RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for ECD (Homo sapiens)

Ensembl gene IDs: ENSG00000122882

Ensembl transcript IDs: ENST00000372979.9, ENST00000413026.1, ENST00000430082.6, ENST00000453402.5, ENST00000454759.6, ENST00000484976.6, ENST00000494307.1, ENST00000610256.1

Found 190 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGCAGGTGTGTGCTAGTTCCTGGTCCATCTGGGCCATGTATGACTTaGGATTATCAAGTGTTCCTTTCAGGGAAGCCTCTTCGCCAGGTT +
Preference number: 1 (lower is better)
Translates to: CRCVLVPGPSGPCMT*DYQVFLSGKPLRQV
Trigger: AACCTGGCGAAGAGGCTTCCCTGAAAGGAACACTTGATAATCTCAAGTCATACATGGCCCAGATGGACCAGGAACTAGCACACACCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484976.6
3UTR TCA 90 bp GTTCTCGAGGCAGCTCTGCTCCCTTGTGGGTTGAGACTTTGGATATaGAAGCTTTCATGCTCTCTGAGACTTCAGTTAAGTCATAGTTCT +
Preference number: 1 (lower is better)
Translates to: VLEAALLPCGLRLWI*KLSCSLRLQLSHSS
Trigger: AGAACTATGACTTAACTGAAGTCTCAGAGAGCATGAAAGCTTTCATATCCAAAGTCTCAACCCACAAGGGAGCAGAGCTGCCTCGAGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484976.6
3UTR TCA 90 bp TACTGGTGCCATAACAGATTCTCCCGTACCAGAATCTTCCTCATCTaGATTGTTATCGGTAGTCTGGGATACAGGTTCCACTTGGTTCCT +
Preference number: 1 (lower is better)
Translates to: YWCHNRFSRTRIFLI*IVIGSLGYRFHLVP
Trigger: AGGAACCAAGTGGAACCTGTATCCCAGACTACCGATAACAATTCAGATGAGGAAGATTCTGGTACGGGAGAATCTGTTATGGCACCAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484976.6
3UTR TCA 90 bp AGGTCCTGCCAGTCCAGCTTGGGAGCTATAGGATTCCAATATATTTaGAACCAGGTTCAGGTCTACATCTACTGGTGCCATAACAGATTC +
Preference number: 1 (lower is better)
Translates to: RSCQSSLGAIGFQYI*NQVQVYIYWCHNRF
Trigger: GAATCTGTTATGGCACCAGTAGATGTAGACCTGAACCTGGTTTCAAATATATTGGAATCCTATAGCTCCCAAGCTGGACTGGCAGGACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484976.6
3UTR-3UTR TCA 90 bp GGTTCTCGAGGCAGCTCTGCTCCCTTGTGGGTTGAGACTTTGGATATGAAAGCTACTGGCCCAGAGTGGTaGGGCAGTCACAAGGGATTT +
Preference number: 2 (lower is better)
Translates to: GSRGSSAPLWVETLDMKATGPEW*GSHKGF
Trigger: AAATCCCTTGTGACTGCCTCACCACTCTGGGCCAGT...AGCTTTCATATCCAAAGTCTCAACCCACAAGGGAGCAGAGCTGCCTCGAGAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484976.6
3UTR-3UTR TCA 90 bp TGGAAGCAGGTCCTGCCAGTCCAGCTTGGGAGCTATAGGATTCCAATATATTTGTTCTGGCCAGTCTACTaGGAGCTGGAAGTAATTCTC +
Preference number: 2 (lower is better)
Translates to: WKQVLPVQLGSYRIPIYLFWPVY*ELEVIL
Trigger: GAGAATTACTTCCAGCTCTCAGTAGACTGGCCAGAA...CAAATATATTGGAATCCTATAGCTCCCAAGCTGGACTGGCAGGACCTGCTTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484976.6
3UTR-3UTR TCA 90 bp TGGAAGCAGGTCCTGCCAGTCCAGCTTGGGAGCTATAGGATTCCAATATATTTGTGCTCCCTTGTGGGTTaGGACTTTGGATATGAAAGC +
Preference number: 2 (lower is better)
Translates to: WKQVLPVQLGSYRIPIYLCSLVG*DFGYES
Trigger: GCTTTCATATCCAAAGTCTCAACCCACAAGGGAGCA...CAAATATATTGGAATCCTATAGCTCCCAAGCTGGACTGGCAGGACCTGCTTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484976.6
3UTR-3UTR CCA 90 bp GTAGTCTGGGATACAGGTTCCACTTGGTTCCTAGTGGTGAAACTTTTGCTGATGGTGTGTGCTAGTTCCTaGTCCATCTGGGCCATGTAT +
Preference number: 2 (lower is better)
Translates to: VVWDTGSTWFLVVKLLLMVCASS*SIWAMY
Trigger: ATACATGGCCCAGATGGACCAGGAACTAGCACACAC...CATCAGCAAAAGTTTCACCACTAGGAACCAAGTGGAACCTGTATCCCAGACTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484976.6
3UTR-3UTR CCA 90 bp GCTTACTTGTTGGTCTGTGATCGGTGTTGTCAGGCAGCTGCACTCCCATGCTTTGATACAGGTTCCACTTaGTTCCTAGTGGTGAAACTT +
Preference number: 2 (lower is better)
Translates to: AYLLVCDRCCQAAALPCFDTGST*FLVVKL
Trigger: AAGTTTCACCACTAGGAACCAAGTGGAACCTGTATC...AAAGCATGGGAGTGCAGCTGCCTGACAACACCGATCACAGACCAACAAGTAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484976.6
3UTR CAA 90 bp GGTGCCATAACAGATTCTCCCGTACCAGAATCTTCCTCATCTGAATaGTTATCGGTAGTCTGGGATACAGGTTCCACTTGGTTCCTAGTG +
Preference number: 2 (lower is better)
Translates to: GAITDSPVPESSSSE*LSVVWDTGSTWFLV
Trigger: CACTAGGAACCAAGTGGAACCTGTATCCCAGACTACCGATAACAATTCAGATGAGGAAGATTCTGGTACGGGAGAATCTGTTATGGCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484976.6
3UTR-3UTR TCA 90 bp TTAAGAAAAGAATCTGCATCAAAAGTGATTGGAGCCTCAGAAGGTTCTCGAGGCAGCAGCTGGTCCAGCTaGTCTGGTGAGAGATCTAAC +
Preference number: 2 (lower is better)
Translates to: LRKESASKVIGASEGSRGSSWSS*SGERSN
Trigger: GTTAGATCTCTCACCAGATCAGCTGGACCAGCTGCT...GCCTCGAGAACCTTCTGAGGCTCCAATCACTTTTGATGCAGATTCTTTTCTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484976.6
3UTR-3UTR CCA 90 bp TGGAAGCAGGTCCTGCCAGTCCAGCTTGGGAGCTATAGGATTCCAATATATTTGCAGGTCTACATCTACTaGTGCCATAACAGATTCTCC +
Preference number: 2 (lower is better)
Translates to: WKQVLPVQLGSYRIPIYLQVYIY*CHNRFS
Trigger: GGAGAATCTGTTATGGCACCAGTAGATGTAGACCTG...CAAATATATTGGAATCCTATAGCTCCCAAGCTGGACTGGCAGGACCTGCTTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484976.6
3UTR-3UTR GCA 90 bp AAGGTTAAGATTTCTTCACCAGGGCTCATAGCAAGAGAACTTTCTGGCCAGTCTTCACAAGGGATTTCTTaGAGTCAGAAAAATGTGGGC +
Preference number: 2 (lower is better)
Translates to: KVKISSPGLIARELSGQSSQGIS*SQKNVG
Trigger: GCCCACATTTTTCTGACTGCAAGAAATCCCTTGTGA...AGACTGGCCAGAAAGTTCTCTTGCTATGAGCCCTGGTGAAGAAATCTTAACCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484976.6
3UTR-3UTR CCA 90 bp TCCAGATCATCAGAATCTGACTCATTAGGCCTTGGCCCTAAAATCTTATCAAAAGAGAGATCTAACCACTaGTCATCATCCTCTGGGGGA +
Preference number: 2 (lower is better)
Translates to: SRSSESDSLGLGPKILSKERSNH*SSSSGG
Trigger: TCCCCCAGAGGATGATGACCAGTGGTTAGATCTCTC...TTTTGATAAGATTTTAGGGCCAAGGCCTAATGAGTCAGATTCTGATGATCTGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000484976.6
3UTR-3UTR CCA 90 bp TTAAGAAAAGAATCTGCATCAAAAGTGATTGGAGCCTCAGAAGGTTCTCGAGGCAATGTGGGCTACATTTaGAGCATAAGATCTCAAATC +
Preference number: 2 (lower is better)
Translates to: LRKESASKVIGASEGSRGNVGYI*SIRSQI
Trigger: GATTTGAGATCTTATGCTCCAAATGTAGCCCACATT...GCCTCGAGAACCTTCTGAGGCTCCAATCACTTTTGATGCAGATTCTTTTCTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484976.6
3UTR-3UTR TCA 90 bp TCTTGCTTCAGGTACATACATACATGCAAAAATTCACTGACTGTACACTTAAGATGTATAACCCACAGCTaGGATCACAAAGACTTGTGC +
Preference number: 2 (lower is better)
Translates to: SCFRYIHTCKNSLTVHLRCITHS*DHKDLC
Trigger: GCACAAGTCTTTGTGATCTCAGCTGTGGGTTATACA...TCTTAAGTGTACAGTCAGTGAATTTTTGCATGTATGTATGTACCTGAAGCAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372979.9
3UTR-3UTR CAA 90 bp GGTTCTCGAGGCAGCTCTGCTCCCTTGTGGGTTGAGACTTTGGATATGAAAGCTTGCTCCTTCTCCTCCTaGGAAACAGACTCGGATTCT +
Preference number: 3 (lower is better)
Translates to: GSRGSSAPLWVETLDMKACSFSS*ETDSDS
Trigger: AGAATCCGAGTCTGTTTCCAAGGAGGAGAAGGAGCA...AGCTTTCATATCCAAAGTCTCAACCCACAAGGGAGCAGAGCTGCCTCGAGAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484976.6
3UTR-3UTR CAA 90 bp GTAGTCTGGGATACAGGTTCCACTTGGTTCCTAGTGGTGAAACTTTTGCTGATGGGCAGCTCTGCTCCCTaGTGGGTTGAGACTTTGGAT +
Preference number: 3 (lower is better)
Translates to: VVWDTGSTWFLVVKLLLMGSSAP*WVETLD
Trigger: ATCCAAAGTCTCAACCCACAAGGGAGCAGAGCTGCC...CATCAGCAAAAGTTTCACCACTAGGAACCAAGTGGAACCTGTATCCCAGACTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484976.6
3UTR-3UTR CAA 90 bp GCTTACTTGTTGGTCTGTGATCGGTGTTGTCAGGCAGCTGCACTCCCATGCTTTCTAGTGGTGAAACTTTaGCTGATGCAGGTGTGTGCT +
Preference number: 3 (lower is better)
Translates to: AYLLVCDRCCQAAALPCFLVVKL*LMQVCA
Trigger: AGCACACACCTGCATCAGCAAAAGTTTCACCACTAG...AAAGCATGGGAGTGCAGCTGCCTGACAACACCGATCACAGACCAACAAGTAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484976.6
3UTR GCA 72 bp TGGCCCAGAGTGGTGAGGCAGTCACAAGGGATTTCTTaGAGTCAGAAAAATGTGGGCTACATTTGGAGCATA +
Preference number: 3 (lower is better)
Translates to: WPRVVRQSQGIS*SQKNVGYIWSI
Trigger: TATGCTCCAAATGTAGCCCACATTTTTCTGACTGCAAGAAATCCCTTGTGACTGCCTCACCACTCTGGGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484976.6
3UTR TCA 72 bp GTGCTAGTTCCTGGTCCATCTGGGCCATGTATGACTTaGGATTATCAAGTGTTCCTTTCAGGGAAGCCTCTT +
Preference number: 3 (lower is better)
Translates to: VLVPGPSGPCMT*DYQVFLSGKPL
Trigger: AAGAGGCTTCCCTGAAAGGAACACTTGATAATCTCAAGTCATACATGGCCCAGATGGACCAGGAACTAGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484976.6
3UTR CCA 72 bp GTGAAACTTTTGCTGATGCAGGTGTGTGCTAGTTCCTaGTCCATCTGGGCCATGTATGACTTGAGATTATCA +
Preference number: 3 (lower is better)
Translates to: VKLLLMQVCASS*SIWAMYDLRLS
Trigger: TGATAATCTCAAGTCATACATGGCCCAGATGGACCAGGAACTAGCACACACCTGCATCAGCAAAAGTTTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484976.6
3UTR TCA 72 bp CATAACAGATTCTCCCGTACCAGAATCTTCCTCATCTaGATTGTTATCGGTAGTCTGGGATACAGGTTCCAC +
Preference number: 3 (lower is better)
Translates to: HNRFSRTRIFLI*IVIGSLGYRFH
Trigger: GTGGAACCTGTATCCCAGACTACCGATAACAATTCAGATGAGGAAGATTCTGGTACGGGAGAATCTGTTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484976.6
3UTR TCA 72 bp CAGTCCAGCTTGGGAGCTATAGGATTCCAATATATTTaGAACCAGGTTCAGGTCTACATCTACTGGTGCCAT +
Preference number: 3 (lower is better)
Translates to: QSSLGAIGFQYI*NQVQVYIYWCH
