RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ECHDC1 (Homo sapiens)

Ensembl gene IDs: ENSG00000093144

Ensembl transcript IDs: ENST00000368289.6, ENST00000368291.6, ENST00000368292.10, ENST00000368295.8, ENST00000417628.6, ENST00000430841.6, ENST00000436638.5, ENST00000454591.6, ENST00000454859.8, ENST00000461239.2, ENST00000474240.1, ENST00000474289.6, ENST00000475319.1, ENST00000479525.6, ENST00000488087.1, ENST00000525745.5, ENST00000526299.5, ENST00000528402.5, ENST00000531582.1, ENST00000531967.5, ENST00000534442.5

Found 438 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGCCGGGTGGTGCCACCCCAGCTTGGTATTATGCCCATCTCTTTGTaGACGAATCTGATCTTACTCTCTGGAGTCATTAACCTGAAATCA +
Preference number: 1 (lower is better)
Translates to: SRVVPPQLGIMPISL*TNLILLSGVINLKS
Trigger: TGATTTCAGGTTAATGACTCCAGAGAGTAAGATCAGATTCGTCCACAAAGAGATGGGCATAATACCAAGCTGGGGTGGCACCACCCGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
3UTR TCA 90 bp TCACATGCTGTAGTAAATTCTGCTCCTCCACCCAATGCCCAACCTTaGACCAGCGCAACACTTATTAAAGGAAGTCTTGATAGGCCAAGA +
Preference number: 1 (lower is better)
Translates to: SHAVVNSAPPPNAQP*TSATLIKGSLDRPR
Trigger: TCTTGGCCTATCAAGACTTCCTTTAATAAGTGTTGCGCTGGTTCAAGGTTGGGCATTGGGTGGAGGAGCAGAATTTACTACAGCATGTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368292.10
ENST00000417628.6
3UTR GCA 90 bp GCAACACTTATTAAAGGAAGTCTCATAAATCTTGTTAAGGTGTTTTaGATGAACATGCATACGGCCATTCCATCCTCTGGAGTTCCTAGT +
Preference number: 1 (lower is better)
Translates to: ATLIKGSLINLVKVF*MNMHTAIPSSGVPS
Trigger: ACTAGGAACTCCAGAGGATGGAATGGCCGTATGCATGTTCATGCAAAACACCTTAACAAGATTTATGAGACTTCCTTTAATAAGTGTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526299.5
3UTR-3UTR CCA 90 bp CTAGCCGGGTGGTGCCACCCCAGCTTGGTATTATGCCCATCTCTTTGTGGACGATTTCAACTAGCCGGGTaGTGCCACCCCAGCTTGGTA +
Preference number: 2 (lower is better)
Translates to: LAGWCHPSLVLCPSLCGRFQLAG*CHPSLV
Trigger: TACCAAGCTGGGGTGGCACCACCCGGCTAGTTGAAA...TCGTCCACAAAGAGATGGGCATAATACCAAGCTGGGGTGGCACCACCCGGCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
3UTR-3UTR GCA 90 bp GCTTGTCTACTTCCGATTATTTCAACTAGCCGGGTGGTGCCACCCCAGCTTGGTCAACTAGCCGGGTGGTaGCACCCCAGCTTGGTATTA +
Preference number: 2 (lower is better)
Translates to: ACLLPIISTSRVVPPQLGQLAGW*HPSLVL
Trigger: TAATACCAAGCTGGGGTGGCACCACCCGGCTAGTTG...ACCAAGCTGGGGTGGCACCACCCGGCTAGTTGAAATAATCGGAAGTAGACAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
3UTR-3UTR CCA 90 bp GAGCTTGTCTACTTCCGATTATTTCAACTAGCCGGGTGGTGCCACCCCAGCTTGTTTCAACTAGCCGGGTaGTGCCACCCCAGCTTGGTA +
Preference number: 2 (lower is better)
Translates to: ELVYFRLFQLAGWCHPSLFQLAG*CHPSLV
Trigger: TACCAAGCTGGGGTGGCACCACCCGGCTAGTTGAAA...CAAGCTGGGGTGGCACCACCCGGCTAGTTGAAATAATCGGAAGTAGACAAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
3UTR-3UTR TCA 90 bp GCTTGTCTACTTCCGATTATTTCAACTAGCCGGGTGGTGCCACCCCAGCTTGGTCCCCACTCAACACTTTaGGAGCTTGTCTACTTCCGA +
Preference number: 2 (lower is better)
Translates to: ACLLPIISTSRVVPPQLGPHSTL*ELVYFR
Trigger: TCGGAAGTAGACAAGCTCTCAAAGTGTTGAGTGGGG...ACCAAGCTGGGGTGGCACCACCCGGCTAGTTGAAATAATCGGAAGTAGACAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
3UTR-3UTR TCA 90 bp CCAGGTTCAAGCAATCCTTCCACCTCAGACTCCCAAGTTGTAGGACTACAGGCACTGGTCTCAAACTCCTaGCCTCAGGTGATCTGCCTA +
Preference number: 2 (lower is better)
Translates to: PGSSNPSTSDSQVVGLQALVSNS*PQVICL
Trigger: TAGGCAGATCACCTGAGGTCAGGAGTTTGAGACCAG...TGCCTGTAGTCCTACAACTTGGGAGTCTGAGGTGGAAGGATTGCTTGAACCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461239.2
3UTR-3UTR GCA 90 bp CCGGGTGGTGCCACCCCAGCTTGGTATTATGCCCATCTCTTTGTGGACGAATCTCCCAGCTTGGTATTATaGCCATCTCTTTGTGGACGA +
Preference number: 2 (lower is better)
Translates to: PGGATPAWYYAHLFVDESPSLVL*PSLCGR
Trigger: TCGTCCACAAAGAGATGGGCATAATACCAAGCTGGG...AGATTCGTCCACAAAGAGATGGGCATAATACCAAGCTGGGGTGGCACCACCCGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
3UTR-3UTR TCA 90 bp TTTCAACTAGCCGGGTGGTGCCACCCCAGCTTGGTATTATGCCCATCTCTTTGTCCCAATGCCCAACCTTaGACCAGCGCAACACTTATT +
Preference number: 2 (lower is better)
Translates to: FQLAGWCHPSLVLCPSLCPNAQP*TSATLI
Trigger: AATAAGTGTTGCGCTGGTTCAAGGTTGGGCATTGGG...ACAAAGAGATGGGCATAATACCAAGCTGGGGTGGCACCACCCGGCTAGTTGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368292.10
ENST00000417628.6
3UTR-3UTR GCA 90 bp CGATTATTTCAACTAGCCGGGTGGTGCCACCCCAGCTTGGTATTATGCCCATCTCCCAGCTTGGTATTATaGCCATCTCTTTGTGGACGA +
Preference number: 2 (lower is better)
Translates to: RLFQLAGWCHPSLVLCPSPSLVL*PSLCGR
Trigger: TCGTCCACAAAGAGATGGGCATAATACCAAGCTGGG...AGATGGGCATAATACCAAGCTGGGGTGGCACCACCCGGCTAGTTGAAATAATCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
3UTR-3UTR GCA 90 bp GAATCCAGTTTAAGGGCCCCACTCAACACTTTGAGAGCTTGTCTACTTCCGATTCAACTAGCCGGGTGGTaGCACCCCAGCTTGGTATTA +
Preference number: 2 (lower is better)
Translates to: ESSLRAPLNTLRACLLPIQLAGW*HPSLVL
Trigger: TAATACCAAGCTGGGGTGGCACCACCCGGCTAGTTG...AATCGGAAGTAGACAAGCTCTCAAAGTGTTGAGTGGGGCCCTTAAACTGGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
3UTR-3UTR CCA 90 bp CCGGGTGGTGCCACCCCAGCTTGGTATTATGCCCATCTCTTTGTGGACGAATCTATGCCCATCTCTTTGTaGACGAATCTGATCTTACTC +
Preference number: 2 (lower is better)
Translates to: PGGATPAWYYAHLFVDESMPISL*TNLILL
Trigger: GAGTAAGATCAGATTCGTCCACAAAGAGATGGGCAT...AGATTCGTCCACAAAGAGATGGGCATAATACCAAGCTGGGGTGGCACCACCCGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
3UTR-3UTR CCA 90 bp AACCTGAAATCACATGCTGTAGTAAATTCTGCTCCTCCACCCAATGCCCAACCTTTTCAACTAGCCGGGTaGTGCCACCCCAGCTTGGTA +
Preference number: 2 (lower is better)
Translates to: NLKSHAVVNSAPPPNAQPFQLAG*CHPSLV
Trigger: TACCAAGCTGGGGTGGCACCACCCGGCTAGTTGAAA...AGGTTGGGCATTGGGTGGAGGAGCAGAATTTACTACAGCATGTGATTTCAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
3UTR CAA 90 bp ACTAGCCGGGTGGTGCCACCCCAGCTTGGTATTATGCCCATCTCTTaGTGGACGAATCTGATCTTACTCTCTGGAGTCATTAACCTGAAA +
Preference number: 2 (lower is better)
Translates to: TSRVVPPQLGIMPIS*WTNLILLSGVINLK
Trigger: TTTCAGGTTAATGACTCCAGAGAGTAAGATCAGATTCGTCCACAAAGAGATGGGCATAATACCAAGCTGGGGTGGCACCACCCGGCTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
3UTR-3UTR TCA 90 bp ATTTCAACTAGCCGGGTGGTGCCACCCCAGCTTGGTATTATGCCCATCTCTTTGCTTTGTGGACGAATCTaGTCTTACTCTCTGGAGTCA +
Preference number: 2 (lower is better)
Translates to: ISTSRVVPPQLGIMPISLLCGRI*SYSLES
Trigger: TGACTCCAGAGAGTAAGATCAGATTCGTCCACAAAG...CAAAGAGATGGGCATAATACCAAGCTGGGGTGGCACCACCCGGCTAGTTGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
3UTR-3UTR TCA 90 bp CTGGAGTTCCTAGTGATTTCACAGCATTCAGATCAGATCCTGAAGAGAAAGTATTTGCCCCACGGACAATaGGGCCTTTCCCCTCTGTCC +
Preference number: 2 (lower is better)
Translates to: LEFLVISQHSDQILKRKYLPHGQ*GLSPLS
Trigger: GGACAGAGGGGAAAGGCCTCATTGTCCGTGGGGCAA...ATACTTTCTCTTCAGGATCTGATCTGAATGCTGTGAAATCACTAGGAACTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526299.5
3UTR-3UTR GCA 90 bp CCGGGTGGTGCCACCCCAGCTTGGTATTATGCCCATCTCTTTGTGGACGAATCTGTTTCATCTGAAGACTaGAAGACCTCTTCAACCATT +
Preference number: 2 (lower is better)
Translates to: PGGATPAWYYAHLFVDESVSSED*KTSSTI
Trigger: AATGGTTGAAGAGGTCTTGCAGTCTTCAGATGAAAC...AGATTCGTCCACAAAGAGATGGGCATAATACCAAGCTGGGGTGGCACCACCCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
3UTR-3UTR CCA 90 bp TTTCCTTTCTTAGCAATAGCCTCTAAATTTGCAGGCCCACCCCAAACTGTTCCTTTTCAACTAGCCGGGTaGTGCCACCCCAGCTTGGTA +
Preference number: 2 (lower is better)
Translates to: FPFLAIASKFAGPPQTVPFQLAG*CHPSLV
Trigger: TACCAAGCTGGGGTGGCACCACCCGGCTAGTTGAAA...AGGAACAGTTTGGGGTGGGCCTGCAAATTTAGAGGCTATTGCTAAGAAAGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368295.8
ENST00000479525.6
ENST00000528402.5
3UTR-3UTR TCA 90 bp CCACTCAACACTTTGAGAGCTTGTCTACTTCCGATTATTTCAACTAGCCGGGTGCCCCACTCAACACTTTaGGAGCTTGTCTACTTCCGA +
Preference number: 2 (lower is better)
Translates to: PLNTLRACLLPIISTSRVPHSTL*ELVYFR
Trigger: TCGGAAGTAGACAAGCTCTCAAAGTGTTGAGTGGGG...CACCCGGCTAGTTGAAATAATCGGAAGTAGACAAGCTCTCAAAGTGTTGAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
3UTR-3UTR GCA 90 bp AGTTTAAGGGCCCCACTCAACACTTTGAGAGCTTGTCTACTTCCGATTATTTCACAACTAGCCGGGTGGTaGCACCCCAGCTTGGTATTA +
Preference number: 2 (lower is better)
Translates to: SLRAPLNTLRACLLPIISQLAGW*HPSLVL
Trigger: TAATACCAAGCTGGGGTGGCACCACCCGGCTAGTTG...TGAAATAATCGGAAGTAGACAAGCTCTCAAAGTGTTGAGTGGGGCCCTTAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
3UTR-3UTR GCA 90 bp ATCACATGCTGTAGTAAATTCTGCTCCTCCACCCAATGCCCAACCTTGAACCAGTGCTGTAGTAAATTCTaGTCCTCCACCCAATGCCCA +
Preference number: 2 (lower is better)
Translates to: ITCCSKFCSSTQCPTLNQCCSKF*SSTQCP
Trigger: TGGGCATTGGGTGGAGGAGCAGAATTTACTACAGCA...CTGGTTCAAGGTTGGGCATTGGGTGGAGGAGCAGAATTTACTACAGCATGTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
3UTR-3UTR CCA 90 bp TTTCAACTAGCCGGGTGGTGCCACCCCAGCTTGGTATTATGCCCATCTCTTTGTATGCCCATCTCTTTGTaGACGAATCTGATCTTACTC +
Preference number: 2 (lower is better)
Translates to: FQLAGWCHPSLVLCPSLCMPISL*TNLILL
Trigger: GAGTAAGATCAGATTCGTCCACAAAGAGATGGGCAT...ACAAAGAGATGGGCATAATACCAAGCTGGGGTGGCACCACCCGGCTAGTTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
3UTR-3UTR CCA 90 bp CTCAACACTTTGAGAGCTTGTCTACTTCCGATTATTTCAACTAGCCGGGTGGTGGGTGCCACCCCAGCTTaGTATTATGCCCATCTCTTT +
Preference number: 2 (lower is better)
Translates to: LNTLRACLLPIISTSRVVGATPA*YYAHLF
Trigger: AAAGAGATGGGCATAATACCAAGCTGGGGTGGCACC...CACCACCCGGCTAGTTGAAATAATCGGAAGTAGACAAGCTCTCAAAGTGTTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
3UTR-3UTR CCA 90 bp CCACTCAACACTTTGAGAGCTTGTCTACTTCCGATTATTTCAACTAGCCGGGTGGGTGCCACCCCAGCTTaGTATTATGCCCATCTCTTT +
Preference number: 2 (lower is better)
Translates to: PLNTLRACLLPIISTSRVGATPA*YYAHLF
Trigger: AAAGAGATGGGCATAATACCAAGCTGGGGTGGCACC...CACCCGGCTAGTTGAAATAATCGGAAGTAGACAAGCTCTCAAAGTGTTGAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
3UTR-3UTR CCA 90 bp CCCCAGCTTGGTATTATGCCCATCTCTTTGTGGACGAATCTGATCTTACTCTCTGGTGCCACCCCAGCTTaGTATTATGCCCATCTCTTT +
Preference number: 2 (lower is better)
Translates to: PQLGIMPISLWTNLILLSGATPA*YYAHLF
Trigger: AAAGAGATGGGCATAATACCAAGCTGGGGTGGCACC...AGAGAGTAAGATCAGATTCGTCCACAAAGAGATGGGCATAATACCAAGCTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
3UTR-3UTR TCA 90 bp TTTCCTTTCTTAGCAATAGCCTCTAAATTTGCAGGCCCACCCCAAACTGTTCCTCCCCACTCAACACTTTaGGAGCTTGTCTACTTCCGA +
Preference number: 2 (lower is better)
Translates to: FPFLAIASKFAGPPQTVPPHSTL*ELVYFR
Trigger: TCGGAAGTAGACAAGCTCTCAAAGTGTTGAGTGGGG...AGGAACAGTTTGGGGTGGGCCTGCAAATTTAGAGGCTATTGCTAAGAAAGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368295.8
ENST00000479525.6
ENST00000528402.5
3UTR-3UTR TCA 90 bp CGATTATTTCAACTAGCCGGGTGGTGCCACCCCAGCTTGGTATTATGCCCATCTAGATTTAGTTTCATCTaGAGACTGCAAGACCTCTTC +
Preference number: 2 (lower is better)
Translates to: RLFQLAGWCHPSLVLCPSRFSFI*RLQDLF
Trigger: GAAGAGGTCTTGCAGTCTTCAGATGAAACTAAATCT...AGATGGGCATAATACCAAGCTGGGGTGGCACCACCCGGCTAGTTGAAATAATCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
3UTR-3UTR GCA 90 bp CCCCAGCTTGGTATTATGCCCATCTCTTTGTGGACGAATCTGATCTTACTCTCTCCCAGCTTGGTATTATaGCCATCTCTTTGTGGACGA +
Preference number: 2 (lower is better)
Translates to: PQLGIMPISLWTNLILLSPSLVL*PSLCGR
Trigger: TCGTCCACAAAGAGATGGGCATAATACCAAGCTGGG...AGAGAGTAAGATCAGATTCGTCCACAAAGAGATGGGCATAATACCAAGCTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
3UTR-3UTR GCA 90 bp CCACTCAACACTTTGAGAGCTTGTCTACTTCCGATTATTTCAACTAGCCGGGTGCCCAGCTTGGTATTATaGCCATCTCTTTGTGGACGA +
Preference number: 2 (lower is better)
Translates to: PLNTLRACLLPIISTSRVPSLVL*PSLCGR
Trigger: TCGTCCACAAAGAGATGGGCATAATACCAAGCTGGG...CACCCGGCTAGTTGAAATAATCGGAAGTAGACAAGCTCTCAAAGTGTTGAGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
3UTR-3UTR GCA 90 bp TCTCTTTCGTTCTGTAATGCTTCCTCCAAATATAGCTCTCTGCCTGAACAAACACAACTAGCCGGGTGGTaGCACCCCAGCTTGGTATTA +
Preference number: 2 (lower is better)
Translates to: SLSFCNASSKYSSLPEQTQLAGW*HPSLVL
Trigger: TAATACCAAGCTGGGGTGGCACCACCCGGCTAGTTG...TGTTTGTTCAGGCAGAGAGCTATATTTGGAGGAAGCATTACAGAACGAAAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
3UTR-3UTR GCA 90 bp AACGCCAGGAATAGGTTTTGTATAGAAGCTCTCCTTTTAAACACTGCTCTTTGGCAACTAGCCGGGTGGTaGCACCCCAGCTTGGTATTA +
Preference number: 2 (lower is better)
Translates to: NARNRFCIEALLLNTALWQLAGW*HPSLVL
Trigger: TAATACCAAGCTGGGGTGGCACCACCCGGCTAGTTG...CCAAAGAGCAGTGTTTAAAAGGAGAGCTTCTATACAAAACCTATTCCTGGCGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368295.8
ENST00000528402.5
3UTR-3UTR CCA 90 bp TGCTTTAGCCATTCTTGTGCCTCTTCTAGAGATTTAGTTTCATCTGAAGACTGCTTTCAACTAGCCGGGTaGTGCCACCCCAGCTTGGTA +
Preference number: 2 (lower is better)
Translates to: CFSHSCASSRDLVSSEDCFQLAG*CHPSLV
Trigger: TACCAAGCTGGGGTGGCACCACCCGGCTAGTTGAAA...GCAGTCTTCAGATGAAACTAAATCTCTAGAAGAGGCACAAGAATGGCTAAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
3UTR-3UTR TCA 90 bp CCCCAGCTTGGTATTATGCCCATCTCTTTGTGGACGAATCTGATCTTACTCTCTCTTTGTGGACGAATCTaGTCTTACTCTCTGGAGTCA +
Preference number: 2 (lower is better)
Translates to: PQLGIMPISLWTNLILLSLCGRI*SYSLES
Trigger: TGACTCCAGAGAGTAAGATCAGATTCGTCCACAAAG...AGAGAGTAAGATCAGATTCGTCCACAAAGAGATGGGCATAATACCAAGCTGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
3UTR-3UTR GCA 90 bp TCCAGTTTAAGGGCCCCACTCAACACTTTGAGAGCTTGTCTACTTCCGATTATTCCCAGCTTGGTATTATaGCCATCTCTTTGTGGACGA +
Preference number: 2 (lower is better)
Translates to: SSLRAPLNTLRACLLPIIPSLVL*PSLCGR
Trigger: TCGTCCACAAAGAGATGGGCATAATACCAAGCTGGG...AATAATCGGAAGTAGACAAGCTCTCAAAGTGTTGAGTGGGGCCCTTAAACTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
3UTR-3UTR GCA 90 bp TTAGTTTCATCTGAAGACTGCAAGACCTCTTCAACCATTCCTATGTTTAGAGCACAACTAGCCGGGTGGTaGCACCCCAGCTTGGTATTA +
Preference number: 2 (lower is better)
Translates to: LVSSEDCKTSSTIPMFRAQLAGW*HPSLVL
Trigger: TAATACCAAGCTGGGGTGGCACCACCCGGCTAGTTG...TGCTCTAAACATAGGAATGGTTGAAGAGGTCTTGCAGTCTTCAGATGAAACTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
3UTR-3UTR CCA 90 bp AGCCATTCTTGTGCCTCTTCTAGAGATTTAGTTTCATCTGAAGACTGCAAGACCGGTGCCACCCCAGCTTaGTATTATGCCCATCTCTTT +
Preference number: 2 (lower is better)
Translates to: SHSCASSRDLVSSEDCKTGATPA*YYAHLF
Trigger: AAAGAGATGGGCATAATACCAAGCTGGGGTGGCACC...GGTCTTGCAGTCTTCAGATGAAACTAAATCTCTAGAAGAGGCACAAGAATGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
3UTR-3UTR TCA 90 bp AAAGATCTCTTTCGTTCTGTAATGCTTCCTCCAAATATAGCTCTCTGCCTGAACCCCCACTCAACACTTTaGGAGCTTGTCTACTTCCGA +
Preference number: 2 (lower is better)
Translates to: KDLFRSVMLPPNIALCLNPHSTL*ELVYFR
Trigger: TCGGAAGTAGACAAGCTCTCAAAGTGTTGAGTGGGG...GTTCAGGCAGAGAGCTATATTTGGAGGAAGCATTACAGAACGAAAGAGATCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
3UTR-3UTR GCA 90 bp CAAACTGTTCCTAAAAGATCTCTTTCGTTCTGTAATGCTTCCTCCAAATATAGCCAACTAGCCGGGTGGTaGCACCCCAGCTTGGTATTA +
Preference number: 2 (lower is better)
Translates to: QTVPKRSLSFCNASSKYSQLAGW*HPSLVL
Trigger: TAATACCAAGCTGGGGTGGCACCACCCGGCTAGTTG...GCTATATTTGGAGGAAGCATTACAGAACGAAAGAGATCTTTTAGGAACAGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368295.8
ENST00000479525.6
ENST00000528402.5
3UTR-3UTR CCA 90 bp AGCCATTCTTGTGCCTCTTCTAGAGATTTAGTTTCATCTGAAGACTGCAAGACCACTTCCGGTGGCCCTTaGATGAATTGCTTTAGCCAT +
Preference number: 2 (lower is better)
Translates to: SHSCASSRDLVSSEDCKTTSGGP*MNCFSH
Trigger: ATGGCTAAAGCAATTCATCCAAGGGCCACCGGAAGT...GGTCTTGCAGTCTTCAGATGAAACTAAATCTCTAGAAGAGGCACAAGAATGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
3UTR-3UTR TCA 90 bp AGCCATTCTTGTGCCTCTTCTAGAGATTTAGTTTCATCTGAAGACTGCAAGACCCTTTGTGGACGAATCTaGTCTTACTCTCTGGAGTCA +
Preference number: 2 (lower is better)
Translates to: SHSCASSRDLVSSEDCKTLCGRI*SYSLES
Trigger: TGACTCCAGAGAGTAAGATCAGATTCGTCCACAAAG...GGTCTTGCAGTCTTCAGATGAAACTAAATCTCTAGAAGAGGCACAAGAATGGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
3UTR-3UTR CCA 90 bp TTTGCAGGCCCACCCCAAACTGTTCCTAAAAGATCTCTTTCGTTCTGTAATGCTATGCCCATCTCTTTGTaGACGAATCTGATCTTACTC +
Preference number: 2 (lower is better)
Translates to: FAGPPQTVPKRSLSFCNAMPISL*TNLILL
Trigger: GAGTAAGATCAGATTCGTCCACAAAGAGATGGGCAT...AGCATTACAGAACGAAAGAGATCTTTTAGGAACAGTTTGGGGTGGGCCTGCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368295.8
ENST00000479525.6
ENST00000528402.5
3UTR-3UTR CCA 90 bp AGATCTCTTTCGTTCTGTAATGCTTCCTCCAAATATAGCTCTCTGCCTGAACAAACTTCCGGTGGCCCTTaGATGAATTGCTTTAGCCAT +
Preference number: 2 (lower is better)
Translates to: RSLSFCNASSKYSSLPEQTSGGP*MNCFSH
Trigger: ATGGCTAAAGCAATTCATCCAAGGGCCACCGGAAGT...TTGTTCAGGCAGAGAGCTATATTTGGAGGAAGCATTACAGAACGAAAGAGATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
3UTR-3UTR TCA 90 bp TCTCTTTCGTTCTGTAATGCTTCCTCCAAATATAGCTCTCTGCCTGAACAAACACTTTGTGGACGAATCTaGTCTTACTCTCTGGAGTCA +
Preference number: 2 (lower is better)
Translates to: SLSFCNASSKYSSLPEQTLCGRI*SYSLES
Trigger: TGACTCCAGAGAGTAAGATCAGATTCGTCCACAAAG...TGTTTGTTCAGGCAGAGAGCTATATTTGGAGGAAGCATTACAGAACGAAAGAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
3UTR-3UTR GCA 90 bp CCCCAAACTGTTCCTAAAAGATCTCTTTCGTTCTGTAATGCTTCCTCCAAATATGGCCCTTGGATGAATTaGTTTAGCCATTCTTGTGCC +
Preference number: 2 (lower is better)
Translates to: PQTVPKRSLSFCNASSKYGPWMN*FSHSCA
Trigger: GGCACAAGAATGGCTAAAGCAATTCATCCAAGGGCC...ATATTTGGAGGAAGCATTACAGAACGAAAGAGATCTTTTAGGAACAGTTTGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368295.8
ENST00000479525.6
ENST00000528402.5
3UTR-3UTR GCA 90 bp CTGTTCCTAAAAGATCTCTTTCGTTCTGTAATGCTTCCTCCAAATATAGCTCTCGGCCCTTGGATGAATTaGTTTAGCCATTCTTGTGCC +
Preference number: 2 (lower is better)
Translates to: LFLKDLFRSVMLPPNIALGPWMN*FSHSCA
Trigger: GGCACAAGAATGGCTAAAGCAATTCATCCAAGGGCC...GAGAGCTATATTTGGAGGAAGCATTACAGAACGAAAGAGATCTTTTAGGAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368295.8
ENST00000479525.6
ENST00000528402.5
3UTR-3UTR GCA 90 bp TTAGTTTCATCTGAAGACTGCAAGACCTCTTCAACCATTCCTATGTTTAGAGCATGCTGTAGTAAATTCTaGTCCTCCACCCAATGCCCA +
Preference number: 2 (lower is better)
Translates to: LVSSEDCKTSSTIPMFRACCSKF*SSTQCP
Trigger: TGGGCATTGGGTGGAGGAGCAGAATTTACTACAGCA...TGCTCTAAACATAGGAATGGTTGAAGAGGTCTTGCAGTCTTCAGATGAAACTAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
3UTR-3UTR CCA 90 bp CTAAATGTTCCAGATTACGCAGTAAATACCCAAGTGAGTAATTGGCAAGAAATGGGTGCCACCCCAGCTTaGTATTATGCCCATCTCTTT +
Preference number: 2 (lower is better)
Translates to: LNVPDYAVNTQVSNWQEMGATPA*YYAHLF
Trigger: AAAGAGATGGGCATAATACCAAGCTGGGGTGGCACC...CATTTCTTGCCAATTACTCACTTGGGTATTTACTGCGTAATCTGGAACATTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368291.6
ENST00000368295.8
ENST00000479525.6
ENST00000528402.5
3UTR-3UTR CCA 90 bp TTTCATCTGAAGACTGCAAGACCTCTTCAACCATTCCTATGTTTAGAGCATTTTGGTGCCACCCCAGCTTaGTATTATGCCCATCTCTTT +
Preference number: 2 (lower is better)
Translates to: FHLKTARPLQPFLCLEHFGATPA*YYAHLF
Trigger: AAAGAGATGGGCATAATACCAAGCTGGGGTGGCACC...AAAATGCTCTAAACATAGGAATGGTTGAAGAGGTCTTGCAGTCTTCAGATGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
3UTR-3UTR TCA 90 bp AGCCATTCTTGTGCCTCTTCTAGAGATTTAGTTTCATCTGAAGACTGCAAGACCAGATTTAGTTTCATCTaGAGACTGCAAGACCTCTTC +
Preference number: 2 (lower is better)
Translates to: SHSCASSRDLVSSEDCKTRFSFI*RLQDLF
Trigger: GAAGAGGTCTTGCAGTCTTCAGATGAAACTAAATCT...GGTCTTGCAGTCTTCAGATGAAACTAAATCTCTAGAAGAGGCACAAGAATGGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
3UTR-3UTR GCA 90 bp ACTGTTCCTAAAAGATCTCTTTCGTTCTGTAATGCTTCCTCCAAATATAGCTCTGGCCCTTGGATGAATTaGTTTAGCCATTCTTGTGCC +
Preference number: 2 (lower is better)
Translates to: TVPKRSLSFCNASSKYSSGPWMN*FSHSCA
Trigger: GGCACAAGAATGGCTAAAGCAATTCATCCAAGGGCC...AGAGCTATATTTGGAGGAAGCATTACAGAACGAAAGAGATCTTTTAGGAACAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368295.8
ENST00000479525.6
ENST00000528402.5
3UTR-3UTR GCA 90 bp TTTCATCTGAAGACTGCAAGACCTCTTCAACCATTCCTATGTTTAGAGCATTTTGGCCCTTGGATGAATTaGTTTAGCCATTCTTGTGCC +
Preference number: 2 (lower is better)
Translates to: FHLKTARPLQPFLCLEHFGPWMN*FSHSCA
Trigger: GGCACAAGAATGGCTAAAGCAATTCATCCAAGGGCC...AAAATGCTCTAAACATAGGAATGGTTGAAGAGGTCTTGCAGTCTTCAGATGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
3UTR-3UTR GCA 90 bp CCCAAACTGTTCCTAAAAGATCTCTTTCGTTCTGTAATGCTTCCTCCAAATATATGCTGTAGTAAATTCTaGTCCTCCACCCAATGCCCA +
Preference number: 2 (lower is better)
Translates to: PKLFLKDLFRSVMLPPNICCSKF*SSTQCP
Trigger: TGGGCATTGGGTGGAGGAGCAGAATTTACTACAGCA...TATATTTGGAGGAAGCATTACAGAACGAAAGAGATCTTTTAGGAACAGTTTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368295.8
ENST00000479525.6
3UTR-3UTR CCA 90 bp AGATCTCTTTCGTTCTGTAATGCTTCCTCCAAATATAGCTCTCTGCCTGAACAAATGCCCATCTCTTTGTaGACGAATCTGATCTTACTC +
Preference number: 2 (lower is better)
Translates to: RSLSFCNASSKYSSLPEQMPISL*TNLILL
Trigger: GAGTAAGATCAGATTCGTCCACAAAGAGATGGGCAT...TTGTTCAGGCAGAGAGCTATATTTGGAGGAAGCATTACAGAACGAAAGAGATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
3UTR-3UTR CCA 90 bp TCTCTTTCGTTCTGTAATGCTTCCTCCAAATATAGCTCTCTGCCTGAACAAACAATGCCCATCTCTTTGTaGACGAATCTGATCTTACTC +
Preference number: 2 (lower is better)
Translates to: SLSFCNASSKYSSLPEQTMPISL*TNLILL
Trigger: GAGTAAGATCAGATTCGTCCACAAAGAGATGGGCAT...TGTTTGTTCAGGCAGAGAGCTATATTTGGAGGAAGCATTACAGAACGAAAGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
3UTR-3UTR CCA 90 bp ATGAATTGCTTTAGCCATTCTTGTGCCTCTTCTAGAGATTTAGTTTCATCTGAAGGTGCCACCCCAGCTTaGTATTATGCCCATCTCTTT +
Preference number: 2 (lower is better)
Translates to: MNCFSHSCASSRDLVSSEGATPA*YYAHLF
Trigger: AAAGAGATGGGCATAATACCAAGCTGGGGTGGCACC...TTCAGATGAAACTAAATCTCTAGAAGAGGCACAAGAATGGCTAAAGCAATTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
3UTR-3UTR CCA 90 bp GCAGGATGCTTCATGAGTCCCTTCAAGTGGTTTAAAACTACATCAACAGTAGTTCACTGGAGCTTTACTTaGAGTACATCCACACGAAAA +
Preference number: 2 (lower is better)
Translates to: AGCFMSPFKWFKTTSTVVHWSFT*STSTRK
