RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ECHDC2 (Homo sapiens)

Ensembl gene IDs: ENSG00000121310

Ensembl transcript IDs: ENST00000358358.9, ENST00000371520.5, ENST00000371522.9, ENST00000460612.5, ENST00000463923.5, ENST00000467988.2, ENST00000474789.1, ENST00000476477.6, ENST00000479183.6, ENST00000480312.6, ENST00000488268.5, ENST00000493896.2, ENST00000495920.5, ENST00000498544.5, ENST00000536120.5, ENST00000539680.1, ENST00000542552.1, ENST00000543419.5, ENST00000544365.5, ENST00000544531.5

Found 514 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CTCAGTGATCCCTGTAAGGAGTCAGGGCAGCCACGGGAAAGCAGCTaGCTCTGCCTAATCCTGGGCTGCGGGCTGGGGACTGGAGGCAGG +
Preference number: 1 (lower is better)
Translates to: LSDPCKESGQPRESS*LCLILGCGLGTGGR
Trigger: CCTGCCTCCAGTCCCCAGCCCGCAGCCCAGGATTAGGCAGAGCCAGCTGCTTTCCCGTGGCTGCCCTGACTCCTTACAGGGATCACTGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371520.5
3UTR TCA 90 bp CCTTCAGGTCTGCACCTGCACAGAACACGCCCTTCACTCCACTTCTaGAGAGCAGGACACGCACTTGCCGGTCCTCCCGCAGCTGGGCCA +
Preference number: 1 (lower is better)
Translates to: PSGLHLHRTRPSLHF*RAGHALAGPPAAGP
Trigger: TGGCCCAGCTGCGGGAGGACCGGCAAGTGCGTGTCCTGCTCTTCAGAAGTGGAGTGAAGGGCGTGTTCTGTGCAGGTGCAGACCTGAAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371520.5
ENST00000476477.6
ENST00000544365.5
3UTR CCA 90 bp GGTGCAGGGAAGGCTGCGATGTCATTCATCAGGCCCCGGAGTCGCTaGACAAACACCCCCACCTCTGCTTCACTCATCTGTTCCCGCTCC +
Preference number: 1 (lower is better)
Translates to: GAGKAAMSFIRPRSR*TNTPTSASLICSRS
Trigger: GGAGCGGGAACAGATGAGTGAAGCAGAGGTGGGGGTGTTTGTCCAGCGACTCCGGGGCCTGATGAATGACATCGCAGCCTTCCCTGCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476477.6
3UTR TCA 90 bp GAATGGCCAGGCTTGAACCCTGAGGGTGGGGCGGGACACAAAAGCTaGAGAGCCAGAACTCCCTCTCTGAGAGAACTGCCCTCGGTCATC +
Preference number: 1 (lower is better)
Translates to: EWPGLNPEGGAGHKS*RARTPSLRELPSVI
Trigger: GATGACCGAGGGCAGTTCTCTCAGAGAGGGAGTTCTGGCTCTTCAGCTTTTGTGTCCCGCCCCACCCTCAGGGTTCAAGCCTGGCCATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544365.5
3UTR GCA 90 bp GTCATTCATCAGGCCCCGGAGTCGCTGGACAAACACCCCCACCTCTaGTTCACTCATCTGTTCCCGCTCCTTCAGGTCTGCACCTGCACA +
Preference number: 1 (lower is better)
Translates to: VIHQAPESLDKHPHL*FTHLFPLLQVCTCT
Trigger: TGTGCAGGTGCAGACCTGAAGGAGCGGGAACAGATGAGTGAAGCAGAGGTGGGGGTGTTTGTCCAGCGACTCCGGGGCCTGATGAATGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371520.5
ENST00000476477.6
ENST00000544365.5
3UTR CCA 90 bp ATGACTGCCGAGGAAGCGATGTCATTCATCAGGCCCCGGAGTCGCTaGACAAACACCCCCACCTCTGCTTCACTCATCTGTTCCCGCTCC +
Preference number: 1 (lower is better)
Translates to: MTAEEAMSFIRPRSR*TNTPTSASLICSRS
Trigger: GGAGCGGGAACAGATGAGTGAAGCAGAGGTGGGGGTGTTTGTCCAGCGACTCCGGGGCCTGATGAATGACATCGCTTCCTCGGCAGTCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371520.5
3UTR CCA 90 bp ACACCCAGATCCTCACCGATGTCATTCATCAGGCCCCGGAGTCGCTaGACAAACACCCCCACCTCTGCTTCACTCATCTGTTCCCGCTCC +
Preference number: 1 (lower is better)
Translates to: TPRSSPMSFIRPRSR*TNTPTSASLICSRS
Trigger: GGAGCGGGAACAGATGAGTGAAGCAGAGGTGGGGGTGTTTGTCCAGCGACTCCGGGGCCTGATGAATGACATCGGTGAGGATCTGGGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544365.5
3UTR GCA 90 bp CACCCCCACCTCTGCTTCACTCATCTGTTCCCGCTCCTTCAGGTCTaGACCTGCACAGAACACGCCCTTCACTCCACTTCTGAAGAGCAG +
Preference number: 1 (lower is better)
Translates to: HPHLCFTHLFPLLQV*TCTEHALHSTSEEQ
Trigger: CTGCTCTTCAGAAGTGGAGTGAAGGGCGTGTTCTGTGCAGGTGCAGACCTGAAGGAGCGGGAACAGATGAGTGAAGCAGAGGTGGGGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371520.5
ENST00000476477.6
ENST00000544365.5
3UTR GCA 90 bp CACCTCTGCTTCACTCATCTGTTCCCGCTCCTTCAGGTCTGCACCTaGACAGAACACGCCCTTCACTCCACTTCTGAAGAGCAGGACACG +
Preference number: 1 (lower is better)
Translates to: HLCFTHLFPLLQVCT*TEHALHSTSEEQDT
Trigger: CGTGTCCTGCTCTTCAGAAGTGGAGTGAAGGGCGTGTTCTGTGCAGGTGCAGACCTGAAGGAGCGGGAACAGATGAGTGAAGCAGAGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371520.5
ENST00000476477.6
ENST00000544365.5
3UTR CCA 90 bp CTCAAGGCCTGTCCTCATGGAACCTACAGCCTTCAAATGAGCCCATaGGTAGAGGAGGGAGGATGGAAAGGTCAGCTTGTGGTGGAGAAC +
Preference number: 1 (lower is better)
Translates to: LKACPHGTYSLQMSP*VEEGGWKGQLVVEN
Trigger: GTTCTCCACCACAAGCTGACCTTTCCATCCTCCCTCCTCTACCCATGGGCTCATTTGAAGGCTGTAGGTTCCATGAGGACAGGCCTTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542552.1
3UTR GCA 90 bp TCAGGATGGACATTTCAGGTCTTCCCAGGGCTGAAATCCAGCAGGTaGCCAGAGGAGTGTTTCCCAATCCTTTGGCCTTCAAAGACCCCT +
Preference number: 1 (lower is better)
Translates to: SGWTFQVFPGLKSSR*PEECFPILWPSKTP
Trigger: AGGGGTCTTTGAAGGCCAAAGGATTGGGAAACACTCCTCTGGGCACCTGCTGGATTTCAGCCCTGGGAAGACCTGAAATGTCCATCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476477.6
3UTR GCA 90 bp CTGGGGTTCGCTCTTGGTGGTGTACACTCTGTGGGTTTACACAGATaGATAATGACACGTATCTGCCTTGGCTTTGGCAGGCCCCCATTC +
Preference number: 1 (lower is better)
Translates to: LGFALGGVHSVGLHR*IMTRICLGFGRPPF
Trigger: GAATGGGGGCCTGCCAAAGCCAAGGCAGATACGTGTCATTATGCATCTGTGTAAACCCACAGAGTGTACACCACCAAGAGCGAACCCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542552.1
3UTR CCA 90 bp TCCCTCTCTGAGAGAACTGCCCTCGGTCATCCTCCTCCATCCCCCTaGGTGAGTCATCTGTCTTATCACAGAACTCCAAACAGAAAGAAG +
Preference number: 1 (lower is better)
Translates to: SLSERTALGHPPPSP*VSHLSYHRTPNRKK
Trigger: CTTCTTTCTGTTTGGAGTTCTGTGATAAGACAGATGACTCACCCAGGGGGATGGAGGAGGATGACCGAGGGCAGTTCTCTCAGAGAGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544365.5
3UTR GCA 90 bp GGTGTACACTCTGTGGGTTTACACAGATGCATAATGACACGTATCTaGCTTGGCTTTGGCAGGCCCCCATTCTCCTTCCTCCTACCTTTC +
Preference number: 1 (lower is better)
Translates to: GVHSVGLHRCIMTRI*LGFGRPPFSFLLPF
Trigger: GAAAGGTAGGAGGAAGGAGAATGGGGGCCTGCCAAAGCCAAGGCAGATACGTGTCATTATGCATCTGTGTAAACCCACAGAGTGTACACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542552.1
3UTR CCA 90 bp TGTGGGTTTACACAGATGCATAATGACACGTATCTGCCTTGGCTTTaGCAGGCCCCCATTCTCCTTCCTCCTACCTTTCAGGTGATGCCT +
Preference number: 1 (lower is better)
Translates to: CGFTQMHNDTYLPWL*QAPILLPPTFQVMP
Trigger: AGGCATCACCTGAAAGGTAGGAGGAAGGAGAATGGGGGCCTGCCAAAGCCAAGGCAGATACGTGTCATTATGCATCTGTGTAAACCCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542552.1
3UTR CCA 90 bp ACACTCTGTGGGTTTACACAGATGCATAATGACACGTATCTGCCTTaGCTTTGGCAGGCCCCCATTCTCCTTCCTCCTACCTTTCAGGTG +
Preference number: 1 (lower is better)
Translates to: TLCGFTQMHNDTYLP*LWQAPILLPPTFQV
Trigger: CACCTGAAAGGTAGGAGGAAGGAGAATGGGGGCCTGCCAAAGCCAAGGCAGATACGTGTCATTATGCATCTGTGTAAACCCACAGAGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542552.1
3UTR TCA 90 bp CACGGTTATACAGCAAGTAACTGGCAGAGACTGGGATCTGCAGTCTaGCCCCTGACACATGTTCAACCGATGTCAGAGTTTATTTATTAC +
Preference number: 1 (lower is better)
Translates to: HGYTASNWQRLGSAV*PLTHVQPMSEFIYY
Trigger: GTAATAAATAAACTCTGACATCGGTTGAACATGTGTCAGGGGTCAGACTGCAGATCCCAGTCTCTGCCAGTTACTTGCTGTATAACCGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371522.9
ENST00000536120.5
3UTR GCA 90 bp GGTATCTCAGGCAAAGGTAACAGCAATTGTCAAAACTTGAAAGCATaGTTGGGGAAACTTAACTGCTTTGGAATGGCCAGGCTTGAACCC +
Preference number: 1 (lower is better)
Translates to: GISGKGNSNCQNLKA*LGKLNCFGMARLEP
Trigger: GGGTTCAAGCCTGGCCATTCCAAAGCAGTTAAGTTTCCCCAAGCATGCTTTCAAGTTTTGACAATTGCTGTTACCTTTGCCTGAGATACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544365.5
3UTR TCA 90 bp ATACAGCAAGTAACTGGCAGAGACTGGGATCTGCAGTCTGACCCCTaGCACATGTTCAACCGATGTCAGAGTTTATTTATTACCTCTGTT +
Preference number: 1 (lower is better)
Translates to: IQQVTGRDWDLQSDP*HMFNRCQSLFITSV
Trigger: AACAGAGGTAATAAATAAACTCTGACATCGGTTGAACATGTGTCAGGGGTCAGACTGCAGATCCCAGTCTCTGCCAGTTACTTGCTGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371522.9
ENST00000536120.5
3UTR-3UTR GCA 90 bp CTCCTCGTTCTGGGCCACAGCGTGATTCACCAGCCCCAGTACGTGGGCCTCAGTCCTCTGAGTCCCTCCTaGCCCCGGGAGGAGCCCTCG +
Preference number: 2 (lower is better)
Translates to: LLVLGHSVIHQPQYVGLSPLSPS*PREEPS
Trigger: CGAGGGCTCCTCCCGGGGGCAGGAGGGACTCAGAGG...ACTGAGGCCCACGTACTGGGGCTGGTGAATCACGCTGTGGCCCAGAACGAGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371520.5
ENST00000476477.6
3UTR-3UTR CCA 90 bp CGTTCTGGGCCACAGCGTGATTCACCAGCCCCAGTACGTGGGCCTCAGTTCCACCGGTCCTCCCGCAGCTaGGCCAGAGTTTCCAGCAGC +
Preference number: 2 (lower is better)
Translates to: RSGPQRDSPAPVRGPQFHRSSRS*ARVSSS
Trigger: GCTGCTGGAAACTCTGGCCCAGCTGCGGGAGGACCG...GTGGAACTGAGGCCCACGTACTGGGGCTGGTGAATCACGCTGTGGCCCAGAACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371520.5
ENST00000476477.6
3UTR-3UTR CCA 90 bp CTCCTCGTTCTGGGCCACAGCGTGATTCACCAGCCCCAGTACGTGGGCCTCAGTCCACGGGAAAGCAGCTaGCTCTGCCTAATCCTGGGC +
Preference number: 2 (lower is better)
Translates to: LLVLGHSVIHQPQYVGLSPRESS*LCLILG
Trigger: GCCCAGGATTAGGCAGAGCCAGCTGCTTTCCCGTGG...ACTGAGGCCCACGTACTGGGGCTGGTGAATCACGCTGTGGCCCAGAACGAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371520.5
3UTR CAA 90 bp ACAGAACACGCCCTTCACTCCACTTCTGAAGAGCAGGACACGCACTaGCCGGTCCTCCCGCAGCTGGGCCAGAGTTTCCAGCAGCTCACT +
Preference number: 2 (lower is better)
Translates to: TEHALHSTSEEQDTH*PVLPQLGQSFQQLT
Trigger: AGTGAGCTGCTGGAAACTCTGGCCCAGCTGCGGGAGGACCGGCAAGTGCGTGTCCTGCTCTTCAGAAGTGGAGTGAAGGGCGTGTTCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371520.5
ENST00000476477.6
ENST00000544365.5
3UTR-3UTR GCA 90 bp GAAGGCAATCTGGCCACAAATCTTCCTTCTGGATCCTGCTCTTCAGGGCATGCACTGGGCCAGTGCTCGTaGCCGCTGGTAGGCGGCGTC +
Preference number: 2 (lower is better)
Translates to: EGNLATNLPSGSCSSGHALGQCS*PLVGGV
Trigger: GACGCCGCCTACCAGCGGGCACGAGCACTGGCCCAG...TGCATGCCCTGAAGAGCAGGATCCAGAAGGAAGATTTGTGGCCAGATTGCCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371520.5
ENST00000476477.6
3UTR-3UTR GCA 90 bp AGGACACGCACTTGCCGGTCCTCCCGCAGCTGGGCCAGAGTTTCCAGCAGCTCACTGAAATCCAGCAGGTaGCCAGAGGAGTGTTTCCCA +
Preference number: 2 (lower is better)
Translates to: RTRTCRSSRSWARVSSSSLKSSR*PEECFP
Trigger: TGGGAAACACTCCTCTGGGCACCTGCTGGATTTCAG...TGAGCTGCTGGAAACTCTGGCCCAGCTGCGGGAGGACCGGCAAGTGCGTGTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476477.6
3UTR-3UTR CCA 90 bp GGGACACAAAAGCTGAAGAGCCAGAACTCCCTCTCTGAGAGAACTGCCCTCGGTCGGTCCTCCCGCAGCTaGGCCAGAGTTTCCAGCAGC +
Preference number: 2 (lower is better)
Translates to: GTQKLKSQNSLSERTALGRSSRS*ARVSSS
Trigger: GCTGCTGGAAACTCTGGCCCAGCTGCGGGAGGACCG...ACCGAGGGCAGTTCTCTCAGAGAGGGAGTTCTGGCTCTTCAGCTTTTGTGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544365.5
3UTR-3UTR CCA 90 bp AGCAGGACACGCACTTGCCGGTCCTCCCGCAGCTGGGCCAGAGTTTCCAGCAGCCAAGGCCTGTCCTCATaGAACCTACAGCCCTTATCA +
Preference number: 2 (lower is better)
Translates to: SRTRTCRSSRSWARVSSSQGLSS*NLQPLS
Trigger: TGATAAGGGCTGTAGGTTCCATGAGGACAGGCCTTG...GCTGCTGGAAACTCTGGCCCAGCTGCGGGAGGACCGGCAAGTGCGTGTCCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476477.6
3UTR-3UTR TCA 90 bp GAAGAGCAGGACACGCACTTGCCGGTCCTCCCGCAGCTGGGCCAGAGTTTCCAGCAAACCCAACCCTCGTaGTTATTTCTAGCCAGGGTG +
Preference number: 2 (lower is better)
Translates to: EEQDTHLPVLPQLGQSFQQTQPS*LFLARV
Trigger: CACCCTGGCTAGAAATAATCACGAGGGTTGGGTTTG...CTGGAAACTCTGGCCCAGCTGCGGGAGGACCGGCAAGTGCGTGTCCTGCTCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371520.5
3UTR-3UTR GCA 90 bp GCAAACCCAACCCTCGTGATTATTTCTAGCCAGGGTGAAGCTAAGGAAGGTAGCCCTCTGAGTCCCTCCTaGCCCCGGGAGGAGCCCTCG +
Preference number: 2 (lower is better)
Translates to: ANPTLVIISSQGEAKEGSPLSPS*PREEPS
Trigger: CGAGGGCTCCTCCCGGGGGCAGGAGGGACTCAGAGG...GCTACCTTCCTTAGCTTCACCCTGGCTAGAAATAATCACGAGGGTTGGGTTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371520.5
3UTR-3UTR GCA 90 bp TTCACTCCACTTCTGAAGAGCAGGACACGCACTTGCCGGTCCTCCCGCAGCTGGCATTCCCCAAGGCATTaGGGGCAGAAGGTCTGTTCA +
Preference number: 2 (lower is better)
Translates to: FTPLLKSRTRTCRSSRSWHSPRH*GQKVCS
Trigger: TGAACAGACCTTCTGCCCGCAATGCCTTGGGGAATG...CCAGCTGCGGGAGGACCGGCAAGTGCGTGTCCTGCTCTTCAGAAGTGGAGTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371520.5
ENST00000476477.6
ENST00000544365.5
3UTR CAA 90 bp AGGCCTGGGATCTGGGGAGCCTCTGCCCTAGATGACCAGAGTGACTaGCCACAAGTCACACACTCAGGCAGGCCTCAATTTTCCCAACCA +
Preference number: 2 (lower is better)
Translates to: RPGIWGASALDDQSD*PQVTHSGRPQFSQP
Trigger: TGGTTGGGAAAATTGAGGCCTGCCTGAGTGTGTGACTTGTGGCAAGTCACTCTGGTCATCTAGGGCAGAGGCTCCCCAGATCCCAGGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371520.5
3UTR-3UTR GCA 90 bp CGGTCCTCCCGCAGCTGGGCCAGAGTTTCCAGCAGCTCACTGACGAAGACATTCCTTCCTTCTGGATCCTaGTCTTCAGGGCATGCATCT +
Preference number: 2 (lower is better)
Translates to: RSSRSWARVSSSSLTKTFLPSGS*SSGHAS
Trigger: AGATGCATGCCCTGAAGAGCAGGATCCAGAAGGAAG...GAATGTCTTCGTCAGTGAGCTGCTGGAAACTCTGGCCCAGCTGCGGGAGGACCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371520.5
ENST00000476477.6
3UTR-3UTR TCA 90 bp AGGAGGCCTGGGATCTGGGGAGCCTCTGCCCTAGATGACCAGAGTGACTTGCCACCATCATCATCCTTGTaGAGAAATGGAAGTCTGGAG +
Preference number: 2 (lower is better)
Translates to: RRPGIWGASALDDQSDLPPSSSL*RNGSLE
Trigger: CTCCAGACTTCCATTTCTTCACAAGGATGATGATGG...TGGCAAGTCACTCTGGTCATCTAGGGCAGAGGCTCCCCAGATCCCAGGCCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371520.5
3UTR-3UTR TCA 90 bp GCAAACCCAACCCTCGTGATTATTTCTAGCCAGGGTGAAGCTAAGGAAGGTAGCGAGTCCGCTTCTCCCTaGAGGCTGCCATGCCCTCTA +
Preference number: 2 (lower is better)
Translates to: ANPTLVIISSQGEAKEGSESASP*RLPCPL
Trigger: TAGAGGGCATGGCAGCCTTCAGGGAGAAGCGGACTC...GCTACCTTCCTTAGCTTCACCCTGGCTAGAAATAATCACGAGGGTTGGGTTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371520.5
3UTR-3UTR TCA 90 bp CAGATCCTCACCGATGTCATTCATCAGGCCCCGGAGTCGCTGGACAAACACCCCTCATCAGAATCTCAGTaGTCCCTTTCAGGTGATGCC +
Preference number: 2 (lower is better)
Translates to: QILTDVIHQAPESLDKHPSSESQ*SLSGDA
Trigger: GGCATCACCTGAAAGGGATCACTGAGATTCTGATGA...GGGGTGTTTGTCCAGCGACTCCGGGGCCTGATGAATGACATCGGTGAGGATCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544365.5
3UTR-3UTR CCA 90 bp CATTCATCAGGCCCCGGAGTCGCTGGACAAACACCCCCACCTCTGCTTCACTCACACAAATCTTCCTTCTaGATCCTGCTCTTCAGGGCA +
Preference number: 2 (lower is better)
Translates to: HSSGPGVAGQTPPPLLHSHKSSF*ILLFRA
Trigger: TGCCCTGAAGAGCAGGATCCAGAAGGAAGATTTGTG...TGAGTGAAGCAGAGGTGGGGGTGTTTGTCCAGCGACTCCGGGGCCTGATGAATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371520.5
ENST00000476477.6
3UTR-3UTR GCA 90 bp CCACAGCGTGATTCACCAGCCCCAGTACGTGGGCCTCAGTTCCACTCAGTCGTCTATATATTTGCTGTGTaGTGGCCTCTACTAGACACC +
Preference number: 2 (lower is better)
Translates to: PQRDSPAPVRGPQFHSVVYIFAV*WPLLDT
Trigger: GGTGTCTAGTAGAGGCCAGCACACAGCAAATATATA...GACGACTGAGTGGAACTGAGGCCCACGTACTGGGGCTGGTGAATCACGCTGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371520.5
ENST00000476477.6
3UTR CAA 90 bp GCCAGAGTTTCCAGCAGCTCACTGACGAAGACATTCCCCAAGGCATaGCGGGCAGAAGGTCTGTTCATCAGAATCTCAGTGATCCCTGTA +
Preference number: 2 (lower is better)
Translates to: ARVSSSSLTKTFPKA*RAEGLFIRISVIPV
Trigger: TACAGGGATCACTGAGATTCTGATGAACAGACCTTCTGCCCGCAATGCCTTGGGGAATGTCTTCGTCAGTGAGCTGCTGGAAACTCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371520.5
3UTR CAA 90 bp GCCAGAGTTTCCAGCAGCTCACTGACGAAGACATTCCCCAAGGCATaGCGGGCAGAAGGTCTGTTCATCAGAATCTCAGTGATCCCTTTC +
Preference number: 2 (lower is better)
Translates to: ARVSSSSLTKTFPKA*RAEGLFIRISVIPF
Trigger: GAAAGGGATCACTGAGATTCTGATGAACAGACCTTCTGCCCGCAATGCCTTGGGGAATGTCTTCGTCAGTGAGCTGCTGGAAACTCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476477.6
ENST00000544365.5
3UTR-3UTR CCA 90 bp CAGATGCATAATGACACGTATCTGCCTTGGCTTTGGCAGGCCCCCATTCTCCTTCTTCAAATGAGCCCATaGGTAGAGGAGGGAGGATGG +
Preference number: 2 (lower is better)
Translates to: QMHNDTYLPWLWQAPILLLQMSP*VEEGGW
Trigger: CCATCCTCCCTCCTCTACCCATGGGCTCATTTGAAG...AAGGAGAATGGGGGCCTGCCAAAGCCAAGGCAGATACGTGTCATTATGCATCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542552.1
3UTR-3UTR TCA 90 bp GAAGGCAATCTGGCCACAAATCTTCCTTCTGGATCCTGCTCTTCAGGGCATGCACAAACCCAACCCTCGTaGTTATTTCTAGCCAGGGTG +
Preference number: 2 (lower is better)
Translates to: EGNLATNLPSGSCSSGHAQTQPS*LFLARV
Trigger: CACCCTGGCTAGAAATAATCACGAGGGTTGGGTTTG...TGCATGCCCTGAAGAGCAGGATCCAGAAGGAAGATTTGTGGCCAGATTGCCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358358.9
ENST00000371520.5
ENST00000371522.9
ENST00000536120.5
3UTR-3UTR CCA 90 bp CAGGACAGACTCAAGGCCTGTCCTCATGGAACCTACAGCCCTTATCATCCCTTCCACAAATCTTCCTTCTaGATCCTGCTCTTCAGGGCA +
Preference number: 2 (lower is better)
Translates to: QDRLKACPHGTYSPYHPFHKSSF*ILLFRA
Trigger: TGCCCTGAAGAGCAGGATCCAGAAGGAAGATTTGTG...GAAGGGATGATAAGGGCTGTAGGTTCCATGAGGACAGGCCTTGAGTCTGTCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476477.6
3UTR-3UTR CCA 90 bp GAACACGCCCTTCACTCCACTTCTGAAGAGCAGGACACGCACTTGCCGGTCCTCATCCTTGTGAAGAAATaGAAGTCTGGAGAGGTGAAA +
Preference number: 2 (lower is better)
Translates to: EHALHSTSEEQDTHLPVLILVKK*KSGEVK
Trigger: TTTCACCTCTCCAGACTTCCATTTCTTCACAAGGAT...GAGGACCGGCAAGTGCGTGTCCTGCTCTTCAGAAGTGGAGTGAAGGGCGTGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371520.5
3UTR-3UTR CCA 90 bp CCGCTCCTTCAGGTCTGCACCTGCACAGAACACGCCCTTCACTCCACTTCTGAATGTTTCCCAATCCTTTaGCCTTCAAAGACCCCTTAT +
Preference number: 2 (lower is better)
Translates to: PLLQVCTCTEHALHSTSECFPIL*PSKTPY
Trigger: ATAAGGGGTCTTTGAAGGCCAAAGGATTGGGAAACA...TTCAGAAGTGGAGTGAAGGGCGTGTTCTGTGCAGGTGCAGACCTGAAGGAGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476477.6
3UTR-3UTR GCA 90 bp GCAAACCCAACCCTCGTGATTATTTCTAGCCAGGGTGAAGCTAAGGAAGGTAGCCTTCCTTCTGGATCCTaGTCTTCAGGGCATGCATCT +
Preference number: 2 (lower is better)
Translates to: ANPTLVIISSQGEAKEGSLPSGS*SSGHAS
Trigger: AGATGCATGCCCTGAAGAGCAGGATCCAGAAGGAAG...GCTACCTTCCTTAGCTTCACCCTGGCTAGAAATAATCACGAGGGTTGGGTTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358358.9
ENST00000371520.5
ENST00000371522.9
ENST00000536120.5
3UTR-3UTR GCA 90 bp CAGAGTTTCCAGCAGCTCACTGACGAAGACATTCCCCAAGGCATTGCGGGCAGATATATATTTGCTGTGTaGTGGCCTCTACTAGACACC +
Preference number: 2 (lower is better)
Translates to: QSFQQLTDEDIPQGIAGRYIFAV*WPLLDT
Trigger: GGTGTCTAGTAGAGGCCAGCACACAGCAAATATATA...TCTGCCCGCAATGCCTTGGGGAATGTCTTCGTCAGTGAGCTGCTGGAAACTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371520.5
ENST00000476477.6
ENST00000544365.5
3UTR-3UTR CCA 90 bp TGCACAGAACACGCCCTTCACTCCACTTCTGAAGAGCAGGACACGCACTTGCCGTTCCCAACCATAAAATaGAGAGAAAAACCCTTGCTC +
Preference number: 2 (lower is better)
Translates to: CTEHALHSTSEEQDTHLPFPTIK*REKPLL
Trigger: GAGCAAGGGTTTTTCTCTCCATTTTATGGTTGGGAA...CGGCAAGTGCGTGTCCTGCTCTTCAGAAGTGGAGTGAAGGGCGTGTTCTGTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371520.5
3UTR-3UTR TCA 90 bp AACAATTTGTCCACGGTTATACAGCAAGTAACTGGCAGAGACTGGGATCTGCAGGGGGCTGAGAGCCAATaGTACCAAGACTCAGAGAGA +
Preference number: 2 (lower is better)
Translates to: NNLSTVIQQVTGRDWDLQGAESQ*YQDSER
Trigger: TCTCTCTGAGTCTTGGTATCATTGGCTCTCAGCCCC...CTGCAGATCCCAGTCTCTGCCAGTTACTTGCTGTATAACCGTGGACAAATTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371522.9
ENST00000536120.5
3UTR-3UTR GCA 90 bp ACAGAACACGCCCTTCACTCCACTTCTGAAGAGCAGGACACGCACTTGCCGGTCCCCAATTATTTTAAGTaGGTAAGTTCCTTAAGGCCA +
Preference number: 2 (lower is better)
Translates to: TEHALHSTSEEQDTHLPVPNYFK*VSSLRP
Trigger: TGGCCTTAAGGAACTTACGCACTTAAAATAATTGGG...GACCGGCAAGTGCGTGTCCTGCTCTTCAGAAGTGGAGTGAAGGGCGTGTTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371520.5
ENST00000476477.6
ENST00000544365.5
3UTR-3UTR CCA 90 bp TACACTGGGGTTCGCTCTTGGTGGTGTACACTCTGTGGGTTTACACAGATGCATCAAGGCCTGTCCTCATaGAACCTACAGCCTTCAAAT +
Preference number: 2 (lower is better)
Translates to: YTGVRSWWCTLCGFTQMHQGLSS*NLQPSN
Trigger: ATTTGAAGGCTGTAGGTTCCATGAGGACAGGCCTTG...ATGCATCTGTGTAAACCCACAGAGTGTACACCACCAAGAGCGAACCCCAGTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542552.1
3UTR-3UTR TCA 90 bp GCAAACCCAACCCTCGTGATTATTTCTAGCCAGGGTGAAGCTAAGGAAGGTAGCCCATCATCATCCTTGTaGAGAAATGGAAGTCTGGAG +
Preference number: 2 (lower is better)
Translates to: ANPTLVIISSQGEAKEGSPSSSL*RNGSLE
Trigger: CTCCAGACTTCCATTTCTTCACAAGGATGATGATGG...GCTACCTTCCTTAGCTTCACCCTGGCTAGAAATAATCACGAGGGTTGGGTTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358358.9
ENST00000371520.5
ENST00000371522.9
ENST00000536120.5
3UTR-3UTR GCA 90 bp AACAATTTGTCCACGGTTATACAGCAAGTAACTGGCAGAGACTGGGATCTGCAGCTTCCTTCTGGATCCTaGTCTTCAGGGCATGCATCT +
Preference number: 2 (lower is better)
Translates to: NNLSTVIQQVTGRDWDLQLPSGS*SSGHAS
Trigger: AGATGCATGCCCTGAAGAGCAGGATCCAGAAGGAAG...CTGCAGATCCCAGTCTCTGCCAGTTACTTGCTGTATAACCGTGGACAAATTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371522.9
ENST00000536120.5
3UTR-3UTR GCA 90 bp AAAGCAAACCCAACCCTCGTGATTATTTCTAGCCAGGGTGAAGCTAAGGAAGGTCTTCCTTCTGGATCCTaGTCTTCAGGGCATGCATCT +
Preference number: 2 (lower is better)
Translates to: KANPTLVIISSQGEAKEGLPSGS*SSGHAS
Trigger: AGATGCATGCCCTGAAGAGCAGGATCCAGAAGGAAG...ACCTTCCTTAGCTTCACCCTGGCTAGAAATAATCACGAGGGTTGGGTTTGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358358.9
ENST00000371520.5
ENST00000371522.9
ENST00000536120.5
3UTR-3UTR GCA 90 bp GAAGGCAATCTGGCCACAAATCTTCCTTCTGGATCCTGCTCTTCAGGGCATGCATATATATTTGCTGTGTaGTGGCCTCTACTAGACACC +
Preference number: 2 (lower is better)
Translates to: EGNLATNLPSGSCSSGHAYIFAV*WPLLDT
Trigger: GGTGTCTAGTAGAGGCCAGCACACAGCAAATATATA...TGCATGCCCTGAAGAGCAGGATCCAGAAGGAAGATTTGTGGCCAGATTGCCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371520.5
ENST00000476477.6
3UTR-3UTR GCA 90 bp ATTTGCTGTGTGCTGGCCTCTACTAGACACCGTGATTCCAGAGACCAGGACAGATATATATTTGCTGTGTaGTGGCCTCTACTAGACACC +
Preference number: 2 (lower is better)
Translates to: ICCVLASTRHRDSRDQDRYIFAV*WPLLDT
Trigger: GGTGTCTAGTAGAGGCCAGCACACAGCAAATATATA...TCTGTCCTGGTCTCTGGAATCACGGTGTCTAGTAGAGGCCAGCACACAGCAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371520.5
ENST00000476477.6
ENST00000542552.1
ENST00000544365.5
3UTR-3UTR GCA 90 bp AGCAGCTCACTGACGAAGACATTCCCCAAGGCATTGCGGGCAGAAGGTCTGTTCCCCAATTATTTTAAGTaGGTAAGTTCCTTAAGGCCA +
Preference number: 2 (lower is better)
Translates to: SSSLTKTFPKALRAEGLFPNYFK*VSSLRP
Trigger: TGGCCTTAAGGAACTTACGCACTTAAAATAATTGGG...GAACAGACCTTCTGCCCGCAATGCCTTGGGGAATGTCTTCGTCAGTGAGCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000371520.5
ENST00000476477.6
ENST00000544365.5
3UTR-3UTR CCA 90 bp GAAGGCAATCTGGCCACAAATCTTCCTTCTGGATCCTGCTCTTCAGGGCATGCAATGATGAAGGCAATCTaGCCACAAATCTTCCTTCTG +
Preference number: 2 (lower is better)
Translates to: EGNLATNLPSGSCSSGHAMMKAI*PQIFLL
Trigger: CAGAAGGAAGATTTGTGGCCAGATTGCCTTCATCAT...TGCATGCCCTGAAGAGCAGGATCCAGAAGGAAGATTTGTGGCCAGATTGCCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358358.9
ENST00000371520.5
ENST00000371522.9
ENST00000476477.6
ENST00000536120.5
3UTR-3UTR CCA 90 bp AAAGCAAACCCAACCCTCGTGATTATTTCTAGCCAGGGTGAAGCTAAGGAAGGTCACAAATCTTCCTTCTaGATCCTGCTCTTCAGGGCA +
Preference number: 2 (lower is better)
Translates to: KANPTLVIISSQGEAKEGHKSSF*ILLFRA
Trigger: TGCCCTGAAGAGCAGGATCCAGAAGGAAGATTTGTG...ACCTTCCTTAGCTTCACCCTGGCTAGAAATAATCACGAGGGTTGGGTTTGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358358.9
ENST00000371520.5
ENST00000371522.9
ENST00000536120.5
3UTR-3UTR CCA 90 bp TCCAAAGCAAACCCAACCCTCGTGATTATTTCTAGCCAGGGTGAAGCTAAGGAACACAAATCTTCCTTCTaGATCCTGCTCTTCAGGGCA +
Preference number: 2 (lower is better)
Translates to: SKANPTLVIISSQGEAKEHKSSF*ILLFRA
Trigger: TGCCCTGAAGAGCAGGATCCAGAAGGAAGATTTGTG...TTCCTTAGCTTCACCCTGGCTAGAAATAATCACGAGGGTTGGGTTTGCTTTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358358.9
ENST00000371520.5
ENST00000371522.9
ENST00000536120.5
3UTR-3UTR GCA 90 bp CAGTCATTTTATTTCCATCATCATCCTTGTGAAGAAATGGAAGTCTGGAGAGGTGCAGAGACTGGGATCTaGAGTCTGACCCCTGACACA +
Preference number: 2 (lower is better)
Translates to: QSFYFHHHPCEEMEVWRGAETGI*SLTPDT
Trigger: TGTGTCAGGGGTCAGACTGCAGATCCCAGTCTCTGC...ACCTCTCCAGACTTCCATTTCTTCACAAGGATGATGATGGAAATAAAATGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371522.9
ENST00000536120.5
3UTR-3UTR GCA 90 bp AGATGCATAATGACACGTATCTGCCTTGGCTTTGGCAGGCCCCCATTCTCCTTCCCCAATTATTTTAAGTaGGTAAGTTCCTTAAGGCCA +
Preference number: 2 (lower is better)
Translates to: RCIMTRICLGFGRPPFSFPNYFK*VSSLRP
Trigger: TGGCCTTAAGGAACTTACGCACTTAAAATAATTGGG...GAAGGAGAATGGGGGCCTGCCAAAGCCAAGGCAGATACGTGTCATTATGCATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000542552.1
