RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ECE1 (Homo sapiens)

Ensembl gene IDs: ENSG00000117298

Ensembl transcript IDs: ENST00000264205.10, ENST00000357071.8, ENST00000374893.11, ENST00000415912.6, ENST00000436918.6, ENST00000463334.2, ENST00000470394.1, ENST00000473505.5, ENST00000481130.6, ENST00000526194.5, ENST00000527991.2, ENST00000528294.1, ENST00000531334.1, ENST00000649812.1

Found 1001 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ATGCCCTGTGCCATGGACCTGCCGGCCAGAGCTCCTGGGCTCCCGTaGAGGTTAGCCCTGCAGGCACCGGGGAAATGGGGCTATGGCCTG +
Preference number: 1 (lower is better)
Translates to: MPCAMDLPARAPGLP*RLALQAPGKWGYGL
Trigger: CAGGCCATAGCCCCATTTCCCCGGTGCCTGCAGGGCTAACCTCCACGGGAGCCCAGGAGCTCTGGCCGGCAGGTCCATGGCACAGGGCAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR CCA 90 bp CAGTCTTCCGATGCCCTGTGCCATGGACCTGCCGGCCAGAGCTCCTaGGCTCCCGTGGAGGTTAGCCCTGCAGGCACCGGGGAAATGGGG +
Preference number: 1 (lower is better)
Translates to: QSSDALCHGPAGQSS*APVEVSPAGTGEMG
Trigger: CCCCATTTCCCCGGTGCCTGCAGGGCTAACCTCCACGGGAGCCCAGGAGCTCTGGCCGGCAGGTCCATGGCACAGGGCATCGGAAGACTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR TCA 90 bp CCTGCCTGTGTCCAGGGAGGGGGTCCAAGCCCATGGTGCTGGTGCTaGCACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGTC +
Preference number: 1 (lower is better)
Translates to: PACVQGGGPSPWCWC*HYRTTTLHAEGRRV
Trigger: GACCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATGGGCTTGGACCCCCTCCCTGGACACAGGCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
3UTR TCA 90 bp ACTGCGGGTCACGTTGAGAGCCAACACCATGGGCTCGGTTCCGGCTaGAAACCCGCCAGTGTGAGGAAGCAGGGCCCCGGGTGGCCAAGC +
Preference number: 1 (lower is better)
Translates to: TAGHVESQHHGLGSG*KPASVRKQGPGWPS
Trigger: GCTTGGCCACCCGGGGCCCTGCTTCCTCACACTGGCGGGTTTTCAGCCGGAACCGAGCCCATGGTGTTGGCTCTCAACGTGACCCGCAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
3UTR GCA 90 bp GCTTGGAGGCAGATCCCAAGGTGGCAGGGGTGTCCCTGTGCCGTCTaGTTCCTCTCGGGCAGGAGGATTCCAGCTTCCCGGGTGAGGGGA +
Preference number: 1 (lower is better)
Translates to: AWRQIPRWQGCPCAV*FLSGRRIPASRVRG
Trigger: TCCCCTCACCCGGGAAGCTGGAATCCTCCTGCCCGAGAGGAAGCAGACGGCACAGGGACACCCCTGCCACCTTGGGATCTGCCTCCAAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR GCA 90 bp CACCAGCCCAGCACCCGAATGCCTGCTGAAGGTGGCGCACACGTGTaGCTGGGATGTCCGGCTCTTCACAGGGGATCAGACTGCGGGTCA +
Preference number: 1 (lower is better)
Translates to: HQPSTRMPAEGGAHV*LGCPALHRGSDCGS
Trigger: TGACCCGCAGTCTGATCCCCTGTGAAGAGCCGGACATCCCAGGCACACGTGTGCGCCACCTTCAGCAGGCATTCGGGTGCTGGGCTGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
3UTR CCA 90 bp GGGAGGCAGAGGGGACACCATGGCTGGGAGAAGCCCGCCTCTATGTaGCAAGGGGACTGCGGCTGGCTTCTGCTTCAGCTACTTCTCGGG +
Preference number: 1 (lower is better)
Translates to: GRQRGHHGWEKPASM*QGDCGWLLLQLLLG
Trigger: CCCGAGAAGTAGCTGAAGCAGAAGCCAGCCGCAGTCCCCTTGCCACATAGAGGCGGGCTTCTCCCAGCCATGGTGTCCCCTCTGCCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR GCA 90 bp CAGCCCAGGGTAAGTCCAGCAGTTTTGCAGTCTTCCGATGCCCTGTaGCATGGACCTGCCGGCCAGAGCTCCTGGGCTCCCGTGGAGGTT +
Preference number: 1 (lower is better)
Translates to: QPRVSPAVLQSSDAL*HGPAGQSSWAPVEV
Trigger: AACCTCCACGGGAGCCCAGGAGCTCTGGCCGGCAGGTCCATGGCACAGGGCATCGGAAGACTGCAAAACTGCTGGACTTACCCTGGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR GCA 90 bp TGGACTGCAGCCCAGGGTAAGTCCAGCAGTTTTGCAGTCTTCCGATaGCCTGTGCCATGGACCTGCCGGCCAGAGCTCCTGGGCTCCCGT +
Preference number: 1 (lower is better)
Translates to: WTAAQGKSSSFAVFR*PVPWTCRPELLGSR
Trigger: ACGGGAGCCCAGGAGCTCTGGCCGGCAGGTCCATGGCACAGGGCATCGGAAGACTGCAAAACTGCTGGACTTACCCTGGGCTGCAGTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR CCA 90 bp AGCCCAGCACCCGAATGCCTGCTGAAGGTGGCGCACACGTGTGCCTaGGATGTCCGGCTCTTCACAGGGGATCAGACTGCGGGTCACGTT +
Preference number: 1 (lower is better)
Translates to: SPAPECLLKVAHTCA*DVRLFTGDQTAGHV
Trigger: AACGTGACCCGCAGTCTGATCCCCTGTGAAGAGCCGGACATCCCAGGCACACGTGTGCGCCACCTTCAGCAGGCATTCGGGTGCTGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
3UTR CCA 90 bp ATCCACTCTCGATACCCTGCACCAGCTTGGAGGCAGATCCCAAGGTaGCAGGGGTGTCCCTGTGCCGTCTGCTTCCTCTCGGGCAGGAGG +
Preference number: 1 (lower is better)
Translates to: IHSRYPAPAWRQIPR*QGCPCAVCFLSGRR
Trigger: CCTCCTGCCCGAGAGGAAGCAGACGGCACAGGGACACCCCTGCCACCTTGGGATCTGCCTCCAAGCTGGTGCAGGGTATCGAGAGTGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR TCA 90 bp CTGGGATGTCCGGCTCTTCACAGGGGATCAGACTGCGGGTCACGTTaGGAGCCAACACCATGGGCTCGGTTCCGGCTGAAAACCCGCCAG +
Preference number: 1 (lower is better)
Translates to: LGCPALHRGSDCGSR*EPTPWARFRLKTRQ
Trigger: CTGGCGGGTTTTCAGCCGGAACCGAGCCCATGGTGTTGGCTCTCAACGTGACCCGCAGTCTGATCCCCTGTGAAGAGCCGGACATCCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
3UTR CCA 90 bp CCAGGACCTCCATCTGGAATCCACTCTCGATACCCTGCACCAGCTTaGAGGCAGATCCCAAGGTGGCAGGGGTGTCCCTGTGCCGTCTGC +
Preference number: 1 (lower is better)
Translates to: PGPPSGIHSRYPAPA*RQIPRWQGCPCAVC
Trigger: GCAGACGGCACAGGGACACCCCTGCCACCTTGGGATCTGCCTCCAAGCTGGTGCAGGGTATCGAGAGTGGATTCCAGATGGAGGTCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR TCA 90 bp TGGATGGCAGAGGCCGCTCCAGGTGCTTCCACTTGGTGGCGCCCATaGGTCTGCTACTGGAGAAGCTGTGGTCTCAGGGAGGAGACAGAC +
Preference number: 1 (lower is better)
Translates to: WMAEAAPGASTWWRP*VCYWRSCGLREETD
Trigger: GTCTGTCTCCTCCCTGAGACCACAGCTTCTCCAGTAGCAGACTCATGGGCGCCACCAAGTGGAAGCACCTGGAGCGGCCTCTGCCATCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR GCA 90 bp AATCACACATCCCAGGGGCTGAGGCAGCTGTCTGATTTGGAGACTTaGTCTGTGGCCCAGGGATCCGTGCCTCAGCCCAGCCTCACAGGG +
Preference number: 1 (lower is better)
Translates to: NHTSQGLRQLSDLET*SVAQGSVPQPSLTG
Trigger: CCCTGTGAGGCTGGGCTGAGGCACGGATCCCTGGGCCACAGAGCAAGTCTCCAAATCAGACAGCTGCCTCAGCCCCTGGGATGTGTGATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
3UTR GCA 90 bp GGGAGAAGCCCGCCTCTATGTGGCAAGGGGACTGCGGCTGGCTTCTaGTTCAGCTACTTCTCGGGTTCCTGTCTCCTCTGCAGAGCTACC +
Preference number: 1 (lower is better)
Translates to: GRSPPLCGKGTAAGF*FSYFSGSCLLCRAT
Trigger: GGTAGCTCTGCAGAGGAGACAGGAACCCGAGAAGTAGCTGAAGCAGAAGCCAGCCGCAGTCCCCTTGCCACATAGAGGCGGGCTTCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR GCA 90 bp GGACACCATGGCTGGGAGAAGCCCGCCTCTATGTGGCAAGGGGACTaGGGCTGGCTTCTGCTTCAGCTACTTCTCGGGTTCCTGTCTCCT +
Preference number: 1 (lower is better)
Translates to: GHHGWEKPASMWQGD*GWLLLQLLLGFLSP
Trigger: AGGAGACAGGAACCCGAGAAGTAGCTGAAGCAGAAGCCAGCCGCAGTCCCCTTGCCACATAGAGGCGGGCTTCTCCCAGCCATGGTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR CCA 90 bp GCAGAGCTACCAGGACTGCTGCGTGCTGGGACCAGGACCTCCATCTaGAATCCACTCTCGATACCCTGCACCAGCTTGGAGGCAGATCCC +
Preference number: 1 (lower is better)
Translates to: AELPGLLRAGTRTSI*NPLSIPCTSLEADP
Trigger: GGGATCTGCCTCCAAGCTGGTGCAGGGTATCGAGAGTGGATTCCAGATGGAGGTCCTGGTCCCAGCACGCAGCAGTCCTGGTAGCTCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR CCA 90 bp CATGGCTGGGAGAAGCCCGCCTCTATGTGGCAAGGGGACTGCGGCTaGCTTCTGCTTCAGCTACTTCTCGGGTTCCTGTCTCCTCTGCAG +
Preference number: 1 (lower is better)
Translates to: HGWEKPASMWQGDCG*LLLQLLLGFLSPLQ
Trigger: CTGCAGAGGAGACAGGAACCCGAGAAGTAGCTGAAGCAGAAGCCAGCCGCAGTCCCCTTGCCACATAGAGGCGGGCTTCTCCCAGCCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR CCA 90 bp TCGGGTTCCTGTCTCCTCTGCAGAGCTACCAGGACTGCTGCGTGCTaGGACCAGGACCTCCATCTGGAATCCACTCTCGATACCCTGCAC +
Preference number: 1 (lower is better)
Translates to: SGSCLLCRATRTAAC*DQDLHLESTLDTLH
Trigger: GTGCAGGGTATCGAGAGTGGATTCCAGATGGAGGTCCTGGTCCCAGCACGCAGCAGTCCTGGTAGCTCTGCAGAGGAGACAGGAACCCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR TCA 90 bp AAAGGTGGGACTGAGAGGGGACACTTGTGGCCAGCAGTGTATCTCTaGCACAGTCTCACCCCGCAGGGCTCCTGCAGTCTCGATTCAGGG +
Preference number: 1 (lower is better)
Translates to: KGGTERGHLWPAVYL*HSLTPQGSCSLDSG
Trigger: CCCTGAATCGAGACTGCAGGAGCCCTGCGGGGTGAGACTGTGTCAGAGATACACTGCTGGCCACAAGTGTCCCCTCTCAGTCCCACCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
3UTR GCA 90 bp TTCTCGGGTTCCTGTCTCCTCTGCAGAGCTACCAGGACTGCTGCGTaGTGGGACCAGGACCTCCATCTGGAATCCACTCTCGATACCCTG +
Preference number: 1 (lower is better)
Translates to: FSGSCLLCRATRTAA*WDQDLHLESTLDTL
Trigger: CAGGGTATCGAGAGTGGATTCCAGATGGAGGTCCTGGTCCCAGCACGCAGCAGTCCTGGTAGCTCTGCAGAGGAGACAGGAACCCGAGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR GCA 90 bp CAGCTACTTCTCGGGTTCCTGTCTCCTCTGCAGAGCTACCAGGACTaGTGCGTGCTGGGACCAGGACCTCCATCTGGAATCCACTCTCGA +
Preference number: 1 (lower is better)
Translates to: QLLLGFLSPLQSYQD*CVLGPGPPSGIHSR
Trigger: TCGAGAGTGGATTCCAGATGGAGGTCCTGGTCCCAGCACGCAGCAGTCCTGGTAGCTCTGCAGAGGAGACAGGAACCCGAGAAGTAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR GCA 90 bp CTACTTCTCGGGTTCCTGTCTCCTCTGCAGAGCTACCAGGACTGCTaGGTGCTGGGACCAGGACCTCCATCTGGAATCCACTCTCGATAC +
Preference number: 1 (lower is better)
Translates to: LLLGFLSPLQSYQDC*VLGPGPPSGIHSRY
Trigger: GTATCGAGAGTGGATTCCAGATGGAGGTCCTGGTCCCAGCACGCAGCAGTCCTGGTAGCTCTGCAGAGGAGACAGGAACCCGAGAAGTAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR CCA 90 bp GCAGGGCTCCTGCAGTCTCGATTCAGGGTGCTTGGTGTTCCCAGATaGTGTTTGAGGGTCCTGACCCGACCTCATTCTGCTATAGCCATC +
Preference number: 1 (lower is better)
Translates to: AGLLQSRFRVLGVPR*CLRVLTRPHSAIAI
Trigger: GATGGCTATAGCAGAATGAGGTCGGGTCAGGACCCTCAAACACCATCTGGGAACACCAAGCACCCTGAATCGAGACTGCAGGAGCCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
3UTR GCA 90 bp TGGTGTTCCCAGATGGTGTTTGAGGGTCCTGACCCGACCTCATTCTaGTATAGCCATCAGTCCCCTGCTGTGGCTTTGGGGATCAGAACT +
Preference number: 1 (lower is better)
Translates to: WCSQMVFEGPDPTSF*YSHQSPAVALGIRT
Trigger: AGTTCTGATCCCCAAAGCCACAGCAGGGGACTGATGGCTATAGCAGAATGAGGTCGGGTCAGGACCCTCAAACACCATCTGGGAACACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
3UTR CCA 90 bp CATCTAGCTGCAAGTACTATCTTGATTCAACCCAGGGGCCGACAATaGACTGCAGCCCAGGGTAAGTCCAGCAGTTTTGCAGTCTTCCGA +
Preference number: 1 (lower is better)
Translates to: HLAASTILIQPRGRQ*TAAQGKSSSFAVFR
Trigger: TCGGAAGACTGCAAAACTGCTGGACTTACCCTGGGCTGCAGTCCATTGTCGGCCCCTGGGTTGAATCAAGATAGTACTTGCAGCTAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR GCA 90 bp ATCCCAAGGTGGCAGGGGTGTCCCTGTGCCGTCTGCTTCCTCTCGGGCAGGAGGGTGGAGGGCACGTGCTaGCCCCACCTCCGTCTCGGG +
Preference number: 2 (lower is better)
Translates to: IPRWQGCPCAVCFLSGRRVEGTC*PHLRLG
Trigger: CCCGAGACGGAGGTGGGGGCAGCACGTGCCCTCCAC...CCTCCTGCCCGAGAGGAAGCAGACGGCACAGGGACACCCCTGCCACCTTGGGAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR TCA 90 bp CCGGCAGACCTGAGCCATGAGTGTGGTCTCCATTCCCTCGGGCTGCACCCCCAGGGTGGCCAAGCGGGCTaGGCAATGCCCTGGAGGCTG +
Preference number: 2 (lower is better)
Translates to: PADLSHECGLHSLGLHPQGGQAG*AMPWRL
Trigger: CAGCCTCCAGGGCATTGCTCAGCCCGCTTGGCCACC...CTGGGGGTGCAGCCCGAGGGAATGGAGACCACACTCATGGCTCAGGTCTGCCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR GCA 90 bp GGGGTGTCCCTGTGCCGTCTGCTTCCTCTCGGGCAGGAGGATTCCAGCTTCCCGCCTGTGCCATGGACCTaGCGGCCAGAGCTCCTGGGC +
Preference number: 2 (lower is better)
Translates to: GVSLCRLLPLGQEDSSFPPVPWT*RPELLG
Trigger: GCCCAGGAGCTCTGGCCGGCAGGTCCATGGCACAGG...CGGGAAGCTGGAATCCTCCTGCCCGAGAGGAAGCAGACGGCACAGGGACACCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR GCA 90 bp ATCCCAAGGTGGCAGGGGTGTCCCTGTGCCGTCTGCTTCCTCTCGGGCAGGAGGGCTGTGGAGGGCACGTaGTGCCCCCACCTCCGTCTC +
Preference number: 2 (lower is better)
Translates to: IPRWQGCPCAVCFLSGRRAVEGT*CPHLRL
Trigger: GAGACGGAGGTGGGGGCAGCACGTGCCCTCCACAGC...CCTCCTGCCCGAGAGGAAGCAGACGGCACAGGGACACCCCTGCCACCTTGGGAT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR TCA 90 bp GTCTCCTCTGCAGAGCTACCAGGACTGCTGCGTGCTGGGACCAGGACCTCCATCGGAGGCCTGGGCTGCTaGGGCGGGAAAGCGGTGGCT +
Preference number: 2 (lower is better)
Translates to: VSSAELPGLLRAGTRTSIGGLGC*GGKAVA
Trigger: AGCCACCGCTTTCCCGCCTCAGCAGCCCAGGCCTCC...GATGGAGGTCCTGGTCCCAGCACGCAGCAGTCCTGGTAGCTCTGCAGAGGAGAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR CCA 90 bp CCGGCAGACCTGAGCCATGAGTGTGGTCTCCATTCCCTCGGGCTGCACCCCCAGGCTGTCTCCTTGGGGTaGAGACTGGCGGCTGCAGCC +
Preference number: 2 (lower is better)
Translates to: PADLSHECGLHSLGLHPQAVSLG*RLAAAA
Trigger: GGCTGCAGCCGCCAGTCTCCACCCCAAGGAGACAGC...CTGGGGGTGCAGCCCGAGGGAATGGAGACCACACTCATGGCTCAGGTCTGCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR CCA 90 bp AGGCAGATCCCAAGGTGGCAGGGGTGTCCCTGTGCCGTCTGCTTCCTCTCGGGCGGCTTCCCCACTGGATaGCAGAGGCCGCTCCAGGTG +
Preference number: 2 (lower is better)
Translates to: RQIPRWQGCPCAVCFLSGGFPTG*QRPLQV
Trigger: CACCTGGAGCGGCCTCTGCCATCCAGTGGGGAAGCC...GCCCGAGAGGAAGCAGACGGCACAGGGACACCCCTGCCACCTTGGGATCTGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR CCA 90 bp CCTGCACCAGCTTGGAGGCAGATCCCAAGGTGGCAGGGGTGTCCCTGTGCCGTCGGCTTCCCCACTGGATaGCAGAGGCCGCTCCAGGTG +
Preference number: 2 (lower is better)
Translates to: PAPAWRQIPRWQGCPCAVGFPTG*QRPLQV
Trigger: CACCTGGAGCGGCCTCTGCCATCCAGTGGGGAAGCC...GACGGCACAGGGACACCCCTGCCACCTTGGGATCTGCCTCCAAGCTGGTGCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR TCA 90 bp CACGTGTGCCTGGGATGTCCGGCTCTTCACAGGGGATCAGACTGCGGGTCACGTGGTGGCCAAGCGGGCTaGGCAATGCCCTGGAGGCTG +
Preference number: 2 (lower is better)
Translates to: HVCLGCPALHRGSDCGSRGGQAG*AMPWRL
Trigger: CAGCCTCCAGGGCATTGCTCAGCCCGCTTGGCCACC...ACGTGACCCGCAGTCTGATCCCCTGTGAAGAGCCGGACATCCCAGGCACACGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR TCA 90 bp CCCGAATGCCTGCTGAAGGTGGCGCACACGTGTGCCTGGGATGTCCGGCTCTTCGGGCTCGGTTCCGGCTaGAAACCCGCCAGTGTGAGG +
Preference number: 2 (lower is better)
Translates to: PECLLKVAHTCAWDVRLFGLGSG*KPASVR
Trigger: CCTCACACTGGCGGGTTTTCAGCCGGAACCGAGCCC...GAAGAGCCGGACATCCCAGGCACACGTGTGCGCCACCTTCAGCAGGCATTCGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR GCA 90 bp GGGGTGTCCCTGTGCCGTCTGCTTCCTCTCGGGCAGGAGGATTCCAGCTTCCCGACCCCGCAGGGCTCCTaGAGTCTCGATTCAGGGTGC +
Preference number: 2 (lower is better)
Translates to: GVSLCRLLPLGQEDSSFPTPQGS*SLDSGC
Trigger: GCACCCTGAATCGAGACTGCAGGAGCCCTGCGGGGT...CGGGAAGCTGGAATCCTCCTGCCCGAGAGGAAGCAGACGGCACAGGGACACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR GCA 90 bp CCGGCAGACCTGAGCCATGAGTGTGGTCTCCATTCCCTCGGGCTGCACCCCCAGACCTGGGGGCTGCACTaGGGAGGCCAAGGGCATCTA +
Preference number: 2 (lower is better)
Translates to: PADLSHECGLHSLGLHPQTWGLH*GGQGHL
Trigger: TAGATGCCCTTGGCCTCCGCAGTGCAGCCCCCAGGT...CTGGGGGTGCAGCCCGAGGGAATGGAGACCACACTCATGGCTCAGGTCTGCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR GCA 90 bp GGGGTGTCCCTGTGCCGTCTGCTTCCTCTCGGGCAGGAGGATTCCAGCTTCCCGACCTGGGGGCTGCACTaGGGAGGCCAAGGGCATCTA +
Preference number: 2 (lower is better)
Translates to: GVSLCRLLPLGQEDSSFPTWGLH*GGQGHL
Trigger: TAGATGCCCTTGGCCTCCGCAGTGCAGCCCCCAGGT...CGGGAAGCTGGAATCCTCCTGCCCGAGAGGAAGCAGACGGCACAGGGACACCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR CCA 90 bp GGGGTGTCCCTGTGCCGTCTGCTTCCTCTCGGGCAGGAGGATTCCAGCTTCCCGTGGCGCTTGTCAGTGTaGGGCCCAGGCCTGATGAGC +
Preference number: 2 (lower is better)
Translates to: GVSLCRLLPLGQEDSSFPWRLSV*GPGLMS
Trigger: GCTCATCAGGCCTGGGCCCCACACTGACAAGCGCCA...CGGGAAGCTGGAATCCTCCTGCCCGAGAGGAAGCAGACGGCACAGGGACACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR CCA 90 bp CCGGCAGACCTGAGCCATGAGTGTGGTCTCCATTCCCTCGGGCTGCACCCCCAGTGGCGCTTGTCAGTGTaGGGCCCAGGCCTGATGAGC +
Preference number: 2 (lower is better)
Translates to: PADLSHECGLHSLGLHPQWRLSV*GPGLMS
Trigger: GCTCATCAGGCCTGGGCCCCACACTGACAAGCGCCA...CTGGGGGTGCAGCCCGAGGGAATGGAGACCACACTCATGGCTCAGGTCTGCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR CCA 90 bp GCTCCTGGGCTCCCGTGGAGGTTAGCCCTGCAGGCACCGGGGAAATGGGGCTATCCTGGGGAAGAGGGTTaGCCGGACAGACCCTGGTGT +
Preference number: 2 (lower is better)
Translates to: APGLPWRLALQAPGKWGYPGEEG*PDRPWC
Trigger: ACACCAGGGTCTGTCCGGCCAACCCTCTTCCCCAGG...ATAGCCCCATTTCCCCGGTGCCTGCAGGGCTAACCTCCACGGGAGCCCAGGAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR CCA 90 bp CTGCACCAGCTTGGAGGCAGATCCCAAGGTGGCAGGGGTGTCCCTGTGCCGTCTGCCTGGCTTCCCCACTaGATGGCAGAGGCCGCTCCA +
Preference number: 2 (lower is better)
Translates to: LHQLGGRSQGGRGVPVPSAWLPH*MAEAAP
Trigger: TGGAGCGGCCTCTGCCATCCAGTGGGGAAGCCAGGC...AGACGGCACAGGGACACCCCTGCCACCTTGGGATCTGCCTCCAAGCTGGTGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR TCA 90 bp CCGGCAGACCTGAGCCATGAGTGTGGTCTCCATTCCCTCGGGCTGCACCCCCAGCCGAAAAGGTGGGACTaGGAGGGGACACTTGTGGCC +
Preference number: 2 (lower is better)
Translates to: PADLSHECGLHSLGLHPQPKRWD*EGTLVA
Trigger: GGCCACAAGTGTCCCCTCTCAGTCCCACCTTTTCGG...CTGGGGGTGCAGCCCGAGGGAATGGAGACCACACTCATGGCTCAGGTCTGCCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR GCA 90 bp CTAGGGCTCCCACTGTTGGACTCAGGGGACGGAGGCAGGCTAGCTGAAGGGGCAAGCCCAGCACCCGAATaGCTGCTGAAGGTGGCGCAC +
Preference number: 2 (lower is better)
Translates to: LGLPLLDSGDGGRLAEGASPAPE*LLKVAH
Trigger: GTGCGCCACCTTCAGCAGGCATTCGGGTGCTGGGCT...TGCCCCTTCAGCTAGCCTGCCTCCGTCCCCTGAGTCCAACAGTGGGAGCCCTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR CCA 90 bp CCGGCAGACCTGAGCCATGAGTGTGGTCTCCATTCCCTCGGGCTGCACCCCCAGCAATGCCCTGGAGGCTaGATGGGGGTCTCGTCCTCA +
Preference number: 2 (lower is better)
Translates to: PADLSHECGLHSLGLHPQQCPGG*MGVSSS
Trigger: TGAGGACGAGACCCCCATCCAGCCTCCAGGGCATTG...CTGGGGGTGCAGCCCGAGGGAATGGAGACCACACTCATGGCTCAGGTCTGCCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR CCA 90 bp CACGTGTGCCTGGGATGTCCGGCTCTTCACAGGGGATCAGACTGCGGGTCACGTAAGCAGGGCCCCGGGTaGCCAAGCGGGCTGAGCAAT +
Preference number: 2 (lower is better)
Translates to: HVCLGCPALHRGSDCGSRKQGPG*PSGLSN
Trigger: ATTGCTCAGCCCGCTTGGCCACCCGGGGCCCTGCTT...ACGTGACCCGCAGTCTGATCCCCTGTGAAGAGCCGGACATCCCAGGCACACGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR CCA 90 bp CAGCTAGGGCTCCCACTGTTGGACTCAGGGGACGGAGGCAGGCTAGCTGAAGGGTGGCGCTTGTCAGTGTaGGGCCCAGGCCTGATGAGC +
Preference number: 2 (lower is better)
Translates to: QLGLPLLDSGDGGRLAEGWRLSV*GPGLMS
Trigger: GCTCATCAGGCCTGGGCCCCACACTGACAAGCGCCA...CCCTTCAGCTAGCCTGCCTCCGTCCCCTGAGTCCAACAGTGGGAGCCCTAGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR CCA 90 bp ATCCCAAGGTGGCAGGGGTGTCCCTGTGCCGTCTGCTTCCTCTCGGGCAGGAGGGCTCCTCTCTCTGCCTaGCCTCCACACCTCTACTGG +
Preference number: 2 (lower is better)
Translates to: IPRWQGCPCAVCFLSGRRAPLSA*PPHLYW
Trigger: CCAGTAGAGGTGTGGAGGCCAGGCAGAGAGAGGAGC...CCTCCTGCCCGAGAGGAAGCAGACGGCACAGGGACACCCCTGCCACCTTGGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR CCA 90 bp ATCCCAAGGTGGCAGGGGTGTCCCTGTGCCGTCTGCTTCCTCTCGGGCAGGAGGACTAGAGGACTGGACTaGTCCTGGGAGCCAGGCCCA +
Preference number: 2 (lower is better)
Translates to: IPRWQGCPCAVCFLSGRRTRGLD*SWEPGP
Trigger: TGGGCCTGGCTCCCAGGACCAGTCCAGTCCTCTAGT...CCTCCTGCCCGAGAGGAAGCAGACGGCACAGGGACACCCCTGCCACCTTGGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR CCA 90 bp CCGGCAGACCTGAGCCATGAGTGTGGTCTCCATTCCCTCGGGCTGCACCCCCAGCCTTGGGGTGGAGACTaGCGGCTGCAGCCTCAGATA +
Preference number: 2 (lower is better)
Translates to: PADLSHECGLHSLGLHPQPWGGD*RLQPQI
Trigger: TATCTGAGGCTGCAGCCGCCAGTCTCCACCCCAAGG...CTGGGGGTGCAGCCCGAGGGAATGGAGACCACACTCATGGCTCAGGTCTGCCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR CAA 90 bp CCAGGGGCCGACAATGGACTGCAGCCCAGGGTAAGTCCAGCAGTTTaGCAGTCTTCCGATGCCCTGTGCCATGGACCTGCCGGCCAGAGC +
Preference number: 2 (lower is better)
Translates to: PGADNGLQPRVSPAV*QSSDALCHGPAGQS
Trigger: GCTCTGGCCGGCAGGTCCATGGCACAGGGCATCGGAAGACTGCAAAACTGCTGGACTTACCCTGGGCTGCAGTCCATTGTCGGCCCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR TCA 90 bp CTGGCCTCCACACCTCTACTGGTCTCCACGCCCTTGCATGAGGTGACAGGAGCTGAAAACCCGCCAGTGTaGGGAAGCAGGGCCCCGGGT +
Preference number: 2 (lower is better)
Translates to: LASTPLLVSTPLHEVTGAENPPV*GSRAPG
Trigger: ACCCGGGGCCCTGCTTCCTCACACTGGCGGGTTTTC...AGCTCCTGTCACCTCATGCAAGGGCGTGGAGACCAGTAGAGGTGTGGAGGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR TCA 90 bp GCCAGCAGTGTATCTCTGACACAGTCTCACCCCGCAGGGCTCCTGCAGTCTCGAGGGCTCGGTTCCGGCTaGAAACCCGCCAGTGTGAGG +
Preference number: 2 (lower is better)
Translates to: ASSVSLTQSHPAGLLQSRGLGSG*KPASVR
Trigger: CCTCACACTGGCGGGTTTTCAGCCGGAACCGAGCCC...TCGAGACTGCAGGAGCCCTGCGGGGTGAGACTGTGTCAGAGATACACTGCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR TCA 90 bp GGGGTGTCCCTGTGCCGTCTGCTTCCTCTCGGGCAGGAGGATTCCAGCTTCCCGACACATCCCAGGGGCTaGGGCAGCTGTCTGATTTGG +
Preference number: 2 (lower is better)
Translates to: GVSLCRLLPLGQEDSSFPTHPRG*GSCLIW
Trigger: CCAAATCAGACAGCTGCCTCAGCCCCTGGGATGTGT...CGGGAAGCTGGAATCCTCCTGCCCGAGAGGAAGCAGACGGCACAGGGACACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR TCA 90 bp GCCAGCAGTGTATCTCTGACACAGTCTCACCCCGCAGGGCTCCTGCAGTCTCGACGGAGGCAGGCTAGCTaGAGGGGCAGTGCCCATGAG +
Preference number: 2 (lower is better)
Translates to: ASSVSLTQSHPAGLLQSRRRQAS*RGSAHE
Trigger: CTCATGGGCACTGCCCCTTCAGCTAGCCTGCCTCCG...TCGAGACTGCAGGAGCCCTGCGGGGTGAGACTGTGTCAGAGATACACTGCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR TCA 90 bp ATCCCAAGGTGGCAGGGGTGTCCCTGTGCCGTCTGCTTCCTCTCGGGCAGGAGGACTTGGTGGCGCCCATaGGTCTGCTACTGGAGAAGC +
Preference number: 2 (lower is better)
Translates to: IPRWQGCPCAVCFLSGRRTWWRP*VCYWRS
Trigger: GCTTCTCCAGTAGCAGACTCATGGGCGCCACCAAGT...CCTCCTGCCCGAGAGGAAGCAGACGGCACAGGGACACCCCTGCCACCTTGGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR TCA 90 bp GTCTCCTCTGCAGAGCTACCAGGACTGCTGCGTGCTGGGACCAGGACCTCCATCTTCCAGCTTCCCGGGTaGGGGGAGAGCACTGTCCAG +
Preference number: 2 (lower is better)
Translates to: VSSAELPGLLRAGTRTSIFQLPG*GESTVQ
Trigger: CTGGACAGTGCTCTCCCCTCACCCGGGAAGCTGGAA...GATGGAGGTCCTGGTCCCAGCACGCAGCAGTCCTGGTAGCTCTGCAGAGGAGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR GCA 90 bp CGATACCCTGCACCAGCTTGGAGGCAGATCCCAAGGTGGCAGGGGTGTCCCTGTGGTGGCGCACACGTGTaGCTGGGATGTCCGGCTCTT +
Preference number: 2 (lower is better)
Translates to: RYPAPAWRQIPRWQGCPCGGAHV*LGCPAL
Trigger: AAGAGCCGGACATCCCAGGCACACGTGTGCGCCACC...ACAGGGACACCCCTGCCACCTTGGGATCTGCCTCCAAGCTGGTGCAGGGTATCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR GCA 90 bp GTCTCCTCTGCAGAGCTACCAGGACTGCTGCGTGCTGGGACCAGGACCTCCATCGCTGGGATGGGGGACTaGTGCAGAGAGGTAACGGGC +
Preference number: 2 (lower is better)
Translates to: VSSAELPGLLRAGTRTSIAGMGD*CREVTG
Trigger: GCCCGTTACCTCTCTGCAGCAGTCCCCCATCCCAGC...GATGGAGGTCCTGGTCCCAGCACGCAGCAGTCCTGGTAGCTCTGCAGAGGAGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR GCA 90 bp CGATACCCTGCACCAGCTTGGAGGCAGATCCCAAGGTGGCAGGGGTGTCCCTGTTCTTCCGATGCCCTGTaGCATGGACCTGCCGGCCAG +
Preference number: 2 (lower is better)
Translates to: RYPAPAWRQIPRWQGCPCSSDAL*HGPAGQ
Trigger: CTGGCCGGCAGGTCCATGGCACAGGGCATCGGAAGA...ACAGGGACACCCCTGCCACCTTGGGATCTGCCTCCAAGCTGGTGCAGGGTATCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR CCA 90 bp CAGCTAGGGCTCCCACTGTTGGACTCAGGGGACGGAGGCAGGCTAGCTGAAGGGCAATGCCCTGGAGGCTaGATGGGGGTCTCGTCCTCA +
Preference number: 2 (lower is better)
Translates to: QLGLPLLDSGDGGRLAEGQCPGG*MGVSSS
Trigger: TGAGGACGAGACCCCCATCCAGCCTCCAGGGCATTG...CCCTTCAGCTAGCCTGCCTCCGTCCCCTGAGTCCAACAGTGGGAGCCCTAGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR CCA 90 bp CTAGGGCTCCCACTGTTGGACTCAGGGGACGGAGGCAGGCTAGCTGAAGGGGCATGGAGACTTGCTCTGTaGCCCAGGGATCCGTGCCTC +
Preference number: 2 (lower is better)
Translates to: LGLPLLDSGDGGRLAEGAWRLAL*PRDPCL
Trigger: GAGGCACGGATCCCTGGGCCACAGAGCAAGTCTCCA...TGCCCCTTCAGCTAGCCTGCCTCCGTCCCCTGAGTCCAACAGTGGGAGCCCTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR CCA 90 bp ATCCCAAGGTGGCAGGGGTGTCCCTGTGCCGTCTGCTTCCTCTCGGGCAGGAGGCCTCCACACCTCTACTaGTCTCCACGCCCTTGCATG +
Preference number: 2 (lower is better)
Translates to: IPRWQGCPCAVCFLSGRRPPHLY*SPRPCM
Trigger: CATGCAAGGGCGTGGAGACCAGTAGAGGTGTGGAGG...CCTCCTGCCCGAGAGGAAGCAGACGGCACAGGGACACCCCTGCCACCTTGGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR CCA 90 bp GTCTCCTCTGCAGAGCTACCAGGACTGCTGCGTGCTGGGACCAGGACCTCCATCAGACCCTGGTGTGGCTaGGATGGGGGACTGCTGCAG +
Preference number: 2 (lower is better)
Translates to: VSSAELPGLLRAGTRTSIRPWCG*DGGLLQ
Trigger: CTGCAGCAGTCCCCCATCCCAGCCACACCAGGGTCT...GATGGAGGTCCTGGTCCCAGCACGCAGCAGTCCTGGTAGCTCTGCAGAGGAGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR CCA 90 bp CTGCACCAGCTTGGAGGCAGATCCCAAGGTGGCAGGGGTGTCCCTGTGCCGTCTGGCCCAGCCATGTGGTaGATGACGGTGCTCAGAGAG +
Preference number: 2 (lower is better)
Translates to: LHQLGGRSQGGRGVPVPSGPAMW*MTVLRE
Trigger: CTCTCTGAGCACCGTCATCCACCACATGGCTGGGCC...AGACGGCACAGGGACACCCCTGCCACCTTGGGATCTGCCTCCAAGCTGGTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR CCA 90 bp AGGCAGATCCCAAGGTGGCAGGGGTGTCCCTGTGCCGTCTGCTTCCTCTCGGGCAAGGCACTAGAGGACTaGACTGGTCCTGGGAGCCAG +
Preference number: 2 (lower is better)
Translates to: RQIPRWQGCPCAVCFLSGKALED*TGPGSQ
Trigger: CTGGCTCCCAGGACCAGTCCAGTCCTCTAGTGCCTT...GCCCGAGAGGAAGCAGACGGCACAGGGACACCCCTGCCACCTTGGGATCTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR CAA 90 bp CCTGGGATGTCCGGCTCTTCACAGGGGATCAGACTGCGGGTCACGTaGAGAGCCAACACCATGGGCTCGGTTCCGGCTGAAAACCCGCCA +
Preference number: 2 (lower is better)
Translates to: PGMSGSSQGIRLRVT*RANTMGSVPAENPP
Trigger: TGGCGGGTTTTCAGCCGGAACCGAGCCCATGGTGTTGGCTCTCAACGTGACCCGCAGTCTGATCCCCTGTGAAGAGCCGGACATCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR TCA 90 bp GTATTTGTGGCGTATCTGGCGCTTGTCAGTGTGGGGCCCAGGCCTGATGAGCCAGAAAACCCGCCAGTGTaGGGAAGCAGGGCCCCGGGT +
Preference number: 2 (lower is better)
Translates to: VFVAYLALVSVGPRPDEPENPPV*GSRAPG
Trigger: ACCCGGGGCCCTGCTTCCTCACACTGGCGGGTTTTC...TGGCTCATCAGGCCTGGGCCCCACACTGACAAGCGCCAGATACGCCACAAATAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR TCA 90 bp CTGGCCTCCACACCTCTACTGGTCTCCACGCCCTTGCATGAGGTGACAGGAGCTCACCCGAATGCCTGCTaGAGGTGGCGCACACGTGTG +
Preference number: 2 (lower is better)
Translates to: LASTPLLVSTPLHEVTGAHPNAC*RWRTRV
Trigger: CACACGTGTGCGCCACCTTCAGCAGGCATTCGGGTG...AGCTCCTGTCACCTCATGCAAGGGCGTGGAGACCAGTAGAGGTGTGGAGGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR TCA 90 bp GGGGTGTCCCTGTGCCGTCTGCTTCCTCTCGGGCAGGAGGATTCCAGCTTCCCGCGCCCTTGCATGAGGTaGCAGGAGCTGAAATCACAC +
Preference number: 2 (lower is better)
Translates to: GVSLCRLLPLGQEDSSFPRPCMR*QELKSH
Trigger: GTGTGATTTCAGCTCCTGTCACCTCATGCAAGGGCG...CGGGAAGCTGGAATCCTCCTGCCCGAGAGGAAGCAGACGGCACAGGGACACCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR GCA 90 bp GCTGGCTTCTGCTTCAGCTACTTCTCGGGTTCCTGTCTCCTCTGCAGAGCTACCAGGACACCTGGGGGCTaGACTGCGGAGGCCAAGGGC +
Preference number: 2 (lower is better)
Translates to: AGFCFSYFSGSCLLCRATRTPGG*TAEAKG
Trigger: GCCCTTGGCCTCCGCAGTGCAGCCCCCAGGTGTCCT...GGTAGCTCTGCAGAGGAGACAGGAACCCGAGAAGTAGCTGAAGCAGAAGCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR CCA 90 bp GTCTCCTCTGCAGAGCTACCAGGACTGCTGCGTGCTGGGACCAGGACCTCCATCCAATGCCCTGGAGGCTaGATGGGGGTCTCGTCCTCA +
Preference number: 2 (lower is better)
Translates to: VSSAELPGLLRAGTRTSIQCPGG*MGVSSS
Trigger: TGAGGACGAGACCCCCATCCAGCCTCCAGGGCATTG...GATGGAGGTCCTGGTCCCAGCACGCAGCAGTCCTGGTAGCTCTGCAGAGGAGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR CCA 90 bp GCCAGAGCTCCTGGGCTCCCGTGGAGGTTAGCCCTGCAGGCACCGGGGAAATGGGAGGGAGTAAATCAGTaGGGCTTCCCTTGTCCACAG +
Preference number: 2 (lower is better)
Translates to: ARAPGLPWRLALQAPGKWEGVNQ*GFPCPQ
Trigger: CTGTGGACAAGGGAAGCCCCACTGATTTACTCCCTC...CCATTTCCCCGGTGCCTGCAGGGCTAACCTCCACGGGAGCCCAGGAGCTCTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR CCA 90 bp ATCCCAAGGTGGCAGGGGTGTCCCTGTGCCGTCTGCTTCCTCTCGGGCAGGAGGGGCAGCTGTCTGATTTaGAGACTTGCTCTGTGGCCC +
Preference number: 2 (lower is better)
Translates to: IPRWQGCPCAVCFLSGRRGSCLI*RLALWP
Trigger: GGGCCACAGAGCAAGTCTCCAAATCAGACAGCTGCC...CCTCCTGCCCGAGAGGAAGCAGACGGCACAGGGACACCCCTGCCACCTTGGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR CCA 90 bp AGGCAGATCCCAAGGTGGCAGGGGTGTCCCTGTGCCGTCTGCTTCCTCTCGGGCGGGGAAATGGGGCTATaGCCTGTGCTTCAGTCAGGA +
Preference number: 2 (lower is better)
Translates to: RQIPRWQGCPCAVCFLSGGEMGL*PVLQSG
Trigger: TCCTGACTGAAGCACAGGCCATAGCCCCATTTCCCC...GCCCGAGAGGAAGCAGACGGCACAGGGACACCCCTGCCACCTTGGGATCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR TCA 90 bp TATAGCCATCAGTCCCCTGCTGTGGCTTTGGGGATCAGAACTTCCCAGCTAGGGGGTGGCCAAGCGGGCTaGGCAATGCCCTGGAGGCTG +
Preference number: 2 (lower is better)
Translates to: YSHQSPAVALGIRTSQLGGGQAG*AMPWRL
Trigger: CAGCCTCCAGGGCATTGCTCAGCCCGCTTGGCCACC...CCCTAGCTGGGAAGTTCTGATCCCCAAAGCCACAGCAGGGGACTGATGGCTATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR TCA 90 bp CTGGCCTCCACACCTCTACTGGTCTCCACGCCCTTGCATGAGGTGACAGGAGCTGACTGCGGGTCACGTTaGGAGCCAACACCATGGGCT +
Preference number: 2 (lower is better)
Translates to: LASTPLLVSTPLHEVTGADCGSR*EPTPWA
Trigger: AGCCCATGGTGTTGGCTCTCAACGTGACCCGCAGTC...AGCTCCTGTCACCTCATGCAAGGGCGTGGAGACCAGTAGAGGTGTGGAGGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR TCA 90 bp GCCAGCAGTGTATCTCTGACACAGTCTCACCCCGCAGGGCTCCTGCAGTCTCGAGACTGCGGGTCACGTTaGGAGCCAACACCATGGGCT +
Preference number: 2 (lower is better)
Translates to: ASSVSLTQSHPAGLLQSRDCGSR*EPTPWA
Trigger: AGCCCATGGTGTTGGCTCTCAACGTGACCCGCAGTC...TCGAGACTGCAGGAGCCCTGCGGGGTGAGACTGTGTCAGAGATACACTGCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR TCA 90 bp GCTCCTGGGCTCCCGTGGAGGTTAGCCCTGCAGGCACCGGGGAAATGGGGCTATGCTGAGGCAGCTGTCTaGTTTGGAGACTTGCTCTGT +
Preference number: 2 (lower is better)
Translates to: APGLPWRLALQAPGKWGYAEAAV*FGDLLC
Trigger: ACAGAGCAAGTCTCCAAATCAGACAGCTGCCTCAGC...ATAGCCCCATTTCCCCGGTGCCTGCAGGGCTAACCTCCACGGGAGCCCAGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR TCA 90 bp ATCCCAAGGTGGCAGGGGTGTCCCTGTGCCGTCTGCTTCCTCTCGGGCAGGAGGCTGCAAGTACTATCTTaGTTCAACCCAGGGGCCGAC +
Preference number: 2 (lower is better)
Translates to: IPRWQGCPCAVCFLSGRRLQVLS*FNPGAD
Trigger: GTCGGCCCCTGGGTTGAATCAAGATAGTACTTGCAG...CCTCCTGCCCGAGAGGAAGCAGACGGCACAGGGACACCCCTGCCACCTTGGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR GCA 90 bp GTATTTGTGGCGTATCTGGCGCTTGTCAGTGTGGGGCCCAGGCCTGATGAGCCAGGTGGCGCACACGTGTaGCTGGGATGTCCGGCTCTT +
Preference number: 2 (lower is better)
Translates to: VFVAYLALVSVGPRPDEPGGAHV*LGCPAL
Trigger: AAGAGCCGGACATCCCAGGCACACGTGTGCGCCACC...TGGCTCATCAGGCCTGGGCCCCACACTGACAAGCGCCAGATACGCCACAAATAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR GCA 90 bp TTGAGGGTCCTGACCCGACCTCATTCTGCTATAGCCATCAGTCCCCTGCTGTGGTGGCCCAGGGATCCGTaGCTCAGCCCAGCCTCACAG +
Preference number: 2 (lower is better)
Translates to: LRVLTRPHSAIAISPLLWWPRDP*LSPASQ
Trigger: CTGTGAGGCTGGGCTGAGGCACGGATCCCTGGGCCA...CCACAGCAGGGGACTGATGGCTATAGCAGAATGAGGTCGGGTCAGGACCCTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR CCA 90 bp CTGGCCTCCACACCTCTACTGGTCTCCACGCCCTTGCATGAGGTGACAGGAGCTGCGCACACGTGTGCCTaGGATGTCCGGCTCTTCACA +
Preference number: 2 (lower is better)
Translates to: LASTPLLVSTPLHEVTGAAHTCA*DVRLFT
Trigger: TGTGAAGAGCCGGACATCCCAGGCACACGTGTGCGC...AGCTCCTGTCACCTCATGCAAGGGCGTGGAGACCAGTAGAGGTGTGGAGGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR CCA 90 bp ATCCCAAGGTGGCAGGGGTGTCCCTGTGCCGTCTGCTTCCTCTCGGGCAGGAGGCTTGGTGTTCCCAGATaGTGTTTGAGGGTCCTGACC +
Preference number: 2 (lower is better)
Translates to: IPRWQGCPCAVCFLSGRRLGVPR*CLRVLT
Trigger: GGTCAGGACCCTCAAACACCATCTGGGAACACCAAG...CCTCCTGCCCGAGAGGAAGCAGACGGCACAGGGACACCCCTGCCACCTTGGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR CCA 90 bp CCGGCAGACCTGAGCCATGAGTGTGGTCTCCATTCCCTCGGGCTGCACCCCCAGCTTGGTGTTCCCAGATaGTGTTTGAGGGTCCTGACC +
Preference number: 2 (lower is better)
Translates to: PADLSHECGLHSLGLHPQLGVPR*CLRVLT
Trigger: GGTCAGGACCCTCAAACACCATCTGGGAACACCAAG...CTGGGGGTGCAGCCCGAGGGAATGGAGACCACACTCATGGCTCAGGTCTGCCGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR GCA 90 bp TTGAGGGTCCTGACCCGACCTCATTCTGCTATAGCCATCAGTCCCCTGCTGTGGGGTGGCGCACACGTGTaGCTGGGATGTCCGGCTCTT +
Preference number: 2 (lower is better)
Translates to: LRVLTRPHSAIAISPLLWGGAHV*LGCPAL
Trigger: AAGAGCCGGACATCCCAGGCACACGTGTGCGCCACC...CCACAGCAGGGGACTGATGGCTATAGCAGAATGAGGTCGGGTCAGGACCCTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR GCA 90 bp GTCTCCTCTGCAGAGCTACCAGGACTGCTGCGTGCTGGGACCAGGACCTCCATCGACCCGACCTCATTCTaGTATAGCCATCAGTCCCCT +
Preference number: 2 (lower is better)
Translates to: VSSAELPGLLRAGTRTSIDPTSF*YSHQSP
Trigger: AGGGGACTGATGGCTATAGCAGAATGAGGTCGGGTC...GATGGAGGTCCTGGTCCCAGCACGCAGCAGTCCTGGTAGCTCTGCAGAGGAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR CCA 90 bp CAGCCCGAAAAGGTGGGACTGAGAGGGGACACTTGTGGCCAGCAGTGTATCTCTGCGCACACGTGTGCCTaGGATGTCCGGCTCTTCACA +
Preference number: 2 (lower is better)
Translates to: QPEKVGLRGDTCGQQCISAHTCA*DVRLFT
Trigger: TGTGAAGAGCCGGACATCCCAGGCACACGTGTGCGC...AGAGATACACTGCTGGCCACAAGTGTCCCCTCTCAGTCCCACCTTTTCGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR TCA 90 bp TTGAGGGTCCTGACCCGACCTCATTCTGCTATAGCCATCAGTCCCCTGCTGTGGACACATCCCAGGGGCTaGGGCAGCTGTCTGATTTGG +
Preference number: 2 (lower is better)
Translates to: LRVLTRPHSAIAISPLLWTHPRG*GSCLIW
Trigger: CCAAATCAGACAGCTGCCTCAGCCCCTGGGATGTGT...CCACAGCAGGGGACTGATGGCTATAGCAGAATGAGGTCGGGTCAGGACCCTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR TCA 90 bp GCTGGCTTCTGCTTCAGCTACTTCTCGGGTTCCTGTCTCCTCTGCAGAGCTACCCAGCCATGTGGTGGATaGCGGTGCTCAGAGAGAGGA +
Preference number: 2 (lower is better)
Translates to: AGFCFSYFSGSCLLCRATQPCGG*RCSERG
Trigger: TCCTCTCTCTGAGCACCGTCATCCACCACATGGCTG...GGTAGCTCTGCAGAGGAGACAGGAACCCGAGAAGTAGCTGAAGCAGAAGCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR GCA 90 bp GTTCCCAGATGGTGTTTGAGGGTCCTGACCCGACCTCATTCTGCTATAGCCATCAGCCCAGCACCCGAATaGCTGCTGAAGGTGGCGCAC +
Preference number: 2 (lower is better)
Translates to: VPRWCLRVLTRPHSAIAISPAPE*LLKVAH
Trigger: GTGCGCCACCTTCAGCAGGCATTCGGGTGCTGGGCT...GATGGCTATAGCAGAATGAGGTCGGGTCAGGACCCTCAAACACCATCTGGGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR CCA 90 bp GAGTGGGGAAGAGAGGGAGTAAATCAGTGGGGCTTCCCTTGTCCACAGGTTATTAAGCAGGGCCCCGGGTaGCCAAGCGGGCTGAGCAAT +
Preference number: 2 (lower is better)
Translates to: EWGREGVNQWGFPCPQVIKQGPG*PSGLSN
Trigger: ATTGCTCAGCCCGCTTGGCCACCCGGGGCCCTGCTT...AATAACCTGTGGACAAGGGAAGCCCCACTGATTTACTCCCTCTCTTCCCCACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR CCA 90 bp GCCAGCAGTGTATCTCTGACACAGTCTCACCCCGCAGGGCTCCTGCAGTCTCGATATTTGTGGCGTATCTaGCGCTTGTCAGTGTGGGGC +
Preference number: 2 (lower is better)
Translates to: ASSVSLTQSHPAGLLQSRYLWRI*RLSVWG
Trigger: GCCCCACACTGACAAGCGCCAGATACGCCACAAATA...TCGAGACTGCAGGAGCCCTGCGGGGTGAGACTGTGTCAGAGATACACTGCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR CCA 90 bp GCCAGCAGTGTATCTCTGACACAGTCTCACCCCGCAGGGCTCCTGCAGTCTCGAGAGGGAGTAAATCAGTaGGGCTTCCCTTGTCCACAG +
Preference number: 2 (lower is better)
Translates to: ASSVSLTQSHPAGLLQSREGVNQ*GFPCPQ
Trigger: CTGTGGACAAGGGAAGCCCCACTGATTTACTCCCTC...TCGAGACTGCAGGAGCCCTGCGGGGTGAGACTGTGTCAGAGATACACTGCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
3UTR CAA 90 bp GACCCGACCTCATTCTGCTATAGCCATCAGTCCCCTGCTGTGGCTTaGGGGATCAGAACTTCCCAGCTAGGGCTCCCACTGTTGGACTCA +
Preference number: 2 (lower is better)
Translates to: DPTSFCYSHQSPAVA*GIRTSQLGLPLLDS
Trigger: TGAGTCCAACAGTGGGAGCCCTAGCTGGGAAGTTCTGATCCCCAAAGCCACAGCAGGGGACTGATGGCTATAGCAGAATGAGGTCGGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR TCA 90 bp GTTCCCAGATGGTGTTTGAGGGTCCTGACCCGACCTCATTCTGCTATAGCCATCGACTGCGGGTCACGTTaGGAGCCAACACCATGGGCT +
Preference number: 2 (lower is better)
Translates to: VPRWCLRVLTRPHSAIAIDCGSR*EPTPWA
Trigger: AGCCCATGGTGTTGGCTCTCAACGTGACCCGCAGTC...GATGGCTATAGCAGAATGAGGTCGGGTCAGGACCCTCAAACACCATCTGGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR CCA 90 bp GCTGTGGCTTTGGGGATCAGAACTTCCCAGCTAGGGCTCCCACTGTTGGACTCAGGCAGCTGTCTGATTTaGAGACTTGCTCTGTGGCCC +
Preference number: 2 (lower is better)
Translates to: AVALGIRTSQLGLPLLDSGSCLI*RLALWP
Trigger: GGGCCACAGAGCAAGTCTCCAAATCAGACAGCTGCC...TGAGTCCAACAGTGGGAGCCCTAGCTGGGAAGTTCTGATCCCCAAAGCCACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR CCA 90 bp GTTCCCAGATGGTGTTTGAGGGTCCTGACCCGACCTCATTCTGCTATAGCCATCGCTCCTCTCTCTGCCTaGCCTCCACACCTCTACTGG +
Preference number: 2 (lower is better)
Translates to: VPRWCLRVLTRPHSAIAIAPLSA*PPHLYW
Trigger: CCAGTAGAGGTGTGGAGGCCAGGCAGAGAGAGGAGC...GATGGCTATAGCAGAATGAGGTCGGGTCAGGACCCTCAAACACCATCTGGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR CCA 90 bp GCCAGCAGTGTATCTCTGACACAGTCTCACCCCGCAGGGCTCCTGCAGTCTCGAATCAGTCCCCTGCTGTaGCTTTGGGGATCAGAACTT +
Preference number: 2 (lower is better)
Translates to: ASSVSLTQSHPAGLLQSRISPLL*LWGSEL
Trigger: AAGTTCTGATCCCCAAAGCCACAGCAGGGGACTGAT...TCGAGACTGCAGGAGCCCTGCGGGGTGAGACTGTGTCAGAGATACACTGCTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR CCA 90 bp GCTGGCTTCTGCTTCAGCTACTTCTCGGGTTCCTGTCTCCTCTGCAGAGCTACCAGCCTCCCGAGTAACTaGGATTACAGGTGCCCACCA +
Preference number: 2 (lower is better)
Translates to: AGFCFSYFSGSCLLCRATSLPSN*DYRCPP
Trigger: TGGTGGGCACCTGTAATCCCAGTTACTCGGGAGGCT...GGTAGCTCTGCAGAGGAGACAGGAACCCGAGAAGTAGCTGAAGCAGAAGCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR CCA 90 bp CATCTAGCTGCAAGTACTATCTTGATTCAACCCAGGGGCCGACAATGGACTGCAGCTGTCTCCTTGGGGTaGAGACTGGCGGCTGCAGCC +
Preference number: 2 (lower is better)
Translates to: HLAASTILIQPRGRQWTAAVSLG*RLAAAA
Trigger: GGCTGCAGCCGCCAGTCTCCACCCCAAGGAGACAGC...TGCAGTCCATTGTCGGCCCCTGGGTTGAATCAAGATAGTACTTGCAGCTAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR CAA 90 bp CTCCTGCAGTCTCGATTCAGGGTGCTTGGTGTTCCCAGATGGTGTTaGAGGGTCCTGACCCGACCTCATTCTGCTATAGCCATCAGTCCC +
Preference number: 2 (lower is better)
Translates to: LLQSRFRVLGVPRWC*RVLTRPHSAIAISP
Trigger: GGGACTGATGGCTATAGCAGAATGAGGTCGGGTCAGGACCCTCAAACACCATCTGGGAACACCAAGCACCCTGAATCGAGACTGCAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR TCA 90 bp CAGCCCGAAAAGGTGGGACTGAGAGGGGACACTTGTGGCCAGCAGTGTATCTCTGCTGAGGCAGCTGTCTaGTTTGGAGACTTGCTCTGT +
Preference number: 2 (lower is better)
Translates to: QPEKVGLRGDTCGQQCISAEAAV*FGDLLC
Trigger: ACAGAGCAAGTCTCCAAATCAGACAGCTGCCTCAGC...AGAGATACACTGCTGGCCACAAGTGTCCCCTCTCAGTCCCACCTTTTCGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR GCA 90 bp TTGAGGGTCCTGACCCGACCTCATTCTGCTATAGCCATCAGTCCCCTGCTGTGGTCTGATTTGGAGACTTaGTCTGTGGCCCAGGGATCC +
Preference number: 2 (lower is better)
Translates to: LRVLTRPHSAIAISPLLWSDLET*SVAQGS
Trigger: GGATCCCTGGGCCACAGAGCAAGTCTCCAAATCAGA...CCACAGCAGGGGACTGATGGCTATAGCAGAATGAGGTCGGGTCAGGACCCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR CCA 90 bp TTGAGGGTCCTGACCCGACCTCATTCTGCTATAGCCATCAGTCCCCTGCTGTGGTATTTGTGGCGTATCTaGCGCTTGTCAGTGTGGGGC +
Preference number: 2 (lower is better)
Translates to: LRVLTRPHSAIAISPLLWYLWRI*RLSVWG
Trigger: GCCCCACACTGACAAGCGCCAGATACGCCACAAATA...CCACAGCAGGGGACTGATGGCTATAGCAGAATGAGGTCGGGTCAGGACCCTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR CCA 90 bp CAGCTAGGGCTCCCACTGTTGGACTCAGGGGACGGAGGCAGGCTAGCTGAAGGGAAGCATTTGACACAGTaGTATTTGTGGCGTATCTGG +
Preference number: 2 (lower is better)
Translates to: QLGLPLLDSGDGGRLAEGKHLTQ*YLWRIW
Trigger: CCAGATACGCCACAAATACCACTGTGTCAAATGCTT...CCCTTCAGCTAGCCTGCCTCCGTCCCCTGAGTCCAACAGTGGGAGCCCTAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR CCA 90 bp GCTGGCTTCTGCTTCAGCTACTTCTCGGGTTCCTGTCTCCTCTGCAGAGCTACCACCAGGACCTCCATCTaGAATCCACTCTCGATACCC +
Preference number: 2 (lower is better)
Translates to: AGFCFSYFSGSCLLCRATTRTSI*NPLSIP
Trigger: GGGTATCGAGAGTGGATTCCAGATGGAGGTCCTGGT...GGTAGCTCTGCAGAGGAGACAGGAACCCGAGAAGTAGCTGAAGCAGAAGCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR TCA 90 bp CATCTAGCTGCAAGTACTATCTTGATTCAACCCAGGGGCCGACAATGGACTGCAACTCCTGACCTCAGGTaGTCCGCCCACCTCAACCTC +
Preference number: 2 (lower is better)
Translates to: HLAASTILIQPRGRQWTATPDLR*SAHLNL
Trigger: GAGGTTGAGGTGGGCGGATCACCTGAGGTCAGGAGT...TGCAGTCCATTGTCGGCCCCTGGGTTGAATCAAGATAGTACTTGCAGCTAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR CCA 90 bp CATCTAGCTGCAAGTACTATCTTGATTCAACCCAGGGGCCGACAATGGACTGCACAGGCACCGGGGAAATaGGGCTATGGCCTGTGCTTC +
Preference number: 2 (lower is better)
Translates to: HLAASTILIQPRGRQWTAQAPGK*GYGLCF
Trigger: GAAGCACAGGCCATAGCCCCATTTCCCCGGTGCCTG...TGCAGTCCATTGTCGGCCCCTGGGTTGAATCAAGATAGTACTTGCAGCTAGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR TCA 90 bp CTAGGGCTCCCACTGTTGGACTCAGGGGACGGAGGCAGGCTAGCTGAAGGGGCACCCAAAAATATATCTTaGAAGCATTTGACACAGTGG +
Preference number: 2 (lower is better)
Translates to: LGLPLLDSGDGGRLAEGAPKNIS*KHLTQW
Trigger: CCACTGTGTCAAATGCTTTCAAGATATATTTTTGGG...TGCCCCTTCAGCTAGCCTGCCTCCGTCCCCTGAGTCCAACAGTGGGAGCCCTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR TCA 90 bp CAGCTAGGGCTCCCACTGTTGGACTCAGGGGACGGAGGCAGGCTAGCTGAAGGGCCCAAAAATATATCTTaGAAGCATTTGACACAGTGG +
Preference number: 2 (lower is better)
Translates to: QLGLPLLDSGDGGRLAEGPKNIS*KHLTQW
Trigger: CCACTGTGTCAAATGCTTTCAAGATATATTTTTGGG...CCCTTCAGCTAGCCTGCCTCCGTCCCCTGAGTCCAACAGTGGGAGCCCTAGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR CCA 90 bp TGGATGACGGTGCTCAGAGAGAGGATTTGGGTCCTGCGGGAGGTGACAGCTGTTACACAGTGGTATTTGTaGCGTATCTGGCGCTTGTCA +
Preference number: 2 (lower is better)
Translates to: WMTVLRERIWVLREVTAVTQWYL*RIWRLS
Trigger: TGACAAGCGCCAGATACGCCACAAATACCACTGTGT...AACAGCTGTCACCTCCCGCAGGACCCAAATCCTCTCTCTGAGCACCGTCATCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR CCA 90 bp TTGAGGGTCCTGACCCGACCTCATTCTGCTATAGCCATCAGTCCCCTGCTGTGGACACAGTGGTATTTGTaGCGTATCTGGCGCTTGTCA +
Preference number: 2 (lower is better)
Translates to: LRVLTRPHSAIAISPLLWTQWYL*RIWRLS
Trigger: TGACAAGCGCCAGATACGCCACAAATACCACTGTGT...CCACAGCAGGGGACTGATGGCTATAGCAGAATGAGGTCGGGTCAGGACCCTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR CCA 90 bp CATCTAGCTGCAAGTACTATCTTGATTCAACCCAGGGGCCGACAATGGACTGCATATTTGTGGCGTATCTaGCGCTTGTCAGTGTGGGGC +
Preference number: 2 (lower is better)
Translates to: HLAASTILIQPRGRQWTAYLWRI*RLSVWG
Trigger: GCCCCACACTGACAAGCGCCAGATACGCCACAAATA...TGCAGTCCATTGTCGGCCCCTGGGTTGAATCAAGATAGTACTTGCAGCTAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR TCA 90 bp CAGCCCGAAAAGGTGGGACTGAGAGGGGACACTTGTGGCCAGCAGTGTATCTCTAAATGTGTTTTTCCCTaGAGATTTCCAGTGTATTCC +
Preference number: 2 (lower is better)
Translates to: QPEKVGLRGDTCGQQCISKCVFP*RFPVYS
Trigger: GGAATACACTGGAAATCTTCAGGGAAAAACACATTT...AGAGATACACTGCTGGCCACAAGTGTCCCCTCTCAGTCCCACCTTTTCGGGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
3UTR CCA 72 bp GATGCCCTGTGCCATGGACCTGCCGGCCAGAGCTCCTaGGCTCCCGTGGAGGTTAGCCCTGCAGGCACCGGG +
Preference number: 3 (lower is better)
Translates to: DALCHGPAGQSS*APVEVSPAGTG
Trigger: CCCGGTGCCTGCAGGGCTAACCTCCACGGGAGCCCAGGAGCTCTGGCCGGCAGGTCCATGGCACAGGGCATC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR CCA 72 bp CCCACCTCCGTCTCGGGGCCTGGCTTCCCCACTGGATaGCAGAGGCCGCTCCAGGTGCTTCCACTTGGTGGC +
Preference number: 3 (lower is better)
Translates to: PTSVSGPGFPTG*QRPLQVLPLGG
Trigger: GCCACCAAGTGGAAGCACCTGGAGCGGCCTCTGCCATCCAGTGGGGAAGCCAGGCCCCGAGACGGAGGTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR CAA 90 bp GCCAGAGCTCCTGGGCTCCCGTGGAGGTTAGCCCTGCAGGCACCGGGGAAATGGCTAGGGCTCCCACTGTaGGACTCAGGGGACGGAGGC +
Preference number: 3 (lower is better)
Translates to: ARAPGLPWRLALQAPGKWLGLPL*DSGDGG
Trigger: GCCTCCGTCCCCTGAGTCCAACAGTGGGAGCCCTAG...CCATTTCCCCGGTGCCTGCAGGGCTAACCTCCACGGGAGCCCAGGAGCTCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR CAA 90 bp CCGGCAGACCTGAGCCATGAGTGTGGTCTCCATTCCCTCGGGCTGCACCCCCAGCCCTGGGGAAGAGGGTaGGCCGGACAGACCCTGGTG +
Preference number: 3 (lower is better)
Translates to: PADLSHECGLHSLGLHPQPWGRG*AGQTLV
Trigger: CACCAGGGTCTGTCCGGCCAACCCTCTTCCCCAGGG...CTGGGGGTGCAGCCCGAGGGAATGGAGACCACACTCATGGCTCAGGTCTGCCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR CAA 90 bp GGGGTGTCCCTGTGCCGTCTGCTTCCTCTCGGGCAGGAGGATTCCAGCTTCCCGTGGCGTATCTGGCGCTaGTCAGTGTGGGGCCCAGGC +