Trigger: TTTTCGTGTGGATGTACTCCAAGTAAAGCTCCAGTG...AACTACTGTTGATGTAGTTTTAAACCACTTGAAGGGACTCATGAAGCATCCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368295.8
ENST00000454859.8
ENST00000474289.6
ENST00000531967.5
3UTR-3UTR TCA 90 bp CATATTAGTCACTGGAGCTTTACTTGGAGTACATCCACACGAAAAACCAATTATCTTTGTGGACGAATCTaGTCTTACTCTCTGGAGTCA +
Preference number: 2 (lower is better)
Translates to: HISHWSFTWSTSTRKTNYLCGRI*SYSLES
Trigger: TGACTCCAGAGAGTAAGATCAGATTCGTCCACAAAG...ATAATTGGTTTTTCGTGTGGATGTACTCCAAGTAAAGCTCCAGTGACTAATATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000368291.6
ENST00000368295.8
ENST00000479525.6
ENST00000528402.5
3UTR-3UTR TCA 90 bp AGATCTCTTTCGTTCTGTAATGCTTCCTCCAAATATAGCTCTCTGCCTGAACAAAGATTTAGTTTCATCTaGAGACTGCAAGACCTCTTC +
Preference number: 2 (lower is better)
Translates to: RSLSFCNASSKYSSLPEQRFSFI*RLQDLF
Trigger: GAAGAGGTCTTGCAGTCTTCAGATGAAACTAAATCT...TTGTTCAGGCAGAGAGCTATATTTGGAGGAAGCATTACAGAACGAAAGAGATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
3UTR-3UTR GCA 90 bp CCTTTCTTAGCAATAGCCTCTAAATTTGCAGGCCCACCCCAAACTGTTCCTAAACCAAATATAGCTCTCTaGCTGAACAAACAGATTTTT +
Preference number: 2 (lower is better)
Translates to: PFLAIASKFAGPPQTVPKPNIAL*LNKQIF
Trigger: AAAAATCTGTTTGTTCAGGCAGAGAGCTATATTTGG...TTTAGGAACAGTTTGGGGTGGGCCTGCAAATTTAGAGGCTATTGCTAAGAAAGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368295.8
ENST00000479525.6
ENST00000528402.5
3UTR-3UTR TCA 90 bp CGTTCTGTAATGCTTCCTCCAAATATAGCTCTCTGCCTGAACAAACAGATTTTTAGATTTAGTTTCATCTaGAGACTGCAAGACCTCTTC +
Preference number: 2 (lower is better)
Translates to: RSVMLPPNIALCLNKQIFRFSFI*RLQDLF
Trigger: GAAGAGGTCTTGCAGTCTTCAGATGAAACTAAATCT...AAAAATCTGTTTGTTCAGGCAGAGAGCTATATTTGGAGGAAGCATTACAGAACG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
3UTR-3UTR GCA 90 bp TGCTTTAGCCATTCTTGTGCCTCTTCTAGAGATTTAGTTTCATCTGAAGACTGCGCTTCTTTACCTAGGTaGAAAGTCAATTCATATTCC +
Preference number: 2 (lower is better)
Translates to: CFSHSCASSRDLVSSEDCASLPR*KVNSYS
Trigger: GGAATATGAATTGACTTTGCACCTAGGTAAAGAAGC...GCAGTCTTCAGATGAAACTAAATCTCTAGAAGAGGCACAAGAATGGCTAAAGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000417628.6
3UTR-3UTR TCA 90 bp CAAACTGTTCCTAAAAGATCTCTTTCGTTCTGTAATGCTTCCTCCAAATATAGCAGATTTAGTTTCATCTaGAGACTGCAAGACCTCTTC +
Preference number: 2 (lower is better)
Translates to: QTVPKRSLSFCNASSKYSRFSFI*RLQDLF
Trigger: GAAGAGGTCTTGCAGTCTTCAGATGAAACTAAATCT...GCTATATTTGGAGGAAGCATTACAGAACGAAAGAGATCTTTTAGGAACAGTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368295.8
ENST00000479525.6
ENST00000528402.5
3UTR-3UTR CAA 90 bp CTAGCCGGGTGGTGCCACCCCAGCTTGGTATTATGCCCATCTCTTTGTGGACGATGGTGCCACCCCAGCTaGGTATTATGCCCATCTCTT +
Preference number: 3 (lower is better)
Translates to: LAGWCHPSLVLCPSLCGRWCHPS*VLCPSL
Trigger: AAGAGATGGGCATAATACCAAGCTGGGGTGGCACCA...TCGTCCACAAAGAGATGGGCATAATACCAAGCTGGGGTGGCACCACCCGGCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
3UTR-3UTR CAA 90 bp AGCCGGGTGGTGCCACCCCAGCTTGGTATTATGCCCATCTCTTTGTGGACGAATGCCCCACTCAACACTTaGAGAGCTTGTCTACTTCCG +
Preference number: 3 (lower is better)
Translates to: SRVVPPQLGIMPISLWTNAPLNT*RACLLP
Trigger: CGGAAGTAGACAAGCTCTCAAAGTGTTGAGTGGGGC...ATTCGTCCACAAAGAGATGGGCATAATACCAAGCTGGGGTGGCACCACCCGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
3UTR-3UTR CAA 90 bp TCAACTAGCCGGGTGGTGCCACCCCAGCTTGGTATTATGCCCATCTCTTTGTGGACCCAATGCCCAACCTaGAACCAGCGCAACACTTAT +
Preference number: 3 (lower is better)
Translates to: STSRVVPPQLGIMPISLWTQCPT*NQRNTY
Trigger: ATAAGTGTTGCGCTGGTTCAAGGTTGGGCATTGGGT...CCACAAAGAGATGGGCATAATACCAAGCTGGGGTGGCACCACCCGGCTAGTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368292.10
ENST00000417628.6
3UTR CCA 72 bp GAGCTTGTCTACTTCCGATTATTTCAACTAGCCGGGTaGTGCCACCCCAGCTTGGTATTATGCCCATCTCTT +
Preference number: 3 (lower is better)
Translates to: ELVYFRLFQLAG*CHPSLVLCPSL
Trigger: AAGAGATGGGCATAATACCAAGCTGGGGTGGCACCACCCGGCTAGTTGAAATAATCGGAAGTAGACAAGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
3UTR-3UTR CAA 90 bp CCAGCTTGGTATTATGCCCATCTCTTTGTGGACGAATCTGATCTTACTCTCTGGTGGTGCCACCCCAGCTaGGTATTATGCCCATCTCTT +
Preference number: 3 (lower is better)
Translates to: PAWYYAHLFVDESDLTLWWCHPS*VLCPSL
Trigger: AAGAGATGGGCATAATACCAAGCTGGGGTGGCACCA...CCAGAGAGTAAGATCAGATTCGTCCACAAAGAGATGGGCATAATACCAAGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
3UTR GCA 72 bp CTTGTCTACTTCCGATTATTTCAACTAGCCGGGTGGTaGCACCCCAGCTTGGTATTATGCCCATCTCTTTGT +
Preference number: 3 (lower is better)
Translates to: LVYFRLFQLAGW*HPSLVLCPSLC
Trigger: ACAAAGAGATGGGCATAATACCAAGCTGGGGTGGCACCACCCGGCTAGTTGAAATAATCGGAAGTAGACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
3UTR-3UTR CAA 90 bp CCTTTCTTAGCAATAGCCTCTAAATTTGCAGGCCCACCCCAAACTGTTCCTAAAGCCCCACTCAACACTTaGAGAGCTTGTCTACTTCCG +
Preference number: 3 (lower is better)
Translates to: PFLAIASKFAGPPQTVPKAPLNT*RACLLP
Trigger: CGGAAGTAGACAAGCTCTCAAAGTGTTGAGTGGGGC...TTTAGGAACAGTTTGGGGTGGGCCTGCAAATTTAGAGGCTATTGCTAAGAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368295.8
ENST00000479525.6
ENST00000528402.5
3UTR-3UTR CAA 90 bp TTGAGAGCTTGTCTACTTCCGATTATTTCAACTAGCCGGGTGGTGCCACCCCAGATTATGCCCATCTCTTaGTGGACGAATCTGATCTTA +
Preference number: 3 (lower is better)
Translates to: LRACLLPIISTSRVVPPQIMPIS*WTNLIL
Trigger: TAAGATCAGATTCGTCCACAAAGAGATGGGCATAAT...CTGGGGTGGCACCACCCGGCTAGTTGAAATAATCGGAAGTAGACAAGCTCTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
3UTR-3UTR CAA 90 bp AGTTTAAGGGCCCCACTCAACACTTTGAGAGCTTGTCTACTTCCGATTATTTCAGCCCCACTCAACACTTaGAGAGCTTGTCTACTTCCG +
Preference number: 3 (lower is better)
Translates to: SLRAPLNTLRACLLPIISAPLNT*RACLLP
Trigger: CGGAAGTAGACAAGCTCTCAAAGTGTTGAGTGGGGC...TGAAATAATCGGAAGTAGACAAGCTCTCAAAGTGTTGAGTGGGGCCCTTAAACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
3UTR-3UTR CAA 90 bp TGTCTACTTCCGATTATTTCAACTAGCCGGGTGGTGCCACCCCAGCTTGGTATTATTATGCCCATCTCTTaGTGGACGAATCTGATCTTA +
Preference number: 3 (lower is better)
Translates to: CLLPIISTSRVVPPQLGIIMPIS*WTNLIL
Trigger: TAAGATCAGATTCGTCCACAAAGAGATGGGCATAAT...AATACCAAGCTGGGGTGGCACCACCCGGCTAGTTGAAATAATCGGAAGTAGACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
3UTR-3UTR CAA 90 bp GGTATTATGCCCATCTCTTTGTGGACGAATCTGATCTTACTCTCTGGAGTCATTACCCAATGCCCAACCTaGAACCAGCGCAACACTTAT +
Preference number: 3 (lower is better)
Translates to: GIMPISLWTNLILLSGVITQCPT*NQRNTY
Trigger: ATAAGTGTTGCGCTGGTTCAAGGTTGGGCATTGGGT...AATGACTCCAGAGAGTAAGATCAGATTCGTCCACAAAGAGATGGGCATAATACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368292.10
ENST00000417628.6
3UTR-3UTR CAA 90 bp CTGTTCCTAAAAGATCTCTTTCGTTCTGTAATGCTTCCTCCAAATATAGCTCTCGCCCCACTCAACACTTaGAGAGCTTGTCTACTTCCG +
Preference number: 3 (lower is better)
Translates to: LFLKDLFRSVMLPPNIALAPLNT*RACLLP
Trigger: CGGAAGTAGACAAGCTCTCAAAGTGTTGAGTGGGGC...GAGAGCTATATTTGGAGGAAGCATTACAGAACGAAAGAGATCTTTTAGGAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368295.8
ENST00000479525.6
ENST00000528402.5
3UTR TCA 72 bp GTAGTAAATTCTGCTCCTCCACCCAATGCCCAACCTTaGACCAGCGCAACACTTATTAAAGGAAGTCTTGAT +
Preference number: 3 (lower is better)
Translates to: VVNSAPPPNAQP*TSATLIKGSLD
Trigger: ATCAAGACTTCCTTTAATAAGTGTTGCGCTGGTTCAAGGTTGGGCATTGGGTGGAGGAGCAGAATTTACTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368292.10
ENST00000417628.6
3UTR-3UTR CAA 90 bp CTAAATGTTCCAGATTACGCAGTAAATACCCAAGTGAGTAATTGGCAAGAAATGTGGTGCCACCCCAGCTaGGTATTATGCCCATCTCTT +
Preference number: 3 (lower is better)
Translates to: LNVPDYAVNTQVSNWQEMWCHPS*VLCPSL
Trigger: AAGAGATGGGCATAATACCAAGCTGGGGTGGCACCA...CATTTCTTGCCAATTACTCACTTGGGTATTTACTGCGTAATCTGGAACATTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368291.6
ENST00000368295.8
ENST00000479525.6
ENST00000528402.5
3UTR-3UTR CAA 90 bp TCCAGTTTAAGGGCCCCACTCAACACTTTGAGAGCTTGTCTACTTCCGATTATTATTATGCCCATCTCTTaGTGGACGAATCTGATCTTA +
Preference number: 3 (lower is better)
Translates to: SSLRAPLNTLRACLLPIIIMPIS*WTNLIL
Trigger: TAAGATCAGATTCGTCCACAAAGAGATGGGCATAAT...AATAATCGGAAGTAGACAAGCTCTCAAAGTGTTGAGTGGGGCCCTTAAACTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
3UTR-3UTR CAA 90 bp ATGAATTGCTTTAGCCATTCTTGTGCCTCTTCTAGAGATTTAGTTTCATCTGAATGGTGCCACCCCAGCTaGGTATTATGCCCATCTCTT +
Preference number: 3 (lower is better)
Translates to: MNCFSHSCASSRDLVSSEWCHPS*VLCPSL
Trigger: AAGAGATGGGCATAATACCAAGCTGGGGTGGCACCA...TTCAGATGAAACTAAATCTCTAGAAGAGGCACAAGAATGGCTAAAGCAATTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
3UTR-3UTR CAA 90 bp ACATTTATACATATTAGTCACTGGAGCTTTACTTGGAGTACATCCACACGAAAATGGTGCCACCCCAGCTaGGTATTATGCCCATCTCTT +
Preference number: 3 (lower is better)
Translates to: TFIHISHWSFTWSTSTRKWCHPS*VLCPSL
Trigger: AAGAGATGGGCATAATACCAAGCTGGGGTGGCACCA...TTTTCGTGTGGATGTACTCCAAGTAAAGCTCCAGTGACTAATATGTATAAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368291.6
ENST00000368295.8
ENST00000479525.6
ENST00000528402.5
3UTR-3UTR CAA 90 bp GCAGGATGCTTCATGAGTCCCTTCAAGTGGTTTAAAACTACATCAACAGTAGTTTCACTGGAGCTTTACTaGGAGTACATCCACACGAAA +
Preference number: 3 (lower is better)
Translates to: AGCFMSPFKWFKTTSTVVSLELY*EYIHTK
Trigger: TTTCGTGTGGATGTACTCCAAGTAAAGCTCCAGTGA...AACTACTGTTGATGTAGTTTTAAACCACTTGAAGGGACTCATGAAGCATCCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368295.8
ENST00000454859.8
ENST00000474289.6
ENST00000531967.5
3UTR GCA 72 bp AAAGCTCTAATTACTTCCGGTGGCCCTTGGATGAATTaGTTTAGCCATTCTTGTGCCTCTTCTAGAGATTTA +
Preference number: 3 (lower is better)
Translates to: KALITSGGPWMN*FSHSCASSRDL
Trigger: TAAATCTCTAGAAGAGGCACAAGAATGGCTAAAGCAATTCATCCAAGGGCCACCGGAAGTAATTAGAGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
3UTR-3UTR CAA 90 bp AGTTTAAGGGCCCCACTCAACACTTTGAGAGCTTGTCTACTTCCGATTATTTCAATTATGCCCATCTCTTaGTGGACGAATCTGATCTTA +
Preference number: 3 (lower is better)
Translates to: SLRAPLNTLRACLLPIISIMPIS*WTNLIL
Trigger: TAAGATCAGATTCGTCCACAAAGAGATGGGCATAAT...TGAAATAATCGGAAGTAGACAAGCTCTCAAAGTGTTGAGTGGGGCCCTTAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
3UTR-3UTR CAA 90 bp TTTTTCAAAGCTCTAATTACTTCCGGTGGCCCTTGGATGAATTGCTTTAGCCATATTATGCCCATCTCTTaGTGGACGAATCTGATCTTA +
Preference number: 3 (lower is better)
Translates to: FFKALITSGGPWMNCFSHIMPIS*WTNLIL
Trigger: TAAGATCAGATTCGTCCACAAAGAGATGGGCATAAT...ATGGCTAAAGCAATTCATCCAAGGGCCACCGGAAGTAATTAGAGCTTTGAAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
3UTR GCA 72 bp ATTAAAGGAAGTCTCATAAATCTTGTTAAGGTGTTTTaGATGAACATGCATACGGCCATTCCATCCTCTGGA +
Preference number: 3 (lower is better)
Translates to: IKGSLINLVKVF*MNMHTAIPSSG
Trigger: TCCAGAGGATGGAATGGCCGTATGCATGTTCATGCAAAACACCTTAACAAGATTTATGAGACTTCCTTTAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526299.5
CDS-3UTR TCA 90 bp CCGATTATTTCAACTAGCCGGGTGGTGCCACCCCAGCTTGGTATTATGCCCATCCCCTGCCGGTTCCCGTaGCCCCGGAAATCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: PIISTSRVVPPQLGIMPIPCRFP*PRKSRS
Trigger: GGAGCGGGATTTCCGGGGTCACGGGAACCGGCAGGG...GATGGGCATAATACCAAGCTGGGGTGGCACCACCCGGCTAGTTGAAATAATCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368291.6
ENST00000479525.6
CDS-3UTR GCA 90 bp CCGATTATTTCAACTAGCCGGGTGGTGCCACCCCAGCTTGGTATTATGCCCATCCGGAAATCCCGCTCCTaGCGCGAGGCGCCCTCCGCT +
Preference number: 4 (lower is better)
Translates to: PIISTSRVVPPQLGIMPIRKSRS*REAPSA
Trigger: AGCGGAGGGCGCCTCGCGGCAGGAGCGGGATTTCCG...GATGGGCATAATACCAAGCTGGGGTGGCACCACCCGGCTAGTTGAAATAATCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368291.6
ENST00000479525.6
CDS-3UTR TCA 90 bp CCGATTATTTCAACTAGCCGGGTGGTGCCACCCCAGCTTGGTATTATGCCCATCTTGCCCCACGGACAATaGGGCCTTTCCCCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: PIISTSRVVPPQLGIMPILPHGQ*GLSPLS
Trigger: GGACAGAGGGGAAAGGCCTCATTGTCCGTGGGGCAA...GATGGGCATAATACCAAGCTGGGGTGGCACCACCCGGCTAGTTGAAATAATCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR TCA 90 bp TTCCGATTATTTCAACTAGCCGGGTGGTGCCACCCCAGCTTGGTATTATGCCCATTGCCCCACGGACAATaGGGCCTTTCCCCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: FRLFQLAGWCHPSLVLCPLPHGQ*GLSPLS
Trigger: GGACAGAGGGGAAAGGCCTCATTGTCCGTGGGGCAA...TGGGCATAATACCAAGCTGGGGTGGCACCACCCGGCTAGTTGAAATAATCGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR TCA 90 bp ATTTCAACTAGCCGGGTGGTGCCACCCCAGCTTGGTATTATGCCCATCTCTTTGTTGCCCCACGGACAATaGGGCCTTTCCCCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: ISTSRVVPPQLGIMPISLLPHGQ*GLSPLS
Trigger: GGACAGAGGGGAAAGGCCTCATTGTCCGTGGGGCAA...CAAAGAGATGGGCATAATACCAAGCTGGGGTGGCACCACCCGGCTAGTTGAAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR GCA 90 bp TTTCCTTTCTTAGCAATAGCCTCTAAATTTGCAGGCCCACCCCAAACTGTTCCTCCCCCGGGACCATCGTaGGCCCCTGTCCTCCGTTCT +
Preference number: 4 (lower is better)
Translates to: FPFLAIASKFAGPPQTVPPPGPS*APVLRS
Trigger: AGAACGGAGGACAGGGGCGCACGATGGTCCCGGGGG...AGGAACAGTTTGGGGTGGGCCTGCAAATTTAGAGGCTATTGCTAAGAAAGGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000368291.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR GCA 90 bp AGCCGGGTGGTGCCACCCCAGCTTGGTATTATGCCCATCTCTTTGTGGACGAATCTTTTCCGTTTTGCGTaGCTTTGTTTCCGCTCCCCC +
Preference number: 4 (lower is better)
Translates to: SRVVPPQLGIMPISLWTNLFRFA*LCFRSP
Trigger: GGGGGAGCGGAAACAAAGGCACGCAAAACGGAAAAG...ATTCGTCCACAAAGAGATGGGCATAATACCAAGCTGGGGTGGCACCACCCGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000368291.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR GCA 90 bp GAGCTTGTCTACTTCCGATTATTTCAACTAGCCGGGTGGTGCCACCCCAGCTTGCAACTAGCCGGGTGGTaGCACCCCAGCTTGGTATTA +
Preference number: 4 (lower is better)
Translates to: ELVYFRLFQLAGWCHPSLQLAGW*HPSLVL
Trigger: TAATACCAAGCTGGGGTGGCACCACCCGGCTAGTTG...CAAGCTGGGGTGGCACCACCCGGCTAGTTGAAATAATCGGAAGTAGACAAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR TCA 90 bp CCAGGTTCAAGCAATCCTTCCACCTCAGACTCCCAAGTTGTAGGACTACAGGCAACTCCTGACCTCAGGTaGTCTGCCTATTTCAGCCCC +
Preference number: 4 (lower is better)
Translates to: PGSSNPSTSDSQVVGLQATPDLR*SAYFSP
Trigger: GGGGCTGAAATAGGCAGATCACCTGAGGTCAGGAGT...TGCCTGTAGTCCTACAACTTGGGAGTCTGAGGTGGAAGGATTGCTTGAACCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461239.2
CDS-3UTR GCA 90 bp TTTTTCAAAGCTCTAATTACTTCCGGTGGCCCTTGGATGAATTGCTTTAGCCATCGGAAATCCCGCTCCTaGCGCGAGGCGCCCTCCGCT +
Preference number: 4 (lower is better)
Translates to: FFKALITSGGPWMNCFSHRKSRS*REAPSA
Trigger: AGCGGAGGGCGCCTCGCGGCAGGAGCGGGATTTCCG...ATGGCTAAAGCAATTCATCCAAGGGCCACCGGAAGTAATTAGAGCTTTGAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368291.6
ENST00000479525.6
CDS-3UTR GCA 90 bp TTCCGATTATTTCAACTAGCCGGGTGGTGCCACCCCAGCTTGGTATTATGCCCACAACTAGCCGGGTGGTaGCACCCCAGCTTGGTATTA +
Preference number: 4 (lower is better)
Translates to: FRLFQLAGWCHPSLVLCPQLAGW*HPSLVL
Trigger: TAATACCAAGCTGGGGTGGCACCACCCGGCTAGTTG...TGGGCATAATACCAAGCTGGGGTGGCACCACCCGGCTAGTTGAAATAATCGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR GCA 90 bp CGATTATTTCAACTAGCCGGGTGGTGCCACCCCAGCTTGGTATTATGCCCATCTCAACTAGCCGGGTGGTaGCACCCCAGCTTGGTATTA +
Preference number: 4 (lower is better)
Translates to: RLFQLAGWCHPSLVLCPSQLAGW*HPSLVL
Trigger: TAATACCAAGCTGGGGTGGCACCACCCGGCTAGTTG...AGATGGGCATAATACCAAGCTGGGGTGGCACCACCCGGCTAGTTGAAATAATCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR CCA 90 bp TTGAGAGCTTGTCTACTTCCGATTATTTCAACTAGCCGGGTGGTGCCACCCCAGTTTCAACTAGCCGGGTaGTGCCACCCCAGCTTGGTA +
Preference number: 4 (lower is better)
Translates to: LRACLLPIISTSRVVPPQFQLAG*CHPSLV
Trigger: TACCAAGCTGGGGTGGCACCACCCGGCTAGTTGAAA...CTGGGGTGGCACCACCCGGCTAGTTGAAATAATCGGAAGTAGACAAGCTCTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR TCA 90 bp AGTTTAAGGGCCCCACTCAACACTTTGAGAGCTTGTCTACTTCCGATTATTTCACGCAGGCCACGGTGGTaGCTTCCTTTTCCGCTCCCC +
Preference number: 4 (lower is better)
Translates to: SLRAPLNTLRACLLPIISRRPRW*LPFPLP
Trigger: GGGGAGCGGAAAAGGAAGTCACCACCGTGGCCTGCG...TGAAATAATCGGAAGTAGACAAGCTCTCAAAGTGTTGAGTGGGGCCCTTAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368291.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR TCA 90 bp CTCAACACTTTGAGAGCTTGTCTACTTCCGATTATTTCAACTAGCCGGGTGGTGTTGCCCCACGGACAATaGGGCCTTTCCCCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: LNTLRACLLPIISTSRVVLPHGQ*GLSPLS
Trigger: GGACAGAGGGGAAAGGCCTCATTGTCCGTGGGGCAA...CACCACCCGGCTAGTTGAAATAATCGGAAGTAGACAAGCTCTCAAAGTGTTGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR GCA 90 bp CGATTATTTCAACTAGCCGGGTGGTGCCACCCCAGCTTGGTATTATGCCCATCTCTTTTCCGTTTTGCGTaGCTTTGTTTCCGCTCCCCC +
Preference number: 4 (lower is better)
Translates to: RLFQLAGWCHPSLVLCPSLFRFA*LCFRSP
Trigger: GGGGGAGCGGAAACAAAGGCACGCAAAACGGAAAAG...AGATGGGCATAATACCAAGCTGGGGTGGCACCACCCGGCTAGTTGAAATAATCG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000368291.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR GCA 90 bp TTGAGAGCTTGTCTACTTCCGATTATTTCAACTAGCCGGGTGGTGCCACCCCAGCTTTTCCGTTTTGCGTaGCTTTGTTTCCGCTCCCCC +
Preference number: 4 (lower is better)
Translates to: LRACLLPIISTSRVVPPQLFRFA*LCFRSP
Trigger: GGGGGAGCGGAAACAAAGGCACGCAAAACGGAAAAG...CTGGGGTGGCACCACCCGGCTAGTTGAAATAATCGGAAGTAGACAAGCTCTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000368291.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR GCA 90 bp GCCAGGAATAGGTTTTGTATAGAAGCTCTCCTTTTAAACACTGCTCTTTGGTTAGGCCTGCGCGGCGCTTaGAAGGGACAAGCCGCGGAG +
Preference number: 4 (lower is better)
Translates to: ARNRFCIEALLLNTALWLGLRGA*KGQAAE
Trigger: CTCCGCGGCTTGTCCCTTGCAAGCGCCGCGCAGGCC...TAACCAAAGAGCAGTGTTTAAAAGGAGAGCTTCTATACAAAACCTATTCCTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474289.6
CDS-3UTR GCA 90 bp CTAAATGTTCCAGATTACGCAGTAAATACCCAAGTGAGTAATTGGCAAGAAATGAGCGCGGGGCAGGCCTaGGCGGCGCTTGCAAGGGAC +
Preference number: 4 (lower is better)
Translates to: LNVPDYAVNTQVSNWQEMSAGQA*AALARD
Trigger: GTCCCTTGCAAGCGCCGCGCAGGCCTGCCCCGCGCT...CATTTCTTGCCAATTACTCACTTGGGTATTTACTGCGTAATCTGGAACATTTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474289.6
CDS-3UTR CCA 90 bp GCTTGTCTACTTCCGATTATTTCAACTAGCCGGGTGGTGCCACCCCAGCTTGGTGGTGCCACCCCAGCTTaGTATTATGCCCATCTCTTT +
Preference number: 4 (lower is better)
Translates to: ACLLPIISTSRVVPPQLGGATPA*YYAHLF
Trigger: AAAGAGATGGGCATAATACCAAGCTGGGGTGGCACC...ACCAAGCTGGGGTGGCACCACCCGGCTAGTTGAAATAATCGGAAGTAGACAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR TCA 90 bp CATATTAGTCACTGGAGCTTTACTTGGAGTACATCCACACGAAAAACCAATTATCCCTGCCGGTTCCCGTaGCCCCGGAAATCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: HISHWSFTWSTSTRKTNYPCRFP*PRKSRS
Trigger: GGAGCGGGATTTCCGGGGTCACGGGAACCGGCAGGG...ATAATTGGTTTTTCGTGTGGATGTACTCCAAGTAAAGCTCCAGTGACTAATATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368291.6
ENST00000479525.6
CDS-3UTR TCA 90 bp TTATACATATTAGTCACTGGAGCTTTACTTGGAGTACATCCACACGAAAAACCACCCTGCCGGTTCCCGTaGCCCCGGAAATCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: LYILVTGALLGVHPHEKPPCRFP*PRKSRS
Trigger: GGAGCGGGATTTCCGGGGTCACGGGAACCGGCAGGG...TGGTTTTTCGTGTGGATGTACTCCAAGTAAAGCTCCAGTGACTAATATGTATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000368291.6
ENST00000454859.8
ENST00000479525.6
CDS-3UTR TCA 90 bp AACGCCAGGAATAGGTTTTGTATAGAAGCTCTCCTTTTAAACACTGCTCTTTGGCGCAGGCCACGGTGGTaGCTTCCTTTTCCGCTCCCC +
Preference number: 4 (lower is better)
Translates to: NARNRFCIEALLLNTALWRRPRW*LPFPLP
Trigger: GGGGAGCGGAAAAGGAAGTCACCACCGTGGCCTGCG...CCAAAGAGCAGTGTTTAAAAGGAGAGCTTCTATACAAAACCTATTCCTGGCGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000454591.6
ENST00000454859.8
ENST00000528402.5
CDS-3UTR TCA 90 bp CGATTATTTCAACTAGCCGGGTGGTGCCACCCCAGCTTGGTATTATGCCCATCTCCCAATGCCCAACCTTaGACCAGCGCAACACTTATT +
Preference number: 4 (lower is better)
Translates to: RLFQLAGWCHPSLVLCPSPNAQP*TSATLI
Trigger: AATAAGTGTTGCGCTGGTTCAAGGTTGGGCATTGGG...AGATGGGCATAATACCAAGCTGGGGTGGCACCACCCGGCTAGTTGAAATAATCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR TCA 90 bp CAACTAGCCGGGTGGTGCCACCCCAGCTTGGTATTATGCCCATCTCTTTGTGGACTTTGTGGACGAATCTaGTCTTACTCTCTGGAGTCA +
Preference number: 4 (lower is better)
Translates to: QLAGWCHPSLVLCPSLCGLCGRI*SYSLES
Trigger: TGACTCCAGAGAGTAAGATCAGATTCGTCCACAAAG...TCCACAAAGAGATGGGCATAATACCAAGCTGGGGTGGCACCACCCGGCTAGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR GCA 90 bp TTATACATATTAGTCACTGGAGCTTTACTTGGAGTACATCCACACGAAAAACCACGGAAATCCCGCTCCTaGCGCGAGGCGCCCTCCGCT +
Preference number: 4 (lower is better)
Translates to: LYILVTGALLGVHPHEKPRKSRS*REAPSA
Trigger: AGCGGAGGGCGCCTCGCGGCAGGAGCGGGATTTCCG...TGGTTTTTCGTGTGGATGTACTCCAAGTAAAGCTCCAGTGACTAATATGTATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000368291.6
ENST00000454859.8
ENST00000479525.6
CDS-3UTR CCA 90 bp GAGCTTGTCTACTTCCGATTATTTCAACTAGCCGGGTGGTGCCACCCCAGCTTGACTTCCGGTGGCCCTTaGATGAATTGCTTTAGCCAT +
Preference number: 4 (lower is better)
Translates to: ELVYFRLFQLAGWCHPSLTSGGP*MNCFSH
Trigger: ATGGCTAAAGCAATTCATCCAAGGGCCACCGGAAGT...CAAGCTGGGGTGGCACCACCCGGCTAGTTGAAATAATCGGAAGTAGACAAGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR CCA 90 bp CTAGCCGGGTGGTGCCACCCCAGCTTGGTATTATGCCCATCTCTTTGTGGACGATCTAATTACTTCCGGTaGCCCTTGGATGAATTGCTT +
Preference number: 4 (lower is better)
Translates to: LAGWCHPSLVLCPSLCGRSNYFR*PLDELL
Trigger: AAGCAATTCATCCAAGGGCCACCGGAAGTAATTAGA...TCGTCCACAAAGAGATGGGCATAATACCAAGCTGGGGTGGCACCACCCGGCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR TCA 90 bp CGATTATTTCAACTAGCCGGGTGGTGCCACCCCAGCTTGGTATTATGCCCATCTCCATTGTCTTCCTTCTaGAGGTCAATGGATCCACCA +
Preference number: 4 (lower is better)
Translates to: RLFQLAGWCHPSLVLCPSPLSSF*RSMDPP
Trigger: TGGTGGATCCATTGACCTTCAGAAGGAAGACAATGG...AGATGGGCATAATACCAAGCTGGGGTGGCACCACCCGGCTAGTTGAAATAATCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000479525.6
CDS-3UTR TCA 90 bp CTAGCCGGGTGGTGCCACCCCAGCTTGGTATTATGCCCATCTCTTTGTGGACGAAGATTTAGTTTCATCTaGAGACTGCAAGACCTCTTC +
Preference number: 4 (lower is better)
