCAGAGCAAGCTGGATAAAAATC...AGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACCAAGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp GGAATCCAAGGTAAGCTACAGAGTTCTCAGTTTACCATCAACACTAAGGTTTTAACAAAGACTGCTGTGTaGCACCCTAAACGTACCTCA +
Preference number: 4 (lower is better)
Translates to: GIQGKLQSSQFTINTKVLTKTAV*HPKRTS
Trigger: TGAGGTACGTTTAGGGTGGCACACAGCAGTCTTTGT...TAAAACCTTAGTGTTGATGGTAAACTGAGAACTCTGTAGCTTACCTTGGATTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp TTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGTTTACTGGGGATTGGAAGTaGACCATTTCTGCCAATTTC +
Preference number: 4 (lower is better)
Translates to: FSKNTTTSTPNEHGTCLFTGDWK*TISANF
Trigger: GAAATTGGCAGAAATGGTCCACTTCCAATCCCCAGT...AAACAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp TTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGTTTCTTTATACACCAGATCTaGCTGGCTAAGATCACTTGC +
Preference number: 4 (lower is better)
Translates to: FQRTPPLQPPMNMALVCFFIHQI*LAKITC
Trigger: GCAAGTGATCTTAGCCAGCCAGATCTGGTGTATAAA...GAAACAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp TGTTTAGCTTCTGGCTTTCAGAAACCCAATGGTAAGGGTCAGTTTAGTTCTGGCGACTGCAAAGCCTTCTaGGTAATAGTAATTAACTCC +
Preference number: 4 (lower is better)
Translates to: CLASGFQKPNGKGQFSSGDCKAF*VIVINS
Trigger: GGAGTTAATTACTATTACCCAGAAGGCTTTGCAGTC...GCCAGAACTAAACTGACCCTTACCATTGGGTTTCTGAAAGCCAGAAGCTAAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp TCTTTTAGTAACTATTTCTGCCAGTTTCCTTTACAACCACCCCTCAAACATCCATTGCAATTGATGCCATaGCAATTGCACCCTGGGCTT +
Preference number: 4 (lower is better)
Translates to: SFSNYFCQFPLQPPLKHPLQLMP*QLHPGL
Trigger: AAGCCCAGGGTGCAATTGCCATGGCATCAATTGCAA...TGGATGTTTGAGGGGTGGTTGTAAAGGAAACTGGCAGAAATAGTTACTAAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp CTATTTCTGCCAGTTTCCTTTACAACCACCCCTCAAACATCCAAGGTTCCATTAGAATTTCATTTGTGCTaGGTTGATTGGGCACAGACT +
Preference number: 4 (lower is better)
Translates to: LFLPVSFTTTPQTSKVPLEFHLC*VDWAQT
Trigger: AGTCTGTGCCCAATCAACCCAGCACAAATGAAATTC...TAATGGAACCTTGGATGTTTGAGGGGTGGTTGTAAAGGAAACTGGCAGAAATAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp TTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGTTTCGAATTTCATTTGTGCTaGGTTGATTGGGCACAGACT +
Preference number: 4 (lower is better)
Translates to: FQRTPPLQPPMNMALVCFEFHLC*VDWAQT
Trigger: AGTCTGTGCCCAATCAACCCAGCACAAATGAAATTC...GAAACAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000374383.1
CDS-3UTR TCA 90 bp TCTTTTAGTAACTATTTCTGCCAGTTTCCTTTACAACCACCCCTCAAACATCCACCATATACCACCCATTaGGCTTCTGCAGGAGTTTTT +
Preference number: 4 (lower is better)
Translates to: SFSNYFCQFPLQPPLKHPPYTTH*ASAGVF
Trigger: AAAAACTCCTGCAGAAGCTCAATGGGTGGTATATGG...TGGATGTTTGAGGGGTGGTTGTAAAGGAAACTGGCAGAAATAGTTACTAAAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp GATGCTAAACAATCATTTTCTCCAAATCAACCACCTAAACACATGACAAGACAATGTGACAAAGGAAACTaGAGCAGGGTCCTGGTACTG +
Preference number: 4 (lower is better)
Translates to: DAKQSFSPNQPPKHMTRQCDKGN*SRVLVL
Trigger: CAGTACCAGGACCCTGCTGCAGTTTCCTTTGTCACA...TTGTCTTGTCATGTGTTTAGGTGGTTGATTTGGAGAAAATGATTGTTTAGCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp TCTTTTAGTAACTATTTCTGCCAGTTTCCTTTACAACCACCCCTCAAACATCCACATGAGAGTTCGCTGTaGCCCTTCCAAAGTACTATA +
Preference number: 4 (lower is better)
Translates to: SFSNYFCQFPLQPPLKHPHESSL*PFQSTI
Trigger: TATAGTACTTTGGAAGGGGCACAGCGAACTCTCATG...TGGATGTTTGAGGGGTGGTTGTAAAGGAAACTGGCAGAAATAGTTACTAAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp GATGCTAAACAATCATTTTCTCCAAATCAACCACCTAAACACATGACAAGACAATGTGCGCAAGGCACATaGGCAAGTACAGAACGATCT +
Preference number: 4 (lower is better)
Translates to: DAKQSFSPNQPPKHMTRQCAQGT*ASTERS
Trigger: AGATCGTTCTGTACTTGCGCATGTGCCTTGCGCACA...TTGTCTTGTCATGTGTTTAGGTGGTTGATTTGGAGAAAATGATTGTTTAGCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp TTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGTTTCTGGCTAAGATCACTTaGCAGAGAACAAAGTTCCTT +
Preference number: 4 (lower is better)
Translates to: FSKNTTTSTPNEHGTCLFLAKIT*QRTKFL
Trigger: AAGGAACTTTGTTCTCTGGCAAGTGATCTTAGCCAG...AAACAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp TTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGTTTGAAGAATTTCATTTGTaGTGGGTTGATTGGGCACAG +
Preference number: 4 (lower is better)
Translates to: FSKNTTTSTPNEHGTCLFEEFHL*WVDWAQ
Trigger: CTGTGCCCAATCAACCCAGCACAAATGAAATTCTTC...AAACAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000374383.1
CDS-3UTR GCA 90 bp GGAATCCAAGGTAAGCTACAGAGTTCTCAGTTTACCATCAACACTAAGGTTTTAAAGGCATTCATTGATTaGAGGACTCCTAGCTGCACT +
Preference number: 4 (lower is better)
Translates to: GIQGKLQSSQFTINTKVLKAFID*RTPSCT
Trigger: AGTGCAGCTAGGAGTCCTGCAATCAATGAATGCCTT...TAAAACCTTAGTGTTGATGGTAAACTGAGAACTCTGTAGCTTACCTTGGATTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp CTTGGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTGATTTTTATCCAGCTTaGTCTGCAACTCTGTCTATT +
Preference number: 4 (lower is better)
Translates to: LGFSKNTTTSTPNEHGTCDFYPA*SATLSI
Trigger: AATAGACAGAGTTGCAGAGCAAGCTGGATAAAAATC...ACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACCAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp TCTTTTAGTAACTATTTCTGCCAGTTTCCTTTACAACCACCCCTCAAACATCCAAGGGAAACACCGTACTaGCAAATTTCACAGCCACTT +
Preference number: 4 (lower is better)
Translates to: SFSNYFCQFPLQPPLKHPRETPY*QISQPL
Trigger: AAGTGGCTGTGAAATTTGCCAGTACGGTGTTTCCCT...TGGATGTTTGAGGGGTGGTTGTAAAGGAAACTGGCAGAAATAGTTACTAAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp TTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGTTTGACTTCACTTCTTTGTaGGTACTTAGCTTCCTGACA +
Preference number: 4 (lower is better)
Translates to: FSKNTTTSTPNEHGTCLFDFTSL*VLSFLT
Trigger: TGTCAGGAAGCTAAGTACCCACAAAGAAGTGAAGTC...AAACAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp TTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGTTTTTTATACACCAGATCTaGCTGGCTAAGATCACTTGC +
Preference number: 4 (lower is better)
Translates to: FSKNTTTSTPNEHGTCLFFIHQI*LAKITC
Trigger: GCAAGTGATCTTAGCCAGCCAGATCTGGTGTATAAA...AAACAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAA
41% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp TCTTTTAGTAACTATTTCTGCCAGTTTCCTTTACAACCACCCCTCAAACATCCAGTCGAATGCCAAGGTTaGGATCAAACTGGTAACGAT +
Preference number: 4 (lower is better)
Translates to: SFSNYFCQFPLQPPLKHPVECQG*DQTGND
Trigger: ATCGTTACCAGTTTGATCCCAACCTTGGCATTCGAC...TGGATGTTTGAGGGGTGGTTGTAAAGGAAACTGGCAGAAATAGTTACTAAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp TTAACGTCAATAAGGATGAGTACTGAATGTAAACCAGTCTTCTGCTCTGGAATCTCCAAATACTTGTCATaGCCTGTCGAATGCCAAGGT +
Preference number: 4 (lower is better)
Translates to: LTSIRMSTECKPVFCSGISKYLS*PVECQG
Trigger: ACCTTGGCATTCGACAGGCCATGACAAGTATTTGGA...GATTCCAGAGCAGAAGACTGGTTTACATTCAGTACTCATCCTTATTGACGTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp TTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGTTTGGGTTAGCACTGATTTaGCAGATGGCCATAAAAGAA +
Preference number: 4 (lower is better)
Translates to: FSKNTTTSTPNEHGTCLFGLALI*QMAIKE
Trigger: TTCTTTTATGGCCATCTGCCAAATCAGTGCTAACCC...AAACAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR TCA 90 bp GATGCTAAACAATCATTTTCTCCAAATCAACCACCTAAACACATGACAAGACAAGAAGGACATCTAGCATaGAGTCCAAAAGCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: DAKQSFSPNQPPKHMTRQEGHLA*SPKAAA
Trigger: TGCAGCTGCTTTTGGACTTCATGCTAGATGTCCTTC...TTGTCTTGTCATGTGTTTAGGTGGTTGATTTGGAGAAAATGATTGTTTAGCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR TCA 90 bp GATGCTAAACAATCATTTTCTCCAAATCAACCACCTAAACACATGACAAGACAATTCATTTTCCAGGACTaGGACTGCAAAGCCTTCTGG +
Preference number: 4 (lower is better)
Translates to: DAKQSFSPNQPPKHMTRQFIFQD*DCKAFW
Trigger: CCAGAAGGCTTTGCAGTCTCAGTCCTGGAAAATGAA...TTGTCTTGTCATGTGTTTAGGTGGTTGATTTGGAGAAAATGATTGTTTAGCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR TCA 90 bp TTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGTTTCATTTCAGCCAAGGAATaGTGCATGCTACAGATTAAT +
Preference number: 4 (lower is better)
Translates to: FQRTPPLQPPMNMALVCFISAKE*CMLQIN
Trigger: ATTAATCTGTAGCATGCATCATTCCTTGGCTGAAAT...GAAACAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000374383.1
CDS-3UTR TCA 90 bp TCTTTTAGTAACTATTTCTGCCAGTTTCCTTTACAACCACCCCTCAAACATCCAAGAAAGCCTCTGAGATaGCACAGCTTCCTATTTCTT +
Preference number: 4 (lower is better)
Translates to: SFSNYFCQFPLQPPLKHPRKPLR*HSFLFL
Trigger: AAGAAATAGGAAGCTGTGTCATCTCAGAGGCTTTCT...TGGATGTTTGAGGGGTGGTTGTAAAGGAAACTGGCAGAAATAGTTACTAAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp CTTGGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTGTTGGTATTAAAAGATaGATTAAGCTATCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: LGFSKNTTTSTPNEHGTCVGIKR*IKLSCC
Trigger: ACAGCAGGATAGCTTAATGCATCTTTTAATACCAAC...ACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACCAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp TGTTTAGCTTCTGGCTTTCAGAAACCCAATGGTAAGGGTCAGTTTAGTTCTGGCGTTGGTATTAAAAGATaGATTAAGCTATCCTGCTGT +
Preference number: 4 (lower is better)
Translates to: CLASGFQKPNGKGQFSSGVGIKR*IKLSCC
Trigger: ACAGCAGGATAGCTTAATGCATCTTTTAATACCAAC...GCCAGAACTAAACTGACCCTTACCATTGGGTTTCTGAAAGCCAGAAGCTAAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp TCTTTTAGTAACTATTTCTGCCAGTTTCCTTTACAACCACCCCTCAAACATCCAGCTTCAAAAAGCTGCTaGACAAGCGCTATATCCTTA +
Preference number: 4 (lower is better)
Translates to: SFSNYFCQFPLQPPLKHPASKSC*TSAISL
Trigger: TAAGGATATAGCGCTTGTGCAGCAGCTTTTTGAAGC...TGGATGTTTGAGGGGTGGTTGTAAAGGAAACTGGCAGAAATAGTTACTAAAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp TCTTTTAGTAACTATTTCTGCCAGTTTCCTTTACAACCACCCCTCAAACATCCAGGGAAGGAAGGCATCTaGTCAGAAGTACTTTCTTTT +
Preference number: 4 (lower is better)
Translates to: SFSNYFCQFPLQPPLKHPGKEGI*SEVLSF
Trigger: AAAAGAAAGTACTTCTGAGCAGATGCCTTCCTTCCC...TGGATGTTTGAGGGGTGGTTGTAAAGGAAACTGGCAGAAATAGTTACTAAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp TTAACGTCAATAAGGATGAGTACTGAATGTAAACCAGTCTTCTGCTCTGGAATCAGAATAAAACAACGCTaGCAGTTCGCGCATTTCTTC +
Preference number: 4 (lower is better)
Translates to: LTSIRMSTECKPVFCSGIRIKQR*QFAHFF
Trigger: GAAGAAATGCGCGAACTGGCAGCGTTGTTTTATTCT...GATTCCAGAGCAGAAGACTGGTTTACATTCAGTACTCATCCTTATTGACGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp CTGAATGTAAACCAGTCTTCTGCTCTGGAATCCAAGGTAAGCTACAGAGTTCTCAAGCTTTCTACAAGATaGAATTTGGTAAAGCCAGAT +
Preference number: 4 (lower is better)
Translates to: LNVNQSSALESKVSYRVLKLSTR*NLVKPD
Trigger: ATCTGGCTTTACCAAATTGCATCTTGTAGAAAGCTT...GAGAACTCTGTAGCTTACCTTGGATTCCAGAGCAGAAGACTGGTTTACATTCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp CTATTTCTGCCAGTTTCCTTTACAACCACCCCTCAAACATCCAAGGTTCCATTATCCCAGTGTTTGGATTaGTCGTTCTTTCATCTTATT +
Preference number: 4 (lower is better)
Translates to: LFLPVSFTTTPQTSKVPLSQCLD*SFFHLI
Trigger: AATAAGATGAAAGAACGAGCAATCCAAACACTGGGA...TAATGGAACCTTGGATGTTTGAGGGGTGGTTGTAAAGGAAACTGGCAGAAATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp GGAATCCAAGGTAAGCTACAGAGTTCTCAGTTTACCATCAACACTAAGGTTTTAGAAGAATTTCATTTGTaGTGGGTTGATTGGGCACAG +
Preference number: 4 (lower is better)
Translates to: GIQGKLQSSQFTINTKVLEEFHL*WVDWAQ
Trigger: CTGTGCCCAATCAACCCAGCACAAATGAAATTCTTC...TAAAACCTTAGTGTTGATGGTAAACTGAGAACTCTGTAGCTTACCTTGGATTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp TTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGTTTCTTCAAGATATCAGCTaGACAGCTGATTGCTACAAT +
Preference number: 4 (lower is better)
Translates to: FSKNTTTSTPNEHGTCLFLQDIS*TADCYN
Trigger: ATTGTAGCAATCAGCTGTGCAGCTGATATCTTGAAG...AAACAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000374383.1
CDS-3UTR GCA 90 bp GGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGCCAAGGAATGATGCATaGTACAGATTAATCTTTACT +
Preference number: 4 (lower is better)
Translates to: GFSKNTTTSTPNEHGTCLPRNDA*YRLIFT
Trigger: AGTAAAGATTAATCTGTAGCATGCATCATTCCTTGG...CAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000374383.1
CDS-3UTR GCA 90 bp GATGCTAAACAATCATTTTCTCCAAATCAACCACCTAAACACATGACAAGACAAACAAAGACTGCTGTGTaGCACCCTAAACGTACCTCA +
Preference number: 4 (lower is better)
Translates to: DAKQSFSPNQPPKHMTRQTKTAV*HPKRTS
Trigger: TGAGGTACGTTTAGGGTGGCACACAGCAGTCTTTGT...TTGTCTTGTCATGTGTTTAGGTGGTTGATTTGGAGAAAATGATTGTTTAGCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp GGAATCCAAGGTAAGCTACAGAGTTCTCAGTTTACCATCAACACTAAGGTTTTATGTAAACCAGTCTTCTaGTCTGGAATCCAAGGTAAG +
Preference number: 4 (lower is better)
Translates to: GIQGKLQSSQFTINTKVLCKPVF*SGIQGK
Trigger: CTTACCTTGGATTCCAGAGCAGAAGACTGGTTTACA...TAAAACCTTAGTGTTGATGGTAAACTGAGAACTCTGTAGCTTACCTTGGATTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp TTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGTTTCAGCTGCACAGTCTTTaGTTTCTCAGCAAGATTAAA +
Preference number: 4 (lower is better)
Translates to: FSKNTTTSTPNEHGTCLFQLHSL*FLSKIK