Preference number: 3 (lower is better)
Translates to: GVSLCRLLPLGQEDSSFPWRIWR*SVWGPG
Trigger: GCCTGGGCCCCACACTGACAAGCGCCAGATACGCCA...CGGGAAGCTGGAATCCTCCTGCCCGAGAGGAAGCAGACGGCACAGGGACACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR TCA 72 bp CCTGATGAGCCACCAGCCCAGCACCCGAATGCCTGCTaGAGGTGGCGCACACGTGTGCCTGGGATGTCCGGC +
Preference number: 3 (lower is better)
Translates to: PDEPPAQHPNAC*RWRTRVPGMSG
Trigger: GCCGGACATCCCAGGCACACGTGTGCGCCACCTTCAGCAGGCATTCGGGTGCTGGGCTGGTGGCTCATCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
3UTR TCA 72 bp CACGTTGAGAGCCAACACCATGGGCTCGGTTCCGGCTaGAAACCCGCCAGTGTGAGGAAGCAGGGCCCCGGG +
Preference number: 3 (lower is better)
Translates to: HVESQHHGLGSG*KPASVRKQGPG
Trigger: CCCGGGGCCCTGCTTCCTCACACTGGCGGGTTTTCAGCCGGAACCGAGCCCATGGTGTTGGCTCTCAACGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
3UTR GCA 72 bp CAGATCCCAAGGTGGCAGGGGTGTCCCTGTGCCGTCTaGTTCCTCTCGGGCAGGAGGATTCCAGCTTCCCGG +
Preference number: 3 (lower is better)
Translates to: QIPRWQGCPCAV*FLSGRRIPASR
Trigger: CCGGGAAGCTGGAATCCTCCTGCCCGAGAGGAAGCAGACGGCACAGGGACACCCCTGCCACCTTGGGATCTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR CAA 90 bp GCTCCTGGGCTCCCGTGGAGGTTAGCCCTGCAGGCACCGGGGAAATGGGGCTATCTGGTCTCCACGCCCTaGCATGAGGTGACAGGAGCT +
Preference number: 3 (lower is better)
Translates to: APGLPWRLALQAPGKWGYLVSTP*HEVTGA
Trigger: AGCTCCTGTCACCTCATGCAAGGGCGTGGAGACCAG...ATAGCCCCATTTCCCCGGTGCCTGCAGGGCTAACCTCCACGGGAGCCCAGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR CAA 90 bp GCCAGAGCTCCTGGGCTCCCGTGGAGGTTAGCCCTGCAGGCACCGGGGAAATGGGTTCCCAGATGGTGTTaGAGGGTCCTGACCCGACCT +
Preference number: 3 (lower is better)
Translates to: ARAPGLPWRLALQAPGKWVPRWC*RVLTRP
Trigger: AGGTCGGGTCAGGACCCTCAAACACCATCTGGGAAC...CCATTTCCCCGGTGCCTGCAGGGCTAACCTCCACGGGAGCCCAGGAGCTCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR CCA 72 bp CCCGAATGCCTGCTGAAGGTGGCGCACACGTGTGCCTaGGATGTCCGGCTCTTCACAGGGGATCAGACTGCG +
Preference number: 3 (lower is better)
Translates to: PECLLKVAHTCA*DVRLFTGDQTA
Trigger: CGCAGTCTGATCCCCTGTGAAGAGCCGGACATCCCAGGCACACGTGTGCGCCACCTTCAGCAGGCATTCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
3UTR CCA 72 bp CTCCCGTGGAGGTTAGCCCTGCAGGCACCGGGGAAATaGGGCTATGGCCTGTGCTTCAGTCAGGACACCTGG +
Preference number: 3 (lower is better)
Translates to: LPWRLALQAPGK*GYGLCFSQDTW
Trigger: CCAGGTGTCCTGACTGAAGCACAGGCCATAGCCCCATTTCCCCGGTGCCTGCAGGGCTAACCTCCACGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR CCA 72 bp TCCAGCAGTTTTGCAGTCTTCCGATGCCCTGTGCCATaGACCTGCCGGCCAGAGCTCCTGGGCTCCCGTGGA +
Preference number: 3 (lower is better)
Translates to: SSSFAVFRCPVP*TCRPELLGSRG
Trigger: TCCACGGGAGCCCAGGAGCTCTGGCCGGCAGGTCCATGGCACAGGGCATCGGAAGACTGCAAAACTGCTGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR CCA 72 bp CGATACCCTGCACCAGCTTGGAGGCAGATCCCAAGGTaGCAGGGGTGTCCCTGTGCCGTCTGCTTCCTCTCG +
Preference number: 3 (lower is better)
Translates to: RYPAPAWRQIPR*QGCPCAVCFLS
Trigger: CGAGAGGAAGCAGACGGCACAGGGACACCCCTGCCACCTTGGGATCTGCCTCCAAGCTGGTGCAGGGTATCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR CAA 90 bp CTGGCCTCCACACCTCTACTGGTCTCCACGCCCTTGCATGAGGTGACAGGAGCTTTCCCCTCCTCCGTCTaGGCTCTCTCCGCTTCGTCC +
Preference number: 3 (lower is better)
Translates to: LASTPLLVSTPLHEVTGAFPSSV*ALSASS
Trigger: GGACGAAGCGGAGAGAGCCAAGACGGAGGAGGGGAA...AGCTCCTGTCACCTCATGCAAGGGCGTGGAGACCAGTAGAGGTGTGGAGGCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR CAA 90 bp AGGCAGATCCCAAGGTGGCAGGGGTGTCCCTGTGCCGTCTGCTTCCTCTCGGGCAGGCAGCTGTCTGATTaGGAGACTTGCTCTGTGGCC +
Preference number: 3 (lower is better)
Translates to: RQIPRWQGCPCAVCFLSGRQLSD*ETCSVA
Trigger: GGCCACAGAGCAAGTCTCCAAATCAGACAGCTGCCT...GCCCGAGAGGAAGCAGACGGCACAGGGACACCCCTGCCACCTTGGGATCTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR CAA 90 bp GCTGGCTTCTGCTTCAGCTACTTCTCGGGTTCCTGTCTCCTCTGCAGAGCTACCGCAGGGGCTGTCTCCTaGGGGTGGAGACTGGCGGCT +
Preference number: 3 (lower is better)
Translates to: AGFCFSYFSGSCLLCRATAGAVS*GWRLAA
Trigger: AGCCGCCAGTCTCCACCCCAAGGAGACAGCCCCTGC...GGTAGCTCTGCAGAGGAGACAGGAACCCGAGAAGTAGCTGAAGCAGAAGCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR TCA 72 bp GAGGCCGCTCCAGGTGCTTCCACTTGGTGGCGCCCATaGGTCTGCTACTGGAGAAGCTGTGGTCTCAGGGAG +
Preference number: 3 (lower is better)
Translates to: EAAPGASTWWRP*VCYWRSCGLRE
Trigger: CTCCCTGAGACCACAGCTTCTCCAGTAGCAGACTCATGGGCGCCACCAAGTGGAAGCACCTGGAGCGGCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR GCA 72 bp AGCACCCGAATGCCTGCTGAAGGTGGCGCACACGTGTaGCTGGGATGTCCGGCTCTTCACAGGGGATCAGAC +
Preference number: 3 (lower is better)
Translates to: STRMPAEGGAHV*LGCPALHRGSD
Trigger: GTCTGATCCCCTGTGAAGAGCCGGACATCCCAGGCACACGTGTGCGCCACCTTCAGCAGGCATTCGGGTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
3UTR GCA 72 bp GTAAGTCCAGCAGTTTTGCAGTCTTCCGATGCCCTGTaGCATGGACCTGCCGGCCAGAGCTCCTGGGCTCCC +
Preference number: 3 (lower is better)
Translates to: VSPAVLQSSDAL*HGPAGQSSWAP
Trigger: GGGAGCCCAGGAGCTCTGGCCGGCAGGTCCATGGCACAGGGCATCGGAAGACTGCAAAACTGCTGGACTTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR CCA 72 bp AGGGGACACCATGGCTGGGAGAAGCCCGCCTCTATGTaGCAAGGGGACTGCGGCTGGCTTCTGCTTCAGCTA +
Preference number: 3 (lower is better)
Translates to: RGHHGWEKPASM*QGDCGWLLLQL
Trigger: TAGCTGAAGCAGAAGCCAGCCGCAGTCCCCTTGCCACATAGAGGCGGGCTTCTCCCAGCCATGGTGTCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR CAA 90 bp GCTGTGGCTTTGGGGATCAGAACTTCCCAGCTAGGGCTCCCACTGTTGGACTCATGGCGTATCTGGCGCTaGTCAGTGTGGGGCCCAGGC +
Preference number: 3 (lower is better)
Translates to: AVALGIRTSQLGLPLLDSWRIWR*SVWGPG
Trigger: GCCTGGGCCCCACACTGACAAGCGCCAGATACGCCA...TGAGTCCAACAGTGGGAGCCCTAGCTGGGAAGTTCTGATCCCCAAAGCCACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
3UTR TCA 72 bp CCGGCTCTTCACAGGGGATCAGACTGCGGGTCACGTTaGGAGCCAACACCATGGGCTCGGTTCCGGCTGAAA +
Preference number: 3 (lower is better)
Translates to: PALHRGSDCGSR*EPTPWARFRLK
Trigger: TTTCAGCCGGAACCGAGCCCATGGTGTTGGCTCTCAACGTGACCCGCAGTCTGATCCCCTGTGAAGAGCCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
3UTR GCA 72 bp CTCGGGTTCCTGTCTCCTCTGCAGAGCTACCAGGACTaGTGCGTGCTGGGACCAGGACCTCCATCTGGAATC +
Preference number: 3 (lower is better)
Translates to: LGFLSPLQSYQD*CVLGPGPPSGI
Trigger: GATTCCAGATGGAGGTCCTGGTCCCAGCACGCAGCAGTCCTGGTAGCTCTGCAGAGGAGACAGGAACCCGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR CCA 72 bp CCAGGACTGCTGCGTGCTGGGACCAGGACCTCCATCTaGAATCCACTCTCGATACCCTGCACCAGCTTGGAG +
Preference number: 3 (lower is better)
Translates to: PGLLRAGTRTSI*NPLSIPCTSLE
Trigger: CTCCAAGCTGGTGCAGGGTATCGAGAGTGGATTCCAGATGGAGGTCCTGGTCCCAGCACGCAGCAGTCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR CAA 90 bp GCTGTGGCTTTGGGGATCAGAACTTCCCAGCTAGGGCTCCCACTGTTGGACTCATTCCCCTCCTCCGTCTaGGCTCTCTCCGCTTCGTCC +
Preference number: 3 (lower is better)
Translates to: AVALGIRTSQLGLPLLDSFPSSV*ALSASS
Trigger: GGACGAAGCGGAGAGAGCCAAGACGGAGGAGGGGAA...TGAGTCCAACAGTGGGAGCCCTAGCTGGGAAGTTCTGATCCCCAAAGCCACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
3UTR TCA 72 bp ACTGAGAGGGGACACTTGTGGCCAGCAGTGTATCTCTaGCACAGTCTCACCCCGCAGGGCTCCTGCAGTCTC +
Preference number: 3 (lower is better)
Translates to: TERGHLWPAVYL*HSLTPQGSCSL
Trigger: GAGACTGCAGGAGCCCTGCGGGGTGAGACTGTGTCAGAGATACACTGCTGGCCACAAGTGTCCCCTCTCAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
3UTR CCA 72 bp CCATCTGGAATCCACTCTCGATACCCTGCACCAGCTTaGAGGCAGATCCCAAGGTGGCAGGGGTGTCCCTGT +
Preference number: 3 (lower is better)
Translates to: PSGIHSRYPAPA*RQIPRWQGCPC
Trigger: ACAGGGACACCCCTGCCACCTTGGGATCTGCCTCCAAGCTGGTGCAGGGTATCGAGAGTGGATTCCAGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR CCA 72 bp GAGAAGCCCGCCTCTATGTGGCAAGGGGACTGCGGCTaGCTTCTGCTTCAGCTACTTCTCGGGTTCCTGTCT +
Preference number: 3 (lower is better)
Translates to: EKPASMWQGDCG*LLLQLLLGFLS
Trigger: AGACAGGAACCCGAGAAGTAGCTGAAGCAGAAGCCAGCCGCAGTCCCCTTGCCACATAGAGGCGGGCTTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR CAA 90 bp TGGATGACGGTGCTCAGAGAGAGGATTTGGGTCCTGCGGGAGGTGACAGCTGTTAGACTGCGGGTCACGTaGAGAGCCAACACCATGGGC +
Preference number: 3 (lower is better)
Translates to: WMTVLRERIWVLREVTAVRLRVT*RANTMG
Trigger: GCCCATGGTGTTGGCTCTCAACGTGACCCGCAGTCT...AACAGCTGTCACCTCCCGCAGGACCCAAATCCTCTCTCTGAGCACCGTCATCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR CAA 90 bp CAGTCTCGATTCAGGGTGCTTGGTGTTCCCAGATGGTGTTTGAGGGTCCTGACCCTGGTCTCCACGCCCTaGCATGAGGTGACAGGAGCT +
Preference number: 3 (lower is better)
Translates to: QSRFRVLGVPRWCLRVLTLVSTP*HEVTGA
Trigger: AGCTCCTGTCACCTCATGCAAGGGCGTGGAGACCAG...GGTCAGGACCCTCAAACACCATCTGGGAACACCAAGCACCCTGAATCGAGACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR CAA 90 bp CAGCCCGAAAAGGTGGGACTGAGAGGGGACACTTGTGGCCAGCAGTGTATCTCTGTTCCCAGATGGTGTTaGAGGGTCCTGACCCGACCT +
Preference number: 3 (lower is better)
Translates to: QPEKVGLRGDTCGQQCISVPRWC*RVLTRP
Trigger: AGGTCGGGTCAGGACCCTCAAACACCATCTGGGAAC...AGAGATACACTGCTGGCCACAAGTGTCCCCTCTCAGTCCCACCTTTTCGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
3UTR TCA 72 bp CCACACCTCTACTGGTCTCCACGCCCTTGCATGAGGTaGCAGGAGCTGAAATCACACATCCCAGGGGCTGAG +
Preference number: 3 (lower is better)
Translates to: PHLYWSPRPCMR*QELKSHIPGAE
Trigger: CTCAGCCCCTGGGATGTGTGATTTCAGCTCCTGTCACCTCATGCAAGGGCGTGGAGACCAGTAGAGGTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
3UTR CCA 72 bp TGTCTCCTCTGCAGAGCTACCAGGACTGCTGCGTGCTaGGACCAGGACCTCCATCTGGAATCCACTCTCGAT +
Preference number: 3 (lower is better)
Translates to: CLLCRATRTAAC*DQDLHLESTLD
Trigger: ATCGAGAGTGGATTCCAGATGGAGGTCCTGGTCCCAGCACGCAGCAGTCCTGGTAGCTCTGCAGAGGAGACA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR CAA 90 bp GAGTGGGGAAGAGAGGGAGTAAATCAGTGGGGCTTCCCTTGTCCACAGGTTATTTTCCCCTCCTCCGTCTaGGCTCTCTCCGCTTCGTCC +
Preference number: 3 (lower is better)
Translates to: EWGREGVNQWGFPCPQVIFPSSV*ALSASS
Trigger: GGACGAAGCGGAGAGAGCCAAGACGGAGGAGGGGAA...AATAACCTGTGGACAAGGGAAGCCCCACTGATTTACTCCCTCTCTTCCCCACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
3UTR TCA 72 bp CTGAAATCACACATCCCAGGGGCTGAGGCAGCTGTCTaGTTTGGAGACTTGCTCTGTGGCCCAGGGATCCGT +
Preference number: 3 (lower is better)
Translates to: LKSHIPGAEAAV*FGDLLCGPGIR
Trigger: ACGGATCCCTGGGCCACAGAGCAAGTCTCCAAATCAGACAGCTGCCTCAGCCCCTGGGATGTGTGATTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
3UTR GCA 72 bp CAGATGGTGTTTGAGGGTCCTGACCCGACCTCATTCTaGTATAGCCATCAGTCCCCTGCTGTGGCTTTGGGG +
Preference number: 3 (lower is better)
Translates to: QMVFEGPDPTSF*YSHQSPAVALG
Trigger: CCCCAAAGCCACAGCAGGGGACTGATGGCTATAGCAGAATGAGGTCGGGTCAGGACCCTCAAACACCATCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR CAA 90 bp GAGTGGGGAAGAGAGGGAGTAAATCAGTGGGGCTTCCCTTGTCCACAGGTTATTAGACTGCGGGTCACGTaGAGAGCCAACACCATGGGC +
Preference number: 3 (lower is better)
Translates to: EWGREGVNQWGFPCPQVIRLRVT*RANTMG
Trigger: GCCCATGGTGTTGGCTCTCAACGTGACCCGCAGTCT...AATAACCTGTGGACAAGGGAAGCCCCACTGATTTACTCCCTCTCTTCCCCACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
3UTR CCA 72 bp CTGCAGTCTCGATTCAGGGTGCTTGGTGTTCCCAGATaGTGTTTGAGGGTCCTGACCCGACCTCATTCTGCT +
Preference number: 3 (lower is better)
Translates to: LQSRFRVLGVPR*CLRVLTRPHSA
Trigger: AGCAGAATGAGGTCGGGTCAGGACCCTCAAACACCATCTGGGAACACCAAGCACCCTGAATCGAGACTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR CAA 90 bp GTTCCCAGATGGTGTTTGAGGGTCCTGACCCGACCTCATTCTGCTATAGCCATCAGGCAGCTGTCTGATTaGGAGACTTGCTCTGTGGCC +
Preference number: 3 (lower is better)
Translates to: VPRWCLRVLTRPHSAIAIRQLSD*ETCSVA
Trigger: GGCCACAGAGCAAGTCTCCAAATCAGACAGCTGCCT...GATGGCTATAGCAGAATGAGGTCGGGTCAGGACCCTCAAACACCATCTGGGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR CAA 90 bp TATAGCCATCAGTCCCCTGCTGTGGCTTTGGGGATCAGAACTTCCCAGCTAGGGTTGACACAGTGGTATTaGTGGCGTATCTGGCGCTTG +
Preference number: 3 (lower is better)
Translates to: YSHQSPAVALGIRTSQLGLTQWY*WRIWRL
Trigger: CAAGCGCCAGATACGCCACAAATACCACTGTGTCAA...CCCTAGCTGGGAAGTTCTGATCCCCAAAGCCACAGCAGGGGACTGATGGCTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR CAA 90 bp TGGATGACGGTGCTCAGAGAGAGGATTTGGGTCCTGCGGGAGGTGACAGCTGTTTCAGTGGGGCTTCCCTaGTCCACAGGTTATTTAGAA +
Preference number: 3 (lower is better)
Translates to: WMTVLRERIWVLREVTAVSVGLP*STGYLE
Trigger: TTCTAAATAACCTGTGGACAAGGGAAGCCCCACTGA...AACAGCTGTCACCTCCCGCAGGACCCAAATCCTCTCTCTGAGCACCGTCATCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR CCA 72 bp GCAAGTACTATCTTGATTCAACCCAGGGGCCGACAATaGACTGCAGCCCAGGGTAAGTCCAGCAGTTTTGCA +
Preference number: 3 (lower is better)
Translates to: ASTILIQPRGRQ*TAAQGKSSSFA
Trigger: TGCAAAACTGCTGGACTTACCCTGGGCTGCAGTCCATTGTCGGCCCCTGGGTTGAATCAAGATAGTACTTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR CAA 90 bp CATCTAGCTGCAAGTACTATCTTGATTCAACCCAGGGGCCGACAATGGACTGCAACTGAGAGGGGACACTaGTGGCCAGCAGTGTATCTC +
Preference number: 3 (lower is better)
Translates to: HLAASTILIQPRGRQWTATERGH*WPAVYL
Trigger: GAGATACACTGCTGGCCACAAGTGTCCCCTCTCAGT...TGCAGTCCATTGTCGGCCCCTGGGTTGAATCAAGATAGTACTTGCAGCTAGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR CAA 90 bp GAGTGGGGAAGAGAGGGAGTAAATCAGTGGGGCTTCCCTTGTCCACAGGTTATTTTGACACAGTGGTATTaGTGGCGTATCTGGCGCTTG +
Preference number: 3 (lower is better)
Translates to: EWGREGVNQWGFPCPQVILTQWY*WRIWRL
Trigger: CAAGCGCCAGATACGCCACAAATACCACTGTGTCAA...AATAACCTGTGGACAAGGGAAGCCCCACTGATTTACTCCCTCTCTTCCCCACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
3UTR-3UTR CAA 90 bp CATCTAGCTGCAAGTACTATCTTGATTCAACCCAGGGGCCGACAATGGACTGCACTCGATTCAGGGTGCTaGGTGTTCCCAGATGGTGTT +
Preference number: 3 (lower is better)
Translates to: HLAASTILIQPRGRQWTALDSGC*VFPDGV
Trigger: AACACCATCTGGGAACACCAAGCACCCTGAATCGAG...TGCAGTCCATTGTCGGCCCCTGGGTTGAATCAAGATAGTACTTGCAGCTAGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp GGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGGCATCTGGGGCCGGATaGCCTCCTCGTCCCCGCCGC +
Preference number: 4 (lower is better)
Translates to: GAGADTTGPPPSTRKAGGASGAG*PPRPRR
Trigger: GCGGCGGGGACGAGGAGGCCATCCGGCCCCAGATGC...CCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CCA 90 bp GGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGTGTGCCCCAGACGCCTaGTCCCGCTGCCCGGGTGGC +
Preference number: 4 (lower is better)
Translates to: GAGADTTGPPPSTRKAGGCAPDA*SRCPGG
Trigger: GCCACCCGGGCAGCGGGACCAGGCGTCTGGGGCACA...CCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374893.11
CDS-3UTR GCA 90 bp ATCCCAAGGTGGCAGGGGTGTCCCTGTGCCGTCTGCTTCCTCTCGGGCAGGAGGTGCTCCCAGCCCAGCTaGTCGGACGGCTCGGCTGCC +
Preference number: 4 (lower is better)
Translates to: IPRWQGCPCAVCFLSGRRCSQPS*SDGSAA
Trigger: GGCAGCCGAGCCGTCCGAGCAGCTGGGCTGGGAGCA...CCTCCTGCCCGAGAGGAAGCAGACGGCACAGGGACACCCCTGCCACCTTGGGAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415912.6
CDS-3UTR CCA 90 bp CCGGCAGACCTGAGCCATGAGTGTGGTCTCCATTCCCTCGGGCTGCACCCCCAGGCAGCCCAGCACCTCTaGCCACTCCGGGGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: PADLSHECGLHSLGLHPQAAQHL*PLRGLW
Trigger: CCACAGCCCCCGGAGTGGCCAGAGGTGCTGGGCTGC...CTGGGGGTGCAGCCCGAGGGAATGGAGACCACACTCATGGCTCAGGTCTGCCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CCA 90 bp GCGCACACGTGTGCCTGGGATGTCCGGCTCTTCACAGGGGATCAGACTGCGGGTGCATCTGGGGCCGGATaGCCTCCTCGTCCCCGCCGC +
Preference number: 4 (lower is better)
Translates to: AHTCAWDVRLFTGDQTAGASGAG*PPRPRR
Trigger: GCGGCGGGGACGAGGAGGCCATCCGGCCCCAGATGC...ACCCGCAGTCTGATCCCCTGTGAAGAGCCGGACATCCCAGGCACACGTGTGCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp CCCATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGCATCTGGGGCCGGATaGCCTCCTCGTCCCCGCCGC +
Preference number: 4 (lower is better)
Translates to: PMVLVLTLQDHHPPRGRQASGAG*PPRPRR
Trigger: GCGGCGGGGACGAGGAGGCCATCCGGCCCCAGATGC...CTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CCA 90 bp GGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGTCGGGGCTGGGCCAGGAGGCCTaGGCTGCTGAGGCGGGAAAG +
Preference number: 4 (lower is better)
Translates to: GADTTGPPPSTRKAGGSGLGQEA*AAEAGK
Trigger: CTTTCCCGCCTCAGCAGCCCAGGCCTCCTGGCCCAG...CCCCGACCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp GGGGTGTCCCTGTGCCGTCTGCTTCCTCTCGGGCAGGAGGATTCCAGCTTCCCGCCCGATAGGCCGCCTTaGGACCCCCGTTGTCGGCGA +
Preference number: 4 (lower is better)
Translates to: GVSLCRLLPLGQEDSSFPPDRPP*DPRCRR
Trigger: TCGCCGACAACGGGGGTCTCAAGGCGGCCTATCGGG...CGGGAAGCTGGAATCCTCCTGCCCGAGAGGAAGCAGACGGCACAGGGACACCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp GGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGTCGGGGGGGCTCGGTTCCGGCTaGAAACCCGCCAGTGTGAGG +
Preference number: 4 (lower is better)
Translates to: GADTTGPPPSTRKAGGSGGLGSG*KPASVR
Trigger: CCTCACACTGGCGGGTTTTCAGCCGGAACCGAGCCC...CCCCGACCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACC
68% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp GCGCACACGTGTGCCTGGGATGTCCGGCTCTTCACAGGGGATCAGACTGCGGGTGGAGGCCTGGGCTGCTaGGGCGGGAAAGCGGTGGCT +
Preference number: 4 (lower is better)
Translates to: AHTCAWDVRLFTGDQTAGGGLGC*GGKAVA
Trigger: AGCCACCGCTTTCCCGCCTCAGCAGCCCAGGCCTCC...ACCCGCAGTCTGATCCCCTGTGAAGAGCCGGACATCCCAGGCACACGTGTGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp CAGCTAGGGCTCCCACTGTTGGACTCAGGGGACGGAGGCAGGCTAGCTGAAGGGGGAGGCCTGGGCTGCTaGGGCGGGAAAGCGGTGGCT +
Preference number: 4 (lower is better)
Translates to: QLGLPLLDSGDGGRLAEGGGLGC*GGKAVA
Trigger: AGCCACCGCTTTCCCGCCTCAGCAGCCCAGGCCTCC...CCCTTCAGCTAGCCTGCCTCCGTCCCCTGAGTCCAACAGTGGGAGCCCTAGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp GCTCCTGGGCTCCCGTGGAGGTTAGCCCTGCAGGCACCGGGGAAATGGGGCTATCGGCCCCGGCAGACCTaGGCCATGAGTGTGGTCTCC +
Preference number: 4 (lower is better)
Translates to: APGLPWRLALQAPGKWGYRPRQT*AMSVVS
Trigger: GGAGACCACACTCATGGCTCAGGTCTGCCGGGGCCG...ATAGCCCCATTTCCCCGGTGCCTGCAGGGCTAACCTCCACGGGAGCCCAGGAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp GCCAGAGCTCCTGGGCTCCCGTGGAGGTTAGCCCTGCAGGCACCGGGGAAATGGTGGCCCAGGGATCCGTaGCTCAGCCCAGCCTCACAG +
Preference number: 4 (lower is better)
Translates to: ARAPGLPWRLALQAPGKWWPRDP*LSPASQ
Trigger: CTGTGAGGCTGGGCTGAGGCACGGATCCCTGGGCCA...CCATTTCCCCGGTGCCTGCAGGGCTAACCTCCACGGGAGCCCAGGAGCTCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp CAGCTAGGGCTCCCACTGTTGGACTCAGGGGACGGAGGCAGGCTAGCTGAAGGGACGCCCCGCATGCTGTaGCCCAGACGCCTGGTCCCG +
Preference number: 4 (lower is better)
Translates to: QLGLPLLDSGDGGRLAEGTPRML*PRRLVP
Trigger: CGGGACCAGGCGTCTGGGGCACAGCATGCGGGGCGT...CCCTTCAGCTAGCCTGCCTCCGTCCCCTGAGTCCAACAGTGGGAGCCCTAGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374893.11
CDS-3UTR GCA 90 bp GTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGTGCCACACGCCCCGCATaGTGTGCCCCAGACGCCTGG +
Preference number: 4 (lower is better)
Translates to: VLVLTLQDHHPPRGRQEGATRPA*CAPDAW
Trigger: CCAGGCGTCTGGGGCACAGCATGCGGGGCGTGTGGC...ACCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374893.11
CDS-3UTR GCA 90 bp CCGGCAGACCTGAGCCATGAGTGTGGTCTCCATTCCCTCGGGCTGCACCCCCAGAGGACACCTGGGGGCTaGACTGCGGAGGCCAAGGGC +
Preference number: 4 (lower is better)
Translates to: PADLSHECGLHSLGLHPQRTPGG*TAEAKG
Trigger: GCCCTTGGCCTCCGCAGTGCAGCCCCCAGGTGTCCT...CTGGGGGTGCAGCCCGAGGGAATGGAGACCACACTCATGGCTCAGGTCTGCCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp GGGGATCAGACTGCGGGTCACGTTGAGAGCCAACACCATGGGCTCGGTTCCGGCGTGGAGGGCACGTGCTaGCCCCACCTCCGTCTCGGG +
Preference number: 4 (lower is better)
Translates to: GDQTAGHVESQHHGLGSGVEGTC*PHLRLG
Trigger: CCCGAGACGGAGGTGGGGGCAGCACGTGCCCTCCAC...GCCGGAACCGAGCCCATGGTGTTGGCTCTCAACGTGACCCGCAGTCTGATCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp CCCATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGTGCTCCCAGCCCAGCTaGTCGGACGGCTCGGCTGCC +
Preference number: 4 (lower is better)
Translates to: PMVLVLTLQDHHPPRGRQCSQPS*SDGSAA
Trigger: GGCAGCCGAGCCGTCCGAGCAGCTGGGCTGGGAGCA...CTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATGGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415912.6
ENST00000649812.1
CDS-3UTR GCA 90 bp GGGGTGTCCCTGTGCCGTCTGCTTCCTCTCGGGCAGGAGGATTCCAGCTTCCCGCAGCTCCGGGTTCCCTaGTCCCAGCCCAGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: GVSLCRLLPLGQEDSSFPQLRVP*SQPSCS
Trigger: CGAGCAGCTGGGCTGGGAGCAGGGAACCCGGAGCTG...CGGGAAGCTGGAATCCTCCTGCCCGAGAGGAAGCAGACGGCACAGGGACACCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415912.6
CDS-3UTR GCA 90 bp CCGGCAGACCTGAGCCATGAGTGTGGTCTCCATTCCCTCGGGCTGCACCCCCAGCAGCTCCGGGTTCCCTaGTCCCAGCCCAGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: PADLSHECGLHSLGLHPQQLRVP*SQPSCS
Trigger: CGAGCAGCTGGGCTGGGAGCAGGGAACCCGGAGCTG...CTGGGGGTGCAGCCCGAGGGAATGGAGACCACACTCATGGCTCAGGTCTGCCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CCA 90 bp GCCAGAGCTCCTGGGCTCCCGTGGAGGTTAGCCCTGCAGGCACCGGGGAAATGGCGATGCCCTGTGCCATaGACCTGCCGGCCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: ARAPGLPWRLALQAPGKWRCPVP*TCRPEL
Trigger: GAGCTCTGGCCGGCAGGTCCATGGCACAGGGCATCG...CCATTTCCCCGGTGCCTGCAGGGCTAACCTCCACGGGAGCCCAGGAGCTCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp GCCAGAGCTCCTGGGCTCCCGTGGAGGTTAGCCCTGCAGGCACCGGGGAAATGGGAGGCGGGAAAGCGGTaGCTGTGGAGGGCACGTGCT +
Preference number: 4 (lower is better)
Translates to: ARAPGLPWRLALQAPGKWEAGKR*LWRARA
Trigger: AGCACGTGCCCTCCACAGCCACCGCTTTCCCGCCTC...CCATTTCCCCGGTGCCTGCAGGGCTAACCTCCACGGGAGCCCAGGAGCTCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp CCCATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGCCCGATAGGCCGCCTTaGGACCCCCGTTGTCGGCGA +
Preference number: 4 (lower is better)
Translates to: PMVLVLTLQDHHPPRGRQPDRPP*DPRCRR
Trigger: TCGCCGACAACGGGGGTCTCAAGGCGGCCTATCGGG...CTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR TCA 90 bp GGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGTCGGGGAGAGCTGGTTATTGGTaGGGCCCAGGGTGGGGAGCG +
Preference number: 4 (lower is better)
Translates to: GADTTGPPPSTRKAGGSGRAGYW*GPGWGA
Trigger: CGCTCCCCACCCTGGGCCTCACCAATAACCAGCTCT...CCCCGACCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR TCA 90 bp GCGCACACGTGTGCCTGGGATGTCCGGCTCTTCACAGGGGATCAGACTGCGGGTTGGAGAGGGAGCCGATaGCCCGGAAGCGAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: AHTCAWDVRLFTGDQTAGWRGSR*PGSERG
Trigger: GCCCCTCTCGCTTCCGGGTCATCGGCTCCCTCTCCA...ACCCGCAGTCTGATCCCCTGTGAAGAGCCGGACATCCCAGGCACACGTGTGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp GTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGTTGGAGAGGGAGCCGATaGCCCGGAAGCGAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: VLVLTLQDHHPPRGRQEGWRGSR*PGSERG
Trigger: GCCCCTCTCGCTTCCGGGTCATCGGCTCCCTCTCCA...ACCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR TCA 90 bp GCTCCTGGGCTCCCGTGGAGGTTAGCCCTGCAGGCACCGGGGAAATGGGGCTATAGGCGGGTTCATGGGTaGGCCAGGTGGGCAGCGGAA +
Preference number: 4 (lower is better)
Translates to: APGLPWRLALQAPGKWGYRRVHG*ARWAAE
Trigger: TTCCGCTGCCCACCTGGCTCACCCATGAACCCGCCT...ATAGCCCCATTTCCCCGGTGCCTGCAGGGCTAACCTCCACGGGAGCCCAGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp GCGCACACGTGTGCCTGGGATGTCCGGCTCTTCACAGGGGATCAGACTGCGGGTGGTGGCCAAGCGGGCTaGGCAATGCCCTGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: AHTCAWDVRLFTGDQTAGGGQAG*AMPWRL
Trigger: CAGCCTCCAGGGCATTGCTCAGCCCGCTTGGCCACC...ACCCGCAGTCTGATCCCCTGTGAAGAGCCGGACATCCCAGGCACACGTGTGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp ATCCCAAGGTGGCAGGGGTGTCCCTGTGCCGTCTGCTTCCTCTCGGGCAGGAGGCAGGCCGTTGGGGTATaGGTCGCCCTCGGAGAGCGA +
Preference number: 4 (lower is better)
Translates to: IPRWQGCPCAVCFLSGRRQAVGV*VALGER
Trigger: TCGCTCTCCGAGGGCGACGCATACCCCAACGGCCTG...CCTCCTGCCCGAGAGGAAGCAGACGGCACAGGGACACCCCTGCCACCTTGGGAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp CCGGCAGACCTGAGCCATGAGTGTGGTCTCCATTCCCTCGGGCTGCACCCCCAGCAGGCCGTTGGGGTATaGGTCGCCCTCGGAGAGCGA +
Preference number: 4 (lower is better)
Translates to: PADLSHECGLHSLGLHPQQAVGV*VALGER
Trigger: TCGCTCTCCGAGGGCGACGCATACCCCAACGGCCTG...CTGGGGGTGCAGCCCGAGGGAATGGAGACCACACTCATGGCTCAGGTCTGCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR GCA 90 bp GGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGTCGGGGCCAGTTGATGGCGGGTaGCAAGGTCTGCAGCTCGGC +
Preference number: 4 (lower is better)
Translates to: GADTTGPPPSTRKAGGSGPVDGG*QGLQLG
Trigger: GCCGAGCTGCAGACCTTGGCACCCGCCATCAACTGG...CCCCGACCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR GCA 90 bp GGGGATCAGACTGCGGGTCACGTTGAGAGCCAACACCATGGGCTCGGTTCCGGCTTCTCCCCCAGGGTGTaGCGCCCGTTCACCGGCTCC +
Preference number: 4 (lower is better)
Translates to: GDQTAGHVESQHHGLGSGFSPRV*RPFTGS
Trigger: GGAGCCGGTGAACGGGCGGCACACCCTGGGGGAGAA...GCCGGAACCGAGCCCATGGTGTTGGCTCTCAACGTGACCCGCAGTCTGATCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp CATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGTGGAGGGCACGTGCTaGCCCCACCTCCGTCTCGGG +
Preference number: 4 (lower is better)
Translates to: HGAGADTTGPPPSTRKAGVEGTC*PHLRLG
Trigger: CCCGAGACGGAGGTGGGGGCAGCACGTGCCCTCCAC...TCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp CCCATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGCTGTGGAGGGCACGTaGTGCCCCCACCTCCGTCTC +
Preference number: 4 (lower is better)
Translates to: PMVLVLTLQDHHPPRGRQAVEGT*CPHLRL
Trigger: GAGACGGAGGTGGGGGCAGCACGTGCCCTCCACAGC...CTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp GGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGTCGGGGTGTCCCTGTGCCGTCTaGTTCCTCTCGGGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: GADTTGPPPSTRKAGGSGCPCAV*FLSGRR
Trigger: CCTCCTGCCCGAGAGGAAGCAGACGGCACAGGGACA...CCCCGACCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CCA 90 bp GCCAGAGCTCCTGGGCTCCCGTGGAGGTTAGCCCTGCAGGCACCGGGGAAATGGCCTCCTCGTCCAGCGTaGCCCGCTTGTACGTCGACA +
Preference number: 4 (lower is better)
Translates to: ARAPGLPWRLALQAPGKWPPRPA*PACTST
Trigger: TGTCGACGTACAAGCGGGCCACGCTGGACGAGGAGG...CCATTTCCCCGGTGCCTGCAGGGCTAACCTCCACGGGAGCCCAGGAGCTCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp GGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGCCACTCCGGGGGCTGTaGAAGTTCACCTGCAGGCCG +
Preference number: 4 (lower is better)
Translates to: GAGADTTGPPPSTRKAGGPLRGL*KFTCRP
Trigger: CGGCCTGCAGGTGAACTTCCACAGCCCCCGGAGTGG...CCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CCA 90 bp GCTCCTGGGCTCCCGTGGAGGTTAGCCCTGCAGGCACCGGGGAAATGGGGCTATAAGCAGGGCCCCGGGTaGCCAAGCGGGCTGAGCAAT +
Preference number: 4 (lower is better)
Translates to: APGLPWRLALQAPGKWGYKQGPG*PSGLSN
Trigger: ATTGCTCAGCCCGCTTGGCCACCCGGGGCCCTGCTT...ATAGCCCCATTTCCCCGGTGCCTGCAGGGCTAACCTCCACGGGAGCCCAGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp GCCAGAGCTCCTGGGCTCCCGTGGAGGTTAGCCCTGCAGGCACCGGGGAAATGGAGACCCTGGTGTGGCTaGGATGGGGGACTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: ARAPGLPWRLALQAPGKWRPWCG*DGGLLQ
Trigger: CTGCAGCAGTCCCCCATCCCAGCCACACCAGGGTCT...CCATTTCCCCGGTGCCTGCAGGGCTAACCTCCACGGGAGCCCAGGAGCTCTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp GGGGTGTCCCTGTGCCGTCTGCTTCCTCTCGGGCAGGAGGATTCCAGCTTCCCGTGGCCGGACAGACCCTaGTGTGGCTGGGATGGGGGA +
Preference number: 4 (lower is better)
Translates to: GVSLCRLLPLGQEDSSFPWPDRP*CGWDGG
Trigger: TCCCCCATCCCAGCCACACCAGGGTCTGTCCGGCCA...CGGGAAGCTGGAATCCTCCTGCCCGAGAGGAAGCAGACGGCACAGGGACACCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp CTGCACCAGCTTGGAGGCAGATCCCAAGGTGGCAGGGGTGTCCCTGTGCCGTCTGCCGGCCAGAGCTCCTaGGCTCCCGTGGAGGTTAGC +
Preference number: 4 (lower is better)
Translates to: LHQLGGRSQGGRGVPVPSAGQSS*APVEVS
Trigger: GCTAACCTCCACGGGAGCCCAGGAGCTCTGGCCGGC...AGACGGCACAGGGACACCCCTGCCACCTTGGGATCTGCCTCCAAGCTGGTGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp GTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGTCTGGGCCAGGAGGCCTaGGCTGCTGAGGCGGGAAAG +
Preference number: 4 (lower is better)
Translates to: VLVLTLQDHHPPRGRQEGLGQEA*AAEAGK
Trigger: CTTTCCCGCCTCAGCAGCCCAGGCCTCCTGGCCCAG...ACCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp GGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGTCGGGGAGGCAGATCCCAAGGTaGCAGGGGTGTCCCTGTGCC +
Preference number: 4 (lower is better)
Translates to: GADTTGPPPSTRKAGGSGRQIPR*QGCPCA
Trigger: GGCACAGGGACACCCCTGCCACCTTGGGATCTGCCT...CCCCGACCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR TCA 90 bp GTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGTGGACTGGGTTGGCCTTaGTCCAGCCCCCACAGGCGT +
Preference number: 4 (lower is better)
Translates to: VLVLTLQDHHPPRGRQEGGLGWP*SSPHRR
Trigger: ACGCCTGTGGGGGCTGGATCAAGGCCAACCCAGTCC...ACCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR TCA 90 bp CTAGGGCTCCCACTGTTGGACTCAGGGGACGGAGGCAGGCTAGCTGAAGGGGCAGAAGGTCCCCCAGCGTaGGTGGCCATCAGGGACTGG +
Preference number: 4 (lower is better)
Translates to: LGLPLLDSGDGGRLAEGAEGPPA*VAIRDW
Trigger: CCAGTCCCTGATGGCCACTCACGCTGGGGGACCTTC...TGCCCCTTCAGCTAGCCTGCCTCCGTCCCCTGAGTCCAACAGTGGGAGCCCTAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp GGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGTCGGGGGTTCCCAGAGGTTGCTaGAGGTCCCCCAGCGTGAGT +
Preference number: 4 (lower is better)
Translates to: GADTTGPPPSTRKAGGSGVPRGC*RSPSVS
Trigger: ACTCACGCTGGGGGACCTTCAGCAACCTCTGGGAAC...CCCCGACCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR TCA 90 bp GGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGTCGGGGACCATGCACTCGGTCTaGCGCTTGAAGGCCTCCACG +
Preference number: 4 (lower is better)
Translates to: GADTTGPPPSTRKAGGSGTMHSV*RLKAST
Trigger: CGTGGAGGCCTTCAAGCGTCAGACCGAGTGCATGGT...CCCCGACCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR TCA 90 bp CACGTGTGCCTGGGATGTCCGGCTCTTCACAGGGGATCAGACTGCGGGTCACGTCCCGATAGGCCGCCTTaGGACCCCCGTTGTCGGCGA +
Preference number: 4 (lower is better)
Translates to: HVCLGCPALHRGSDCGSRPDRPP*DPRCRR
Trigger: TCGCCGACAACGGGGGTCTCAAGGCGGCCTATCGGG...ACGTGACCCGCAGTCTGATCCCCTGTGAAGAGCCGGACATCCCAGGCACACGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp AGGCAGATCCCAAGGTGGCAGGGGTGTCCCTGTGCCGTCTGCTTCCTCTCGGGCAGAGCTGGTTATTGGTaGGGCCCAGGGTGGGGAGCG +
Preference number: 4 (lower is better)
Translates to: RQIPRWQGCPCAVCFLSGRAGYW*GPGWGA
Trigger: CGCTCCCCACCCTGGGCCTCACCAATAACCAGCTCT...GCCCGAGAGGAAGCAGACGGCACAGGGACACCCCTGCCACCTTGGGATCTGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp GTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGTAGGCGGGTTCATGGGTaGGCCAGGTGGGCAGCGGAA +
Preference number: 4 (lower is better)
Translates to: VLVLTLQDHHPPRGRQEGRRVHG*ARWAAE
Trigger: TTCCGCTGCCCACCTGGCTCACCCATGAACCCGCCT...ACCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR TCA 90 bp CAGCTAGGGCTCCCACTGTTGGACTCAGGGGACGGAGGCAGGCTAGCTGAAGGGGGGCTCGGTTCCGGCTaGAAACCCGCCAGTGTGAGG +
Preference number: 4 (lower is better)
Translates to: QLGLPLLDSGDGGRLAEGGLGSG*KPASVR
Trigger: CCTCACACTGGCGGGTTTTCAGCCGGAACCGAGCCC...CCCTTCAGCTAGCCTGCCTCCGTCCCCTGAGTCCAACAGTGGGAGCCCTAGCTG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp CTAGGGCTCCCACTGTTGGACTCAGGGGACGGAGGCAGGCTAGCTGAAGGGGCACGGAGGCAGGCTAGCTaGAGGGGCAGTGCCCATGAG +
Preference number: 4 (lower is better)
Translates to: LGLPLLDSGDGGRLAEGARRQAS*RGSAHE
Trigger: CTCATGGGCACTGCCCCTTCAGCTAGCCTGCCTCCG...TGCCCCTTCAGCTAGCCTGCCTCCGTCCCCTGAGTCCAACAGTGGGAGCCCTAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp ATCCCAAGGTGGCAGGGGTGTCCCTGTGCCGTCTGCTTCCTCTCGGGCAGGAGGTTCCAGCTTCCCGGGTaGGGGGAGAGCACTGTCCAG +
Preference number: 4 (lower is better)
Translates to: IPRWQGCPCAVCFLSGRRFQLPG*GESTVQ
Trigger: CTGGACAGTGCTCTCCCCTCACCCGGGAAGCTGGAA...CCTCCTGCCCGAGAGGAAGCAGACGGCACAGGGACACCCCTGCCACCTTGGGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp CCGGCAGACCTGAGCCATGAGTGTGGTCTCCATTCCCTCGGGCTGCACCCCCAGTTCCAGCTTCCCGGGTaGGGGGAGAGCACTGTCCAG +
Preference number: 4 (lower is better)
Translates to: PADLSHECGLHSLGLHPQFQLPG*GESTVQ
Trigger: CTGGACAGTGCTCTCCCCTCACCCGGGAAGCTGGAA...CTGGGGGTGCAGCCCGAGGGAATGGAGACCACACTCATGGCTCAGGTCTGCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR TCA 90 bp CAAGCCCATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGCGGCCCCGGCAGACCTaGGCCATGAGTGTGGTCTCC +
Preference number: 4 (lower is better)
Translates to: QAHGAGADTTGPPPSTRKRPRQT*AMSVVS
Trigger: GGAGACCACACTCATGGCTCAGGTCTGCCGGGGCCG...CTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATGGGCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR GCA 90 bp GGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGCTGGATGCCCAGTGCTaGCAAGCAGGCCACCAGTCC +
Preference number: 4 (lower is better)
Translates to: GAGADTTGPPPSTRKAGGLDAQC*QAGHQS
Trigger: GGACTGGTGGCCTGCTTGGCAGCACTGGGCATCCAG...CCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR GCA 90 bp CCGGCAGACCTGAGCCATGAGTGTGGTCTCCATTCCCTCGGGCTGCACCCCCAGCTGGATGCCCAGTGCTaGCAAGCAGGCCACCAGTCC +
Preference number: 4 (lower is better)
Translates to: PADLSHECGLHSLGLHPQLDAQC*QAGHQS
Trigger: GGACTGGTGGCCTGCTTGGCAGCACTGGGCATCCAG...CTGGGGGTGCAGCCCGAGGGAATGGAGACCACACTCATGGCTCAGGTCTGCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR GCA 90 bp GGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGTCGGGGTTGCGCCTTTCTCTCTaGCTCGCTCACGCTGGCCGT +
Preference number: 4 (lower is better)
Translates to: GADTTGPPPSTRKAGGSGLRLSL*LAHAGR
Trigger: ACGGCCAGCGTGAGCGAGGCAGAGAGAAAGGCGCAA...CCCCGACCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR GCA 90 bp GGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGTCGGGGTGGGCGGTGACCACCTaGAGGGTGTCCTGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: GADTTGPPPSTRKAGGSGWAVTT*RVSWKL
Trigger: CAACTTCCAGGACACCCTGCAGGTGGTCACCGCCCA...CCCCGACCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR GCA 90 bp GGGGTGTCCCTGTGCCGTCTGCTTCCTCTCGGGCAGGAGGATTCCAGCTTCCCGCCAGTTGATGGCGGGTaGCAAGGTCTGCAGCTCGGC +
Preference number: 4 (lower is better)
Translates to: GVSLCRLLPLGQEDSSFPPVDGG*QGLQLG
Trigger: GCCGAGCTGCAGACCTTGGCACCCGCCATCAACTGG...CGGGAAGCTGGAATCCTCCTGCCCGAGAGGAAGCAGACGGCACAGGGACACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp CCGGCAGACCTGAGCCATGAGTGTGGTCTCCATTCCCTCGGGCTGCACCCCCAGGCGTGTGTAGAATGGTaGCTGCAGGATCCCGGCCGG +
Preference number: 4 (lower is better)
Translates to: PADLSHECGLHSLGLHPQACVEW*LQDPGR
Trigger: CCGGCCGGGATCCTGCAGGCACCATTCTACACACGC...CTGGGGGTGCAGCCCGAGGGAATGGAGACCACACTCATGGCTCAGGTCTGCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR GCA 90 bp CAAGCCCATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGTTCTCCCCCAGGGTGTaGCGCCCGTTCACCGGCTCC +
Preference number: 4 (lower is better)
Translates to: QAHGAGADTTGPPPSTRKFSPRV*RPFTGS
Trigger: GGAGCCGGTGAACGGGCGGCACACCCTGGGGGAGAA...CTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATGGGCTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR GCA 90 bp CCGGCAGACCTGAGCCATGAGTGTGGTCTCCATTCCCTCGGGCTGCACCCCCAGGGGAGCTCTCAGGTGTaGGGACGGAGCACCAGACCT +
Preference number: 4 (lower is better)
Translates to: PADLSHECGLHSLGLHPQGSSQV*GRSTRP
Trigger: AGGTCTGGTGCTCCGTCCGCACACCTGAGAGCTCCC...CTGGGGGTGCAGCCCGAGGGAATGGAGACCACACTCATGGCTCAGGTCTGCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR GCA 90 bp CCGGCAGACCTGAGCCATGAGTGTGGTCTCCATTCCCTCGGGCTGCACCCCCAGAGCCCAGCACCCGAATaGCTGCTGAAGGTGGCGCAC +
Preference number: 4 (lower is better)
Translates to: PADLSHECGLHSLGLHPQSPAPE*LLKVAH
Trigger: GTGCGCCACCTTCAGCAGGCATTCGGGTGCTGGGCT...CTGGGGGTGCAGCCCGAGGGAATGGAGACCACACTCATGGCTCAGGTCTGCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp CAGCTAGGGCTCCCACTGTTGGACTCAGGGGACGGAGGCAGGCTAGCTGAAGGGTGGCCCAGGGATCCGTaGCTCAGCCCAGCCTCACAG +
Preference number: 4 (lower is better)
Translates to: QLGLPLLDSGDGGRLAEGWPRDP*LSPASQ
Trigger: CTGTGAGGCTGGGCTGAGGCACGGATCCCTGGGCCA...CCCTTCAGCTAGCCTGCCTCCGTCCCCTGAGTCCAACAGTGGGAGCCCTAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp CAGCTAGGGCTCCCACTGTTGGACTCAGGGGACGGAGGCAGGCTAGCTGAAGGGGGGATGGGGGACTGCTaGAGAGAGGTAACGGGCCCC +
Preference number: 4 (lower is better)
Translates to: QLGLPLLDSGDGGRLAEGGMGDC*REVTGP
Trigger: GGGGCCCGTTACCTCTCTGCAGCAGTCCCCCATCCC...CCCTTCAGCTAGCCTGCCTCCGTCCCCTGAGTCCAACAGTGGGAGCCCTAGCTG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp GCGCACACGTGTGCCTGGGATGTCCGGCTCTTCACAGGGGATCAGACTGCGGGTGGGATGGGGGACTGCTaGAGAGAGGTAACGGGCCCC +
Preference number: 4 (lower is better)
Translates to: AHTCAWDVRLFTGDQTAGGMGDC*REVTGP
Trigger: GGGGCCCGTTACCTCTCTGCAGCAGTCCCCCATCCC...ACCCGCAGTCTGATCCCCTGTGAAGAGCCGGACATCCCAGGCACACGTGTGCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp CCCGAATGCCTGCTGAAGGTGGCGCACACGTGTGCCTGGGATGTCCGGCTCTTCGGGATGGGGGACTGCTaGAGAGAGGTAACGGGCCCC +
Preference number: 4 (lower is better)
Translates to: PECLLKVAHTCAWDVRLFGMGDC*REVTGP
Trigger: GGGGCCCGTTACCTCTCTGCAGCAGTCCCCCATCCC...GAAGAGCCGGACATCCCAGGCACACGTGTGCGCCACCTTCAGCAGGCATTCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp ATCCCAAGGTGGCAGGGGTGTCCCTGTGCCGTCTGCTTCCTCTCGGGCAGGAGGGCTGGGATGGGGGACTaGTGCAGAGAGGTAACGGGC +
Preference number: 4 (lower is better)
Translates to: IPRWQGCPCAVCFLSGRRAGMGD*CREVTG
Trigger: GCCCGTTACCTCTCTGCAGCAGTCCCCCATCCCAGC...CCTCCTGCCCGAGAGGAAGCAGACGGCACAGGGACACCCCTGCCACCTTGGGAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp GCTCCTGGGCTCCCGTGGAGGTTAGCCCTGCAGGCACCGGGGAAATGGGGCTATACCTGGGGGCTGCACTaGGGAGGCCAAGGGCATCTA +
Preference number: 4 (lower is better)
Translates to: APGLPWRLALQAPGKWGYTWGLH*GGQGHL
Trigger: TAGATGCCCTTGGCCTCCGCAGTGCAGCCCCCAGGT...ATAGCCCCATTTCCCCGGTGCCTGCAGGGCTAACCTCCACGGGAGCCCAGGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp CGATACCCTGCACCAGCTTGGAGGCAGATCCCAAGGTGGCAGGGGTGTCCCTGTAGGACACCTGGGGGCTaGACTGCGGAGGCCAAGGGC +
Preference number: 4 (lower is better)
Translates to: RYPAPAWRQIPRWQGCPCRTPGG*TAEAKG
Trigger: GCCCTTGGCCTCCGCAGTGCAGCCCCCAGGTGTCCT...ACAGGGACACCCCTGCCACCTTGGGATCTGCCTCCAAGCTGGTGCAGGGTATCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp AGGCAGATCCCAAGGTGGCAGGGGTGTCCCTGTGCCGTCTGCTTCCTCTCGGGCTCTTCCGATGCCCTGTaGCATGGACCTGCCGGCCAG +
Preference number: 4 (lower is better)
Translates to: RQIPRWQGCPCAVCFLSGSSDAL*HGPAGQ
Trigger: CTGGCCGGCAGGTCCATGGCACAGGGCATCGGAAGA...GCCCGAGAGGAAGCAGACGGCACAGGGACACCCCTGCCACCTTGGGATCTGCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp GGGGATCAGACTGCGGGTCACGTTGAGAGCCAACACCATGGGCTCGGTTCCGGCGCAGGGGTGTCCCTGTaGCGTCTGCTTCCTCTCGGG +
Preference number: 4 (lower is better)
Translates to: GDQTAGHVESQHHGLGSGAGVSL*RLLPLG
Trigger: CCCGAGAGGAAGCAGACGGCACAGGGACACCCCTGC...GCCGGAACCGAGCCCATGGTGTTGGCTCTCAACGTGACCCGCAGTCTGATCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp CCGGCAGACCTGAGCCATGAGTGTGGTCTCCATTCCCTCGGGCTGCACCCCCAGTCCATTCCCTCGGGCTaGACCCCCAGCCCTAGGACA +
Preference number: 4 (lower is better)
Translates to: PADLSHECGLHSLGLHPQSIPSG*TPSPRT
Trigger: TGTCCTAGGGCTGGGGGTGCAGCCCGAGGGAATGGA...CTGGGGGTGCAGCCCGAGGGAATGGAGACCACACTCATGGCTCAGGTCTGCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CCA 90 bp CTAGGGCTCCCACTGTTGGACTCAGGGGACGGAGGCAGGCTAGCTGAAGGGGCACCACTCCGGGGGCTGTaGAAGTTCACCTGCAGGCCG +
Preference number: 4 (lower is better)
Translates to: LGLPLLDSGDGGRLAEGAPLRGL*KFTCRP
Trigger: CGGCCTGCAGGTGAACTTCCACAGCCCCCGGAGTGG...TGCCCCTTCAGCTAGCCTGCCTCCGTCCCCTGAGTCCAACAGTGGGAGCCCTAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp GGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGTCGGGGGTGGCCATCAGGGACTaGGTTGGCCTTGATCCAGCC +
Preference number: 4 (lower is better)
Translates to: GADTTGPPPSTRKAGGSGVAIRD*VGLDPA
Trigger: GGCTGGATCAAGGCCAACCCAGTCCCTGATGGCCAC...CCCCGACCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CCA 90 bp GGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGTCGGGGCTGCCTCGCTCACGCTaGCCGTGGAGTTTTCGAGGA +
Preference number: 4 (lower is better)
Translates to: GADTTGPPPSTRKAGGSGLPRSR*PWSFRG
Trigger: TCCTCGAAAACTCCACGGCCAGCGTGAGCGAGGCAG...CCCCGACCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CCA 90 bp GTATTTGTGGCGTATCTGGCGCTTGTCAGTGTGGGGCCCAGGCCTGATGAGCCAGCATCTGGGGCCGGATaGCCTCCTCGTCCCCGCCGC +
Preference number: 4 (lower is better)
Translates to: VFVAYLALVSVGPRPDEPASGAG*PPRPRR
Trigger: GCGGCGGGGACGAGGAGGCCATCCGGCCCCAGATGC...TGGCTCATCAGGCCTGGGCCCCACACTGACAAGCGCCAGATACGCCACAAATAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp GGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGTCGGGGGGAGCGTGTGTAGAATaGTGCCTGCAGGATCCCGGC +
Preference number: 4 (lower is better)
Translates to: GADTTGPPPSTRKAGGSGGACVE*CLQDPG
Trigger: GCCGGGATCCTGCAGGCACCATTCTACACACGCTCC...CCCCGACCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CCA 90 bp CCGGCAGACCTGAGCCATGAGTGTGGTCTCCATTCCCTCGGGCTGCACCCCCAGTGTGAGGCGGGTTCATaGGTGAGCCAGGTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: PADLSHECGLHSLGLHPQCEAGS*VSQVGS
Trigger: GCTGCCCACCTGGCTCACCCATGAACCCGCCTCACA...CTGGGGGTGCAGCCCGAGGGAATGGAGACCACACTCATGGCTCAGGTCTGCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CCA 90 bp GGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGTCGGGGCAATGCCCTGGAGGCTaGATGGGGGTCTCGTCCTCA +
Preference number: 4 (lower is better)
Translates to: GADTTGPPPSTRKAGGSGQCPGG*MGVSSS
Trigger: TGAGGACGAGACCCCCATCCAGCCTCCAGGGCATTG...CCCCGACCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp CCCGAATGCCTGCTGAAGGTGGCGCACACGTGTGCCTGGGATGTCCGGCTCTTCTGGCCGGACAGACCCTaGTGTGGCTGGGATGGGGGA +
Preference number: 4 (lower is better)
Translates to: PECLLKVAHTCAWDVRLFWPDRP*CGWDGG
Trigger: TCCCCCATCCCAGCCACACCAGGGTCTGTCCGGCCA...GAAGAGCCGGACATCCCAGGCACACGTGTGCGCCACCTTCAGCAGGCATTCGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp CCCATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGCTGTCTCCTTGGGGTaGAGACTGGCGGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: PMVLVLTLQDHHPPRGRQAVSLG*RLAAAA
Trigger: GGCTGCAGCCGCCAGTCTCCACCCCAAGGAGACAGC...CTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp GGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGTCGGGGCAGGCACCGGGGAAATaGGGCTATGGCCTGTGCTTC +
Preference number: 4 (lower is better)
Translates to: GADTTGPPPSTRKAGGSGQAPGK*GYGLCF
Trigger: GAAGCACAGGCCATAGCCCCATTTCCCCGGTGCCTG...CCCCGACCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp CAGCTAGGGCTCCCACTGTTGGACTCAGGGGACGGAGGCAGGCTAGCTGAAGGGGCTCCTGGGCTCCCGTaGAGGTTAGCCCTGCAGGCA +
Preference number: 4 (lower is better)
Translates to: QLGLPLLDSGDGGRLAEGAPGLP*RLALQA
Trigger: TGCCTGCAGGGCTAACCTCCACGGGAGCCCAGGAGC...CCCTTCAGCTAGCCTGCCTCCGTCCCCTGAGTCCAACAGTGGGAGCCCTAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp GTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGTGGCTTCCCCACTGGATaGCAGAGGCCGCTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: VLVLTLQDHHPPRGRQEGGFPTG*QRPLQV
Trigger: CACCTGGAGCGGCCTCTGCCATCCAGTGGGGAAGCC...ACCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp CTAGGGCTCCCACTGTTGGACTCAGGGGACGGAGGCAGGCTAGCTGAAGGGGCACTCCGTCTCGGGGCCTaGCTTCCCCACTGGATGGCA +
Preference number: 4 (lower is better)
Translates to: LGLPLLDSGDGGRLAEGALRLGA*LPHWMA
Trigger: TGCCATCCAGTGGGGAAGCCAGGCCCCGAGACGGAG...TGCCCCTTCAGCTAGCCTGCCTCCGTCCCCTGAGTCCAACAGTGGGAGCCCTAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp GCGCACACGTGTGCCTGGGATGTCCGGCTCTTCACAGGGGATCAGACTGCGGGTCTCCGTCTCGGGGCCTaGCTTCCCCACTGGATGGCA +
Preference number: 4 (lower is better)
Translates to: AHTCAWDVRLFTGDQTAGLRLGA*LPHWMA
Trigger: TGCCATCCAGTGGGGAAGCCAGGCCCCGAGACGGAG...ACCCGCAGTCTGATCCCCTGTGAAGAGCCGGACATCCCAGGCACACGTGTGCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp GGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGAGGCAGATCCCAAGGTaGCAGGGGTGTCCCTGTGCC +
