RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ECI2-DT (Homo sapiens)

Ensembl gene IDs: ENSG00000234817

Ensembl transcript IDs: ENST00000427049.2

Found 43 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS TCA 90 bp AAGAGCGTGCCAGCCCCTCGCCCCTCTGCATTCATCAGCATTGGTTaGGTACATGCTGTGACTGACCGGTGTTGGTACAATGGGCACAGA +
Preference number: 5 (lower is better)
Translates to: KSVPAPRPSAFISIG*VHAVTDRCWYNGHR
Trigger: TCTGTGCCCATTGTACCAACACCGGTCAGTCACAGCATGTACTCAACCAATGCTGATGAATGCAGAGGGGCGAGGGGCTGGCACGCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427049.2
CDS GCA 90 bp TTCTCAGTTTCTGAGCTGGTTCTGGCTTTCTGCAGCTCAACCTGGTaGTCACAGGAGAGCTTGAGAACTCTAGAGAAGCAGGTGATTGGC +
Preference number: 5 (lower is better)
Translates to: FSVSELVLAFCSSTW*SQESLRTLEKQVIG
Trigger: GCCAATCACCTGCTTCTCTAGAGTTCTCAAGCTCTCCTGTGAGCACCAGGTTGAGCTGCAGAAAGCCAGAACCAGCTCAGAAACTGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427049.2
CDS TCA 90 bp AATTTGAAAGATTGGCAGAGCAAGACTGTACCAGAAAGTTCCCATTaGACCCTGGCCATCGACGCAGCCCCTATAAGGGGTCAAGAGCGT +
Preference number: 5 (lower is better)
Translates to: NLKDWQSKTVPESSH*TLAIDAAPIRGQER
Trigger: ACGCTCTTGACCCCTTATAGGGGCTGCGTCGATGGCCAGGGTTCAATGGGAACTTTCTGGTACAGTCTTGCTCTGCCAATCTTTCAAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427049.2
CDS TCA 90 bp TGTAGAGATGTTTCCTGGGCATCTTCATGTCCATTTCTCAGTTTCTaGGCTGGTTCTGGCTTTCTGCAGCTCAACCTGGTGCTCACAGGA +
Preference number: 5 (lower is better)
Translates to: CRDVSWASSCPFLSF*AGSGFLQLNLVLTG
Trigger: TCCTGTGAGCACCAGGTTGAGCTGCAGAAAGCCAGAACCAGCTCAGAAACTGAGAAATGGACATGAAGATGCCCAGGAAACATCTCTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427049.2
CDS CCA 90 bp CATTTCTCAGTTTCTGAGCTGGTTCTGGCTTTCTGCAGCTCAACCTaGTGCTCACAGGAGAGCTTGAGAACTCTAGAGAAGCAGGTGATT +
Preference number: 5 (lower is better)
Translates to: HFSVSELVLAFCSST*CSQESLRTLEKQVI
Trigger: AATCACCTGCTTCTCTAGAGTTCTCAAGCTCTCCTGTGAGCACCAGGTTGAGCTGCAGAAAGCCAGAACCAGCTCAGAAACTGAGAAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427049.2
CDS CCA 90 bp TTTCCCAGGAGGCTGTGTAGTTGTATTCACATTGTCGTCACTAGGTaGCAGCAGAGGGACTTCTGTGACTTTCAACCATTGGCTTTGGAA +
Preference number: 5 (lower is better)
Translates to: FPRRLCSCIHIVVTR*QQRDFCDFQPLALE
Trigger: TTCCAAAGCCAATGGTTGAAAGTCACAGAAGTCCCTCTGCTGCCACCTAGTGACGACAATGTGAATACAACTACACAGCCTCCTGGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427049.2
CDS TCA 90 bp CATATGGAAACAGCAGAATGTGACTCTGTTCTCTGTGTCTGGAAATaGATGGATCAACCCCCAGTTAGGGATGCTGTAGAGATGTTTCCT +
Preference number: 5 (lower is better)
Translates to: HMETAECDSVLCVWK*MDQPPVRDAVEMFP
Trigger: AGGAAACATCTCTACAGCATCCCTAACTGGGGGTTGATCCATTCATTTCCAGACACAGAGAACAGAGTCACATTCTGCTGTTTCCATATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427049.2
CDS GCA 90 bp AGTCTCCAATGTGCCAGCCCACTTCCATCTTGCAGATTTTGGACTTaGCAAGCCTCCAAGATTTTATGGGTCAGTTACTTAAATCTGTCT +
Preference number: 5 (lower is better)
Translates to: SLQCASPLPSCRFWT*QASKILWVSYLNLS