Trigger: TTTAATCTTGCTGAGAAACCAAAGACTGTGCAGCTG...AAACAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp CTATTTCTGCCAGTTTCCTTTACAACCACCCCTCAAACATCCAAGGTTCCATTAAAATATCCCAGTGTTTaGATTGCTCGTTCTTTCATC +
Preference number: 4 (lower is better)
Translates to: LFLPVSFTTTPQTSKVPLKYPSV*IARSFI
Trigger: GATGAAAGAACGAGCAATCCAAACACTGGGATATTT...TAATGGAACCTTGGATGTTTGAGGGGTGGTTGTAAAGGAAACTGGCAGAAATAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp GATGCTAAACAATCATTTTCTCCAAATCAACCACCTAAACACATGACAAGACAACCACATCATTCACTTTaGCTCCAGCAGGTGGAGTAT +
Preference number: 4 (lower is better)
Translates to: DAKQSFSPNQPPKHMTRQPHHSL*LQQVEY
Trigger: ATACTCCACCTGCTGGAGCCAAAGTGAATGATGTGG...TTGTCTTGTCATGTGTTTAGGTGGTTGATTTGGAGAAAATGATTGTTTAGCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp GGAATCCAAGGTAAGCTACAGAGTTCTCAGTTTACCATCAACACTAAGGTTTTACACATCCAACACCCATaGAACCACATCATTCACTTT +
Preference number: 4 (lower is better)
Translates to: GIQGKLQSSQFTINTKVLHIQHP*NHIIHF
Trigger: AAAGTGAATGATGTGGTTCCATGGGTGTTGGATGTG...TAAAACCTTAGTGTTGATGGTAAACTGAGAACTCTGTAGCTTACCTTGGATTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
3UTR CAA 72 bp CATTATAAATGGTCTAAACCACGGCAGTCTGCGATTTaGTTTCTGGTTTTGCAAAATATGCAGCCACAGACA +
Preference number: 4 (lower is better)
Translates to: HYKWSKPRQSAI*FLVLQNMQPQT
Trigger: TGTCTGTGGCTGCATATTTTGCAAAACCAGAAACAAAATCGCAGACTGCCGTGGTTTAGACCATTTATAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR TCA 90 bp TTAACGTCAATAAGGATGAGTACTGAATGTAAACCAGTCTTCTGCTCTGGAATCATTCCCCGACACTGTTaGTACCACTACAGAATAAAA +
Preference number: 4 (lower is better)
Translates to: LTSIRMSTECKPVFCSGIIPRHC*YHYRIK
Trigger: TTTTATTCTGTAGTGGTATCAACAGTGTCGGGGAAT...GATTCCAGAGCAGAAGACTGGTTTACATTCAGTACTCATCCTTATTGACGTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR TCA 90 bp TCTTTTAGTAACTATTTCTGCCAGTTTCCTTTACAACCACCCCTCAAACATCCAGAGTTCCACATTGCATaGTGGTTGGCTAAATTCATA +
Preference number: 4 (lower is better)
Translates to: SFSNYFCQFPLQPPLKHPEFHIA*WLAKFI
Trigger: TATGAATTTAGCCAACCATCATGCAATGTGGAACTC...TGGATGTTTGAGGGGTGGTTGTAAAGGAAACTGGCAGAAATAGTTACTAAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR TCA 90 bp GATGCTAAACAATCATTTTCTCCAAATCAACCACCTAAACACATGACAAGACAACCATATACCACCCATTaGGCTTCTGCAGGAGTTTTT +
Preference number: 4 (lower is better)
Translates to: DAKQSFSPNQPPKHMTRQPYTTH*ASAGVF
Trigger: AAAAACTCCTGCAGAAGCTCAATGGGTGGTATATGG...TTGTCTTGTCATGTGTTTAGGTGGTTGATTTGGAGAAAATGATTGTTTAGCATC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR TCA 90 bp GGAATCCAAGGTAAGCTACAGAGTTCTCAGTTTACCATCAACACTAAGGTTTTATATCAGCTGCACAGCTaGTTGCTACAATCTTGTATT +
Preference number: 4 (lower is better)
Translates to: GIQGKLQSSQFTINTKVLYQLHS*LLQSCI
Trigger: AATACAAGATTGTAGCAATCAGCTGTGCAGCTGATA...TAAAACCTTAGTGTTGATGGTAAACTGAGAACTCTGTAGCTTACCTTGGATTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR TCA 90 bp TTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGTTTATTTCAGCCAAGGAATaGTGCATGCTACAGATTAAT +
Preference number: 4 (lower is better)
Translates to: FSKNTTTSTPNEHGTCLFISAKE*CMLQIN
Trigger: ATTAATCTGTAGCATGCATCATTCCTTGGCTGAAAT...AAACAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000374383.1
CDS-3UTR GCA 90 bp TTAACGTCAATAAGGATGAGTACTGAATGTAAACCAGTCTTCTGCTCTGGAATCTTTTCACACAGACCTTaGTCAGAGTTTTCAGAGCTA +
Preference number: 4 (lower is better)
Translates to: LTSIRMSTECKPVFCSGIFSHRP*SEFSEL
Trigger: TAGCTCTGAAAACTCTGAGCAAGGTCTGTGTGAAAA...GATTCCAGAGCAGAAGACTGGTTTACATTCAGTACTCATCCTTATTGACGTTAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp TTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGTTTCATAGTAATTAACTCCTaGAGGTATAATCGAATGCCA +
Preference number: 4 (lower is better)
Translates to: FQRTPPLQPPMNMALVCFIVINS*RYNRMP
Trigger: TGGCATTCGATTATACCTGCAGGAGTTAATTACTAT...GAAACAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp GGAATCCAAGGTAAGCTACAGAGTTCTCAGTTTACCATCAACACTAAGGTTTTACTTCAAGATATCAGCTaGACAGCTGATTGCTACAAT +
Preference number: 4 (lower is better)
Translates to: GIQGKLQSSQFTINTKVLLQDIS*TADCYN
Trigger: ATTGTAGCAATCAGCTGTGCAGCTGATATCTTGAAG...TAAAACCTTAGTGTTGATGGTAAACTGAGAACTCTGTAGCTTACCTTGGATTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp GGAATCCAAGGTAAGCTACAGAGTTCTCAGTTTACCATCAACACTAAGGTTTTACTGGAAGTTGTATTTTaGGGCGGCTTTTTATACGTT +
Preference number: 4 (lower is better)
Translates to: GIQGKLQSSQFTINTKVLLEVVF*GGFLYV
Trigger: AACGTATAAAAAGCCGCCCCAAAATACAACTTCCAG...TAAAACCTTAGTGTTGATGGTAAACTGAGAACTCTGTAGCTTACCTTGGATTCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp TCTTTTAGTAACTATTTCTGCCAGTTTCCTTTACAACCACCCCTCAAACATCCACAGCTGCACAGTCTTTaGTTTCTCAGCAAGATTAAA +
Preference number: 4 (lower is better)
Translates to: SFSNYFCQFPLQPPLKHPQLHSL*FLSKIK
Trigger: TTTAATCTTGCTGAGAAACCAAAGACTGTGCAGCTG...TGGATGTTTGAGGGGTGGTTGTAAAGGAAACTGGCAGAAATAGTTACTAAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp GATGCTAAACAATCATTTTCTCCAAATCAACCACCTAAACACATGACAAGACAAGAGGCAATCACCAAGTaGAGAACAGCTTCAAGTTCA +
Preference number: 4 (lower is better)
Translates to: DAKQSFSPNQPPKHMTRQEAITK*RTASSS
Trigger: TGAACTTGAAGCTGTTCTCCACTTGGTGATTGCCTC...TTGTCTTGTCATGTGTTTAGGTGGTTGATTTGGAGAAAATGATTGTTTAGCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp GATGCTAAACAATCATTTTCTCCAAATCAACCACCTAAACACATGACAAGACAATCCAAATACTTGTCATaGCCTGTCGAATGCCAAGGT +
Preference number: 4 (lower is better)
Translates to: DAKQSFSPNQPPKHMTRQSKYLS*PVECQG
Trigger: ACCTTGGCATTCGACAGGCCATGACAAGTATTTGGA...TTGTCTTGTCATGTGTTTAGGTGGTTGATTTGGAGAAAATGATTGTTTAGCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp TTAACGTCAATAAGGATGAGTACTGAATGTAAACCAGTCTTCTGCTCTGGAATCGACTGCAAAGCCTTCTaGGTAATAGTAATTAACTCC +
Preference number: 4 (lower is better)
Translates to: LTSIRMSTECKPVFCSGIDCKAF*VIVINS
Trigger: GGAGTTAATTACTATTACCCAGAAGGCTTTGCAGTC...GATTCCAGAGCAGAAGACTGGTTTACATTCAGTACTCATCCTTATTGACGTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp GGAATCCAAGGTAAGCTACAGAGTTCTCAGTTTACCATCAACACTAAGGTTTTAACAATGTTTAGCTTCTaGCTTTCAGAAACCCAATGG +
Preference number: 4 (lower is better)
Translates to: GIQGKLQSSQFTINTKVLTMFSF*LSETQW
Trigger: CCATTGGGTTTCTGAAAGCCAGAAGCTAAACATTGT...TAAAACCTTAGTGTTGATGGTAAACTGAGAACTCTGTAGCTTACCTTGGATTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR TCA 90 bp GGAATCCAAGGTAAGCTACAGAGTTCTCAGTTTACCATCAACACTAAGGTTTTAATAGATAAAGCTTCTTaGATAGCAAGTCGAGTCTCA +
Preference number: 4 (lower is better)
Translates to: GIQGKLQSSQFTINTKVLIDKAS*IASRVS
Trigger: TGAGACTCGACTTGCTATTCAAGAAGCTTTATCTAT...TAAAACCTTAGTGTTGATGGTAAACTGAGAACTCTGTAGCTTACCTTGGATTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR TCA 90 bp GATGCTAAACAATCATTTTCTCCAAATCAACCACCTAAACACATGACAAGACAATGTATCTCCGGGCTGTaGTTGTCTTTTGTAGTCTTT +
Preference number: 4 (lower is better)
Translates to: DAKQSFSPNQPPKHMTRQCISGL*LSFVVF
Trigger: AAAGACTACAAAAGACAATCACAGCCCGGAGATACA...TTGTCTTGTCATGTGTTTAGGTGGTTGATTTGGAGAAAATGATTGTTTAGCATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp GGAATCCAAGGTAAGCTACAGAGTTCTCAGTTTACCATCAACACTAAGGTTTTATCATCAGCAATTTCATaGATGCCTAAAAATGCCAGA +
Preference number: 4 (lower is better)
Translates to: GIQGKLQSSQFTINTKVLSSAIS*MPKNAR
Trigger: TCTGGCATTTTTAGGCATGCATGAAATTGCTGATGA...TAAAACCTTAGTGTTGATGGTAAACTGAGAACTCTGTAGCTTACCTTGGATTCC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp TTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGTTTCCAAGGAATGATGCATaGTACAGATTAATCTTTACT +
Preference number: 4 (lower is better)
Translates to: FSKNTTTSTPNEHGTCLFPRNDA*YRLIFT
Trigger: AGTAAAGATTAATCTGTAGCATGCATCATTCCTTGG...AAACAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000374383.1
CDS-3UTR CCA 90 bp GATGCTAAACAATCATTTTCTCCAAATCAACCACCTAAACACATGACAAGACAATTGTTCAGGTGTCCATaGGTTATCACCAATAACTCG +
Preference number: 4 (lower is better)
Translates to: DAKQSFSPNQPPKHMTRQLFRCP*VITNNS
Trigger: CGAGTTATTGGTGATAACCCATGGACACCTGAACAA...TTGTCTTGTCATGTGTTTAGGTGGTTGATTTGGAGAAAATGATTGTTTAGCATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp GATGCTAAACAATCATTTTCTCCAAATCAACCACCTAAACACATGACAAGACAACACATCCAACACCCATaGAACCACATCATTCACTTT +
Preference number: 4 (lower is better)
Translates to: DAKQSFSPNQPPKHMTRQHIQHP*NHIIHF
Trigger: AAAGTGAATGATGTGGTTCCATGGGTGTTGGATGTG...TTGTCTTGTCATGTGTTTAGGTGGTTGATTTGGAGAAAATGATTGTTTAGCATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp TCTTTTAGTAACTATTTCTGCCAGTTTCCTTTACAACCACCCCTCAAACATCCAAAGCTTTCTACAAGATaGAATTTGGTAAAGCCAGAT +
Preference number: 4 (lower is better)
Translates to: SFSNYFCQFPLQPPLKHPKLSTR*NLVKPD
Trigger: ATCTGGCTTTACCAAATTGCATCTTGTAGAAAGCTT...TGGATGTTTGAGGGGTGGTTGTAAAGGAAACTGGCAGAAATAGTTACTAAAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp GATGCTAAACAATCATTTTCTCCAAATCAACCACCTAAACACATGACAAGACAAATGGCCCATAGCAAATaGACAAGATTTCTGAATCAC +
Preference number: 4 (lower is better)
Translates to: DAKQSFSPNQPPKHMTRQMAHSK*TRFLNH
Trigger: GTGATTCAGAAATCTTGTGCATTTGCTATGGGCCAT...TTGTCTTGTCATGTGTTTAGGTGGTTGATTTGGAGAAAATGATTGTTTAGCATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp TTAACGTCAATAAGGATGAGTACTGAATGTAAACCAGTCTTCTGCTCTGGAATCATAGTAATTAACTCCTaGAGGTATAATCGAATGCCA +
Preference number: 4 (lower is better)
Translates to: LTSIRMSTECKPVFCSGIIVINS*RYNRMP
Trigger: TGGCATTCGATTATACCTGCAGGAGTTAATTACTAT...GATTCCAGAGCAGAAGACTGGTTTACATTCAGTACTCATCCTTATTGACGTTAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp TCTTTTAGTAACTATTTCTGCCAGTTTCCTTTACAACCACCCCTCAAACATCCACCAAGGAATGATGCATaGTACAGATTAATCTTTACT +
Preference number: 4 (lower is better)
Translates to: SFSNYFCQFPLQPPLKHPPRNDA*YRLIFT
Trigger: AGTAAAGATTAATCTGTAGCATGCATCATTCCTTGG...TGGATGTTTGAGGGGTGGTTGTAAAGGAAACTGGCAGAAATAGTTACTAAAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CCA 90 bp GATGCTAAACAATCATTTTCTCCAAATCAACCACCTAAACACATGACAAGACAAATACGTTTATTCAGATaGACCAGCAGTTCCATTACC +
Preference number: 4 (lower is better)
Translates to: DAKQSFSPNQPPKHMTRQIRLFR*TSSSIT
Trigger: GGTAATGGAACTGCTGGTCCATCTGAATAAACGTAT...TTGTCTTGTCATGTGTTTAGGTGGTTGATTTGGAGAAAATGATTGTTTAGCATC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR GCA 90 bp GATGCTAAACAATCATTTTCTCCAAATCAACCACCTAAACACATGACAAGACAATCATCAGCAATTTCATaGATGCCTAAAAATGCCAGA +
Preference number: 4 (lower is better)
Translates to: DAKQSFSPNQPPKHMTRQSSAIS*MPKNAR
Trigger: TCTGGCATTTTTAGGCATGCATGAAATTGCTGATGA...TTGTCTTGTCATGTGTTTAGGTGGTTGATTTGGAGAAAATGATTGTTTAGCATC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS GCA 90 bp CGGGCCTCTGACCTGAGTCGGAGCCGGTCTCCATGCCGCGGACGCTaGGCTCGGCGCCGCGAGGTGAGGGCTGTAGAGCGAGGCGTTCGG +
Preference number: 5 (lower is better)
Translates to: RASDLSRSRSPCRGR*ARRREVRAVERGVR
Trigger: CCGAACGCCTCGCTCTACAGCCCTCACCTCGCGGCGCCGAGCGCAGCGTCCGCGGCATGGAGACCGGCTCCGACTCAGGTCAGAGGCCCG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259335.8
CDS GCA 90 bp CCGCGCGCCGCAGTCCGTGAGGGGCTGGGCCGAGCGGGCCCGGGCTaGCACGCCTGTCCAAAGGAAGAGACGTGGACTCAGAAAAGTAGA +
Preference number: 5 (lower is better)
Translates to: PRAAVREGLGRAGPG*HACPKEETWTQKSR
Trigger: TCTACTTTTCTGAGTCCACGTCTCTTCCTTTGGACAGGCGTGGCAGCCCGGGCCCGCTCGGCCCAGCCCCTCACGGACTGCGGCGCGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000259335.8
CDS GCA 90 bp GTTCAAGCTGATCTGAGTCGGAGCCGGTCTCCATGCCGCGGACGCTaGGCTCGGCGCCGCGAGGTGAGGGCTGTAGAGCGAGGCGTTCGG +
Preference number: 5 (lower is better)
Translates to: VQADLSRSRSPCRGR*ARRREVRAVERGVR
Trigger: CCGAACGCCTCGCTCTACAGCCCTCACCTCGCGGCGCCGAGCGCAGCGTCCGCGGCATGGAGACCGGCTCCGACTCAGATCAGCTTGAAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338205.9
CDS CCA 90 bp GGCCGAGCGGGCCCGGGCTGCCACGCCTGTCCAAAGGAAGAGACGTaGACTCAGAAAAGTAGAGCCGGGCTCGGAGTCGGCGGGAGGAAG +
Preference number: 5 (lower is better)
Translates to: GRAGPGCHACPKEET*TQKSRAGLGVGGRK
Trigger: CTTCCTCCCGCCGACTCCGAGCCCGGCTCTACTTTTCTGAGTCCACGTCTCTTCCTTTGGACAGGCGTGGCAGCCCGGGCCCGCTCGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259335.8
CDS GCA 90 bp TGTATAAAGAATCTGAGTCGGAGCCGGTCTCCATGCCGCGGACGCTaGGCTCGGCGCCGCGAGGTGAGGGCTGTAGAGCGAGGCGTTCGG +
Preference number: 5 (lower is better)
Translates to: CIKNLSRSRSPCRGR*ARRREVRAVERGVR
Trigger: CCGAACGCCTCGCTCTACAGCCCTCACCTCGCGGCGCCGAGCGCAGCGTCCGCGGCATGGAGACCGGCTCCGACTCAGATTCTTTATACA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684092.1
CDS CCA 90 bp CAATGGCTGGGGCATGATCCTGCATATCAGCCAAACTCTGAGAGGTaGGCACCACCCCCGCACTGTGCGCAAGGCACATGCGCAAGTACA +
Preference number: 5 (lower is better)
Translates to: QWLGHDPAYQPNSER*APPPHCAQGTCAST
Trigger: TGTACTTGCGCATGTGCCTTGCGCACAGTGCGGGGGTGGTGCCCACCTCTCAGAGTTTGGCTGATATGCAGGATCATGCCCCAGCCATTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000602447.5
ENST00000684092.1
CDS-3UTR CAA 90 bp GGGCATGGGCAACAGAAGGAAGGAGGAAAACCCCTAGTGGCAATGATTTACTTGTCTGCGGCTGTCACGTaGGCTGGGCCCGACCTGGGG +
Preference number: 5 (lower is better)
Translates to: GHGQQKEGGKPLVAMIYLSAAVT*AGPDLG
