Pregenerated sensors for ECHS1 (Homo sapiens)
Ensembl gene IDs: ENSG00000127884Ensembl transcript IDs: ENST00000368547.4
Found 84 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGGACACAAGGACCCGCAGGCCCCGCTTTCCGTCCGAGCACAGCATaGCCAGAGGGACCAGCGGGGGCTCCTCAGCAGAATCTTAGATTT | + |
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Preference number: 1 (lower is better) Translates to: GTQGPAGPAFRPSTA*PEGPAGAPQQNLRF Trigger: AAATCTAAGATTCTGCTGAGGAGCCCCCGCTGGTCCCTCTGGGCATGCTGTGCTCGGACGGAAAGCGGGGCCTGCGGGTCCTTGTGTCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| 3UTR TCA 90 bp | CCAGTCAGGACCCTCACAGGCTGGGTGACGAAGGCTGTCATGCCGTaGGAGGTCGGGCCACGACCACGCAGCAATTGGAGAGGAACTGCA | + |
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Preference number: 1 (lower is better) Translates to: PVRTLTGWVTKAVMP*EVGPRPRSNWRGTA Trigger: TGCAGTTCCTCTCCAATTGCTGCGTGGTCGTGGCCCGACCTCTCACGGCATGACAGCCTTCGTCACCCAGCCTGTGAGGGTCCTGACTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| 3UTR GCA 90 bp | GAGGGACCAGCGGGGGCTCCTCAGCAGAATCTTAGATTTAGAAGGTaGTCCAGTCAGGACCCTCACAGGCTGGGTGACGAAGGCTGTCAT | + |
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Preference number: 1 (lower is better) Translates to: EGPAGAPQQNLRFRR*SSQDPHRLGDEGCH Trigger: ATGACAGCCTTCGTCACCCAGCCTGTGAGGGTCCTGACTGGAGCACCTTCTAAATCTAAGATTCTGCTGAGGAGCCCCCGCTGGTCCCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| 3UTR-3UTR TCA 90 bp | TTCAGCGGCAGGGACACAAGGACCCGCAGGCCCCGCTTTCCGTCCGAGCACAGCCTCCAAGCAGAGGTGTaGAGCAGGGGCAGCTGGTTC | + |
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Preference number: 2 (lower is better) Translates to: FSGRDTRTRRPRFPSEHSLQAEV*SRGSWF Trigger: GAACCAGCTGCCCCTGCTTCACACCTCTGCTTGGAG...GCTGTGCTCGGACGGAAAGCGGGGCCTGCGGGTCCTTGTGTCCCTGCCGCTGAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| 3UTR-3UTR CCA 90 bp | CTCAGAGCAGCCCCATTCTTCAGCGGCAGGGACACAAGGACCCGCAGGCCCCGCAGGACCCTCACAGGCTaGGTGACGAAGGCTGTCATG | + |
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Preference number: 2 (lower is better) Translates to: LRAAPFFSGRDTRTRRPRRTLTG*VTKAVM Trigger: CATGACAGCCTTCGTCACCCAGCCTGTGAGGGTCCT...GCGGGGCCTGCGGGTCCTTGTGTCCCTGCCGCTGAAGAATGGGGCTGCTCTGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| 3UTR-3UTR GCA 90 bp | CATTCTTCAGCGGCAGGGACACAAGGACCCGCAGGCCCCGCTTTCCGTCCGAGCCTTAGATTTAGAAGGTaGTCCAGTCAGGACCCTCAC | + |
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Preference number: 2 (lower is better) Translates to: HSSAAGTQGPAGPAFRPSLRFRR*SSQDPH Trigger: GTGAGGGTCCTGACTGGAGCACCTTCTAAATCTAAG...GCTCGGACGGAAAGCGGGGCCTGCGGGTCCTTGTGTCCCTGCCGCTGAAGAATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| 3UTR CAA 90 bp | GAAGGCTGTCATGCCGTGAGAGGTCGGGCCACGACCACGCAGCAATaGGAGAGGAACTGCACACCACGGACACTGCTCTTGAAAAGAGGA | + |
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Preference number: 2 (lower is better) Translates to: EGCHAVRGRATTTQQ*ERNCTPRTLLLKRG Trigger: TCCTCTTTTCAAGAGCAGTGTCCGTGGTGTGCAGTTCCTCTCCAATTGCTGCGTGGTCGTGGCCCGACCTCTCACGGCATGACAGCCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| 3UTR GCA 72 bp | GGACCCGCAGGCCCCGCTTTCCGTCCGAGCACAGCATaGCCAGAGGGACCAGCGGGGGCTCCTCAGCAGAAT | + |
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Preference number: 3 (lower is better) Translates to: GPAGPAFRPSTA*PEGPAGAPQQN Trigger: ATTCTGCTGAGGAGCCCCCGCTGGTCCCTCTGGGCATGCTGTGCTCGGACGGAAAGCGGGGCCTGCGGGTCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| 3UTR-3UTR CAA 90 bp | GACCCTCACAGGCTGGGTGACGAAGGCTGTCATGCCGTGAGAGGTCGGGCCACGACTGACAGGCTGCACTaGTCCTCTCCAAGCAGAGGT | + |
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Preference number: 3 (lower is better) Translates to: DPHRLGDEGCHAVRGRATTDRLH*SSPSRG Trigger: ACCTCTGCTTGGAGAGGACAAGTGCAGCCTGTCAGT...CGTGGCCCGACCTCTCACGGCATGACAGCCTTCGTCACCCAGCCTGTGAGGGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| 3UTR TCA 72 bp | ACCCTCACAGGCTGGGTGACGAAGGCTGTCATGCCGTaGGAGGTCGGGCCACGACCACGCAGCAATTGGAGA | + |
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Preference number: 3 (lower is better) Translates to: TLTGWVTKAVMP*EVGPRPRSNWR Trigger: TCTCCAATTGCTGCGTGGTCGTGGCCCGACCTCTCACGGCATGACAGCCTTCGTCACCCAGCCTGTGAGGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| 3UTR-3UTR CAA 90 bp | GAAGGTGCTCCAGTCAGGACCCTCACAGGCTGGGTGACGAAGGCTGTCATGCCGACGACCACGCAGCAATaGGAGAGGAACTGCACACCA | + |