Trigger: AGACAGATTTAAGTAACTGACCCATAAAATCTTGGAGGCTTGGCAAGTCCAAAATCTGCAAGATGGAAGTGGGCTGGCACATTGGAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427049.2
CDS CCA 90 bp TCCTTGAGTCTCCAATGTGCCAGCCCACTTCCATCTTGCAGATTTTaGACTTGCCAAGCCTCCAAGATTTTATGGGTCAGTTACTTAAAT +
Preference number: 5 (lower is better)
Translates to: SLSLQCASPLPSCRF*TCQASKILWVSYLN
Trigger: ATTTAAGTAACTGACCCATAAAATCTTGGAGGCTTGGCAAGTCCAAAATCTGCAAGATGGAAGTGGGCTGGCACATTGGAGACTCAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427049.2
CDS GCA 90 bp TCATTATCAGTATGTGGCCAACAGGGAAATTTGCTAGATCTCAGATaGACTTTGTCTCCATTGTGTGGCCTTTCCTTGGTGTTTTTGAAT +
Preference number: 5 (lower is better)
Translates to: SLSVCGQQGNLLDLR*TLSPLCGLSLVFLN
Trigger: ATTCAAAAACACCAAGGAAAGGCCACACAATGGAGACAAAGTGCATCTGAGATCTAGCAAATTTCCCTGTTGGCCACATACTGATAATGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427049.2
CDS TCA 72 bp CGCTCAGTGCTCCGGCAGCCACAGGGTTCGCAGAGCTaGGGTCCGCCCGAGAGAGCAGCCGCGCCTCCAGCT +
Preference number: 6 (lower is better)
Translates to: RSVLRQPQGSQS*GPPERAAAPPA
Trigger: AGCTGGAGGCGCGGCTGCTCTCTCGGGCGGACCTCAGCTCTGCGAACCCTGTGGCTGCCGGAGCACTGAGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427049.2
CDS TCA 72 bp AGTGCTGGGCAGGAAACCTCACGCTCAGGCCTTATGTaGGCCTTTCTGCCCCTAATGCCCTCCTCAACCCGT +
Preference number: 6 (lower is better)
Translates to: SAGQETSRSGLM*AFLPLMPSSTR
Trigger: ACGGGTTGAGGAGGGCATTAGGGGCAGAAAGGCTCACATAAGGCCTGAGCGTGAGGTTTCCTGCCCAGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427049.2
CDS CCA 72 bp GTGAGAAGAAGGTGGGCTGCAATGGCACAGCAGTGCTaGGCAGGAAACCTCACGCTCAGGCCTTATGTGAGC +
Preference number: 6 (lower is better)
Translates to: VRRRWAAMAQQC*AGNLTLRPYVS
Trigger: GCTCACATAAGGCCTGAGCGTGAGGTTTCCTGCCCAGCACTGCTGTGCCATTGCAGCCCACCTTCTTCTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427049.2
CDS TCA 72 bp CCAGCCCCTCGCCCCTCTGCATTCATCAGCATTGGTTaGGTACATGCTGTGACTGACCGGTGTTGGTACAAT +
Preference number: 6 (lower is better)
Translates to: PAPRPSAFISIG*VHAVTDRCWYN
Trigger: ATTGTACCAACACCGGTCAGTCACAGCATGTACTCAACCAATGCTGATGAATGCAGAGGGGCGAGGGGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427049.2
CDS TCA 72 bp GATTGGCAGAGCAAGACTGTACCAGAAAGTTCCCATTaGACCCTGGCCATCGACGCAGCCCCTATAAGGGGT +
Preference number: 6 (lower is better)
Translates to: DWQSKTVPESSH*TLAIDAAPIRG
Trigger: ACCCCTTATAGGGGCTGCGTCGATGGCCAGGGTTCAATGGGAACTTTCTGGTACAGTCTTGCTCTGCCAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427049.2
CDS GCA 72 bp AGGAATTCTGCCAGCAGCCGGCCTTTGAACTCAACGTaGAACTCTTCCTTGAGTCTCCAATGTGCCAGCCCA +
Preference number: 6 (lower is better)
Translates to: RNSASSRPLNST*NSSLSLQCASP
Trigger: TGGGCTGGCACATTGGAGACTCAAGGAAGAGTTGCACGTTGAGTTCAAAGGCCGGCTGCTGGCAGAATTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427049.2
CDS CAA 72 bp AGATTGGCAGAGCAAGACTGTACCAGAAAGTTCCCATaGAACCCTGGCCATCGACGCAGCCCCTATAAGGGG +
Preference number: 6 (lower is better)