Trigger: CCCCAGGTCGGGCCCAGCCAACGTGACAGCCGCAGA...CAAGTAAATCATTGCCACTAGGGGTTTTCCTCCTTCCTTCTGTTGCCCATGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000338205.9
CDS GCA 90 bp GTCCAGAAGGCAAGGCAGAAGGGCAGCGATGGTTCTCTGGCCAGCTaGTCCTTTGGCAGGGTCACACATTTTCACACAGACCTTGCTCAG +
Preference number: 5 (lower is better)
Translates to: VQKARQKGSDGSLAS*SFGRVTHFHTDLAQ
Trigger: CTGAGCAAGGTCTGTGTGAAAATGTGTGACCCTGCCAAAGGAGCAGCTGGCCAGAGAACCATCGCTGCCCTTCTGCCTTGCCTTCTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000684092.1
CDS CCA 90 bp GTGCCATCTGCCCGCTTGACATTAAAGTCCGTATGTAGCGCCCAATaGCTGGGGCATGATCCTGCATATCAGCCAAACTCTGAGAGGTGG +
Preference number: 5 (lower is better)
Translates to: VPSARLTLKSVCSAQ*LGHDPAYQPNSERW
Trigger: CCACCTCTCAGAGTTTGGCTGATATGCAGGATCATGCCCCAGCCATTGGGCGCTACATACGGACTTTAATGTCAAGCGGGCAGATGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000602447.5
ENST00000684092.1
CDS CCA 90 bp GGCAAGGCAGAAGGGCAGCGATGGTTCTCTGGCCAGCTGCTCCTTTaGCAGGGTCACACATTTTCACACAGACCTTGCTCAGAGTTTTCA +
Preference number: 5 (lower is better)
Translates to: GKAEGQRWFSGQLLL*QGHTFSHRPCSEFS
Trigger: TGAAAACTCTGAGCAAGGTCTGTGTGAAAATGTGTGACCCTGCCAAAGGAGCAGCTGGCCAGAGAACCATCGCTGCCCTTCTGCCTTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000684092.1
CDS CCA 90 bp ATTCCTTTGTCCAGAAGGCAAGGCAGAAGGGCAGCGATGGTTCTCTaGCCAGCTGCTCCTTTGGCAGGGTCACACATTTTCACACAGACC +
Preference number: 5 (lower is better)
Translates to: IPLSRRQGRRAAMVL*PAAPLAGSHIFTQT
Trigger: GGTCTGTGTGAAAATGTGTGACCCTGCCAAAGGAGCAGCTGGCCAGAGAACCATCGCTGCCCTTCTGCCTTGCCTTCTGGACAAAGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000684092.1
CDS CCA 90 bp TGCTCATCATTCCTTTGTCCAGAAGGCAAGGCAGAAGGGCAGCGATaGTTCTCTGGCCAGCTGCTCCTTTGGCAGGGTCACACATTTTCA +
Preference number: 5 (lower is better)
Translates to: CSSFLCPEGKAEGQR*FSGQLLLWQGHTFS
Trigger: TGAAAATGTGTGACCCTGCCAAAGGAGCAGCTGGCCAGAGAACCATCGCTGCCCTTCTGCCTTGCCTTCTGGACAAAGGAATGATGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000684092.1
CDS-3UTR CAA 90 bp GTACCTCATCTTGGAAGTTTCTTGGGTAAGCCGGGGTTAGCACTGATTTGGCAGTTTCGCGGCCAGGCTTaGCCCAGGCTTTCAAAGGCA +
Preference number: 5 (lower is better)
Translates to: VPHLGSFLGKPGLALIWQFRGQA*PRLSKA
Trigger: TGCCTTTGAAAGCCTGGGCAAAGCCTGGCCGCGAAA...CTGCCAAATCAGTGCTAACCCCGGCTTACCCAAGAAACTTCCAAGATGAGGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp CAGATGGCCATAAAAGAAAGTATCCAGGGCCAGACATTAAACACCTGGGTTCTGCCAGGTCTGCTGCCGTaGCCACACTGTGGCGTGTAT +
Preference number: 5 (lower is better)
Translates to: QMAIKESIQGQTLNTWVLPGLLP*PHCGVY
Trigger: ATACACGCCACAGTGTGGCAACGGCAGCAGACCTGG...CAGAACCCAGGTGTTTAATGTCTGGCCCTGGATACTTTCTTTTATGGCCATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp TTTCCTCTTACCCTACACTTTCAGGCAGGGGCATGGGCAACAGAAGGAAGGAGGTTAGTCTCCCCACTCTaGTTAGATGATGAGGGTGCC +
Preference number: 5 (lower is better)
Translates to: FPLTLHFQAGAWATEGRRLVSPL*LDDEGA
Trigger: GGCACCCTCATCATCTAACAAGAGTGGGGAGACTAA...CCTCCTTCCTTCTGTTGCCCATGCCCCTGCCTGAAAGTGTAGGGTAAGAGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp TTTCCTCTTACCCTACACTTTCAGGCAGGGGCATGGGCAACAGAAGGAAGGAGGACCACATCATTCACTTaGGCTCCAGCAGGTGGAGTA +
Preference number: 5 (lower is better)
Translates to: FPLTLHFQAGAWATEGRRTTSFT*APAGGV
Trigger: TACTCCACCTGCTGGAGCCAAAGTGAATGATGTGGT...CCTCCTTCCTTCTGTTGCCCATGCCCCTGCCTGAAAGTGTAGGGTAAGAGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp GGGCATGGGCAACAGAAGGAAGGAGGAAAACCCCTAGTGGCAATGATTTACTTGTGGCCAGCTGCTCCTTaGGCAGGGTCACACATTTTC +
Preference number: 5 (lower is better)
Translates to: GHGQQKEGGKPLVAMIYLWPAAP*AGSHIF
Trigger: GAAAATGTGTGACCCTGCCAAAGGAGCAGCTGGCCA...CAAGTAAATCATTGCCACTAGGGGTTTTCCTCCTTCCTTCTGTTGCCCATGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp TTTCCTCTTACCCTACACTTTCAGGCAGGGGCATGGGCAACAGAAGGAAGGAGGGTGCTCATCATTCCTTaGTCCAGAAGGCAAGGCAGA +
Preference number: 5 (lower is better)
Translates to: FPLTLHFQAGAWATEGRRVLIIP*SRRQGR
Trigger: TCTGCCTTGCCTTCTGGACAAAGGAATGATGAGCAC...CCTCCTTCCTTCTGTTGCCCATGCCCCTGCCTGAAAGTGTAGGGTAAGAGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp TTTACAACCACCCCTCAAACATCCAAGGTTCCATTAAGCTCACTCAGCCCAGATCATCGCAGCCTTTTCTaGCTCTGTCGCCCGGAGGCT +
Preference number: 5 (lower is better)
Translates to: FTTTPQTSKVPLSSLSPDHRSLF*LCRPEA
Trigger: AGCCTCCGGGCGACAGAGCAAGAAAAGGCTGCGATG...ATCTGGGCTGAGTGAGCTTAATGGAACCTTGGATGTTTGAGGGGTGGTTGTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS GCA 90 bp TTCAATAGCTCCTCCTTTCCTGCCCACGTTCTTCCAGCCAGGCCTTaGAGCAATGCGGTCAGTATCATTCCGAGATATGGAGGTACTAGA +
Preference number: 5 (lower is better)
Translates to: FNSSSFPAHVLPARP*SNAVSIIPRYGGTR
Trigger: TCTAGTACCTCCATATCTCGGAATGATACTGACCGCATTGCTGCAAGGCCTGGCTGGAAGAACGTGGGCAGGAAAGGAGGAGCTATTGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000374383.1
ENST00000684092.1
CDS-3UTR CAA 90 bp CTGAATGTAAACCAGTCTTCTGCTCTGGAATCCAAGGTAAGCTACAGAGTTCTCCCAGGTCTGCTGCCGTaGCCACACTGTGGCGTGTAT +
Preference number: 5 (lower is better)
Translates to: LNVNQSSALESKVSYRVLPGLLP*PHCGVY
Trigger: ATACACGCCACAGTGTGGCAACGGCAGCAGACCTGG...GAGAACTCTGTAGCTTACCTTGGATTCCAGAGCAGAAGACTGGTTTACATTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp GTACCTCATCTTGGAAGTTTCTTGGGTAAGCCGGGGTTAGCACTGATTTGGCAGGAACGTTTCAGCAGCTaGTCTAGAGCGGAGGAGATG +
Preference number: 5 (lower is better)
Translates to: VPHLGSFLGKPGLALIWQERFSS*SRAEEM
Trigger: CATCTCCTCCGCTCTAGACAAGCTGCTGAAACGTTC...CTGCCAAATCAGTGCTAACCCCGGCTTACCCAAGAAACTTCCAAGATGAGGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp GTACCTCATCTTGGAAGTTTCTTGGGTAAGCCGGGGTTAGCACTGATTTGGCAGCTGAATGAGTTCCTCTaGATCAGGGAGGGTGTCAGC +
Preference number: 5 (lower is better)
Translates to: VPHLGSFLGKPGLALIWQLNEFL*IREGVS
Trigger: GCTGACACCCTCCCTGATCAAGAGGAACTCATTCAG...CTGCCAAATCAGTGCTAACCCCGGCTTACCCAAGAAACTTCCAAGATGAGGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp GGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGCATCGCAGCCTTTTCTaGCTCTGTCGCCCGGAGGCT +
Preference number: 5 (lower is better)
Translates to: GFSKNTTTSTPNEHGTCLHRSLF*LCRPEA
Trigger: AGCCTCCGGGCGACAGAGCAAGAAAAGGCTGCGATG...CAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp AGGAAGACGATTGGAATTATCCGAAGGAGACTGACTCTGTCCTCTCCATCTGTATTTCGCGGCCAGGCTTaGCCCAGGCTTTCAAAGGCA +
Preference number: 5 (lower is better)
Translates to: RKTIGIIRRRLTLSSPSVFRGQA*PRLSKA
Trigger: TGCCTTTGAAAGCCTGGGCAAAGCCTGGCCGCGAAA...TACAGATGGAGAGGACAGAGTCAGTCTCCTTCGGATAATTCCAATCGTCTTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS GCA 90 bp TTCACTTTGGCTCCAGCAGGTGGAGTATATTCCTCTTCAGTCATTTaGCAGGCATCTCGGGCAGCCACAGAACTAGTTCCTATTGCAGCA +
Preference number: 5 (lower is better)
Translates to: FTLAPAGGVYSSSVI*QASRAATELVPIAA
Trigger: TGCTGCAATAGGAACTAGTTCTGTGGCTGCCCGAGATGCCTGGCAAATGACTGAAGAGGAATATACTCCACCTGCTGGAGCCAAAGTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000684092.1
CDS GCA 90 bp CAGAGCTGGAATGAGTTTTGGTGCATGCGGTTTCAACATGGCTCCTaGACTTTTGCTGATCTTCACAAGGGTGTTAATGCTGAGGGCTCG +
Preference number: 5 (lower is better)
Translates to: QSWNEFWCMRFQHGS*TFADLHKGVNAEGS
Trigger: CGAGCCCTCAGCATTAACACCCTTGTGAAGATCAGCAAAAGTGCAGGAGCCATGTTGAAACCGCATGCACCAAAACTCATTCCAGCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000684092.1
CDS CCA 90 bp GCCGTTGCCACACTGTGGCGTGTATCACTAGAGGCAATCACCAAGTaGAGAACAGCTTCAAGTTCAGGCACCTGTTCAGCTTCTATGAAT +
Preference number: 5 (lower is better)
Translates to: AVATLWRVSLEAITK*RTASSSGTCSASMN
Trigger: ATTCATAGAAGCTGAACAGGTGCCTGAACTTGAAGCTGTTCTCCACTTGGTGATTGCCTCTAGTGATACACGCCACAGTGTGGCAACGGC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000602447.5
ENST00000684092.1
CDS CCA 90 bp CTCTGTTTGCTTTTCAATTCCAGGTCTGCTGCCGTTGCCACACTGTaGCGTGTATCACTAGAGGCAATCACCAAGTGGAGAACAGCTTCA +
Preference number: 5 (lower is better)
Translates to: LCLLFNSRSAAVATL*RVSLEAITKWRTAS
Trigger: TGAAGCTGTTCTCCACTTGGTGATTGCCTCTAGTGATACACGCCACAGTGTGGCAACGGCAGCAGACCTGGAATTGAAAAGCAAACAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000602447.5
ENST00000684092.1
CDS CCA 90 bp TTCTACAAGATGCAATTTGGTAAAGCCAGATCCCTCACTGGGGATTaGAAGTGGACCATTTCTGCCAATTTCACCCAGGGCTGTGCAGGC +
Preference number: 5 (lower is better)
Translates to: FYKMQFGKARSLTGD*KWTISANFTQGCAG
Trigger: GCCTGCACAGCCCTGGGTGAAATTGGCAGAAATGGTCCACTTCCAATCCCCAGTGAGGGATCTGGCTTTACCAAATTGCATCTTGTAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000602447.5
ENST00000684092.1
CDS-3UTR CAA 90 bp TTTCCTCTTACCCTACACTTTCAGGCAGGGGCATGGGCAACAGAAGGAAGGAGGTGTCTCTACTGGAAGTaGTATTTTGGGGCGGCTTTT +
Preference number: 5 (lower is better)
Translates to: FPLTLHFQAGAWATEGRRCLYWK*YFGAAF
Trigger: AAAAGCCGCCCCAAAATACAACTTCCAGTAGAGACA...CCTCCTTCCTTCTGTTGCCCATGCCCCTGCCTGAAAGTGTAGGGTAAGAGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp GGGCATGGGCAACAGAAGGAAGGAGGAAAACCCCTAGTGGCAATGATTTACTTGGTGCCATCTGCCCGCTaGACATTAAAGTCCGTATGT +
Preference number: 5 (lower is better)
Translates to: GHGQQKEGGKPLVAMIYLVPSAR*TLKSVC
Trigger: ACATACGGACTTTAATGTCAAGCGGGCAGATGGCAC...CAAGTAAATCATTGCCACTAGGGGTTTTCCTCCTTCCTTCTGTTGCCCATGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp TGTTTAGCTTCTGGCTTTCAGAAACCCAATGGTAAGGGTCAGTTTAGTTCTGGCCTGTGCAGGCAGCAATaGCCAGGAGGGGTGATGTAC +
Preference number: 5 (lower is better)
Translates to: CLASGFQKPNGKGQFSSGLCRQQ*PGGVMY
Trigger: GTACATCACCCCTCCTGGCAATTGCTGCCTGCACAG...GCCAGAACTAAACTGACCCTTACCATTGGGTTTCTGAAAGCCAGAAGCTAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp AGGAAGACGATTGGAATTATCCGAAGGAGACTGACTCTGTCCTCTCCATCTGTAGCCAAGAGCTCCCCCTaGAAATACCACTGTCTCTCC +
Preference number: 5 (lower is better)
Translates to: RKTIGIIRRRLTLSSPSVAKSSP*KYHCLS
Trigger: GGAGAGACAGTGGTATTTCAAGGGGGAGCTCTTGGC...TACAGATGGAGAGGACAGAGTCAGTCTCCTTCGGATAATTCCAATCGTCTTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp CCACTTGGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGGCCAGCTGCTCCTTaGGCAGGGTCACACATTTTC +
Preference number: 5 (lower is better)
Translates to: PLGFSKNTTTSTPNEHGTWPAAP*AGSHIF
Trigger: GAAAATGTGTGACCCTGCCAAAGGAGCAGCTGGCCA...AGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACCAAGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp AGGAAGACGATTGGAATTATCCGAAGGAGACTGACTCTGTCCTCTCCATCTGTATCTTCCAGCCAGGCCTaGCAGCAATGCGGTCAGTAT +
Preference number: 5 (lower is better)
Translates to: RKTIGIIRRRLTLSSPSVSSSQA*QQCGQY
Trigger: ATACTGACCGCATTGCTGCAAGGCCTGGCTGGAAGA...TACAGATGGAGAGGACAGAGTCAGTCTCCTTCGGATAATTCCAATCGTCTTCCT
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp CTTGGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTCTGACGATAACAACGTaGGGTCTCCGCGTTTCGCGG +
Preference number: 5 (lower is better)
Translates to: LGFSKNTTTSTPNEHGTCLTITT*GLRVSR
Trigger: CCGCGAAACGCGGAGACCCAACGTTGTTATCGTCAG...ACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACCAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS TCA 90 bp CGTGGATCTCCTGCAGCCAGTAGCAGCAAATATCTGGAAGGGATATaGTCTGAGGGAAACACCGTACTGGCAAATTTCACAGCCACTTGT +
Preference number: 5 (lower is better)
Translates to: RGSPAASSSKYLEGI*SEGNTVLANFTATC
Trigger: ACAAGTGGCTGTGAAATTTGCCAGTACGGTGTTTCCCTCAGATCATATCCCTTCCAGATATTTGCTGCTACTGGCTGCAGGAGATCCACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000602447.5
ENST00000684092.1
CDS TCA 90 bp AGGCATTCATTGATTGCAGGACTCCTAGCTGCACTTTCCACGTGCTaGGTTTTAGCCGTTCACACATCAGTTTGCACAGCTCCTGACGAT +
Preference number: 5 (lower is better)
Translates to: RHSLIAGLLAALSTC*VLAVHTSVCTAPDD
Trigger: ATCGTCAGGAGCTGTGCAAACTGATGTGTGAACGGCTAAAACTCAGCACGTGGAAAGTGCAGCTAGGAGTCCTGCAATCAATGAATGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000465499.1
ENST00000684092.1
CDS GCA 90 bp CAATTGTTCAGGTGTCCATGGGTTATCACCAATAACTCGTTTGGCTaGATAAAAGCTCATTCCCGGAGGAGGCTGTGGGATTCCAGAACC +
Preference number: 5 (lower is better)
Translates to: QLFRCPWVITNNSFG*IKAHSRRRLWDSRT
Trigger: GGTTCTGGAATCCCACAGCCTCCTCCGGGAATGAGCTTTTATGCAGCCAAACGAGTTATTGGTGATAACCCATGGACACCTGAACAATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000602447.5
ENST00000684092.1
CDS CCA 90 bp CATGCGCAAGTACAGAACGATCTCTCCAAAGGCTGCTGGGTTAAATaGAAGGACAGTGGTCCCGGTCATGTACTTGACTGGAGTTTTCAT +
Preference number: 5 (lower is better)
Translates to: HAQVQNDLSKGCWVK*KDSGPGHVLDWSFH
Trigger: ATGAAAACTCCAGTCAAGTACATGACCGGGACCACTGTCCTTCCATTTAACCCAGCAGCCTTTGGAGAGATCGTTCTGTACTTGCGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000602447.5
ENST00000684092.1
CDS-3UTR CAA 90 bp TTTCCTCTTACCCTACACTTTCAGGCAGGGGCATGGGCAACAGAAGGAAGGAGGACTGGAAGTTGTATTTaGGGGCGGCTTTTTATACGT +
Preference number: 5 (lower is better)
Translates to: FPLTLHFQAGAWATEGRRTGSCI*GRLFIR
Trigger: ACGTATAAAAAGCCGCCCCAAAATACAACTTCCAGT...CCTCCTTCCTTCTGTTGCCCATGCCCCTGCCTGAAAGTGTAGGGTAAGAGGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp TTTACAACCACCCCTCAAACATCCAAGGTTCCATTAAGCTCACTCAGCCCAGATAACCTCCGCCACTGTTaGAAGAAGAACCCTGTGCTG +
Preference number: 5 (lower is better)
Translates to: FTTTPQTSKVPLSSLSPDNLRHC*KKNPVL