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Preference number: 3 (lower is better) Translates to: EGAPVRTLTGWVTKAVMPTTTQQ*ERNCTP Trigger: TGGTGTGCAGTTCCTCTCCAATTGCTGCGTGGTCGT...CGGCATGACAGCCTTCGTCACCCAGCCTGTGAGGGTCCTGACTGGAGCACCTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| 3UTR GCA 72 bp | GCGGGGGCTCCTCAGCAGAATCTTAGATTTAGAAGGTaGTCCAGTCAGGACCCTCACAGGCTGGGTGACGAA | + |
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Preference number: 3 (lower is better) Translates to: AGAPQQNLRFRR*SSQDPHRLGDE Trigger: TTCGTCACCCAGCCTGTGAGGGTCCTGACTGGAGCACCTTCTAAATCTAAGATTCTGCTGAGGAGCCCCCGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| 3UTR-3UTR CAA 90 bp | GTTTCCCTCAGAGCAGCCCCATTCTTCAGCGGCAGGGACACAAGGACCCGCAGGAAGAGGATGATTTACTaGCTTCTAAAACTGACAGGC | + |
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Preference number: 3 (lower is better) Translates to: VSLRAAPFFSGRDTRTRRKRMIY*LLKLTG Trigger: GCCTGTCAGTTTTAGAAGCAAGTAAATCATCCTCTT...CCTGCGGGTCCTTGTGTCCCTGCCGCTGAAGAATGGGGCTGCTCTGAGGGAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| CDS-3UTR CCA 90 bp | GCAGCCCCATTCTTCAGCGGCAGGGACACAAGGACCCGCAGGCCCCGCTTTCCGGCACGGGTGAGTCTCTaGGTGCCGCCCGCACCTGGG | + |
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Preference number: 4 (lower is better) Translates to: AAPFFSGRDTRTRRPRFPARVSL*VPPAPG Trigger: CCCAGGTGCGGGCGGCACCCAGAGACTCACCCGTGC...CGGAAAGCGGGGCCTGCGGGTCCTTGTGTCCCTGCCGCTGAAGAATGGGGCTGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| CDS-3UTR TCA 90 bp | TTCAGCGGCAGGGACACAAGGACCCGCAGGCCCCGCTTTCCGTCCGAGCACAGCCCTTATCCCCGCCGGTaGGGACAATGGCCCCCACGG | + |
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Preference number: 4 (lower is better) Translates to: FSGRDTRTRRPRFPSEHSPYPRR*GQWPPR Trigger: CCGTGGGGGCCATTGTCCTCACCGGCGGGGATAAGG...GCTGTGCTCGGACGGAAAGCGGGGCCTGCGGGTCCTTGTGTCCCTGCCGCTGAA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| CDS-3UTR GCA 90 bp | TCAGAGCAGCCCCATTCTTCAGCGGCAGGGACACAAGGACCCGCAGGCCCCGCTCAGGCCATCGCAAAGTaGATTGAGGGCCTTGGGGCG | + |
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Preference number: 4 (lower is better) Translates to: SEQPHSSAAGTQGPAGPAQAIAK*IEGLGA Trigger: CGCCCCAAGGCCCTCAATGCACTTTGCGATGGCCTG...AGCGGGGCCTGCGGGTCCTTGTGTCCCTGCCGCTGAAGAATGGGGCTGCTCTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| CDS-3UTR TCA 90 bp | CCCATTCTTCAGCGGCAGGGACACAAGGACCCGCAGGCCCCGCTTTCCGTCCGACATCGCAAAGTGCATTaGGGGCCTTGGGGCGGTTCA | + |
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Preference number: 4 (lower is better) Translates to: PILQRQGHKDPQAPLSVRHRKVH*GPWGGS Trigger: TGAACCGCCCCAAGGCCCTCAATGCACTTTGCGATG...TCGGACGGAAAGCGGGGCCTGCGGGTCCTTGTGTCCCTGCCGCTGAAGAATGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| CDS-3UTR TCA 90 bp | TGCCGTGAGAGGTCGGGCCACGACCACGCAGCAATTGGAGAGGAACTGCACACCAAGGCTGTCATGCCGTaGGAGGTCGGGCCACGACCA | + |
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Preference number: 4 (lower is better) Translates to: CRERSGHDHAAIGEELHTKAVMP*EVGPRP Trigger: TGGTCGTGGCCCGACCTCTCACGGCATGACAGCCTT...GGTGTGCAGTTCCTCTCCAATTGCTGCGTGGTCGTGGCCCGACCTCTCACGGCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| CDS-3UTR TCA 90 bp | GTCGGGCCACGACCACGCAGCAATTGGAGAGGAACTGCACACCACGGACACTGCCCCTCACAGGCTGGGTaGCGAAGGCTGTCATGCCGT | + |
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Preference number: 4 (lower is better) Translates to: VGPRPRSNWRGTAHHGHCPSQAG*RRLSCR Trigger: ACGGCATGACAGCCTTCGTCACCCAGCCTGTGAGGG...GCAGTGTCCGTGGTGTGCAGTTCCTCTCCAATTGCTGCGTGGTCGTGGCCCGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| CDS-3UTR GCA 90 bp | CCCATTCTTCAGCGGCAGGGACACAAGGACCCGCAGGCCCCGCTTTCCGTCCGACTGACAAGACCTGCTTaGTTGGCGTCCTGGGCTGAG | + |
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Preference number: 4 (lower is better) Translates to: PILQRQGHKDPQAPLSVRLTRPA*LASWAE Trigger: CTCAGCCCAGGACGCCAAGCAAGCAGGTCTTGTCAG...TCGGACGGAAAGCGGGGCCTGCGGGTCCTTGTGTCCCTGCCGCTGAAGAATGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| CDS-3UTR GCA 90 bp | TCAGAGCAGCCCCATTCTTCAGCGGCAGGGACACAAGGACCCGCAGGCCCCGCTCTTGCTGACAAGACCTaGTTGCTTGGCGTCCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: SEQPHSSAAGTQGPAGPALADKT*LLGVLG Trigger: GCCCAGGACGCCAAGCAAGCAGGTCTTGTCAGCAAG...AGCGGGGCCTGCGGGTCCTTGTGTCCCTGCCGCTGAAGAATGGGGCTGCTCTGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| CDS-3UTR CCA 90 bp | TCAGCGGCAGGGACACAAGGACCCGCAGGCCCCGCTTTCCGTCCGAGCACAGCACGCCCGCACCTGGGATaGTTCCTATTAAGATCTCCG | + |