Translates to: RLAEQDCTRKFP*NPGHRRSPYKG
Trigger: CCCCTTATAGGGGCTGCGTCGATGGCCAGGGTTCAATGGGAACTTTCTGGTACAGTCTTGCTCTGCCAATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427049.2
CDS GCA 72 bp AACAGAGACCGACTTCACCTGAGCAGAAAGGAATTCTaGCAGCAGCCGGCCTTTGAACTCAACGTGCAACTC +
Preference number: 6 (lower is better)
Translates to: NRDRLHLSRKEF*QQPAFELNVQL
Trigger: GAGTTGCACGTTGAGTTCAAAGGCCGGCTGCTGGCAGAATTCCTTTCTGCTCAGGTGAAGTCGGTCTCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427049.2
CDS CAA 90 bp CTGGTTCTGGCTTTCTGCAGCTCAACCTGGTGCTCACAGGAGAGCTaGAGAACTCTAGAGAAGCAGGTGATTGGCCCTCTGAGTAAGGTT +
Preference number: 6 (lower is better)
Translates to: LVLAFCSSTWCSQES*RTLEKQVIGPLSKV
Trigger: AACCTTACTCAGAGGGCCAATCACCTGCTTCTCTAGAGTTCTCAAGCTCTCCTGTGAGCACCAGGTTGAGCTGCAGAAAGCCAGAACCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427049.2
CDS TCA 72 bp GCCTTTCTGCCCCTAATGCCCTCCTCAACCCGTCTATaGGAATGTGAGGCTTCCAATTGTGCTGCACTTAAT +
Preference number: 6 (lower is better)
Translates to: AFLPLMPSSTRL*ECEASNCAALN
Trigger: ATTAAGTGCAGCACAATTGGAAGCCTCACATTCTCATAGACGGGTTGAGGAGGGCATTAGGGGCAGAAAGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427049.2
CDS CAA 72 bp CCCCAGGAGTATTCACTTCTCTCTTCTCAGGCTGCCTaGGTGCAGACAAATATATTGTCCCCAACTTCCTGC +
Preference number: 6 (lower is better)
Translates to: PQEYSLLSSQAA*VQTNILSPTSC
Trigger: GCAGGAAGTTGGGGACAATATATTTGTCTGCACCAAGGCAGCCTGAGAAGAGAGAAGTGAATACTCCTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427049.2
CDS CAA 90 bp GTGCAACTCTTCCTTGAGTCTCCAATGTGCCAGCCCACTTCCATCTaGCAGATTTTGGACTTGCCAAGCCTCCAAGATTTTATGGGTCAG +
Preference number: 6 (lower is better)
Translates to: VQLFLESPMCQPTSI*QILDLPSLQDFMGQ
Trigger: CTGACCCATAAAATCTTGGAGGCTTGGCAAGTCCAAAATCTGCAAGATGGAAGTGGGCTGGCACATTGGAGACTCAAGGAAGAGTTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427049.2
CDS GCA 72 bp GAACTCAACGTGCAACTCTTCCTTGAGTCTCCAATGTaGCAGCCCACTTCCATCTTGCAGATTTTGGACTTG +
Preference number: 6 (lower is better)
Translates to: ELNVQLFLESPM*QPTSILQILDL
Trigger: CAAGTCCAAAATCTGCAAGATGGAAGTGGGCTGGCACATTGGAGACTCAAGGAAGAGTTGCACGTTGAGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427049.2
CDS CAA 72 bp TCTCCAATGTGCCAGCCCACTTCCATCTTGCAGATTTaGGACTTGCCAAGCCTCCAAGATTTTATGGGTCAG +
Preference number: 6 (lower is better)
Translates to: SPMCQPTSILQI*DLPSLQDFMGQ
Trigger: CTGACCCATAAAATCTTGGAGGCTTGGCAAGTCCAAAATCTGCAAGATGGAAGTGGGCTGGCACATTGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427049.2
CDS CAA 90 bp TGGTTCAAAACTTCTTTCCCAGGAGGCTGTGTAGTTGTATTCACATaGTCGTCACTAGGTGGCAGCAGAGGGACTTCTGTGACTTTCAAC +
Preference number: 6 (lower is better)
Translates to: WFKTSFPGGCVVVFT*SSLGGSRGTSVTFN
Trigger: GTTGAAAGTCACAGAAGTCCCTCTGCTGCCACCTAGTGACGACAATGTGAATACAACTACACAGCCTCCTGGGAAAGAAGTTTTGAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427049.2
CDS TCA 72 bp ACAGCAGAATGTGACTCTGTTCTCTGTGTCTGGAAATaGATGGATCAACCCCCAGTTAGGGATGCTGTAGAG +