3UTR-3UTR CCA 90 bp GCAAACCCAACCCTCGTGATTATTTCTAGCCAGGGTGAAGCTAAGGAAGGTAGCATCCTTGTGAAGAAATaGAAGTCTGGAGAGGTGAAA +
Preference number: 2 (lower is better)
Translates to: ANPTLVIISSQGEAKEGSILVKK*KSGEVK
Trigger: TTTCACCTCTCCAGACTTCCATTTCTTCACAAGGAT...GCTACCTTCCTTAGCTTCACCCTGGCTAGAAATAATCACGAGGGTTGGGTTTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358358.9
ENST00000371520.5
ENST00000371522.9
ENST00000536120.5
3UTR-3UTR CCA 90 bp CAGTCATTTTATTTCCATCATCATCCTTGTGAAGAAATGGAAGTCTGGAGAGGTGTAACTGGCAGAGACTaGGATCTGCAGTCTGACCCC +
Preference number: 2 (lower is better)
Translates to: QSFYFHHHPCEEMEVWRGVTGRD*DLQSDP
Trigger: GGGGTCAGACTGCAGATCCCAGTCTCTGCCAGTTAC...ACCTCTCCAGACTTCCATTTCTTCACAAGGATGATGATGGAAATAAAATGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371522.9
ENST00000536120.5
3UTR-3UTR CCA 90 bp AGGACAAGTAAAAGTTCAAGTAACCAAGAAGGGGTATCTCAGGCAAAGGTAACACCTCCTCCATCCCCCTaGGTGAGTCATCTGTCTTAT +
Preference number: 2 (lower is better)
Translates to: RTSKSSSNQEGVSQAKVTPPPSP*VSHLSY
Trigger: ATAAGACAGATGACTCACCCAGGGGGATGGAGGAGG...TGTTACCTTTGCCTGAGATACCCCTTCTTGGTTACTTGAACTTTTACTTGTCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000544365.5
3UTR-3UTR GCA 90 bp TTGTACATTTATATATTTGCTGTGTGCTGGCCTCTACTAGACACCGTGATTCCACTTCCTTCTGGATCCTaGTCTTCAGGGCATGCATCT +
Preference number: 2 (lower is better)
Translates to: LYIYIFAVCWPLLDTVIPLPSGS*SSGHAS
Trigger: AGATGCATGCCCTGAAGAGCAGGATCCAGAAGGAAG...TGGAATCACGGTGTCTAGTAGAGGCCAGCACACAGCAAATATATAAATGTACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371520.5
ENST00000476477.6
3UTR-3UTR GCA 90 bp AACAATTTGTCCACGGTTATACAGCAAGTAACTGGCAGAGACTGGGATCTGCAGGACATCTCTAATGAGTaGCTGATAACTGAGAGAGGT +
Preference number: 2 (lower is better)
Translates to: NNLSTVIQQVTGRDWDLQDISNE*LITERG
Trigger: ACCTCTCTCAGTTATCAGGCACTCATTAGAGATGTC...CTGCAGATCCCAGTCTCTGCCAGTTACTTGCTGTATAACCGTGGACAAATTGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371522.9
ENST00000536120.5
3UTR-3UTR CCA 90 bp AAAGCAAACCCAACCCTCGTGATTATTTCTAGCCAGGGTGAAGCTAAGGAAGGTATCCTTGTGAAGAAATaGAAGTCTGGAGAGGTGAAA +
Preference number: 2 (lower is better)
Translates to: KANPTLVIISSQGEAKEGILVKK*KSGEVK
Trigger: TTTCACCTCTCCAGACTTCCATTTCTTCACAAGGAT...ACCTTCCTTAGCTTCACCCTGGCTAGAAATAATCACGAGGGTTGGGTTTGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358358.9
ENST00000371520.5
ENST00000371522.9
ENST00000536120.5
3UTR-3UTR CCA 90 bp AGGACAAGTAAAAGTTCAAGTAACCAAGAAGGGGTATCTCAGGCAAAGGTAACATTAACTGCTTTGGAATaGCCAGGCTTGAACCCTGAG +
Preference number: 2 (lower is better)
Translates to: RTSKSSSNQEGVSQAKVTLTALE*PGLNPE
Trigger: CTCAGGGTTCAAGCCTGGCCATTCCAAAGCAGTTAA...TGTTACCTTTGCCTGAGATACCCCTTCTTGGTTACTTGAACTTTTACTTGTCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544365.5
3UTR-3UTR GCA 90 bp AGGACAAGTAAAAGTTCAAGTAACCAAGAAGGGGTATCTCAGGCAAAGGTAACATCTGCACTCCTTCACTaGTTCTCTTCTGCCCAATTA +
Preference number: 2 (lower is better)
Translates to: RTSKSSSNQEGVSQAKVTSALLH*FSSAQL
Trigger: TAATTGGGCAGAAGAGAAGCAGTGAAGGAGTGCAGA...TGTTACCTTTGCCTGAGATACCCCTTCTTGGTTACTTGAACTTTTACTTGTCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544365.5
3UTR-3UTR CCA 90 bp TTAGGGTCACAGCAAAATGGAGTGGAAAATACAATTCAATACAGTTCACCTATAGTAGAGGAGGGAGGATaGAAAGGTCAGCTTGTGGTG +
Preference number: 2 (lower is better)
Translates to: LGSQQNGVENTIQYSSPIVEEGG*KGQLVV
Trigger: CACCACAAGCTGACCTTTCCATCCTCCCTCCTCTAC...TATAGGTGAACTGTATTGAATTGTATTTTCCACTCCATTTTGCTGTGACCCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542552.1
3UTR-3UTR CCA 90 bp CAGTCATTTTATTTCCATCATCATCCTTGTGAAGAAATGGAAGTCTGGAGAGGTTATACAGCAAGTAACTaGCAGAGACTGGGATCTGCA +
Preference number: 2 (lower is better)
Translates to: QSFYFHHHPCEEMEVWRGYTASN*QRLGSA
Trigger: TGCAGATCCCAGTCTCTGCCAGTTACTTGCTGTATA...ACCTCTCCAGACTTCCATTTCTTCACAAGGATGATGATGGAAATAAAATGACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371522.9
ENST00000536120.5
3UTR-3UTR CCA 90 bp TTTAAACAATTTGTCCACGGTTATACAGCAAGTAACTGGCAGAGACTGGGATCTATCCTTGTGAAGAAATaGAAGTCTGGAGAGGTGAAA +
Preference number: 2 (lower is better)
Translates to: FKQFVHGYTASNWQRLGSILVKK*KSGEVK
Trigger: TTTCACCTCTCCAGACTTCCATTTCTTCACAAGGAT...AGATCCCAGTCTCTGCCAGTTACTTGCTGTATAACCGTGGACAAATTGTTTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371522.9
ENST00000536120.5
3UTR TCA 72 bp CTGCACCTGCACAGAACACGCCCTTCACTCCACTTCTaGAGAGCAGGACACGCACTTGCCGGTCCTCCCGCA +
Preference number: 3 (lower is better)
Translates to: LHLHRTRPSLHF*RAGHALAGPPA
Trigger: TGCGGGAGGACCGGCAAGTGCGTGTCCTGCTCTTCAGAAGTGGAGTGAAGGGCGTGTTCTGTGCAGGTGCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371520.5
ENST00000476477.6
ENST00000544365.5
3UTR TCA 72 bp CAATCCCCATCCCCCACCAGAGGCACGTGTTGCAACTaGCGAACCTACACTGATGCACTGTCGCCACCCGGG +
Preference number: 3 (lower is better)
Translates to: QSPSPTRGTCCN*RTYTDALSPPG
Trigger: CCCGGGTGGCGACAGTGCATCAGTGTAGGTTCGTCAGTTGCAACACGTGCCTCTGGTGGGGGATGGGGATTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542552.1
3UTR CCA 72 bp AAGAGCAGGACACGCACTTGCCGGTCCTCCCGCAGCTaGGCCAGAGTTTCCAGCAGCTCACTGACGAAGACA +
Preference number: 3 (lower is better)
Translates to: KSRTRTCRSSRS*ARVSSSSLTKT
Trigger: TGTCTTCGTCAGTGAGCTGCTGGAAACTCTGGCCCAGCTGCGGGAGGACCGGCAAGTGCGTGTCCTGCTCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371520.5
ENST00000476477.6
ENST00000544365.5
3UTR TCA 72 bp CGGGACACAAAAGCTGAAGAGCCAGAACTCCCTCTCTaGGAGAACTGCCCTCGGTCATCCTCCTCCATCCCC +
Preference number: 3 (lower is better)
Translates to: RDTKAEEPELPL*ENCPRSSSSIP
Trigger: GGGGATGGAGGAGGATGACCGAGGGCAGTTCTCTCAGAGAGGGAGTTCTGGCTCTTCAGCTTTTGTGTCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544365.5
3UTR CCA 72 bp CACCCGGGGGCCCTAGTGTACACTGGGGTTCGCTCTTaGTGGTGTACACTCTGTGGGTTTACACAGATGCAT +
Preference number: 3 (lower is better)
Translates to: HPGALVYTGVRS*WCTLCGFTQMH
Trigger: ATGCATCTGTGTAAACCCACAGAGTGTACACCACCAAGAGCGAACCCCAGTGTACACTAGGGCCCCCGGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542552.1
3UTR-3UTR CAA 90 bp GGGACACAAAAGCTGAAGAGCCAGAACTCCCTCTCTGAGAGAACTGCCCTCGGTACATTCCCCAAGGCATaGCGGGCAGAAGGTCTGTTC +
Preference number: 3 (lower is better)
Translates to: GTQKLKSQNSLSERTALGTFPKA*RAEGLF
Trigger: GAACAGACCTTCTGCCCGCAATGCCTTGGGGAATGT...ACCGAGGGCAGTTCTCTCAGAGAGGGAGTTCTGGCTCTTCAGCTTTTGTGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544365.5
3UTR GCA 72 bp CTCTGCTTCACTCATCTGTTCCCGCTCCTTCAGGTCTaGACCTGCACAGAACACGCCCTTCACTCCACTTCT +
Preference number: 3 (lower is better)
Translates to: LCFTHLFPLLQV*TCTEHALHSTS
Trigger: AGAAGTGGAGTGAAGGGCGTGTTCTGTGCAGGTGCAGACCTGAAGGAGCGGGAACAGATGAGTGAAGCAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371520.5
ENST00000476477.6
ENST00000544365.5
3UTR GCA 72 bp TTCACTCATCTGTTCCCGCTCCTTCAGGTCTGCACCTaGACAGAACACGCCCTTCACTCCACTTCTGAAGAG +
Preference number: 3 (lower is better)
Translates to: FTHLFPLLQVCT*TEHALHSTSEE
Trigger: CTCTTCAGAAGTGGAGTGAAGGGCGTGTTCTGTGCAGGTGCAGACCTGAAGGAGCGGGAACAGATGAGTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371520.5
ENST00000476477.6
ENST00000544365.5
3UTR CCA 72 bp CCGGGGGCCCTAGTGTACACTGGGGTTCGCTCTTGGTaGTGTACACTCTGTGGGTTTACACAGATGCATAAT +
Preference number: 3 (lower is better)
Translates to: PGALVYTGVRSW*CTLCGFTQMHN
Trigger: ATTATGCATCTGTGTAAACCCACAGAGTGTACACCACCAAGAGCGAACCCCAGTGTACACTAGGGCCCCCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542552.1
3UTR-3UTR CAA 90 bp TCCTTCAGGTCTGCACCTGCACAGAACACGCCCTTCACTCCACTTCTGAAGAGCGATGACCAGAGTGACTaGCCACAAGTCACACACTCA +
Preference number: 3 (lower is better)
Translates to: SFRSAPAQNTPFTPLLKSDDQSD*PQVTHS
Trigger: TGAGTGTGTGACTTGTGGCAAGTCACTCTGGTCATC...GCTCTTCAGAAGTGGAGTGAAGGGCGTGTTCTGTGCAGGTGCAGACCTGAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371520.5
3UTR CCA 72 bp TTCCAGAGACCAGGACAGACTCAAGGCCTGTCCTCATaGAACCTACAGCCCTTATCATCCCTTCTAGGCTGT +
Preference number: 3 (lower is better)
Translates to: FQRPGQTQGLSS*NLQPLSSLLGC
Trigger: ACAGCCTAGAAGGGATGATAAGGGCTGTAGGTTCCATGAGGACAGGCCTTGAGTCTGTCCTGGTCTCTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476477.6
3UTR CCA 72 bp GGGTTTACACAGATGCATAATGACACGTATCTGCCTTaGCTTTGGCAGGCCCCCATTCTCCTTCCTCCTACC +
Preference number: 3 (lower is better)
Translates to: GFTQMHNDTYLP*LWQAPILLPPT
Trigger: GGTAGGAGGAAGGAGAATGGGGGCCTGCCAAAGCCAAGGCAGATACGTGTCATTATGCATCTGTGTAAACCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542552.1
3UTR GCA 72 bp TCTGTGGGTTTACACAGATGCATAATGACACGTATCTaGCTTGGCTTTGGCAGGCCCCCATTCTCCTTCCTC +
Preference number: 3 (lower is better)
Translates to: SVGLHRCIMTRI*LGFGRPPFSFL
Trigger: GAGGAAGGAGAATGGGGGCCTGCCAAAGCCAAGGCAGATACGTGTCATTATGCATCTGTGTAAACCCACAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542552.1
3UTR CCA 72 bp ACACAGATGCATAATGACACGTATCTGCCTTGGCTTTaGCAGGCCCCCATTCTCCTTCCTCCTACCTTTCAG +
Preference number: 3 (lower is better)
Translates to: TQMHNDTYLPWL*QAPILLPPTFQ
Trigger: CTGAAAGGTAGGAGGAAGGAGAATGGGGGCCTGCCAAAGCCAAGGCAGATACGTGTCATTATGCATCTGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542552.1
3UTR TCA 72 bp ACAGCAAGTAACTGGCAGAGACTGGGATCTGCAGTCTaGCCCCTGACACATGTTCAACCGATGTCAGAGTTT +
Preference number: 3 (lower is better)
Translates to: TASNWQRLGSAV*PLTHVQPMSEF
Trigger: AAACTCTGACATCGGTTGAACATGTGTCAGGGGTCAGACTGCAGATCCCAGTCTCTGCCAGTTACTTGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371522.9
ENST00000536120.5
3UTR TCA 72 bp GTATCTCAGGCAAAGGTAACAGCAATTGTCAAAACTTaGAAGCATGCTTGGGGAAACTTAACTGCTTTGGAA +
Preference number: 3 (lower is better)
Translates to: VSQAKVTAIVKT*KHAWGNLTALE
Trigger: TTCCAAAGCAGTTAAGTTTCCCCAAGCATGCTTTCAAGTTTTGACAATTGCTGTTACCTTTGCCTGAGATAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544365.5
CDS-3UTR CCA 90 bp AGCAGGACACGCACTTGCCGGTCCTCCCGCAGCTGGGCCAGAGTTTCCAGCAGCGCCAGGGCGCGCACTTaGATCTCTGAGCCCCCGGCC +
Preference number: 4 (lower is better)
Translates to: SRTRTCRSSRSWARVSSSARART*ISEPPA
Trigger: GGCCGGGGGCTCAGAGATCCAAGTGCGCGCCCTGGC...GCTGCTGGAAACTCTGGCCCAGCTGCGGGAGGACCGGCAAGTGCGTGTCCTGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000371520.5
ENST00000476477.6
ENST00000544365.5
CDS-3UTR GCA 90 bp GAAGAGCAGGACACGCACTTGCCGGTCCTCCCGCAGCTGGGCCAGAGTTTCCAGCTGCCGGTCCCCCGCTaGCTCCGGCCTAGTCCCAGT +
Preference number: 4 (lower is better)
Translates to: EEQDTHLPVLPQLGQSFQLPVPR*LRPSPS
Trigger: ACTGGGACTAGGCCGGAGGCAGCGGGGGACCGGCAG...CTGGAAACTCTGGCCCAGCTGCGGGAGGACCGGCAAGTGCGTGTCCTGCTCTTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371520.5
CDS-3UTR CCA 90 bp CCACTTCTGAAGAGCAGGACACGCACTTGCCGGTCCTCCCGCAGCTGGGCCAGATCCTGGGCTGCGGGCTaGGGACTGGAGGCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: PLLKSRTRTCRSSRSWARSWAAG*GLEAGG
Trigger: GCCTCCTGCCTCCAGTCCCCAGCCCGCAGCCCAGGA...TCTGGCCCAGCTGCGGGAGGACCGGCAAGTGCGTGTCCTGCTCTTCAGAAGTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371520.5
CDS-3UTR TCA 90 bp TTCACTCCACTTCTGAAGAGCAGGACACGCACTTGCCGGTCCTCCCGCAGCTGGCGTCTCGGCTCCCGCTaGGAGCTCGCAGTTCCGGCG +
Preference number: 4 (lower is better)
Translates to: FTPLLKSRTRTCRSSRSWRLGSR*ELAVPA
Trigger: CGCCGGAACTGCGAGCTCTCAGCGGGAGCCGAGACG...CCAGCTGCGGGAGGACCGGCAAGTGCGTGTCCTGCTCTTCAGAAGTGGAGTGAA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476477.6
ENST00000544365.5
CDS-3UTR GCA 90 bp CTCCTCGTTCTGGGCCACAGCGTGATTCACCAGCCCCAGTACGTGGGCCTCAGTGTGCTTCTCCGGCCCTaGACCGTCTCGGCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: LLVLGHSVIHQPQYVGLSVLLRP*TVSAPA
Trigger: AGCGGGAGCCGAGACGGTGCAGGGCCGGAGAAGCAC...ACTGAGGCCCACGTACTGGGGCTGGTGAATCACGCTGTGGCCCAGAACGAGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476477.6
CDS-3UTR GCA 90 bp GAAGAGCAGGACACGCACTTGCCGGTCCTCCCGCAGCTGGGCCAGAGTTTCCAGGGGCCAAGCGTCTGTTaGCTCCTTCCGCACCTCCCG +
Preference number: 4 (lower is better)
Translates to: EEQDTHLPVLPQLGQSFQGPSVC*LLPHLP
Trigger: CGGGAGGTGCGGAAGGAGGCAACAGACGCTTGGCCC...CTGGAAACTCTGGCCCAGCTGCGGGAGGACCGGCAAGTGCGTGTCCTGCTCTTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476477.6
ENST00000544365.5
CDS-3UTR CCA 90 bp CCACAGCGTGATTCACCAGCCCCAGTACGTGGGCCTCAGTTCCACTCAGTCGTCGCCAGGGCGCGCACTTaGATCTCTGAGCCCCCGGCC +
Preference number: 4 (lower is better)
Translates to: PQRDSPAPVRGPQFHSVVARART*ISEPPA
Trigger: GGCCGGGGGCTCAGAGATCCAAGTGCGCGCCCTGGC...GACGACTGAGTGGAACTGAGGCCCACGTACTGGGGCTGGTGAATCACGCTGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371520.5
ENST00000476477.6
CDS-3UTR TCA 90 bp TGCACAGAACACGCCCTTCACTCCACTTCTGAAGAGCAGGACACGCACTTGCCGGCGCACTTGGATCTCTaGGCCCCCGGCCGCCCCGTC +
Preference number: 4 (lower is better)
Translates to: CTEHALHSTSEEQDTHLPAHLDL*APGRPV
Trigger: GACGGGGCGGCCGGGGGCTCAGAGATCCAAGTGCGC...CGGCAAGTGCGTGTCCTGCTCTTCAGAAGTGGAGTGAAGGGCGTGTTCTGTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371520.5
ENST00000476477.6
ENST00000544365.5
CDS-3UTR CCA 90 bp CCACTTCTGAAGAGCAGGACACGCACTTGCCGGTCCTCCCGCAGCTGGGCCAGAAGGCCCCGGAGTCGCTaGACAAACACCCCCACCTCT +
Preference number: 4 (lower is better)
Translates to: PLLKSRTRTCRSSRSWARRPRSR*TNTPTS
Trigger: AGAGGTGGGGGTGTTTGTCCAGCGACTCCGGGGCCT...TCTGGCCCAGCTGCGGGAGGACCGGCAAGTGCGTGTCCTGCTCTTCAGAAGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371520.5
ENST00000476477.6
ENST00000544365.5
CDS-3UTR CCA 90 bp CCACAGCGTGATTCACCAGCCCCAGTACGTGGGCCTCAGTTCCACTCAGTCGTCTGGGGCAGGATCTCCTaGGCCAGTGCTCGTGCCCGC +
Preference number: 4 (lower is better)
Translates to: PQRDSPAPVRGPQFHSVVWGRIS*ASARAR
Trigger: GCGGGCACGAGCACTGGCCCAGGAGATCCTGCCCCA...GACGACTGAGTGGAACTGAGGCCCACGTACTGGGGCTGGTGAATCACGCTGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371520.5
ENST00000476477.6
CDS-3UTR TCA 90 bp GCTGTGTGCTGGCCTCTACTAGACACCGTGATTCCAGAGACCAGGACAGACTCAGCGCACTTGGATCTCTaGGCCCCCGGCCGCCCCGTC +
Preference number: 4 (lower is better)
Translates to: AVCWPLLDTVIPETRTDSAHLDL*APGRPV
Trigger: GACGGGGCGGCCGGGGGCTCAGAGATCCAAGTGCGC...TGAGTCTGTCCTGGTCTCTGGAATCACGGTGTCTAGTAGAGGCCAGCACACAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371520.5
ENST00000476477.6
ENST00000542552.1
CDS-3UTR GCA 90 bp CCACTTCTGAAGAGCAGGACACGCACTTGCCGGTCCTCCCGCAGCTGGGCCAGACCGCTCCTTCAGGTCTaGACCTGCACAGAACACGCC +
Preference number: 4 (lower is better)
Translates to: PLLKSRTRTCRSSRSWARPLLQV*TCTEHA
Trigger: GGCGTGTTCTGTGCAGGTGCAGACCTGAAGGAGCGG...TCTGGCCCAGCTGCGGGAGGACCGGCAAGTGCGTGTCCTGCTCTTCAGAAGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371520.5
ENST00000476477.6
ENST00000544365.5
CDS-3UTR GCA 90 bp TCCACTTCTGAAGAGCAGGACACGCACTTGCCGGTCCTCCCGCAGCTGGGCCAGGAAAGCAGCTGGCTCTaGCTAATCCTGGGCTGCGGG +
Preference number: 4 (lower is better)
Translates to: STSEEQDTHLPVLPQLGQESSWL*LILGCG
Trigger: CCCGCAGCCCAGGATTAGGCAGAGCCAGCTGCTTTC...CTGGCCCAGCTGCGGGAGGACCGGCAAGTGCGTGTCCTGCTCTTCAGAAGTGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371520.5
CDS-3UTR CCA 90 bp CAGAACACGCCCTTCACTCCACTTCTGAAGAGCAGGACACGCACTTGCCGGTCCACGGCAATGGGGGCCTaGGGCAGGATCTCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: QNTPFTPLLKSRTRTCRSTAMGA*GRISWA
Trigger: GGCCCAGGAGATCCTGCCCCAGGCCCCCATTGCCGT...GGACCGGCAAGTGCGTGTCCTGCTCTTCAGAAGTGGAGTGAAGGGCGTGTTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371520.5
ENST00000476477.6
CDS-3UTR TCA 90 bp TCCTTCAGGTCTGCACCTGCACAGAACACGCCCTTCACTCCACTTCTGAAGAGCCGTCTCGGCTCCCGCTaGGAGCTCGCAGTTCCGGCG +
Preference number: 4 (lower is better)
Translates to: SFRSAPAQNTPFTPLLKSRLGSR*ELAVPA
Trigger: CGCCGGAACTGCGAGCTCTCAGCGGGAGCCGAGACG...GCTCTTCAGAAGTGGAGTGAAGGGCGTGTTCTGTGCAGGTGCAGACCTGAAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476477.6
ENST00000544365.5
CDS-3UTR TCA 90 bp TGGGCCAGAGTTTCCAGCAGCTCACTGACGAAGACATTCCCCAAGGCATTGCGGGGGGACAGGGAGACTTaGGCGGAGGAGGTCGGGGGA +
Preference number: 4 (lower is better)
Translates to: WARVSSSSLTKTFPKALRGDRET*AEEVGG
Trigger: TCCCCCGACCTCCTCCGCTCAAGTCTCCCTGTCCCC...CCGCAATGCCTTGGGGAATGTCTTCGTCAGTGAGCTGCTGGAAACTCTGGCCCA
62% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000476477.6
ENST00000544365.5
CDS-3UTR GCA 90 bp TGCACAGAACACGCCCTTCACTCCACTTCTGAAGAGCAGGACACGCACTTGCCGGTGCTTCTCCGGCCCTaGACCGTCTCGGCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: CTEHALHSTSEEQDTHLPVLLRP*TVSAPA
Trigger: AGCGGGAGCCGAGACGGTGCAGGGCCGGAGAAGCAC...CGGCAAGTGCGTGTCCTGCTCTTCAGAAGTGGAGTGAAGGGCGTGTTCTGTGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476477.6
ENST00000544365.5
CDS-3UTR CCA 90 bp CCGGTCCTCCCGCAGCTGGGCCAGAGTTTCCAGCAGCTCACTGACGAAGACATTAGGCCCCGGAGTCGCTaGACAAACACCCCCACCTCT +
Preference number: 4 (lower is better)
Translates to: PVLPQLGQSFQQLTDEDIRPRSR*TNTPTS
Trigger: AGAGGTGGGGGTGTTTGTCCAGCGACTCCGGGGCCT...AATGTCTTCGTCAGTGAGCTGCTGGAAACTCTGGCCCAGCTGCGGGAGGACCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000371520.5
ENST00000476477.6
ENST00000544365.5
CDS-3UTR CCA 90 bp CACTCCACTTCTGAAGAGCAGGACACGCACTTGCCGGTCCTCCCGCAGCTGGGCACCAGCCCCAGTACGTaGGCCTCAGTTCCACTCAGT +
Preference number: 4 (lower is better)
Translates to: HSTSEEQDTHLPVLPQLGTSPST*ASVPLS
Trigger: ACTGAGTGGAACTGAGGCCCACGTACTGGGGCTGGT...GCCCAGCTGCGGGAGGACCGGCAAGTGCGTGTCCTGCTCTTCAGAAGTGGAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371520.5
ENST00000476477.6
3UTR CAA 72 bp GCCCTTCACTCCACTTCTGAAGAGCAGGACACGCACTaGCCGGTCCTCCCGCAGCTGGGCCAGAGTTTCCAG +
Preference number: 4 (lower is better)
Translates to: ALHSTSEEQDTH*PVLPQLGQSFQ
Trigger: CTGGAAACTCTGGCCCAGCTGCGGGAGGACCGGCAAGTGCGTGTCCTGCTCTTCAGAAGTGGAGTGAAGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371520.5
ENST00000476477.6
ENST00000544365.5
CDS-3UTR TCA 90 bp AAGGCCTGTCCTCATGGAACCTACAGCCTTCAAATGAGCCCATGGGTAGAGGAGCGTCTCGGCTCCCGCTaGGAGCTCGCAGTTCCGGCG +
Preference number: 4 (lower is better)
Translates to: KACPHGTYSLQMSPWVEERLGSR*ELAVPA
Trigger: CGCCGGAACTGCGAGCTCTCAGCGGGAGCCGAGACG...CTCCTCTACCCATGGGCTCATTTGAAGGCTGTAGGTTCCATGAGGACAGGCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542552.1
CDS-3UTR TCA 90 bp CAGAGTTTCCAGCAGCTCACTGACGAAGACATTCCCCAAGGCATTGCGGGCAGAGGGGACAGGGAGACTTaGGCGGAGGAGGTCGGGGGA +
Preference number: 4 (lower is better)
Translates to: QSFQQLTDEDIPQGIAGRGDRET*AEEVGG
Trigger: TCCCCCGACCTCCTCCGCTCAAGTCTCCCTGTCCCC...TCTGCCCGCAATGCCTTGGGGAATGTCTTCGTCAGTGAGCTGCTGGAAACTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000476477.6
ENST00000544365.5
CDS-3UTR GCA 90 bp CAGCTCACTGACGAAGACATTCCCCAAGGCATTGCGGGCAGAAGGTCTGTTCATCCTCTGAGTCCCTCCTaGCCCCGGGAGGAGCCCTCG +
Preference number: 4 (lower is better)
Translates to: QLTDEDIPQGIAGRRSVHPLSPS*PREEPS
Trigger: CGAGGGCTCCTCCCGGGGGCAGGAGGGACTCAGAGG...ATGAACAGACCTTCTGCCCGCAATGCCTTGGGGAATGTCTTCGTCAGTGAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371520.5
ENST00000476477.6
CDS-3UTR GCA 90 bp CGTTCTGGGCCACAGCGTGATTCACCAGCCCCAGTACGTGGGCCTCAGTTCCACGGTCAATGGCTACTTTaGCCAGCCGCACGGCAATGG +
Preference number: 4 (lower is better)
Translates to: RSGPQRDSPAPVRGPQFHGQWLL*PAARQW
Trigger: CCATTGCCGTGCGGCTGGGCAAAGTAGCCATTGACC...GTGGAACTGAGGCCCACGTACTGGGGCTGGTGAATCACGCTGTGGCCCAGAACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371520.5
ENST00000476477.6
CDS-3UTR CCA 90 bp CCGCTCCTTCAGGTCTGCACCTGCACAGAACACGCCCTTCACTCCACTTCTGAACGGTCCTCCCGCAGCTaGGCCAGAGTTTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PLLQVCTCTEHALHSTSERSSRS*ARVSSS
Trigger: GCTGCTGGAAACTCTGGCCCAGCTGCGGGAGGACCG...TTCAGAAGTGGAGTGAAGGGCGTGTTCTGTGCAGGTGCAGACCTGAAGGAGCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371520.5
ENST00000476477.6
ENST00000544365.5
CDS-3UTR CCA 90 bp CAGAGTTTCCAGCAGCTCACTGACGAAGACATTCCCCAAGGCATTGCGGGCAGAACGGCAATGGGGGCCTaGGGCAGGATCTCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: QSFQQLTDEDIPQGIAGRTAMGA*GRISWA
Trigger: GGCCCAGGAGATCCTGCCCCAGGCCCCCATTGCCGT...TCTGCCCGCAATGCCTTGGGGAATGTCTTCGTCAGTGAGCTGCTGGAAACTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371520.5
ENST00000476477.6
CDS-3UTR TCA 90 bp GAAGAGCAGGACACGCACTTGCCGGTCCTCCCGCAGCTGGGCCAGAGTTTCCAGTCTCAATCAGTCCCATaGCTGCCGAGGAAGCGATGT +
Preference number: 4 (lower is better)
Translates to: EEQDTHLPVLPQLGQSFQSQSVP*LPRKRC
Trigger: ACATCGCTTCCTCGGCAGTCATGGGACTGATTGAGA...CTGGAAACTCTGGCCCAGCTGCGGGAGGACCGGCAAGTGCGTGTCCTGCTCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371520.5
CDS-3UTR TCA 90 bp CATTCATCAGGCCCCGGAGTCGCTGGACAAACACCCCCACCTCTGCTTCACTCATTCTGGGCCACAGCGTaGTTCACCAGCCCCAGTACG +
Preference number: 4 (lower is better)
Translates to: HSSGPGVAGQTPPPLLHSFWATA*FTSPST
Trigger: CGTACTGGGGCTGGTGAATCACGCTGTGGCCCAGAA...TGAGTGAAGCAGAGGTGGGGGTGTTTGTCCAGCGACTCCGGGGCCTGATGAATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371520.5
ENST00000476477.6
CDS-3UTR GCA 90 bp CACTCCACTTCTGAAGAGCAGGACACGCACTTGCCGGTCCTCCCGCAGCTGGGCCATTCCCCAAGGCATTaGGGGCAGAAGGTCTGTTCA +
Preference number: 4 (lower is better)
Translates to: HSTSEEQDTHLPVLPQLGHSPRH*GQKVCS
Trigger: TGAACAGACCTTCTGCCCGCAATGCCTTGGGGAATG...GCCCAGCTGCGGGAGGACCGGCAAGTGCGTGTCCTGCTCTTCAGAAGTGGAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371520.5
ENST00000476477.6
ENST00000544365.5
CDS-3UTR GCA 90 bp CAGATCCTCACCGATGTCATTCATCAGGCCCCGGAGTCGCTGGACAAACACCCCCCGCTCCTTCAGGTCTaGACCTGCACAGAACACGCC +
Preference number: 4 (lower is better)
Translates to: QILTDVIHQAPESLDKHPPLLQV*TCTEHA
Trigger: GGCGTGTTCTGTGCAGGTGCAGACCTGAAGGAGCGG...GGGGTGTTTGTCCAGCGACTCCGGGGCCTGATGAATGACATCGGTGAGGATCTG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000544365.5
CDS-3UTR GCA 90 bp GAAGGCAATCTGGCCACAAATCTTCCTTCTGGATCCTGCTCTTCAGGGCATGCACCTCTGAGTCCCTCCTaGCCCCGGGAGGAGCCCTCG +
Preference number: 4 (lower is better)
Translates to: EGNLATNLPSGSCSSGHAPLSPS*PREEPS
Trigger: CGAGGGCTCCTCCCGGGGGCAGGAGGGACTCAGAGG...TGCATGCCCTGAAGAGCAGGATCCAGAAGGAAGATTTGTGGCCAGATTGCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358358.9
ENST00000371520.5
ENST00000371522.9
ENST00000476477.6
ENST00000536120.5
CDS-3UTR GCA 90 bp AGGACACGCACTTGCCGGTCCTCCCGCAGCTGGGCCAGAGTTTCCAGCAGCTCAAATGGCCATCCCAGATaGAATGTCCACCTCCGTTCC +
Preference number: 4 (lower is better)
Translates to: RTRTCRSSRSWARVSSSSNGHPR*NVHLRS
Trigger: GGAACGGAGGTGGACATTGCATCTGGGATGGCCATT...TGAGCTGCTGGAAACTCTGGCCCAGCTGCGGGAGGACCGGCAAGTGCGTGTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371520.5
ENST00000476477.6
CDS-3UTR CCA 90 bp TGCTGTGTGCTGGCCTCTACTAGACACCGTGATTCCAGAGACCAGGACAGACTCCGGTCCTCCCGCAGCTaGGCCAGAGTTTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: CCVLASTRHRDSRDQDRLRSSRS*ARVSSS
Trigger: GCTGCTGGAAACTCTGGCCCAGCTGCGGGAGGACCG...GAGTCTGTCCTGGTCTCTGGAATCACGGTGTCTAGTAGAGGCCAGCACACAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371520.5
ENST00000476477.6
CDS-3UTR CCA 90 bp TGGGCCAGAGTTTCCAGCAGCTCACTGACGAAGACATTCCCCAAGGCATTGCGGTCCTCAGCTTTGTCTTaGTCCGGACCCGCCAGGGCG +
Preference number: 4 (lower is better)
Translates to: WARVSSSSLTKTFPKALRSSALS*SGPARA
Trigger: CGCCCTGGCGGGTCCGGACCAAGACAAAGCTGAGGA...CCGCAATGCCTTGGGGAATGTCTTCGTCAGTGAGCTGCTGGAAACTCTGGCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476477.6
CDS-3UTR TCA 90 bp GTGCTGGCCTCTACTAGACACCGTGATTCCAGAGACCAGGACAGACTCAAGGCCGAGTCCGCTTCTCCCTaGAGGCTGCCATGCCCTCTA +
Preference number: 4 (lower is better)
Translates to: VLASTRHRDSRDQDRLKAESASP*RLPCPL
Trigger: TAGAGGGCATGGCAGCCTTCAGGGAGAAGCGGACTC...GGCCTTGAGTCTGTCCTGGTCTCTGGAATCACGGTGTCTAGTAGAGGCCAGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371520.5
ENST00000476477.6
CDS-3UTR TCA 90 bp CAGAACACGCCCTTCACTCCACTTCTGAAGAGCAGGACACGCACTTGCCGGTCCCCAGAACTCCCTCTCTaGGAGAACTGCCCTCGGTCA +
Preference number: 4 (lower is better)
Translates to: QNTPFTPLLKSRTRTCRSPELPL*ENCPRS
Trigger: TGACCGAGGGCAGTTCTCTCAGAGAGGGAGTTCTGG...GGACCGGCAAGTGCGTGTCCTGCTCTTCAGAAGTGGAGTGAAGGGCGTGTTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544365.5
CDS-3UTR GCA 90 bp AAGGCAATCTGGCCACAAATCTTCCTTCTGGATCCTGCTCTTCAGGGCATGCATCCTCTGAGTCCCTCCTaGCCCCGGGAGGAGCCCTCG +
Preference number: 4 (lower is better)
Translates to: KAIWPQIFLLDPALQGMHPLSPS*PREEPS
Trigger: CGAGGGCTCCTCCCGGGGGCAGGAGGGACTCAGAGG...ATGCATGCCCTGAAGAGCAGGATCCAGAAGGAAGATTTGTGGCCAGATTGCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358358.9
