Pregenerated sensors for EBI3 (Homo sapiens)
Ensembl gene IDs: ENSG00000105246Ensembl transcript IDs: ENST00000221847.6, ENST00000599339.1
Found 67 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTCTCAGCTAGAGAAACTGAGGCTCAAAGGGAAAAGTCGGTCATCTaGGGTTGCCCGGCAGCTCAGCAGCAGCAAAGCAAGGACTCCAGC | + |
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Preference number: 1 (lower is better) Translates to: FSARETEAQREKSVI*GCPAAQQQQSKDSS Trigger: GCTGGAGTCCTTGCTTTGCTGCTGCTGAGCTGCCGGGCAACCTCAGATGACCGACTTTTCCCTTTGAGCCTCAGTTTCTCTAGCTGAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000221847.6 |
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| 3UTR-3UTR GCA 90 bp | TGTGTGGCCCGGACTGGTTTCGAGCTCCTGGCCTCAAGCTACCCTCCCACGTCGTGGCGAGGACCCAGGTaGTGTCTGGAGGCAGCGGGA | + |
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Preference number: 2 (lower is better) Translates to: CVARTGFELLASSYPPTSWRGPR*CLEAAG Trigger: TCCCGCTGCCTCCAGACAGCACCTGGGTCCTCGCCA...CGACGTGGGAGGGTAGCTTGAGGCCAGGAGCTCGAAACCAGTCCGGGCCACACA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000221847.6 |
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| 3UTR-3UTR CCA 90 bp | GTCTTGCTGTGTGGCCCGGACTGGTTTCGAGCTCCTGGCCTCAAGCTACCCTCCTCCCGGGGCTTAGGGTaGCGAGGACCCAGGTGCTGT | + |
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Preference number: 2 (lower is better) Translates to: VLLCGPDWFRAPGLKLPSSRGLG*RGPRCC Trigger: ACAGCACCTGGGTCCTCGCCACCCTAAGCCCCGGGA...GGAGGGTAGCTTGAGGCCAGGAGCTCGAAACCAGTCCGGGCCACACAGCAAGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000221847.6 |
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| 3UTR-3UTR TCA 90 bp | TGGCCCGGACTGGTTTCGAGCTCCTGGCCTCAAGCTACCCTCCCACGTCGGCTTAAAAATATCTCACAGTaGCAGTTCAGTCAGCCCTGC | + |
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Preference number: 2 (lower is better) Translates to: WPGLVSSSWPQATLPRRLKNISQ*QFSQPC Trigger: GCAGGGCTGACTGAACTGTCACTGTGAGATATTTTT...AAGCCGACGTGGGAGGGTAGCTTGAGGCCAGGAGCTCGAAACCAGTCCGGGCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000221847.6 |
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| 3UTR CCA 72 bp | CCATCCGCCCTCCAACAGGTGTCCCGGGGCTTAGGGTaGCGAGGACCCAGGTGCTGTCTGGAGGCAGCGGGA | + |
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Preference number: 3 (lower is better) Translates to: PSALQQVSRGLG*RGPRCCLEAAG Trigger: TCCCGCTGCCTCCAGACAGCACCTGGGTCCTCGCCACCCTAAGCCCCGGGACACCTGTTGGAGGGCGGATGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000221847.6 |
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| 3UTR-3UTR CAA 90 bp | TGTGTGGCCCGGACTGGTTTCGAGCTCCTGGCCTCAAGCTACCCTCCCACGTCGGTCGGTCATCTGAGGTaGCCCGGCAGCTCAGCAGCA | + |
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Preference number: 3 (lower is better) Translates to: CVARTGFELLASSYPPTSVGHLR*PGSSAA Trigger: TGCTGCTGAGCTGCCGGGCAACCTCAGATGACCGAC...CGACGTGGGAGGGTAGCTTGAGGCCAGGAGCTCGAAACCAGTCCGGGCCACACA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000221847.6 |