Translates to: LAGWCHPSLVLCPSLCGRRFSFI*RLQDLF
Trigger: GAAGAGGTCTTGCAGTCTTCAGATGAAACTAAATCT...TCGTCCACAAAGAGATGGGCATAATACCAAGCTGGGGTGGCACCACCCGGCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR GCA 90 bp TTCCGATTATTTCAACTAGCCGGGTGGTGCCACCCCAGCTTGGTATTATGCCCATGCTGTAGTAAATTCTaGTCCTCCACCCAATGCCCA +
Preference number: 4 (lower is better)
Translates to: FRLFQLAGWCHPSLVLCPCCSKF*SSTQCP
Trigger: TGGGCATTGGGTGGAGGAGCAGAATTTACTACAGCA...TGGGCATAATACCAAGCTGGGGTGGCACCACCCGGCTAGTTGAAATAATCGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR GCA 90 bp CCAGGTTCAAGCAATCCTTCCACCTCAGACTCCCAAGTTGTAGGACTACAGGCATGCTGTAGTAAATTCTaGTCCTCCACCCAATGCCCA +
Preference number: 4 (lower is better)
Translates to: PGSSNPSTSDSQVVGLQACCSKF*SSTQCP
Trigger: TGGGCATTGGGTGGAGGAGCAGAATTTACTACAGCA...TGCCTGTAGTCCTACAACTTGGGAGTCTGAGGTGGAAGGATTGCTTGAACCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461239.2
CDS-3UTR GCA 90 bp ATTTCAACTAGCCGGGTGGTGCCACCCCAGCTTGGTATTATGCCCATCTCTTTGCCCAGCTTGGTATTATaGCCATCTCTTTGTGGACGA +
Preference number: 4 (lower is better)
Translates to: ISTSRVVPPQLGIMPISLPSLVL*PSLCGR
Trigger: TCGTCCACAAAGAGATGGGCATAATACCAAGCTGGG...CAAAGAGATGGGCATAATACCAAGCTGGGGTGGCACCACCCGGCTAGTTGAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR GCA 90 bp TTTGAATCCAGTTTAAGGGCCCCACTCAACACTTTGAGAGCTTGTCTACTTCCGCAACTAGCCGGGTGGTaGCACCCCAGCTTGGTATTA +
Preference number: 4 (lower is better)
Translates to: FESSLRAPLNTLRACLLPQLAGW*HPSLVL
Trigger: TAATACCAAGCTGGGGTGGCACCACCCGGCTAGTTG...CGGAAGTAGACAAGCTCTCAAAGTGTTGAGTGGGGCCCTTAAACTGGATTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR GCA 90 bp CGATTATTTCAACTAGCCGGGTGGTGCCACCCCAGCTTGGTATTATGCCCATCTGGCCCTTGGATGAATTaGTTTAGCCATTCTTGTGCC +
Preference number: 4 (lower is better)
Translates to: RLFQLAGWCHPSLVLCPSGPWMN*FSHSCA
Trigger: GGCACAAGAATGGCTAAAGCAATTCATCCAAGGGCC...AGATGGGCATAATACCAAGCTGGGGTGGCACCACCCGGCTAGTTGAAATAATCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR TCA 90 bp CTACTTCCGATTATTTCAACTAGCCGGGTGGTGCCACCCCAGCTTGGTATTATGCCATTGTCTTCCTTCTaGAGGTCAATGGATCCACCA +
Preference number: 4 (lower is better)
Translates to: LLPIISTSRVVPPQLGIMPLSSF*RSMDPP
Trigger: TGGTGGATCCATTGACCTTCAGAAGGAAGACAATGG...CATAATACCAAGCTGGGGTGGCACCACCCGGCTAGTTGAAATAATCGGAAGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000479525.6
CDS-3UTR TCA 90 bp AAAGATCTCTTTCGTTCTGTAATGCTTCCTCCAAATATAGCTCTCTGCCTGAACTTGCCCCACGGACAATaGGGCCTTTCCCCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: KDLFRSVMLPPNIALCLNLPHGQ*GLSPLS
Trigger: GGACAGAGGGGAAAGGCCTCATTGTCCGTGGGGCAA...GTTCAGGCAGAGAGCTATATTTGGAGGAAGCATTACAGAACGAAAGAGATCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR TCA 90 bp TTTCAACTAGCCGGGTGGTGCCACCCCAGCTTGGTATTATGCCCATCTCTTTGTCTTTGTGGACGAATCTaGTCTTACTCTCTGGAGTCA +
Preference number: 4 (lower is better)
Translates to: FQLAGWCHPSLVLCPSLCLCGRI*SYSLES
Trigger: TGACTCCAGAGAGTAAGATCAGATTCGTCCACAAAG...ACAAAGAGATGGGCATAATACCAAGCTGGGGTGGCACCACCCGGCTAGTTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR TCA 90 bp GCCACCCCAGCTTGGTATTATGCCCATCTCTTTGTGGACGAATCTGATCTTACTCCCCACTCAACACTTTaGGAGCTTGTCTACTTCCGA +
Preference number: 4 (lower is better)
Translates to: ATPAWYYAHLFVDESDLTPHSTL*ELVYFR
Trigger: TCGGAAGTAGACAAGCTCTCAAAGTGTTGAGTGGGG...AGTAAGATCAGATTCGTCCACAAAGAGATGGGCATAATACCAAGCTGGGGTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR GCA 90 bp ACATTTATACATATTAGTCACTGGAGCTTTACTTGGAGTACATCCACACGAAAACCCCCGGGACCATCGTaGGCCCCTGTCCTCCGTTCT +
Preference number: 4 (lower is better)
Translates to: TFIHISHWSFTWSTSTRKPPGPS*APVLRS
Trigger: AGAACGGAGGACAGGGGCGCACGATGGTCCCGGGGG...TTTTCGTGTGGATGTACTCCAAGTAAAGCTCCAGTGACTAATATGTATAAATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000368291.6
ENST00000454591.6
ENST00000454859.8
ENST00000479525.6
ENST00000528402.5
CDS-3UTR GCA 90 bp TACTTCCGATTATTTCAACTAGCCGGGTGGTGCCACCCCAGCTTGGTATTATGCCCCAGCTTGGTATTATaGCCATCTCTTTGTGGACGA +
Preference number: 4 (lower is better)
Translates to: YFRLFQLAGWCHPSLVLCPSLVL*PSLCGR
Trigger: TCGTCCACAAAGAGATGGGCATAATACCAAGCTGGG...GCATAATACCAAGCTGGGGTGGCACCACCCGGCTAGTTGAAATAATCGGAAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR GCA 90 bp TGTCTACTTCCGATTATTTCAACTAGCCGGGTGGTGCCACCCCAGCTTGGTATTCCCAGCTTGGTATTATaGCCATCTCTTTGTGGACGA +
Preference number: 4 (lower is better)
Translates to: CLLPIISTSRVVPPQLGIPSLVL*PSLCGR
Trigger: TCGTCCACAAAGAGATGGGCATAATACCAAGCTGGG...AATACCAAGCTGGGGTGGCACCACCCGGCTAGTTGAAATAATCGGAAGTAGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR GCA 90 bp TACTTCCGATTATTTCAACTAGCCGGGTGGTGCCACCCCAGCTTGGTATTATGCGGCCCTTGGATGAATTaGTTTAGCCATTCTTGTGCC +
Preference number: 4 (lower is better)
Translates to: YFRLFQLAGWCHPSLVLCGPWMN*FSHSCA
Trigger: GGCACAAGAATGGCTAAAGCAATTCATCCAAGGGCC...GCATAATACCAAGCTGGGGTGGCACCACCCGGCTAGTTGAAATAATCGGAAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR GCA 90 bp CCGATTATTTCAACTAGCCGGGTGGTGCCACCCCAGCTTGGTATTATGCCCATCCTTGTTAAGGTGTTTTaGATGAACATGCATACGGCC +
Preference number: 4 (lower is better)
Translates to: PIISTSRVVPPQLGIMPILVKVF*MNMHTA
Trigger: GGCCGTATGCATGTTCATGCAAAACACCTTAACAAG...GATGGGCATAATACCAAGCTGGGGTGGCACCACCCGGCTAGTTGAAATAATCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368292.10
ENST00000417628.6
CDS-3UTR CCA 90 bp CCGATTATTTCAACTAGCCGGGTGGTGCCACCCCAGCTTGGTATTATGCCCATCATGCCCATCTCTTTGTaGACGAATCTGATCTTACTC +
Preference number: 4 (lower is better)
Translates to: PIISTSRVVPPQLGIMPIMPISL*TNLILL
Trigger: GAGTAAGATCAGATTCGTCCACAAAGAGATGGGCAT...GATGGGCATAATACCAAGCTGGGGTGGCACCACCCGGCTAGTTGAAATAATCGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
3UTR CAA 72 bp GTGGTGCCACCCCAGCTTGGTATTATGCCCATCTCTTaGTGGACGAATCTGATCTTACTCTCTGGAGTCATT +
Preference number: 4 (lower is better)
Translates to: VVPPQLGIMPIS*WTNLILLSGVI
Trigger: AATGACTCCAGAGAGTAAGATCAGATTCGTCCACAAAGAGATGGGCATAATACCAAGCTGGGGTGGCACCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR TCA 90 bp AGTCTCATAAATCTTGTTAAGGTGTTTTGCATGAACATGCATACGGCCATTCCATTGCCCCACGGACAATaGGGCCTTTCCCCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: SLINLVKVFCMNMHTAIPLPHGQ*GLSPLS
Trigger: GGACAGAGGGGAAAGGCCTCATTGTCCGTGGGGCAA...TGGAATGGCCGTATGCATGTTCATGCAAAACACCTTAACAAGATTTATGAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000526299.5
CDS-3UTR TCA 90 bp TTAGTTTCATCTGAAGACTGCAAGACCTCTTCAACCATTCCTATGTTTAGAGCATTGCCCCACGGACAATaGGGCCTTTCCCCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: LVSSEDCKTSSTIPMFRALPHGQ*GLSPLS
Trigger: GGACAGAGGGGAAAGGCCTCATTGTCCGTGGGGCAA...TGCTCTAAACATAGGAATGGTTGAAGAGGTCTTGCAGTCTTCAGATGAAACTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR TCA 90 bp CCAGCTTGGTATTATGCCCATCTCTTTGTGGACGAATCTGATCTTACTCTCTGGCCCCACTCAACACTTTaGGAGCTTGTCTACTTCCGA +
Preference number: 4 (lower is better)
Translates to: PAWYYAHLFVDESDLTLWPHSTL*ELVYFR
Trigger: TCGGAAGTAGACAAGCTCTCAAAGTGTTGAGTGGGG...CCAGAGAGTAAGATCAGATTCGTCCACAAAGAGATGGGCATAATACCAAGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR TCA 90 bp GTGGTGCCACCCCAGCTTGGTATTATGCCCATCTCTTTGTGGACGAATCTGATCAAGGGCCATTTCCCATaGATTTTACTCCAGCTGTTT +
Preference number: 4 (lower is better)
Translates to: VVPPQLGIMPISLWTNLIKGHFP*ILLQLF
Trigger: AAACAGCTGGAGTAAAATTCATGGGAAATGGCCCTT...GATCAGATTCGTCCACAAAGAGATGGGCATAATACCAAGCTGGGGTGGCACCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368295.8
ENST00000528402.5
CDS-3UTR GCA 90 bp CCACCCCAGCTTGGTATTATGCCCATCTCTTTGTGGACGAATCTGATCTTACTCTGCTGTAGTAAATTCTaGTCCTCCACCCAATGCCCA +
Preference number: 4 (lower is better)
Translates to: PPQLGIMPISLWTNLILLCCSKF*SSTQCP
Trigger: TGGGCATTGGGTGGAGGAGCAGAATTTACTACAGCA...GAGTAAGATCAGATTCGTCCACAAAGAGATGGGCATAATACCAAGCTGGGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR GCA 90 bp GGTATTATGCCCATCTCTTTGTGGACGAATCTGATCTTACTCTCTGGAGTCATTCAACTAGCCGGGTGGTaGCACCCCAGCTTGGTATTA +
Preference number: 4 (lower is better)
Translates to: GIMPISLWTNLILLSGVIQLAGW*HPSLVL
Trigger: TAATACCAAGCTGGGGTGGCACCACCCGGCTAGTTG...AATGACTCCAGAGAGTAAGATCAGATTCGTCCACAAAGAGATGGGCATAATACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR GCA 90 bp GAGCTTGTCTACTTCCGATTATTTCAACTAGCCGGGTGGTGCCACCCCAGCTTGGTTTCATCTGAAGACTaGAAGACCTCTTCAACCATT +
Preference number: 4 (lower is better)
Translates to: ELVYFRLFQLAGWCHPSLVSSED*KTSSTI
Trigger: AATGGTTGAAGAGGTCTTGCAGTCTTCAGATGAAAC...CAAGCTGGGGTGGCACCACCCGGCTAGTTGAAATAATCGGAAGTAGACAAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR GCA 90 bp GCCAGGAATAGGTTTTGTATAGAAGCTCTCCTTTTAAACACTGCTCTTTGGTTACGCCCGTTCTATTACTaGGCTGCTCCCTCCCCTCGT +
Preference number: 4 (lower is better)
Translates to: ARNRFCIEALLLNTALWLRPFYY*AAPSPR
Trigger: ACGAGGGGAGGGAGCAGCGCAGTAATAGAACGGGCG...TAACCAAAGAGCAGTGTTTAAAAGGAGAGCTTCTATACAAAACCTATTCCTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000531967.5
CDS-3UTR CCA 90 bp TTCCGATTATTTCAACTAGCCGGGTGGTGCCACCCCAGCTTGGTATTATGCCCAATGCCCATCTCTTTGTaGACGAATCTGATCTTACTC +
Preference number: 4 (lower is better)
Translates to: FRLFQLAGWCHPSLVLCPMPISL*TNLILL
Trigger: GAGTAAGATCAGATTCGTCCACAAAGAGATGGGCAT...TGGGCATAATACCAAGCTGGGGTGGCACCACCCGGCTAGTTGAAATAATCGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR CCA 90 bp AGTTTAAGGGCCCCACTCAACACTTTGAGAGCTTGTCTACTTCCGATTATTTCATTTCAACTAGCCGGGTaGTGCCACCCCAGCTTGGTA +
Preference number: 4 (lower is better)
Translates to: SLRAPLNTLRACLLPIISFQLAG*CHPSLV
Trigger: TACCAAGCTGGGGTGGCACCACCCGGCTAGTTGAAA...TGAAATAATCGGAAGTAGACAAGCTCTCAAAGTGTTGAGTGGGGCCCTTAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR CCA 90 bp TTAAGGGCCCCACTCAACACTTTGAGAGCTTGTCTACTTCCGATTATTTCAACTTTTCAACTAGCCGGGTaGTGCCACCCCAGCTTGGTA +
Preference number: 4 (lower is better)
Translates to: LRAPLNTLRACLLPIISTFQLAG*CHPSLV
Trigger: TACCAAGCTGGGGTGGCACCACCCGGCTAGTTGAAA...AGTTGAAATAATCGGAAGTAGACAAGCTCTCAAAGTGTTGAGTGGGGCCCTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR CCA 90 bp AATTTGCAGGCCCACCCCAAACTGTTCCTAAAAGATCTCTTTCGTTCTGTAATGTTTCAACTAGCCGGGTaGTGCCACCCCAGCTTGGTA +
Preference number: 4 (lower is better)
Translates to: NLQAHPKLFLKDLFRSVMFQLAG*CHPSLV
Trigger: TACCAAGCTGGGGTGGCACCACCCGGCTAGTTGAAA...CATTACAGAACGAAAGAGATCTTTTAGGAACAGTTTGGGGTGGGCCTGCAAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368295.8
ENST00000479525.6
ENST00000528402.5
CDS-3UTR CCA 90 bp ATCACATGCTGTAGTAAATTCTGCTCCTCCACCCAATGCCCAACCTTGAACCAGACTTCCGGTGGCCCTTaGATGAATTGCTTTAGCCAT +
Preference number: 4 (lower is better)
Translates to: ITCCSKFCSSTQCPTLNQTSGGP*MNCFSH
Trigger: ATGGCTAAAGCAATTCATCCAAGGGCCACCGGAAGT...CTGGTTCAAGGTTGGGCATTGGGTGGAGGAGCAGAATTTACTACAGCATGTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
CDS-3UTR CCA 90 bp CTAAATGTTCCAGATTACGCAGTAAATACCCAAGTGAGTAATTGGCAAGAAATGGGGAGGCTCGCCGTCTaGGACACGTTTGGAGAAGCG +
Preference number: 4 (lower is better)
Translates to: LNVPDYAVNTQVSNWQEMGRLAV*DTFGEA
Trigger: CGCTTCTCCAAACGTGTCCCAGACGGCGAGCCTCCC...CATTTCTTGCCAATTACTCACTTGGGTATTTACTGCGTAATCTGGAACATTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474289.6
CDS-3UTR TCA 90 bp CCACTCAACACTTTGAGAGCTTGTCTACTTCCGATTATTTCAACTAGCCGGGTGCCATTGTCTTCCTTCTaGAGGTCAATGGATCCACCA +
Preference number: 4 (lower is better)
Translates to: PLNTLRACLLPIISTSRVPLSSF*RSMDPP
Trigger: TGGTGGATCCATTGACCTTCAGAAGGAAGACAATGG...CACCCGGCTAGTTGAAATAATCGGAAGTAGACAAGCTCTCAAAGTGTTGAGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000479525.6
CDS-3UTR TCA 90 bp CTAAATGTTCCAGATTACGCAGTAAATACCCAAGTGAGTAATTGGCAAGAAATGTTGCCCCACGGACAATaGGGCCTTTCCCCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: LNVPDYAVNTQVSNWQEMLPHGQ*GLSPLS
Trigger: GGACAGAGGGGAAAGGCCTCATTGTCCGTGGGGCAA...CATTTCTTGCCAATTACTCACTTGGGTATTTACTGCGTAATCTGGAACATTTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000368291.6
ENST00000368295.8
ENST00000454591.6
ENST00000454859.8
ENST00000474289.6
ENST00000479525.6
ENST00000528402.5
ENST00000531967.5
CDS-3UTR TCA 90 bp TTTGCAGGCCCACCCCAAACTGTTCCTAAAAGATCTCTTTCGTTCTGTAATGCTCCCAATGCCCAACCTTaGACCAGCGCAACACTTATT +
Preference number: 4 (lower is better)
Translates to: FAGPPQTVPKRSLSFCNAPNAQP*TSATLI
Trigger: AATAAGTGTTGCGCTGGTTCAAGGTTGGGCATTGGG...AGCATTACAGAACGAAAGAGATCTTTTAGGAACAGTTTGGGGTGGGCCTGCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368295.8
ENST00000479525.6
ENST00000528402.5
CDS-3UTR TCA 90 bp TTGAGAGCTTGTCTACTTCCGATTATTTCAACTAGCCGGGTGGTGCCACCCCAGAGATTTAGTTTCATCTaGAGACTGCAAGACCTCTTC +
Preference number: 4 (lower is better)
Translates to: LRACLLPIISTSRVVPPQRFSFI*RLQDLF
Trigger: GAAGAGGTCTTGCAGTCTTCAGATGAAACTAAATCT...CTGGGGTGGCACCACCCGGCTAGTTGAAATAATCGGAAGTAGACAAGCTCTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR TCA 90 bp ATCACATGCTGTAGTAAATTCTGCTCCTCCACCCAATGCCCAACCTTGAACCAGTTGCAGGATGCTTCATaGGTCCCTTCAAGTGGTTTA +
Preference number: 4 (lower is better)
Translates to: ITCCSKFCSSTQCPTLNQLQDAS*VPSSGL
Trigger: TAAACCACTTGAAGGGACTCATGAAGCATCCTGCAA...CTGGTTCAAGGTTGGGCATTGGGTGGAGGAGCAGAATTTACTACAGCATGTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368295.8
CDS-3UTR GCA 90 bp GCTTGGTATTATGCCCATCTCTTTGTGGACGAATCTGATCTTACTCTCTGGAGTCACGCTTTTCCGTTTTaGGTGCCTTTGTTTCCGCTC +
Preference number: 4 (lower is better)
Translates to: AWYYAHLFVDESDLTLWSHAFPF*VPLFPL
Trigger: GAGCGGAAACAAAGGCACGCAAAACGGAAAAGCGTG...ACTCCAGAGAGTAAGATCAGATTCGTCCACAAAGAGATGGGCATAATACCAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368291.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR GCA 90 bp CCAGCTTGGTATTATGCCCATCTCTTTGTGGACGAATCTGATCTTACTCTCTGGTGCTGTAGTAAATTCTaGTCCTCCACCCAATGCCCA +
Preference number: 4 (lower is better)
Translates to: PAWYYAHLFVDESDLTLWCCSKF*SSTQCP
Trigger: TGGGCATTGGGTGGAGGAGCAGAATTTACTACAGCA...CCAGAGAGTAAGATCAGATTCGTCCACAAAGAGATGGGCATAATACCAAGCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR GCA 90 bp TTTGAATCCAGTTTAAGGGCCCCACTCAACACTTTGAGAGCTTGTCTACTTCCGCCCAGCTTGGTATTATaGCCATCTCTTTGTGGACGA +
Preference number: 4 (lower is better)
Translates to: FESSLRAPLNTLRACLLPPSLVL*PSLCGR
Trigger: TCGTCCACAAAGAGATGGGCATAATACCAAGCTGGG...CGGAAGTAGACAAGCTCTCAAAGTGTTGAGTGGGGCCCTTAAACTGGATTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR GCA 90 bp TTCCGATTATTTCAACTAGCCGGGTGGTGCCACCCCAGCTTGGTATTATGCCCAGTTTCATCTGAAGACTaGAAGACCTCTTCAACCATT +
Preference number: 4 (lower is better)
Translates to: FRLFQLAGWCHPSLVLCPVSSED*KTSSTI
Trigger: AATGGTTGAAGAGGTCTTGCAGTCTTCAGATGAAAC...TGGGCATAATACCAAGCTGGGGTGGCACCACCCGGCTAGTTGAAATAATCGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR GCA 90 bp GCCTCTAAATTTGCAGGCCCACCCCAAACTGTTCCTAAAAGATCTCTTTCGTTCGGCCCTTGGATGAATTaGTTTAGCCATTCTTGTGCC +
Preference number: 4 (lower is better)
Translates to: ASKFAGPPQTVPKRSLSFGPWMN*FSHSCA
Trigger: GGCACAAGAATGGCTAAAGCAATTCATCCAAGGGCC...GAACGAAAGAGATCTTTTAGGAACAGTTTGGGGTGGGCCTGCAAATTTAGAGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368295.8
ENST00000479525.6
ENST00000528402.5
CDS-3UTR GCA 90 bp ATTTCAACTAGCCGGGTGGTGCCACCCCAGCTTGGTATTATGCCCATCTCTTTGATTTATGTTGCAGGATaGTTCATGAGTCCCTTCAAG +
Preference number: 4 (lower is better)
Translates to: ISTSRVVPPQLGIMPISLIYVAG*FMSPFK
Trigger: CTTGAAGGGACTCATGAAGCATCCTGCAACATAAAT...CAAAGAGATGGGCATAATACCAAGCTGGGGTGGCACCACCCGGCTAGTTGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368295.8
CDS-3UTR CCA 90 bp TCTCTTTCGTTCTGTAATGCTTCCTCCAAATATAGCTCTCTGCCTGAACAAACATTTCAACTAGCCGGGTaGTGCCACCCCAGCTTGGTA +
Preference number: 4 (lower is better)
Translates to: SLSFCNASSKYSSLPEQTFQLAG*CHPSLV
Trigger: TACCAAGCTGGGGTGGCACCACCCGGCTAGTTGAAA...TGTTTGTTCAGGCAGAGAGCTATATTTGGAGGAAGCATTACAGAACGAAAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR CCA 90 bp AACGCCAGGAATAGGTTTTGTATAGAAGCTCTCCTTTTAAACACTGCTCTTTGGTTTCAACTAGCCGGGTaGTGCCACCCCAGCTTGGTA +
Preference number: 4 (lower is better)
Translates to: NARNRFCIEALLLNTALWFQLAG*CHPSLV
Trigger: TACCAAGCTGGGGTGGCACCACCCGGCTAGTTGAAA...CCAAAGAGCAGTGTTTAAAAGGAGAGCTTCTATACAAAACCTATTCCTGGCGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000368295.8
ENST00000454591.6
ENST00000454859.8
ENST00000474289.6
ENST00000528402.5
ENST00000531967.5
CDS-3UTR CCA 90 bp GCAGGATGCTTCATGAGTCCCTTCAAGTGGTTTAAAACTACATCAACAGTAGTTTTTCAACTAGCCGGGTaGTGCCACCCCAGCTTGGTA +
Preference number: 4 (lower is better)
Translates to: AGCFMSPFKWFKTTSTVVFQLAG*CHPSLV
Trigger: TACCAAGCTGGGGTGGCACCACCCGGCTAGTTGAAA...AACTACTGTTGATGTAGTTTTAAACCACTTGAAGGGACTCATGAAGCATCCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000368295.8
ENST00000454859.8
ENST00000474289.6
ENST00000531967.5
CDS-3UTR CCA 90 bp CCGGGTGGTGCCACCCCAGCTTGGTATTATGCCCATCTCTTTGTGGACGAATCTATACATATTAGTCACTaGAGCTTTACTTGGAGTACA +
Preference number: 4 (lower is better)
Translates to: PGGATPAWYYAHLFVDESIHISH*SFTWST
Trigger: TGTACTCCAAGTAAAGCTCCAGTGACTAATATGTAT...AGATTCGTCCACAAAGAGATGGGCATAATACCAAGCTGGGGTGGCACCACCCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368291.6
ENST00000368295.8
ENST00000479525.6
ENST00000528402.5
CDS-3UTR CCA 90 bp CTAAATGTTCCAGATTACGCAGTAAATACCCAAGTGAGTAATTGGCAAGAAATGCCTCGCGGCGCGCTCTaGGAAGACCGATTCATCTCT +
Preference number: 4 (lower is better)
Translates to: LNVPDYAVNTQVSNWQEMPRGAL*EDRFIS
Trigger: AGAGATGAATCGGTCTTCCCAGAGCGCGCCGCGAGG...CATTTCTTGCCAATTACTCACTTGGGTATTTACTGCGTAATCTGGAACATTTAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474289.6
CDS-3UTR TCA 90 bp TTAGTCACTGGAGCTTTACTTGGAGTACATCCACACGAAAAACCAATTATTTATTTGCCCCACGGACAATaGGGCCTTTCCCCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: LVTGALLGVHPHEKPIIYLPHGQ*GLSPLS
Trigger: GGACAGAGGGGAAAGGCCTCATTGTCCGTGGGGCAA...ATAAATAATTGGTTTTTCGTGTGGATGTACTCCAAGTAAAGCTCCAGTGACTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000368291.6
ENST00000368295.8
ENST00000479525.6
ENST00000528402.5
CDS-3UTR TCA 90 bp ACATTTATACATATTAGTCACTGGAGCTTTACTTGGAGTACATCCACACGAAAATTGCCCCACGGACAATaGGGCCTTTCCCCTCTGTCC +
Preference number: 4 (lower is better)
Translates to: TFIHISHWSFTWSTSTRKLPHGQ*GLSPLS
Trigger: GGACAGAGGGGAAAGGCCTCATTGTCCGTGGGGCAA...TTTTCGTGTGGATGTACTCCAAGTAAAGCTCCAGTGACTAATATGTATAAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000368291.6
ENST00000368295.8
ENST00000454591.6
ENST00000454859.8
ENST00000474289.6
ENST00000479525.6
ENST00000528402.5
ENST00000531967.5
CDS-3UTR TCA 90 bp GGTATTATGCCCATCTCTTTGTGGACGAATCTGATCTTACTCTCTGGAGTCATTCCCAATGCCCAACCTTaGACCAGCGCAACACTTATT +
Preference number: 4 (lower is better)
Translates to: GIMPISLWTNLILLSGVIPNAQP*TSATLI
Trigger: AATAAGTGTTGCGCTGGTTCAAGGTTGGGCATTGGG...AATGACTCCAGAGAGTAAGATCAGATTCGTCCACAAAGAGATGGGCATAATACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR TCA 90 bp AATTTGCAGGCCCACCCCAAACTGTTCCTAAAAGATCTCTTTCGTTCTGTAATGCCCAATGCCCAACCTTaGACCAGCGCAACACTTATT +
Preference number: 4 (lower is better)
Translates to: NLQAHPKLFLKDLFRSVMPNAQP*TSATLI
Trigger: AATAAGTGTTGCGCTGGTTCAAGGTTGGGCATTGGG...CATTACAGAACGAAAGAGATCTTTTAGGAACAGTTTGGGGTGGGCCTGCAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368295.8
ENST00000479525.6
ENST00000528402.5
CDS-3UTR TCA 90 bp AGCCATTCTTGTGCCTCTTCTAGAGATTTAGTTTCATCTGAAGACTGCAAGACCCCCAATGCCCAACCTTaGACCAGCGCAACACTTATT +
Preference number: 4 (lower is better)
Translates to: SHSCASSRDLVSSEDCKTPNAQP*TSATLI
Trigger: AATAAGTGTTGCGCTGGTTCAAGGTTGGGCATTGGG...GGTCTTGCAGTCTTCAGATGAAACTAAATCTCTAGAAGAGGCACAAGAATGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR TCA 90 bp CCACTCAACACTTTGAGAGCTTGTCTACTTCCGATTATTTCAACTAGCCGGGTGCTTTGTGGACGAATCTaGTCTTACTCTCTGGAGTCA +
Preference number: 4 (lower is better)
Translates to: PLNTLRACLLPIISTSRVLCGRI*SYSLES
Trigger: TGACTCCAGAGAGTAAGATCAGATTCGTCCACAAAG...CACCCGGCTAGTTGAAATAATCGGAAGTAGACAAGCTCTCAAAGTGTTGAGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR TCA 90 bp GAATCCAGTTTAAGGGCCCCACTCAACACTTTGAGAGCTTGTCTACTTCCGATTCTTTGTGGACGAATCTaGTCTTACTCTCTGGAGTCA +
Preference number: 4 (lower is better)
Translates to: ESSLRAPLNTLRACLLPILCGRI*SYSLES
Trigger: TGACTCCAGAGAGTAAGATCAGATTCGTCCACAAAG...AATCGGAAGTAGACAAGCTCTCAAAGTGTTGAGTGGGGCCCTTAAACTGGATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR TCA 90 bp CCAATGCCCAACCTTGAACCAGCGCAACACTTATTAAAGGAAGTCTTGATAGGCCTTTGTGGACGAATCTaGTCTTACTCTCTGGAGTCA +
Preference number: 4 (lower is better)
Translates to: PMPNLEPAQHLLKEVLIGLCGRI*SYSLES
Trigger: TGACTCCAGAGAGTAAGATCAGATTCGTCCACAAAG...GCCTATCAAGACTTCCTTTAATAAGTGTTGCGCTGGTTCAAGGTTGGGCATTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368292.10
ENST00000417628.6
CDS-3UTR TCA 90 bp TTAGCAATAGCCTCTAAATTTGCAGGCCCACCCCAAACTGTTCCTAAAAGATCTCCCCACTCAACACTTTaGGAGCTTGTCTACTTCCGA +
Preference number: 4 (lower is better)
Translates to: LAIASKFAGPPQTVPKRSPHSTL*ELVYFR
Trigger: TCGGAAGTAGACAAGCTCTCAAAGTGTTGAGTGGGG...AGATCTTTTAGGAACAGTTTGGGGTGGGCCTGCAAATTTAGAGGCTATTGCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368295.8
ENST00000479525.6
ENST00000528402.5
CDS-3UTR TCA 90 bp TTTAAGGGCCCCACTCAACACTTTGAGAGCTTGTCTACTTCCGATTATTTCAACCCCCACTCAACACTTTaGGAGCTTGTCTACTTCCGA +
Preference number: 4 (lower is better)
Translates to: FKGPTQHFESLSTSDYFNPHSTL*ELVYFR
Trigger: TCGGAAGTAGACAAGCTCTCAAAGTGTTGAGTGGGG...GTTGAAATAATCGGAAGTAGACAAGCTCTCAAAGTGTTGAGTGGGGCCCTTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR TCA 90 bp TTAAGGGCCCCACTCAACACTTTGAGAGCTTGTCTACTTCCGATTATTTCAACTCCCCACTCAACACTTTaGGAGCTTGTCTACTTCCGA +
Preference number: 4 (lower is better)
Translates to: LRAPLNTLRACLLPIISTPHSTL*ELVYFR
Trigger: TCGGAAGTAGACAAGCTCTCAAAGTGTTGAGTGGGG...AGTTGAAATAATCGGAAGTAGACAAGCTCTCAAAGTGTTGAGTGGGGCCCTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR TCA 90 bp AGCCATTCTTGTGCCTCTTCTAGAGATTTAGTTTCATCTGAAGACTGCAAGACCCCCCACTCAACACTTTaGGAGCTTGTCTACTTCCGA +