ENST00000371520.5
ENST00000371522.9
ENST00000476477.6
ENST00000536120.5
CDS-3UTR GCA 90 bp TCCCTTTCAGGTGATGCCTCTGCACTCCTTCACTGCTTCTCTTCTGCCCAATTACCTCTGAGTCCCTCCTaGCCCCGGGAGGAGCCCTCG +
Preference number: 4 (lower is better)
Translates to: SLSGDASALLHCFSSAQLPLSPS*PREEPS
Trigger: CGAGGGCTCCTCCCGGGGGCAGGAGGGACTCAGAGG...TAATTGGGCAGAAGAGAAGCAGTGAAGGAGTGCAGAGGCATCACCTGAAAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476477.6
CDS-3UTR GCA 90 bp GCTGTTTCTCCTCCTACGAAAAATCAGGATGGACATTTCAGGTCTTCCCAGGGCCTGGGCCAGTGCTCGTaGCCGCTGGTAGGCGGCGTC +
Preference number: 4 (lower is better)
Translates to: AVSPPTKNQDGHFRSSQGLGQCS*PLVGGV
Trigger: GACGCCGCCTACCAGCGGGCACGAGCACTGGCCCAG...GCCCTGGGAAGACCTGAAATGTCCATCCTGATTTTTCGTAGGAGGAGAAACAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000476477.6
CDS-3UTR GCA 90 bp CAGAGTTTCCAGCAGCTCACTGACGAAGACATTCCCCAAGGCATTGCGGGCAGAGCGCCGCCCCGGAACTaGACATTTACCTTGGTCCGG +
Preference number: 4 (lower is better)
Translates to: QSFQQLTDEDIPQGIAGRAPPRN*TFTLVR
Trigger: CCGGACCAAGGTAAATGTGCAGTTCCGGGGCGGCGC...TCTGCCCGCAATGCCTTGGGGAATGTCTTCGTCAGTGAGCTGCTGGAAACTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371520.5
CDS-3UTR GCA 90 bp TCCTACCTTTCAGGTGATGCCTCTGCACTCCTTCACTGCTTCTCTTCTGCCCAAGTGCTTCTCCGGCCCTaGACCGTCTCGGCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: SYLSGDASALLHCFSSAQVLLRP*TVSAPA
Trigger: AGCGGGAGCCGAGACGGTGCAGGGCCGGAGAAGCAC...TTGGGCAGAAGAGAAGCAGTGAAGGAGTGCAGAGGCATCACCTGAAAGGTAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542552.1
CDS-3UTR GCA 90 bp GAACACGCCCTTCACTCCACTTCTGAAGAGCAGGACACGCACTTGCCGGTCCTCGGGTGCAGGGAAGGCTaGGATGTCATTCATCAGGCC +
Preference number: 4 (lower is better)
Translates to: EHALHSTSEEQDTHLPVLGCREG*DVIHQA
Trigger: GGCCTGATGAATGACATCGCAGCCTTCCCTGCACCC...GAGGACCGGCAAGTGCGTGTCCTGCTCTTCAGAAGTGGAGTGAAGGGCGTGTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476477.6
CDS-3UTR GCA 90 bp TGCACAGAACACGCCCTTCACTCCACTTCTGAAGAGCAGGACACGCACTTGCCGAGCCGCAATGGTGGGTaGAGGGAAGGCTGCGATGTC +
Preference number: 4 (lower is better)
Translates to: CTEHALHSTSEEQDTHLPSRNGG*REGCDV
Trigger: GACATCGCAGCCTTCCCTGCACCCACCATTGCGGCT...CGGCAAGTGCGTGTCCTGCTCTTCAGAAGTGGAGTGAAGGGCGTGTTCTGTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476477.6
CDS-3UTR CCA 90 bp GGGCTGAAATCCAGCAGGTGCCCAGAGGAGTGTTTCCCAATCCTTTGGCCTTCAAGGCCCCGGAGTCGCTaGACAAACACCCCCACCTCT +
Preference number: 4 (lower is better)
Translates to: GLKSSRCPEECFPILWPSRPRSR*TNTPTS
Trigger: AGAGGTGGGGGTGTTTGTCCAGCGACTCCGGGGCCT...TGAAGGCCAAAGGATTGGGAAACACTCCTCTGGGCACCTGCTGGATTTCAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476477.6
CDS-3UTR CCA 90 bp AGCAGGACACGCACTTGCCGGTCCTCCCGCAGCTGGGCCAGAGTTTCCAGCAGCCACAAATCTTCCTTCTaGATCCTGCTCTTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: SRTRTCRSSRSWARVSSSHKSSF*ILLFRA
Trigger: TGCCCTGAAGAGCAGGATCCAGAAGGAAGATTTGTG...GCTGCTGGAAACTCTGGCCCAGCTGCGGGAGGACCGGCAAGTGCGTGTCCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371520.5
ENST00000476477.6
CDS-3UTR TCA 90 bp AAAGCAAACCCAACCCTCGTGATTATTTCTAGCCAGGGTGAAGCTAAGGAAGGTGCGCACTTGGATCTCTaGGCCCCCGGCCGCCCCGTC +
Preference number: 4 (lower is better)
Translates to: KANPTLVIISSQGEAKEGAHLDL*APGRPV
Trigger: GACGGGGCGGCCGGGGGCTCAGAGATCCAAGTGCGC...ACCTTCCTTAGCTTCACCCTGGCTAGAAATAATCACGAGGGTTGGGTTTGCTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358358.9
ENST00000371520.5
ENST00000371522.9
ENST00000536120.5
CDS-3UTR TCA 90 bp CAGAGTTTCCAGCAGCTCACTGACGAAGACATTCCCCAAGGCATTGCGGGCAGATTCTGGGCCACAGCGTaGTTCACCAGCCCCAGTACG +
Preference number: 4 (lower is better)
Translates to: QSFQQLTDEDIPQGIAGRFWATA*FTSPST
Trigger: CGTACTGGGGCTGGTGAATCACGCTGTGGCCCAGAA...TCTGCCCGCAATGCCTTGGGGAATGTCTTCGTCAGTGAGCTGCTGGAAACTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371520.5
ENST00000476477.6
CDS-3UTR GCA 90 bp AAGGCAATCTGGCCACAAATCTTCCTTCTGGATCCTGCTCTTCAGGGCATGCATGTCCCAGTCGCGTCATaGGCCGCCCCGGAACTGCAC +
Preference number: 4 (lower is better)
Translates to: KAIWPQIFLLDPALQGMHVPVAS*AAPELH
Trigger: GTGCAGTTCCGGGGCGGCGCATGACGCGACTGGGAC...ATGCATGCCCTGAAGAGCAGGATCCAGAAGGAAGATTTGTGGCCAGATTGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371520.5
CDS-3UTR GCA 90 bp GCAAACCCAACCCTCGTGATTATTTCTAGCCAGGGTGAAGCTAAGGAAGGTAGCGTGCTTCTCCGGCCCTaGACCGTCTCGGCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: ANPTLVIISSQGEAKEGSVLLRP*TVSAPA
Trigger: AGCGGGAGCCGAGACGGTGCAGGGCCGGAGAAGCAC...GCTACCTTCCTTAGCTTCACCCTGGCTAGAAATAATCACGAGGGTTGGGTTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371522.9
ENST00000536120.5
CDS-3UTR GCA 90 bp TCCTCCTCCATCCCCCTGGGTGAGTCATCTGTCTTATCACAGAACTCCAAACAGGGGCCAAGCGTCTGTTaGCTCCTTCCGCACCTCCCG +
Preference number: 4 (lower is better)
Translates to: SSSIPLGESSVLSQNSKQGPSVC*LLPHLP
Trigger: CGGGAGGTGCGGAAGGAGGCAACAGACGCTTGGCCC...CTGTTTGGAGTTCTGTGATAAGACAGATGACTCACCCAGGGGGATGGAGGAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544365.5
CDS-3UTR CCA 90 bp GCAAACCCAACCCTCGTGATTATTTCTAGCCAGGGTGAAGCTAAGGAAGGTAGCTGGGGCAGGATCTCCTaGGCCAGTGCTCGTGCCCGC +
Preference number: 4 (lower is better)
Translates to: ANPTLVIISSQGEAKEGSWGRIS*ASARAR
Trigger: GCGGGCACGAGCACTGGCCCAGGAGATCCTGCCCCA...GCTACCTTCCTTAGCTTCACCCTGGCTAGAAATAATCACGAGGGTTGGGTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358358.9
ENST00000371520.5
ENST00000371522.9
ENST00000536120.5
CDS-3UTR CCA 90 bp AAGGCAATCTGGCCACAAATCTTCCTTCTGGATCCTGCTCTTCAGGGCATGCATACGGCAATGGGGGCCTaGGGCAGGATCTCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: KAIWPQIFLLDPALQGMHTAMGA*GRISWA
Trigger: GGCCCAGGAGATCCTGCCCCAGGCCCCCATTGCCGT...ATGCATGCCCTGAAGAGCAGGATCCAGAAGGAAGATTTGTGGCCAGATTGCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358358.9
ENST00000371520.5
ENST00000371522.9
ENST00000476477.6
CDS-3UTR TCA 90 bp GAACACGCCCTTCACTCCACTTCTGAAGAGCAGGACACGCACTTGCCGGTCCTCTTTCCAGCAGCTCACTaGCGAAGACATTCCCCAAGG +
Preference number: 4 (lower is better)
Translates to: EHALHSTSEEQDTHLPVLFPAAH*RRHSPR
Trigger: CCTTGGGGAATGTCTTCGTCAGTGAGCTGCTGGAAA...GAGGACCGGCAAGTGCGTGTCCTGCTCTTCAGAAGTGGAGTGAAGGGCGTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371520.5
ENST00000476477.6
ENST00000544365.5
CDS-3UTR TCA 90 bp TTCCCAGGGCTGAAATCCAGCAGGTGCCCAGAGGAGTGTTTCCCAATCCTTTGGGAGATGGGGACAGGTTaGCTCAGTCCCATGCCCAAG +
Preference number: 4 (lower is better)
Translates to: FPGLKSSRCPEECFPILWEMGTG*LSPMPK
Trigger: CTTGGGCATGGGACTGAGTCAACCTGTCCCCATCTC...CCAAAGGATTGGGAAACACTCCTCTGGGCACCTGCTGGATTTCAGCCCTGGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476477.6
CDS-3UTR TCA 90 bp TGCACAGAACACGCCCTTCACTCCACTTCTGAAGAGCAGGACACGCACTTGCCGGCGGGACACAAAAGCTaGAGAGCCAGAACTCCCTCT +
Preference number: 4 (lower is better)
Translates to: CTEHALHSTSEEQDTHLPAGHKS*RARTPS
Trigger: AGAGGGAGTTCTGGCTCTTCAGCTTTTGTGTCCCGC...CGGCAAGTGCGTGTCCTGCTCTTCAGAAGTGGAGTGAAGGGCGTGTTCTGTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544365.5
CDS-3UTR TCA 90 bp CAAGGCATTGCGGGCAGAAGGTCTGTTCATCAGAATCTCAGTGATCCCTTTCAGGCCAGGCTTGAACCCTaGGGGTGGGGCGGGACACAA +
Preference number: 4 (lower is better)
Translates to: QGIAGRRSVHQNLSDPFQARLEP*GWGGTQ
Trigger: TTGTGTCCCGCCCCACCCTCAGGGTTCAAGCCTGGC...CTGAAAGGGATCACTGAGATTCTGATGAACAGACCTTCTGCCCGCAATGCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544365.5
CDS-3UTR GCA 90 bp TCCAAAGCAAACCCAACCCTCGTGATTATTTCTAGCCAGGGTGAAGCTAAGGAACCTCTGAGTCCCTCCTaGCCCCGGGAGGAGCCCTCG +
Preference number: 4 (lower is better)
Translates to: SKANPTLVIISSQGEAKEPLSPS*PREEPS
Trigger: CGAGGGCTCCTCCCGGGGGCAGGAGGGACTCAGAGG...TTCCTTAGCTTCACCCTGGCTAGAAATAATCACGAGGGTTGGGTTTGCTTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358358.9
ENST00000371520.5
ENST00000371522.9
ENST00000536120.5
CDS-3UTR GCA 90 bp AAAGCAAACCCAACCCTCGTGATTATTTCTAGCCAGGGTGAAGCTAAGGAAGGTCTGGGCCAGTGCTCGTaGCCGCTGGTAGGCGGCGTC +
Preference number: 4 (lower is better)
Translates to: KANPTLVIISSQGEAKEGLGQCS*PLVGGV
Trigger: GACGCCGCCTACCAGCGGGCACGAGCACTGGCCCAG...ACCTTCCTTAGCTTCACCCTGGCTAGAAATAATCACGAGGGTTGGGTTTGCTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358358.9
ENST00000371520.5
ENST00000371522.9
ENST00000536120.5
CDS-3UTR GCA 90 bp AACAATTTGTCCACGGTTATACAGCAAGTAACTGGCAGAGACTGGGATCTGCAGCTGGGCCAGTGCTCGTaGCCGCTGGTAGGCGGCGTC +
Preference number: 4 (lower is better)
Translates to: NNLSTVIQQVTGRDWDLQLGQCS*PLVGGV
Trigger: GACGCCGCCTACCAGCGGGCACGAGCACTGGCCCAG...CTGCAGATCCCAGTCTCTGCCAGTTACTTGCTGTATAACCGTGGACAAATTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371522.9
ENST00000536120.5
CDS-3UTR GCA 90 bp TCCAAAGCAAACCCAACCCTCGTGATTATTTCTAGCCAGGGTGAAGCTAAGGAACTGGGCCAGTGCTCGTaGCCGCTGGTAGGCGGCGTC +
Preference number: 4 (lower is better)
Translates to: SKANPTLVIISSQGEAKELGQCS*PLVGGV
Trigger: GACGCCGCCTACCAGCGGGCACGAGCACTGGCCCAG...TTCCTTAGCTTCACCCTGGCTAGAAATAATCACGAGGGTTGGGTTTGCTTTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358358.9
ENST00000371520.5
ENST00000371522.9
ENST00000536120.5
CDS-3UTR GCA 90 bp CCACTTCTGAAGAGCAGGACACGCACTTGCCGGTCCTCCCGCAGCTGGGCCAGATCTGCACTCCTTCACTaGTTCTCTTCTGCCCAATTA +
Preference number: 4 (lower is better)
Translates to: PLLKSRTRTCRSSRSWARSALLH*FSSAQL
Trigger: TAATTGGGCAGAAGAGAAGCAGTGAAGGAGTGCAGA...TCTGGCCCAGCTGCGGGAGGACCGGCAAGTGCGTGTCCTGCTCTTCAGAAGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371520.5
ENST00000476477.6
ENST00000544365.5
CDS-3UTR GCA 90 bp CTCCTCGTTCTGGGCCACAGCGTGATTCACCAGCCCCAGTACGTGGGCCTCAGTGGAGAGAAAAACCCTTaGTCTTTCTGCCTCAGAGAG +
Preference number: 4 (lower is better)
Translates to: LLVLGHSVIHQPQYVGLSGEKNP*SFCLRE
Trigger: CTCTCTGAGGCAGAAAGAGCAAGGGTTTTTCTCTCC...ACTGAGGCCCACGTACTGGGGCTGGTGAATCACGCTGTGGCCCAGAACGAGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371520.5
CDS-3UTR CCA 90 bp TCCAAAGCAAACCCAACCCTCGTGATTATTTCTAGCCAGGGTGAAGCTAAGGAAGCCAGGGCGCGCACTTaGATCTCTGAGCCCCCGGCC +
Preference number: 4 (lower is better)
Translates to: SKANPTLVIISSQGEAKEARART*ISEPPA
Trigger: GGCCGGGGGCTCAGAGATCCAAGTGCGCGCCCTGGC...TTCCTTAGCTTCACCCTGGCTAGAAATAATCACGAGGGTTGGGTTTGCTTTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358358.9
ENST00000371520.5
ENST00000371522.9
ENST00000536120.5
CDS-3UTR CCA 90 bp TCCTTCAGGTCTGCACCTGCACAGAACACGCCCTTCACTCCACTTCTGAAGAGCACCAGCCCCAGTACGTaGGCCTCAGTTCCACTCAGT +
Preference number: 4 (lower is better)
Translates to: SFRSAPAQNTPFTPLLKSTSPST*ASVPLS
Trigger: ACTGAGTGGAACTGAGGCCCACGTACTGGGGCTGGT...GCTCTTCAGAAGTGGAGTGAAGGGCGTGTTCTGTGCAGGTGCAGACCTGAAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371520.5
ENST00000476477.6
CDS-3UTR CCA 90 bp CAGATCCTCACCGATGTCATTCATCAGGCCCCGGAGTCGCTGGACAAACACCCCGCACAGGATCAGAGATaGGGACAGGTTGACTCAGTC +
Preference number: 4 (lower is better)
Translates to: QILTDVIHQAPESLDKHPAQDQR*GQVDSV
Trigger: GACTGAGTCAACCTGTCCCCATCTCTGATCCTGTGC...GGGGTGTTTGTCCAGCGACTCCGGGGCCTGATGAATGACATCGGTGAGGATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544365.5
CDS-3UTR TCA 90 bp CCAGAGCATTTAAACAATTTGTCCACGGTTATACAGCAAGTAACTGGCAGAGACGCGCACTTGGATCTCTaGGCCCCCGGCCGCCCCGTC +
Preference number: 4 (lower is better)
Translates to: PEHLNNLSTVIQQVTGRDAHLDL*APGRPV
Trigger: GACGGGGCGGCCGGGGGCTCAGAGATCCAAGTGCGC...GTCTCTGCCAGTTACTTGCTGTATAACCGTGGACAAATTGTTTAAATGCTCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371522.9
ENST00000536120.5
CDS-3UTR TCA 90 bp CAGCTCACTGACGAAGACATTCCCCAAGGCATTGCGGGCAGAAGGTCTGTTCATGAGATGGGGACAGGTTaGCTCAGTCCCATGCCCAAG +
Preference number: 4 (lower is better)
Translates to: QLTDEDIPQGIAGRRSVHEMGTG*LSPMPK
Trigger: CTTGGGCATGGGACTGAGTCAACCTGTCCCCATCTC...ATGAACAGACCTTCTGCCCGCAATGCCTTGGGGAATGTCTTCGTCAGTGAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000476477.6
ENST00000544365.5
CDS-3UTR GCA 90 bp GAAGGCAATCTGGCCACAAATCTTCCTTCTGGATCCTGCTCTTCAGGGCATGCACCGCTCCTTCAGGTCTaGACCTGCACAGAACACGCC +
Preference number: 4 (lower is better)
Translates to: EGNLATNLPSGSCSSGHAPLLQV*TCTEHA
Trigger: GGCGTGTTCTGTGCAGGTGCAGACCTGAAGGAGCGG...TGCATGCCCTGAAGAGCAGGATCCAGAAGGAAGATTTGTGGCCAGATTGCCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358358.9
ENST00000371520.5
ENST00000371522.9
ENST00000476477.6
ENST00000536120.5
CDS-3UTR GCA 90 bp AGAGCAGGACACGCACTTGCCGGTCCTCCCGCAGCTGGGCCAGAGTTTCCAGCATATATATTTGCTGTGTaGTGGCCTCTACTAGACACC +
Preference number: 4 (lower is better)
Translates to: RAGHALAGPPAAGPEFPAYIFAV*WPLLDT
Trigger: GGTGTCTAGTAGAGGCCAGCACACAGCAAATATATA...TGCTGGAAACTCTGGCCCAGCTGCGGGAGGACCGGCAAGTGCGTGTCCTGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371520.5
ENST00000476477.6
ENST00000544365.5
CDS-3UTR GCA 90 bp TGCTGTGTGCTGGCCTCTACTAGACACCGTGATTCCAGAGACCAGGACAGACTCGAAGCCTTCGCCAATTaGTCCACCTATGGGCCAAGC +
Preference number: 4 (lower is better)
Translates to: CCVLASTRHRDSRDQDRLEAFAN*STYGPS
Trigger: GCTTGGCCCATAGGTGGAGCAATTGGCGAAGGCTTC...GAGTCTGTCCTGGTCTCTGGAATCACGGTGTCTAGTAGAGGCCAGCACACAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476477.6
CDS-3UTR GCA 90 bp AGCAGGACACGCACTTGCCGGTCCTCCCGCAGCTGGGCCAGAGTTTCCAGCAGCCAAAACTTGAAAGCATaGTTGGGGAAACTTAACTGC +
Preference number: 4 (lower is better)
Translates to: SRTRTCRSSRSWARVSSSQNLKA*LGKLNC
Trigger: GCAGTTAAGTTTCCCCAAGCATGCTTTCAAGTTTTG...GCTGCTGGAAACTCTGGCCCAGCTGCGGGAGGACCGGCAAGTGCGTGTCCTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544365.5
CDS-3UTR CCA 90 bp GCAAACCCAACCCTCGTGATTATTTCTAGCCAGGGTGAAGCTAAGGAAGGTAGCATCTCAGTGATCCCTTaGTCCGGACCCGCCAGGGCG +
Preference number: 4 (lower is better)
Translates to: ANPTLVIISSQGEAKEGSISVIP*SGPARA
Trigger: CGCCCTGGCGGGTCCGGACCAAGGGATCACTGAGAT...GCTACCTTCCTTAGCTTCACCCTGGCTAGAAATAATCACGAGGGTTGGGTTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358358.9
ENST00000371522.9
ENST00000536120.5
CDS-3UTR CCA 90 bp TGCACAGAACACGCCCTTCACTCCACTTCTGAAGAGCAGGACACGCACTTGCCGCCTCCTCCATCCCCCTaGGTGAGTCATCTGTCTTAT +
Preference number: 4 (lower is better)
Translates to: CTEHALHSTSEEQDTHLPPPPSP*VSHLSY
Trigger: ATAAGACAGATGACTCACCCAGGGGGATGGAGGAGG...CGGCAAGTGCGTGTCCTGCTCTTCAGAAGTGGAGTGAAGGGCGTGTTCTGTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544365.5
CDS-3UTR TCA 90 bp TCCTTCAGGTCTGCACCTGCACAGAACACGCCCTTCACTCCACTTCTGAAGAGCTTTCCAGCAGCTCACTaGCGAAGACATTCCCCAAGG +
Preference number: 4 (lower is better)
Translates to: SFRSAPAQNTPFTPLLKSFPAAH*RRHSPR
Trigger: CCTTGGGGAATGTCTTCGTCAGTGAGCTGCTGGAAA...GCTCTTCAGAAGTGGAGTGAAGGGCGTGTTCTGTGCAGGTGCAGACCTGAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371520.5
ENST00000476477.6
ENST00000544365.5
CDS-3UTR TCA 90 bp TTCACTCCACTTCTGAAGAGCAGGACACGCACTTGCCGGTCCTCCCGCAGCTGGCCATCATCATCCTTGTaGAGAAATGGAAGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: FTPLLKSRTRTCRSSRSWPSSSL*RNGSLE
Trigger: CTCCAGACTTCCATTTCTTCACAAGGATGATGATGG...CCAGCTGCGGGAGGACCGGCAAGTGCGTGTCCTGCTCTTCAGAAGTGGAGTGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371520.5
CDS-3UTR GCA 90 bp TCCTTCAGGTCTGCACCTGCACAGAACACGCCCTTCACTCCACTTCTGAAGAGCCATTCCCCAAGGCATTaGGGGCAGAAGGTCTGTTCA +
Preference number: 4 (lower is better)
Translates to: SFRSAPAQNTPFTPLLKSHSPRH*GQKVCS
Trigger: TGAACAGACCTTCTGCCCGCAATGCCTTGGGGAATG...GCTCTTCAGAAGTGGAGTGAAGGGCGTGTTCTGTGCAGGTGCAGACCTGAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371520.5
ENST00000476477.6
ENST00000544365.5
CDS-3UTR GCA 90 bp GCAAACCCAACCCTCGTGATTATTTCTAGCCAGGGTGAAGCTAAGGAAGGTAGCCCGCTCCTTCAGGTCTaGACCTGCACAGAACACGCC +
Preference number: 4 (lower is better)
Translates to: ANPTLVIISSQGEAKEGSPLLQV*TCTEHA
Trigger: GGCGTGTTCTGTGCAGGTGCAGACCTGAAGGAGCGG...GCTACCTTCCTTAGCTTCACCCTGGCTAGAAATAATCACGAGGGTTGGGTTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358358.9
ENST00000371520.5
ENST00000371522.9
ENST00000536120.5
CDS-3UTR GCA 90 bp CCGGTCCTCCCGCAGCTGGGCCAGAGTTTCCAGCAGCTCACTGACGAAGACATTTCTGCACTCCTTCACTaGTTCTCTTCTGCCCAATTA +
Preference number: 4 (lower is better)
Translates to: PVLPQLGQSFQQLTDEDISALLH*FSSAQL
Trigger: TAATTGGGCAGAAGAGAAGCAGTGAAGGAGTGCAGA...AATGTCTTCGTCAGTGAGCTGCTGGAAACTCTGGCCCAGCTGCGGGAGGACCGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000371520.5
ENST00000476477.6
ENST00000544365.5
CDS-3UTR GCA 90 bp AAACAATTTGTCCACGGTTATACAGCAAGTAACTGGCAGAGACTGGGATCTGCAGTGCTTCTCCGGCCCTaGACCGTCTCGGCTCCCGCT +
Preference number: 4 (lower is better)
Translates to: KQFVHGYTASNWQRLGSAVLLRP*TVSAPA
Trigger: AGCGGGAGCCGAGACGGTGCAGGGCCGGAGAAGCAC...TGCAGATCCCAGTCTCTGCCAGTTACTTGCTGTATAACCGTGGACAAATTGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371522.9
ENST00000536120.5
CDS-3UTR GCA 90 bp CAAAAGCTGAAGAGCCAGAACTCCCTCTCTGAGAGAACTGCCCTCGGTCATCCTGAAGCCTTCGCCAATTaGTCCACCTATGGGCCAAGC +
Preference number: 4 (lower is better)
Translates to: QKLKSQNSLSERTALGHPEAFAN*STYGPS
Trigger: GCTTGGCCCATAGGTGGAGCAATTGGCGAAGGCTTC...AGGATGACCGAGGGCAGTTCTCTCAGAGAGGGAGTTCTGGCTCTTCAGCTTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544365.5
CDS-3UTR CCA 90 bp TCCAAAGCAAACCCAACCCTCGTGATTATTTCTAGCCAGGGTGAAGCTAAGGAACGGTCCTCCCGCAGCTaGGCCAGAGTTTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SKANPTLVIISSQGEAKERSSRS*ARVSSS
Trigger: GCTGCTGGAAACTCTGGCCCAGCTGCGGGAGGACCG...TTCCTTAGCTTCACCCTGGCTAGAAATAATCACGAGGGTTGGGTTTGCTTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358358.9
ENST00000371520.5
ENST00000371522.9
ENST00000536120.5
CDS-3UTR CCA 90 bp AACAATTTGTCCACGGTTATACAGCAAGTAACTGGCAGAGACTGGGATCTGCAGCGGTCCTCCCGCAGCTaGGCCAGAGTTTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: NNLSTVIQQVTGRDWDLQRSSRS*ARVSSS
Trigger: GCTGCTGGAAACTCTGGCCCAGCTGCGGGAGGACCG...CTGCAGATCCCAGTCTCTGCCAGTTACTTGCTGTATAACCGTGGACAAATTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371522.9
ENST00000536120.5
CDS-3UTR CCA 90 bp CGTTCTGGGCCACAGCGTGATTCACCAGCCCCAGTACGTGGGCCTCAGTTCCACATGATGAAGGCAATCTaGCCACAAATCTTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: RSGPQRDSPAPVRGPQFHMMKAI*PQIFLL
Trigger: CAGAAGGAAGATTTGTGGCCAGATTGCCTTCATCAT...GTGGAACTGAGGCCCACGTACTGGGGCTGGTGAATCACGCTGTGGCCCAGAACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371520.5
ENST00000476477.6
CDS-3UTR CCA 90 bp AGAGCAGGACACGCACTTGCCGGTCCTCCCGCAGCTGGGCCAGAGTTTCCAGCATTCCCAACCATAAAATaGAGAGAAAAACCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: RAGHALAGPPAAGPEFPAFPTIK*REKPLL
Trigger: GAGCAAGGGTTTTTCTCTCCATTTTATGGTTGGGAA...TGCTGGAAACTCTGGCCCAGCTGCGGGAGGACCGGCAAGTGCGTGTCCTGCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371520.5
CDS-3UTR CCA 90 bp CCACAGCGTGATTCACCAGCCCCAGTACGTGGGCCTCAGTTCCACTCAGTCGTCCTCCTCTGTGTGATTTaGTGTAACTCTGTCAACCTC +
Preference number: 4 (lower is better)
Translates to: PQRDSPAPVRGPQFHSVVLLCVI*CNSVNL
Trigger: GAGGTTGACAGAGTTACACCAAATCACACAGAGGAG...GACGACTGAGTGGAACTGAGGCCCACGTACTGGGGCTGGTGAATCACGCTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476477.6
CDS-3UTR TCA 90 bp CAGTCATTTTATTTCCATCATCATCCTTGTGAAGAAATGGAAGTCTGGAGAGGTGCGCACTTGGATCTCTaGGCCCCCGGCCGCCCCGTC +
Preference number: 4 (lower is better)
Translates to: QSFYFHHHPCEEMEVWRGAHLDL*APGRPV
Trigger: GACGGGGCGGCCGGGGGCTCAGAGATCCAAGTGCGC...ACCTCTCCAGACTTCCATTTCTTCACAAGGATGATGATGGAAATAAAATGACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000358358.9
ENST00000371520.5
ENST00000371522.9
ENST00000536120.5
CDS-3UTR TCA 90 bp TTTAAACAATTTGTCCACGGTTATACAGCAAGTAACTGGCAGAGACTGGGATCTCGTCTCGGCTCCCGCTaGGAGCTCGCAGTTCCGGCG +
Preference number: 4 (lower is better)
Translates to: FKQFVHGYTASNWQRLGSRLGSR*ELAVPA
Trigger: CGCCGGAACTGCGAGCTCTCAGCGGGAGCCGAGACG...AGATCCCAGTCTCTGCCAGTTACTTGCTGTATAACCGTGGACAAATTGTTTAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536120.5
CDS-3UTR TCA 90 bp CCGCTCCTTCAGGTCTGCACCTGCACAGAACACGCCCTTCACTCCACTTCTGAATCATCAGAATCTCAGTaGTCCCTTTCAGGTGATGCC +
Preference number: 4 (lower is better)
Translates to: PLLQVCTCTEHALHSTSESSESQ*SLSGDA
Trigger: GGCATCACCTGAAAGGGATCACTGAGATTCTGATGA...TTCAGAAGTGGAGTGAAGGGCGTGTTCTGTGCAGGTGCAGACCTGAAGGAGCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476477.6
ENST00000544365.5
CDS-3UTR GCA 90 bp AGCAGCTCACTGACGAAGACATTCCCCAAGGCATTGCGGGCAGAAGGTCTGTTCCTTCCTTCTGGATCCTaGTCTTCAGGGCATGCATCT +
Preference number: 4 (lower is better)
Translates to: SSSLTKTFPKALRAEGLFLPSGS*SSGHAS
Trigger: AGATGCATGCCCTGAAGAGCAGGATCCAGAAGGAAG...GAACAGACCTTCTGCCCGCAATGCCTTGGGGAATGTCTTCGTCAGTGAGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371520.5
ENST00000476477.6
CDS-3UTR GCA 90 bp CCACTTCTGAAGAGCAGGACACGCACTTGCCGGTCCTCCCGCAGCTGGGCCAGACCCAATTATTTTAAGTaGGTAAGTTCCTTAAGGCCA +
Preference number: 4 (lower is better)
Translates to: PLLKSRTRTCRSSRSWARPNYFK*VSSLRP
Trigger: TGGCCTTAAGGAACTTACGCACTTAAAATAATTGGG...TCTGGCCCAGCTGCGGGAGGACCGGCAAGTGCGTGTCCTGCTCTTCAGAAGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371520.5
ENST00000476477.6
ENST00000544365.5
CDS-3UTR GCA 90 bp CAGCTCACTGACGAAGACATTCCCCAAGGCATTGCGGGCAGAAGGTCTGTTCATCTGAAATCCAGCAGGTaGCCAGAGGAGTGTTTCCCA +
Preference number: 4 (lower is better)
Translates to: QLTDEDIPQGIAGRRSVHLKSSR*PEECFP
Trigger: TGGGAAACACTCCTCTGGGCACCTGCTGGATTTCAG...ATGAACAGACCTTCTGCCCGCAATGCCTTGGGGAATGTCTTCGTCAGTGAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476477.6
CDS-3UTR CCA 90 bp TTTAAACAATTTGTCCACGGTTATACAGCAAGTAACTGGCAGAGACTGGGATCTGCCAGGGCGCGCACTTaGATCTCTGAGCCCCCGGCC +
Preference number: 4 (lower is better)
Translates to: FKQFVHGYTASNWQRLGSARART*ISEPPA
Trigger: GGCCGGGGGCTCAGAGATCCAAGTGCGCGCCCTGGC...AGATCCCAGTCTCTGCCAGTTACTTGCTGTATAACCGTGGACAAATTGTTTAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000371522.9
ENST00000536120.5
CDS-3UTR CCA 90 bp AAAGCAAACCCAACCCTCGTGATTATTTCTAGCCAGGGTGAAGCTAAGGAAGGTATCTCAGTGATCCCTTaGTCCGGACCCGCCAGGGCG +
Preference number: 4 (lower is better)
Translates to: KANPTLVIISSQGEAKEGISVIP*SGPARA
Trigger: CGCCCTGGCGGGTCCGGACCAAGGGATCACTGAGAT...ACCTTCCTTAGCTTCACCCTGGCTAGAAATAATCACGAGGGTTGGGTTTGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358358.9
ENST00000371522.9
ENST00000536120.5
CDS-3UTR CCA 90 bp TCCAAAGCAAACCCAACCCTCGTGATTATTTCTAGCCAGGGTGAAGCTAAGGAAAGGCCCCGGAGTCGCTaGACAAACACCCCCACCTCT +
Preference number: 4 (lower is better)
Translates to: SKANPTLVIISSQGEAKERPRSR*TNTPTS
Trigger: AGAGGTGGGGGTGTTTGTCCAGCGACTCCGGGGCCT...TTCCTTAGCTTCACCCTGGCTAGAAATAATCACGAGGGTTGGGTTTGCTTTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358358.9
ENST00000371520.5
ENST00000371522.9
ENST00000536120.5
CDS-3UTR CCA 90 bp AACAATTTGTCCACGGTTATACAGCAAGTAACTGGCAGAGACTGGGATCTGCAGAGGCCCCGGAGTCGCTaGACAAACACCCCCACCTCT +
Preference number: 4 (lower is better)
Translates to: NNLSTVIQQVTGRDWDLQRPRSR*TNTPTS
Trigger: AGAGGTGGGGGTGTTTGTCCAGCGACTCCGGGGCCT...CTGCAGATCCCAGTCTCTGCCAGTTACTTGCTGTATAACCGTGGACAAATTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371522.9
ENST00000536120.5
CDS-3UTR CCA 90 bp AAGCTGAGGCCCAGAGCATTTAAACAATTTGTCCACGGTTATACAGCAAGTAACTGGGGCAGGATCTCCTaGGCCAGTGCTCGTGCCCGC +
Preference number: 4 (lower is better)
Translates to: KLRPRAFKQFVHGYTASNWGRIS*ASARAR
Trigger: GCGGGCACGAGCACTGGCCCAGGAGATCCTGCCCCA...GTTACTTGCTGTATAACCGTGGACAAATTGTTTAAATGCTCTGGGCCTCAGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371522.9
ENST00000536120.5
CDS-3UTR CCA 90 bp ACAGAACACGCCCTTCACTCCACTTCTGAAGAGCAGGACACGCACTTGCCGGTCCACAAATCTTCCTTCTaGATCCTGCTCTTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: TEHALHSTSEEQDTHLPVHKSSF*ILLFRA
Trigger: TGCCCTGAAGAGCAGGATCCAGAAGGAAGATTTGTG...GACCGGCAAGTGCGTGTCCTGCTCTTCAGAAGTGGAGTGAAGGGCGTGTTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371520.5
ENST00000476477.6
CDS-3UTR CCA 90 bp AACCCTTGCTCTTTCTGCCTCAGAGAGAAAGTGGAAGGACTTGTAAACTTTCAGTGGAGGCAGGAGGCCTaGGATCTGGGGAGCCTCTGC +
Preference number: 4 (lower is better)
Translates to: NPCSFCLREKVEGLVNFQWRQEA*DLGSLC
Trigger: GCAGAGGCTCCCCAGATCCCAGGCCTCCTGCCTCCA...CTGAAAGTTTACAAGTCCTTCCACTTTCTCTCTGAGGCAGAAAGAGCAAGGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371520.5
CDS-3UTR CCA 90 bp TCCAGAGACCAGGACAGACTCAAGGCCTGTCCTCATGGAACCTACAGCCCTTATGCACAGGATCAGAGATaGGGACAGGTTGACTCAGTC +