Preference number: 4 (lower is better)
Translates to: GAGADTTGPPPSTRKAGGRQIPR*QGCPCA
Trigger: GGCACAGGGACACCCCTGCCACCTTGGGATCTGCCT...CCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CCA 90 bp ATCCCAAGGTGGCAGGGGTGTCCCTGTGCCGTCTGCTTCCTCTCGGGCAGGAGGGAGAAGCCAGCCCTATaGCTCCCCAGGCCTAAGGGG +
Preference number: 4 (lower is better)
Translates to: IPRWQGCPCAVCFLSGRREKPAL*LPRPKG
Trigger: CCCCTTAGGCCTGGGGAGCCATAGGGCTGGCTTCTC...CCTCCTGCCCGAGAGGAAGCAGACGGCACAGGGACACCCCTGCCACCTTGGGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp CCGGCAGACCTGAGCCATGAGTGTGGTCTCCATTCCCTCGGGCTGCACCCCCAGCTGGGCCAGGAGGCCTaGGCTGCAGACTTCGCACTT +
Preference number: 4 (lower is better)
Translates to: PADLSHECGLHSLGLHPQLGQEA*AADFAL
Trigger: AAGTGCGAAGTCTGCAGCCCAGGCCTCCTGGCCCAG...CTGGGGGTGCAGCCCGAGGGAATGGAGACCACACTCATGGCTCAGGTCTGCCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000649812.1
CDS-3UTR TCA 90 bp CGATACCCTGCACCAGCTTGGAGGCAGATCCCAAGGTGGCAGGGGTGTCCCTGTGGACTGGGTTGGCCTTaGTCCAGCCCCCACAGGCGT +
Preference number: 4 (lower is better)
Translates to: RYPAPAWRQIPRWQGCPCGLGWP*SSPHRR
Trigger: ACGCCTGTGGGGGCTGGATCAAGGCCAACCCAGTCC...ACAGGGACACCCCTGCCACCTTGGGATCTGCCTCCAAGCTGGTGCAGGGTATCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp CATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGACTGGGTTGGCCTTaGTCCAGCCCCCACAGGCGT +
Preference number: 4 (lower is better)
Translates to: HGAGADTTGPPPSTRKAGGLGWP*SSPHRR
Trigger: ACGCCTGTGGGGGCTGGATCAAGGCCAACCCAGTCC...TCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR TCA 90 bp CAAGCCCATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGAAGGTCCCCCAGCGTaGGTGGCCATCAGGGACTGG +
Preference number: 4 (lower is better)
Translates to: QAHGAGADTTGPPPSTRKEGPPA*VAIRDW
Trigger: CCAGTCCCTGATGGCCACTCACGCTGGGGGACCTTC...CTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATGGGCTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR TCA 90 bp GGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGTCGGGGACTCGGTCTGACGCTTaGAGGCCTCCACGGATGAGT +
Preference number: 4 (lower is better)
Translates to: GADTTGPPPSTRKAGGSGTRSDA*RPPRMS
Trigger: ACTCATCCGTGGAGGCCTTCAAGCGTCAGACCGAGT...CCCCGACCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR TCA 90 bp CTGCACCAGCTTGGAGGCAGATCCCAAGGTGGCAGGGGTGTCCCTGTGCCGTCTAGAGCTGGTTATTGGTaGGGCCCAGGGTGGGGAGCG +
Preference number: 4 (lower is better)
Translates to: LHQLGGRSQGGRGVPVPSRAGYW*GPGWGA
Trigger: CGCTCCCCACCCTGGGCCTCACCAATAACCAGCTCT...AGACGGCACAGGGACACCCCTGCCACCTTGGGATCTGCCTCCAAGCTGGTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp GGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGTCGGGGCAGACTTCGCACTTGTaGGGCGGGTTCATGGGTGAG +
Preference number: 4 (lower is better)
Translates to: GADTTGPPPSTRKAGGSGQTSHL*GGFMGE
Trigger: CTCACCCATGAACCCGCCTCACAAGTGCGAAGTCTG...CCCCGACCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR TCA 90 bp GTCTCCTCTGCAGAGCTACCAGGACTGCTGCGTGCTGGGACCAGGACCTCCATCGGGCTCGGTTCCGGCTaGAAACCCGCCAGTGTGAGG +
Preference number: 4 (lower is better)
Translates to: VSSAELPGLLRAGTRTSIGLGSG*KPASVR
Trigger: CCTCACACTGGCGGGTTTTCAGCCGGAACCGAGCCC...GATGGAGGTCCTGGTCCCAGCACGCAGCAGTCCTGGTAGCTCTGCAGAGGAGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp GGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGGACTGCGGGTCACGTTaGGAGCCAACACCATGGGCT +
Preference number: 4 (lower is better)
Translates to: GAGADTTGPPPSTRKAGGDCGSR*EPTPWA
Trigger: AGCCCATGGTGTTGGCTCTCAACGTGACCCGCAGTC...CCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp GCTCCTGGGCTCCCGTGGAGGTTAGCCCTGCAGGCACCGGGGAAATGGGGCTATACTCCTGACCTCAGGTaGTCCGCCCACCTCAACCTC +
Preference number: 4 (lower is better)
Translates to: APGLPWRLALQAPGKWGYTPDLR*SAHLNL
Trigger: GAGGTTGAGGTGGGCGGATCACCTGAGGTCAGGAGT...ATAGCCCCATTTCCCCGGTGCCTGCAGGGCTAACCTCCACGGGAGCCCAGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp CATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGACAGGCCGTTGGGGTATaGGTCGCCCTCGGAGAGCGA +
Preference number: 4 (lower is better)
Translates to: HGAGADTTGPPPSTRKAGQAVGV*VALGER
Trigger: TCGCTCTCCGAGGGCGACGCATACCCCAACGGCCTG...TCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR GCA 90 bp GGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGTCGGGGCGGTGGCTATGCTCTTaGTGTCCTCGGCGAAGGTTG +
Preference number: 4 (lower is better)
Translates to: GADTTGPPPSTRKAGGSGRWLCS*CPRRRL
Trigger: CAACCTTCGCCGAGGACAGCAAGAGCATAGCCACCG...CCCCGACCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR GCA 90 bp CCCGAATGCCTGCTGAAGGTGGCGCACACGTGTGCCTGGGATGTCCGGCTCTTCGCGTGTGTAGAATGGTaGCTGCAGGATCCCGGCCGG +
Preference number: 4 (lower is better)
Translates to: PECLLKVAHTCAWDVRLFACVEW*LQDPGR
Trigger: CCGGCCGGGATCCTGCAGGCACCATTCTACACACGC...GAAGAGCCGGACATCCCAGGCACACGTGTGCGCCACCTTCAGCAGGCATTCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp CTGCACCAGCTTGGAGGCAGATCCCAAGGTGGCAGGGGTGTCCCTGTGCCGTCTGCGTGTGTAGAATGGTaGCTGCAGGATCCCGGCCGG +
Preference number: 4 (lower is better)
Translates to: LHQLGGRSQGGRGVPVPSACVEW*LQDPGR
Trigger: CCGGCCGGGATCCTGCAGGCACCATTCTACACACGC...AGACGGCACAGGGACACCCCTGCCACCTTGGGATCTGCCTCCAAGCTGGTGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp GTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGTGCGTGTGTAGAATGGTaGCTGCAGGATCCCGGCCGG +
Preference number: 4 (lower is better)
Translates to: VLVLTLQDHHPPRGRQEGACVEW*LQDPGR
Trigger: CCGGCCGGGATCCTGCAGGCACCATTCTACACACGC...ACCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR GCA 90 bp GGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGAGGGTGGGGAGCGAGTaGTCAGCCCCGTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: GAGADTTGPPPSTRKAGGRVGSE*SAPFFF
Trigger: GAAGAAGAACGGGGCTGAGCACTCGCTCCCCACCCT...CCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR GCA 90 bp CCCGAATGCCTGCTGAAGGTGGCGCACACGTGTGCCTGGGATGTCCGGCTCTTCGGTGGCGCACACGTGTaGCTGGGATGTCCGGCTCTT +
Preference number: 4 (lower is better)
Translates to: PECLLKVAHTCAWDVRLFGGAHV*LGCPAL
Trigger: AAGAGCCGGACATCCCAGGCACACGTGTGCGCCACC...GAAGAGCCGGACATCCCAGGCACACGTGTGCGCCACCTTCAGCAGGCATTCGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp GGGGATCAGACTGCGGGTCACGTTGAGAGCCAACACCATGGGCTCGGTTCCGGCGCTGGGATGGGGGACTaGTGCAGAGAGGTAACGGGC +
Preference number: 4 (lower is better)
Translates to: GDQTAGHVESQHHGLGSGAGMGD*CREVTG
Trigger: GCCCGTTACCTCTCTGCAGCAGTCCCCCATCCCAGC...GCCGGAACCGAGCCCATGGTGTTGGCTCTCAACGTGACCCGCAGTCTGATCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp GTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGTACCTGGGGGCTGCACTaGGGAGGCCAAGGGCATCTA +
Preference number: 4 (lower is better)
Translates to: VLVLTLQDHHPPRGRQEGTWGLH*GGQGHL
Trigger: TAGATGCCCTTGGCCTCCGCAGTGCAGCCCCCAGGT...ACCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp CCCATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGTGTCCCTGTGCCGTCTaGTTCCTCTCGGGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: PMVLVLTLQDHHPPRGRQCPCAV*FLSGRR
Trigger: CCTCCTGCCCGAGAGGAAGCAGACGGCACAGGGACA...CTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR GCA 90 bp CATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGCAGGGGTGTCCCTGTaGCGTCTGCTTCCTCTCGGG +
Preference number: 4 (lower is better)
Translates to: HGAGADTTGPPPSTRKAGAGVSL*RLLPLG
Trigger: CCCGAGAGGAAGCAGACGGCACAGGGACACCCCTGC...TCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR GCA 90 bp ATCCCAAGGTGGCAGGGGTGTCCCTGTGCCGTCTGCTTCCTCTCGGGCAGGAGGCAGAGCTACCAGGACTaGTGCGTGCTGGGACCAGGA +
Preference number: 4 (lower is better)
Translates to: IPRWQGCPCAVCFLSGRRQSYQD*CVLGPG
Trigger: TCCTGGTCCCAGCACGCAGCAGTCCTGGTAGCTCTG...CCTCCTGCCCGAGAGGAAGCAGACGGCACAGGGACACCCCTGCCACCTTGGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp CCGGCAGACCTGAGCCATGAGTGTGGTCTCCATTCCCTCGGGCTGCACCCCCAGCAGAGCTACCAGGACTaGTGCGTGCTGGGACCAGGA +
Preference number: 4 (lower is better)
Translates to: PADLSHECGLHSLGLHPQQSYQD*CVLGPG
Trigger: TCCTGGTCCCAGCACGCAGCAGTCCTGGTAGCTCTG...CTGGGGGTGCAGCCCGAGGGAATGGAGACCACACTCATGGCTCAGGTCTGCCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR GCA 90 bp CTGCACCAGCTTGGAGGCAGATCCCAAGGTGGCAGGGGTGTCCCTGTGCCGTCTTCCATTCCCTCGGGCTaGACCCCCAGCCCTAGGACA +
Preference number: 4 (lower is better)
Translates to: LHQLGGRSQGGRGVPVPSSIPSG*TPSPRT
Trigger: TGTCCTAGGGCTGGGGGTGCAGCCCGAGGGAATGGA...AGACGGCACAGGGACACCCCTGCCACCTTGGGATCTGCCTCCAAGCTGGTGCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp GTATTTGTGGCGTATCTGGCGCTTGTCAGTGTGGGGCCCAGGCCTGATGAGCCAGCAGCCCAGCACCTCTaGCCACTCCGGGGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: VFVAYLALVSVGPRPDEPAAQHL*PLRGLW
Trigger: CCACAGCCCCCGGAGTGGCCAGAGGTGCTGGGCTGC...TGGCTCATCAGGCCTGGGCCCCACACTGACAAGCGCCAGATACGCCACAAATAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp CCTGCACCAGCTTGGAGGCAGATCCCAAGGTGGCAGGGGTGTCCCTGTGCCGTCGGCAGGGGTCCACTGTaGGGTCCATGGAGCTCAAGA +
Preference number: 4 (lower is better)
Translates to: PAPAWRQIPRWQGCPCAVGRGPL*GPWSSR
Trigger: TCTTGAGCTCCATGGACCCCACAGTGGACCCCTGCC...GACGGCACAGGGACACCCCTGCCACCTTGGGATCTGCCTCCAAGCTGGTGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp GGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGGGCAGGGGTCCACTGTaGGGTCCATGGAGCTCAAGA +
Preference number: 4 (lower is better)
Translates to: GAGADTTGPPPSTRKAGGGRGPL*GPWSSR
Trigger: TCTTGAGCTCCATGGACCCCACAGTGGACCCCTGCC...CCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CCA 90 bp GGGGATCAGACTGCGGGTCACGTTGAGAGCCAACACCATGGGCTCGGTTCCGGCGTCCCCCAGCGTGAGTaGCCATCAGGGACTGGGTTG +
Preference number: 4 (lower is better)
Translates to: GDQTAGHVESQHHGLGSGVPQRE*PSGTGL
Trigger: CAACCCAGTCCCTGATGGCCACTCACGCTGGGGGAC...GCCGGAACCGAGCCCATGGTGTTGGCTCTCAACGTGACCCGCAGTCTGATCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp CCCATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGTCCCCCAGCGTGAGTaGCCATCAGGGACTGGGTTG +
Preference number: 4 (lower is better)
Translates to: PMVLVLTLQDHHPPRGRQVPQRE*PSGTGL
Trigger: CAACCCAGTCCCTGATGGCCACTCACGCTGGGGGAC...CTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CCA 90 bp ATCCCAAGGTGGCAGGGGTGTCCCTGTGCCGTCTGCTTCCTCTCGGGCAGGAGGCGCTCACGCTGGCCGTaGAGTTTTCGAGGAGGTGCT +
Preference number: 4 (lower is better)
Translates to: IPRWQGCPCAVCFLSGRRRSRWP*SFRGGA
Trigger: AGCACCTCCTCGAAAACTCCACGGCCAGCGTGAGCG...CCTCCTGCCCGAGAGGAAGCAGACGGCACAGGGACACCCCTGCCACCTTGGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp GCTCCTGGGCTCCCGTGGAGGTTAGCCCTGCAGGCACCGGGGAAATGGGGCTATAAGATCTGCTGCATCTaGGGCCGGATGGCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: APGLPWRLALQAPGKWGYKICCI*GRMASS
Trigger: CGAGGAGGCCATCCGGCCCCAGATGCAGCAGATCTT...ATAGCCCCATTTCCCCGGTGCCTGCAGGGCTAACCTCCACGGGAGCCCAGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp CCTGCACCAGCTTGGAGGCAGATCCCAAGGTGGCAGGGGTGTCCCTGTGCCGTCAAGATCTGCTGCATCTaGGGCCGGATGGCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: PAPAWRQIPRWQGCPCAVKICCI*GRMASS
Trigger: CGAGGAGGCCATCCGGCCCCAGATGCAGCAGATCTT...GACGGCACAGGGACACCCCTGCCACCTTGGGATCTGCCTCCAAGCTGGTGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp GGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGAAGATCTGCTGCATCTaGGGCCGGATGGCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: GAGADTTGPPPSTRKAGGKICCI*GRMASS
Trigger: CGAGGAGGCCATCCGGCCCCAGATGCAGCAGATCTT...CCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CCA 90 bp AGGCAGATCCCAAGGTGGCAGGGGTGTCCCTGTGCCGTCTGCTTCCTCTCGGGCGGAGCGTGTGTAGAATaGTGCCTGCAGGATCCCGGC +
Preference number: 4 (lower is better)
Translates to: RQIPRWQGCPCAVCFLSGGACVE*CLQDPG
Trigger: GCCGGGATCCTGCAGGCACCATTCTACACACGCTCC...GCCCGAGAGGAAGCAGACGGCACAGGGACACCCCTGCCACCTTGGGATCTGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp GGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGGGAGCGTGTGTAGAATaGTGCCTGCAGGATCCCGGC +
Preference number: 4 (lower is better)
Translates to: GAGADTTGPPPSTRKAGGGACVE*CLQDPG
Trigger: GCCGGGATCCTGCAGGCACCATTCTACACACGCTCC...CCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CCA 90 bp GGGGTGTCCCTGTGCCGTCTGCTTCCTCTCGGGCAGGAGGATTCCAGCTTCCCGAAGCGAGAGGGGCTGTaGGGATCGGTGATGAGGCCT +
Preference number: 4 (lower is better)
Translates to: GVSLCRLLPLGQEDSSFPKREGL*GSVMRP
Trigger: AGGCCTCATCACCGATCCCCACAGCCCCTCTCGCTT...CGGGAAGCTGGAATCCTCCTGCCCGAGAGGAAGCAGACGGCACAGGGACACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp GCTCCTGGGCTCCCGTGGAGGTTAGCCCTGCAGGCACCGGGGAAATGGGGCTATAAGCGAGAGGGGCTGTaGGGATCGGTGATGAGGCCT +
Preference number: 4 (lower is better)
Translates to: APGLPWRLALQAPGKWGYKREGL*GSVMRP
Trigger: AGGCCTCATCACCGATCCCCACAGCCCCTCTCGCTT...ATAGCCCCATTTCCCCGGTGCCTGCAGGGCTAACCTCCACGGGAGCCCAGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp CTAGGGCTCCCACTGTTGGACTCAGGGGACGGAGGCAGGCTAGCTGAAGGGGCATGTGAGGCGGGTTCATaGGTGAGCCAGGTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: LGLPLLDSGDGGRLAEGACEAGS*VSQVGS
Trigger: GCTGCCCACCTGGCTCACCCATGAACCCGCCTCACA...TGCCCCTTCAGCTAGCCTGCCTCCGTCCCCTGAGTCCAACAGTGGGAGCCCTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp GGGGATCAGACTGCGGGTCACGTTGAGAGCCAACACCATGGGCTCGGTTCCGGCTGTGAGGCGGGTTCATaGGTGAGCCAGGTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: GDQTAGHVESQHHGLGSGCEAGS*VSQVGS
Trigger: GCTGCCCACCTGGCTCACCCATGAACCCGCCTCACA...GCCGGAACCGAGCCCATGGTGTTGGCTCTCAACGTGACCCGCAGTCTGATCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp ATCCCAAGGTGGCAGGGGTGTCCCTGTGCCGTCTGCTTCCTCTCGGGCAGGAGGTCCCCTCCTCCGTCTTaGCTCTCTCCGCTTCGTCCT +
Preference number: 4 (lower is better)
Translates to: IPRWQGCPCAVCFLSGRRSPPPS*LSPLRP
Trigger: AGGACGAAGCGGAGAGAGCCAAGACGGAGGAGGGGA...CCTCCTGCCCGAGAGGAAGCAGACGGCACAGGGACACCCCTGCCACCTTGGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp CAAGCCCATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGAAGCAGGGCCCCGGGTaGCCAAGCGGGCTGAGCAAT +
Preference number: 4 (lower is better)
Translates to: QAHGAGADTTGPPPSTRKKQGPG*PSGLSN
Trigger: ATTGCTCAGCCCGCTTGGCCACCCGGGGCCCTGCTT...CTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATGGGCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp CCTGCACCAGCTTGGAGGCAGATCCCAAGGTGGCAGGGGTGTCCCTGTGCCGTCGCGCACACGTGTGCCTaGGATGTCCGGCTCTTCACA +
Preference number: 4 (lower is better)
Translates to: PAPAWRQIPRWQGCPCAVAHTCA*DVRLFT
Trigger: TGTGAAGAGCCGGACATCCCAGGCACACGTGTGCGC...GACGGCACAGGGACACCCCTGCCACCTTGGGATCTGCCTCCAAGCTGGTGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp GCTCCTGGGCTCCCGTGGAGGTTAGCCCTGCAGGCACCGGGGAAATGGGGCTATGCTCCTCTCTCTGCCTaGCCTCCACACCTCTACTGG +
Preference number: 4 (lower is better)
Translates to: APGLPWRLALQAPGKWGYAPLSA*PPHLYW
Trigger: CCAGTAGAGGTGTGGAGGCCAGGCAGAGAGAGGAGC...ATAGCCCCATTTCCCCGGTGCCTGCAGGGCTAACCTCCACGGGAGCCCAGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp GGGGATCAGACTGCGGGTCACGTTGAGAGCCAACACCATGGGCTCGGTTCCGGCCCTGGGGAAGAGGGTTaGCCGGACAGACCCTGGTGT +
Preference number: 4 (lower is better)
Translates to: GDQTAGHVESQHHGLGSGPGEEG*PDRPWC
Trigger: ACACCAGGGTCTGTCCGGCCAACCCTCTTCCCCAGG...GCCGGAACCGAGCCCATGGTGTTGGCTCTCAACGTGACCCGCAGTCTGATCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp ATCCCAAGGTGGCAGGGGTGTCCCTGTGCCGTCTGCTTCCTCTCGGGCAGGAGGGGCCCAGCCATGTGGTaGATGACGGTGCTCAGAGAG +
Preference number: 4 (lower is better)
Translates to: IPRWQGCPCAVCFLSGRRGPAMW*MTVLRE
Trigger: CTCTCTGAGCACCGTCATCCACCACATGGCTGGGCC...CCTCCTGCCCGAGAGGAAGCAGACGGCACAGGGACACCCCTGCCACCTTGGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp GGGGTGTCCCTGTGCCGTCTGCTTCCTCTCGGGCAGGAGGATTCCAGCTTCCCGCCTTGGGGTGGAGACTaGCGGCTGCAGCCTCAGATA +
Preference number: 4 (lower is better)
Translates to: GVSLCRLLPLGQEDSSFPPWGGD*RLQPQI
Trigger: TATCTGAGGCTGCAGCCGCCAGTCTCCACCCCAAGG...CGGGAAGCTGGAATCCTCCTGCCCGAGAGGAAGCAGACGGCACAGGGACACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp CTGGCCTCCACACCTCTACTGGTCTCCACGCCCTTGCATGAGGTGACAGGAGCTGCCGGCCAGAGCTCCTaGGCTCCCGTGGAGGTTAGC +
Preference number: 4 (lower is better)
Translates to: LASTPLLVSTPLHEVTGAAGQSS*APVEVS
Trigger: GCTAACCTCCACGGGAGCCCAGGAGCTCTGGCCGGC...AGCTCCTGTCACCTCATGCAAGGGCGTGGAGACCAGTAGAGGTGTGGAGGCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp GGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGAGGACTGCTGCGTGCTaGGACCAGGACCTCCATCTG +
Preference number: 4 (lower is better)
Translates to: GAGADTTGPPPSTRKAGGRTAAC*DQDLHL
Trigger: CAGATGGAGGTCCTGGTCCCAGCACGCAGCAGTCCT...CCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CCA 90 bp GTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGTAAGCCCGCCTCTATGTaGCAAGGGGACTGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: VLVLTLQDHHPPRGRQEGKPASM*QGDCGW
Trigger: CCAGCCGCAGTCCCCTTGCCACATAGAGGCGGGCTT...ACCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CCA 90 bp CCGGCAGACCTGAGCCATGAGTGTGGTCTCCATTCCCTCGGGCTGCACCCCCAGAGGGGACACCATGGCTaGGAGAAGCCCGCCTCTATG +
Preference number: 4 (lower is better)
Translates to: PADLSHECGLHSLGLHPQRGHHG*EKPASM
Trigger: CATAGAGGCGGGCTTCTCCCAGCCATGGTGTCCCCT...CTGGGGGTGCAGCCCGAGGGAATGGAGACCACACTCATGGCTCAGGTCTGCCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CCA 90 bp CATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGCAGAGGGGACACCATaGCTGGGAGAAGCCCGCCTC +
Preference number: 4 (lower is better)
Translates to: HGAGADTTGPPPSTRKAGAEGTP*LGEARL
Trigger: GAGGCGGGCTTCTCCCAGCCATGGTGTCCCCTCTGC...TCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CCA 90 bp GCGCACACGTGTGCCTGGGATGTCCGGCTCTTCACAGGGGATCAGACTGCGGGTGAGAAGCCAGCCCTATaGCTCCCCAGGCCTAAGGGG +
Preference number: 4 (lower is better)
Translates to: AHTCAWDVRLFTGDQTAGEKPAL*LPRPKG
Trigger: CCCCTTAGGCCTGGGGAGCCATAGGGCTGGCTTCTC...ACCCGCAGTCTGATCCCCTGTGAAGAGCCGGACATCCCAGGCACACGTGTGCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp GTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGTGAGAAGCCAGCCCTATaGCTCCCCAGGCCTAAGGGG +
Preference number: 4 (lower is better)
Translates to: VLVLTLQDHHPPRGRQEGEKPAL*LPRPKG
Trigger: CCCCTTAGGCCTGGGGAGCCATAGGGCTGGCTTCTC...ACCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR TCA 90 bp GGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGTCGGGGGATGGAGCTGGTCACTaGGACACAAGCTTCGCTCAG +
Preference number: 4 (lower is better)
Translates to: GADTTGPPPSTRKAGGSGDGAGH*DTSFAQ
Trigger: CTGAGCGAAGCTTGTGTCTCAGTGACCAGCTCCATC...CCCCGACCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR TCA 90 bp GCCAGCAGTGTATCTCTGACACAGTCTCACCCCGCAGGGCTCCTGCAGTCTCGAGAAGGTCCCCCAGCGTaGGTGGCCATCAGGGACTGG +
Preference number: 4 (lower is better)
Translates to: ASSVSLTQSHPAGLLQSREGPPA*VAIRDW
Trigger: CCAGTCCCTGATGGCCACTCACGCTGGGGGACCTTC...TCGAGACTGCAGGAGCCCTGCGGGGTGAGACTGTGTCAGAGATACACTGCTGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp GGGGATCAGACTGCGGGTCACGTTGAGAGCCAACACCATGGGCTCGGTTCCGGCGTTCCCAGAGGTTGCTaGAGGTCCCCCAGCGTGAGT +
Preference number: 4 (lower is better)
Translates to: GDQTAGHVESQHHGLGSGVPRGC*RSPSVS
Trigger: ACTCACGCTGGGGGACCTTCAGCAACCTCTGGGAAC...GCCGGAACCGAGCCCATGGTGTTGGCTCTCAACGTGACCCGCAGTCTGATCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp CCGGCAGACCTGAGCCATGAGTGTGGTCTCCATTCCCTCGGGCTGCACCCCCAGTCTCCTGTGGGATGGTaGTGTTGGCCAGTGCCGTCT +
Preference number: 4 (lower is better)
Translates to: PADLSHECGLHSLGLHPQSPVGW*CWPVPS
Trigger: AGACGGCACTGGCCAACATCACCATCCCACAGGAGA...CTGGGGGTGCAGCCCGAGGGAATGGAGACCACACTCATGGCTCAGGTCTGCCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR TCA 90 bp GCTCCTGGGCTCCCGTGGAGGTTAGCCCTGCAGGCACCGGGGAAATGGGGCTATGGGGTCATGCTCCACTaGTCTCTGTTGGGGGCTTTC +
Preference number: 4 (lower is better)
Translates to: APGLPWRLALQAPGKWGYGVMLH*SLLGAF
Trigger: GAAAGCCCCCAACAGAGATCAGTGGAGCATGACCCC...ATAGCCCCATTTCCCCGGTGCCTGCAGGGCTAACCTCCACGGGAGCCCAGGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp CCCATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAAGGCCTCCACGGATaGGTTCTTCCACCATGGCCG +
Preference number: 4 (lower is better)
Translates to: PMVLVLTLQDHHPPRGRQEGLHG*VLPPWP
Trigger: CGGCCATGGTGGAAGAACTCATCCGTGGAGGCCTTC...CTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR TCA 90 bp GTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGTGAAGGCCTCCACGGATaGGTTCTTCCACCATGGCCG +
Preference number: 4 (lower is better)
Translates to: VLVLTLQDHHPPRGRQEGEGLHG*VLPPWP
Trigger: CGGCCATGGTGGAAGAACTCATCCGTGGAGGCCTTC...ACCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR TCA 90 bp GTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGTACCATGCACTCGGTCTaGCGCTTGAAGGCCTCCACG +
Preference number: 4 (lower is better)
Translates to: VLVLTLQDHHPPRGRQEGTMHSV*RLKAST
Trigger: CGTGGAGGCCTTCAAGCGTCAGACCGAGTGCATGGT...ACCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR TCA 90 bp GGGGATCAGACTGCGGGTCACGTTGAGAGCCAACACCATGGGCTCGGTTCCGGCCCGAAAAGGTGGGACTaGGAGGGGACACTTGTGGCC +
Preference number: 4 (lower is better)
Translates to: GDQTAGHVESQHHGLGSGPKRWD*EGTLVA
Trigger: GGCCACAAGTGTCCCCTCTCAGTCCCACCTTTTCGG...GCCGGAACCGAGCCCATGGTGTTGGCTCTCAACGTGACCCGCAGTCTGATCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp CCCGAATGCCTGCTGAAGGTGGCGCACACGTGTGCCTGGGATGTCCGGCTCTTCCCATGGTGCTGGTGCTaGCACTACAGGACCACCACC +
Preference number: 4 (lower is better)
Translates to: PECLLKVAHTCAWDVRLFPWCWC*HYRTTT
Trigger: GGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATGG...GAAGAGCCGGACATCCCAGGCACACGTGTGCGCCACCTTCAGCAGGCATTCGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp CCCATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGCCATGGTGCTGGTGCTaGCACTACAGGACCACCACC +
Preference number: 4 (lower is better)
Translates to: PMVLVLTLQDHHPPRGRQPWCWC*HYRTTT
Trigger: GGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATGG...CTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR GCA 90 bp GCGCACACGTGTGCCTGGGATGTCCGGCTCTTCACAGGGGATCAGACTGCGGGTGCAGGCCACCAGTCCTaGCGCCAGAAGTACCACCAA +
Preference number: 4 (lower is better)
Translates to: AHTCAWDVRLFTGDQTAGAGHQS*RQKYHQ
Trigger: TTGGTGGTACTTCTGGCGGCAGGACTGGTGGCCTGC...ACCCGCAGTCTGATCCCCTGTGAAGAGCCGGACATCCCAGGCACACGTGTGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp CTAGGGCTCCCACTGTTGGACTCAGGGGACGGAGGCAGGCTAGCTGAAGGGGCATGGGCGGTGACCACCTaGAGGGTGTCCTGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: LGLPLLDSGDGGRLAEGAWAVTT*RVSWKL
Trigger: CAACTTCCAGGACACCCTGCAGGTGGTCACCGCCCA...TGCCCCTTCAGCTAGCCTGCCTCCGTCCCCTGAGTCCAACAGTGGGAGCCCTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp ATCCCAAGGTGGCAGGGGTGTCCCTGTGCCGTCTGCTTCCTCTCGGGCAGGAGGAAGTCCAAGATCTGCTaGATCTGGGGCCGGATGGCC +
Preference number: 4 (lower is better)
Translates to: IPRWQGCPCAVCFLSGRRKSKIC*IWGRMA
Trigger: GGCCATCCGGCCCCAGATGCAGCAGATCTTGGACTT...CCTCCTGCCCGAGAGGAAGCAGACGGCACAGGGACACCCCTGCCACCTTGGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp GGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGTCGGGGGTCCTCGGCGAAGGTTaGTTTGACAAACATGGGGCC +
Preference number: 4 (lower is better)
Translates to: GADTTGPPPSTRKAGGSGVLGEG*FDKHGA
Trigger: GGCCCCATGTTTGTCAAAGCAACCTTCGCCGAGGAC...CCCCGACCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR GCA 90 bp GGGGTGTCCCTGTGCCGTCTGCTTCCTCTCGGGCAGGAGGATTCCAGCTTCCCGCGGTGGCTATGCTCTTaGTGTCCTCGGCGAAGGTTG +
Preference number: 4 (lower is better)
Translates to: GVSLCRLLPLGQEDSSFPRWLCS*CPRRRL
Trigger: CAACCTTCGCCGAGGACAGCAAGAGCATAGCCACCG...CGGGAAGCTGGAATCCTCCTGCCCGAGAGGAAGCAGACGGCACAGGGACACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp CACGTGTGCCTGGGATGTCCGGCTCTTCACAGGGGATCAGACTGCGGGTCACGTGGGAGCTCTCAGGTGTaGGGACGGAGCACCAGACCT +
Preference number: 4 (lower is better)
Translates to: HVCLGCPALHRGSDCGSRGSSQV*GRSTRP
Trigger: AGGTCTGGTGCTCCGTCCGCACACCTGAGAGCTCCC...ACGTGACCCGCAGTCTGATCCCCTGTGAAGAGCCGGACATCCCAGGCACACGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp CGATACCCTGCACCAGCTTGGAGGCAGATCCCAAGGTGGCAGGGGTGTCCCTGTGGGAGCTCTCAGGTGTaGGGACGGAGCACCAGACCT +
Preference number: 4 (lower is better)
Translates to: RYPAPAWRQIPRWQGCPCGSSQV*GRSTRP
Trigger: AGGTCTGGTGCTCCGTCCGCACACCTGAGAGCTCCC...ACAGGGACACCCCTGCCACCTTGGGATCTGCCTCCAAGCTGGTGCAGGGTATCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp GTCTCCTCTGCAGAGCTACCAGGACTGCTGCGTGCTGGGACCAGGACCTCCATCGGTGGCGCACACGTGTaGCTGGGATGTCCGGCTCTT +
Preference number: 4 (lower is better)
Translates to: VSSAELPGLLRAGTRTSIGGAHV*LGCPAL
Trigger: AAGAGCCGGACATCCCAGGCACACGTGTGCGCCACC...GATGGAGGTCCTGGTCCCAGCACGCAGCAGTCCTGGTAGCTCTGCAGAGGAGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp CATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAACCCCGCAGGGCTCCTaGAGTCTCGATTCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: HGAGADTTGPPPSTRKAGTPQGS*SLDSGC
Trigger: GCACCCTGAATCGAGACTGCAGGAGCCCTGCGGGGT...TCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp GGGGTGTCCCTGTGCCGTCTGCTTCCTCTCGGGCAGGAGGATTCCAGCTTCCCGTGGGGCTATGGCCTGTaGTTCAGTCAGGACACCTGG +
Preference number: 4 (lower is better)
Translates to: GVSLCRLLPLGQEDSSFPWGYGL*FSQDTW
Trigger: CCAGGTGTCCTGACTGAAGCACAGGCCATAGCCCCA...CGGGAAGCTGGAATCCTCCTGCCCGAGAGGAAGCAGACGGCACAGGGACACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp GGGGATCAGACTGCGGGTCACGTTGAGAGCCAACACCATGGGCTCGGTTCCGGCACCAGGACTGCTGCGTaGTGGGACCAGGACCTCCAT +
Preference number: 4 (lower is better)
Translates to: GDQTAGHVESQHHGLGSGTRTAA*WDQDLH
Trigger: ATGGAGGTCCTGGTCCCAGCACGCAGCAGTCCTGGT...GCCGGAACCGAGCCCATGGTGTTGGCTCTCAACGTGACCCGCAGTCTGATCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp GGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGTCGGGGGGTTCCTGTCTCCTCTaGAGAGCTACCAGGACTGCT +
Preference number: 4 (lower is better)
Translates to: GADTTGPPPSTRKAGGSGGSCLL*RATRTA
Trigger: AGCAGTCCTGGTAGCTCTGCAGAGGAGACAGGAACC...CCCCGACCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR GCA 90 bp GGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGATGTGGCAAGGGGACTaGGGCTGGCTTCTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: GAGADTTGPPPSTRKAGGMWQGD*GWLLLQ
Trigger: CTGAAGCAGAAGCCAGCCGCAGTCCCCTTGCCACAT...CCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CCA 90 bp CAAGCCCATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGCCTCCTCGTCCAGCGTaGCCCGCTTGTACGTCGACA +
Preference number: 4 (lower is better)
Translates to: QAHGAGADTTGPPPSTRKPPRPA*PACTST
Trigger: TGTCGACGTACAAGCGGGCCACGCTGGACGAGGAGG...CTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATGGGCTTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CCA 90 bp CCTGCACCAGCTTGGAGGCAGATCCCAAGGTGGCAGGGGTGTCCCTGTGCCGTCCCACTGTGGGGTCCATaGAGCTCAAGATGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: PAPAWRQIPRWQGCPCAVPLWGP*SSRWSW
Trigger: CCAGCTCCATCTTGAGCTCCATGGACCCCACAGTGG...GACGGCACAGGGACACCCCTGCCACCTTGGGATCTGCCTCCAAGCTGGTGCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp AGGCAGATCCCAAGGTGGCAGGGGTGTCCCTGTGCCGTCTGCTTCCTCTCGGGCACCTGCAGGGTGTCCTaGAAGTTGTCCTTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: RQIPRWQGCPCAVCFLSGTCRVS*KLSLAQ
Trigger: CTGGGCCAAGGACAACTTCCAGGACACCCTGCAGGT...GCCCGAGAGGAAGCAGACGGCACAGGGACACCCCTGCCACCTTGGGATCTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp GGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGACCTGCAGGGTGTCCTaGAAGTTGTCCTTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: GAGADTTGPPPSTRKAGGTCRVS*KLSLAQ
Trigger: CTGGGCCAAGGACAACTTCCAGGACACCCTGCAGGT...CCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CCA 90 bp GGGGATCAGACTGCGGGTCACGTTGAGAGCCAACACCATGGGCTCGGTTCCGGCAAGATCTGCTGCATCTaGGGCCGGATGGCCTCCTCG +
Preference number: 4 (lower is better)
Translates to: GDQTAGHVESQHHGLGSGKICCI*GRMASS
Trigger: CGAGGAGGCCATCCGGCCCCAGATGCAGCAGATCTT...GCCGGAACCGAGCCCATGGTGTTGGCTCTCAACGTGACCCGCAGTCTGATCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp CCGGCAGACCTGAGCCATGAGTGTGGTCTCCATTCCCTCGGGCTGCACCCCCAGACGGCGCTTCTCCTGTaGGATGGTGATGTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: PADLSHECGLHSLGLHPQTALLL*DGDVGQ
Trigger: CTGGCCAACATCACCATCCCACAGGAGAAGCGCCGT...CTGGGGGTGCAGCCCGAGGGAATGGAGACCACACTCATGGCTCAGGTCTGCCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CCA 90 bp CTAGGGCTCCCACTGTTGGACTCAGGGGACGGAGGCAGGCTAGCTGAAGGGGCAGTGATGAGGCCTTCGTaGGAGCTCTCAGGTGTGCGG +
Preference number: 4 (lower is better)
Translates to: LGLPLLDSGDGGRLAEGAVMRPS*ELSGVR
Trigger: CCGCACACCTGAGAGCTCCCACGAAGGCCTCATCAC...TGCCCCTTCAGCTAGCCTGCCTCCGTCCCCTGAGTCCAACAGTGGGAGCCCTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp CCCATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGTGATGAGGCCTTCGTaGGAGCTCTCAGGTGTGCGG +
Preference number: 4 (lower is better)
Translates to: PMVLVLTLQDHHPPRGRQVMRPS*ELSGVR
Trigger: CCGCACACCTGAGAGCTCCCACGAAGGCCTCATCAC...CTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CCA 90 bp CACGTGTGCCTGGGATGTCCGGCTCTTCACAGGGGATCAGACTGCGGGTCACGTTGTGAGGCGGGTTCATaGGTGAGCCAGGTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: HVCLGCPALHRGSDCGSRCEAGS*VSQVGS
Trigger: GCTGCCCACCTGGCTCACCCATGAACCCGCCTCACA...ACGTGACCCGCAGTCTGATCCCCTGTGAAGAGCCGGACATCCCAGGCACACGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp GGGGATCAGACTGCGGGTCACGTTGAGAGCCAACACCATGGGCTCGGTTCCGGCTCCCCTCCTCCGTCTTaGCTCTCTCCGCTTCGTCCT +
Preference number: 4 (lower is better)
Translates to: GDQTAGHVESQHHGLGSGSPPPS*LSPLRP
Trigger: AGGACGAAGCGGAGAGAGCCAAGACGGAGGAGGGGA...GCCGGAACCGAGCCCATGGTGTTGGCTCTCAACGTGACCCGCAGTCTGATCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp CCCGAATGCCTGCTGAAGGTGGCGCACACGTGTGCCTGGGATGTCCGGCTCTTCTCCCCTCCTCCGTCTTaGCTCTCTCCGCTTCGTCCT +
Preference number: 4 (lower is better)
Translates to: PECLLKVAHTCAWDVRLFSPPPS*LSPLRP
Trigger: AGGACGAAGCGGAGAGAGCCAAGACGGAGGAGGGGA...GAAGAGCCGGACATCCCAGGCACACGTGTGCGCCACCTTCAGCAGGCATTCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp GTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGTCAATGCCCTGGAGGCTaGATGGGGGTCTCGTCCTCA +
Preference number: 4 (lower is better)
Translates to: VLVLTLQDHHPPRGRQEGQCPGG*MGVSSS
Trigger: TGAGGACGAGACCCCCATCCAGCCTCCAGGGCATTG...ACCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp GGGGTGTCCCTGTGCCGTCTGCTTCCTCTCGGGCAGGAGGATTCCAGCTTCCCGCCTCCACACCTCTACTaGTCTCCACGCCCTTGCATG +
Preference number: 4 (lower is better)
Translates to: GVSLCRLLPLGQEDSSFPPPHLY*SPRPCM
Trigger: CATGCAAGGGCGTGGAGACCAGTAGAGGTGTGGAGG...CGGGAAGCTGGAATCCTCCTGCCCGAGAGGAAGCAGACGGCACAGGGACACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp GGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGCCTCCACACCTCTACTaGTCTCCACGCCCTTGCATG +
Preference number: 4 (lower is better)
Translates to: GAGADTTGPPPSTRKAGGPPHLY*SPRPCM
Trigger: CATGCAAGGGCGTGGAGACCAGTAGAGGTGTGGAGG...CCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp GGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGTCGGGGAGCCTCCCGAGTAACTaGGATTACAGGTGCCCACCA +
Preference number: 4 (lower is better)
Translates to: GADTTGPPPSTRKAGGSGSLPSN*DYRCPP
Trigger: TGGTGGGCACCTGTAATCCCAGTTACTCGGGAGGCT...CCCCGACCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp CCCATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGGCCCAGCCATGTGGTaGATGACGGTGCTCAGAGAG +
Preference number: 4 (lower is better)
Translates to: PMVLVLTLQDHHPPRGRQGPAMW*MTVLRE
Trigger: CTCTCTGAGCACCGTCATCCACCACATGGCTGGGCC...CTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp CCCGAATGCCTGCTGAAGGTGGCGCACACGTGTGCCTGGGATGTCCGGCTCTTCCCAGGCCCAGCCATGTaGTGGATGACGGTGCTCAGA +
Preference number: 4 (lower is better)
Translates to: PECLLKVAHTCAWDVRLFPGPAM*WMTVLR
Trigger: TCTGAGCACCGTCATCCACCACATGGCTGGGCCTGG...GAAGAGCCGGACATCCCAGGCACACGTGTGCGCCACCTTCAGCAGGCATTCGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp CTAGGGCTCCCACTGTTGGACTCAGGGGACGGAGGCAGGCTAGCTGAAGGGGCAACTAGAGGACTGGACTaGTCCTGGGAGCCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: LGLPLLDSGDGGRLAEGATRGLD*SWEPGP
Trigger: TGGGCCTGGCTCCCAGGACCAGTCCAGTCCTCTAGT...TGCCCCTTCAGCTAGCCTGCCTCCGTCCCCTGAGTCCAACAGTGGGAGCCCTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp CCCATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGCCTTGGGGTGGAGACTaGCGGCTGCAGCCTCAGATA +
Preference number: 4 (lower is better)
Translates to: PMVLVLTLQDHHPPRGRQPWGGD*RLQPQI
Trigger: TATCTGAGGCTGCAGCCGCCAGTCTCCACCCCAAGG...CTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp GCCAGCAGTGTATCTCTGACACAGTCTCACCCCGCAGGGCTCCTGCAGTCTCGACGATGCCCTGTGCCATaGACCTGCCGGCCAGAGCTC +
Preference number: 4 (lower is better)
Translates to: ASSVSLTQSHPAGLLQSRRCPVP*TCRPEL
Trigger: GAGCTCTGGCCGGCAGGTCCATGGCACAGGGCATCG...TCGAGACTGCAGGAGCCCTGCGGGGTGAGACTGTGTCAGAGATACACTGCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp CATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAAGGCAGATCCCAAGGTaGCAGGGGTGTCCCTGTGCC +
Preference number: 4 (lower is better)
Translates to: HGAGADTTGPPPSTRKAGRQIPR*QGCPCA
Trigger: GGCACAGGGACACCCCTGCCACCTTGGGATCTGCCT...TCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CCA 90 bp GGGGATCAGACTGCGGGTCACGTTGAGAGCCAACACCATGGGCTCGGTTCCGGCAGGGGACACCATGGCTaGGAGAAGCCCGCCTCTATG +
Preference number: 4 (lower is better)
Translates to: GDQTAGHVESQHHGLGSGRGHHG*EKPASM
Trigger: CATAGAGGCGGGCTTCTCCCAGCCATGGTGTCCCCT...GCCGGAACCGAGCCCATGGTGTTGGCTCTCAACGTGACCCGCAGTCTGATCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp GCCAGCAGTGTATCTCTGACACAGTCTCACCCCGCAGGGCTCCTGCAGTCTCGAGCAGAGGGGACACCATaGCTGGGAGAAGCCCGCCTC +
Preference number: 4 (lower is better)
Translates to: ASSVSLTQSHPAGLLQSRAEGTP*LGEARL
Trigger: GAGGCGGGCTTCTCCCAGCCATGGTGTCCCCTCTGC...TCGAGACTGCAGGAGCCCTGCGGGGTGAGACTGTGTCAGAGATACACTGCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp CATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGTTCCCAGAGGTTGCTaGAGGTCCCCCAGCGTGAGT +
Preference number: 4 (lower is better)
Translates to: HGAGADTTGPPPSTRKAGVPRGC*RSPSVS
Trigger: ACTCACGCTGGGGGACCTTCAGCAACCTCTGGGAAC...TCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR TCA 90 bp CCCGAATGCCTGCTGAAGGTGGCGCACACGTGTGCCTGGGATGTCCGGCTCTTCTCTCCTGTGGGATGGTaGTGTTGGCCAGTGCCGTCT +
Preference number: 4 (lower is better)
Translates to: PECLLKVAHTCAWDVRLFSPVGW*CWPVPS
Trigger: AGACGGCACTGGCCAACATCACCATCCCACAGGAGA...GAAGAGCCGGACATCCCAGGCACACGTGTGCGCCACCTTCAGCAGGCATTCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp GCGCACACGTGTGCCTGGGATGTCCGGCTCTTCACAGGGGATCAGACTGCGGGTTCTCCTGTGGGATGGTaGTGTTGGCCAGTGCCGTCT +
Preference number: 4 (lower is better)
Translates to: AHTCAWDVRLFTGDQTAGSPVGW*CWPVPS
Trigger: AGACGGCACTGGCCAACATCACCATCCCACAGGAGA...ACCCGCAGTCTGATCCCCTGTGAAGAGCCGGACATCCCAGGCACACGTGTGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp GCTCCTGGGCTCCCGTGGAGGTTAGCCCTGCAGGCACCGGGGAAATGGGGCTATGAAAAGGCAACCAGTTaGTGGCGGGTGCCAAGGTCT +
Preference number: 4 (lower is better)
Translates to: APGLPWRLALQAPGKWGYEKATS*WRVPRS
Trigger: AGACCTTGGCACCCGCCATCAACTGGTTGCCTTTTC...ATAGCCCCATTTCCCCGGTGCCTGCAGGGCTAACCTCCACGGGAGCCCAGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp ATCCCAAGGTGGCAGGGGTGTCCCTGTGCCGTCTGCTTCCTCTCGGGCAGGAGGGAAAAGGCAACCAGTTaGTGGCGGGTGCCAAGGTCT +
Preference number: 4 (lower is better)
Translates to: IPRWQGCPCAVCFLSGRREKATS*WRVPRS
Trigger: AGACCTTGGCACCCGCCATCAACTGGTTGCCTTTTC...CCTCCTGCCCGAGAGGAAGCAGACGGCACAGGGACACCCCTGCCACCTTGGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp CCGGCAGACCTGAGCCATGAGTGTGGTCTCCATTCCCTCGGGCTGCACCCCCAGGAAAAGGCAACCAGTTaGTGGCGGGTGCCAAGGTCT +
Preference number: 4 (lower is better)
Translates to: PADLSHECGLHSLGLHPQEKATS*WRVPRS
Trigger: AGACCTTGGCACCCGCCATCAACTGGTTGCCTTTTC...CTGGGGGTGCAGCCCGAGGGAATGGAGACCACACTCATGGCTCAGGTCTGCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR TCA 90 bp GTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGTCGGCGAAGGTTGCTTTaGCAAACATGGGGCCCAACG +
Preference number: 4 (lower is better)
Translates to: VLVLTLQDHHPPRGRQEGRRRLL*QTWGPT
Trigger: CGTTGGGCCCCATGTTTGTCAAAGCAACCTTCGCCG...ACCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR TCA 90 bp CTAGGGCTCCCACTGTTGGACTCAGGGGACGGAGGCAGGCTAGCTGAAGGGGCAGGGGTCATGCTCCACTaGTCTCTGTTGGGGGCTTTC +
Preference number: 4 (lower is better)
Translates to: LGLPLLDSGDGGRLAEGAGVMLH*SLLGAF
Trigger: GAAAGCCCCCAACAGAGATCAGTGGAGCATGACCCC...TGCCCCTTCAGCTAGCCTGCCTCCGTCCCCTGAGTCCAACAGTGGGAGCCCTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp GTCTCCTCTGCAGAGCTACCAGGACTGCTGCGTGCTGGGACCAGGACCTCCATCGAAGGCCTCCACGGATaGGTTCTTCCACCATGGCCG +
Preference number: 4 (lower is better)
Translates to: VSSAELPGLLRAGTRTSIEGLHG*VLPPWP
Trigger: CGGCCATGGTGGAAGAACTCATCCGTGGAGGCCTTC...GATGGAGGTCCTGGTCCCAGCACGCAGCAGTCCTGGTAGCTCTGCAGAGGAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp GCGCACACGTGTGCCTGGGATGTCCGGCTCTTCACAGGGGATCAGACTGCGGGTACTCGGTCTGACGCTTaGAGGCCTCCACGGATGAGT +
Preference number: 4 (lower is better)
Translates to: AHTCAWDVRLFTGDQTAGTRSDA*RPPRMS
Trigger: ACTCATCCGTGGAGGCCTTCAAGCGTCAGACCGAGT...ACCCGCAGTCTGATCCCCTGTGAAGAGCCGGACATCCCAGGCACACGTGTGCGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp CCCATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGACACATCCCAGGGGCTaGGGCAGCTGTCTGATTTGG +
Preference number: 4 (lower is better)
Translates to: PMVLVLTLQDHHPPRGRQTHPRG*GSCLIW
Trigger: CCAAATCAGACAGCTGCCTCAGCCCCTGGGATGTGT...CTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp CATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGAGGTAACGGGCCCCTaGGATAGACATGGGACAGCC +
Preference number: 4 (lower is better)
Translates to: HGAGADTTGPPPSTRKAGEVTGP*DRHGTA
Trigger: GGCTGTCCCATGTCTATCTCAGGGGCCCGTTACCTC...TCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp CATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAACTCCTGACCTCAGGTaGTCCGCCCACCTCAACCTC +
Preference number: 4 (lower is better)
Translates to: HGAGADTTGPPPSTRKAGTPDLR*SAHLNL
Trigger: GAGGTTGAGGTGGGCGGATCACCTGAGGTCAGGAGT...TCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp GCTCCTGGGCTCCCGTGGAGGTTAGCCCTGCAGGCACCGGGGAAATGGGGCTATGGGTCCTGCGGGAGGTaGCAGCTGTTTCTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: APGLPWRLALQAPGKWGYGSCGR*QLFLFS
Trigger: AGAAAAGAGAAACAGCTGTCACCTCCCGCAGGACCC...ATAGCCCCATTTCCCCGGTGCCTGCAGGGCTAACCTCCACGGGAGCCCAGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp CCCGAATGCCTGCTGAAGGTGGCGCACACGTGTGCCTGGGATGTCCGGCTCTTCCAGCCATGTGGTGGATaGCGGTGCTCAGAGAGAGGA +
Preference number: 4 (lower is better)
Translates to: PECLLKVAHTCAWDVRLFQPCGG*RCSERG
Trigger: TCCTCTCTCTGAGCACCGTCATCCACCACATGGCTG...GAAGAGCCGGACATCCCAGGCACACGTGTGCGCCACCTTCAGCAGGCATTCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp GGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGTCGGGGCTGCAAGTACTATCTTaGTTCAACCCAGGGGCCGAC +
Preference number: 4 (lower is better)
Translates to: GADTTGPPPSTRKAGGSGLQVLS*FNPGAD
Trigger: GTCGGCCCCTGGGTTGAATCAAGATAGTACTTGCAG...CCCCGACCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp GCCAGCAGTGTATCTCTGACACAGTCTCACCCCGCAGGGCTCCTGCAGTCTCGATTCCAGCTTCCCGGGTaGGGGGAGAGCACTGTCCAG +
Preference number: 4 (lower is better)
Translates to: ASSVSLTQSHPAGLLQSRFQLPG*GESTVQ
Trigger: CTGGACAGTGCTCTCCCCTCACCCGGGAAGCTGGAA...TCGAGACTGCAGGAGCCCTGCGGGGTGAGACTGTGTCAGAGATACACTGCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp CCCGAATGCCTGCTGAAGGTGGCGCACACGTGTGCCTGGGATGTCCGGCTCTTCGGCAGACCTGAGCCATaGGTGTGGTCTCCATTCCCT +
Preference number: 4 (lower is better)
Translates to: PECLLKVAHTCAWDVRLFGRPEP*VWSPFP
Trigger: AGGGAATGGAGACCACACTCATGGCTCAGGTCTGCC...GAAGAGCCGGACATCCCAGGCACACGTGTGCGCCACCTTCAGCAGGCATTCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp CTGCACCAGCTTGGAGGCAGATCCCAAGGTGGCAGGGGTGTCCCTGTGCCGTCTGGCAGACCTGAGCCATaGGTGTGGTCTCCATTCCCT +
Preference number: 4 (lower is better)
Translates to: LHQLGGRSQGGRGVPVPSGRPEP*VWSPFP
Trigger: AGGGAATGGAGACCACACTCATGGCTCAGGTCTGCC...AGACGGCACAGGGACACCCCTGCCACCTTGGGATCTGCCTCCAAGCTGGTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp CCCATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGGCAGACCTGAGCCATaGGTGTGGTCTCCATTCCCT +
Preference number: 4 (lower is better)
Translates to: PMVLVLTLQDHHPPRGRQGRPEP*VWSPFP
Trigger: AGGGAATGGAGACCACACTCATGGCTCAGGTCTGCC...CTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR GCA 90 bp CAAGCCCATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGCCACCAGTCCTaGCGCCAGAAGTACCACCAA +
Preference number: 4 (lower is better)
Translates to: QAHGAGADTTGPPPSTRKAGHQS*RQKYHQ
Trigger: TTGGTGGTACTTCTGGCGGCAGGACTGGTGGCCTGC...CTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATGGGCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR GCA 90 bp CTGGCCTCCACACCTCTACTGGTCTCCACGCCCTTGCATGAGGTGACAGGAGCTCTGGATGCCCAGTGCTaGCAAGCAGGCCACCAGTCC +
Preference number: 4 (lower is better)
Translates to: LASTPLLVSTPLHEVTGALDAQC*QAGHQS
Trigger: GGACTGGTGGCCTGCTTGGCAGCACTGGGCATCCAG...AGCTCCTGTCACCTCATGCAAGGGCGTGGAGACCAGTAGAGGTGTGGAGGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp CCTGCACCAGCTTGGAGGCAGATCCCAAGGTGGCAGGGGTGTCCCTGTGCCGTCTTGTCTGGTACTGGATaGCCAGTGCTGCCAAGCAGG +
Preference number: 4 (lower is better)
Translates to: PAPAWRQIPRWQGCPCAVLSGTG*PVLPSR
Trigger: CCTGCTTGGCAGCACTGGGCATCCAGTACCAGACAA...GACGGCACAGGGACACCCCTGCCACCTTGGGATCTGCCTCCAAGCTGGTGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp ATCCCAAGGTGGCAGGGGTGTCCCTGTGCCGTCTGCTTCCTCTCGGGCAGGAGGGGTCTGCAGCTCGGCTaGCGTCACTTTGTGGTAGAT +
Preference number: 4 (lower is better)
Translates to: IPRWQGCPCAVCFLSGRRGLQLG*RHFVVD
Trigger: ATCTACCACAAAGTGACGGCAGCCGAGCTGCAGACC...CCTCCTGCCCGAGAGGAAGCAGACGGCACAGGGACACCCCTGCCACCTTGGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp CCGGCAGACCTGAGCCATGAGTGTGGTCTCCATTCCCTCGGGCTGCACCCCCAGGGTCTGCAGCTCGGCTaGCGTCACTTTGTGGTAGAT +
Preference number: 4 (lower is better)
Translates to: PADLSHECGLHSLGLHPQGLQLG*RHFVVD
Trigger: ATCTACCACAAAGTGACGGCAGCCGAGCTGCAGACC...CTGGGGGTGCAGCCCGAGGGAATGGAGACCACACTCATGGCTCAGGTCTGCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR GCA 90 bp CTAGGGCTCCCACTGTTGGACTCAGGGGACGGAGGCAGGCTAGCTGAAGGGGCACGGTGGCTATGCTCTTaGTGTCCTCGGCGAAGGTTG +
Preference number: 4 (lower is better)
Translates to: LGLPLLDSGDGGRLAEGARWLCS*CPRRRL
Trigger: CAACCTTCGCCGAGGACAGCAAGAGCATAGCCACCG...TGCCCCTTCAGCTAGCCTGCCTCCGTCCCCTGAGTCCAACAGTGGGAGCCCTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp TGGATGACGGTGCTCAGAGAGAGGATTTGGGTCCTGCGGGAGGTGACAGCTGTTTTCTCCCCCAGGGTGTaGCGCCCGTTCACCGGCTCC +
Preference number: 4 (lower is better)
Translates to: WMTVLRERIWVLREVTAVFSPRV*RPFTGS
Trigger: GGAGCCGGTGAACGGGCGGCACACCCTGGGGGAGAA...AACAGCTGTCACCTCCCGCAGGACCCAAATCCTCTCTCTGAGCACCGTCATCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp CATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAAGGGTGGGGAGCGAGTaGTCAGCCCCGTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: HGAGADTTGPPPSTRKAGRVGSE*SAPFFF
Trigger: GAAGAAGAACGGGGCTGAGCACTCGCTCCCCACCCT...TCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR GCA 90 bp CTGGCCTCCACACCTCTACTGGTCTCCACGCCCTTGCATGAGGTGACAGGAGCTGCTGGGATGGGGGACTaGTGCAGAGAGGTAACGGGC +
Preference number: 4 (lower is better)
Translates to: LASTPLLVSTPLHEVTGAAGMGD*CREVTG