Preference number: 4 (lower is better)
Translates to: SHSCASSRDLVSSEDCKTPHSTL*ELVYFR
Trigger: TCGGAAGTAGACAAGCTCTCAAAGTGTTGAGTGGGG...GGTCTTGCAGTCTTCAGATGAAACTAAATCTCTAGAAGAGGCACAAGAATGGCT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR TCA 90 bp CCAGGTTCAAGCAATCCTTCCACCTCAGACTCCCAAGTTGTAGGACTACAGGCAAAATGTTCTCAATCTTaGTTGTGGAGGTGGTTACAT +
Preference number: 4 (lower is better)
Translates to: PGSSNPSTSDSQVVGLQAKCSQS*LWRWLH
Trigger: ATGTAACCACCTCCACAATCAAGATTGAGAACATTT...TGCCTGTAGTCCTACAACTTGGGAGTCTGAGGTGGAAGGATTGCTTGAACCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461239.2
CDS-3UTR GCA 90 bp TTTCCTTTCTTAGCAATAGCCTCTAAATTTGCAGGCCCACCCCAAACTGTTCCTTGCTGTAGTAAATTCTaGTCCTCCACCCAATGCCCA +
Preference number: 4 (lower is better)
Translates to: FPFLAIASKFAGPPQTVPCCSKF*SSTQCP
Trigger: TGGGCATTGGGTGGAGGAGCAGAATTTACTACAGCA...AGGAACAGTTTGGGGTGGGCCTGCAAATTTAGAGGCTATTGCTAAGAAAGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368295.8
ENST00000479525.6
ENST00000528402.5
CDS-3UTR GCA 90 bp GCTTGGTATTATGCCCATCTCTTTGTGGACGAATCTGATCTTACTCTCTGGAGTTGCTGTAGTAAATTCTaGTCCTCCACCCAATGCCCA +
Preference number: 4 (lower is better)
Translates to: AWYYAHLFVDESDLTLWSCCSKF*SSTQCP
Trigger: TGGGCATTGGGTGGAGGAGCAGAATTTACTACAGCA...ACTCCAGAGAGTAAGATCAGATTCGTCCACAAAGAGATGGGCATAATACCAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR GCA 90 bp CCCCAAACTGTTCCTAAAAGATCTCTTTCGTTCTGTAATGCTTCCTCCAAATATCAACTAGCCGGGTGGTaGCACCCCAGCTTGGTATTA +
Preference number: 4 (lower is better)
Translates to: PQTVPKRSLSFCNASSKYQLAGW*HPSLVL
Trigger: TAATACCAAGCTGGGGTGGCACCACCCGGCTAGTTG...ATATTTGGAGGAAGCATTACAGAACGAAAGAGATCTTTTAGGAACAGTTTGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368295.8
ENST00000479525.6
ENST00000528402.5
CDS-3UTR GCA 90 bp GCCAGGAATAGGTTTTGTATAGAAGCTCTCCTTTTAAACACTGCTCTTTGGTTACAACTAGCCGGGTGGTaGCACCCCAGCTTGGTATTA +
Preference number: 4 (lower is better)
Translates to: ARNRFCIEALLLNTALWLQLAGW*HPSLVL
Trigger: TAATACCAAGCTGGGGTGGCACCACCCGGCTAGTTG...TAACCAAAGAGCAGTGTTTAAAAGGAGAGCTTCTATACAAAACCTATTCCTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000368295.8
ENST00000454591.6
ENST00000454859.8
ENST00000474289.6
ENST00000528402.5
ENST00000531967.5
CDS-3UTR GCA 90 bp CAGTTTAAGGGCCCCACTCAACACTTTGAGAGCTTGTCTACTTCCGATTATTTCGGCCCTTGGATGAATTaGTTTAGCCATTCTTGTGCC +
Preference number: 4 (lower is better)
Translates to: QFKGPTQHFESLSTSDYFGPWMN*FSHSCA
Trigger: GGCACAAGAATGGCTAAAGCAATTCATCCAAGGGCC...GAAATAATCGGAAGTAGACAAGCTCTCAAAGTGTTGAGTGGGGCCCTTAAACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR GCA 90 bp GAGCTTGTCTACTTCCGATTATTTCAACTAGCCGGGTGGTGCCACCCCAGCTTGCCAAATATAGCTCTCTaGCTGAACAAACAGATTTTT +
Preference number: 4 (lower is better)
Translates to: ELVYFRLFQLAGWCHPSLPNIAL*LNKQIF
Trigger: AAAAATCTGTTTGTTCAGGCAGAGAGCTATATTTGG...CAAGCTGGGGTGGCACCACCCGGCTAGTTGAAATAATCGGAAGTAGACAAGCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR GCA 90 bp CCAGGTTCAAGCAATCCTTCCACCTCAGACTCCCAAGTTGTAGGACTACAGGCAGAAACTGAAATCACATaGTGTAGTAAATTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: PGSSNPSTSDSQVVGLQAETEIT*CSKFCS
Trigger: GGAGCAGAATTTACTACAGCATGTGATTTCAGTTTC...TGCCTGTAGTCCTACAACTTGGGAGTCTGAGGTGGAAGGATTGCTTGAACCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461239.2
CDS-3UTR CCA 90 bp CGTTCTGTAATGCTTCCTCCAAATATAGCTCTCTGCCTGAACAAACAGATTTTTTTTCAACTAGCCGGGTaGTGCCACCCCAGCTTGGTA +
Preference number: 4 (lower is better)
Translates to: RSVMLPPNIALCLNKQIFFQLAG*CHPSLV
Trigger: TACCAAGCTGGGGTGGCACCACCCGGCTAGTTGAAA...AAAAATCTGTTTGTTCAGGCAGAGAGCTATATTTGGAGGAAGCATTACAGAACG
46% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR CCA 90 bp TTTCCTTTCTTAGCAATAGCCTCTAAATTTGCAGGCCCACCCCAAACTGTTCCTACTTCCGGTGGCCCTTaGATGAATTGCTTTAGCCAT +
Preference number: 4 (lower is better)
Translates to: FPFLAIASKFAGPPQTVPTSGGP*MNCFSH
Trigger: ATGGCTAAAGCAATTCATCCAAGGGCCACCGGAAGT...AGGAACAGTTTGGGGTGGGCCTGCAAATTTAGAGGCTATTGCTAAGAAAGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368295.8
ENST00000479525.6
ENST00000528402.5
CDS-3UTR CCA 90 bp CCACCCCAGCTTGGTATTATGCCCATCTCTTTGTGGACGAATCTGATCTTACTCTCTAATTACTTCCGGTaGCCCTTGGATGAATTGCTT +
Preference number: 4 (lower is better)
Translates to: PPQLGIMPISLWTNLILLSNYFR*PLDELL
Trigger: AAGCAATTCATCCAAGGGCCACCGGAAGTAATTAGA...GAGTAAGATCAGATTCGTCCACAAAGAGATGGGCATAATACCAAGCTGGGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR CCA 90 bp GGCCCACCCCAAACTGTTCCTAAAAGATCTCTTTCGTTCTGTAATGCTTCCTCCCACTGGAGCTTTACTTaGAGTACATCCACACGAAAA +
Preference number: 4 (lower is better)
Translates to: GPPQTVPKRSLSFCNASSHWSFT*STSTRK
Trigger: TTTTCGTGTGGATGTACTCCAAGTAAAGCTCCAGTG...GGAGGAAGCATTACAGAACGAAAGAGATCTTTTAGGAACAGTTTGGGGTGGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368291.6
ENST00000368295.8
ENST00000479525.6
ENST00000528402.5
CDS-3UTR CCA 90 bp TCTCTTTCGTTCTGTAATGCTTCCTCCAAATATAGCTCTCTGCCTGAACAAACATTTCAGGCAAAAAGCTaGAAAGGGTCCGTCGCAGGC +
Preference number: 4 (lower is better)
Translates to: SLSFCNASSKYSSLPEQTFQAKS*KGSVAG
Trigger: GCCTGCGACGGACCCTTTCCAGCTTTTTGCCTGAAA...TGTTTGTTCAGGCAGAGAGCTATATTTGGAGGAAGCATTACAGAACGAAAGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368289.6
CDS-3UTR CCA 90 bp CCAGGTTCAAGCAATCCTTCCACCTCAGACTCCCAAGTTGTAGGACTACAGGCAGTGGAGGTGGTTACATaGGTGTATATATTCATCAAA +
Preference number: 4 (lower is better)
Translates to: PGSSNPSTSDSQVVGLQAVEVVT*VYIFIK
Trigger: TTTGATGAATATATACACCCATGTAACCACCTCCAC...TGCCTGTAGTCCTACAACTTGGGAGTCTGAGGTGGAAGGATTGCTTGAACCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000461239.2
CDS-3UTR TCA 90 bp TTAAGGGCCCCACTCAACACTTTGAGAGCTTGTCTACTTCCGATTATTTCAACTCCATTGTCTTCCTTCTaGAGGTCAATGGATCCACCA +
Preference number: 4 (lower is better)
Translates to: LRAPLNTLRACLLPIISTPLSSF*RSMDPP
Trigger: TGGTGGATCCATTGACCTTCAGAAGGAAGACAATGG...AGTTGAAATAATCGGAAGTAGACAAGCTCTCAAAGTGTTGAGTGGGGCCCTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000479525.6
CDS-3UTR TCA 90 bp AGTTTAAGGGCCCCACTCAACACTTTGAGAGCTTGTCTACTTCCGATTATTTCACCATTGTCTTCCTTCTaGAGGTCAATGGATCCACCA +
Preference number: 4 (lower is better)
Translates to: SLRAPLNTLRACLLPIISPLSSF*RSMDPP
Trigger: TGGTGGATCCATTGACCTTCAGAAGGAAGACAATGG...TGAAATAATCGGAAGTAGACAAGCTCTCAAAGTGTTGAGTGGGGCCCTTAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000479525.6
CDS-3UTR TCA 90 bp TTTTTCAAAGCTCTAATTACTTCCGGTGGCCCTTGGATGAATTGCTTTAGCCATCCCAATGCCCAACCTTaGACCAGCGCAACACTTATT +
Preference number: 4 (lower is better)
Translates to: FFKALITSGGPWMNCFSHPNAQP*TSATLI
Trigger: AATAAGTGTTGCGCTGGTTCAAGGTTGGGCATTGGG...ATGGCTAAAGCAATTCATCCAAGGGCCACCGGAAGTAATTAGAGCTTTGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR TCA 90 bp CATGATGTTTTGAAATATGTAGAGCACTACATGCCAGCGCAGAATCACTTTCTCCCCAATGCCCAACCTTaGACCAGCGCAACACTTATT +
Preference number: 4 (lower is better)
Translates to: HDVLKYVEHYMPAQNHFLPNAQP*TSATLI
Trigger: AATAAGTGTTGCGCTGGTTCAAGGTTGGGCATTGGG...GAGAAAGTGATTCTGCGCTGGCATGTAGTGCTCTACATATTTCAAAACATCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000461239.2
CDS-3UTR TCA 90 bp GCAGGATGCTTCATGAGTCCCTTCAAGTGGTTTAAAACTACATCAACAGTAGTTCCCAATGCCCAACCTTaGACCAGCGCAACACTTATT +
Preference number: 4 (lower is better)
Translates to: AGCFMSPFKWFKTTSTVVPNAQP*TSATLI
Trigger: AATAAGTGTTGCGCTGGTTCAAGGTTGGGCATTGGG...AACTACTGTTGATGTAGTTTTAAACCACTTGAAGGGACTCATGAAGCATCCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368295.8
ENST00000454859.8
ENST00000474289.6
ENST00000531967.5
CDS-3UTR TCA 90 bp CCTTTCTTAGCAATAGCCTCTAAATTTGCAGGCCCACCCCAAACTGTTCCTAAACTTTGTGGACGAATCTaGTCTTACTCTCTGGAGTCA +
Preference number: 4 (lower is better)
Translates to: PFLAIASKFAGPPQTVPKLCGRI*SYSLES
Trigger: TGACTCCAGAGAGTAAGATCAGATTCGTCCACAAAG...TTTAGGAACAGTTTGGGGTGGGCCTGCAAATTTAGAGGCTATTGCTAAGAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368295.8
ENST00000479525.6
ENST00000528402.5
CDS-3UTR TCA 90 bp GCAGGATGCTTCATGAGTCCCTTCAAGTGGTTTAAAACTACATCAACAGTAGTTCCCCACTCAACACTTTaGGAGCTTGTCTACTTCCGA +
Preference number: 4 (lower is better)
Translates to: AGCFMSPFKWFKTTSTVVPHSTL*ELVYFR
Trigger: TCGGAAGTAGACAAGCTCTCAAAGTGTTGAGTGGGG...AACTACTGTTGATGTAGTTTTAAACCACTTGAAGGGACTCATGAAGCATCCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368295.8
ENST00000454859.8
ENST00000474289.6
ENST00000531967.5
CDS-3UTR TCA 90 bp ACTTTGAGAGCTTGTCTACTTCCGATTATTTCAACTAGCCGGGTGGTGCCACCCAATTGTAGAATCAGTTaGCTTTCCATGTCATGGCTA +
Preference number: 4 (lower is better)
Translates to: TLRACLLPIISTSRVVPPNCRIS*LSMSWL
Trigger: TAGCCATGACATGGAAAGTCAACTGATTCTACAATT...GGGTGGCACCACCCGGCTAGTTGAAATAATCGGAAGTAGACAAGCTCTCAAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368295.8
CDS-3UTR GCA 90 bp AGCCATTCTTGTGCCTCTTCTAGAGATTTAGTTTCATCTGAAGACTGCAAGACCTGCTGTAGTAAATTCTaGTCCTCCACCCAATGCCCA +
Preference number: 4 (lower is better)
Translates to: SHSCASSRDLVSSEDCKTCCSKF*SSTQCP
Trigger: TGGGCATTGGGTGGAGGAGCAGAATTTACTACAGCA...GGTCTTGCAGTCTTCAGATGAAACTAAATCTCTAGAAGAGGCACAAGAATGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR GCA 90 bp AATTTGCAGGCCCACCCCAAACTGTTCCTAAAAGATCTCTTTCGTTCTGTAATGCCCAGCTTGGTATTATaGCCATCTCTTTGTGGACGA +
Preference number: 4 (lower is better)
Translates to: NLQAHPKLFLKDLFRSVMPSLVL*PSLCGR
Trigger: TCGTCCACAAAGAGATGGGCATAATACCAAGCTGGG...CATTACAGAACGAAAGAGATCTTTTAGGAACAGTTTGGGGTGGGCCTGCAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368295.8
ENST00000479525.6
ENST00000528402.5
CDS-3UTR GCA 90 bp TTATACATATTAGTCACTGGAGCTTTACTTGGAGTACATCCACACGAAAAACCACAACTAGCCGGGTGGTaGCACCCCAGCTTGGTATTA +
Preference number: 4 (lower is better)
Translates to: LYILVTGALLGVHPHEKPQLAGW*HPSLVL
Trigger: TAATACCAAGCTGGGGTGGCACCACCCGGCTAGTTG...TGGTTTTTCGTGTGGATGTACTCCAAGTAAAGCTCCAGTGACTAATATGTATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000368291.6
ENST00000368295.8
ENST00000454591.6
ENST00000454859.8
ENST00000474289.6
ENST00000479525.6
ENST00000528402.5
ENST00000531967.5
CDS-3UTR GCA 90 bp CCACCCCAGCTTGGTATTATGCCCATCTCTTTGTGGACGAATCTGATCTTACTCGTTTCATCTGAAGACTaGAAGACCTCTTCAACCATT +
Preference number: 4 (lower is better)
Translates to: PPQLGIMPISLWTNLILLVSSED*KTSSTI
Trigger: AATGGTTGAAGAGGTCTTGCAGTCTTCAGATGAAAC...GAGTAAGATCAGATTCGTCCACAAAGAGATGGGCATAATACCAAGCTGGGGTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR GCA 90 bp TTGAGAGCTTGTCTACTTCCGATTATTTCAACTAGCCGGGTGGTGCCACCCCAGCCAAATATAGCTCTCTaGCTGAACAAACAGATTTTT +
Preference number: 4 (lower is better)
Translates to: LRACLLPIISTSRVVPPQPNIAL*LNKQIF
Trigger: AAAAATCTGTTTGTTCAGGCAGAGAGCTATATTTGG...CTGGGGTGGCACCACCCGGCTAGTTGAAATAATCGGAAGTAGACAAGCTCTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR GCA 90 bp ATACGGCCATTCCATCCTCTGGAGTTCCTAGTGATTTCACAGCATTCAGATCAGCTTGTTAAGGTGTTTTaGATGAACATGCATACGGCC +
Preference number: 4 (lower is better)
Translates to: IRPFHPLEFLVISQHSDQLVKVF*MNMHTA
Trigger: GGCCGTATGCATGTTCATGCAAAACACCTTAACAAG...CTGATCTGAATGCTGTGAAATCACTAGGAACTCCAGAGGATGGAATGGCCGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526299.5
CDS-3UTR CCA 90 bp TCTCTTTCGTTCTGTAATGCTTCCTCCAAATATAGCTCTCTGCCTGAACAAACAGGTGCCACCCCAGCTTaGTATTATGCCCATCTCTTT +
Preference number: 4 (lower is better)
Translates to: SLSFCNASSKYSSLPEQTGATPA*YYAHLF
Trigger: AAAGAGATGGGCATAATACCAAGCTGGGGTGGCACC...TGTTTGTTCAGGCAGAGAGCTATATTTGGAGGAAGCATTACAGAACGAAAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR CCA 90 bp TTATACATATTAGTCACTGGAGCTTTACTTGGAGTACATCCACACGAAAAACCATTTCAACTAGCCGGGTaGTGCCACCCCAGCTTGGTA +
Preference number: 4 (lower is better)
Translates to: LYILVTGALLGVHPHEKPFQLAG*CHPSLV
Trigger: TACCAAGCTGGGGTGGCACCACCCGGCTAGTTGAAA...TGGTTTTTCGTGTGGATGTACTCCAAGTAAAGCTCCAGTGACTAATATGTATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000368291.6
ENST00000368295.8
ENST00000454591.6
ENST00000454859.8
ENST00000474289.6
ENST00000479525.6
ENST00000528402.5
ENST00000531967.5
CDS-3UTR CCA 90 bp CCAGCTTGGTATTATGCCCATCTCTTTGTGGACGAATCTGATCTTACTCTCTGGTCTAATTACTTCCGGTaGCCCTTGGATGAATTGCTT +
Preference number: 4 (lower is better)
Translates to: PAWYYAHLFVDESDLTLWSNYFR*PLDELL
Trigger: AAGCAATTCATCCAAGGGCCACCGGAAGTAATTAGA...CCAGAGAGTAAGATCAGATTCGTCCACAAAGAGATGGGCATAATACCAAGCTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR CCA 90 bp GAAATCACATGCTGTAGTAAATTCTGCTCCTCCACCCAATGCCCAACCTTGAACTCTAATTACTTCCGGTaGCCCTTGGATGAATTGCTT +
Preference number: 4 (lower is better)
Translates to: EITCCSKFCSSTQCPTLNSNYFR*PLDELL
Trigger: AAGCAATTCATCCAAGGGCCACCGGAAGTAATTAGA...GTTCAAGGTTGGGCATTGGGTGGAGGAGCAGAATTTACTACAGCATGTGATTTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
CDS-3UTR CCA 90 bp CTAAATGTTCCAGATTACGCAGTAAATACCCAAGTGAGTAATTGGCAAGAAATGCGTCTGGGACACGTTTaGAGAAGCGAGCGGTACAGT +
Preference number: 4 (lower is better)
Translates to: LNVPDYAVNTQVSNWQEMRLGHV*RSERYS
Trigger: ACTGTACCGCTCGCTTCTCCAAACGTGTCCCAGACG...CATTTCTTGCCAATTACTCACTTGGGTATTTACTGCGTAATCTGGAACATTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474289.6
CDS-3UTR TCA 90 bp AACGCCAGGAATAGGTTTTGTATAGAAGCTCTCCTTTTAAACACTGCTCTTTGGCCATTGTCTTCCTTCTaGAGGTCAATGGATCCACCA +
Preference number: 4 (lower is better)
Translates to: NARNRFCIEALLLNTALWPLSSF*RSMDPP
Trigger: TGGTGGATCCATTGACCTTCAGAAGGAAGACAATGG...CCAAAGAGCAGTGTTTAAAAGGAGAGCTTCTATACAAAACCTATTCCTGGCGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368295.8
ENST00000454859.8
ENST00000474289.6
ENST00000531967.5
CDS-3UTR TCA 90 bp TTAGTTTCATCTGAAGACTGCAAGACCTCTTCAACCATTCCTATGTTTAGAGCACCCAATGCCCAACCTTaGACCAGCGCAACACTTATT +
Preference number: 4 (lower is better)
Translates to: LVSSEDCKTSSTIPMFRAPNAQP*TSATLI
Trigger: AATAAGTGTTGCGCTGGTTCAAGGTTGGGCATTGGG...TGCTCTAAACATAGGAATGGTTGAAGAGGTCTTGCAGTCTTCAGATGAAACTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR TCA 90 bp AGTTTAAGGGCCCCACTCAACACTTTGAGAGCTTGTCTACTTCCGATTATTTCACTTTGTGGACGAATCTaGTCTTACTCTCTGGAGTCA +
Preference number: 4 (lower is better)
Translates to: SLRAPLNTLRACLLPIISLCGRI*SYSLES
Trigger: TGACTCCAGAGAGTAAGATCAGATTCGTCCACAAAG...TGAAATAATCGGAAGTAGACAAGCTCTCAAAGTGTTGAGTGGGGCCCTTAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR TCA 90 bp GCCAGGAATAGGTTTTGTATAGAAGCTCTCCTTTTAAACACTGCTCTTTGGTTACCCCACTCAACACTTTaGGAGCTTGTCTACTTCCGA +
Preference number: 4 (lower is better)
Translates to: ARNRFCIEALLLNTALWLPHSTL*ELVYFR
Trigger: TCGGAAGTAGACAAGCTCTCAAAGTGTTGAGTGGGG...TAACCAAAGAGCAGTGTTTAAAAGGAGAGCTTCTATACAAAACCTATTCCTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000368295.8
ENST00000454591.6
ENST00000454859.8
ENST00000474289.6
ENST00000528402.5
ENST00000531967.5
CDS-3UTR TCA 90 bp TTTGAATCCAGTTTAAGGGCCCCACTCAACACTTTGAGAGCTTGTCTACTTCCGAGATTTAGTTTCATCTaGAGACTGCAAGACCTCTTC +
Preference number: 4 (lower is better)
Translates to: FESSLRAPLNTLRACLLPRFSFI*RLQDLF
Trigger: GAAGAGGTCTTGCAGTCTTCAGATGAAACTAAATCT...CGGAAGTAGACAAGCTCTCAAAGTGTTGAGTGGGGCCCTTAAACTGGATTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR GCA 90 bp TTATACATATTAGTCACTGGAGCTTTACTTGGAGTACATCCACACGAAAAACCACTTTTCCGTTTTGCGTaGCTTTGTTTCCGCTCCCCC +
Preference number: 4 (lower is better)
Translates to: LYILVTGALLGVHPHEKPLFRFA*LCFRSP
Trigger: GGGGGAGCGGAAACAAAGGCACGCAAAACGGAAAAG...TGGTTTTTCGTGTGGATGTACTCCAAGTAAAGCTCCAGTGACTAATATGTATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000368291.6
ENST00000454591.6
ENST00000454859.8
ENST00000479525.6
ENST00000528402.5
CDS-3UTR GCA 90 bp CTAAATGTTCCAGATTACGCAGTAAATACCCAAGTGAGTAATTGGCAAGAAATGCTTTTCCGTTTTGCGTaGCTTTGTTTCCGCTCCCCC +
Preference number: 4 (lower is better)
Translates to: LNVPDYAVNTQVSNWQEMLFRFA*LCFRSP
Trigger: GGGGGAGCGGAAACAAAGGCACGCAAAACGGAAAAG...CATTTCTTGCCAATTACTCACTTGGGTATTTACTGCGTAATCTGGAACATTTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368291.6
ENST00000454591.6
ENST00000454859.8
ENST00000479525.6
ENST00000528402.5
CDS-3UTR GCA 90 bp CGTTCTGTAATGCTTCCTCCAAATATAGCTCTCTGCCTGAACAAACAGATTTTTCACGCTTTTCCGTTTTaGGTGCCTTTGTTTCCGCTC +
Preference number: 4 (lower is better)
Translates to: RSVMLPPNIALCLNKQIFHAFPF*VPLFPL
Trigger: GAGCGGAAACAAAGGCACGCAAAACGGAAAAGCGTG...AAAAATCTGTTTGTTCAGGCAGAGAGCTATATTTGGAGGAAGCATTACAGAACG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000368291.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR GCA 90 bp AGATCTCTTTCGTTCTGTAATGCTTCCTCCAAATATAGCTCTCTGCCTGAACAATGCTGTAGTAAATTCTaGTCCTCCACCCAATGCCCA +
Preference number: 4 (lower is better)
Translates to: RSLSFCNASSKYSSLPEQCCSKF*SSTQCP
Trigger: TGGGCATTGGGTGGAGGAGCAGAATTTACTACAGCA...TTGTTCAGGCAGAGAGCTATATTTGGAGGAAGCATTACAGAACGAAAGAGATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR GCA 90 bp AACGCCAGGAATAGGTTTTGTATAGAAGCTCTCCTTTTAAACACTGCTCTTTGGTGCTGTAGTAAATTCTaGTCCTCCACCCAATGCCCA +
Preference number: 4 (lower is better)
Translates to: NARNRFCIEALLLNTALWCCSKF*SSTQCP
Trigger: TGGGCATTGGGTGGAGGAGCAGAATTTACTACAGCA...CCAAAGAGCAGTGTTTAAAAGGAGAGCTTCTATACAAAACCTATTCCTGGCGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000368295.8
ENST00000454591.6
ENST00000454859.8
ENST00000474289.6
ENST00000528402.5
ENST00000531967.5
CDS-3UTR GCA 90 bp GCAGGATGCTTCATGAGTCCCTTCAAGTGGTTTAAAACTACATCAACAGTAGTTCCCAGCTTGGTATTATaGCCATCTCTTTGTGGACGA +
Preference number: 4 (lower is better)
Translates to: AGCFMSPFKWFKTTSTVVPSLVL*PSLCGR
Trigger: TCGTCCACAAAGAGATGGGCATAATACCAAGCTGGG...AACTACTGTTGATGTAGTTTTAAACCACTTGAAGGGACTCATGAAGCATCCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368295.8
ENST00000454859.8
ENST00000474289.6
ENST00000531967.5
CDS-3UTR GCA 90 bp GCAGGATGCTTCATGAGTCCCTTCAAGTGGTTTAAAACTACATCAACAGTAGTTGGCCCTTGGATGAATTaGTTTAGCCATTCTTGTGCC +
Preference number: 4 (lower is better)
Translates to: AGCFMSPFKWFKTTSTVVGPWMN*FSHSCA
Trigger: GGCACAAGAATGGCTAAAGCAATTCATCCAAGGGCC...AACTACTGTTGATGTAGTTTTAAACCACTTGAAGGGACTCATGAAGCATCCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368295.8
ENST00000454859.8
ENST00000474289.6
ENST00000531967.5
CDS-3UTR GCA 90 bp CTACTTCCGATTATTTCAACTAGCCGGGTGGTGCCACCCCAGCTTGGTATTATGCCAAATATAGCTCTCTaGCTGAACAAACAGATTTTT +
Preference number: 4 (lower is better)
Translates to: LLPIISTSRVVPPQLGIMPNIAL*LNKQIF
Trigger: AAAAATCTGTTTGTTCAGGCAGAGAGCTATATTTGG...CATAATACCAAGCTGGGGTGGCACCACCCGGCTAGTTGAAATAATCGGAAGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR GCA 90 bp TGTCTACTTCCGATTATTTCAACTAGCCGGGTGGTGCCACCCCAGCTTGGTATTCCAAATATAGCTCTCTaGCTGAACAAACAGATTTTT +
Preference number: 4 (lower is better)
Translates to: CLLPIISTSRVVPPQLGIPNIAL*LNKQIF
Trigger: AAAAATCTGTTTGTTCAGGCAGAGAGCTATATTTGG...AATACCAAGCTGGGGTGGCACCACCCGGCTAGTTGAAATAATCGGAAGTAGACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR GCA 90 bp AACGCCAGGAATAGGTTTTGTATAGAAGCTCTCCTTTTAAACACTGCTCTTTGGCCTGTTTCAATGCCATaGTTCTTCACAGGCTGGCTT +
Preference number: 4 (lower is better)
Translates to: NARNRFCIEALLLNTALWPVSMP*FFTGWL
Trigger: AAGCCAGCCTGTGAAGAAGCATGGCATTGAAACAGG...CCAAAGAGCAGTGTTTAAAAGGAGAGCTTCTATACAAAACCTATTCCTGGCGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531967.5
CDS-3UTR CCA 90 bp CCCCAAACTGTTCCTAAAAGATCTCTTTCGTTCTGTAATGCTTCCTCCAAATATGGTGCCACCCCAGCTTaGTATTATGCCCATCTCTTT +
Preference number: 4 (lower is better)
Translates to: PQTVPKRSLSFCNASSKYGATPA*YYAHLF
Trigger: AAAGAGATGGGCATAATACCAAGCTGGGGTGGCACC...ATATTTGGAGGAAGCATTACAGAACGAAAGAGATCTTTTAGGAACAGTTTGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368295.8
ENST00000479525.6
ENST00000528402.5
CDS-3UTR CCA 90 bp CGTTCTGTAATGCTTCCTCCAAATATAGCTCTCTGCCTGAACAAACAGATTTTTGGTGCCACCCCAGCTTaGTATTATGCCCATCTCTTT +
Preference number: 4 (lower is better)
Translates to: RSVMLPPNIALCLNKQIFGATPA*YYAHLF
Trigger: AAAGAGATGGGCATAATACCAAGCTGGGGTGGCACC...AAAAATCTGTTTGTTCAGGCAGAGAGCTATATTTGGAGGAAGCATTACAGAACG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR CCA 90 bp CTGTTCCTAAAAGATCTCTTTCGTTCTGTAATGCTTCCTCCAAATATAGCTCTCGGTGCCACCCCAGCTTaGTATTATGCCCATCTCTTT +
Preference number: 4 (lower is better)
Translates to: LFLKDLFRSVMLPPNIALGATPA*YYAHLF
Trigger: AAAGAGATGGGCATAATACCAAGCTGGGGTGGCACC...GAGAGCTATATTTGGAGGAAGCATTACAGAACGAAAGAGATCTTTTAGGAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368295.8
ENST00000479525.6
ENST00000528402.5
CDS-3UTR CCA 90 bp ACATTTATACATATTAGTCACTGGAGCTTTACTTGGAGTACATCCACACGAAAATTTCAACTAGCCGGGTaGTGCCACCCCAGCTTGGTA +
Preference number: 4 (lower is better)
Translates to: TFIHISHWSFTWSTSTRKFQLAG*CHPSLV
Trigger: TACCAAGCTGGGGTGGCACCACCCGGCTAGTTGAAA...TTTTCGTGTGGATGTACTCCAAGTAAAGCTCCAGTGACTAATATGTATAAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000368291.6
ENST00000368295.8
ENST00000454591.6
ENST00000454859.8
ENST00000474289.6
ENST00000479525.6
ENST00000528402.5
ENST00000531967.5
CDS-3UTR CCA 90 bp ATATTAGTCACTGGAGCTTTACTTGGAGTACATCCACACGAAAAACCAATTATTTTTCAACTAGCCGGGTaGTGCCACCCCAGCTTGGTA +
Preference number: 4 (lower is better)
Translates to: ILVTGALLGVHPHEKPIIFQLAG*CHPSLV
Trigger: TACCAAGCTGGGGTGGCACCACCCGGCTAGTTGAAA...AATAATTGGTTTTTCGTGTGGATGTACTCCAAGTAAAGCTCCAGTGACTAATAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000368291.6
ENST00000368295.8
ENST00000479525.6
ENST00000528402.5
CDS-3UTR CCA 90 bp GCAGGATGCTTCATGAGTCCCTTCAAGTGGTTTAAAACTACATCAACAGTAGTTACTTCCGGTGGCCCTTaGATGAATTGCTTTAGCCAT +
Preference number: 4 (lower is better)
Translates to: AGCFMSPFKWFKTTSTVVTSGGP*MNCFSH
Trigger: ATGGCTAAAGCAATTCATCCAAGGGCCACCGGAAGT...AACTACTGTTGATGTAGTTTTAAACCACTTGAAGGGACTCATGAAGCATCCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368295.8
ENST00000454859.8
ENST00000474289.6
ENST00000531967.5
CDS-3UTR CCA 90 bp CAGTTTAAGGGCCCCACTCAACACTTTGAGAGCTTGTCTACTTCCGATTATTTCCACTGGAGCTTTACTTaGAGTACATCCACACGAAAA +