Preference number: 4 (lower is better)
Translates to: SRDQDRLKACPHGTYSPYAQDQR*GQVDSV
Trigger: GACTGAGTCAACCTGTCCCCATCTCTGATCCTGTGC...ATAAGGGCTGTAGGTTCCATGAGGACAGGCCTTGAGTCTGTCCTGGTCTCTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476477.6
CDS-3UTR CCA 90 bp CAGAACACGCCCTTCACTCCACTTCTGAAGAGCAGGACACGCACTTGCCGGTCCCTCCTCTGTGTGATTTaGTGTAACTCTGTCAACCTC +
Preference number: 4 (lower is better)
Translates to: QNTPFTPLLKSRTRTCRSLLCVI*CNSVNL
Trigger: GAGGTTGACAGAGTTACACCAAATCACACAGAGGAG...GGACCGGCAAGTGCGTGTCCTGCTCTTCAGAAGTGGAGTGAAGGGCGTGTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476477.6
ENST00000544365.5
CDS-3UTR CCA 90 bp CCGGTCCTCCCGCAGCTGGGCCAGAGTTTCCAGCAGCTCACTGACGAAGACATTTGTTTCCCAATCCTTTaGCCTTCAAAGACCCCTTAT +
Preference number: 4 (lower is better)
Translates to: PVLPQLGQSFQQLTDEDICFPIL*PSKTPY
Trigger: ATAAGGGGTCTTTGAAGGCCAAAGGATTGGGAAACA...AATGTCTTCGTCAGTGAGCTGCTGGAAACTCTGGCCCAGCTGCGGGAGGACCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476477.6
3UTR CAA 72 bp TCCAGCAGCTCACTGACGAAGACATTCCCCAAGGCATaGCGGGCAGAAGGTCTGTTCATCAGAATCTCAGTG +
Preference number: 4 (lower is better)
Translates to: SSSSLTKTFPKA*RAEGLFIRISV
Trigger: CACTGAGATTCTGATGAACAGACCTTCTGCCCGCAATGCCTTGGGGAATGTCTTCGTCAGTGAGCTGCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371520.5
ENST00000476477.6
ENST00000544365.5
CDS-3UTR TCA 90 bp GAAGGCAATCTGGCCACAAATCTTCCTTCTGGATCCTGCTCTTCAGGGCATGCATTTCCAGCAGCTCACTaGCGAAGACATTCCCCAAGG +
Preference number: 4 (lower is better)
Translates to: EGNLATNLPSGSCSSGHAFPAAH*RRHSPR
Trigger: CCTTGGGGAATGTCTTCGTCAGTGAGCTGCTGGAAA...TGCATGCCCTGAAGAGCAGGATCCAGAAGGAAGATTTGTGGCCAGATTGCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358358.9
ENST00000371520.5
ENST00000371522.9
ENST00000476477.6
ENST00000536120.5
CDS-3UTR TCA 90 bp AACAATTTGTCCACGGTTATACAGCAAGTAACTGGCAGAGACTGGGATCTGCAGTTCTGGGCCACAGCGTaGTTCACCAGCCCCAGTACG +
Preference number: 4 (lower is better)
Translates to: NNLSTVIQQVTGRDWDLQFWATA*FTSPST
Trigger: CGTACTGGGGCTGGTGAATCACGCTGTGGCCCAGAA...CTGCAGATCCCAGTCTCTGCCAGTTACTTGCTGTATAACCGTGGACAAATTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371522.9
ENST00000536120.5
CDS-3UTR TCA 90 bp TCCAAAGCAAACCCAACCCTCGTGATTATTTCTAGCCAGGGTGAAGCTAAGGAAGAGTCCGCTTCTCCCTaGAGGCTGCCATGCCCTCTA +
Preference number: 4 (lower is better)
Translates to: SKANPTLVIISSQGEAKEESASP*RLPCPL
Trigger: TAGAGGGCATGGCAGCCTTCAGGGAGAAGCGGACTC...TTCCTTAGCTTCACCCTGGCTAGAAATAATCACGAGGGTTGGGTTTGCTTTGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358358.9
ENST00000371520.5
ENST00000371522.9
ENST00000536120.5
CDS-3UTR TCA 90 bp GAAGGCAATCTGGCCACAAATCTTCCTTCTGGATCCTGCTCTTCAGGGCATGCAGGGGCTGAGAGCCAATaGTACCAAGACTCAGAGAGA +
Preference number: 4 (lower is better)
Translates to: EGNLATNLPSGSCSSGHAGAESQ*YQDSER
Trigger: TCTCTCTGAGTCTTGGTATCATTGGCTCTCAGCCCC...TGCATGCCCTGAAGAGCAGGATCCAGAAGGAAGATTTGTGGCCAGATTGCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371522.9
ENST00000536120.5
CDS-3UTR GCA 90 bp GAAGGCAATCTGGCCACAAATCTTCCTTCTGGATCCTGCTCTTCAGGGCATGCACATTCCCCAAGGCATTaGGGGCAGAAGGTCTGTTCA +
Preference number: 4 (lower is better)
Translates to: EGNLATNLPSGSCSSGHAHSPRH*GQKVCS
Trigger: TGAACAGACCTTCTGCCCGCAATGCCTTGGGGAATG...TGCATGCCCTGAAGAGCAGGATCCAGAAGGAAGATTTGTGGCCAGATTGCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358358.9
ENST00000371520.5
ENST00000371522.9
ENST00000476477.6
ENST00000536120.5
CDS-3UTR GCA 90 bp CAGTCATTTTATTTCCATCATCATCCTTGTGAAGAAATGGAAGTCTGGAGAGGTCTGGGCCAGTGCTCGTaGCCGCTGGTAGGCGGCGTC +
Preference number: 4 (lower is better)
Translates to: QSFYFHHHPCEEMEVWRGLGQCS*PLVGGV
Trigger: GACGCCGCCTACCAGCGGGCACGAGCACTGGCCCAG...ACCTCTCCAGACTTCCATTTCTTCACAAGGATGATGATGGAAATAAAATGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358358.9
ENST00000371520.5
ENST00000371522.9
ENST00000536120.5
CDS-3UTR GCA 90 bp AGAAGGTCTGTTCATCAGAATCTCAGTGATCCCTTTCAGGTGATGCCTCTGCACGGTCAATGGCTACTTTaGCCAGCCGCACGGCAATGG +
Preference number: 4 (lower is better)
Translates to: RRSVHQNLSDPFQVMPLHGQWLL*PAARQW
Trigger: CCATTGCCGTGCGGCTGGGCAAAGTAGCCATTGACC...GTGCAGAGGCATCACCTGAAAGGGATCACTGAGATTCTGATGAACAGACCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476477.6
CDS-3UTR GCA 90 bp CAGAACACGCCCTTCACTCCACTTCTGAAGAGCAGGACACGCACTTGCCGGTCCAAAATGGGGGTCATTTaGCAACAAATTTGGGAGTCC +
Preference number: 4 (lower is better)
Translates to: QNTPFTPLLKSRTRTCRSKMGVI*QQIWES
Trigger: GGACTCCCAAATTTGTTGGCAAATGACCCCCATTTT...GGACCGGCAAGTGCGTGTCCTGCTCTTCAGAAGTGGAGTGAAGGGCGTGTTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371520.5
ENST00000476477.6
CDS-3UTR GCA 90 bp AAGGCAATCTGGCCACAAATCTTCCTTCTGGATCCTGCTCTTCAGGGCATGCATAATGGCCATCCCAGATaGAATGTCCACCTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: KAIWPQIFLLDPALQGMHNGHPR*NVHLGQ
Trigger: CTGCCCCAGGTGGACATTGCATCTGGGATGGCCATT...ATGCATGCCCTGAAGAGCAGGATCCAGAAGGAAGATTTGTGGCCAGATTGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000536120.5
CDS-3UTR CCA 90 bp TTTAAACAATTTGTCCACGGTTATACAGCAAGTAACTGGCAGAGACTGGGATCTACGGCAATGGGGGCCTaGGGCAGGATCTCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: FKQFVHGYTASNWQRLGSTAMGA*GRISWA
Trigger: GGCCCAGGAGATCCTGCCCCAGGCCCCCATTGCCGT...AGATCCCAGTCTCTGCCAGTTACTTGCTGTATAACCGTGGACAAATTGTTTAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371522.9
CDS-3UTR CCA 90 bp GCAAACCCAACCCTCGTGATTATTTCTAGCCAGGGTGAAGCTAAGGAAGGTAGCGTAACTGGCAGAGACTaGGATCTGCAGTCTGACCCC +
Preference number: 4 (lower is better)
Translates to: ANPTLVIISSQGEAKEGSVTGRD*DLQSDP
Trigger: GGGGTCAGACTGCAGATCCCAGTCTCTGCCAGTTAC...GCTACCTTCCTTAGCTTCACCCTGGCTAGAAATAATCACGAGGGTTGGGTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371522.9
ENST00000536120.5
CDS-3UTR CCA 90 bp AAAGCAAACCCAACCCTCGTGATTATTTCTAGCCAGGGTGAAGCTAAGGAAGGTGATGCAATGTCCACCTaGGGCAGGATCTCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: KANPTLVIISSQGEAKEGDAMST*GRISWA
Trigger: GGCCCAGGAGATCCTGCCCCAGGTGGACATTGCATC...ACCTTCCTTAGCTTCACCCTGGCTAGAAATAATCACGAGGGTTGGGTTTGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536120.5
CDS-3UTR CCA 90 bp GATCCCTTTCAGGTGATGCCTCTGCACTCCTTCACTGCTTCTCTTCTGCCCAATCAATTGCTCCACCTATaGGCCAAGCGTCTGTTGCCT +
Preference number: 4 (lower is better)
Translates to: DPFQVMPLHSFTASLLPNQLLHL*AKRLLP
Trigger: AGGCAACAGACGCTTGGCCCATAGGTGGAGCAATTG...ATTGGGCAGAAGAGAAGCAGTGAAGGAGTGCAGAGGCATCACCTGAAAGGGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476477.6
ENST00000544365.5
CDS-3UTR CCA 90 bp ATTTGCTGTGTGCTGGCCTCTACTAGACACCGTGATTCCAGAGACCAGGACAGAAAAAAGCTCAGAGGGTaGGTTGGGAAGGCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: ICCVLASTRHRDSRDQDRKKLRG*VGKASW
Trigger: CCAGGAAGCCTTCCCAACCCACCCTCTGAGCTTTTT...TCTGTCCTGGTCTCTGGAATCACGGTGTCTAGTAGAGGCCAGCACACAGCAAAT
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000544365.5
CDS-3UTR CCA 90 bp CAGAGTTTCCAGCAGCTCACTGACGAAGACATTCCCCAAGGCATTGCGGGCAGATTAACTGCTTTGGAATaGCCAGGCTTGAACCCTGAG +
Preference number: 4 (lower is better)
Translates to: QSFQQLTDEDIPQGIAGRLTALE*PGLNPE
Trigger: CTCAGGGTTCAAGCCTGGCCATTCCAAAGCAGTTAA...TCTGCCCGCAATGCCTTGGGGAATGTCTTCGTCAGTGAGCTGCTGGAAACTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544365.5
CDS-3UTR CCA 90 bp TCCTACCTTTCAGGTGATGCCTCTGCACTCCTTCACTGCTTCTCTTCTGCCCAAGTAGAGGAGGGAGGATaGAAAGGTCAGCTTGTGGTG +
Preference number: 4 (lower is better)
Translates to: SYLSGDASALLHCFSSAQVEEGG*KGQLVV
Trigger: CACCACAAGCTGACCTTTCCATCCTCCCTCCTCTAC...TTGGGCAGAAGAGAAGCAGTGAAGGAGTGCAGAGGCATCACCTGAAAGGTAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542552.1
CDS-3UTR CCA 90 bp ATTTGCTGTGTGCTGGCCTCTACTAGACACCGTGATTCCAGAGACCAGGACAGACTTCAAATGAGCCCATaGGTAGAGGAGGGAGGATGG +
Preference number: 4 (lower is better)
Translates to: ICCVLASTRHRDSRDQDRLQMSP*VEEGGW
Trigger: CCATCCTCCCTCCTCTACCCATGGGCTCATTTGAAG...TCTGTCCTGGTCTCTGGAATCACGGTGTCTAGTAGAGGCCAGCACACAGCAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542552.1
CDS-3UTR TCA 90 bp AAGGCAATCTGGCCACAAATCTTCCTTCTGGATCCTGCTCTTCAGGGCATGCATTTTCCAGCAGCTCACTaGCGAAGACATTCCCCAAGG +
Preference number: 4 (lower is better)
Translates to: KAIWPQIFLLDPALQGMHFPAAH*RRHSPR
Trigger: CCTTGGGGAATGTCTTCGTCAGTGAGCTGCTGGAAA...ATGCATGCCCTGAAGAGCAGGATCCAGAAGGAAGATTTGTGGCCAGATTGCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000358358.9
ENST00000371520.5
ENST00000371522.9
ENST00000476477.6
ENST00000536120.5
CDS-3UTR TCA 90 bp GCAAACCCAACCCTCGTGATTATTTCTAGCCAGGGTGAAGCTAAGGAAGGTAGCTCTCAATCAGTCCCATaGCTGCCGAGGAAGCGATGT +
Preference number: 4 (lower is better)
Translates to: ANPTLVIISSQGEAKEGSSQSVP*LPRKRC
Trigger: ACATCGCTTCCTCGGCAGTCATGGGACTGATTGAGA...GCTACCTTCCTTAGCTTCACCCTGGCTAGAAATAATCACGAGGGTTGGGTTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358358.9
ENST00000371520.5
ENST00000536120.5
CDS-3UTR TCA 90 bp AAACAATTTGTCCACGGTTATACAGCAAGTAACTGGCAGAGACTGGGATCTGCATTCTGGGCCACAGCGTaGTTCACCAGCCCCAGTACG +
Preference number: 4 (lower is better)
Translates to: KQFVHGYTASNWQRLGSAFWATA*FTSPST
Trigger: CGTACTGGGGCTGGTGAATCACGCTGTGGCCCAGAA...TGCAGATCCCAGTCTCTGCCAGTTACTTGCTGTATAACCGTGGACAAATTGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371522.9
ENST00000536120.5
CDS-3UTR GCA 90 bp GATCCCTTTCAGGTGATGCCTCTGCACTCCTTCACTGCTTCTCTTCTGCCCAATGTTGACTCAGTCCCATaGCCAAGTCCGCAAATTAGG +
Preference number: 4 (lower is better)
Translates to: DPFQVMPLHSFTASLLPNVDSVP*PSPQIR
Trigger: CCTAATTTGCGGACTTGGGCATGGGACTGAGTCAAC...ATTGGGCAGAAGAGAAGCAGTGAAGGAGTGCAGAGGCATCACCTGAAAGGGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544365.5
CDS-3UTR CCA 90 bp TTTAAGTGCGTAAGTTCCTTAAGGCCAATCAGATTCTCTTCATTCACTCATTTGGCCAGGGCGCGCACTTaGATCTCTGAGCCCCCGGCC +
Preference number: 4 (lower is better)
Translates to: FKCVSSLRPIRFSSFTHLARART*ISEPPA
Trigger: GGCCGGGGGCTCAGAGATCCAAGTGCGCGCCCTGGC...CAAATGAGTGAATGAAGAGAATCTGATTGGCCTTAAGGAACTTACGCACTTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000371520.5
ENST00000476477.6
ENST00000542552.1
ENST00000544365.5
CDS-3UTR CCA 90 bp GCATTTAAACAATTTGTCCACGGTTATACAGCAAGTAACTGGCAGAGACTGGGAATCTCAGTGATCCCTTaGTCCGGACCCGCCAGGGCG +
Preference number: 4 (lower is better)
Translates to: AFKQFVHGYTASNWQRLGISVIP*SGPARA
Trigger: CGCCCTGGCGGGTCCGGACCAAGGGATCACTGAGAT...TCCCAGTCTCTGCCAGTTACTTGCTGTATAACCGTGGACAAATTGTTTAAATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371522.9
ENST00000536120.5
CDS-3UTR CCA 90 bp TTTAAACAATTTGTCCACGGTTATACAGCAAGTAACTGGCAGAGACTGGGATCTCGGTCCTCCCGCAGCTaGGCCAGAGTTTCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: FKQFVHGYTASNWQRLGSRSSRS*ARVSSS
Trigger: GCTGCTGGAAACTCTGGCCCAGCTGCGGGAGGACCG...AGATCCCAGTCTCTGCCAGTTACTTGCTGTATAACCGTGGACAAATTGTTTAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371522.9
ENST00000536120.5
CDS-3UTR CCA 90 bp AAAGCAAACCCAACCCTCGTGATTATTTCTAGCCAGGGTGAAGCTAAGGAAGGTACCAGCCCCAGTACGTaGGCCTCAGTTCCACTCAGT +
Preference number: 4 (lower is better)
Translates to: KANPTLVIISSQGEAKEGTSPST*ASVPLS
Trigger: ACTGAGTGGAACTGAGGCCCACGTACTGGGGCTGGT...ACCTTCCTTAGCTTCACCCTGGCTAGAAATAATCACGAGGGTTGGGTTTGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358358.9
ENST00000371520.5
ENST00000371522.9
ENST00000536120.5
CDS-3UTR CCA 90 bp AACAATTTGTCCACGGTTATACAGCAAGTAACTGGCAGAGACTGGGATCTGCAGACCAGCCCCAGTACGTaGGCCTCAGTTCCACTCAGT +
Preference number: 4 (lower is better)
Translates to: NNLSTVIQQVTGRDWDLQTSPST*ASVPLS
Trigger: ACTGAGTGGAACTGAGGCCCACGTACTGGGGCTGGT...CTGCAGATCCCAGTCTCTGCCAGTTACTTGCTGTATAACCGTGGACAAATTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371522.9
ENST00000536120.5
CDS-3UTR CCA 90 bp GGGTTCGCTCTTGGTGGTGTACACTCTGTGGGTTTACACAGATGCATAATGACAGACACGTATCTGCCTTaGCTTTGGCAGGCCCCCATT +
Preference number: 4 (lower is better)
Translates to: GFALGGVHSVGLHRCIMTDTYLP*LWQAPI
Trigger: AATGGGGGCCTGCCAAAGCCAAGGCAGATACGTGTC...TGTCATTATGCATCTGTGTAAACCCACAGAGTGTACACCACCAAGAGCGAACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542552.1
CDS-3UTR TCA 90 bp GCAAACCCAACCCTCGTGATTATTTCTAGCCAGGGTGAAGCTAAGGAAGGTAGCCAAACCCAACCCTCGTaGTTATTTCTAGCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: ANPTLVIISSQGEAKEGSQTQPS*LFLARV
Trigger: CACCCTGGCTAGAAATAATCACGAGGGTTGGGTTTG...GCTACCTTCCTTAGCTTCACCCTGGCTAGAAATAATCACGAGGGTTGGGTTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358358.9
ENST00000371520.5
ENST00000371522.9
ENST00000536120.5
CDS-3UTR TCA 90 bp GCTGTGTGCTGGCCTCTACTAGACACCGTGATTCCAGAGACCAGGACAGACTCATTAACACACTCCACTTaGTCGTTTTCTGCTTTGGCT +
Preference number: 4 (lower is better)
Translates to: AVCWPLLDTVIPETRTDSLTHST*SFSALA
Trigger: AGCCAAAGCAGAAAACGATCAAGTGGAGTGTGTTAA...TGAGTCTGTCCTGGTCTCTGGAATCACGGTGTCTAGTAGAGGCCAGCACACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542552.1
CDS-3UTR GCA 90 bp GAAGGCAATCTGGCCACAAATCTTCCTTCTGGATCCTGCTCTTCAGGGCATGCAAATCAGTCCCATGACTaGCGAGGAAGCGATGTCATT +
Preference number: 4 (lower is better)
Translates to: EGNLATNLPSGSCSSGHANQSHD*RGSDVI
Trigger: AATGACATCGCTTCCTCGGCAGTCATGGGACTGATT...TGCATGCCCTGAAGAGCAGGATCCAGAAGGAAGATTTGTGGCCAGATTGCCTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358358.9
ENST00000371520.5
ENST00000536120.5
CDS-3UTR GCA 90 bp AGCAGCTCACTGACGAAGACATTCCCCAAGGCATTGCGGGCAGAAGGTCTGTTCAAAATGGGGGTCATTTaGCAACAAATTTGGGAGTCC +
Preference number: 4 (lower is better)
Translates to: SSSLTKTFPKALRAEGLFKMGVI*QQIWES
Trigger: GGACTCCCAAATTTGTTGGCAAATGACCCCCATTTT...GAACAGACCTTCTGCCCGCAATGCCTTGGGGAATGTCTTCGTCAGTGAGCTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000371520.5
ENST00000476477.6
CDS-3UTR GCA 90 bp GAACACGCCCTTCACTCCACTTCTGAAGAGCAGGACACGCACTTGCCGGTCCTCCCCAATTATTTTAAGTaGGTAAGTTCCTTAAGGCCA +
Preference number: 4 (lower is better)
Translates to: EHALHSTSEEQDTHLPVLPNYFK*VSSLRP
Trigger: TGGCCTTAAGGAACTTACGCACTTAAAATAATTGGG...GAGGACCGGCAAGTGCGTGTCCTGCTCTTCAGAAGTGGAGTGAAGGGCGTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000371520.5
ENST00000476477.6
ENST00000544365.5
CDS-3UTR GCA 90 bp GCATTTAAACAATTTGTCCACGGTTATACAGCAAGTAACTGGCAGAGACTGGGAAGCCGCAATGGTGGGTaGAGGGAAGGCTGCGATGTC +
Preference number: 4 (lower is better)
Translates to: AFKQFVHGYTASNWQRLGSRNGG*REGCDV
Trigger: GACATCGCAGCCTTCCCTGCACCCACCATTGCGGCT...TCCCAGTCTCTGCCAGTTACTTGCTGTATAACCGTGGACAAATTGTTTAAATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371522.9
CDS-3UTR GCA 90 bp CAAAAGCTGAAGAGCCAGAACTCCCTCTCTGAGAGAACTGCCCTCGGTCATCCTTTGGGGAAACTTAACTaGTTTGGAATGGCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: QKLKSQNSLSERTALGHPLGKLN*FGMARL
Trigger: AAGCCTGGCCATTCCAAAGCAGTTAAGTTTCCCCAA...AGGATGACCGAGGGCAGTTCTCTCAGAGAGGGAGTTCTGGCTCTTCAGCTTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544365.5
CDS-3UTR CCA 90 bp TTTAAACAATTTGTCCACGGTTATACAGCAAGTAACTGGCAGAGACTGGGATCTAGGCCCCGGAGTCGCTaGACAAACACCCCCACCTCT +
Preference number: 4 (lower is better)
Translates to: FKQFVHGYTASNWQRLGSRPRSR*TNTPTS
Trigger: AGAGGTGGGGGTGTTTGTCCAGCGACTCCGGGGCCT...AGATCCCAGTCTCTGCCAGTTACTTGCTGTATAACCGTGGACAAATTGTTTAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371522.9
ENST00000536120.5
CDS-3UTR CCA 90 bp GCTGTGTGCTGGCCTCTACTAGACACCGTGATTCCAGAGACCAGGACAGACTCAATGATGAAGGCAATCTaGCCACAAATCTTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: AVCWPLLDTVIPETRTDSMMKAI*PQIFLL
Trigger: CAGAAGGAAGATTTGTGGCCAGATTGCCTTCATCAT...TGAGTCTGTCCTGGTCTCTGGAATCACGGTGTCTAGTAGAGGCCAGCACACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371520.5
ENST00000476477.6
CDS-3UTR CCA 90 bp AACAATTTGTCCACGGTTATACAGCAAGTAACTGGCAGAGACTGGGATCTGCAGGTAACTGGCAGAGACTaGGATCTGCAGTCTGACCCC +
Preference number: 4 (lower is better)
Translates to: NNLSTVIQQVTGRDWDLQVTGRD*DLQSDP
Trigger: GGGGTCAGACTGCAGATCCCAGTCTCTGCCAGTTAC...CTGCAGATCCCAGTCTCTGCCAGTTACTTGCTGTATAACCGTGGACAAATTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371522.9
ENST00000536120.5
CDS-3UTR CCA 90 bp AGAAGGTCTGTTCATCAGAATCTCAGTGATCCCTTTCAGGTGATGCCTCTGCACCAATTGCTCCACCTATaGGCCAAGCGTCTGTTGCCT +
Preference number: 4 (lower is better)
Translates to: RRSVHQNLSDPFQVMPLHQLLHL*AKRLLP
Trigger: AGGCAACAGACGCTTGGCCCATAGGTGGAGCAATTG...GTGCAGAGGCATCACCTGAAAGGGATCACTGAGATTCTGATGAACAGACCTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476477.6
ENST00000544365.5
CDS-3UTR CCA 90 bp TCCCTTTCAGGTGATGCCTCTGCACTCCTTCACTGCTTCTCTTCTGCCCAATTACAAGGCCTGTCCTCATaGAACCTACAGCCCTTATCA +
Preference number: 4 (lower is better)
Translates to: SLSGDASALLHCFSSAQLQGLSS*NLQPLS
Trigger: TGATAAGGGCTGTAGGTTCCATGAGGACAGGCCTTG...TAATTGGGCAGAAGAGAAGCAGTGAAGGAGTGCAGAGGCATCACCTGAAAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000476477.6
CDS-3UTR CCA 90 bp ATTTGCTGTGTGCTGGCCTCTACTAGACACCGTGATTCCAGAGACCAGGACAGACAAGGCCTGTCCTCATaGAACCTACAGCCTTCAAAT +
Preference number: 4 (lower is better)
Translates to: ICCVLASTRHRDSRDQDRQGLSS*NLQPSN
Trigger: ATTTGAAGGCTGTAGGTTCCATGAGGACAGGCCTTG...TCTGTCCTGGTCTCTGGAATCACGGTGTCTAGTAGAGGCCAGCACACAGCAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542552.1
CDS-3UTR TCA 90 bp GAAGGCAATCTGGCCACAAATCTTCCTTCTGGATCCTGCTCTTCAGGGCATGCACCATCATCATCCTTGTaGAGAAATGGAAGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: EGNLATNLPSGSCSSGHAPSSSL*RNGSLE
Trigger: CTCCAGACTTCCATTTCTTCACAAGGATGATGATGG...TGCATGCCCTGAAGAGCAGGATCCAGAAGGAAGATTTGTGGCCAGATTGCCTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358358.9
ENST00000371520.5
ENST00000371522.9
ENST00000536120.5
CDS-3UTR TCA 90 bp TCCCTTTCAGGTGATGCCTCTGCACTCCTTCACTGCTTCTCTTCTGCCCAATTATCATCAGAATCTCAGTaGTCCCTTTCAGGTGATGCC +
Preference number: 4 (lower is better)
Translates to: SLSGDASALLHCFSSAQLSSESQ*SLSGDA
Trigger: GGCATCACCTGAAAGGGATCACTGAGATTCTGATGA...TAATTGGGCAGAAGAGAAGCAGTGAAGGAGTGCAGAGGCATCACCTGAAAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476477.6
ENST00000544365.5
CDS-3UTR TCA 90 bp TCCATCCCCCTGGGTGAGTCATCTGTCTTATCACAGAACTCCAAACAGAAAGAACTCCATCCCCCTGGGTaGGTCATCTGTCTTATCACA +
Preference number: 4 (lower is better)
Translates to: SIPLGESSVLSQNSKQKELHPPG*VICLIT
Trigger: TGTGATAAGACAGATGACTCACCCAGGGGGATGGAG...TTCTTTCTGTTTGGAGTTCTGTGATAAGACAGATGACTCACCCAGGGGGATGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000544365.5
CDS-3UTR GCA 90 bp TCCAAAGCAAACCCAACCCTCGTGATTATTTCTAGCCAGGGTGAAGCTAAGGAACATTCCCCAAGGCATTaGGGGCAGAAGGTCTGTTCA +
Preference number: 4 (lower is better)
Translates to: SKANPTLVIISSQGEAKEHSPRH*GQKVCS
Trigger: TGAACAGACCTTCTGCCCGCAATGCCTTGGGGAATG...TTCCTTAGCTTCACCCTGGCTAGAAATAATCACGAGGGTTGGGTTTGCTTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358358.9
ENST00000371520.5
ENST00000371522.9
ENST00000536120.5
CDS-3UTR GCA 90 bp TTTAAACAATTTGTCCACGGTTATACAGCAAGTAACTGGCAGAGACTGGGATCTCCGCTCCTTCAGGTCTaGACCTGCACAGAACACGCC +
Preference number: 4 (lower is better)
Translates to: FKQFVHGYTASNWQRLGSPLLQV*TCTEHA
Trigger: GGCGTGTTCTGTGCAGGTGCAGACCTGAAGGAGCGG...AGATCCCAGTCTCTGCCAGTTACTTGCTGTATAACCGTGGACAAATTGTTTAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371522.9
ENST00000536120.5
CDS-3UTR GCA 90 bp GCAAACCCAACCCTCGTGATTATTTCTAGCCAGGGTGAAGCTAAGGAAGGTAGCAATCAGTCCCATGACTaGCGAGGAAGCGATGTCATT +
Preference number: 4 (lower is better)
Translates to: ANPTLVIISSQGEAKEGSNQSHD*RGSDVI
Trigger: AATGACATCGCTTCCTCGGCAGTCATGGGACTGATT...GCTACCTTCCTTAGCTTCACCCTGGCTAGAAATAATCACGAGGGTTGGGTTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358358.9
ENST00000371520.5
ENST00000536120.5
CDS-3UTR GCA 90 bp AAAGCAAACCCAACCCTCGTGATTATTTCTAGCCAGGGTGAAGCTAAGGAAGGTAATGGCCATCCCAGATaGAATGTCCACCTCCGTTCC +
Preference number: 4 (lower is better)
Translates to: KANPTLVIISSQGEAKEGNGHPR*NVHLRS
Trigger: GGAACGGAGGTGGACATTGCATCTGGGATGGCCATT...ACCTTCCTTAGCTTCACCCTGGCTAGAAATAATCACGAGGGTTGGGTTTGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358358.9
ENST00000371520.5
ENST00000371522.9
CDS-3UTR GCA 90 bp TCCAAAGCAAACCCAACCCTCGTGATTATTTCTAGCCAGGGTGAAGCTAAGGAAAATGGCCATCCCAGATaGAATGTCCACCTCCGTTCC +
Preference number: 4 (lower is better)
Translates to: SKANPTLVIISSQGEAKENGHPR*NVHLRS
Trigger: GGAACGGAGGTGGACATTGCATCTGGGATGGCCATT...TTCCTTAGCTTCACCCTGGCTAGAAATAATCACGAGGGTTGGGTTTGCTTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358358.9
ENST00000371520.5
ENST00000371522.9
CDS-3UTR GCA 90 bp AGACTCAAGGCCTGTCCTCATGGAACCTACAGCCTTCAAATGAGCCCATGGGTATCTGCACTCCTTCACTaGTTCTCTTCTGCCCAATTA +
Preference number: 4 (lower is better)
Translates to: RLKACPHGTYSLQMSPWVSALLH*FSSAQL
Trigger: TAATTGGGCAGAAGAGAAGCAGTGAAGGAGTGCAGA...TACCCATGGGCTCATTTGAAGGCTGTAGGTTCCATGAGGACAGGCCTTGAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542552.1
CDS-3UTR GCA 90 bp TCCTCCTCCATCCCCCTGGGTGAGTCATCTGTCTTATCACAGAACTCCAAACAGTCTGCACTCCTTCACTaGTTCTCTTCTGCCCAATTA +
Preference number: 4 (lower is better)
Translates to: SSSIPLGESSVLSQNSKQSALLH*FSSAQL
Trigger: TAATTGGGCAGAAGAGAAGCAGTGAAGGAGTGCAGA...CTGTTTGGAGTTCTGTGATAAGACAGATGACTCACCCAGGGGGATGGAGGAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544365.5
CDS-3UTR GCA 90 bp CCAGAGCATTTAAACAATTTGTCCACGGTTATACAGCAAGTAACTGGCAGAGACGGGTGCAGGGAAGGCTaGGATGTCATTCATCAGGCC +
Preference number: 4 (lower is better)
Translates to: PEHLNNLSTVIQQVTGRDGCREG*DVIHQA
Trigger: GGCCTGATGAATGACATCGCAGCCTTCCCTGCACCC...GTCTCTGCCAGTTACTTGCTGTATAACCGTGGACAAATTGTTTAAATGCTCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371522.9
CDS-3UTR GCA 90 bp AAACAATTTGTCCACGGTTATACAGCAAGTAACTGGCAGAGACTGGGATCTGCAGCAGAGACTGGGATCTaGAGTCTGACCCCTGACACA +
Preference number: 4 (lower is better)
Translates to: KQFVHGYTASNWQRLGSAAETGI*SLTPDT
Trigger: TGTGTCAGGGGTCAGACTGCAGATCCCAGTCTCTGC...TGCAGATCCCAGTCTCTGCCAGTTACTTGCTGTATAACCGTGGACAAATTGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371522.9
ENST00000536120.5
CDS-3UTR CCA 90 bp AAGGCAATCTGGCCACAAATCTTCCTTCTGGATCCTGCTCTTCAGGGCATGCATCACAAATCTTCCTTCTaGATCCTGCTCTTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: KAIWPQIFLLDPALQGMHHKSSF*ILLFRA
Trigger: TGCCCTGAAGAGCAGGATCCAGAAGGAAGATTTGTG...ATGCATGCCCTGAAGAGCAGGATCCAGAAGGAAGATTTGTGGCCAGATTGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358358.9
ENST00000371520.5
ENST00000371522.9
ENST00000476477.6
ENST00000536120.5
CDS-3UTR CCA 90 bp TTGTACATTTATATATTTGCTGTGTGCTGGCCTCTACTAGACACCGTGATTCCAACTGCACATTTACCTTaGTCCGGACCCGCCAGGGCG +
Preference number: 4 (lower is better)
Translates to: LYIYIFAVCWPLLDTVIPTAHLP*SGPARA
Trigger: CGCCCTGGCGGGTCCGGACCAAGGTAAATGTGCAGT...TGGAATCACGGTGTCTAGTAGAGGCCAGCACACAGCAAATATATAAATGTACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371520.5
CDS-3UTR TCA 90 bp CAGTCATTTTATTTCCATCATCATCCTTGTGAAGAAATGGAAGTCTGGAGAGGTTTCTGGGCCACAGCGTaGTTCACCAGCCCCAGTACG +
Preference number: 4 (lower is better)
Translates to: QSFYFHHHPCEEMEVWRGFWATA*FTSPST
Trigger: CGTACTGGGGCTGGTGAATCACGCTGTGGCCCAGAA...ACCTCTCCAGACTTCCATTTCTTCACAAGGATGATGATGGAAATAAAATGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358358.9
ENST00000371520.5
ENST00000371522.9
ENST00000536120.5
CDS-3UTR TCA 90 bp AAAGCAAACCCAACCCTCGTGATTATTTCTAGCCAGGGTGAAGCTAAGGAAGGTCAAACCCAACCCTCGTaGTTATTTCTAGCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: KANPTLVIISSQGEAKEGQTQPS*LFLARV
Trigger: CACCCTGGCTAGAAATAATCACGAGGGTTGGGTTTG...ACCTTCCTTAGCTTCACCCTGGCTAGAAATAATCACGAGGGTTGGGTTTGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358358.9
ENST00000371520.5
ENST00000371522.9
ENST00000536120.5
CDS-3UTR TCA 90 bp TCCAAAGCAAACCCAACCCTCGTGATTATTTCTAGCCAGGGTGAAGCTAAGGAACAAACCCAACCCTCGTaGTTATTTCTAGCCAGGGTG +
Preference number: 4 (lower is better)
Translates to: SKANPTLVIISSQGEAKEQTQPS*LFLARV
Trigger: CACCCTGGCTAGAAATAATCACGAGGGTTGGGTTTG...TTCCTTAGCTTCACCCTGGCTAGAAATAATCACGAGGGTTGGGTTTGCTTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358358.9
ENST00000371520.5
ENST00000371522.9
ENST00000536120.5
CDS-3UTR GCA 90 bp CAGTCATTTTATTTCCATCATCATCCTTGTGAAGAAATGGAAGTCTGGAGAGGTCCGCTCCTTCAGGTCTaGACCTGCACAGAACACGCC +
Preference number: 4 (lower is better)
Translates to: QSFYFHHHPCEEMEVWRGPLLQV*TCTEHA
