Pregenerated sensors for ECI2-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000234817Ensembl transcript IDs: ENST00000427049.2
Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
---|---|---|
CDS TCA 90 bp | AAGAGCGTGCCAGCCCCTCGCCCCTCTGCATTCATCAGCATTGGTTaGGTACATGCTGTGACTGACCGGTGTTGGTACAATGGGCACAGA | + |
Preference number: 5 (lower is better) Translates to: KSVPAPRPSAFISIG*VHAVTDRCWYNGHR Trigger: TCTGTGCCCATTGTACCAACACCGGTCAGTCACAGCATGTACTCAACCAATGCTGATGAATGCAGAGGGGCGAGGGGCTGGCACGCTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000427049.2 |
||
CDS GCA 90 bp | TTCTCAGTTTCTGAGCTGGTTCTGGCTTTCTGCAGCTCAACCTGGTaGTCACAGGAGAGCTTGAGAACTCTAGAGAAGCAGGTGATTGGC | + |
Preference number: 5 (lower is better) Translates to: FSVSELVLAFCSSTW*SQESLRTLEKQVIG Trigger: GCCAATCACCTGCTTCTCTAGAGTTCTCAAGCTCTCCTGTGAGCACCAGGTTGAGCTGCAGAAAGCCAGAACCAGCTCAGAAACTGAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427049.2 |
||
CDS TCA 90 bp | AATTTGAAAGATTGGCAGAGCAAGACTGTACCAGAAAGTTCCCATTaGACCCTGGCCATCGACGCAGCCCCTATAAGGGGTCAAGAGCGT | + |
Preference number: 5 (lower is better) Translates to: NLKDWQSKTVPESSH*TLAIDAAPIRGQER Trigger: ACGCTCTTGACCCCTTATAGGGGCTGCGTCGATGGCCAGGGTTCAATGGGAACTTTCTGGTACAGTCTTGCTCTGCCAATCTTTCAAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000427049.2 |
||
CDS TCA 90 bp | TGTAGAGATGTTTCCTGGGCATCTTCATGTCCATTTCTCAGTTTCTaGGCTGGTTCTGGCTTTCTGCAGCTCAACCTGGTGCTCACAGGA | + |
Preference number: 5 (lower is better) Translates to: CRDVSWASSCPFLSF*AGSGFLQLNLVLTG Trigger: TCCTGTGAGCACCAGGTTGAGCTGCAGAAAGCCAGAACCAGCTCAGAAACTGAGAAATGGACATGAAGATGCCCAGGAAACATCTCTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427049.2 |
||
CDS CCA 90 bp | CATTTCTCAGTTTCTGAGCTGGTTCTGGCTTTCTGCAGCTCAACCTaGTGCTCACAGGAGAGCTTGAGAACTCTAGAGAAGCAGGTGATT | + |
Preference number: 5 (lower is better) Translates to: HFSVSELVLAFCSST*CSQESLRTLEKQVI Trigger: AATCACCTGCTTCTCTAGAGTTCTCAAGCTCTCCTGTGAGCACCAGGTTGAGCTGCAGAAAGCCAGAACCAGCTCAGAAACTGAGAAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427049.2 |
||
CDS CCA 90 bp | TTTCCCAGGAGGCTGTGTAGTTGTATTCACATTGTCGTCACTAGGTaGCAGCAGAGGGACTTCTGTGACTTTCAACCATTGGCTTTGGAA | + |
Preference number: 5 (lower is better) Translates to: FPRRLCSCIHIVVTR*QQRDFCDFQPLALE Trigger: TTCCAAAGCCAATGGTTGAAAGTCACAGAAGTCCCTCTGCTGCCACCTAGTGACGACAATGTGAATACAACTACACAGCCTCCTGGGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427049.2 |
||
CDS TCA 90 bp | CATATGGAAACAGCAGAATGTGACTCTGTTCTCTGTGTCTGGAAATaGATGGATCAACCCCCAGTTAGGGATGCTGTAGAGATGTTTCCT | + |