Preference number: 4 (lower is better)
Translates to: QFKGPTQHFESLSTSDYFHWSFT*STSTRK
Trigger: TTTTCGTGTGGATGTACTCCAAGTAAAGCTCCAGTG...GAAATAATCGGAAGTAGACAAGCTCTCAAAGTGTTGAGTGGGGCCCTTAAACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368291.6
ENST00000368295.8
ENST00000479525.6
ENST00000528402.5
CDS-3UTR CCA 90 bp ATACGGCCATTCCATCCTCTGGAGTTCCTAGTGATTTCACAGCATTCAGATCAGTTCATTGGTCAGCACTaGTATAGAGAAATCTCTCTG +
Preference number: 4 (lower is better)
Translates to: IRPFHPLEFLVISQHSDQFIGQH*YREISL
Trigger: CAGAGAGATTTCTCTATACCAGTGCTGACCAATGAA...CTGATCTGAATGCTGTGAAATCACTAGGAACTCCAGAGGATGGAATGGCCGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526299.5
CDS-3UTR TCA 90 bp AGTCTCATAAATCTTGTTAAGGTGTTTTGCATGAACATGCATACGGCCATTCCACCATTGTCTTCCTTCTaGAGGTCAATGGATCCACCA +
Preference number: 4 (lower is better)
Translates to: SLINLVKVFCMNMHTAIPPLSSF*RSMDPP
Trigger: TGGTGGATCCATTGACCTTCAGAAGGAAGACAATGG...TGGAATGGCCGTATGCATGTTCATGCAAAACACCTTAACAAGATTTATGAGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526299.5
CDS-3UTR TCA 90 bp TTATACATATTAGTCACTGGAGCTTTACTTGGAGTACATCCACACGAAAAACCACCCAATGCCCAACCTTaGACCAGCGCAACACTTATT +
Preference number: 4 (lower is better)
Translates to: LYILVTGALLGVHPHEKPPNAQP*TSATLI
Trigger: AATAAGTGTTGCGCTGGTTCAAGGTTGGGCATTGGG...TGGTTTTTCGTGTGGATGTACTCCAAGTAAAGCTCCAGTGACTAATATGTATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000368291.6
ENST00000368295.8
ENST00000454591.6
ENST00000454859.8
ENST00000474289.6
ENST00000479525.6
ENST00000528402.5
ENST00000531967.5
CDS-3UTR TCA 90 bp CTAAATGTTCCAGATTACGCAGTAAATACCCAAGTGAGTAATTGGCAAGAAATGCCCAATGCCCAACCTTaGACCAGCGCAACACTTATT +
Preference number: 4 (lower is better)
Translates to: LNVPDYAVNTQVSNWQEMPNAQP*TSATLI
Trigger: AATAAGTGTTGCGCTGGTTCAAGGTTGGGCATTGGG...CATTTCTTGCCAATTACTCACTTGGGTATTTACTGCGTAATCTGGAACATTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000368291.6
ENST00000368295.8
ENST00000454591.6
ENST00000454859.8
ENST00000474289.6
ENST00000479525.6
ENST00000528402.5
ENST00000531967.5
CDS-3UTR TCA 90 bp GCAGGATGCTTCATGAGTCCCTTCAAGTGGTTTAAAACTACATCAACAGTAGTTCTTTGTGGACGAATCTaGTCTTACTCTCTGGAGTCA +
Preference number: 4 (lower is better)
Translates to: AGCFMSPFKWFKTTSTVVLCGRI*SYSLES
Trigger: TGACTCCAGAGAGTAAGATCAGATTCGTCCACAAAG...AACTACTGTTGATGTAGTTTTAAACCACTTGAAGGGACTCATGAAGCATCCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368295.8
ENST00000454859.8
ENST00000474289.6
ENST00000531967.5
CDS-3UTR TCA 90 bp AACGCCAGGAATAGGTTTTGTATAGAAGCTCTCCTTTTAAACACTGCTCTTTGGCTTTGTGGACGAATCTaGTCTTACTCTCTGGAGTCA +
Preference number: 4 (lower is better)
Translates to: NARNRFCIEALLLNTALWLCGRI*SYSLES
Trigger: TGACTCCAGAGAGTAAGATCAGATTCGTCCACAAAG...CCAAAGAGCAGTGTTTAAAAGGAGAGCTTCTATACAAAACCTATTCCTGGCGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000368295.8
ENST00000454591.6
ENST00000454859.8
ENST00000474289.6
ENST00000528402.5
ENST00000531967.5
CDS-3UTR TCA 90 bp TTATACATATTAGTCACTGGAGCTTTACTTGGAGTACATCCACACGAAAAACCACCCCACTCAACACTTTaGGAGCTTGTCTACTTCCGA +
Preference number: 4 (lower is better)
Translates to: LYILVTGALLGVHPHEKPPHSTL*ELVYFR
Trigger: TCGGAAGTAGACAAGCTCTCAAAGTGTTGAGTGGGG...TGGTTTTTCGTGTGGATGTACTCCAAGTAAAGCTCCAGTGACTAATATGTATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000368291.6
ENST00000368295.8
ENST00000454591.6
ENST00000454859.8
ENST00000474289.6
ENST00000479525.6
ENST00000528402.5
ENST00000531967.5
CDS-3UTR TCA 90 bp CAAACTGTTCCTAAAAGATCTCTTTCGTTCTGTAATGCTTCCTCCAAATATAGCCCCCACTCAACACTTTaGGAGCTTGTCTACTTCCGA +
Preference number: 4 (lower is better)
Translates to: QTVPKRSLSFCNASSKYSPHSTL*ELVYFR
Trigger: TCGGAAGTAGACAAGCTCTCAAAGTGTTGAGTGGGG...GCTATATTTGGAGGAAGCATTACAGAACGAAAGAGATCTTTTAGGAACAGTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368295.8
ENST00000479525.6
ENST00000528402.5
CDS-3UTR TCA 90 bp GCCAGGAATAGGTTTTGTATAGAAGCTCTCCTTTTAAACACTGCTCTTTGGTTACTGACAACACTAAACTaGAGCGCTAAGACCAACCCT +
Preference number: 4 (lower is better)
Translates to: ARNRFCIEALLLNTALWLLTTLN*SAKTNP
Trigger: AGGGTTGGTCTTAGCGCTTCAGTTTAGTGTTGTCAG...TAACCAAAGAGCAGTGTTTAAAAGGAGAGCTTCTATACAAAACCTATTCCTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474289.6
CDS-3UTR GCA 90 bp TTATACATATTAGTCACTGGAGCTTTACTTGGAGTACATCCACACGAAAAACCACACGCTTTTCCGTTTTaGGTGCCTTTGTTTCCGCTC +
Preference number: 4 (lower is better)
Translates to: LYILVTGALLGVHPHEKPHAFPF*VPLFPL
Trigger: GAGCGGAAACAAAGGCACGCAAAACGGAAAAGCGTG...TGGTTTTTCGTGTGGATGTACTCCAAGTAAAGCTCCAGTGACTAATATGTATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000368291.6
ENST00000454591.6
ENST00000454859.8
ENST00000479525.6
ENST00000528402.5
CDS-3UTR GCA 90 bp GCCAGGAATAGGTTTTGTATAGAAGCTCTCCTTTTAAACACTGCTCTTTGGTTATGCTGTAGTAAATTCTaGTCCTCCACCCAATGCCCA +
Preference number: 4 (lower is better)
Translates to: ARNRFCIEALLLNTALWLCCSKF*SSTQCP
Trigger: TGGGCATTGGGTGGAGGAGCAGAATTTACTACAGCA...TAACCAAAGAGCAGTGTTTAAAAGGAGAGCTTCTATACAAAACCTATTCCTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000368295.8
ENST00000454591.6
ENST00000454859.8
ENST00000474289.6
ENST00000528402.5
ENST00000531967.5
CDS-3UTR GCA 90 bp CCCCAAACTGTTCCTAAAAGATCTCTTTCGTTCTGTAATGCTTCCTCCAAATATCCCAGCTTGGTATTATaGCCATCTCTTTGTGGACGA +
Preference number: 4 (lower is better)
Translates to: PQTVPKRSLSFCNASSKYPSLVL*PSLCGR
Trigger: TCGTCCACAAAGAGATGGGCATAATACCAAGCTGGG...ATATTTGGAGGAAGCATTACAGAACGAAAGAGATCTTTTAGGAACAGTTTGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368295.8
ENST00000479525.6
ENST00000528402.5
CDS-3UTR GCA 90 bp GCCAGGAATAGGTTTTGTATAGAAGCTCTCCTTTTAAACACTGCTCTTTGGTTACCCAGCTTGGTATTATaGCCATCTCTTTGTGGACGA +
Preference number: 4 (lower is better)
Translates to: ARNRFCIEALLLNTALWLPSLVL*PSLCGR
Trigger: TCGTCCACAAAGAGATGGGCATAATACCAAGCTGGG...TAACCAAAGAGCAGTGTTTAAAAGGAGAGCTTCTATACAAAACCTATTCCTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000368295.8
ENST00000454591.6
ENST00000454859.8
ENST00000474289.6
ENST00000528402.5
ENST00000531967.5
CDS-3UTR GCA 90 bp GCCAGGAATAGGTTTTGTATAGAAGCTCTCCTTTTAAACACTGCTCTTTGGTTAGGCCCTTGGATGAATTaGTTTAGCCATTCTTGTGCC +
Preference number: 4 (lower is better)
Translates to: ARNRFCIEALLLNTALWLGPWMN*FSHSCA
Trigger: GGCACAAGAATGGCTAAAGCAATTCATCCAAGGGCC...TAACCAAAGAGCAGTGTTTAAAAGGAGAGCTTCTATACAAAACCTATTCCTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000368295.8
ENST00000454591.6
ENST00000454859.8
ENST00000474289.6
ENST00000528402.5
ENST00000531967.5
CDS-3UTR GCA 90 bp AACCTGAAATCACATGCTGTAGTAAATTCTGCTCCTCCACCCAATGCCCAACCTAATGCAAATTTATGTTaGAGGATGCTTCATGAGTCC +
Preference number: 4 (lower is better)
Translates to: NLKSHAVVNSAPPPNAQPNANLC*RMLHES
Trigger: GGACTCATGAAGCATCCTGCAACATAAATTTGCATT...AGGTTGGGCATTGGGTGGAGGAGCAGAATTTACTACAGCATGTGATTTCAGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368295.8
CDS-3UTR GCA 90 bp CCCCAGCTTGGTATTATGCCCATCTCTTTGTGGACGAATCTGATCTTACTCTCTGCTTCTTTACCTAGGTaGAAAGTCAATTCATATTCC +
Preference number: 4 (lower is better)
Translates to: PQLGIMPISLWTNLILLSASLPR*KVNSYS
Trigger: GGAATATGAATTGACTTTGCACCTAGGTAAAGAAGC...AGAGAGTAAGATCAGATTCGTCCACAAAGAGATGGGCATAATACCAAGCTGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417628.6
CDS-3UTR CCA 90 bp TTTAAGGGCCCCACTCAACACTTTGAGAGCTTGTCTACTTCCGATTATTTCAACATGCCCATCTCTTTGTaGACGAATCTGATCTTACTC +
Preference number: 4 (lower is better)
Translates to: FKGPTQHFESLSTSDYFNMPISL*TNLILL
Trigger: GAGTAAGATCAGATTCGTCCACAAAGAGATGGGCAT...GTTGAAATAATCGGAAGTAGACAAGCTCTCAAAGTGTTGAGTGGGGCCCTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR CCA 90 bp AGAGATTTAGTTTCATCTGAAGACTGCAAGACCTCTTCAACCATTCCTATGTTTGGTGCCACCCCAGCTTaGTATTATGCCCATCTCTTT +
Preference number: 4 (lower is better)
Translates to: RDLVSSEDCKTSSTIPMFGATPA*YYAHLF
Trigger: AAAGAGATGGGCATAATACCAAGCTGGGGTGGCACC...AAACATAGGAATGGTTGAAGAGGTCTTGCAGTCTTCAGATGAAACTAAATCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR CCA 90 bp TTATACATATTAGTCACTGGAGCTTTACTTGGAGTACATCCACACGAAAAACCAGGTGCCACCCCAGCTTaGTATTATGCCCATCTCTTT +
Preference number: 4 (lower is better)
Translates to: LYILVTGALLGVHPHEKPGATPA*YYAHLF
Trigger: AAAGAGATGGGCATAATACCAAGCTGGGGTGGCACC...TGGTTTTTCGTGTGGATGTACTCCAAGTAAAGCTCCAGTGACTAATATGTATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000368291.6
ENST00000368295.8
ENST00000454591.6
ENST00000454859.8
ENST00000474289.6
ENST00000479525.6
ENST00000528402.5
ENST00000531967.5
CDS-3UTR CCA 90 bp GCCACCCCAGCTTGGTATTATGCCCATCTCTTTGTGGACGAATCTGATCTTACTATACATATTAGTCACTaGAGCTTTACTTGGAGTACA +
Preference number: 4 (lower is better)
Translates to: ATPAWYYAHLFVDESDLTIHISH*SFTWST
Trigger: TGTACTCCAAGTAAAGCTCCAGTGACTAATATGTAT...AGTAAGATCAGATTCGTCCACAAAGAGATGGGCATAATACCAAGCTGGGGTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368291.6
ENST00000368295.8
ENST00000479525.6
ENST00000528402.5
CDS-3UTR CCA 90 bp TTATACATATTAGTCACTGGAGCTTTACTTGGAGTACATCCACACGAAAAACCATGCTTCTTCACAGGCTaGCTTCCCTTCCTGGAATGT +
Preference number: 4 (lower is better)
Translates to: LYILVTGALLGVHPHEKPCFFTG*LPFLEC
Trigger: ACATTCCAGGAAGGGAAGCCAGCCTGTGAAGAAGCA...TGGTTTTTCGTGTGGATGTACTCCAAGTAAAGCTCCAGTGACTAATATGTATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531967.5
CDS-3UTR TCA 90 bp ACATTTATACATATTAGTCACTGGAGCTTTACTTGGAGTACATCCACACGAAAACCCCACTCAACACTTTaGGAGCTTGTCTACTTCCGA +
Preference number: 4 (lower is better)
Translates to: TFIHISHWSFTWSTSTRKPHSTL*ELVYFR
Trigger: TCGGAAGTAGACAAGCTCTCAAAGTGTTGAGTGGGG...TTTTCGTGTGGATGTACTCCAAGTAAAGCTCCAGTGACTAATATGTATAAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000368291.6
ENST00000368295.8
ENST00000454591.6
ENST00000454859.8
ENST00000474289.6
ENST00000479525.6
ENST00000528402.5
ENST00000531967.5
CDS-3UTR TCA 90 bp GGTATTATGCCCATCTCTTTGTGGACGAATCTGATCTTACTCTCTGGAGTCATTAGATTTAGTTTCATCTaGAGACTGCAAGACCTCTTC +
Preference number: 4 (lower is better)
Translates to: GIMPISLWTNLILLSGVIRFSFI*RLQDLF
Trigger: GAAGAGGTCTTGCAGTCTTCAGATGAAACTAAATCT...AATGACTCCAGAGAGTAAGATCAGATTCGTCCACAAAGAGATGGGCATAATACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR TCA 90 bp GCAGGATGCTTCATGAGTCCCTTCAAGTGGTTTAAAACTACATCAACAGTAGTTAAGGGCCATTTCCCATaGATTTTACTCCAGCTGTTT +
Preference number: 4 (lower is better)
Translates to: AGCFMSPFKWFKTTSTVVKGHFP*ILLQLF
Trigger: AAACAGCTGGAGTAAAATTCATGGGAAATGGCCCTT...AACTACTGTTGATGTAGTTTTAAACCACTTGAAGGGACTCATGAAGCATCCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368295.8
ENST00000454859.8
ENST00000474289.6
ENST00000531967.5
CDS-3UTR TCA 90 bp GCAGGATGCTTCATGAGTCCCTTCAAGTGGTTTAAAACTACATCAACAGTAGTTTCCAGGGCACACAAATaGATGTCCAATTGTAGAATC +
Preference number: 4 (lower is better)
Translates to: AGCFMSPFKWFKTTSTVVSRAHK*MSNCRI
Trigger: GATTCTACAATTGGACATTCATTTGTGTGCCCTGGA...AACTACTGTTGATGTAGTTTTAAACCACTTGAAGGGACTCATGAAGCATCCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368295.8
ENST00000454859.8
ENST00000474289.6
ENST00000531967.5
CDS-3UTR TCA 90 bp GCCAGGAATAGGTTTTGTATAGAAGCTCTCCTTTTAAACACTGCTCTTTGGTTATTGCAGGATGCTTCATaGGTCCCTTCAAGTGGTTTA +
Preference number: 4 (lower is better)
Translates to: ARNRFCIEALLLNTALWLLQDAS*VPSSGL
Trigger: TAAACCACTTGAAGGGACTCATGAAGCATCCTGCAA...TAACCAAAGAGCAGTGTTTAAAAGGAGAGCTTCTATACAAAACCTATTCCTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368295.8
ENST00000454859.8
ENST00000474289.6
ENST00000531967.5
CDS-3UTR TCA 90 bp AGTTTAAGGGCCCCACTCAACACTTTGAGAGCTTGTCTACTTCCGATTATTTCAAGTAGCAAATACTTTTaGCCTCTTGTGATGAGTCAG +
Preference number: 4 (lower is better)
Translates to: SLRAPLNTLRACLLPIISSSKYF*PLVMSQ
Trigger: CTGACTCATCACAAGAGGTCAAAAGTATTTGCTACT...TGAAATAATCGGAAGTAGACAAGCTCTCAAAGTGTTGAGTGGGGCCCTTAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368295.8
CDS-3UTR TCA 90 bp TTATACATATTAGTCACTGGAGCTTTACTTGGAGTACATCCACACGAAAAACCATGCAGGAATCCCAGCTaGTTATACAGTCGCCTTTCA +
Preference number: 4 (lower is better)
Translates to: LYILVTGALLGVHPHEKPCRNPS*LYSRLS
Trigger: TGAAAGGCGACTGTATAATCAGCTGGGATTCCTGCA...TGGTTTTTCGTGTGGATGTACTCCAAGTAAAGCTCCAGTGACTAATATGTATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531967.5
CDS-3UTR GCA 90 bp ACATTTATACATATTAGTCACTGGAGCTTTACTTGGAGTACATCCACACGAAAACACGCTTTTCCGTTTTaGGTGCCTTTGTTTCCGCTC +
Preference number: 4 (lower is better)
Translates to: TFIHISHWSFTWSTSTRKHAFPF*VPLFPL
Trigger: GAGCGGAAACAAAGGCACGCAAAACGGAAAAGCGTG...TTTTCGTGTGGATGTACTCCAAGTAAAGCTCCAGTGACTAATATGTATAAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000368291.6
ENST00000454591.6
ENST00000454859.8
ENST00000479525.6
ENST00000528402.5
CDS-3UTR GCA 90 bp TTATACATATTAGTCACTGGAGCTTTACTTGGAGTACATCCACACGAAAAACCATGCTGTAGTAAATTCTaGTCCTCCACCCAATGCCCA +
Preference number: 4 (lower is better)
Translates to: LYILVTGALLGVHPHEKPCCSKF*SSTQCP
Trigger: TGGGCATTGGGTGGAGGAGCAGAATTTACTACAGCA...TGGTTTTTCGTGTGGATGTACTCCAAGTAAAGCTCCAGTGACTAATATGTATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000368291.6
ENST00000368295.8
ENST00000454591.6
ENST00000454859.8
ENST00000474289.6
ENST00000479525.6
ENST00000528402.5
ENST00000531967.5
CDS-3UTR GCA 90 bp TTATACATATTAGTCACTGGAGCTTTACTTGGAGTACATCCACACGAAAAACCACCCAGCTTGGTATTATaGCCATCTCTTTGTGGACGA +
Preference number: 4 (lower is better)
Translates to: LYILVTGALLGVHPHEKPPSLVL*PSLCGR
Trigger: TCGTCCACAAAGAGATGGGCATAATACCAAGCTGGG...TGGTTTTTCGTGTGGATGTACTCCAAGTAAAGCTCCAGTGACTAATATGTATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000368291.6
ENST00000368295.8
ENST00000454591.6
ENST00000454859.8
ENST00000474289.6
ENST00000479525.6
ENST00000528402.5
ENST00000531967.5
CDS-3UTR GCA 90 bp AATTTGCAGGCCCACCCCAAACTGTTCCTAAAAGATCTCTTTCGTTCTGTAATGGTTTCATCTGAAGACTaGAAGACCTCTTCAACCATT +
Preference number: 4 (lower is better)
Translates to: NLQAHPKLFLKDLFRSVMVSSED*KTSSTI
Trigger: AATGGTTGAAGAGGTCTTGCAGTCTTCAGATGAAAC...CATTACAGAACGAAAGAGATCTTTTAGGAACAGTTTGGGGTGGGCCTGCAAATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368295.8
ENST00000479525.6
ENST00000528402.5
CDS-3UTR GCA 90 bp GGTATTATGCCCATCTCTTTGTGGACGAATCTGATCTTACTCTCTGGAGTCATTGTTTCATCTGAAGACTaGAAGACCTCTTCAACCATT +
Preference number: 4 (lower is better)
Translates to: GIMPISLWTNLILLSGVIVSSED*KTSSTI
Trigger: AATGGTTGAAGAGGTCTTGCAGTCTTCAGATGAAAC...AATGACTCCAGAGAGTAAGATCAGATTCGTCCACAAAGAGATGGGCATAATACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR GCA 90 bp GAATCCAGTTTAAGGGCCCCACTCAACACTTTGAGAGCTTGTCTACTTCCGATTCCAAATATAGCTCTCTaGCTGAACAAACAGATTTTT +
Preference number: 4 (lower is better)
Translates to: ESSLRAPLNTLRACLLPIPNIAL*LNKQIF
Trigger: AAAAATCTGTTTGTTCAGGCAGAGAGCTATATTTGG...AATCGGAAGTAGACAAGCTCTCAAAGTGTTGAGTGGGGCCCTTAAACTGGATTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR GCA 90 bp CCAGCTTGGTATTATGCCCATCTCTTTGTGGACGAATCTGATCTTACTCTCTGGCCAAATATAGCTCTCTaGCTGAACAAACAGATTTTT +
Preference number: 4 (lower is better)
Translates to: PAWYYAHLFVDESDLTLWPNIAL*LNKQIF
Trigger: AAAAATCTGTTTGTTCAGGCAGAGAGCTATATTTGG...CCAGAGAGTAAGATCAGATTCGTCCACAAAGAGATGGGCATAATACCAAGCTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR GCA 90 bp AAAGATCTCTTTCGTTCTGTAATGCTTCCTCCAAATATAGCTCTCTGCCTGAACCTTGTTAAGGTGTTTTaGATGAACATGCATACGGCC +
Preference number: 4 (lower is better)
Translates to: KDLFRSVMLPPNIALCLNLVKVF*MNMHTA
Trigger: GGCCGTATGCATGTTCATGCAAAACACCTTAACAAG...GTTCAGGCAGAGAGCTATATTTGGAGGAAGCATTACAGAACGAAAGAGATCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417628.6
CDS-3UTR GCA 90 bp AACGCCAGGAATAGGTTTTGTATAGAAGCTCTCCTTTTAAACACTGCTCTTTGGCTTGTTAAGGTGTTTTaGATGAACATGCATACGGCC +
Preference number: 4 (lower is better)
Translates to: NARNRFCIEALLLNTALWLVKVF*MNMHTA
Trigger: GGCCGTATGCATGTTCATGCAAAACACCTTAACAAG...CCAAAGAGCAGTGTTTAAAAGGAGAGCTTCTATACAAAACCTATTCCTGGCGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000454591.6
ENST00000454859.8
ENST00000474289.6
ENST00000531967.5
CDS-3UTR GCA 90 bp TTATACATATTAGTCACTGGAGCTTTACTTGGAGTACATCCACACGAAAAACCACTTGTCCAGTTCCTCTaGATACCTCTAGCACCTAGA +
Preference number: 4 (lower is better)
Translates to: LYILVTGALLGVHPHEKPLVQFL*IPLAPR
Trigger: TCTAGGTGCTAGAGGTATGCAGAGGAACTGGACAAG...TGGTTTTTCGTGTGGATGTACTCCAAGTAAAGCTCCAGTGACTAATATGTATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531967.5
CDS-3UTR CCA 90 bp ACATTTATACATATTAGTCACTGGAGCTTTACTTGGAGTACATCCACACGAAAAGGTGCCACCCCAGCTTaGTATTATGCCCATCTCTTT +
Preference number: 4 (lower is better)
Translates to: TFIHISHWSFTWSTSTRKGATPA*YYAHLF
Trigger: AAAGAGATGGGCATAATACCAAGCTGGGGTGGCACC...TTTTCGTGTGGATGTACTCCAAGTAAAGCTCCAGTGACTAATATGTATAAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000368291.6
ENST00000368295.8
ENST00000454591.6
ENST00000454859.8
ENST00000474289.6
ENST00000479525.6
ENST00000528402.5
ENST00000531967.5
CDS-3UTR CCA 90 bp CTAAATGTTCCAGATTACGCAGTAAATACCCAAGTGAGTAATTGGCAAGAAATGACTTCCGGTGGCCCTTaGATGAATTGCTTTAGCCAT +
Preference number: 4 (lower is better)
Translates to: LNVPDYAVNTQVSNWQEMTSGGP*MNCFSH
Trigger: ATGGCTAAAGCAATTCATCCAAGGGCCACCGGAAGT...CATTTCTTGCCAATTACTCACTTGGGTATTTACTGCGTAATCTGGAACATTTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000368291.6
ENST00000368295.8
ENST00000454591.6
ENST00000454859.8
ENST00000474289.6
ENST00000479525.6
ENST00000528402.5
ENST00000531967.5
CDS-3UTR CCA 90 bp AGAGATTTAGTTTCATCTGAAGACTGCAAGACCTCTTCAACCATTCCTATGTTTACTTCCGGTGGCCCTTaGATGAATTGCTTTAGCCAT +
Preference number: 4 (lower is better)
Translates to: RDLVSSEDCKTSSTIPMFTSGGP*MNCFSH
Trigger: ATGGCTAAAGCAATTCATCCAAGGGCCACCGGAAGT...AAACATAGGAATGGTTGAAGAGGTCTTGCAGTCTTCAGATGAAACTAAATCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR CCA 90 bp AAAGATCTCTTTCGTTCTGTAATGCTTCCTCCAAATATAGCTCTCTGCCTGAACTCTAATTACTTCCGGTaGCCCTTGGATGAATTGCTT +
Preference number: 4 (lower is better)
Translates to: KDLFRSVMLPPNIALCLNSNYFR*PLDELL
Trigger: AAGCAATTCATCCAAGGGCCACCGGAAGTAATTAGA...GTTCAGGCAGAGAGCTATATTTGGAGGAAGCATTACAGAACGAAAGAGATCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR CCA 90 bp TTTTTCAAAGCTCTAATTACTTCCGGTGGCCCTTGGATGAATTGCTTTAGCCATTCTAATTACTTCCGGTaGCCCTTGGATGAATTGCTT +
Preference number: 4 (lower is better)
Translates to: FFKALITSGGPWMNCFSHSNYFR*PLDELL
Trigger: AAGCAATTCATCCAAGGGCCACCGGAAGTAATTAGA...ATGGCTAAAGCAATTCATCCAAGGGCCACCGGAAGTAATTAGAGCTTTGAAAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR CCA 90 bp AACGCCAGGAATAGGTTTTGTATAGAAGCTCTCCTTTTAAACACTGCTCTTTGGTCTAATTACTTCCGGTaGCCCTTGGATGAATTGCTT +
Preference number: 4 (lower is better)
Translates to: NARNRFCIEALLLNTALWSNYFR*PLDELL
Trigger: AAGCAATTCATCCAAGGGCCACCGGAAGTAATTAGA...CCAAAGAGCAGTGTTTAAAAGGAGAGCTTCTATACAAAACCTATTCCTGGCGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000368295.8
ENST00000454591.6
ENST00000454859.8
ENST00000474289.6
ENST00000528402.5
ENST00000531967.5
CDS-3UTR CCA 90 bp TCTCTTTCGTTCTGTAATGCTTCCTCCAAATATAGCTCTCTGCCTGAACAAACACACTGGAGCTTTACTTaGAGTACATCCACACGAAAA +
Preference number: 4 (lower is better)
Translates to: SLSFCNASSKYSSLPEQTHWSFT*STSTRK
Trigger: TTTTCGTGTGGATGTACTCCAAGTAAAGCTCCAGTG...TGTTTGTTCAGGCAGAGAGCTATATTTGGAGGAAGCATTACAGAACGAAAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368291.6
ENST00000368295.8
ENST00000479525.6
ENST00000528402.5
CDS-3UTR CCA 90 bp GAATCCAGTTTAAGGGCCCCACTCAACACTTTGAGAGCTTGTCTACTTCCGATTTTGTTTATTACTAGTTaGAAATTCCAGGGCACACAA +
Preference number: 4 (lower is better)
Translates to: ESSLRAPLNTLRACLLPILFITS*KFQGTQ
Trigger: TTGTGTGCCCTGGAATTTCCAACTAGTAATAAACAA...AATCGGAAGTAGACAAGCTCTCAAAGTGTTGAGTGGGGCCCTTAAACTGGATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368295.8
CDS-3UTR TCA 90 bp ACATTTATACATATTAGTCACTGGAGCTTTACTTGGAGTACATCCACACGAAAACCATTGTCTTCCTTCTaGAGGTCAATGGATCCACCA +
Preference number: 4 (lower is better)
Translates to: TFIHISHWSFTWSTSTRKPLSSF*RSMDPP
Trigger: TGGTGGATCCATTGACCTTCAGAAGGAAGACAATGG...TTTTCGTGTGGATGTACTCCAAGTAAAGCTCCAGTGACTAATATGTATAAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000368291.6
ENST00000368295.8
ENST00000454859.8
ENST00000474289.6
ENST00000479525.6
ENST00000531967.5
CDS-3UTR TCA 90 bp CTAAATGTTCCAGATTACGCAGTAAATACCCAAGTGAGTAATTGGCAAGAAATGCTTTGTGGACGAATCTaGTCTTACTCTCTGGAGTCA +
Preference number: 4 (lower is better)
Translates to: LNVPDYAVNTQVSNWQEMLCGRI*SYSLES
Trigger: TGACTCCAGAGAGTAAGATCAGATTCGTCCACAAAG...CATTTCTTGCCAATTACTCACTTGGGTATTTACTGCGTAATCTGGAACATTTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000368291.6
ENST00000368295.8
ENST00000454591.6
ENST00000454859.8
ENST00000474289.6
ENST00000479525.6
ENST00000528402.5
ENST00000531967.5
CDS-3UTR TCA 90 bp TCTCTTTCGTTCTGTAATGCTTCCTCCAAATATAGCTCTCTGCCTGAACAAACAAGATTTAGTTTCATCTaGAGACTGCAAGACCTCTTC +
Preference number: 4 (lower is better)
Translates to: SLSFCNASSKYSSLPEQTRFSFI*RLQDLF
Trigger: GAAGAGGTCTTGCAGTCTTCAGATGAAACTAAATCT...TGTTTGTTCAGGCAGAGAGCTATATTTGGAGGAAGCATTACAGAACGAAAGAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR TCA 90 bp AAAGATCTCTTTCGTTCTGTAATGCTTCCTCCAAATATAGCTCTCTGCCTGAACAGATTTAGTTTCATCTaGAGACTGCAAGACCTCTTC +
Preference number: 4 (lower is better)
Translates to: KDLFRSVMLPPNIALCLNRFSFI*RLQDLF
Trigger: GAAGAGGTCTTGCAGTCTTCAGATGAAACTAAATCT...GTTCAGGCAGAGAGCTATATTTGGAGGAAGCATTACAGAACGAAAGAGATCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR TCA 90 bp AACGCCAGGAATAGGTTTTGTATAGAAGCTCTCCTTTTAAACACTGCTCTTTGGAGATTTAGTTTCATCTaGAGACTGCAAGACCTCTTC +
Preference number: 4 (lower is better)
Translates to: NARNRFCIEALLLNTALWRFSFI*RLQDLF
Trigger: GAAGAGGTCTTGCAGTCTTCAGATGAAACTAAATCT...CCAAAGAGCAGTGTTTAAAAGGAGAGCTTCTATACAAAACCTATTCCTGGCGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000368295.8
ENST00000454591.6
ENST00000454859.8
ENST00000474289.6
ENST00000528402.5
ENST00000531967.5