Trigger: GGCGTGTTCTGTGCAGGTGCAGACCTGAAGGAGCGG...ACCTCTCCAGACTTCCATTTCTTCACAAGGATGATGATGGAAATAAAATGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358358.9
ENST00000371520.5
ENST00000371522.9
ENST00000536120.5
CDS-3UTR GCA 90 bp TCCAAAGCAAACCCAACCCTCGTGATTATTTCTAGCCAGGGTGAAGCTAAGGAACTTCCTTCTGGATCCTaGTCTTCAGGGCATGCATCT +
Preference number: 4 (lower is better)
Translates to: SKANPTLVIISSQGEAKELPSGS*SSGHAS
Trigger: AGATGCATGCCCTGAAGAGCAGGATCCAGAAGGAAG...TTCCTTAGCTTCACCCTGGCTAGAAATAATCACGAGGGTTGGGTTTGCTTTGGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358358.9
ENST00000371520.5
ENST00000371522.9
ENST00000536120.5
CDS-3UTR GCA 90 bp TATTTTAAGTGCGTAAGTTCCTTAAGGCCAATCAGATTCTCTTCATTCACTCATTGCCTAATCCTGGGCTaGGGGCTGGGGACTGGAGGC +
Preference number: 4 (lower is better)
Translates to: YFKCVSSLRPIRFSSFTHCLILG*GLGTGG
Trigger: GCCTCCAGTCCCCAGCCCGCAGCCCAGGATTAGGCA...ATGAGTGAATGAAGAGAATCTGATTGGCCTTAAGGAACTTACGCACTTAAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371520.5
CDS-3UTR GCA 90 bp CCAGAGCATTTAAACAATTTGTCCACGGTTATACAGCAAGTAACTGGCAGAGACGCAGAGACTGGGATCTaGAGTCTGACCCCTGACACA +
Preference number: 4 (lower is better)
Translates to: PEHLNNLSTVIQQVTGRDAETGI*SLTPDT
Trigger: TGTGTCAGGGGTCAGACTGCAGATCCCAGTCTCTGC...GTCTCTGCCAGTTACTTGCTGTATAACCGTGGACAAATTGTTTAAATGCTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371522.9
ENST00000536120.5
CDS-3UTR CCA 90 bp TTTAAACAATTTGTCCACGGTTATACAGCAAGTAACTGGCAGAGACTGGGATCTACCAGCCCCAGTACGTaGGCCTCAGTTCCACTCAGT +
Preference number: 4 (lower is better)
Translates to: FKQFVHGYTASNWQRLGSTSPST*ASVPLS
Trigger: ACTGAGTGGAACTGAGGCCCACGTACTGGGGCTGGT...AGATCCCAGTCTCTGCCAGTTACTTGCTGTATAACCGTGGACAAATTGTTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371522.9
ENST00000536120.5
CDS-3UTR CCA 90 bp CAGTCATTTTATTTCCATCATCATCCTTGTGAAGAAATGGAAGTCTGGAGAGGTCCACGGGAAAGCAGCTaGCTCTGCCTAATCCTGGGC +
Preference number: 4 (lower is better)
Translates to: QSFYFHHHPCEEMEVWRGPRESS*LCLILG
Trigger: GCCCAGGATTAGGCAGAGCCAGCTGCTTTCCCGTGG...ACCTCTCCAGACTTCCATTTCTTCACAAGGATGATGATGGAAATAAAATGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371520.5
CDS-3UTR CCA 90 bp TATTTTAAGTGCGTAAGTTCCTTAAGGCCAATCAGATTCTCTTCATTCACTCATTGGAACCTACAGCCTTaGTCCGGACCCGCCAGGGCG +
Preference number: 4 (lower is better)
Translates to: YFKCVSSLRPIRFSSFTHWNLQP*SGPARA
Trigger: CGCCCTGGCGGGTCCGGACCAAGGCTGTAGGTTCCA...ATGAGTGAATGAAGAGAATCTGATTGGCCTTAAGGAACTTACGCACTTAAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544365.5
CDS-3UTR TCA 90 bp CCAGAGCATTTAAACAATTTGTCCACGGTTATACAGCAAGTAACTGGCAGAGACTTTCCAGCAGCTCACTaGCGAAGACATTCCCCAAGG +
Preference number: 4 (lower is better)
Translates to: PEHLNNLSTVIQQVTGRDFPAAH*RRHSPR
Trigger: CCTTGGGGAATGTCTTCGTCAGTGAGCTGCTGGAAA...GTCTCTGCCAGTTACTTGCTGTATAACCGTGGACAAATTGTTTAAATGCTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000371522.9
ENST00000536120.5
CDS-3UTR TCA 90 bp GCATTTAAACAATTTGTCCACGGTTATACAGCAAGTAACTGGCAGAGACTGGGATCTCAATCAGTCCCATaGCTGCCGAGGAAGCGATGT +
Preference number: 4 (lower is better)
Translates to: AFKQFVHGYTASNWQRLGSQSVP*LPRKRC
Trigger: ACATCGCTTCCTCGGCAGTCATGGGACTGATTGAGA...TCCCAGTCTCTGCCAGTTACTTGCTGTATAACCGTGGACAAATTGTTTAAATGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536120.5
CDS-3UTR TCA 90 bp TACATTTATATATTTGCTGTGTGCTGGCCTCTACTAGACACCGTGATTCCAGAGCTCCTACCTTTCAGGTaGTGCCTCTGCACTCCTTCA +
Preference number: 4 (lower is better)
Translates to: YIYIFAVCWPLLDTVIPELLPFR*CLCTPS
Trigger: TGAAGGAGTGCAGAGGCATCACCTGAAAGGTAGGAG...CTCTGGAATCACGGTGTCTAGTAGAGGCCAGCACACAGCAAATATATAAATGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542552.1
CDS-3UTR GCA 90 bp AAGCTGAGGCCCAGAGCATTTAAACAATTTGTCCACGGTTATACAGCAAGTAACCATTCCCCAAGGCATTaGGGGCAGAAGGTCTGTTCA +
Preference number: 4 (lower is better)
Translates to: KLRPRAFKQFVHGYTASNHSPRH*GQKVCS
Trigger: TGAACAGACCTTCTGCCCGCAATGCCTTGGGGAATG...GTTACTTGCTGTATAACCGTGGACAAATTGTTTAAATGCTCTGGGCCTCAGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000371522.9
ENST00000536120.5
CDS-3UTR GCA 90 bp AACAATTTGTCCACGGTTATACAGCAAGTAACTGGCAGAGACTGGGATCTGCAGAATCAGTCCCATGACTaGCGAGGAAGCGATGTCATT +
Preference number: 4 (lower is better)
Translates to: NNLSTVIQQVTGRDWDLQNQSHD*RGSDVI
Trigger: AATGACATCGCTTCCTCGGCAGTCATGGGACTGATT...CTGCAGATCCCAGTCTCTGCCAGTTACTTGCTGTATAACCGTGGACAAATTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000536120.5
CDS-3UTR GCA 90 bp CAGTCATTTTATTTCCATCATCATCCTTGTGAAGAAATGGAAGTCTGGAGAGGTGGTCAATGGCTACTTTaGCCAGCCGCACGGCAATGG +
Preference number: 4 (lower is better)
Translates to: QSFYFHHHPCEEMEVWRGGQWLL*PAARQW
Trigger: CCATTGCCGTGCGGCTGGGCAAAGTAGCCATTGACC...ACCTCTCCAGACTTCCATTTCTTCACAAGGATGATGATGGAAATAAAATGACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358358.9
ENST00000371520.5
ENST00000371522.9
CDS-3UTR GCA 90 bp GCAAACCCAACCCTCGTGATTATTTCTAGCCAGGGTGAAGCTAAGGAAGGTAGCAAAATGGGGGTCATTTaGCAACAAATTTGGGAGTCC +
Preference number: 4 (lower is better)
Translates to: ANPTLVIISSQGEAKEGSKMGVI*QQIWES
Trigger: GGACTCCCAAATTTGTTGGCAAATGACCCCCATTTT...GCTACCTTCCTTAGCTTCACCCTGGCTAGAAATAATCACGAGGGTTGGGTTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000358358.9
ENST00000371520.5
ENST00000371522.9
ENST00000536120.5
CDS-3UTR GCA 90 bp TACACTGGGGTTCGCTCTTGGTGGTGTACACTCTGTGGGTTTACACAGATGCATTATATATTTGCTGTGTaGTGGCCTCTACTAGACACC +
Preference number: 4 (lower is better)
Translates to: YTGVRSWWCTLCGFTQMHYIFAV*WPLLDT
Trigger: GGTGTCTAGTAGAGGCCAGCACACAGCAAATATATA...ATGCATCTGTGTAAACCCACAGAGTGTACACCACCAAGAGCGAACCCCAGTGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542552.1
CDS-3UTR GCA 90 bp GTACATTTATATATTTGCTGTGTGCTGGCCTCTACTAGACACCGTGATTCCAGAACACGTTTCTCTCCTTaGCTCAACCTCGTGGCAGCA +
Preference number: 4 (lower is better)
Translates to: VHLYICCVLASTRHRDSRTRFSP*LNLVAA
Trigger: TGCTGCCACGAGGTTGAGGCAAGGAGAGAAACGTGT...TCTGGAATCACGGTGTCTAGTAGAGGCCAGCACACAGCAAATATATAAATGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542552.1
CDS-3UTR CCA 90 bp TCCAAAGCAAACCCAACCCTCGTGATTATTTCTAGCCAGGGTGAAGCTAAGGAAAGCACATCCCTTCAATaGCCATCCCAGATGCAATGT +
Preference number: 4 (lower is better)
Translates to: SKANPTLVIISSQGEAKESTSLQ*PSQMQC
Trigger: ACATTGCATCTGGGATGGCCATTGAAGGGATGTGCT...TTCCTTAGCTTCACCCTGGCTAGAAATAATCACGAGGGTTGGGTTTGCTTTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358358.9
ENST00000371520.5
ENST00000371522.9
ENST00000536120.5
CDS-3UTR CCA 90 bp AAAGCAAACCCAACCCTCGTGATTATTTCTAGCCAGGGTGAAGCTAAGGAAGGTAGCACATCCCTTCAATaGCCATCCCAGATGCAATGT +
Preference number: 4 (lower is better)
Translates to: KANPTLVIISSQGEAKEGSTSLQ*PSQMQC
Trigger: ACATTGCATCTGGGATGGCCATTGAAGGGATGTGCT...ACCTTCCTTAGCTTCACCCTGGCTAGAAATAATCACGAGGGTTGGGTTTGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358358.9
ENST00000371520.5
ENST00000371522.9
ENST00000536120.5
CDS-3UTR CCA 90 bp GTACATTTATATATTTGCTGTGTGCTGGCCTCTACTAGACACCGTGATTCCAGATATCTGCCTTGGCTTTaGCAGGCCCCCATTCTCCTT +
Preference number: 4 (lower is better)
Translates to: VHLYICCVLASTRHRDSRYLPWL*QAPILL
Trigger: AAGGAGAATGGGGGCCTGCCAAAGCCAAGGCAGATA...TCTGGAATCACGGTGTCTAGTAGAGGCCAGCACACAGCAAATATATAAATGTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542552.1
CDS-3UTR GCA 90 bp TTGTACATTTATATATTTGCTGTGTGCTGGCCTCTACTAGACACCGTGATTCCAAATGGCCATCCCAGATaGAATGTCCACCTCCGTTCC +
Preference number: 4 (lower is better)
Translates to: LYIYIFAVCWPLLDTVIPNGHPR*NVHLRS
Trigger: GGAACGGAGGTGGACATTGCATCTGGGATGGCCATT...TGGAATCACGGTGTCTAGTAGAGGCCAGCACACAGCAAATATATAAATGTACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371520.5
ENST00000476477.6
CDS-3UTR GCA 90 bp CAGATGCATAATGACACGTATCTGCCTTGGCTTTGGCAGGCCCCCATTCTCCTTCCCAATTATTTTAAGTaGGTAAGTTCCTTAAGGCCA +
Preference number: 4 (lower is better)
Translates to: QMHNDTYLPWLWQAPILLPNYFK*VSSLRP
Trigger: TGGCCTTAAGGAACTTACGCACTTAAAATAATTGGG...AAGGAGAATGGGGGCCTGCCAAAGCCAAGGCAGATACGTGTCATTATGCATCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542552.1
CDS-3UTR CCA 90 bp AAACAATTTGTCCACGGTTATACAGCAAGTAACTGGCAGAGACTGGGATCTGCAAGCACATCCCTTCAATaGCCATCCCAGATGCAATGT +
Preference number: 4 (lower is better)
Translates to: KQFVHGYTASNWQRLGSASTSLQ*PSQMQC
Trigger: ACATTGCATCTGGGATGGCCATTGAAGGGATGTGCT...TGCAGATCCCAGTCTCTGCCAGTTACTTGCTGTATAACCGTGGACAAATTGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371522.9
ENST00000536120.5
CDS-3UTR CCA 90 bp ATTTGCTGTGTGCTGGCCTCTACTAGACACCGTGATTCCAGAGACCAGGACAGAAGGGTCACAGCAAAATaGAGTGGAAAATACAATTCA +
Preference number: 4 (lower is better)
Translates to: ICCVLASTRHRDSRDQDRRVTAK*SGKYNS
Trigger: TGAATTGTATTTTCCACTCCATTTTGCTGTGACCCT...TCTGTCCTGGTCTCTGGAATCACGGTGTCTAGTAGAGGCCAGCACACAGCAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000542552.1
CDS-3UTR GCA 90 bp TCCAAAGCAAACCCAACCCTCGTGATTATTTCTAGCCAGGGTGAAGCTAAGGAAAAAATGGGGGTCATTTaGCAACAAATTTGGGAGTCC +
Preference number: 4 (lower is better)
Translates to: SKANPTLVIISSQGEAKEKMGVI*QQIWES
Trigger: GGACTCCCAAATTTGTTGGCAAATGACCCCCATTTT...TTCCTTAGCTTCACCCTGGCTAGAAATAATCACGAGGGTTGGGTTTGCTTTGGA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000358358.9
ENST00000371520.5
ENST00000371522.9
ENST00000536120.5
CDS-3UTR GCA 90 bp TCCATCCCCCTGGGTGAGTCATCTGTCTTATCACAGAACTCCAAACAGAAAGAATATATATTTGCTGTGTaGTGGCCTCTACTAGACACC +
Preference number: 4 (lower is better)
Translates to: SIPLGESSVLSQNSKQKEYIFAV*WPLLDT
Trigger: GGTGTCTAGTAGAGGCCAGCACACAGCAAATATATA...TTCTTTCTGTTTGGAGTTCTGTGATAAGACAGATGACTCACCCAGGGGGATGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000544365.5
CDS-3UTR CCA 90 bp GTACATTTATATATTTGCTGTGTGCTGGCCTCTACTAGACACCGTGATTCCAGAAGCACATCCCTTCAATaGCCATCCCAGATGCAATGT +
Preference number: 4 (lower is better)
Translates to: VHLYICCVLASTRHRDSRSTSLQ*PSQMQC
Trigger: ACATTGCATCTGGGATGGCCATTGAAGGGATGTGCT...TCTGGAATCACGGTGTCTAGTAGAGGCCAGCACACAGCAAATATATAAATGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371520.5
ENST00000476477.6
CDS-3UTR CCA 90 bp TCCAAAGCAAACCCAACCCTCGTGATTATTTCTAGCCAGGGTGAAGCTAAGGAAATGATGAAGGCAATCTaGCCACAAATCTTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: SKANPTLVIISSQGEAKEMMKAI*PQIFLL
Trigger: CAGAAGGAAGATTTGTGGCCAGATTGCCTTCATCAT...TTCCTTAGCTTCACCCTGGCTAGAAATAATCACGAGGGTTGGGTTTGCTTTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358358.9
ENST00000371520.5
ENST00000371522.9
ENST00000536120.5
CDS-3UTR CCA 90 bp TTTAAGTGCGTAAGTTCCTTAAGGCCAATCAGATTCTCTTCATTCACTCATTTGTTCACCTATACTCCCTaGCCCTACACAGGCACAGCC +
Preference number: 4 (lower is better)
Translates to: FKCVSSLRPIRFSSFTHLFTYTP*PYTGTA
Trigger: GGCTGTGCCTGTGTAGGGCCAGGGAGTATAGGTGAA...CAAATGAGTGAATGAAGAGAATCTGATTGGCCTTAAGGAACTTACGCACTTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542552.1
CDS-3UTR TCA 90 bp TTTAAGTGCGTAAGTTCCTTAAGGCCAATCAGATTCTCTTCATTCACTCATTTGTTTCCAGCAGCTCACTaGCGAAGACATTCCCCAAGG +
Preference number: 4 (lower is better)
Translates to: FKCVSSLRPIRFSSFTHLFPAAH*RRHSPR
Trigger: CCTTGGGGAATGTCTTCGTCAGTGAGCTGCTGGAAA...CAAATGAGTGAATGAAGAGAATCTGATTGGCCTTAAGGAACTTACGCACTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000371520.5
ENST00000476477.6
ENST00000544365.5
CDS-3UTR GCA 90 bp CAGTCATTTTATTTCCATCATCATCCTTGTGAAGAAATGGAAGTCTGGAGAGGTCTTCCTTCTGGATCCTaGTCTTCAGGGCATGCATCT +
Preference number: 4 (lower is better)
Translates to: QSFYFHHHPCEEMEVWRGLPSGS*SSGHAS
Trigger: AGATGCATGCCCTGAAGAGCAGGATCCAGAAGGAAG...ACCTCTCCAGACTTCCATTTCTTCACAAGGATGATGATGGAAATAAAATGACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358358.9
ENST00000371520.5
ENST00000371522.9
ENST00000536120.5
CDS-3UTR CCA 90 bp TTTAAACAATTTGTCCACGGTTATACAGCAAGTAACTGGCAGAGACTGGGATCTCACAAATCTTCCTTCTaGATCCTGCTCTTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: FKQFVHGYTASNWQRLGSHKSSF*ILLFRA
Trigger: TGCCCTGAAGAGCAGGATCCAGAAGGAAGATTTGTG...AGATCCCAGTCTCTGCCAGTTACTTGCTGTATAACCGTGGACAAATTGTTTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371522.9
ENST00000536120.5
CDS-3UTR CCA 90 bp AGAGAGAAAGTGGAAGGACTTGTAAACTTTCAGGTGATGCCTCTGCACTCCTTCATCCTTGTGAAGAAATaGAAGTCTGGAGAGGTGAAA +
Preference number: 4 (lower is better)
Translates to: REKVEGLVNFQVMPLHSFILVKK*KSGEVK
Trigger: TTTCACCTCTCCAGACTTCCATTTCTTCACAAGGAT...GAAGGAGTGCAGAGGCATCACCTGAAAGTTTACAAGTCCTTCCACTTTCTCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371520.5
CDS-3UTR CCA 90 bp TCCAAAGCAAACCCAACCCTCGTGATTATTTCTAGCCAGGGTGAAGCTAAGGAAATCCTTGTGAAGAAATaGAAGTCTGGAGAGGTGAAA +
Preference number: 4 (lower is better)
Translates to: SKANPTLVIISSQGEAKEILVKK*KSGEVK
Trigger: TTTCACCTCTCCAGACTTCCATTTCTTCACAAGGAT...TTCCTTAGCTTCACCCTGGCTAGAAATAATCACGAGGGTTGGGTTTGCTTTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358358.9
ENST00000371520.5
ENST00000371522.9
ENST00000536120.5
CDS-3UTR CCA 90 bp GCATTTAAACAATTTGTCCACGGTTATACAGCAAGTAACTGGCAGAGACTGGGATATACAGCAAGTAACTaGCAGAGACTGGGATCTGCA +
Preference number: 4 (lower is better)
Translates to: AFKQFVHGYTASNWQRLGYTASN*QRLGSA
Trigger: TGCAGATCCCAGTCTCTGCCAGTTACTTGCTGTATA...TCCCAGTCTCTGCCAGTTACTTGCTGTATAACCGTGGACAAATTGTTTAAATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371522.9
ENST00000536120.5
CDS-3UTR CCA 90 bp TTTAAGTGCGTAAGTTCCTTAAGGCCAATCAGATTCTCTTCATTCACTCATTTGGGAAAGGTCAGCTTGTaGTGGAGAACCTTAGTGCCC +
Preference number: 4 (lower is better)
Translates to: FKCVSSLRPIRFSSFTHLGKVSL*WRTLVP
Trigger: GGGCACTAAGGTTCTCCACCACAAGCTGACCTTTCC...CAAATGAGTGAATGAAGAGAATCTGATTGGCCTTAAGGAACTTACGCACTTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542552.1
CDS-3UTR GCA 90 bp CCAGAGCATTTAAACAATTTGTCCACGGTTATACAGCAAGTAACTGGCAGAGACAAAATGGGGGTCATTTaGCAACAAATTTGGGAGTCC +
Preference number: 4 (lower is better)
Translates to: PEHLNNLSTVIQQVTGRDKMGVI*QQIWES
Trigger: GGACTCCCAAATTTGTTGGCAAATGACCCCCATTTT...GTCTCTGCCAGTTACTTGCTGTATAACCGTGGACAAATTGTTTAAATGCTCTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371522.9
ENST00000536120.5
CDS-3UTR GCA 90 bp TTTAAGTGCGTAAGTTCCTTAAGGCCAATCAGATTCTCTTCATTCACTCATTTGCTTCCTTCTGGATCCTaGTCTTCAGGGCATGCATCT +
Preference number: 4 (lower is better)
Translates to: FKCVSSLRPIRFSSFTHLLPSGS*SSGHAS
Trigger: AGATGCATGCCCTGAAGAGCAGGATCCAGAAGGAAG...CAAATGAGTGAATGAAGAGAATCTGATTGGCCTTAAGGAACTTACGCACTTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371520.5
ENST00000476477.6
CDS-3UTR GCA 90 bp AAAGCAAACCCAACCCTCGTGATTATTTCTAGCCAGGGTGAAGCTAAGGAAGGTCCCAATTATTTTAAGTaGGTAAGTTCCTTAAGGCCA +
Preference number: 4 (lower is better)
Translates to: KANPTLVIISSQGEAKEGPNYFK*VSSLRP
Trigger: TGGCCTTAAGGAACTTACGCACTTAAAATAATTGGG...ACCTTCCTTAGCTTCACCCTGGCTAGAAATAATCACGAGGGTTGGGTTTGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371520.5
CDS-3UTR GCA 90 bp GCATTTAAACAATTTGTCCACGGTTATACAGCAAGTAACTGGCAGAGACTGGGAGACATCTCTAATGAGTaGCTGATAACTGAGAGAGGT +
Preference number: 4 (lower is better)
Translates to: AFKQFVHGYTASNWQRLGDISNE*LITERG
Trigger: ACCTCTCTCAGTTATCAGGCACTCATTAGAGATGTC...TCCCAGTCTCTGCCAGTTACTTGCTGTATAACCGTGGACAAATTGTTTAAATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371522.9
ENST00000536120.5
CDS-3UTR CCA 90 bp CAGTCATTTTATTTCCATCATCATCCTTGTGAAGAAATGGAAGTCTGGAGAGGTCACAAATCTTCCTTCTaGATCCTGCTCTTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: QSFYFHHHPCEEMEVWRGHKSSF*ILLFRA
Trigger: TGCCCTGAAGAGCAGGATCCAGAAGGAAGATTTGTG...ACCTCTCCAGACTTCCATTTCTTCACAAGGATGATGATGGAAATAAAATGACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358358.9
ENST00000371520.5
ENST00000371522.9
ENST00000536120.5
CDS-3UTR CCA 90 bp GCATTTAAACAATTTGTCCACGGTTATACAGCAAGTAACTGGCAGAGACTGGGAATGATGAAGGCAATCTaGCCACAAATCTTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: AFKQFVHGYTASNWQRLGMMKAI*PQIFLL
Trigger: CAGAAGGAAGATTTGTGGCCAGATTGCCTTCATCAT...TCCCAGTCTCTGCCAGTTACTTGCTGTATAACCGTGGACAAATTGTTTAAATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371522.9
ENST00000536120.5
CDS-3UTR CCA 90 bp AAGCTGAGGCCCAGAGCATTTAAACAATTTGTCCACGGTTATACAGCAAGTAACATGATGAAGGCAATCTaGCCACAAATCTTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: KLRPRAFKQFVHGYTASNMMKAI*PQIFLL
Trigger: CAGAAGGAAGATTTGTGGCCAGATTGCCTTCATCAT...GTTACTTGCTGTATAACCGTGGACAAATTGTTTAAATGCTCTGGGCCTCAGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371522.9
ENST00000536120.5
CDS-3UTR CCA 90 bp AAACAATTTGTCCACGGTTATACAGCAAGTAACTGGCAGAGACTGGGATCTGCAATCCTTGTGAAGAAATaGAAGTCTGGAGAGGTGAAA +
Preference number: 4 (lower is better)
Translates to: KQFVHGYTASNWQRLGSAILVKK*KSGEVK
Trigger: TTTCACCTCTCCAGACTTCCATTTCTTCACAAGGAT...TGCAGATCCCAGTCTCTGCCAGTTACTTGCTGTATAACCGTGGACAAATTGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371522.9
ENST00000536120.5
3UTR CAA 72 bp AAAGGTAACAGCAATTGTCAAAACTTGAAAGCATGCTaGGGGAAACTTAACTGCTTTGGAATGGCCAGGCTT +
Preference number: 4 (lower is better)
Translates to: KGNSNCQNLKAC*GKLNCFGMARL
Trigger: AAGCCTGGCCATTCCAAAGCAGTTAAGTTTCCCCAAGCATGCTTTCAAGTTTTGACAATTGCTGTTACCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544365.5
CDS-3UTR TCA 90 bp CAGTCATTTTATTTCCATCATCATCCTTGTGAAGAAATGGAAGTCTGGAGAGGTCCATCATCATCCTTGTaGAGAAATGGAAGTCTGGAG +
Preference number: 4 (lower is better)
Translates to: QSFYFHHHPCEEMEVWRGPSSSL*RNGSLE
Trigger: CTCCAGACTTCCATTTCTTCACAAGGATGATGATGG...ACCTCTCCAGACTTCCATTTCTTCACAAGGATGATGATGGAAATAAAATGACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358358.9
ENST00000371520.5
ENST00000371522.9
ENST00000536120.5
CDS-3UTR GCA 90 bp TTGTACATTTATATATTTGCTGTGTGCTGGCCTCTACTAGACACCGTGATTCCATATATATTTGCTGTGTaGTGGCCTCTACTAGACACC +
Preference number: 4 (lower is better)
Translates to: LYIYIFAVCWPLLDTVIPYIFAV*WPLLDT
Trigger: GGTGTCTAGTAGAGGCCAGCACACAGCAAATATATA...TGGAATCACGGTGTCTAGTAGAGGCCAGCACACAGCAAATATATAAATGTACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000371520.5
ENST00000476477.6
ENST00000542552.1
ENST00000544365.5
CDS-3UTR GCA 90 bp TTGTACATTTATATATTTGCTGTGTGCTGGCCTCTACTAGACACCGTGATTCCAGTGGGTTTACACAGATaGATAATGACACGTATCTGC +
Preference number: 4 (lower is better)
Translates to: LYIYIFAVCWPLLDTVIPVGLHR*IMTRIC
Trigger: GCAGATACGTGTCATTATGCATCTGTGTAAACCCAC...TGGAATCACGGTGTCTAGTAGAGGCCAGCACACAGCAAATATATAAATGTACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542552.1
CDS TCA 90 bp GTGCCCAGCTTGGTCCGGACCCGCCAGGGCGCGCACTTGGATCTCTaGGCCCCCGGCCGCCCCGTCGGAAGCGCAGCCGCGGGCCCGAAG +
Preference number: 5 (lower is better)
Translates to: VPSLVRTRQGAHLDL*APGRPVGSAAAGPK
Trigger: CTTCGGGCCCGCGGCTGCGCTTCCGACGGGGCGGCCGGGGGCTCAGAGATCCAAGTGCGCGCCCTGGCGGGTCCGGACCAAGCTGGGCAC
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542552.1
CDS TCA 90 bp CCTACAGCCTTGGTCCGGACCCGCCAGGGCGCGCACTTGGATCTCTaGGCCCCCGGCCGCCCCGTCGGAAGCGCAGCCGCGGGCCCGAAG +
Preference number: 5 (lower is better)
Translates to: PTALVRTRQGAHLDL*APGRPVGSAAAGPK
Trigger: CTTCGGGCCCGCGGCTGCGCTTCCGACGGGGCGGCCGGGGGCTCAGAGATCCAAGTGCGCGCCCTGGCGGGTCCGGACCAAGGCTGTAGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474789.1
ENST00000544365.5
CDS TCA 90 bp AGTGATCCCTTGGTCCGGACCCGCCAGGGCGCGCACTTGGATCTCTaGGCCCCCGGCCGCCCCGTCGGAAGCGCAGCCGCGGGCCCGAAG +
Preference number: 5 (lower is better)
Translates to: SDPLVRTRQGAHLDL*APGRPVGSAAAGPK
Trigger: CTTCGGGCCCGCGGCTGCGCTTCCGACGGGGCGGCCGGGGGCTCAGAGATCCAAGTGCGCGCCCTGGCGGGTCCGGACCAAGGGATCACT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000358358.9
ENST00000371522.9
ENST00000460612.5
ENST00000467988.2
ENST00000495920.5
ENST00000536120.5
CDS TCA 90 bp AGCTTTGTCTTGGTCCGGACCCGCCAGGGCGCGCACTTGGATCTCTaGGCCCCCGGCCGCCCCGTCGGAAGCGCAGCCGCGGGCCCGAAG +
Preference number: 5 (lower is better)
Translates to: SFVLVRTRQGAHLDL*APGRPVGSAAAGPK
Trigger: CTTCGGGCCCGCGGCTGCGCTTCCGACGGGGCGGCCGGGGGCTCAGAGATCCAAGTGCGCGCCCTGGCGGGTCCGGACCAAGACAAAGCT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476477.6
CDS CCA 90 bp GGGTCCTCAGCTTTGTCTTGGTCCGGACCCGCCAGGGCGCGCACTTaGATCTCTGAGCCCCCGGCCGCCCCGTCGGAAGCGCAGCCGCGG +
Preference number: 5 (lower is better)
Translates to: GSSALSWSGPARART*ISEPPAAPSEAQPR
Trigger: CCGCGGCTGCGCTTCCGACGGGGCGGCCGGGGGCTCAGAGATCCAAGTGCGCGCCCTGGCGGGTCCGGACCAAGACAAAGCTGAGGACCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476477.6
CDS TCA 90 bp ACATTTACCTTGGTCCGGACCCGCCAGGGCGCGCACTTGGATCTCTaGGCCCCCGGCCGCCCCGTCGGAAGCGCAGCCGCGGGCCCGAAG +
Preference number: 5 (lower is better)
Translates to: TFTLVRTRQGAHLDL*APGRPVGSAAAGPK
Trigger: CTTCGGGCCCGCGGCTGCGCTTCCGACGGGGCGGCCGGGGGCTCAGAGATCCAAGTGCGCGCCCTGGCGGGTCCGGACCAAGGTAAATGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371520.5
CDS CCA 90 bp TCATGGAACCTACAGCCTTGGTCCGGACCCGCCAGGGCGCGCACTTaGATCTCTGAGCCCCCGGCCGCCCCGTCGGAAGCGCAGCCGCGG +
Preference number: 5 (lower is better)
Translates to: SWNLQPWSGPARART*ISEPPAAPSEAQPR
Trigger: CCGCGGCTGCGCTTCCGACGGGGCGGCCGGGGGCTCAGAGATCCAAGTGCGCGCCCTGGCGGGTCCGGACCAAGGCTGTAGGTTCCATGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474789.1
ENST00000544365.5
CDS GCA 90 bp GCCTGCCGGTCCCCCGCTGCCTCCGGCCTAGTCCCAGTCGCGTCATaGGCCGCCCCGGAACTGCACATTTACCTTGGTCCGGACCCGCCA +
Preference number: 5 (lower is better)
Translates to: ACRSPAASGLVPVAS*AAPELHIYLGPDPP
Trigger: TGGCGGGTCCGGACCAAGGTAAATGTGCAGTTCCGGGGCGGCGCATGACGCGACTGGGACTAGGCCGGAGGCAGCGGGGGACCGGCAGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371520.5
CDS CCA 90 bp AGAATCTCAGTGATCCCTTGGTCCGGACCCGCCAGGGCGCGCACTTaGATCTCTGAGCCCCCGGCCGCCCCGTCGGAAGCGCAGCCGCGG +
Preference number: 5 (lower is better)
Translates to: RISVIPWSGPARART*ISEPPAAPSEAQPR
Trigger: CCGCGGCTGCGCTTCCGACGGGGCGGCCGGGGGCTCAGAGATCCAAGTGCGCGCCCTGGCGGGTCCGGACCAAGGGATCACTGAGATTCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000358358.9
ENST00000371522.9
ENST00000460612.5
ENST00000467988.2
ENST00000495920.5
ENST00000536120.5
CDS CCA 90 bp GGAACTGCACATTTACCTTGGTCCGGACCCGCCAGGGCGCGCACTTaGATCTCTGAGCCCCCGGCCGCCCCGTCGGAAGCGCAGCCGCGG +
Preference number: 5 (lower is better)
Translates to: GTAHLPWSGPARART*ISEPPAAPSEAQPR
Trigger: CCGCGGCTGCGCTTCCGACGGGGCGGCCGGGGGCTCAGAGATCCAAGTGCGCGCCCTGGCGGGTCCGGACCAAGGTAAATGTGCAGTTCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371520.5
CDS GCA 90 bp ACCTGCCGGTCCCCCGCTGCCTCCGGCCTAGTCCCAGTCGCGTCATaGGCCGCCCCGGAACTGCACATTTACCTTGGTCCGGACCCGCCA +
Preference number: 5 (lower is better)
Translates to: TCRSPAASGLVPVAS*AAPELHIYLGPDPP
Trigger: TGGCGGGTCCGGACCAAGGTAAATGTGCAGTTCCGGGGCGGCGCATGACGCGACTGGGACTAGGCCGGAGGCAGCGGGGGACCGGCAGGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544531.5
CDS GCA 90 bp CTCAAGGCCTGTCCTCATGGAACCTACAGCCTGCCGGTCCCCCGCTaGCTCCGGCCTAGTCCCAGTCGCGTCATGCGCCGCCCCGGAACT +
Preference number: 5 (lower is better)
Translates to: LKACPHGTYSLPVPR*LRPSPSRVMRRPGT
Trigger: AGTTCCGGGGCGGCGCATGACGCGACTGGGACTAGGCCGGAGGCAGCGGGGGACCGGCAGGCTGTAGGTTCCATGAGGACAGGCCTTGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371520.5
CDS GCA 90 bp GGAGGGACTGGGGATCGAATCCTTCAACGCACTGAGCGGCCCACCTaGCGGTCCCCCGCTGCCTCCGGCCTAGTCCCAGTCGCGTCATGC +
Preference number: 5 (lower is better)
Translates to: GGTGDRILQRTERPT*RSPAASGLVPVASC
Trigger: GCATGACGCGACTGGGACTAGGCCGGAGGCAGCGGGGGACCGGCAGGTGGGCCGCTCAGTGCGTTGAAGGATTCGATCCCCAGTCCCTCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544531.5
CDS TCA 90 bp CTAGAACTGGGAGGGAGGGACTGGGGATCGAATCCTTCAACGCACTaGGCGGCCCACCTGCCGGTCCCCCGCTGCCTCCGGCCTAGTCCC +
Preference number: 5 (lower is better)
Translates to: LELGGRDWGSNPSTH*AAHLPVPRCLRPSP
Trigger: GGGACTAGGCCGGAGGCAGCGGGGGACCGGCAGGTGGGCCGCTCAGTGCGTTGAAGGATTCGATCCCCAGTCCCTCCCTCCCAGTTCTAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000480312.6
ENST00000544531.5
CDS TCA 90 bp GGGAGTGAAGGTGCTTCTCCGGCCCTGCACCGTCTCGGCTCCCGCTaGGAGCTCGCAGTTCCGGCGTCGGGCGAAGCCTTCGCCAATTGC +
Preference number: 5 (lower is better)
Translates to: GSEGASPALHRLGSR*ELAVPASGEAFANC
Trigger: GCAATTGGCGAAGGCTTCGCCCGACGCCGGAACTGCGAGCTCTCAGCGGGAGCCGAGACGGTGCAGGGCCGGAGAAGCACCTTCACTCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000476477.6
ENST00000542552.1
ENST00000544365.5
CDS CCA 90 bp AGTCCCAGTCGCGTCATGCGCCGCCCCGGAACTGCACATTTACCTTaGTCCGGACCCGCCAGGGCGCGCACTTGGATCTCTGAGCCCCCG +
Preference number: 5 (lower is better)
Translates to: SPSRVMRRPGTAHLP*SGPARARTWISEPP