Trigger: CAGCACAGGGTTCTTCTTCAAACAGTGGCGGAGGTT...ATCTGGGCTGAGTGAGCTTAATGGAACCTTGGATGTTTGAGGGGTGGTTGTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp AGGAAGACGATTGGAATTATCCGAAGGAGACTGACTCTGTCCTCTCCATCTGTAAACCTCCGCCACTGTTaGAAGAAGAACCCTGTGCTG +
Preference number: 5 (lower is better)
Translates to: RKTIGIIRRRLTLSSPSVNLRHC*KKNPVL
Trigger: CAGCACAGGGTTCTTCTTCAAACAGTGGCGGAGGTT...TACAGATGGAGAGGACAGAGTCAGTCTCCTTCGGATAATTCCAATCGTCTTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp CCACTTGGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTGAACGTTTCAGCAGCTaGTCTAGAGCGGAGGAGATG +
Preference number: 5 (lower is better)
Translates to: PLGFSKNTTTSTPNEHGTERFSS*SRAEEM
Trigger: CATCTCCTCCGCTCTAGACAAGCTGCTGAAACGTTC...AGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACCAAGTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp GGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGTTCCTCTTCAGTCATTaGCCAGGCATCTCGGGCAGC +
Preference number: 5 (lower is better)
Translates to: GFSKNTTTSTPNEHGTCLFLFSH*PGISGS
Trigger: GCTGCCCGAGATGCCTGGCAAATGACTGAAGAGGAA...CAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp GATTTGGCAGATGGCCATAAAAGAAAGTATCCAGGGCCAGACATTAAACACCTGGCCAAGAGCTCCCCCTaGAAATACCACTGTCTCTCC +
Preference number: 5 (lower is better)
Translates to: DLADGHKRKYPGPDIKHLAKSSP*KYHCLS
Trigger: GGAGAGACAGTGGTATTTCAAGGGGGAGCTCTTGGC...CAGGTGTTTAATGTCTGGCCCTGGATACTTTCTTTTATGGCCATCTGCCAAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp GTACCTCATCTTGGAAGTTTCTTGGGTAAGCCGGGGTTAGCACTGATTTGGCAGATCATTGGAGAAGATTaGGCAGCACTAAGCCGAGCA +
Preference number: 5 (lower is better)
Translates to: VPHLGSFLGKPGLALIWQIIGED*AALSRA
Trigger: TGCTCGGCTTAGTGCTGCCAAATCTTCTCCAATGAT...CTGCCAAATCAGTGCTAACCCCGGCTTACCCAAGAAACTTCCAAGATGAGGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp GTACCTCATCTTGGAAGTTTCTTGGGTAAGCCGGGGTTAGCACTGATTTGGCAGTTGATGCCATGGCAATaGCACCCTGGGCTTTCATTT +
Preference number: 5 (lower is better)
Translates to: VPHLGSFLGKPGLALIWQLMPWQ*HPGLSF
Trigger: AAATGAAAGCCCAGGGTGCAATTGCCATGGCATCAA...CTGCCAAATCAGTGCTAACCCCGGCTTACCCAAGAAACTTCCAAGATGAGGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp GGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGTCTTCCAGCCAGGCCTaGCAGCAATGCGGTCAGTAT +
Preference number: 5 (lower is better)
Translates to: GFSKNTTTSTPNEHGTCLSSSQA*QQCGQY
Trigger: ATACTGACCGCATTGCTGCAAGGCCTGGCTGGAAGA...CAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000374383.1
CDS TCA 90 bp CTTGAACTTCAGGCTTTATTAAGTACGAAGCCACAAGTGCCTCCATaGGAGTTCGCTGTGCCCCTTCCAAAGTACTATACGCTCCAACCA +
Preference number: 5 (lower is better)
Translates to: LELQALLSTKPQVPP*EFAVPLPKYYTLQP
Trigger: TGGTTGGAGCGTATAGTACTTTGGAAGGGGCACAGCGAACTCTCATGGAGGCACTTGTGGCTTCGTACTTAATAAAGCCTGAAGTTCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000602447.5
ENST00000684092.1
CDS GCA 90 bp AGTCGAGTCTCAGGCTCTTCCTTGCAAAGGGCTTCAAAAAGCTGCTaGACAAGCGCTATATCCTTAGTGAATAAATGTGGCATCCGACTG +
Preference number: 5 (lower is better)
Translates to: SRVSGSSLQRASKSC*TSAISLVNKCGIRL
Trigger: CAGTCGGATGCCACATTTATTCACTAAGGATATAGCGCTTGTGCAGCAGCTTTTTGAAGCCCTTTGCAAGGAAGAGCCTGAGACTCGACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000602447.5
ENST00000684092.1
CDS GCA 90 bp AGTCATTTGCCAGGCATCTCGGGCAGCCACAGAACTAGTTCCTATTaGAGCACTGGTAATGGCTTCGCCAATAGTGAACTGAAGTTCTAT +
Preference number: 5 (lower is better)
Translates to: SHLPGISGSHRTSSY*STGNGFANSELKFY
Trigger: ATAGAACTTCAGTTCACTATTGGCGAAGCCATTACCAGTGCTGCAATAGGAACTAGTTCTGTGGCTGCCCGAGATGCCTGGCAAATGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000684092.1
CDS CCA 90 bp CCAACGCATTCCAAATACTTGTCATGGCCTGTCGAATGCCAAGGTTaGGATCAAACTGGTAACGATAAAGTCGAGGAACTAGCTGAGGCA +
Preference number: 5 (lower is better)
Translates to: PTHSKYLSWPVECQG*DQTGNDKVEELAEA
Trigger: TGCCTCAGCTAGTTCCTCGACTTTATCGTTACCAGTTTGATCCCAACCTTGGCATTCGACAGGCCATGACAAGTATTTGGAATGCGTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000684092.1
CDS-3UTR CAA 90 bp CCACTTGGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTGTCTCAGGCTCTTCCTaGCAAAGGGCTTCAAAAAGC +
Preference number: 5 (lower is better)
Translates to: PLGFSKNTTTSTPNEHGTVSGSS*QRASKS
Trigger: GCTTTTTGAAGCCCTTTGCAAGGAAGAGCCTGAGAC...AGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACCAAGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp TTTACAACCACCCCTCAAACATCCAAGGTTCCATTAAGCTCACTCAGCCCAGATGTCTCAGGCTCTTCCTaGCAAAGGGCTTCAAAAAGC +
Preference number: 5 (lower is better)
Translates to: FTTTPQTSKVPLSSLSPDVSGSS*QRASKS
Trigger: GCTTTTTGAAGCCCTTTGCAAGGAAGAGCCTGAGAC...ATCTGGGCTGAGTGAGCTTAATGGAACCTTGGATGTTTGAGGGGTGGTTGTAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp TTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGTTTCTGTGCAGGCAGCAATaGCCAGGAGGGGTGATGTAC +
Preference number: 5 (lower is better)
Translates to: FSKNTTTSTPNEHGTCLFLCRQQ*PGGVMY
Trigger: GTACATCACCCCTCCTGGCAATTGCTGCCTGCACAG...AAACAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp TTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGTTTCTTCCTCTTCAGTCATTaGCCAGGCATCTCGGGCAGC +
Preference number: 5 (lower is better)
Translates to: FQRTPPLQPPMNMALVCFFLFSH*PGISGS
Trigger: GCTGCCCGAGATGCCTGGCAAATGACTGAAGAGGAA...GAAACAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp CCACTTGGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTACCACATCATTCACTTaGGCTCCAGCAGGTGGAGTA +
Preference number: 5 (lower is better)
Translates to: PLGFSKNTTTSTPNEHGTTTSFT*APAGGV
Trigger: TACTCCACCTGCTGGAGCCAAAGTGAATGATGTGGT...AGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACCAAGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp GGGCATGGGCAACAGAAGGAAGGAGGAAAACCCCTAGTGGCAATGATTTACTTGTTATCCACCATGGATTaGTCAGTGACCAACGCATTC +
Preference number: 5 (lower is better)
Translates to: GHGQQKEGGKPLVAMIYLLSTMD*SVTNAF
Trigger: GAATGCGTTGGTCACTGACAAATCCATGGTGGATAA...CAAGTAAATCATTGCCACTAGGGGTTTTCCTCCTTCCTTCTGTTGCCCATGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp CCACTTGGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTATGGCTCCTGCACTTTaGCTGATCTTCACAAGGGTG +
Preference number: 5 (lower is better)
Translates to: PLGFSKNTTTSTPNEHGTMAPAL*LIFTRV
Trigger: CACCCTTGTGAAGATCAGCAAAAGTGCAGGAGCCAT...AGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACCAAGTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp TTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGTTTCTCTTCCAGCCAGGCCTaGCAGCAATGCGGTCAGTAT +
Preference number: 5 (lower is better)
Translates to: FQRTPPLQPPMNMALVCFSSSQA*QQCGQY
Trigger: ATACTGACCGCATTGCTGCAAGGCCTGGCTGGAAGA...GAAACAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000374383.1
CDS-3UTR CAA 90 bp GTACCTCATCTTGGAAGTTTCTTGGGTAAGCCGGGGTTAGCACTGATTTGGCAGTTCATTTGTGCTGGGTaGATTGGGCACAGACTTTTC +
Preference number: 5 (lower is better)
Translates to: VPHLGSFLGKPGLALIWQFICAG*IGHRLF
Trigger: GAAAAGTCTGTGCCCAATCAACCCAGCACAAATGAA...CTGCCAAATCAGTGCTAACCCCGGCTTACCCAAGAAACTTCCAAGATGAGGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp AGGAAGACGATTGGAATTATCCGAAGGAGACTGACTCTGTCCTCTCCATCTGTACCTCTTCATTTTTGGTaGTCCGGACCCCACTGCTTT +
Preference number: 5 (lower is better)
Translates to: RKTIGIIRRRLTLSSPSVPLHFW*SGPHCF
Trigger: AAAGCAGTGGGGTCCGGACAACCAAAAATGAAGAGG...TACAGATGGAGAGGACAGAGTCAGTCTCCTTCGGATAATTCCAATCGTCTTCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp AGGAAGACGATTGGAATTATCCGAAGGAGACTGACTCTGTCCTCTCCATCTGTACATCTTGGAAGTTTCTaGGGTAAGCCGGGGTTAGCA +
Preference number: 5 (lower is better)
Translates to: RKTIGIIRRRLTLSSPSVHLGSF*GKPGLA
Trigger: TGCTAACCCCGGCTTACCCAAGAAACTTCCAAGATG...TACAGATGGAGAGGACAGAGTCAGTCTCCTTCGGATAATTCCAATCGTCTTCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS TCA 90 bp ATTGATGCCATGGCAATTGCACCCTGGGCTTTCATTTTCCAGGACTaGGACTGCAAAGCCTTCTGGGTAATAGTAATTAACTCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: IDAMAIAPWAFIFQD*DCKAFWVIVINSCR
Trigger: CCTGCAGGAGTTAATTACTATTACCCAGAAGGCTTTGCAGTCTCAGTCCTGGAAAATGAAAGCCCAGGGTGCAATTGCCATGGCATCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000684092.1
CDS CCA 90 bp ATTCCTTCAGAACAGCTTGAAGAATTTCATTTGTGCTGGGTTGATTaGGCACAGACTTTTCCAGCTCTGCACTGCAAGCTGTCACCACAC +
Preference number: 5 (lower is better)
Translates to: IPSEQLEEFHLCWVD*AQTFPALHCKLSPH
Trigger: GTGTGGTGACAGCTTGCAGTGCAGAGCTGGAAAAGTCTGTGCCCAATCAACCCAGCACAAATGAAATTCTTCAAGCTGTTCTGAAGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000374383.1
ENST00000684092.1
CDS-3UTR CAA 90 bp TTTCCTCTTACCCTACACTTTCAGGCAGGGGCATGGGCAACAGAAGGAAGGAGGATGGAGAAGCTGATTTaGATGATTCAACAGGGTATT +
Preference number: 5 (lower is better)
Translates to: FPLTLHFQAGAWATEGRRMEKLI*MIQQGI
Trigger: AATACCCTGTTGAATCATCAAAATCAGCTTCTCCAT...CCTCCTTCCTTCTGTTGCCCATGCCCCTGCCTGAAAGTGTAGGGTAAGAGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp CAGATGGCCATAAAAGAAAGTATCCAGGGCCAGACATTAAACACCTGGGTTCTGGTCCCGGTCATGTACTaGACTGGAGTTTTCATTCGA +
Preference number: 5 (lower is better)
Translates to: QMAIKESIQGQTLNTWVLVPVMY*TGVFIR
Trigger: TCGAATGAAAACTCCAGTCAAGTACATGACCGGGAC...CAGAACCCAGGTGTTTAATGTCTGGCCCTGGATACTTTCTTTTATGGCCATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp CTATTTCTGCCAGTTTCCTTTACAACCACCCCTCAAACATCCAAGGTTCCATTACTGAATGAGTTCCTCTaGATCAGGGAGGGTGTCAGC +
Preference number: 5 (lower is better)
Translates to: LFLPVSFTTTPQTSKVPLLNEFL*IREGVS
Trigger: GCTGACACCCTCCCTGATCAAGAGGAACTCATTCAG...TAATGGAACCTTGGATGTTTGAGGGGTGGTTGTAAAGGAAACTGGCAGAAATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp TTTACAACCACCCCTCAAACATCCAAGGTTCCATTAAGCTCACTCAGCCCAGATAGAATCCATCAGACCTaGCAAGAGGAGTTTCTGGTG +
Preference number: 5 (lower is better)
Translates to: FTTTPQTSKVPLSSLSPDRIHQT*QEEFLV
Trigger: CACCAGAAACTCCTCTTGCAAGGTCTGATGGATTCT...ATCTGGGCTGAGTGAGCTTAATGGAACCTTGGATGTTTGAGGGGTGGTTGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp GGGCATGGGCAACAGAAGGAAGGAGGAAAACCCCTAGTGGCAATGATTTACTTGATTTTCACACAGACCTaGCTCAGAGTTTTCAGAGCT +
Preference number: 5 (lower is better)
Translates to: GHGQQKEGGKPLVAMIYLIFTQT*LRVFRA
Trigger: AGCTCTGAAAACTCTGAGCAAGGTCTGTGTGAAAAT...CAAGTAAATCATTGCCACTAGGGGTTTTCCTCCTTCCTTCTGTTGCCCATGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp GTACCTCATCTTGGAAGTTTCTTGGGTAAGCCGGGGTTAGCACTGATTTGGCAGATTTTCACACAGACCTaGCTCAGAGTTTTCAGAGCT +
Preference number: 5 (lower is better)
Translates to: VPHLGSFLGKPGLALIWQIFTQT*LRVFRA
Trigger: AGCTCTGAAAACTCTGAGCAAGGTCTGTGTGAAAAT...CTGCCAAATCAGTGCTAACCCCGGCTTACCCAAGAAACTTCCAAGATGAGGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp TTTACAACCACCCCTCAAACATCCAAGGTTCCATTAAGCTCACTCAGCCCAGATATCATTGGAGAAGATTaGGCAGCACTAAGCCGAGCA +
Preference number: 5 (lower is better)
Translates to: FTTTPQTSKVPLSSLSPDIIGED*AALSRA
Trigger: TGCTCGGCTTAGTGCTGCCAAATCTTCTCCAATGAT...ATCTGGGCTGAGTGAGCTTAATGGAACCTTGGATGTTTGAGGGGTGGTTGTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp TTTCCTCTTACCCTACACTTTCAGGCAGGGGCATGGGCAACAGAAGGAAGGAGGGAGGCAGGACTTCTTTaGCATGATTCTTTAATACAT +
Preference number: 5 (lower is better)
Translates to: FPLTLHFQAGAWATEGRREAGLL*HDSLIH
Trigger: ATGTATTAAAGAATCATGCAAAAGAAGTCCTGCCTC...CCTCCTTCCTTCTGTTGCCCATGCCCCTGCCTGAAAGTGTAGGGTAAGAGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp GGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGCCTCTTCATTTTTGGTaGTCCGGACCCCACTGCTTT +
Preference number: 5 (lower is better)
Translates to: GFSKNTTTSTPNEHGTCLPLHFW*SGPHCF
Trigger: AAAGCAGTGGGGTCCGGACAACCAAAAATGAAGAGG...CAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp CTGAATGTAAACCAGTCTTCTGCTCTGGAATCCAAGGTAAGCTACAGAGTTCTCTTCTCCTCTTCATTTTaGGTTGTCCGGACCCCACTG +
Preference number: 5 (lower is better)
Translates to: LNVNQSSALESKVSYRVLFSSSF*VVRTPL
Trigger: CAGTGGGGTCCGGACAACCAAAAATGAAGAGGAGAA...GAGAACTCTGTAGCTTACCTTGGATTCCAGAGCAGAAGACTGGTTTACATTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp GGAATCCAAGGTAAGCTACAGAGTTCTCAGTTTACCATCAACACTAAGGTTTTACTGACGATAACAACGTaGGGTCTCCGCGTTTCGCGG +
Preference number: 5 (lower is better)
Translates to: GIQGKLQSSQFTINTKVLLTITT*GLRVSR
Trigger: CCGCGAAACGCGGAGACCCAACGTTGTTATCGTCAG...TAAAACCTTAGTGTTGATGGTAAACTGAGAACTCTGTAGCTTACCTTGGATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp GGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGCATCTTGGAAGTTTCTaGGGTAAGCCGGGGTTAGCA +
Preference number: 5 (lower is better)
Translates to: GFSKNTTTSTPNEHGTCLHLGSF*GKPGLA
Trigger: TGCTAACCCCGGCTTACCCAAGAAACTTCCAAGATG...CAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS GCA 90 bp AATACACTTAAGGACTCTAGCAGAGCTGGAATGAGTTTTGGTGCATaGGGTTTCAACATGGCTCCTGCACTTTTGCTGATCTTCACAAGG +
Preference number: 5 (lower is better)
Translates to: NTLKDSSRAGMSFGA*GFNMAPALLLIFTR
Trigger: CCTTGTGAAGATCAGCAAAAGTGCAGGAGCCATGTTGAAACCGCATGCACCAAAACTCATTCCAGCTCTGCTAGAGTCCTTAAGTGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000684092.1