Preference number: 6 (lower is better)
Translates to: TAECDSVLCVWK*MDQPPVRDAVE
Trigger: CTCTACAGCATCCCTAACTGGGGGTTGATCCATTCATTTCCAGACACAGAGAACAGAGTCACATTCTGCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427049.2
CDS GCA 72 bp AGGAGTATTCACTTCTCTCTTCTCAGGCTGCCTTGGTaGAGACAAATATATTGTCCCCAACTTCCTGCCTTG +
Preference number: 6 (lower is better)
Translates to: RSIHFSLLRLPW*RQIYCPQLPAL
Trigger: CAAGGCAGGAAGTTGGGGACAATATATTTGTCTGCACCAAGGCAGCCTGAGAAGAGAGAAGTGAATACTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427049.2
CDS GCA 72 bp GTATGTGGCCAACAGGGAAATTTGCTAGATCTCAGATaGACTTTGTCTCCATTGTGTGGCCTTTCCTTGGTG +
Preference number: 6 (lower is better)
Translates to: VCGQQGNLLDLR*TLSPLCGLSLV
Trigger: CACCAAGGAAAGGCCACACAATGGAGACAAAGTGCATCTGAGATCTAGCAAATTTCCCTGTTGGCCACATAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427049.2
CDS GCA 72 bp TCCTTGAGTCTCCAATGTGCCAGCCCACTTCCATCTTaGAGATTTTGGACTTGCCAAGCCTCCAAGATTTTA +
Preference number: 6 (lower is better)
Translates to: SLSLQCASPLPS*RFWTCQASKIL
Trigger: TAAAATCTTGGAGGCTTGGCAAGTCCAAAATCTGCAAGATGGAAGTGGGCTGGCACATTGGAGACTCAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427049.2
CDS CCA 72 bp AGGCTGTGTAGTTGTATTCACATTGTCGTCACTAGGTaGCAGCAGAGGGACTTCTGTGACTTTCAACCATTG +
Preference number: 6 (lower is better)
Translates to: RLCSCIHIVVTR*QQRDFCDFQPL
Trigger: CAATGGTTGAAAGTCACAGAAGTCCCTCTGCTGCCACCTAGTGACGACAATGTGAATACAACTACACAGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427049.2
CDS CAA 72 bp TTCCTTGAGTCTCCAATGTGCCAGCCCACTTCCATCTaGCAGATTTTGGACTTGCCAAGCCTCCAAGATTTT +
Preference number: 6 (lower is better)
Translates to: FLESPMCQPTSI*QILDLPSLQDF
Trigger: AAAATCTTGGAGGCTTGGCAAGTCCAAAATCTGCAAGATGGAAGTGGGCTGGCACATTGGAGACTCAAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427049.2
CDS GCA 72 bp ATAACCCCAGGAGTATTCACTTCTCTCTTCTCAGGCTaGCTTGGTGCAGACAAATATATTGTCCCCAACTTC +
Preference number: 6 (lower is better)
Translates to: ITPGVFTSLFSG*LGADKYIVPNF
Trigger: GAAGTTGGGGACAATATATTTGTCTGCACCAAGGCAGCCTGAGAAGAGAGAAGTGAATACTCCTGGGGTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427049.2
CDS GCA 72 bp TGTGCCAGCCCACTTCCATCTTGCAGATTTTGGACTTaGCAAGCCTCCAAGATTTTATGGGTCAGTTACTTA +
Preference number: 6 (lower is better)
Translates to: CASPLPSCRFWT*QASKILWVSYL
Trigger: TAAGTAACTGACCCATAAAATCTTGGAGGCTTGGCAAGTCCAAAATCTGCAAGATGGAAGTGGGCTGGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427049.2
CDS CAA 72 bp GGCCAACAGGGAAATTTGCTAGATCTCAGATGCACTTaGTCTCCATTGTGTGGCCTTTCCTTGGTGTTTTTG +
Preference number: 6 (lower is better)
Translates to: GQQGNLLDLRCT*SPLCGLSLVFL
Trigger: CAAAAACACCAAGGAAAGGCCACACAATGGAGACAAAGTGCATCTGAGATCTAGCAAATTTCCCTGTTGGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427049.2
CDS CAA 90 bp TATTCACTTCTCTCTTCTCAGGCTGCCTTGGTGCAGACAAATATATaGTCCCCAACTTCCTGCCTTGTGCCCCAAGAAGTCTTACTAAAA +