Trigger: CGGGGGCTCAGAGATCCAAGTGCGCGCCCTGGCGGGTCCGGACCAAGGTAAATGTGCAGTTCCGGGGCGGCGCATGACGCGACTGGGACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371520.5
CDS CCA 90 bp CGCAGTTCCGGCGTCGGGCGAAGCCTTCGCCAATTGCTCCACCTATaGGCCAAGCGTCTGTTGCCTCCTTCCGCACCTCCCGGGGACAGG +
Preference number: 5 (lower is better)
Translates to: RSSGVGRSLRQLLHL*AKRLLPPSAPPGDR
Trigger: CCTGTCCCCGGGAGGTGCGGAAGGAGGCAACAGACGCTTGGCCCATAGGTGGAGCAATTGGCGAAGGCTTCGCCCGACGCCGGAACTGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476477.6
ENST00000544365.5
CDS GCA 90 bp GAGACCAGGACAGACTCAAGGCCTGTCCTCATGGAACCTACAGCCTaGCGGTCCCCCGCTGCCTCCGGCCTAGTCCCAGTCGCGTCATGC +
Preference number: 5 (lower is better)
Translates to: ETRTDSRPVLMEPTA*RSPAASGLVPVASC
Trigger: GCATGACGCGACTGGGACTAGGCCGGAGGCAGCGGGGGACCGGCAGGCTGTAGGTTCCATGAGGACAGGCCTTGAGTCTGTCCTGGTCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371520.5
CDS GCA 90 bp GGGGGCCACAGCTGCCTCTGCTGTCTACTCGCCCCTCTAGCCACTTaGCCCATGGTCTGGCCACAGCCAGGCCTCTCCAGACTCTGCCTT +
Preference number: 5 (lower is better)
Translates to: GGHSCLCCLLAPLAT*PMVWPQPGLSRLCL
Trigger: AAGGCAGAGTCTGGAGAGGCCTGGCTGTGGCCAGACCATGGGGCAAGTGGCTAGAGGGGCGAGTAGACAGCAGAGGCAGCTGTGGCCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460612.5
CDS-3UTR CAA 90 bp AGGACACGCACTTGCCGGTCCTCCCGCAGCTGGGCCAGAGTTTCCAGCAGCTCATGGGCCAAGCGTCTGTaGCCTCCTTCCGCACCTCCC +
Preference number: 5 (lower is better)
Translates to: RTRTCRSSRSWARVSSSSWAKRL*PPSAPP
Trigger: GGGAGGTGCGGAAGGAGGCAACAGACGCTTGGCCCA...TGAGCTGCTGGAAACTCTGGCCCAGCTGCGGGAGGACCGGCAAGTGCGTGTCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476477.6
ENST00000544365.5
CDS TCA 90 bp CACGGCAATGGGGGCCTGCACAGAACACGCCCTTCACTCCACTTCTaGAGAGCAGGACACGCACTTGCCGGTCCTCCCGCAGCTGGGCCA +
Preference number: 5 (lower is better)
Translates to: HGNGGLHRTRPSLHF*RAGHALAGPPAAGP
Trigger: TGGCCCAGCTGCGGGAGGACCGGCAAGTGCGTGTCCTGCTCTTCAGAAGTGGAGTGAAGGGCGTGTTCTGTGCAGGCCCCCATTGCCGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543419.5
CDS GCA 90 bp GGCGAAGCCTTCGCCAATTGCTCCACCTATGGGCCAAGCGTCTGTTaGCTCCTTCCGCACCTCCCGGGGACAGGGAGACTTGAGCGGAGG +
Preference number: 5 (lower is better)
Translates to: GEAFANCSTYGPSVC*LLPHLPGTGRLERR
Trigger: CCTCCGCTCAAGTCTCCCTGTCCCCGGGAGGTGCGGAAGGAGGCAACAGACGCTTGGCCCATAGGTGGAGCAATTGGCGAAGGCTTCGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476477.6
ENST00000544365.5
CDS CCA 90 bp AGACCAGGACAGACTCAAGGCCTGTCCTCATGGAACCTACAGCCTTaGTCCGGACCCGCCAGGGCGCGCACTTGGATCTCTGAGCCCCCG +
Preference number: 5 (lower is better)
Translates to: RPGQTQGLSSWNLQP*SGPARARTWISEPP
Trigger: CGGGGGCTCAGAGATCCAAGTGCGCGCCCTGGCGGGTCCGGACCAAGGCTGTAGGTTCCATGAGGACAGGCCTTGAGTCTGTCCTGGTCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000474789.1
ENST00000544365.5
CDS-3UTR CAA 90 bp CTCCTCGTTCTGGGCCACAGCGTGATTCACCAGCCCCAGTACGTGGGCCTCAGTGTCCTCAGCTTTGTCTaGGTCCGGACCCGCCAGGGC +
Preference number: 5 (lower is better)
Translates to: LLVLGHSVIHQPQYVGLSVLSFV*VRTRQG
Trigger: GCCCTGGCGGGTCCGGACCAAGACAAAGCTGAGGAC...ACTGAGGCCCACGTACTGGGGCTGGTGAATCACGCTGTGGCCCAGAACGAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476477.6
CDS TCA 90 bp AAGCGTCTGTTGCCTCCTTCCGCACCTCCCGGGGACAGGGAGACTTaGGCGGAGGAGGTCGGGGGAAGCCCAGCTCCTCTGTGTGATTTG +
Preference number: 5 (lower is better)
Translates to: KRLLPPSAPPGDRET*AEEVGGSPAPLCDL
Trigger: CAAATCACACAGAGGAGCTGGGCTTCCCCCGACCTCCTCCGCTCAAGTCTCCCTGTCCCCGGGAGGTGCGGAAGGAGGCAACAGACGCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000476477.6
ENST00000544365.5
CDS GCA 90 bp AAAGGAAAGCAGCGAAGGACCCTGGATGGGGTGGAATTGGGCGGGTaGTGTAGTTGCGATTACCTGCCCCCGGGAGGAGCCCTCGCGTGG +
Preference number: 5 (lower is better)
Translates to: KGKQRRTLDGVELGG*CSCDYLPPGGALAW
Trigger: CCACGCGAGGGCTCCTCCCGGGGGCAGGTAATCGCAACTACAGCACCCGCCCAATTCCACCCCATCCAGGGTCCTTCGCTGCTTTCCTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498544.5
CDS-3UTR CAA 90 bp CACTCCACTTCTGAAGAGCAGGACACGCACTTGCCGGTCCTCCCGCAGCTGGGCCGGTCAATGGCTACTTaGCCCAGCCGCACGGCAATG +
Preference number: 5 (lower is better)
Translates to: HSTSEEQDTHLPVLPQLGRSMAT*PSRTAM
Trigger: CATTGCCGTGCGGCTGGGCAAAGTAGCCATTGACCG...GCCCAGCTGCGGGAGGACCGGCAAGTGCGTGTCCTGCTCTTCAGAAGTGGAGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371520.5
ENST00000476477.6
CDS-3UTR CAA 90 bp AGGACACGCACTTGCCGGTCCTCCCGCAGCTGGGCCAGAGTTTCCAGCAGCTCACGGTCAATGGCTACTTaGCCCAGCCGCACGGCAATG +
Preference number: 5 (lower is better)
Translates to: RTRTCRSSRSWARVSSSSRSMAT*PSRTAM
Trigger: CATTGCCGTGCGGCTGGGCAAAGTAGCCATTGACCG...TGAGCTGCTGGAAACTCTGGCCCAGCTGCGGGAGGACCGGCAAGTGCGTGTCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371520.5
ENST00000476477.6
CDS-3UTR CAA 90 bp AGCAGGACACGCACTTGCCGGTCCTCCCGCAGCTGGGCCAGAGTTTCCAGCAGCCGAAGCCTTCGCCAATaGCTCCACCTATGGGCCAAG +
Preference number: 5 (lower is better)
Translates to: SRTRTCRSSRSWARVSSSRSLRQ*LHLWAK
Trigger: CTTGGCCCATAGGTGGAGCAATTGGCGAAGGCTTCG...GCTGCTGGAAACTCTGGCCCAGCTGCGGGAGGACCGGCAAGTGCGTGTCCTGCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476477.6
ENST00000544365.5
CDS CCA 90 bp TGCCTCTGCTGTCTACTCGCCCCTCTAGCCACTTGCCCCATGGTCTaGCCACAGCCAGGCCTCTCCAGACTCTGCCTTTGGAAGAGCCCT +
Preference number: 5 (lower is better)
Translates to: CLCCLLAPLATCPMV*PQPGLSRLCLWKSP
Trigger: AGGGCTCTTCCAAAGGCAGAGTCTGGAGAGGCCTGGCTGTGGCCAGACCATGGGGCAAGTGGCTAGAGGGGCGAGTAGACAGCAGAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460612.5
CDS-3UTR CAA 90 bp CGTTCTGGGCCACAGCGTGATTCACCAGCCCCAGTACGTGGGCCTCAGTTCCACAACTGCACATTTACCTaGGTCCGGACCCGCCAGGGC +
Preference number: 5 (lower is better)
Translates to: RSGPQRDSPAPVRGPQFHNCTFT*VRTRQG
Trigger: GCCCTGGCGGGTCCGGACCAAGGTAAATGTGCAGTT...GTGGAACTGAGGCCCACGTACTGGGGCTGGTGAATCACGCTGTGGCCCAGAACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371520.5
CDS GCA 90 bp CACACCCAAGGCATCACCCCAAGCCCTGCCCTGAGGCCACATTACTaGCAGCACAAATCTTGCAGCATGGACTGGCAGCCACACAGACCC +
Preference number: 5 (lower is better)
Translates to: HTQGITPSPALRPHY*QHKSCSMDWQPHRP
Trigger: GGGTCTGTGTGGCTGCCAGTCCATGCTGCAAGATTTGTGCTGGCAGTAATGTGGCCTCAGGGCAGGGCTTGGGGTGATGCCTTGGGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479183.6
ENST00000539680.1
CDS CCA 90 bp TGGCCAGGCTTGAACCCGATGTCATTCATCAGGCCCCGGAGTCGCTaGACAAACACCCCCACCTCTGCTTCACTCATCTGTTCCCGCTCC +
Preference number: 5 (lower is better)
Translates to: WPGLNPMSFIRPRSR*TNTPTSASLICSRS
Trigger: GGAGCGGGAACAGATGAGTGAAGCAGAGGTGGGGGTGTTTGTCCAGCGACTCCGGGGCCTGATGAATGACATCGGGTTCAAGCCTGGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000488268.5
ENST00000495920.5
CDS-3UTR CAA 90 bp AGGAGGCCTGGGATCTGGGGAGCCTCTGCCCTAGATGACCAGAGTGACTTGCCAACATTCCCCAAGGCATaGCGGGCAGAAGGTCTGTTC +
Preference number: 5 (lower is better)
Translates to: RRPGIWGASALDDQSDLPTFPKA*RAEGLF
Trigger: GAACAGACCTTCTGCCCGCAATGCCTTGGGGAATGT...TGGCAAGTCACTCTGGTCATCTAGGGCAGAGGCTCCCCAGATCCCAGGCCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371520.5
CDS-3UTR CAA 90 bp GATCCCTTTCAGGTGATGCCTCTGCACTCCTTCACTGCTTCTCTTCTGCCCAATGAGCAGGACACGCACTaGCCGGTCCTCCCGCAGCTG +
Preference number: 5 (lower is better)
Translates to: DPFQVMPLHSFTASLLPNEQDTH*PVLPQL
Trigger: CAGCTGCGGGAGGACCGGCAAGTGCGTGTCCTGCTC...ATTGGGCAGAAGAGAAGCAGTGAAGGAGTGCAGAGGCATCACCTGAAAGGGATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476477.6
ENST00000544365.5
CDS GCA 90 bp ACCCCAAGCCCTGCCCTGAGGCCACATTACTGCCAGCACAAATCTTaGAGCATGGACTGGCAGCCACACAGACCCGGGTTCTTTCTACTC +
Preference number: 5 (lower is better)
Translates to: TPSPALRPHYCQHKS*SMDWQPHRPGFFLL
Trigger: GAGTAGAAAGAACCCGGGTCTGTGTGGCTGCCAGTCCATGCTGCAAGATTTGTGCTGGCAGTAATGTGGCCTCAGGGCAGGGCTTGGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479183.6
ENST00000539680.1
CDS-3UTR CAA 90 bp GCAAACCCAACCCTCGTGATTATTTCTAGCCAGGGTGAAGCTAAGGAAGGTAGCGAGCAGGACACGCACTaGCCGGTCCTCCCGCAGCTG +
Preference number: 5 (lower is better)
Translates to: ANPTLVIISSQGEAKEGSEQDTH*PVLPQL
Trigger: CAGCTGCGGGAGGACCGGCAAGTGCGTGTCCTGCTC...GCTACCTTCCTTAGCTTCACCCTGGCTAGAAATAATCACGAGGGTTGGGTTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358358.9
ENST00000371520.5
ENST00000371522.9
ENST00000536120.5
CDS-3UTR CAA 90 bp AAGGCAATCTGGCCACAAATCTTCCTTCTGGATCCTGCTCTTCAGGGCATGCATGAGCAGGACACGCACTaGCCGGTCCTCCCGCAGCTG +
Preference number: 5 (lower is better)
Translates to: KAIWPQIFLLDPALQGMHEQDTH*PVLPQL
Trigger: CAGCTGCGGGAGGACCGGCAAGTGCGTGTCCTGCTC...ATGCATGCCCTGAAGAGCAGGATCCAGAAGGAAGATTTGTGGCCAGATTGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358358.9
ENST00000371520.5
ENST00000371522.9
ENST00000476477.6
ENST00000536120.5
CDS TCA 90 bp ACAGATGGATTAGCCACACCCAAGGCATCACCCCAAGCCCTGCCCTaGGGCCACATTACTGCCAGCACAAATCTTGCAGCATGGACTGGC +
Preference number: 5 (lower is better)
Translates to: TDGLATPKASPQALP*GHITASTNLAAWTG
Trigger: GCCAGTCCATGCTGCAAGATTTGTGCTGGCAGTAATGTGGCCTCAGGGCAGGGCTTGGGGTGATGCCTTGGGTGTGGCTAATCCATCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479183.6
ENST00000539680.1
CDS TCA 90 bp CTGCCTCACCACGCTTCCTGTCACCCGTTAATTTCTGAACCTTTATaGCCTGGGCCCTGGCAATTGCTCCAGCCTCTAGGGCCCACTGAC +
Preference number: 5 (lower is better)
Translates to: LPHHASCHPLISEPL*PGPWQLLQPLGPTD
Trigger: GTCAGTGGGCCCTAGAGGCTGGAGCAATTGCCAGGGCCCAGGTCATAAAGGTTCAGAAATTAACGGGTGACAGGAAGCGTGGTGAGGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479183.6
ENST00000539680.1
CDS TCA 90 bp TCCCATCCGGCTGCCTCACCACGCTTCCTGTCACCCGTTAATTTCTaGACCTTTATGACCTGGGCCCTGGCAATTGCTCCAGCCTCTAGG +
Preference number: 5 (lower is better)
Translates to: SHPAASPRFLSPVNF*TFMTWALAIAPASR
Trigger: CCTAGAGGCTGGAGCAATTGCCAGGGCCCAGGTCATAAAGGTTCAGAAATTAACGGGTGACAGGAAGCGTGGTGAGGCAGCCGGATGGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479183.6
ENST00000539680.1
CDS-3UTR CAA 90 bp CCGGTCCTCCCGCAGCTGGGCCAGAGTTTCCAGCAGCTCACTGACGAAGACATTGATGACCAGAGTGACTaGCCACAAGTCACACACTCA +
Preference number: 5 (lower is better)
Translates to: PVLPQLGQSFQQLTDEDIDDQSD*PQVTHS
Trigger: TGAGTGTGTGACTTGTGGCAAGTCACTCTGGTCATC...AATGTCTTCGTCAGTGAGCTGCTGGAAACTCTGGCCCAGCTGCGGGAGGACCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371520.5
CDS-3UTR CAA 90 bp TATCTGCCTTGGCTTTGGCAGGCCCCCATTCTCCTTCCTCCTACCTTTCAGGTGGTATCTGCCTTGGCTTaGGCAGGCCCCCATTCTCCT +
Preference number: 5 (lower is better)
Translates to: YLPWLWQAPILLPPTFQVVSALA*AGPHSP
Trigger: AGGAGAATGGGGGCCTGCCAAAGCCAAGGCAGATAC...CACCTGAAAGGTAGGAGGAAGGAGAATGGGGGCCTGCCAAAGCCAAGGCAGATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000542552.1
CDS-3UTR CAA 90 bp CAGAGTTTCCAGCAGCTCACTGACGAAGACATTCCCCAAGGCATTGCGGGCAGACGAAGCCTTCGCCAATaGCTCCACCTATGGGCCAAG +
Preference number: 5 (lower is better)
Translates to: QSFQQLTDEDIPQGIAGRRSLRQ*LHLWAK
Trigger: CTTGGCCCATAGGTGGAGCAATTGGCGAAGGCTTCG...TCTGCCCGCAATGCCTTGGGGAATGTCTTCGTCAGTGAGCTGCTGGAAACTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476477.6
ENST00000544365.5
CDS-3UTR CAA 90 bp CGAAGACATTCCCCAAGGCATTGCGGGCAGAAGGTCTGTTCATCAGAATCTCAGTTGGAATGGCCAGGCTaGAACCCTGAGGGTGGGGCG +
Preference number: 5 (lower is better)
Translates to: RRHSPRHCGQKVCSSESQLEWPG*NPEGGA
Trigger: CGCCCCACCCTCAGGGTTCAAGCCTGGCCATTCCAA...CTGAGATTCTGATGAACAGACCTTCTGCCCGCAATGCCTTGGGGAATGTCTTCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000544365.5
CDS-3UTR CAA 90 bp CCTCCTACCTTTCAGGTGATGCCTCTGCACTCCTTCACTGCTTCTCTTCTGCCCGACACGTTTCTCTCCTaGCCTCAACCTCGTGGCAGC +
Preference number: 5 (lower is better)
Translates to: PPTFQVMPLHSFTASLLPDTFLS*PQPRGS
Trigger: GCTGCCACGAGGTTGAGGCAAGGAGAGAAACGTGTC...GGGCAGAAGAGAAGCAGTGAAGGAGTGCAGAGGCATCACCTGAAAGGTAGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000542552.1
CDS GCA 90 bp CCCAAGCCTCAAAGGTGGAAGAAAGATGGCTGGCCCTCTTCTGTCTaGTTCAGAGAGCCGCTAAGGATCACACGAGGTACGACGCTTGGA +
Preference number: 5 (lower is better)
Translates to: PKPQRWKKDGWPSSV*FREPLRITRGTTLG
Trigger: TCCAAGCGTCGTACCTCGTGTGATCCTTAGCGGCTCTCTGAAGCAGACAGAAGAGGGCCAGCCATCTTTCTTCCACCTTTGAGGCTTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460612.5
CDS CCA 90 bp GCCCTGAGGCCACATTACTGCCAGCACAAATCTTGCAGCATGGACTaGCAGCCACACAGACCCGGGTTCTTTCTACTCACTTCCTCTGAG +
Preference number: 5 (lower is better)
Translates to: ALRPHYCQHKSCSMD*QPHRPGFFLLTSSE
Trigger: CTCAGAGGAAGTGAGTAGAAAGAACCCGGGTCTGTGTGGCTGCCAGTCCATGCTGCAAGATTTGTGCTGGCAGTAATGTGGCCTCAGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479183.6
ENST00000539680.1
CDS CCA 90 bp TCCCAGATGCAATGTCCACCTGCAAGAAAGACGTGCTCCCTGGATTaGTCTGACCTTGTCCATCTTCACCCACACTGGAAGCCAGCCCAC +
Preference number: 5 (lower is better)
Translates to: SQMQCPPARKTCSLD*SDLVHLHPHWKPAH
Trigger: GTGGGCTGGCTTCCAGTGTGGGTGAAGATGGACAAGGTCAGACCAATCCAGGGAGCACGTCTTTCTTGCAGGTGGACATTGCATCTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479183.6
ENST00000539680.1
CDS CCA 90 bp GGCCATCCCAGATGCAATGTCCACCTGCAAGAAAGACGTGCTCCCTaGATTGGTCTGACCTTGTCCATCTTCACCCACACTGGAAGCCAG +
Preference number: 5 (lower is better)
Translates to: GHPRCNVHLQERRAP*IGLTLSIFTHTGSQ
Trigger: CTGGCTTCCAGTGTGGGTGAAGATGGACAAGGTCAGACCAATCCAGGGAGCACGTCTTTCTTGCAGGTGGACATTGCATCTGGGATGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479183.6
ENST00000539680.1
CDS-3UTR CAA 90 bp TGCTGTGTGCTGGCCTCTACTAGACACCGTGATTCCAGAGACCAGGACAGACTCAGAGATGGGGACAGGTaGACTCAGTCCCATGCCCAA +
Preference number: 5 (lower is better)
Translates to: CCVLASTRHRDSRDQDRLRDGDR*TQSHAQ
Trigger: TTGGGCATGGGACTGAGTCAACCTGTCCCCATCTCT...GAGTCTGTCCTGGTCTCTGGAATCACGGTGTCTAGTAGAGGCCAGCACACAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476477.6
CDS TCA 90 bp AGCCCAGAAGTCAGGAGCCCAGGCCCTTATTTCACCATGCCCCTTTaGTGGAGTTGTAAGTCACCAGCAAGTCTCACCCTTCCCAAGCCT +
Preference number: 5 (lower is better)
Translates to: SPEVRSPGPYFTMPL*WSCKSPASLTLPKP
Trigger: AGGCTTGGGAAGGGTGAGACTTGCTGGTGACTTACAACTCCATCAAAGGGGCATGGTGAAATAAGGGCCTGGGCTCCTGACTTCTGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460612.5
CDS TCA 90 bp GGAGACTTGAGCGGAGGAGGTCGGGGGAAGCCCAGCTCCTCTGTGTaGTTTGGTGTAACTCTGTCAACCTCCCAGCGTCAGTGTTTTAAT +
Preference number: 5 (lower is better)
Translates to: GDLSGGGRGKPSSSV*FGVTLSTSQRQCFN
Trigger: ATTAAAACACTGACGCTGGGAGGTTGACAGAGTTACACCAAATCACACAGAGGAGCTGGGCTTCCCCCGACCTCCTCCGCTCAAGTCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000476477.6
ENST00000544365.5
CDS TCA 90 bp GATGCAATGTCCACCTGCAAGAAAGACGTGCTCCCTGGATTGGTCTaGCCTTGTCCATCTTCACCCACACTGGAAGCCAGCCCACCCTAT +
Preference number: 5 (lower is better)
Translates to: DAMSTCKKDVLPGLV*PCPSSPTLEASPPY
Trigger: ATAGGGTGGGCTGGCTTCCAGTGTGGGTGAAGATGGACAAGGTCAGACCAATCCAGGGAGCACGTCTTTCTTGCAGGTGGACATTGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479183.6
ENST00000539680.1
CDS GCA 90 bp AGAGCCCTAGCCCAGAAGTCAGGAGCCCAGGCCCTTATTTCACCATaGCCCTTTGATGGAGTTGTAAGTCACCAGCAAGTCTCACCCTTC +
Preference number: 5 (lower is better)
Translates to: RALAQKSGAQALISP*PFDGVVSHQQVSPF
Trigger: GAAGGGTGAGACTTGCTGGTGACTTACAACTCCATCAAAGGGGCATGGTGAAATAAGGGCCTGGGCTCCTGACTTCTGGGCTAGGGCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460612.5
CDS CCA 90 bp CGTGAACGTGGGCATGTGAGAAGGAGAGTTGGGGCTAGACCAGCCTaGTATTTTGGTGCCTGGACACCTGGTCAGTTCCTTCTCTTTGAC +
Preference number: 5 (lower is better)
Translates to: RERGHVRRRVGARPA*YFGAWTPGQFLLFD
Trigger: GTCAAAGAGAAGGAACTGACCAGGTGTCCAGGCACCAAAATACCAGGCTGGTCTAGCCCCAACTCTCCTTCTCACATGCCCACGTTCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460612.5
CDS CCA 90 bp GCAAGTCTCACCCTTCCCAAGCCTCAAAGGTGGAAGAAAGATGGCTaGCCCTCTTCTGTCTGCTTCAGAGAGCCGCTAAGGATCACACGA +
Preference number: 5 (lower is better)
Translates to: ASLTLPKPQRWKKDG*PSSVCFREPLRITR
Trigger: TCGTGTGATCCTTAGCGGCTCTCTGAAGCAGACAGAAGAGGGCCAGCCATCTTTCTTCCACCTTTGAGGCTTGGGAAGGGTGAGACTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460612.5
CDS CCA 90 bp ACCAGCAAGTCTCACCCTTCCCAAGCCTCAAAGGTGGAAGAAAGATaGCTGGCCCTCTTCTGTCTGCTTCAGAGAGCCGCTAAGGATCAC +
Preference number: 5 (lower is better)
Translates to: TSKSHPSQASKVEER*LALFCLLQRAAKDH
Trigger: GTGATCCTTAGCGGCTCTCTGAAGCAGACAGAAGAGGGCCAGCCATCTTTCTTCCACCTTTGAGGCTTGGGAAGGGTGAGACTTGCTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460612.5
CDS CCA 90 bp CTTGAGGCATGCAAAGGTATAAGCCTCCGTGGCTGCTTTGTCTCCTaGGGAAGACAGGCCAGCCTTTGTATTCTCTGTGCCCCATCAGCA +
Preference number: 5 (lower is better)
Translates to: LEACKGISLRGCFVS*GRQASLCILCAPSA
Trigger: TGCTGATGGGGCACAGAGAATACAAAGGCTGGCCTGTCTTCCCCAGGAGACAAAGCAGCCACGGAGGCTTATACCTTTGCATGCCTCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539680.1
CDS-3UTR CAA 90 bp AACCCTTGCTCTTTCTGCCTCAGAGAGAAAGTGGAAGGACTTGTAAACTTTCAGGAGCAGGACACGCACTaGCCGGTCCTCCCGCAGCTG +
Preference number: 5 (lower is better)
Translates to: NPCSFCLREKVEGLVNFQEQDTH*PVLPQL
Trigger: CAGCTGCGGGAGGACCGGCAAGTGCGTGTCCTGCTC...CTGAAAGTTTACAAGTCCTTCCACTTTCTCTCTGAGGCAGAAAGAGCAAGGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371520.5
CDS-3UTR CAA 90 bp AAGGCAATCTGGCCACAAATCTTCCTTCTGGATCCTGCTCTTCAGGGCATGCATCGGTCAATGGCTACTTaGCCCAGCCGCACGGCAATG +
Preference number: 5 (lower is better)
Translates to: KAIWPQIFLLDPALQGMHRSMAT*PSRTAM
Trigger: CATTGCCGTGCGGCTGGGCAAAGTAGCCATTGACCG...ATGCATGCCCTGAAGAGCAGGATCCAGAAGGAAGATTTGTGGCCAGATTGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000358358.9
ENST00000371520.5
ENST00000371522.9
ENST00000476477.6
CDS GCA 90 bp GATACTACAGCAGCTAATGGCTGCACCAGGAGGGGAAGCAGCTTCTaGCTGAGCACCCTCTGTGCTCTGCCTTGCCTTAGTTTTGCTTTT +
Preference number: 5 (lower is better)
Translates to: DTTAANGCTRRGSSF*LSTLCALPCLSFAF
Trigger: AAAAGCAAAACTAAGGCAAGGCAGAGCACAGAGGGTGCTCAGGCAGAAGCTGCTTCCCCTCCTGGTGCAGCCATTAGCTGCTGTAGTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460612.5
CDS GCA 90 bp AGGGGCGGGTGCATTTTAATACAGCCACATAGAAGCAACAGTGTCTaGTTTGTCACTGGCCTTGGTTCCACACCAGCCCTAGCACTCCAG +
Preference number: 5 (lower is better)
Translates to: RGGCILIQPHRSNSV*FVTGLGSTPALALQ
Trigger: CTGGAGTGCTAGGGCTGGTGTGGAACCAAGGCCAGTGACAAAGCAGACACTGTTGCTTCTATGTGGCTGTATTAAAATGCACCCGCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539680.1
CDS GCA 90 bp GCTACATACCTGGGCATAGCACATCCCTTCAATGGCCATCCCAGATaGAATGTCCACCTGCAAGAAAGACGTGCTCCCTGGATTGGTCTG +
Preference number: 5 (lower is better)
Translates to: ATYLGIAHPFNGHPR*NVHLQERRAPWIGL
Trigger: CAGACCAATCCAGGGAGCACGTCTTTCTTGCAGGTGGACATTGCATCTGGGATGGCCATTGAAGGGATGTGCTATGCCCAGGTATGTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539680.1
CDS CCA 90 bp AGTTGTAAGTCACCAGCAAGTCTCACCCTTCCCAAGCCTCAAAGGTaGAAGAAAGATGGCTGGCCCTCTTCTGTCTGCTTCAGAGAGCCG +
Preference number: 5 (lower is better)
Translates to: SCKSPASLTLPKPQR*KKDGWPSSVCFREP
Trigger: CGGCTCTCTGAAGCAGACAGAAGAGGGCCAGCCATCTTTCTTCCACCTTTGAGGCTTGGGAAGGGTGAGACTTGCTGGTGACTTACAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460612.5
CDS-3UTR CAA 90 bp AAAGCAAACCCAACCCTCGTGATTATTTCTAGCCAGGGTGAAGCTAAGGAAGGTAATCTCAGTGATCCCTaGGTCCGGACCCGCCAGGGC +
Preference number: 5 (lower is better)
Translates to: KANPTLVIISSQGEAKEGNLSDP*VRTRQG
Trigger: GCCCTGGCGGGTCCGGACCAAGGGATCACTGAGATT...ACCTTCCTTAGCTTCACCCTGGCTAGAAATAATCACGAGGGTTGGGTTTGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358358.9
ENST00000371522.9
ENST00000536120.5
CDS-3UTR CAA 90 bp TCCAAAGCAAACCCAACCCTCGTGATTATTTCTAGCCAGGGTGAAGCTAAGGAAAATCTCAGTGATCCCTaGGTCCGGACCCGCCAGGGC +
Preference number: 5 (lower is better)
Translates to: SKANPTLVIISSQGEAKENLSDP*VRTRQG
Trigger: GCCCTGGCGGGTCCGGACCAAGGGATCACTGAGATT...TTCCTTAGCTTCACCCTGGCTAGAAATAATCACGAGGGTTGGGTTTGCTTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358358.9
ENST00000371522.9
ENST00000536120.5
CDS-3UTR CAA 90 bp CCAGAGCATTTAAACAATTTGTCCACGGTTATACAGCAAGTAACTGGCAGAGACGAGCAGGACACGCACTaGCCGGTCCTCCCGCAGCTG +
Preference number: 5 (lower is better)
Translates to: PEHLNNLSTVIQQVTGRDEQDTH*PVLPQL
Trigger: CAGCTGCGGGAGGACCGGCAAGTGCGTGTCCTGCTC...GTCTCTGCCAGTTACTTGCTGTATAACCGTGGACAAATTGTTTAAATGCTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371522.9
ENST00000536120.5
CDS-3UTR CAA 90 bp AAGCTGAGGCCCAGAGCATTTAAACAATTTGTCCACGGTTATACAGCAAGTAACGAGCAGGACACGCACTaGCCGGTCCTCCCGCAGCTG +
Preference number: 5 (lower is better)
Translates to: KLRPRAFKQFVHGYTASNEQDTH*PVLPQL
Trigger: CAGCTGCGGGAGGACCGGCAAGTGCGTGTCCTGCTC...GTTACTTGCTGTATAACCGTGGACAAATTGTTTAAATGCTCTGGGCCTCAGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371522.9
ENST00000536120.5
CDS-3UTR CAA 90 bp TATCTGCCTTGGCTTTGGCAGGCCCCCATTCTCCTTCCTCCTACCTTTCAGGTGGATGGAAAGGTCAGCTaGTGGTGGAGAACCTTAGTG +
Preference number: 5 (lower is better)
Translates to: YLPWLWQAPILLPPTFQVDGKVS*WWRTLV
Trigger: CACTAAGGTTCTCCACCACAAGCTGACCTTTCCATC...CACCTGAAAGGTAGGAGGAAGGAGAATGGGGGCCTGCCAAAGCCAAGGCAGATA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542552.1
CDS TCA 90 bp AAGTCCCAGAGAGAAGCACTATGGCTCTCCTCAAGCCACTCCAGGTaGCTTATGAGGGACGATGGATGCGGTCAGACTGTTTGTGTTGAG +
Preference number: 5 (lower is better)
Translates to: KSQREALWLSSSHSR*LMRDDGCGQTVCVE
Trigger: CTCAACACAAACAGTCTGACCGCATCCATCGTCCCTCATAAGTCACCTGGAGTGGCTTGAGGAGAGCCATAGTGCTTCTCTCTGGGACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539680.1
CDS GCA 90 bp CTGGACTCTGATCTTGAGGCATGCAAAGGTATAAGCCTCCGTGGCTaGTTTGTCTCCTGGGGAAGACAGGCCAGCCTTTGTATTCTCTGT +
Preference number: 5 (lower is better)
Translates to: LDSDLEACKGISLRG*FVSWGRQASLCILC
Trigger: ACAGAGAATACAAAGGCTGGCCTGTCTTCCCCAGGAGACAAAGCAGCCACGGAGGCTTATACCTTTGCATGCCTCAAGATCAGAGTCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539680.1
CDS CCA 90 bp CTGAGCACCCTCTGTGCTCTGCCTTGCCTTAGTTTTGCTTTTGGTTaGAAGCCAAGAACAGTGGCTGACTGCAGAATGTCCAGACTCACC +
Preference number: 5 (lower is better)
Translates to: LSTLCALPCLSFAFG*KPRTVADCRMSRLT
Trigger: GGTGAGTCTGGACATTCTGCAGTCAGCCACTGTTCTTGGCTTCCAACCAAAAGCAAAACTAAGGCAAGGCAGAGCACAGAGGGTGCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460612.5
CDS CCA 90 bp GTGAGAAGGAGAGTTGGGGCTAGACCAGCCTGGTATTTTGGTGCCTaGACACCTGGTCAGTTCCTTCTCTTTGACCTGCATTGTGTAGAC +
Preference number: 5 (lower is better)
Translates to: VRRRVGARPAWYFGA*TPGQFLLFDLHCVD
Trigger: GTCTACACAATGCAGGTCAAAGAGAAGGAACTGACCAGGTGTCCAGGCACCAAAATACCAGGCTGGTCTAGCCCCAACTCTCCTTCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460612.5
CDS CCA 90 bp CCCACATGCTCCCCACAACTCTGTCTTTCCCTCAGAGATTATCTGTaGAGGAGCCTGGGGTATTTGACCTACAGGGTTTCTCAAAGCCTG +
Preference number: 5 (lower is better)
Translates to: PTCSPQLCLSLRDYL*RSLGYLTYRVSQSL
Trigger: CAGGCTTTGAGAAACCCTGTAGGTCAAATACCCCAGGCTCCTCCACAGATAATCTCTGAGGGAAAGACAGAGTTGTGGGGAGCATGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493896.2
CDS-3UTR CAA 90 bp AACAATTTGTCCACGGTTATACAGCAAGTAACTGGCAGAGACTGGGATCTGCAGCGGTCAATGGCTACTTaGCCCAGCCGCACGGCAATG +
Preference number: 5 (lower is better)
Translates to: NNLSTVIQQVTGRDWDLQRSMAT*PSRTAM
Trigger: CATTGCCGTGCGGCTGGGCAAAGTAGCCATTGACCG...CTGCAGATCCCAGTCTCTGCCAGTTACTTGCTGTATAACCGTGGACAAATTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371522.9
CDS-3UTR CAA 90 bp ACCTGCACAGAACACGCCCTTCACTCCACTTCTGAAGAGCAGGACACGCACTTGTGGAGAGAAAAACCCTaGCTCTTTCTGCCTCAGAGA +
Preference number: 5 (lower is better)
Translates to: TCTEHALHSTSEEQDTHLWREKP*LFLPQR
Trigger: TCTCTGAGGCAGAAAGAGCAAGGGTTTTTCTCTCCA...CAAGTGCGTGTCCTGCTCTTCAGAAGTGGAGTGAAGGGCGTGTTCTGTGCAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371520.5
CDS-3UTR CAA 90 bp TACATTTATATATTTGCTGTGTGCTGGCCTCTACTAGACACCGTGATTCCAGAGATGGAACCTACAGCCTaGGTCCGGACCCGCCAGGGC +
Preference number: 5 (lower is better)
Translates to: YIYIFAVCWPLLDTVIPEMEPTA*VRTRQG
Trigger: GCCCTGGCGGGTCCGGACCAAGGCTGTAGGTTCCAT...CTCTGGAATCACGGTGTCTAGTAGAGGCCAGCACACAGCAAATATATAAATGTA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000544365.5
CDS TCA 90 bp GCTACCCACACTTCTAGGCTGGTGTCATCACTGATGACCCAGCTGTaGTTTTACAGCTGTGAGATTGCAGTGCAGGGAGGTGAAGCACTT +
Preference number: 5 (lower is better)
Translates to: ATHTSRLVSSLMTQL*FYSCEIAVQGGEAL
Trigger: AAGTGCTTCACCTCCCTGCACTGCAATCTCACAGCTGTAAAATCACAGCTGGGTCATCAGTGATGACACCAGCCTAGAAGTGTGGGTAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539680.1
CDS TCA 90 bp AGAGAGAAGCACTATGGCTCTCCTCAAGCCACTCCAGGTGACTTATaGGGGACGATGGATGCGGTCAGACTGTTTGTGTTGAGAAGAACC +