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| 3UTR TCA 72 bp | AGAGAAACTGAGGCTCAAAGGGAAAAGTCGGTCATCTaGGGTTGCCCGGCAGCTCAGCAGCAGCAAAGCAAG | + |
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Preference number: 3 (lower is better) Translates to: RETEAQREKSVI*GCPAAQQQQSK Trigger: CTTGCTTTGCTGCTGCTGAGCTGCCGGGCAACCTCAGATGACCGACTTTTCCCTTTGAGCCTCAGTTTCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000221847.6 |
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| CDS-3UTR GCA 90 bp | CGCCCTCCAACAGGTGTCCCGGGGCTTAGGGTGGCGAGGACCCAGGTGCTGTCTCCGGGAGGCTCCCACTaGACCTGTAGCTGGCGCTCA | + |
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Preference number: 4 (lower is better) Translates to: RPPTGVPGLRVARTQVLSPGGSH*TCSWRS Trigger: TGAGCGCCAGCTACAGGTGCAGTGGGAGCCTCCCGG...AGACAGCACCTGGGTCCTCGCCACCCTAAGCCCCGGGACACCTGTTGGAGGGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000221847.6 |
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| CDS-3UTR CCA 90 bp | GCCCTCCAACAGGTGTCCCGGGGCTTAGGGTGGCGAGGACCCAGGTGCTGTCTGCTGGAGCCCCAGGGGTaGACGGCGGTGACATTGAGC | + |
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Preference number: 4 (lower is better) Translates to: ALQQVSRGLGWRGPRCCLLEPQG*TAVTLS Trigger: GCTCAATGTCACCGCCGTCCACCCCTGGGGCTCCAG...CAGACAGCACCTGGGTCCTCGCCACCCTAAGCCCCGGGACACCTGTTGGAGGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000221847.6 |
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| CDS-3UTR CCA 90 bp | GCTGTGTGGCCCGGACTGGTTTCGAGCTCCTGGCCTCAAGCTACCCTCCCACGTTGCAGGGCGGGCAGCTaGCCCAGAGGACAAGGGCCA | + |
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Preference number: 4 (lower is better) Translates to: AVWPGLVSSSWPQATLPRCRAGS*PRGQGP Trigger: TGGCCCTTGTCCTCTGGGCCAGCTGCCCGCCCTGCA...ACGTGGGAGGGTAGCTTGAGGCCAGGAGCTCGAAACCAGTCCGGGCCACACAGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000221847.6 |
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| CDS-3UTR TCA 90 bp | CGCCCTCCAACAGGTGTCCCGGGGCTTAGGGTGGCGAGGACCCAGGTGCTGTCTACAGCTGGACATCCGTaGTGGTGCAGCTGGTGGACG | + |
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Preference number: 4 (lower is better) Translates to: RPPTGVPGLRVARTQVLSTAGHP*WCSWWT Trigger: CGTCCACCAGCTGCACCATCACGGATGTCCAGCTGT...AGACAGCACCTGGGTCCTCGCCACCCTAAGCCCCGGGACACCTGTTGGAGGGCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000221847.6 |
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| CDS-3UTR GCA 90 bp | GTCTTGCTGTGTGGCCCGGACTGGTTTCGAGCTCCTGGCCTCAAGCTACCCTCCGGCCCCGGGCAGCCATaGCGAGCCTGTACGTGGCAA | + |
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Preference number: 4 (lower is better) Translates to: VLLCGPDWFRAPGLKLPSGPGQP*RACTWQ Trigger: TTGCCACGTACAGGCTCGGCATGGCTGCCCGGGGCC...GGAGGGTAGCTTGAGGCCAGGAGCTCGAAACCAGTCCGGGCCACACAGCAAGAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000221847.6 |
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| CDS-3UTR CCA 90 bp | CAAGCTACCCTCCCACGTCGGCTTCCCAGTGACTGGGATTACAGGTGCGATCCAAGGCAGGGCCAGCTGTaGCCCCGGGCAGCCATGCCG | + |