CDS CCA 90 bp GGTCCTGGTACTGAACCAACAGTGTCTCTACTGGAAGTTGTATTTTaGGGCGGCTTTTTATACGTTTATTCAGATGGACCAGCAGTTCCA +
Preference number: 5 (lower is better)
Translates to: GPGTEPTVSLLEVVF*GGFLYVYSDGPAVP
Trigger: TGGAACTGCTGGTCCATCTGAATAAACGTATAAAAAGCCGCCCCAAAATACAACTTCCAGTAGAGACACTGTTGGTTCAGTACCAGGACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000602447.5
ENST00000602978.1
ENST00000684092.1
CDS-3UTR CAA 90 bp CCACTTGGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTTTACGTACTCCTTCTaGGGTGCTAGAGAGTTTGAG +
Preference number: 5 (lower is better)
Translates to: PLGFSKNTTTSTPNEHGTFTYSF*GAREFE
Trigger: CTCAAACTCTCTAGCACCCAAGAAGGAGTACGTAAA...AGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACCAAGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp GGGCATGGGCAACAGAAGGAAGGAGGAAAACCCCTAGTGGCAATGATTTACTTGTATTCATTGATTAGCTaGGTGAGGCCATTCAAAAGC +
Preference number: 5 (lower is better)
Translates to: GHGQQKEGGKPLVAMIYLYSLIS*VRPFKS
Trigger: GCTTTTGAATGGCCTCACCAAGCTAATCAATGAATA...CAAGTAAATCATTGCCACTAGGGGTTTTCCTCCTTCCTTCTGTTGCCCATGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp CTGAATGTAAACCAGTCTTCTGCTCTGGAATCCAAGGTAAGCTACAGAGTTCTCACGCATTCCAAATACTaGTCATGGCCTGTCGAATGC +
Preference number: 5 (lower is better)
Translates to: LNVNQSSALESKVSYRVLTHSKY*SWPVEC
Trigger: GCATTCGACAGGCCATGACAAGTATTTGGAATGCGT...GAGAACTCTGTAGCTTACCTTGGATTCCAGAGCAGAAGACTGGTTTACATTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp GGGCATGGGCAACAGAAGGAAGGAGGAAAACCCCTAGTGGCAATGATTTACTTGTATTGCAGGCACATGTaGATTGTTTCCATCATTGGA +
Preference number: 5 (lower is better)
Translates to: GHGQQKEGGKPLVAMIYLYCRHM*IVSIIG
Trigger: TCCAATGATGGAAACAATCAACATGTGCCTGCAATA...CAAGTAAATCATTGCCACTAGGGGTTTTCCTCCTTCCTTCTGTTGCCCATGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp AGGAAGACGATTGGAATTATCCGAAGGAGACTGACTCTGTCCTCTCCATCTGTATCCATATACCACCCATaGAGCTTCTGCAGGAGTTTT +
Preference number: 5 (lower is better)
Translates to: RKTIGIIRRRLTLSSPSVSIYHP*SFCRSF
Trigger: AAAACTCCTGCAGAAGCTCAATGGGTGGTATATGGA...TACAGATGGAGAGGACAGAGTCAGTCTCCTTCGGATAATTCCAATCGTCTTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp GATTTGGCAGATGGCCATAAAAGAAAGTATCCAGGGCCAGACATTAAACACCTGTTGATGCCATGGCAATaGCACCCTGGGCTTTCATTT +
Preference number: 5 (lower is better)
Translates to: DLADGHKRKYPGPDIKHLLMPWQ*HPGLSF
Trigger: AAATGAAAGCCCAGGGTGCAATTGCCATGGCATCAA...CAGGTGTTTAATGTCTGGCCCTGGATACTTTCTTTTATGGCCATCTGCCAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp GGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGTTGATGCCATGGCAATaGCACCCTGGGCTTTCATTT +
Preference number: 5 (lower is better)
Translates to: GFSKNTTTSTPNEHGTCLLMPWQ*HPGLSF
Trigger: AAATGAAAGCCCAGGGTGCAATTGCCATGGCATCAA...CAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000374383.1
CDS-3UTR CAA 90 bp AGGAAGACGATTGGAATTATCCGAAGGAGACTGACTCTGTCCTCTCCATCTGTATGGAATCTGTCCTCTTaGGTGGCCTTCAAGATATCA +
Preference number: 5 (lower is better)
Translates to: RKTIGIIRRRLTLSSPSVWNLSS*VAFKIS
Trigger: TGATATCTTGAAGGCCACCAAAGAGGACAGATTCCA...TACAGATGGAGAGGACAGAGTCAGTCTCCTTCGGATAATTCCAATCGTCTTCCT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp CTTGGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTGGGGTTAGCACTGATTaGGCAGATGGCCATAAAAGA +
Preference number: 5 (lower is better)
Translates to: LGFSKNTTTSTPNEHGTCGVSTD*ADGHKR
Trigger: TCTTTTATGGCCATCTGCCAAATCAGTGCTAACCCC...ACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS TCA 90 bp CCAAGTGGAGAACAGCTTCAAGTTCAGGCACCTGTTCAGCTTCTATaGATTTCACGATTCCCAATTTGCACTGTTCCAATTGTTCAGGTG +
Preference number: 5 (lower is better)
Translates to: PSGEQLQVQAPVQLL*ISRFPICTVPIVQV
Trigger: CACCTGAACAATTGGAACAGTGCAAATTGGGAATCGTGAAATTCATAGAAGCTGAACAGGTGCCTGAACTTGAAGCTGTTCTCCACTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000602447.5
ENST00000684092.1
CDS TCA 90 bp CCTTCCAAAGTACTATACGCTCCAACCATCATAGATAAAGCTTCTTaGATAGCAAGTCGAGTCTCAGGCTCTTCCTTGCAAAGGGCTTCA +
Preference number: 5 (lower is better)
Translates to: PSKVLYAPTIIDKAS*IASRVSGSSLQRAS
Trigger: TGAAGCCCTTTGCAAGGAAGAGCCTGAGACTCGACTTGCTATTCAAGAAGCTTTATCTATGATGGTTGGAGCGTATAGTACTTTGGAAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000602447.5
ENST00000684092.1
CDS GCA 90 bp TCTCATTTTCTTTTTAGCCAAATACCTTCCCACCGTGAATCCCAATaGAAGCAAGGATCCATGCTGTATCTCCGGGCTGTGATTGTCTTT +
Preference number: 5 (lower is better)
Translates to: SHFLFSQIPSHRESQ*KQGSMLYLRAVIVF
Trigger: AAAGACAATCACAGCCCGGAGATACAGCATGGATCCTTGCTTGCATTGGGATTCACGGTGGGAAGGTATTTGGCTAAAAAGAAAATGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000602447.5
ENST00000684092.1
CDS-3UTR CAA 90 bp CAGATGGCCATAAAAGAAAGTATCCAGGGCCAGACATTAAACACCTGGGTTCTGACTGGAAGTTGTATTTaGGGGCGGCTTTTTATACGT +
Preference number: 5 (lower is better)
Translates to: QMAIKESIQGQTLNTWVLTGSCI*GRLFIR
Trigger: ACGTATAAAAAGCCGCCCCAAAATACAACTTCCAGT...CAGAACCCAGGTGTTTAATGTCTGGCCCTGGATACTTTCTTTTATGGCCATCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp GTACCTCATCTTGGAAGTTTCTTGGGTAAGCCGGGGTTAGCACTGATTTGGCAGATGGAGAAGCTGATTTaGATGATTCAACAGGGTATT +
Preference number: 5 (lower is better)
Translates to: VPHLGSFLGKPGLALIWQMEKLI*MIQQGI
Trigger: AATACCCTGTTGAATCATCAAAATCAGCTTCTCCAT...CTGCCAAATCAGTGCTAACCCCGGCTTACCCAAGAAACTTCCAAGATGAGGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp TGTTTAGCTTCTGGCTTTCAGAAACCCAATGGTAAGGGTCAGTTTAGTTCTGGCTTTGCACTGTTCCAATaGTTCAGGTGTCCATGGGTT +
Preference number: 5 (lower is better)
Translates to: CLASGFQKPNGKGQFSSGFALFQ*FRCPWV
Trigger: AACCCATGGACACCTGAACAATTGGAACAGTGCAAA...GCCAGAACTAAACTGACCCTTACCATTGGGTTTCTGAAAGCCAGAAGCTAAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp CTTGGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTGAACTGCACCCTCTTTaGTCTTCAGTGGTATATCTC +
Preference number: 5 (lower is better)
Translates to: LGFSKNTTTSTPNEHGTCELHPL*SSVVYL
Trigger: GAGATATACCACTGAAGACAAAAGAGGGTGCAGTTC...ACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACCAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp GGGCATGGGCAACAGAAGGAAGGAGGAAAACCCCTAGTGGCAATGATTTACTTGCCTAATGGCTTAATCTaGATTTCTGGACAGGTTATA +
Preference number: 5 (lower is better)
Translates to: GHGQQKEGGKPLVAMIYLPNGLI*ISGQVI
Trigger: TATAACCTGTCCAGAAATCAAGATTAAGCCATTAGG...CAAGTAAATCATTGCCACTAGGGGTTTTCCTCCTTCCTTCTGTTGCCCATGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp TTTACAACCACCCCTCAAACATCCAAGGTTCCATTAAGCTCACTCAGCCCAGATAAATTTCACAGCCACTaGTCGAACTTGAACTTCAGG +
Preference number: 5 (lower is better)
Translates to: FTTTPQTSKVPLSSLSPDKFHSH*SNLNFR
Trigger: CCTGAAGTTCAAGTTCGACAAGTGGCTGTGAAATTT...ATCTGGGCTGAGTGAGCTTAATGGAACCTTGGATGTTTGAGGGGTGGTTGTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp CAGATGGCCATAAAAGAAAGTATCCAGGGCCAGACATTAAACACCTGGGTTCTGCATTCCCCGACACTGTaGATACCACTACAGAATAAA +
Preference number: 5 (lower is better)
Translates to: QMAIKESIQGQTLNTWVLHSPTL*IPLQNK
Trigger: TTTATTCTGTAGTGGTATCAACAGTGTCGGGGAATG...CAGAACCCAGGTGTTTAATGTCTGGCCCTGGATACTTTCTTTTATGGCCATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp CAGATGGCCATAAAAGAAAGTATCCAGGGCCAGACATTAAACACCTGGGTTCTGTCTACAAGATGCAATTaGGTAAAGCCAGATCCCTCA +
Preference number: 5 (lower is better)
Translates to: QMAIKESIQGQTLNTWVLSTRCN*VKPDPS
Trigger: TGAGGGATCTGGCTTTACCAAATTGCATCTTGTAGA...CAGAACCCAGGTGTTTAATGTCTGGCCCTGGATACTTTCTTTTATGGCCATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp TTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGTTTCAGAATCCATCAGACCTaGCAAGAGGAGTTTCTGGTG +
Preference number: 5 (lower is better)
Translates to: FQRTPPLQPPMNMALVCFRIHQT*QEEFLV
Trigger: CACCAGAAACTCCTCTTGCAAGGTCTGATGGATTCT...GAAACAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp TTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGTTTCACGCATTCCAAATACTaGTCATGGCCTGTCGAATGC +
Preference number: 5 (lower is better)
Translates to: FQRTPPLQPPMNMALVCFTHSKY*SWPVEC
Trigger: GCATTCGACAGGCCATGACAAGTATTTGGAATGCGT...GAAACAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp GGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGTTATCCACCATGGATTaGTCAGTGACCAACGCATTC +
Preference number: 5 (lower is better)
Translates to: GFSKNTTTSTPNEHGTCLLSTMD*SVTNAF
Trigger: GAATGCGTTGGTCACTGACAAATCCATGGTGGATAA...CAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp CTTGGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTCATTTGTGCTGGGTaGATTGGGCACAGACTTTTC +
Preference number: 5 (lower is better)
Translates to: LGFSKNTTTSTPNEHGTCFICAG*IGHRLF
Trigger: GAAAAGTCTGTGCCCAATCAACCCAGCACAAATGAA...ACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACCAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000374383.1
CDS-3UTR CAA 90 bp GGGCATGGGCAACAGAAGGAAGGAGGAAAACCCCTAGTGGCAATGATTTACTTGTTCCTTCAGAACAGCTaGAAGAATTTCATTTGTGCT +
Preference number: 5 (lower is better)
Translates to: GHGQQKEGGKPLVAMIYLFLQNS*KNFICA
Trigger: AGCACAAATGAAATTCTTCAAGCTGTTCTGAAGGAA...CAAGTAAATCATTGCCACTAGGGGTTTTCCTCCTTCCTTCTGTTGCCCATGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp GGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGTGGAATCTGTCCTCTTaGGTGGCCTTCAAGATATCA +
Preference number: 5 (lower is better)
Translates to: GFSKNTTTSTPNEHGTCLWNLSS*VAFKIS
Trigger: TGATATCTTGAAGGCCACCAAAGAGGACAGATTCCA...CAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000374383.1
CDS GCA 90 bp TATTCCAGATTTTCAAGTGTTTTCTTCAGTAACGCTGCTTTCTCCTaGAGTTCAGGTCTGCTGTCTGGCTCCATAGTAGCTAAAGACTCA +
Preference number: 5 (lower is better)
Translates to: YSRFSSVFFSNAAFS*SSGLLSGSIVAKDS
Trigger: TGAGTCTTTAGCTACTATGGAGCCAGACAGCAGACCTGAACTGCAGGAGAAAGCAGCGTTACTGAAGAAAACACTTGAAAATCTGGAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000684092.1
CDS-3UTR CAA 90 bp TTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGTTTCTTTGCACTGTTCCAATaGTTCAGGTGTCCATGGGTT +
Preference number: 5 (lower is better)
Translates to: FQRTPPLQPPMNMALVCFFALFQ*FRCPWV
Trigger: AACCCATGGACACCTGAACAATTGGAACAGTGCAAA...GAAACAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp GGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGTCCTCTTTGTATTCATaGATTAGCTTGGTGAGGCCA +
Preference number: 5 (lower is better)
Translates to: GFSKNTTTSTPNEHGTCLSSLYS*ISLVRP
Trigger: TGGCCTCACCAAGCTAATCAATGAATACAAAGAGGA...CAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp CTTGGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTAAATTTCACAGCCACTaGTCGAACTTGAACTTCAGG +
Preference number: 5 (lower is better)
Translates to: LGFSKNTTTSTPNEHGTCKFHSH*SNLNFR
Trigger: CCTGAAGTTCAAGTTCGACAAGTGGCTGTGAAATTT...ACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp GGAATCCAAGGTAAGCTACAGAGTTCTCAGTTTACCATCAACACTAAGGTTTTATTAGTCTCCCCACTCTaGTTAGATGATGAGGGTGCC +
Preference number: 5 (lower is better)
Translates to: GIQGKLQSSQFTINTKVLLVSPL*LDDEGA
Trigger: GGCACCCTCATCATCTAACAAGAGTGGGGAGACTAA...TAAAACCTTAGTGTTGATGGTAAACTGAGAACTCTGTAGCTTACCTTGGATTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp GATTTGGCAGATGGCCATAAAAGAAAGTATCCAGGGCCAGACATTAAACACCTGTCTACAAGATGCAATTaGGTAAAGCCAGATCCCTCA +
Preference number: 5 (lower is better)
Translates to: DLADGHKRKYPGPDIKHLSTRCN*VKPDPS
Trigger: TGAGGGATCTGGCTTTACCAAATTGCATCTTGTAGA...CAGGTGTTTAATGTCTGGCCCTGGATACTTTCTTTTATGGCCATCTGCCAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp TTAACGTCAATAAGGATGAGTACTGAATGTAAACCAGTCTTCTGCTCTGGAATCATGGCTCCTGCACTTTaGCTGATCTTCACAAGGGTG +
Preference number: 5 (lower is better)
Translates to: LTSIRMSTECKPVFCSGIMAPAL*LIFTRV
Trigger: CACCCTTGTGAAGATCAGCAAAAGTGCAGGAGCCAT...GATTCCAGAGCAGAAGACTGGTTTACATTCAGTACTCATCCTTATTGACGTTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp TTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGTTTCTTCATTTGTGCTGGGTaGATTGGGCACAGACTTTTC +
Preference number: 5 (lower is better)
Translates to: FQRTPPLQPPMNMALVCFFICAG*IGHRLF
Trigger: GAAAAGTCTGTGCCCAATCAACCCAGCACAAATGAA...GAAACAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000374383.1
CDS-3UTR CAA 90 bp GGAATCCAAGGTAAGCTACAGAGTTCTCAGTTTACCATCAACACTAAGGTTTTATTCTCCTCTTCATTTTaGGTTGTCCGGACCCCACTG +
Preference number: 5 (lower is better)
Translates to: GIQGKLQSSQFTINTKVLFSSSF*VVRTPL
Trigger: CAGTGGGGTCCGGACAACCAAAAATGAAGAGGAGAA...TAAAACCTTAGTGTTGATGGTAAACTGAGAACTCTGTAGCTTACCTTGGATTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS GCA 90 bp TCTGTCCTCTTTGGTGGCCTTCAAGATATCAGCTGCACAGCTGATTaGTACAATCTTGTATTTGACATTCTCTTTGCTACATTCCTTCAG +
Preference number: 5 (lower is better)
Translates to: SVLFGGLQDISCTAD*YNLVFDILFATFLQ
Trigger: CTGAAGGAATGTAGCAAAGAGAATGTCAAATACAAGATTGTAGCAATCAGCTGTGCAGCTGATATCTTGAAGGCCACCAAAGAGGACAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000374383.1
ENST00000465499.1
ENST00000684092.1
CDS-3UTR CAA 90 bp TGTTTAGCTTCTGGCTTTCAGAAACCCAATGGTAAGGGTCAGTTTAGTTCTGGCTTCACGATTCCCAATTaGCACTGTTCCAATTGTTCA +
Preference number: 5 (lower is better)