Preference number: 5 (lower is better) Translates to: HMETAECDSVLCVWK*MDQPPVRDAVEMFP Trigger: AGGAAACATCTCTACAGCATCCCTAACTGGGGGTTGATCCATTCATTTCCAGACACAGAGAACAGAGTCACATTCTGCTGTTTCCATATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000427049.2 |
||
CDS GCA 90 bp | AGTCTCCAATGTGCCAGCCCACTTCCATCTTGCAGATTTTGGACTTaGCAAGCCTCCAAGATTTTATGGGTCAGTTACTTAAATCTGTCT | + |
Preference number: 5 (lower is better) Translates to: SLQCASPLPSCRFWT*QASKILWVSYLNLS Trigger: AGACAGATTTAAGTAACTGACCCATAAAATCTTGGAGGCTTGGCAAGTCCAAAATCTGCAAGATGGAAGTGGGCTGGCACATTGGAGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000427049.2 |
||
CDS CCA 90 bp | TCCTTGAGTCTCCAATGTGCCAGCCCACTTCCATCTTGCAGATTTTaGACTTGCCAAGCCTCCAAGATTTTATGGGTCAGTTACTTAAAT | + |
Preference number: 5 (lower is better) Translates to: SLSLQCASPLPSCRF*TCQASKILWVSYLN Trigger: ATTTAAGTAACTGACCCATAAAATCTTGGAGGCTTGGCAAGTCCAAAATCTGCAAGATGGAAGTGGGCTGGCACATTGGAGACTCAAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000427049.2 |
||
CDS GCA 90 bp | TCATTATCAGTATGTGGCCAACAGGGAAATTTGCTAGATCTCAGATaGACTTTGTCTCCATTGTGTGGCCTTTCCTTGGTGTTTTTGAAT | + |
Preference number: 5 (lower is better) Translates to: SLSVCGQQGNLLDLR*TLSPLCGLSLVFLN Trigger: ATTCAAAAACACCAAGGAAAGGCCACACAATGGAGACAAAGTGCATCTGAGATCTAGCAAATTTCCCTGTTGGCCACATACTGATAATGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000427049.2 |
||
CDS TCA 72 bp | CGCTCAGTGCTCCGGCAGCCACAGGGTTCGCAGAGCTaGGGTCCGCCCGAGAGAGCAGCCGCGCCTCCAGCT | + |
Preference number: 6 (lower is better) Translates to: RSVLRQPQGSQS*GPPERAAAPPA Trigger: AGCTGGAGGCGCGGCTGCTCTCTCGGGCGGACCTCAGCTCTGCGAACCCTGTGGCTGCCGGAGCACTGAGCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427049.2 |
||
CDS TCA 72 bp | AGTGCTGGGCAGGAAACCTCACGCTCAGGCCTTATGTaGGCCTTTCTGCCCCTAATGCCCTCCTCAACCCGT | + |
Preference number: 6 (lower is better) Translates to: SAGQETSRSGLM*AFLPLMPSSTR Trigger: ACGGGTTGAGGAGGGCATTAGGGGCAGAAAGGCTCACATAAGGCCTGAGCGTGAGGTTTCCTGCCCAGCACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000427049.2 |
||
CDS CCA 72 bp | GTGAGAAGAAGGTGGGCTGCAATGGCACAGCAGTGCTaGGCAGGAAACCTCACGCTCAGGCCTTATGTGAGC | + |
Preference number: 6 (lower is better) Translates to: VRRRWAAMAQQC*AGNLTLRPYVS Trigger: GCTCACATAAGGCCTGAGCGTGAGGTTTCCTGCCCAGCACTGCTGTGCCATTGCAGCCCACCTTCTTCTCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427049.2 |
||
CDS TCA 72 bp | CCAGCCCCTCGCCCCTCTGCATTCATCAGCATTGGTTaGGTACATGCTGTGACTGACCGGTGTTGGTACAAT | + |