CDS-3UTR TCA 90 bp GCCAGGAATAGGTTTTGTATAGAAGCTCTCCTTTTAAACACTGCTCTTTGGTTAAAGGGCCATTTCCCATaGATTTTACTCCAGCTGTTT +
Preference number: 4 (lower is better)
Translates to: ARNRFCIEALLLNTALWLKGHFP*ILLQLF
Trigger: AAACAGCTGGAGTAAAATTCATGGGAAATGGCCCTT...TAACCAAAGAGCAGTGTTTAAAAGGAGAGCTTCTATACAAAACCTATTCCTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000368295.8
ENST00000454591.6
ENST00000454859.8
ENST00000474289.6
ENST00000528402.5
ENST00000531967.5
CDS-3UTR TCA 90 bp GCCAGGAATAGGTTTTGTATAGAAGCTCTCCTTTTAAACACTGCTCTTTGGTTATCCAGGGCACACAAATaGATGTCCAATTGTAGAATC +
Preference number: 4 (lower is better)
Translates to: ARNRFCIEALLLNTALWLSRAHK*MSNCRI
Trigger: GATTCTACAATTGGACATTCATTTGTGTGCCCTGGA...TAACCAAAGAGCAGTGTTTAAAAGGAGAGCTTCTATACAAAACCTATTCCTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368295.8
ENST00000454859.8
ENST00000474289.6
ENST00000531967.5
CDS-3UTR TCA 90 bp TTATACATATTAGTCACTGGAGCTTTACTTGGAGTACATCCACACGAAAAACCATTGCAGGATGCTTCATaGGTCCCTTCAAGTGGTTTA +
Preference number: 4 (lower is better)
Translates to: LYILVTGALLGVHPHEKPLQDAS*VPSSGL
Trigger: TAAACCACTTGAAGGGACTCATGAAGCATCCTGCAA...TGGTTTTTCGTGTGGATGTACTCCAAGTAAAGCTCCAGTGACTAATATGTATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000368295.8
ENST00000454859.8
ENST00000474289.6
ENST00000531967.5
CDS-3UTR TCA 90 bp GCAGGATGCTTCATGAGTCCCTTCAAGTGGTTTAAAACTACATCAACAGTAGTTAGTAGCAAATACTTTTaGCCTCTTGTGATGAGTCAG +
Preference number: 4 (lower is better)
Translates to: AGCFMSPFKWFKTTSTVVSSKYF*PLVMSQ
Trigger: CTGACTCATCACAAGAGGTCAAAAGTATTTGCTACT...AACTACTGTTGATGTAGTTTTAAACCACTTGAAGGGACTCATGAAGCATCCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368295.8
ENST00000454859.8
ENST00000474289.6
ENST00000531967.5
CDS-3UTR GCA 90 bp TGCTTTAGCCATTCTTGTGCCTCTTCTAGAGATTTAGTTTCATCTGAAGACTGCGTTTCATCTGAAGACTaGAAGACCTCTTCAACCATT +
Preference number: 4 (lower is better)
Translates to: CFSHSCASSRDLVSSEDCVSSED*KTSSTI
Trigger: AATGGTTGAAGAGGTCTTGCAGTCTTCAGATGAAAC...GCAGTCTTCAGATGAAACTAAATCTCTAGAAGAGGCACAAGAATGGCTAAAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR GCA 90 bp AACGCCAGGAATAGGTTTTGTATAGAAGCTCTCCTTTTAAACACTGCTCTTTGGGTTTCATCTGAAGACTaGAAGACCTCTTCAACCATT +
Preference number: 4 (lower is better)
Translates to: NARNRFCIEALLLNTALWVSSED*KTSSTI
Trigger: AATGGTTGAAGAGGTCTTGCAGTCTTCAGATGAAAC...CCAAAGAGCAGTGTTTAAAAGGAGAGCTTCTATACAAAACCTATTCCTGGCGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000368295.8
ENST00000454591.6
ENST00000454859.8
ENST00000474289.6
ENST00000528402.5
ENST00000531967.5
CDS-3UTR GCA 90 bp ATATTAGTCACTGGAGCTTTACTTGGAGTACATCCACACGAAAAACCAATTATTGGCCCTTGGATGAATTaGTTTAGCCATTCTTGTGCC +
Preference number: 4 (lower is better)
Translates to: ILVTGALLGVHPHEKPIIGPWMN*FSHSCA
Trigger: GGCACAAGAATGGCTAAAGCAATTCATCCAAGGGCC...AATAATTGGTTTTTCGTGTGGATGTACTCCAAGTAAAGCTCCAGTGACTAATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000368291.6
ENST00000368295.8
ENST00000479525.6
ENST00000528402.5
CDS-3UTR GCA 90 bp AACGCCAGGAATAGGTTTTGTATAGAAGCTCTCCTTTTAAACACTGCTCTTTGGATTTATGTTGCAGGATaGTTCATGAGTCCCTTCAAG +
Preference number: 4 (lower is better)
Translates to: NARNRFCIEALLLNTALWIYVAG*FMSPFK
Trigger: CTTGAAGGGACTCATGAAGCATCCTGCAACATAAAT...CCAAAGAGCAGTGTTTAAAAGGAGAGCTTCTATACAAAACCTATTCCTGGCGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368295.8
ENST00000454859.8
ENST00000474289.6
ENST00000531967.5
CDS-3UTR CCA 90 bp GCCAGGAATAGGTTTTGTATAGAAGCTCTCCTTTTAAACACTGCTCTTTGGTTACACTGGAGCTTTACTTaGAGTACATCCACACGAAAA +
Preference number: 4 (lower is better)
Translates to: ARNRFCIEALLLNTALWLHWSFT*STSTRK
Trigger: TTTTCGTGTGGATGTACTCCAAGTAAAGCTCCAGTG...TAACCAAAGAGCAGTGTTTAAAAGGAGAGCTTCTATACAAAACCTATTCCTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000368295.8
ENST00000454591.6
ENST00000454859.8
ENST00000474289.6
ENST00000528402.5
ENST00000531967.5
CDS-3UTR TCA 90 bp CTGTTCCTAAAAGATCTCTTTCGTTCTGTAATGCTTCCTCCAAATATAGCTCTCAGATTTAGTTTCATCTaGAGACTGCAAGACCTCTTC +
Preference number: 4 (lower is better)
Translates to: LFLKDLFRSVMLPPNIALRFSFI*RLQDLF
Trigger: GAAGAGGTCTTGCAGTCTTCAGATGAAACTAAATCT...GAGAGCTATATTTGGAGGAAGCATTACAGAACGAAAGAGATCTTTTAGGAACAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368295.8
ENST00000479525.6
ENST00000528402.5
CDS-3UTR TCA 90 bp AACGCCAGGAATAGGTTTTGTATAGAAGCTCTCCTTTTAAACACTGCTCTTTGGTGGAGCAGAAGAAAATaGTTGATCATACCCTTTCTT +
Preference number: 4 (lower is better)
Translates to: NARNRFCIEALLLNTALWWSRRK*LIIPFL
Trigger: AAGAAAGGGTATGATCAATCATTTTCTTCTGCTCCA...CCAAAGAGCAGTGTTTAAAAGGAGAGCTTCTATACAAAACCTATTCCTGGCGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000368295.8
ENST00000454591.6
ENST00000454859.8
ENST00000474289.6
ENST00000528402.5
ENST00000531967.5
CDS-3UTR TCA 90 bp CTAAATGTTCCAGATTACGCAGTAAATACCCAAGTGAGTAATTGGCAAGAAATGAAGGGCCATTTCCCATaGATTTTACTCCAGCTGTTT +
Preference number: 4 (lower is better)
Translates to: LNVPDYAVNTQVSNWQEMKGHFP*ILLQLF
Trigger: AAACAGCTGGAGTAAAATTCATGGGAAATGGCCCTT...CATTTCTTGCCAATTACTCACTTGGGTATTTACTGCGTAATCTGGAACATTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000368295.8
ENST00000454591.6
ENST00000454859.8
ENST00000474289.6
ENST00000528402.5
ENST00000531967.5
CDS-3UTR TCA 90 bp TTATACATATTAGTCACTGGAGCTTTACTTGGAGTACATCCACACGAAAAACCAAAGGGCCATTTCCCATaGATTTTACTCCAGCTGTTT +
Preference number: 4 (lower is better)
Translates to: LYILVTGALLGVHPHEKPKGHFP*ILLQLF
Trigger: AAACAGCTGGAGTAAAATTCATGGGAAATGGCCCTT...TGGTTTTTCGTGTGGATGTACTCCAAGTAAAGCTCCAGTGACTAATATGTATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000368295.8
ENST00000454591.6
ENST00000454859.8
ENST00000474289.6
ENST00000528402.5
ENST00000531967.5
CDS-3UTR TCA 90 bp AACGCCAGGAATAGGTTTTGTATAGAAGCTCTCCTTTTAAACACTGCTCTTTGGAATTGTAGAATCAGTTaGCTTTCCATGTCATGGCTA +
Preference number: 4 (lower is better)
Translates to: NARNRFCIEALLLNTALWNCRIS*LSMSWL
Trigger: TAGCCATGACATGGAAAGTCAACTGATTCTACAATT...CCAAAGAGCAGTGTTTAAAAGGAGAGCTTCTATACAAAACCTATTCCTGGCGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368295.8
ENST00000454859.8
ENST00000474289.6
ENST00000531967.5
CDS-3UTR TCA 90 bp ACATTTATACATATTAGTCACTGGAGCTTTACTTGGAGTACATCCACACGAAAATTGCAGGATGCTTCATaGGTCCCTTCAAGTGGTTTA +
Preference number: 4 (lower is better)
Translates to: TFIHISHWSFTWSTSTRKLQDAS*VPSSGL
Trigger: TAAACCACTTGAAGGGACTCATGAAGCATCCTGCAA...TTTTCGTGTGGATGTACTCCAAGTAAAGCTCCAGTGACTAATATGTATAAATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368295.8
ENST00000454859.8
ENST00000474289.6
ENST00000531967.5
CDS-3UTR GCA 90 bp CGTTCTGTAATGCTTCCTCCAAATATAGCTCTCTGCCTGAACAAACAGATTTTTGTTTCATCTGAAGACTaGAAGACCTCTTCAACCATT +
Preference number: 4 (lower is better)
Translates to: RSVMLPPNIALCLNKQIFVSSED*KTSSTI
Trigger: AATGGTTGAAGAGGTCTTGCAGTCTTCAGATGAAAC...AAAAATCTGTTTGTTCAGGCAGAGAGCTATATTTGGAGGAAGCATTACAGAACG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR GCA 90 bp GCCAGGAATAGGTTTTGTATAGAAGCTCTCCTTTTAAACACTGCTCTTTGGTTAGTTTCATCTGAAGACTaGAAGACCTCTTCAACCATT +
Preference number: 4 (lower is better)
Translates to: ARNRFCIEALLLNTALWLVSSED*KTSSTI
Trigger: AATGGTTGAAGAGGTCTTGCAGTCTTCAGATGAAAC...TAACCAAAGAGCAGTGTTTAAAAGGAGAGCTTCTATACAAAACCTATTCCTGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000368295.8
ENST00000454591.6
ENST00000454859.8
ENST00000474289.6
ENST00000528402.5
ENST00000531967.5
CDS-3UTR CCA 90 bp TACATATTAGTCACTGGAGCTTTACTTGGAGTACATCCACACGAAAAACCAATTATGCCCATCTCTTTGTaGACGAATCTGATCTTACTC +
Preference number: 4 (lower is better)
Translates to: YILVTGALLGVHPHEKPIMPISL*TNLILL
Trigger: GAGTAAGATCAGATTCGTCCACAAAGAGATGGGCAT...AATTGGTTTTTCGTGTGGATGTACTCCAAGTAAAGCTCCAGTGACTAATATGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000368291.6
ENST00000368295.8
ENST00000479525.6
ENST00000528402.5
CDS-3UTR CCA 90 bp AGAGATTTAGTTTCATCTGAAGACTGCAAGACCTCTTCAACCATTCCTATGTTTTCTAATTACTTCCGGTaGCCCTTGGATGAATTGCTT +
Preference number: 4 (lower is better)
Translates to: RDLVSSEDCKTSSTIPMFSNYFR*PLDELL
Trigger: AAGCAATTCATCCAAGGGCCACCGGAAGTAATTAGA...AAACATAGGAATGGTTGAAGAGGTCTTGCAGTCTTCAGATGAAACTAAATCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR CCA 90 bp TTATACATATTAGTCACTGGAGCTTTACTTGGAGTACATCCACACGAAAAACCATCTAATTACTTCCGGTaGCCCTTGGATGAATTGCTT +
Preference number: 4 (lower is better)
Translates to: LYILVTGALLGVHPHEKPSNYFR*PLDELL
Trigger: AAGCAATTCATCCAAGGGCCACCGGAAGTAATTAGA...TGGTTTTTCGTGTGGATGTACTCCAAGTAAAGCTCCAGTGACTAATATGTATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000368291.6
ENST00000368295.8
ENST00000454591.6
ENST00000454859.8
ENST00000474289.6
ENST00000479525.6
ENST00000528402.5
ENST00000531967.5
CDS-3UTR CCA 90 bp CTAAATGTTCCAGATTACGCAGTAAATACCCAAGTGAGTAATTGGCAAGAAATGCACTGGAGCTTTACTTaGAGTACATCCACACGAAAA +
Preference number: 4 (lower is better)
Translates to: LNVPDYAVNTQVSNWQEMHWSFT*STSTRK
Trigger: TTTTCGTGTGGATGTACTCCAAGTAAAGCTCCAGTG...CATTTCTTGCCAATTACTCACTTGGGTATTTACTGCGTAATCTGGAACATTTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000368291.6
ENST00000368295.8
ENST00000454591.6
ENST00000454859.8
ENST00000474289.6
ENST00000479525.6
ENST00000528402.5
ENST00000531967.5
CDS-3UTR TCA 90 bp CTAAATGTTCCAGATTACGCAGTAAATACCCAAGTGAGTAATTGGCAAGAAATGAGATTTAGTTTCATCTaGAGACTGCAAGACCTCTTC +
Preference number: 4 (lower is better)
Translates to: LNVPDYAVNTQVSNWQEMRFSFI*RLQDLF
Trigger: GAAGAGGTCTTGCAGTCTTCAGATGAAACTAAATCT...CATTTCTTGCCAATTACTCACTTGGGTATTTACTGCGTAATCTGGAACATTTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000368291.6
ENST00000368295.8
ENST00000454591.6
ENST00000454859.8
ENST00000474289.6
ENST00000479525.6
ENST00000528402.5
ENST00000531967.5
CDS-3UTR TCA 90 bp GCCAGGAATAGGTTTTGTATAGAAGCTCTCCTTTTAAACACTGCTCTTTGGTTATGGAGCAGAAGAAAATaGTTGATCATACCCTTTCTT +
Preference number: 4 (lower is better)
Translates to: ARNRFCIEALLLNTALWLWSRRK*LIIPFL
Trigger: AAGAAAGGGTATGATCAATCATTTTCTTCTGCTCCA...TAACCAAAGAGCAGTGTTTAAAAGGAGAGCTTCTATACAAAACCTATTCCTGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000368295.8
ENST00000454591.6
ENST00000454859.8
ENST00000474289.6
ENST00000528402.5
ENST00000531967.5
CDS-3UTR TCA 90 bp ACATTTATACATATTAGTCACTGGAGCTTTACTTGGAGTACATCCACACGAAAATCCAGGGCACACAAATaGATGTCCAATTGTAGAATC +
Preference number: 4 (lower is better)
Translates to: TFIHISHWSFTWSTSTRKSRAHK*MSNCRI
Trigger: GATTCTACAATTGGACATTCATTTGTGTGCCCTGGA...TTTTCGTGTGGATGTACTCCAAGTAAAGCTCCAGTGACTAATATGTATAAATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368295.8
ENST00000454859.8
ENST00000474289.6
ENST00000531967.5
CDS-3UTR TCA 90 bp TTATACATATTAGTCACTGGAGCTTTACTTGGAGTACATCCACACGAAAAACCAAGTAGCAAATACTTTTaGCCTCTTGTGATGAGTCAG +
Preference number: 4 (lower is better)
Translates to: LYILVTGALLGVHPHEKPSSKYF*PLVMSQ
Trigger: CTGACTCATCACAAGAGGTCAAAAGTATTTGCTACT...TGGTTTTTCGTGTGGATGTACTCCAAGTAAAGCTCCAGTGACTAATATGTATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000368295.8
ENST00000454859.8
ENST00000474289.6
ENST00000531967.5
CDS-3UTR GCA 90 bp AACGCCAGGAATAGGTTTTGTATAGAAGCTCTCCTTTTAAACACTGCTCTTTGGCCAAATATAGCTCTCTaGCTGAACAAACAGATTTTT +
Preference number: 4 (lower is better)
Translates to: NARNRFCIEALLLNTALWPNIAL*LNKQIF
Trigger: AAAAATCTGTTTGTTCAGGCAGAGAGCTATATTTGG...CCAAAGAGCAGTGTTTAAAAGGAGAGCTTCTATACAAAACCTATTCCTGGCGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000368295.8
ENST00000454591.6
ENST00000454859.8
ENST00000474289.6
ENST00000528402.5
ENST00000531967.5
CDS-3UTR GCA 90 bp GCAGGATGCTTCATGAGTCCCTTCAAGTGGTTTAAAACTACATCAACAGTAGTTCCAAATATAGCTCTCTaGCTGAACAAACAGATTTTT +
Preference number: 4 (lower is better)
Translates to: AGCFMSPFKWFKTTSTVVPNIAL*LNKQIF
Trigger: AAAAATCTGTTTGTTCAGGCAGAGAGCTATATTTGG...AACTACTGTTGATGTAGTTTTAAACCACTTGAAGGGACTCATGAAGCATCCTGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368295.8
ENST00000454859.8
ENST00000474289.6
ENST00000531967.5
CDS-3UTR GCA 90 bp TTAGTTTCATCTGAAGACTGCAAGACCTCTTCAACCATTCCTATGTTTAGAGCATTTCGCCATTTCTTCTaGAAAGCTTTCAGGCAAAAA +
Preference number: 4 (lower is better)
Translates to: LVSSEDCKTSSTIPMFRAFRHFF*KAFRQK
Trigger: TTTTTGCCTGAAAGCTTTGCAGAAGAAATGGCGAAA...TGCTCTAAACATAGGAATGGTTGAAGAGGTCTTGCAGTCTTCAGATGAAACTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368289.6
CDS-3UTR GCA 90 bp ACATTTATACATATTAGTCACTGGAGCTTTACTTGGAGTACATCCACACGAAAACTTGTTAAGGTGTTTTaGATGAACATGCATACGGCC +
Preference number: 4 (lower is better)
Translates to: TFIHISHWSFTWSTSTRKLVKVF*MNMHTA
Trigger: GGCCGTATGCATGTTCATGCAAAACACCTTAACAAG...TTTTCGTGTGGATGTACTCCAAGTAAAGCTCCAGTGACTAATATGTATAAATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000454591.6
ENST00000454859.8
ENST00000474289.6
ENST00000531967.5
CDS-3UTR GCA 90 bp CTAAATGTTCCAGATTACGCAGTAAATACCCAAGTGAGTAATTGGCAAGAAATGATTTATGTTGCAGGATaGTTCATGAGTCCCTTCAAG +
Preference number: 4 (lower is better)
Translates to: LNVPDYAVNTQVSNWQEMIYVAG*FMSPFK
Trigger: CTTGAAGGGACTCATGAAGCATCCTGCAACATAAAT...CATTTCTTGCCAATTACTCACTTGGGTATTTACTGCGTAATCTGGAACATTTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368295.8
ENST00000454859.8
ENST00000474289.6
ENST00000531967.5
CDS-3UTR CCA 90 bp ACATTTATACATATTAGTCACTGGAGCTTTACTTGGAGTACATCCACACGAAAATCTAATTACTTCCGGTaGCCCTTGGATGAATTGCTT +
Preference number: 4 (lower is better)
Translates to: TFIHISHWSFTWSTSTRKSNYFR*PLDELL
Trigger: AAGCAATTCATCCAAGGGCCACCGGAAGTAATTAGA...TTTTCGTGTGGATGTACTCCAAGTAAAGCTCCAGTGACTAATATGTATAAATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000368291.6
ENST00000368295.8
ENST00000454591.6
ENST00000454859.8
ENST00000474289.6
ENST00000479525.6
ENST00000528402.5
ENST00000531967.5
CDS-3UTR CCA 90 bp ACATTTATACATATTAGTCACTGGAGCTTTACTTGGAGTACATCCACACGAAAACACTGGAGCTTTACTTaGAGTACATCCACACGAAAA +
Preference number: 4 (lower is better)
Translates to: TFIHISHWSFTWSTSTRKHWSFT*STSTRK
Trigger: TTTTCGTGTGGATGTACTCCAAGTAAAGCTCCAGTG...TTTTCGTGTGGATGTACTCCAAGTAAAGCTCCAGTGACTAATATGTATAAATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000368291.6
ENST00000368295.8
ENST00000454591.6
ENST00000454859.8
ENST00000474289.6
ENST00000479525.6
ENST00000528402.5
ENST00000531967.5
CDS-3UTR CCA 90 bp AGATCTCTTTCGTTCTGTAATGCTTCCTCCAAATATAGCTCTCTGCCTGAACAAATACATATTAGTCACTaGAGCTTTACTTGGAGTACA +
Preference number: 4 (lower is better)
Translates to: RSLSFCNASSKYSSLPEQIHISH*SFTWST
Trigger: TGTACTCCAAGTAAAGCTCCAGTGACTAATATGTAT...TTGTTCAGGCAGAGAGCTATATTTGGAGGAAGCATTACAGAACGAAAGAGATCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368291.6
ENST00000368295.8
ENST00000479525.6
ENST00000528402.5
CDS-3UTR CCA 90 bp GCAGGATGCTTCATGAGTCCCTTCAAGTGGTTTAAAACTACATCAACAGTAGTTATACATATTAGTCACTaGAGCTTTACTTGGAGTACA +
Preference number: 4 (lower is better)
Translates to: AGCFMSPFKWFKTTSTVVIHISH*SFTWST
Trigger: TGTACTCCAAGTAAAGCTCCAGTGACTAATATGTAT...AACTACTGTTGATGTAGTTTTAAACCACTTGAAGGGACTCATGAAGCATCCTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368295.8
ENST00000454859.8
ENST00000474289.6
ENST00000531967.5
CDS-3UTR CCA 90 bp AACGCCAGGAATAGGTTTTGTATAGAAGCTCTCCTTTTAAACACTGCTCTTTGGATACATATTAGTCACTaGAGCTTTACTTGGAGTACA +
Preference number: 4 (lower is better)
Translates to: NARNRFCIEALLLNTALWIHISH*SFTWST
Trigger: TGTACTCCAAGTAAAGCTCCAGTGACTAATATGTAT...CCAAAGAGCAGTGTTTAAAAGGAGAGCTTCTATACAAAACCTATTCCTGGCGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000368295.8
ENST00000454591.6
ENST00000454859.8
ENST00000474289.6
ENST00000528402.5
ENST00000531967.5
CDS-3UTR CCA 90 bp AACGCCAGGAATAGGTTTTGTATAGAAGCTCTCCTTTTAAACACTGCTCTTTGGATGAGTCCCTTCAAGTaGTTTAAAACTACATCAACA +
Preference number: 4 (lower is better)
Translates to: NARNRFCIEALLLNTALWMSPFK*FKTTST
Trigger: TGTTGATGTAGTTTTAAACCACTTGAAGGGACTCAT...CCAAAGAGCAGTGTTTAAAAGGAGAGCTTCTATACAAAACCTATTCCTGGCGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000368295.8
ENST00000454859.8
ENST00000474289.6
ENST00000531967.5
CDS-3UTR TCA 90 bp ACTGTTCCTAAAAGATCTCTTTCGTTCTGTAATGCTTCCTCCAAATATAGCTCTTGGAGCAGAAGAAAATaGTTGATCATACCCTTTCTT +
Preference number: 4 (lower is better)
Translates to: TVPKRSLSFCNASSKYSSWSRRK*LIIPFL
Trigger: AAGAAAGGGTATGATCAATCATTTTCTTCTGCTCCA...AGAGCTATATTTGGAGGAAGCATTACAGAACGAAAGAGATCTTTTAGGAACAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368295.8
ENST00000528402.5
CDS-3UTR TCA 90 bp TTATACATATTAGTCACTGGAGCTTTACTTGGAGTACATCCACACGAAAAACCATGGAGCAGAAGAAAATaGTTGATCATACCCTTTCTT +
Preference number: 4 (lower is better)
Translates to: LYILVTGALLGVHPHEKPWSRRK*LIIPFL
Trigger: AAGAAAGGGTATGATCAATCATTTTCTTCTGCTCCA...TGGTTTTTCGTGTGGATGTACTCCAAGTAAAGCTCCAGTGACTAATATGTATAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000368295.8
ENST00000454591.6
ENST00000454859.8
ENST00000474289.6
ENST00000528402.5
ENST00000531967.5
CDS-3UTR TCA 90 bp CTAAATGTTCCAGATTACGCAGTAAATACCCAAGTGAGTAATTGGCAAGAAATGAATTGTAGAATCAGTTaGCTTTCCATGTCATGGCTA +
Preference number: 4 (lower is better)
Translates to: LNVPDYAVNTQVSNWQEMNCRIS*LSMSWL
Trigger: TAGCCATGACATGGAAAGTCAACTGATTCTACAATT...CATTTCTTGCCAATTACTCACTTGGGTATTTACTGCGTAATCTGGAACATTTAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368295.8
ENST00000454859.8
ENST00000474289.6
ENST00000531967.5
CDS-3UTR GCA 90 bp ACATTTATACATATTAGTCACTGGAGCTTTACTTGGAGTACATCCACACGAAAAGTTTCATCTGAAGACTaGAAGACCTCTTCAACCATT +
Preference number: 4 (lower is better)
Translates to: TFIHISHWSFTWSTSTRKVSSED*KTSSTI
Trigger: AATGGTTGAAGAGGTCTTGCAGTCTTCAGATGAAAC...TTTTCGTGTGGATGTACTCCAAGTAAAGCTCCAGTGACTAATATGTATAAATGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000368291.6
ENST00000368295.8
ENST00000454591.6
ENST00000454859.8
ENST00000474289.6
ENST00000479525.6
ENST00000528402.5
ENST00000531967.5
CDS-3UTR GCA 90 bp GCCAGGAATAGGTTTTGTATAGAAGCTCTCCTTTTAAACACTGCTCTTTGGTTACCAAATATAGCTCTCTaGCTGAACAAACAGATTTTT +
Preference number: 4 (lower is better)
Translates to: ARNRFCIEALLLNTALWLPNIAL*LNKQIF
Trigger: AAAAATCTGTTTGTTCAGGCAGAGAGCTATATTTGG...TAACCAAAGAGCAGTGTTTAAAAGGAGAGCTTCTATACAAAACCTATTCCTGGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000368295.8
ENST00000454591.6
ENST00000454859.8
ENST00000474289.6
ENST00000528402.5
ENST00000531967.5
CDS-3UTR GCA 90 bp TTATACATATTAGTCACTGGAGCTTTACTTGGAGTACATCCACACGAAAAACCAAATGCAAATTTATGTTaGAGGATGCTTCATGAGTCC +
Preference number: 4 (lower is better)
Translates to: LYILVTGALLGVHPHEKPNANLC*RMLHES
Trigger: GGACTCATGAAGCATCCTGCAACATAAATTTGCATT...TGGTTTTTCGTGTGGATGTACTCCAAGTAAAGCTCCAGTGACTAATATGTATAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000368295.8
ENST00000454859.8
ENST00000474289.6
ENST00000531967.5
CDS-3UTR CCA 90 bp GCCAGGAATAGGTTTTGTATAGAAGCTCTCCTTTTAAACACTGCTCTTTGGTTAATACATATTAGTCACTaGAGCTTTACTTGGAGTACA +
Preference number: 4 (lower is better)
Translates to: ARNRFCIEALLLNTALWLIHISH*SFTWST
Trigger: TGTACTCCAAGTAAAGCTCCAGTGACTAATATGTAT...TAACCAAAGAGCAGTGTTTAAAAGGAGAGCTTCTATACAAAACCTATTCCTGGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000368295.8
ENST00000454591.6
ENST00000454859.8
ENST00000474289.6
ENST00000528402.5
ENST00000531967.5
CDS-3UTR CCA 90 bp GCCAGGAATAGGTTTTGTATAGAAGCTCTCCTTTTAAACACTGCTCTTTGGTTATTGTTTATTACTAGTTaGAAATTCCAGGGCACACAA +
Preference number: 4 (lower is better)
Translates to: ARNRFCIEALLLNTALWLLFITS*KFQGTQ
Trigger: TTGTGTGCCCTGGAATTTCCAACTAGTAATAAACAA...TAACCAAAGAGCAGTGTTTAAAAGGAGAGCTTCTATACAAAACCTATTCCTGGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368295.8
ENST00000454859.8
ENST00000474289.6
ENST00000531967.5
CDS-3UTR CCA 90 bp GCCAGGAATAGGTTTTGTATAGAAGCTCTCCTTTTAAACACTGCTCTTTGGTTAATGAGTCCCTTCAAGTaGTTTAAAACTACATCAACA +
Preference number: 4 (lower is better)
Translates to: ARNRFCIEALLLNTALWLMSPFK*FKTTST
Trigger: TGTTGATGTAGTTTTAAACCACTTGAAGGGACTCAT...TAACCAAAGAGCAGTGTTTAAAAGGAGAGCTTCTATACAAAACCTATTCCTGGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000368295.8
ENST00000454859.8
ENST00000474289.6
ENST00000531967.5
CDS-3UTR GCA 90 bp CTAAATGTTCCAGATTACGCAGTAAATACCCAAGTGAGTAATTGGCAAGAAATGCCAAATATAGCTCTCTaGCTGAACAAACAGATTTTT +
Preference number: 4 (lower is better)
Translates to: LNVPDYAVNTQVSNWQEMPNIAL*LNKQIF
Trigger: AAAAATCTGTTTGTTCAGGCAGAGAGCTATATTTGG...CATTTCTTGCCAATTACTCACTTGGGTATTTACTGCGTAATCTGGAACATTTAG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000368291.6
ENST00000368295.8
ENST00000454591.6
ENST00000454859.8
ENST00000474289.6
ENST00000479525.6
ENST00000528402.5
ENST00000531967.5
CDS-3UTR GCA 90 bp ACATTTATACATATTAGTCACTGGAGCTTTACTTGGAGTACATCCACACGAAAAAATGCAAATTTATGTTaGAGGATGCTTCATGAGTCC +
Preference number: 4 (lower is better)
Translates to: TFIHISHWSFTWSTSTRKNANLC*RMLHES
Trigger: GGACTCATGAAGCATCCTGCAACATAAATTTGCATT...TTTTCGTGTGGATGTACTCCAAGTAAAGCTCCAGTGACTAATATGTATAAATGT
36% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000368295.8
ENST00000454859.8
ENST00000474289.6
ENST00000531967.5
CDS-3UTR GCA 90 bp ACATTTATACATATTAGTCACTGGAGCTTTACTTGGAGTACATCCACACGAAAAAAGCAAGCCTCCTCATaGTTTTTAAAGTGTAATCTC +
Preference number: 4 (lower is better)
Translates to: TFIHISHWSFTWSTSTRKKQASS*FLKCNL
Trigger: GAGATTACACTTTAAAAAGCATGAGGAGGCTTGCTT...TTTTCGTGTGGATGTACTCCAAGTAAAGCTCCAGTGACTAATATGTATAAATGT
36% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000474289.6
CDS-3UTR CCA 90 bp CTAAATGTTCCAGATTACGCAGTAAATACCCAAGTGAGTAATTGGCAAGAAATGATACATATTAGTCACTaGAGCTTTACTTGGAGTACA +
Preference number: 4 (lower is better)
Translates to: LNVPDYAVNTQVSNWQEMIHISH*SFTWST
Trigger: TGTACTCCAAGTAAAGCTCCAGTGACTAATATGTAT...CATTTCTTGCCAATTACTCACTTGGGTATTTACTGCGTAATCTGGAACATTTAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000368291.6
ENST00000368295.8
ENST00000454591.6
ENST00000454859.8
ENST00000474289.6
ENST00000479525.6