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Preference number: 4 (lower is better) Translates to: QATLPRRLPSDWDYRCDPRQGQL*PRAAMP Trigger: CGGCATGGCTGCCCGGGGCCACAGCTGGCCCTGCCT...TGGATCGCACCTGTAATCCCAGTCACTGGGAAGCCGACGTGGGAGGGTAGCTTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000221847.6 |
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| CDS-3UTR CCA 90 bp | TGGCCCGGACTGGTTTCGAGCTCCTGGCCTCAAGCTACCCTCCCACGTCGGCTTCTTGGACGTAGTACCTaGCTCGGGGCCGCACAGCCC | + |
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Preference number: 4 (lower is better) Translates to: WPGLVSSSWPQATLPRRLLGRST*LGAAQP Trigger: GGGCTGTGCGGCCCCGAGCCAGGTACTACGTCCAAG...AAGCCGACGTGGGAGGGTAGCTTGAGGCCAGGAGCTCGAAACCAGTCCGGGCCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000221847.6 |
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| CDS-3UTR CCA 90 bp | TGTGTGGCCCGGACTGGTTTCGAGCTCCTGGCCTCAAGCTACCCTCCCACGTCGTCCCGGGGCTTAGGGTaGCGAGGACCCAGGTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: CVARTGFELLASSYPPTSSRGLG*RGPRCC Trigger: ACAGCACCTGGGTCCTCGCCACCCTAAGCCCCGGGA...CGACGTGGGAGGGTAGCTTGAGGCCAGGAGCTCGAAACCAGTCCGGGCCACACA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000221847.6 |
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| CDS-3UTR GCA 90 bp | TGTGTGGCCCGGACTGGTTTCGAGCTCCTGGCCTCAAGCTACCCTCCCACGTCGGGGCAGTGTCAGAGCTaGTGGGGGCCCTTTCCTTCC | + |
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Preference number: 4 (lower is better) Translates to: CVARTGFELLASSYPPTSGQCQS*WGPFPS Trigger: GGAAGGAAAGGGCCCCCAGCAGCTCTGACACTGCCC...CGACGTGGGAGGGTAGCTTGAGGCCAGGAGCTCGAAACCAGTCCGGGCCACACA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000221847.6 |
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| CDS-3UTR GCA 90 bp | CATCTGAGGTTGCCCGGCAGCTCAGCAGCAGCAAAGCAAGGACTCCAGCCCAGGGACGTTGGCGTCTGCTaGAGGCAGGGCCAGCTGTGG | + |
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Preference number: 4 (lower is better) Translates to: HLRLPGSSAAAKQGLQPRDVGVC*RQGQLW Trigger: CCACAGCTGGCCCTGCCTGCAGCAGACGCCAACGTC...CCTGGGCTGGAGTCCTTGCTTTGCTGCTGCTGAGCTGCCGGGCAACCTCAGATG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000221847.6 |
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| CDS-3UTR GCA 90 bp | GTCTTGCTGTGTGGCCCGGACTGGTTTCGAGCTCCTGGCCTCAAGCTACCCTCCGTGGACGTTGGCGTCTaGTGCAGGCAGGGCCAGCTG | + |
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Preference number: 4 (lower is better) Translates to: VLLCGPDWFRAPGLKLPSVDVGV*CRQGQL Trigger: CAGCTGGCCCTGCCTGCAGCAGACGCCAACGTCCAC...GGAGGGTAGCTTGAGGCCAGGAGCTCGAAACCAGTCCGGGCCACACAGCAAGAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000221847.6 |
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| CDS-3UTR GCA 90 bp | CTTGCTGTGTGGCCCGGACTGGTTTCGAGCTCCTGGCCTCAAGCTACCCTCCCATGGCGAGGACCCAGGTaGTGTCTGGAGGCAGCGGGA | + |