Trigger: GCCCGTTACCTCTCTGCAGCAGTCCCCCATCCCAGC...AGCTCCTGTCACCTCATGCAAGGGCGTGGAGACCAGTAGAGGTGTGGAGGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp CCCGAATGCCTGCTGAAGGTGGCGCACACGTGTGCCTGGGATGTCCGGCTCTTCAACTGGGATTACAGGTaGCCACCACCACTCCCGGCT +
Preference number: 4 (lower is better)
Translates to: PECLLKVAHTCAWDVRLFNWDYR*PPPLPA
Trigger: AGCCGGGAGTGGTGGTGGGCACCTGTAATCCCAGTT...GAAGAGCCGGACATCCCAGGCACACGTGTGCGCCACCTTCAGCAGGCATTCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp CCCATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGTGGGGCTATGGCCTGTaGTTCAGTCAGGACACCTGG +
Preference number: 4 (lower is better)
Translates to: PMVLVLTLQDHHPPRGRQWGYGL*FSQDTW
Trigger: CCAGGTGTCCTGACTGAAGCACAGGCCATAGCCCCA...CTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp CAAGCCCATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGACCAGGACTGCTGCGTaGTGGGACCAGGACCTCCAT +
Preference number: 4 (lower is better)
Translates to: QAHGAGADTTGPPPSTRKTRTAA*WDQDLH
Trigger: ATGGAGGTCCTGGTCCCAGCACGCAGCAGTCCTGGT...CTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATGGGCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR GCA 90 bp CAAGCCCATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGCAGAGCTACCAGGACTaGTGCGTGCTGGGACCAGGA +
Preference number: 4 (lower is better)
Translates to: QAHGAGADTTGPPPSTRKQSYQD*CVLGPG
Trigger: TCCTGGTCCCAGCACGCAGCAGTCCTGGTAGCTCTG...CTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATGGGCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR GCA 90 bp ATCCCAAGGTGGCAGGGGTGTCCCTGTGCCGTCTGCTTCCTCTCGGGCAGGAGGACTGCGGCTGGCTTCTaGTTCAGCTACTTCTCGGGT +
Preference number: 4 (lower is better)
Translates to: IPRWQGCPCAVCFLSGRRTAAGF*FSYFSG
Trigger: ACCCGAGAAGTAGCTGAAGCAGAAGCCAGCCGCAGT...CCTCCTGCCCGAGAGGAAGCAGACGGCACAGGGACACCCCTGCCACCTTGGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp CCGGCAGACCTGAGCCATGAGTGTGGTCTCCATTCCCTCGGGCTGCACCCCCAGACTGCGGCTGGCTTCTaGTTCAGCTACTTCTCGGGT +
Preference number: 4 (lower is better)
Translates to: PADLSHECGLHSLGLHPQTAAGF*FSYFSG
Trigger: ACCCGAGAAGTAGCTGAAGCAGAAGCCAGCCGCAGT...CTGGGGGTGCAGCCCGAGGGAATGGAGACCACACTCATGGCTCAGGTCTGCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CCA 90 bp GTCTCCTCTGCAGAGCTACCAGGACTGCTGCGTGCTGGGACCAGGACCTCCATCGTGGCCATCAGGGACTaGGTTGGCCTTGATCCAGCC +
Preference number: 4 (lower is better)
Translates to: VSSAELPGLLRAGTRTSIVAIRD*VGLDPA
Trigger: GGCTGGATCAAGGCCAACCCAGTCCCTGATGGCCAC...GATGGAGGTCCTGGTCCCAGCACGCAGCAGTCCTGGTAGCTCTGCAGAGGAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp CGATACCCTGCACCAGCTTGGAGGCAGATCCCAAGGTGGCAGGGGTGTCCCTGTCGCTCACGCTGGCCGTaGAGTTTTCGAGGAGGTGCT +
Preference number: 4 (lower is better)
Translates to: RYPAPAWRQIPRWQGCPCRSRWP*SFRGGA
Trigger: AGCACCTCCTCGAAAACTCCACGGCCAGCGTGAGCG...ACAGGGACACCCCTGCCACCTTGGGATCTGCCTCCAAGCTGGTGCAGGGTATCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp CATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGACGCTCACGCTGGCCGTaGAGTTTTCGAGGAGGTGCT +
Preference number: 4 (lower is better)
Translates to: HGAGADTTGPPPSTRKAGRSRWP*SFRGGA
Trigger: AGCACCTCCTCGAAAACTCCACGGCCAGCGTGAGCG...TCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CCA 90 bp CAAGCCCATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGCTGCCTCGCTCACGCTaGCCGTGGAGTTTTCGAGGA +
Preference number: 4 (lower is better)
Translates to: QAHGAGADTTGPPPSTRKLPRSR*PWSFRG
Trigger: TCCTCGAAAACTCCACGGCCAGCGTGAGCGAGGCAG...CTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATGGGCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CCA 90 bp CAGCTAGGGCTCCCACTGTTGGACTCAGGGGACGGAGGCAGGCTAGCTGAAGGGAAGCCCAGGCCAGACTaGTCCACCTGGATCACGTTG +
Preference number: 4 (lower is better)
Translates to: QLGLPLLDSGDGGRLAEGKPRPD*STWITL
Trigger: CAACGTGATCCAGGTGGACCAGTCTGGCCTGGGCTT...CCCTTCAGCTAGCCTGCCTCCGTCCCCTGAGTCCAACAGTGGGAGCCCTAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp CTGCACCAGCTTGGAGGCAGATCCCAAGGTGGCAGGGGTGTCCCTGTGCCGTCTAAGCCCAGGCCAGACTaGTCCACCTGGATCACGTTG +
Preference number: 4 (lower is better)
Translates to: LHQLGGRSQGGRGVPVPSKPRPD*STWITL
Trigger: CAACGTGATCCAGGTGGACCAGTCTGGCCTGGGCTT...AGACGGCACAGGGACACCCCTGCCACCTTGGGATCTGCCTCCAAGCTGGTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp CCCATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGAAGCCCAGGCCAGACTaGTCCACCTGGATCACGTTG +
Preference number: 4 (lower is better)
Translates to: PMVLVLTLQDHHPPRGRQKPRPD*STWITL
Trigger: CAACGTGATCCAGGTGGACCAGTCTGGCCTGGGCTT...CTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CCA 90 bp CATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAAAGCGAGAGGGGCTGTaGGGATCGGTGATGAGGCCT +
Preference number: 4 (lower is better)
Translates to: HGAGADTTGPPPSTRKAGKREGL*GSVMRP
Trigger: AGGCCTCATCACCGATCCCCACAGCCCCTCTCGCTT...TCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CCA 90 bp TTGAGGGTCCTGACCCGACCTCATTCTGCTATAGCCATCAGTCCCCTGCTGTGGGGGCCCCGCTTCCCTTaGAGGAAGGGGTTCCGCTGC +
Preference number: 4 (lower is better)
Translates to: LRVLTRPHSAIAISPLLWGPRFP*RKGFRC
Trigger: GCAGCGGAACCCCTTCCTCCAAGGGAAGCGGGGCCC...CCACAGCAGGGGACTGATGGCTATAGCAGAATGAGGTCGGGTCAGGACCCTCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000357071.8
CDS-3UTR CCA 90 bp GTATTTGTGGCGTATCTGGCGCTTGTCAGTGTGGGGCCCAGGCCTGATGAGCCAAAGCAGGGCCCCGGGTaGCCAAGCGGGCTGAGCAAT +
Preference number: 4 (lower is better)
Translates to: VFVAYLALVSVGPRPDEPKQGPG*PSGLSN
Trigger: ATTGCTCAGCCCGCTTGGCCACCCGGGGCCCTGCTT...TGGCTCATCAGGCCTGGGCCCCACACTGACAAGCGCCAGATACGCCACAAATAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp CTGGCCTCCACACCTCTACTGGTCTCCACGCCCTTGCATGAGGTGACAGGAGCTTGGCGCTTGTCAGTGTaGGGCCCAGGCCTGATGAGC +
Preference number: 4 (lower is better)
Translates to: LASTPLLVSTPLHEVTGAWRLSV*GPGLMS
Trigger: GCTCATCAGGCCTGGGCCCCACACTGACAAGCGCCA...AGCTCCTGTCACCTCATGCAAGGGCGTGGAGACCAGTAGAGGTGTGGAGGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp CATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGATGGAGACTTGCTCTGTaGCCCAGGGATCCGTGCCTC +
Preference number: 4 (lower is better)
Translates to: HGAGADTTGPPPSTRKAGWRLAL*PRDPCL
Trigger: GAGGCACGGATCCCTGGGCCACAGAGCAAGTCTCCA...TCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp GGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGGGCAGCTGTCTGATTTaGAGACTTGCTCTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: GAGADTTGPPPSTRKAGGGSCLI*RLALWP
Trigger: GGGCCACAGAGCAAGTCTCCAAATCAGACAGCTGCC...CCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp CCCGAATGCCTGCTGAAGGTGGCGCACACGTGTGCCTGGGATGTCCGGCTCTTCCCCCTGCTGTGGCTTTaGGGATCAGAACTTCCCAGC +
Preference number: 4 (lower is better)
Translates to: PECLLKVAHTCAWDVRLFPLLWL*GSELPS
Trigger: GCTGGGAAGTTCTGATCCCCAAAGCCACAGCAGGGG...GAAGAGCCGGACATCCCAGGCACACGTGTGCGCCACCTTCAGCAGGCATTCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp CAAGCCCATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGCCAGGCCCAGCCATGTaGTGGATGACGGTGCTCAGA +
Preference number: 4 (lower is better)
Translates to: QAHGAGADTTGPPPSTRKPGPAM*WMTVLR
Trigger: TCTGAGCACCGTCATCCACCACATGGCTGGGCCTGG...CTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATGGGCTTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp GCTCCTGGGCTCCCGTGGAGGTTAGCCCTGCAGGCACCGGGGAAATGGGGCTATGGGGAAATGGGGCTATaGCCTGTGCTTCAGTCAGGA +
Preference number: 4 (lower is better)
Translates to: APGLPWRLALQAPGKWGYGEMGL*PVLQSG
Trigger: TCCTGACTGAAGCACAGGCCATAGCCCCATTTCCCC...ATAGCCCCATTTCCCCGGTGCCTGCAGGGCTAACCTCCACGGGAGCCCAGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp CAGCCCGAAAAGGTGGGACTGAGAGGGGACACTTGTGGCCAGCAGTGTATCTCTGGAAAGCGGTGGCTGTaGAGGGCACGTGCTGCCCCC +
Preference number: 4 (lower is better)
Translates to: QPEKVGLRGDTCGQQCISGKRWL*RARAAP
Trigger: GGGGGCAGCACGTGCCCTCCACAGCCACCGCTTTCC...AGAGATACACTGCTGGCCACAAGTGTCCCCTCTCAGTCCCACCTTTTCGGGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp CATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAAGGACTGCTGCGTGCTaGGACCAGGACCTCCATCTG +
Preference number: 4 (lower is better)
Translates to: HGAGADTTGPPPSTRKAGRTAAC*DQDLHL
Trigger: CAGATGGAGGTCCTGGTCCCAGCACGCAGCAGTCCT...TCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CCA 90 bp GGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGCAAGGGGACTGCGGCTaGCTTCTGCTTCAGCTACTT +
Preference number: 4 (lower is better)
Translates to: GAGADTTGPPPSTRKAGGQGDCG*LLLQLL
Trigger: AAGTAGCTGAAGCAGAAGCCAGCCGCAGTCCCCTTG...CCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR TCA 90 bp CTAGGGCTCCCACTGTTGGACTCAGGGGACGGAGGCAGGCTAGCTGAAGGGGCAGATGGAGCTGGTCACTaGGACACAAGCTTCGCTCAG +
Preference number: 4 (lower is better)
Translates to: LGLPLLDSGDGGRLAEGADGAGH*DTSFAQ
Trigger: CTGAGCGAAGCTTGTGTCTCAGTGACCAGCTCCATC...TGCCCCTTCAGCTAGCCTGCCTCCGTCCCCTGAGTCCAACAGTGGGAGCCCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp GCCAGCAGTGTATCTCTGACACAGTCTCACCCCGCAGGGCTCCTGCAGTCTCGAGTTCCCAGAGGTTGCTaGAGGTCCCCCAGCGTGAGT +
Preference number: 4 (lower is better)
Translates to: ASSVSLTQSHPAGLLQSRVPRGC*RSPSVS
Trigger: ACTCACGCTGGGGGACCTTCAGCAACCTCTGGGAAC...TCGAGACTGCAGGAGCCCTGCGGGGTGAGACTGTGTCAGAGATACACTGCTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp GGGGATCAGACTGCGGGTCACGTTGAGAGCCAACACCATGGGCTCGGTTCCGGCTTCTCATCGGCGTCCTaGAAGCGCTGGTCAAGGAAG +
Preference number: 4 (lower is better)
Translates to: GDQTAGHVESQHHGLGSGFSSAS*KRWSRK
Trigger: CTTCCTTGACCAGCGCTTTCAGGACGCCGATGAGAA...GCCGGAACCGAGCCCATGGTGTTGGCTCTCAACGTGACCCGCAGTCTGATCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp GTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGTTTCTCATCGGCGTCCTaGAAGCGCTGGTCAAGGAAG +
Preference number: 4 (lower is better)
Translates to: VLVLTLQDHHPPRGRQEGFSSAS*KRWSRK
Trigger: CTTCCTTGACCAGCGCTTTCAGGACGCCGATGAGAA...ACCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR TCA 90 bp CACGTGTGCCTGGGATGTCCGGCTCTTCACAGGGGATCAGACTGCGGGTCACGTGGGGTCATGCTCCACTaGTCTCTGTTGGGGGCTTTC +
Preference number: 4 (lower is better)
Translates to: HVCLGCPALHRGSDCGSRGVMLH*SLLGAF
Trigger: GAAAGCCCCCAACAGAGATCAGTGGAGCATGACCCC...ACGTGACCCGCAGTCTGATCCCCTGTGAAGAGCCGGACATCCCAGGCACACGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp CAAGCCCATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGGGGTCATGCTCCACTaGTCTCTGTTGGGGGCTTTC +
Preference number: 4 (lower is better)
Translates to: QAHGAGADTTGPPPSTRKGVMLH*SLLGAF
Trigger: GAAAGCCCCCAACAGAGATCAGTGGAGCATGACCCC...CTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATGGGCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR TCA 90 bp CATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGACAGACTTCGCACTTGTaGGGCGGGTTCATGGGTGAG +
Preference number: 4 (lower is better)
Translates to: HGAGADTTGPPPSTRKAGQTSHL*GGFMGE
Trigger: CTCACCCATGAACCCGCCTCACAAGTGCGAAGTCTG...TCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR TCA 90 bp GTATTTGTGGCGTATCTGGCGCTTGTCAGTGTGGGGCCCAGGCCTGATGAGCCACACCCGAATGCCTGCTaGAGGTGGCGCACACGTGTG +
Preference number: 4 (lower is better)
Translates to: VFVAYLALVSVGPRPDEPHPNAC*RWRTRV
Trigger: CACACGTGTGCGCCACCTTCAGCAGGCATTCGGGTG...TGGCTCATCAGGCCTGGGCCCCACACTGACAAGCGCCAGATACGCCACAAATAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp CTGCACCAGCTTGGAGGCAGATCCCAAGGTGGCAGGGGTGTCCCTGTGCCGTCTCGCCCTTGCATGAGGTaGCAGGAGCTGAAATCACAC +
Preference number: 4 (lower is better)
Translates to: LHQLGGRSQGGRGVPVPSRPCMR*QELKSH
Trigger: GTGTGATTTCAGCTCCTGTCACCTCATGCAAGGGCG...AGACGGCACAGGGACACCCCTGCCACCTTGGGATCTGCCTCCAAGCTGGTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp CACGTGTGCCTGGGATGTCCGGCTCTTCACAGGGGATCAGACTGCGGGTCACGTCCAGCAGTGTATCTCTaGCACAGTCTCACCCCGCAG +
Preference number: 4 (lower is better)
Translates to: HVCLGCPALHRGSDCGSRPAVYL*HSLTPQ
Trigger: CTGCGGGGTGAGACTGTGTCAGAGATACACTGCTGG...ACGTGACCCGCAGTCTGATCCCCTGTGAAGAGCCGGACATCCCAGGCACACGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp CATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGACCAGCAGTGTATCTCTaGCACAGTCTCACCCCGCAG +
Preference number: 4 (lower is better)
Translates to: HGAGADTTGPPPSTRKAGPAVYL*HSLTPQ
Trigger: CTGCGGGGTGAGACTGTGTCAGAGATACACTGCTGG...TCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp CGATACCCTGCACCAGCTTGGAGGCAGATCCCAAGGTGGCAGGGGTGTCCCTGTCCAGCAGTGTATCTCTaGCACAGTCTCACCCCGCAG +
Preference number: 4 (lower is better)
Translates to: RYPAPAWRQIPRWQGCPCPAVYL*HSLTPQ
Trigger: CTGCGGGGTGAGACTGTGTCAGAGATACACTGCTGG...ACAGGGACACCCCTGCCACCTTGGGATCTGCCTCCAAGCTGGTGCAGGGTATCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp CAAGCCCATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGCTGTGGAAGTTCACCTaGAGGCCGTTGGGGTATGCG +
Preference number: 4 (lower is better)
Translates to: QAHGAGADTTGPPPSTRKLWKFT*RPLGYA
Trigger: CGCATACCCCAACGGCCTGCAGGTGAACTTCCACAG...CTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATGGGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR GCA 90 bp CTAGGGCTCCCACTGTTGGACTCAGGGGACGGAGGCAGGCTAGCTGAAGGGGCATTGTCTGGTACTGGATaGCCAGTGCTGCCAAGCAGG +
Preference number: 4 (lower is better)
Translates to: LGLPLLDSGDGGRLAEGALSGTG*PVLPSR
Trigger: CCTGCTTGGCAGCACTGGGCATCCAGTACCAGACAA...TGCCCCTTCAGCTAGCCTGCCTCCGTCCCCTGAGTCCAACAGTGGGAGCCCTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp CATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAAAGTCCAAGATCTGCTaGATCTGGGGCCGGATGGCC +
Preference number: 4 (lower is better)
Translates to: HGAGADTTGPPPSTRKAGKSKIC*IWGRMA
Trigger: GGCCATCCGGCCCCAGATGCAGCAGATCTTGGACTT...TCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR GCA 90 bp ATCCCAAGGTGGCAGGGGTGTCCCTGTGCCGTCTGCTTCCTCTCGGGCAGGAGGTCAAAGTCCAAGATCTaGTGCATCTGGGGCCGGATG +
Preference number: 4 (lower is better)
Translates to: IPRWQGCPCAVCFLSGRRSKSKI*CIWGRM
Trigger: CATCCGGCCCCAGATGCAGCAGATCTTGGACTTTGA...CCTCCTGCCCGAGAGGAAGCAGACGGCACAGGGACACCCCTGCCACCTTGGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp CCCGAATGCCTGCTGAAGGTGGCGCACACGTGTGCCTGGGATGTCCGGCTCTTCGTCCTCGGCGAAGGTTaGTTTGACAAACATGGGGCC +
Preference number: 4 (lower is better)
Translates to: PECLLKVAHTCAWDVRLFVLGEG*FDKHGA
Trigger: GGCCCCATGTTTGTCAAAGCAACCTTCGCCGAGGAC...GAAGAGCCGGACATCCCAGGCACACGTGTGCGCCACCTTCAGCAGGCATTCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp GCCAGCAGTGTATCTCTGACACAGTCTCACCCCGCAGGGCTCCTGCAGTCTCGAAGGGTGGGGAGCGAGTaGTCAGCCCCGTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: ASSVSLTQSHPAGLLQSRRVGSE*SAPFFF
Trigger: GAAGAAGAACGGGGCTGAGCACTCGCTCCCCACCCT...TCGAGACTGCAGGAGCCCTGCGGGGTGAGACTGTGTCAGAGATACACTGCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp GCTCCTGGGCTCCCGTGGAGGTTAGCCCTGCAGGCACCGGGGAAATGGGGCTATTCTGATTTGGAGACTTaGTCTGTGGCCCAGGGATCC +
Preference number: 4 (lower is better)
Translates to: APGLPWRLALQAPGKWGYSDLET*SVAQGS
Trigger: GGATCCCTGGGCCACAGAGCAAGTCTCCAAATCAGA...ATAGCCCCATTTCCCCGGTGCCTGCAGGGCTAACCTCCACGGGAGCCCAGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp GTCTCCTCTGCAGAGCTACCAGGACTGCTGCGTGCTGGGACCAGGACCTCCATCAACTGGGATTACAGGTaGCCACCACCACTCCCGGCT +
Preference number: 4 (lower is better)
Translates to: VSSAELPGLLRAGTRTSINWDYR*PPPLPA
Trigger: AGCCGGGAGTGGTGGTGGGCACCTGTAATCCCAGTT...GATGGAGGTCCTGGTCCCAGCACGCAGCAGTCCTGGTAGCTCTGCAGAGGAGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp CAGTCTCGATTCAGGGTGCTTGGTGTTCCCAGATGGTGTTTGAGGGTCCTGACCCCTGTGCCATGGACCTaGCGGCCAGAGCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: QSRFRVLGVPRWCLRVLTPVPWT*RPELLG
Trigger: GCCCAGGAGCTCTGGCCGGCAGGTCCATGGCACAGG...GGTCAGGACCCTCAAACACCATCTGGGAACACCAAGCACCCTGAATCGAGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp GGGGATCAGACTGCGGGTCACGTTGAGAGCCAACACCATGGGCTCGGTTCCGGCCCACTCTCGATACCCTaGACCAGCTTGGAGGCAGAT +
Preference number: 4 (lower is better)
Translates to: GDQTAGHVESQHHGLGSGPLSIP*TSLEAD
Trigger: ATCTGCCTCCAAGCTGGTGCAGGGTATCGAGAGTGG...GCCGGAACCGAGCCCATGGTGTTGGCTCTCAACGTGACCCGCAGTCTGATCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp GTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGTCCACTCTCGATACCCTaGACCAGCTTGGAGGCAGAT +
Preference number: 4 (lower is better)
Translates to: VLVLTLQDHHPPRGRQEGPLSIP*TSLEAD
Trigger: ATCTGCCTCCAAGCTGGTGCAGGGTATCGAGAGTGG...ACCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR GCA 90 bp CAAGCCCATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGATGTGGCAAGGGGACTaGGGCTGGCTTCTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: QAHGAGADTTGPPPSTRKMWQGD*GWLLLQ
Trigger: CTGAAGCAGAAGCCAGCCGCAGTCCCCTTGCCACAT...CTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATGGGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR GCA 90 bp CGATACCCTGCACCAGCTTGGAGGCAGATCCCAAGGTGGCAGGGGTGTCCCTGTATGTGGCAAGGGGACTaGGGCTGGCTTCTGCTTCAG +
Preference number: 4 (lower is better)
Translates to: RYPAPAWRQIPRWQGCPCMWQGD*GWLLLQ
Trigger: CTGAAGCAGAAGCCAGCCGCAGTCCCCTTGCCACAT...ACAGGGACACCCCTGCCACCTTGGGATCTGCCTCCAAGCTGGTGCAGGGTATCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp TGGATGACGGTGCTCAGAGAGAGGATTTGGGTCCTGCGGGAGGTGACAGCTGTTTCACCTGCAGGCCGTTaGGGTATGCGTCGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: WMTVLRERIWVLREVTAVSPAGR*GMRRPR
Trigger: CCGAGGGCGACGCATACCCCAACGGCCTGCAGGTGA...AACAGCTGTCACCTCCCGCAGGACCCAAATCCTCTCTCTGAGCACCGTCATCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp GTTCCCAGATGGTGTTTGAGGGTCCTGACCCGACCTCATTCTGCTATAGCCATCGCAGCCCAGCACCTCTaGCCACTCCGGGGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: VPRWCLRVLTRPHSAIAIAAQHL*PLRGLW
Trigger: CCACAGCCCCCGGAGTGGCCAGAGGTGCTGGGCTGC...GATGGCTATAGCAGAATGAGGTCGGGTCAGGACCCTCAAACACCATCTGGGAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp CCCATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGGGATCTTGTCTaGTACTGGATGCCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: PMVLVLTLQDHHPPRGRQEGDLV*YWMPSA
Trigger: AGCACTGGGCATCCAGTACCAGACAAGATCCCCCTC...CTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CCA 90 bp GGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGCCATGGAGCTCAAGATaGAGCTGGTCACTGAGACAC +
Preference number: 4 (lower is better)
Translates to: GAGADTTGPPPSTRKAGGPWSSR*SWSLRH
Trigger: GTGTCTCAGTGACCAGCTCCATCTTGAGCTCCATGG...CCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CCA 90 bp CATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGACCACTGTGGGGTCCATaGAGCTCAAGATGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: HGAGADTTGPPPSTRKAGPLWGP*SSRWSW
Trigger: CCAGCTCCATCTTGAGCTCCATGGACCCCACAGTGG...TCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CCA 90 bp CAAGCCCATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGCCACTGTGGGGTCCATaGAGCTCAAGATGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: QAHGAGADTTGPPPSTRKPLWGP*SSRWSW
Trigger: CCAGCTCCATCTTGAGCTCCATGGACCCCACAGTGG...CTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATGGGCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CCA 90 bp CTGGCCTCCACACCTCTACTGGTCTCCACGCCCTTGCATGAGGTGACAGGAGCTGTGGCCATCAGGGACTaGGTTGGCCTTGATCCAGCC +
Preference number: 4 (lower is better)
Translates to: LASTPLLVSTPLHEVTGAVAIRD*VGLDPA
Trigger: GGCTGGATCAAGGCCAACCCAGTCCCTGATGGCCAC...AGCTCCTGTCACCTCATGCAAGGGCGTGGAGACCAGTAGAGGTGTGGAGGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp GCCAGCAGTGTATCTCTGACACAGTCTCACCCCGCAGGGCTCCTGCAGTCTCGACGCTCACGCTGGCCGTaGAGTTTTCGAGGAGGTGCT +
Preference number: 4 (lower is better)
Translates to: ASSVSLTQSHPAGLLQSRRSRWP*SFRGGA
Trigger: AGCACCTCCTCGAAAACTCCACGGCCAGCGTGAGCG...TCGAGACTGCAGGAGCCCTGCGGGGTGAGACTGTGTCAGAGATACACTGCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp CATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAACCTGCAGGGTGTCCTaGAAGTTGTCCTTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: HGAGADTTGPPPSTRKAGTCRVS*KLSLAQ
Trigger: CTGGGCCAAGGACAACTTCCAGGACACCCTGCAGGT...TCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CCA 90 bp GGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGTCGGGGGGATCACGTTGCTGTTaGAGTTCTTGGAATCGGCAC +
Preference number: 4 (lower is better)
Translates to: GADTTGPPPSTRKAGGSGGSRCC*SSWNRH
Trigger: GTGCCGATTCCAAGAACTCCAACAGCAACGTGATCC...CCCCGACCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CCA 90 bp GGGGATCAGACTGCGGGTCACGTTGAGAGCCAACACCATGGGCTCGGTTCCGGCCCAGACTGGTCCACCTaGATCACGTTGCTGTTGGAG +
Preference number: 4 (lower is better)
Translates to: GDQTAGHVESQHHGLGSGPDWST*ITLLLE
Trigger: CTCCAACAGCAACGTGATCCAGGTGGACCAGTCTGG...GCCGGAACCGAGCCCATGGTGTTGGCTCTCAACGTGACCCGCAGTCTGATCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp GTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGTCCAGACTGGTCCACCTaGATCACGTTGCTGTTGGAG +
Preference number: 4 (lower is better)
Translates to: VLVLTLQDHHPPRGRQEGPDWST*ITLLLE
Trigger: CTCCAACAGCAACGTGATCCAGGTGGACCAGTCTGG...ACCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CCA 90 bp CGATACCCTGCACCAGCTTGGAGGCAGATCCCAAGGTGGCAGGGGTGTCCCTGTACGGCGCTTCTCCTGTaGGATGGTGATGTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: RYPAPAWRQIPRWQGCPCTALLL*DGDVGQ
Trigger: CTGGCCAACATCACCATCCCACAGGAGAAGCGCCGT...ACAGGGACACCCCTGCCACCTTGGGATCTGCCTCCAAGCTGGTGCAGGGTATCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp GGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGTCGGGGGTTCTGAGAACTCCTTaGAATTGGAGAGGGAGCCGA +
Preference number: 4 (lower is better)
Translates to: GADTTGPPPSTRKAGGSGVLRTP*NWRGSR
Trigger: TCGGCTCCCTCTCCAATTCCAAGGAGTTCTCAGAAC...CCCCGACCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CCA 90 bp GCCAGCAGTGTATCTCTGACACAGTCTCACCCCGCAGGGCTCCTGCAGTCTCGAGCGCACACGTGTGCCTaGGATGTCCGGCTCTTCACA +
Preference number: 4 (lower is better)
Translates to: ASSVSLTQSHPAGLLQSRAHTCA*DVRLFT
Trigger: TGTGAAGAGCCGGACATCCCAGGCACACGTGTGCGC...TCGAGACTGCAGGAGCCCTGCGGGGTGAGACTGTGTCAGAGATACACTGCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp GCCAGCAGTGTATCTCTGACACAGTCTCACCCCGCAGGGCTCCTGCAGTCTCGAGCTCCTCTCTCTGCCTaGCCTCCACACCTCTACTGG +
Preference number: 4 (lower is better)
Translates to: ASSVSLTQSHPAGLLQSRAPLSA*PPHLYW
Trigger: CCAGTAGAGGTGTGGAGGCCAGGCAGAGAGAGGAGC...TCGAGACTGCAGGAGCCCTGCGGGGTGAGACTGTGTCAGAGATACACTGCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp GTATTTGTGGCGTATCTGGCGCTTGTCAGTGTGGGGCCCAGGCCTGATGAGCCACCTGGGGAAGAGGGTTaGCCGGACAGACCCTGGTGT +
Preference number: 4 (lower is better)
Translates to: VFVAYLALVSVGPRPDEPPGEEG*PDRPWC
Trigger: ACACCAGGGTCTGTCCGGCCAACCCTCTTCCCCAGG...TGGCTCATCAGGCCTGGGCCCCACACTGACAAGCGCCAGATACGCCACAAATAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp GTATTTGTGGCGTATCTGGCGCTTGTCAGTGTGGGGCCCAGGCCTGATGAGCCACCCAGGGGCCGACAATaGACTGCAGCCCAGGGTAAG +
Preference number: 4 (lower is better)
Translates to: VFVAYLALVSVGPRPDEPPRGRQ*TAAQGK
Trigger: CTTACCCTGGGCTGCAGTCCATTGTCGGCCCCTGGG...TGGCTCATCAGGCCTGGGCCCCACACTGACAAGCGCCAGATACGCCACAAATAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp CCCGAATGCCTGCTGAAGGTGGCGCACACGTGTGCCTGGGATGTCCGGCTCTTCACAGGCCAGACTGGGTaGAGGAATCTTCCCCTCACA +
Preference number: 4 (lower is better)
Translates to: PECLLKVAHTCAWDVRLFTGQTG*RNLPLT
Trigger: TGTGAGGGGAAGATTCCTCCACCCAGTCTGGCCTGT...GAAGAGCCGGACATCCCAGGCACACGTGTGCGCCACCTTCAGCAGGCATTCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp TTGAGGGTCCTGACCCGACCTCATTCTGCTATAGCCATCAGTCCCCTGCTGTGGGCCTGGCTTCCCCACTaGATGGCAGAGGCCGCTCCA +
Preference number: 4 (lower is better)
Translates to: LRVLTRPHSAIAISPLLWAWLPH*MAEAAP
Trigger: TGGAGCGGCCTCTGCCATCCAGTGGGGAAGCCAGGC...CCACAGCAGGGGACTGATGGCTATAGCAGAATGAGGTCGGGTCAGGACCCTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp GGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGACCAGGACCTCCATCTaGAATCCACTCTCGATACCC +
Preference number: 4 (lower is better)
Translates to: GAGADTTGPPPSTRKAGGTRTSI*NPLSIP
Trigger: GGGTATCGAGAGTGGATTCCAGATGGAGGTCCTGGT...CCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CCA 90 bp GCTGGCTTCTGCTTCAGCTACTTCTCGGGTTCCTGTCTCCTCTGCAGAGCTACCGCAGAGGGGACACCATaGCTGGGAGAAGCCCGCCTC +
Preference number: 4 (lower is better)
Translates to: AGFCFSYFSGSCLLCRATAEGTP*LGEARL
Trigger: GAGGCGGGCTTCTCCCAGCCATGGTGTCCCCTCTGC...GGTAGCTCTGCAGAGGAGACAGGAACCCGAGAAGTAGCTGAAGCAGAAGCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR CAA 72 bp TCCGGCTCTTCACAGGGGATCAGACTGCGGGTCACGTaGAGAGCCAACACCATGGGCTCGGTTCCGGCTGAA +
Preference number: 4 (lower is better)
Translates to: SGSSQGIRLRVT*RANTMGSVPAE
Trigger: TTCAGCCGGAACCGAGCCCATGGTGTTGGCTCTCAACGTGACCCGCAGTCTGATCCCCTGTGAAGAGCCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp CATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGATGGAGCTGGTCACTaGGACACAAGCTTCGCTCAG +
Preference number: 4 (lower is better)
Translates to: HGAGADTTGPPPSTRKAGDGAGH*DTSFAQ
Trigger: CTGAGCGAAGCTTGTGTCTCAGTGACCAGCTCCATC...TCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR TCA 90 bp CGATACCCTGCACCAGCTTGGAGGCAGATCCCAAGGTGGCAGGGGTGTCCCTGTTTAGAGGTTTGGCCCTaGGCTCCTCGATCCTGGTCT +
Preference number: 4 (lower is better)
Translates to: RYPAPAWRQIPRWQGCPCLEVWP*APRSWS
Trigger: AGACCAGGATCGAGGAGCTCAGGGCCAAACCTCTAA...ACAGGGACACCCCTGCCACCTTGGGATCTGCCTCCAAGCTGGTGCAGGGTATCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp CATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGATTAGAGGTTTGGCCCTaGGCTCCTCGATCCTGGTCT +
Preference number: 4 (lower is better)
Translates to: HGAGADTTGPPPSTRKAGLEVWP*APRSWS
Trigger: AGACCAGGATCGAGGAGCTCAGGGCCAAACCTCTAA...TCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR TCA 90 bp GCCAGAGCTCCTGGGCTCCCGTGGAGGTTAGCCCTGCAGGCACCGGGGAAATGGTCTTGGAATCGGCACTaGCATAGACAGAGAAGAAGG +
Preference number: 4 (lower is better)
Translates to: ARAPGLPWRLALQAPGKWSWNRH*HRQRRR
Trigger: CCTTCTTCTCTGTCTATGTCAGTGCCGATTCCAAGA...CCATTTCCCCGGTGCCTGCAGGGCTAACCTCCACGGGAGCCCAGGAGCTCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp CCCGAATGCCTGCTGAAGGTGGCGCACACGTGTGCCTGGGATGTCCGGCTCTTCTCACTTTGTGGTAGATaGGCTCCTCATCACGGCGCT +
Preference number: 4 (lower is better)
Translates to: PECLLKVAHTCAWDVRLFSLCGR*APHHGA
Trigger: AGCGCCGTGATGAGGAGCTCATCTACCACAAAGTGA...GAAGAGCCGGACATCCCAGGCACACGTGTGCGCCACCTTCAGCAGGCATTCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp GTCTCCTCTGCAGAGCTACCAGGACTGCTGCGTGCTGGGACCAGGACCTCCATCTTCTCATCGGCGTCCTaGAAGCGCTGGTCAAGGAAG +
Preference number: 4 (lower is better)
Translates to: VSSAELPGLLRAGTRTSIFSSAS*KRWSRK
Trigger: CTTCCTTGACCAGCGCTTTCAGGACGCCGATGAGAA...GATGGAGGTCCTGGTCCCAGCACGCAGCAGTCCTGGTAGCTCTGCAGAGGAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp CCGGCAGACCTGAGCCATGAGTGTGGTCTCCATTCCCTCGGGCTGCACCCCCAGGGCCTTTTCCTTGGCTaGTTTTCGGGTTTCCTCATC +
Preference number: 4 (lower is better)
Translates to: PADLSHECGLHSLGLHPQGLFLG*FSGFLI
Trigger: GATGAGGAAACCCGAAAATCAGCCAAGGAAAAGGCC...CTGGGGGTGCAGCCCGAGGGAATGGAGACCACACTCATGGCTCAGGTCTGCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR TCA 90 bp GTATTTGTGGCGTATCTGGCGCTTGTCAGTGTGGGGCCCAGGCCTGATGAGCCAACCATGCACTCGGTCTaGCGCTTGAAGGCCTCCACG +
Preference number: 4 (lower is better)
Translates to: VFVAYLALVSVGPRPDEPTMHSV*RLKAST
Trigger: CGTGGAGGCCTTCAAGCGTCAGACCGAGTGCATGGT...TGGCTCATCAGGCCTGGGCCCCACACTGACAAGCGCCAGATACGCCACAAATAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp GTTCCCAGATGGTGTTTGAGGGTCCTGACCCGACCTCATTCTGCTATAGCCATCTGGAGAGGGAGCCGATaGCCCGGAAGCGAGAGGGGC +
Preference number: 4 (lower is better)
Translates to: VPRWCLRVLTRPHSAIAIWRGSR*PGSERG
Trigger: GCCCCTCTCGCTTCCGGGTCATCGGCTCCCTCTCCA...GATGGCTATAGCAGAATGAGGTCGGGTCAGGACCCTCAAACACCATCTGGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp CAGTCTCGATTCAGGGTGCTTGGTGTTCCCAGATGGTGTTTGAGGGTCCTGACCAGGCGGGTTCATGGGTaGGCCAGGTGGGCAGCGGAA +
Preference number: 4 (lower is better)
Translates to: QSRFRVLGVPRWCLRVLTRRVHG*ARWAAE
Trigger: TTCCGCTGCCCACCTGGCTCACCCATGAACCCGCCT...GGTCAGGACCCTCAAACACCATCTGGGAACACCAAGCACCCTGAATCGAGACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp GCTGGCTTCTGCTTCAGCTACTTCTCGGGTTCCTGTCTCCTCTGCAGAGCTACCCACCCGAATGCCTGCTaGAGGTGGCGCACACGTGTG +
Preference number: 4 (lower is better)
Translates to: AGFCFSYFSGSCLLCRATHPNAC*RWRTRV
Trigger: CACACGTGTGCGCCACCTTCAGCAGGCATTCGGGTG...GGTAGCTCTGCAGAGGAGACAGGAACCCGAGAAGTAGCTGAAGCAGAAGCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp CCCGAATGCCTGCTGAAGGTGGCGCACACGTGTGCCTGGGATGTCCGGCTCTTCGCTGAGGCAGCTGTCTaGTTTGGAGACTTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: PECLLKVAHTCAWDVRLFAEAAV*FGDLLC
Trigger: ACAGAGCAAGTCTCCAAATCAGACAGCTGCCTCAGC...GAAGAGCCGGACATCCCAGGCACACGTGTGCGCCACCTTCAGCAGGCATTCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp CAGTCTCGATTCAGGGTGCTTGGTGTTCCCAGATGGTGTTTGAGGGTCCTGACCCGGAGGCAGGCTAGCTaGAGGGGCAGTGCCCATGAG +
Preference number: 4 (lower is better)
Translates to: QSRFRVLGVPRWCLRVLTRRQAS*RGSAHE
Trigger: CTCATGGGCACTGCCCCTTCAGCTAGCCTGCCTCCG...GGTCAGGACCCTCAAACACCATCTGGGAACACCAAGCACCCTGAATCGAGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp GTATTTGTGGCGTATCTGGCGCTTGTCAGTGTGGGGCCCAGGCCTGATGAGCCAGAGGTAACGGGCCCCTaGGATAGACATGGGACAGCC +
Preference number: 4 (lower is better)
Translates to: VFVAYLALVSVGPRPDEPEVTGP*DRHGTA
Trigger: GGCTGTCCCATGTCTATCTCAGGGGCCCGTTACCTC...TGGCTCATCAGGCCTGGGCCCCACACTGACAAGCGCCAGATACGCCACAAATAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp CTGCACCAGCTTGGAGGCAGATCCCAAGGTGGCAGGGGTGTCCCTGTGCCGTCTCTGCAAGTACTATCTTaGTTCAACCCAGGGGCCGAC +
Preference number: 4 (lower is better)
Translates to: LHQLGGRSQGGRGVPVPSLQVLS*FNPGAD
Trigger: GTCGGCCCCTGGGTTGAATCAAGATAGTACTTGCAG...AGACGGCACAGGGACACCCCTGCCACCTTGGGATCTGCCTCCAAGCTGGTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp GCTGTGGCTTTGGGGATCAGAACTTCCCAGCTAGGGCTCCCACTGTTGGACTCACTGGATGCCCAGTGCTaGCAAGCAGGCCACCAGTCC +
Preference number: 4 (lower is better)
Translates to: AVALGIRTSQLGLPLLDSLDAQC*QAGHQS
Trigger: GGACTGGTGGCCTGCTTGGCAGCACTGGGCATCCAG...TGAGTCCAACAGTGGGAGCCCTAGCTGGGAAGTTCTGATCCCCAAAGCCACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp CAAGCCCATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGTTGTCTGGTACTGGATaGCCAGTGCTGCCAAGCAGG +
Preference number: 4 (lower is better)
Translates to: QAHGAGADTTGPPPSTRKLSGTG*PVLPSR
Trigger: CCTGCTTGGCAGCACTGGGCATCCAGTACCAGACAA...CTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATGGGCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR GCA 90 bp GGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGTCGGGGGAGGTGCTTGATGATTaGTTGGTTGTGTTCCCAGAG +
Preference number: 4 (lower is better)
Translates to: GADTTGPPPSTRKAGGSGEVLDD*LVVFPE
Trigger: CTCTGGGAACACAACCAAGCAATCATCAAGCACCTC...CCCCGACCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR GCA 90 bp GTATTTGTGGCGTATCTGGCGCTTGTCAGTGTGGGGCCCAGGCCTGATGAGCCATTGCGCCTTTCTCTCTaGCTCGCTCACGCTGGCCGT +
Preference number: 4 (lower is better)
Translates to: VFVAYLALVSVGPRPDEPLRLSL*LAHAGR
Trigger: ACGGCCAGCGTGAGCGAGGCAGAGAGAAAGGCGCAA...TGGCTCATCAGGCCTGGGCCCCACACTGACAAGCGCCAGATACGCCACAAATAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp GGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGTCGGGGCCACCTGGATCACGTTaGTGTTGGAGTTCTTGGAAT +
Preference number: 4 (lower is better)
Translates to: GADTTGPPPSTRKAGGSGPPGSR*CWSSWN
Trigger: ATTCCAAGAACTCCAACAGCAACGTGATCCAGGTGG...CCCCGACCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR GCA 90 bp CCCATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGTCAAAGTCCAAGATCTaGTGCATCTGGGGCCGGATG +
Preference number: 4 (lower is better)
Translates to: PMVLVLTLQDHHPPRGRQSKSKI*CIWGRM
Trigger: CATCCGGCCCCAGATGCAGCAGATCTTGGACTTTGA...CTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR GCA 90 bp GGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGGGTGATGTTGGCCAGTaGCGTCTCAAAGTCCAAGAT +
Preference number: 4 (lower is better)
Translates to: GAGADTTGPPPSTRKAGGGDVGQ*RLKVQD
Trigger: ATCTTGGACTTTGAGACGGCACTGGCCAACATCACC...CCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR GCA 90 bp GCTGTGGCTTTGGGGATCAGAACTTCCCAGCTAGGGCTCCCACTGTTGGACTCACCAGTTGATGGCGGGTaGCAAGGTCTGCAGCTCGGC +
Preference number: 4 (lower is better)
Translates to: AVALGIRTSQLGLPLLDSPVDGG*QGLQLG
Trigger: GCCGAGCTGCAGACCTTGGCACCCGCCATCAACTGG...TGAGTCCAACAGTGGGAGCCCTAGCTGGGAAGTTCTGATCCCCAAAGCCACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp GCCAGCAGTGTATCTCTGACACAGTCTCACCCCGCAGGGCTCCTGCAGTCTCGACGGTGGCTATGCTCTTaGTGTCCTCGGCGAAGGTTG +
Preference number: 4 (lower is better)
Translates to: ASSVSLTQSHPAGLLQSRRWLCS*CPRRRL
Trigger: CAACCTTCGCCGAGGACAGCAAGAGCATAGCCACCG...TCGAGACTGCAGGAGCCCTGCGGGGTGAGACTGTGTCAGAGATACACTGCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp CTAGGGCTCCCACTGTTGGACTCAGGGGACGGAGGCAGGCTAGCTGAAGGGGCAGACCCGACCTCATTCTaGTATAGCCATCAGTCCCCT +
Preference number: 4 (lower is better)
Translates to: LGLPLLDSGDGGRLAEGADPTSF*YSHQSP
Trigger: AGGGGACTGATGGCTATAGCAGAATGAGGTCGGGTC...TGCCCCTTCAGCTAGCCTGCCTCCGTCCCCTGAGTCCAACAGTGGGAGCCCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp GCTCCTGGGCTCCCGTGGAGGTTAGCCCTGCAGGCACCGGGGAAATGGGGCTATAGTCTCGATTCAGGGTaGTTGGTGTTCCCAGATGGT +
Preference number: 4 (lower is better)
Translates to: APGLPWRLALQAPGKWGYSLDSG*LVFPDG
Trigger: ACCATCTGGGAACACCAAGCACCCTGAATCGAGACT...ATAGCCCCATTTCCCCGGTGCCTGCAGGGCTAACCTCCACGGGAGCCCAGGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp GTTCCCAGATGGTGTTTGAGGGTCCTGACCCGACCTCATTCTGCTATAGCCATCCCTGTGCCATGGACCTaGCGGCCAGAGCTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: VPRWCLRVLTRPHSAIAIPVPWT*RPELLG
Trigger: GCCCAGGAGCTCTGGCCGGCAGGTCCATGGCACAGG...GATGGCTATAGCAGAATGAGGTCGGGTCAGGACCCTCAAACACCATCTGGGAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp CAAGCCCATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGCCACTCTCGATACCCTaGACCAGCTTGGAGGCAGAT +
Preference number: 4 (lower is better)
Translates to: QAHGAGADTTGPPPSTRKPLSIP*TSLEAD
Trigger: ATCTGCCTCCAAGCTGGTGCAGGGTATCGAGAGTGG...CTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATGGGCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR GCA 90 bp CATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGTTCCTGTCTCCTCTaGAGAGCTACCAGGACTGCT +
Preference number: 4 (lower is better)
Translates to: HGAGADTTGPPPSTRKAGGSCLL*RATRTA
Trigger: AGCAGTCCTGGTAGCTCTGCAGAGGAGACAGGAACC...TCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR GCA 90 bp TTGAGGGTCCTGACCCGACCTCATTCTGCTATAGCCATCAGTCCCCTGCTGTGGTCCATTCCCTCGGGCTaGACCCCCAGCCCTAGGACA +
Preference number: 4 (lower is better)
Translates to: LRVLTRPHSAIAISPLLWSIPSG*TPSPRT
Trigger: TGTCCTAGGGCTGGGGGTGCAGCCCGAGGGAATGGA...CCACAGCAGGGGACTGATGGCTATAGCAGAATGAGGTCGGGTCAGGACCCTCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp CCCGAATGCCTGCTGAAGGTGGCGCACACGTGTGCCTGGGATGTCCGGCTCTTCCCATGGAGCTCAAGATaGAGCTGGTCACTGAGACAC +
Preference number: 4 (lower is better)
Translates to: PECLLKVAHTCAWDVRLFPWSSR*SWSLRH
Trigger: GTGTCTCAGTGACCAGCTCCATCTTGAGCTCCATGG...GAAGAGCCGGACATCCCAGGCACACGTGTGCGCCACCTTCAGCAGGCATTCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp CAGCTAGGGCTCCCACTGTTGGACTCAGGGGACGGAGGCAGGCTAGCTGAAGGGCCATGGAGCTCAAGATaGAGCTGGTCACTGAGACAC +
Preference number: 4 (lower is better)
Translates to: QLGLPLLDSGDGGRLAEGPWSSR*SWSLRH
Trigger: GTGTCTCAGTGACCAGCTCCATCTTGAGCTCCATGG...CCCTTCAGCTAGCCTGCCTCCGTCCCCTGAGTCCAACAGTGGGAGCCCTAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp GCTGGCTTCTGCTTCAGCTACTTCTCGGGTTCCTGTCTCCTCTGCAGAGCTACCGTCCCCCAGCGTGAGTaGCCATCAGGGACTGGGTTG +
Preference number: 4 (lower is better)
Translates to: AGFCFSYFSGSCLLCRATVPQRE*PSGTGL
Trigger: CAACCCAGTCCCTGATGGCCACTCACGCTGGGGGAC...GGTAGCTCTGCAGAGGAGACAGGAACCCGAGAAGTAGCTGAAGCAGAAGCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp GCCAGCAGTGTATCTCTGACACAGTCTCACCCCGCAGGGCTCCTGCAGTCTCGAACGGCGCTTCTCCTGTaGGATGGTGATGTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: ASSVSLTQSHPAGLLQSRTALLL*DGDVGQ
Trigger: CTGGCCAACATCACCATCCCACAGGAGAAGCGCCGT...TCGAGACTGCAGGAGCCCTGCGGGGTGAGACTGTGTCAGAGATACACTGCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp CTGGCCTCCACACCTCTACTGGTCTCCACGCCCTTGCATGAGGTGACAGGAGCTACGGCGCTTCTCCTGTaGGATGGTGATGTTGGCCAG +
Preference number: 4 (lower is better)
Translates to: LASTPLLVSTPLHEVTGATALLL*DGDVGQ
Trigger: CTGGCCAACATCACCATCCCACAGGAGAAGCGCCGT...AGCTCCTGTCACCTCATGCAAGGGCGTGGAGACCAGTAGAGGTGTGGAGGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp GCCAGAGCTCCTGGGCTCCCGTGGAGGTTAGCCCTGCAGGCACCGGGGAAATGGCATCGGCCTTTTCCTTaGCTGATTTTCGGGTTTCCT +
Preference number: 4 (lower is better)
Translates to: ARAPGLPWRLALQAPGKWHRPFP*LIFGFP
Trigger: AGGAAACCCGAAAATCAGCCAAGGAAAAGGCCGATG...CCATTTCCCCGGTGCCTGCAGGGCTAACCTCCACGGGAGCCCAGGAGCTCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp GGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGTCGGGGCATCGGCCTTTTCCTTaGCTGATTTTCGGGTTTCCT +
Preference number: 4 (lower is better)
Translates to: GADTTGPPPSTRKAGGSGHRPFP*LIFGFP
Trigger: AGGAAACCCGAAAATCAGCCAAGGAAAAGGCCGATG...CCCCGACCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CCA 90 bp GGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGTCGGGGCAAAGTTTAAGGCCTTaGGTGAGGAGCGTGTGTAGA +
Preference number: 4 (lower is better)
Translates to: GADTTGPPPSTRKAGGSGQSLRP*VRSVCR
Trigger: TCTACACACGCTCCTCACCCAAGGCCTTAAACTTTG...CCCCGACCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CCA 90 bp GTATTTGTGGCGTATCTGGCGCTTGTCAGTGTGGGGCCCAGGCCTGATGAGCCACCACTCCGGGGGCTGTaGAAGTTCACCTGCAGGGAA +
Preference number: 4 (lower is better)
Translates to: VFVAYLALVSVGPRPDEPPLRGL*KFTCRE
Trigger: TTCCCTGCAGGTGAACTTCCACAGCCCCCGGAGTGG...TGGCTCATCAGGCCTGGGCCCCACACTGACAAGCGCCAGATACGCCACAAATAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357071.8
CDS-3UTR CCA 90 bp CAGCCCGAAAAGGTGGGACTGAGAGGGGACACTTGTGGCCAGCAGTGTATCTCTTGGCGCTTGTCAGTGTaGGGCCCAGGCCTGATGAGC +
Preference number: 4 (lower is better)
Translates to: QPEKVGLRGDTCGQQCISWRLSV*GPGLMS
Trigger: GCTCATCAGGCCTGGGCCCCACACTGACAAGCGCCA...AGAGATACACTGCTGGCCACAAGTGTCCCCTCTCAGTCCCACCTTTTCGGGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp CTGCACCAGCTTGGAGGCAGATCCCAAGGTGGCAGGGGTGTCCCTGTGCCGTCTGAGGGAGTAAATCAGTaGGGCTTCCCTTGTCCACAG +
Preference number: 4 (lower is better)
Translates to: LHQLGGRSQGGRGVPVPSEGVNQ*GFPCPQ
Trigger: CTGTGGACAAGGGAAGCCCCACTGATTTACTCCCTC...AGACGGCACAGGGACACCCCTGCCACCTTGGGATCTGCCTCCAAGCTGGTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp CAGCTAGGGCTCCCACTGTTGGACTCAGGGGACGGAGGCAGGCTAGCTGAAGGGGAGGGAGTAAATCAGTaGGGCTTCCCTTGTCCACAG +
Preference number: 4 (lower is better)
Translates to: QLGLPLLDSGDGGRLAEGEGVNQ*GFPCPQ
Trigger: CTGTGGACAAGGGAAGCCCCACTGATTTACTCCCTC...CCCTTCAGCTAGCCTGCCTCCGTCCCCTGAGTCCAACAGTGGGAGCCCTAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp CATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGCAGCTGTCTGATTTaGAGACTTGCTCTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: HGAGADTTGPPPSTRKAGGSCLI*RLALWP
Trigger: GGGCCACAGAGCAAGTCTCCAAATCAGACAGCTGCC...TCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp ATCCCAAGGTGGCAGGGGTGTCCCTGTGCCGTCTGCTTCCTCTCGGGCAGGAGGATCAGTCCCCTGCTGTaGCTTTGGGGATCAGAACTT +
Preference number: 4 (lower is better)
Translates to: IPRWQGCPCAVCFLSGRRISPLL*LWGSEL
Trigger: AAGTTCTGATCCCCAAAGCCACAGCAGGGGACTGAT...CCTCCTGCCCGAGAGGAAGCAGACGGCACAGGGACACCCCTGCCACCTTGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp GCGCACACGTGTGCCTGGGATGTCCGGCTCTTCACAGGGGATCAGACTGCGGGTCTTGGTGTTCCCAGATaGTGTTTGAGGGTCCTGACC +
Preference number: 4 (lower is better)
Translates to: AHTCAWDVRLFTGDQTAGLGVPR*CLRVLT
Trigger: GGTCAGGACCCTCAAACACCATCTGGGAACACCAAG...ACCCGCAGTCTGATCCCCTGTGAAGAGCCGGACATCCCAGGCACACGTGTGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp GTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGTCTTGGTGTTCCCAGATaGTGTTTGAGGGTCCTGACC +
Preference number: 4 (lower is better)
Translates to: VLVLTLQDHHPPRGRQEGLGVPR*CLRVLT
Trigger: GGTCAGGACCCTCAAACACCATCTGGGAACACCAAG...ACCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp CAGCCCGAAAAGGTGGGACTGAGAGGGGACACTTGTGGCCAGCAGTGTATCTCTAGACCCTGGTGTGGCTaGGATGGGGGACTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: QPEKVGLRGDTCGQQCISRPWCG*DGGLLQ
Trigger: CTGCAGCAGTCCCCCATCCCAGCCACACCAGGGTCT...AGAGATACACTGCTGGCCACAAGTGTCCCCTCTCAGTCCCACCTTTTCGGGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp GCTGTGGCTTTGGGGATCAGAACTTCCCAGCTAGGGCTCCCACTGTTGGACTCACCTGGGGAAGAGGGTTaGCCGGACAGACCCTGGTGT +
Preference number: 4 (lower is better)
Translates to: AVALGIRTSQLGLPLLDSPGEEG*PDRPWC
Trigger: ACACCAGGGTCTGTCCGGCCAACCCTCTTCCCCAGG...TGAGTCCAACAGTGGGAGCCCTAGCTGGGAAGTTCTGATCCCCAAAGCCACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp GCCAGCAGTGTATCTCTGACACAGTCTCACCCCGCAGGGCTCCTGCAGTCTCGAAAGGCACTAGAGGACTaGACTGGTCCTGGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: ASSVSLTQSHPAGLLQSRKALED*TGPGSQ
Trigger: CTGGCTCCCAGGACCAGTCCAGTCCTCTAGTGCCTT...TCGAGACTGCAGGAGCCCTGCGGGGTGAGACTGTGTCAGAGATACACTGCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp GCGCACACGTGTGCCTGGGATGTCCGGCTCTTCACAGGGGATCAGACTGCGGGTACCAGGACCTCCATCTaGAATCCACTCTCGATACCC +
Preference number: 4 (lower is better)
Translates to: AHTCAWDVRLFTGDQTAGTRTSI*NPLSIP
Trigger: GGGTATCGAGAGTGGATTCCAGATGGAGGTCCTGGT...ACCCGCAGTCTGATCCCCTGTGAAGAGCCGGACATCCCAGGCACACGTGTGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp CATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGACAAGGGGACTGCGGCTaGCTTCTGCTTCAGCTACTT +
Preference number: 4 (lower is better)
Translates to: HGAGADTTGPPPSTRKAGQGDCG*LLLQLL
Trigger: AAGTAGCTGAAGCAGAAGCCAGCCGCAGTCCCCTTG...TCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CCA 90 bp GCTGGCTTCTGCTTCAGCTACTTCTCGGGTTCCTGTCTCCTCTGCAGAGCTACCAAGCCCGCCTCTATGTaGCAAGGGGACTGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: AGFCFSYFSGSCLLCRATKPASM*QGDCGW
Trigger: CCAGCCGCAGTCCCCTTGCCACATAGAGGCGGGCTT...GGTAGCTCTGCAGAGGAGACAGGAACCCGAGAAGTAGCTGAAGCAGAAGCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp GTTCCCAGATGGTGTTTGAGGGTCCTGACCCGACCTCATTCTGCTATAGCCATCGGACTGGGTTGGCCTTaGTCCAGCCCCCACAGGCGT +
Preference number: 4 (lower is better)
Translates to: VPRWCLRVLTRPHSAIAIGLGWP*SSPHRR
Trigger: ACGCCTGTGGGGGCTGGATCAAGGCCAACCCAGTCC...GATGGCTATAGCAGAATGAGGTCGGGTCAGGACCCTCAAACACCATCTGGGAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp CAAGCCCATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGTCACTTTGTGGTAGATaGGCTCCTCATCACGGCGCT +
Preference number: 4 (lower is better)
Translates to: QAHGAGADTTGPPPSTRKSLCGR*APHHGA
Trigger: AGCGCCGTGATGAGGAGCTCATCTACCACAAAGTGA...CTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATGGGCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR TCA 90 bp GTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGTAGATCATGTAGTTGTTaGGCAGGCATCTGTCGGTGG +
Preference number: 4 (lower is better)
Translates to: VLVLTLQDHHPPRGRQEGRSCSC*AGICRW
Trigger: CCACCGACAGATGCCTGCTCAACAACTACATGATCT...ACCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR TCA 90 bp CTAGGGCTCCCACTGTTGGACTCAGGGGACGGAGGCAGGCTAGCTGAAGGGGCAGCAGCGGAAGTGTTCTaGGAACTCCTTGGAATTGGA +
Preference number: 4 (lower is better)
Translates to: LGLPLLDSGDGGRLAEGAAAEVF*ELLGIG