Trigger: ATGGCACCAGTAGATGTAGACCTGAACCTGGTTTCAAATATATTGGAATCCTATAGCTCCCAAGCTGGACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484976.6
3UTR-3UTR CAA 90 bp TCTTGCTTCAGGTACATACATACATGCAAAAATTCACTGACTGTACACTTAAGACCAAGAGGGCCACATTaGGGGCTCATGGAGAAGTCA +
Preference number: 3 (lower is better)
Translates to: SCFRYIHTCKNSLTVHLRPRGPH*GLMEKS
Trigger: TGACTTCTCCATGAGCCCCAAATGTGGCCCTCTTGG...TCTTAAGTGTACAGTCAGTGAATTTTTGCATGTATGTATGTACCTGAAGCAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372979.9
3UTR-3UTR CAA 90 bp TTAAGAAAAGAATCTGCATCAAAAGTGATTGGAGCCTCAGAAGGTTCTCGAGGCGTCACAAGGGATTTCTaGCAGTCAGAAAAATGTGGG +
Preference number: 3 (lower is better)
Translates to: LRKESASKVIGASEGSRGVTRDF*QSEKCG
Trigger: CCCACATTTTTCTGACTGCAAGAAATCCCTTGTGAC...GCCTCGAGAACCTTCTGAGGCTCCAATCACTTTTGATGCAGATTCTTTTCTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000484976.6
3UTR-3UTR CAA 90 bp TCCAATATATTTGAAACCAGGTTCAGGTCTACATCTACTGGTGCCATAACAGATAAATGTGGGCTACATTaGGAGCATAAGATCTCAAAT +
Preference number: 3 (lower is better)
Translates to: SNIFETRFRSTSTGAITDKCGLH*EHKISN
Trigger: ATTTGAGATCTTATGCTCCAAATGTAGCCCACATTT...ATCTGTTATGGCACCAGTAGATGTAGACCTGAACCTGGTTTCAAATATATTGGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484976.6
CDS-3UTR TCA 90 bp GGGCCAAGGCGGGTGGATCACAAGATCAGGAGATCGAGACCATCCTGGCTGACACCGTTTGTTGGTCTGTaGTCGGTGTTGTCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: GPRRVDHKIRRSRPSWLTPFVGL*SVLSGS
Trigger: GCTGCCTGACAACACCGATCACAGACCAACAAACGG...TGTCAGCCAGGATGGTCTCGATCTCCTGATCTTGTGATCCACCCGCCTTGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494307.1
CDS-3UTR TCA 90 bp GGGCCAAGGCGGGTGGATCACAAGATCAGGAGATCGAGACCATCCTGGCTGACAAGGTGGAGCTTGCATTaGGCCAAGATAGCGCCACTG +
Preference number: 4 (lower is better)
Translates to: GPRRVDHKIRRSRPSWLTRWSLH*AKIAPL
Trigger: CAGTGGCGCTATCTTGGCTCAATGCAAGCTCCACCT...TGTCAGCCAGGATGGTCTCGATCTCCTGATCTTGTGATCCACCCGCCTTGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494307.1
CDS-3UTR GCA 90 bp GGGCCAAGGCGGGTGGATCACAAGATCAGGAGATCGAGACCATCCTGGCTGACAATTGGAAGCAGGTCCTaGCAGTCCAGCTTGGGAGCT +
Preference number: 4 (lower is better)
Translates to: GPRRVDHKIRRSRPSWLTIGSRS*QSSLGA
Trigger: AGCTCCCAAGCTGGACTGGCAGGACCTGCTTCCAAT...TGTCAGCCAGGATGGTCTCGATCTCCTGATCTTGTGATCCACCCGCCTTGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494307.1
CDS-3UTR TCA 90 bp GGGCCAAGGCGGGTGGATCACAAGATCAGGAGATCGAGACCATCCTGGCTGACATCCTGGCTGACACGGTaGAACCCTGTCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: GPRRVDHKIRRSRPSWLTSWLTR*NPVSTK
Trigger: TTTAGTAGAGACAGGGTTTCACCGTGTCAGCCAGGA...TGTCAGCCAGGATGGTCTCGATCTCCTGATCTTGTGATCCACCCGCCTTGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494307.1
CDS-3UTR CCA 90 bp GGGCCAAGGCGGGTGGATCACAAGATCAGGAGATCGAGACCATCCTGGCTGACAAGAGACTCCGTTTGTTaGTCTGTGATCGGTGTTGTC +
Preference number: 4 (lower is better)
Translates to: GPRRVDHKIRRSRPSWLTRDSVC*SVIGVV
Trigger: GACAACACCGATCACAGACCAACAAACGGAGTCTCT...TGTCAGCCAGGATGGTCTCGATCTCCTGATCTTGTGATCCACCCGCCTTGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494307.1
CDS-3UTR GCA 90 bp GGTTCTCGAGGCAGCTCTGCTCCCTTGTGGGTTGAGACTTTGGATATGAAAGCTATTGGAAGCAGGTCCTaGCAGTCCAGCTTGGGAGCT +
Preference number: 4 (lower is better)
Translates to: GSRGSSAPLWVETLDMKAIGSRS*QSSLGA
Trigger: AGCTCCCAAGCTGGACTGGCAGGACCTGCTTCCAAT...AGCTTTCATATCCAAAGTCTCAACCCACAAGGGAGCAGAGCTGCCTCGAGAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484976.6
CDS-3UTR GCA 90 bp GGGCCAAGGCGGGTGGATCACAAGATCAGGAGATCGAGACCATCCTGGCTGACAGCAGCTGCACTCCCATaGTTTGTAAAAGATTGGAAG +
Preference number: 4 (lower is better)
Translates to: GPRRVDHKIRRSRPSWLTAAALP*FVKDWK
Trigger: CTTCCAATCTTTTACAAAGCATGGGAGTGCAGCTGC...TGTCAGCCAGGATGGTCTCGATCTCCTGATCTTGTGATCCACCCGCCTTGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494307.1
3UTR CAA 72 bp TTGTCAGGCAGCTGCACTCCCATGCTTTGTAAAAGATaGGAAGCAGGTCCTGCCAGTCCAGCTTGGGAGCTA +
Preference number: 4 (lower is better)
Translates to: LSGSCTPMLCKR*EAGPASPAWEL
Trigger: TAGCTCCCAAGCTGGACTGGCAGGACCTGCTTCCAATCTTTTACAAAGCATGGGAGTGCAGCTGCCTGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484976.6
CDS-3UTR CCA 90 bp GCTGGTCCAGCTGATCTGGTGAGAGATCTAACCACTGGTCATCATCCTCTGGGGGAATTGTTGGGGGTGTaGTGGGTAACCAAGATTCTG +
Preference number: 4 (lower is better)
Translates to: AGPADLVRDLTTGHHPLGELLGV*WVTKIL
Trigger: CAGAATCTTGGTTACCCACCACACCCCCAACAATTC...CCCCAGAGGATGATGACCAGTGGTTAGATCTCTCACCAGATCAGCTGGACCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000484976.6
CDS-3UTR TCA 90 bp GAGAGATCTAACCACTGGTCATCATCCTCTGGGGGAAGATTAGCTGCTTCTTTCACTGGCCCAGAGTGGTaGGGCAGTCACAAGGGATTT +
Preference number: 4 (lower is better)
Translates to: ERSNHWSSSSGGRLAASFTGPEW*GSHKGF
Trigger: AAATCCCTTGTGACTGCCTCACCACTCTGGGCCAGT...GAAAGAAGCAGCTAATCTTCCCCCAGAGGATGATGACCAGTGGTTAGATCTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484976.6
CDS-3UTR TCA 90 bp TACTTGTTGGTCTGTGATCGGTGTTGTCAGGCAGCTGCACTCCCATGCTTTGTAAGCAGCTGGTCCAGCTaGTCTGGTGAGAGATCTAAC +
Preference number: 4 (lower is better)
Translates to: YLLVCDRCCQAAALPCFVSSWSS*SGERSN
Trigger: GTTAGATCTCTCACCAGATCAGCTGGACCAGCTGCT...TACAAAGCATGGGAGTGCAGCTGCCTGACAACACCGATCACAGACCAACAAGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484976.6
CDS-3UTR TCA 90 bp GGGCCAAGGCGGGTGGATCACAAGATCAGGAGATCGAGACCATCCTGGCTGACAGGATTCCAATATATTTaGAACCAGGTTCAGGTCTAC +
Preference number: 4 (lower is better)
Translates to: GPRRVDHKIRRSRPSWLTGFQYI*NQVQVY
Trigger: GTAGACCTGAACCTGGTTTCAAATATATTGGAATCC...TGTCAGCCAGGATGGTCTCGATCTCCTGATCTTGTGATCCACCCGCCTTGGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494307.1
CDS-3UTR CCA 90 bp GGTTCTCGAGGCAGCTCTGCTCCCTTGTGGGTTGAGACTTTGGATATGAAAGCTGAGAGATCTAACCACTaGTCATCATCCTCTGGGGGA +
Preference number: 4 (lower is better)
Translates to: GSRGSSAPLWVETLDMKAERSNH*SSSSGG
Trigger: TCCCCCAGAGGATGATGACCAGTGGTTAGATCTCTC...AGCTTTCATATCCAAAGTCTCAACCCACAAGGGAGCAGAGCTGCCTCGAGAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484976.6
CDS-3UTR CCA 90 bp GCTGGTCCAGCTGATCTGGTGAGAGATCTAACCACTGGTCATCATCCTCTGGGGTGCATCAAAAGTGATTaGAGCCTCAGAAGGTTCTCG +
Preference number: 4 (lower is better)
Translates to: AGPADLVRDLTTGHHPLGCIKSD*SLRRFS
Trigger: CGAGAACCTTCTGAGGCTCCAATCACTTTTGATGCA...CCCCAGAGGATGATGACCAGTGGTTAGATCTCTCACCAGATCAGCTGGACCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484976.6
CDS-3UTR GCA 90 bp GCCCAGAGTGGTGAGGCAGTCACAAGGGATTTCTTGCAGTCAGAAAAATGTGGGCATGAGCCAATTTCATaGCCAATTCATGGGCTCGGT +
Preference number: 4 (lower is better)
Translates to: AQSGEAVTRDFLQSEKCGHEPIS*PIHGLG
Trigger: ACCGAGCCCATGAATTGGGCATGAAATTGGCTCATG...CCCACATTTTTCTGACTGCAAGAAATCCCTTGTGACTGCCTCACCACTCTGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484976.6
CDS-3UTR CCA 90 bp GAATTGTTATCGGTAGTCTGGGATACAGGTTCCACTTGGTTCCTAGTGGTGAAATCATGGGCTCGGTACTaGGGATCAGATGGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: ELLSVVWDTGSTWFLVVKSWARY*GSDGGG
Trigger: GCCTCCTCCATCTGATCCCCAGTACCGAGCCCATGA...TTTCACCACTAGGAACCAAGTGGAACCTGTATCCCAGACTACCGATAACAATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484976.6
CDS-3UTR CCA 90 bp GGTTCTCGAGGCAGCTCTGCTCCCTTGTGGGTTGAGACTTTGGATATGAAAGCTAGTTCCTGGTCCATCTaGGCCATGTATGACTTGAGA +
Preference number: 4 (lower is better)
Translates to: GSRGSSAPLWVETLDMKASSWSI*AMYDLR
Trigger: TCTCAAGTCATACATGGCCCAGATGGACCAGGAACT...AGCTTTCATATCCAAAGTCTCAACCCACAAGGGAGCAGAGCTGCCTCGAGAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484976.6
CDS-3UTR GCA 90 bp GCTTACTTGTTGGTCTGTGATCGGTGTTGTCAGGCAGCTGCACTCCCATGCTTTGTCTACATCTACTGGTaGCATAACAGATTCTCCCGT +
Preference number: 4 (lower is better)
Translates to: AYLLVCDRCCQAAALPCFVYIYW*HNRFSR
Trigger: ACGGGAGAATCTGTTATGGCACCAGTAGATGTAGAC...AAAGCATGGGAGTGCAGCTGCCTGACAACACCGATCACAGACCAACAAGTAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484976.6
CDS-3UTR CCA 90 bp TCTTGCTTCAGGTACATACATACATGCAAAAATTCACTGACTGTACACTTAAGACCGGCCGCCGAAGCCTaGATCAGGCTCTGTCCCGAC +
Preference number: 4 (lower is better)
Translates to: SCFRYIHTCKNSLTVHLRPAAEA*IRLCPD
Trigger: GTCGGGACAGAGCCTGATCCAGGCTTCGGCGGCCGG...TCTTAAGTGTACAGTCAGTGAATTTTTGCATGTATGTATGTACCTGAAGCAAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372979.9
CDS-3UTR TCA 90 bp TCTTGCTTCAGGTACATACATACATGCAAAAATTCACTGACTGTACACTTAAGATCCGACTGCGAGAGCTaGTCGAGAGCTGCCACCGGC +
Preference number: 4 (lower is better)
Translates to: SCFRYIHTCKNSLTVHLRSDCES*SRAATG
Trigger: GCCGGTGGCAGCTCTCGATCAGCTCTCGCAGTCGGA...TCTTAAGTGTACAGTCAGTGAATTTTTGCATGTATGTATGTACCTGAAGCAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372979.9
CDS-3UTR TCA 90 bp GGTTCTCGAGGCAGCTCTGCTCCCTTGTGGGTTGAGACTTTGGATATGAAAGCTGGGCCATGTATGACTTaGGATTATCAAGTGTTCCTT +
Preference number: 4 (lower is better)
Translates to: GSRGSSAPLWVETLDMKAGPCMT*DYQVFL