Preference number: 5 (lower is better)
Translates to: REKHYGSPQATPGDL*GTMDAVRLFVLRRT
Trigger: GGTTCTTCTCAACACAAACAGTCTGACCGCATCCATCGTCCCTCATAAGTCACCTGGAGTGGCTTGAGGAGAGCCATAGTGCTTCTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539680.1
CDS TCA 90 bp CAGCCTGCAGGCTACAACCAAGCCCTTGACCTCCCAACTCCATCCTaGACTTTACAGTGGCATCTGATACAGAGGCAAAAGATGTGGTTC +
Preference number: 5 (lower is better)
Translates to: QPAGYNQALDLPTPS*TLQWHLIQRQKMWF
Trigger: GAACCACATCTTTTGCCTCTGTATCAGATGCCACTGTAAAGTTCAGGATGGAGTTGGGAGGTCAAGGGCTTGGTTGTAGCCTGCAGGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539680.1
CDS TCA 90 bp ACAGCCCCTACATTGAACACAGCCTGCAGGCTACAACCAAGCCCTTaGCCTCCCAACTCCATCCTGAACTTTACAGTGGCATCTGATACA +
Preference number: 5 (lower is better)
Translates to: TAPTLNTACRLQPSP*PPNSILNFTVASDT
Trigger: TGTATCAGATGCCACTGTAAAGTTCAGGATGGAGTTGGGAGGTCAAGGGCTTGGTTGTAGCCTGCAGGCTGTGTTCAATGTAGGGGCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539680.1
CDS-3UTR CAA 90 bp AAGCTGAGGCCCAGAGCATTTAAACAATTTGTCCACGGTTATACAGCAAGTAACAATCTCAGTGATCCCTaGGTCCGGACCCGCCAGGGC +
Preference number: 5 (lower is better)
Translates to: KLRPRAFKQFVHGYTASNNLSDP*VRTRQG
Trigger: GCCCTGGCGGGTCCGGACCAAGGGATCACTGAGATT...GTTACTTGCTGTATAACCGTGGACAAATTGTTTAAATGCTCTGGGCCTCAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000371522.9
ENST00000536120.5
CDS-3UTR CAA 90 bp AGAAGGTCTGTTCATCAGAATCTCAGTGATCCCTTTCAGGTGATGCCTCTGCACAGAGATGGGGACAGGTaGACTCAGTCCCATGCCCAA +
Preference number: 5 (lower is better)
Translates to: RRSVHQNLSDPFQVMPLHRDGDR*TQSHAQ
Trigger: TTGGGCATGGGACTGAGTCAACCTGTCCCCATCTCT...GTGCAGAGGCATCACCTGAAAGGGATCACTGAGATTCTGATGAACAGACCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476477.6
ENST00000544365.5
CDS-3UTR CAA 90 bp TGCTGGCCTCTACTAGACACCGTGATTCCAGAGACCAGGACAGACTCAAGGCCTTGGCAGCAAAAACCTTaGCTGACATTAACACACTCC +
Preference number: 5 (lower is better)
Translates to: CWPLLDTVIPETRTDSRPWQQKP*LTLTHS
Trigger: GGAGTGTGTTAATGTCAGCAAAGGTTTTTGCTGCCA...AGGCCTTGAGTCTGTCCTGGTCTCTGGAATCACGGTGTCTAGTAGAGGCCAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000542552.1
CDS GCA 90 bp CACCTTTCCCACTTCCTCGACCTCATTTCAGCAAATGCCAGCCTCTaGGGTAAGGTTTTACCCCAGCAGAGTGAAACAAAGTCAGGGTTA +
Preference number: 5 (lower is better)
Translates to: HLSHFLDLISANASL*GKVLPQQSETKSGL
Trigger: TAACCCTGACTTTGTTTCACTCTGCTGGGGTAAAACCTTACCGCAGAGGCTGGCATTTGCTGAAATGAGGTCGAGGAAGTGGGAAAGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539680.1
CDS-3UTR CAA 90 bp AAAGCAAACCCAACCCTCGTGATTATTTCTAGCCAGGGTGAAGCTAAGGAAGGTACATTCCCCAAGGCATaGCGGGCAGAAGGTCTGTTC +
Preference number: 5 (lower is better)
Translates to: KANPTLVIISSQGEAKEGTFPKA*RAEGLF
Trigger: GAACAGACCTTCTGCCCGCAATGCCTTGGGGAATGT...ACCTTCCTTAGCTTCACCCTGGCTAGAAATAATCACGAGGGTTGGGTTTGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358358.9
ENST00000371520.5
ENST00000371522.9
ENST00000536120.5
CDS-3UTR CAA 90 bp ACAGAACACGCCCTTCACTCCACTTCTGAAGAGCAGGACACGCACTTGCCGGTCAACTTGAAAGCATGCTaGGGGAAACTTAACTGCTTT +
Preference number: 5 (lower is better)
Translates to: TEHALHSTSEEQDTHLPVNLKAC*GKLNCF
Trigger: AAAGCAGTTAAGTTTCCCCAAGCATGCTTTCAAGTT...GACCGGCAAGTGCGTGTCCTGCTCTTCAGAAGTGGAGTGAAGGGCGTGTTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544365.5
CDS TCA 90 bp AGCCTGGTATTTTGGTGCCTGGACACCTGGTCAGTTCCTTCTCTTTaGCCTGCATTGTGTAGACAGAAGCTACTTTCATGCCTGGAGCTA +
Preference number: 5 (lower is better)
Translates to: SLVFWCLDTWSVPSL*PALCRQKLLSCLEL
Trigger: TAGCTCCAGGCATGAAAGTAGCTTCTGTCTACACAATGCAGGTCAAAGAGAAGGAACTGACCAGGTGTCCAGGCACCAAAATACCAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460612.5
CDS TCA 90 bp AGTAAGAGATTTAATAGGTCAGTCCCAAGTGTACAGCCCCTACATTaGACACAGCCTGCAGGCTACAACCAAGCCCTTGACCTCCCAACT +
Preference number: 5 (lower is better)
Translates to: SKRFNRSVPSVQPLH*TQPAGYNQALDLPT
Trigger: AGTTGGGAGGTCAAGGGCTTGGTTGTAGCCTGCAGGCTGTGTTCAATGTAGGGGCTGTACACTTGGGACTGACCTATTAAATCTCTTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539680.1
CDS GCA 90 bp GGGAAGACAAATGTGTATCAGGCATTATTGACCCAGGATCATCAGTaGTCCAATAAAAAGCTCAGAGGGTGGGTTGGGAAGGCTTCCTGG +
Preference number: 5 (lower is better)
Translates to: GKTNVYQALLTQDHQ*SNKKLRGWVGKASW
Trigger: CCAGGAAGCCTTCCCAACCCACCCTCTGAGCTTTTTATTGGAGCACTGATGATCCTGGGTCAATAATGCCTGATACACATTTGTCTTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488268.5
CDS-3UTR CAA 90 bp TATTTTAAGTGCGTAAGTTCCTTAAGGCCAATCAGATTCTCTTCATTCACTCATACCTTAGTGCCCAGCTaGGTCCGGACCCGCCAGGGC +
Preference number: 5 (lower is better)
Translates to: YFKCVSSLRPIRFSSFTHTLVPS*VRTRQG
Trigger: GCCCTGGCGGGTCCGGACCAAGCTGGGCACTAAGGT...ATGAGTGAATGAAGAGAATCTGATTGGCCTTAAGGAACTTACGCACTTAAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000542552.1
CDS TCA 90 bp ACCATTCGTAACTATGACAAAACTGCTGGGAGAAACGAGACAGACTaGGACATTTTGCCAGAGAAGAGGAGTTCTCCTTCCCATCCGGCT +
Preference number: 5 (lower is better)
Translates to: TIRNYDKTAGRNETD*DILPEKRSSPSHPA
Trigger: AGCCGGATGGGAAGGAGAACTCCTCTTCTCTGGCAAAATGTCTCAGTCTGTCTCGTTTCTCCCAGCAGTTTTGTCATAGTTACGAATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000479183.6
ENST00000539680.1
CDS TCA 90 bp CCCACACTGGAAGCCAGCCCACCCTATTGCCTACAGACATCTATATaGGCAGAGATAGCTATGAGAAGGAATTTCCCTCCTAGAGAAGAA +
Preference number: 5 (lower is better)
Translates to: PTLEASPPYCLQTSI*AEIAMRRNFPPREE
Trigger: TTCTTCTCTAGGAGGGAAATTCCTTCTCATAGCTATCTCTGCTCATATAGATGTCTGTAGGCAATAGGGTGGGCTGGCTTCCAGTGTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479183.6
ENST00000539680.1
CDS TCA 90 bp TCTGTCTTTCCCTCAGAGATTATCTGTGGAGGAGCCTGGGGTATTTaGCCTACAGGGTTTCTCAAAGCCTGGGTTTTGCTAACTGCACAA +
Preference number: 5 (lower is better)
Translates to: SVFPSEIICGGAWGI*PTGFLKAWVLLTAQ
Trigger: TTGTGCAGTTAGCAAAACCCAGGCTTTGAGAAACCCTGTAGGTCAAATACCCCAGGCTCCTCCACAGATAATCTCTGAGGGAAAGACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493896.2
CDS GCA 90 bp TTCCCTCACTCTCATCTGGACGAGCTGCTTGCTTATCCTCCTCTGTaGCTTTGCCCATACTTTTCCTCTGGAATTTTTATCCTTCCCACA +
Preference number: 5 (lower is better)
Translates to: FPHSHLDELLAYPPL*LCPYFSSGIFILPT
Trigger: TGTGGGAAGGATAAAAATTCCAGAGGAAAAGTATGGGCAAAGGCACAGAGGAGGATAAGCAAGCAGCTCGTCCAGATGAGAGTGAGGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000479183.6
ENST00000539680.1
CDS-3UTR CAA 90 bp TATTTTAAGTGCGTAAGTTCCTTAAGGCCAATCAGATTCTCTTCATTCACTCATTGGGCCAAGCGTCTGTaGCCTCCTTCCGCACCTCCC +
Preference number: 5 (lower is better)
Translates to: YFKCVSSLRPIRFSSFTHWAKRL*PPSAPP
Trigger: GGGAGGTGCGGAAGGAGGCAACAGACGCTTGGCCCA...ATGAGTGAATGAAGAGAATCTGATTGGCCTTAAGGAACTTACGCACTTAAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476477.6
ENST00000544365.5
CDS TCA 90 bp AAAAGAAGTACGAACGTGAAGGATGTCCAGCAGCTGCTACACGCTTaGAAGGCAAATCAAAACAGTGAGGTACTGTGCCCTTTCACCTCA +
Preference number: 5 (lower is better)
Translates to: KRSTNVKDVQQLLHA*KANQNSEVLCPFTS
Trigger: TGAGGTGAAAGGGCACAGTACCTCACTGTTTTGATTTGCCTTTCAAGCGTGTAGCAGCTGCTGGACATCCTTCACGTTCGTACTTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539680.1
CDS TCA 90 bp CAGAGGCAAAAGATGTGGTTCTTCCTCTTAAGGACCTGTGTTCTGTaGTTCTCGGCATTAAGTGGGCAGGATGAACCCCAGTACATTAGA +
Preference number: 5 (lower is better)
Translates to: QRQKMWFFLLRTCVL*FSALSGQDEPQYIR
Trigger: TCTAATGTACTGGGGTTCATCCTGCCCACTTAATGCCGAGAATCACAGAACACAGGTCCTTAAGAGGAAGAACCACATCTTTTGCCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539680.1
CDS CCA 90 bp CTTCTCTTTGACCTGCATTGTGTAGACAGAAGCTACTTTCATGCCTaGAGCTACACATTTTTATATGTTGCTCCTGGGGTGGCAGGAGAG +
Preference number: 5 (lower is better)
Translates to: LLFDLHCVDRSYFHA*SYTFLYVAPGVAGE
Trigger: CTCTCCTGCCACCCCAGGAGCAACATATAAAAATGTGTAGCTCCAGGCATGAAAGTAGCTTCTGTCTACACAATGCAGGTCAAAGAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000460612.5
CDS TCA 90 bp GATAAATCTGACTTGGACAGAATGGGAAGACTGGACATTGCTCTTTaGCCTCCTTGGCTCGTAACAGCAATTGCTCTGAGGTTGGTCAAA +
Preference number: 5 (lower is better)
Translates to: DKSDLDRMGRLDIAL*PPWLVTAIALRLVK
Trigger: TTTGACCAACCTCAGAGCAATTGCTGTTACGAGCCAAGGAGGTCAAAGAGCAATGTCCAGTCTTCCCATTCTGTCCAAGTCAGATTTATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460612.5
CDS GCA 90 bp ATCACACGAGGTACGACGCTTGGAACAAGGAGAGTTCCTAGGAGGTaGCCCATATCTATTTGTGGATTACTATTAATAGGTTCTCTGGCT +
Preference number: 5 (lower is better)
Translates to: ITRGTTLGTRRVPRR*PISICGLLLIGSLA
Trigger: AGCCAGAGAACCTATTAATAGTAATCCACAAATAGATATGGGGCACCTCCTAGGAACTCTCCTTGTTCCAAGCGTCGTACCTCGTGTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460612.5
CDS GCA 90 bp AACAGCAATTGTCAAAACTTGAAAGCATGCTTGGGGAAACTTAACTaGTTTGGAATGGCCAGGCTTGAACCCGATGTCATTCATCAGGCC +
Preference number: 5 (lower is better)
Translates to: NSNCQNLKACLGKLN*FGMARLEPDVIHQA
Trigger: GGCCTGATGAATGACATCGGGTTCAAGCCTGGCCATTCCAAAGCAGTTAAGTTTCCCCAAGCATGCTTTCAAGTTTTGACAATTGCTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488268.5
CDS TCA 90 bp CAGGTGACTTATGAGGGACGATGGATGCGGTCAGACTGTTTGTGTTaGGAAGAACCTTCTAAAATTGGTCATGTACCATACAAAGTCCCT +
Preference number: 5 (lower is better)
Translates to: QVTYEGRWMRSDCLC*EEPSKIGHVPYKVP
Trigger: AGGGACTTTGTATGGTACATGACCAATTTTAGAAGGTTCTTCTCAACACAAACAGTCTGACCGCATCCATCGTCCCTCATAAGTCACCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539680.1
CDS TCA 90 bp TCCAAGAAGGCTGCTCCTAATCACCAGGTCAGTCACCTGAGAAAATaGTCAGTTATCTTCTTTATCCCCTCCCATTCTTCAAACAAAGCT +
Preference number: 5 (lower is better)
Translates to: SKKAAPNHQVSHLRK*SVIFFIPSHSSNKA
Trigger: AGCTTTGTTTGAAGAATGGGAGGGGATAAAGAAGATAACTGATCATTTTCTCAGGTGACTGACCTGGTGATTAGGAGCAGCCTTCTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460612.5
CDS TCA 90 bp ATAGTCTACAGGTCTAGATATGAAAGCTGCAATCAGCCACTCCATTaGGTGACCCAGAGTTCTGTATTAGTTCGGAGACTTTCTAACCAA +
Preference number: 5 (lower is better)
Translates to: IVYRSRYESCNQPLH*VTQSSVLVRRLSNQ
Trigger: TTGGTTAGAAAGTCTCCGAACTAATACAGAACTCTGGGTCACTCAATGGAGTGGCTGATTGCAGCTTTCATATCTAGACCTGTAGACTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539680.1
CDS TCA 90 bp AATGTAAACAATAATACTGTCTGGCCAATTTGCAGATGTGTAAACTaGCGTAGAGCACGAGGTCAGAGTTCAAGTCTGTTAGAAGAGTCC +
Preference number: 5 (lower is better)
Translates to: NVNNNTVWPICRCVN*RRARGQSSSLLEES
Trigger: GGACTCTTCTAACAGACTTGAACTCTGACCTCGTGCTCTACGTCAGTTTACACATCTGCAAATTGGCCAGACAGTATTATTGTTTACATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479183.6
ENST00000539680.1
CDS GCA 90 bp CAGTTATCTTCTTTATCCCCTCCCATTCTTCAAACAAAGCTCAATTaGTCAGAACAAGTAATGCAAATTTGGCTGGTGCCAGTATTCCTG +
Preference number: 5 (lower is better)
Translates to: QLSSLSPPILQTKLN*SEQVMQIWLVPVFL
Trigger: CAGGAATACTGGCACCAGCCAAATTTGCATTACTTGTTCTGAGCAATTGAGCTTTGTTTGAAGAATGGGAGGGGATAAAGAAGATAACTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460612.5
CDS GCA 90 bp ACTGTGCCCTTTCACCTCAGACCAGCAAATACTAAAATATCAATATaGCTACTACTGCCGAGACTGGGGAAACCAGTATTTACATACATT +
Preference number: 5 (lower is better)
Translates to: TVPFHLRPANTKISI*LLLPRLGKPVFTYI
Trigger: AATGTATGTAAATACTGGTTTCCCCAGTCTCGGCAGTAGTAGGCATATTGATATTTTAGTATTTGCTGGTCTGAGGTGAAAGGGCACAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539680.1
CDS CCA 90 bp AATAAATTAGCAACTAAATACAGAGGCTTAGTGTTCTGTCCTGTTTaGCAAGACAGTAATCCTGGCCCTACTTGTGTAATATTCTTTCAC +
Preference number: 5 (lower is better)
Translates to: NKLATKYRGLVFCPV*QDSNPGPTCVIFFH
Trigger: GTGAAAGAATATTACACAAGTAGGGCCAGGATTACTGTCTTGCCAAACAGGACAGAACACTAAGCCTCTGTATTTAGTTGCTAATTTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493896.2
CDS GCA 90 bp TTCACCTCAGACCAGCAAATACTAAAATATCAATATGCCTACTACTaGCGAGACTGGGGAAACCAGTATTTACATACATTATTGATAGAA +
Preference number: 5 (lower is better)
Translates to: FTSDQQILKYQYAYY*RDWGNQYLHTLLIE
Trigger: TTCTATCAATAATGTATGTAAATACTGGTTTCCCCAGTCTCGGCAGTAGTAGGCATATTGATATTTTAGTATTTGCTGGTCTGAGGTGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539680.1
CDS TCA 72 bp TTGGTCCGGACCCGCCAGGGCGCGCACTTGGATCTCTaGGCCCCCGGCCGCCCCGTCGGAAGCGCAGCCGCG +
Preference number: 6 (lower is better)
Translates to: LVRTRQGAHLDL*APGRPVGSAAA
Trigger: CGCGGCTGCGCTTCCGACGGGGCGGCCGGGGGCTCAGAGATCCAAGTGCGCGCCCTGGCGGGTCCGGACCAA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000358358.9
ENST00000371520.5
ENST00000371522.9
ENST00000460612.5
ENST00000467988.2
ENST00000474789.1
ENST00000476477.6
ENST00000495920.5
ENST00000536120.5
ENST00000542552.1
ENST00000544365.5
CDS CCA 72 bp TGCCCAGCTTGGTCCGGACCCGCCAGGGCGCGCACTTaGATCTCTGAGCCCCCGGCCGCCCCGTCGGAAGCG +
Preference number: 6 (lower is better)
Translates to: CPAWSGPARART*ISEPPAAPSEA
Trigger: CGCTTCCGACGGGGCGGCCGGGGGCTCAGAGATCCAAGTGCGCGCCCTGGCGGGTCCGGACCAAGCTGGGCA
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000542552.1
CDS CCA 72 bp GTGATCCCTTGGTCCGGACCCGCCAGGGCGCGCACTTaGATCTCTGAGCCCCCGGCCGCCCCGTCGGAAGCG +
Preference number: 6 (lower is better)
Translates to: VIPWSGPARART*ISEPPAAPSEA
Trigger: CGCTTCCGACGGGGCGGCCGGGGGCTCAGAGATCCAAGTGCGCGCCCTGGCGGGTCCGGACCAAGGGATCAC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000358358.9
ENST00000371522.9
ENST00000460612.5
ENST00000467988.2
ENST00000495920.5
ENST00000536120.5
CDS CCA 72 bp CTACAGCCTTGGTCCGGACCCGCCAGGGCGCGCACTTaGATCTCTGAGCCCCCGGCCGCCCCGTCGGAAGCG +
Preference number: 6 (lower is better)
Translates to: LQPWSGPARART*ISEPPAAPSEA
Trigger: CGCTTCCGACGGGGCGGCCGGGGGCTCAGAGATCCAAGTGCGCGCCCTGGCGGGTCCGGACCAAGGCTGTAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000474789.1
ENST00000544365.5
CDS CCA 72 bp GCTTTGTCTTGGTCCGGACCCGCCAGGGCGCGCACTTaGATCTCTGAGCCCCCGGCCGCCCCGTCGGAAGCG +
Preference number: 6 (lower is better)
Translates to: ALSWSGPARART*ISEPPAAPSEA
Trigger: CGCTTCCGACGGGGCGGCCGGGGGCTCAGAGATCCAAGTGCGCGCCCTGGCGGGTCCGGACCAAGACAAAGC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000476477.6
CDS TCA 72 bp GGTGCTTCTCCGGCCCTGCACCGTCTCGGCTCCCGCTaGGAGCTCGCAGTTCCGGCGTCGGGCGAAGCCTTC +
Preference number: 6 (lower is better)
Translates to: GASPALHRLGSR*ELAVPASGEAF
Trigger: GAAGGCTTCGCCCGACGCCGGAACTGCGAGCTCTCAGCGGGAGCCGAGACGGTGCAGGGCCGGAGAAGCACC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000476477.6
ENST00000536120.5
ENST00000542552.1
ENST00000544365.5
CDS CCA 72 bp CATTTACCTTGGTCCGGACCCGCCAGGGCGCGCACTTaGATCTCTGAGCCCCCGGCCGCCCCGTCGGAAGCG +
Preference number: 6 (lower is better)
Translates to: HLPWSGPARART*ISEPPAAPSEA
Trigger: CGCTTCCGACGGGGCGGCCGGGGGCTCAGAGATCCAAGTGCGCGCCCTGGCGGGTCCGGACCAAGGTAAATG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371520.5
CDS GCA 72 bp TGTCCTCATGGAACCTACAGCCTGCCGGTCCCCCGCTaGCTCCGGCCTAGTCCCAGTCGCGTCATGCGCCGC +
Preference number: 6 (lower is better)
Translates to: CPHGTYSLPVPR*LRPSPSRVMRR
Trigger: GCGGCGCATGACGCGACTGGGACTAGGCCGGAGGCAGCGGGGGACCGGCAGGCTGTAGGTTCCATGAGGACA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371520.5
CDS GCA 72 bp GGGGATCGAATCCTTCAACGCACTGAGCGGCCCACCTaGCGGTCCCCCGCTGCCTCCGGCCTAGTCCCAGTC +
Preference number: 6 (lower is better)
Translates to: GDRILQRTERPT*RSPAASGLVPV
Trigger: GACTGGGACTAGGCCGGAGGCAGCGGGGGACCGGCAGGTGGGCCGCTCAGTGCGTTGAAGGATTCGATCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000544531.5
CDS TCA 72 bp TTGCCTCCTTCCGCACCTCCCGGGGACAGGGAGACTTaGGCGGAGGAGGTCGGGGGAAGCCCAGCTCCTCTG +
Preference number: 6 (lower is better)
Translates to: LPPSAPPGDRET*AEEVGGSPAPL
Trigger: CAGAGGAGCTGGGCTTCCCCCGACCTCCTCCGCTCAAGTCTCCCTGTCCCCGGGAGGTGCGGAAGGAGGCAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000476477.6
ENST00000544365.5
CDS GCA 72 bp TCCCCCGCTGCCTCCGGCCTAGTCCCAGTCGCGTCATaGGCCGCCCCGGAACTGCACATTTACCTTGGTCCG +
Preference number: 6 (lower is better)
Translates to: SPAASGLVPVAS*AAPELHIYLGP
Trigger: CGGACCAAGGTAAATGTGCAGTTCCGGGGCGGCGCATGACGCGACTGGGACTAGGCCGGAGGCAGCGGGGGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000371520.5
ENST00000544531.5
CDS CCA 72 bp CGCGTCATGCGCCGCCCCGGAACTGCACATTTACCTTaGTCCGGACCCGCCAGGGCGCGCACTTGGATCTCT +
Preference number: 6 (lower is better)
Translates to: RVMRRPGTAHLP*SGPARARTWIS
Trigger: AGAGATCCAAGTGCGCGCCCTGGCGGGTCCGGACCAAGGTAAATGTGCAGTTCCGGGGCGGCGCATGACGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371520.5
CDS CAA 72 bp TCGCGTCATGCGCCGCCCCGGAACTGCACATTTACCTaGGTCCGGACCCGCCAGGGCGCGCACTTGGATCTC +
Preference number: 6 (lower is better)
Translates to: SRHAPPRNCTFT*VRTRQGAHLDL
Trigger: GAGATCCAAGTGCGCGCCCTGGCGGGTCCGGACCAAGGTAAATGTGCAGTTCCGGGGCGGCGCATGACGCGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371520.5
CDS GCA 72 bp ACAGACTCAAGGCCTGTCCTCATGGAACCTACAGCCTaGCGGTCCCCCGCTGCCTCCGGCCTAGTCCCAGTC +
Preference number: 6 (lower is better)
Translates to: TDSRPVLMEPTA*RSPAASGLVPV
Trigger: GACTGGGACTAGGCCGGAGGCAGCGGGGGACCGGCAGGCTGTAGGTTCCATGAGGACAGGCCTTGAGTCTGT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371520.5
CDS GCA 72 bp CAGCGAAGGACCCTGGATGGGGTGGAATTGGGCGGGTaGTGTAGTTGCGATTACCTGCCCCCGGGAGGAGCC +
Preference number: 6 (lower is better)
Translates to: QRRTLDGVELGG*CSCDYLPPGGA
Trigger: GGCTCCTCCCGGGGGCAGGTAATCGCAACTACAGCACCCGCCCAATTCCACCCCATCCAGGGTCCTTCGCTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498544.5
CDS CCA 72 bp GGCGTCGGGCGAAGCCTTCGCCAATTGCTCCACCTATaGGCCAAGCGTCTGTTGCCTCCTTCCGCACCTCCC +
Preference number: 6 (lower is better)
Translates to: GVGRSLRQLLHL*AKRLLPPSAPP
Trigger: GGGAGGTGCGGAAGGAGGCAACAGACGCTTGGCCCATAGGTGGAGCAATTGGCGAAGGCTTCGCCCGACGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476477.6
ENST00000544365.5
CDS CAA 90 bp CCGCTGAGAGCTCGCAGTTCCGGCGTCGGGCGAAGCCTTCGCCAATaGCTCCACCTATGGGCCAAGCGTCTGTTGCCTCCTTCCGCACCT +
Preference number: 6 (lower is better)
Translates to: PLRARSSGVGRSLRQ*LHLWAKRLLPPSAP
Trigger: AGGTGCGGAAGGAGGCAACAGACGCTTGGCCCATAGGTGGAGCAATTGGCGAAGGCTTCGCCCGACGCCGGAACTGCGAGCTCTCAGCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476477.6
ENST00000544365.5
CDS TCA 72 bp GGGGGCCTGCACAGAACACGCCCTTCACTCCACTTCTaGAGAGCAGGACACGCACTTGCCGGTCCTCCCGCA +
Preference number: 6 (lower is better)
Translates to: GGLHRTRPSLHF*RAGHALAGPPA
Trigger: TGCGGGAGGACCGGCAAGTGCGTGTCCTGCTCTTCAGAAGTGGAGTGAAGGGCGTGTTCTGTGCAGGCCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543419.5
CDS CCA 72 bp TTCCAGAGACCAGGACAGACTCAAGGCCTGTCCTCATaGAACCTACAGCCTGCCGGTCCCCCGCTGCCTCCG +
Preference number: 6 (lower is better)
Translates to: FQRPGQTQGLSS*NLQPAGPPLPP
Trigger: CGGAGGCAGCGGGGGACCGGCAGGCTGTAGGTTCCATGAGGACAGGCCTTGAGTCTGTCCTGGTCTCTGGAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371520.5
CDS CCA 72 bp AGGCCTGTCCTCATGGAACCTACAGCCTCTCAGGCCTaGAGCGGTTTGGGGCGCCTAGAACTGGGAGGGAGG +
Preference number: 6 (lower is better)
Translates to: RPVLMEPTASQA*SGLGRLELGGR
Trigger: CCTCCCTCCCAGTTCTAGGCGCCCCAAACCGCTCCAGGCCTGAGAGGCTGTAGGTTCCATGAGGACAGGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000480312.6
ENST00000544531.5
CDS CAA 72 bp GCTCGCAGTTCCGGCGTCGGGCGAAGCCTTCGCCAATaGCTCCACCTATGGGCCAAGCGTCTGTTGCCTCCT +
Preference number: 6 (lower is better)
Translates to: ARSSGVGRSLRQ*LHLWAKRLLPP
Trigger: AGGAGGCAACAGACGCTTGGCCCATAGGTGGAGCAATTGGCGAAGGCTTCGCCCGACGCCGGAACTGCGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476477.6
ENST00000544365.5
CDS GCA 72 bp CTCGCAGTTCCGGCGTCGGGCGAAGCCTTCGCCAATTaGTCCACCTATGGGCCAAGCGTCTGTTGCCTCCTT +
Preference number: 6 (lower is better)
Translates to: LAVPASGEAFAN*STYGPSVCCLL
Trigger: AAGGAGGCAACAGACGCTTGGCCCATAGGTGGAGCAATTGGCGAAGGCTTCGCCCGACGCCGGAACTGCGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000476477.6
ENST00000544365.5
CDS CCA 72 bp TTCCAGAGACCAGGACAGACTCAAGGCCTGTCCTCATaGAACCTACAGCCTTGGTCCGGACCCGCCAGGGCG +
Preference number: 6 (lower is better)
Translates to: FQRPGQTQGLSS*NLQPWSGPARA
Trigger: CGCCCTGGCGGGTCCGGACCAAGGCTGTAGGTTCCATGAGGACAGGCCTTGAGTCTGTCCTGGTCTCTGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474789.1
ENST00000544365.5
CDS CAA 72 bp ACAGACTCAAGGCCTGTCCTCATGGAACCTACAGCCTaGGTCCGGACCCGCCAGGGCGCGCACTTGGATCTC +
Preference number: 6 (lower is better)
Translates to: TDSRPVLMEPTA*VRTRQGAHLDL
Trigger: GAGATCCAAGTGCGCGCCCTGGCGGGTCCGGACCAAGGCTGTAGGTTCCATGAGGACAGGCCTTGAGTCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000474789.1
ENST00000544365.5
CDS CAA 72 bp CTTCGCCAATTGCTCCACCTATGGGCCAAGCGTCTGTaGCCTCCTTCCGCACCTCCCGGGGACAGGGAGACT +
Preference number: 6 (lower is better)
Translates to: LRQLLHLWAKRL*PPSAPPGDRET
Trigger: AGTCTCCCTGTCCCCGGGAGGTGCGGAAGGAGGCAACAGACGCTTGGCCCATAGGTGGAGCAATTGGCGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476477.6
ENST00000544365.5
CDS GCA 72 bp TTCGCCAATTGCTCCACCTATGGGCCAAGCGTCTGTTaGCTCCTTCCGCACCTCCCGGGGACAGGGAGACTT +
Preference number: 6 (lower is better)
Translates to: FANCSTYGPSVC*LLPHLPGTGRL
Trigger: AAGTCTCCCTGTCCCCGGGAGGTGCGGAAGGAGGCAACAGACGCTTGGCCCATAGGTGGAGCAATTGGCGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000476477.6
ENST00000544365.5
CDS GCA 72 bp ACCCTCTCACCTCCGTTCCTCGGTCAATGGCTACTTTaGCCAGCCGCACGGCAATGGGGGCCTAGGGAAAAG +
Preference number: 6 (lower is better)
Translates to: TLSPPFLGQWLL*PAARQWGPREK
Trigger: CTTTTCCCTAGGCCCCCATTGCCGTGCGGCTGGGCAAAGTAGCCATTGACCGAGGAACGGAGGTGAGAGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539680.1
CDS GCA 72 bp CAATGTCCACCTCCGTTCCTCGGTCAATGGCTACTTTaGCCAGCCGCACGGCAATGGGGGCCTGCACAGAAC +
Preference number: 6 (lower is better)
Translates to: QCPPPFLGQWLL*PAARQWGPAQN
Trigger: GTTCTGTGCAGGCCCCCATTGCCGTGCGGCTGGGCAAAGTAGCCATTGACCGAGGAACGGAGGTGGACATTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543419.5
CDS CCA 72 bp AAGGAAAGCAGCGAAGGACCCTGGATGGGGTGGAATTaGGCGGGTGCTGTAGTTGCGATTACCTGCCCCCGG +
Preference number: 6 (lower is better)
Translates to: KESSEGPWMGWN*AGAVVAITCPR
Trigger: CCGGGGGCAGGTAATCGCAACTACAGCACCCGCCCAATTCCACCCCATCCAGGGTCCTTCGCTGCTTTCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498544.5
CDS CAA 90 bp ACAGAACACGCCCTTCACTCCACTTCTGAAGAGCAGGACACGCACTaGCCGGTCCTCCCGCAGCTGGGCCAGAGTTTCCAGCAGCTACAG +
Preference number: 6 (lower is better)
Translates to: TEHALHSTSEEQDTH*PVLPQLGQSFQQLQ
Trigger: CTGTAGCTGCTGGAAACTCTGGCCCAGCTGCGGGAGGACCGGCAAGTGCGTGTCCTGCTCTTCAGAAGTGGAGTGAAGGGCGTGTTCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463923.5
CDS TCA 72 bp AGCGGAGGAGGTCGGGGGAAGCCCAGCTCCTCTGTGTaGTTTGGTGTAACTCTGTCAACCTCCCAGCGTCAG +
Preference number: 6 (lower is better)
Translates to: SGGGRGKPSSSV*FGVTLSTSQRQ
Trigger: CTGACGCTGGGAGGTTGACAGAGTTACACCAAATCACACAGAGGAGCTGGGCTTCCCCCGACCTCCTCCGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000476477.6
ENST00000544365.5
CDS GCA 72 bp CAATGTCCACCTCCGTTCCTCGGTCAATGGCTACTTTaGCCAGCCGCACGGCAATGGGGGCCGATGTCATTC +
Preference number: 6 (lower is better)
Translates to: QCPPPFLGQWLL*PAARQWGPMSF
Trigger: GAATGACATCGGCCCCCATTGCCGTGCGGCTGGGCAAAGTAGCCATTGACCGAGGAACGGAGGTGGACATTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000463923.5
CDS GCA 72 bp GGCATCACCCCAAGCCCTGCCCTGAGGCCACATTACTaGCAGCACAAATCTTGCAGCATGGACTGGCAGCCA +
Preference number: 6 (lower is better)
Translates to: GITPSPALRPHY*QHKSCSMDWQP
Trigger: TGGCTGCCAGTCCATGCTGCAAGATTTGTGCTGGCAGTAATGTGGCCTCAGGGCAGGGCTTGGGGTGATGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479183.6
ENST00000539680.1
CDS CAA 90 bp CACCCCAAGCCCTGCCCTGAGGCCACATTACTGCCAGCACAAATCTaGCAGCATGGACTGGCAGCCACACAGACCCGGGTTCTTTCTACT +
Preference number: 6 (lower is better)
Translates to: HPKPCPEATLLPAQI*QHGLAATQTRVLST
Trigger: AGTAGAAAGAACCCGGGTCTGTGTGGCTGCCAGTCCATGCTGCAAGATTTGTGCTGGCAGTAATGTGGCCTCAGGGCAGGGCTTGGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479183.6
ENST00000539680.1
CDS CCA 72 bp TTCCAGAGACCAGGACAGACTCAAGGCCTGTCCTCATaGAACCTACAGCCTCTCAGGCCTGGAGCGGTTTGG +
Preference number: 6 (lower is better)
Translates to: FQRPGQTQGLSS*NLQPLRPGAVW
Trigger: CCAAACCGCTCCAGGCCTGAGAGGCTGTAGGTTCCATGAGGACAGGCCTTGAGTCTGTCCTGGTCTCTGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000480312.6
ENST00000544531.5
CDS TCA 72 bp TTAGCCACACCCAAGGCATCACCCCAAGCCCTGCCCTaGGGCCACATTACTGCCAGCACAAATCTTGCAGCA +
Preference number: 6 (lower is better)
Translates to: LATPKASPQALP*GHITASTNLAA
Trigger: TGCTGCAAGATTTGTGCTGGCAGTAATGTGGCCTCAGGGCAGGGCTTGGGGTGATGCCTTGGGTGTGGCTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000479183.6