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Preference number: 4 (lower is better) Translates to: SAAGTQGPAGPAFRPSTARPHLG*FLLRSP Trigger: CGGAGATCTTAATAGGAACCATCCCAGGTGCGGGCG...TGCTGTGCTCGGACGGAAAGCGGGGCCTGCGGGTCCTTGTGTCCCTGCCGCTGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| CDS-3UTR TCA 90 bp | CATTCTTCAGCGGCAGGGACACAAGGACCCGCAGGCCCCGCTTTCCGTCCGAGCTCTTCAGGGCCTGGTTaGGCTCGTCAATCAGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: HSSAAGTQGPAGPAFRPSSSGPG*ARQSGH Trigger: ATGGCCTGATTGACGAGCTCAACCAGGCCCTGAAGA...GCTCGGACGGAAAGCGGGGCCTGCGGGTCCTTGTGTCCCTGCCGCTGAAGAATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| CDS-3UTR TCA 90 bp | AGCGTTTCCCTCAGAGCAGCCCCATTCTTCAGCGGCAGGGACACAAGGACCCGCCTCCAAGCAGAGGTGTaGAGCAGGGGCAGCTGGTTC | + |
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Preference number: 4 (lower is better) Translates to: SVSLRAAPFFSGRDTRTRLQAEV*SRGSWF Trigger: GAACCAGCTGCCCCTGCTTCACACCTCTGCTTGGAG...GCGGGTCCTTGTGTCCCTGCCGCTGAAGAATGGGGCTGCTCTGAGGGAAACGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| CDS-3UTR TCA 90 bp | CTTAGATTTAGAAGGTGCTCCAGTCAGGACCCTCACAGGCTGGGTGACGAAGGCTCCCAACAGCACGGGTaGGTCTCTGGGTGCCGCCCG | + |
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Preference number: 4 (lower is better) Translates to: LRFRRCSSQDPHRLGDEGSQQHG*VSGCRP Trigger: CGGGCGGCACCCAGAGACTCACCCGTGCTGTTGGGA...GCCTTCGTCACCCAGCCTGTGAGGGTCCTGACTGGAGCACCTTCTAAATCTAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| CDS-3UTR CCA 90 bp | CCCATTCTTCAGCGGCAGGGACACAAGGACCCGCAGGCCCCGCTTTCCGTCCGAAAGGTCTTCAGGGCCTaGTTGAGCTCGTCAATCAGG | + |
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Preference number: 4 (lower is better) Translates to: PILQRQGHKDPQAPLSVRKVFRA*LSSSIR Trigger: CCTGATTGACGAGCTCAACCAGGCCCTGAAGACCTT...TCGGACGGAAAGCGGGGCCTGCGGGTCCTTGTGTCCCTGCCGCTGAAGAATGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| CDS-3UTR CCA 90 bp | CATTCTTCAGCGGCAGGGACACAAGGACCCGCAGGCCCCGCTTTCCGTCCGAGCTTGACCTGGGTGAGGTaGTCCCAGTGCTTCAAGAAC | + |
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Preference number: 4 (lower is better) Translates to: HSSAAGTQGPAGPAFRPSLTWVR*SQCFKN Trigger: GTTCTTGAAGCACTGGGACCACCTCACCCAGGTCAA...GCTCGGACGGAAAGCGGGGCCTGCGGGTCCTTGTGTCCCTGCCGCTGAAGAATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| CDS-3UTR CCA 90 bp | TCATGCCGTGAGAGGTCGGGCCACGACCACGCAGCAATTGGAGAGGAACTGCACGCTTGCTTGGCGTCCTaGGCTGAGATCCGGTCACCA | + |
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Preference number: 4 (lower is better) Translates to: SCRERSGHDHAAIGEELHACLAS*AEIRSP Trigger: TGGTGACCGGATCTCAGCCCAGGACGCCAAGCAAGC...GTGCAGTTCCTCTCCAATTGCTGCGTGGTCGTGGCCCGACCTCTCACGGCATGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| 3UTR CAA 72 bp | CATGCCGTGAGAGGTCGGGCCACGACCACGCAGCAATaGGAGAGGAACTGCACACCACGGACACTGCTCTTG | + |
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Preference number: 4 (lower is better) Translates to: HAVRGRATTTQQ*ERNCTPRTLLL Trigger: CAAGAGCAGTGTCCGTGGTGTGCAGTTCCTCTCCAATTGCTGCGTGGTCGTGGCCCGACCTCTCACGGCATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| CDS-3UTR TCA 90 bp | GGGCCACGACCACGCAGCAATTGGAGAGGAACTGCACACCACGGACACTGCTCTAGATCCGGTCACCAGTaGGGACCATCTCCATCGCCA | + |
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Preference number: 4 (lower is better) Translates to: GPRPRSNWRGTAHHGHCSRSGHQ*GPSPSP Trigger: TGGCGATGGAGATGGTCCTCACTGGTGACCGGATCT...AGAGCAGTGTCCGTGGTGTGCAGTTCCTCTCCAATTGCTGCGTGGTCGTGGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| CDS-3UTR GCA 90 bp | TTCAGCGGCAGGGACACAAGGACCCGCAGGCCCCGCTTTCCGTCCGAGCACAGCCTTAGATTTAGAAGGTaGTCCAGTCAGGACCCTCAC | + |