ENST00000528402.5
ENST00000531967.5
CDS-3UTR CCA 90 bp TTATACATATTAGTCACTGGAGCTTTACTTGGAGTACATCCACACGAAAAACCAATGAGTCCCTTCAAGTaGTTTAAAACTACATCAACA +
Preference number: 4 (lower is better)
Translates to: LYILVTGALLGVHPHEKPMSPFK*FKTTST
Trigger: TGTTGATGTAGTTTTAAACCACTTGAAGGGACTCAT...TGGTTTTTCGTGTGGATGTACTCCAAGTAAAGCTCCAGTGACTAATATGTATAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000368295.8
ENST00000454859.8
ENST00000474289.6
ENST00000531967.5
CDS-3UTR CCA 90 bp ACATTTATACATATTAGTCACTGGAGCTTTACTTGGAGTACATCCACACGAAAATTGTTTATTACTAGTTaGAAATTCCAGGGCACACAA +
Preference number: 4 (lower is better)
Translates to: TFIHISHWSFTWSTSTRKLFITS*KFQGTQ
Trigger: TTGTGTGCCCTGGAATTTCCAACTAGTAATAAACAA...TTTTCGTGTGGATGTACTCCAAGTAAAGCTCCAGTGACTAATATGTATAAATGT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368295.8
ENST00000454859.8
ENST00000474289.6
ENST00000531967.5
CDS-3UTR CCA 90 bp ACATTTATACATATTAGTCACTGGAGCTTTACTTGGAGTACATCCACACGAAAAATGAGTCCCTTCAAGTaGTTTAAAACTACATCAACA +
Preference number: 4 (lower is better)
Translates to: TFIHISHWSFTWSTSTRKMSPFK*FKTTST
Trigger: TGTTGATGTAGTTTTAAACCACTTGAAGGGACTCAT...TTTTCGTGTGGATGTACTCCAAGTAAAGCTCCAGTGACTAATATGTATAAATGT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000368295.8
ENST00000454859.8
ENST00000474289.6
ENST00000531967.5
CDS GCA 90 bp CGTGGCGCTCGGCACCGCGTCTCCACGTCCAGCGCGGGGCAGGCCTaGGCGGCGCTTGCAAGGGACAAGCCGCGGAGCCGGGGAGGCTCG +
Preference number: 5 (lower is better)
Translates to: RGARHRVSTSSAGQA*AALARDKPRSRGGS
Trigger: CGAGCCTCCCCGGCTCCGCGGCTTGTCCCTTGCAAGCGCCGCGCAGGCCTGCCCCGCGCTGGACGTGGAGACGCGGTGCCGAGCGCCACG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474289.6
CDS GCA 90 bp GCACCGCGTCTCCACGTCCAGCGCGGGGCAGGCCTGCGCGGCGCTTaGAAGGGACAAGCCGCGGAGCCGGGGAGGCTCGCCGTCTGGGAC +
Preference number: 5 (lower is better)
Translates to: APRLHVQRGAGLRGA*KGQAAEPGRLAVWD
Trigger: GTCCCAGACGGCGAGCCTCCCCGGCTCCGCGGCTTGTCCCTTGCAAGCGCCGCGCAGGCCTGCCCCGCGCTGGACGTGGAGACGCGGTGC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474289.6
CDS CCA 90 bp GGCGCTTGCAAGGGACAAGCCGCGGAGCCGGGGAGGCTCGCCGTCTaGGACACGTTTGGAGAAGCGAGCGGTACAGTCCATTCCACGGCG +
Preference number: 5 (lower is better)
Translates to: GACKGQAAEPGRLAV*DTFGEASGTVHSTA
Trigger: CGCCGTGGAATGGACTGTACCGCTCGCTTCTCCAAACGTGTCCCAGACGGCGAGCCTCCCCGGCTCCGCGGCTTGTCCCTTGCAAGCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474289.6
CDS TCA 90 bp TTTCCTTTCTCCGGGAACTTTATCCCGTTCCCCTGCCGGTTCCCGTaGCCCCGGAAATCCCGCTCCTGCCGCGAGGCGCCCTCCGCTTCG +
Preference number: 5 (lower is better)
Translates to: FPFSGNFIPFPCRFP*PRKSRSCREAPSAS
Trigger: CGAAGCGGAGGGCGCCTCGCGGCAGGAGCGGGATTTCCGGGGTCACGGGAACCGGCAGGGGAACGGGATAAAGTTCCCGGAGAAAGGAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368291.6
ENST00000454859.8
ENST00000479525.6
CDS CCA 90 bp GGGACAAGCCGCGGAGCCGGGGAGGCTCGCCGTCTGGGACACGTTTaGAGAAGCGAGCGGTACAGTCCATTCCACGGCGACATTTTAGGA +
Preference number: 5 (lower is better)
Translates to: GTSRGAGEARRLGHV*RSERYSPFHGDILG
Trigger: TCCTAAAATGTCGCCGTGGAATGGACTGTACCGCTCGCTTCTCCAAACGTGTCCCAGACGGCGAGCCTCCCCGGCTCCGCGGCTTGTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474289.6
CDS-3UTR CAA 90 bp CAACTAGCCGGGTGGTGCCACCCCAGCTTGGTATTATGCCCATCTCTTTGTGGATGGTGCCACCCCAGCTaGGTATTATGCCCATCTCTT +
Preference number: 5 (lower is better)
Translates to: QLAGWCHPSLVLCPSLCGWCHPS*VLCPSL
Trigger: AAGAGATGGGCATAATACCAAGCTGGGGTGGCACCA...TCCACAAAGAGATGGGCATAATACCAAGCTGGGGTGGCACCACCCGGCTAGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR CAA 90 bp CCGGGTGGTGCCACCCCAGCTTGGTATTATGCCCATCTCTTTGTGGACGAATCTTGGTGCCACCCCAGCTaGGTATTATGCCCATCTCTT +
Preference number: 5 (lower is better)
Translates to: PGGATPAWYYAHLFVDESWCHPS*VLCPSL
Trigger: AAGAGATGGGCATAATACCAAGCTGGGGTGGCACCA...AGATTCGTCCACAAAGAGATGGGCATAATACCAAGCTGGGGTGGCACCACCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR CAA 90 bp GCTTGTCTACTTCCGATTATTTCAACTAGCCGGGTGGTGCCACCCCAGCTTGGTACCCAATGCCCAACCTaGAACCAGCGCAACACTTAT +
Preference number: 5 (lower is better)
Translates to: ACLLPIISTSRVVPPQLGTQCPT*NQRNTY
Trigger: ATAAGTGTTGCGCTGGTTCAAGGTTGGGCATTGGGT...ACCAAGCTGGGGTGGCACCACCCGGCTAGTTGAAATAATCGGAAGTAGACAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR CAA 90 bp CGATTATTTCAACTAGCCGGGTGGTGCCACCCCAGCTTGGTATTATGCCCATCTTGGTGCCACCCCAGCTaGGTATTATGCCCATCTCTT +
Preference number: 5 (lower is better)
Translates to: RLFQLAGWCHPSLVLCPSWCHPS*VLCPSL
Trigger: AAGAGATGGGCATAATACCAAGCTGGGGTGGCACCA...AGATGGGCATAATACCAAGCTGGGGTGGCACCACCCGGCTAGTTGAAATAATCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR CAA 90 bp CGATTATTTCAACTAGCCGGGTGGTGCCACCCCAGCTTGGTATTATGCCCATCTGCCCCACTCAACACTTaGAGAGCTTGTCTACTTCCG +
Preference number: 5 (lower is better)
Translates to: RLFQLAGWCHPSLVLCPSAPLNT*RACLLP
Trigger: CGGAAGTAGACAAGCTCTCAAAGTGTTGAGTGGGGC...AGATGGGCATAATACCAAGCTGGGGTGGCACCACCCGGCTAGTTGAAATAATCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS TCA 90 bp ATTCCACGGCGACATTTTAGGATTCTCCCACTGACAACACTAAACTaGAGCGCTAAGACCAACCCTTACGACCACTTACCGTCGCAGGCC +
Preference number: 5 (lower is better)
Translates to: IPRRHFRILPLTTLN*SAKTNPYDHLPSQA
Trigger: GGCCTGCGACGGTAAGTGGTCGTAAGGGTTGGTCTTAGCGCTTCAGTTTAGTGTTGTCAGTGGGAGAATCCTAAAATGTCGCCGTGGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474289.6
CDS-3UTR CAA 90 bp TTCCGATTATTTCAACTAGCCGGGTGGTGCCACCCCAGCTTGGTATTATGCCCAACCCAATGCCCAACCTaGAACCAGCGCAACACTTAT +
Preference number: 5 (lower is better)
Translates to: FRLFQLAGWCHPSLVLCPTQCPT*NQRNTY
Trigger: ATAAGTGTTGCGCTGGTTCAAGGTTGGGCATTGGGT...TGGGCATAATACCAAGCTGGGGTGGCACCACCCGGCTAGTTGAAATAATCGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR CAA 90 bp CCGATTATTTCAACTAGCCGGGTGGTGCCACCCCAGCTTGGTATTATGCCCATCCCCTTTCTTGTTTTCTaGTTCCCTGATACCTCCCCA +
Preference number: 5 (lower is better)
Translates to: PIISTSRVVPPQLGIMPIPFLVF*FPDTSP
Trigger: TGGGGAGGTATCAGGGAACAAGAAAACAAGAAAGGG...GATGGGCATAATACCAAGCTGGGGTGGCACCACCCGGCTAGTTGAAATAATCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000368295.8
ENST00000528402.5
CDS TCA 90 bp TGCAGGATGTCTTGCAGCCCCACCACAAAGAAGATTCAGTGGAGCTaGACAAGCTCACTACCAAGCCACCTGTTTCAATGCCATGCTTCT +
Preference number: 5 (lower is better)
Translates to: CRMSCSPTTKKIQWS*TSSLPSHLFQCHAS
Trigger: AGAAGCATGGCATTGAAACAGGTGGCTTGGTAGTGAGCTTGTTCAGCTCCACTGAATCTTCTTTGTGGTGGGGCTGCAAGACATCCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531582.1
CDS-3UTR CAA 90 bp TTGAGAGCTTGTCTACTTCCGATTATTTCAACTAGCCGGGTGGTGCCACCCCAGCCCTTTCTTGTTTTCTaGTTCCCTGATACCTCCCCA +
Preference number: 5 (lower is better)
Translates to: LRACLLPIISTSRVVPPQPFLVF*FPDTSP
Trigger: TGGGGAGGTATCAGGGAACAAGAAAACAAGAAAGGG...CTGGGGTGGCACCACCCGGCTAGTTGAAATAATCGGAAGTAGACAAGCTCTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368295.8
ENST00000528402.5
CDS-3UTR CAA 90 bp ACATTTATACATATTAGTCACTGGAGCTTTACTTGGAGTACATCCACACGAAAAAGGCCTGCGCGGCGCTaGCAAGGGACAAGCCGCGGA +
Preference number: 5 (lower is better)
Translates to: TFIHISHWSFTWSTSTRKRPARR*QGTSRG
Trigger: TCCGCGGCTTGTCCCTTGCAAGCGCCGCGCAGGCCT...TTTTCGTGTGGATGTACTCCAAGTAAAGCTCCAGTGACTAATATGTATAAATGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474289.6
CDS CCA 90 bp AGCCGGGTGGTGCCACCCCAGCTTGGTATTATGCCCATCTCTTTGTaGACGAATCTGATCTTACTCTCTGGAGTCATTAACCTTTCTGAT +
Preference number: 5 (lower is better)
Translates to: SRVVPPQLGIMPISL*TNLILLSGVINLSD
Trigger: ATCAGAAAGGTTAATGACTCCAGAGAGTAAGATCAGATTCGTCCACAAAGAGATGGGCATAATACCAAGCTGGGGTGGCACCACCCGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488087.1
CDS-3UTR CAA 90 bp CAACTAGCCGGGTGGTGCCACCCCAGCTTGGTATTATGCCCATCTCTTTGTGGAATTATGCCCATCTCTTaGTGGACGAATCTGATCTTA +
Preference number: 5 (lower is better)
Translates to: QLAGWCHPSLVLCPSLCGIMPIS*WTNLIL
Trigger: TAAGATCAGATTCGTCCACAAAGAGATGGGCATAAT...TCCACAAAGAGATGGGCATAATACCAAGCTGGGGTGGCACCACCCGGCTAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR CAA 90 bp CCAGCTTGGTATTATGCCCATCTCTTTGTGGACGAATCTGATCTTACTCTCTGGGCCCCACTCAACACTTaGAGAGCTTGTCTACTTCCG +
Preference number: 5 (lower is better)
Translates to: PAWYYAHLFVDESDLTLWAPLNT*RACLLP
Trigger: CGGAAGTAGACAAGCTCTCAAAGTGTTGAGTGGGGC...CCAGAGAGTAAGATCAGATTCGTCCACAAAGAGATGGGCATAATACCAAGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR CAA 90 bp GAAATCACATGCTGTAGTAAATTCTGCTCCTCCACCCAATGCCCAACCTTGAACGCCCCACTCAACACTTaGAGAGCTTGTCTACTTCCG +
Preference number: 5 (lower is better)
Translates to: EITCCSKFCSSTQCPTLNAPLNT*RACLLP
Trigger: CGGAAGTAGACAAGCTCTCAAAGTGTTGAGTGGGGC...GTTCAAGGTTGGGCATTGGGTGGAGGAGCAGAATTTACTACAGCATGTGATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
CDS-3UTR CAA 90 bp GCAGGATGCTTCATGAGTCCCTTCAAGTGGTTTAAAACTACATCAACAGTAGTTCCGTCTGGGACACGTTaGGAGAAGCGAGCGGTACAG +
Preference number: 5 (lower is better)
Translates to: AGCFMSPFKWFKTTSTVVPSGTR*EKRAVQ
Trigger: CTGTACCGCTCGCTTCTCCAAACGTGTCCCAGACGG...AACTACTGTTGATGTAGTTTTAAACCACTTGAAGGGACTCATGAAGCATCCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474289.6
CDS TCA 90 bp TCACATGCTGTAGTAAATTCTGCTCCTCCACCCAATGCCCAACCTTaGACCAGCGCAACACTTATTAAAGGAAGTCTCCCTCTGGAGTTC +
Preference number: 5 (lower is better)
Translates to: SHAVVNSAPPPNAQP*TSATLIKGSLPLEF
Trigger: GAACTCCAGAGGGAGACTTCCTTTAATAAGTGTTGCGCTGGTTCAAGGTTGGGCATTGGGTGGAGGAGCAGAATTTACTACAGCATGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479525.6
CDS-3UTR CAA 90 bp TTTGAATCCAGTTTAAGGGCCCCACTCAACACTTTGAGAGCTTGTCTACTTCCGACACGCTTTTCCGTTTaGCGTGCCTTTGTTTCCGCT +
Preference number: 5 (lower is better)
Translates to: FESSLRAPLNTLRACLLPTRFSV*RAFVSA
Trigger: AGCGGAAACAAAGGCACGCAAAACGGAAAAGCGTGT...CGGAAGTAGACAAGCTCTCAAAGTGTTGAGTGGGGCCCTTAAACTGGATTCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368291.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR CAA 90 bp CCACTCAACACTTTGAGAGCTTGTCTACTTCCGATTATTTCAACTAGCCGGGTGACCCAATGCCCAACCTaGAACCAGCGCAACACTTAT +
Preference number: 5 (lower is better)
Translates to: PLNTLRACLLPIISTSRVTQCPT*NQRNTY
Trigger: ATAAGTGTTGCGCTGGTTCAAGGTTGGGCATTGGGT...CACCCGGCTAGTTGAAATAATCGGAAGTAGACAAGCTCTCAAAGTGTTGAGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR CAA 90 bp CCGATTATTTCAACTAGCCGGGTGGTGCCACCCCAGCTTGGTATTATGCCCATCATTATGCCCATCTCTTaGTGGACGAATCTGATCTTA +
Preference number: 5 (lower is better)
Translates to: PIISTSRVVPPQLGIMPIIMPIS*WTNLIL
Trigger: TAAGATCAGATTCGTCCACAAAGAGATGGGCATAAT...GATGGGCATAATACCAAGCTGGGGTGGCACCACCCGGCTAGTTGAAATAATCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR CAA 90 bp GAGCTTGTCTACTTCCGATTATTTCAACTAGCCGGGTGGTGCCACCCCAGCTTGATTATGCCCATCTCTTaGTGGACGAATCTGATCTTA +
Preference number: 5 (lower is better)
Translates to: ELVYFRLFQLAGWCHPSLIMPIS*WTNLIL
Trigger: TAAGATCAGATTCGTCCACAAAGAGATGGGCATAAT...CAAGCTGGGGTGGCACCACCCGGCTAGTTGAAATAATCGGAAGTAGACAAGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR CAA 90 bp TTTCCTTTCTTAGCAATAGCCTCTAAATTTGCAGGCCCACCCCAAACTGTTCCTGCCCCACTCAACACTTaGAGAGCTTGTCTACTTCCG +
Preference number: 5 (lower is better)
Translates to: FPFLAIASKFAGPPQTVPAPLNT*RACLLP
Trigger: CGGAAGTAGACAAGCTCTCAAAGTGTTGAGTGGGGC...AGGAACAGTTTGGGGTGGGCCTGCAAATTTAGAGGCTATTGCTAAGAAAGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368295.8
ENST00000479525.6
ENST00000528402.5
CDS-3UTR CAA 90 bp CTACTTCCGATTATTTCAACTAGCCGGGTGGTGCCACCCCAGCTTGGTATTATGTCACTGGAGCTTTACTaGGAGTACATCCACACGAAA +
Preference number: 5 (lower is better)
Translates to: LLPIISTSRVVPPQLGIMSLELY*EYIHTK
Trigger: TTTCGTGTGGATGTACTCCAAGTAAAGCTCCAGTGA...CATAATACCAAGCTGGGGTGGCACCACCCGGCTAGTTGAAATAATCGGAAGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368291.6
ENST00000368295.8
ENST00000479525.6
ENST00000528402.5
CDS TCA 90 bp TCACATGCTGTAGTAAATTCTGCTCCTCCACCCAATGCCCAACCTTaGACCAGCGCAACACTTATTAAAGGAAGTTTGCCTCTGGAGTTC +
Preference number: 5 (lower is better)
Translates to: SHAVVNSAPPPNAQP*TSATLIKGSLPLEF
Trigger: GAACTCCAGAGGCAAACTTCCTTTAATAAGTGTTGCGCTGGTTCAAGGTTGGGCATTGGGTGGAGGAGCAGAATTTACTACAGCATGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368295.8
CDS GCA 90 bp ATGTATTCCGAAATTAAATCAGCATGTAGAAAGCAAGCCTCCTCATaGTTTTTAAAGTGTAATCTCGCGACCTCGCGGCGCGCTCTGGGA +
Preference number: 5 (lower is better)
Translates to: MYSEIKSACRKQASS*FLKCNLATSRRALG
Trigger: TCCCAGAGCGCGCCGCGAGGTCGCGAGATTACACTTTAAAAAGCATGAGGAGGCTTGCTTTCTACATGCTGATTTAATTTCGGAATACAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000474289.6
CDS-3UTR CAA 90 bp GCTTGGTATTATGCCCATCTCTTTGTGGACGAATCTGATCTTACTCTCTGGAGTACACGCTTTTCCGTTTaGCGTGCCTTTGTTTCCGCT +
Preference number: 5 (lower is better)
Translates to: AWYYAHLFVDESDLTLWSTRFSV*RAFVSA
Trigger: AGCGGAAACAAAGGCACGCAAAACGGAAAAGCGTGT...ACTCCAGAGAGTAAGATCAGATTCGTCCACAAAGAGATGGGCATAATACCAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000368291.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR CAA 90 bp AATTTGCAGGCCCACCCCAAACTGTTCCTAAAAGATCTCTTTCGTTCTGTAATGTGGTGCCACCCCAGCTaGGTATTATGCCCATCTCTT +
Preference number: 5 (lower is better)
Translates to: NLQAHPKLFLKDLFRSVMWCHPS*VLCPSL
Trigger: AAGAGATGGGCATAATACCAAGCTGGGGTGGCACCA...CATTACAGAACGAAAGAGATCTTTTAGGAACAGTTTGGGGTGGGCCTGCAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368295.8
ENST00000479525.6
ENST00000528402.5
CDS-3UTR CAA 90 bp TTAAGGGCCCCACTCAACACTTTGAGAGCTTGTCTACTTCCGATTATTTCAACTGCCCCACTCAACACTTaGAGAGCTTGTCTACTTCCG +
Preference number: 5 (lower is better)
Translates to: LRAPLNTLRACLLPIISTAPLNT*RACLLP
Trigger: CGGAAGTAGACAAGCTCTCAAAGTGTTGAGTGGGGC...AGTTGAAATAATCGGAAGTAGACAAGCTCTCAAAGTGTTGAGTGGGGCCCTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS GCA 90 bp AAGGGGAAACTGGATGCAGGGTGTACAGGAACTCTGTATTCCATCTaGAACTTTCCTCTGGAGTTCCTAGTGATTTCACAGCATTCAGAT +
Preference number: 5 (lower is better)
Translates to: KGKLDAGCTGTLYSI*NFPLEFLVISQHSD
Trigger: ATCTGAATGCTGTGAAATCACTAGGAACTCCAGAGGAAAGTTGCAGATGGAATACAGAGTTCCTGTACACCCTGCATCCAGTTTCCCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000436638.5
ENST00000525745.5
CDS-3UTR CAA 90 bp CTACTTCCGATTATTTCAACTAGCCGGGTGGTGCCACCCCAGCTTGGTATTATGATTATGCCCATCTCTTaGTGGACGAATCTGATCTTA +
Preference number: 5 (lower is better)
Translates to: LLPIISTSRVVPPQLGIMIMPIS*WTNLIL
Trigger: TAAGATCAGATTCGTCCACAAAGAGATGGGCATAAT...CATAATACCAAGCTGGGGTGGCACCACCCGGCTAGTTGAAATAATCGGAAGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR CAA 90 bp TGCTTTAGCCATTCTTGTGCCTCTTCTAGAGATTTAGTTTCATCTGAAGACTGCTGGTGCCACCCCAGCTaGGTATTATGCCCATCTCTT +
Preference number: 5 (lower is better)
Translates to: CFSHSCASSRDLVSSEDCWCHPS*VLCPSL
Trigger: AAGAGATGGGCATAATACCAAGCTGGGGTGGCACCA...GCAGTCTTCAGATGAAACTAAATCTCTAGAAGAGGCACAAGAATGGCTAAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR CAA 90 bp GCAGGATGCTTCATGAGTCCCTTCAAGTGGTTTAAAACTACATCAACAGTAGTTTGGTGCCACCCCAGCTaGGTATTATGCCCATCTCTT +
Preference number: 5 (lower is better)
Translates to: AGCFMSPFKWFKTTSTVVWCHPS*VLCPSL
Trigger: AAGAGATGGGCATAATACCAAGCTGGGGTGGCACCA...AACTACTGTTGATGTAGTTTTAAACCACTTGAAGGGACTCATGAAGCATCCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368295.8
ENST00000454859.8
ENST00000474289.6
ENST00000531967.5
CDS-3UTR CAA 90 bp CCCCAGCTTGGTATTATGCCCATCTCTTTGTGGACGAATCTGATCTTACTCTCTGATACCTCCCCACTTTaGTTCTTTAGCAGCAACACT +
Preference number: 5 (lower is better)
Translates to: PQLGIMPISLWTNLILLSDTSPL*FFSSNT
Trigger: AGTGTTGCTGCTAAAGAACAAAAGTGGGGAGGTATC...AGAGAGTAAGATCAGATTCGTCCACAAAGAGATGGGCATAATACCAAGCTGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368295.8
ENST00000528402.5
CDS-3UTR CAA 90 bp CCAGGTTCAAGCAATCCTTCCACCTCAGACTCCCAAGTTGTAGGACTACAGGCAAAAATGTTCTCAATCTaGATTGTGGAGGTGGTTACA +
Preference number: 5 (lower is better)
Translates to: PGSSNPSTSDSQVVGLQAKMFSI*IVEVVT
Trigger: TGTAACCACCTCCACAATCAAGATTGAGAACATTTT...TGCCTGTAGTCCTACAACTTGGGAGTCTGAGGTGGAAGGATTGCTTGAACCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000461239.2
CDS TCA 90 bp TGCCACCCCAGCTTGGTATTATGCCCATCTCTTTGTGGACGAATCTaGTCTTACTCTCTGGAGTCATTAACCTTTCTGATTTCCAAGTCT +
Preference number: 5 (lower is better)
Translates to: CHPSLVLCPSLCGRI*SYSLESLTFLISKS
Trigger: AGACTTGGAAATCAGAAAGGTTAATGACTCCAGAGAGTAAGATCAGATTCGTCCACAAAGAGATGGGCATAATACCAAGCTGGGGTGGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488087.1
CDS-3UTR CAA 90 bp CATGATGTTTTGAAATATGTAGAGCACTACATGCCAGCGCAGAATCACTTTCTCACCCAATGCCCAACCTaGAACCAGCGCAACACTTAT +
Preference number: 5 (lower is better)
Translates to: HDVLKYVEHYMPAQNHFLTQCPT*NQRNTY
Trigger: ATAAGTGTTGCGCTGGTTCAAGGTTGGGCATTGGGT...GAGAAAGTGATTCTGCGCTGGCATGTAGTGCTCTACATATTTCAAAACATCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000461239.2
CDS-3UTR CAA 90 bp TTTTTCAAAGCTCTAATTACTTCCGGTGGCCCTTGGATGAATTGCTTTAGCCATACCCAATGCCCAACCTaGAACCAGCGCAACACTTAT +
Preference number: 5 (lower is better)
Translates to: FFKALITSGGPWMNCFSHTQCPT*NQRNTY
Trigger: ATAAGTGTTGCGCTGGTTCAAGGTTGGGCATTGGGT...ATGGCTAAAGCAATTCATCCAAGGGCCACCGGAAGTAATTAGAGCTTTGAAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR CAA 90 bp GCCAGGAATAGGTTTTGTATAGAAGCTCTCCTTTTAAACACTGCTCTTTGGTTATGGTGCCACCCCAGCTaGGTATTATGCCCATCTCTT +
Preference number: 5 (lower is better)
Translates to: ARNRFCIEALLLNTALWLWCHPS*VLCPSL
Trigger: AAGAGATGGGCATAATACCAAGCTGGGGTGGCACCA...TAACCAAAGAGCAGTGTTTAAAAGGAGAGCTTCTATACAAAACCTATTCCTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000368295.8
ENST00000454591.6
ENST00000454859.8
ENST00000474289.6
ENST00000528402.5
ENST00000531967.5
CDS-3UTR CAA 90 bp GCCAGGAATAGGTTTTGTATAGAAGCTCTCCTTTTAAACACTGCTCTTTGGTTAGCCCCACTCAACACTTaGAGAGCTTGTCTACTTCCG +
Preference number: 5 (lower is better)
Translates to: ARNRFCIEALLLNTALWLAPLNT*RACLLP
Trigger: CGGAAGTAGACAAGCTCTCAAAGTGTTGAGTGGGGC...TAACCAAAGAGCAGTGTTTAAAAGGAGAGCTTCTATACAAAACCTATTCCTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000368295.8
ENST00000454591.6
ENST00000454859.8
ENST00000474289.6
ENST00000528402.5
ENST00000531967.5
CDS-3UTR CAA 90 bp GCCAGGAATAGGTTTTGTATAGAAGCTCTCCTTTTAAACACTGCTCTTTGGTTAACACGCTTTTCCGTTTaGCGTGCCTTTGTTTCCGCT +
Preference number: 5 (lower is better)
Translates to: ARNRFCIEALLLNTALWLTRFSV*RAFVSA
Trigger: AGCGGAAACAAAGGCACGCAAAACGGAAAAGCGTGT...TAACCAAAGAGCAGTGTTTAAAAGGAGAGCTTCTATACAAAACCTATTCCTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000454591.6
ENST00000454859.8
ENST00000528402.5
CDS-3UTR CAA 90 bp TTATACATATTAGTCACTGGAGCTTTACTTGGAGTACATCCACACGAAAAACCATGGTGCCACCCCAGCTaGGTATTATGCCCATCTCTT +
Preference number: 5 (lower is better)
Translates to: LYILVTGALLGVHPHEKPWCHPS*VLCPSL
Trigger: AAGAGATGGGCATAATACCAAGCTGGGGTGGCACCA...TGGTTTTTCGTGTGGATGTACTCCAAGTAAAGCTCCAGTGACTAATATGTATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000368291.6
ENST00000368295.8
ENST00000454591.6
ENST00000454859.8
ENST00000474289.6
ENST00000479525.6
ENST00000528402.5
ENST00000531967.5
CDS-3UTR CAA 90 bp ACTGTTCCTAAAAGATCTCTTTCGTTCTGTAATGCTTCCTCCAAATATAGCTCTGCCCCACTCAACACTTaGAGAGCTTGTCTACTTCCG +
Preference number: 5 (lower is better)
Translates to: TVPKRSLSFCNASSKYSSAPLNT*RACLLP
Trigger: CGGAAGTAGACAAGCTCTCAAAGTGTTGAGTGGGGC...AGAGCTATATTTGGAGGAAGCATTACAGAACGAAAGAGATCTTTTAGGAACAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368295.8
ENST00000479525.6
ENST00000528402.5
CDS-3UTR CAA 90 bp TTATACATATTAGTCACTGGAGCTTTACTTGGAGTACATCCACACGAAAAACCAGCCCCACTCAACACTTaGAGAGCTTGTCTACTTCCG +
Preference number: 5 (lower is better)
Translates to: LYILVTGALLGVHPHEKPAPLNT*RACLLP
Trigger: CGGAAGTAGACAAGCTCTCAAAGTGTTGAGTGGGGC...TGGTTTTTCGTGTGGATGTACTCCAAGTAAAGCTCCAGTGACTAATATGTATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000368291.6
ENST00000368295.8
ENST00000454591.6
ENST00000454859.8
ENST00000474289.6
ENST00000479525.6
ENST00000528402.5
ENST00000531967.5
CDS-3UTR CAA 90 bp AACGCCAGGAATAGGTTTTGTATAGAAGCTCTCCTTTTAAACACTGCTCTTTGGCCCTTTCTTGTTTTCTaGTTCCCTGATACCTCCCCA +
Preference number: 5 (lower is better)
Translates to: NARNRFCIEALLLNTALWPFLVF*FPDTSP
Trigger: TGGGGAGGTATCAGGGAACAAGAAAACAAGAAAGGG...CCAAAGAGCAGTGTTTAAAAGGAGAGCTTCTATACAAAACCTATTCCTGGCGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000368295.8
ENST00000454591.6
ENST00000454859.8
ENST00000474289.6
ENST00000528402.5
ENST00000531967.5
CDS TCA 90 bp TCACATGCTGTAGTAAATTCTGCTCCTCCACCCAATGCCCAACCTTaGACCAGCGCAACACTTATTAAAGGAAGTCTCATAAATCTTGTT +
Preference number: 5 (lower is better)
Translates to: SHAVVNSAPPPNAQP*TSATLIKGSLINLV
Trigger: AACAAGATTTATGAGACTTCCTTTAATAAGTGTTGCGCTGGTTCAAGGTTGGGCATTGGGTGGAGGAGCAGAATTTACTACAGCATGTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000430841.6
ENST00000454591.6
ENST00000454859.8
ENST00000474289.6
ENST00000531967.5
CDS-3UTR CAA 90 bp CAAACTGTTCCTAAAAGATCTCTTTCGTTCTGTAATGCTTCCTCCAAATATAGCACACGCTTTTCCGTTTaGCGTGCCTTTGTTTCCGCT +
Preference number: 5 (lower is better)
Translates to: QTVPKRSLSFCNASSKYSTRFSV*RAFVSA
Trigger: AGCGGAAACAAAGGCACGCAAAACGGAAAAGCGTGT...GCTATATTTGGAGGAAGCATTACAGAACGAAAGAGATCTTTTAGGAACAGTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368291.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR CAA 90 bp CTAAATGTTCCAGATTACGCAGTAAATACCCAAGTGAGTAATTGGCAAGAAATGACACGCTTTTCCGTTTaGCGTGCCTTTGTTTCCGCT +
Preference number: 5 (lower is better)
Translates to: LNVPDYAVNTQVSNWQEMTRFSV*RAFVSA
Trigger: AGCGGAAACAAAGGCACGCAAAACGGAAAAGCGTGT...CATTTCTTGCCAATTACTCACTTGGGTATTTACTGCGTAATCTGGAACATTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000368291.6
ENST00000454591.6
ENST00000454859.8
ENST00000479525.6
ENST00000528402.5
CDS-3UTR CAA 90 bp CTAAATGTTCCAGATTACGCAGTAAATACCCAAGTGAGTAATTGGCAAGAAATGACCCAATGCCCAACCTaGAACCAGCGCAACACTTAT +
Preference number: 5 (lower is better)
Translates to: LNVPDYAVNTQVSNWQEMTQCPT*NQRNTY