ENST00000539680.1
CDS CCA 72 bp TTGGGCTTTCAAGTCGACAGGGCTGTGTTGAAATCCTaGTCTGTGGGGCAGTGCAGAGGGGCGGGTGCATTT +
Preference number: 6 (lower is better)
Translates to: LGFQVDRAVLKS*SVGQCRGAGAF
Trigger: AAATGCACCCGCCCCTCTGCACTGCCCCACAGACCAGGATTTCAACACAGCCCTGTCGACTTGAAAGCCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539680.1
CDS TCA 72 bp TCCACCTGCAAGAAAGACGTGCTCCCTGGATTGGTCTaGCCTTGTCCATCTTCACCCACACTGGAAGCCAGC +
Preference number: 6 (lower is better)
Translates to: STCKKDVLPGLV*PCPSSPTLEAS
Trigger: GCTGGCTTCCAGTGTGGGTGAAGATGGACAAGGTCAGACCAATCCAGGGAGCACGTCTTTCTTGCAGGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479183.6
ENST00000539680.1
CDS TCA 72 bp GCCCTGTGCTGGGTGCTGGGAACTGGGAACACAGAATaGATCAGACATAGCCTTTGTTCCCATGGGGCTCAG +
Preference number: 6 (lower is better)
Translates to: ALCWVLGTGNTE*IRHSLCSHGAQ
Trigger: CTGAGCCCCATGGGAACAAAGGCTATGTCTGATTCATTCTGTGTTCCCAGTTCCCAGCACCCAGCACAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488268.5
CDS GCA 72 bp CTCCTGGGGAAGACAGGCCAGCCTTTGTATTCTCTGTaGCCCATCAGCATTAGCCTCCACTTGCACACTGCT +
Preference number: 6 (lower is better)
Translates to: LLGKTGQPLYSL*PISISLHLHTA
Trigger: AGCAGTGTGCAAGTGGAGGCTAATGCTGATGGGGCACAGAGAATACAAAGGCTGGCCTGTCTTCCCCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539680.1
CDS CCA 72 bp GGGCATGTGAGAAGGAGAGTTGGGGCTAGACCAGCCTaGTATTTTGGTGCCTGGACACCTGGTCAGTTCCTT +
Preference number: 6 (lower is better)
Translates to: GHVRRRVGARPA*YFGAWTPGQFL
Trigger: AAGGAACTGACCAGGTGTCCAGGCACCAAAATACCAGGCTGGTCTAGCCCCAACTCTCCTTCTCACATGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460612.5
CDS CCA 72 bp AGGAGGTCGGGGGAAGCCCAGCTCCTCTGTGTGATTTaGTGTAACTCTGTCAACCTCCCAGCGTCAGTGTTT +
Preference number: 6 (lower is better)
Translates to: RRSGEAQLLCVI*CNSVNLPASVF
Trigger: AAACACTGACGCTGGGAGGTTGACAGAGTTACACCAAATCACACAGAGGAGCTGGGCTTCCCCCGACCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000476477.6
ENST00000544365.5
CDS CAA 72 bp GAGCAGGGCCACAGGCCCAAAAAGAGTTGCTTAAGCTaGTCCAGCCCAAGACAAGGCCAGGGTCCAAGTGTT +
Preference number: 6 (lower is better)
Translates to: EQGHRPKKSCLS*SSPRQGQGPSV
Trigger: AACACTTGGACCCTGGCCTTGTCTTGGGCTGGACAAGCTTAAGCAACTCTTTTTGGGCCTGTGGCCCTGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000539680.1
CDS CAA 90 bp GCCAGAGTTTCCAGCAGCTCACTGACGAAGACATTCCCCAAGGCATaGCGGGCAGAAGGTCTGTTCATCAGAATCTCAGTGATCCCTGCC +
Preference number: 6 (lower is better)
Translates to: ARVSSSSLTKTFPKA*RAEGLFIRISVIPA
Trigger: GGCAGGGATCACTGAGATTCTGATGAACAGACCTTCTGCCCGCAATGCCTTGGGGAATGTCTTCGTCAGTGAGCTGCTGGAAACTCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488268.5
CDS TCA 72 bp CCTGCTACAGTCGTCCGTTCCAGCTTTGTCACAGCCTaGAATTGCCCTGACTGTTCCAGTCCATGTCCTCCT +
Preference number: 6 (lower is better)
Translates to: PATVVRSSFVTA*NCPDCSSPCPP
Trigger: AGGAGGACATGGACTGGAACAGTCAGGGCAATTTCAGGCTGTGACAAAGCTGGAACGGACGACTGTAGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460612.5
CDS TCA 72 bp TGGGCCCTGGCAATTGCTCCAGCCTCTAGGGCCCACTaGCTGGCACTTGAAAGCCTCATTCTAAGAGAAGTA +
Preference number: 6 (lower is better)
Translates to: WALAIAPASRAH*LALESLILREV
Trigger: TACTTCTCTTAGAATGAGGCTTTCAAGTGCCAGTCAGTGGGCCCTAGAGGCTGGAGCAATTGCCAGGGCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479183.6
ENST00000539680.1
CDS TCA 72 bp CACGCTTCCTGTCACCCGTTAATTTCTGAACCTTTATaGCCTGGGCCCTGGCAATTGCTCCAGCCTCTAGGG +
Preference number: 6 (lower is better)
Translates to: HASCHPLISEPL*PGPWQLLQPLG
Trigger: CCCTAGAGGCTGGAGCAATTGCCAGGGCCCAGGTCATAAAGGTTCAGAAATTAACGGGTGACAGGAAGCGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479183.6
ENST00000539680.1
CDS TCA 72 bp GCTGCCTCACCACGCTTCCTGTCACCCGTTAATTTCTaGACCTTTATGACCTGGGCCCTGGCAATTGCTCCA +
Preference number: 6 (lower is better)
Translates to: AASPRFLSPVNF*TFMTWALAIAP
Trigger: TGGAGCAATTGCCAGGGCCCAGGTCATAAAGGTTCAGAAATTAACGGGTGACAGGAAGCGTGGTGAGGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479183.6
ENST00000539680.1
CDS GCA 72 bp CAAAGGTGGAAGAAAGATGGCTGGCCCTCTTCTGTCTaGTTCAGAGAGCCGCTAAGGATCACACGAGGTACG +
Preference number: 6 (lower is better)
Translates to: QRWKKDGWPSSV*FREPLRITRGT
Trigger: CGTACCTCGTGTGATCCTTAGCGGCTCTCTGAAGCAGACAGAAGAGGGCCAGCCATCTTTCTTCCACCTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460612.5
CDS GCA 72 bp GGCCCAGCCTATGTTAACAAGCAGGCATGGGCTGGTTaGTACATACCTGGGCATAGCACATCCCTTCAATGG +
Preference number: 6 (lower is better)
Translates to: GPAYVNKQAWAG*YIPGHSTSLQW
Trigger: CCATTGAAGGGATGTGCTATGCCCAGGTATGTAGCAACCAGCCCATGCCTGCTTGTTAACATAGGCTGGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539680.1
CDS CCA 72 bp TCACCAGCAAGTCTCACCCTTCCCAAGCCTCAAAGGTaGAAGAAAGATGGCTGGCCCTCTTCTGTCTGCTTC +
Preference number: 6 (lower is better)
Translates to: SPASLTLPKPQR*KKDGWPSSVCF
Trigger: GAAGCAGACAGAAGAGGGCCAGCCATCTTTCTTCCACCTTTGAGGCTTGGGAAGGGTGAGACTTGCTGGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460612.5
CDS CCA 72 bp TGCAAAGGTATAAGCCTCCGTGGCTGCTTTGTCTCCTaGGGAAGACAGGCCAGCCTTTGTATTCTCTGTGCC +
Preference number: 6 (lower is better)
Translates to: CKGISLRGCFVS*GRQASLCILCA
Trigger: GGCACAGAGAATACAAAGGCTGGCCTGTCTTCCCCAGGAGACAAAGCAGCCACGGAGGCTTATACCTTTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539680.1
CDS CAA 90 bp GCCAGAGTTTCCAGCAGCTCACTGACGAAGACATTCCCCAAGGCATaGCGGGCAGAAGGTCTGTTCATCAGAATCTCAGTGATCCCTTGG +
Preference number: 6 (lower is better)
Translates to: ARVSSSSLTKTFPKA*RAEGLFIRISVIPW
Trigger: CCAAGGGATCACTGAGATTCTGATGAACAGACCTTCTGCCCGCAATGCCTTGGGGAATGTCTTCGTCAGTGAGCTGCTGGAAACTCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000358358.9
ENST00000371522.9
ENST00000460612.5
ENST00000467988.2
ENST00000493896.2
ENST00000495920.5
ENST00000536120.5
CDS TCA 72 bp GTCAGGAGCCCAGGCCCTTATTTCACCATGCCCCTTTaGTGGAGTTGTAAGTCACCAGCAAGTCTCACCCTT +
Preference number: 6 (lower is better)
Translates to: VRSPGPYFTMPL*WSCKSPASLTL
Trigger: AAGGGTGAGACTTGCTGGTGACTTACAACTCCATCAAAGGGGCATGGTGAAATAAGGGCCTGGGCTCCTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460612.5
CDS TCA 72 bp CTTCCTGAGTTTTTCCCAGCTGTGCTGTCTGAGCTCTaGAAGCACTGTGTCCCAGCCGCGACCAACTTTAGT +
Preference number: 6 (lower is better)
Translates to: LPEFFPAVLSEL*KHCVPAATNFS
Trigger: ACTAAAGTTGGTCGCGGCTGGGACACAGTGCTTTCAGAGCTCAGACAGCACAGCTGGGAAAAACTCAGGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000479183.6
ENST00000539680.1
CDS TCA 72 bp CACTATGGCTCTCCTCAAGCCACTCCAGGTGACTTATaGGGGACGATGGATGCGGTCAGACTGTTTGTGTTG +
Preference number: 6 (lower is better)
Translates to: HYGSPQATPGDL*GTMDAVRLFVL
Trigger: CAACACAAACAGTCTGACCGCATCCATCGTCCCTCATAAGTCACCTGGAGTGGCTTGAGGAGAGCCATAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539680.1
CDS TCA 72 bp AGAGAAGCACTATGGCTCTCCTCAAGCCACTCCAGGTaGCTTATGAGGGACGATGGATGCGGTCAGACTGTT +
Preference number: 6 (lower is better)
Translates to: REALWLSSSHSR*LMRDDGCGQTV
Trigger: AACAGTCTGACCGCATCCATCGTCCCTCATAAGTCACCTGGAGTGGCTTGAGGAGAGCCATAGTGCTTCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539680.1
CDS GCA 72 bp CCATCCCAGATGCAATGTCCACCTGCAAGAAAGACGTaGTCCCTGGATTGGTCTGACCTTGTCCATCTTCAC +
Preference number: 6 (lower is better)
Translates to: PSQMQCPPARKT*SLDWSDLVHLH
Trigger: GTGAAGATGGACAAGGTCAGACCAATCCAGGGAGCACGTCTTTCTTGCAGGTGGACATTGCATCTGGGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479183.6
ENST00000539680.1
CDS CCA 72 bp AGAGTTGGGGCTAGACCAGCCTGGTATTTTGGTGCCTaGACACCTGGTCAGTTCCTTCTCTTTGACCTGCAT +
Preference number: 6 (lower is better)
Translates to: RVGARPAWYFGA*TPGQFLLFDLH
Trigger: ATGCAGGTCAAAGAGAAGGAACTGACCAGGTGTCCAGGCACCAAAATACCAGGCTGGTCTAGCCCCAACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460612.5
CDS CAA 72 bp CCAGCCCAAGACAAGGCCAGGGTCCAAGTGTTTCCATaGTCTCTGGACTCTGATCTTGAGGCATGCAAAGGT +
Preference number: 6 (lower is better)
Translates to: PAQDKARVQVFP*SLDSDLEACKG
Trigger: ACCTTTGCATGCCTCAAGATCAGAGTCCAGAGACAATGGAAACACTTGGACCCTGGCCTTGTCTTGGGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539680.1
CDS CAA 72 bp ACAGAACCTAAGCACAGGATCAGAGATGGGGACAGGTaGACTCAGTCCCATGCCCAAGTCCGCAAATTAGGG +
Preference number: 6 (lower is better)
Translates to: TEPKHRIRDGDR*TQSHAQVRKLG
Trigger: CCCTAATTTGCGGACTTGGGCATGGGACTGAGTCAACCTGTCCCCATCTCTGATCCTGTGCTTAGGTTCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544365.5
CDS CAA 90 bp TTAATCCGTACAGAACCTAAGCACAGGATCAGAGATGGGGACAGGTaGACTCAGTCCCATGCCCAAGTCCGCAAATTAGGGATTCGGCTG +
Preference number: 6 (lower is better)
Translates to: LIRTEPKHRIRDGDR*TQSHAQVRKLGIRL
Trigger: CAGCCGAATCCCTAATTTGCGGACTTGGGCATGGGACTGAGTCAACCTGTCCCCATCTCTGATCCTGTGCTTAGGTTCTGTACGGATTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000544365.5
CDS CCA 72 bp CTCAGCATGGACCATGTGAACGTGGGCAGAAGGGAGTaGGTTTTACATTCACTCCGTCTTAGTCTTCCCCAA +
Preference number: 6 (lower is better)
Translates to: LSMDHVNVGRRE*VLHSLRLSLPQ
Trigger: TTGGGGAAGACTAAGACGGAGTGAATGTAAAACCCACTCCCTTCTGCCCACGTTCACATGGTCCATGCTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460612.5
CDS CCA 72 bp AGATGCAATGTCCACCTGCAAGAAAGACGTGCTCCCTaGATTGGTCTGACCTTGTCCATCTTCACCCACACT +
Preference number: 6 (lower is better)
Translates to: RCNVHLQERRAP*IGLTLSIFTHT
Trigger: AGTGTGGGTGAAGATGGACAAGGTCAGACCAATCCAGGGAGCACGTCTTTCTTGCAGGTGGACATTGCATCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479183.6
ENST00000539680.1
CDS CAA 72 bp GCACCCTCTGTGCTCTGCCTTGCCTTAGTTTTGCTTTaGGTTGGAAGCCAAGAACAGTGGCTGACTGCAGAA +
Preference number: 6 (lower is better)
Translates to: APSVLCLALVLL*VGSQEQWLTAE
Trigger: TTCTGCAGTCAGCCACTGTTCTTGGCTTCCAACCAAAAGCAAAACTAAGGCAAGGCAGAGCACAGAGGGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460612.5
CDS CAA 90 bp TTCTCGGCATTAAGTGGGCAGGATGAACCCCAGTACATTAGATGGTaGAGGGAAAAGTCCCAGAGAGAAGCACTATGGCTCTCCTCAAGC +
Preference number: 6 (lower is better)
Translates to: FSALSGQDEPQYIRW*REKSQREALWLSSS
Trigger: GCTTGAGGAGAGCCATAGTGCTTCTCTCTGGGACTTTTCCCTCAACCATCTAATGTACTGGGGTTCATCCTGCCCACTTAATGCCGAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539680.1
CDS TCA 72 bp GACTTGGACAGAATGGGAAGACTGGACATTGCTCTTTaGCCTCCTTGGCTCGTAACAGCAATTGCTCTGAGG +
Preference number: 6 (lower is better)
Translates to: DLDRMGRLDIAL*PPWLVTAIALR
Trigger: CCTCAGAGCAATTGCTGTTACGAGCCAAGGAGGTCAAAGAGCAATGTCCAGTCTTCCCATTCTGTCCAAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460612.5
CDS TCA 72 bp ACGAACGTGAAGGATGTCCAGCAGCTGCTACACGCTTaGAAGGCAAATCAAAACAGTGAGGTACTGTGCCCT +
Preference number: 6 (lower is better)
Translates to: TNVKDVQQLLHA*KANQNSEVLCP
Trigger: AGGGCACAGTACCTCACTGTTTTGATTTGCCTTTCAAGCGTGTAGCAGCTGCTGGACATCCTTCACGTTCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539680.1
CDS TCA 72 bp ACTTCTAGGCTGGTGTCATCACTGATGACCCAGCTGTaGTTTTACAGCTGTGAGATTGCAGTGCAGGGAGGT +
Preference number: 6 (lower is better)
Translates to: TSRLVSSLMTQL*FYSCEIAVQGG
Trigger: ACCTCCCTGCACTGCAATCTCACAGCTGTAAAATCACAGCTGGGTCATCAGTGATGACACCAGCCTAGAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539680.1
CDS TCA 72 bp GGCTACAACCAAGCCCTTGACCTCCCAACTCCATCCTaGACTTTACAGTGGCATCTGATACAGAGGCAAAAG +
Preference number: 6 (lower is better)
Translates to: GYNQALDLPTPS*TLQWHLIQRQK
Trigger: CTTTTGCCTCTGTATCAGATGCCACTGTAAAGTTCAGGATGGAGTTGGGAGGTCAAGGGCTTGGTTGTAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539680.1
CDS TCA 72 bp TTTAATAGGTCAGTCCCAAGTGTACAGCCCCTACATTaGACACAGCCTGCAGGCTACAACCAAGCCCTTGAC +
Preference number: 6 (lower is better)
Translates to: FNRSVPSVQPLH*TQPAGYNQALD
Trigger: GTCAAGGGCTTGGTTGTAGCCTGCAGGCTGTGTTCAATGTAGGGGCTGTACACTTGGGACTGACCTATTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539680.1
CDS GCA 72 bp CACTTCCTCGACCTCATTTCAGCAAATGCCAGCCTCTaGGGTAAGGTTTTACCCCAGCAGAGTGAAACAAAG +
Preference number: 6 (lower is better)
Translates to: HFLDLISANASL*GKVLPQQSETK
Trigger: CTTTGTTTCACTCTGCTGGGGTAAAACCTTACCGCAGAGGCTGGCATTTGCTGAAATGAGGTCGAGGAAGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539680.1
CDS CCA 72 bp CTCTGTGCTCTGCCTTGCCTTAGTTTTGCTTTTGGTTaGAAGCCAAGAACAGTGGCTGACTGCAGAATGTCC +
Preference number: 6 (lower is better)
Translates to: LCALPCLSFAFG*KPRTVADCRMS
Trigger: GGACATTCTGCAGTCAGCCACTGTTCTTGGCTTCCAACCAAAAGCAAAACTAAGGCAAGGCAGAGCACAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460612.5
CDS CCA 72 bp GCACTTGGCTGTGTTTATCCAATCATTGGTGAGACTTaGATTGGACTCCCAACCACCTTTCCCACTTCCTCG +
Preference number: 6 (lower is better)
Translates to: ALGCVYPIIGET*IGLPTTFPTSS
Trigger: CGAGGAAGTGGGAAAGGTGGTTGGGAGTCCAATCCAAGTCTCACCAATGATTGGATAAACACAGCCAAGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539680.1
CDS CAA 72 bp ATCCAGCAGGTGCCCAGAGGAGTGTTTCCCAATCCTTaGGCCTTCAAAGACCCCTTATTATTATCTCCCAGG +
Preference number: 6 (lower is better)
Translates to: IQQVPRGVFPNP*AFKDPLLLSPR
Trigger: CCTGGGAGATAATAATAAGGGGTCTTTGAAGGCCAAAGGATTGGGAAACACTCCTCTGGGCACCTGCTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000476477.6
CDS CAA 72 bp TCCCTCAGAGATTATCTGTGGAGGAGCCTGGGGTATTaGACCTACAGGGTTTCTCAAAGCCTGGGTTTTGCT +
Preference number: 6 (lower is better)
Translates to: SLRDYLWRSLGY*TYRVSQSLGFA
Trigger: AGCAAAACCCAGGCTTTGAGAAACCCTGTAGGTCAAATACCCCAGGCTCCTCCACAGATAATCTCTGAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493896.2
CDS CAA 72 bp TTGTATTCTCTGTGCCCCATCAGCATTAGCCTCCACTaGCACACTGCTTTCATGCCTCCTGAGAACTCAGCT +
Preference number: 6 (lower is better)
Translates to: LYSLCPISISLH*HTAFMPPENSA
Trigger: AGCTGAGTTCTCAGGAGGCATGAAAGCAGTGTGCAAGTGGAGGCTAATGCTGATGGGGCACAGAGAATACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539680.1
CDS CAA 90 bp CTGACCTTGTCCATCTTCACCCACACTGGAAGCCAGCCCACCCTATaGCCTACAGACATCTATATGAGCAGAGATAGCTATGAGAAGGAA +
Preference number: 6 (lower is better)
Translates to: LTLSIFTHTGSQPTL*PTDIYMSRDSYEKE
Trigger: TTCCTTCTCATAGCTATCTCTGCTCATATAGATGTCTGTAGGCAATAGGGTGGGCTGGCTTCCAGTGTGGGTGAAGATGGACAAGGTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479183.6
ENST00000539680.1
CDS CAA 90 bp CTCTGTCTTTCCCTCAGAGATTATCTGTGGAGGAGCCTGGGGTATTaGACCTACAGGGTTTCTCAAAGCCTGGGTTTTGCTAACTGCACA +
Preference number: 6 (lower is better)
Translates to: LCLSLRDYLWRSLGY*TYRVSQSLGFANCT
Trigger: TGTGCAGTTAGCAAAACCCAGGCTTTGAGAAACCCTGTAGGTCAAATACCCCAGGCTCCTCCACAGATAATCTCTGAGGGAAAGACAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493896.2
CDS TCA 72 bp AAGATGTGGTTCTTCCTCTTAAGGACCTGTGTTCTGTaGTTCTCGGCATTAAGTGGGCAGGATGAACCCCAG +
Preference number: 6 (lower is better)
Translates to: KMWFFLLRTCVL*FSALSGQDEPQ
Trigger: CTGGGGTTCATCCTGCCCACTTAATGCCGAGAATCACAGAACACAGGTCCTTAAGAGGAAGAACCACATCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539680.1
CDS GCA 72 bp ACCTACAGGGTTTCTCAAAGCCTGGGTTTTGCTAACTaGACAATCACGGGGACAGATCAATATGCTCCTCTG +
Preference number: 6 (lower is better)
Translates to: TYRVSQSLGFAN*TITGTDQYAPL
Trigger: CAGAGGAGCATATTGATCTGTCCCCGTGATTGTGCAGTTAGCAAAACCCAGGCTTTGAGAAACCCTGTAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493896.2
CDS CAA 72 bp GTCAAAGTTCACAACAGTATGTGGAAGAGCAGGTCTTaGAACCCAGACAGCCTAGTGCCTCGAACTTGCACT +
Preference number: 6 (lower is better)
Translates to: VKVHNSMWKSRS*NPDSLVPRTCT
Trigger: AGTGCAAGTTCGAGGCACTAGGCTGTCTGGGTTCAAAGACCTGCTCTTCCACATACTGTTGTGAACTTTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479183.6
ENST00000539680.1
CDS CAA 72 bp AAACTCTGGAACCATTTGCTACCCTATCAGAGTGGTTaGTCCACTAGATGGTGGCCATCTACACCATCCCTG +
Preference number: 6 (lower is better)
Translates to: KLWNHLLPYQSG*STRWWPSTPSL
Trigger: CAGGGATGGTGTAGATGGCCACCATCTAGTGGACAAACCACTCTGATAGGGTAGCAAATGGTTCCAGAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539680.1
CDS CAA 72 bp AGAGAGAGGGATTGGGAAATGAAGGGCTGTTTGGGTTaGCTTGTGACTGAAGGGTTACTGGGATATGGGACT +
Preference number: 6 (lower is better)
Translates to: RERDWEMKGCLG*LVTEGLLGYGT
Trigger: AGTCCCATATCCCAGTAACCCTTCAGTCACAAGCAAACCCAAACAGCCCTTCATTTCCCAATCCCTCTCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539680.1
CDS CAA 72 bp TTGGCTGTGTTTATCCAATCATTGGTGAGACTTGGATaGGACTCCCAACCACCTTTCCCACTTCCTCGACCT +
Preference number: 6 (lower is better)
Translates to: LAVFIQSLVRLG*DSQPPFPLPRP
Trigger: AGGTCGAGGAAGTGGGAAAGGTGGTTGGGAGTCCAATCCAAGTCTCACCAATGATTGGATAAACACAGCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539680.1
CDS CAA 72 bp ACAGCTGTGAGATTGCAGTGCAGGGAGGTGAAGCACTaGGCTGTGTTTATCCAATCATTGGTGAGACTTGGA +
Preference number: 6 (lower is better)
Translates to: TAVRLQCREVKH*AVFIQSLVRLG
Trigger: TCCAAGTCTCACCAATGATTGGATAAACACAGCCAAGTGCTTCACCTCCCTGCACTGCAATCTCACAGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539680.1
CDS CAA 72 bp TTAAGTGGGCAGGATGAACCCCAGTACATTAGATGGTaGAGGGAAAAGTCCCAGAGAGAAGCACTATGGCTC +
Preference number: 6 (lower is better)
Translates to: LSGQDEPQYIRW*REKSQREALWL
Trigger: GAGCCATAGTGCTTCTCTCTGGGACTTTTCCCTCAACCATCTAATGTACTGGGGTTCATCCTGCCCACTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539680.1
CDS CAA 90 bp TGTGATTTTACAGCTGTGAGATTGCAGTGCAGGGAGGTGAAGCACTaGGCTGTGTTTATCCAATCATTGGTGAGACTTGGATTGGACTCC +
Preference number: 6 (lower is better)
Translates to: CDFTAVRLQCREVKH*AVFIQSLVRLGLDS
Trigger: GGAGTCCAATCCAAGTCTCACCAATGATTGGATAAACACAGCCAAGTGCTTCACCTCCCTGCACTGCAATCTCACAGCTGTAAAATCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539680.1
CDS TCA 72 bp CCAAGAAGGCTGCTCCTAATCACCAGGTCAGTCACCTaGGAAAATGATCAGTTATCTTCTTTATCCCCTCCC +
Preference number: 6 (lower is better)
Translates to: PRRLLLITRSVT*ENDQLSSLSPP
Trigger: GGGAGGGGATAAAGAAGATAACTGATCATTTTCTCAGGTGACTGACCTGGTGATTAGGAGCAGCCTTCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000460612.5
CDS TCA 72 bp GAAGCCAGCCCACCCTATTGCCTACAGACATCTATATaGGCAGAGATAGCTATGAGAAGGAATTTCCCTCCT +
Preference number: 6 (lower is better)
Translates to: EASPPYCLQTSI*AEIAMRRNFPP
Trigger: AGGAGGGAAATTCCTTCTCATAGCTATCTCTGCTCATATAGATGTCTGTAGGCAATAGGGTGGGCTGGCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000479183.6
ENST00000539680.1
CDS GCA 72 bp TGCATTTTAATACAGCCACATAGAAGCAACAGTGTCTaGTTTGTCACTGGCCTTGGTTCCACACCAGCCCTA +
Preference number: 6 (lower is better)
Translates to: CILIQPHRSNSV*FVTGLGSTPAL
Trigger: TAGGGCTGGTGTGGAACCAAGGCCAGTGACAAAGCAGACACTGTTGCTTCTATGTGGCTGTATTAAAATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539680.1
CDS CAA 72 bp AGAAGCCAGACTCTGATCCCTGAACACCTGGGTTTCTaGTTATTCAGCCCATCCTTCCAACATGCACAACAT +
Preference number: 6 (lower is better)
Translates to: RSQTLIPEHLGF*LFSPSFQHAQH
Trigger: ATGTTGTGCATGTTGGAAGGATGGGCTGAATAACAAGAAACCCAGGTGTTCAGGGATCAGAGTCTGGCTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539680.1
CDS CCA 72 bp ACAAAGCTCAATTGCTCAGAACAAGTAATGCAAATTTaGCTGGTGCCAGTATTCCTGCCCAGGCACCTTTGT +
Preference number: 6 (lower is better)
Translates to: TKLNCSEQVMQI*LVPVFLPRHLC
Trigger: ACAAAGGTGCCTGGGCAGGAATACTGGCACCAGCCAAATTTGCATTACTTGTTCTGAGCAATTGAGCTTTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460612.5
CDS CAA 72 bp AACAAAGCTCAATTGCTCAGAACAAGTAATGCAAATTaGGCTGGTGCCAGTATTCCTGCCCAGGCACCTTTG +
Preference number: 6 (lower is better)
Translates to: NKAQLLRTSNAN*AGASIPAQAPL
Trigger: CAAAGGTGCCTGGGCAGGAATACTGGCACCAGCCAAATTTGCATTACTTGTTCTGAGCAATTGAGCTTTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460612.5
CDS CAA 90 bp ATCTCAGGCAAAGGTAACAGCAATTGTCAAAACTTGAAAGCATGCTaGGGGAAACTTAACTGCTTTGGAATGGCCAGGCTTGAACCCGAT +
Preference number: 6 (lower is better)
Translates to: ISGKGNSNCQNLKAC*GKLNCFGMARLEPD
Trigger: ATCGGGTTCAAGCCTGGCCATTCCAAAGCAGTTAAGTTTCCCCAAGCATGCTTTCAAGTTTTGACAATTGCTGTTACCTTTGCCTGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488268.5
CDS TCA 72 bp AGGTCTAGATATGAAAGCTGCAATCAGCCACTCCATTaGGTGACCCAGAGTTCTGTATTAGTTCGGAGACTT +
Preference number: 6 (lower is better)
Translates to: RSRYESCNQPLH*VTQSSVLVRRL
Trigger: AAGTCTCCGAACTAATACAGAACTCTGGGTCACTCAATGGAGTGGCTGATTGCAGCTTTCATATCTAGACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000539680.1
CDS GCA 72 bp GGTACGACGCTTGGAACAAGGAGAGTTCCTAGGAGGTaGCCCATATCTATTTGTGGATTACTATTAATAGGT +
Preference number: 6 (lower is better)
Translates to: GTTLGTRRVPRR*PISICGLLLIG
Trigger: ACCTATTAATAGTAATCCACAAATAGATATGGGGCACCTCCTAGGAACTCTCCTTGTTCCAAGCGTCGTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000460612.5
CDS TCA 72 bp GTCTCATGGGGAAGACAAATGTGTATCAGGCATTATTaGCCCAGGATCATCAGTGCTCCAATAAAAAGCTCA +
Preference number: 6 (lower is better)
Translates to: VSWGRQMCIRHY*PRIISAPIKSS
Trigger: TGAGCTTTTTATTGGAGCACTGATGATCCTGGGTCAATAATGCCTGATACACATTTGTCTTCCCCATGAGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488268.5
CDS TCA 72 bp TATGAGGGACGATGGATGCGGTCAGACTGTTTGTGTTaGGAAGAACCTTCTAAAATTGGTCATGTACCATAC +
Preference number: 6 (lower is better)
Translates to: YEGRWMRSDCLC*EEPSKIGHVPY
Trigger: GTATGGTACATGACCAATTTTAGAAGGTTCTTCTCAACACAAACAGTCTGACCGCATCCATCGTCCCTCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000539680.1
CDS CCA 72 bp TCACCTTTTTCCGAAACATGGTCGATAAATCTGACTTaGACAGAATGGGAAGACTGGACATTGCTCTTTGAC +
Preference number: 6 (lower is better)
Translates to: SPFSETWSINLT*TEWEDWTLLFD
Trigger: GTCAAAGAGCAATGTCCAGTCTTCCCATTCTGTCCAAGTCAGATTTATCGACCATGTTTCGGAAAAAGGTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000460612.5
CDS CCA 72 bp GCAACTAAATACAGAGGCTTAGTGTTCTGTCCTGTTTaGCAAGACAGTAATCCTGGCCCTACTTGTGTAATA +
Preference number: 6 (lower is better)
Translates to: ATKYRGLVFCPV*QDSNPGPTCVI
Trigger: TATTACACAAGTAGGGCCAGGATTACTGTCTTGCCAAACAGGACAGAACACTAAGCCTCTGTATTTAGTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493896.2
CDS CAA 72 bp AGTCTCATGGGGAAGACAAATGTGTATCAGGCATTATaGACCCAGGATCATCAGTGCTCCAATAAAAAGCTC +
Preference number: 6 (lower is better)
Translates to: SLMGKTNVYQAL*TQDHQCSNKKL
Trigger: GAGCTTTTTATTGGAGCACTGATGATCCTGGGTCAATAATGCCTGATACACATTTGTCTTCCCCATGAGACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488268.5
CDS CAA 72 bp TTCTTTATCCCCTCCCATTCTTCAAACAAAGCTCAATaGCTCAGAACAAGTAATGCAAATTTGGCTGGTGCC +
Preference number: 6 (lower is better)
Translates to: FFIPSHSSNKAQ*LRTSNANLAGA
Trigger: GGCACCAGCCAAATTTGCATTACTTGTTCTGAGCAATTGAGCTTTGTTTGAAGAATGGGAGGGGATAAAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460612.5
CDS CAA 72 bp AGAAGGTCTCAACTCTGGGATTACTCATGCCAGTACTaGTTTTTGGTAGACTGGTGTTTTGGTATACAAAGC +
Preference number: 6 (lower is better)
Translates to: RRSQLWDYSCQY*FLVDWCFGIQS
Trigger: GCTTTGTATACCAAAACACCAGTCTACCAAAAACAAGTACTGGCATGAGTAATCCCAGAGTTGAGACCTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000539680.1
CDS CAA 90 bp TCAGTTATCTTCTTTATCCCCTCCCATTCTTCAAACAAAGCTCAATaGCTCAGAACAAGTAATGCAAATTTGGCTGGTGCCAGTATTCCT +
Preference number: 6 (lower is better)
Translates to: SVIFFIPSHSSNKAQ*LRTSNANLAGASIP
Trigger: AGGAATACTGGCACCAGCCAAATTTGCATTACTTGTTCTGAGCAATTGAGCTTTGTTTGAAGAATGGGAGGGGATAAAGAAGATAACTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000460612.5
CDS GCA 72 bp TTTCACCTCAGACCAGCAAATACTAAAATATCAATATaGCTACTACTGCCGAGACTGGGGAAACCAGTATTT +
Preference number: 6 (lower is better)
Translates to: FHLRPANTKISI*LLLPRLGKPVF
Trigger: AAATACTGGTTTCCCCAGTCTCGGCAGTAGTAGGCATATTGATATTTTAGTATTTGCTGGTCTGAGGTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539680.1
CDS GCA 72 bp ACCCGGCCATTTCTTTATAATTTTATCACCCAGGTGTaGATCCTTAGGTATCATAGTTTAGACTTGCTAATT +
Preference number: 6 (lower is better)
Translates to: TRPFLYNFITQV*ILRYHSLDLLI
Trigger: AATTAGCAAGTCTAAACTATGATACCTAAGGATGCACACCTGGGTGATAAAATTATAAAGAAATGGCCGGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000493896.2
CDS GCA 72 bp GACCAGCAAATACTAAAATATCAATATGCCTACTACTaGCGAGACTGGGGAAACCAGTATTTACATACATTA +
Preference number: 6 (lower is better)
Translates to: DQQILKYQYAYY*RDWGNQYLHTL
Trigger: TAATGTATGTAAATACTGGTTTCCCCAGTCTCGGCAGTAGTAGGCATATTGATATTTTAGTATTTGCTGGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000539680.1
CDS CAA 72 bp ACCCAGGTGTGCATCCTTAGGTATCATAGTTTAGACTaGCTAATTTCTAAAATTGCCGTGTATCTTTTAAAT +
Preference number: 6 (lower is better)
Translates to: TQVCILRYHSLD*LISKIAVYLLN
Trigger: ATTTAAAAGATACACGGCAATTTTAGAAATTAGCAAGTCTAAACTATGATACCTAAGGATGCACACCTGGGT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000493896.2