Trigger: TCCAATTCCAAGGAGTTCTCAGAACACTTCCGCTGC...TGCCCCTTCAGCTAGCCTGCCTCCGTCCCCTGAGTCCAACAGTGGGAGCCCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp CCCATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGCAGCGGAAGTGTTCTaGGAACTCCTTGGAATTGGA +
Preference number: 4 (lower is better)
Translates to: PMVLVLTLQDHHPPRGRQAAEVF*ELLGIG
Trigger: TCCAATTCCAAGGAGTTCTCAGAACACTTCCGCTGC...CTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR TCA 90 bp GTTCCCAGATGGTGTTTGAGGGTCCTGACCCGACCTCATTCTGCTATAGCCATCAGGCGGGTTCATGGGTaGGCCAGGTGGGCAGCGGAA +
Preference number: 4 (lower is better)
Translates to: VPRWCLRVLTRPHSAIAIRRVHG*ARWAAE
Trigger: TTCCGCTGCCCACCTGGCTCACCCATGAACCCGCCT...GATGGCTATAGCAGAATGAGGTCGGGTCAGGACCCTCAAACACCATCTGGGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp GTTCCCAGATGGTGTTTGAGGGTCCTGACCCGACCTCATTCTGCTATAGCCATCGAAAACCCGCCAGTGTaGGGAAGCAGGGCCCCGGGT +
Preference number: 4 (lower is better)
Translates to: VPRWCLRVLTRPHSAIAIENPPV*GSRAPG
Trigger: ACCCGGGGCCCTGCTTCCTCACACTGGCGGGTTTTC...GATGGCTATAGCAGAATGAGGTCGGGTCAGGACCCTCAAACACCATCTGGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp GTCTCCTCTGCAGAGCTACCAGGACTGCTGCGTGCTGGGACCAGGACCTCCATCGCTGAGGCAGCTGTCTaGTTTGGAGACTTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: VSSAELPGLLRAGTRTSIAEAAV*FGDLLC
Trigger: ACAGAGCAAGTCTCCAAATCAGACAGCTGCCTCAGC...GATGGAGGTCCTGGTCCCAGCACGCAGCAGTCCTGGTAGCTCTGCAGAGGAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp GTATTTGTGGCGTATCTGGCGCTTGTCAGTGTGGGGCCCAGGCCTGATGAGCCACAGCCATGTGGTGGATaGCGGTGCTCAGAGAGAGGA +
Preference number: 4 (lower is better)
Translates to: VFVAYLALVSVGPRPDEPQPCGG*RCSERG
Trigger: TCCTCTCTCTGAGCACCGTCATCCACCACATGGCTG...TGGCTCATCAGGCCTGGGCCCCACACTGACAAGCGCCAGATACGCCACAAATAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp GCTGTGGCTTTGGGGATCAGAACTTCCCAGCTAGGGCTCCCACTGTTGGACTCACCATGGTGCTGGTGCTaGCACTACAGGACCACCACC +
Preference number: 4 (lower is better)
Translates to: AVALGIRTSQLGLPLLDSPWCWC*HYRTTT
Trigger: GGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATGG...TGAGTCCAACAGTGGGAGCCCTAGCTGGGAAGTTCTGATCCCCAAAGCCACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp GCTGTGGCTTTGGGGATCAGAACTTCCCAGCTAGGGCTCCCACTGTTGGACTCATTGCGCCTTTCTCTCTaGCTCGCTCACGCTGGCCGT +
Preference number: 4 (lower is better)
Translates to: AVALGIRTSQLGLPLLDSLRLSL*LAHAGR
Trigger: ACGGCCAGCGTGAGCGAGGCAGAGAGAAAGGCGCAA...TGAGTCCAACAGTGGGAGCCCTAGCTGGGAAGTTCTGATCCCCAAAGCCACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp GCTGGCTTCTGCTTCAGCTACTTCTCGGGTTCCTGTCTCCTCTGCAGAGCTACCTTGCGCCTTTCTCTCTaGCTCGCTCACGCTGGCCGT +
Preference number: 4 (lower is better)
Translates to: AGFCFSYFSGSCLLCRATLRLSL*LAHAGR
Trigger: ACGGCCAGCGTGAGCGAGGCAGAGAGAAAGGCGCAA...GGTAGCTCTGCAGAGGAGACAGGAACCCGAGAAGTAGCTGAAGCAGAAGCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp TGGATGACGGTGCTCAGAGAGAGGATTTGGGTCCTGCGGGAGGTGACAGCTGTTTGGGCGGTGACCACCTaGAGGGTGTCCTGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: WMTVLRERIWVLREVTAVWAVTT*RVSWKL
Trigger: CAACTTCCAGGACACCCTGCAGGTGGTCACCGCCCA...AACAGCTGTCACCTCCCGCAGGACCCAAATCCTCTCTCTGAGCACCGTCATCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp CACGTGTGCCTGGGATGTCCGGCTCTTCACAGGGGATCAGACTGCGGGTCACGTTCAAAGTCCAAGATCTaGTGCATCTGGGGCCGGATG +
Preference number: 4 (lower is better)
Translates to: HVCLGCPALHRGSDCGSRSKSKI*CIWGRM
Trigger: CATCCGGCCCCAGATGCAGCAGATCTTGGACTTTGA...ACGTGACCCGCAGTCTGATCCCCTGTGAAGAGCCGGACATCCCAGGCACACGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp CTAGGGCTCCCACTGTTGGACTCAGGGGACGGAGGCAGGCTAGCTGAAGGGGCAGGTGATGTTGGCCAGTaGCGTCTCAAAGTCCAAGAT +
Preference number: 4 (lower is better)
Translates to: LGLPLLDSGDGGRLAEGAGDVGQ*RLKVQD
Trigger: ATCTTGGACTTTGAGACGGCACTGGCCAACATCACC...TGCCCCTTCAGCTAGCCTGCCTCCGTCCCCTGAGTCCAACAGTGGGAGCCCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp CAGCTAGGGCTCCCACTGTTGGACTCAGGGGACGGAGGCAGGCTAGCTGAAGGGGGTGATGTTGGCCAGTaGCGTCTCAAAGTCCAAGAT +
Preference number: 4 (lower is better)
Translates to: QLGLPLLDSGDGGRLAEGGDVGQ*RLKVQD
Trigger: ATCTTGGACTTTGAGACGGCACTGGCCAACATCACC...CCCTTCAGCTAGCCTGCCTCCGTCCCCTGAGTCCAACAGTGGGAGCCCTAGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp CTGGCCTCCACACCTCTACTGGTCTCCACGCCCTTGCATGAGGTGACAGGAGCTGGTCTGCAGCTCGGCTaGCGTCACTTTGTGGTAGAT +
Preference number: 4 (lower is better)
Translates to: LASTPLLVSTPLHEVTGAGLQLG*RHFVVD
Trigger: ATCTACCACAAAGTGACGGCAGCCGAGCTGCAGACC...AGCTCCTGTCACCTCATGCAAGGGCGTGGAGACCAGTAGAGGTGTGGAGGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp GGGGATCAGACTGCGGGTCACGTTGAGAGCCAACACCATGGGCTCGGTTCCGGCCCATCCACTTCAGGGTaGTCAGGCTTTCCTCAAATG +
Preference number: 4 (lower is better)
Translates to: GDQTAGHVESQHHGLGSGPSTSG*SGFPQM
Trigger: CATTTGAGGAAAGCCTGAGCACCCTGAAGTGGATGG...GCCGGAACCGAGCCCATGGTGTTGGCTCTCAACGTGACCCGCAGTCTGATCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp GCGCACACGTGTGCCTGGGATGTCCGGCTCTTCACAGGGGATCAGACTGCGGGTCCACGACGACACCTATaGCACCAAAGTTTAAGGCCT +
Preference number: 4 (lower is better)
Translates to: AHTCAWDVRLFTGDQTAGPRRHL*HQSLRP
Trigger: AGGCCTTAAACTTTGGTGGCATAGGTGTCGTCGTGG...ACCCGCAGTCTGATCCCCTGTGAAGAGCCGGACATCCCAGGCACACGTGTGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp CCCGAATGCCTGCTGAAGGTGGCGCACACGTGTGCCTGGGATGTCCGGCTCTTCCCACGACGACACCTATaGCACCAAAGTTTAAGGCCT +
Preference number: 4 (lower is better)
Translates to: PECLLKVAHTCAWDVRLFPRRHL*HQSLRP
Trigger: AGGCCTTAAACTTTGGTGGCATAGGTGTCGTCGTGG...GAAGAGCCGGACATCCCAGGCACACGTGTGCGCCACCTTCAGCAGGCATTCGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp GTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGTCGTTCACGCTGTAGTTaGTGTACTGCTCTACCATGC +
Preference number: 4 (lower is better)
Translates to: VLVLTLQDHHPPRGRQEGRSRCS*CTALPC
Trigger: GCATGGTAGAGCAGTACAGCAACTACAGCGTGAACG...ACCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR GCA 90 bp GAGTGGGGAAGAGAGGGAGTAAATCAGTGGGGCTTCCCTTGTCCACAGGTTATTTTCTCCCCCAGGGTGTaGCGCCCGTTCACCGGCTCC +
Preference number: 4 (lower is better)
Translates to: EWGREGVNQWGFPCPQVIFSPRV*RPFTGS
Trigger: GGAGCCGGTGAACGGGCGGCACACCCTGGGGGAGAA...AATAACCTGTGGACAAGGGAAGCCCCACTGATTTACTCCCTCTCTTCCCCACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp GCTGTGGCTTTGGGGATCAGAACTTCCCAGCTAGGGCTCCCACTGTTGGACTCAAGGGTGGGGAGCGAGTaGTCAGCCCCGTTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: AVALGIRTSQLGLPLLDSRVGSE*SAPFFF
Trigger: GAAGAAGAACGGGGCTGAGCACTCGCTCCCCACCCT...TGAGTCCAACAGTGGGAGCCCTAGCTGGGAAGTTCTGATCCCCAAAGCCACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp TATAGCCATCAGTCCCCTGCTGTGGCTTTGGGGATCAGAACTTCCCAGCTAGGGGGGAGCTCTCAGGTGTaGGGACGGAGCACCAGACCT +
Preference number: 4 (lower is better)
Translates to: YSHQSPAVALGIRTSQLGGSSQV*GRSTRP
Trigger: AGGTCTGGTGCTCCGTCCGCACACCTGAGAGCTCCC...CCCTAGCTGGGAAGTTCTGATCCCCAAAGCCACAGCAGGGGACTGATGGCTATA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp CAGCTAGGGCTCCCACTGTTGGACTCAGGGGACGGAGGCAGGCTAGCTGAAGGGAGTCTCGATTCAGGGTaGTTGGTGTTCCCAGATGGT +
Preference number: 4 (lower is better)
Translates to: QLGLPLLDSGDGGRLAEGSLDSG*LVFPDG
Trigger: ACCATCTGGGAACACCAAGCACCCTGAATCGAGACT...CCCTTCAGCTAGCCTGCCTCCGTCCCCTGAGTCCAACAGTGGGAGCCCTAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp CCCATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGAGTCTCGATTCAGGGTaGTTGGTGTTCCCAGATGGT +
Preference number: 4 (lower is better)
Translates to: PMVLVLTLQDHHPPRGRQSLDSG*LVFPDG
Trigger: ACCATCTGGGAACACCAAGCACCCTGAATCGAGACT...CTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp TATAGCCATCAGTCCCCTGCTGTGGCTTTGGGGATCAGAACTTCCCAGCTAGGGACCCCGCAGGGCTCCTaGAGTCTCGATTCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: YSHQSPAVALGIRTSQLGTPQGS*SLDSGC
Trigger: GCACCCTGAATCGAGACTGCAGGAGCCCTGCGGGGT...CCCTAGCTGGGAAGTTCTGATCCCCAAAGCCACAGCAGGGGACTGATGGCTATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp GAGTGGGGAAGAGAGGGAGTAAATCAGTGGGGCTTCCCTTGTCCACAGGTTATTGCTGTGGAGGGCACGTaGTGCCCCCACCTCCGTCTC +
Preference number: 4 (lower is better)
Translates to: EWGREGVNQWGFPCPQVIAVEGT*CPHLRL
Trigger: GAGACGGAGGTGGGGGCAGCACGTGCCCTCCACAGC...AATAACCTGTGGACAAGGGAAGCCCCACTGATTTACTCCCTCTCTTCCCCACTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp TTGAGGGTCCTGACCCGACCTCATTCTGCTATAGCCATCAGTCCCCTGCTGTGGGTGGCCATCAGGGACTaGGTTGGCCTTGATCCAGCC +
Preference number: 4 (lower is better)
Translates to: LRVLTRPHSAIAISPLLWVAIRD*VGLDPA
Trigger: GGCTGGATCAAGGCCAACCCAGTCCCTGATGGCCAC...CCACAGCAGGGGACTGATGGCTATAGCAGAATGAGGTCGGGTCAGGACCCTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp CAGCTAGGGCTCCCACTGTTGGACTCAGGGGACGGAGGCAGGCTAGCTGAAGGGGGATCACGTTGCTGTTaGAGTTCTTGGAATCGGCAC +
Preference number: 4 (lower is better)
Translates to: QLGLPLLDSGDGGRLAEGGSRCC*SSWNRH
Trigger: GTGCCGATTCCAAGAACTCCAACAGCAACGTGATCC...CCCTTCAGCTAGCCTGCCTCCGTCCCCTGAGTCCAACAGTGGGAGCCCTAGCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp GGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGTCGGGGCTATCATGTTGTAGATaGCATCGGCCTTTTCCTTGG +
Preference number: 4 (lower is better)
Translates to: GADTTGPPPSTRKAGGSGLSCCR*HRPFPW
Trigger: CCAAGGAAAAGGCCGATGCCATCTACAACATGATAG...CCCCGACCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CCA 90 bp CCTGCACCAGCTTGGAGGCAGATCCCAAGGTGGCAGGGGTGTCCCTGTGCCGTCCAAAGTTTAAGGCCTTaGGTGAGGAGCGTGTGTAGA +
Preference number: 4 (lower is better)
Translates to: PAPAWRQIPRWQGCPCAVQSLRP*VRSVCR
Trigger: TCTACACACGCTCCTCACCCAAGGCCTTAAACTTTG...GACGGCACAGGGACACCCCTGCCACCTTGGGATCTGCCTCCAAGCTGGTGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp GCTGTGGCTTTGGGGATCAGAACTTCCCAGCTAGGGCTCCCACTGTTGGACTCAGTGATGAGGCCTTCGTaGGAGCTCTCAGGTGTGCGG +
Preference number: 4 (lower is better)
Translates to: AVALGIRTSQLGLPLLDSVMRPS*ELSGVR
Trigger: CCGCACACCTGAGAGCTCCCACGAAGGCCTCATCAC...TGAGTCCAACAGTGGGAGCCCTAGCTGGGAAGTTCTGATCCCCAAAGCCACAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp TTGAGGGTCCTGACCCGACCTCATTCTGCTATAGCCATCAGTCCCCTGCTGTGGGTGATGAGGCCTTCGTaGGAGCTCTCAGGTGTGCGG +
Preference number: 4 (lower is better)
Translates to: LRVLTRPHSAIAISPLLWVMRPS*ELSGVR
Trigger: CCGCACACCTGAGAGCTCCCACGAAGGCCTCATCAC...CCACAGCAGGGGACTGATGGCTATAGCAGAATGAGGTCGGGTCAGGACCCTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp CAGCTAGGGCTCCCACTGTTGGACTCAGGGGACGGAGGCAGGCTAGCTGAAGGGGTTCTGAGAACTCCTTaGAATTGGAGAGGGAGCCGA +
Preference number: 4 (lower is better)
Translates to: QLGLPLLDSGDGGRLAEGVLRTP*NWRGSR
Trigger: TCGGCTCCCTCTCCAATTCCAAGGAGTTCTCAGAAC...CCCTTCAGCTAGCCTGCCTCCGTCCCCTGAGTCCAACAGTGGGAGCCCTAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp GTCTCCTCTGCAGAGCTACCAGGACTGCTGCGTGCTGGGACCAGGACCTCCATCTATTTGTGGCGTATCTaGCGCTTGTCAGTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: VSSAELPGLLRAGTRTSIYLWRI*RLSVWG
Trigger: GCCCCACACTGACAAGCGCCAGATACGCCACAAATA...GATGGAGGTCCTGGTCCCAGCACGCAGCAGTCCTGGTAGCTCTGCAGAGGAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp TTGAGGGTCCTGACCCGACCTCATTCTGCTATAGCCATCAGTCCCCTGCTGTGGTGGAGACTTGCTCTGTaGCCCAGGGATCCGTGCCTC +
Preference number: 4 (lower is better)
Translates to: LRVLTRPHSAIAISPLLWWRLAL*PRDPCL
Trigger: GAGGCACGGATCCCTGGGCCACAGAGCAAGTCTCCA...CCACAGCAGGGGACTGATGGCTATAGCAGAATGAGGTCGGGTCAGGACCCTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp TTGAGGGTCCTGACCCGACCTCATTCTGCTATAGCCATCAGTCCCCTGCTGTGGGCTCCTCTCTCTGCCTaGCCTCCACACCTCTACTGG +
Preference number: 4 (lower is better)
Translates to: LRVLTRPHSAIAISPLLWAPLSA*PPHLYW
Trigger: CCAGTAGAGGTGTGGAGGCCAGGCAGAGAGAGGAGC...CCACAGCAGGGGACTGATGGCTATAGCAGAATGAGGTCGGGTCAGGACCCTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp GTATTTGTGGCGTATCTGGCGCTTGTCAGTGTGGGGCCCAGGCCTGATGAGCCACCCCTGCTGTGGCTTTaGGGATCAGAACTTCCCAGC +
Preference number: 4 (lower is better)
Translates to: VFVAYLALVSVGPRPDEPPLLWL*GSELPS
Trigger: GCTGGGAAGTTCTGATCCCCAAAGCCACAGCAGGGG...TGGCTCATCAGGCCTGGGCCCCACACTGACAAGCGCCAGATACGCCACAAATAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp CAGCCCGAAAAGGTGGGACTGAGAGGGGACACTTGTGGCCAGCAGTGTATCTCTACTAGAGGACTGGACTaGTCCTGGGAGCCAGGCCCA +
Preference number: 4 (lower is better)
Translates to: QPEKVGLRGDTCGQQCISTRGLD*SWEPGP
Trigger: TGGGCCTGGCTCCCAGGACCAGTCCAGTCCTCTAGT...AGAGATACACTGCTGGCCACAAGTGTCCCCTCTCAGTCCCACCTTTTCGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp TATAGCCATCAGTCCCCTGCTGTGGCTTTGGGGATCAGAACTTCCCAGCTAGGGCCCAGGGGCCGACAATaGACTGCAGCCCAGGGTAAG +
Preference number: 4 (lower is better)
Translates to: YSHQSPAVALGIRTSQLGPRGRQ*TAAQGK
Trigger: CTTACCCTGGGCTGCAGTCCATTGTCGGCCCCTGGG...CCCTAGCTGGGAAGTTCTGATCCCCAAAGCCACAGCAGGGGACTGATGGCTATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp GTTCCCAGATGGTGTTTGAGGGTCCTGACCCGACCTCATTCTGCTATAGCCATCGGCTTCCCCACTGGATaGCAGAGGCCGCTCCAGGTG +
Preference number: 4 (lower is better)
Translates to: VPRWCLRVLTRPHSAIAIGFPTG*QRPLQV
Trigger: CACCTGGAGCGGCCTCTGCCATCCAGTGGGGAAGCC...GATGGCTATAGCAGAATGAGGTCGGGTCAGGACCCTCAAACACCATCTGGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp AAGCATTTGACACAGTGGTATTTGTGGCGTATCTGGCGCTTGTCAGTGTGGGGCGGAAAGCGGTGGCTGTaGAGGGCACGTGCTGCCCCC +
Preference number: 4 (lower is better)
Translates to: KHLTQWYLWRIWRLSVWGGKRWL*RARAAP
Trigger: GGGGGCAGCACGTGCCCTCCACAGCCACCGCTTTCC...GCCCCACACTGACAAGCGCCAGATACGCCACAAATACCACTGTGTCAAATGCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp CAGCCCGAAAAGGTGGGACTGAGAGGGGACACTTGTGGCCAGCAGTGTATCTCTAGGGGACACCATGGCTaGGAGAAGCCCGCCTCTATG +
Preference number: 4 (lower is better)
Translates to: QPEKVGLRGDTCGQQCISRGHHG*EKPASM
Trigger: CATAGAGGCGGGCTTCTCCCAGCCATGGTGTCCCCT...AGAGATACACTGCTGGCCACAAGTGTCCCCTCTCAGTCCCACCTTTTCGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp CATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGCCTTTTCCTTGGCTaGTTTTCGGGTTTCCTCATC +
Preference number: 4 (lower is better)
Translates to: HGAGADTTGPPPSTRKAGGLFLG*FSGFLI
Trigger: GATGAGGAAACCCGAAAATCAGCCAAGGAAAAGGCC...TCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR TCA 90 bp CAAGCCCATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGGCCTTTTCCTTGGCTaGTTTTCGGGTTTCCTCATC +
Preference number: 4 (lower is better)
Translates to: QAHGAGADTTGPPPSTRKGLFLG*FSGFLI
Trigger: GATGAGGAAACCCGAAAATCAGCCAAGGAAAAGGCC...CTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATGGGCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR TCA 90 bp GGGGTGTCCCTGTGCCGTCTGCTTCCTCTCGGGCAGGAGGATTCCAGCTTCCCGCCCTCCATGAGAAGTTaGAAAACCGCATGGCATTTT +
Preference number: 4 (lower is better)
Translates to: GVSLCRLLPLGQEDSSFPPSMRS*KTAWHF
Trigger: AAAATGCCATGCGGTTTTTCAACTTCTCATGGAGGG...CGGGAAGCTGGAATCCTCCTGCCCGAGAGGAAGCAGACGGCACAGGGACACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp TGGATGACGGTGCTCAGAGAGAGGATTTGGGTCCTGCGGGAGGTGACAGCTGTTACTCGGTCTGACGCTTaGAGGCCTCCACGGATGAGT +
Preference number: 4 (lower is better)
Translates to: WMTVLRERIWVLREVTAVTRSDA*RPPRMS
Trigger: ACTCATCCGTGGAGGCCTTCAAGCGTCAGACCGAGT...AACAGCTGTCACCTCCCGCAGGACCCAAATCCTCTCTCTGAGCACCGTCATCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp CATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGCAGCGGAAGTGTTCTaGGAACTCCTTGGAATTGGA +
Preference number: 4 (lower is better)
Translates to: HGAGADTTGPPPSTRKAGAAEVF*ELLGIG
Trigger: TCCAATTCCAAGGAGTTCTCAGAACACTTCCGCTGC...TCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR TCA 90 bp CGATACCCTGCACCAGCTTGGAGGCAGATCCCAAGGTGGCAGGGGTGTCCCTGTGCAGCGGAAGTGTTCTaGGAACTCCTTGGAATTGGA +
Preference number: 4 (lower is better)
Translates to: RYPAPAWRQIPRWQGCPCAAEVF*ELLGIG
Trigger: TCCAATTCCAAGGAGTTCTCAGAACACTTCCGCTGC...ACAGGGACACCCCTGCCACCTTGGGATCTGCCTCCAAGCTGGTGCAGGGTATCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp GCTGGCTTCTGCTTCAGCTACTTCTCGGGTTCCTGTCTCCTCTGCAGAGCTACCCAGACTTCGCACTTGTaGGGCGGGTTCATGGGTGAG +
Preference number: 4 (lower is better)
Translates to: AGFCFSYFSGSCLLCRATQTSHL*GGFMGE
Trigger: CTCACCCATGAACCCGCCTCACAAGTGCGAAGTCTG...GGTAGCTCTGCAGAGGAGACAGGAACCCGAGAAGTAGCTGAAGCAGAAGCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp AAGCATTTGACACAGTGGTATTTGTGGCGTATCTGGCGCTTGTCAGTGTGGGGCGAAAACCCGCCAGTGTaGGGAAGCAGGGCCCCGGGT +
Preference number: 4 (lower is better)
Translates to: KHLTQWYLWRIWRLSVWGENPPV*GSRAPG
Trigger: ACCCGGGGCCCTGCTTCCTCACACTGGCGGGTTTTC...GCCCCACACTGACAAGCGCCAGATACGCCACAAATACCACTGTGTCAAATGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp CAGTCTCGATTCAGGGTGCTTGGTGTTCCCAGATGGTGTTTGAGGGTCCTGACCGACTGCGGGTCACGTTaGGAGCCAACACCATGGGCT +
Preference number: 4 (lower is better)
Translates to: QSRFRVLGVPRWCLRVLTDCGSR*EPTPWA
Trigger: AGCCCATGGTGTTGGCTCTCAACGTGACCCGCAGTC...GGTCAGGACCCTCAAACACCATCTGGGAACACCAAGCACCCTGAATCGAGACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp CAGCCCGAAAAGGTGGGACTGAGAGGGGACACTTGTGGCCAGCAGTGTATCTCTACACATCCCAGGGGCTaGGGCAGCTGTCTGATTTGG +
Preference number: 4 (lower is better)
Translates to: QPEKVGLRGDTCGQQCISTHPRG*GSCLIW
Trigger: CCAAATCAGACAGCTGCCTCAGCCCCTGGGATGTGT...AGAGATACACTGCTGGCCACAAGTGTCCCCTCTCAGTCCCACCTTTTCGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp AAGCATTTGACACAGTGGTATTTGTGGCGTATCTGGCGCTTGTCAGTGTGGGGCCGGAGGCAGGCTAGCTaGAGGGGCAGTGCCCATGAG +
Preference number: 4 (lower is better)
Translates to: KHLTQWYLWRIWRLSVWGRRQAS*RGSAHE
Trigger: CTCATGGGCACTGCCCCTTCAGCTAGCCTGCCTCCG...GCCCCACACTGACAAGCGCCAGATACGCCACAAATACCACTGTGTCAAATGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp GCTGTGGCTTTGGGGATCAGAACTTCCCAGCTAGGGCTCCCACTGTTGGACTCAACTTGGTGGCGCCCATaGGTCTGCTACTGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: AVALGIRTSQLGLPLLDSTWWRP*VCYWRS
Trigger: GCTTCTCCAGTAGCAGACTCATGGGCGCCACCAAGT...TGAGTCCAACAGTGGGAGCCCTAGCTGGGAAGTTCTGATCCCCAAAGCCACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp TGGATGACGGTGCTCAGAGAGAGGATTTGGGTCCTGCGGGAGGTGACAGCTGTTCTGTGGAAGTTCACCTaGAGGCCGTTGGGGTATGCG +
Preference number: 4 (lower is better)
Translates to: WMTVLRERIWVLREVTAVLWKFT*RPLGYA
Trigger: CGCATACCCCAACGGCCTGCAGGTGAACTTCCACAG...AACAGCTGTCACCTCCCGCAGGACCCAAATCCTCTCTCTGAGCACCGTCATCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp GCGCACACGTGTGCCTGGGATGTCCGGCTCTTCACAGGGGATCAGACTGCGGGTGAGGTGCTTGATGATTaGTTGGTTGTGTTCCCAGAG +
Preference number: 4 (lower is better)
Translates to: AHTCAWDVRLFTGDQTAGEVLDD*LVVFPE
Trigger: CTCTGGGAACACAACCAAGCAATCATCAAGCACCTC...ACCCGCAGTCTGATCCCCTGTGAAGAGCCGGACATCCCAGGCACACGTGTGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp ATCCCAAGGTGGCAGGGGTGTCCCTGTGCCGTCTGCTTCCTCTCGGGCAGGAGGGAGTTTTCGAGGAGGTaGTTGATGATTGCTTGGTTG +
Preference number: 4 (lower is better)
Translates to: IPRWQGCPCAVCFLSGRREFSRR*LMIAWL
Trigger: CAACCAAGCAATCATCAAGCACCTCCTCGAAAACTC...CCTCCTGCCCGAGAGGAAGCAGACGGCACAGGGACACCCCTGCCACCTTGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp GGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGGAGTTTTCGAGGAGGTaGTTGATGATTGCTTGGTTG +
Preference number: 4 (lower is better)
Translates to: GAGADTTGPPPSTRKAGGEFSRR*LMIAWL
Trigger: CAACCAAGCAATCATCAAGCACCTCCTCGAAAACTC...CCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR GCA 90 bp CTGCACCAGCTTGGAGGCAGATCCCAAGGTGGCAGGGGTGTCCCTGTGCCGTCTTCCTGGTCTCGTTCATaGACGCACGGTAGTATACTT +
Preference number: 4 (lower is better)
Translates to: LHQLGGRSQGGRGVPVPSSWSRS*THGSIL
Trigger: AAGTATACTACCGTGCGTGCATGAACGAGACCAGGA...AGACGGCACAGGGACACCCCTGCCACCTTGGGATCTGCCTCCAAGCTGGTGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp CTAGGGCTCCCACTGTTGGACTCAGGGGACGGAGGCAGGCTAGCTGAAGGGGCATCCTGGTCTCGTTCATaGACGCACGGTAGTATACTT +
Preference number: 4 (lower is better)
Translates to: LGLPLLDSGDGGRLAEGASWSRS*THGSIL
Trigger: AAGTATACTACCGTGCGTGCATGAACGAGACCAGGA...TGCCCCTTCAGCTAGCCTGCCTCCGTCCCCTGAGTCCAACAGTGGGAGCCCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp CCCATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGTCCTGGTCTCGTTCATaGACGCACGGTAGTATACTT +
Preference number: 4 (lower is better)
Translates to: PMVLVLTLQDHHPPRGRQSWSRS*THGSIL
Trigger: AAGTATACTACCGTGCGTGCATGAACGAGACCAGGA...CTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR GCA 90 bp CAGCCCGAAAAGGTGGGACTGAGAGGGGACACTTGTGGCCAGCAGTGTATCTCTAAGTCCAAGATCTGCTaGATCTGGGGCCGGATGGCC +
Preference number: 4 (lower is better)
Translates to: QPEKVGLRGDTCGQQCISKSKIC*IWGRMA
Trigger: GGCCATCCGGCCCCAGATGCAGCAGATCTTGGACTT...AGAGATACACTGCTGGCCACAAGTGTCCCCTCTCAGTCCCACCTTTTCGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp GTTCCCAGATGGTGTTTGAGGGTCCTGACCCGACCTCATTCTGCTATAGCCATCCCAGTTGATGGCGGGTaGCAAGGTCTGCAGCTCGGC +
Preference number: 4 (lower is better)
Translates to: VPRWCLRVLTRPHSAIAIPVDGG*QGLQLG
Trigger: GCCGAGCTGCAGACCTTGGCACCCGCCATCAACTGG...GATGGCTATAGCAGAATGAGGTCGGGTCAGGACCCTCAAACACCATCTGGGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp CGATACCCTGCACCAGCTTGGAGGCAGATCCCAAGGTGGCAGGGGTGTCCCTGTCCATCCACTTCAGGGTaGTCAGGCTTTCCTCAAATG +
Preference number: 4 (lower is better)
Translates to: RYPAPAWRQIPRWQGCPCPSTSG*SGFPQM
Trigger: CATTTGAGGAAAGCCTGAGCACCCTGAAGTGGATGG...ACAGGGACACCCCTGCCACCTTGGGATCTGCCTCCAAGCTGGTGCAGGGTATCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp CAAGCCCATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGCCATCCACTTCAGGGTaGTCAGGCTTTCCTCAAATG +
Preference number: 4 (lower is better)
Translates to: QAHGAGADTTGPPPSTRKPSTSG*SGFPQM
Trigger: CATTTGAGGAAAGCCTGAGCACCCTGAAGTGGATGG...CTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATGGGCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR GCA 90 bp CACGTGTGCCTGGGATGTCCGGCTCTTCACAGGGGATCAGACTGCGGGTCACGTCCACGACGACACCTATaGCACCAAAGTTTAAGGCCT +
Preference number: 4 (lower is better)
Translates to: HVCLGCPALHRGSDCGSRPRRHL*HQSLRP
Trigger: AGGCCTTAAACTTTGGTGGCATAGGTGTCGTCGTGG...ACGTGACCCGCAGTCTGATCCCCTGTGAAGAGCCGGACATCCCAGGCACACGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp CATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGACCACGACGACACCTATaGCACCAAAGTTTAAGGCCT +
Preference number: 4 (lower is better)
Translates to: HGAGADTTGPPPSTRKAGPRRHL*HQSLRP
Trigger: AGGCCTTAAACTTTGGTGGCATAGGTGTCGTCGTGG...TCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR GCA 90 bp TATAGCCATCAGTCCCCTGCTGTGGCTTTGGGGATCAGAACTTCCCAGCTAGGGGCCACCCTGCTCAGCTaGTCGGATCTGCTCCCAAAC +
Preference number: 4 (lower is better)
Translates to: YSHQSPAVALGIRTSQLGATLLS*SDLLPN
Trigger: GTTTGGGAGCAGATCCGAGCAGCTGAGCAGGGTGGC...CCCTAGCTGGGAAGTTCTGATCCCCAAAGCCACAGCAGGGGACTGATGGCTATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000357071.8
CDS-3UTR GCA 90 bp GCCAGCAGTGTATCTCTGACACAGTCTCACCCCGCAGGGCTCCTGCAGTCTCGATCTGATTTGGAGACTTaGTCTGTGGCCCAGGGATCC +
Preference number: 4 (lower is better)
Translates to: ASSVSLTQSHPAGLLQSRSDLET*SVAQGS
Trigger: GGATCCCTGGGCCACAGAGCAAGTCTCCAAATCAGA...TCGAGACTGCAGGAGCCCTGCGGGGTGAGACTGTGTCAGAGATACACTGCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp CAGCCCGAAAAGGTGGGACTGAGAGGGGACACTTGTGGCCAGCAGTGTATCTCTAACTGGGATTACAGGTaGCCACCACCACTCCCGGCT +
Preference number: 4 (lower is better)
Translates to: QPEKVGLRGDTCGQQCISNWDYR*PPPLPA
Trigger: AGCCGGGAGTGGTGGTGGGCACCTGTAATCCCAGTT...AGAGATACACTGCTGGCCACAAGTGTCCCCTCTCAGTCCCACCTTTTCGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp GTTCCCAGATGGTGTTTGAGGGTCCTGACCCGACCTCATTCTGCTATAGCCATCTGTCCCTGTGCCGTCTaGTTCCTCTCGGGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: VPRWCLRVLTRPHSAIAICPCAV*FLSGRR
Trigger: CCTCCTGCCCGAGAGGAAGCAGACGGCACAGGGACA...GATGGCTATAGCAGAATGAGGTCGGGTCAGGACCCTCAAACACCATCTGGGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp AAGCATTTGACACAGTGGTATTTGTGGCGTATCTGGCGCTTGTCAGTGTGGGGCGCAGGGGTGTCCCTGTaGCGTCTGCTTCCTCTCGGG +
Preference number: 4 (lower is better)
Translates to: KHLTQWYLWRIWRLSVWGAGVSL*RLLPLG
Trigger: CCCGAGAGGAAGCAGACGGCACAGGGACACCCCTGC...GCCCCACACTGACAAGCGCCAGATACGCCACAAATACCACTGTGTCAAATGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp TATAGCCATCAGTCCCCTGCTGTGGCTTTGGGGATCAGAACTTCCCAGCTAGGGACCAGGACTGCTGCGTaGTGGGACCAGGACCTCCAT +
Preference number: 4 (lower is better)
Translates to: YSHQSPAVALGIRTSQLGTRTAA*WDQDLH
Trigger: ATGGAGGTCCTGGTCCCAGCACGCAGCAGTCCTGGT...CCCTAGCTGGGAAGTTCTGATCCCCAAAGCCACAGCAGGGGACTGATGGCTATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp AAGCATTTGACACAGTGGTATTTGTGGCGTATCTGGCGCTTGTCAGTGTGGGGCTCACCTGCAGGCCGTTaGGGTATGCGTCGCCCTCGG +
Preference number: 4 (lower is better)
Translates to: KHLTQWYLWRIWRLSVWGSPAGR*GMRRPR
Trigger: CCGAGGGCGACGCATACCCCAACGGCCTGCAGGTGA...GCCCCACACTGACAAGCGCCAGATACGCCACAAATACCACTGTGTCAAATGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp GTATTTGTGGCGTATCTGGCGCTTGTCAGTGTGGGGCCCAGGCCTGATGAGCCAGAGGGGGATCTTGTCTaGTACTGGATGCCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: VFVAYLALVSVGPRPDEPEGDLV*YWMPSA
Trigger: AGCACTGGGCATCCAGTACCAGACAAGATCCCCCTC...TGGCTCATCAGGCCTGGGCCCCACACTGACAAGCGCCAGATACGCCACAAATAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp GCTGTGGCTTTGGGGATCAGAACTTCCCAGCTAGGGCTCCCACTGTTGGACTCACCACTGTGGGGTCCATaGAGCTCAAGATGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: AVALGIRTSQLGLPLLDSPLWGP*SSRWSW
Trigger: CCAGCTCCATCTTGAGCTCCATGGACCCCACAGTGG...TGAGTCCAACAGTGGGAGCCCTAGCTGGGAAGTTCTGATCCCCAAAGCCACAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp CAGTCTCGATTCAGGGTGCTTGGTGTTCCCAGATGGTGTTTGAGGGTCCTGACCGGCAGGGGTCCACTGTaGGGTCCATGGAGCTCAAGA +
Preference number: 4 (lower is better)
Translates to: QSRFRVLGVPRWCLRVLTGRGPL*GPWSSR
Trigger: TCTTGAGCTCCATGGACCCCACAGTGGACCCCTGCC...GGTCAGGACCCTCAAACACCATCTGGGAACACCAAGCACCCTGAATCGAGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp CAGTCTCGATTCAGGGTGCTTGGTGTTCCCAGATGGTGTTTGAGGGTCCTGACCCTGCCTCGCTCACGCTaGCCGTGGAGTTTTCGAGGA +
Preference number: 4 (lower is better)
Translates to: QSRFRVLGVPRWCLRVLTLPRSR*PWSFRG
Trigger: TCCTCGAAAACTCCACGGCCAGCGTGAGCGAGGCAG...GGTCAGGACCCTCAAACACCATCTGGGAACACCAAGCACCCTGAATCGAGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp CAGCCCGAAAAGGTGGGACTGAGAGGGGACACTTGTGGCCAGCAGTGTATCTCTACCTGCAGGGTGTCCTaGAAGTTGTCCTTGGCCCAG +
Preference number: 4 (lower is better)
Translates to: QPEKVGLRGDTCGQQCISTCRVS*KLSLAQ
Trigger: CTGGGCCAAGGACAACTTCCAGGACACCCTGCAGGT...AGAGATACACTGCTGGCCACAAGTGTCCCCTCTCAGTCCCACCTTTTCGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp CAGCCCGAAAAGGTGGGACTGAGAGGGGACACTTGTGGCCAGCAGTGTATCTCTAAGCCCAGGCCAGACTaGTCCACCTGGATCACGTTG +
Preference number: 4 (lower is better)
Translates to: QPEKVGLRGDTCGQQCISKPRPD*STWITL
Trigger: CAACGTGATCCAGGTGGACCAGTCTGGCCTGGGCTT...AGAGATACACTGCTGGCCACAAGTGTCCCCTCTCAGTCCCACCTTTTCGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp CCCGAATGCCTGCTGAAGGTGGCGCACACGTGTGCCTGGGATGTCCGGCTCTTCCATCGGCCTTTTCCTTaGCTGATTTTCGGGTTTCCT +
Preference number: 4 (lower is better)
Translates to: PECLLKVAHTCAWDVRLFHRPFP*LIFGFP
Trigger: AGGAAACCCGAAAATCAGCCAAGGAAAAGGCCGATG...GAAGAGCCGGACATCCCAGGCACACGTGTGCGCCACCTTCAGCAGGCATTCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp CAGTCTCGATTCAGGGTGCTTGGTGTTCCCAGATGGTGTTTGAGGGTCCTGACCGGAGCGTGTGTAGAATaGTGCCTGCAGGATCCCGGC +
Preference number: 4 (lower is better)
Translates to: QSRFRVLGVPRWCLRVLTGACVE*CLQDPG
Trigger: GCCGGGATCCTGCAGGCACCATTCTACACACGCTCC...GGTCAGGACCCTCAAACACCATCTGGGAACACCAAGCACCCTGAATCGAGACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp GGGGATCAGACTGCGGGTCACGTTGAGAGCCAACACCATGGGCTCGGTTCCGGCCAAAGTTTAAGGCCTTaGGTGAGGAGCGTGTGTAGA +
Preference number: 4 (lower is better)
Translates to: GDQTAGHVESQHHGLGSGQSLRP*VRSVCR
Trigger: TCTACACACGCTCCTCACCCAAGGCCTTAAACTTTG...GCCGGAACCGAGCCCATGGTGTTGGCTCTCAACGTGACCCGCAGTCTGATCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp TATAGCCATCAGTCCCCTGCTGTGGCTTTGGGGATCAGAACTTCCCAGCTAGGGCAATGCCCTGGAGGCTaGATGGGGGTCTCGTCCTCA +
Preference number: 4 (lower is better)
Translates to: YSHQSPAVALGIRTSQLGQCPGG*MGVSSS
Trigger: TGAGGACGAGACCCCCATCCAGCCTCCAGGGCATTG...CCCTAGCTGGGAAGTTCTGATCCCCAAAGCCACAGCAGGGGACTGATGGCTATA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp GGGGATCAGACTGCGGGTCACGTTGAGAGCCAACACCATGGGCTCGGTTCCGGCACACAGTGGTATTTGTaGCGTATCTGGCGCTTGTCA +
Preference number: 4 (lower is better)
Translates to: GDQTAGHVESQHHGLGSGTQWYL*RIWRLS
Trigger: TGACAAGCGCCAGATACGCCACAAATACCACTGTGT...GCCGGAACCGAGCCCATGGTGTTGGCTCTCAACGTGACCCGCAGTCTGATCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp CCCGAATGCCTGCTGAAGGTGGCGCACACGTGTGCCTGGGATGTCCGGCTCTTCACACAGTGGTATTTGTaGCGTATCTGGCGCTTGTCA +
Preference number: 4 (lower is better)
Translates to: PECLLKVAHTCAWDVRLFTQWYL*RIWRLS
Trigger: TGACAAGCGCCAGATACGCCACAAATACCACTGTGT...GAAGAGCCGGACATCCCAGGCACACGTGTGCGCCACCTTCAGCAGGCATTCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp CACGTGTGCCTGGGATGTCCGGCTCTTCACAGGGGATCAGACTGCGGGTCACGTATCAGTCCCCTGCTGTaGCTTTGGGGATCAGAACTT +
Preference number: 4 (lower is better)
Translates to: HVCLGCPALHRGSDCGSRISPLL*LWGSEL
Trigger: AAGTTCTGATCCCCAAAGCCACAGCAGGGGACTGAT...ACGTGACCCGCAGTCTGATCCCCTGTGAAGAGCCGGACATCCCAGGCACACGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp GTATTTGTGGCGTATCTGGCGCTTGTCAGTGTGGGGCCCAGGCCTGATGAGCCAAGCCTCCCGAGTAACTaGGATTACAGGTGCCCACCA +
Preference number: 4 (lower is better)
Translates to: VFVAYLALVSVGPRPDEPSLPSN*DYRCPP
Trigger: TGGTGGGCACCTGTAATCCCAGTTACTCGGGAGGCT...TGGCTCATCAGGCCTGGGCCCCACACTGACAAGCGCCAGATACGCCACAAATAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp GCTGGCTTCTGCTTCAGCTACTTCTCGGGTTCCTGTCTCCTCTGCAGAGCTACCAAGGCACTAGAGGACTaGACTGGTCCTGGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: AGFCFSYFSGSCLLCRATKALED*TGPGSQ
Trigger: CTGGCTCCCAGGACCAGTCCAGTCCTCTAGTGCCTT...GGTAGCTCTGCAGAGGAGACAGGAACCCGAGAAGTAGCTGAAGCAGAAGCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp GAGTGGGGAAGAGAGGGAGTAAATCAGTGGGGCTTCCCTTGTCCACAGGTTATTGCCTGGCTTCCCCACTaGATGGCAGAGGCCGCTCCA +
Preference number: 4 (lower is better)
Translates to: EWGREGVNQWGFPCPQVIAWLPH*MAEAAP
Trigger: TGGAGCGGCCTCTGCCATCCAGTGGGGAAGCCAGGC...AATAACCTGTGGACAAGGGAAGCCCCACTGATTTACTCCCTCTCTTCCCCACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp GAGTGGGGAAGAGAGGGAGTAAATCAGTGGGGCTTCCCTTGTCCACAGGTTATTGAGGCGGGAAAGCGGTaGCTGTGGAGGGCACGTGCT +
Preference number: 4 (lower is better)
Translates to: EWGREGVNQWGFPCPQVIEAGKR*LWRARA
Trigger: AGCACGTGCCCTCCACAGCCACCGCTTTCCCGCCTC...AATAACCTGTGGACAAGGGAAGCCCCACTGATTTACTCCCTCTCTTCCCCACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR CAA 72 bp TGCCTGGCCTCCACACCTCTACTGGTCTCCACGCCCTaGCATGAGGTGACAGGAGCTGAAATCACACATCCC +
Preference number: 4 (lower is better)
Translates to: CLASTPLLVSTP*HEVTGAEITHP
Trigger: GGGATGTGTGATTTCAGCTCCTGTCACCTCATGCAAGGGCGTGGAGACCAGTAGAGGTGTGGAGGCCAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp GCTGTGGCTTTGGGGATCAGAACTTCCCAGCTAGGGCTCCCACTGTTGGACTCAGATGGAGCTGGTCACTaGGACACAAGCTTCGCTCAG +
Preference number: 4 (lower is better)
Translates to: AVALGIRTSQLGLPLLDSDGAGH*DTSFAQ
Trigger: CTGAGCGAAGCTTGTGTCTCAGTGACCAGCTCCATC...TGAGTCCAACAGTGGGAGCCCTAGCTGGGAAGTTCTGATCCCCAAAGCCACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp CACGTGTGCCTGGGATGTCCGGCTCTTCACAGGGGATCAGACTGCGGGTCACGTTCTTGGAATCGGCACTaGCATAGACAGAGAAGAAGG +
Preference number: 4 (lower is better)
Translates to: HVCLGCPALHRGSDCGSRSWNRH*HRQRRR
Trigger: CCTTCTTCTCTGTCTATGTCAGTGCCGATTCCAAGA...ACGTGACCCGCAGTCTGATCCCCTGTGAAGAGCCGGACATCCCAGGCACACGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp CATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGATCTTGGAATCGGCACTaGCATAGACAGAGAAGAAGG +
Preference number: 4 (lower is better)
Translates to: HGAGADTTGPPPSTRKAGSWNRH*HRQRRR
Trigger: CCTTCTTCTCTGTCTATGTCAGTGCCGATTCCAAGA...TCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR TCA 90 bp GTATTTGTGGCGTATCTGGCGCTTGTCAGTGTGGGGCCCAGGCCTGATGAGCCATCACTTTGTGGTAGATaGGCTCCTCATCACGGCGCT +
Preference number: 4 (lower is better)
Translates to: VFVAYLALVSVGPRPDEPSLCGR*APHHGA
Trigger: AGCGCCGTGATGAGGAGCTCATCTACCACAAAGTGA...TGGCTCATCAGGCCTGGGCCCCACACTGACAAGCGCCAGATACGCCACAAATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp TATAGCCATCAGTCCCCTGCTGTGGCTTTGGGGATCAGAACTTCCCAGCTAGGGCGGCGAAGGTTGCTTTaGCAAACATGGGGCCCAACG +
Preference number: 4 (lower is better)
Translates to: YSHQSPAVALGIRTSQLGRRRLL*QTWGPT
Trigger: CGTTGGGCCCCATGTTTGTCAAAGCAACCTTCGCCG...CCCTAGCTGGGAAGTTCTGATCCCCAAAGCCACAGCAGGGGACTGATGGCTATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp GTTCCCAGATGGTGTTTGAGGGTCCTGACCCGACCTCATTCTGCTATAGCCATCGAAGGCCTCCACGGATaGGTTCTTCCACCATGGCCG +
Preference number: 4 (lower is better)
Translates to: VPRWCLRVLTRPHSAIAIEGLHG*VLPPWP
Trigger: CGGCCATGGTGGAAGAACTCATCCGTGGAGGCCTTC...GATGGCTATAGCAGAATGAGGTCGGGTCAGGACCCTCAAACACCATCTGGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp GTTCCCAGATGGTGTTTGAGGGTCCTGACCCGACCTCATTCTGCTATAGCCATCACCATGCACTCGGTCTaGCGCTTGAAGGCCTCCACG +
Preference number: 4 (lower is better)
Translates to: VPRWCLRVLTRPHSAIAITMHSV*RLKAST
Trigger: CGTGGAGGCCTTCAAGCGTCAGACCGAGTGCATGGT...GATGGCTATAGCAGAATGAGGTCGGGTCAGGACCCTCAAACACCATCTGGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp GAGTGGGGAAGAGAGGGAGTAAATCAGTGGGGCTTCCCTTGTCCACAGGTTATTAGAGCTGGTTATTGGTaGGGCCCAGGGTGGGGAGCG +
Preference number: 4 (lower is better)
Translates to: EWGREGVNQWGFPCPQVIRAGYW*GPGWGA
Trigger: CGCTCCCCACCCTGGGCCTCACCAATAACCAGCTCT...AATAACCTGTGGACAAGGGAAGCCCCACTGATTTACTCCCTCTCTTCCCCACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp CAGTCTCGATTCAGGGTGCTTGGTGTTCCCAGATGGTGTTTGAGGGTCCTGACCCAGACTTCGCACTTGTaGGGCGGGTTCATGGGTGAG +
Preference number: 4 (lower is better)
Translates to: QSRFRVLGVPRWCLRVLTQTSHL*GGFMGE
Trigger: CTCACCCATGAACCCGCCTCACAAGTGCGAAGTCTG...GGTCAGGACCCTCAAACACCATCTGGGAACACCAAGCACCCTGAATCGAGACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp AAGCATTTGACACAGTGGTATTTGTGGCGTATCTGGCGCTTGTCAGTGTGGGGCCACCCGAATGCCTGCTaGAGGTGGCGCACACGTGTG +
Preference number: 4 (lower is better)
Translates to: KHLTQWYLWRIWRLSVWGHPNAC*RWRTRV
Trigger: CACACGTGTGCGCCACCTTCAGCAGGCATTCGGGTG...GCCCCACACTGACAAGCGCCAGATACGCCACAAATACCACTGTGTCAAATGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp GCTGTGGCTTTGGGGATCAGAACTTCCCAGCTAGGGCTCCCACTGTTGGACTCACGCCCTTGCATGAGGTaGCAGGAGCTGAAATCACAC +
Preference number: 4 (lower is better)
Translates to: AVALGIRTSQLGLPLLDSRPCMR*QELKSH
Trigger: GTGTGATTTCAGCTCCTGTCACCTCATGCAAGGGCG...TGAGTCCAACAGTGGGAGCCCTAGCTGGGAAGTTCTGATCCCCAAAGCCACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp GCTGTGGCTTTGGGGATCAGAACTTCCCAGCTAGGGCTCCCACTGTTGGACTCATTGTCTGGTACTGGATaGCCAGTGCTGCCAAGCAGG +
Preference number: 4 (lower is better)
Translates to: AVALGIRTSQLGLPLLDSLSGTG*PVLPSR
Trigger: CCTGCTTGGCAGCACTGGGCATCCAGTACCAGACAA...TGAGTCCAACAGTGGGAGCCCTAGCTGGGAAGTTCTGATCCCCAAAGCCACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp CATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGAGGTGCTTGATGATTaGTTGGTTGTGTTCCCAGAG +
Preference number: 4 (lower is better)
Translates to: HGAGADTTGPPPSTRKAGEVLDD*LVVFPE
Trigger: CTCTGGGAACACAACCAAGCAATCATCAAGCACCTC...TCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR GCA 90 bp CAGCTAGGGCTCCCACTGTTGGACTCAGGGGACGGAGGCAGGCTAGCTGAAGGGGAGTTTTCGAGGAGGTaGTTGATGATTGCTTGGTTG +
Preference number: 4 (lower is better)
Translates to: QLGLPLLDSGDGGRLAEGEFSRR*LMIAWL
Trigger: CAACCAAGCAATCATCAAGCACCTCCTCGAAAACTC...CCCTTCAGCTAGCCTGCCTCCGTCCCCTGAGTCCAACAGTGGGAGCCCTAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp TGGATGACGGTGCTCAGAGAGAGGATTTGGGTCCTGCGGGAGGTGACAGCTGTTGGTCTGCAGCTCGGCTaGCGTCACTTTGTGGTAGAT +
Preference number: 4 (lower is better)
Translates to: WMTVLRERIWVLREVTAVGLQLG*RHFVVD
Trigger: ATCTACCACAAAGTGACGGCAGCCGAGCTGCAGACC...AACAGCTGTCACCTCCCGCAGGACCCAAATCCTCTCTCTGAGCACCGTCATCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp GGGGTGTCCCTGTGCCGTCTGCTTCCTCTCGGGCAGGAGGATTCCAGCTTCCCGCAGGCTTTCCTCAAATaGCTTCTTAATCTCCAGGAT +
Preference number: 4 (lower is better)
Translates to: GVSLCRLLPLGQEDSSFPQAFLK*LLNLQD
Trigger: ATCCTGGAGATTAAGAAGGCATTTGAGGAAAGCCTG...CGGGAAGCTGGAATCCTCCTGCCCGAGAGGAAGCAGACGGCACAGGGACACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp CTGGCCTCCACACCTCTACTGGTCTCCACGCCCTTGCATGAGGTGACAGGAGCTCGTTCACGCTGTAGTTaGTGTACTGCTCTACCATGC +
Preference number: 4 (lower is better)
Translates to: LASTPLLVSTPLHEVTGARSRCS*CTALPC
Trigger: GCATGGTAGAGCAGTACAGCAACTACAGCGTGAACG...AGCTCCTGTCACCTCATGCAAGGGCGTGGAGACCAGTAGAGGTGTGGAGGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp GCTGGCTTCTGCTTCAGCTACTTCTCGGGTTCCTGTCTCCTCTGCAGAGCTACCGGTTCCTGTCTCCTCTaGAGAGCTACCAGGACTGCT +
Preference number: 4 (lower is better)
Translates to: AGFCFSYFSGSCLLCRATGSCLL*RATRTA
Trigger: AGCAGTCCTGGTAGCTCTGCAGAGGAGACAGGAACC...GGTAGCTCTGCAGAGGAGACAGGAACCCGAGAAGTAGCTGAAGCAGAAGCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp CAGCCCGAAAAGGTGGGACTGAGAGGGGACACTTGTGGCCAGCAGTGTATCTCTACTGCGGCTGGCTTCTaGTTCAGCTACTTCTCGGGT +
Preference number: 4 (lower is better)
Translates to: QPEKVGLRGDTCGQQCISTAAGF*FSYFSG
Trigger: ACCCGAGAAGTAGCTGAAGCAGAAGCCAGCCGCAGT...AGAGATACACTGCTGGCCACAAGTGTCCCCTCTCAGTCCCACCTTTTCGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp CATCTAGCTGCAAGTACTATCTTGATTCAACCCAGGGGCCGACAATGGACTGCACCACTCCGGGGGCTGTaGAAGTTCACCTGCAGGCCG +
Preference number: 4 (lower is better)
Translates to: HLAASTILIQPRGRQWTAPLRGL*KFTCRP
Trigger: CGGCCTGCAGGTGAACTTCCACAGCCCCCGGAGTGG...TGCAGTCCATTGTCGGCCCCTGGGTTGAATCAAGATAGTACTTGCAGCTAGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp GCTGTGGCTTTGGGGATCAGAACTTCCCAGCTAGGGCTCCCACTGTTGGACTCAGAGGGGGATCTTGTCTaGTACTGGATGCCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: AVALGIRTSQLGLPLLDSEGDLV*YWMPSA
Trigger: AGCACTGGGCATCCAGTACCAGACAAGATCCCCCTC...TGAGTCCAACAGTGGGAGCCCTAGCTGGGAAGTTCTGATCCCCAAAGCCACAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp GCTGGCTTCTGCTTCAGCTACTTCTCGGGTTCCTGTCTCCTCTGCAGAGCTACCGAGGGGGATCTTGTCTaGTACTGGATGCCCAGTGCT +
Preference number: 4 (lower is better)
Translates to: AGFCFSYFSGSCLLCRATEGDLV*YWMPSA
Trigger: AGCACTGGGCATCCAGTACCAGACAAGATCCCCCTC...GGTAGCTCTGCAGAGGAGACAGGAACCCGAGAAGTAGCTGAAGCAGAAGCCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp CAGCTAGGGCTCCCACTGTTGGACTCAGGGGACGGAGGCAGGCTAGCTGAAGGGTGCTTGATGATTGCTTaGTTGTGTTCCCAGAGGTTG +
Preference number: 4 (lower is better)
Translates to: QLGLPLLDSGDGGRLAEGCLMIA*LCSQRL
Trigger: CAACCTCTGGGAACACAACCAAGCAATCATCAAGCA...CCCTTCAGCTAGCCTGCCTCCGTCCCCTGAGTCCAACAGTGGGAGCCCTAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp GTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGTTGCTTGATGATTGCTTaGTTGTGTTCCCAGAGGTTG +
Preference number: 4 (lower is better)
Translates to: VLVLTLQDHHPPRGRQEGCLMIA*LCSQRL
Trigger: CAACCTCTGGGAACACAACCAAGCAATCATCAAGCA...ACCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CCA 90 bp GCTGTGGCTTTGGGGATCAGAACTTCCCAGCTAGGGCTCCCACTGTTGGACTCACCAGACTGGTCCACCTaGATCACGTTGCTGTTGGAG +
Preference number: 4 (lower is better)
Translates to: AVALGIRTSQLGLPLLDSPDWST*ITLLLE
Trigger: CTCCAACAGCAACGTGATCCAGGTGGACCAGTCTGG...TGAGTCCAACAGTGGGAGCCCTAGCTGGGAAGTTCTGATCCCCAAAGCCACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp CAGCTAGGGCTCCCACTGTTGGACTCAGGGGACGGAGGCAGGCTAGCTGAAGGGCTATCATGTTGTAGATaGCATCGGCCTTTTCCTTGG +
Preference number: 4 (lower is better)
Translates to: QLGLPLLDSGDGGRLAEGLSCCR*HRPFPW
Trigger: CCAAGGAAAAGGCCGATGCCATCTACAACATGATAG...CCCTTCAGCTAGCCTGCCTCCGTCCCCTGAGTCCAACAGTGGGAGCCCTAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp CCCATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGCTATCATGTTGTAGATaGCATCGGCCTTTTCCTTGG +
Preference number: 4 (lower is better)
Translates to: PMVLVLTLQDHHPPRGRQLSCCR*HRPFPW
Trigger: CCAAGGAAAAGGCCGATGCCATCTACAACATGATAG...CTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CCA 90 bp TTGAGGGTCCTGACCCGACCTCATTCTGCTATAGCCATCAGTCCCCTGCTGTGGCTCCTGTCTCAGGGGTaGTCTGGTTCCCACAGATTC +
Preference number: 4 (lower is better)
Translates to: LRVLTRPHSAIAISPLLWLLSQG*SGSHRF
Trigger: GAATCTGTGGGAACCAGACCACCCCTGAGACAGGAG...CCACAGCAGGGGACTGATGGCTATAGCAGAATGAGGTCGGGTCAGGACCCTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357071.8
CDS-3UTR CCA 90 bp GTTCCCAGATGGTGTTTGAGGGTCCTGACCCGACCTCATTCTGCTATAGCCATCTGGAGACTTGCTCTGTaGCCCAGGGATCCGTGCCTC +
Preference number: 4 (lower is better)
Translates to: VPRWCLRVLTRPHSAIAIWRLAL*PRDPCL
Trigger: GAGGCACGGATCCCTGGGCCACAGAGCAAGTCTCCA...GATGGCTATAGCAGAATGAGGTCGGGTCAGGACCCTCAAACACCATCTGGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp CGATACCCTGCACCAGCTTGGAGGCAGATCCCAAGGTGGCAGGGGTGTCCCTGTTCGATTCAGGGTGCTTaGTGTTCCCAGATGGTGTTT +
Preference number: 4 (lower is better)
Translates to: RYPAPAWRQIPRWQGCPCSIQGA*CSQMVF
Trigger: AAACACCATCTGGGAACACCAAGCACCCTGAATCGA...ACAGGGACACCCCTGCCACCTTGGGATCTGCCTCCAAGCTGGTGCAGGGTATCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp AAGCATTTGACACAGTGGTATTTGTGGCGTATCTGGCGCTTGTCAGTGTGGGGCAGACCCTGGTGTGGCTaGGATGGGGGACTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: KHLTQWYLWRIWRLSVWGRPWCG*DGGLLQ
Trigger: CTGCAGCAGTCCCCCATCCCAGCCACACCAGGGTCT...GCCCCACACTGACAAGCGCCAGATACGCCACAAATACCACTGTGTCAAATGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp GCTGTGGCTTTGGGGATCAGAACTTCCCAGCTAGGGCTCCCACTGTTGGACTCAGGGGAAATGGGGCTATaGCCTGTGCTTCAGTCAGGA +
Preference number: 4 (lower is better)
Translates to: AVALGIRTSQLGLPLLDSGEMGL*PVLQSG
Trigger: TCCTGACTGAAGCACAGGCCATAGCCCCATTTCCCC...TGAGTCCAACAGTGGGAGCCCTAGCTGGGAAGTTCTGATCCCCAAAGCCACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp CATCTAGCTGCAAGTACTATCTTGATTCAACCCAGGGGCCGACAATGGACTGCAGCTCCTGGGCTCCCGTaGAGGTTAGCCCTGCAGGCA +
Preference number: 4 (lower is better)
Translates to: HLAASTILIQPRGRQWTAAPGLP*RLALQA
Trigger: TGCCTGCAGGGCTAACCTCCACGGGAGCCCAGGAGC...TGCAGTCCATTGTCGGCCCCTGGGTTGAATCAAGATAGTACTTGCAGCTAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp CAGTCTCGATTCAGGGTGCTTGGTGTTCCCAGATGGTGTTTGAGGGTCCTGACCCACCACAGGCCAGACTaGGTGGAGGAATCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: QSRFRVLGVPRWCLRVLTHHRPD*VEESSP
Trigger: AGGGGAAGATTCCTCCACCCAGTCTGGCCTGTGGTG...GGTCAGGACCCTCAAACACCATCTGGGAACACCAAGCACCCTGAATCGAGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp CAGCCCGAAAAGGTGGGACTGAGAGGGGACACTTGTGGCCAGCAGTGTATCTCTCAAGGGGACTGCGGCTaGCTTCTGCTTCAGCTACTT +
Preference number: 4 (lower is better)
Translates to: QPEKVGLRGDTCGQQCISQGDCG*LLLQLL
Trigger: AAGTAGCTGAAGCAGAAGCCAGCCGCAGTCCCCTTG...AGAGATACACTGCTGGCCACAAGTGTCCCCTCTCAGTCCCACCTTTTCGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR CAA 72 bp CATTTGACACAGTGGTATTTGTGGCGTATCTGGCGCTaGTCAGTGTGGGGCCCAGGCCTGATGAGCCACCAG +
Preference number: 4 (lower is better)
Translates to: HLTQWYLWRIWR*SVWGPGLMSHQ
Trigger: CTGGTGGCTCATCAGGCCTGGGCCCCACACTGACAAGCGCCAGATACGCCACAAATACCACTGTGTCAAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp CAGTCTCGATTCAGGGTGCTTGGTGTTCCCAGATGGTGTTTGAGGGTCCTGACCTTAGAGGTTTGGCCCTaGGCTCCTCGATCCTGGTCT +
Preference number: 4 (lower is better)
Translates to: QSRFRVLGVPRWCLRVLTLEVWP*APRSWS
Trigger: AGACCAGGATCGAGGAGCTCAGGGCCAAACCTCTAA...GGTCAGGACCCTCAAACACCATCTGGGAACACCAAGCACCCTGAATCGAGACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp CATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGACCCTCCATGAGAAGTTaGAAAACCGCATGGCATTTT +