Preference number: 6 (lower is better) Translates to: PAPRPSAFISIG*VHAVTDRCWYN Trigger: ATTGTACCAACACCGGTCAGTCACAGCATGTACTCAACCAATGCTGATGAATGCAGAGGGGCGAGGGGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000427049.2 |
||
CDS TCA 72 bp | GATTGGCAGAGCAAGACTGTACCAGAAAGTTCCCATTaGACCCTGGCCATCGACGCAGCCCCTATAAGGGGT | + |
Preference number: 6 (lower is better) Translates to: DWQSKTVPESSH*TLAIDAAPIRG Trigger: ACCCCTTATAGGGGCTGCGTCGATGGCCAGGGTTCAATGGGAACTTTCTGGTACAGTCTTGCTCTGCCAATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000427049.2 |
||
CDS GCA 72 bp | AGGAATTCTGCCAGCAGCCGGCCTTTGAACTCAACGTaGAACTCTTCCTTGAGTCTCCAATGTGCCAGCCCA | + |
Preference number: 6 (lower is better) Translates to: RNSASSRPLNST*NSSLSLQCASP Trigger: TGGGCTGGCACATTGGAGACTCAAGGAAGAGTTGCACGTTGAGTTCAAAGGCCGGCTGCTGGCAGAATTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427049.2 |
||
CDS CAA 72 bp | AGATTGGCAGAGCAAGACTGTACCAGAAAGTTCCCATaGAACCCTGGCCATCGACGCAGCCCCTATAAGGGG | + |
Preference number: 6 (lower is better) Translates to: RLAEQDCTRKFP*NPGHRRSPYKG Trigger: CCCCTTATAGGGGCTGCGTCGATGGCCAGGGTTCAATGGGAACTTTCTGGTACAGTCTTGCTCTGCCAATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000427049.2 |
||
CDS GCA 72 bp | AACAGAGACCGACTTCACCTGAGCAGAAAGGAATTCTaGCAGCAGCCGGCCTTTGAACTCAACGTGCAACTC | + |
Preference number: 6 (lower is better) Translates to: NRDRLHLSRKEF*QQPAFELNVQL Trigger: GAGTTGCACGTTGAGTTCAAAGGCCGGCTGCTGGCAGAATTCCTTTCTGCTCAGGTGAAGTCGGTCTCTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427049.2 |
||
CDS CAA 90 bp | CTGGTTCTGGCTTTCTGCAGCTCAACCTGGTGCTCACAGGAGAGCTaGAGAACTCTAGAGAAGCAGGTGATTGGCCCTCTGAGTAAGGTT | + |
Preference number: 6 (lower is better) Translates to: LVLAFCSSTWCSQES*RTLEKQVIGPLSKV Trigger: AACCTTACTCAGAGGGCCAATCACCTGCTTCTCTAGAGTTCTCAAGCTCTCCTGTGAGCACCAGGTTGAGCTGCAGAAAGCCAGAACCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427049.2 |
||
CDS TCA 72 bp | GCCTTTCTGCCCCTAATGCCCTCCTCAACCCGTCTATaGGAATGTGAGGCTTCCAATTGTGCTGCACTTAAT | + |
Preference number: 6 (lower is better) Translates to: AFLPLMPSSTRL*ECEASNCAALN Trigger: ATTAAGTGCAGCACAATTGGAAGCCTCACATTCTCATAGACGGGTTGAGGAGGGCATTAGGGGCAGAAAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000427049.2 |
||
CDS CAA 72 bp | CCCCAGGAGTATTCACTTCTCTCTTCTCAGGCTGCCTaGGTGCAGACAAATATATTGTCCCCAACTTCCTGC | + |
Preference number: 6 (lower is better) Translates to: PQEYSLLSSQAA*VQTNILSPTSC Trigger: GCAGGAAGTTGGGGACAATATATTTGTCTGCACCAAGGCAGCCTGAGAAGAGAGAAGTGAATACTCCTGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000427049.2 |