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Preference number: 4 (lower is better) Translates to: FSGRDTRTRRPRFPSEHSLRFRR*SSQDPH Trigger: GTGAGGGTCCTGACTGGAGCACCTTCTAAATCTAAG...GCTGTGCTCGGACGGAAAGCGGGGCCTGCGGGTCCTTGTGTCCCTGCCGCTGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| CDS-3UTR GCA 90 bp | GAAGGTGCTCCAGTCAGGACCCTCACAGGCTGGGTGACGAAGGCTGTCATGCCGGTGAGGTGGTCCCAGTaGTTCAAGAACTTGCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: EGAPVRTLTGWVTKAVMPVRWSQ*FKNLLE Trigger: CTCCAGCAAGTTCTTGAAGCACTGGGACCACCTCAC...CGGCATGACAGCCTTCGTCACCCAGCCTGTGAGGGTCCTGACTGGAGCACCTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| CDS-3UTR CCA 90 bp | CATTCTTCAGCGGCAGGGACACAAGGACCCGCAGGCCCCGCTTTCCGTCCGAGCGCAGCTGGTTCTCACTaGTCTTTGAAGTTGGCCTTT | + |
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Preference number: 4 (lower is better) Translates to: HSSAAGTQGPAGPAFRPSAAGSH*SLKLAF Trigger: AAAGGCCAACTTCAAAGACCAGTGAGAACCAGCTGC...GCTCGGACGGAAAGCGGGGCCTGCGGGTCCTTGTGTCCCTGCCGCTGAAGAATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| CDS-3UTR TCA 90 bp | GACCCTCACAGGCTGGGTGACGAAGGCTGTCATGCCGTGAGAGGTCGGGCCACGTCTCACCGGCATAGATaGTATCACACATCATGGCAA | + |
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Preference number: 4 (lower is better) Translates to: DPHRLGDEGCHAVRGRATSHRHR*YHTSWQ Trigger: TTGCCATGATGTGTGATATCATCTATGCCGGTGAGA...CGTGGCCCGACCTCTCACGGCATGACAGCCTTCGTCACCCAGCCTGTGAGGGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| CDS-3UTR TCA 90 bp | GTTTCCCTCAGAGCAGCCCCATTCTTCAGCGGCAGGGACACAAGGACCCGCAGGCAGGACAAATCTTGCTaGCAAGACCTGCTTGCTTGG | + |
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Preference number: 4 (lower is better) Translates to: VSLRAAPFFSGRDTRTRRQDKSC*QDLLAW Trigger: CCAAGCAAGCAGGTCTTGTCAGCAAGATTTGTCCTG...CCTGCGGGTCCTTGTGTCCCTGCCGCTGAAGAATGGGGCTGCTCTGAGGGAAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| CDS-3UTR TCA 90 bp | TCCCTCAGAGCAGCCCCATTCTTCAGCGGCAGGGACACAAGGACCCGCAGGCCCAAAAGCTGCATTCACTaGTTCTTTGGCCATCGCTAC | + |
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Preference number: 4 (lower is better) Translates to: SLRAAPFFSGRDTRTRRPKSCIH*FFGHRY Trigger: GTAGCGATGGCCAAAGAATCAGTGAATGCAGCTTTT...GGGCCTGCGGGTCCTTGTGTCCCTGCCGCTGAAGAATGGGGCTGCTCTGAGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| CDS-3UTR TCA 90 bp | ACCACGCAGCAATTGGAGAGGAACTGCACACCACGGACACTGCTCTTGAAAAGACTTGGCGTCCTGGGCTaGGATCCGGTCACCAGTGAG | + |
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Preference number: 4 (lower is better) Translates to: TTQQLERNCTPRTLLLKRLGVLG*DPVTSE Trigger: CTCACTGGTGACCGGATCTCAGCCCAGGACGCCAAG...TCTTTTCAAGAGCAGTGTCCGTGGTGTGCAGTTCCTCTCCAATTGCTGCGTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| CDS-3UTR CCA 90 bp | AGGGACCAGCGGGGGCTCCTCAGCAGAATCTTAGATTTAGAAGGTGCTCCAGTCCAAGACCTGCTTGCTTaGCGTCCTGGGCTGAGATCC | + |
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Preference number: 4 (lower is better) Translates to: RDQRGLLSRILDLEGAPVQDLLA*RPGLRS Trigger: GGATCTCAGCCCAGGACGCCAAGCAAGCAGGTCTTG...GACTGGAGCACCTTCTAAATCTAAGATTCTGCTGAGGAGCCCCCGCTGGTCCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| CDS-3UTR CCA 90 bp | AGCGTTTCCCTCAGAGCAGCCCCATTCTTCAGCGGCAGGGACACAAGGACCCGCTTTCTGCACACTGGATaGCTTCTTCCACCAGTGTCT | + |
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Preference number: 4 (lower is better) Translates to: SVSLRAAPFFSGRDTRTRFLHTG*LLPPVS Trigger: AGACACTGGTGGAAGAAGCCATCCAGTGTGCAGAAA...GCGGGTCCTTGTGTCCCTGCCGCTGAAGAATGGGGCTGCTCTGAGGGAAACGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| CDS-3UTR CCA 90 bp | GACCAGCGGGGGCTCCTCAGCAGAATCTTAGATTTAGAAGGTGCTCCAGTCAGGGACAGCAGCGATGACTaGCTTCTTGACCTGGGTGAG | + |
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Preference number: 4 (lower is better) Translates to: DQRGLLSRILDLEGAPVRDSSDD*LLDLGE Trigger: CTCACCCAGGTCAAGAAGCCAGTCATCGCTGCTGTC...CCTGACTGGAGCACCTTCTAAATCTAAGATTCTGCTGAGGAGCCCCCGCTGGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| CDS-3UTR CCA 90 bp | CCCATTCTTCAGCGGCAGGGACACAAGGACCCGCAGGCCCCGCTTTCCGTCCGACTTTCCGGTCATCAGTaGCAAAGGTTGAATAAAAGA | + |
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Preference number: 4 (lower is better) Translates to: PILQRQGHKDPQAPLSVRLSGHQ*QRLNKR Trigger: TCTTTTATTCAACCTTTGCCACTGATGACCGGAAAG...TCGGACGGAAAGCGGGGCCTGCGGGTCCTTGTGTCCCTGCCGCTGAAGAATGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| CDS-3UTR CCA 90 bp | GGACCAGCGGGGGCTCCTCAGCAGAATCTTAGATTTAGAAGGTGCTCCAGTCAGCGACCACGCAGCAATTaGAGAGGAACTGCACACCAC | + |