Trigger: AAGGAACACTTGATAATCTCAAGTCATACATGGCCC...AGCTTTCATATCCAAAGTCTCAACCCACAAGGGAGCAGAGCTGCCTCGAGAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484976.6
CDS-3UTR TCA 90 bp GCCCAGAGTGGTGAGGCAGTCACAAGGGATTTCTTGCAGTCAGAAAAATGTGGGCATCTGGGCCATGTATaGCTTGAGATTATCAAGTGT +
Preference number: 4 (lower is better)
Translates to: AQSGEAVTRDFLQSEKCGHLGHV*LEIIKC
Trigger: ACACTTGATAATCTCAAGTCATACATGGCCCAGATG...CCCACATTTTTCTGACTGCAAGAAATCCCTTGTGACTGCCTCACCACTCTGGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484976.6
CDS-3UTR TCA 90 bp AAGGTTAAGATTTCTTCACCAGGGCTCATAGCAAGAGAACTTTCTGGCCAGTCTGTGAATGTGACCCTCTaGTGCGCCTATTCACAGCAG +
Preference number: 4 (lower is better)
Translates to: KVKISSPGLIARELSGQSVNVTL*CAYSQQ
Trigger: CTGCTGTGAATAGGCGCATCAGAGGGTCACATTCAC...AGACTGGCCAGAAAGTTCTCTTGCTATGAGCCCTGGTGAAGAAATCTTAACCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484976.6
CDS-3UTR GCA 90 bp TCTTGCTTCAGGTACATACATACATGCAAAAATTCACTGACTGTACACTTAAGAGAGCTGATCGAGAGCTaGCACCGGCCGCCGAAGCCT +
Preference number: 4 (lower is better)
Translates to: SCFRYIHTCKNSLTVHLRELIES*HRPPKP
Trigger: AGGCTTCGGCGGCCGGTGGCAGCTCTCGATCAGCTC...TCTTAAGTGTACAGTCAGTGAATTTTTGCATGTATGTATGTACCTGAAGCAAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372979.9
CDS-3UTR CCA 90 bp AGTGGTGAGGCAGTCACAAGGGATTTCTTGCAGTCAGAAAAATGTGGGCTACATTTGTTGGGGGTGTGGTaGGTAACCAAGATTCTGCTC +
Preference number: 4 (lower is better)
Translates to: SGEAVTRDFLQSEKCGLHLLGVW*VTKILL
Trigger: GAGCAGAATCTTGGTTACCCACCACACCCCCAACAA...ATGTAGCCCACATTTTTCTGACTGCAAGAAATCCCTTGTGACTGCCTCACCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000484976.6
CDS-3UTR CCA 90 bp AGTGGTGAGGCAGTCACAAGGGATTTCTTGCAGTCAGAAAAATGTGGGCTACATTTCATGCCCAATTCATaGGCTCGGTACTGGGGATCA +
Preference number: 4 (lower is better)
Translates to: SGEAVTRDFLQSEKCGLHFMPNS*ARYWGS
Trigger: TGATCCCCAGTACCGAGCCCATGAATTGGGCATGAA...ATGTAGCCCACATTTTTCTGACTGCAAGAAATCCCTTGTGACTGCCTCACCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000484976.6
CDS-3UTR CCA 90 bp GTAGTCTGGGATACAGGTTCCACTTGGTTCCTAGTGGTGAAACTTTTGCTGATGCTGGTCATCATCCTCTaGGGGAAGATTAGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: VVWDTGSTWFLVVKLLLMLVIIL*GKISCF
Trigger: GAAGCAGCTAATCTTCCCCCAGAGGATGATGACCAG...CATCAGCAAAAGTTTCACCACTAGGAACCAAGTGGAACCTGTATCCCAGACTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484976.6
CDS-3UTR CCA 90 bp TTCAGGGAAGCCTCTTCGCCAGGTTCGTGTGTTTCAAAGTCCAAGTCATCATCAGCTCCTTCTCCTCCTTaGAAACAGACTCGGATTCTT +
Preference number: 4 (lower is better)
Translates to: FREASSPGSCVSKSKSSSAPSPP*KQTRIL
Trigger: AAGAATCCGAGTCTGTTTCCAAGGAGGAGAAGGAGC...TGATGATGACTTGGACTTTGAAACACACGAACCTGGCGAAGAGGCTTCCCTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484976.6
CDS-3UTR TCA 90 bp GAATTGTTATCGGTAGTCTGGGATACAGGTTCCACTTGGTTCCTAGTGGTGAAAAGCCTTTCCCGGTACTaGGCAGAACCTTCTATCAGT +
Preference number: 4 (lower is better)
Translates to: ELLSVVWDTGSTWFLVVKSLSRY*AEPSIS
Trigger: ACTGATAGAAGGTTCTGCTCAGTACCGGGAAAGGCT...TTTCACCACTAGGAACCAAGTGGAACCTGTATCCCAGACTACCGATAACAATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484976.6
CDS-3UTR TCA 90 bp AGTGGTGAGGCAGTCACAAGGGATTTCTTGCAGTCAGAAAAATGTGGGCTACATTTCTGGCCAGTCTACTaGGAGCTGGAAGTAATTCTC +
Preference number: 4 (lower is better)
Translates to: SGEAVTRDFLQSEKCGLHFWPVY*ELEVIL
Trigger: GAGAATTACTTCCAGCTCTCAGTAGACTGGCCAGAA...ATGTAGCCCACATTTTTCTGACTGCAAGAAATCCCTTGTGACTGCCTCACCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484976.6
CDS-3UTR CCA 90 bp AAGGTTAAGATTTCTTCACCAGGGCTCATAGCAAGAGAACTTTCTGGCCAGTCTGTGTGTGCTAGTTCCTaGTCCATCTGGGCCATGTAT +
Preference number: 4 (lower is better)
Translates to: KVKISSPGLIARELSGQSVCASS*SIWAMY
Trigger: ATACATGGCCCAGATGGACCAGGAACTAGCACACAC...AGACTGGCCAGAAAGTTCTCTTGCTATGAGCCCTGGTGAAGAAATCTTAACCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484976.6
CDS-3UTR CCA 90 bp TACTTGTTGGTCTGTGATCGGTGTTGTCAGGCAGCTGCACTCCCATGCTTTGTAGATACAGGTTCCACTTaGTTCCTAGTGGTGAAACTT +
Preference number: 4 (lower is better)
Translates to: YLLVCDRCCQAAALPCFVDTGST*FLVVKL
Trigger: AAGTTTCACCACTAGGAACCAAGTGGAACCTGTATC...TACAAAGCATGGGAGTGCAGCTGCCTGACAACACCGATCACAGACCAACAAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484976.6
CDS-3UTR CCA 90 bp GAGAGATCTAACCACTGGTCATCATCCTCTGGGGGAAGATTAGCTGCTTCTTTCTTGTTATCGGTAGTCTaGGATACAGGTTCCACTTGG +
Preference number: 4 (lower is better)
Translates to: ERSNHWSSSSGGRLAASFLLSVV*DTGSTW
Trigger: CCAAGTGGAACCTGTATCCCAGACTACCGATAACAA...GAAAGAAGCAGCTAATCTTCCCCCAGAGGATGATGACCAGTGGTTAGATCTCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484976.6
CDS-3UTR TCA 90 bp TACTTGTTGGTCTGTGATCGGTGTTGTCAGGCAGCTGCACTCCCATGCTTTGTAAGAATCTTCCTCATCTaGATTGTTATCGGTAGTCTG +
Preference number: 4 (lower is better)
Translates to: YLLVCDRCCQAAALPCFVRIFLI*IVIGSL
Trigger: CAGACTACCGATAACAATTCAGATGAGGAAGATTCT...TACAAAGCATGGGAGTGCAGCTGCCTGACAACACCGATCACAGACCAACAAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484976.6
CDS-3UTR TCA 90 bp TTAAGAAAAGAATCTGCATCAAAAGTGATTGGAGCCTCAGAAGGTTCTCGAGGCTTACTTGTTGGTCTGTaGTCGGTGTTGTCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: LRKESASKVIGASEGSRGLLVGL*SVLSGS
Trigger: GCTGCCTGACAACACCGATCACAGACCAACAAGTAA...GCCTCGAGAACCTTCTGAGGCTCCAATCACTTTTGATGCAGATTCTTTTCTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484976.6
CDS-3UTR GCA 90 bp TTCAGGGAAGCCTCTTCGCCAGGTTCGTGTGTTTCAAAGTCCAAGTCATCATCATCACAAGGGATTTCTTaGAGTCAGAAAAATGTGGGC +
Preference number: 4 (lower is better)
Translates to: FREASSPGSCVSKSKSSSSQGIS*SQKNVG
Trigger: GCCCACATTTTTCTGACTGCAAGAAATCCCTTGTGA...TGATGATGACTTGGACTTTGAAACACACGAACCTGGCGAAGAGGCTTCCCTGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484976.6
CDS-3UTR CCA 90 bp TCCAATATATTTGAAACCAGGTTCAGGTCTACATCTACTGGTGCCATAACAGATGTACTGGGGATCAGATaGAGGAGGCAGCCTGTATCC +
Preference number: 4 (lower is better)
Translates to: SNIFETRFRSTSTGAITDVLGIR*RRQPVS
Trigger: GGATACAGGCTGCCTCCTCCATCTGATCCCCAGTAC...ATCTGTTATGGCACCAGTAGATGTAGACCTGAACCTGGTTTCAAATATATTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484976.6
3UTR CAA 72 bp ACAGATTCTCCCGTACCAGAATCTTCCTCATCTGAATaGTTATCGGTAGTCTGGGATACAGGTTCCACTTGG +
Preference number: 4 (lower is better)
Translates to: TDSPVPESSSSE*LSVVWDTGSTW
Trigger: CCAAGTGGAACCTGTATCCCAGACTACCGATAACAATTCAGATGAGGAAGATTCTGGTACGGGAGAATCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484976.6
3UTR CAA 72 bp CCAGTCCAGCTTGGGAGCTATAGGATTCCAATATATTaGAAACCAGGTTCAGGTCTACATCTACTGGTGCCA +
Preference number: 4 (lower is better)
Translates to: PVQLGSYRIPIY*KPGSGLHLLVP
Trigger: TGGCACCAGTAGATGTAGACCTGAACCTGGTTTCAAATATATTGGAATCCTATAGCTCCCAAGCTGGACTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484976.6
CDS-3UTR TCA 90 bp GAGAGATCTAACCACTGGTCATCATCCTCTGGGGGAAGATTAGCTGCTTCTTTCGGATTCCAATATATTTaGAACCAGGTTCAGGTCTAC +
Preference number: 4 (lower is better)
Translates to: ERSNHWSSSSGGRLAASFGFQYI*NQVQVY
Trigger: GTAGACCTGAACCTGGTTTCAAATATATTGGAATCC...GAAAGAAGCAGCTAATCTTCCCCCAGAGGATGATGACCAGTGGTTAGATCTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484976.6
CDS-3UTR TCA 90 bp TCCAATATATTTGAAACCAGGTTCAGGTCTACATCTACTGGTGCCATAACAGATGTCACGCCAAACATATaGGCAGGAACACCTCGGTTC +
Preference number: 4 (lower is better)
Translates to: SNIFETRFRSTSTGAITDVTPNI*AGTPRF
Trigger: GAACCGAGGTGTTCCTGCTCATATGTTTGGCGTGAC...ATCTGTTATGGCACCAGTAGATGTAGACCTGAACCTGGTTTCAAATATATTGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484976.6
CDS-3UTR GCA 90 bp TCTTGCTTCAGGTACATACATACATGCAAAAATTCACTGACTGTACACTTAAGAAAATGCCTGGACTGCTaGAGCCACCAATCTGGGGCG +
Preference number: 4 (lower is better)
Translates to: SCFRYIHTCKNSLTVHLRKCLDC*SHQSGA
Trigger: CGCCCCAGATTGGTGGCTGCAGCAGTCCAGGCATTT...TCTTAAGTGTACAGTCAGTGAATTTTTGCATGTATGTATGTACCTGAAGCAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372979.9
CDS-3UTR GCA 90 bp AGTGGTGAGGCAGTCACAAGGGATTTCTTGCAGTCAGAAAAATGTGGGCTACATTGGGGGAAGATTAGCTaGTTCTTTCTTAAGGTCTTC +
Preference number: 4 (lower is better)
Translates to: SGEAVTRDFLQSEKCGLHWGKIS*FFLKVF
Trigger: GAAGACCTTAAGAAAGAAGCAGCTAATCTTCCCCCA...ATGTAGCCCACATTTTTCTGACTGCAAGAAATCCCTTGTGACTGCCTCACCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000484976.6
CDS-3UTR GCA 90 bp GAATTGTTATCGGTAGTCTGGGATACAGGTTCCACTTGGTTCCTAGTGGTGAAAGCAGCTGCACTCCCATaGTTTGTAAAAGATTGGAAG +
Preference number: 4 (lower is better)
Translates to: ELLSVVWDTGSTWFLVVKAAALP*FVKDWK
Trigger: CTTCCAATCTTTTACAAAGCATGGGAGTGCAGCTGC...TTTCACCACTAGGAACCAAGTGGAACCTGTATCCCAGACTACCGATAACAATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484976.6
CDS-3UTR CCA 90 bp TCTTGCTTCAGGTACATACATACATGCAAAAATTCACTGACTGTACACTTAAGACTGCAGCCACCAATCTaGGGCGCTGCTTTAGCACTG +
Preference number: 4 (lower is better)
Translates to: SCFRYIHTCKNSLTVHLRLQPPI*GAALAL