Translates to: CLASGFQKPNGKGQFSSGFTIPN*HCSNCS
Trigger: TGAACAATTGGAACAGTGCAAATTGGGAATCGTGAA...GCCAGAACTAAACTGACCCTTACCATTGGGTTTCTGAAAGCCAGAAGCTAAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp CCACTTGGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTCTCCAAGGTACACCTaGTACATCTTATTAATGATG +
Preference number: 5 (lower is better)
Translates to: PLGFSKNTTTSTPNEHGTSPRYT*YILLMM
Trigger: CATCATTAATAAGATGTACAAGGTGTACCTTGGAGA...AGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACCAAGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp TTAACGTCAATAAGGATGAGTACTGAATGTAAACCAGTCTTCTGCTCTGGAATCGTCCCGGTCATGTACTaGACTGGAGTTTTCATTCGA +
Preference number: 5 (lower is better)
Translates to: LTSIRMSTECKPVFCSGIVPVMY*TGVFIR
Trigger: TCGAATGAAAACTCCAGTCAAGTACATGACCGGGAC...GATTCCAGAGCAGAAGACTGGTTTACATTCAGTACTCATCCTTATTGACGTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp CTGAATGTAAACCAGTCTTCTGCTCTGGAATCCAAGGTAAGCTACAGAGTTCTCATCCCAGTGTTTGGATaGCTCGTTCTTTCATCTTAT +
Preference number: 5 (lower is better)
Translates to: LNVNQSSALESKVSYRVLIPVFG*LVLSSY
Trigger: ATAAGATGAAAGAACGAGCAATCCAAACACTGGGAT...GAGAACTCTGTAGCTTACCTTGGATTCCAGAGCAGAAGACTGGTTTACATTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp AGGAAGACGATTGGAATTATCCGAAGGAGACTGACTCTGTCCTCTCCATCTGTAAAAATATCCCAGTGTTaGGATTGCTCGTTCTTTCAT +
Preference number: 5 (lower is better)
Translates to: RKTIGIIRRRLTLSSPSVKISQC*DCSFFH
Trigger: ATGAAAGAACGAGCAATCCAAACACTGGGATATTTT...TACAGATGGAGAGGACAGAGTCAGTCTCCTTCGGATAATTCCAATCGTCTTCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp CCACTTGGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTCATGTTTAACTCTTTaGCCAGTCATAAGTGTTTCC +
Preference number: 5 (lower is better)
Translates to: PLGFSKNTTTSTPNEHGTSCLTL*PVISVS
Trigger: GGAAACACTTATGACTGGCAAAAGAGTTAAACATGA...AGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACCAAGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp TTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGTTTTCCATATACCACCCATaGAGCTTCTGCAGGAGTTTT +
Preference number: 5 (lower is better)
Translates to: FSKNTTTSTPNEHGTCLFSIYHP*SFCRSF
Trigger: AAAACTCCTGCAGAAGCTCAATGGGTGGTATATGGA...AAACAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp CCACTTGGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTTCCTTCAGAACAGCTaGAAGAATTTCATTTGTGCT +
Preference number: 5 (lower is better)
Translates to: PLGFSKNTTTSTPNEHGTFLQNS*KNFICA
Trigger: AGCACAAATGAAATTCTTCAAGCTGTTCTGAAGGAA...AGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACCAAGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000374383.1
CDS-3UTR CAA 90 bp TTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGTTTTGGAATCTGTCCTCTTaGGTGGCCTTCAAGATATCA +
Preference number: 5 (lower is better)
Translates to: FSKNTTTSTPNEHGTCLFWNLSS*VAFKIS
Trigger: TGATATCTTGAAGGCCACCAAAGAGGACAGATTCCA...AAACAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000374383.1
CDS-3UTR CAA 90 bp CTTGGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTCAAGTGAGTTCTTCTaGATGAGAGGTATGACAATG +
Preference number: 5 (lower is better)
Translates to: LGFSKNTTTSTPNEHGTCSSEFF*MRGMTM
Trigger: CATTGTCATACCTCTCATCAAGAAGAACTCACTTGA...ACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp CCACTTGGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTATTTTGTTTCTGGTTTaGCAAAATATGCAGCCACAG +
Preference number: 5 (lower is better)
Translates to: PLGFSKNTTTSTPNEHGTILFLV*QNMQPQ
Trigger: CTGTGGCTGCATATTTTGCAAAACCAGAAACAAAAT...AGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACCAAGTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS TCA 90 bp ATTCATTTAACACGTAACCATAAGGCATCAGAAGGACATCTAGCATaGAGTCCAAAAGCAGCTGCACAGTCTTTGGTTTCTCAGCAAGAT +
Preference number: 5 (lower is better)
Translates to: IHLTRNHKASEGHLA*SPKAAAQSLVSQQD
Trigger: ATCTTGCTGAGAAACCAAAGACTGTGCAGCTGCTTTTGGACTTCATGCTAGATGTCCTTCTGATGCCTTATGGTTACGTGTTAAATGAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000602447.5
ENST00000684092.1
CDS-3UTR CAA 90 bp TTAACGTCAATAAGGATGAGTACTGAATGTAAACCAGTCTTCTGCTCTGGAATCTTTACGTACTCCTTCTaGGGTGCTAGAGAGTTTGAG +
Preference number: 5 (lower is better)
Translates to: LTSIRMSTECKPVFCSGIFTYSF*GAREFE
Trigger: CTCAAACTCTCTAGCACCCAAGAAGGAGTACGTAAA...GATTCCAGAGCAGAAGACTGGTTTACATTCAGTACTCATCCTTATTGACGTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp CTATTTCTGCCAGTTTCCTTTACAACCACCCCTCAAACATCCAAGGTTCCATTATTCACGATTCCCAATTaGCACTGTTCCAATTGTTCA +
Preference number: 5 (lower is better)
Translates to: LFLPVSFTTTPQTSKVPLFTIPN*HCSNCS
Trigger: TGAACAATTGGAACAGTGCAAATTGGGAATCGTGAA...TAATGGAACCTTGGATGTTTGAGGGGTGGTTGTAAAGGAAACTGGCAGAAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp CTGAATGTAAACCAGTCTTCTGCTCTGGAATCCAAGGTAAGCTACAGAGTTCTCTCTCCAAGGTACACCTaGTACATCTTATTAATGATG +
Preference number: 5 (lower is better)
Translates to: LNVNQSSALESKVSYRVLSPRYT*YILLMM
Trigger: CATCATTAATAAGATGTACAAGGTGTACCTTGGAGA...GAGAACTCTGTAGCTTACCTTGGATTCCAGAGCAGAAGACTGGTTTACATTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp GGAATCCAAGGTAAGCTACAGAGTTCTCAGTTTACCATCAACACTAAGGTTTTAGAACTGCACCCTCTTTaGTCTTCAGTGGTATATCTC +
Preference number: 5 (lower is better)
Translates to: GIQGKLQSSQFTINTKVLELHPL*SSVVYL
Trigger: GAGATATACCACTGAAGACAAAAGAGGGTGCAGTTC...TAAAACCTTAGTGTTGATGGTAAACTGAGAACTCTGTAGCTTACCTTGGATTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp CTTGGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTCCTAATGGCTTAATCTaGATTTCTGGACAGGTTATA +
Preference number: 5 (lower is better)
Translates to: LGFSKNTTTSTPNEHGTCPNGLI*ISGQVI
Trigger: TATAACCTGTCCAGAAATCAAGATTAAGCCATTAGG...ACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACCAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp TTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGTTTCTATTCATTGATTAGCTaGGTGAGGCCATTCAAAAGC +
Preference number: 5 (lower is better)
Translates to: FQRTPPLQPPMNMALVCFYSLIS*VRPFKS
Trigger: GCTTTTGAATGGCCTCACCAAGCTAATCAATGAATA...GAAACAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp CTTGGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTAGTTTAGGGTCCTCTTaGTATTCATTGATTAGCTTG +
Preference number: 5 (lower is better)
Translates to: LGFSKNTTTSTPNEHGTCSLGSS*YSLISL
Trigger: CAAGCTAATCAATGAATACAAAGAGGACCCTAAACT...ACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACCAAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp GATGCTAAACAATCATTTTCTCCAAATCAACCACCTAAACACATGACAAGACAAGTGCCATCTGCCCGCTaGACATTAAAGTCCGTATGT +
Preference number: 5 (lower is better)
Translates to: DAKQSFSPNQPPKHMTRQVPSAR*TLKSVC
Trigger: ACATACGGACTTTAATGTCAAGCGGGCAGATGGCAC...TTGTCTTGTCATGTGTTTAGGTGGTTGATTTGGAGAAAATGATTGTTTAGCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp TTAACGTCAATAAGGATGAGTACTGAATGTAAACCAGTCTTCTGCTCTGGAATCCGAACTCGCCACATATaGCTTGTAAGGTTCTTAACC +
Preference number: 5 (lower is better)
Translates to: LTSIRMSTECKPVFCSGIRTRHI*LVRFLT
Trigger: GGTTAAGAACCTTACAAGCAATATGTGGCGAGTTCG...GATTCCAGAGCAGAAGACTGGTTTACATTCAGTACTCATCCTTATTGACGTTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp GGTTTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGGAGGCAGGACTTCTTTaGCATGATTCTTTAATACAT +
Preference number: 5 (lower is better)
Translates to: GFSKNTTTSTPNEHGTCLEAGLL*HDSLIH
Trigger: ATGTATTAAAGAATCATGCAAAAGAAGTCCTGCCTC...CAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAAACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp GATTTGGCAGATGGCCATAAAAGAAAGTATCCAGGGCCAGACATTAAACACCTGTTCCTTCAGAACAGCTaGAAGAATTTCATTTGTGCT +
Preference number: 5 (lower is better)
Translates to: DLADGHKRKYPGPDIKHLFLQNS*KNFICA
Trigger: AGCACAAATGAAATTCTTCAAGCTGTTCTGAAGGAA...CAGGTGTTTAATGTCTGGCCCTGGATACTTTCTTTTATGGCCATCTGCCAAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp TTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGTTTCTCAAGTGAGTTCTTCTaGATGAGAGGTATGACAATG +
Preference number: 5 (lower is better)
Translates to: FQRTPPLQPPMNMALVCFSSEFF*MRGMTM
Trigger: CATTGTCATACCTCTCATCAAGAAGAACTCACTTGA...GAAACAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp TTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGTTTCGGCAGTCTGCGATTTaGTTTCTGGTTTTGCAAAAT +
Preference number: 5 (lower is better)
Translates to: FSKNTTTSTPNEHGTCLFRQSAI*FLVLQN
Trigger: ATTTTGCAAAACCAGAAACAAAATCGCAGACTGCCG...AAACAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp CTATTTCTGCCAGTTTCCTTTACAACCACCCCTCAAACATCCAAGGTTCCATTAGTGGCAATGATTTACTaGGAGTGGTATCATGTTCTT +
Preference number: 5 (lower is better)
Translates to: LFLPVSFTTTPQTSKVPLVAMIY*EWYHVL
Trigger: AAGAACATGATACCACTCCAAGTAAATCATTGCCAC...TAATGGAACCTTGGATGTTTGAGGGGTGGTTGTAAAGGAAACTGGCAGAAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp TTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGTTTCAGTTTAGGGTCCTCTTaGTATTCATTGATTAGCTTG +
Preference number: 5 (lower is better)
Translates to: FQRTPPLQPPMNMALVCFSLGSS*YSLISL
Trigger: CAAGCTAATCAATGAATACAAAGAGGACCCTAAACT...GAAACAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp CTATTTCTGCCAGTTTCCTTTACAACCACCCCTCAAACATCCAAGGTTCCATTAAAAATATCCCAGTGTTaGGATTGCTCGTTCTTTCAT +
Preference number: 5 (lower is better)
Translates to: LFLPVSFTTTPQTSKVPLKISQC*DCSFFH
Trigger: ATGAAAGAACGAGCAATCCAAACACTGGGATATTTT...TAATGGAACCTTGGATGTTTGAGGGGTGGTTGTAAAGGAAACTGGCAGAAATAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp GATGCTAAACAATCATTTTCTCCAAATCAACCACCTAAACACATGACAAGACAAGGGGTTAGCACTGATTaGGCAGATGGCCATAAAAGA +
Preference number: 5 (lower is better)
Translates to: DAKQSFSPNQPPKHMTRQGVSTD*ADGHKR
Trigger: TCTTTTATGGCCATCTGCCAAATCAGTGCTAACCCC...TTGTCTTGTCATGTGTTTAGGTGGTTGATTTGGAGAAAATGATTGTTTAGCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp TTAACGTCAATAAGGATGAGTACTGAATGTAAACCAGTCTTCTGCTCTGGAATCCGGCAGTCTGCGATTTaGTTTCTGGTTTTGCAAAAT +
Preference number: 5 (lower is better)
Translates to: LTSIRMSTECKPVFCSGIRQSAI*FLVLQN
Trigger: ATTTTGCAAAACCAGAAACAAAATCGCAGACTGCCG...GATTCCAGAGCAGAAGACTGGTTTACATTCAGTACTCATCCTTATTGACGTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp TTAACGTCAATAAGGATGAGTACTGAATGTAAACCAGTCTTCTGCTCTGGAATCATCCCAGTGTTTGGATaGCTCGTTCTTTCATCTTAT +
Preference number: 5 (lower is better)
Translates to: LTSIRMSTECKPVFCSGIIPVFG*LVLSSY
Trigger: ATAAGATGAAAGAACGAGCAATCCAAACACTGGGAT...GATTCCAGAGCAGAAGACTGGTTTACATTCAGTACTCATCCTTATTGACGTTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp TTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGTTTTCATGTTTAACTCTTTaGCCAGTCATAAGTGTTTCC +
Preference number: 5 (lower is better)
Translates to: FSKNTTTSTPNEHGTCLFSCLTL*PVISVS
Trigger: GGAAACACTTATGACTGGCAAAAGAGTTAAACATGA...AAACAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp GATGCTAAACAATCATTTTCTCCAAATCAACCACCTAAACACATGACAAGACAACGAACTCGCCACATATaGCTTGTAAGGTTCTTAACC +
Preference number: 5 (lower is better)
Translates to: DAKQSFSPNQPPKHMTRQRTRHI*LVRFLT
Trigger: GGTTAAGAACCTTACAAGCAATATGTGGCGAGTTCG...TTGTCTTGTCATGTGTTTAGGTGGTTGATTTGGAGAAAATGATTGTTTAGCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp GGAATCCAAGGTAAGCTACAGAGTTCTCAGTTTACCATCAACACTAAGGTTTTATATTGCAGGCACATGTaGATTGTTTCCATCATTGGA +
Preference number: 5 (lower is better)
Translates to: GIQGKLQSSQFTINTKVLYCRHM*IVSIIG
Trigger: TCCAATGATGGAAACAATCAACATGTGCCTGCAATA...TAAAACCTTAGTGTTGATGGTAAACTGAGAACTCTGTAGCTTACCTTGGATTCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp TTTTCAAAGAACACCACCACTTCAACCCCCAATGAACATGGCACTTGTTTGTTTTCAAGTGTTTTCTTCTaGATGAGAGGTATGACAATG +
Preference number: 5 (lower is better)
Translates to: FSKNTTTSTPNEHGTCLFSSVFF*MRGMTM
Trigger: CATTGTCATACCTCTCATCAAGAAGAAAACACTTGA...AAACAAACAAGTGCCATGTTCATTGGGGGTTGAAGTGGTGGTGTTCTTTGAAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000374383.1
CDS-3UTR CAA 90 bp GATGCTAAACAATCATTTTCTCCAAATCAACCACCTAAACACATGACAAGACAACATTCCCCGACACTGTaGATACCACTACAGAATAAA +
Preference number: 5 (lower is better)
Translates to: DAKQSFSPNQPPKHMTRQHSPTL*IPLQNK
Trigger: TTTATTCTGTAGTGGTATCAACAGTGTCGGGGAATG...TTGTCTTGTCATGTGTTTAGGTGGTTGATTTGGAGAAAATGATTGTTTAGCATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS-3UTR CAA 90 bp GGAATCCAAGGTAAGCTACAGAGTTCTCAGTTTACCATCAACACTAAGGTTTTAATTTTGTTTCTGGTTTaGCAAAATATGCAGCCACAG +
Preference number: 5 (lower is better)
Translates to: GIQGKLQSSQFTINTKVLILFLV*QNMQPQ
Trigger: CTGTGGCTGCATATTTTGCAAAACCAGAAACAAAAT...TAAAACCTTAGTGTTGATGGTAAACTGAGAACTCTGTAGCTTACCTTGGATTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000259335.8
ENST00000338205.9
CDS CCA 90 bp ATACATGGTTTATCCAATCTTGACAAAAATCCTCGGGATCACCAATaGTACGTTCATCCACTCGTACATATGCAATTGTATAAAGAATCT +
Preference number: 5 (lower is better)
Translates to: IHGLSNLDKNPRDHQ*YVHPLVHMQLYKES
Trigger: AGATTCTTTATACAATTGCATATGTACGAGTGGATGAACGTACCATTGGTGATCCCGAGGATTTTTGTCAAGATTGGATAAACCATGTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000602978.1