Preference number: 4 (lower is better)
Translates to: HGAGADTTGPPPSTRKAGPSMRS*KTAWHF
Trigger: AAAATGCCATGCGGTTTTTCAACTTCTCATGGAGGG...TCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR TCA 90 bp GTTCCCAGATGGTGTTTGAGGGTCCTGACCCGACCTCATTCTGCTATAGCCATCACTCGGTCTGACGCTTaGAGGCCTCCACGGATGAGT +
Preference number: 4 (lower is better)
Translates to: VPRWCLRVLTRPHSAIAITRSDA*RPPRMS
Trigger: ACTCATCCGTGGAGGCCTTCAAGCGTCAGACCGAGT...GATGGCTATAGCAGAATGAGGTCGGGTCAGGACCCTCAAACACCATCTGGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp GCCAGAGCTCCTGGGCTCCCGTGGAGGTTAGCCCTGCAGGCACCGGGGAAATGGAAATGTGTTTTTCCCTaGAGATTTCCAGTGTATTCC +
Preference number: 4 (lower is better)
Translates to: ARAPGLPWRLALQAPGKWKCVFP*RFPVYS
Trigger: GGAATACACTGGAAATCTTCAGGGAAAAACACATTT...CCATTTCCCCGGTGCCTGCAGGGCTAACCTCCACGGGAGCCCAGGAGCTCTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp GAGTGGGGAAGAGAGGGAGTAAATCAGTGGGGCTTCCCTTGTCCACAGGTTATTCCGAAAAGGTGGGACTaGGAGGGGACACTTGTGGCC +
Preference number: 4 (lower is better)
Translates to: EWGREGVNQWGFPCPQVIPKRWD*EGTLVA
Trigger: GGCCACAAGTGTCCCCTCTCAGTCCCACCTTTTCGG...AATAACCTGTGGACAAGGGAAGCCCCACTGATTTACTCCCTCTCTTCCCCACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp GAGTGGGGAAGAGAGGGAGTAAATCAGTGGGGCTTCCCTTGTCCACAGGTTATTGAGGTAACGGGCCCCTaGGATAGACATGGGACAGCC +
Preference number: 4 (lower is better)
Translates to: EWGREGVNQWGFPCPQVIEVTGP*DRHGTA
Trigger: GGCTGTCCCATGTCTATCTCAGGGGCCCGTTACCTC...AATAACCTGTGGACAAGGGAAGCCCCACTGATTTACTCCCTCTCTTCCCCACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp TATAGCCATCAGTCCCCTGCTGTGGCTTTGGGGATCAGAACTTCCCAGCTAGGGGGGTCCTGCGGGAGGTaGCAGCTGTTTCTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: YSHQSPAVALGIRTSQLGGSCGR*QLFLFS
Trigger: AGAAAAGAGAAACAGCTGTCACCTCCCGCAGGACCC...CCCTAGCTGGGAAGTTCTGATCCCCAAAGCCACAGCAGGGGACTGATGGCTATA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp GTTCCCAGATGGTGTTTGAGGGTCCTGACCCGACCTCATTCTGCTATAGCCATCACTTGGTGGCGCCCATaGGTCTGCTACTGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: VPRWCLRVLTRPHSAIAITWWRP*VCYWRS
Trigger: GCTTCTCCAGTAGCAGACTCATGGGCGCCACCAAGT...GATGGCTATAGCAGAATGAGGTCGGGTCAGGACCCTCAAACACCATCTGGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp AAGCATTTGACACAGTGGTATTTGTGGCGTATCTGGCGCTTGTCAGTGTGGGGCGCAGGCCACCAGTCCTaGCGCCAGAAGTACCACCAA +
Preference number: 4 (lower is better)
Translates to: KHLTQWYLWRIWRLSVWGAGHQS*RQKYHQ
Trigger: TTGGTGGTACTTCTGGCGGCAGGACTGGTGGCCTGC...GCCCCACACTGACAAGCGCCAGATACGCCACAAATACCACTGTGTCAAATGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp CTGGCCTCCACACCTCTACTGGTCTCCACGCCCTTGCATGAGGTGACAGGAGCTCCACCTGGATCACGTTaGTGTTGGAGTTCTTGGAAT +
Preference number: 4 (lower is better)
Translates to: LASTPLLVSTPLHEVTGAPPGSR*CWSSWN
Trigger: ATTCCAAGAACTCCAACAGCAACGTGATCCAGGTGG...AGCTCCTGTCACCTCATGCAAGGGCGTGGAGACCAGTAGAGGTGTGGAGGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp CCCGAATGCCTGCTGAAGGTGGCGCACACGTGTGCCTGGGATGTCCGGCTCTTCATGAGAGTGGAGATCTaGTCAAGGTATTCCTTGTCA +
Preference number: 4 (lower is better)
Translates to: PECLLKVAHTCAWDVRLFMRVEI*SRYSLS
Trigger: TGACAAGGAATACCTTGAGCAGATCTCCACTCTCAT...GAAGAGCCGGACATCCCAGGCACACGTGTGCGCCACCTTCAGCAGGCATTCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp CCCATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGATGAGAGTGGAGATCTaGTCAAGGTATTCCTTGTCA +
Preference number: 4 (lower is better)
Translates to: PMVLVLTLQDHHPPRGRQMRVEI*SRYSLS
Trigger: TGACAAGGAATACCTTGAGCAGATCTCCACTCTCAT...CTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR GCA 90 bp TATAGCCATCAGTCCCCTGCTGTGGCTTTGGGGATCAGAACTTCCCAGCTAGGGGTCCTCGGCGAAGGTTaGTTTGACAAACATGGGGCC +
Preference number: 4 (lower is better)
Translates to: YSHQSPAVALGIRTSQLGVLGEG*FDKHGA
Trigger: GGCCCCATGTTTGTCAAAGCAACCTTCGCCGAGGAC...CCCTAGCTGGGAAGTTCTGATCCCCAAAGCCACAGCAGGGGACTGATGGCTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp CTAGGGCTCCCACTGTTGGACTCAGGGGACGGAGGCAGGCTAGCTGAAGGGGCAGTAGAGGTCTGGAACTaGAGTGTAGTCATTAAACAC +
Preference number: 4 (lower is better)
Translates to: LGLPLLDSGDGGRLAEGAVEVWN*SVVIKH
Trigger: GTGTTTAATGACTACACTGCAGTTCCAGACCTCTAC...TGCCCCTTCAGCTAGCCTGCCTCCGTCCCCTGAGTCCAACAGTGGGAGCCCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp GTATTTGTGGCGTATCTGGCGCTTGTCAGTGTGGGGCCCAGGCCTGATGAGCCACGTTCACGCTGTAGTTaGTGTACTGCTCTACCATGC +
Preference number: 4 (lower is better)
Translates to: VFVAYLALVSVGPRPDEPRSRCS*CTALPC
Trigger: GCATGGTAGAGCAGTACAGCAACTACAGCGTGAACG...TGGCTCATCAGGCCTGGGCCCCACACTGACAAGCGCCAGATACGCCACAAATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp GTTCCCAGATGGTGTTTGAGGGTCCTGACCCGACCTCATTCTGCTATAGCCATCAAGGAACAGCCACCCTaGTCAGCTGCTCGGATCTGC +
Preference number: 4 (lower is better)
Translates to: VPRWCLRVLTRPHSAIAIKEQPP*SAARIC
Trigger: GCAGATCCGAGCAGCTGAGCAGGGTGGCTGTTCCTT...GATGGCTATAGCAGAATGAGGTCGGGTCAGGACCCTCAAACACCATCTGGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357071.8
CDS-3UTR GCA 90 bp CATCTAGCTGCAAGTACTATCTTGATTCAACCCAGGGGCCGACAATGGACTGCAAGCCCAGCACCCGAATaGCTGCTGAAGGTGGCGCAC +
Preference number: 4 (lower is better)
Translates to: HLAASTILIQPRGRQWTASPAPE*LLKVAH
Trigger: GTGCGCCACCTTCAGCAGGCATTCGGGTGCTGGGCT...TGCAGTCCATTGTCGGCCCCTGGGTTGAATCAAGATAGTACTTGCAGCTAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp CAGCCCGAAAAGGTGGGACTGAGAGGGGACACTTGTGGCCAGCAGTGTATCTCTGACCCGACCTCATTCTaGTATAGCCATCAGTCCCCT +
Preference number: 4 (lower is better)
Translates to: QPEKVGLRGDTCGQQCISDPTSF*YSHQSP
Trigger: AGGGGACTGATGGCTATAGCAGAATGAGGTCGGGTC...AGAGATACACTGCTGGCCACAAGTGTCCCCTCTCAGTCCCACCTTTTCGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp CATCTAGCTGCAAGTACTATCTTGATTCAACCCAGGGGCCGACAATGGACTGCAACCCCGCAGGGCTCCTaGAGTCTCGATTCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: HLAASTILIQPRGRQWTATPQGS*SLDSGC
Trigger: GCACCCTGAATCGAGACTGCAGGAGCCCTGCGGGGT...TGCAGTCCATTGTCGGCCCCTGGGTTGAATCAAGATAGTACTTGCAGCTAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp CATCTAGCTGCAAGTACTATCTTGATTCAACCCAGGGGCCGACAATGGACTGCACCTCCTCGTCCAGCGTaGCCCGCTTGTACGTCGACA +
Preference number: 4 (lower is better)
Translates to: HLAASTILIQPRGRQWTAPPRPA*PACTST
Trigger: TGTCGACGTACAAGCGGGCCACGCTGGACGAGGAGG...TGCAGTCCATTGTCGGCCCCTGGGTTGAATCAAGATAGTACTTGCAGCTAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp ATCTTGAAAGCATTTGACACAGTGGTATTTGTGGCGTATCTGGCGCTTGTCAGTGCAGCCCAGCACCTCTaGCCACTCCGGGGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: ILKAFDTVVFVAYLALVSAAQHL*PLRGLW
Trigger: CCACAGCCCCCGGAGTGGCCAGAGGTGCTGGGCTGC...ACTGACAAGCGCCAGATACGCCACAAATACCACTGTGTCAAATGCTTTCAAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp CATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGATGCTTGATGATTGCTTaGTTGTGTTCCCAGAGGTTG +
Preference number: 4 (lower is better)
Translates to: HGAGADTTGPPPSTRKAGCLMIA*LCSQRL
Trigger: CAACCTCTGGGAACACAACCAAGCAATCATCAAGCA...TCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CCA 90 bp GAGTGGGGAAGAGAGGGAGTAAATCAGTGGGGCTTCCCTTGTCCACAGGTTATTCTGCCTCGCTCACGCTaGCCGTGGAGTTTTCGAGGA +
Preference number: 4 (lower is better)
Translates to: EWGREGVNQWGFPCPQVILPRSR*PWSFRG
Trigger: TCCTCGAAAACTCCACGGCCAGCGTGAGCGAGGCAG...AATAACCTGTGGACAAGGGAAGCCCCACTGATTTACTCCCTCTCTTCCCCACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp TATAGCCATCAGTCCCCTGCTGTGGCTTTGGGGATCAGAACTTCCCAGCTAGGGCCAGACTGGTCCACCTaGATCACGTTGCTGTTGGAG +
Preference number: 4 (lower is better)
Translates to: YSHQSPAVALGIRTSQLGPDWST*ITLLLE
Trigger: CTCCAACAGCAACGTGATCCAGGTGGACCAGTCTGG...CCCTAGCTGGGAAGTTCTGATCCCCAAAGCCACAGCAGGGGACTGATGGCTATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp CACGTGTGCCTGGGATGTCCGGCTCTTCACAGGGGATCAGACTGCGGGTCACGTCTATCATGTTGTAGATaGCATCGGCCTTTTCCTTGG +
Preference number: 4 (lower is better)
Translates to: HVCLGCPALHRGSDCGSRLSCCR*HRPFPW
Trigger: CCAAGGAAAAGGCCGATGCCATCTACAACATGATAG...ACGTGACCCGCAGTCTGATCCCCTGTGAAGAGCCGGACATCCCAGGCACACGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp GCCAGCAGTGTATCTCTGACACAGTCTCACCCCGCAGGGCTCCTGCAGTCTCGACAAAGTTTAAGGCCTTaGGTGAGGAGCGTGTGTAGA +
Preference number: 4 (lower is better)
Translates to: ASSVSLTQSHPAGLLQSRQSLRP*VRSVCR
Trigger: TCTACACACGCTCCTCACCCAAGGCCTTAAACTTTG...TCGAGACTGCAGGAGCCCTGCGGGGTGAGACTGTGTCAGAGATACACTGCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp TGGATGACGGTGCTCAGAGAGAGGATTTGGGTCCTGCGGGAGGTGACAGCTGTTTATTTGTGGCGTATCTaGCGCTTGTCAGTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: WMTVLRERIWVLREVTAVYLWRI*RLSVWG
Trigger: GCCCCACACTGACAAGCGCCAGATACGCCACAAATA...AACAGCTGTCACCTCCCGCAGGACCCAAATCCTCTCTCTGAGCACCGTCATCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp CCCGAATGCCTGCTGAAGGTGGCGCACACGTGTGCCTGGGATGTCCGGCTCTTCAAGCATTTGACACAGTaGTATTTGTGGCGTATCTGG +
Preference number: 4 (lower is better)
Translates to: PECLLKVAHTCAWDVRLFKHLTQ*YLWRIW
Trigger: CCAGATACGCCACAAATACCACTGTGTCAAATGCTT...GAAGAGCCGGACATCCCAGGCACACGTGTGCGCCACCTTCAGCAGGCATTCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp TGGATGACGGTGCTCAGAGAGAGGATTTGGGTCCTGCGGGAGGTGACAGCTGTTCTTGGTGTTCCCAGATaGTGTTTGAGGGTCCTGACC +
Preference number: 4 (lower is better)
Translates to: WMTVLRERIWVLREVTAVLGVPR*CLRVLT
Trigger: GGTCAGGACCCTCAAACACCATCTGGGAACACCAAG...AACAGCTGTCACCTCCCGCAGGACCCAAATCCTCTCTCTGAGCACCGTCATCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp GAGTGGGGAAGAGAGGGAGTAAATCAGTGGGGCTTCCCTTGTCCACAGGTTATTCAGGCACCGGGGAAATaGGGCTATGGCCTGTGCTTC +
Preference number: 4 (lower is better)
Translates to: EWGREGVNQWGFPCPQVIQAPGK*GYGLCF
Trigger: GAAGCACAGGCCATAGCCCCATTTCCCCGGTGCCTG...AATAACCTGTGGACAAGGGAAGCCCCACTGATTTACTCCCTCTCTTCCCCACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR CAA 72 bp TCATTCTGCTATAGCCATCAGTCCCCTGCTGTGGCTTaGGGGATCAGAACTTCCCAGCTAGGGCTCCCACTG +
Preference number: 4 (lower is better)
Translates to: SFCYSHQSPAVA*GIRTSQLGLPL
Trigger: CAGTGGGAGCCCTAGCTGGGAAGTTCTGATCCCCAAAGCCACAGCAGGGGACTGATGGCTATAGCAGAATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp AAGCATTTGACACAGTGGTATTTGTGGCGTATCTGGCGCTTGTCAGTGTGGGGCTCTCCTGTGGGATGGTaGTGTTGGCCAGTGCCGTCT +
Preference number: 4 (lower is better)
Translates to: KHLTQWYLWRIWRLSVWGSPVGW*CWPVPS
Trigger: AGACGGCACTGGCCAACATCACCATCCCACAGGAGA...GCCCCACACTGACAAGCGCCAGATACGCCACAAATACCACTGTGTCAAATGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp TATAGCCATCAGTCCCCTGCTGTGGCTTTGGGGATCAGAACTTCCCAGCTAGGGTCACTTTGTGGTAGATaGGCTCCTCATCACGGCGCT +
Preference number: 4 (lower is better)
Translates to: YSHQSPAVALGIRTSQLGSLCGR*APHHGA
Trigger: AGCGCCGTGATGAGGAGCTCATCTACCACAAAGTGA...CCCTAGCTGGGAAGTTCTGATCCCCAAAGCCACAGCAGGGGACTGATGGCTATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp AAGCATTTGACACAGTGGTATTTGTGGCGTATCTGGCGCTTGTCAGTGTGGGGCCGGCGAAGGTTGCTTTaGCAAACATGGGGCCCAACG +
Preference number: 4 (lower is better)
Translates to: KHLTQWYLWRIWRLSVWGRRRLL*QTWGPT
Trigger: CGTTGGGCCCCATGTTTGTCAAAGCAACCTTCGCCG...GCCCCACACTGACAAGCGCCAGATACGCCACAAATACCACTGTGTCAAATGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp ATCTTGAAAGCATTTGACACAGTGGTATTTGTGGCGTATCTGGCGCTTGTCAGTCCCGATAGGCCGCCTTaGGACCCCCGTTGTCGGCGA +
Preference number: 4 (lower is better)
Translates to: ILKAFDTVVFVAYLALVSPDRPP*DPRCRR
Trigger: TCGCCGACAACGGGGGTCTCAAGGCGGCCTATCGGG...ACTGACAAGCGCCAGATACGCCACAAATACCACTGTGTCAAATGCTTTCAAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp ATCTTGAAAGCATTTGACACAGTGGTATTTGTGGCGTATCTGGCGCTTGTCAGTGGTGGCCAAGCGGGCTaGGCAATGCCCTGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: ILKAFDTVVFVAYLALVSGGQAG*AMPWRL
Trigger: CAGCCTCCAGGGCATTGCTCAGCCCGCTTGGCCACC...ACTGACAAGCGCCAGATACGCCACAAATACCACTGTGTCAAATGCTTTCAAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp GGGGTGTCCCTGTGCCGTCTGCTTCCTCTCGGGCAGGAGGATTCCAGCTTCCCGCCCAAAAATATATCTTaGAAGCATTTGACACAGTGG +
Preference number: 4 (lower is better)
Translates to: GVSLCRLLPLGQEDSSFPPKNIS*KHLTQW
Trigger: CCACTGTGTCAAATGCTTTCAAGATATATTTTTGGG...CGGGAAGCTGGAATCCTCCTGCCCGAGAGGAAGCAGACGGCACAGGGACACCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp GAGTGGGGAAGAGAGGGAGTAAATCAGTGGGGCTTCCCTTGTCCACAGGTTATTACACATCCCAGGGGCTaGGGCAGCTGTCTGATTTGG +
Preference number: 4 (lower is better)
Translates to: EWGREGVNQWGFPCPQVITHPRG*GSCLIW
Trigger: CCAAATCAGACAGCTGCCTCAGCCCCTGGGATGTGT...AATAACCTGTGGACAAGGGAAGCCCCACTGATTTACTCCCTCTCTTCCCCACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp ATCTTGAAAGCATTTGACACAGTGGTATTTGTGGCGTATCTGGCGCTTGTCAGTCGGCCCCGGCAGACCTaGGCCATGAGTGTGGTCTCC +
Preference number: 4 (lower is better)
Translates to: ILKAFDTVVFVAYLALVSRPRQT*AMSVVS
Trigger: GGAGACCACACTCATGGCTCAGGTCTGCCGGGGCCG...ACTGACAAGCGCCAGATACGCCACAAATACCACTGTGTCAAATGCTTTCAAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp GCCAGCAGTGTATCTCTGACACAGTCTCACCCCGCAGGGCTCCTGCAGTCTCGAGAGTTTTCGAGGAGGTaGTTGATGATTGCTTGGTTG +
Preference number: 4 (lower is better)
Translates to: ASSVSLTQSHPAGLLQSREFSRR*LMIAWL
Trigger: CAACCAAGCAATCATCAAGCACCTCCTCGAAAACTC...TCGAGACTGCAGGAGCCCTGCGGGGTGAGACTGTGTCAGAGATACACTGCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp AAGCATTTGACACAGTGGTATTTGTGGCGTATCTGGCGCTTGTCAGTGTGGGGCAAGTCCAAGATCTGCTaGATCTGGGGCCGGATGGCC +
Preference number: 4 (lower is better)
Translates to: KHLTQWYLWRIWRLSVWGKSKIC*IWGRMA
Trigger: GGCCATCCGGCCCCAGATGCAGCAGATCTTGGACTT...GCCCCACACTGACAAGCGCCAGATACGCCACAAATACCACTGTGTCAAATGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp GCTGGCTTCTGCTTCAGCTACTTCTCGGGTTCCTGTCTCCTCTGCAGAGCTACCGGTGATGTTGGCCAGTaGCGTCTCAAAGTCCAAGAT +
Preference number: 4 (lower is better)
Translates to: AGFCFSYFSGSCLLCRATGDVGQ*RLKVQD
Trigger: ATCTTGGACTTTGAGACGGCACTGGCCAACATCACC...GGTAGCTCTGCAGAGGAGACAGGAACCCGAGAAGTAGCTGAAGCAGAAGCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp CATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGACAGGCTTTCCTCAAATaGCTTCTTAATCTCCAGGAT +
Preference number: 4 (lower is better)
Translates to: HGAGADTTGPPPSTRKAGQAFLK*LLNLQD
Trigger: ATCCTGGAGATTAAGAAGGCATTTGAGGAAAGCCTG...TCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR GCA 90 bp GCTGTGGCTTTGGGGATCAGAACTTCCCAGCTAGGGCTCCCACTGTTGGACTCACCATCCACTTCAGGGTaGTCAGGCTTTCCTCAAATG +
Preference number: 4 (lower is better)
Translates to: AVALGIRTSQLGLPLLDSPSTSG*SGFPQM
Trigger: CATTTGAGGAAAGCCTGAGCACCCTGAAGTGGATGG...TGAGTCCAACAGTGGGAGCCCTAGCTGGGAAGTTCTGATCCCCAAAGCCACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp CGATACCCTGCACCAGCTTGGAGGCAGATCCCAAGGTGGCAGGGGTGTCCCTGTGTAGAGGTCTGGAACTaGAGTGTAGTCATTAAACAC +
Preference number: 4 (lower is better)
Translates to: RYPAPAWRQIPRWQGCPCVEVWN*SVVIKH
Trigger: GTGTTTAATGACTACACTGCAGTTCCAGACCTCTAC...ACAGGGACACCCCTGCCACCTTGGGATCTGCCTCCAAGCTGGTGCAGGGTATCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp CAAGCCCATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGTAGAGGTCTGGAACTaGAGTGTAGTCATTAAACAC +
Preference number: 4 (lower is better)
Translates to: QAHGAGADTTGPPPSTRKVEVWN*SVVIKH
Trigger: GTGTTTAATGACTACACTGCAGTTCCAGACCTCTAC...CTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATGGGCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR GCA 90 bp TATAGCCATCAGTCCCCTGCTGTGGCTTTGGGGATCAGAACTTCCCAGCTAGGGGACCCGACCTCATTCTaGTATAGCCATCAGTCCCCT +
Preference number: 4 (lower is better)
Translates to: YSHQSPAVALGIRTSQLGDPTSF*YSHQSP
Trigger: AGGGGACTGATGGCTATAGCAGAATGAGGTCGGGTC...CCCTAGCTGGGAAGTTCTGATCCCCAAAGCCACAGCAGGGGACTGATGGCTATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp GCCAGCAGTGTATCTCTGACACAGTCTCACCCCGCAGGGCTCCTGCAGTCTCGATGCTTGATGATTGCTTaGTTGTGTTCCCAGAGGTTG +
Preference number: 4 (lower is better)
Translates to: ASSVSLTQSHPAGLLQSRCLMIA*LCSQRL
Trigger: CAACCTCTGGGAACACAACCAAGCAATCATCAAGCA...TCGAGACTGCAGGAGCCCTGCGGGGTGAGACTGTGTCAGAGATACACTGCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp CAGCCCGAAAAGGTGGGACTGAGAGGGGACACTTGTGGCCAGCAGTGTATCTCTGGATCACGTTGCTGTTaGAGTTCTTGGAATCGGCAC +
Preference number: 4 (lower is better)
Translates to: QPEKVGLRGDTCGQQCISGSRCC*SSWNRH
Trigger: GTGCCGATTCCAAGAACTCCAACAGCAACGTGATCC...AGAGATACACTGCTGGCCACAAGTGTCCCCTCTCAGTCCCACCTTTTCGGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp GCTGTGGCTTTGGGGATCAGAACTTCCCAGCTAGGGCTCCCACTGTTGGACTCAGTTCTGAGAACTCCTTaGAATTGGAGAGGGAGCCGA +
Preference number: 4 (lower is better)
Translates to: AVALGIRTSQLGLPLLDSVLRTP*NWRGSR
Trigger: TCGGCTCCCTCTCCAATTCCAAGGAGTTCTCAGAAC...TGAGTCCAACAGTGGGAGCCCTAGCTGGGAAGTTCTGATCCCCAAAGCCACAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp CAGTCTCGATTCAGGGTGCTTGGTGTTCCCAGATGGTGTTTGAGGGTCCTGACCTATTTGTGGCGTATCTaGCGCTTGTCAGTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: QSRFRVLGVPRWCLRVLTYLWRI*RLSVWG
Trigger: GCCCCACACTGACAAGCGCCAGATACGCCACAAATA...GGTCAGGACCCTCAAACACCATCTGGGAACACCAAGCACCCTGAATCGAGACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp GTATTTGTGGCGTATCTGGCGCTTGTCAGTGTGGGGCCCAGGCCTGATGAGCCAACACAGTGGTATTTGTaGCGTATCTGGCGCTTGTCA +
Preference number: 4 (lower is better)
Translates to: VFVAYLALVSVGPRPDEPTQWYL*RIWRLS
Trigger: TGACAAGCGCCAGATACGCCACAAATACCACTGTGT...TGGCTCATCAGGCCTGGGCCCCACACTGACAAGCGCCAGATACGCCACAAATAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp GTTCCCAGATGGTGTTTGAGGGTCCTGACCCGACCTCATTCTGCTATAGCCATCGGCAGCTGTCTGATTTaGAGACTTGCTCTGTGGCCC +
Preference number: 4 (lower is better)
Translates to: VPRWCLRVLTRPHSAIAIGSCLI*RLALWP
Trigger: GGGCCACAGAGCAAGTCTCCAAATCAGACAGCTGCC...GATGGCTATAGCAGAATGAGGTCGGGTCAGGACCCTCAAACACCATCTGGGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp GAGTGGGGAAGAGAGGGAGTAAATCAGTGGGGCTTCCCTTGTCCACAGGTTATTCCTCCACACCTCTACTaGTCTCCACGCCCTTGCATG +
Preference number: 4 (lower is better)
Translates to: EWGREGVNQWGFPCPQVIPPHLY*SPRPCM
Trigger: CATGCAAGGGCGTGGAGACCAGTAGAGGTGTGGAGG...AATAACCTGTGGACAAGGGAAGCCCCACTGATTTACTCCCTCTCTTCCCCACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp AAGCATTTGACACAGTGGTATTTGTGGCGTATCTGGCGCTTGTCAGTGTGGGGCCCCCTGCTGTGGCTTTaGGGATCAGAACTTCCCAGC +
Preference number: 4 (lower is better)
Translates to: KHLTQWYLWRIWRLSVWGPLLWL*GSELPS
Trigger: GCTGGGAAGTTCTGATCCCCAAAGCCACAGCAGGGG...GCCCCACACTGACAAGCGCCAGATACGCCACAAATACCACTGTGTCAAATGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp AAGCATTTGACACAGTGGTATTTGTGGCGTATCTGGCGCTTGTCAGTGTGGGGCCACCACAGGCCAGACTaGGTGGAGGAATCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: KHLTQWYLWRIWRLSVWGHHRPD*VEESSP
Trigger: AGGGGAAGATTCCTCCACCCAGTCTGGCCTGTGGTG...GCCCCACACTGACAAGCGCCAGATACGCCACAAATACCACTGTGTCAAATGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp CAGTCTCGATTCAGGGTGCTTGGTGTTCCCAGATGGTGTTTGAGGGTCCTGACCACCAGGACCTCCATCTaGAATCCACTCTCGATACCC +
Preference number: 4 (lower is better)
Translates to: QSRFRVLGVPRWCLRVLTTRTSI*NPLSIP
Trigger: GGGTATCGAGAGTGGATTCCAGATGGAGGTCCTGGT...GGTCAGGACCCTCAAACACCATCTGGGAACACCAAGCACCCTGAATCGAGACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
3UTR CAA 72 bp TCTCGATTCAGGGTGCTTGGTGTTCCCAGATGGTGTTaGAGGGTCCTGACCCGACCTCATTCTGCTATAGCC +
Preference number: 4 (lower is better)
Translates to: SRFRVLGVPRWC*RVLTRPHSAIA
Trigger: GGCTATAGCAGAATGAGGTCGGGTCAGGACCCTCAAACACCATCTGGGAACACCAAGCACCCTGAATCGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
3UTR CAA 72 bp AGCCATGTGGTGGATGACGGTGCTCAGAGAGAGGATTaGGGTCCTGCGGGAGGTGACAGCTGTTTCTCTTTT +
Preference number: 4 (lower is better)
Translates to: SHVVDDGAQRED*GPAGGDSCFSF
Trigger: AAAAGAGAAACAGCTGTCACCTCCCGCAGGACCCAAATCCTCTCTCTGAGCACCGTCATCCACCACATGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp GAGTGGGGAAGAGAGGGAGTAAATCAGTGGGGCTTCCCTTGTCCACAGGTTATTGAAAAGGCAACCAGTTaGTGGCGGGTGCCAAGGTCT +
Preference number: 4 (lower is better)
Translates to: EWGREGVNQWGFPCPQVIEKATS*WRVPRS
Trigger: AGACCTTGGCACCCGCCATCAACTGGTTGCCTTTTC...AATAACCTGTGGACAAGGGAAGCCCCACTGATTTACTCCCTCTCTTCCCCACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp TATAGCCATCAGTCCCCTGCTGTGGCTTTGGGGATCAGAACTTCCCAGCTAGGGAGATCATGTAGTTGTTaGGCAGGCATCTGTCGGTGG +
Preference number: 4 (lower is better)
Translates to: YSHQSPAVALGIRTSQLGRSCSC*AGICRW
Trigger: CCACCGACAGATGCCTGCTCAACAACTACATGATCT...CCCTAGCTGGGAAGTTCTGATCCCCAAAGCCACAGCAGGGGACTGATGGCTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp GGGGATCAGACTGCGGGTCACGTTGAGAGCCAACACCATGGGCTCGGTTCCGGCAAATGTGTTTTTCCCTaGAGATTTCCAGTGTATTCC +
Preference number: 4 (lower is better)
Translates to: GDQTAGHVESQHHGLGSGKCVFP*RFPVYS
Trigger: GGAATACACTGGAAATCTTCAGGGAAAAACACATTT...GCCGGAACCGAGCCCATGGTGTTGGCTCTCAACGTGACCCGCAGTCTGATCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp CAGCCCGAAAAGGTGGGACTGAGAGGGGACACTTGTGGCCAGCAGTGTATCTCTTCCTGGTCTCGTTCATaGACGCACGGTAGTATACTT +
Preference number: 4 (lower is better)
Translates to: QPEKVGLRGDTCGQQCISSWSRS*THGSIL
Trigger: AAGTATACTACCGTGCGTGCATGAACGAGACCAGGA...AGAGATACACTGCTGGCCACAAGTGTCCCCTCTCAGTCCCACCTTTTCGGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp CTGGCCTCCACACCTCTACTGGTCTCCACGCCCTTGCATGAGGTGACAGGAGCTATGAGAGTGGAGATCTaGTCAAGGTATTCCTTGTCA +
Preference number: 4 (lower is better)
Translates to: LASTPLLVSTPLHEVTGAMRVEI*SRYSLS
Trigger: TGACAAGGAATACCTTGAGCAGATCTCCACTCTCAT...AGCTCCTGTCACCTCATGCAAGGGCGTGGAGACCAGTAGAGGTGTGGAGGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp GGGGATCAGACTGCGGGTCACGTTGAGAGCCAACACCATGGGCTCGGTTCCGGCAAGCATCCATCTAGCTaGAAGTACTATCTTGATTCA +
Preference number: 4 (lower is better)
Translates to: GDQTAGHVESQHHGLGSGKHPSS*KYYLDS
Trigger: TGAATCAAGATAGTACTTGCAGCTAGATGGATGCTT...GCCGGAACCGAGCCCATGGTGTTGGCTCTCAACGTGACCCGCAGTCTGATCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp GCTGGCTTCTGCTTCAGCTACTTCTCGGGTTCCTGTCTCCTCTGCAGAGCTACCTCGATTCAGGGTGCTTaGTGTTCCCAGATGGTGTTT +
Preference number: 4 (lower is better)
Translates to: AGFCFSYFSGSCLLCRATSIQGA*CSQMVF
Trigger: AAACACCATCTGGGAACACCAAGCACCCTGAATCGA...GGTAGCTCTGCAGAGGAGACAGGAACCCGAGAAGTAGCTGAAGCAGAAGCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp AAGCATTTGACACAGTGGTATTTGTGGCGTATCTGGCGCTTGTCAGTGTGGGGCAGCCTCCCGAGTAACTaGGATTACAGGTGCCCACCA +
Preference number: 4 (lower is better)
Translates to: KHLTQWYLWRIWRLSVWGSLPSN*DYRCPP
Trigger: TGGTGGGCACCTGTAATCCCAGTTACTCGGGAGGCT...GCCCCACACTGACAAGCGCCAGATACGCCACAAATACCACTGTGTCAAATGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp ATCTTGAAAGCATTTGACACAGTGGTATTTGTGGCGTATCTGGCGCTTGTCAGTGCTGTCTCCTTGGGGTaGAGACTGGCGGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: ILKAFDTVVFVAYLALVSAVSLG*RLAAAA
Trigger: GGCTGCAGCCGCCAGTCTCCACCCCAAGGAGACAGC...ACTGACAAGCGCCAGATACGCCACAAATACCACTGTGTCAAATGCTTTCAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp AAGCATTTGACACAGTGGTATTTGTGGCGTATCTGGCGCTTGTCAGTGTGGGGCACAGGCCAGACTGGGTaGAGGAATCTTCCCCTCACA +
Preference number: 4 (lower is better)
Translates to: KHLTQWYLWRIWRLSVWGTGQTG*RNLPLT
Trigger: TGTGAGGGGAAGATTCCTCCACCCAGTCTGGCCTGT...GCCCCACACTGACAAGCGCCAGATACGCCACAAATACCACTGTGTCAAATGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp GTTCCCAGATGGTGTTTGAGGGTCCTGACCCGACCTCATTCTGCTATAGCCATCAGATCATGTAGTTGTTaGGCAGGCATCTGTCGGTGG +
Preference number: 4 (lower is better)
Translates to: VPRWCLRVLTRPHSAIAIRSCSC*AGICRW
Trigger: CCACCGACAGATGCCTGCTCAACAACTACATGATCT...GATGGCTATAGCAGAATGAGGTCGGGTCAGGACCCTCAAACACCATCTGGGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp CACGTGTGCCTGGGATGTCCGGCTCTTCACAGGGGATCAGACTGCGGGTCACGTCCCAAAAATATATCTTaGAAGCATTTGACACAGTGG +
Preference number: 4 (lower is better)
Translates to: HVCLGCPALHRGSDCGSRPKNIS*KHLTQW
Trigger: CCACTGTGTCAAATGCTTTCAAGATATATTTTTGGG...ACGTGACCCGCAGTCTGATCCCCTGTGAAGAGCCGGACATCCCAGGCACACGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp GAGTGGGGAAGAGAGGGAGTAAATCAGTGGGGCTTCCCTTGTCCACAGGTTATTGCTGAGGCAGCTGTCTaGTTTGGAGACTTGCTCTGT +
Preference number: 4 (lower is better)
Translates to: EWGREGVNQWGFPCPQVIAEAAV*FGDLLC
Trigger: ACAGAGCAAGTCTCCAAATCAGACAGCTGCCTCAGC...AATAACCTGTGGACAAGGGAAGCCCCACTGATTTACTCCCTCTCTTCCCCACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp CAGTCTCGATTCAGGGTGCTTGGTGTTCCCAGATGGTGTTTGAGGGTCCTGACCCCACCTGGATCACGTTaGTGTTGGAGTTCTTGGAAT +
Preference number: 4 (lower is better)
Translates to: QSRFRVLGVPRWCLRVLTPPGSR*CWSSWN
Trigger: ATTCCAAGAACTCCAACAGCAACGTGATCCAGGTGG...GGTCAGGACCCTCAAACACCATCTGGGAACACCAAGCACCCTGAATCGAGACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp TATAGCCATCAGTCCCCTGCTGTGGCTTTGGGGATCAGAACTTCCCAGCTAGGGCCACCTGGATCACGTTaGTGTTGGAGTTCTTGGAAT +
Preference number: 4 (lower is better)
Translates to: YSHQSPAVALGIRTSQLGPPGSR*CWSSWN
Trigger: ATTCCAAGAACTCCAACAGCAACGTGATCCAGGTGG...CCCTAGCTGGGAAGTTCTGATCCCCAAAGCCACAGCAGGGGACTGATGGCTATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp ATCTTGAAAGCATTTGACACAGTGGTATTTGTGGCGTATCTGGCGCTTGTCAGTAGCCCAGCACCCGAATaGCTGCTGAAGGTGGCGCAC +
Preference number: 4 (lower is better)
Translates to: ILKAFDTVVFVAYLALVSSPAPE*LLKVAH
Trigger: GTGCGCCACCTTCAGCAGGCATTCGGGTGCTGGGCT...ACTGACAAGCGCCAGATACGCCACAAATACCACTGTGTCAAATGCTTTCAAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp AAGCATTTGACACAGTGGTATTTGTGGCGTATCTGGCGCTTGTCAGTGTGGGGCCCATGGAGCTCAAGATaGAGCTGGTCACTGAGACAC +
Preference number: 4 (lower is better)
Translates to: KHLTQWYLWRIWRLSVWGPWSSR*SWSLRH
Trigger: GTGTCTCAGTGACCAGCTCCATCTTGAGCTCCATGG...GCCCCACACTGACAAGCGCCAGATACGCCACAAATACCACTGTGTCAAATGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp ATCTTGAAAGCATTTGACACAGTGGTATTTGTGGCGTATCTGGCGCTTGTCAGTGTCCCCCAGCGTGAGTaGCCATCAGGGACTGGGTTG +
Preference number: 4 (lower is better)
Translates to: ILKAFDTVVFVAYLALVSVPQRE*PSGTGL
Trigger: CAACCCAGTCCCTGATGGCCACTCACGCTGGGGGAC...ACTGACAAGCGCCAGATACGCCACAAATACCACTGTGTCAAATGCTTTCAAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp GAGTGGGGAAGAGAGGGAGTAAATCAGTGGGGCTTCCCTTGTCCACAGGTTATTGAGGGAGTAAATCAGTaGGGCTTCCCTTGTCCACAG +
Preference number: 4 (lower is better)
Translates to: EWGREGVNQWGFPCPQVIEGVNQ*GFPCPQ
Trigger: CTGTGGACAAGGGAAGCCCCACTGATTTACTCCCTC...AATAACCTGTGGACAAGGGAAGCCCCACTGATTTACTCCCTCTCTTCCCCACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp GTTCCCAGATGGTGTTTGAGGGTCCTGACCCGACCTCATTCTGCTATAGCCATCATCAGTCCCCTGCTGTaGCTTTGGGGATCAGAACTT +
Preference number: 4 (lower is better)
Translates to: VPRWCLRVLTRPHSAIAIISPLL*LWGSEL
Trigger: AAGTTCTGATCCCCAAAGCCACAGCAGGGGACTGAT...GATGGCTATAGCAGAATGAGGTCGGGTCAGGACCCTCAAACACCATCTGGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp ATCTTGAAAGCATTTGACACAGTGGTATTTGTGGCGTATCTGGCGCTTGTCAGTCCCCACAGGCGTAGCTaGAGAAGTCATGGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: ILKAFDTVVFVAYLALVSPHRRS*RSHGRG
Trigger: ACCCCTGCCATGACTTCTTCAGCTACGCCTGTGGGG...ACTGACAAGCGCCAGATACGCCACAAATACCACTGTGTCAAATGCTTTCAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp GAGTGGGGAAGAGAGGGAGTAAATCAGTGGGGCTTCCCTTGTCCACAGGTTATTAGATCATGTAGTTGTTaGGCAGGCATCTGTCGGTGG +
Preference number: 4 (lower is better)
Translates to: EWGREGVNQWGFPCPQVIRSCSC*AGICRW
Trigger: CCACCGACAGATGCCTGCTCAACAACTACATGATCT...AATAACCTGTGGACAAGGGAAGCCCCACTGATTTACTCCCTCTCTTCCCCACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp GAGTGGGGAAGAGAGGGAGTAAATCAGTGGGGCTTCCCTTGTCCACAGGTTATTGGCCTTTTCCTTGGCTaGTTTTCGGGTTTCCTCATC +
Preference number: 4 (lower is better)
Translates to: EWGREGVNQWGFPCPQVIGLFLG*FSGFLI
Trigger: GATGAGGAAACCCGAAAATCAGCCAAGGAAAAGGCC...AATAACCTGTGGACAAGGGAAGCCCCACTGATTTACTCCCTCTCTTCCCCACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp TATAGCCATCAGTCCCCTGCTGTGGCTTTGGGGATCAGAACTTCCCAGCTAGGGCCCTCCATGAGAAGTTaGAAAACCGCATGGCATTTT +
Preference number: 4 (lower is better)
Translates to: YSHQSPAVALGIRTSQLGPSMRS*KTAWHF
Trigger: AAAATGCCATGCGGTTTTTCAACTTCTCATGGAGGG...CCCTAGCTGGGAAGTTCTGATCCCCAAAGCCACAGCAGGGGACTGATGGCTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp ATCTTGAAAGCATTTGACACAGTGGTATTTGTGGCGTATCTGGCGCTTGTCAGTACTCCTGACCTCAGGTaGTCCGCCCACCTCAACCTC +
Preference number: 4 (lower is better)
Translates to: ILKAFDTVVFVAYLALVSTPDLR*SAHLNL
Trigger: GAGGTTGAGGTGGGCGGATCACCTGAGGTCAGGAGT...ACTGACAAGCGCCAGATACGCCACAAATACCACTGTGTCAAATGCTTTCAAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp ATCTTGAAAGCATTTGACACAGTGGTATTTGTGGCGTATCTGGCGCTTGTCAGTTGGGCGGTGACCACCTaGAGGGTGTCCTGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: ILKAFDTVVFVAYLALVSWAVTT*RVSWKL
Trigger: CAACTTCCAGGACACCCTGCAGGTGGTCACCGCCCA...ACTGACAAGCGCCAGATACGCCACAAATACCACTGTGTCAAATGCTTTCAAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp TTGAGGGTCCTGACCCGACCTCATTCTGCTATAGCCATCAGTCCCCTGCTGTGGCAGGCTTTCCTCAAATaGCTTCTTAATCTCCAGGAT +
Preference number: 4 (lower is better)
Translates to: LRVLTRPHSAIAISPLLWQAFLK*LLNLQD
Trigger: ATCCTGGAGATTAAGAAGGCATTTGAGGAAAGCCTG...CCACAGCAGGGGACTGATGGCTATAGCAGAATGAGGTCGGGTCAGGACCCTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp GAGTGGGGAAGAGAGGGAGTAAATCAGTGGGGCTTCCCTTGTCCACAGGTTATTTCAGCTGCTCGGATCTaGTCCCAAACATCAGAGAGT +
Preference number: 4 (lower is better)
Translates to: EWGREGVNQWGFPCPQVISAARI*SQTSES
Trigger: ACTCTCTGATGTTTGGGAGCAGATCCGAGCAGCTGA...AATAACCTGTGGACAAGGGAAGCCCCACTGATTTACTCCCTCTCTTCCCCACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357071.8
CDS-3UTR CCA 90 bp GTTCCCAGATGGTGTTTGAGGGTCCTGACCCGACCTCATTCTGCTATAGCCATCCATCGGCCTTTTCCTTaGCTGATTTTCGGGTTTCCT +
Preference number: 4 (lower is better)
Translates to: VPRWCLRVLTRPHSAIAIHRPFP*LIFGFP
Trigger: AGGAAACCCGAAAATCAGCCAAGGAAAAGGCCGATG...GATGGCTATAGCAGAATGAGGTCGGGTCAGGACCCTCAAACACCATCTGGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp ATCTTGAAAGCATTTGACACAGTGGTATTTGTGGCGTATCTGGCGCTTGTCAGTAAGCGAGAGGGGCTGTaGGGATCGGTGATGAGGCCT +
Preference number: 4 (lower is better)
Translates to: ILKAFDTVVFVAYLALVSKREGL*GSVMRP
Trigger: AGGCCTCATCACCGATCCCCACAGCCCCTCTCGCTT...ACTGACAAGCGCCAGATACGCCACAAATACCACTGTGTCAAATGCTTTCAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
3UTR CAA 72 bp CTGGCTAAAAGCATCCATCTAGCTGCAAGTACTATCTaGATTCAACCCAGGGGCCGACAATGGACTGCAGCC +
Preference number: 4 (lower is better)
Translates to: LAKSIHLAASTI*IQPRGRQWTAA
Trigger: GGCTGCAGTCCATTGTCGGCCCCTGGGTTGAATCAAGATAGTACTTGCAGCTAGATGGATGCTTTTAGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp TATAGCCATCAGTCCCCTGCTGTGGCTTTGGGGATCAGAACTTCCCAGCTAGGGCAGGCTTTCCTCAAATaGCTTCTTAATCTCCAGGAT +
Preference number: 4 (lower is better)
Translates to: YSHQSPAVALGIRTSQLGQAFLK*LLNLQD
Trigger: ATCCTGGAGATTAAGAAGGCATTTGAGGAAAGCCTG...CCCTAGCTGGGAAGTTCTGATCCCCAAAGCCACAGCAGGGGACTGATGGCTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp ATCTTGAAAGCATTTGACACAGTGGTATTTGTGGCGTATCTGGCGCTTGTCAGTGTCTCAGGGGTGGTCTaGTTCCCACAGATTCAGCCC +
Preference number: 4 (lower is better)
Translates to: ILKAFDTVVFVAYLALVSVSGVV*FPQIQP
Trigger: GGGCTGAATCTGTGGGAACCAGACCACCCCTGAGAC...ACTGACAAGCGCCAGATACGCCACAAATACCACTGTGTCAAATGCTTTCAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357071.8
CDS-3UTR CCA 90 bp AAGCATTTGACACAGTGGTATTTGTGGCGTATCTGGCGCTTGTCAGTGTGGGGCTCGATTCAGGGTGCTTaGTGTTCCCAGATGGTGTTT +
Preference number: 4 (lower is better)
Translates to: KHLTQWYLWRIWRLSVWGSIQGA*CSQMVF
Trigger: AAACACCATCTGGGAACACCAAGCACCCTGAATCGA...GCCCCACACTGACAAGCGCCAGATACGCCACAAATACCACTGTGTCAAATGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp ATCTTGAAAGCATTTGACACAGTGGTATTTGTGGCGTATCTGGCGCTTGTCAGTCGCCCTTGCATGAGGTaGCAGGAGCTGAAATCACAC +
Preference number: 4 (lower is better)
Translates to: ILKAFDTVVFVAYLALVSRPCMR*QELKSH
Trigger: GTGTGATTTCAGCTCCTGTCACCTCATGCAAGGGCG...ACTGACAAGCGCCAGATACGCCACAAATACCACTGTGTCAAATGCTTTCAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp ATCTTGAAAGCATTTGACACAGTGGTATTTGTGGCGTATCTGGCGCTTGTCAGTGTCCTCGGCGAAGGTTaGTTTGACAAACATGGGGCC +
Preference number: 4 (lower is better)
Translates to: ILKAFDTVVFVAYLALVSVLGEG*FDKHGA
Trigger: GGCCCCATGTTTGTCAAAGCAACCTTCGCCGAGGAC...ACTGACAAGCGCCAGATACGCCACAAATACCACTGTGTCAAATGCTTTCAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp TGGATGACGGTGCTCAGAGAGAGGATTTGGGTCCTGCGGGAGGTGACAGCTGTTAAGCATCCATCTAGCTaGAAGTACTATCTTGATTCA +
Preference number: 4 (lower is better)
Translates to: WMTVLRERIWVLREVTAVKHPSS*KYYLDS
Trigger: TGAATCAAGATAGTACTTGCAGCTAGATGGATGCTT...AACAGCTGTCACCTCCCGCAGGACCCAAATCCTCTCTCTGAGCACCGTCATCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp CATCTAGCTGCAAGTACTATCTTGATTCAACCCAGGGGCCGACAATGGACTGCACCCTCCATGAGAAGTTaGAAAACCGCATGGCATTTT +
Preference number: 4 (lower is better)
Translates to: HLAASTILIQPRGRQWTAPSMRS*KTAWHF
Trigger: AAAATGCCATGCGGTTTTTCAACTTCTCATGGAGGG...TGCAGTCCATTGTCGGCCCCTGGGTTGAATCAAGATAGTACTTGCAGCTAGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp GTTCCCAGATGGTGTTTGAGGGTCCTGACCCGACCTCATTCTGCTATAGCCATCAAATGTGTTTTTCCCTaGAGATTTCCAGTGTATTCC +
Preference number: 4 (lower is better)
Translates to: VPRWCLRVLTRPHSAIAIKCVFP*RFPVYS
Trigger: GGAATACACTGGAAATCTTCAGGGAAAAACACATTT...GATGGCTATAGCAGAATGAGGTCGGGTCAGGACCCTCAAACACCATCTGGGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp ATCTTGAAAGCATTTGACACAGTGGTATTTGTGGCGTATCTGGCGCTTGTCAGTGGATCACGTTGCTGTTaGAGTTCTTGGAATCGGCAC +
Preference number: 4 (lower is better)
Translates to: ILKAFDTVVFVAYLALVSGSRCC*SSWNRH
Trigger: GTGCCGATTCCAAGAACTCCAACAGCAACGTGATCC...ACTGACAAGCGCCAGATACGCCACAAATACCACTGTGTCAAATGCTTTCAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR TCA 90 bp ATCTTGAAAGCATTTGACACAGTGGTATTTGTGGCGTATCTGGCGCTTGTCAGTTCTTGGAATCGGCACTaGCATAGACAGAGAAGAAGG +
Preference number: 4 (lower is better)
Translates to: ILKAFDTVVFVAYLALVSSWNRH*HRQRRR
Trigger: CCTTCTTCTCTGTCTATGTCAGTGCCGATTCCAAGA...ACTGACAAGCGCCAGATACGCCACAAATACCACTGTGTCAAATGCTTTCAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp ATCTTGAAAGCATTTGACACAGTGGTATTTGTGGCGTATCTGGCGCTTGTCAGTGAGGTGCTTGATGATTaGTTGGTTGTGTTCCCAGAG +
Preference number: 4 (lower is better)
Translates to: ILKAFDTVVFVAYLALVSEVLDD*LVVFPE
Trigger: CTCTGGGAACACAACCAAGCAATCATCAAGCACCTC...ACTGACAAGCGCCAGATACGCCACAAATACCACTGTGTCAAATGCTTTCAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp ATCTTGAAAGCATTTGACACAGTGGTATTTGTGGCGTATCTGGCGCTTGTCAGTATGAGAGTGGAGATCTaGTCAAGGTATTCCTTGTCA +
Preference number: 4 (lower is better)
Translates to: ILKAFDTVVFVAYLALVSMRVEI*SRYSLS
Trigger: TGACAAGGAATACCTTGAGCAGATCTCCACTCTCAT...ACTGACAAGCGCCAGATACGCCACAAATACCACTGTGTCAAATGCTTTCAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR GCA 90 bp ATCTTGAAAGCATTTGACACAGTGGTATTTGTGGCGTATCTGGCGCTTGTCAGTGTAGAGGTCTGGAACTaGAGTGTAGTCATTAAACAC +
Preference number: 4 (lower is better)
Translates to: ILKAFDTVVFVAYLALVSVEVWN*SVVIKH
Trigger: GTGTTTAATGACTACACTGCAGTTCCAGACCTCTAC...ACTGACAAGCGCCAGATACGCCACAAATACCACTGTGTCAAATGCTTTCAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CCA 90 bp ATCTTGAAAGCATTTGACACAGTGGTATTTGTGGCGTATCTGGCGCTTGTCAGTAAGCATTTGACACAGTaGTATTTGTGGCGTATCTGG +
Preference number: 4 (lower is better)
Translates to: ILKAFDTVVFVAYLALVSKHLTQ*YLWRIW
Trigger: CCAGATACGCCACAAATACCACTGTGTCAAATGCTT...ACTGACAAGCGCCAGATACGCCACAAATACCACTGTGTCAAATGCTTTCAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS GCA 90 bp GCTCCGGGTTCCCTGCTCCCAGCCCAGCTGCTCGGACGGCTCGGCTaGCTGGCCCAGGCGGCGCGCTCAGCTCCAGCGGGCGAGCTCGCG +
Preference number: 5 (lower is better)
Translates to: APGSLLPAQLLGRLG*LAQAARSAPAGELA
Trigger: CGCGAGCTCGCCCGCTGGAGCTGAGCGCGCCGCCTGGGCCAGGCAGCCGAGCCGTCCGAGCAGCTGGGCTGGGAGCAGGGAACCCGGAGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649812.1
CDS CCA 90 bp CGGGTTCCCTGCTCCCAGCCCAGCTGCTCGGACGGCTCGGCTGCCTaGCCCAGGCGGCGCGCTCAGCTCCAGCGGGCGAGCTCGCGGCTT +
Preference number: 5 (lower is better)
Translates to: RVPCSQPSCSDGSAA*PRRRAQLQRASSRL
Trigger: AAGCCGCGAGCTCGCCCGCTGGAGCTGAGCGCGCCGCCTGGGCCAGGCAGCCGAGCCGTCCGAGCAGCTGGGCTGGGAGCAGGGAACCCG
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649812.1
CDS CCA 90 bp ACATCTGCAAGGCCAAATGCAGCACGGACTCCCTCAGCGCCTCCATaGCTCTCGCGCCCGAATGGGGAAGCGGCCCCGACCCTGGCGCCG +
Preference number: 5 (lower is better)
Translates to: TSARPNAARTPSAPP*LSRPNGEAAPTLAP
Trigger: CGGCGCCAGGGTCGGGGCCGCTTCCCCATTCGGGCGCGAGAGCCATGGAGGCGCTGAGGGAGTCCGTGCTGCATTTGGCCTTGCAGATGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264205.10
CDS CCA 90 bp CGTCGCCCTCGGAGAGCGAGTCCACCAGGTCCTCCTCGTCCAGCGTaGCCCGCTTGTACGTCGACATCTCAGTGTCCCGGGACGCTCAGG +
Preference number: 5 (lower is better)
Translates to: RRPRRASPPGPPRPA*PACTSTSQCPGTLR
Trigger: CCTGAGCGTCCCGGGACACTGAGATGTCGACGTACAAGCGGGCCACGCTGGACGAGGAGGACCTGGTGGACTCGCTCTCCGAGGGCGACG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463334.2
CDS-3UTR CAA 90 bp GGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGGGGACTGGGTTGGCCTaGATCCAGCCCCCACAGGCG +
Preference number: 5 (lower is better)
Translates to: GAGADTTGPPPSTRKAGGGTGLA*IQPPQA
Trigger: CGCCTGTGGGGGCTGGATCAAGGCCAACCCAGTCCC...CCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACC
68% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CAA 90 bp CCTGCACCAGCTTGGAGGCAGATCCCAAGGTGGCAGGGGTGTCCCTGTGCCGTCCCCTGGGGAAGAGGGTaGGCCGGACAGACCCTGGTG +
Preference number: 5 (lower is better)
Translates to: PAPAWRQIPRWQGCPCAVPWGRG*AGQTLV
Trigger: CACCAGGGTCTGTCCGGCCAACCCTCTTCCCCAGGG...GACGGCACAGGGACACCCCTGCCACCTTGGGATCTGCCTCCAAGCTGGTGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp GCCAGAGCTCCTGGGCTCCCGTGGAGGTTAGCCCTGCAGGCACCGGGGAAATGGTCCAGCGTGGCCCGCTaGTACGTCGACATCCCCAGC +
Preference number: 5 (lower is better)
Translates to: ARAPGLPWRLALQAPGKWSSVAR*YVDIPS
Trigger: GCTGGGGATGTCGACGTACAAGCGGGCCACGCTGGA...CCATTTCCCCGGTGCCTGCAGGGCTAACCTCCACGGGAGCCCAGGAGCTCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374893.11
CDS-3UTR CAA 90 bp ATCCCAAGGTGGCAGGGGTGTCCCTGTGCCGTCTGCTTCCTCTCGGGCAGGAGGGCAGGGGCTGTCTCCTaGGGGTGGAGACTGGCGGCT +
Preference number: 5 (lower is better)
Translates to: IPRWQGCPCAVCFLSGRRAGAVS*GWRLAA
Trigger: AGCCGCCAGTCTCCACCCCAAGGAGACAGCCCCTGC...CCTCCTGCCCGAGAGGAAGCAGACGGCACAGGGACACCCCTGCCACCTTGGGAT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS GCA 90 bp GCTTGTACGTCGACATCTCAGTGTCCCGGGACGCTCAGGTCCAGCTaGATCCAGGCACCTCGAAATCGCCGCCACCCGCGAGCCCGACCC +
Preference number: 5 (lower is better)
Translates to: ACTSTSQCPGTLRSS*IQAPRNRRHPRARP
Trigger: GGGTCGGGCTCGCGGGTGGCGGCGATTTCGAGGTGCCTGGATGCAGCTGGACCTGAGCGTCCCGGGACACTGAGATGTCGACGTACAAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463334.2
CDS-3UTR CAA 90 bp CCGGCAGACCTGAGCCATGAGTGTGGTCTCCATTCCCTCGGGCTGCACCCCCAGTTCACCTGCAGGCCGTaGGGGTATGCGTCGCCCTCG +
Preference number: 5 (lower is better)
Translates to: PADLSHECGLHSLGLHPQFTCRP*GYASPS
Trigger: CGAGGGCGACGCATACCCCAACGGCCTGCAGGTGAA...CTGGGGGTGCAGCCCGAGGGAATGGAGACCACACTCATGGCTCAGGTCTGCCGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CAA 90 bp GGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGTTCACCTGCAGGCCGTaGGGGTATGCGTCGCCCTCG +
Preference number: 5 (lower is better)
Translates to: GAGADTTGPPPSTRKAGGFTCRP*GYASPS
Trigger: CGAGGGCGACGCATACCCCAACGGCCTGCAGGTGAA...CCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CAA 90 bp CCCGAATGCCTGCTGAAGGTGGCGCACACGTGTGCCTGGGATGTCCGGCTCTTCGGGACTGGGTTGGCCTaGATCCAGCCCCCACAGGCG +
Preference number: 5 (lower is better)
Translates to: PECLLKVAHTCAWDVRLFGTGLA*IQPPQA
Trigger: CGCCTGTGGGGGCTGGATCAAGGCCAACCCAGTCCC...GAAGAGCCGGACATCCCAGGCACACGTGTGCGCCACCTTCAGCAGGCATTCGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp GGGGATCAGACTGCGGGTCACGTTGAGAGCCAACACCATGGGCTCGGTTCCGGCGGGACTGGGTTGGCCTaGATCCAGCCCCCACAGGCG +
Preference number: 5 (lower is better)
Translates to: GDQTAGHVESQHHGLGSGGTGLA*IQPPQA
Trigger: CGCCTGTGGGGGCTGGATCAAGGCCAACCCAGTCCC...GCCGGAACCGAGCCCATGGTGTTGGCTCTCAACGTGACCCGCAGTCTGATCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp CCCATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGGGACTGGGTTGGCCTaGATCCAGCCCCCACAGGCG +
Preference number: 5 (lower is better)
Translates to: PMVLVLTLQDHHPPRGRQGTGLA*IQPPQA
Trigger: CGCCTGTGGGGGCTGGATCAAGGCCAACCCAGTCCC...CTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CAA 90 bp GGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGTGGCGTATCTGGCGCTaGTCAGTGTGGGGCCCAGGC +
Preference number: 5 (lower is better)
Translates to: GAGADTTGPPPSTRKAGGWRIWR*SVWGPG
Trigger: GCCTGGGCCCCACACTGACAAGCGCCAGATACGCCA...CCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp GGGGATCAGACTGCGGGTCACGTTGAGAGCCAACACCATGGGCTCGGTTCCGGCCCCTGGGGAAGAGGGTaGGCCGGACAGACCCTGGTG +
Preference number: 5 (lower is better)
Translates to: GDQTAGHVESQHHGLGSGPWGRG*AGQTLV
Trigger: CACCAGGGTCTGTCCGGCCAACCCTCTTCCCCAGGG...GCCGGAACCGAGCCCATGGTGTTGGCTCTCAACGTGACCCGCAGTCTGATCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp GGGGATCAGACTGCGGGTCACGTTGAGAGCCAACACCATGGGCTCGGTTCCGGCGCAGGGGCTGTCTCCTaGGGGTGGAGACTGGCGGCT +
Preference number: 5 (lower is better)
Translates to: GDQTAGHVESQHHGLGSGAGAVS*GWRLAA
Trigger: AGCCGCCAGTCTCCACCCCAAGGAGACAGCCCCTGC...GCCGGAACCGAGCCCATGGTGTTGGCTCTCAACGTGACCCGCAGTCTGATCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS GCA 90 bp GGGATGGTGATGTTGGCCAGTGCCGTCTCAAAGTCCAAGATCTGCTaGATCTGGGGCCGGATGGCCTCCTCGTCCCCGCCGCCCAGCAGC +
Preference number: 5 (lower is better)
Translates to: GMVMLASAVSKSKIC*IWGRMASSSPPPSS
Trigger: GCTGCTGGGCGGCGGGGACGAGGAGGCCATCCGGCCCCAGATGCAGCAGATCTTGGACTTTGAGACGGCACTGGCCAACATCACCATCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264205.10
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
ENST00000436918.6
ENST00000526194.5
ENST00000528294.1
ENST00000649812.1
CDS CCA 90 bp CGTCGCCCTCGGAGAGCGAGTCCACCAGGTCCTCCTCGTCCAGCGTaGCCCGCTTGTACGTCGACATCTGCAAGGCCAAATGCAGCACGG +
Preference number: 5 (lower is better)
Translates to: RRPRRASPPGPPRPA*PACTSTSARPNAAR
Trigger: CCGTGCTGCATTTGGCCTTGCAGATGTCGACGTACAAGCGGGCCACGCTGGACGAGGAGGACCTGGTGGACTCGCTCTCCGAGGGCGACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264205.10
CDS CCA 90 bp CGTCGCCCTCGGAGAGCGAGTCCACCAGGTCCTCCTCGTCCAGCGTaGCCCGCTTGTACGTCGACATCTGGGTCCTGGACTCTTGGTCCT +
Preference number: 5 (lower is better)
Translates to: RRPRRASPPGPPRPA*PACTSTSGSWTLGP
Trigger: AGGACCAAGAGTCCAGGACCCAGATGTCGACGTACAAGCGGGCCACGCTGGACGAGGAGGACCTGGTGGACTCGCTCTCCGAGGGCGACG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527991.2
CDS-3UTR CAA 90 bp CAGCTAGGGCTCCCACTGTTGGACTCAGGGGACGGAGGCAGGCTAGCTGAAGGGCTAGGGCTCCCACTGTaGGACTCAGGGGACGGAGGC +
Preference number: 5 (lower is better)
Translates to: QLGLPLLDSGDGGRLAEGLGLPL*DSGDGG
Trigger: GCCTCCGTCCCCTGAGTCCAACAGTGGGAGCCCTAG...CCCTTCAGCTAGCCTGCCTCCGTCCCCTGAGTCCAACAGTGGGAGCCCTAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS TCA 90 bp CGCGAGCCCGACCCAGCCCGGCTGCCCTGGGTCTCCAAGCCAAGCTaGGTCCAGGGACTTCAGAACAACCCAAAACAGACCGCAGCAACC +
Preference number: 5 (lower is better)
Translates to: REPDPARLPWVSKPS*VQGLQNNPKQTAAT
Trigger: GGTTGCTGCGGTCTGTTTTGGGTTGTTCTGAAGTCCCTGGACTCAGCTTGGCTTGGAGACCCAGGGCAGCCGGGCTGGGTCGGGCTCGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463334.2
CDS GCA 90 bp TCGTCCAGCGTGGCCCGCTTGTACGTCGACATCTGCAAGGCCAAATaGAGCACGGACTCCCTCAGCGCCTCCATGGCTCTCGCGCCCGAA +
Preference number: 5 (lower is better)
Translates to: SSSVARLYVDICKAK*STDSLSASMALAPE
Trigger: TTCGGGCGCGAGAGCCATGGAGGCGCTGAGGGAGTCCGTGCTGCATTTGGCCTTGCAGATGTCGACGTACAAGCGGGCCACGCTGGACGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264205.10