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Preference number: 4 (lower is better) Translates to: GPAGAPQQNLRFRRCSSQRPRSN*RGTAHH Trigger: GTGGTGTGCAGTTCCTCTCCAATTGCTGCGTGGTCG...CTGACTGGAGCACCTTCTAAATCTAAGATTCTGCTGAGGAGCCCCCGCTGGTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| CDS-3UTR CCA 90 bp | CTTAGATTTAGAAGGTGCTCCAGTCAGGACCCTCACAGGCTGGGTGACGAAGGCTTGGGGCGGTTCAGTTaGATCAACCCCACGGTGTTA | + |
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Preference number: 4 (lower is better) Translates to: LRFRRCSSQDPHRLGDEGLGRFS*INPTVL Trigger: TAACACCGTGGGGTTGATCCAACTGAACCGCCCCAA...GCCTTCGTCACCCAGCCTGTGAGGGTCCTGACTGGAGCACCTTCTAAATCTAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| CDS-3UTR CCA 90 bp | AGAATCTTAGATTTAGAAGGTGCTCCAGTCAGGACCCTCACAGGCTGGGTGACGAGGACCCTCACAGGCTaGGTGACGAAGGCTGTCATG | + |
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Preference number: 4 (lower is better) Translates to: RILDLEGAPVRTLTGWVTRTLTG*VTKAVM Trigger: CATGACAGCCTTCGTCACCCAGCCTGTGAGGGTCCT...CGTCACCCAGCCTGTGAGGGTCCTGACTGGAGCACCTTCTAAATCTAAGATTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| CDS-3UTR GCA 90 bp | AGGTGCTCCAGTCAGGACCCTCACAGGCTGGGTGACGAAGGCTGTCATGCCGTGTGGAAACTCAGGTTCTaGATTTCCTTGATATCAGCT | + |
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Preference number: 4 (lower is better) Translates to: RCSSQDPHRLGDEGCHAVWKLRF*ISLISA Trigger: AGCTGATATCAAGGAAATGCAGAACCTGAGTTTCCA...CACGGCATGACAGCCTTCGTCACCCAGCCTGTGAGGGTCCTGACTGGAGCACCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| CDS-3UTR GCA 90 bp | TTAGATTTAGAAGGTGCTCCAGTCAGGACCCTCACAGGCTGGGTGACGAAGGCTCAATTGGAGAGGAACTaGACACCACGGACACTGCTC | + |
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Preference number: 4 (lower is better) Translates to: LDLEGAPVRTLTGWVTKAQLERN*TPRTLL Trigger: GAGCAGTGTCCGTGGTGTGCAGTTCCTCTCCAATTG...AGCCTTCGTCACCCAGCCTGTGAGGGTCCTGACTGGAGCACCTTCTAAATCTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| CDS-3UTR TCA 90 bp | GTTTCCCTCAGAGCAGCCCCATTCTTCAGCGGCAGGGACACAAGGACCCGCAGGATCAGTGGCAAAGGTTaGATAAAAGAGTTTCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: VSLRAAPFFSGRDTRTRRISGKG*IKEFLL Trigger: GAGAAGAAACTCTTTTATTCAACCTTTGCCACTGAT...CCTGCGGGTCCTTGTGTCCCTGCCGCTGAAGAATGGGGCTGCTCTGAGGGAAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| CDS-3UTR CCA 90 bp | AGCAGAATCTTAGATTTAGAAGGTGCTCCAGTCAGGACCCTCACAGGCTGGGTGCATTCACTGATTCTTTaGCCATCGCTACTACAATTT | + |
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Preference number: 4 (lower is better) Translates to: SRILDLEGAPVRTLTGWVHSLIL*PSLLQF Trigger: AAATTGTAGTAGCGATGGCCAAAGAATCAGTGAATG...CACCCAGCCTGTGAGGGTCCTGACTGGAGCACCTTCTAAATCTAAGATTCTGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| CDS-3UTR CAA 90 bp | CAGCCCCATTCTTCAGCGGCAGGGACACAAGGACCCGCAGGCCCCGCTTTCCGTCCATCGCAAAGTGCATaGAGGGCCTTGGGGCGGTTC | + |
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Preference number: 5 (lower is better) Translates to: QPHSSAAGTQGPAGPAFRPSQSA*RALGRF Trigger: GAACCGCCCCAAGGCCCTCAATGCACTTTGCGATGG...ACGGAAAGCGGGGCCTGCGGGTCCTTGTGTCCCTGCCGCTGAAGAATGGGGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| CDS-3UTR CAA 90 bp | CAGCCCCATTCTTCAGCGGCAGGGACACAAGGACCCGCAGGCCCCGCTTTCCGTACAAGACCTGCTTGCTaGGCGTCCTGGGCTGAGATC | + |
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Preference number: 5 (lower is better) Translates to: QPHSSAAGTQGPAGPAFRTRPAC*ASWAEI Trigger: GATCTCAGCCCAGGACGCCAAGCAAGCAGGTCTTGT...ACGGAAAGCGGGGCCTGCGGGTCCTTGTGTCCCTGCCGCTGAAGAATGGGGCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| CDS-3UTR CAA 90 bp | TTCAGCGGCAGGGACACAAGGACCCGCAGGCCCCGCTTTCCGTCCGAGCACAGCACGACCACGCAGCAATaGGAGAGGAACTGCACACCA | + |
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Preference number: 5 (lower is better) Translates to: FSGRDTRTRRPRFPSEHSTTTQQ*ERNCTP Trigger: TGGTGTGCAGTTCCTCTCCAATTGCTGCGTGGTCGT...GCTGTGCTCGGACGGAAAGCGGGGCCTGCGGGTCCTTGTGTCCCTGCCGCTGAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| CDS CCA 90 bp | ACAATGGCCCCCACGGCCGGGTCCTCCTCGAAGGTCTTCAGGGCCTaGTTGAGCTCGTCAATCAGGCCATCGCAAAGTGCATTGAGGGCC | + |