||
CDS CAA 90 bp | GTGCAACTCTTCCTTGAGTCTCCAATGTGCCAGCCCACTTCCATCTaGCAGATTTTGGACTTGCCAAGCCTCCAAGATTTTATGGGTCAG | + |
Preference number: 6 (lower is better) Translates to: VQLFLESPMCQPTSI*QILDLPSLQDFMGQ Trigger: CTGACCCATAAAATCTTGGAGGCTTGGCAAGTCCAAAATCTGCAAGATGGAAGTGGGCTGGCACATTGGAGACTCAAGGAAGAGTTGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000427049.2 |
||
CDS GCA 72 bp | GAACTCAACGTGCAACTCTTCCTTGAGTCTCCAATGTaGCAGCCCACTTCCATCTTGCAGATTTTGGACTTG | + |
Preference number: 6 (lower is better) Translates to: ELNVQLFLESPM*QPTSILQILDL Trigger: CAAGTCCAAAATCTGCAAGATGGAAGTGGGCTGGCACATTGGAGACTCAAGGAAGAGTTGCACGTTGAGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000427049.2 |
||
CDS CAA 72 bp | TCTCCAATGTGCCAGCCCACTTCCATCTTGCAGATTTaGGACTTGCCAAGCCTCCAAGATTTTATGGGTCAG | + |
Preference number: 6 (lower is better) Translates to: SPMCQPTSILQI*DLPSLQDFMGQ Trigger: CTGACCCATAAAATCTTGGAGGCTTGGCAAGTCCAAAATCTGCAAGATGGAAGTGGGCTGGCACATTGGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000427049.2 |
||
CDS CAA 90 bp | TGGTTCAAAACTTCTTTCCCAGGAGGCTGTGTAGTTGTATTCACATaGTCGTCACTAGGTGGCAGCAGAGGGACTTCTGTGACTTTCAAC | + |
Preference number: 6 (lower is better) Translates to: WFKTSFPGGCVVVFT*SSLGGSRGTSVTFN Trigger: GTTGAAAGTCACAGAAGTCCCTCTGCTGCCACCTAGTGACGACAATGTGAATACAACTACACAGCCTCCTGGGAAAGAAGTTTTGAACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000427049.2 |
||
CDS TCA 72 bp | ACAGCAGAATGTGACTCTGTTCTCTGTGTCTGGAAATaGATGGATCAACCCCCAGTTAGGGATGCTGTAGAG | + |
Preference number: 6 (lower is better) Translates to: TAECDSVLCVWK*MDQPPVRDAVE Trigger: CTCTACAGCATCCCTAACTGGGGGTTGATCCATTCATTTCCAGACACAGAGAACAGAGTCACATTCTGCTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000427049.2 |
||
CDS GCA 72 bp | AGGAGTATTCACTTCTCTCTTCTCAGGCTGCCTTGGTaGAGACAAATATATTGTCCCCAACTTCCTGCCTTG | + |
Preference number: 6 (lower is better) Translates to: RSIHFSLLRLPW*RQIYCPQLPAL Trigger: CAAGGCAGGAAGTTGGGGACAATATATTTGTCTGCACCAAGGCAGCCTGAGAAGAGAGAAGTGAATACTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000427049.2 |
||
CDS GCA 72 bp | GTATGTGGCCAACAGGGAAATTTGCTAGATCTCAGATaGACTTTGTCTCCATTGTGTGGCCTTTCCTTGGTG | + |
Preference number: 6 (lower is better) Translates to: VCGQQGNLLDLR*TLSPLCGLSLV Trigger: CACCAAGGAAAGGCCACACAATGGAGACAAAGTGCATCTGAGATCTAGCAAATTTCCCTGTTGGCCACATAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427049.2 |
||
CDS GCA 72 bp | TCCTTGAGTCTCCAATGTGCCAGCCCACTTCCATCTTaGAGATTTTGGACTTGCCAAGCCTCCAAGATTTTA | + |