ENST00000684092.1
CDS TCA 90 bp TCTCGAACTCGCCACATATTGCTTGTAAGGTTCTTAACCAAATCTTaGAGAATTTCTTTCAAATATTTATCCACCATGGATTTGTCAGTG +
Preference number: 5 (lower is better)
Translates to: SRTRHILLVRFLTKS*RISFKYLSTMDLSV
Trigger: CACTGACAAATCCATGGTGGATAAATATTTGAAAGAAATTCTTCAAGATTTGGTTAAGAACCTTACAAGCAATATGTGGCGAGTTCGAGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000684092.1
CDS TCA 72 bp GCCAGTCCCCCGCGGCCCGGGGGCGGGCCTCTGACCTaGGTCGGAGCCGGTCTCCATGCCGCGGACGCTGCG +
Preference number: 6 (lower is better)
Translates to: ASPPRPGGGPLT*VGAGLHAADAA
Trigger: CGCAGCGTCCGCGGCATGGAGACCGGCTCCGACTCAGGTCAGAGGCCCGCCCCCGGGCCGCGGGGGACTGGC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000259335.8
CDS GCA 72 bp GACCTGAGTCGGAGCCGGTCTCCATGCCGCGGACGCTaGGCTCGGCGCCGCGAGGTGAGGGCTGTAGAGCGA +
Preference number: 6 (lower is better)
Translates to: DLSRSRSPCRGR*ARRREVRAVER
Trigger: TCGCTCTACAGCCCTCACCTCGCGGCGCCGAGCGCAGCGTCCGCGGCATGGAGACCGGCTCCGACTCAGGTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000259335.8
CDS GCA 72 bp GCAGTCCGTGAGGGGCTGGGCCGAGCGGGCCCGGGCTaGCACGCCTGTCCAAAGGAAGAGACGTGGACTCAG +
Preference number: 6 (lower is better)
Translates to: AVREGLGRAGPG*HACPKEETWTQ
Trigger: CTGAGTCCACGTCTCTTCCTTTGGACAGGCGTGGCAGCCCGGGCCCGCTCGGCCCAGCCCCTCACGGACTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259335.8
CDS GCA 72 bp GATCTGAGTCGGAGCCGGTCTCCATGCCGCGGACGCTaGGCTCGGCGCCGCGAGGTGAGGGCTGTAGAGCGA +
Preference number: 6 (lower is better)
Translates to: DLSRSRSPCRGR*ARRREVRAVER
Trigger: TCGCTCTACAGCCCTCACCTCGCGGCGCCGAGCGCAGCGTCCGCGGCATGGAGACCGGCTCCGACTCAGATC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000338205.9
CDS GCA 72 bp AATCTGAGTCGGAGCCGGTCTCCATGCCGCGGACGCTaGGCTCGGCGCCGCGAGGTGAGGGCTGTAGAGCGA +
Preference number: 6 (lower is better)
Translates to: NLSRSRSPCRGR*ARRREVRAVER
Trigger: TCGCTCTACAGCCCTCACCTCGCGGCGCCGAGCGCAGCGTCCGCGGCATGGAGACCGGCTCCGACTCAGATT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684092.1
CDS CCA 72 bp TGCGCCGCAGCGGCCCCCGACAGCCCAGTTCTGGTGTaGAGGTGGCTGGTGCTCCCAAAACGGCCTATGTTC +
Preference number: 6 (lower is better)
Translates to: CAAAAPDSPVLV*RWLVLPKRPMF
Trigger: GAACATAGGCCGTTTTGGGAGCACCAGCCACCTCCACACCAGAACTGGGCTGTCGGGGGCCGCTGCGGCGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000259335.8
CDS CCA 72 bp CGGAGCGCCCTTTTCCGAGGTCTGCGGCTGTCACGTTaGCTGGGCCCGACCTGGGGAAACACGCCTGTCCAA +
Preference number: 6 (lower is better)
Translates to: RSALFRGLRLSR*LGPTWGNTPVQ
Trigger: TTGGACAGGCGTGTTTCCCCAGGTCGGGCCCAGCCAACGTGACAGCCGCAGACCTCGGAAAAGGGCGCTCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684092.1
CDS CCA 72 bp GGCCCGGGCTGCCACGCCTGTCCAAAGGAAGAGACGTaGACTCAGAAAAGTAGAGCCGGGCTCGGAGTCGGC +
Preference number: 6 (lower is better)
Translates to: GPGCHACPKEET*TQKSRAGLGVG
Trigger: GCCGACTCCGAGCCCGGCTCTACTTTTCTGAGTCCACGTCTCTTCCTTTGGACAGGCGTGGCAGCCCGGGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000259335.8
CDS CCA 72 bp GCGCCCTTTTCCGAGGTCTGCGGCTGTCACGTTGGCTaGGCCCGACCTGGGGAAACACGCCTGTCCAAAGGA +
Preference number: 6 (lower is better)
Translates to: APFSEVCGCHVG*ARPGETRLSKG
Trigger: TCCTTTGGACAGGCGTGTTTCCCCAGGTCGGGCCCAGCCAACGTGACAGCCGCAGACCTCGGAAAAGGGCGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000684092.1
CDS CCA 72 bp CGAGGTCTGCGGCTGTCACGTTGGCTGGGCCCGACCTaGGGAAACACGCCTGTCCAAAGGAAGAGACGTGGA +
Preference number: 6 (lower is better)
Translates to: RGLRLSRWLGPT*GNTPVQRKRRG
Trigger: TCCACGTCTCTTCCTTTGGACAGGCGTGTTTCCCCAGGTCGGGCCCAGCCAACGTGACAGCCGCAGACCTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684092.1
CDS GCA 72 bp AGGTGGGCACCACCCCCGCACTGTGCGCAAGGCACATaGGCAAGTACAGAACGATCTCTCCAAAGGCTGCTG +
Preference number: 6 (lower is better)
Translates to: RWAPPPHCAQGT*ASTERSLQRLL
Trigger: CAGCAGCCTTTGGAGAGATCGTTCTGTACTTGCGCATGTGCCTTGCGCACAGTGCGGGGGTGGTGCCCACCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000602447.5
ENST00000684092.1
CDS CCA 72 bp GGGCATGATCCTGCATATCAGCCAAACTCTGAGAGGTaGGCACCACCCCCGCACTGTGCGCAAGGCACATGC +
Preference number: 6 (lower is better)
Translates to: GHDPAYQPNSER*APPPHCAQGTC
Trigger: GCATGTGCCTTGCGCACAGTGCGGGGGTGGTGCCCACCTCTCAGAGTTTGGCTGATATGCAGGATCATGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000602447.5
ENST00000684092.1
CDS CCA 72 bp TTCCTTTGTCCAGAAGGCAAGGCAGAAGGGCAGCGATaGTTCTCTGGCCAGCTGCTCCTTTGGCAGGGTCAC +
Preference number: 6 (lower is better)
Translates to: FLCPEGKAEGQR*FSGQLLLWQGH
Trigger: GTGACCCTGCCAAAGGAGCAGCTGGCCAGAGAACCATCGCTGCCCTTCTGCCTTGCCTTCTGGACAAAGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000684092.1
CDS GCA 72 bp GCAAGGCAGAAGGGCAGCGATGGTTCTCTGGCCAGCTaGTCCTTTGGCAGGGTCACACATTTTCACACAGAC +
Preference number: 6 (lower is better)
Translates to: ARQKGSDGSLAS*SFGRVTHFHTD
Trigger: GTCTGTGTGAAAATGTGTGACCCTGCCAAAGGAGCAGCTGGCCAGAGAACCATCGCTGCCCTTCTGCCTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000684092.1
CDS CCA 72 bp TCCAGAAGGCAAGGCAGAAGGGCAGCGATGGTTCTCTaGCCAGCTGCTCCTTTGGCAGGGTCACACATTTTC +
Preference number: 6 (lower is better)
Translates to: SRRQGRRAAMVL*PAAPLAGSHIF
Trigger: GAAAATGTGTGACCCTGCCAAAGGAGCAGCTGGCCAGAGAACCATCGCTGCCCTTCTGCCTTGCCTTCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000684092.1
CDS CAA 72 bp AGAAGGGCAGCGATGGTTCTCTGGCCAGCTGCTCCTTaGGCAGGGTCACACATTTTCACACAGACCTTGCTC +
Preference number: 6 (lower is better)
Translates to: RRAAMVLWPAAP*AGSHIFTQTLL
Trigger: GAGCAAGGTCTGTGTGAAAATGTGTGACCCTGCCAAAGGAGCAGCTGGCCAGAGAACCATCGCTGCCCTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000684092.1
CDS CAA 72 bp CTCCTCCTTTCCTGCCCACGTTCTTCCAGCCAGGCCTaGCAGCAATGCGGTCAGTATCATTCCGAGATATGG +
Preference number: 6 (lower is better)
Translates to: LLLSCPRSSSQA*QQCGQYHSEIW
Trigger: CCATATCTCGGAATGATACTGACCGCATTGCTGCAAGGCCTGGCTGGAAGAACGTGGGCAGGAAAGGAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000374383.1
ENST00000684092.1
CDS CAA 90 bp AGGCAAGGCAGAAGGGCAGCGATGGTTCTCTGGCCAGCTGCTCCTTaGGCAGGGTCACACATTTTCACACAGACCTTGCTCAGAGTTTTC +
Preference number: 6 (lower is better)
Translates to: RQGRRAAMVLWPAAP*AGSHIFTQTLLRVF
Trigger: GAAAACTCTGAGCAAGGTCTGTGTGAAAATGTGTGACCCTGCCAAAGGAGCAGCTGGCCAGAGAACCATCGCTGCCCTTCTGCCTTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000684092.1
CDS GCA 72 bp CAGATCCCTCACTGGGGATTGGAAGTGGACCATTTCTaGCAATTTCACCCAGGGCTGTGCAGGCAGCAATTG +
Preference number: 6 (lower is better)
Translates to: QIPHWGLEVDHF*QFHPGLCRQQL
Trigger: CAATTGCTGCCTGCACAGCCCTGGGTGAAATTGGCAGAAATGGTCCACTTCCAATCCCCAGTGAGGGATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000602447.5
ENST00000684092.1
CDS CAA 72 bp GGCTCCAGCAGGTGGAGTATATTCCTCTTCAGTCATTaGCCAGGCATCTCGGGCAGCCACAGAACTAGTTCC +
Preference number: 6 (lower is better)
Translates to: GSSRWSIFLFSH*PGISGSHRTSS
Trigger: GGAACTAGTTCTGTGGCTGCCCGAGATGCCTGGCAAATGACTGAAGAGGAATATACTCCACCTGCTGGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000684092.1
CDS CAA 72 bp CTTCCTGACAAGGGAAAGGAGCCAGATGCAGGCTGCTaGCCTCACGTGTGGGTTGGGGCTGATGATATGTTT +
Preference number: 6 (lower is better)
Translates to: LPDKGKEPDAGC*PHVWVGADDMF
Trigger: AAACATATCATCAGCCCCAACCCACACGTGAGGCAAGCAGCCTGCATCTGGCTCCTTTCCCTTGTCAGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000684092.1
CDS CAA 90 bp TCATTCCCGGAGGAGGCTGTGGGATTCCAGAACCTCCGCCACTGTTaGAAGAAGAACCCTGTGCTGAAGATGAATTTTGGCGACTCTGGG +
Preference number: 6 (lower is better)
Translates to: SFPEEAVGFQNLRHC*KKNPVLKMNFGDSG
Trigger: CCCAGAGTCGCCAAAATTCATCTTCAGCACAGGGTTCTTCTTCAAACAGTGGCGGAGGTTCTGGAATCCCACAGCCTCCTCCGGGAATGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000602447.5
ENST00000684092.1
CDS GCA 72 bp GCTCCAGCAGGTGGAGTATATTCCTCTTCAGTCATTTaGCAGGCATCTCGGGCAGCCACAGAACTAGTTCCT +
Preference number: 6 (lower is better)
Translates to: APAGGVYSSSVI*QASRAATELVP
Trigger: AGGAACTAGTTCTGTGGCTGCCCGAGATGCCTGGCAAATGACTGAAGAGGAATATACTCCACCTGCTGGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000684092.1
CDS CCA 72 bp GCCCGCTTGACATTAAAGTCCGTATGTAGCGCCCAATaGCTGGGGCATGATCCTGCATATCAGCCAAACTCT +
Preference number: 6 (lower is better)
Translates to: ARLTLKSVCSAQ*LGHDPAYQPNS
Trigger: AGAGTTTGGCTGATATGCAGGATCATGCCCCAGCCATTGGGCGCTACATACGGACTTTAATGTCAAGCGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000602447.5
ENST00000684092.1
CDS CAA 72 bp CACCAATGGTACGTTCATCCACTCGTACATATGCAATaGTATAAAGAATCTGTCGCCGCCCGCCCCGCGTGC +
Preference number: 6 (lower is better)
Translates to: HQWYVHPLVHMQ*YKESVAARPAC
Trigger: GCACGCGGGGCGGGCGGCGACAGATTCTTTATACAATTGCATATGTACGAGTGGATGAACGTACCATTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602978.1
CDS GCA 72 bp GTACGAAGCCACAAGTGCCTCCATGAGAGTTCGCTGTaGCCCTTCCAAAGTACTATACGCTCCAACCATCAT +
Preference number: 6 (lower is better)
Translates to: VRSHKCLHESSL*PFQSTIRSNHH
Trigger: ATGATGGTTGGAGCGTATAGTACTTTGGAAGGGGCACAGCGAACTCTCATGGAGGCACTTGTGGCTTCGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000602447.5
ENST00000684092.1
CDS GCA 72 bp GGGATCACCAATGGTACGTTCATCCACTCGTACATATaGAATTGTATAAAGAATCTGTCGCCGCCCGCCCCG +
Preference number: 6 (lower is better)
Translates to: GITNGTFIHSYI*NCIKNLSPPAP
Trigger: CGGGGCGGGCGGCGACAGATTCTTTATACAATTGCATATGTACGAGTGGATGAACGTACCATTGGTGATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602978.1
CDS CCA 72 bp CTTTTCAATTCCAGGTCTGCTGCCGTTGCCACACTGTaGCGTGTATCACTAGAGGCAATCACCAAGTGGAGA +
Preference number: 6 (lower is better)
Translates to: LFNSRSAAVATL*RVSLEAITKWR
Trigger: TCTCCACTTGGTGATTGCCTCTAGTGATACACGCCACAGTGTGGCAACGGCAGCAGACCTGGAATTGAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000602447.5
ENST00000684092.1
CDS CCA 72 bp GTACAGAACGATCTCTCCAAAGGCTGCTGGGTTAAATaGAAGGACAGTGGTCCCGGTCATGTACTTGACTGG +
Preference number: 6 (lower is better)
Translates to: VQNDLSKGCWVK*KDSGPGHVLDW
Trigger: CCAGTCAAGTACATGACCGGGACCACTGTCCTTCCATTTAACCCAGCAGCCTTTGGAGAGATCGTTCTGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000602447.5
ENST00000684092.1
CDS CAA 90 bp ATTCACTTTGGCTCCAGCAGGTGGAGTATATTCCTCTTCAGTCATTaGCCAGGCATCTCGGGCAGCCACAGAACTAGTTCCTATTGCAGC +
Preference number: 6 (lower is better)
Translates to: IHFGSSRWSIFLFSH*PGISGSHRTSSYCS
Trigger: GCTGCAATAGGAACTAGTTCTGTGGCTGCCCGAGATGCCTGGCAAATGACTGAAGAGGAATATACTCCACCTGCTGGAGCCAAAGTGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000684092.1
CDS GCA 72 bp AGGTGTCCATGGGTTATCACCAATAACTCGTTTGGCTaGATAAAAGCTCATTCCCGGAGGAGGCTGTGGGAT +
Preference number: 6 (lower is better)
Translates to: RCPWVITNNSFG*IKAHSRRRLWD
Trigger: ATCCCACAGCCTCCTCCGGGAATGAGCTTTTATGCAGCCAAACGAGTTATTGGTGATAACCCATGGACACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000602447.5
ENST00000684092.1
CDS CCA 72 bp ATGCAATTTGGTAAAGCCAGATCCCTCACTGGGGATTaGAAGTGGACCATTTCTGCCAATTTCACCCAGGGC +
Preference number: 6 (lower is better)
Translates to: MQFGKARSLTGD*KWTISANFTQG
Trigger: GCCCTGGGTGAAATTGGCAGAAATGGTCCACTTCCAATCCCCAGTGAGGGATCTGGCTTTACCAAATTGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000602447.5
ENST00000684092.1
CDS CAA 90 bp TCAGCAGCTTGTCTAGAGCGGAGGAGATGGGGGACAATCTTTAACTaGACTCTTGTACTGACAGGGTCCCTTTTCAACTCTGGCTTCAGA +
Preference number: 6 (lower is better)
Translates to: SAACLERRRWGTIFN*TLVLTGSLFNSGFR
Trigger: TCTGAAGCCAGAGTTGAAAAGGGACCCTGTCAGTACAAGAGTCAAGTTAAAGATTGTCCCCCATCTCCTCCGCTCTAGACAAGCTGCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000602447.5
ENST00000684092.1
CDS CAA 90 bp GGAATGAGTTTTGGTGCATGCGGTTTCAACATGGCTCCTGCACTTTaGCTGATCTTCACAAGGGTGTTAATGCTGAGGGCTCGAACTTCC +
Preference number: 6 (lower is better)
Translates to: GMSFGACGFNMAPAL*LIFTRVLMLRARTS
Trigger: GGAAGTTCGAGCCCTCAGCATTAACACCCTTGTGAAGATCAGCAAAAGTGCAGGAGCCATGTTGAAACCGCATGCACCAAAACTCATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000684092.1
CDS TCA 72 bp GCTCCAATACACTTAAGGACTCTAGCAGAGCTGGAATaGGTTTTGGTGCATGCGGTTTCAACATGGCTCCTG +
Preference number: 6 (lower is better)
Translates to: APIHLRTLAELE*VLVHAVSTWLL
Trigger: CAGGAGCCATGTTGAAACCGCATGCACCAAAACTCATTCCAGCTCTGCTAGAGTCCTTAAGTGTATTGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000684092.1
CDS TCA 72 bp TTGATTGCAGGACTCCTAGCTGCACTTTCCACGTGCTaGGTTTTAGCCGTTCACACATCAGTTTGCACAGCT +
Preference number: 6 (lower is better)
Translates to: LIAGLLAALSTC*VLAVHTSVCTA
Trigger: AGCTGTGCAAACTGATGTGTGAACGGCTAAAACTCAGCACGTGGAAAGTGCAGCTAGGAGTCCTGCAATCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000465499.1
ENST00000684092.1
CDS GCA 72 bp AAGGACTCTAGCAGAGCTGGAATGAGTTTTGGTGCATaGGGTTTCAACATGGCTCCTGCACTTTTGCTGATC +
Preference number: 6 (lower is better)
Translates to: KDSSRAGMSFGA*GFNMAPALLLI
Trigger: GATCAGCAAAAGTGCAGGAGCCATGTTGAAACCGCATGCACCAAAACTCATTCCAGCTCTGCTAGAGTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000684092.1
CDS GCA 72 bp GGTTCTTCTTTCTCCATATACCACCCATTGAGCTTCTaGAGGAGTTTTTCAGTGCTGCTATCCCGTGAGGTC +