Trigger: CAGTGCTAAAGCAGCGCCCCAGATTGGTGGCTGCAG...TCTTAAGTGTACAGTCAGTGAATTTTTGCATGTATGTATGTACCTGAAGCAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372979.9
CDS-3UTR CCA 90 bp TCTTGCTTCAGGTACATACATACATGCAAAAATTCACTGACTGTACACTTAAGATCATGGGCTCGGTACTaGGGATCAGATGGAGGAGGC +
Preference number: 4 (lower is better)
Translates to: SCFRYIHTCKNSLTVHLRSWARY*GSDGGG
Trigger: GCCTCCTCCATCTGATCCCCAGTACCGAGCCCATGA...TCTTAAGTGTACAGTCAGTGAATTTTTGCATGTATGTATGTACCTGAAGCAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372979.9
CDS-3UTR CCA 90 bp GATTCTCCCGTACCAGAATCTTCCTCATCTGAATTGTTATCGGTAGTCTGGGATTGTTGGCTTACTTGTTaGTCTGTGATCGGTGTTGTC +
Preference number: 4 (lower is better)
Translates to: DSPVPESSSSELLSVVWDCWLTC*SVIGVV
Trigger: GACAACACCGATCACAGACCAACAAGTAAGCCAACA...ATCCCAGACTACCGATAACAATTCAGATGAGGAAGATTCTGGTACGGGAGAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484976.6
CDS-3UTR TCA 90 bp TCTTGCTTCAGGTACATACATACATGCAAAAATTCACTGACTGTACACTTAAGAACTGGCCCAGAGTGGTaGGGCAGTCACAAGGGATTT +
Preference number: 4 (lower is better)
Translates to: SCFRYIHTCKNSLTVHLRTGPEW*GSHKGF
Trigger: AAATCCCTTGTGACTGCCTCACCACTCTGGGCCAGT...TCTTAAGTGTACAGTCAGTGAATTTTTGCATGTATGTATGTACCTGAAGCAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372979.9
CDS-3UTR TCA 90 bp TCCAGATCATCAGAATCTGACTCATTAGGCCTTGGCCCTAAAATCTTATCAAAACAGATCATCAGAATCTaGCTCATTAGGCCTTGGCCC +
Preference number: 4 (lower is better)
Translates to: SRSSESDSLGLGPKILSKQIIRI*LIRPWP
Trigger: GGGCCAAGGCCTAATGAGTCAGATTCTGATGATCTG...TTTTGATAAGATTTTAGGGCCAAGGCCTAATGAGTCAGATTCTGATGATCTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484976.6
CDS-3UTR GCA 90 bp TCTTGCTTCAGGTACATACATACATGCAAAAATTCACTGACTGTACACTTAAGAATTGGAAGCAGGTCCTaGCAGTCCAGCTTGGGAGCT +
Preference number: 4 (lower is better)
Translates to: SCFRYIHTCKNSLTVHLRIGSRS*QSSLGA
Trigger: AGCTCCCAAGCTGGACTGGCAGGACCTGCTTCCAAT...TCTTAAGTGTACAGTCAGTGAATTTTTGCATGTATGTATGTACCTGAAGCAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372979.9
CDS-3UTR CCA 90 bp TCTTGCTTCAGGTACATACATACATGCAAAAATTCACTGACTGTACACTTAAGAGTACTGGGGATCAGATaGAGGAGGCAGCCTGTATCC +
Preference number: 4 (lower is better)
Translates to: SCFRYIHTCKNSLTVHLRVLGIR*RRQPVS
Trigger: GGATACAGGCTGCCTCCTCCATCTGATCCCCAGTAC...TCTTAAGTGTACAGTCAGTGAATTTTTGCATGTATGTATGTACCTGAAGCAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372979.9
CDS-3UTR TCA 90 bp TCTTGCTTCAGGTACATACATACATGCAAAAATTCACTGACTGTACACTTAAGATTTCTGGGTACCCTCTaGTGCGCCTATTCACAGCAG +
Preference number: 4 (lower is better)
Translates to: SCFRYIHTCKNSLTVHLRFLGTL*CAYSQQ
Trigger: CTGCTGTGAATAGGCGCATCAGAGGGTACCCAGAAA...TCTTAAGTGTACAGTCAGTGAATTTTTGCATGTATGTATGTACCTGAAGCAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372979.9
CDS-3UTR TCA 90 bp TCTTGCTTCAGGTACATACATACATGCAAAAATTCACTGACTGTACACTTAAGAAGCAGCTGGTCCAGCTaGTCTGGTGAGAGATCTAAC +
Preference number: 4 (lower is better)
Translates to: SCFRYIHTCKNSLTVHLRSSWSS*SGERSN
Trigger: GTTAGATCTCTCACCAGATCAGCTGGACCAGCTGCT...TCTTAAGTGTACAGTCAGTGAATTTTTGCATGTATGTATGTACCTGAAGCAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372979.9
CDS-3UTR TCA 90 bp GAATTGTTATCGGTAGTCTGGGATACAGGTTCCACTTGGTTCCTAGTGGTGAAATTGAGACTTTGGATATaGAAGCTTTCATGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: ELLSVVWDTGSTWFLVVKLRLWI*KLSCSL
Trigger: CAGAGAGCATGAAAGCTTTCATATCCAAAGTCTCAA...TTTCACCACTAGGAACCAAGTGGAACCTGTATCCCAGACTACCGATAACAATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484976.6
CDS-3UTR GCA 90 bp GATTCTCCCGTACCAGAATCTTCCTCATCTGAATTGTTATCGGTAGTCTGGGATAAAATACCCTATTGGTaGTATTTTCAGGATCCAGCC +
Preference number: 4 (lower is better)
Translates to: DSPVPESSSSELLSVVWDKIPYW*YFQDPA
Trigger: GGCTGGATCCTGAAAATAGCACCAATAGGGTATTTT...ATCCCAGACTACCGATAACAATTCAGATGAGGAAGATTCTGGTACGGGAGAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484976.6
CDS-3UTR GCA 90 bp TCTTGCTTCAGGTACATACATACATGCAAAAATTCACTGACTGTACACTTAAGAACCAATCTGGGGCGCTaGTTTAGCACTGCCACAATG +
Preference number: 4 (lower is better)
Translates to: SCFRYIHTCKNSLTVHLRTNLGR*FSTATM
Trigger: CATTGTGGCAGTGCTAAAGCAGCGCCCCAGATTGGT...TCTTAAGTGTACAGTCAGTGAATTTTTGCATGTATGTATGTACCTGAAGCAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372979.9
CDS-3UTR CCA 90 bp AAAGAATCTGCATCAAAAGTGATTGGAGCCTCAGAAGGTTCTCGAGGCAGCTCTATACACAATTCCCCATaGCAGAAAAATACCCTATTG +
Preference number: 4 (lower is better)
Translates to: KESASKVIGASEGSRGSSIHNSP*QKNTLL
Trigger: CAATAGGGTATTTTTCTGCCATGGGGAATTGTGTAT...AGAGCTGCCTCGAGAACCTTCTGAGGCTCCAATCACTTTTGATGCAGATTCTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000484976.6
CDS-3UTR CCA 90 bp AAGGTTAAGATTTCTTCACCAGGGCTCATAGCAAGAGAACTTTCTGGCCAGTCTTGCTCCAGATTTTCTTaGTGCAGGGATAATACACAA +
Preference number: 4 (lower is better)
Translates to: KVKISSPGLIARELSGQSCSRFS*CRDNTQ
Trigger: TTGTGTATTATCCCTGCACCAAGAAAATCTGGAGCA...AGACTGGCCAGAAAGTTCTCTTGCTATGAGCCCTGGTGAAGAAATCTTAACCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484976.6
CDS-3UTR TCA 90 bp TCTTGCTTCAGGTACATACATACATGCAAAAATTCACTGACTGTACACTTAAGAGTCACGCCAAACATATaGGCAGGAACACCTCCTTTC +
Preference number: 4 (lower is better)
Translates to: SCFRYIHTCKNSLTVHLRVTPNI*AGTPPF
Trigger: GAAAGGAGGTGTTCCTGCTCATATGTTTGGCGTGAC...TCTTAAGTGTACAGTCAGTGAATTTTTGCATGTATGTATGTACCTGAAGCAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372979.9
CDS-3UTR TCA 90 bp TCTTGCTTCAGGTACATACATACATGCAAAAATTCACTGACTGTACACTTAAGAAGCCTTTCCCGGTACTaGGCAGAACCTTCTATCAGT +
Preference number: 4 (lower is better)
Translates to: SCFRYIHTCKNSLTVHLRSLSRY*AEPSIS
Trigger: ACTGATAGAAGGTTCTGCTCAGTACCGGGAAAGGCT...TCTTAAGTGTACAGTCAGTGAATTTTTGCATGTATGTATGTACCTGAAGCAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372979.9
CDS-3UTR TCA 90 bp TCTTGCTTCAGGTACATACATACATGCAAAAATTCACTGACTGTACACTTAAGACAGATCATCAGAATCTaGCTCATTAGGCCTTGGCCC +
Preference number: 4 (lower is better)
Translates to: SCFRYIHTCKNSLTVHLRQIIRI*LIRPWP
Trigger: GGGCCAAGGCCTAATGAGTCAGATTCTGATGATCTG...TCTTAAGTGTACAGTCAGTGAATTTTTGCATGTATGTATGTACCTGAAGCAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372979.9
CDS-3UTR TCA 90 bp TCTTGCTTCAGGTACATACATACATGCAAAAATTCACTGACTGTACACTTAAGATTACTTGTTGGTCTGTaGTCGGTGTTGTCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: SCFRYIHTCKNSLTVHLRLLVGL*SVLSGS
Trigger: GCTGCCTGACAACACCGATCACAGACCAACAAGTAA...TCTTAAGTGTACAGTCAGTGAATTTTTGCATGTATGTATGTACCTGAAGCAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372979.9
CDS-3UTR CCA 90 bp TCTTGCTTCAGGTACATACATACATGCAAAAATTCACTGACTGTACACTTAAGATTGTTGGGGGTGTGGTaGGTAACCAAGATTCTGCTC +
Preference number: 4 (lower is better)
Translates to: SCFRYIHTCKNSLTVHLRLLGVW*VTKILL
Trigger: GAGCAGAATCTTGGTTACCCACCACACCCCCAACAA...TCTTAAGTGTACAGTCAGTGAATTTTTGCATGTATGTATGTACCTGAAGCAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000372979.9
CDS-3UTR CCA 90 bp TCTTGCTTCAGGTACATACATACATGCAAAAATTCACTGACTGTACACTTAAGATTCATGCCCAATTCATaGGCTCGGTACTGGGGATCA +
Preference number: 4 (lower is better)
Translates to: SCFRYIHTCKNSLTVHLRFMPNS*ARYWGS
Trigger: TGATCCCCAGTACCGAGCCCATGAATTGGGCATGAA...TCTTAAGTGTACAGTCAGTGAATTTTTGCATGTATGTATGTACCTGAAGCAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372979.9
CDS-3UTR CCA 90 bp AAGGTTAAGATTTCTTCACCAGGGCTCATAGCAAGAGAACTTTCTGGCCAGTCTAATGTGGGCTACATTTaGAGCATAAGATCTCAAATC +
Preference number: 4 (lower is better)
Translates to: KVKISSPGLIARELSGQSNVGYI*SIRSQI
Trigger: GATTTGAGATCTTATGCTCCAAATGTAGCCCACATT...AGACTGGCCAGAAAGTTCTCTTGCTATGAGCCCTGGTGAAGAAATCTTAACCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484976.6
CDS-3UTR CCA 90 bp TCTTGCTTCAGGTACATACATACATGCAAAAATTCACTGACTGTACACTTAAGACTGGTCATCATCCTCTaGGGGAAGATTAGCTGCTTC +
Preference number: 4 (lower is better)
Translates to: SCFRYIHTCKNSLTVHLRLVIIL*GKISCF
Trigger: GAAGCAGCTAATCTTCCCCCAGAGGATGATGACCAG...TCTTAAGTGTACAGTCAGTGAATTTTTGCATGTATGTATGTACCTGAAGCAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372979.9
CDS-3UTR CCA 90 bp TCTTGCTTCAGGTACATACATACATGCAAAAATTCACTGACTGTACACTTAAGAGAGAGATCTAACCACTaGTCATCATCCTCTGGGGGA +
Preference number: 4 (lower is better)
Translates to: SCFRYIHTCKNSLTVHLRERSNH*SSSSGG
Trigger: TCCCCCAGAGGATGATGACCAGTGGTTAGATCTCTC...TCTTAAGTGTACAGTCAGTGAATTTTTGCATGTATGTATGTACCTGAAGCAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000372979.9
CDS-3UTR CCA 90 bp TCTTGCTTCAGGTACATACATACATGCAAAAATTCACTGACTGTACACTTAAGAGTGTGTGCTAGTTCCTaGTCCATCTGGGCCATGTAT +
Preference number: 4 (lower is better)
Translates to: SCFRYIHTCKNSLTVHLRVCASS*SIWAMY
Trigger: ATACATGGCCCAGATGGACCAGGAACTAGCACACAC...TCTTAAGTGTACAGTCAGTGAATTTTTGCATGTATGTATGTACCTGAAGCAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372979.9
CDS-3UTR TCA 90 bp TCTTGCTTCAGGTACATACATACATGCAAAAATTCACTGACTGTACACTTAAGACAGGCAAGAATGTCTTaGAAACACGACAAGCTCGCA +
Preference number: 4 (lower is better)