Preference number: 6 (lower is better) Translates to: SLSLQCASPLPS*RFWTCQASKIL Trigger: TAAAATCTTGGAGGCTTGGCAAGTCCAAAATCTGCAAGATGGAAGTGGGCTGGCACATTGGAGACTCAAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000427049.2 |
||
CDS CCA 72 bp | AGGCTGTGTAGTTGTATTCACATTGTCGTCACTAGGTaGCAGCAGAGGGACTTCTGTGACTTTCAACCATTG | + |
Preference number: 6 (lower is better) Translates to: RLCSCIHIVVTR*QQRDFCDFQPL Trigger: CAATGGTTGAAAGTCACAGAAGTCCCTCTGCTGCCACCTAGTGACGACAATGTGAATACAACTACACAGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427049.2 |
||
CDS CAA 72 bp | TTCCTTGAGTCTCCAATGTGCCAGCCCACTTCCATCTaGCAGATTTTGGACTTGCCAAGCCTCCAAGATTTT | + |
Preference number: 6 (lower is better) Translates to: FLESPMCQPTSI*QILDLPSLQDF Trigger: AAAATCTTGGAGGCTTGGCAAGTCCAAAATCTGCAAGATGGAAGTGGGCTGGCACATTGGAGACTCAAGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000427049.2 |
||
CDS GCA 72 bp | ATAACCCCAGGAGTATTCACTTCTCTCTTCTCAGGCTaGCTTGGTGCAGACAAATATATTGTCCCCAACTTC | + |
Preference number: 6 (lower is better) Translates to: ITPGVFTSLFSG*LGADKYIVPNF Trigger: GAAGTTGGGGACAATATATTTGTCTGCACCAAGGCAGCCTGAGAAGAGAGAAGTGAATACTCCTGGGGTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000427049.2 |
||
CDS GCA 72 bp | TGTGCCAGCCCACTTCCATCTTGCAGATTTTGGACTTaGCAAGCCTCCAAGATTTTATGGGTCAGTTACTTA | + |
Preference number: 6 (lower is better) Translates to: CASPLPSCRFWT*QASKILWVSYL Trigger: TAAGTAACTGACCCATAAAATCTTGGAGGCTTGGCAAGTCCAAAATCTGCAAGATGGAAGTGGGCTGGCACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000427049.2 |
||
CDS CAA 72 bp | GGCCAACAGGGAAATTTGCTAGATCTCAGATGCACTTaGTCTCCATTGTGTGGCCTTTCCTTGGTGTTTTTG | + |
Preference number: 6 (lower is better) Translates to: GQQGNLLDLRCT*SPLCGLSLVFL Trigger: CAAAAACACCAAGGAAAGGCCACACAATGGAGACAAAGTGCATCTGAGATCTAGCAAATTTCCCTGTTGGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000427049.2 |
||
CDS CAA 90 bp | TATTCACTTCTCTCTTCTCAGGCTGCCTTGGTGCAGACAAATATATaGTCCCCAACTTCCTGCCTTGTGCCCCAAGAAGTCTTACTAAAA | + |
Preference number: 6 (lower is better) Translates to: YSLLSSQAALVQTNI*SPTSCLVPQEVLLK Trigger: TTTTAGTAAGACTTCTTGGGGCACAAGGCAGGAAGTTGGGGACAATATATTTGTCTGCACCAAGGCAGCCTGAGAAGAGAGAAGTGAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000427049.2 |
||
CDS TCA 72 bp | TGCATTCATCAGCATTGGTTGAGTACATGCTGTGACTaGCCGGTGTTGGTACAATGGGCACAGAGATTAATA | + |
Preference number: 6 (lower is better) Translates to: CIHQHWLSTCCD*PVLVQWAQRLI Trigger: TATTAATCTCTGTGCCCATTGTACCAACACCGGTCAGTCACAGCATGTACTCAACCAATGCTGATGAATGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427049.2 |