Preference number: 6 (lower is better)
Translates to: GSSFSIYHPLSF*RSFSVLLSREV
Trigger: GACCTCACGGGATAGCAGCACTGAAAAACTCCTGCAGAAGCTCAATGGGTGGTATATGGAGAAAGAAGAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000684092.1
CDS CCA 72 bp CTTGACTCTTGTACTGACAGGGTCCCTTTTCAACTCTaGCTTCAGAACTGCACCCTCTTTTGTCTTCAGTGG +
Preference number: 6 (lower is better)
Translates to: LDSCTDRVPFQL*LQNCTLFCLQW
Trigger: CCACTGAAGACAAAAGAGGGTGCAGTTCTGAAGCCAGAGTTGAAAAGGGACCCTGTCAGTACAAGAGTCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000602447.5
ENST00000684092.1
CDS CAA 72 bp AGGAGCCAGATGCAGGCTGCTTGCCTCACGTGTGGGTaGGGGCTGATGATATGTTTATTTAAAATCACATCC +
Preference number: 6 (lower is better)
Translates to: RSQMQAACLTCG*GLMICLFKITS
Trigger: GGATGTGATTTTAAATAAACATATCATCAGCCCCAACCCACACGTGAGGCAAGCAGCCTGCATCTGGCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000684092.1
CDS CAA 72 bp TTTGGTGCATGCGGTTTCAACATGGCTCCTGCACTTTaGCTGATCTTCACAAGGGTGTTAATGCTGAGGGCT +
Preference number: 6 (lower is better)
Translates to: FGACGFNMAPAL*LIFTRVLMLRA
Trigger: AGCCCTCAGCATTAACACCCTTGTGAAGATCAGCAAAAGTGCAGGAGCCATGTTGAAACCGCATGCACCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000684092.1
CDS CAA 72 bp AGGCACATGTTGATTGTTTCCATCATTGGAGAAGATTaGGCAGCACTAAGCCGAGCACTATCCATCGCAGCC +
Preference number: 6 (lower is better)
Translates to: RHMLIVSIIGED*AALSRALSIAA
Trigger: GGCTGCGATGGATAGTGCTCGGCTTAGTGCTGCCAAATCTTCTCCAATGATGGAAACAATCAACATGTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000684092.1
CDS CAA 90 bp ACAAGGGAAAGGAGCCAGATGCAGGCTGCTTGCCTCACGTGTGGGTaGGGGCTGATGATATGTTTATTTAAAATCACATCCAACACCCAT +
Preference number: 6 (lower is better)
Translates to: TRERSQMQAACLTCG*GLMICLFKITSNTH
Trigger: ATGGGTGTTGGATGTGATTTTAAATAAACATATCATCAGCCCCAACCCACACGTGAGGCAAGCAGCCTGCATCTGGCTCCTTTCCCTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000684092.1
CDS CAA 90 bp AGGTATTGCAGGCACATGTTGATTGTTTCCATCATTGGAGAAGATTaGGCAGCACTAAGCCGAGCACTATCCATCGCAGCCTTTTCTTGC +
Preference number: 6 (lower is better)
Translates to: RYCRHMLIVSIIGED*AALSRALSIAAFSC
Trigger: GCAAGAAAAGGCTGCGATGGATAGTGCTCGGCTTAGTGCTGCCAAATCTTCTCCAATGATGGAAACAATCAACATGTGCCTGCAATACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000684092.1
CDS CCA 72 bp GAACAGCTTGAAGAATTTCATTTGTGCTGGGTTGATTaGGCACAGACTTTTCCAGCTCTGCACTGCAAGCTG +
Preference number: 6 (lower is better)
Translates to: EQLEEFHLCWVD*AQTFPALHCKL
Trigger: CAGCTTGCAGTGCAGAGCTGGAAAAGTCTGTGCCCAATCAACCCAGCACAAATGAAATTCTTCAAGCTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000374383.1
ENST00000684092.1
CDS CAA 72 bp TGTCTAGAGCGGAGGAGATGGGGGACAATCTTTAACTaGACTCTTGTACTGACAGGGTCCCTTTTCAACTCT +
Preference number: 6 (lower is better)
Translates to: CLERRRWGTIFN*TLVLTGSLFNS
Trigger: AGAGTTGAAAAGGGACCCTGTCAGTACAAGAGTCAAGTTAAAGATTGTCCCCCATCTCCTCCGCTCTAGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000602447.5
ENST00000684092.1
CDS CAA 72 bp TTCTATCTGCTTGGCCTCCACAGAATCCATCAGACCTaGCAAGAGGAGTTTCTGGTGAGGAAAATCTCCATC +
Preference number: 6 (lower is better)
Translates to: FYLLGLHRIHQT*QEEFLVRKISI
Trigger: GATGGAGATTTTCCTCACCAGAAACTCCTCTTGCAAGGTCTGATGGATTCTGTGGAGGCCAAGCAGATAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000684092.1
CDS GCA 72 bp TCAGGCTCTTCCTTGCAAAGGGCTTCAAAAAGCTGCTaGACAAGCGCTATATCCTTAGTGAATAAATGTGGC +
Preference number: 6 (lower is better)
Translates to: SGSSLQRASKSC*TSAISLVNKCG
Trigger: GCCACATTTATTCACTAAGGATATAGCGCTTGTGCAGCAGCTTTTTGAAGCCCTTTGCAAGGAAGAGCCTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000602447.5
ENST00000684092.1
CDS GCA 72 bp CCAACGCATTCCAAATACTTGTCATGGCCTGTCGAATaGCAAGGTTGGGATCAAACTGGTAACGATAAAGTC +
Preference number: 6 (lower is better)
Translates to: PTHSKYLSWPVE*QGWDQTGNDKV
Trigger: GACTTTATCGTTACCAGTTTGATCCCAACCTTGGCATTCGACAGGCCATGACAAGTATTTGGAATGCGTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000684092.1
CDS GCA 72 bp GGGATCACCAATGGTACGTTCATCCACTCGTACATATaGAATTGTATAAAGAATCTGAGTCGGAGCCGGTCT +
Preference number: 6 (lower is better)
Translates to: GITNGTFIHSYI*NCIKNLSRSRS
Trigger: AGACCGGCTCCGACTCAGATTCTTTATACAATTGCATATGTACGAGTGGATGAACGTACCATTGGTGATCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684092.1
CDS CAA 72 bp CACCAATGGTACGTTCATCCACTCGTACATATGCAATaGTATAAAGAATCTGAGTCGGAGCCGGTCTCCATG +
Preference number: 6 (lower is better)
Translates to: HQWYVHPLVHMQ*YKESESEPVSM
Trigger: CATGGAGACCGGCTCCGACTCAGATTCTTTATACAATTGCATATGTACGAGTGGATGAACGTACCATTGGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684092.1
CDS CAA 90 bp ATGAGAGGTATGACAATGTTAGAGAACTCCTGGAATCTGTCCTCTTaGGTGGCCTTCAAGATATCAGCTGCACAGCTGATTGCTACAATC +
Preference number: 6 (lower is better)
Translates to: MRGMTMLENSWNLSS*VAFKISAAQLIATI
Trigger: GATTGTAGCAATCAGCTGTGCAGCTGATATCTTGAAGGCCACCAAAGAGGACAGATTCCAGGAGTTCTCTAACATTGTCATACCTCTCAT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000374383.1
ENST00000465499.1
ENST00000684092.1
CDS TCA 72 bp TTTGTGACAAAGGAAACTGCAGCAGGGTCCTGGTACTaGACCAACAGTGTCTCTACTGGAAGTTGTATTTTG +
Preference number: 6 (lower is better)
Translates to: FVTKETAAGSWY*TNSVSTGSCIL
Trigger: CAAAATACAACTTCCAGTAGAGACACTGTTGGTTCAGTACCAGGACCCTGCTGCAGTTTCCTTTGTCACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000602447.5
ENST00000602978.1
ENST00000684092.1
CDS TCA 72 bp ACACGTAACCATAAGGCATCAGAAGGACATCTAGCATaGAGTCCAAAAGCAGCTGCACAGTCTTTGGTTTCT +
Preference number: 6 (lower is better)
Translates to: TRNHKASEGHLA*SPKAAAQSLVS
Trigger: AGAAACCAAAGACTGTGCAGCTGCTTTTGGACTTCATGCTAGATGTCCTTCTGATGCCTTATGGTTACGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000602447.5
ENST00000684092.1
CDS TCA 72 bp ATGGCAATTGCACCCTGGGCTTTCATTTTCCAGGACTaGGACTGCAAAGCCTTCTGGGTAATAGTAATTAAC +
Preference number: 6 (lower is better)
Translates to: MAIAPWAFIFQD*DCKAFWVIVIN
Trigger: GTTAATTACTATTACCCAGAAGGCTTTGCAGTCTCAGTCCTGGAAAATGAAAGCCCAGGGTGCAATTGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000684092.1
CDS GCA 72 bp GTCTCAGGCTCTTCCTTGCAAAGGGCTTCAAAAAGCTaGTGCACAAGCGCTATATCCTTAGTGAATAAATGT +
Preference number: 6 (lower is better)
Translates to: VSGSSLQRASKS*CTSAISLVNKC
Trigger: ACATTTATTCACTAAGGATATAGCGCTTGTGCAGCAGCTTTTTGAAGCCCTTTGCAAGGAAGAGCCTGAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000602447.5
ENST00000684092.1
CDS GCA 72 bp AATGAGTTTTGGTGCATGCGGTTTCAACATGGCTCCTaGACTTTTGCTGATCTTCACAAGGGTGTTAATGCT +
Preference number: 6 (lower is better)
Translates to: NEFWCMRFQHGS*TFADLHKGVNA
Trigger: AGCATTAACACCCTTGTGAAGATCAGCAAAAGTGCAGGAGCCATGTTGAAACCGCATGCACCAAAACTCATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000684092.1
CDS GCA 72 bp GACTGCAAAGCCTTCTGGGTAATAGTAATTAACTCCTaGAGGTATAATCGAATGCCACCAAAGGATCCAGGT +
Preference number: 6 (lower is better)
Translates to: DCKAFWVIVINS*RYNRMPPKDPG
Trigger: ACCTGGATCCTTTGGTGGCATTCGATTATACCTGCAGGAGTTAATTACTATTACCCAGAAGGCTTTGCAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000684092.1
CDS CCA 72 bp TCCAAATACTTGTCATGGCCTGTCGAATGCCAAGGTTaGGATCAAACTGGTAACGATAAAGTCGAGGAACTA +
Preference number: 6 (lower is better)
Translates to: SKYLSWPVECQG*DQTGNDKVEEL
Trigger: TAGTTCCTCGACTTTATCGTTACCAGTTTGATCCCAACCTTGGCATTCGACAGGCCATGACAAGTATTTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000684092.1
CDS CCA 72 bp AAGGTATTGCAGGCACATGTTGATTGTTTCCATCATTaGAGAAGATTTGGCAGCACTAAGCCGAGCACTATC +
Preference number: 6 (lower is better)
Translates to: KVLQAHVDCFHH*RRFGSTKPSTI
Trigger: GATAGTGCTCGGCTTAGTGCTGCCAAATCTTCTCCAATGATGGAAACAATCAACATGTGCCTGCAATACCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000684092.1
CDS TCA 72 bp GTACTATACGCTCCAACCATCATAGATAAAGCTTCTTaGATAGCAAGTCGAGTCTCAGGCTCTTCCTTGCAA +
Preference number: 6 (lower is better)
Translates to: VLYAPTIIDKAS*IASRVSGSSLQ
Trigger: TTGCAAGGAAGAGCCTGAGACTCGACTTGCTATTCAAGAAGCTTTATCTATGATGGTTGGAGCGTATAGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000602447.5
ENST00000684092.1
CDS GCA 72 bp AATCGAATGCCACCAAAGGATCCAGGTACGTTTTCCTaGCACACTTCGGTCCATAAATTACATTCTTCTTTT +
Preference number: 6 (lower is better)
Translates to: NRMPPKDPGTFS*HTSVHKLHSSF
Trigger: AAAAGAAGAATGTAATTTATGGACCGAAGTGTGGCAGGAAAACGTACCTGGATCCTTTGGTGGCATTCGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000684092.1
CDS GCA 72 bp GAATCTGTCCTCTTTGGTGGCCTTCAAGATATCAGCTaGACAGCTGATTGCTACAATCTTGTATTTGACATT +
Preference number: 6 (lower is better)
Translates to: ESVLFGGLQDIS*TADCYNLVFDI
Trigger: AATGTCAAATACAAGATTGTAGCAATCAGCTGTGCAGCTGATATCTTGAAGGCCACCAAAGAGGACAGATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000374383.1
ENST00000465499.1
ENST00000684092.1
CDS CCA 72 bp TCCCAATTTGCACTGTTCCAATTGTTCAGGTGTCCATaGGTTATCACCAATAACTCGTTTGGCTGCATAAAA +
Preference number: 6 (lower is better)
Translates to: SQFALFQLFRCP*VITNNSFGCIK
Trigger: TTTTATGCAGCCAAACGAGTTATTGGTGATAACCCATGGACACCTGAACAATTGGAACAGTGCAAATTGGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000602447.5
ENST00000684092.1
CDS CAA 72 bp AGTAGTTTAGGGTCCTCTTTGTATTCATTGATTAGCTaGGTGAGGCCATTCAAAAGCATTGGACCTAATGGC +
Preference number: 6 (lower is better)
Translates to: SSLGSSLYSLIS*VRPFKSIGPNG
Trigger: GCCATTAGGTCCAATGCTTTTGAATGGCCTCACCAAGCTAATCAATGAATACAAAGAGGACCCTAAACTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000602447.5
ENST00000684092.1
CDS CAA 90 bp TTACTGGAAGGTATTCTACTTAGTAAGCTTTCTACAAGATGCAATTaGGTAAAGCCAGATCCCTCACTGGGGATTGGAAGTGGACCATTT +
Preference number: 6 (lower is better)
Translates to: LLEGILLSKLSTRCN*VKPDPSLGIGSGPF
Trigger: AAATGGTCCACTTCCAATCCCCAGTGAGGGATCTGGCTTTACCAAATTGCATCTTGTAGAAAGCTTACTAAGTAGAATACCTTCCAGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000602447.5
ENST00000684092.1
CDS GCA 72 bp TCTTCTTTTTCGGATTTCTCCTCATCAGCAATTTCATaGATGCCTAAAAATGCCAGAGGCAGGACTTCTTTT +
Preference number: 6 (lower is better)
Translates to: SSFSDFSSSAIS*MPKNARGRTSF
Trigger: AAAAGAAGTCCTGCCTCTGGCATTTTTAGGCATGCATGAAATTGCTGATGAGGAGAAATCCGAAAAAGAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000684092.1
CDS CAA 72 bp GTTCTATCATTGATTTCAACTCATTCCCCGACACTGTaGATACCACTACAGAATAAAACAACGCTGCCAGTT +
Preference number: 6 (lower is better)
Translates to: VLSLISTHSPTL*IPLQNKTTLPV
Trigger: AACTGGCAGCGTTGTTTTATTCTGTAGTGGTATCAACAGTGTCGGGGAATGAGTTGAAATCAATGATAGAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000602447.5
ENST00000684092.1
CDS CAA 72 bp CTCCATCCCCAACTGGAAAATATCCCAGTGTTTGGATaGCTCGTTCTTTCATCTTATTTGTTTCTTTACTGG +
Preference number: 6 (lower is better)
Translates to: LHPQLENIPVFG*LVLSSYLFLYW
Trigger: CCAGTAAAGAAACAAATAAGATGAAAGAACGAGCAATCCAAACACTGGGATATTTTCCAGTTGGGGATGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000602447.5
ENST00000684092.1
CDS TCA 72 bp TTTCTTTCAAATATTTATCCACCATGGATTTGTCAGTaGCCAACGCATTCCAAATACTTGTCATGGCCTGTC +
Preference number: 6 (lower is better)
Translates to: FLSNIYPPWICQ*PTHSKYLSWPV
Trigger: GACAGGCCATGACAAGTATTTGGAATGCGTTGGTCACTGACAAATCCATGGTGGATAAATATTTGAAAGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000684092.1
CDS CCA 72 bp TTGGCTAAATTCATAAATTTATACACCAGATCTGGCTaGCTAAGATCACTTGCCAGAGAACAAAGTTCCTTG +
Preference number: 6 (lower is better)
Translates to: LAKFINLYTRSG*LRSLAREQSSL
Trigger: CAAGGAACTTTGTTCTCTGGCAAGTGATCTTAGCCAGCCAGATCTGGTGTATAAATTTATGAATTTAGCCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000684092.1
CDS CCA 72 bp TTATCCAATCTTGACAAAAATCCTCGGGATCACCAATaGTACGTTCATCCACTCGTACATATGCAATTGTAT +
Preference number: 6 (lower is better)
Translates to: LSNLDKNPRDHQ*YVHPLVHMQLY
Trigger: ATACAATTGCATATGTACGAGTGGATGAACGTACCATTGGTGATCCCGAGGATTTTTGTCAAGATTGGATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000602978.1
ENST00000684092.1
CDS CAA 90 bp GATGCACAAATTGCAGGGATAATGTTCTTAACTTTGAATTTGTATTaGTACCAAAAAGTCCATCATACACCACCTGAATGTTGGCTGGGA +
Preference number: 6 (lower is better)
Translates to: DAQIAGIMFLTLNLY*YQKVHHTPPECWLG
Trigger: TCCCAGCCAACATTCAGGTGGTGTATGATGGACTTTTTGGTACAAATACAAATTCAAAGTTAAGAACATTATCCCTGCAATTTGTGCATC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000602447.5
ENST00000684092.1
CDS CAA 90 bp AATCTTGTATTTGACATTCTCTTTGCTACATTCCTTCAGAACAGCTaGAAGAATTTCATTTGTGCTGGGTTGATTGGGCACAGACTTTTC +
Preference number: 6 (lower is better)
Translates to: NLVFDILFATFLQNS*KNFICAGLIGHRLF
Trigger: GAAAAGTCTGTGCCCAATCAACCCAGCACAAATGAAATTCTTCAAGCTGTTCTGAAGGAATGTAGCAAAGAGAATGTCAAATACAAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000374383.1
ENST00000684092.1
CDS CAA 72 bp TTCAAGATATCAGCTGCACAGCTGATTGCTACAATCTaGTATTTGACATTCTCTTTGCTACATTCCTTCAGA +
Preference number: 6 (lower is better)
Translates to: FKISAAQLIATI*YLTFSLLHSFR
Trigger: TCTGAAGGAATGTAGCAAAGAGAATGTCAAATACAAGATTGTAGCAATCAGCTGTGCAGCTGATATCTTGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000259335.8
ENST00000338205.9
ENST00000374383.1
ENST00000465499.1
ENST00000684092.1