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Preference number: 4 (lower is better) Translates to: LAVWPGLVSSSWPQATLPWRGPR*CLEAAG Trigger: TCCCGCTGCCTCCAGACAGCACCTGGGTCCTCGCCA...TGGGAGGGTAGCTTGAGGCCAGGAGCTCGAAACCAGTCCGGGCCACACAGCAAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000221847.6 |
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| CDS-3UTR TCA 90 bp | GTCTTGCTGTGTGGCCCGGACTGGTTTCGAGCTCCTGGCCTCAAGCTACCCTCCGCCTGTACGTGGCAATaGAGGACACGGGGCTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: VLLCGPDWFRAPGLKLPSACTWQ*RTRGWW Trigger: CCACCAGCCCCGTGTCCTTCATTGCCACGTACAGGC...GGAGGGTAGCTTGAGGCCAGGAGCTCGAAACCAGTCCGGGCCACACAGCAAGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000221847.6 |
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| CDS-3UTR GCA 90 bp | CAAGCTACCCTCCCACGTCGGCTTCCCAGTGACTGGGATTACAGGTGCGATCCAGCCCTTTCCTTCCACTaGAGGGCGGGCAGCTGGCCC | + |
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Preference number: 4 (lower is better) Translates to: QATLPRRLPSDWDYRCDPALSFH*RAGSWP Trigger: GGGCCAGCTGCCCGCCCTGCAGTGGAAGGAAAGGGC...TGGATCGCACCTGTAATCCCAGTCACTGGGAAGCCGACGTGGGAGGGTAGCTTG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000221847.6 |
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| CDS-3UTR GCA 90 bp | CTGAGGTTGCCCGGCAGCTCAGCAGCAGCAAAGCAAGGACTCCAGCCCAGGCTACGAGAGGCTCGGCATTaGACCCGGGGCAGTGTCAGA | + |
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Preference number: 4 (lower is better) Translates to: LRLPGSSAAAKQGLQPRLREARH*TRGSVR Trigger: TCTGACACTGCCCCGGGTGCAATGCCGAGCCTCTCG...TAGCCTGGGCTGGAGTCCTTGCTTTGCTGCTGCTGAGCTGCCGGGCAACCTCAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000221847.6 |
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| CDS-3UTR GCA 90 bp | CTTGCTGTGTGGCCCGGACTGGTTTCGAGCTCCTGGCCTCAAGCTACCCTCCCAAAGGCACGAAGCTGCTaGTGGAGCCCCAGGGGTGGA | + |
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Preference number: 4 (lower is better) Translates to: LAVWPGLVSSSWPQATLPKARSC*WSPRGG Trigger: TCCACCCCTGGGGCTCCAGCAGCAGCTTCGTGCCTT...TGGGAGGGTAGCTTGAGGCCAGGAGCTCGAAACCAGTCCGGGCCACACAGCAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000221847.6 |
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| CDS-3UTR CCA 90 bp | CTTGCTGTGTGGCCCGGACTGGTTTCGAGCTCCTGGCCTCAAGCTACCCTCCCACACTGCACCTGTAGCTaGCGCTCAGCGAGGGGGCTT | + |
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Preference number: 4 (lower is better) Translates to: LAVWPGLVSSSWPQATLPHCTCS*RSARGL Trigger: AAGCCCCCTCGCTGAGCGCCAGCTACAGGTGCAGTG...TGGGAGGGTAGCTTGAGGCCAGGAGCTCGAAACCAGTCCGGGCCACACAGCAAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000221847.6 |
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| CDS-3UTR CCA 90 bp | CATCTGAGGTTGCCCGGCAGCTCAGCAGCAGCAAAGCAAGGACTCCAGCCCAGGAGGACGTGGCTTCAATaGGCCCCACCCGGTGGAAGC | + |
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Preference number: 4 (lower is better) Translates to: HLRLPGSSAAAKQGLQPRRTWLQ*APPGGS Trigger: GCTTCCACCGGGTGGGGCCCATTGAAGCCACGTCCT...CCTGGGCTGGAGTCCTTGCTTTGCTGCTGCTGAGCTGCCGGGCAACCTCAGATG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000221847.6 |