||
CDS CCA 72 bp | TGCAGATTTTGGACTTGCCAAGCCTCCAAGATTTTATaGGTCAGTTACTTAAATCTGTCTGTCTGTCCCTCT | + |
Preference number: 6 (lower is better) Translates to: CRFWTCQASKIL*VSYLNLSVCPS Trigger: AGAGGGACAGACAGACAGATTTAAGTAACTGACCCATAAAATCTTGGAGGCTTGGCAAGTCCAAAATCTGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000427049.2 |
||
CDS CAA 90 bp | TCAGTATGTGGCCAACAGGGAAATTTGCTAGATCTCAGATGCACTTaGTCTCCATTGTGTGGCCTTTCCTTGGTGTTTTTGAATAGTAGA | + |
Preference number: 6 (lower is better) Translates to: SVCGQQGNLLDLRCT*SPLCGLSLVFLNSR Trigger: TCTACTATTCAAAAACACCAAGGAAAGGCCACACAATGGAGACAAAGTGCATCTGAGATCTAGCAAATTTCCCTGTTGGCCACATACTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000427049.2 |
||
CDS CCA 72 bp | GCGTTTTCTCTGGGCAGCAACTATGTTAAACCACCATaGTACCTATTAATGTCAAATAAGTACCCCACAGTA | + |
Preference number: 6 (lower is better) Translates to: AFSLGSNYVKPP*YLLMSNKYPTV Trigger: TACTGTGGGGTACTTATTTGACATTAATAGGTACCATGGTGGTTTAACATAGTTGCTGCCCAGAGAAAACGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000427049.2 |
||
CDS CAA 90 bp | GGCCAACAGGGAAATTTGCTAGATCTCAGATGCACTTTGTCTCCATaGTGTGGCCTTTCCTTGGTGTTTTTGAATAGTAGAGATAATCTA | + |
Preference number: 6 (lower is better) Translates to: GQQGNLLDLRCTLSP*CGLSLVFLNSRDNL Trigger: TAGATTATCTCTACTATTCAAAAACACCAAGGAAAGGCCACACAATGGAGACAAAGTGCATCTGAGATCTAGCAAATTTCCCTGTTGGCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000427049.2 |
||
CDS CAA 90 bp | ATTGATTTTAATACATCATTATCAGTATGTGGCCAACAGGGAAATTaGCTAGATCTCAGATGCACTTTGTCTCCATTGTGTGGCCTTTCC | + |
Preference number: 6 (lower is better) Translates to: IDFNTSLSVCGQQGN*LDLRCTLSPLCGLS Trigger: GGAAAGGCCACACAATGGAGACAAAGTGCATCTGAGATCTAGCAAATTTCCCTGTTGGCCACATACTGATAATGATGTATTAAAATCAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000427049.2 |
||
CDS CAA 72 bp | AATACATCATTATCAGTATGTGGCCAACAGGGAAATTaGCTAGATCTCAGATGCACTTTGTCTCCATTGTGT | + |
Preference number: 6 (lower is better) Translates to: NTSLSVCGQQGN*LDLRCTLSPLC Trigger: ACACAATGGAGACAAAGTGCATCTGAGATCTAGCAAATTTCCCTGTTGGCCACATACTGATAATGATGTATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000427049.2 |
||
CDS TCA 72 bp | AGTAGAGATAATCTAGTTTTAAAGCTGGTACTTTTGTaGATGTGTACTTTCATACTCCATGTCTCAGGTACC | + |
Preference number: 6 (lower is better) Translates to: SRDNLVLKLVLL*MCTFILHVSGT Trigger: GGTACCTGAGACATGGAGTATGAAAGTACACATTCACAAAAGTACCAGCTTTAAAACTAGATTATCTCTACT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000427049.2 |