CDS GCA 90 bp TGTGGGATGGTGATGTTGGCCAGTGCCGTCTCAAAGTCCAAGATCTaGTGCATCTGGGGCCGGATGGCCTCCTCGTCCCCGCCGCCCAGC +
Preference number: 5 (lower is better)
Translates to: CGMVMLASAVSKSKI*CIWGRMASSSPPPS
Trigger: GCTGGGCGGCGGGGACGAGGAGGCCATCCGGCCCCAGATGCAGCAGATCTTGGACTTTGAGACGGCACTGGCCAACATCACCATCCCACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264205.10
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
ENST00000436918.6
ENST00000526194.5
ENST00000528294.1
ENST00000649812.1
CDS-3UTR CAA 90 bp CACGTGTGCCTGGGATGTCCGGCTCTTCACAGGGGATCAGACTGCGGGTCACGTTTCACCTGCAGGCCGTaGGGGTATGCGTCGCCCTCG +
Preference number: 5 (lower is better)
Translates to: HVCLGCPALHRGSDCGSRFTCRP*GYASPS
Trigger: CGAGGGCGACGCATACCCCAACGGCCTGCAGGTGAA...ACGTGACCCGCAGTCTGATCCCCTGTGAAGAGCCGGACATCCCAGGCACACGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp CTAGGGCTCCCACTGTTGGACTCAGGGGACGGAGGCAGGCTAGCTGAAGGGGCACCATCAGGGACTGGGTaGGCCTTGATCCAGCCCCCA +
Preference number: 5 (lower is better)
Translates to: LGLPLLDSGDGGRLAEGAPSGTG*ALIQPP
Trigger: TGGGGGCTGGATCAAGGCCAACCCAGTCCCTGATGG...TGCCCCTTCAGCTAGCCTGCCTCCGTCCCCTGAGTCCAACAGTGGGAGCCCTAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp CCCATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGCCATCAGGGACTGGGTaGGCCTTGATCCAGCCCCCA +
Preference number: 5 (lower is better)
Translates to: PMVLVLTLQDHHPPRGRQPSGTG*ALIQPP
Trigger: TGGGGGCTGGATCAAGGCCAACCCAGTCCCTGATGG...CTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CAA 90 bp GGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGTCGGGGTCCTGGAAGTTGTCCTaGGCCCAGGGACCTGTGATG +
Preference number: 5 (lower is better)
Translates to: GADTTGPPPSTRKAGGSGSWKLS*AQGPVM
Trigger: CATCACAGGTCCCTGGGCCAAGGACAACTTCCAGGA...CCCCGACCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CAA 90 bp CCCGAATGCCTGCTGAAGGTGGCGCACACGTGTGCCTGGGATGTCCGGCTCTTCTTCCCCTCCTCCGTCTaGGCTCTCTCCGCTTCGTCC +
Preference number: 5 (lower is better)
Translates to: PECLLKVAHTCAWDVRLFFPSSV*ALSASS
Trigger: GGACGAAGCGGAGAGAGCCAAGACGGAGGAGGGGAA...GAAGAGCCGGACATCCCAGGCACACGTGTGCGCCACCTTCAGCAGGCATTCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp GGGGATCAGACTGCGGGTCACGTTGAGAGCCAACACCATGGGCTCGGTTCCGGCTTCCCCTCCTCCGTCTaGGCTCTCTCCGCTTCGTCC +
Preference number: 5 (lower is better)
Translates to: GDQTAGHVESQHHGLGSGFPSSV*ALSASS
Trigger: GGACGAAGCGGAGAGAGCCAAGACGGAGGAGGGGAA...GCCGGAACCGAGCCCATGGTGTTGGCTCTCAACGTGACCCGCAGTCTGATCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp GGGGTGTCCCTGTGCCGTCTGCTTCCTCTCGGGCAGGAGGATTCCAGCTTCCCGAGACTGCGGGTCACGTaGAGAGCCAACACCATGGGC +
Preference number: 5 (lower is better)
Translates to: GVSLCRLLPLGQEDSSFPRLRVT*RANTMG
Trigger: GCCCATGGTGTTGGCTCTCAACGTGACCCGCAGTCT...CGGGAAGCTGGAATCCTCCTGCCCGAGAGGAAGCAGACGGCACAGGGACACCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp CACGTGTGCCTGGGATGTCCGGCTCTTCACAGGGGATCAGACTGCGGGTCACGTTGGCGTATCTGGCGCTaGTCAGTGTGGGGCCCAGGC +
Preference number: 5 (lower is better)
Translates to: HVCLGCPALHRGSDCGSRWRIWR*SVWGPG
Trigger: GCCTGGGCCCCACACTGACAAGCGCCAGATACGCCA...ACGTGACCCGCAGTCTGATCCCCTGTGAAGAGCCGGACATCCCAGGCACACGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS GCA 90 bp ACCAGGTCCTCCTCGTCCAGCGTGGCCCGCTTGTACGTCGACATCTaGAAGGCCAAATGCAGCACGGACTCCCTCAGCGCCTCCATGGCT +
Preference number: 5 (lower is better)
Translates to: TRSSSSSVARLYVDI*KAKCSTDSLSASMA
Trigger: AGCCATGGAGGCGCTGAGGGAGTCCGTGCTGCATTTGGCCTTGCAGATGTCGACGTACAAGCGGGCCACGCTGGACGAGGAGGACCTGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264205.10
CDS CCA 90 bp TTGGAATTGGAGAGGGAGCCGATGACCCGGAAGCGAGAGGGGCTGTaGGGATCGGTGATGAGGCCTTCGTGGGAGCTCTCAGGTGTGCGG +
Preference number: 5 (lower is better)
Translates to: LELEREPMTRKREGL*GSVMRPSWELSGVR
Trigger: CCGCACACCTGAGAGCTCCCACGAAGGCCTCATCACCGATCCCCACAGCCCCTCTCGCTTCCGGGTCATCGGCTCCCTCTCCAATTCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000264205.10
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
ENST00000436918.6
ENST00000531334.1
ENST00000649812.1
CDS-3UTR CAA 90 bp GTCTCCTCTGCAGAGCTACCAGGACTGCTGCGTGCTGGGACCAGGACCTCCATCCCATCAGGGACTGGGTaGGCCTTGATCCAGCCCCCA +
Preference number: 5 (lower is better)
Translates to: VSSAELPGLLRAGTRTSIPSGTG*ALIQPP
Trigger: TGGGGGCTGGATCAAGGCCAACCCAGTCCCTGATGG...GATGGAGGTCCTGGTCCCAGCACGCAGCAGTCCTGGTAGCTCTGCAGAGGAGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp GCCAGAGCTCCTGGGCTCCCGTGGAGGTTAGCCCTGCAGGCACCGGGGAAATGGAGAAAAGGCAACCAGTaGATGGCGGGTGCCAAGGTC +
Preference number: 5 (lower is better)
Translates to: ARAPGLPWRLALQAPGKWRKGNQ*MAGAKV
Trigger: GACCTTGGCACCCGCCATCAACTGGTTGCCTTTTCT...CCATTTCCCCGGTGCCTGCAGGGCTAACCTCCACGGGAGCCCAGGAGCTCTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp GGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGTCGGGGAGAAAAGGCAACCAGTaGATGGCGGGTGCCAAGGTC +
Preference number: 5 (lower is better)
Translates to: GADTTGPPPSTRKAGGSGRKGNQ*MAGAKV
Trigger: GACCTTGGCACCCGCCATCAACTGGTTGCCTTTTCT...CCCCGACCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CAA 90 bp CCGGCAGACCTGAGCCATGAGTGTGGTCTCCATTCCCTCGGGCTGCACCCCCAGTCGGTGGCTATGCTCTaGCTGTCCTCGGCGAAGGTT +
Preference number: 5 (lower is better)
Translates to: PADLSHECGLHSLGLHPQSVAML*LSSAKV
Trigger: AACCTTCGCCGAGGACAGCAAGAGCATAGCCACCGA...CTGGGGGTGCAGCCCGAGGGAATGGAGACCACACTCATGGCTCAGGTCTGCCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CAA 90 bp GGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGAAGAAGAGCTGGTTATaGGTGAGGCCCAGGGTGGGG +
Preference number: 5 (lower is better)
Translates to: GAGADTTGPPPSTRKAGGKKSWL*VRPRVG
Trigger: CCCCACCCTGGGCCTCACCAATAACCAGCTCTTCTT...CCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CAA 90 bp GTCTCCTCTGCAGAGCTACCAGGACTGCTGCGTGCTGGGACCAGGACCTCCATCTTCCCCTCCTCCGTCTaGGCTCTCTCCGCTTCGTCC +
Preference number: 5 (lower is better)
Translates to: VSSAELPGLLRAGTRTSIFPSSV*ALSASS
Trigger: GGACGAAGCGGAGAGAGCCAAGACGGAGGAGGGGAA...GATGGAGGTCCTGGTCCCAGCACGCAGCAGTCCTGGTAGCTCTGCAGAGGAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp CAGCTAGGGCTCCCACTGTTGGACTCAGGGGACGGAGGCAGGCTAGCTGAAGGGCTGGTCTCCACGCCCTaGCATGAGGTGACAGGAGCT +
Preference number: 5 (lower is better)
Translates to: QLGLPLLDSGDGGRLAEGLVSTP*HEVTGA
Trigger: AGCTCCTGTCACCTCATGCAAGGGCGTGGAGACCAG...CCCTTCAGCTAGCCTGCCTCCGTCCCCTGAGTCCAACAGTGGGAGCCCTAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp CTAGGGCTCCCACTGTTGGACTCAGGGGACGGAGGCAGGCTAGCTGAAGGGGCACTGGTCTCCACGCCCTaGCATGAGGTGACAGGAGCT +
Preference number: 5 (lower is better)
Translates to: LGLPLLDSGDGGRLAEGALVSTP*HEVTGA
Trigger: AGCTCCTGTCACCTCATGCAAGGGCGTGGAGACCAG...TGCCCCTTCAGCTAGCCTGCCTCCGTCCCCTGAGTCCAACAGTGGGAGCCCTAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp CTGCACCAGCTTGGAGGCAGATCCCAAGGTGGCAGGGGTGTCCCTGTGCCGTCTCTGGTCTCCACGCCCTaGCATGAGGTGACAGGAGCT +
Preference number: 5 (lower is better)
Translates to: LHQLGGRSQGGRGVPVPSLVSTP*HEVTGA
Trigger: AGCTCCTGTCACCTCATGCAAGGGCGTGGAGACCAG...AGACGGCACAGGGACACCCCTGCCACCTTGGGATCTGCCTCCAAGCTGGTGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp GGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGTCCCCTGCTGTGGCTTaGGGGATCAGAACTTCCCAG +
Preference number: 5 (lower is better)
Translates to: GAGADTTGPPPSTRKAGGSPAVA*GIRTSQ
Trigger: CTGGGAAGTTCTGATCCCCAAAGCCACAGCAGGGGA...CCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp GTATTTGTGGCGTATCTGGCGCTTGTCAGTGTGGGGCCCAGGCCTGATGAGCCACCCTGGGGAAGAGGGTaGGCCGGACAGACCCTGGTG +
Preference number: 5 (lower is better)
Translates to: VFVAYLALVSVGPRPDEPPWGRG*AGQTLV
Trigger: CACCAGGGTCTGTCCGGCCAACCCTCTTCCCCAGGG...TGGCTCATCAGGCCTGGGCCCCACACTGACAAGCGCCAGATACGCCACAAATAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp CCGGCAGACCTGAGCCATGAGTGTGGTCTCCATTCCCTCGGGCTGCACCCCCAGTCCAGCGTGGCCCGCTaGTACGTCGACATCATAGCT +
Preference number: 5 (lower is better)
Translates to: PADLSHECGLHSLGLHPQSSVAR*YVDIIA
Trigger: AGCTATGATGTCGACGTACAAGCGGGCCACGCTGGA...CTGGGGGTGCAGCCCGAGGGAATGGAGACCACACTCATGGCTCAGGTCTGCCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CAA 90 bp CCCGAATGCCTGCTGAAGGTGGCGCACACGTGTGCCTGGGATGTCCGGCTCTTCTCCTGGAAGTTGTCCTaGGCCCAGGGACCTGTGATG +
Preference number: 5 (lower is better)
Translates to: PECLLKVAHTCAWDVRLFSWKLS*AQGPVM
Trigger: CATCACAGGTCCCTGGGCCAAGGACAACTTCCAGGA...GAAGAGCCGGACATCCCAGGCACACGTGTGCGCCACCTTCAGCAGGCATTCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp CCGGCAGACCTGAGCCATGAGTGTGGTCTCCATTCCCTCGGGCTGCACCCCCAGGGTCAAGGAAGGAGCTaGTTTTCCGCACCAGGTTCC +
Preference number: 5 (lower is better)
Translates to: PADLSHECGLHSLGLHPQGQGRS*FSAPGS
Trigger: GGAACCTGGTGCGGAAAACAAGCTCCTTCCTTGACC...CTGGGGGTGCAGCCCGAGGGAATGGAGACCACACTCATGGCTCAGGTCTGCCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CAA 90 bp TATAGCCATCAGTCCCCTGCTGTGGCTTTGGGGATCAGAACTTCCCAGCTAGGGCGGGCCCCGCTTCCCTaGGAGGAAGGGGTTCCGCTG +
Preference number: 5 (lower is better)
Translates to: YSHQSPAVALGIRTSQLGRAPLP*EEGVPL
Trigger: CAGCGGAACCCCTTCCTCCAAGGGAAGCGGGGCCCG...CCCTAGCTGGGAAGTTCTGATCCCCAAAGCCACAGCAGGGGACTGATGGCTATA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000357071.8
CDS-3UTR CAA 90 bp ATCCCAAGGTGGCAGGGGTGTCCCTGTGCCGTCTGCTTCCTCTCGGGCAGGAGGAGGCAGCTGTCTGATTaGGAGACTTGCTCTGTGGCC +
Preference number: 5 (lower is better)
Translates to: IPRWQGCPCAVCFLSGRRRQLSD*ETCSVA
Trigger: GGCCACAGAGCAAGTCTCCAAATCAGACAGCTGCCT...CCTCCTGCCCGAGAGGAAGCAGACGGCACAGGGACACCCCTGCCACCTTGGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp GTATTTGTGGCGTATCTGGCGCTTGTCAGTGTGGGGCCCAGGCCTGATGAGCCACTAGGGCTCCCACTGTaGGACTCAGGGGACGGAGGC +
Preference number: 5 (lower is better)
Translates to: VFVAYLALVSVGPRPDEPLGLPL*DSGDGG
Trigger: GCCTCCGTCCCCTGAGTCCAACAGTGGGAGCCCTAG...TGGCTCATCAGGCCTGGGCCCCACACTGACAAGCGCCAGATACGCCACAAATAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp GGGGATCAGACTGCGGGTCACGTTGAGAGCCAACACCATGGGCTCGGTTCCGGCTCCCCTGCTGTGGCTTaGGGGATCAGAACTTCCCAG +
Preference number: 5 (lower is better)
Translates to: GDQTAGHVESQHHGLGSGSPAVA*GIRTSQ
Trigger: CTGGGAAGTTCTGATCCCCAAAGCCACAGCAGGGGA...GCCGGAACCGAGCCCATGGTGTTGGCTCTCAACGTGACCCGCAGTCTGATCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp CTAGGGCTCCCACTGTTGGACTCAGGGGACGGAGGCAGGCTAGCTGAAGGGGCAGTTCCCAGATGGTGTTaGAGGGTCCTGACCCGACCT +
Preference number: 5 (lower is better)
Translates to: LGLPLLDSGDGGRLAEGAVPRWC*RVLTRP
Trigger: AGGTCGGGTCAGGACCCTCAAACACCATCTGGGAAC...TGCCCCTTCAGCTAGCCTGCCTCCGTCCCCTGAGTCCAACAGTGGGAGCCCTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp GCTCCTGGGCTCCCGTGGAGGTTAGCCCTGCAGGCACCGGGGAAATGGGGCTATACTGAGAGGGGACACTaGTGGCCAGCAGTGTATCTC +
Preference number: 5 (lower is better)
Translates to: APGLPWRLALQAPGKWGYTERGH*WPAVYL
Trigger: GAGATACACTGCTGGCCACAAGTGTCCCCTCTCAGT...ATAGCCCCATTTCCCCGGTGCCTGCAGGGCTAACCTCCACGGGAGCCCAGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS GCA 90 bp CAGGCACACAGAGGGGGATCTTGTCTGGTACTGGATGCCCAGTGCTaGCAAGCAGGCCACCAGTCCTGCCGCCAGAAGTACCACCAACAC +
Preference number: 5 (lower is better)
Translates to: QAHRGGSCLVLDAQC*QAGHQSCRQKYHQH
Trigger: GTGTTGGTGGTACTTCTGGCGGCAGGACTGGTGGCCTGCTTGGCAGCACTGGGCATCCAGTACCAGACAAGATCCCCCTCTGTGTGCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000264205.10
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
ENST00000436918.6
ENST00000463334.2
ENST00000473505.5
ENST00000481130.6
ENST00000526194.5
ENST00000527991.2
ENST00000649812.1
CDS-3UTR CAA 90 bp CAGCTAGGGCTCCCACTGTTGGACTCAGGGGACGGAGGCAGGCTAGCTGAAGGGCGCACGGTAGTATACTaGCGCCTTTCTCTCTGCCTC +
Preference number: 5 (lower is better)
Translates to: QLGLPLLDSGDGGRLAEGRTVVY*RLSLCL
Trigger: GAGGCAGAGAGAAAGGCGCAAGTATACTACCGTGCG...CCCTTCAGCTAGCCTGCCTCCGTCCCCTGAGTCCAACAGTGGGAGCCCTAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp CCCATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGCGCACGGTAGTATACTaGCGCCTTTCTCTCTGCCTC +
Preference number: 5 (lower is better)
Translates to: PMVLVLTLQDHHPPRGRQRTVVY*RLSLCL
Trigger: GAGGCAGAGAGAAAGGCGCAAGTATACTACCGTGCG...CTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CAA 90 bp CATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGATCCTGGAAGTTGTCCTaGGCCCAGGGACCTGTGATG +
Preference number: 5 (lower is better)
Translates to: HGAGADTTGPPPSTRKAGSWKLS*AQGPVM
Trigger: CATCACAGGTCCCTGGGCCAAGGACAACTTCCAGGA...TCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CAA 90 bp GCCAGAGCTCCTGGGCTCCCGTGGAGGTTAGCCCTGCAGGCACCGGGGAAATGGTGGATCACGTTGCTGTaGGAGTTCTTGGAATCGGCA +
Preference number: 5 (lower is better)
Translates to: ARAPGLPWRLALQAPGKWWITLL*EFLESA
Trigger: TGCCGATTCCAAGAACTCCAACAGCAACGTGATCCA...CCATTTCCCCGGTGCCTGCAGGGCTAACCTCCACGGGAGCCCAGGAGCTCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp GCCAGAGCTCCTGGGCTCCCGTGGAGGTTAGCCCTGCAGGCACCGGGGAAATGGTCCACCTGGATCACGTaGCTGTTGGAGTTCTTGGAA +
Preference number: 5 (lower is better)
Translates to: ARAPGLPWRLALQAPGKWSTWIT*LLEFLE
Trigger: TTCCAAGAACTCCAACAGCAACGTGATCCAGGTGGA...CCATTTCCCCGGTGCCTGCAGGGCTAACCTCCACGGGAGCCCAGGAGCTCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp GGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGTCGGGGTCCACCTGGATCACGTaGCTGTTGGAGTTCTTGGAA +
Preference number: 5 (lower is better)
Translates to: GADTTGPPPSTRKAGGSGSTWIT*LLEFLE
Trigger: TTCCAAGAACTCCAACAGCAACGTGATCCAGGTGGA...CCCCGACCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CAA 90 bp CAGCTAGGGCTCCCACTGTTGGACTCAGGGGACGGAGGCAGGCTAGCTGAAGGGTGTGGGATGGTGATGTaGGCCAGTGCCGTCTCAAAG +
Preference number: 5 (lower is better)
Translates to: QLGLPLLDSGDGGRLAEGCGMVM*ASAVSK
Trigger: CTTTGAGACGGCACTGGCCAACATCACCATCCCACA...CCCTTCAGCTAGCCTGCCTCCGTCCCCTGAGTCCAACAGTGGGAGCCCTAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp CCCATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGTGTGGGATGGTGATGTaGGCCAGTGCCGTCTCAAAG +
Preference number: 5 (lower is better)
Translates to: PMVLVLTLQDHHPPRGRQCGMVM*ASAVSK
Trigger: CTTTGAGACGGCACTGGCCAACATCACCATCCCACA...CTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CAA 90 bp GTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGTAGAAAAGGCAACCAGTaGATGGCGGGTGCCAAGGTC +
Preference number: 5 (lower is better)
Translates to: VLVLTLQDHHPPRGRQEGRKGNQ*MAGAKV
Trigger: GACCTTGGCACCCGCCATCAACTGGTTGCCTTTTCT...ACCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CAA 90 bp GGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGGGAAGACAGGTCTTCTaGGTCCCGTACATGACTTCC +
Preference number: 5 (lower is better)
Translates to: GAGADTTGPPPSTRKAGGGRQVF*VPYMTS
Trigger: GGAAGTCATGTACGGGACCAAGAAGACCTGTCTTCC...CCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CAA 90 bp GCGCACACGTGTGCCTGGGATGTCCGGCTCTTCACAGGGGATCAGACTGCGGGTTCGGCGAAGGTTGCTTaGACAAACATGGGGCCCAAC +
Preference number: 5 (lower is better)
Translates to: AHTCAWDVRLFTGDQTAGSAKVA*TNMGPN
Trigger: GTTGGGCCCCATGTTTGTCAAAGCAACCTTCGCCGA...ACCCGCAGTCTGATCCCCTGTGAAGAGCCGGACATCCCAGGCACACGTGTGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp GTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGTTCGGCGAAGGTTGCTTaGACAAACATGGGGCCCAAC +
Preference number: 5 (lower is better)
Translates to: VLVLTLQDHHPPRGRQEGSAKVA*TNMGPN
Trigger: GTTGGGCCCCATGTTTGTCAAAGCAACCTTCGCCGA...ACCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CAA 90 bp CATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGATCGGTGGCTATGCTCTaGCTGTCCTCGGCGAAGGTT +
Preference number: 5 (lower is better)
Translates to: HGAGADTTGPPPSTRKAGSVAML*LSSAKV
Trigger: AACCTTCGCCGAGGACAGCAAGAGCATAGCCACCGA...TCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CAA 90 bp AGGCAGATCCCAAGGTGGCAGGGGTGTCCCTGTGCCGTCTGCTTCCTCTCGGGCGCATCGGCCTTTTCCTaGGCTGATTTTCGGGTTTCC +
Preference number: 5 (lower is better)
Translates to: RQIPRWQGCPCAVCFLSGASAFS*ADFRVS
Trigger: GGAAACCCGAAAATCAGCCAAGGAAAAGGCCGATGC...GCCCGAGAGGAAGCAGACGGCACAGGGACACCCCTGCCACCTTGGGATCTGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp GGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGGCATCGGCCTTTTCCTaGGCTGATTTTCGGGTTTCC +
Preference number: 5 (lower is better)
Translates to: GAGADTTGPPPSTRKAGGASAFS*ADFRVS
Trigger: GGAAACCCGAAAATCAGCCAAGGAAAAGGCCGATGC...CCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CAA 90 bp GTCTCCTCTGCAGAGCTACCAGGACTGCTGCGTGCTGGGACCAGGACCTCCATCAAGAAGAGCTGGTTATaGGTGAGGCCCAGGGTGGGG +
Preference number: 5 (lower is better)
Translates to: VSSAELPGLLRAGTRTSIKKSWL*VRPRVG
Trigger: CCCCACCCTGGGCCTCACCAATAACCAGCTCTTCTT...GATGGAGGTCCTGGTCCCAGCACGCAGCAGTCCTGGTAGCTCTGCAGAGGAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp GGGGTGTCCCTGTGCCGTCTGCTTCCTCTCGGGCAGGAGGATTCCAGCTTCCCGTGTTCTGAGAACTCCTaGGAATTGGAGAGGGAGCCG +
Preference number: 5 (lower is better)
Translates to: GVSLCRLLPLGQEDSSFPCSENS*ELEREP
Trigger: CGGCTCCCTCTCCAATTCCAAGGAGTTCTCAGAACA...CGGGAAGCTGGAATCCTCCTGCCCGAGAGGAAGCAGACGGCACAGGGACACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp CTGGCCTCCACACCTCTACTGGTCTCCACGCCCTTGCATGAGGTGACAGGAGCTAGACTGCGGGTCACGTaGAGAGCCAACACCATGGGC +
Preference number: 5 (lower is better)
Translates to: LASTPLLVSTPLHEVTGARLRVT*RANTMG
Trigger: GCCCATGGTGTTGGCTCTCAACGTGACCCGCAGTCT...AGCTCCTGTCACCTCATGCAAGGGCGTGGAGACCAGTAGAGGTGTGGAGGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp GGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGTCGGGGTTGACACAGTGGTATTaGTGGCGTATCTGGCGCTTG +
Preference number: 5 (lower is better)
Translates to: GADTTGPPPSTRKAGGSGLTQWY*WRIWRL
Trigger: CAAGCGCCAGATACGCCACAAATACCACTGTGTCAA...CCCCGACCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp TTGAGGGTCCTGACCCGACCTCATTCTGCTATAGCCATCAGTCCCCTGCTGTGGCTAGGGCTCCCACTGTaGGACTCAGGGGACGGAGGC +
Preference number: 5 (lower is better)
Translates to: LRVLTRPHSAIAISPLLWLGLPL*DSGDGG
Trigger: GCCTCCGTCCCCTGAGTCCAACAGTGGGAGCCCTAG...CCACAGCAGGGGACTGATGGCTATAGCAGAATGAGGTCGGGTCAGGACCCTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp GCGCACACGTGTGCCTGGGATGTCCGGCTCTTCACAGGGGATCAGACTGCGGGTACTGAGAGGGGACACTaGTGGCCAGCAGTGTATCTC +
Preference number: 5 (lower is better)
Translates to: AHTCAWDVRLFTGDQTAGTERGH*WPAVYL
Trigger: GAGATACACTGCTGGCCACAAGTGTCCCCTCTCAGT...ACCCGCAGTCTGATCCCCTGTGAAGAGCCGGACATCCCAGGCACACGTGTGCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp CTGCACCAGCTTGGAGGCAGATCCCAAGGTGGCAGGGGTGTCCCTGTGCCGTCTACTGAGAGGGGACACTaGTGGCCAGCAGTGTATCTC +
Preference number: 5 (lower is better)
Translates to: LHQLGGRSQGGRGVPVPSTERGH*WPAVYL
Trigger: GAGATACACTGCTGGCCACAAGTGTCCCCTCTCAGT...AGACGGCACAGGGACACCCCTGCCACCTTGGGATCTGCCTCCAAGCTGGTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS TCA 90 bp CCGTCTTGGCTCTCTCCGCTTCGTCCTTACCAGACTTCGCACTTGTaGGGCGGGTTCATGGGTGAGCCAGGTGGGCAGCGGAAGTGTTCT +
Preference number: 5 (lower is better)
Translates to: PSWLSPLRPYQTSHL*GGFMGEPGGQRKCS
Trigger: AGAACACTTCCGCTGCCCACCTGGCTCACCCATGAACCCGCCTCACAAGTGCGAAGTCTGGTAAGGACGAAGCGGAGAGAGCCAAGACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
ENST00000436918.6
ENST00000531334.1
CDS CCA 90 bp ACCAGGTCCTCCTCGTCCAGCGTGGCCCGCTTGTACGTCGACATCTaGGTCCTGGACTCTTGGTCCTGTGCTCCTTGTGGAAGATGGAAC +
Preference number: 5 (lower is better)
Translates to: TRSSSSSVARLYVDI*VLDSWSCAPCGRWN
Trigger: GTTCCATCTTCCACAAGGAGCACAGGACCAAGAGTCCAGGACCCAGATGTCGACGTACAAGCGGGCCACGCTGGACGAGGAGGACCTGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527991.2
CDS-3UTR CAA 90 bp CAGCTAGGGCTCCCACTGTTGGACTCAGGGGACGGAGGCAGGCTAGCTGAAGGGAACTCCATTAGAGGTTaGGCCCTGAGCTCCTCGATC +
Preference number: 5 (lower is better)
Translates to: QLGLPLLDSGDGGRLAEGNSIRG*ALSSSI
Trigger: GATCGAGGAGCTCAGGGCCAAACCTCTAATGGAGTT...CCCTTCAGCTAGCCTGCCTCCGTCCCCTGAGTCCAACAGTGGGAGCCCTAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp GCGCACACGTGTGCCTGGGATGTCCGGCTCTTCACAGGGGATCAGACTGCGGGTAACTCCATTAGAGGTTaGGCCCTGAGCTCCTCGATC +
Preference number: 5 (lower is better)
Translates to: AHTCAWDVRLFTGDQTAGNSIRG*ALSSSI
Trigger: GATCGAGGAGCTCAGGGCCAAACCTCTAATGGAGTT...ACCCGCAGTCTGATCCCCTGTGAAGAGCCGGACATCCCAGGCACACGTGTGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp GGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGTGGATCACGTTGCTGTaGGAGTTCTTGGAATCGGCA +
Preference number: 5 (lower is better)
Translates to: GAGADTTGPPPSTRKAGGWITLL*EFLESA
Trigger: TGCCGATTCCAAGAACTCCAACAGCAACGTGATCCA...CCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CAA 90 bp CAGCTAGGGCTCCCACTGTTGGACTCAGGGGACGGAGGCAGGCTAGCTGAAGGGCATCTGTCGGTGGTGTaGATGAGAGTGGAGATCTGC +
Preference number: 5 (lower is better)
Translates to: QLGLPLLDSGDGGRLAEGHLSVV*MRVEIC
Trigger: GCAGATCTCCACTCTCATCAACACCACCGACAGATG...CCCTTCAGCTAGCCTGCCTCCGTCCCCTGAGTCCAACAGTGGGAGCCCTAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp CCCGAATGCCTGCTGAAGGTGGCGCACACGTGTGCCTGGGATGTCCGGCTCTTCGGAAGACAGGTCTTCTaGGTCCCGTACATGACTTCC +
Preference number: 5 (lower is better)
Translates to: PECLLKVAHTCAWDVRLFGRQVF*VPYMTS
Trigger: GGAAGTCATGTACGGGACCAAGAAGACCTGTCTTCC...GAAGAGCCGGACATCCCAGGCACACGTGTGCGCCACCTTCAGCAGGCATTCGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp CCCATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGGAAGACAGGTCTTCTaGGTCCCGTACATGACTTCC +
Preference number: 5 (lower is better)
Translates to: PMVLVLTLQDHHPPRGRQGRQVF*VPYMTS
Trigger: GGAAGTCATGTACGGGACCAAGAAGACCTGTCTTCC...CTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CAA 90 bp GTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGTGGAAGACAGGTCTTCTaGGTCCCGTACATGACTTCC +
Preference number: 5 (lower is better)
Translates to: VLVLTLQDHHPPRGRQEGGRQVF*VPYMTS
Trigger: GGAAGTCATGTACGGGACCAAGAAGACCTGTCTTCC...ACCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CAA 90 bp CCTGCACCAGCTTGGAGGCAGATCCCAAGGTGGCAGGGGTGTCCCTGTGCCGTCAACGCAAAGCCCAGGTaGTTTTCTGTGTCACTCACG +
Preference number: 5 (lower is better)
Translates to: PAPAWRQIPRWQGCPCAVNAKPR*FSVSLT
Trigger: CGTGAGTGACACAGAAAACAACCTGGGCTTTGCGTT...GACGGCACAGGGACACCCCTGCCACCTTGGGATCTGCCTCCAAGCTGGTGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp CAAGCCCATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGTCGGCGAAGGTTGCTTaGACAAACATGGGGCCCAAC +
Preference number: 5 (lower is better)
Translates to: QAHGAGADTTGPPPSTRKSAKVA*TNMGPN
Trigger: GTTGGGCCCCATGTTTGTCAAAGCAACCTTCGCCGA...CTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATGGGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CAA 90 bp CTGGCCTCCACACCTCTACTGGTCTCCACGCCCTTGCATGAGGTGACAGGAGCTAAGAAGAGCTGGTTATaGGTGAGGCCCAGGGTGGGG +
Preference number: 5 (lower is better)
Translates to: LASTPLLVSTPLHEVTGAKKSWL*VRPRVG
Trigger: CCCCACCCTGGGCCTCACCAATAACCAGCTCTTCTT...AGCTCCTGTCACCTCATGCAAGGGCGTGGAGACCAGTAGAGGTGTGGAGGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp GTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGTTGTTCTGAGAACTCCTaGGAATTGGAGAGGGAGCCG +
Preference number: 5 (lower is better)
Translates to: VLVLTLQDHHPPRGRQEGCSENS*ELEREP
Trigger: CGGCTCCCTCTCCAATTCCAAGGAGTTCTCAGAACA...ACCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CAA 90 bp CGATACCCTGCACCAGCTTGGAGGCAGATCCCAAGGTGGCAGGGGTGTCCCTGTAGGCAGCTGTCTGATTaGGAGACTTGCTCTGTGGCC +
Preference number: 5 (lower is better)
Translates to: RYPAPAWRQIPRWQGCPCRQLSD*ETCSVA
Trigger: GGCCACAGAGCAAGTCTCCAAATCAGACAGCTGCCT...ACAGGGACACCCCTGCCACCTTGGGATCTGCCTCCAAGCTGGTGCAGGGTATCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp GCCAGCAGTGTATCTCTGACACAGTCTCACCCCGCAGGGCTCCTGCAGTCTCGAGTTCCCAGATGGTGTTaGAGGGTCCTGACCCGACCT +
Preference number: 5 (lower is better)
Translates to: ASSVSLTQSHPAGLLQSRVPRWC*RVLTRP
Trigger: AGGTCGGGTCAGGACCCTCAAACACCATCTGGGAAC...TCGAGACTGCAGGAGCCCTGCGGGGTGAGACTGTGTCAGAGATACACTGCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp CTAGGGCTCCCACTGTTGGACTCAGGGGACGGAGGCAGGCTAGCTGAAGGGGCACTCGATTCAGGGTGCTaGGTGTTCCCAGATGGTGTT +
Preference number: 5 (lower is better)
Translates to: LGLPLLDSGDGGRLAEGALDSGC*VFPDGV
Trigger: AACACCATCTGGGAACACCAAGCACCCTGAATCGAG...TGCCCCTTCAGCTAGCCTGCCTCCGTCCCCTGAGTCCAACAGTGGGAGCCCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp CCCATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGTAAGTCCAGCAGTTTaGCAGTCTTCCGATGCCCTG +
Preference number: 5 (lower is better)
Translates to: PMVLVLTLQDHHPPRGRQVSPAV*QSSDAL
Trigger: CAGGGCATCGGAAGACTGCAAAACTGCTGGACTTAC...CTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS GCA 90 bp GGGCTGACAGGGCAGCCAGCACTTATTCTCCCTAATTGTCTCATTTaGAGTTGTGGGTGCCACGCCTGGCCCCGAGTGTGTTGGGGAAGG +
Preference number: 5 (lower is better)
Translates to: GLTGQPALILPNCLI*SCGCHAWPRVCWGR
Trigger: CCTTCCCCAACACACTCGGGGCCAGGCGTGGCACCCACAACTGCAAATGAGACAATTAGGGAGAATAAGTGCTGGCTGCCCTGTCAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527991.2
CDS CCA 90 bp CTCCGCTTCGTCCTTACCAGACTTCGCACTTGTGAGGCGGGTTCATaGGTGAGCCAGGTGGGCAGCGGAAGTGTTCTGAGAACTCCTTGG +
Preference number: 5 (lower is better)
Translates to: LRFVLTRLRTCEAGS*VSQVGSGSVLRTPW
Trigger: CCAAGGAGTTCTCAGAACACTTCCGCTGCCCACCTGGCTCACCCATGAACCCGCCTCACAAGTGCGAAGTCTGGTAAGGACGAAGCGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264205.10
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
ENST00000436918.6
ENST00000531334.1
CDS CCA 90 bp CCTCCTCGTCCAGCGTGGCCCGCTTGTACGTCGACATCTGGGTCCTaGACTCTTGGTCCTGTGCTCCTTGTGGAAGATGGAACTGCTTCT +
Preference number: 5 (lower is better)
Translates to: PPRPAWPACTSTSGS*TLGPVLLVEDGTAS
Trigger: AGAAGCAGTTCCATCTTCCACAAGGAGCACAGGACCAAGAGTCCAGGACCCAGATGTCGACGTACAAGCGGGCCACGCTGGACGAGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527991.2
CDS-3UTR CAA 90 bp GCTCCTGGGCTCCCGTGGAGGTTAGCCCTGCAGGCACCGGGGAAATGGGGCTATTTGATGATTGCTTGGTaGTGTTCCCAGAGGTTGCTG +
Preference number: 5 (lower is better)
Translates to: APGLPWRLALQAPGKWGYLMIAW*CSQRLL
Trigger: CAGCAACCTCTGGGAACACAACCAAGCAATCATCAA...ATAGCCCCATTTCCCCGGTGCCTGCAGGGCTAACCTCCACGGGAGCCCAGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp CCGGCAGACCTGAGCCATGAGTGTGGTCTCCATTCCCTCGGGCTGCACCCCCAGTTGATGATTGCTTGGTaGTGTTCCCAGAGGTTGCTG +
Preference number: 5 (lower is better)
Translates to: PADLSHECGLHSLGLHPQLMIAW*CSQRLL
Trigger: CAGCAACCTCTGGGAACACAACCAAGCAATCATCAA...CTGGGGGTGCAGCCCGAGGGAATGGAGACCACACTCATGGCTCAGGTCTGCCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CAA 90 bp CCGGCAGACCTGAGCCATGAGTGTGGTCTCCATTCCCTCGGGCTGCACCCCCAGGTGCTTGATGATTGCTaGGTTGTGTTCCCAGAGGTT +
Preference number: 5 (lower is better)
Translates to: PADLSHECGLHSLGLHPQVLDDC*VVFPEV
Trigger: AACCTCTGGGAACACAACCAAGCAATCATCAAGCAC...CTGGGGGTGCAGCCCGAGGGAATGGAGACCACACTCATGGCTCAGGTCTGCCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CAA 90 bp CAAGCCCATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGAACTCCATTAGAGGTTaGGCCCTGAGCTCCTCGATC +
Preference number: 5 (lower is better)
Translates to: QAHGAGADTTGPPPSTRKNSIRG*ALSSSI
Trigger: GATCGAGGAGCTCAGGGCCAAACCTCTAATGGAGTT...CTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATGGGCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CAA 90 bp CAAGCCCATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGCATCTGTCGGTGGTGTaGATGAGAGTGGAGATCTGC +
Preference number: 5 (lower is better)
Translates to: QAHGAGADTTGPPPSTRKHLSVV*MRVEIC
Trigger: GCAGATCTCCACTCTCATCAACACCACCGACAGATG...CTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATGGGCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CAA 90 bp GTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGGGTAACGCAAAGCCCAGGTaGTTTTCTGTGTCACTCACG +
Preference number: 5 (lower is better)
Translates to: VLVLTLQDHHPPRGRQEGNAKPR*FSVSLT
Trigger: CGTGAGTGACACAGAAAACAACCTGGGCTTTGCGTT...ACCCTCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CAA 90 bp GTATTTGTGGCGTATCTGGCGCTTGTCAGTGTGGGGCCCAGGCCTGATGAGCCATCGGTGGCTATGCTCTaGCTGTCCTCGGCGAAGGTT +
Preference number: 5 (lower is better)
Translates to: VFVAYLALVSVGPRPDEPSVAML*LSSAKV
Trigger: AACCTTCGCCGAGGACAGCAAGAGCATAGCCACCGA...TGGCTCATCAGGCCTGGGCCCCACACTGACAAGCGCCAGATACGCCACAAATAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp CACGTGTGCCTGGGATGTCCGGCTCTTCACAGGGGATCAGACTGCGGGTCACGTGCATCGGCCTTTTCCTaGGCTGATTTTCGGGTTTCC +
Preference number: 5 (lower is better)
Translates to: HVCLGCPALHRGSDCGSRASAFS*ADFRVS
Trigger: GGAAACCCGAAAATCAGCCAAGGAAAAGGCCGATGC...ACGTGACCCGCAGTCTGATCCCCTGTGAAGAGCCGGACATCCCAGGCACACGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp CCGGCAGACCTGAGCCATGAGTGTGGTCTCCATTCCCTCGGGCTGCACCCCCAGACTTTGTCCAGCTCCTaGGGATCCATGATGAAGTTG +
Preference number: 5 (lower is better)
Translates to: PADLSHECGLHSLGLHPQTLSSS*GSMMKL
Trigger: CAACTTCATCATGGATCCCAAGGAGCTGGACAAAGT...CTGGGGGTGCAGCCCGAGGGAATGGAGACCACACTCATGGCTCAGGTCTGCCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CAA 90 bp CACGTGTGCCTGGGATGTCCGGCTCTTCACAGGGGATCAGACTGCGGGTCACGTTGTTCTGAGAACTCCTaGGAATTGGAGAGGGAGCCG +
Preference number: 5 (lower is better)
Translates to: HVCLGCPALHRGSDCGSRCSENS*ELEREP
Trigger: CGGCTCCCTCTCCAATTCCAAGGAGTTCTCAGAACA...ACGTGACCCGCAGTCTGATCCCCTGTGAAGAGCCGGACATCCCAGGCACACGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp GTTCCCAGATGGTGTTTGAGGGTCCTGACCCGACCTCATTCTGCTATAGCCATCTGGCGTATCTGGCGCTaGTCAGTGTGGGGCCCAGGC +
Preference number: 5 (lower is better)
Translates to: VPRWCLRVLTRPHSAIAIWRIWR*SVWGPG
Trigger: GCCTGGGCCCCACACTGACAAGCGCCAGATACGCCA...GATGGCTATAGCAGAATGAGGTCGGGTCAGGACCCTCAAACACCATCTGGGAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp GGGGATCAGACTGCGGGTCACGTTGAGAGCCAACACCATGGGCTCGGTTCCGGCTTGACACAGTGGTATTaGTGGCGTATCTGGCGCTTG +
Preference number: 5 (lower is better)
Translates to: GDQTAGHVESQHHGLGSGLTQWY*WRIWRL
Trigger: CAAGCGCCAGATACGCCACAAATACCACTGTGTCAA...GCCGGAACCGAGCCCATGGTGTTGGCTCTCAACGTGACCCGCAGTCTGATCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp GTCTCCTCTGCAGAGCTACCAGGACTGCTGCGTGCTGGGACCAGGACCTCCATCCTCGATTCAGGGTGCTaGGTGTTCCCAGATGGTGTT +
Preference number: 5 (lower is better)
Translates to: VSSAELPGLLRAGTRTSILDSGC*VFPDGV
Trigger: AACACCATCTGGGAACACCAAGCACCCTGAATCGAG...GATGGAGGTCCTGGTCCCAGCACGCAGCAGTCCTGGTAGCTCTGCAGAGGAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp CAAGCCCATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCTGCAAGTACTATCTaGATTCAACCCAGGGGCCGA +
Preference number: 5 (lower is better)
Translates to: QAHGAGADTTGPPPSTRKAASTI*IQPRGR
Trigger: TCGGCCCCTGGGTTGAATCAAGATAGTACTTGCAGC...CTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATGGGCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS TCA 90 bp CGCTGTAGTTGCTGTACTGCTCTACCATGCACTCGGTCTGACGCTTaGAGGCCTCCACGGATGAGTTCTTCCACCATGGCCGGAGGTTCC +
Preference number: 5 (lower is better)
Translates to: RCSCCTALPCTRSDA*RPPRMSSSTMAGGS
Trigger: GGAACCTCCGGCCATGGTGGAAGAACTCATCCGTGGAGGCCTTCAAGCGTCAGACCGAGTGCATGGTAGAGCAGTACAGCAACTACAGCG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264205.10
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
ENST00000436918.6
ENST00000649812.1
CDS CCA 90 bp AGAAGTCATGGCAGGGGTCCACTGTGGGGTCCATGGAGCTCAAGATaGAGCTGGTCACTGAGACACAAGCTTCGCTCAGGCACACAGAGG +
Preference number: 5 (lower is better)
Translates to: RSHGRGPLWGPWSSR*SWSLRHKLRSGTQR
Trigger: CCTCTGTGTGCCTGAGCGAAGCTTGTGTCTCAGTGACCAGCTCCATCTTGAGCTCCATGGACCCCACAGTGGACCCCTGCCATGACTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000264205.10
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
ENST00000436918.6
ENST00000473505.5
ENST00000481130.6
ENST00000526194.5
ENST00000649812.1
CDS CCA 90 bp CTCACGCTGGCCGTGGAGTTTTCGAGGAGGTGCTTGATGATTGCTTaGTTGTGTTCCCAGAGGTTGCTGAAGGTCCCCCAGCGTGAGTGG +
Preference number: 5 (lower is better)
Translates to: LTLAVEFSRRCLMIA*LCSQRLLKVPQREW
Trigger: CCACTCACGCTGGGGGACCTTCAGCAACCTCTGGGAACACAACCAAGCAATCATCAAGCACCTCCTCGAAAACTCCACGGCCAGCGTGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000264205.10
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
ENST00000436918.6
ENST00000473505.5
ENST00000526194.5
ENST00000649812.1
CDS-3UTR CAA 90 bp GGGGATCAGACTGCGGGTCACGTTGAGAGCCAACACCATGGGCTCGGTTCCGGCGTGCTTGATGATTGCTaGGTTGTGTTCCCAGAGGTT +
Preference number: 5 (lower is better)
Translates to: GDQTAGHVESQHHGLGSGVLDDC*VVFPEV
Trigger: AACCTCTGGGAACACAACCAAGCAATCATCAAGCAC...GCCGGAACCGAGCCCATGGTGTTGGCTCTCAACGTGACCCGCAGTCTGATCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp CCGGCAGACCTGAGCCATGAGTGTGGTCTCCATTCCCTCGGGCTGCACCCCCAGTTTTCGAGGAGGTGCTaGATGATTGCTTGGTTGTGT +
Preference number: 5 (lower is better)
Translates to: PADLSHECGLHSLGLHPQFSRRC*MIAWLC
Trigger: ACACAACCAAGCAATCATCAAGCACCTCCTCGAAAA...CTGGGGGTGCAGCCCGAGGGAATGGAGACCACACTCATGGCTCAGGTCTGCCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CAA 90 bp CAGCCCGAAAAGGTGGGACTGAGAGGGGACACTTGTGGCCAGCAGTGTATCTCTTCCTGGAAGTTGTCCTaGGCCCAGGGACCTGTGATG +
Preference number: 5 (lower is better)
Translates to: QPEKVGLRGDTCGQQCISSWKLS*AQGPVM
Trigger: CATCACAGGTCCCTGGGCCAAGGACAACTTCCAGGA...AGAGATACACTGCTGGCCACAAGTGTCCCCTCTCAGTCCCACCTTTTCGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp CTAGGGCTCCCACTGTTGGACTCAGGGGACGGAGGCAGGCTAGCTGAAGGGGCAACTTTGTCCAGCTCCTaGGGATCCATGATGAAGTTG +
Preference number: 5 (lower is better)
Translates to: LGLPLLDSGDGGRLAEGATLSSS*GSMMKL
Trigger: CAACTTCATCATGGATCCCAAGGAGCTGGACAAAGT...TGCCCCTTCAGCTAGCCTGCCTCCGTCCCCTGAGTCCAACAGTGGGAGCCCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp CCGGCAGACCTGAGCCATGAGTGTGGTCTCCATTCCCTCGGGCTGCACCCCCAGACCCTCCATGAGAAGTaGAAAAACCGCATGGCATTT +
Preference number: 5 (lower is better)
Translates to: PADLSHECGLHSLGLHPQTLHEK*KNRMAF
Trigger: AAATGCCATGCGGTTTTTCAACTTCTCATGGAGGGT...CTGGGGGTGCAGCCCGAGGGAATGGAGACCACACTCATGGCTCAGGTCTGCCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CAA 90 bp ATCCCAAGGTGGCAGGGGTGTCCCTGTGCCGTCTGCTTCCTCTCGGGCAGGAGGACCCTCCATGAGAAGTaGAAAAACCGCATGGCATTT +
Preference number: 5 (lower is better)
Translates to: IPRWQGCPCAVCFLSGRRTLHEK*KNRMAF
Trigger: AAATGCCATGCGGTTTTTCAACTTCTCATGGAGGGT...CCTCCTGCCCGAGAGGAAGCAGACGGCACAGGGACACCCCTGCCACCTTGGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp GCGCACACGTGTGCCTGGGATGTCCGGCTCTTCACAGGGGATCAGACTGCGGGTTCAGTGGGGCTTCCCTaGTCCACAGGTTATTTAGAA +
Preference number: 5 (lower is better)
Translates to: AHTCAWDVRLFTGDQTAGSVGLP*STGYLE
Trigger: TTCTAAATAACCTGTGGACAAGGGAAGCCCCACTGA...ACCCGCAGTCTGATCCCCTGTGAAGAGCCGGACATCCCAGGCACACGTGTGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS TCA 90 bp GTTGGAGTTCTTGGAATCGGCACTGACATAGACAGAGAAGAAGGGTaGGGTGCGGTAGTGGGCGGTGACCACCTGCAGGGTGTCCTGGAA +
Preference number: 5 (lower is better)
Translates to: VGVLGIGTDIDREEG*GAVVGGDHLQGVLE
Trigger: TTCCAGGACACCCTGCAGGTGGTCACCGCCCACTACCGCACCTCACCCTTCTTCTCTGTCTATGTCAGTGCCGATTCCAAGAACTCCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264205.10
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
ENST00000436918.6
ENST00000526194.5
ENST00000649812.1
CDS TCA 90 bp TTCTCCAAGCACAAACTGCAAAGCAGACCAGAAAGCAGCTGGTCCTaGCTCCAGGGCTACCCACAGATGCCCCTGCACCTCCTCATGCTC +
Preference number: 5 (lower is better)
Translates to: FSKHKLQSRPESSWS*LQGYPQMPLHLLML
Trigger: GAGCATGAGGAGGTGCAGGGGCATCTGTGGGTAGCCCTGGAGTCAGGACCAGCTGCTTTCTGGTCTGCTTTGCAGTTTGTGCTTGGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481130.6
CDS GCA 90 bp GGTCTCGTTCATGCACGCACGGTAGTATACTTGCGCCTTTCTCTCTaGCTCGCTCACGCTGGCCGTGGAGTTTTCGAGGAGGTGCTTGAT +
Preference number: 5 (lower is better)
Translates to: GLVHARTVVYLRLSL*LAHAGRGVFEEVLD
Trigger: ATCAAGCACCTCCTCGAAAACTCCACGGCCAGCGTGAGCGAGGCAGAGAGAAAGGCGCAAGTATACTACCGTGCGTGCATGAACGAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000264205.10
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
ENST00000436918.6
ENST00000473505.5
ENST00000526194.5
ENST00000649812.1
CDS GCA 90 bp GGCCCGCTTGTACGTCGACATCTGGGTCCTGGACTCTTGGTCCTGTaGTCCTTGTGGAAGATGGAACTGCTTCTTCAGGTGGGAACCTCA +
Preference number: 5 (lower is better)
Translates to: GPLVRRHLGPGLLVL*SLWKMELLLQVGTS
Trigger: TGAGGTTCCCACCTGAAGAAGCAGTTCCATCTTCCACAAGGAGCACAGGACCAAGAGTCCAGGACCCAGATGTCGACGTACAAGCGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527991.2
CDS CCA 90 bp CAGCTGGGATTGGAACCCAAAGCTGTTGATGCCCGAGCCCACCAGTaGATCAGAGGTGGATCCTGGGAGATGTTGGCAGAGATGCAAGGA +
Preference number: 5 (lower is better)
Translates to: QLGLEPKAVDARAHQ*IRGGSWEMLAEMQG
Trigger: TCCTTGCATCTCTGCCAACATCTCCCAGGATCCACCTCTGATCCACTGGTGGGCTCGGGCATCAACAGCTTTGGGTTCCAATCCCAGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473505.5
CDS CCA 90 bp GACATCTGGGTCCTGGACTCTTGGTCCTGTGCTCCTTGTGGAAGATaGAACTGCTTCTTCAGGTGGGAACCTCACAGAGTCTGGGTGCCC +
Preference number: 5 (lower is better)
Translates to: DIWVLDSWSCAPCGR*NCFFRWEPHRVWVP
Trigger: GGGCACCCAGACTCTGTGAGGTTCCCACCTGAAGAAGCAGTTCCATCTTCCACAAGGAGCACAGGACCAAGAGTCCAGGACCCAGATGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527991.2
CDS-3UTR CAA 90 bp TTGAGGGTCCTGACCCGACCTCATTCTGCTATAGCCATCAGTCCCCTGCTGTGGACACAGAGGGGGATCTaGTCTGGTACTGGATGCCCA +
Preference number: 5 (lower is better)
Translates to: LRVLTRPHSAIAISPLLWTQRGI*SGTGCP
Trigger: TGGGCATCCAGTACCAGACAAGATCCCCCTCTGTGT...CCACAGCAGGGGACTGATGGCTATAGCAGAATGAGGTCGGGTCAGGACCCTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp AAGCATTTGACACAGTGGTATTTGTGGCGTATCTGGCGCTTGTCAGTGTGGGGCCCATCAGGGACTGGGTaGGCCTTGATCCAGCCCCCA +
Preference number: 5 (lower is better)
Translates to: KHLTQWYLWRIWRLSVWGPSGTG*ALIQPP
Trigger: TGGGGGCTGGATCAAGGCCAACCCAGTCCCTGATGG...GCCCCACACTGACAAGCGCCAGATACGCCACAAATACCACTGTGTCAAATGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp CATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGTGCTTGATGATTGCTaGGTTGTGTTCCCAGAGGTT +
Preference number: 5 (lower is better)
Translates to: HGAGADTTGPPPSTRKAGVLDDC*VVFPEV
Trigger: AACCTCTGGGAACACAACCAAGCAATCATCAAGCAC...TCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CAA 90 bp CCCATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGTTTTCGAGGAGGTGCTaGATGATTGCTTGGTTGTGT +
Preference number: 5 (lower is better)
Translates to: PMVLVLTLQDHHPPRGRQFSRRC*MIAWLC
Trigger: ACACAACCAAGCAATCATCAAGCACCTCCTCGAAAA...CTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CAA 90 bp CAGCCCGAAAAGGTGGGACTGAGAGGGGACACTTGTGGCCAGCAGTGTATCTCTTGTGGGATGGTGATGTaGGCCAGTGCCGTCTCAAAG +
Preference number: 5 (lower is better)
Translates to: QPEKVGLRGDTCGQQCISCGMVM*ASAVSK
Trigger: CTTTGAGACGGCACTGGCCAACATCACCATCCCACA...AGAGATACACTGCTGGCCACAAGTGTCCCCTCTCAGTCCCACCTTTTCGGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp GGGGATCAGACTGCGGGTCACGTTGAGAGCCAACACCATGGGCTCGGTTCCGGCGGATCCATGATGAAGTaGGGGTATCCTATCATGTTG +
Preference number: 5 (lower is better)
Translates to: GDQTAGHVESQHHGLGSGGSMMK*GYPIML
Trigger: CAACATGATAGGATACCCCAACTTCATCATGGATCC...GCCGGAACCGAGCCCATGGTGTTGGCTCTCAACGTGACCCGCAGTCTGATCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp CTAGGGCTCCCACTGTTGGACTCAGGGGACGGAGGCAGGCTAGCTGAAGGGGCAACCCTCCATGAGAAGTaGAAAAACCGCATGGCATTT +
Preference number: 5 (lower is better)
Translates to: LGLPLLDSGDGGRLAEGATLHEK*KNRMAF
Trigger: AAATGCCATGCGGTTTTTCAACTTCTCATGGAGGGT...TGCCCCTTCAGCTAGCCTGCCTCCGTCCCCTGAGTCCAACAGTGGGAGCCCTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp CAGTCTCGATTCAGGGTGCTTGGTGTTCCCAGATGGTGTTTGAGGGTCCTGACCTCCCCTGCTGTGGCTTaGGGGATCAGAACTTCCCAG +
Preference number: 5 (lower is better)
Translates to: QSRFRVLGVPRWCLRVLTSPAVA*GIRTSQ
Trigger: CTGGGAAGTTCTGATCCCCAAAGCCACAGCAGGGGA...GGTCAGGACCCTCAAACACCATCTGGGAACACCAAGCACCCTGAATCGAGACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp GTATTTGTGGCGTATCTGGCGCTTGTCAGTGTGGGGCCCAGGCCTGATGAGCCACTCGATTCAGGGTGCTaGGTGTTCCCAGATGGTGTT +
Preference number: 5 (lower is better)
Translates to: VFVAYLALVSVGPRPDEPLDSGC*VFPDGV
Trigger: AACACCATCTGGGAACACCAAGCACCCTGAATCGAG...TGGCTCATCAGGCCTGGGCCCCACACTGACAAGCGCCAGATACGCCACAAATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp GTATTTGTGGCGTATCTGGCGCTTGTCAGTGTGGGGCCCAGGCCTGATGAGCCAGTAAGTCCAGCAGTTTaGCAGTCTTCCGATGCCCTG +
Preference number: 5 (lower is better)
Translates to: VFVAYLALVSVGPRPDEPVSPAV*QSSDAL
Trigger: CAGGGCATCGGAAGACTGCAAAACTGCTGGACTTAC...TGGCTCATCAGGCCTGGGCCCCACACTGACAAGCGCCAGATACGCCACAAATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS TCA 90 bp TCCAGCCCCCGAGCCTCTCAATCAACTCCATTAGAGGTTTGGCCCTaGGCTCCTCGATCCTGGTCTCGTTCATGCACGCACGGTAGTATA +
Preference number: 5 (lower is better)
Translates to: SSPRASQSTPLEVWP*APRSWSRSCTHGSI
Trigger: TATACTACCGTGCGTGCATGAACGAGACCAGGATCGAGGAGCTCAGGGCCAAACCTCTAATGGAGTTGATTGAGAGGCTCGGGGGCTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000264205.10
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
ENST00000436918.6
ENST00000526194.5
ENST00000649812.1
CDS-3UTR CAA 90 bp CTGGCCTCCACACCTCTACTGGTCTCCACGCCCTTGCATGAGGTGACAGGAGCTTTGATGATTGCTTGGTaGTGTTCCCAGAGGTTGCTG +
Preference number: 5 (lower is better)
Translates to: LASTPLLVSTPLHEVTGALMIAW*CSQRLL
Trigger: CAGCAACCTCTGGGAACACAACCAAGCAATCATCAA...AGCTCCTGTCACCTCATGCAAGGGCGTGGAGACCAGTAGAGGTGTGGAGGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp CAGCCCGAAAAGGTGGGACTGAGAGGGGACACTTGTGGCCAGCAGTGTATCTCTAACTCCATTAGAGGTTaGGCCCTGAGCTCCTCGATC +
Preference number: 5 (lower is better)
Translates to: QPEKVGLRGDTCGQQCISNSIRG*ALSSSI
Trigger: GATCGAGGAGCTCAGGGCCAAACCTCTAATGGAGTT...AGAGATACACTGCTGGCCACAAGTGTCCCCTCTCAGTCCCACCTTTTCGGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp GCTGGCTTCTGCTTCAGCTACTTCTCGGGTTCCTGTCTCCTCTGCAGAGCTACCCATCTGTCGGTGGTGTaGATGAGAGTGGAGATCTGC +
Preference number: 5 (lower is better)
Translates to: AGFCFSYFSGSCLLCRATHLSVV*MRVEIC
Trigger: GCAGATCTCCACTCTCATCAACACCACCGACAGATG...GGTAGCTCTGCAGAGGAGACAGGAACCCGAGAAGTAGCTGAAGCAGAAGCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp CAGTCTCGATTCAGGGTGCTTGGTGTTCCCAGATGGTGTTTGAGGGTCCTGACCTCGGCGAAGGTTGCTTaGACAAACATGGGGCCCAAC +
Preference number: 5 (lower is better)
Translates to: QSRFRVLGVPRWCLRVLTSAKVA*TNMGPN
Trigger: GTTGGGCCCCATGTTTGTCAAAGCAACCTTCGCCGA...GGTCAGGACCCTCAAACACCATCTGGGAACACCAAGCACCCTGAATCGAGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp GTTCCCAGATGGTGTTTGAGGGTCCTGACCCGACCTCATTCTGCTATAGCCATCTCGGTGGCTATGCTCTaGCTGTCCTCGGCGAAGGTT +
Preference number: 5 (lower is better)
Translates to: VPRWCLRVLTRPHSAIAISVAML*LSSAKV
Trigger: AACCTTCGCCGAGGACAGCAAGAGCATAGCCACCGA...GATGGCTATAGCAGAATGAGGTCGGGTCAGGACCCTCAAACACCATCTGGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp CAAGCCCATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGGATCCATGATGAAGTaGGGGTATCCTATCATGTTG +
Preference number: 5 (lower is better)
Translates to: QAHGAGADTTGPPPSTRKGSMMK*GYPIML
Trigger: CAACATGATAGGATACCCCAACTTCATCATGGATCC...CTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATGGGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CAA 90 bp CAAGCCCATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGACCCTCCATGAGAAGTaGAAAAACCGCATGGCATTT +
Preference number: 5 (lower is better)
Translates to: QAHGAGADTTGPPPSTRKTLHEK*KNRMAF
Trigger: AAATGCCATGCGGTTTTTCAACTTCTCATGGAGGGT...CTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATGGGCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CAA 90 bp CACGTGTGCCTGGGATGTCCGGCTCTTCACAGGGGATCAGACTGCGGGTCACGTGTCATACTCCCGTCCTaGATCATCAAAAGCATGAGT +