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Preference number: 5 (lower is better) Translates to: TMAPTAGSSSKVFRA*LSSSIRPSQSALRA Trigger: GGCCCTCAATGCACTTTGCGATGGCCTGATTGACGAGCTCAACCAGGCCCTGAAGACCTTCGAGGAGGACCCGGCCGTGGGGGCCATTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| CDS-3UTR CAA 90 bp | AGCGTTTCCCTCAGAGCAGCCCCATTCTTCAGCGGCAGGGACACAAGGACCCGCGCGATGACTGGCTTCTaGACCTGGGTGAGGTGGTCC | + |
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Preference number: 5 (lower is better) Translates to: SVSLRAAPFFSGRDTRTRAMTGF*TWVRWS Trigger: GGACCACCTCACCCAGGTCAAGAAGCCAGTCATCGC...GCGGGTCCTTGTGTCCCTGCCGCTGAAGAATGGGGCTGCTCTGAGGGAAACGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| CDS-3UTR CAA 90 bp | CATTCTTCAGCGGCAGGGACACAAGGACCCGCAGGCCCCGCTTTCCGTCCGAGCACTGACAGGCTGCACTaGTCCTCTCCAAGCAGAGGT | + |
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Preference number: 5 (lower is better) Translates to: HSSAAGTQGPAGPAFRPSTDRLH*SSPSRG Trigger: ACCTCTGCTTGGAGAGGACAAGTGCAGCCTGTCAGT...GCTCGGACGGAAAGCGGGGCCTGCGGGTCCTTGTGTCCCTGCCGCTGAAGAATG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| CDS-3UTR CAA 90 bp | AGGTGCTCCAGTCAGGACCCTCACAGGCTGGGTGACGAAGGCTGTCATGCCGTGGTCTTCAGGGCCTGGTaGAGCTCGTCAATCAGGCCA | + |
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Preference number: 5 (lower is better) Translates to: RCSSQDPHRLGDEGCHAVVFRAW*SSSIRP Trigger: TGGCCTGATTGACGAGCTCAACCAGGCCCTGAAGAC...CACGGCATGACAGCCTTCGTCACCCAGCCTGTGAGGGTCCTGACTGGAGCACCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| CDS-3UTR CAA 90 bp | GGGCCACGACCACGCAGCAATTGGAGAGGAACTGCACACCACGGACACTGCTCTAGTGCATTGAGGGCCTaGGGGCGGTTCAGTTGGATC | + |
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Preference number: 5 (lower is better) Translates to: GPRPRSNWRGTAHHGHCSSALRA*GRFSWI Trigger: GATCCAACTGAACCGCCCCAAGGCCCTCAATGCACT...AGAGCAGTGTCCGTGGTGTGCAGTTCCTCTCCAATTGCTGCGTGGTCGTGGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| CDS GCA 90 bp | GGTCTTCAGGGCCTGGTTGAGCTCGTCAATCAGGCCATCGCAAAGTaGATTGAGGGCCTTGGGGCGGTTCAGTTGGATCAACCCCACGGT | + |
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Preference number: 5 (lower is better) Translates to: GLQGLVELVNQAIAK*IEGLGAVQLDQPHG Trigger: ACCGTGGGGTTGATCCAACTGAACCGCCCCAAGGCCCTCAATGCACTTTGCGATGGCCTGATTGACGAGCTCAACCAGGCCCTGAAGACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| CDS CCA 90 bp | CTCACAGCCCCCGCCAAAGGCATAGCCATTGACAGCAGCGATGACTaGCTTCTTGACCTGGGTGAGGTGGTCCCAGTGCTTCAAGAACTT | + |
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Preference number: 5 (lower is better) Translates to: LTAPAKGIAIDSSDD*LLDLGEVVPVLQEL Trigger: AAGTTCTTGAAGCACTGGGACCACCTCACCCAGGTCAAGAAGCCAGTCATCGCTGCTGTCAATGGCTATGCCTTTGGCGGGGGCTGTGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| CDS-3UTR CAA 90 bp | GTTTCCCTCAGAGCAGCCCCATTCTTCAGCGGCAGGGACACAAGGACCCGCAGGTCAACAGGACAAATCTaGCTGACAAGACCTGCTTGC | + |
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Preference number: 5 (lower is better) Translates to: VSLRAAPFFSGRDTRTRRSTGQI*LTRPAC Trigger: GCAAGCAGGTCTTGTCAGCAAGATTTGTCCTGTTGA...CCTGCGGGTCCTTGTGTCCCTGCCGCTGAAGAATGGGGCTGCTCTGAGGGAAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| CDS-3UTR CAA 90 bp | TCAGCGGCAGGGACACAAGGACCCGCAGGCCCCGCTTTCCGTCCGAGCACAGCACATCAGTGGCAAAGGTaGAATAAAAGAGTTTCTTCT | + |
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Preference number: 5 (lower is better) Translates to: SAAGTQGPAGPAFRPSTAHQWQR*NKRVSS Trigger: AGAAGAAACTCTTTTATTCAACCTTTGCCACTGATG...TGCTGTGCTCGGACGGAAAGCGGGGCCTGCGGGTCCTTGTGTCCCTGCCGCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| CDS-3UTR CAA 90 bp | AGCAGAATCTTAGATTTAGAAGGTGCTCCAGTCAGGACCCTCACAGGCTGGGTGCTTGGGGCGGTTCAGTaGGATCAACCCCACGGTGTT | + |
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Preference number: 5 (lower is better) Translates to: SRILDLEGAPVRTLTGWVLGAVQ*DQPHGV Trigger: AACACCGTGGGGTTGATCCAACTGAACCGCCCCAAG...CACCCAGCCTGTGAGGGTCCTGACTGGAGCACCTTCTAAATCTAAGATTCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| CDS TCA 90 bp | TTAAGATCTCCGGCTGTGCAAACTGGGCCTTCTCACCGGCATAGATaGTATCACACATCATGGCAAGCTCACAGCCCCCGCCAAAGGCAT | + |
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Preference number: 5 (lower is better) Translates to: LRSPAVQTGPSHRHR*YHTSWQAHSPRQRH Trigger: ATGCCTTTGGCGGGGGCTGTGAGCTTGCCATGATGTGTGATATCATCTATGCCGGTGAGAAGGCCCAGTTTGCACAGCCGGAGATCTTAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| CDS-3UTR CAA 90 bp | GAAGGTGCTCCAGTCAGGACCCTCACAGGCTGGGTGACGAAGGCTGTCATGCCGAAGAGGATGATTTACTaGCTTCTAAAACTGACAGGC | + |