Preference number: 6 (lower is better)
Translates to: YSLLSSQAALVQTNI*SPTSCLVPQEVLLK
Trigger: TTTTAGTAAGACTTCTTGGGGCACAAGGCAGGAAGTTGGGGACAATATATTTGTCTGCACCAAGGCAGCCTGAGAAGAGAGAAGTGAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427049.2
CDS TCA 72 bp TGCATTCATCAGCATTGGTTGAGTACATGCTGTGACTaGCCGGTGTTGGTACAATGGGCACAGAGATTAATA +
Preference number: 6 (lower is better)
Translates to: CIHQHWLSTCCD*PVLVQWAQRLI
Trigger: TATTAATCTCTGTGCCCATTGTACCAACACCGGTCAGTCACAGCATGTACTCAACCAATGCTGATGAATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427049.2
CDS CCA 72 bp TGCAGATTTTGGACTTGCCAAGCCTCCAAGATTTTATaGGTCAGTTACTTAAATCTGTCTGTCTGTCCCTCT +
Preference number: 6 (lower is better)
Translates to: CRFWTCQASKIL*VSYLNLSVCPS
Trigger: AGAGGGACAGACAGACAGATTTAAGTAACTGACCCATAAAATCTTGGAGGCTTGGCAAGTCCAAAATCTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427049.2
CDS CAA 90 bp TCAGTATGTGGCCAACAGGGAAATTTGCTAGATCTCAGATGCACTTaGTCTCCATTGTGTGGCCTTTCCTTGGTGTTTTTGAATAGTAGA +
Preference number: 6 (lower is better)
Translates to: SVCGQQGNLLDLRCT*SPLCGLSLVFLNSR
Trigger: TCTACTATTCAAAAACACCAAGGAAAGGCCACACAATGGAGACAAAGTGCATCTGAGATCTAGCAAATTTCCCTGTTGGCCACATACTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427049.2
CDS CCA 72 bp GCGTTTTCTCTGGGCAGCAACTATGTTAAACCACCATaGTACCTATTAATGTCAAATAAGTACCCCACAGTA +
Preference number: 6 (lower is better)
Translates to: AFSLGSNYVKPP*YLLMSNKYPTV
Trigger: TACTGTGGGGTACTTATTTGACATTAATAGGTACCATGGTGGTTTAACATAGTTGCTGCCCAGAGAAAACGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427049.2
CDS CAA 90 bp GGCCAACAGGGAAATTTGCTAGATCTCAGATGCACTTTGTCTCCATaGTGTGGCCTTTCCTTGGTGTTTTTGAATAGTAGAGATAATCTA +
Preference number: 6 (lower is better)
Translates to: GQQGNLLDLRCTLSP*CGLSLVFLNSRDNL
Trigger: TAGATTATCTCTACTATTCAAAAACACCAAGGAAAGGCCACACAATGGAGACAAAGTGCATCTGAGATCTAGCAAATTTCCCTGTTGGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000427049.2
CDS CAA 90 bp ATTGATTTTAATACATCATTATCAGTATGTGGCCAACAGGGAAATTaGCTAGATCTCAGATGCACTTTGTCTCCATTGTGTGGCCTTTCC +
Preference number: 6 (lower is better)
Translates to: IDFNTSLSVCGQQGN*LDLRCTLSPLCGLS
Trigger: GGAAAGGCCACACAATGGAGACAAAGTGCATCTGAGATCTAGCAAATTTCCCTGTTGGCCACATACTGATAATGATGTATTAAAATCAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000427049.2
CDS CAA 72 bp AATACATCATTATCAGTATGTGGCCAACAGGGAAATTaGCTAGATCTCAGATGCACTTTGTCTCCATTGTGT +
Preference number: 6 (lower is better)
Translates to: NTSLSVCGQQGN*LDLRCTLSPLC
Trigger: ACACAATGGAGACAAAGTGCATCTGAGATCTAGCAAATTTCCCTGTTGGCCACATACTGATAATGATGTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427049.2
CDS TCA 72 bp AGTAGAGATAATCTAGTTTTAAAGCTGGTACTTTTGTaGATGTGTACTTTCATACTCCATGTCTCAGGTACC +
Preference number: 6 (lower is better)
Translates to: SRDNLVLKLVLL*MCTFILHVSGT
Trigger: GGTACCTGAGACATGGAGTATGAAAGTACACATTCACAAAAGTACCAGCTTTAAAACTAGATTATCTCTACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000427049.2