Translates to: SCFRYIHTCKNSLTVHLRQARMS*KHDKLA
Trigger: TGCGAGCTTGTCGTGTTTTCAAGACATTCTTGCCTG...TCTTAAGTGTACAGTCAGTGAATTTTTGCATGTATGTATGTACCTGAAGCAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372979.9
CDS-3UTR TCA 90 bp TCTTGCTTCAGGTACATACATACATGCAAAAATTCACTGACTGTACACTTAAGATTCTGGCCAGTCTACTaGGAGCTGGAAGTAATTCTC +
Preference number: 4 (lower is better)
Translates to: SCFRYIHTCKNSLTVHLRFWPVY*ELEVIL
Trigger: GAGAATTACTTCCAGCTCTCAGTAGACTGGCCAGAA...TCTTAAGTGTACAGTCAGTGAATTTTTGCATGTATGTATGTACCTGAAGCAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372979.9
CDS-3UTR TCA 90 bp TCTTGCTTCAGGTACATACATACATGCAAAAATTCACTGACTGTACACTTAAGATGCTCCCTTGTGGGTTaGGACTTTGGATATGAAAGC +
Preference number: 4 (lower is better)
Translates to: SCFRYIHTCKNSLTVHLRCSLVG*DFGYES
Trigger: GCTTTCATATCCAAAGTCTCAACCCACAAGGGAGCA...TCTTAAGTGTACAGTCAGTGAATTTTTGCATGTATGTATGTACCTGAAGCAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372979.9
CDS-3UTR GCA 90 bp TCTTGCTTCAGGTACATACATACATGCAAAAATTCACTGACTGTACACTTAAGAGGGGACCAGCATAGGTaGAAACCGAGTGATTATTCT +
Preference number: 4 (lower is better)
Translates to: SCFRYIHTCKNSLTVHLRGDQHR*KPSDYS
Trigger: AGAATAATCACTCGGTTTGCACCTATGCTGGTCCCC...TCTTAAGTGTACAGTCAGTGAATTTTTGCATGTATGTATGTACCTGAAGCAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372979.9
CDS-3UTR GCA 90 bp TCTTGCTTCAGGTACATACATACATGCAAAAATTCACTGACTGTACACTTAAGACATGAGCCAATTTCATaGCCAATTCATGGGCTCGGT +
Preference number: 4 (lower is better)
Translates to: SCFRYIHTCKNSLTVHLRHEPIS*PIHGLG
Trigger: ACCGAGCCCATGAATTGGGCATGAAATTGGCTCATG...TCTTAAGTGTACAGTCAGTGAATTTTTGCATGTATGTATGTACCTGAAGCAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372979.9
CDS-3UTR CCA 90 bp TCTTGCTTCAGGTACATACATACATGCAAAAATTCACTGACTGTACACTTAAGAGAATTGTTGGGGGTGTaGTGGGTAACCAAGATTCTG +
Preference number: 4 (lower is better)
Translates to: SCFRYIHTCKNSLTVHLRELLGV*WVTKIL
Trigger: CAGAATCTTGGTTACCCACCACACCCCCAACAATTC...TCTTAAGTGTACAGTCAGTGAATTTTTGCATGTATGTATGTACCTGAAGCAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000372979.9
CDS-3UTR CCA 90 bp TCTTGCTTCAGGTACATACATACATGCAAAAATTCACTGACTGTACACTTAAGAGCTCCTTCTCCTCCTTaGAAACAGACTCGGATTCTT +
Preference number: 4 (lower is better)
Translates to: SCFRYIHTCKNSLTVHLRAPSPP*KQTRIL
Trigger: AAGAATCCGAGTCTGTTTCCAAGGAGGAGAAGGAGC...TCTTAAGTGTACAGTCAGTGAATTTTTGCATGTATGTATGTACCTGAAGCAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372979.9
CDS-3UTR CCA 90 bp TCTTGCTTCAGGTACATACATACATGCAAAAATTCACTGACTGTACACTTAAGAAGTTCCTGGTCCATCTaGGCCATGTATGACTTGAGA +
Preference number: 4 (lower is better)
Translates to: SCFRYIHTCKNSLTVHLRSSWSI*AMYDLR
Trigger: TCTCAAGTCATACATGGCCCAGATGGACCAGGAACT...TCTTAAGTGTACAGTCAGTGAATTTTTGCATGTATGTATGTACCTGAAGCAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372979.9
CDS-3UTR GCA 90 bp TCCAGATCATCAGAATCTGACTCATTAGGCCTTGGCCCTAAAATCTTATCAAAAGGCACAAACCTTTGTTaGACCAATTGTGCATATAGA +
Preference number: 4 (lower is better)
Translates to: SRSSESDSLGLGPKILSKGTNLC*TNCAYR
Trigger: TCTATATGCACAATTGGTGCAACAAAGGTTTGTGCC...TTTTGATAAGATTTTAGGGCCAAGGCCTAATGAGTCAGATTCTGATGATCTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484976.6
CDS-3UTR GCA 90 bp TCTTGCTTCAGGTACATACATACATGCAAAAATTCACTGACTGTACACTTAAGAGTCTACATCTACTGGTaGCATAACAGATTCTCCCGT +
Preference number: 4 (lower is better)
Translates to: SCFRYIHTCKNSLTVHLRVYIYW*HNRFSR
Trigger: ACGGGAGAATCTGTTATGGCACCAGTAGATGTAGAC...TCTTAAGTGTACAGTCAGTGAATTTTTGCATGTATGTATGTACCTGAAGCAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372979.9
CDS-3UTR GCA 90 bp TCTTGCTTCAGGTACATACATACATGCAAAAATTCACTGACTGTACACTTAAGAGCAGCTGCACTCCCATaGTTTGTAAAAGATTGGAAG +
Preference number: 4 (lower is better)
Translates to: SCFRYIHTCKNSLTVHLRAAALP*FVKDWK
Trigger: CTTCCAATCTTTTACAAAGCATGGGAGTGCAGCTGC...TCTTAAGTGTACAGTCAGTGAATTTTTGCATGTATGTATGTACCTGAAGCAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372979.9
CDS-3UTR CCA 90 bp TCTTGCTTCAGGTACATACATACATGCAAAAATTCACTGACTGTACACTTAAGATGCATCAAAAGTGATTaGAGCCTCAGAAGGTTCTCG +
Preference number: 4 (lower is better)
Translates to: SCFRYIHTCKNSLTVHLRCIKSD*SLRRFS
Trigger: CGAGAACCTTCTGAGGCTCCAATCACTTTTGATGCA...TCTTAAGTGTACAGTCAGTGAATTTTTGCATGTATGTATGTACCTGAAGCAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372979.9
CDS-3UTR CCA 90 bp TCTTGCTTCAGGTACATACATACATGCAAAAATTCACTGACTGTACACTTAAGATTGTTATCGGTAGTCTaGGATACAGGTTCCACTTGG +
Preference number: 4 (lower is better)
Translates to: SCFRYIHTCKNSLTVHLRLLSVV*DTGSTW
Trigger: CCAAGTGGAACCTGTATCCCAGACTACCGATAACAA...TCTTAAGTGTACAGTCAGTGAATTTTTGCATGTATGTATGTACCTGAAGCAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372979.9
CDS-3UTR CCA 90 bp TCTTGCTTCAGGTACATACATACATGCAAAAATTCACTGACTGTACACTTAAGACAGGTCTACATCTACTaGTGCCATAACAGATTCTCC +
Preference number: 4 (lower is better)
Translates to: SCFRYIHTCKNSLTVHLRQVYIY*CHNRFS
Trigger: GGAGAATCTGTTATGGCACCAGTAGATGTAGACCTG...TCTTAAGTGTACAGTCAGTGAATTTTTGCATGTATGTATGTACCTGAAGCAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372979.9
CDS-3UTR CCA 90 bp TCTTGCTTCAGGTACATACATACATGCAAAAATTCACTGACTGTACACTTAAGATGTTGGCTTACTTGTTaGTCTGTGATCGGTGTTGTC +
Preference number: 4 (lower is better)
Translates to: SCFRYIHTCKNSLTVHLRCWLTC*SVIGVV
Trigger: GACAACACCGATCACAGACCAACAAGTAAGCCAACA...TCTTAAGTGTACAGTCAGTGAATTTTTGCATGTATGTATGTACCTGAAGCAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372979.9
CDS-3UTR TCA 90 bp TCTTGCTTCAGGTACATACATACATGCAAAAATTCACTGACTGTACACTTAAGATCTTCCATTCTTCTTTaGAAAGGTTCTAGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: SCFRYIHTCKNSLTVHLRSSILL*KGSRAS
Trigger: AGAGGCCCTAGAACCTTTTCAAAGAAGAATGGAAGA...TCTTAAGTGTACAGTCAGTGAATTTTTGCATGTATGTATGTACCTGAAGCAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372979.9
CDS-3UTR TCA 90 bp TCTTGCTTCAGGTACATACATACATGCAAAAATTCACTGACTGTACACTTAAGAGGGCCATGTATGACTTaGGATTATCAAGTGTTCCTT +
Preference number: 4 (lower is better)
Translates to: SCFRYIHTCKNSLTVHLRGPCMT*DYQVFL
Trigger: AAGGAACACTTGATAATCTCAAGTCATACATGGCCC...TCTTAAGTGTACAGTCAGTGAATTTTTGCATGTATGTATGTACCTGAAGCAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372979.9
CDS-3UTR TCA 90 bp TCTTGCTTCAGGTACATACATACATGCAAAAATTCACTGACTGTACACTTAAGACATCTGGGCCATGTATaGCTTGAGATTATCAAGTGT +
Preference number: 4 (lower is better)
Translates to: SCFRYIHTCKNSLTVHLRHLGHV*LEIIKC
Trigger: ACACTTGATAATCTCAAGTCATACATGGCCCAGATG...TCTTAAGTGTACAGTCAGTGAATTTTTGCATGTATGTATGTACCTGAAGCAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372979.9
CDS-3UTR GCA 90 bp TCTTGCTTCAGGTACATACATACATGCAAAAATTCACTGACTGTACACTTAAGATCACAAGGGATTTCTTaGAGTCAGAAAAATGTGGGC +
Preference number: 4 (lower is better)
Translates to: SCFRYIHTCKNSLTVHLRSQGIS*SQKNVG
Trigger: GCCCACATTTTTCTGACTGCAAGAAATCCCTTGTGA...TCTTAAGTGTACAGTCAGTGAATTTTTGCATGTATGTATGTACCTGAAGCAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000372979.9
CDS-3UTR GCA 90 bp TCTTGCTTCAGGTACATACATACATGCAAAAATTCACTGACTGTACACTTAAGATGGGGGAAGATTAGCTaGTTCTTTCTTAAGGTCTTC +
Preference number: 4 (lower is better)
Translates to: SCFRYIHTCKNSLTVHLRWGKIS*FFLKVF
Trigger: GAAGACCTTAAGAAAGAAGCAGCTAATCTTCCCCCA...TCTTAAGTGTACAGTCAGTGAATTTTTGCATGTATGTATGTACCTGAAGCAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000372979.9
CDS-3UTR CCA 90 bp TCTTGCTTCAGGTACATACATACATGCAAAAATTCACTGACTGTACACTTAAGAGATACAGGTTCCACTTaGTTCCTAGTGGTGAAACTT +
Preference number: 4 (lower is better)
Translates to: SCFRYIHTCKNSLTVHLRDTGST*FLVVKL
Trigger: AAGTTTCACCACTAGGAACCAAGTGGAACCTGTATC...TCTTAAGTGTACAGTCAGTGAATTTTTGCATGTATGTATGTACCTGAAGCAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372979.9
CDS-3UTR TCA 90 bp TCTTGCTTCAGGTACATACATACATGCAAAAATTCACTGACTGTACACTTAAGATTGAGACTTTGGATATaGAAGCTTTCATGCTCTCTG +
Preference number: 4 (lower is better)
Translates to: SCFRYIHTCKNSLTVHLRLRLWI*KLSCSL
Trigger: CAGAGAGCATGAAAGCTTTCATATCCAAAGTCTCAA...TCTTAAGTGTACAGTCAGTGAATTTTTGCATGTATGTATGTACCTGAAGCAAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372979.9
CDS-3UTR TCA 90 bp TCTTGCTTCAGGTACATACATACATGCAAAAATTCACTGACTGTACACTTAAGAAGAATCTTCCTCATCTaGATTGTTATCGGTAGTCTG +
Preference number: 4 (lower is better)
Translates to: SCFRYIHTCKNSLTVHLRRIFLI*IVIGSL
Trigger: CAGACTACCGATAACAATTCAGATGAGGAAGATTCT...TCTTAAGTGTACAGTCAGTGAATTTTTGCATGTATGTATGTACCTGAAGCAAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372979.9
CDS-3UTR TCA 90 bp TCTTGCTTCAGGTACATACATACATGCAAAAATTCACTGACTGTACACTTAAGAGGATTCCAATATATTTaGAACCAGGTTCAGGTCTAC +
Preference number: 4 (lower is better)
Translates to: SCFRYIHTCKNSLTVHLRGFQYI*NQVQVY
Trigger: GTAGACCTGAACCTGGTTTCAAATATATTGGAATCC...TCTTAAGTGTACAGTCAGTGAATTTTTGCATGTATGTATGTACCTGAAGCAAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372979.9