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Preference number: 5 (lower is better) Translates to: EGAPVRTLTGWVTKAVMPKRMIY*LLKLTG Trigger: GCCTGTCAGTTTTAGAAGCAAGTAAATCATCCTCTT...CGGCATGACAGCCTTCGTCACCCAGCCTGTGAGGGTCCTGACTGGAGCACCTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| CDS-3UTR CAA 90 bp | AGGGACCAGCGGGGGCTCCTCAGCAGAATCTTAGATTTAGAAGGTGCTCCAGTCGCATTCACTGATTCTTaGGCCATCGCTACTACAATT | + |
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Preference number: 5 (lower is better) Translates to: RDQRGLLSRILDLEGAPVAFTDS*AIATTI Trigger: AATTGTAGTAGCGATGGCCAAAGAATCAGTGAATGC...GACTGGAGCACCTTCTAAATCTAAGATTCTGCTGAGGAGCCCCCGCTGGTCCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| CDS TCA 72 bp | TATCAGCTCCAGCTGCAAAGGCCTTATCCCCGCCGGTaGGGACAATGGCCCCCACGGCCGGGTCCTCCTCGA | + |
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Preference number: 6 (lower is better) Translates to: YQLQLQRPYPRR*GQWPPRPGPPR Trigger: TCGAGGAGGACCCGGCCGTGGGGGCCATTGTCCTCACCGGCGGGGATAAGGCCTTTGCAGCTGGAGCTGATA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| CDS TCA 72 bp | CCATCTCCATCGCCAGCGACTTCCCAACAGCACGGGTaGGTCTCTGGGTGCCGCCCGCACCTGGGATGGTTC | + |
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Preference number: 6 (lower is better) Translates to: PSPSPATSQQHG*VSGCRPHLGWF Trigger: GAACCATCCCAGGTGCGGGCGGCACCCAGAGACTCACCCGTGCTGTTGGGAAGTCGCTGGCGATGGAGATGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| CDS CAA 90 bp | ATGGCCCCCACGGCCGGGTCCTCCTCGAAGGTCTTCAGGGCCTGGTaGAGCTCGTCAATCAGGCCATCGCAAAGTGCATTGAGGGCCTTG | + |
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Preference number: 6 (lower is better) Translates to: MAPTAGSSSKVFRAW*SSSIRPSQSALRAL Trigger: CAAGGCCCTCAATGCACTTTGCGATGGCCTGATTGACGAGCTCAACCAGGCCCTGAAGACCTTCGAGGAGGACCCGGCCGTGGGGGCCAT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| CDS CCA 72 bp | CCCACGGCCGGGTCCTCCTCGAAGGTCTTCAGGGCCTaGTTGAGCTCGTCAATCAGGCCATCGCAAAGTGCA | + |
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Preference number: 6 (lower is better) Translates to: PTAGSSSKVFRA*LSSSIRPSQSA Trigger: TGCACTTTGCGATGGCCTGATTGACGAGCTCAACCAGGCCCTGAAGACCTTCGAGGAGGACCCGGCCGTGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| CDS TCA 72 bp | CTTGCTTGGCGTCCTGGGCTGAGATCCGGTCACCAGTaGGGACCATCTCCATCGCCAGCGACTTCCCAACAG | + |
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Preference number: 6 (lower is better) Translates to: LAWRPGLRSGHQ*GPSPSPATSQQ Trigger: CTGTTGGGAAGTCGCTGGCGATGGAGATGGTCCTCACTGGTGACCGGATCTCAGCCCAGGACGCCAAGCAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| CDS CCA 72 bp | ATCGCCAGCGACTTCCCAACAGCACGGGTGAGTCTCTaGGTGCCGCCCGCACCTGGGATGGTTCCTATTAAG | + |
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Preference number: 6 (lower is better) Translates to: IASDFPTARVSL*VPPAPGMVPIK Trigger: CTTAATAGGAACCATCCCAGGTGCGGGCGGCACCCAGAGACTCACCCGTGCTGTTGGGAAGTCGCTGGCGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| CDS TCA 72 bp | CTTGCTGACAAGACCTGCTTGCTTGGCGTCCTGGGCTaGGATCCGGTCACCAGTGAGGACCATCTCCATCGC | + |
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Preference number: 6 (lower is better) Translates to: LADKTCLLGVLG*DPVTSEDHLHR Trigger: GCGATGGAGATGGTCCTCACTGGTGACCGGATCTCAGCCCAGGACGCCAAGCAAGCAGGTCTTGTCAGCAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| CDS CAA 72 bp | ACGGCCGGGTCCTCCTCGAAGGTCTTCAGGGCCTGGTaGAGCTCGTCAATCAGGCCATCGCAAAGTGCATTG | + |
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Preference number: 6 (lower is better) Translates to: TAGSSSKVFRAW*SSSIRPSQSAL Trigger: CAATGCACTTTGCGATGGCCTGATTGACGAGCTCAACCAGGCCCTGAAGACCTTCGAGGAGGACCCGGCCGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| CDS TCA 72 bp | CCGGCTGTGCAAACTGGGCCTTCTCACCGGCATAGATaGTATCACACATCATGGCAAGCTCACAGCCCCCGC | + |
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Preference number: 6 (lower is better) Translates to: PAVQTGPSHRHR*YHTSWQAHSPR Trigger: GCGGGGGCTGTGAGCTTGCCATGATGTGTGATATCATCTATGCCGGTGAGAAGGCCCAGTTTGCACAGCCGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| CDS CCA 72 bp | CCCGCCAAAGGCATAGCCATTGACAGCAGCGATGACTaGCTTCTTGACCTGGGTGAGGTGGTCCCAGTGCTT | + |