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| CDS-3UTR CCA 90 bp | CTTGCTGTGTGGCCCGGACTGGTTTCGAGCTCCTGGCCTCAAGCTACCCTCCCATGCCCAGGCTCATTGTaGCAGTGGCGGGGAGACTCC | + |
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Preference number: 4 (lower is better) Translates to: LAVWPGLVSSSWPQATLPCPGSL*QWRGDS Trigger: GGAGTCTCCCCGCCACTGCCACAATGAGCCTGGGCA...TGGGAGGGTAGCTTGAGGCCAGGAGCTCGAAACCAGTCCGGGCCACACAGCAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000221847.6 |
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| CDS-3UTR CCA 90 bp | TGGCCCGGACTGGTTTCGAGCTCCTGGCCTCAAGCTACCCTCCCACGTCGGCTTCAGTGTCAGAGCTGCTaGGGGCCCTTTCCTTCCACT | + |
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Preference number: 4 (lower is better) Translates to: WPGLVSSSWPQATLPRRLQCQSC*GPFPST Trigger: AGTGGAAGGAAAGGGCCCCCAGCAGCTCTGACACTG...AAGCCGACGTGGGAGGGTAGCTTGAGGCCAGGAGCTCGAAACCAGTCCGGGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000221847.6 |
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| CDS-3UTR CCA 90 bp | CAAGCTACCCTCCCACGTCGGCTTCCCAGTGACTGGGATTACAGGTGCGATCCAGGGGCTGGTGGAGTTTaGAGCAGGCGGCAGGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: QATLPRRLPSDWDYRCDPGAGGV*SRRQGP Trigger: TGGACCCTGCCGCCTGCTCCAAACTCCACCAGCCCC...TGGATCGCACCTGTAATCCCAGTCACTGGGAAGCCGACGTGGGAGGGTAGCTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000221847.6 |
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| CDS-3UTR GCA 90 bp | GCTGTGTGGCCCGGACTGGTTTCGAGCTCCTGGCCTCAAGCTACCCTCCCACGTGAAGCCCTTGCTACTTaGCCAGGCTCATTGTGGCAG | + |
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Preference number: 4 (lower is better) Translates to: AVWPGLVSSSWPQATLPREALAT*PGSLWQ Trigger: CTGCCACAATGAGCCTGGGCAAGTAGCAAGGGCTTC...ACGTGGGAGGGTAGCTTGAGGCCAGGAGCTCGAAACCAGTCCGGGCCACACAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000221847.6 |
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| CDS-3UTR GCA 90 bp | CATCTGAGGTTGCCCGGCAGCTCAGCAGCAGCAAAGCAAGGACTCCAGCCCAGGGCAGCGGGAAGCCCTTaGTACTTGCCCAGGCTCATT | + |
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Preference number: 4 (lower is better) Translates to: HLRLPGSSAAAKQGLQPRAAGSP*YLPRLI Trigger: AATGAGCCTGGGCAAGTAGCAAGGGCTTCCCGCTGC...CCTGGGCTGGAGTCCTTGCTTTGCTGCTGCTGAGCTGCCGGGCAACCTCAGATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000221847.6 |
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| CDS-3UTR CCA 90 bp | CATCTGAGGTTGCCCGGCAGCTCAGCAGCAGCAAAGCAAGGACTCCAGCCCAGGGCACGTAGGGAGCCATaGAGAACAGCTGGACATCCG | + |
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Preference number: 4 (lower is better) Translates to: HLRLPGSSAAAKQGLQPRARREP*RTAGHP Trigger: CGGATGTCCAGCTGTTCTCCATGGCTCCCTACGTGC...CCTGGGCTGGAGTCCTTGCTTTGCTGCTGCTGAGCTGCCGGGCAACCTCAGATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000221847.6 |