CDS-3UTR GCA 90 bp TCTTGCTTCAGGTACATACATACATGCAAAAATTCACTGACTGTACACTTAAGAAAAATACCCTATTGGTaGTATTTTCAGGATCCAGCC +
Preference number: 4 (lower is better)
Translates to: SCFRYIHTCKNSLTVHLRKIPYW*YFQDPA
Trigger: GGCTGGATCCTGAAAATAGCACCAATAGGGTATTTT...TCTTAAGTGTACAGTCAGTGAATTTTTGCATGTATGTATGTACCTGAAGCAAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000372979.9
CDS-3UTR GCA 90 bp TCTTGCTTCAGGTACATACATACATGCAAAAATTCACTGACTGTACACTTAAGAGGCACAAACCTTTGTTaGACCAATTGTGCATATAGA +
Preference number: 4 (lower is better)
Translates to: SCFRYIHTCKNSLTVHLRGTNLC*TNCAYR
Trigger: TCTATATGCACAATTGGTGCAACAAAGGTTTGTGCC...TCTTAAGTGTACAGTCAGTGAATTTTTGCATGTATGTATGTACCTGAAGCAAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372979.9
CDS-3UTR CCA 90 bp TCTTGCTTCAGGTACATACATACATGCAAAAATTCACTGACTGTACACTTAAGATGCTCCAGATTTTCTTaGTGCAGGGATAATACACAA +
Preference number: 4 (lower is better)
Translates to: SCFRYIHTCKNSLTVHLRCSRFS*CRDNTQ
Trigger: TTGTGTATTATCCCTGCACCAAGAAAATCTGGAGCA...TCTTAAGTGTACAGTCAGTGAATTTTTGCATGTATGTATGTACCTGAAGCAAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372979.9
CDS-3UTR GCA 90 bp TCTTGCTTCAGGTACATACATACATGCAAAAATTCACTGACTGTACACTTAAGATCCAGATTTTCTTGGTaGAGGGATAATACACAATTC +
Preference number: 4 (lower is better)
Translates to: SCFRYIHTCKNSLTVHLRSRFSW*RDNTQF
Trigger: GAATTGTGTATTATCCCTGCACCAAGAAAATCTGGA...TCTTAAGTGTACAGTCAGTGAATTTTTGCATGTATGTATGTACCTGAAGCAAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372979.9
CDS-3UTR CCA 90 bp TCTTGCTTCAGGTACATACATACATGCAAAAATTCACTGACTGTACACTTAAGAATACACAATTCCCCATaGCAGAAAAATACCCTATTG +
Preference number: 4 (lower is better)
Translates to: SCFRYIHTCKNSLTVHLRIHNSP*QKNTLL
Trigger: CAATAGGGTATTTTTCTGCCATGGGGAATTGTGTAT...TCTTAAGTGTACAGTCAGTGAATTTTTGCATGTATGTATGTACCTGAAGCAAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000372979.9
CDS-3UTR CCA 90 bp TCTTGCTTCAGGTACATACATACATGCAAAAATTCACTGACTGTACACTTAAGAAATGTGGGCTACATTTaGAGCATAAGATCTCAAATC +
Preference number: 4 (lower is better)
Translates to: SCFRYIHTCKNSLTVHLRNVGYI*SIRSQI
Trigger: GATTTGAGATCTTATGCTCCAAATGTAGCCCACATT...TCTTAAGTGTACAGTCAGTGAATTTTTGCATGTATGTATGTACCTGAAGCAAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372979.9
CDS TCA 90 bp TCTGCTGTGGCACCTTTCCTTAGCCGCCTCTCCGACTGCGAGAGCTaGTCGAGAGCTGCCACCGGCCGCCGAAGCCTGGATCAGGCTCTG +
Preference number: 5 (lower is better)
Translates to: SAVAPFLSRLSDCES*SRAATGRRSLDQAL
Trigger: CAGAGCCTGATCCAGGCTTCGGCGGCCGGTGGCAGCTCTCGATCAGCTCTCGCAGTCGGAGAGGCGGCTAAGGAAAGGTGCCACAGCAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372979.9
ENST00000413026.1
ENST00000430082.6
ENST00000453402.5
ENST00000454759.6
CDS TCA 90 bp CTGCCACCGGCCGCCGAAGCCTGGATCAGGCTCTGTCCCGACGCCTaGCCGGAACCTGAAGCCAGCGGAAATCCTGAGAGAAAGTCTGAA +
Preference number: 5 (lower is better)
Translates to: LPPAAEAWIRLCPDA*PEPEASGNPERKSE
Trigger: TTCAGACTTTCTCTCAGGATTTCCGCTGGCTTCAGGTTCCGGTCAGGCGTCGGGACAGAGCCTGATCCAGGCTTCGGCGGCCGGTGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413026.1
ENST00000430082.6
ENST00000453402.5
ENST00000454759.6
CDS-3UTR CAA 90 bp GGGCCAAGGCGGGTGGATCACAAGATCAGGAGATCGAGACCATCCTGGCTGACAGAGGTGGAGCTTGCATaGAGCCAAGATAGCGCCACT +
Preference number: 5 (lower is better)
Translates to: GPRRVDHKIRRSRPSWLTEVELA*SQDSAT
Trigger: AGTGGCGCTATCTTGGCTCAATGCAAGCTCCACCTC...TGTCAGCCAGGATGGTCTCGATCTCCTGATCTTGTGATCCACCCGCCTTGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494307.1
CDS CCA 90 bp AGCCAATTTCATGCCCAATTCATGGGCTCGGTACTGGGGATCAGATaGAGGAGGCAGCCTGTATCCACTCCGCCGGTCTGGCACAAACCT +
Preference number: 5 (lower is better)
Translates to: SQFHAQFMGSVLGIR*RRQPVSTPPVWHKP
Trigger: AGGTTTGTGCCAGACCGGCGGAGTGGATACAGGCTGCCTCCTCCATCTGATCCCCAGTACCGAGCCCATGAATTGGGCATGAAATTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372979.9
ENST00000430082.6
ENST00000484976.6
CDS-3UTR CAA 90 bp GGGCCAAGGCGGGTGGATCACAAGATCAGGAGATCGAGACCATCCTGGCTGACATCCTGCCAGTCCAGCTaGGGAGCTATAGGATTCCAA +
Preference number: 5 (lower is better)
Translates to: GPRRVDHKIRRSRPSWLTSCQSS*GAIGFQ
Trigger: TTGGAATCCTATAGCTCCCAAGCTGGACTGGCAGGA...TGTCAGCCAGGATGGTCTCGATCTCCTGATCTTGTGATCCACCCGCCTTGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494307.1
CDS-3UTR CAA 90 bp GGGCCAAGGCGGGTGGATCACAAGATCAGGAGATCGAGACCATCCTGGCTGACAGAGAGACTCCGTTTGTaGGTCTGTGATCGGTGTTGT +
Preference number: 5 (lower is better)
Translates to: GPRRVDHKIRRSRPSWLTERLRL*VCDRCC
Trigger: ACAACACCGATCACAGACCAACAAACGGAGTCTCTC...TGTCAGCCAGGATGGTCTCGATCTCCTGATCTTGTGATCCACCCGCCTTGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494307.1
CDS-3UTR CAA 90 bp GGGCCAAGGCGGGTGGATCACAAGATCAGGAGATCGAGACCATCCTGGCTGACAAGAGAGAGACTCCGTTaGTTGGTCTGTGATCGGTGT +
Preference number: 5 (lower is better)
Translates to: GPRRVDHKIRRSRPSWLTRERLR*LVCDRC
Trigger: ACACCGATCACAGACCAACAAACGGAGTCTCTCTCT...TGTCAGCCAGGATGGTCTCGATCTCCTGATCTTGTGATCCACCCGCCTTGGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494307.1
CDS-3UTR CAA 90 bp CCTCAGAAGGTTCTCGAGGCAGCTCTGCTCCCTTGTGGGTTGAGACTTTGGATATCCTGCCAGTCCAGCTaGGGAGCTATAGGATTCCAA +
Preference number: 5 (lower is better)
Translates to: PQKVLEAALLPCGLRLWISCQSS*GAIGFQ
Trigger: TTGGAATCCTATAGCTCCCAAGCTGGACTGGCAGGA...TATCCAAAGTCTCAACCCACAAGGGAGCAGAGCTGCCTCGAGAACCTTCTGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484976.6
CDS-3UTR CAA 90 bp GGGCCAAGGCGGGTGGATCACAAGATCAGGAGATCGAGACCATCCTGGCTGACAATGCTTTGTAAAAGATaGGAAGCAGGTCCTGCCAGT +
Preference number: 5 (lower is better)
Translates to: GPRRVDHKIRRSRPSWLTMLCKR*EAGPAS
Trigger: ACTGGCAGGACCTGCTTCCAATCTTTTACAAAGCAT...TGTCAGCCAGGATGGTCTCGATCTCCTGATCTTGTGATCCACCCGCCTTGGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000494307.1
CDS-3UTR CAA 90 bp GCCCAGAGTGGTGAGGCAGTCACAAGGGATTTCTTGCAGTCAGAAAAATGTGGGATGCTTGTGGAATTGTaGGGGGTGTGGTGGGTAACC +
Preference number: 5 (lower is better)
Translates to: AQSGEAVTRDFLQSEKCGMLVEL*GVWWVT
Trigger: GGTTACCCACCACACCCCCAACAATTCCACAAGCAT...CCCACATTTTTCTGACTGCAAGAAATCCCTTGTGACTGCCTCACCACTCTGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000484976.6
CDS-3UTR CAA 90 bp GAGAGATCTAACCACTGGTCATCATCCTCTGGGGGAAGATTAGCTGCTTCTTTCGGCAGCTCTGCTCCCTaGTGGGTTGAGACTTTGGAT +
Preference number: 5 (lower is better)
Translates to: ERSNHWSSSSGGRLAASFGSSAP*WVETLD
Trigger: ATCCAAAGTCTCAACCCACAAGGGAGCAGAGCTGCC...GAAAGAAGCAGCTAATCTTCCCCCAGAGGATGATGACCAGTGGTTAGATCTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484976.6
CDS-3UTR CAA 90 bp CCTCAGAAGGTTCTCGAGGCAGCTCTGCTCCCTTGTGGGTTGAGACTTTGGATAGTCTGGCACAAACCTTaGTTGCACCAATTGTGCATA +
Preference number: 5 (lower is better)
Translates to: PQKVLEAALLPCGLRLWIVWHKP*LHQLCI
Trigger: TATGCACAATTGGTGCAACAAAGGTTTGTGCCAGAC...TATCCAAAGTCTCAACCCACAAGGGAGCAGAGCTGCCTCGAGAACCTTCTGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484976.6
CDS-3UTR CAA 90 bp GCCCAGAGTGGTGAGGCAGTCACAAGGGATTTCTTGCAGTCAGAAAAATGTGGGGGATACAGGTTCCACTaGGTTCCTAGTGGTGAAACT +
Preference number: 5 (lower is better)
Translates to: AQSGEAVTRDFLQSEKCGGYRFH*VPSGET
Trigger: AGTTTCACCACTAGGAACCAAGTGGAACCTGTATCC...CCCACATTTTTCTGACTGCAAGAAATCCCTTGTGACTGCCTCACCACTCTGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000484976.6
CDS-3UTR CAA 90 bp GGGCCAAGGCGGGTGGATCACAAGATCAGGAGATCGAGACCATCCTGGCTGACAAGGATTCCAATATATTaGAAACCAGGTTCAGGTCTA +
Preference number: 5 (lower is better)
Translates to: GPRRVDHKIRRSRPSWLTRIPIY*KPGSGL
Trigger: TAGACCTGAACCTGGTTTCAAATATATTGGAATCCT...TGTCAGCCAGGATGGTCTCGATCTCCTGATCTTGTGATCCACCCGCCTTGGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000494307.1
CDS-3UTR CAA 90 bp TTTCAGGGAAGCCTCTTCGCCAGGTTCGTGTGTTTCAAAGTCCAAGTCATCATCTCAATGCTTGTGGAATaGTTGGGGGTGTGGTGGGTA +
Preference number: 5 (lower is better)
Translates to: FQGSLFARFVCFKVQVIISMLVE*LGVWWV
Trigger: TACCCACCACACCCCCAACAATTCCACAAGCATTGA...GATGATGACTTGGACTTTGAAACACACGAACCTGGCGAAGAGGCTTCCCTGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484976.6
CDS-3UTR CAA 90 bp CCTCAGAAGGTTCTCGAGGCAGCTCTGCTCCCTTGTGGGTTGAGACTTTGGATATGGGCCATGTATGACTaGAGATTATCAAGTGTTCCT +
Preference number: 5 (lower is better)
Translates to: PQKVLEAALLPCGLRLWIWAMYD*RLSSVP
Trigger: AGGAACACTTGATAATCTCAAGTCATACATGGCCCA...TATCCAAAGTCTCAACCCACAAGGGAGCAGAGCTGCCTCGAGAACCTTCTGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484976.6
CDS-3UTR CAA 90 bp AGTGGTGAGGCAGTCACAAGGGATTTCTTGCAGTCAGAAAAATGTGGGCTACATCTAGTGGTGAAACTTTaGCTGATGCAGGTGTGTGCT +
Preference number: 5 (lower is better)
Translates to: SGEAVTRDFLQSEKCGLHLVVKL*LMQVCA
Trigger: AGCACACACCTGCATCAGCAAAAGTTTCACCACTAG...ATGTAGCCCACATTTTTCTGACTGCAAGAAATCCCTTGTGACTGCCTCACCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484976.6
CDS-3UTR CAA 90 bp TGGAAGCAGGTCCTGCCAGTCCAGCTTGGGAGCTATAGGATTCCAATATATTTGTGTTATCCCCAAACTTaGTCACGCCAAACATATGAG +
Preference number: 5 (lower is better)
Translates to: WKQVLPVQLGSYRIPIYLCYPQT*SRQTYE