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Preference number: 6 (lower is better) Translates to: PAKGIAIDSSDD*LLDLGEVVPVL Trigger: AAGCACTGGGACCACCTCACCCAGGTCAAGAAGCCAGTCATCGCTGCTGTCAATGGCTATGCCTTTGGCGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| CDS CAA 90 bp | TTCAGGGCCTGGTTGAGCTCGTCAATCAGGCCATCGCAAAGTGCATaGAGGGCCTTGGGGCGGTTCAGTTGGATCAACCCCACGGTGTTA | + |
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Preference number: 6 (lower is better) Translates to: FRAWLSSSIRPSQSA*RALGRFSWINPTVL Trigger: TAACACCGTGGGGTTGATCCAACTGAACCGCCCCAAGGCCCTCAATGCACTTTGCGATGGCCTGATTGACGAGCTCAACCAGGCCCTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| CDS GCA 72 bp | GGCCTGGTTGAGCTCGTCAATCAGGCCATCGCAAAGTaGATTGAGGGCCTTGGGGCGGTTCAGTTGGATCAA | + |
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Preference number: 6 (lower is better) Translates to: GLVELVNQAIAK*IEGLGAVQLDQ Trigger: TTGATCCAACTGAACCGCCCCAAGGCCCTCAATGCACTTTGCGATGGCCTGATTGACGAGCTCAACCAGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| CDS CAA 72 bp | TGGTTGAGCTCGTCAATCAGGCCATCGCAAAGTGCATaGAGGGCCTTGGGGCGGTTCAGTTGGATCAACCCC | + |
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Preference number: 6 (lower is better) Translates to: WLSSSIRPSQSA*RALGRFSWINP Trigger: GGGGTTGATCCAACTGAACCGCCCCAAGGCCCTCAATGCACTTTGCGATGGCCTGATTGACGAGCTCAACCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| CDS CAA 72 bp | TCGTCAATCAGGCCATCGCAAAGTGCATTGAGGGCCTaGGGGCGGTTCAGTTGGATCAACCCCACGGTGTTA | + |
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Preference number: 6 (lower is better) Translates to: SSIRPSQSALRA*GRFSWINPTVL Trigger: TAACACCGTGGGGTTGATCCAACTGAACCGCCCCAAGGCCCTCAATGCACTTTGCGATGGCCTGATTGACGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| CDS CAA 90 bp | TGGTTGAGCTCGTCAATCAGGCCATCGCAAAGTGCATTGAGGGCCTaGGGGCGGTTCAGTTGGATCAACCCCACGGTGTTATTCTTCCCT | + |
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Preference number: 6 (lower is better) Translates to: WLSSSIRPSQSALRA*GRFSWINPTVLFFP Trigger: AGGGAAGAATAACACCGTGGGGTTGATCCAACTGAACCGCCCCAAGGCCCTCAATGCACTTTGCGATGGCCTGATTGACGAGCTCAACCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| CDS GCA 72 bp | ACTCAGGTTCTGCATTTCCTTGATATCAGCTCCAGCTaGAAAGGCCTTATCCCCGCCGGTGAGGACAATGGC | + |
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Preference number: 6 (lower is better) Translates to: TQVLHFLDISSS*KGLIPAGEDNG Trigger: GCCATTGTCCTCACCGGCGGGGATAAGGCCTTTGCAGCTGGAGCTGATATCAAGGAAATGCAGAACCTGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| CDS CAA 90 bp | TCCAAGCAGAGGTGTGAAGCAGGGGCAGCTGGTTCTCACTGGTCTTaGAAGTTGGCCTTTCTCTTTTCCACAAACGCGGTCATCCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: SKQRCEAGAAGSHWS*KLAFLFSTNAVIPS Trigger: AGAAGGGATGACCGCGTTTGTGGAAAAGAGAAAGGCCAACTTCAAAGACCAGTGAGAACCAGCTGCCCCTGCTTCACACCTCTGCTTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| CDS CCA 72 bp | TCGCAAAGTGCATTGAGGGCCTTGGGGCGGTTCAGTTaGATCAACCCCACGGTGTTATTCTTCCCTCTTTTT | + |
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Preference number: 6 (lower is better) Translates to: SQSALRALGRFS*INPTVLFFPLF Trigger: AAAAAGAGGGAAGAATAACACCGTGGGGTTGATCCAACTGAACCGCCCCAAGGCCCTCAATGCACTTTGCGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| CDS CAA 72 bp | ATCGCAAAGTGCATTGAGGGCCTTGGGGCGGTTCAGTaGGATCAACCCCACGGTGTTATTCTTCCCTCTTTT | + |
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Preference number: 6 (lower is better) Translates to: IAKCIEGLGAVQ*DQPHGVILPSF Trigger: AAAAGAGGGAAGAATAACACCGTGGGGTTGATCCAACTGAACCGCCCCAAGGCCCTCAATGCACTTTGCGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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| CDS CAA 72 bp | GTTAATGTCATTTCAAAAGCTGCATTCACTGATTCTTaGGCCATCGCTACTACAATTTTAGAATTGCTGGCA | + |
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Preference number: 6 (lower is better) Translates to: VNVISKAAFTDS*AIATTILELLA Trigger: TGCCAGCAATTCTAAAATTGTAGTAGCGATGGCCAAAGAATCAGTGAATGCAGCTTTTGAAATGACATTAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000368547.4 |
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