Preference number: 5 (lower is better)
Translates to: HVCLGCPALHRGSDCGSRVILPS*IIKSMS
Trigger: ACTCATGCTTTTGATGATCAAGGACGGGAGTATGAC...ACGTGACCCGCAGTCTGATCCCCTGTGAAGAGCCGGACATCCCAGGCACACGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp CATGGTGCTGGTGCTGACACTACAGGACCACCACCCTCCACGCGGAAGGCAGGAGTCATACTCCCGTCCTaGATCATCAAAAGCATGAGT +
Preference number: 5 (lower is better)
Translates to: HGAGADTTGPPPSTRKAGVILPS*IIKSMS
Trigger: ACTCATGCTTTTGATGATCAAGGACGGGAGTATGAC...TCCTGCCTTCCGCGTGGAGGGTGGTGGTCCTGTAGTGTCAGCACCAGCACCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000415912.6
ENST00000649812.1
CDS-3UTR CAA 90 bp GTTCCCAGATGGTGTTTGAGGGTCCTGACCCGACCTCATTCTGCTATAGCCATCAAGAAGAGCTGGTTATaGGTGAGGCCCAGGGTGGGG +
Preference number: 5 (lower is better)
Translates to: VPRWCLRVLTRPHSAIAIKKSWL*VRPRVG
Trigger: CCCCACCCTGGGCCTCACCAATAACCAGCTCTTCTT...GATGGCTATAGCAGAATGAGGTCGGGTCAGGACCCTCAAACACCATCTGGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp GCTGTGGCTTTGGGGATCAGAACTTCCCAGCTAGGGCTCCCACTGTTGGACTCAGCTGCAAGTACTATCTaGATTCAACCCAGGGGCCGA +
Preference number: 5 (lower is better)
Translates to: AVALGIRTSQLGLPLLDSAASTI*IQPRGR
Trigger: TCGGCCCCTGGGTTGAATCAAGATAGTACTTGCAGC...TGAGTCCAACAGTGGGAGCCCTAGCTGGGAAGTTCTGATCCCCAAAGCCACAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS GCA 90 bp CAGGATGATCTCGGTGGCTATGCTCTTGCTGTCCTCGGCGAAGGTTaGTTTGACAAACATGGGGCCCAACGCAAAGCCCAGGTTGTTTTC +
Preference number: 5 (lower is better)
Translates to: QDDLGGYALAVLGEG*FDKHGAQRKAQVVF
Trigger: GAAAACAACCTGGGCTTTGCGTTGGGCCCCATGTTTGTCAAAGCAACCTTCGCCGAGGACAGCAAGAGCATAGCCACCGAGATCATCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264205.10
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
ENST00000436918.6
ENST00000470394.1
ENST00000526194.5
ENST00000649812.1
CDS CCA 90 bp GTACGTCGACATCTGGGTCCTGGACTCTTGGTCCTGTGCTCCTTGTaGAAGATGGAACTGCTTCTTCAGGTGGGAACCTCACAGAGTCTG +
Preference number: 5 (lower is better)
Translates to: VRRHLGPGLLVLCSL*KMELLLQVGTSQSL
Trigger: CAGACTCTGTGAGGTTCCCACCTGAAGAAGCAGTTCCATCTTCCACAAGGAGCACAGGACCAAGAGTCCAGGACCCAGATGTCGACGTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527991.2
CDS-3UTR CAA 90 bp TTGAGGGTCCTGACCCGACCTCATTCTGCTATAGCCATCAGTCCCCTGCTGTGGTGGATCACGTTGCTGTaGGAGTTCTTGGAATCGGCA +
Preference number: 5 (lower is better)
Translates to: LRVLTRPHSAIAISPLLWWITLL*EFLESA
Trigger: TGCCGATTCCAAGAACTCCAACAGCAACGTGATCCA...CCACAGCAGGGGACTGATGGCTATAGCAGAATGAGGTCGGGTCAGGACCCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp TTGAGGGTCCTGACCCGACCTCATTCTGCTATAGCCATCAGTCCCCTGCTGTGGTCCACCTGGATCACGTaGCTGTTGGAGTTCTTGGAA +
Preference number: 5 (lower is better)
Translates to: LRVLTRPHSAIAISPLLWSTWIT*LLEFLE
Trigger: TTCCAAGAACTCCAACAGCAACGTGATCCAGGTGGA...CCACAGCAGGGGACTGATGGCTATAGCAGAATGAGGTCGGGTCAGGACCCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp GTTCCCAGATGGTGTTTGAGGGTCCTGACCCGACCTCATTCTGCTATAGCCATCAGAAAAGGCAACCAGTaGATGGCGGGTGCCAAGGTC +
Preference number: 5 (lower is better)
Translates to: VPRWCLRVLTRPHSAIAIRKGNQ*MAGAKV
Trigger: GACCTTGGCACCCGCCATCAACTGGTTGCCTTTTCT...GATGGCTATAGCAGAATGAGGTCGGGTCAGGACCCTCAAACACCATCTGGGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp TATAGCCATCAGTCCCCTGCTGTGGCTTTGGGGATCAGAACTTCCCAGCTAGGGCATCTGTCGGTGGTGTaGATGAGAGTGGAGATCTGC +
Preference number: 5 (lower is better)
Translates to: YSHQSPAVALGIRTSQLGHLSVV*MRVEIC
Trigger: GCAGATCTCCACTCTCATCAACACCACCGACAGATG...CCCTAGCTGGGAAGTTCTGATCCCCAAAGCCACAGCAGGGGACTGATGGCTATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp TGGATGACGGTGCTCAGAGAGAGGATTTGGGTCCTGCGGGAGGTGACAGCTGTTAACGCAAAGCCCAGGTaGTTTTCTGTGTCACTCACG +
Preference number: 5 (lower is better)
Translates to: WMTVLRERIWVLREVTAVNAKPR*FSVSLT
Trigger: CGTGAGTGACACAGAAAACAACCTGGGCTTTGCGTT...AACAGCTGTCACCTCCCGCAGGACCCAAATCCTCTCTCTGAGCACCGTCATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp GAGTGGGGAAGAGAGGGAGTAAATCAGTGGGGCTTCCCTTGTCCACAGGTTATTGTTCCCAGATGGTGTTaGAGGGTCCTGACCCGACCT +
Preference number: 5 (lower is better)
Translates to: EWGREGVNQWGFPCPQVIVPRWC*RVLTRP
Trigger: AGGTCGGGTCAGGACCCTCAAACACCATCTGGGAAC...AATAACCTGTGGACAAGGGAAGCCCCACTGATTTACTCCCTCTCTTCCCCACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS CCA 90 bp AAAGCTGTTGATGCCCGAGCCCACCAGTGGATCAGAGGTGGATCCTaGGAGATGTTGGCAGAGATGCAAGGAGAAATAGCTCCATTCAGG +
Preference number: 5 (lower is better)
Translates to: KAVDARAHQWIRGGS*EMLAEMQGEIAPFR
Trigger: CCTGAATGGAGCTATTTCTCCTTGCATCTCTGCCAACATCTCCCAGGATCCACCTCTGATCCACTGGTGGGCTCGGGCATCAACAGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473505.5
CDS-3UTR CAA 90 bp TTGAGGGTCCTGACCCGACCTCATTCTGCTATAGCCATCAGTCCCCTGCTGTGGTTGATGATTGCTTGGTaGTGTTCCCAGAGGTTGCTG +
Preference number: 5 (lower is better)
Translates to: LRVLTRPHSAIAISPLLWLMIAW*CSQRLL
Trigger: CAGCAACCTCTGGGAACACAACCAAGCAATCATCAA...CCACAGCAGGGGACTGATGGCTATAGCAGAATGAGGTCGGGTCAGGACCCTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp TTGAGGGTCCTGACCCGACCTCATTCTGCTATAGCCATCAGTCCCCTGCTGTGGGTGCTTGATGATTGCTaGGTTGTGTTCCCAGAGGTT +
Preference number: 5 (lower is better)
Translates to: LRVLTRPHSAIAISPLLWVLDDC*VVFPEV
Trigger: AACCTCTGGGAACACAACCAAGCAATCATCAAGCAC...CCACAGCAGGGGACTGATGGCTATAGCAGAATGAGGTCGGGTCAGGACCCTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp GAGTGGGGAAGAGAGGGAGTAAATCAGTGGGGCTTCCCTTGTCCACAGGTTATTCGCACGGTAGTATACTaGCGCCTTTCTCTCTGCCTC +
Preference number: 5 (lower is better)
Translates to: EWGREGVNQWGFPCPQVIRTVVY*RLSLCL
Trigger: GAGGCAGAGAGAAAGGCGCAAGTATACTACCGTGCG...AATAACCTGTGGACAAGGGAAGCCCCACTGATTTACTCCCTCTCTTCCCCACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp TATAGCCATCAGTCCCCTGCTGTGGCTTTGGGGATCAGAACTTCCCAGCTAGGGTGGATCACGTTGCTGTaGGAGTTCTTGGAATCGGCA +
Preference number: 5 (lower is better)
Translates to: YSHQSPAVALGIRTSQLGWITLL*EFLESA
Trigger: TGCCGATTCCAAGAACTCCAACAGCAACGTGATCCA...CCCTAGCTGGGAAGTTCTGATCCCCAAAGCCACAGCAGGGGACTGATGGCTATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp AAGCATTTGACACAGTGGTATTTGTGGCGTATCTGGCGCTTGTCAGTGTGGGGCGGTCAAGGAAGGAGCTaGTTTTCCGCACCAGGTTCC +
Preference number: 5 (lower is better)
Translates to: KHLTQWYLWRIWRLSVWGGQGRS*FSAPGS
Trigger: GGAACCTGGTGCGGAAAACAAGCTCCTTCCTTGACC...GCCCCACACTGACAAGCGCCAGATACGCCACAAATACCACTGTGTCAAATGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp CAGCCCGAAAAGGTGGGACTGAGAGGGGACACTTGTGGCCAGCAGTGTATCTCTTCAGTGGGGCTTCCCTaGTCCACAGGTTATTTAGAA +
Preference number: 5 (lower is better)
Translates to: QPEKVGLRGDTCGQQCISSVGLP*STGYLE
Trigger: TTCTAAATAACCTGTGGACAAGGGAAGCCCCACTGA...AGAGATACACTGCTGGCCACAAGTGTCCCCTCTCAGTCCCACCTTTTCGGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp GCTGTGGCTTTGGGGATCAGAACTTCCCAGCTAGGGCTCCCACTGTTGGACTCATCAGTGGGGCTTCCCTaGTCCACAGGTTATTTAGAA +
Preference number: 5 (lower is better)
Translates to: AVALGIRTSQLGLPLLDSSVGLP*STGYLE
Trigger: TTCTAAATAACCTGTGGACAAGGGAAGCCCCACTGA...TGAGTCCAACAGTGGGAGCCCTAGCTGGGAAGTTCTGATCCCCAAAGCCACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS TCA 90 bp TTCTTGGTCCCGTACATGACTTCCATGAACTTCTCATCGGCGTCCTaGAAGCGCTGGTCAAGGAAGGAGCTTGTTTTCCGCACCAGGTTC +
Preference number: 5 (lower is better)
Translates to: FLVPYMTSMNFSSAS*KRWSRKELVFRTRF
Trigger: GAACCTGGTGCGGAAAACAAGCTCCTTCCTTGACCAGCGCTTTCAGGACGCCGATGAGAAGTTCATGGAAGTCATGTACGGGACCAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000264205.10
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
ENST00000436918.6
ENST00000526194.5
ENST00000528294.1
ENST00000649812.1
CDS TCA 90 bp AGGTGTCACCTCCCAGCTGGGTTTAAGGGGCTGAGTTGTCCACTCTaGTCTTCTCCAAGCACAAACTGCAAAGCAGACCAGAAAGCAGCT +
Preference number: 5 (lower is better)
Translates to: RCHLPAGFKGLSCPL*SSPSTNCKADQKAA
Trigger: AGCTGCTTTCTGGTCTGCTTTGCAGTTTGTGCTTGGAGAAGATCAGAGTGGACAACTCAGCCCCTTAAACCCAGCTGGGAGGTGACACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481130.6
CDS TCA 90 bp ATGAGGACCCCAGAACCAGCTCCTCCCATCCTATTCTGCGGAAAATaGAATGAAGGCTCCAAATCCCAAAGCAGTGGAGCGGAGACAAGG +
Preference number: 5 (lower is better)
Translates to: MRTPEPAPPILFCGK*NEGSKSQSSGAETR
Trigger: CCTTGTCTCCGCTCCACTGCTTTGGGATTTGGAGCCTTCATTTCATTTTCCGCAGAATAGGATGGGAGGAGCTGGTTCTGGGGTCCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526194.5
CDS-3UTR CAA 90 bp GTTCCCAGATGGTGTTTGAGGGTCCTGACCCGACCTCATTCTGCTATAGCCATCAACGCAAAGCCCAGGTaGTTTTCTGTGTCACTCACG +
Preference number: 5 (lower is better)
Translates to: VPRWCLRVLTRPHSAIAINAKPR*FSVSLT
Trigger: CGTGAGTGACACAGAAAACAACCTGGGCTTTGCGTT...GATGGCTATAGCAGAATGAGGTCGGGTCAGGACCCTCAAACACCATCTGGGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp GCTGTGGCTTTGGGGATCAGAACTTCCCAGCTAGGGCTCCCACTGTTGGACTCAGGATCCATGATGAAGTaGGGGTATCCTATCATGTTG +
Preference number: 5 (lower is better)
Translates to: AVALGIRTSQLGLPLLDSGSMMK*GYPIML
Trigger: CAACATGATAGGATACCCCAACTTCATCATGGATCC...TGAGTCCAACAGTGGGAGCCCTAGCTGGGAAGTTCTGATCCCCAAAGCCACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp TGGATGACGGTGCTCAGAGAGAGGATTTGGGTCCTGCGGGAGGTGACAGCTGTTGTCATACTCCCGTCCTaGATCATCAAAAGCATGAGT +
Preference number: 5 (lower is better)
Translates to: WMTVLRERIWVLREVTAVVILPS*IIKSMS
Trigger: ACTCATGCTTTTGATGATCAAGGACGGGAGTATGAC...AACAGCTGTCACCTCCCGCAGGACCCAAATCCTCTCTCTGAGCACCGTCATCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp GAGTGGGGAAGAGAGGGAGTAAATCAGTGGGGCTTCCCTTGTCCACAGGTTATTTGTTCTGAGAACTCCTaGGAATTGGAGAGGGAGCCG +
Preference number: 5 (lower is better)
Translates to: EWGREGVNQWGFPCPQVICSENS*ELEREP
Trigger: CGGCTCCCTCTCCAATTCCAAGGAGTTCTCAGAACA...AATAACCTGTGGACAAGGGAAGCCCCACTGATTTACTCCCTCTCTTCCCCACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS TCA 90 bp ATCCTTACGACTTCAGGTGTCACCTCCCAGCTGGGTTTAAGGGGCTaGGTTGTCCACTCTGATCTTCTCCAAGCACAAACTGCAAAGCAG +
Preference number: 5 (lower is better)
Translates to: ILTTSGVTSQLGLRG*VVHSDLLQAQTAKQ
Trigger: CTGCTTTGCAGTTTGTGCTTGGAGAAGATCAGAGTGGACAACTCAGCCCCTTAAACCCAGCTGGGAGGTGACACCTGAAGTCGTAAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481130.6
CDS-3UTR CAA 90 bp ATCTTGAAAGCATTTGACACAGTGGTATTTGTGGCGTATCTGGCGCTTGTCAGTAGACTGCGGGTCACGTaGAGAGCCAACACCATGGGC +
Preference number: 5 (lower is better)
Translates to: ILKAFDTVVFVAYLALVSRLRVT*RANTMG
Trigger: GCCCATGGTGTTGGCTCTCAACGTGACCCGCAGTCT...ACTGACAAGCGCCAGATACGCCACAAATACCACTGTGTCAAATGCTTTCAAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS GCA 90 bp GGTTTCCTCATCCATCCACTTCAGGGTGCTCAGGCTTTCCTCAAATaGCTTCTTAATCTCCAGGATGATCTCGGTGGCTATGCTCTTGCT +
Preference number: 5 (lower is better)
Translates to: GFLIHPLQGAQAFLK*LLNLQDDLGGYALA
Trigger: AGCAAGAGCATAGCCACCGAGATCATCCTGGAGATTAAGAAGGCATTTGAGGAAAGCCTGAGCACCCTGAAGTGGATGGATGAGGAAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000264205.10
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
ENST00000436918.6
ENST00000470394.1
ENST00000526194.5
ENST00000649812.1
CDS-3UTR CAA 90 bp GTTCCCAGATGGTGTTTGAGGGTCCTGACCCGACCTCATTCTGCTATAGCCATCTTTTCGAGGAGGTGCTaGATGATTGCTTGGTTGTGT +
Preference number: 5 (lower is better)
Translates to: VPRWCLRVLTRPHSAIAIFSRRC*MIAWLC
Trigger: ACACAACCAAGCAATCATCAAGCACCTCCTCGAAAA...GATGGCTATAGCAGAATGAGGTCGGGTCAGGACCCTCAAACACCATCTGGGAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp AAGCATTTGACACAGTGGTATTTGTGGCGTATCTGGCGCTTGTCAGTGTGGGGCACTTTGTCCAGCTCCTaGGGATCCATGATGAAGTTG +
Preference number: 5 (lower is better)
Translates to: KHLTQWYLWRIWRLSVWGTLSSS*GSMMKL
Trigger: CAACTTCATCATGGATCCCAAGGAGCTGGACAAAGT...GCCCCACACTGACAAGCGCCAGATACGCCACAAATACCACTGTGTCAAATGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp GAGTGGGGAAGAGAGGGAGTAAATCAGTGGGGCTTCCCTTGTCCACAGGTTATTACTTTGTCCAGCTCCTaGGGATCCATGATGAAGTTG +
Preference number: 5 (lower is better)
Translates to: EWGREGVNQWGFPCPQVITLSSS*GSMMKL
Trigger: CAACTTCATCATGGATCCCAAGGAGCTGGACAAAGT...AATAACCTGTGGACAAGGGAAGCCCCACTGATTTACTCCCTCTCTTCCCCACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS CCA 90 bp AGCTGGGCCATACTTCTTTTGCCCTTGGTTTCTTCATCTGAAAAGTaGGATAACAAGGGCATCCACTCTTCAGACGGCTCTCGTGATAGC +
Preference number: 5 (lower is better)
Translates to: SWAILLLPLVSSSEK*DNKGIHSSDGSRDS
Trigger: GCTATCACGAGAGCCGTCTGAAGAGTGGATGCCCTTGTTATCCCACTTTTCAGATGAAGAAACCAAGGGCAAAAGAAGTATGGCCCAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526194.5
CDS-3UTR CAA 90 bp ATCTTGAAAGCATTTGACACAGTGGTATTTGTGGCGTATCTGGCGCTTGTCAGTACACAGAGGGGGATCTaGTCTGGTACTGGATGCCCA +
Preference number: 5 (lower is better)
Translates to: ILKAFDTVVFVAYLALVSTQRGI*SGTGCP
Trigger: TGGGCATCCAGTACCAGACAAGATCCCCCTCTGTGT...ACTGACAAGCGCCAGATACGCCACAAATACCACTGTGTCAAATGCTTTCAAGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp ATCTTGAAAGCATTTGACACAGTGGTATTTGTGGCGTATCTGGCGCTTGTCAGTGGTCAAGGAAGGAGCTaGTTTTCCGCACCAGGTTCC +
Preference number: 5 (lower is better)
Translates to: ILKAFDTVVFVAYLALVSGQGRS*FSAPGS
Trigger: GGAACCTGGTGCGGAAAACAAGCTCCTTCCTTGACC...ACTGACAAGCGCCAGATACGCCACAAATACCACTGTGTCAAATGCTTTCAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp ATCTTGAAAGCATTTGACACAGTGGTATTTGTGGCGTATCTGGCGCTTGTCAGTAGGCAGCTGTCTGATTaGGAGACTTGCTCTGTGGCC +
Preference number: 5 (lower is better)
Translates to: ILKAFDTVVFVAYLALVSRQLSD*ETCSVA
Trigger: GGCCACAGAGCAAGTCTCCAAATCAGACAGCTGCCT...ACTGACAAGCGCCAGATACGCCACAAATACCACTGTGTCAAATGCTTTCAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp ATCTTGAAAGCATTTGACACAGTGGTATTTGTGGCGTATCTGGCGCTTGTCAGTTCCACCTGGATCACGTaGCTGTTGGAGTTCTTGGAA +
Preference number: 5 (lower is better)
Translates to: ILKAFDTVVFVAYLALVSSTWIT*LLEFLE
Trigger: TTCCAAGAACTCCAACAGCAACGTGATCCAGGTGGA...ACTGACAAGCGCCAGATACGCCACAAATACCACTGTGTCAAATGCTTTCAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS-3UTR CAA 90 bp ATCTTGAAAGCATTTGACACAGTGGTATTTGTGGCGTATCTGGCGCTTGTCAGTGTCATACTCCCGTCCTaGATCATCAAAAGCATGAGT +
Preference number: 5 (lower is better)
Translates to: ILKAFDTVVFVAYLALVSVILPS*IIKSMS
Trigger: ACTCATGCTTTTGATGATCAAGGACGGGAGTATGAC...ACTGACAAGCGCCAGATACGCCACAAATACCACTGTGTCAAATGCTTTCAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
CDS GCA 72 bp TCCCTGCTCCCAGCCCAGCTGCTCGGACGGCTCGGCTaGCTGGCCCAGGCGGCGCGCTCAGCTCCAGCGGGC +
Preference number: 6 (lower is better)
Translates to: SLLPAQLLGRLG*LAQAARSAPAG
Trigger: GCCCGCTGGAGCTGAGCGCGCCGCCTGGGCCAGGCAGCCGAGCCGTCCGAGCAGCTGGGCTGGGAGCAGGGA
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649812.1
CDS CCA 72 bp TGCTCCCAGCCCAGCTGCTCGGACGGCTCGGCTGCCTaGCCCAGGCGGCGCGCTCAGCTCCAGCGGGCGAGC +
Preference number: 6 (lower is better)
Translates to: CSQPSCSDGSAA*PRRRAQLQRAS
Trigger: GCTCGCCCGCTGGAGCTGAGCGCGCCGCCTGGGCCAGGCAGCCGAGCCGTCCGAGCAGCTGGGCTGGGAGCA
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649812.1
CDS CCA 72 bp AGGCCAAATGCAGCACGGACTCCCTCAGCGCCTCCATaGCTCTCGCGCCCGAATGGGGAAGCGGCCCCGACC +
Preference number: 6 (lower is better)
Translates to: RPNAARTPSAPP*LSRPNGEAAPT
Trigger: GGTCGGGGCCGCTTCCCCATTCGGGCGCGAGAGCCATGGAGGCGCTGAGGGAGTCCGTGCTGCATTTGGCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000264205.10
CDS CAA 72 bp GAGTCCACCAGGTCCTCCTCGTCCAGCGTGGCCCGCTaGTACGTCGACATCCCCAGCGCCGACAGCAGGGCG +
Preference number: 6 (lower is better)
Translates to: ESTRSSSSSVAR*YVDIPSADSRA
Trigger: CGCCCTGCTGTCGGCGCTGGGGATGTCGACGTACAAGCGGGCCACGCTGGACGAGGAGGACCTGGTGGACTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000436918.6
ENST00000526194.5
CDS CAA 90 bp TCGGAGAGCGAGTCCACCAGGTCCTCCTCGTCCAGCGTGGCCCGCTaGTACGTCGACATCATAGCTCGCGTGCTCCGCCCCGGCTTCGCG +
Preference number: 6 (lower is better)
Translates to: SESESTRSSSSSVAR*YVDIIARVLRPGFA
Trigger: CGCGAAGCCGGGGCGGAGCACGCGAGCTATGATGTCGACGTACAAGCGGGCCACGCTGGACGAGGAGGACCTGGTGGACTCGCTCTCCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415912.6
ENST00000649812.1
CDS CCA 72 bp GCCAGTGCCGTCTCAAAGTCCAAGATCTGCTGCATCTaGGGCCGGATGGCCTCCTCGTCCCCGCCGCCCAGC +
Preference number: 6 (lower is better)
Translates to: ASAVSKSKICCI*GRMASSSPPPS
Trigger: GCTGGGCGGCGGGGACGAGGAGGCCATCCGGCCCCAGATGCAGCAGATCTTGGACTTTGAGACGGCACTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000264205.10
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
ENST00000436918.6
ENST00000526194.5
ENST00000528294.1
ENST00000649812.1
CDS CCA 72 bp CGGAGAGCGAGTCCACCAGGTCCTCCTCGTCCAGCGTaGCCCGCTTGTACGTCGACATCCCCAGCGCCGACA +
Preference number: 6 (lower is better)
Translates to: RRASPPGPPRPA*PACTSTSPAPT
Trigger: TGTCGGCGCTGGGGATGTCGACGTACAAGCGGGCCACGCTGGACGAGGAGGACCTGGTGGACTCGCTCTCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000374893.11
ENST00000436918.6
ENST00000526194.5
CDS CCA 72 bp CGGAGAGCGAGTCCACCAGGTCCTCCTCGTCCAGCGTaGCCCGCTTGTACGTCGACATCTCAGTGTCCCGGG +
Preference number: 6 (lower is better)
Translates to: RRASPPGPPRPA*PACTSTSQCPG
Trigger: CCCGGGACACTGAGATGTCGACGTACAAGCGGGCCACGCTGGACGAGGAGGACCTGGTGGACTCGCTCTCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463334.2
CDS CAA 72 bp GAGTCCACCAGGTCCTCCTCGTCCAGCGTGGCCCGCTaGTACGTCGACATCATAGCTCGCGTGCTCCGCCCC +
Preference number: 6 (lower is better)
Translates to: ESTRSSSSSVAR*YVDIIARVLRP
Trigger: GGGGCGGAGCACGCGAGCTATGATGTCGACGTACAAGCGGGCCACGCTGGACGAGGAGGACCTGGTGGACTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415912.6
ENST00000649812.1
CDS GCA 72 bp TCGACATCTCAGTGTCCCGGGACGCTCAGGTCCAGCTaGATCCAGGCACCTCGAAATCGCCGCCACCCGCGA +
Preference number: 6 (lower is better)
Translates to: STSQCPGTLRSS*IQAPRNRRHPR
Trigger: TCGCGGGTGGCGGCGATTTCGAGGTGCCTGGATGCAGCTGGACCTGAGCGTCCCGGGACACTGAGATGTCGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463334.2
CDS CCA 72 bp GAGAGGGAGCCGATGACCCGGAAGCGAGAGGGGCTGTaGGGATCGGTGATGAGGCCTTCGTGGGAGCTCTCA +
Preference number: 6 (lower is better)
Translates to: EREPMTRKREGL*GSVMRPSWELS
Trigger: TGAGAGCTCCCACGAAGGCCTCATCACCGATCCCCACAGCCCCTCTCGCTTCCGGGTCATCGGCTCCCTCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000264205.10
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
ENST00000436918.6
ENST00000531334.1
ENST00000649812.1
CDS CCA 72 bp CGGAGAGCGAGTCCACCAGGTCCTCCTCGTCCAGCGTaGCCCGCTTGTACGTCGACATCTGGGTCCTGGACT +
Preference number: 6 (lower is better)
Translates to: RRASPPGPPRPA*PACTSTSGSWT
Trigger: AGTCCAGGACCCAGATGTCGACGTACAAGCGGGCCACGCTGGACGAGGAGGACCTGGTGGACTCGCTCTCCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527991.2
CDS CAA 72 bp GAGTCCACCAGGTCCTCCTCGTCCAGCGTGGCCCGCTaGTACGTCGACATCTCAGTGTCCCGGGACGCTCAG +
Preference number: 6 (lower is better)
Translates to: ESTRSSSSSVAR*YVDISVSRDAQ
Trigger: CTGAGCGTCCCGGGACACTGAGATGTCGACGTACAAGCGGGCCACGCTGGACGAGGAGGACCTGGTGGACTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463334.2
CDS GCA 72 bp TCCTCGTCCAGCGTGGCCCGCTTGTACGTCGACATCTaGAAGGCCAAATGCAGCACGGACTCCCTCAGCGCC +
Preference number: 6 (lower is better)
Translates to: SSSSVARLYVDI*KAKCSTDSLSA
Trigger: GGCGCTGAGGGAGTCCGTGCTGCATTTGGCCTTGCAGATGTCGACGTACAAGCGGGCCACGCTGGACGAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264205.10
CDS GCA 72 bp CTGGATGCCCAGTGCTGCCAAGCAGGCCACCAGTCCTaGCGCCAGAAGTACCACCAACACCACCAGCCGCTT +
Preference number: 6 (lower is better)
Translates to: LDAQCCQAGHQS*RQKYHQHHQPL
Trigger: AAGCGGCTGGTGGTGTTGGTGGTACTTCTGGCGGCAGGACTGGTGGCCTGCTTGGCAGCACTGGGCATCCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000264205.10
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
ENST00000436918.6
ENST00000463334.2
ENST00000473505.5
ENST00000481130.6
ENST00000526194.5
ENST00000527991.2
ENST00000649812.1
CDS GCA 72 bp ATGTTGGCCAGTGCCGTCTCAAAGTCCAAGATCTGCTaGATCTGGGGCCGGATGGCCTCCTCGTCCCCGCCG +
Preference number: 6 (lower is better)
Translates to: MLASAVSKSKIC*IWGRMASSSPP
Trigger: CGGCGGGGACGAGGAGGCCATCCGGCCCCAGATGCAGCAGATCTTGGACTTTGAGACGGCACTGGCCAACAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264205.10
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
ENST00000436918.6
ENST00000526194.5
ENST00000528294.1
ENST00000649812.1
CDS GCA 72 bp GGCTCCAAATCCCAAAGCAGTGGAGCGGAGACAAGGTaGCAGATCGGCTCCGCTCCAGAGGCCAGGCTCACC +
Preference number: 6 (lower is better)
Translates to: GSKSQSSGAETR*QIGSAPEARLT
Trigger: GGTGAGCCTGGCCTCTGGAGCGGAGCCGATCTGGCACCTTGTCTCCGCTCCACTGCTTTGGGATTTGGAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526194.5
CDS CAA 72 bp GAGTCCACCAGGTCCTCCTCGTCCAGCGTGGCCCGCTaGTACGTCGACATCTGGGTCCTGGACTCTTGGTCC +
Preference number: 6 (lower is better)
Translates to: ESTRSSSSSVAR*YVDIWVLDSWS
Trigger: GGACCAAGAGTCCAGGACCCAGATGTCGACGTACAAGCGGGCCACGCTGGACGAGGAGGACCTGGTGGACTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527991.2
CDS CAA 90 bp TCGGAGAGCGAGTCCACCAGGTCCTCCTCGTCCAGCGTGGCCCGCTaGTACGTCGACATCTGCAAGGCCAAATGCAGCACGGACTCCCTC +
Preference number: 6 (lower is better)
Translates to: SESESTRSSSSSVAR*YVDICKAKCSTDSL
Trigger: GAGGGAGTCCGTGCTGCATTTGGCCTTGCAGATGTCGACGTACAAGCGGGCCACGCTGGACGAGGAGGACCTGGTGGACTCGCTCTCCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264205.10
CDS CAA 90 bp TCGGAGAGCGAGTCCACCAGGTCCTCCTCGTCCAGCGTGGCCCGCTaGTACGTCGACATCTGGGTCCTGGACTCTTGGTCCTGTGCTCCT +
Preference number: 6 (lower is better)
Translates to: SESESTRSSSSSVAR*YVDIWVLDSWSCAP
Trigger: AGGAGCACAGGACCAAGAGTCCAGGACCCAGATGTCGACGTACAAGCGGGCCACGCTGGACGAGGAGGACCTGGTGGACTCGCTCTCCGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527991.2
CDS TCA 72 bp CTCTCTCCGCTTCGTCCTTACCAGACTTCGCACTTGTaGGGCGGGTTCATGGGTGAGCCAGGTGGGCAGCGG +
Preference number: 6 (lower is better)
Translates to: LSPLRPYQTSHL*GGFMGEPGGQR
Trigger: CCGCTGCCCACCTGGCTCACCCATGAACCCGCCTCACAAGTGCGAAGTCTGGTAAGGACGAAGCGGAGAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264205.10
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
ENST00000436918.6
ENST00000531334.1
CDS GCA 72 bp GTGGCCCGCTTGTACGTCGACATCTGCAAGGCCAAATaGAGCACGGACTCCCTCAGCGCCTCCATGGCTCTC +
Preference number: 6 (lower is better)
Translates to: VARLYVDICKAK*STDSLSASMAL
Trigger: GAGAGCCATGGAGGCGCTGAGGGAGTCCGTGCTGCATTTGGCCTTGCAGATGTCGACGTACAAGCGGGCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264205.10
CDS GCA 72 bp TCAGGCACACAGAGGGGGATCTTGTCTGGTACTGGATaGCCAGTGCTGCCAAGCAGGCCACCAGTCCTGCCG +
Preference number: 6 (lower is better)
Translates to: SGTQRGILSGTG*PVLPSRPPVLP
Trigger: CGGCAGGACTGGTGGCCTGCTTGGCAGCACTGGGCATCCAGTACCAGACAAGATCCCCCTCTGTGTGCCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000264205.10
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
ENST00000436918.6
ENST00000463334.2
ENST00000473505.5
ENST00000481130.6
ENST00000526194.5
ENST00000527991.2
ENST00000649812.1
CDS GCA 72 bp GCCGCCCGTTCACCGGCTCCCCGTTCACGCTGTAGTTaGTGTACTGCTCTACCATGCACTCGGTCTGACGCT +
Preference number: 6 (lower is better)
Translates to: AARSPAPRSRCS*CTALPCTRSDA
Trigger: AGCGTCAGACCGAGTGCATGGTAGAGCAGTACAGCAACTACAGCGTGAACGGGGAGCCGGTGAACGGGCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264205.10
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
ENST00000436918.6
ENST00000649812.1
CDS CCA 72 bp CGGAGAGCGAGTCCACCAGGTCCTCCTCGTCCAGCGTaGCCCGCTTGTACGTCGACATCTGCAAGGCCAAAT +
Preference number: 6 (lower is better)
Translates to: RRASPPGPPRPA*PACTSTSARPN
Trigger: ATTTGGCCTTGCAGATGTCGACGTACAAGCGGGCCACGCTGGACGAGGAGGACCTGGTGGACTCGCTCTCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264205.10
CDS CCA 72 bp TGTTCCCAGAGGTTGCTGAAGGTCCCCCAGCGTGAGTaGCCATCAGGGACTGGGTTGGCCTTGATCCAGCCC +
Preference number: 6 (lower is better)
Translates to: CSQRLLKVPQRE*PSGTGLALIQP
Trigger: GGGCTGGATCAAGGCCAACCCAGTCCCTGATGGCCACTCACGCTGGGGGACCTTCAGCAACCTCTGGGAACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000264205.10
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
ENST00000436918.6
ENST00000473505.5
ENST00000526194.5
ENST00000649812.1
CDS CCA 72 bp CGGAGAGCGAGTCCACCAGGTCCTCCTCGTCCAGCGTaGCCCGCTTGTACGTCGACATCTGCTCCATCCTTA +
Preference number: 6 (lower is better)
Translates to: RRASPPGPPRPA*PACTSTSAPSL
Trigger: TAAGGATGGAGCAGATGTCGACGTACAAGCGGGCCACGCTGGACGAGGAGGACCTGGTGGACTCGCTCTCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000481130.6
CDS CAA 72 bp GAGTCCACCAGGTCCTCCTCGTCCAGCGTGGCCCGCTaGTACGTCGACATCTGCAAGGCCAAATGCAGCACG +
Preference number: 6 (lower is better)
Translates to: ESTRSSSSSVAR*YVDICKAKCST
Trigger: CGTGCTGCATTTGGCCTTGCAGATGTCGACGTACAAGCGGGCCACGCTGGACGAGGAGGACCTGGTGGACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000264205.10
CDS TCA 72 bp GACCCAGCCCGGCTGCCCTGGGTCTCCAAGCCAAGCTaGGTCCAGGGACTTCAGAACAACCCAAAACAGACC +
Preference number: 6 (lower is better)
Translates to: DPARLPWVSKPS*VQGLQNNPKQT
Trigger: GGTCTGTTTTGGGTTGTTCTGAAGTCCCTGGACTCAGCTTGGCTTGGAGACCCAGGGCAGCCGGGCTGGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463334.2
CDS GCA 72 bp AGAGGGGGATCTTGTCTGGTACTGGATGCCCAGTGCTaGCAAGCAGGCCACCAGTCCTGCCGCCAGAAGTAC +
Preference number: 6 (lower is better)
Translates to: RGGSCLVLDAQC*QAGHQSCRQKY
Trigger: GTACTTCTGGCGGCAGGACTGGTGGCCTGCTTGGCAGCACTGGGCATCCAGTACCAGACAAGATCCCCCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000264205.10
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
ENST00000436918.6
ENST00000463334.2
ENST00000473505.5
ENST00000481130.6
ENST00000526194.5
ENST00000527991.2
ENST00000649812.1
CDS CCA 72 bp CCCTGGCTTCTCACCACCCAGCTGAATGGGGACAGCTaGGATTGGAACCCAAAGCTGTTGATGCCCGAGCCC +
Preference number: 6 (lower is better)
Translates to: PWLLTTQLNGDS*DWNPKLLMPEP
Trigger: GGGCTCGGGCATCAACAGCTTTGGGTTCCAATCCCAGCTGTCCCCATTCAGCTGGGTGGTGAGAAGCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473505.5
CDS CCA 72 bp TCCTCGTCCAGCGTGGCCCGCTTGTACGTCGACATCTaGGTCCTGGACTCTTGGTCCTGTGCTCCTTGTGGA +
Preference number: 6 (lower is better)
Translates to: SSSSVARLYVDI*VLDSWSCAPCG
Trigger: TCCACAAGGAGCACAGGACCAAGAGTCCAGGACCCAGATGTCGACGTACAAGCGGGCCACGCTGGACGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527991.2
CDS CCA 72 bp CTGGGCTGCAGACTTCGCACTTGTGAGGCGGGTTCATaGGTGAGCCAGGTGGGCAGCGGAAGTGTTCTGAGA +
Preference number: 6 (lower is better)
Translates to: LGCRLRTCEAGS*VSQVGSGSVLR
Trigger: TCTCAGAACACTTCCGCTGCCCACCTGGCTCACCCATGAACCCGCCTCACAAGTGCGAAGTCTGCAGCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000649812.1
CDS CAA 90 bp TTCATGGGTGAGCCAGGTGGGCAGCGGAAGTGTTCTGAGAACTCCTaGGAATTGGAGAGGGAGCCGATGACCCGGAAGCGAGAGGGGCTG +
Preference number: 6 (lower is better)
Translates to: FMGEPGGQRKCSENS*ELEREPMTRKREGL
Trigger: CAGCCCCTCTCGCTTCCGGGTCATCGGCTCCCTCTCCAATTCCAAGGAGTTCTCAGAACACTTCCGCTGCCCACCTGGCTCACCCATGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000264205.10
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
ENST00000436918.6
ENST00000531334.1
ENST00000649812.1
CDS TCA 72 bp AGGTCTGCAGCTCGGCTGCCGTCACTTTGTGGTAGATaGGCTCCTCATCACGGCGCTTCTCCTGTGGGATGG +
Preference number: 6 (lower is better)
Translates to: RSAARLPSLCGR*APHHGASPVGW
Trigger: CCATCCCACAGGAGAAGCGCCGTGATGAGGAGCTCATCTACCACAAAGTGACGGCAGCCGAGCTGCAGACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000264205.10
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
ENST00000436918.6
ENST00000526194.5
ENST00000528294.1
ENST00000649812.1
CDS TCA 72 bp CATGCACTCGGTCTGACGCTTGAAGGCCTCCACGGATaGGTTCTTCCACCATGGCCGGAGGTTCCCGTCCTT +
Preference number: 6 (lower is better)
Translates to: HALGLTLEGLHG*VLPPWPEVPVL
Trigger: AAGGACGGGAACCTCCGGCCATGGTGGAAGAACTCATCCGTGGAGGCCTTCAAGCGTCAGACCGAGTGCATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264205.10
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
ENST00000436918.6
ENST00000649812.1
CDS CCA 72 bp CCAGCGTGGCCCGCTTGTACGTCGACATCTGGGTCCTaGACTCTTGGTCCTGTGCTCCTTGTGGAAGATGGA +
Preference number: 6 (lower is better)
Translates to: PAWPACTSTSGS*TLGPVLLVEDG
Trigger: TCCATCTTCCACAAGGAGCACAGGACCAAGAGTCCAGGACCCAGATGTCGACGTACAAGCGGGCCACGCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527991.2
CDS CAA 72 bp GAGCCAGGTGGGCAGCGGAAGTGTTCTGAGAACTCCTaGGAATTGGAGAGGGAGCCGATGACCCGGAAGCGA +
Preference number: 6 (lower is better)
Translates to: EPGGQRKCSENS*ELEREPMTRKR
Trigger: TCGCTTCCGGGTCATCGGCTCCCTCTCCAATTCCAAGGAGTTCTCAGAACACTTCCGCTGCCCACCTGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264205.10
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
ENST00000436918.6
ENST00000531334.1
ENST00000649812.1
CDS CAA 72 bp GCTTCTCACCACCCAGCTGAATGGGGACAGCTGGGATaGGAACCCAAAGCTGTTGATGCCCGAGCCCACCAG +
Preference number: 6 (lower is better)
Translates to: ASHHPAEWGQLG*EPKAVDARAHQ
Trigger: CTGGTGGGCTCGGGCATCAACAGCTTTGGGTTCCAATCCCAGCTGTCCCCATTCAGCTGGGTGGTGAGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473505.5
CDS CAA 90 bp ACCACCCAGCTGAATGGGGACAGCTGGGATTGGAACCCAAAGCTGTaGATGCCCGAGCCCACCAGTGGATCAGAGGTGGATCCTGGGAGA +
Preference number: 6 (lower is better)
Translates to: TTQLNGDSWDWNPKL*MPEPTSGSEVDPGR
Trigger: TCTCCCAGGATCCACCTCTGATCCACTGGTGGGCTCGGGCATCAACAGCTTTGGGTTCCAATCCCAGCTGTCCCCATTCAGCTGGGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473505.5
CDS CAA 90 bp ACGCTGGCCGTGGAGTTTTCGAGGAGGTGCTTGATGATTGCTTGGTaGTGTTCCCAGAGGTTGCTGAAGGTCCCCCAGCGTGAGTGGCCA +
Preference number: 6 (lower is better)
Translates to: TLAVEFSRRCLMIAW*CSQRLLKVPQREWP
Trigger: TGGCCACTCACGCTGGGGGACCTTCAGCAACCTCTGGGAACACAACCAAGCAATCATCAAGCACCTCCTCGAAAACTCCACGGCCAGCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000264205.10
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
ENST00000436918.6
ENST00000473505.5
ENST00000526194.5
ENST00000649812.1
CDS CAA 90 bp GAGCTCCTCGATCCTGGTCTCGTTCATGCACGCACGGTAGTATACTaGCGCCTTTCTCTCTGCCTCGCTCACGCTGGCCGTGGAGTTTTC +
Preference number: 6 (lower is better)
Translates to: ELLDPGLVHARTVVY*RLSLCLAHAGRGVF
Trigger: GAAAACTCCACGGCCAGCGTGAGCGAGGCAGAGAGAAAGGCGCAAGTATACTACCGTGCGTGCATGAACGAGACCAGGATCGAGGAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000264205.10
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
ENST00000436918.6
ENST00000526194.5
ENST00000649812.1
CDS CAA 90 bp GTGATGTTCCAGCCCCCGAGCCTCTCAATCAACTCCATTAGAGGTTaGGCCCTGAGCTCCTCGATCCTGGTCTCGTTCATGCACGCACGG +
Preference number: 6 (lower is better)
Translates to: VMFQPPSLSINSIRG*ALSSSILVSFMHAR
Trigger: CCGTGCGTGCATGAACGAGACCAGGATCGAGGAGCTCAGGGCCAAACCTCTAATGGAGTTGATTGAGAGGCTCGGGGGCTGGAACATCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000264205.10
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
ENST00000436918.6
ENST00000526194.5
ENST00000649812.1
CDS TCA 72 bp TGTGGGGTCCATGGAGCTCAAGATGGAGCTGGTCACTaGGACACAAGCTTCGCTCAGGCACACAGAGGGGGA +
Preference number: 6 (lower is better)
Translates to: CGVHGAQDGAGH*DTSFAQAHRGG
Trigger: TCCCCCTCTGTGTGCCTGAGCGAAGCTTGTGTCTCAGTGACCAGCTCCATCTTGAGCTCCATGGACCCCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000264205.10
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
ENST00000436918.6
ENST00000463334.2
ENST00000473505.5
ENST00000481130.6
ENST00000526194.5
ENST00000527991.2
ENST00000649812.1
CDS GCA 72 bp CATGCACGCACGGTAGTATACTTGCGCCTTTCTCTCTaGCTCGCTCACGCTGGCCGTGGAGTTTTCGAGGAG +
Preference number: 6 (lower is better)
Translates to: HARTVVYLRLSL*LAHAGRGVFEE
Trigger: CTCCTCGAAAACTCCACGGCCAGCGTGAGCGAGGCAGAGAGAAAGGCGCAAGTATACTACCGTGCGTGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000264205.10
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
ENST00000436918.6
ENST00000473505.5
ENST00000526194.5
ENST00000649812.1
CDS CCA 72 bp GTCCTTACCAGACTTCGCACTTGTGAGGCGGGTTCATaGGTGAGCCAGGTGGGCAGCGGAAGTGTTCTGAGA +
Preference number: 6 (lower is better)
Translates to: VLTRLRTCEAGS*VSQVGSGSVLR
Trigger: TCTCAGAACACTTCCGCTGCCCACCTGGCTCACCCATGAACCCGCCTCACAAGTGCGAAGTCTGGTAAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264205.10
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
ENST00000436918.6
ENST00000531334.1
CDS CCA 72 bp CTTCTCACCACCCAGCTGAATGGGGACAGCTGGGATTaGAACCCAAAGCTGTTGATGCCCGAGCCCACCAGT +
Preference number: 6 (lower is better)
Translates to: LLTTQLNGDSWD*NPKLLMPEPTS
Trigger: ACTGGTGGGCTCGGGCATCAACAGCTTTGGGTTCCAATCCCAGCTGTCCCCATTCAGCTGGGTGGTGAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473505.5
CDS CAA 72 bp GATCCTGGTCTCGTTCATGCACGCACGGTAGTATACTaGCGCCTTTCTCTCTGCCTCGCTCACGCTGGCCGT +
Preference number: 6 (lower is better)
Translates to: DPGLVHARTVVY*RLSLCLAHAGR
Trigger: ACGGCCAGCGTGAGCGAGGCAGAGAGAAAGGCGCAAGTATACTACCGTGCGTGCATGAACGAGACCAGGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000264205.10
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
ENST00000436918.6
ENST00000473505.5
ENST00000526194.5
ENST00000649812.1
CDS TCA 72 bp TGCTGTACTGCTCTACCATGCACTCGGTCTGACGCTTaGAGGCCTCCACGGATGAGTTCTTCCACCATGGCC +
Preference number: 6 (lower is better)
Translates to: CCTALPCTRSDA*RPPRMSSSTMA
Trigger: GGCCATGGTGGAAGAACTCATCCGTGGAGGCCTTCAAGCGTCAGACCGAGTGCATGGTAGAGCAGTACAGCA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264205.10
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
ENST00000436918.6
ENST00000649812.1
CDS CCA 72 bp TTGGAACCCAAAGCTGTTGATGCCCGAGCCCACCAGTaGATCAGAGGTGGATCCTGGGAGATGTTGGCAGAG +
Preference number: 6 (lower is better)
Translates to: LEPKAVDARAHQ*IRGGSWEMLAE
Trigger: CTCTGCCAACATCTCCCAGGATCCACCTCTGATCCACTGGTGGGCTCGGGCATCAACAGCTTTGGGTTCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473505.5
CDS CCA 72 bp GCCCGCTTGTACGTCGACATCTGGGTCCTGGACTCTTaGTCCTGTGCTCCTTGTGGAAGATGGAACTGCTTC +
Preference number: 6 (lower is better)
Translates to: ARLYVDIWVLDS*SCAPCGRWNCF
Trigger: GAAGCAGTTCCATCTTCCACAAGGAGCACAGGACCAAGAGTCCAGGACCCAGATGTCGACGTACAAGCGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527991.2
CDS CAA 72 bp AGGTGCTTGATGATTGCTTGGTTGTGTTCCCAGAGGTaGCTGAAGGTCCCCCAGCGTGAGTGGCCATCAGGG +
Preference number: 6 (lower is better)
Translates to: RCLMIAWLCSQR*LKVPQREWPSG
Trigger: CCCTGATGGCCACTCACGCTGGGGGACCTTCAGCAACCTCTGGGAACACAACCAAGCAATCATCAAGCACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000264205.10
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
ENST00000436918.6
ENST00000473505.5
ENST00000526194.5
ENST00000649812.1
CDS CAA 72 bp CAGCCCCCGAGCCTCTCAATCAACTCCATTAGAGGTTaGGCCCTGAGCTCCTCGATCCTGGTCTCGTTCATG +
Preference number: 6 (lower is better)
Translates to: QPPSLSINSIRG*ALSSSILVSFM
Trigger: CATGAACGAGACCAGGATCGAGGAGCTCAGGGCCAAACCTCTAATGGAGTTGATTGAGAGGCTCGGGGGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000264205.10
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
ENST00000436918.6
ENST00000526194.5
ENST00000649812.1
CDS CAA 72 bp TCCTCATCACGGCGCTTCTCCTGTGGGATGGTGATGTaGGCCAGTGCCGTCTCAAAGTCCAAGATCTGCTGC +
Preference number: 6 (lower is better)
Translates to: SSSRRFSCGMVM*ASAVSKSKICC
Trigger: GCAGCAGATCTTGGACTTTGAGACGGCACTGGCCAACATCACCATCCCACAGGAGAAGCGCCGTGATGAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000264205.10
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
ENST00000436918.6
ENST00000526194.5
ENST00000528294.1
ENST00000649812.1
CDS CAA 72 bp GTGGCTATGCTCTTGCTGTCCTCGGCGAAGGTTGCTTaGACAAACATGGGGCCCAACGCAAAGCCCAGGTTG +
Preference number: 6 (lower is better)
Translates to: VAMLLLSSAKVA*TNMGPNAKPRL
Trigger: CAACCTGGGCTTTGCGTTGGGCCCCATGTTTGTCAAAGCAACCTTCGCCGAGGACAGCAAGAGCATAGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000264205.10
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
ENST00000436918.6
ENST00000470394.1
ENST00000526194.5
ENST00000649812.1
CDS CAA 72 bp CTGAATGGGGACAGCTGGGATTGGAACCCAAAGCTGTaGATGCCCGAGCCCACCAGTGGATCAGAGGTGGAT +
Preference number: 6 (lower is better)
Translates to: LNGDSWDWNPKL*MPEPTSGSEVD
Trigger: ATCCACCTCTGATCCACTGGTGGGCTCGGGCATCAACAGCTTTGGGTTCCAATCCCAGCTGTCCCCATTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473505.5
CDS CAA 72 bp TTGCAGTTGTGGGTGCCACGCCTGGCCCCGAGTGTGTaGGGGAAGGTAAAGAACCTCCACTTTGGTCTTCTC +
Preference number: 6 (lower is better)
Translates to: LQLWVPRLAPSV*GKVKNLHFGLL
Trigger: GAGAAGACCAAAGTGGAGGTTCTTTACCTTCCCCAACACACTCGGGGCCAGGCGTGGCACCCACAACTGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527991.2
CDS CAA 90 bp TTTTCGAGGAGGTGCTTGATGATTGCTTGGTTGTGTTCCCAGAGGTaGCTGAAGGTCCCCCAGCGTGAGTGGCCATCAGGGACTGGGTTG +
Preference number: 6 (lower is better)
Translates to: FSRRCLMIAWLCSQR*LKVPQREWPSGTGL
Trigger: CAACCCAGTCCCTGATGGCCACTCACGCTGGGGGACCTTCAGCAACCTCTGGGAACACAACCAAGCAATCATCAAGCACCTCCTCGAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000264205.10
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
ENST00000436918.6
ENST00000473505.5
ENST00000526194.5
ENST00000649812.1
CDS TCA 72 bp CGAGCCTCTCAATCAACTCCATTAGAGGTTTGGCCCTaGGCTCCTCGATCCTGGTCTCGTTCATGCACGCAC +
Preference number: 6 (lower is better)
Translates to: RASQSTPLEVWP*APRSWSRSCTH
Trigger: GTGCGTGCATGAACGAGACCAGGATCGAGGAGCTCAGGGCCAAACCTCTAATGGAGTTGATTGAGAGGCTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264205.10
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
ENST00000436918.6
ENST00000526194.5
ENST00000649812.1
CDS TCA 72 bp TGGCTATGCTCTTGCTGTCCTCGGCGAAGGTTGCTTTaGCAAACATGGGGCCCAACGCAAAGCCCAGGTTGT +
Preference number: 6 (lower is better)
Translates to: WLCSCCPRRRLL*QTWGPTQSPGC
Trigger: ACAACCTGGGCTTTGCGTTGGGCCCCATGTTTGTCAAAGCAACCTTCGCCGAGGACAGCAAGAGCATAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000264205.10
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
ENST00000436918.6
ENST00000470394.1
ENST00000526194.5
ENST00000649812.1
CDS GCA 72 bp GCTGGCCGTGGAGTTTTCGAGGAGGTGCTTGATGATTaGTTGGTTGTGTTCCCAGAGGTTGCTGAAGGTCCC +
Preference number: 6 (lower is better)
Translates to: AGRGVFEEVLDD*LVVFPEVAEGP
Trigger: GGGACCTTCAGCAACCTCTGGGAACACAACCAAGCAATCATCAAGCACCTCCTCGAAAACTCCACGGCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000264205.10
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
ENST00000436918.6
ENST00000473505.5
ENST00000526194.5
ENST00000649812.1
CDS CCA 72 bp AGAGGTGAGACCCTGGCTTCTCACCACCCAGCTGAATaGGGACAGCTGGGATTGGAACCCAAAGCTGTTGAT +
Preference number: 6 (lower is better)
Translates to: RGETLASHHPAE*GQLGLEPKAVD
Trigger: ATCAACAGCTTTGGGTTCCAATCCCAGCTGTCCCCATTCAGCTGGGTGGTGAGAAGCCAGGGTCTCACCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473505.5
CDS CAA 72 bp TCGCTCACGCTGGCCGTGGAGTTTTCGAGGAGGTGCTaGATGATTGCTTGGTTGTGTTCCCAGAGGTTGCTG +
Preference number: 6 (lower is better)
Translates to: SLTLAVEFSRRC*MIAWLCSQRLL
Trigger: CAGCAACCTCTGGGAACACAACCAAGCAATCATCAAGCACCTCCTCGAAAACTCCACGGCCAGCGTGAGCGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000264205.10
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
ENST00000436918.6
ENST00000473505.5
ENST00000526194.5
ENST00000649812.1
CDS CAA 72 bp CGACATCTGGGTCCTGGACTCTTGGTCCTGTGCTCCTaGTGGAAGATGGAACTGCTTCTTCAGGTGGGAACC +
Preference number: 6 (lower is better)
Translates to: RHLGPGLLVLCS*WKMELLLQVGT
Trigger: GGTTCCCACCTGAAGAAGCAGTTCCATCTTCCACAAGGAGCACAGGACCAAGAGTCCAGGACCCAGATGTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527991.2
CDS GCA 72 bp AGATTCAGCCCTAATCCAGGAAAGGAACAGCCACCCTaGTCAGCTGCTCGGATCTGCTCCCAAACATCAGAG +
Preference number: 6 (lower is better)
Translates to: RFSPNPGKEQPP*SAARICSQTSE
Trigger: CTCTGATGTTTGGGAGCAGATCCGAGCAGCTGAGCAGGGTGGCTGTTCCTTTCCTGGATTAGGGCTGAATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357071.8
CDS CCA 72 bp GTCCTGGACTCTTGGTCCTGTGCTCCTTGTGGAAGATaGAACTGCTTCTTCAGGTGGGAACCTCACAGAGTC +
Preference number: 6 (lower is better)
Translates to: VLDSWSCAPCGR*NCFFRWEPHRV
Trigger: GACTCTGTGAGGTTCCCACCTGAAGAAGCAGTTCCATCTTCCACAAGGAGCACAGGACCAAGAGTCCAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527991.2
CDS CAA 90 bp ATGATCTCGGTGGCTATGCTCTTGCTGTCCTCGGCGAAGGTTGCTTaGACAAACATGGGGCCCAACGCAAAGCCCAGGTTGTTTTCTGTG +
Preference number: 6 (lower is better)
Translates to: MISVAMLLLSSAKVA*TNMGPNAKPRLFSV
Trigger: CACAGAAAACAACCTGGGCTTTGCGTTGGGCCCCATGTTTGTCAAAGCAACCTTCGCCGAGGACAGCAAGAGCATAGCCACCGAGATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000264205.10
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
ENST00000436918.6
ENST00000470394.1
ENST00000526194.5
ENST00000649812.1
CDS CAA 90 bp TTGTCTCATTTGCAGTTGTGGGTGCCACGCCTGGCCCCGAGTGTGTaGGGGAAGGTAAAGAACCTCCACTTTGGTCTTCTCAGTTCCCTT +
Preference number: 6 (lower is better)
Translates to: LSHLQLWVPRLAPSV*GKVKNLHFGLLSSL
Trigger: AAGGGAACTGAGAAGACCAAAGTGGAGGTTCTTTACCTTCCCCAACACACTCGGGGCCAGGCGTGGCACCCACAACTGCAAATGAGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527991.2
CDS CAA 90 bp CTTGTACGTCGACATCTGGGTCCTGGACTCTTGGTCCTGTGCTCCTaGTGGAAGATGGAACTGCTTCTTCAGGTGGGAACCTCACAGAGT +
Preference number: 6 (lower is better)
Translates to: LVRRHLGPGLLVLCS*WKMELLLQVGTSQS
Trigger: ACTCTGTGAGGTTCCCACCTGAAGAAGCAGTTCCATCTTCCACAAGGAGCACAGGACCAAGAGTCCAGGACCCAGATGTCGACGTACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527991.2
CDS TCA 72 bp CCGTACATGACTTCCATGAACTTCTCATCGGCGTCCTaGAAGCGCTGGTCAAGGAAGGAGCTTGTTTTCCGC +
Preference number: 6 (lower is better)
Translates to: PYMTSMNFSSAS*KRWSRKELVFR
Trigger: GCGGAAAACAAGCTCCTTCCTTGACCAGCGCTTTCAGGACGCCGATGAGAAGTTCATGGAAGTCATGTACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000264205.10
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
ENST00000436918.6
ENST00000526194.5
ENST00000528294.1
ENST00000649812.1
CDS TCA 72 bp CTCCCAGCTGGGTTTAAGGGGCTGAGTTGTCCACTCTaGTCTTCTCCAAGCACAAACTGCAAAGCAGACCAG +
Preference number: 6 (lower is better)
Translates to: LPAGFKGLSCPL*SSPSTNCKADQ
Trigger: CTGGTCTGCTTTGCAGTTTGTGCTTGGAGAAGATCAGAGTGGACAACTCAGCCCCTTAAACCCAGCTGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000481130.6
CDS GCA 72 bp GCCTGGGCTCAGCCTAGGGGAGCCCTCTTCTTGATGTaGACTCGTTTAGCCCTATGGCTTAAAATACCTTCT +
Preference number: 6 (lower is better)
Translates to: AWAQPRGALFLM*TRLALWLKIPS
Trigger: AGAAGGTATTTTAAGCCATAGGGCTAAACGAGTGCACATCAAGAAGAGGGCTCCCCTAGGCTGAGCCCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531334.1
CDS CCA 72 bp AAAGAACCTCCACTTTGGTCTTCTCAGTTCCCTTCCTaGCACTGTGCAGCCGTGGAGGAGAAATCTGGGTTG +
Preference number: 6 (lower is better)
Translates to: KEPPLWSSQFPS*HCAAVEEKSGL
Trigger: CAACCCAGATTTCTCCTCCACGGCTGCACAGTGCCAGGAAGGGAACTGAGAAGACCAAAGTGGAGGTTCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527991.2
CDS CAA 72 bp ATCTGGGCCTGGGCTCAGCCTAGGGGAGCCCTCTTCTaGATGTGCACTCGTTTAGCCCTATGGCTTAAAATA +
Preference number: 6 (lower is better)
Translates to: IWAWAQPRGALF*MCTRLALWLKI
Trigger: TATTTTAAGCCATAGGGCTAAACGAGTGCACATCAAGAAGAGGGCTCCCCTAGGCTGAGCCCAGGCCCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531334.1
CDS GCA 72 bp ATCCATCCACTTCAGGGTGCTCAGGCTTTCCTCAAATaGCTTCTTAATCTCCAGGATGATCTCGGTGGCTAT +
Preference number: 6 (lower is better)
Translates to: IHPLQGAQAFLK*LLNLQDDLGGY
Trigger: ATAGCCACCGAGATCATCCTGGAGATTAAGAAGGCATTTGAGGAAAGCCTGAGCACCCTGAAGTGGATGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000264205.10
ENST00000357071.8
ENST00000374893.11
ENST00000415912.6
ENST00000436918.6
ENST00000470394.1
ENST00000526194.5
ENST00000649812.1
CDS TCA 72 bp CGTTTAGCCCTATGGCTTAAAATACCTTCTACGCACTaGTGGCTCTCACATTTACACCTTCTGCTCCAGCCT +
Preference number: 6 (lower is better)
Translates to: RLALWLKIPSTH*WLSHLHLLLQP
Trigger: AGGCTGGAGCAGAAGGTGTAAATGTGAGAGCCATCAGTGCGTAGAAGGTATTTTAAGCCATAGGGCTAAACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531334.1