Trigger: CTCATATGTTTGGCGTGACAAAGTTTGGGGATAACA...CAAATATATTGGAATCCTATAGCTCCCAAGCTGGACTGGCAGGACCTGCTTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484976.6
CDS-3UTR CAA 90 bp GCTTACTTGTTGGTCTGTGATCGGTGTTGTCAGGCAGCTGCACTCCCATGCTTTCATTGTCTTCAATCCTaGCTACTAACTCTGGAAATT +
Preference number: 5 (lower is better)
Translates to: AYLLVCDRCCQAAALPCFHCLQS*LLTLEI
Trigger: AATTTCCAGAGTTAGTAGCAAGGATTGAAGACAATG...AAAGCATGGGAGTGCAGCTGCCTGACAACACCGATCACAGACCAACAAGTAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484976.6
CDS-3UTR CAA 90 bp TTTCAGGGAAGCCTCTTCGCCAGGTTCGTGTGTTTCAAAGTCCAAGTCATCATCTCTTCCTCATCTGAATaGTTATCGGTAGTCTGGGAT +
Preference number: 5 (lower is better)
Translates to: FQGSLFARFVCFKVQVIISSSSE*LSVVWD
Trigger: ATCCCAGACTACCGATAACAATTCAGATGAGGAAGA...GATGATGACTTGGACTTTGAAACACACGAACCTGGCGAAGAGGCTTCCCTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484976.6
CDS-3UTR CAA 90 bp AAAGAATCTGCATCAAAAGTGATTGGAGCCTCAGAAGGTTCTCGAGGCAGCTCTTTGTTGGCTTACTTGTaGGTCTGTGATCGGTGTTGT +
Preference number: 5 (lower is better)
Translates to: KESASKVIGASEGSRGSSLLAYL*VCDRCC
Trigger: ACAACACCGATCACAGACCAACAAGTAAGCCAACAA...AGAGCTGCCTCGAGAACCTTCTGAGGCTCCAATCACTTTTGATGCAGATTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484976.6
CDS-3UTR CAA 90 bp TACTTGTTGGTCTGTGATCGGTGTTGTCAGGCAGCTGCACTCCCATGCTTTGTAAAGAATTCACCATCATaGTCTTCAATCCTTGCTACT +
Preference number: 5 (lower is better)
Translates to: YLLVCDRCCQAAALPCFVKNSPS*SSILAT
Trigger: AGTAGCAAGGATTGAAGACAATGATGGTGAATTCTT...TACAAAGCATGGGAGTGCAGCTGCCTGACAACACCGATCACAGACCAACAAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484976.6
CDS-3UTR CAA 90 bp GAGAGATCTAACCACTGGTCATCATCCTCTGGGGGAAGATTAGCTGCTTCTTTCCAGAAAAATACCCTATaGGTGCTATTTTCAGGATCC +
Preference number: 5 (lower is better)
Translates to: ERSNHWSSSSGGRLAASFQKNTL*VLFSGS
Trigger: GGATCCTGAAAATAGCACCAATAGGGTATTTTTCTG...GAAAGAAGCAGCTAATCTTCCCCCAGAGGATGATGACCAGTGGTTAGATCTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000484976.6
CDS-3UTR CAA 90 bp GAATTGTTATCGGTAGTCTGGGATACAGGTTCCACTTGGTTCCTAGTGGTGAAAGTCACAAGGGATTTCTaGCAGTCAGAAAAATGTGGG +
Preference number: 5 (lower is better)
Translates to: ELLSVVWDTGSTWFLVVKVTRDF*QSEKCG
Trigger: CCCACATTTTTCTGACTGCAAGAAATCCCTTGTGAC...TTTCACCACTAGGAACCAAGTGGAACCTGTATCCCAGACTACCGATAACAATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484976.6
CDS-3UTR CAA 90 bp TCCAATATATTTGAAACCAGGTTCAGGTCTACATCTACTGGTGCCATAACAGATTGCTCCTTCTCCTCCTaGGAAACAGACTCGGATTCT +
Preference number: 5 (lower is better)
Translates to: SNIFETRFRSTSTGAITDCSFSS*ETDSDS
Trigger: AGAATCCGAGTCTGTTTCCAAGGAGGAGAAGGAGCA...ATCTGTTATGGCACCAGTAGATGTAGACCTGAACCTGGTTTCAAATATATTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484976.6
CDS-3UTR CAA 90 bp TCTTGCTTCAGGTACATACATACATGCAAAAATTCACTGACTGTACACTTAAGAGGCAGCTCTGCTCCCTaGTGGGTTGAGACTTTGGAT +
Preference number: 5 (lower is better)
Translates to: SCFRYIHTCKNSLTVHLRGSSAP*WVETLD
Trigger: ATCCAAAGTCTCAACCCACAAGGGAGCAGAGCTGCC...TCTTAAGTGTACAGTCAGTGAATTTTTGCATGTATGTATGTACCTGAAGCAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372979.9
CDS-3UTR CAA 90 bp GAGAGATCTAACCACTGGTCATCATCCTCTGGGGGAAGATTAGCTGCTTCTTTCAGGATTCCAATATATTaGAAACCAGGTTCAGGTCTA +
Preference number: 5 (lower is better)
Translates to: ERSNHWSSSSGGRLAASFRIPIY*KPGSGL
Trigger: TAGACCTGAACCTGGTTTCAAATATATTGGAATCCT...GAAAGAAGCAGCTAATCTTCCCCCAGAGGATGATGACCAGTGGTTAGATCTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484976.6
CDS CCA 90 bp CAGTCACAAGGGATTTCTTGCAGTCAGAAAAATGTGGGCTACATTTaGAGCATAAGATCTCAAATCCATGAGCCGATGTCATTATTCGTG +
Preference number: 5 (lower is better)
Translates to: QSQGISCSQKNVGYI*SIRSQIHEPMSLFV
Trigger: CACGAATAATGACATCGGCTCATGGATTTGAGATCTTATGCTCCAAATGTAGCCCACATTTTTCTGACTGCAAGAAATCCCTTGTGACTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454759.6
CDS-3UTR CAA 90 bp TCTTGCTTCAGGTACATACATACATGCAAAAATTCACTGACTGTACACTTAAGAATGCTTGTGGAATTGTaGGGGGTGTGGTGGGTAACC +
Preference number: 5 (lower is better)
Translates to: SCFRYIHTCKNSLTVHLRMLVEL*GVWWVT
Trigger: GGTTACCCACCACACCCCCAACAATTCCACAAGCAT...TCTTAAGTGTACAGTCAGTGAATTTTTGCATGTATGTATGTACCTGAAGCAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000372979.9
CDS-3UTR CAA 90 bp GTAGTCTGGGATACAGGTTCCACTTGGTTCCTAGTGGTGAAACTTTTGCTGATGAAATGTGGGCTACATTaGGAGCATAAGATCTCAAAT +
Preference number: 5 (lower is better)
Translates to: VVWDTGSTWFLVVKLLLMKCGLH*EHKISN
Trigger: ATTTGAGATCTTATGCTCCAAATGTAGCCCACATTT...CATCAGCAAAAGTTTCACCACTAGGAACCAAGTGGAACCTGTATCCCAGACTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484976.6
CDS-3UTR CAA 90 bp TCTTGCTTCAGGTACATACATACATGCAAAAATTCACTGACTGTACACTTAAGATCCTGCCAGTCCAGCTaGGGAGCTATAGGATTCCAA +
Preference number: 5 (lower is better)
Translates to: SCFRYIHTCKNSLTVHLRSCQSS*GAIGFQ
Trigger: TTGGAATCCTATAGCTCCCAAGCTGGACTGGCAGGA...TCTTAAGTGTACAGTCAGTGAATTTTTGCATGTATGTATGTACCTGAAGCAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372979.9
CDS-3UTR CAA 90 bp TTAAGAAAAGAATCTGCATCAAAAGTGATTGGAGCCTCAGAAGGTTCTCGAGGCTTTTTGTTGGCTTACTaGTTGGTCTGTGATCGGTGT +
Preference number: 5 (lower is better)
Translates to: LRKESASKVIGASEGSRGFLLAY*LVCDRC
Trigger: ACACCGATCACAGACCAACAAGTAAGCCAACAAAAA...GCCTCGAGAACCTTCTGAGGCTCCAATCACTTTTGATGCAGATTCTTTTCTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000484976.6
CDS-3UTR CAA 90 bp AAGGTTAAGATTTCTTCACCAGGGCTCATAGCAAGAGAACTTTCTGGCCAGTCTGTGCTGGTTAATTTTTaGTTGGCTTACTTGTTGGTC +
Preference number: 5 (lower is better)
Translates to: KVKISSPGLIARELSGQSVLVNF*LAYLLV
Trigger: GACCAACAAGTAAGCCAACAAAAAATTAACCAGCAC...AGACTGGCCAGAAAGTTCTCTTGCTATGAGCCCTGGTGAAGAAATCTTAACCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484976.6
CDS CCA 90 bp CAGTCACAAGGGATTTCTTGCAGTCAGAAAAATGTGGGCTACATTTaGAGCATAAGATCTCAAATCCATGAGCCAATTTCATGCCCAATT +
Preference number: 5 (lower is better)
Translates to: QSQGISCSQKNVGYI*SIRSQIHEPISCPI
Trigger: AATTGGGCATGAAATTGGCTCATGGATTTGAGATCTTATGCTCCAAATGTAGCCCACATTTTTCTGACTGCAAGAAATCCCTTGTGACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372979.9
ENST00000430082.6
ENST00000484976.6
CDS-3UTR CAA 90 bp TCTTGCTTCAGGTACATACATACATGCAAAAATTCACTGACTGTACACTTAAGATCAATGCTTGTGGAATaGTTGGGGGTGTGGTGGGTA +
Preference number: 5 (lower is better)
Translates to: SCFRYIHTCKNSLTVHLRSMLVE*LGVWWV
Trigger: TACCCACCACACCCCCAACAATTCCACAAGCATTGA...TCTTAAGTGTACAGTCAGTGAATTTTTGCATGTATGTATGTACCTGAAGCAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000372979.9
CDS-3UTR CAA 90 bp TCTTGCTTCAGGTACATACATACATGCAAAAATTCACTGACTGTACACTTAAGATGCTCCTTCTCCTCCTaGGAAACAGACTCGGATTCT +
Preference number: 5 (lower is better)
Translates to: SCFRYIHTCKNSLTVHLRCSFSS*ETDSDS
Trigger: AGAATCCGAGTCTGTTTCCAAGGAGGAGAAGGAGCA...TCTTAAGTGTACAGTCAGTGAATTTTTGCATGTATGTATGTACCTGAAGCAAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372979.9
CDS-3UTR CAA 90 bp TCCAGATCATCAGAATCTGACTCATTAGGCCTTGGCCCTAAAATCTTATCAAAAATGCTTTGTAAAAGATaGGAAGCAGGTCCTGCCAGT +
Preference number: 5 (lower is better)
Translates to: SRSSESDSLGLGPKILSKMLCKR*EAGPAS
Trigger: ACTGGCAGGACCTGCTTCCAATCTTTTACAAAGCAT...TTTTGATAAGATTTTAGGGCCAAGGCCTAATGAGTCAGATTCTGATGATCTGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000484976.6
CDS-3UTR CAA 90 bp TCTTGCTTCAGGTACATACATACATGCAAAAATTCACTGACTGTACACTTAAGACTAGTGGTGAAACTTTaGCTGATGCAGGTGTGTGCT +
Preference number: 5 (lower is better)
Translates to: SCFRYIHTCKNSLTVHLRLVVKL*LMQVCA
Trigger: AGCACACACCTGCATCAGCAAAAGTTTCACCACTAG...TCTTAAGTGTACAGTCAGTGAATTTTTGCATGTATGTATGTACCTGAAGCAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372979.9
CDS-3UTR CAA 90 bp TCTTGCTTCAGGTACATACATACATGCAAAAATTCACTGACTGTACACTTAAGAGGATACAGGTTCCACTaGGTTCCTAGTGGTGAAACT +
Preference number: 5 (lower is better)
Translates to: SCFRYIHTCKNSLTVHLRGYRFH*VPSGET
Trigger: AGTTTCACCACTAGGAACCAAGTGGAACCTGTATCC...TCTTAAGTGTACAGTCAGTGAATTTTTGCATGTATGTATGTACCTGAAGCAAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372979.9
CDS-3UTR CAA 90 bp TCTTGCTTCAGGTACATACATACATGCAAAAATTCACTGACTGTACACTTAAGAGTTTATCTGAGTCCCTaGACTCATCTGGTATCAGGA +
Preference number: 5 (lower is better)
Translates to: SCFRYIHTCKNSLTVHLRVYLSP*THLVSG
Trigger: TCCTGATACCAGATGAGTCAAGGGACTCAGATAAAC...TCTTAAGTGTACAGTCAGTGAATTTTTGCATGTATGTATGTACCTGAAGCAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372979.9
CDS-3UTR CAA 90 bp TCTTGCTTCAGGTACATACATACATGCAAAAATTCACTGACTGTACACTTAAGAGTCTGGCACAAACCTTaGTTGCACCAATTGTGCATA +
Preference number: 5 (lower is better)
Translates to: SCFRYIHTCKNSLTVHLRVWHKP*LHQLCI
Trigger: TATGCACAATTGGTGCAACAAAGGTTTGTGCCAGAC...TCTTAAGTGTACAGTCAGTGAATTTTTGCATGTATGTATGTACCTGAAGCAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372979.9