Trigger: ATAAGTGTTGCGCTGGTTCAAGGTTGGGCATTGGGT...CATTTCTTGCCAATTACTCACTTGGGTATTTACTGCGTAATCTGGAACATTTAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000368291.6
ENST00000368295.8
ENST00000454591.6
ENST00000454859.8
ENST00000474289.6
ENST00000479525.6
ENST00000528402.5
ENST00000531967.5
CDS-3UTR CAA 90 bp TTATACATATTAGTCACTGGAGCTTTACTTGGAGTACATCCACACGAAAAACCAACCCAATGCCCAACCTaGAACCAGCGCAACACTTAT +
Preference number: 5 (lower is better)
Translates to: LYILVTGALLGVHPHEKPTQCPT*NQRNTY
Trigger: ATAAGTGTTGCGCTGGTTCAAGGTTGGGCATTGGGT...TGGTTTTTCGTGTGGATGTACTCCAAGTAAAGCTCCAGTGACTAATATGTATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000368291.6
ENST00000368295.8
ENST00000454591.6
ENST00000454859.8
ENST00000474289.6
ENST00000479525.6
ENST00000528402.5
ENST00000531967.5
CDS-3UTR CAA 90 bp AACGCCAGGAATAGGTTTTGTATAGAAGCTCTCCTTTTAAACACTGCTCTTTGGTCACTGGAGCTTTACTaGGAGTACATCCACACGAAA +
Preference number: 5 (lower is better)
Translates to: NARNRFCIEALLLNTALWSLELY*EYIHTK
Trigger: TTTCGTGTGGATGTACTCCAAGTAAAGCTCCAGTGA...CCAAAGAGCAGTGTTTAAAAGGAGAGCTTCTATACAAAACCTATTCCTGGCGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000368295.8
ENST00000454591.6
ENST00000454859.8
ENST00000474289.6
ENST00000528402.5
ENST00000531967.5
CDS-3UTR CAA 90 bp GCAGGATGCTTCATGAGTCCCTTCAAGTGGTTTAAAACTACATCAACAGTAGTTGATACCTCCCCACTTTaGTTCTTTAGCAGCAACACT +
Preference number: 5 (lower is better)
Translates to: AGCFMSPFKWFKTTSTVVDTSPL*FFSSNT
Trigger: AGTGTTGCTGCTAAAGAACAAAAGTGGGGAGGTATC...AACTACTGTTGATGTAGTTTTAAACCACTTGAAGGGACTCATGAAGCATCCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000368295.8
ENST00000454859.8
ENST00000474289.6
ENST00000531967.5
CDS-3UTR CAA 90 bp AACGCCAGGAATAGGTTTTGTATAGAAGCTCTCCTTTTAAACACTGCTCTTTGGGATACCTCCCCACTTTaGTTCTTTAGCAGCAACACT +
Preference number: 5 (lower is better)
Translates to: NARNRFCIEALLLNTALWDTSPL*FFSSNT
Trigger: AGTGTTGCTGCTAAAGAACAAAAGTGGGGAGGTATC...CCAAAGAGCAGTGTTTAAAAGGAGAGCTTCTATACAAAACCTATTCCTGGCGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000368295.8
ENST00000454591.6
ENST00000454859.8
ENST00000474289.6
ENST00000528402.5
ENST00000531967.5
CDS-3UTR CAA 90 bp GCCAGGAATAGGTTTTGTATAGAAGCTCTCCTTTTAAACACTGCTCTTTGGTTACCCTTTCTTGTTTTCTaGTTCCCTGATACCTCCCCA +
Preference number: 5 (lower is better)
Translates to: ARNRFCIEALLLNTALWLPFLVF*FPDTSP
Trigger: TGGGGAGGTATCAGGGAACAAGAAAACAAGAAAGGG...TAACCAAAGAGCAGTGTTTAAAAGGAGAGCTTCTATACAAAACCTATTCCTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000368295.8
ENST00000454591.6
ENST00000454859.8
ENST00000474289.6
ENST00000528402.5
ENST00000531967.5
CDS-3UTR CAA 90 bp ATGAATTGCTTTAGCCATTCTTGTGCCTCTTCTAGAGATTTAGTTTCATCTGAAACCCAATGCCCAACCTaGAACCAGCGCAACACTTAT +
Preference number: 5 (lower is better)
Translates to: MNCFSHSCASSRDLVSSETQCPT*NQRNTY
Trigger: ATAAGTGTTGCGCTGGTTCAAGGTTGGGCATTGGGT...TTCAGATGAAACTAAATCTCTAGAAGAGGCACAAGAATGGCTAAAGCAATTCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000368292.10
ENST00000368295.8
ENST00000417628.6
ENST00000479525.6
ENST00000528402.5
CDS-3UTR CAA 90 bp ACATTTATACATATTAGTCACTGGAGCTTTACTTGGAGTACATCCACACGAAAAACCCAATGCCCAACCTaGAACCAGCGCAACACTTAT +
Preference number: 5 (lower is better)
Translates to: TFIHISHWSFTWSTSTRKTQCPT*NQRNTY
Trigger: ATAAGTGTTGCGCTGGTTCAAGGTTGGGCATTGGGT...TTTTCGTGTGGATGTACTCCAAGTAAAGCTCCAGTGACTAATATGTATAAATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000368291.6
ENST00000368295.8
ENST00000454591.6
ENST00000454859.8
ENST00000474289.6
ENST00000479525.6
ENST00000528402.5
ENST00000531967.5
CDS-3UTR CAA 90 bp TTAGTTTCATCTGAAGACTGCAAGACCTCTTCAACCATTCCTATGTTTAGAGCATCACTGGAGCTTTACTaGGAGTACATCCACACGAAA +
Preference number: 5 (lower is better)
Translates to: LVSSEDCKTSSTIPMFRASLELY*EYIHTK
Trigger: TTTCGTGTGGATGTACTCCAAGTAAAGCTCCAGTGA...TGCTCTAAACATAGGAATGGTTGAAGAGGTCTTGCAGTCTTCAGATGAAACTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000368291.6
ENST00000368295.8
ENST00000479525.6
ENST00000528402.5
CDS-3UTR CAA 90 bp GCCAGGAATAGGTTTTGTATAGAAGCTCTCCTTTTAAACACTGCTCTTTGGTTATCACTGGAGCTTTACTaGGAGTACATCCACACGAAA +
Preference number: 5 (lower is better)
Translates to: ARNRFCIEALLLNTALWLSLELY*EYIHTK
Trigger: TTTCGTGTGGATGTACTCCAAGTAAAGCTCCAGTGA...TAACCAAAGAGCAGTGTTTAAAAGGAGAGCTTCTATACAAAACCTATTCCTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000368295.8
ENST00000454591.6
ENST00000454859.8
ENST00000474289.6
ENST00000528402.5
ENST00000531967.5
CDS-3UTR CAA 90 bp AGATCTCTTTCGTTCTGTAATGCTTCCTCCAAATATAGCTCTCTGCCTGAACAACTTATTAAAGGAAGTTaGCCTCTGGAGTTCCTAGTG +
Preference number: 5 (lower is better)
Translates to: RSLSFCNASSKYSSLPEQLIKGS*PLEFLV
Trigger: CACTAGGAACTCCAGAGGCAAACTTCCTTTAATAAG...TTGTTCAGGCAGAGAGCTATATTTGGAGGAAGCATTACAGAACGAAAGAGATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368295.8
CDS-3UTR CAA 90 bp GCCAGGAATAGGTTTTGTATAGAAGCTCTCCTTTTAAACACTGCTCTTTGGTTAGATACCTCCCCACTTTaGTTCTTTAGCAGCAACACT +
Preference number: 5 (lower is better)
Translates to: ARNRFCIEALLLNTALWLDTSPL*FFSSNT
Trigger: AGTGTTGCTGCTAAAGAACAAAAGTGGGGAGGTATC...TAACCAAAGAGCAGTGTTTAAAAGGAGAGCTTCTATACAAAACCTATTCCTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000368295.8
ENST00000454591.6
ENST00000454859.8
ENST00000474289.6
ENST00000528402.5
ENST00000531967.5
CDS GCA 90 bp TTAAAAAGAAGGCTGCATTACCTCATAAATCTTGTTAAGGTGTTTTaGATGAACATGCATACGGCCATTCCATCCTCTGGAGTTCCTAGT +
Preference number: 5 (lower is better)
Translates to: LKRRLHYLINLVKVF*MNMHTAIPSSGVPS
Trigger: ACTAGGAACTCCAGAGGATGGAATGGCCGTATGCATGTTCATGCAAAACACCTTAACAAGATTTATGAGGTAATGCAGCCTTCTTTTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000474240.1
CDS-3UTR CAA 90 bp GCAGGATGCTTCATGAGTCCCTTCAAGTGGTTTAAAACTACATCAACAGTAGTTATTATGCCCATCTCTTaGTGGACGAATCTGATCTTA +
Preference number: 5 (lower is better)
Translates to: AGCFMSPFKWFKTTSTVVIMPIS*WTNLIL
Trigger: TAAGATCAGATTCGTCCACAAAGAGATGGGCATAAT...AACTACTGTTGATGTAGTTTTAAACCACTTGAAGGGACTCATGAAGCATCCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368295.8
ENST00000454859.8
ENST00000474289.6
ENST00000531967.5
CDS-3UTR CAA 90 bp AACGCCAGGAATAGGTTTTGTATAGAAGCTCTCCTTTTAAACACTGCTCTTTGGATTATGCCCATCTCTTaGTGGACGAATCTGATCTTA +
Preference number: 5 (lower is better)
Translates to: NARNRFCIEALLLNTALWIMPIS*WTNLIL
Trigger: TAAGATCAGATTCGTCCACAAAGAGATGGGCATAAT...CCAAAGAGCAGTGTTTAAAAGGAGAGCTTCTATACAAAACCTATTCCTGGCGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000368295.8
ENST00000454591.6
ENST00000454859.8
ENST00000474289.6
ENST00000528402.5
ENST00000531967.5
CDS-3UTR CAA 90 bp CTAAATGTTCCAGATTACGCAGTAAATACCCAAGTGAGTAATTGGCAAGAAATGTCACTGGAGCTTTACTaGGAGTACATCCACACGAAA +
Preference number: 5 (lower is better)
Translates to: LNVPDYAVNTQVSNWQEMSLELY*EYIHTK
Trigger: TTTCGTGTGGATGTACTCCAAGTAAAGCTCCAGTGA...CATTTCTTGCCAATTACTCACTTGGGTATTTACTGCGTAATCTGGAACATTTAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000368291.6
ENST00000368295.8
ENST00000454591.6
ENST00000454859.8
ENST00000474289.6
ENST00000479525.6
ENST00000528402.5
ENST00000531967.5
CDS-3UTR CAA 90 bp CAAACTGTTCCTAAAAGATCTCTTTCGTTCTGTAATGCTTCCTCCAAATATAGCTCACTGGAGCTTTACTaGGAGTACATCCACACGAAA +
Preference number: 5 (lower is better)
Translates to: QTVPKRSLSFCNASSKYSSLELY*EYIHTK
Trigger: TTTCGTGTGGATGTACTCCAAGTAAAGCTCCAGTGA...GCTATATTTGGAGGAAGCATTACAGAACGAAAGAGATCTTTTAGGAACAGTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000368291.6
ENST00000368295.8
ENST00000479525.6
ENST00000528402.5
CDS-3UTR CAA 90 bp CTAAATGTTCCAGATTACGCAGTAAATACCCAAGTGAGTAATTGGCAAGAAATGGATACCTCCCCACTTTaGTTCTTTAGCAGCAACACT +
Preference number: 5 (lower is better)
Translates to: LNVPDYAVNTQVSNWQEMDTSPL*FFSSNT
Trigger: AGTGTTGCTGCTAAAGAACAAAAGTGGGGAGGTATC...CATTTCTTGCCAATTACTCACTTGGGTATTTACTGCGTAATCTGGAACATTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000368295.8
ENST00000454591.6
ENST00000454859.8
ENST00000474289.6
ENST00000528402.5
ENST00000531967.5
CDS-3UTR CAA 90 bp TTATACATATTAGTCACTGGAGCTTTACTTGGAGTACATCCACACGAAAAACCAGATACCTCCCCACTTTaGTTCTTTAGCAGCAACACT +
Preference number: 5 (lower is better)
Translates to: LYILVTGALLGVHPHEKPDTSPL*FFSSNT
Trigger: AGTGTTGCTGCTAAAGAACAAAAGTGGGGAGGTATC...TGGTTTTTCGTGTGGATGTACTCCAAGTAAAGCTCCAGTGACTAATATGTATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000368295.8
ENST00000454591.6
ENST00000454859.8
ENST00000474289.6
ENST00000528402.5
ENST00000531967.5
CDS-3UTR CAA 90 bp AGCCATTCTTGTGCCTCTTCTAGAGATTTAGTTTCATCTGAAGACTGCAAGACCTTTTACTCCAGCTGTTaGGAGCAGAAGAAAATGATT +
Preference number: 5 (lower is better)
Translates to: SHSCASSRDLVSSEDCKTFYSSC*EQKKMI
Trigger: AATCATTTTCTTCTGCTCCAAACAGCTGGAGTAAAA...GGTCTTGCAGTCTTCAGATGAAACTAAATCTCTAGAAGAGGCACAAGAATGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368295.8
ENST00000528402.5
CDS-3UTR CAA 90 bp GCCAGGAATAGGTTTTGTATAGAAGCTCTCCTTTTAAACACTGCTCTTTGGTTAATTATGCCCATCTCTTaGTGGACGAATCTGATCTTA +
Preference number: 5 (lower is better)
Translates to: ARNRFCIEALLLNTALWLIMPIS*WTNLIL
Trigger: TAAGATCAGATTCGTCCACAAAGAGATGGGCATAAT...TAACCAAAGAGCAGTGTTTAAAAGGAGAGCTTCTATACAAAACCTATTCCTGGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000368295.8
ENST00000454591.6
ENST00000454859.8
ENST00000474289.6
ENST00000528402.5
ENST00000531967.5
CDS-3UTR CAA 90 bp TTAGTCACTGGAGCTTTACTTGGAGTACATCCACACGAAAAACCAATTATTTATTCACTGGAGCTTTACTaGGAGTACATCCACACGAAA +
Preference number: 5 (lower is better)
Translates to: LVTGALLGVHPHEKPIIYSLELY*EYIHTK
Trigger: TTTCGTGTGGATGTACTCCAAGTAAAGCTCCAGTGA...ATAAATAATTGGTTTTTCGTGTGGATGTACTCCAAGTAAAGCTCCAGTGACTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000368291.6
ENST00000368295.8
ENST00000479525.6
ENST00000528402.5
CDS-3UTR CAA 90 bp ACATTTATACATATTAGTCACTGGAGCTTTACTTGGAGTACATCCACACGAAAATCACTGGAGCTTTACTaGGAGTACATCCACACGAAA +
Preference number: 5 (lower is better)
Translates to: TFIHISHWSFTWSTSTRKSLELY*EYIHTK
Trigger: TTTCGTGTGGATGTACTCCAAGTAAAGCTCCAGTGA...TTTTCGTGTGGATGTACTCCAAGTAAAGCTCCAGTGACTAATATGTATAAATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000368291.6
ENST00000368295.8
ENST00000454591.6
ENST00000454859.8
ENST00000474289.6
ENST00000479525.6
ENST00000528402.5
ENST00000531967.5
CDS-3UTR CAA 90 bp GCAGGATGCTTCATGAGTCCCTTCAAGTGGTTTAAAACTACATCAACAGTAGTTTTTTACTCCAGCTGTTaGGAGCAGAAGAAAATGATT +
Preference number: 5 (lower is better)
Translates to: AGCFMSPFKWFKTTSTVVFYSSC*EQKKMI
Trigger: AATCATTTTCTTCTGCTCCAAACAGCTGGAGTAAAA...AACTACTGTTGATGTAGTTTTAAACCACTTGAAGGGACTCATGAAGCATCCTGC
39% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000368295.8
ENST00000454859.8
ENST00000474289.6
ENST00000531967.5
CDS-3UTR CAA 90 bp CTGGAGTTCCTAGTGATTTCACAGCATTCAGATCAGATCCTGAAGAGAAAGTATTACATTATGTTTTCATaGGTCAGCACTGGTATAGAG +
Preference number: 5 (lower is better)
Translates to: LEFLVISQHSDQILKRKYYIMFS*VSTGIE
Trigger: CTCTATACCAGTGCTGACCAATGAAAACATAATGTA...ATACTTTCTCTTCAGGATCTGATCTGAATGCTGTGAAATCACTAGGAACTCCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526299.5
CDS GCA 90 bp TTTTTAAGCTATAGCCATATTGTAACTTACTCCCAAATAAATGGATaGTTTTGTCTAATTTACAGCTCCTGGAACTTCTCAGCAGCTGGC +
Preference number: 5 (lower is better)
Translates to: FLSYSHIVTYSQING*FCLIYSSWNFSAAG
Trigger: GCCAGCTGCTGAGAAGTTCCAGGAGCTGTAAATTAGACAAAAGCATCCATTTATTTGGGAGTAAGTTACAATATGGCTATAGCTTAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000475319.1
CDS-3UTR CAA 90 bp TACATATTAGTCACTGGAGCTTTACTTGGAGTACATCCACACGAAAAACCAATTATTATGCCCATCTCTTaGTGGACGAATCTGATCTTA +
Preference number: 5 (lower is better)
Translates to: YILVTGALLGVHPHEKPIIMPIS*WTNLIL
Trigger: TAAGATCAGATTCGTCCACAAAGAGATGGGCATAAT...AATTGGTTTTTCGTGTGGATGTACTCCAAGTAAAGCTCCAGTGACTAATATGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000368291.6
ENST00000368295.8
ENST00000479525.6
ENST00000528402.5
CDS-3UTR CAA 90 bp TTATACATATTAGTCACTGGAGCTTTACTTGGAGTACATCCACACGAAAAACCAATTATGCCCATCTCTTaGTGGACGAATCTGATCTTA +
Preference number: 5 (lower is better)
Translates to: LYILVTGALLGVHPHEKPIMPIS*WTNLIL
Trigger: TAAGATCAGATTCGTCCACAAAGAGATGGGCATAAT...TGGTTTTTCGTGTGGATGTACTCCAAGTAAAGCTCCAGTGACTAATATGTATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000368291.6
ENST00000368295.8
ENST00000454591.6
ENST00000454859.8
ENST00000474289.6
ENST00000479525.6
ENST00000528402.5
ENST00000531967.5
CDS-3UTR CAA 90 bp GCCAGGAATAGGTTTTGTATAGAAGCTCTCCTTTTAAACACTGCTCTTTGGTTATTTTACTCCAGCTGTTaGGAGCAGAAGAAAATGATT +
Preference number: 5 (lower is better)
Translates to: ARNRFCIEALLLNTALWLFYSSC*EQKKMI
Trigger: AATCATTTTCTTCTGCTCCAAACAGCTGGAGTAAAA...TAACCAAAGAGCAGTGTTTAAAAGGAGAGCTTCTATACAAAACCTATTCCTGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000368295.8
ENST00000454591.6
ENST00000454859.8
ENST00000474289.6
ENST00000528402.5
ENST00000531967.5
CDS-3UTR CAA 90 bp CTAAATGTTCCAGATTACGCAGTAAATACCCAAGTGAGTAATTGGCAAGAAATGTTTTACTCCAGCTGTTaGGAGCAGAAGAAAATGATT +
Preference number: 5 (lower is better)
Translates to: LNVPDYAVNTQVSNWQEMFYSSC*EQKKMI
Trigger: AATCATTTTCTTCTGCTCCAAACAGCTGGAGTAAAA...CATTTCTTGCCAATTACTCACTTGGGTATTTACTGCGTAATCTGGAACATTTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000368295.8
ENST00000454591.6
ENST00000454859.8
ENST00000474289.6
ENST00000528402.5
ENST00000531967.5
CDS-3UTR CAA 90 bp TTATACATATTAGTCACTGGAGCTTTACTTGGAGTACATCCACACGAAAAACCATTTTACTCCAGCTGTTaGGAGCAGAAGAAAATGATT +
Preference number: 5 (lower is better)
Translates to: LYILVTGALLGVHPHEKPFYSSC*EQKKMI
Trigger: AATCATTTTCTTCTGCTCCAAACAGCTGGAGTAAAA...TGGTTTTTCGTGTGGATGTACTCCAAGTAAAGCTCCAGTGACTAATATGTATAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000368295.8
ENST00000454591.6
ENST00000454859.8
ENST00000474289.6
ENST00000528402.5
ENST00000531967.5
CDS GCA 72 bp CTCCACGTCCAGCGCGGGGCAGGCCTGCGCGGCGCTTaGAAGGGACAAGCCGCGGAGCCGGGGAGGCTCGCC +
Preference number: 6 (lower is better)
Translates to: LHVQRGAGLRGA*KGQAAEPGRLA
Trigger: GGCGAGCCTCCCCGGCTCCGCGGCTTGTCCCTTGCAAGCGCCGCGCAGGCCTGCCCCGCGCTGGACGTGGAG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474289.6
CDS GCA 72 bp CGGCACCGCGTCTCCACGTCCAGCGCGGGGCAGGCCTaGGCGGCGCTTGCAAGGGACAAGCCGCGGAGCCGG +
Preference number: 6 (lower is better)
Translates to: RHRVSTSSAGQA*AALARDKPRSR
Trigger: CCGGCTCCGCGGCTTGTCCCTTGCAAGCGCCGCGCAGGCCTGCCCCGCGCTGGACGTGGAGACGCGGTGCCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474289.6
CDS CAA 90 bp GGCACCGCGTCTCCACGTCCAGCGCGGGGCAGGCCTGCGCGGCGCTaGCAAGGGACAAGCCGCGGAGCCGGGGAGGCTCGCCGTCTGGGA +
Preference number: 6 (lower is better)
Translates to: GTASPRPARGRPARR*QGTSRGAGEARRLG
Trigger: TCCCAGACGGCGAGCCTCCCCGGCTCCGCGGCTTGTCCCTTGCAAGCGCCGCGCAGGCCTGCCCCGCGCTGGACGTGGAGACGCGGTGCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474289.6
CDS CAA 72 bp TCTCCACGTCCAGCGCGGGGCAGGCCTGCGCGGCGCTaGCAAGGGACAAGCCGCGGAGCCGGGGAGGCTCGC +
Preference number: 6 (lower is better)
Translates to: SPRPARGRPARR*QGTSRGAGEAR
Trigger: GCGAGCCTCCCCGGCTCCGCGGCTTGTCCCTTGCAAGCGCCGCGCAGGCCTGCCCCGCGCTGGACGTGGAGA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000474289.6
CDS TCA 72 bp TCCGGGAACTTTATCCCGTTCCCCTGCCGGTTCCCGTaGCCCCGGAAATCCCGCTCCTGCCGCGAGGCGCCC +
Preference number: 6 (lower is better)
Translates to: SGNFIPFPCRFP*PRKSRSCREAP
Trigger: GGGCGCCTCGCGGCAGGAGCGGGATTTCCGGGGTCACGGGAACCGGCAGGGGAACGGGATAAAGTTCCCGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000368291.6
ENST00000454859.8
ENST00000479525.6
CDS CCA 72 bp CGCGGAGCCGGGGAGGCTCGCCGTCTGGGACACGTTTaGAGAAGCGAGCGGTACAGTCCATTCCACGGCGAC +
Preference number: 6 (lower is better)
Translates to: RGAGEARRLGHV*RSERYSPFHGD
Trigger: GTCGCCGTGGAATGGACTGTACCGCTCGCTTCTCCAAACGTGTCCCAGACGGCGAGCCTCCCCGGCTCCGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474289.6
CDS CCA 72 bp AAGGGACAAGCCGCGGAGCCGGGGAGGCTCGCCGTCTaGGACACGTTTGGAGAAGCGAGCGGTACAGTCCAT +
Preference number: 6 (lower is better)
Translates to: KGQAAEPGRLAV*DTFGEASGTVH
Trigger: ATGGACTGTACCGCTCGCTTCTCCAAACGTGTCCCAGACGGCGAGCCTCCCCGGCTCCGCGGCTTGTCCCTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474289.6
CDS CAA 72 bp CAGGCAAAAAGCTGGAAAGGGTCCATGCAGGATGTCTaGCAGCCCCACCACAAAGAAGATTCAGTGGAGCTG +
Preference number: 6 (lower is better)
Translates to: QAKSWKGSMQDV*QPHHKEDSVEL
Trigger: CAGCTCCACTGAATCTTCTTTGTGGTGGGGCTGCAAGACATCCTGCATGGACCCTTTCCAGCTTTTTGCCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534442.5
CDS CAA 90 bp ACTAGCCGGGTGGTGCCACCCCAGCTTGGTATTATGCCCATCTCTTaGTGGACGAATCTGATCTTACTCTCTGGAGTCATTAACCTTTCT +
Preference number: 6 (lower is better)
Translates to: TSRVVPPQLGIMPIS*WTNLILLSGVINLS
Trigger: AGAAAGGTTAATGACTCCAGAGAGTAAGATCAGATTCGTCCACAAAGAGATGGGCATAATACCAAGCTGGGGTGGCACCACCCGGCTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488087.1
CDS TCA 72 bp GTAGTAAATTCTGCTCCTCCACCCAATGCCCAACCTTaGACCAGCGCAACACTTATTAAAGGAAGTCTCTGG +
Preference number: 6 (lower is better)
Translates to: VVNSAPPPNAQP*TSATLIKGSLW
Trigger: CCAGAGACTTCCTTTAATAAGTGTTGCGCTGGTTCAAGGTTGGGCATTGGGTGGAGGAGCAGAATTTACTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000368289.6
ENST00000368291.6
ENST00000528402.5
CDS TCA 72 bp GTAGTAAATTCTGCTCCTCCACCCAATGCCCAACCTTaGACCAGCGCAACACTTATTAAAGGAAGTCTCCCT +
Preference number: 6 (lower is better)
Translates to: VVNSAPPPNAQP*TSATLIKGSLP
Trigger: AGGGAGACTTCCTTTAATAAGTGTTGCGCTGGTTCAAGGTTGGGCATTGGGTGGAGGAGCAGAATTTACTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479525.6
CDS TCA 72 bp CGACATTTTAGGATTCTCCCACTGACAACACTAAACTaGAGCGCTAAGACCAACCCTTACGACCACTTACCG +
Preference number: 6 (lower is better)
Translates to: RHFRILPLTTLN*SAKTNPYDHLP
Trigger: CGGTAAGTGGTCGTAAGGGTTGGTCTTAGCGCTTCAGTTTAGTGTTGTCAGTGGGAGAATCCTAAAATGTCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474289.6
CDS TCA 72 bp GTAGTAAATTCTGCTCCTCCACCCAATGCCCAACCTTaGACCAGCGCAACACTTATTAAAGGAAGTTTGCCT +
Preference number: 6 (lower is better)
Translates to: VVNSAPPPNAQP*TSATLIKGSLP
Trigger: AGGCAAACTTCCTTTAATAAGTGTTGCGCTGGTTCAAGGTTGGGCATTGGGTGGAGGAGCAGAATTTACTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368295.8
CDS TCA 72 bp CCTTCCTGGAATGTTAATCATTGCAGGAATCCCAGCTaGTTATACAGTCGCCTTTCAGGCCAGAACCCAATA +
Preference number: 6 (lower is better)
Translates to: PSWNVNHCRNPS*LYSRLSGQNPI
Trigger: TATTGGGTTCTGGCCTGAAAGGCGACTGTATAATCAGCTGGGATTCCTGCAATGATTAACATTCCAGGAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531967.5
CDS GCA 72 bp TCAAAAGACTTTTCGCCATTTCCTGTTTCAATGCCATaGTTCTTCACAGGCTGGCTTCCCTTCCTGGAATGT +
Preference number: 6 (lower is better)
Translates to: SKDFSPFPVSMP*FFTGWLPFLEC
Trigger: ACATTCCAGGAAGGGAAGCCAGCCTGTGAAGAAGCATGGCATTGAAACAGGAAATGGCGAAAAGTCTTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531967.5
CDS TCA 72 bp GTAGTAAATTCTGCTCCTCCACCCAATGCCCAACCTTaGACCAGCGCAACACTTATTAAAGGAAGTCTCATA +
Preference number: 6 (lower is better)
Translates to: VVNSAPPPNAQP*TSATLIKGSLI
Trigger: TATGAGACTTCCTTTAATAAGTGTTGCGCTGGTTCAAGGTTGGGCATTGGGTGGAGGAGCAGAATTTACTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000430841.6
ENST00000454591.6
ENST00000454859.8
ENST00000461239.2
ENST00000474289.6
ENST00000531967.5
CDS TCA 72 bp GTAGTAAATTCTGCTCCTCCACCCAATGCCCAACCTTaGACCAGCGCAACACTTATTAAAGGAAGTCTGTAT +
Preference number: 6 (lower is better)
Translates to: VVNSAPPPNAQP*TSATLIKGSLY
Trigger: ATACAGACTTCCTTTAATAAGTGTTGCGCTGGTTCAAGGTTGGGCATTGGGTGGAGGAGCAGAATTTACTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000475319.1
CDS GCA 72 bp AGGCTGCATTACCTCATAAATCTTGTTAAGGTGTTTTaGATGAACATGCATACGGCCATTCCATCCTCTGGA +
Preference number: 6 (lower is better)
Translates to: RLHYLINLVKVF*MNMHTAIPSSG
Trigger: TCCAGAGGATGGAATGGCCGTATGCATGTTCATGCAAAACACCTTAACAAGATTTATGAGGTAATGCAGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474240.1
CDS GCA 72 bp CCACACATTCTACTCATAAATCTTGTTAAGGTGTTTTaGATGAACATGCATACGGCCATTCCATCCTCTGGA +
Preference number: 6 (lower is better)
Translates to: PHILLINLVKVF*MNMHTAIPSSG
Trigger: TCCAGAGGATGGAATGGCCGTATGCATGTTCATGCAAAACACCTTAACAAGATTTATGAGTAGAATGTGTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000417628.6
CDS GCA 72 bp TTGCTTCTTTACCTCATAAATCTTGTTAAGGTGTTTTaGATGAACATGCATACGGCCATTCCATCCTCTGGA +
Preference number: 6 (lower is better)
Translates to: LLLYLINLVKVF*MNMHTAIPSSG
Trigger: TCCAGAGGATGGAATGGCCGTATGCATGTTCATGCAAAACACCTTAACAAGATTTATGAGGTAAAGAAGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368292.10
CDS GCA 72 bp TTGCTTCTTTACCTCATAAATCTTGTTAAGGTGTTTTaGATGAACATGCATACGGCCATTCCATCCATAGGA +
Preference number: 6 (lower is better)
Translates to: LLLYLINLVKVF*MNMHTAIPSIG
Trigger: TCCTATGGATGGAATGGCCGTATGCATGTTCATGCAAAACACCTTAACAAGATTTATGAGGTAAAGAAGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000436638.5
CDS GCA 72 bp ATTAAAGGAAGTCTCATAAATCTTGTTAAGGTGTTTTaGATGAACATGCATACGGCCATTCCATCCATAGGA +
Preference number: 6 (lower is better)
Translates to: IKGSLINLVKVF*MNMHTAIPSIG
Trigger: TCCTATGGATGGAATGGCCGTATGCATGTTCATGCAAAACACCTTAACAAGATTTATGAGACTTCCTTTAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000525745.5
CDS CCA 72 bp GTCATTAACCTTTCTGATTTCCAAGTCTCAGATGATTaGCTTCATGAGTTTCCATTCATTATATGCAAACAG +
Preference number: 6 (lower is better)
Translates to: VINLSDFQVSDD*LHEFPFIICKQ
Trigger: CTGTTTGCATATAATGAATGGAAACTCATGAAGCCAATCATCTGAGACTTGGAAATCAGAAAGGTTAATGAC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488087.1
CDS TCA 72 bp CATGAGTTTCCATTCATTATATGCAAACAGACTGCTTaGGTAAGAAGGTATATAGTCGAATGTGTGAAAACT +
Preference number: 6 (lower is better)
Translates to: HEFPFIICKQTA*VRRYIVECVKT
Trigger: AGTTTTCACACATTCGACTATATACCTTCTTACTCAAGCAGTCTGTTTGCATATAATGAATGGAAACTCATG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488087.1