Pregenerated sensors for EBPL (Homo sapiens)
Ensembl gene IDs: ENSG00000123179Ensembl transcript IDs: ENST00000378268.1
Found 4 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | CAATTCTCTAGATGTTTCCTAACACTAGTGGTAAACAGGAGTCCCCCACACAGACCCACTCAGCGCCCATaGTTCAGGCTTCCGACGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QFSRCFLTLVVNRSPPHRPTQRP*FRLPTP Trigger: TGGCGTCGGAAGCCTGAAGCATGGGCGCTGAGTGGG...TCTGTGTGGGGGACTCCTGTTTACCACTAGTGTTAGGAAACATCTAGAGAATTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378268.1 |
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| CDS-3UTR GCA 90 bp | TTCTCTAGATGTTTCCTAACACTAGTGGTAAACAGGAGTCCCCCACACAGATCCAGTGAGCCGAGATGGTaGCACTGTGCTCCAGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FSRCFLTLVVNRSPPHRSSEPRW*HCAPAW Trigger: CCAGGCTGGAGCACAGTGGCACCATCTCGGCTCACT...GGATCTGTGTGGGGGACTCCTGTTTACCACTAGTGTTAGGAAACATCTAGAGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000378268.1 |
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| CDS-3UTR TCA 90 bp | ACTAATGAGCCTACTCAATTCTCTAGATGTTTCCTAACACTAGTGGTAAACAGGAGGCGGAGCTTGCAGTaGGCCGAGATGGTGCCACTG | + |
|
Preference number: 4 (lower is better) Translates to: TNEPTQFSRCFLTLVVNRRRSLQ*AEMVPL Trigger: CAGTGGCACCATCTCGGCTCACTGCAAGCTCCGCCT...CCTGTTTACCACTAGTGTTAGGAAACATCTAGAGAATTGAGTAGGCTCATTAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378268.1 |
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| CDS-3UTR GCA 90 bp | ACTAATGAGCCTACTCAATTCTCTAGATGTTTCCTAACACTAGTGGTAAACAGGCTGGGAGGCGGAGCTTaGAGTGAGCCGAGATGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: TNEPTQFSRCFLTLVVNRLGGGA*SEPRWC Trigger: GCACCATCTCGGCTCACTGCAAGCTCCGCCTCCCAG...CCTGTTTACCACTAGTGTTAGGAAACATCTAGAGAATTGAGTAGGCTCATTAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000378268.1 |
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