CDS-3UTR CAA 90 bp TCTTGCTTCAGGTACATACATACATGCAAAAATTCACTGACTGTACACTTAAGAGTCACAAGGGATTTCTaGCAGTCAGAAAAATGTGGG +
Preference number: 5 (lower is better)
Translates to: SCFRYIHTCKNSLTVHLRVTRDF*QSEKCG
Trigger: CCCACATTTTTCTGACTGCAAGAAATCCCTTGTGAC...TCTTAAGTGTACAGTCAGTGAATTTTTGCATGTATGTATGTACCTGAAGCAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000372979.9
CDS-3UTR CAA 90 bp TCTTGCTTCAGGTACATACATACATGCAAAAATTCACTGACTGTACACTTAAGAATGCTTTGTAAAAGATaGGAAGCAGGTCCTGCCAGT +
Preference number: 5 (lower is better)
Translates to: SCFRYIHTCKNSLTVHLRMLCKR*EAGPAS
Trigger: ACTGGCAGGACCTGCTTCCAATCTTTTACAAAGCAT...TCTTAAGTGTACAGTCAGTGAATTTTTGCATGTATGTATGTACCTGAAGCAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372979.9
CDS-3UTR CAA 90 bp TCTTGCTTCAGGTACATACATACATGCAAAAATTCACTGACTGTACACTTAAGATTGTTGGCTTACTTGTaGGTCTGTGATCGGTGTTGT +
Preference number: 5 (lower is better)
Translates to: SCFRYIHTCKNSLTVHLRLLAYL*VCDRCC
Trigger: ACAACACCGATCACAGACCAACAAGTAAGCCAACAA...TCTTAAGTGTACAGTCAGTGAATTTTTGCATGTATGTATGTACCTGAAGCAAGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372979.9
CDS-3UTR CAA 90 bp TCTTGCTTCAGGTACATACATACATGCAAAAATTCACTGACTGTACACTTAAGATGTTATCCCCAAACTTaGTCACGCCAAACATATGAG +
Preference number: 5 (lower is better)
Translates to: SCFRYIHTCKNSLTVHLRCYPQT*SRQTYE
Trigger: CTCATATGTTTGGCGTGACAAAGTTTGGGGATAACA...TCTTAAGTGTACAGTCAGTGAATTTTTGCATGTATGTATGTACCTGAAGCAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372979.9
CDS-3UTR CAA 90 bp TCTTGCTTCAGGTACATACATACATGCAAAAATTCACTGACTGTACACTTAAGATGGGCCATGTATGACTaGAGATTATCAAGTGTTCCT +
Preference number: 5 (lower is better)
Translates to: SCFRYIHTCKNSLTVHLRWAMYD*RLSSVP
Trigger: AGGAACACTTGATAATCTCAAGTCATACATGGCCCA...TCTTAAGTGTACAGTCAGTGAATTTTTGCATGTATGTATGTACCTGAAGCAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372979.9
CDS-3UTR CAA 90 bp TCTTGCTTCAGGTACATACATACATGCAAAAATTCACTGACTGTACACTTAAGATCTTCCTCATCTGAATaGTTATCGGTAGTCTGGGAT +
Preference number: 5 (lower is better)
Translates to: SCFRYIHTCKNSLTVHLRSSSSE*LSVVWD
Trigger: ATCCCAGACTACCGATAACAATTCAGATGAGGAAGA...TCTTAAGTGTACAGTCAGTGAATTTTTGCATGTATGTATGTACCTGAAGCAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372979.9
CDS-3UTR CAA 90 bp TCTTGCTTCAGGTACATACATACATGCAAAAATTCACTGACTGTACACTTAAGATTTTTGTTGGCTTACTaGTTGGTCTGTGATCGGTGT +
Preference number: 5 (lower is better)
Translates to: SCFRYIHTCKNSLTVHLRFLLAY*LVCDRC
Trigger: ACACCGATCACAGACCAACAAGTAAGCCAACAAAAA...TCTTAAGTGTACAGTCAGTGAATTTTTGCATGTATGTATGTACCTGAAGCAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000372979.9
CDS-3UTR CAA 90 bp TCTTGCTTCAGGTACATACATACATGCAAAAATTCACTGACTGTACACTTAAGACAGAAAAATACCCTATaGGTGCTATTTTCAGGATCC +
Preference number: 5 (lower is better)
Translates to: SCFRYIHTCKNSLTVHLRQKNTL*VLFSGS
Trigger: GGATCCTGAAAATAGCACCAATAGGGTATTTTTCTG...TCTTAAGTGTACAGTCAGTGAATTTTTGCATGTATGTATGTACCTGAAGCAAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000372979.9
CDS-3UTR CAA 90 bp TCTTGCTTCAGGTACATACATACATGCAAAAATTCACTGACTGTACACTTAAGAGTGCTGGTTAATTTTTaGTTGGCTTACTTGTTGGTC +
Preference number: 5 (lower is better)
Translates to: SCFRYIHTCKNSLTVHLRVLVNF*LAYLLV
Trigger: GACCAACAAGTAAGCCAACAAAAAATTAACCAGCAC...TCTTAAGTGTACAGTCAGTGAATTTTTGCATGTATGTATGTACCTGAAGCAAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000372979.9
CDS-3UTR CAA 90 bp TCTTGCTTCAGGTACATACATACATGCAAAAATTCACTGACTGTACACTTAAGACATTGTCTTCAATCCTaGCTACTAACTCTGGAAATT +
Preference number: 5 (lower is better)
Translates to: SCFRYIHTCKNSLTVHLRHCLQS*LLTLEI
Trigger: AATTTCCAGAGTTAGTAGCAAGGATTGAAGACAATG...TCTTAAGTGTACAGTCAGTGAATTTTTGCATGTATGTATGTACCTGAAGCAAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372979.9
CDS-3UTR CAA 90 bp TCTTGCTTCAGGTACATACATACATGCAAAAATTCACTGACTGTACACTTAAGAAAGAATTCACCATCATaGTCTTCAATCCTTGCTACT +
Preference number: 5 (lower is better)
Translates to: SCFRYIHTCKNSLTVHLRKNSPS*SSILAT
Trigger: AGTAGCAAGGATTGAAGACAATGATGGTGAATTCTT...TCTTAAGTGTACAGTCAGTGAATTTTTGCATGTATGTATGTACCTGAAGCAAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372979.9
CDS-3UTR CAA 90 bp TCTTGCTTCAGGTACATACATACATGCAAAAATTCACTGACTGTACACTTAAGAAAATGTGGGCTACATTaGGAGCATAAGATCTCAAAT +
Preference number: 5 (lower is better)
Translates to: SCFRYIHTCKNSLTVHLRKCGLH*EHKISN
Trigger: ATTTGAGATCTTATGCTCCAAATGTAGCCCACATTT...TCTTAAGTGTACAGTCAGTGAATTTTTGCATGTATGTATGTACCTGAAGCAAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372979.9
CDS-3UTR CAA 90 bp TCTTGCTTCAGGTACATACATACATGCAAAAATTCACTGACTGTACACTTAAGAAGGATTCCAATATATTaGAAACCAGGTTCAGGTCTA +
Preference number: 5 (lower is better)
Translates to: SCFRYIHTCKNSLTVHLRRIPIY*KPGSGL
Trigger: TAGACCTGAACCTGGTTTCAAATATATTGGAATCCT...TCTTAAGTGTACAGTCAGTGAATTTTTGCATGTATGTATGTACCTGAAGCAAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372979.9
CDS TCA 72 bp GCACCTTTCCTTAGCCGCCTCTCCGACTGCGAGAGCTaGTCGAGAGCTGCCACCGGCCGCCGAAGCCTGGAT +
Preference number: 6 (lower is better)
Translates to: APFLSRLSDCES*SRAATGRRSLD
Trigger: ATCCAGGCTTCGGCGGCCGGTGGCAGCTCTCGATCAGCTCTCGCAGTCGGAGAGGCGGCTAAGGAAAGGTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000372979.9
ENST00000413026.1
ENST00000430082.6
ENST00000453402.5
ENST00000454759.6
CDS TCA 72 bp GCCGCCGAAGCCTGGATCAGGCTCTGTCCCGACGCCTaGCCGGAACCTGAAGCCAGCGGAAATCCTGAGAGA +
Preference number: 6 (lower is better)
Translates to: AAEAWIRLCPDA*PEPEASGNPER
Trigger: TCTCTCAGGATTTCCGCTGGCTTCAGGTTCCGGTCAGGCGTCGGGACAGAGCCTGATCCAGGCTTCGGCGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000413026.1
ENST00000430082.6
ENST00000453402.5
ENST00000454759.6
CDS CCA 72 bp CATGCCCAATTCATGGGCTCGGTACTGGGGATCAGATaGAGGAGGCAGCCTGTATCCACTCCGCCGGTCTGG +
Preference number: 6 (lower is better)
Translates to: HAQFMGSVLGIR*RRQPVSTPPVW
Trigger: CCAGACCGGCGGAGTGGATACAGGCTGCCTCCTCCATCTGATCCCCAGTACCGAGCCCATGAATTGGGCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372979.9
ENST00000430082.6
ENST00000484976.6
CDS GCA 72 bp AATGCCTGGACTGCTGCAGCCACCAATCTGGGGCGCTaGTTTAGCACTGCCACAATGCCAGCTGGAAGGAAG +
Preference number: 6 (lower is better)
Translates to: NAWTAAATNLGR*FSTATMPAGRK
Trigger: CTTCCTTCCAGCTGGCATTGTGGCAGTGCTAAAGCAGCGCCCCAGATTGGTGGCTGCAGCAGTCCAGGCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372979.9
ENST00000413026.1
ENST00000430082.6
ENST00000453402.5
ENST00000454759.6
CDS GCA 72 bp CCACCAATCTGGGGCGCTGCTTTAGCACTGCCACAATaGCAGCTGGAAGGAAGCAGTGTGCTCGATGAAGTG +
Preference number: 6 (lower is better)
Translates to: PPIWGAALALPQ*QLEGSSVLDEV
Trigger: CACTTCATCGAGCACACTGCTTCCTTCCAGCTGGCATTGTGGCAGTGCTAAAGCAGCGCCCCAGATTGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372979.9
ENST00000413026.1
ENST00000430082.6
ENST00000453402.5
ENST00000454759.6
CDS CAA 72 bp GAGAGAAAGTCTGAAACCCACTCAGTCCCCGAAACCTaGTGTGTCGTCACTGCTGTGCGTCGGCGGGAGCAT +
Preference number: 6 (lower is better)
Translates to: ERKSETHSVPET*CVVTAVRRREH
Trigger: ATGCTCCCGCCGACGCACAGCAGTGACGACACACAAGGTTTCGGGGACTGAGTGGGTTTCAGACTTTCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000453402.5
CDS GCA 72 bp GATTCCGAAGCCTGTGGTCATAACCATCACACATACTaGCTCCCCACCTCTGCAATTAAGCACCAGAATCCA +
Preference number: 6 (lower is better)
Translates to: DSEACGHNHHTY*LPTSAIKHQNP
Trigger: TGGATTCTGGTGCTTAATTGCAGAGGTGGGGAGGCAGTATGTGTGATGGTTATGACCACAGGCTTCGGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000610256.1
CDS GCA 72 bp AGGCTGATTCTGCCAGATGTAGGGGACCAGCATAGGTaGAAACCGAGTGATTATTCTCTCAATGTACTTCTG +
Preference number: 6 (lower is better)
Translates to: RLILPDVGDQHR*KPSDYSLNVLL
Trigger: CAGAAGTACATTGAGAGAATAATCACTCGGTTTGCACCTATGCTGGTCCCCTACATCTGGCAGAATCAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372979.9
ENST00000413026.1
ENST00000430082.6
ENST00000454759.6
ENST00000610256.1
CDS CCA 72 bp GGGATTTCTTGCAGTCAGAAAAATGTGGGCTACATTTaGAGCATAAGATCTCAAATCCATGAGCCGATGTCA +
Preference number: 6 (lower is better)
Translates to: GISCSQKNVGYI*SIRSQIHEPMS
Trigger: TGACATCGGCTCATGGATTTGAGATCTTATGCTCCAAATGTAGCCCACATTTTTCTGACTGCAAGAAATCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000454759.6
CDS TCA 72 bp TCAATGTTATCCCCAAACTTTGTCACGCCAAACATATaGGCAGGAACACCTCCTTTCCCAGGTTTATATTTA +
Preference number: 6 (lower is better)
Translates to: SMLSPNFVTPNI*AGTPPFPGLYL
Trigger: TAAATATAAACCTGGGAAAGGAGGTGTTCCTGCTCATATGTTTGGCGTGACAAAGTTTGGGGATAACATTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000372979.9
ENST00000413026.1
ENST00000430082.6
ENST00000454759.6
ENST00000610256.1
CDS CCA 72 bp GGGATTTCTTGCAGTCAGAAAAATGTGGGCTACATTTaGAGCATAAGATCTCAAATCCATGAGCCAATTTCA +
Preference number: 6 (lower is better)
Translates to: GISCSQKNVGYI*SIRSQIHEPIS
Trigger: TGAAATTGGCTCATGGATTTGAGATCTTATGCTCCAAATGTAGCCCACATTTTTCTGACTGCAAGAAATCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372979.9
ENST00000430082.6
ENST00000484976.6