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| CDS-3UTR CCA 90 bp | AAGGGAAAAGTCGGTCATCTGAGGTTGCCCGGCAGCTCAGCAGCAGCAAAGCAAGCACGAAGCTGCTGCTaGAGCCCCAGGGGTGGACGG | + |
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Preference number: 4 (lower is better) Translates to: KGKVGHLRLPGSSAAAKQARSCC*SPRGGR Trigger: CCGTCCACCCCTGGGGCTCCAGCAGCAGCTTCGTGC...TTGCTTTGCTGCTGCTGAGCTGCCGGGCAACCTCAGATGACCGACTTTTCCCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000221847.6 |
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| CDS-3UTR CCA 90 bp | TGGCCCGGACTGGTTTCGAGCTCCTGGCCTCAAGCTACCCTCCCACGTCGGCTTCGGCTTCCCAGTGACTaGGATTACAGGTGCGATCCA | + |
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Preference number: 4 (lower is better) Translates to: WPGLVSSSWPQATLPRRLRLPSD*DYRCDP Trigger: TGGATCGCACCTGTAATCCCAGTCACTGGGAAGCCG...AAGCCGACGTGGGAGGGTAGCTTGAGGCCAGGAGCTCGAAACCAGTCCGGGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000221847.6 |
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| CDS-3UTR CCA 90 bp | CATCTGAGGTTGCCCGGCAGCTCAGCAGCAGCAAAGCAAGGACTCCAGCCCAGGCTGGTTTCGAGCTCCTaGCCTCAAGCTACCCTCCCA | + |
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Preference number: 4 (lower is better) Translates to: HLRLPGSSAAAKQGLQPRLVSSS*PQATLP Trigger: TGGGAGGGTAGCTTGAGGCCAGGAGCTCGAAACCAG...CCTGGGCTGGAGTCCTTGCTTTGCTGCTGCTGAGCTGCCGGGCAACCTCAGATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000221847.6 |
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| CDS-3UTR TCA 90 bp | CAAGCTACCCTCCCACGTCGGCTTCCCAGTGACTGGGATTACAGGTGCGATCCAGTTCCCCGTAGTCTGTaGGGTCCTGAGCCGCCACTT | + |
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Preference number: 4 (lower is better) Translates to: QATLPRRLPSDWDYRCDPVPRSL*GPEPPL Trigger: AAGTGGCGGCTCAGGACCTCACAGACTACGGGGAAC...TGGATCGCACCTGTAATCCCAGTCACTGGGAAGCCGACGTGGGAGGGTAGCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000221847.6 |
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| CDS-3UTR GCA 90 bp | CGCCCTCCAACAGGTGTCCCGGGGCTTAGGGTGGCGAGGACCCAGGTGCTGTCTCAGTTCAGTCAGCCCTaGACTGTGGTAAAGGTAAAG | + |
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Preference number: 4 (lower is better) Translates to: RPPTGVPGLRVARTQVLSQFSQP*TVVKVK Trigger: CTTTACCTTTACCACAGTGCAGGGCTGACTGAACTG...AGACAGCACCTGGGTCCTCGCCACCCTAAGCCCCGGGACACCTGTTGGAGGGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000221847.6 |
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| CDS-3UTR CCA 90 bp | AAGGGAAAAGTCGGTCATCTGAGGTTGCCCGGCAGCTCAGCAGCAGCAAAGCAAGAAGCTGCGGGGTCATaGCTGCGGCCAGCTCTGCTC | + |
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Preference number: 4 (lower is better) Translates to: KGKVGHLRLPGSSAAAKQEAAGS*LRPALL Trigger: GAGCAGAGCTGGCCGCAGCCATGACCCCGCAGCTTC...TTGCTTTGCTGCTGCTGAGCTGCCGGGCAACCTCAGATGACCGACTTTTCCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000221847.6 |
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| CDS-3UTR CCA 90 bp | AAGGGAAAAGTCGGTCATCTGAGGTTGCCCGGCAGCTCAGCAGCAGCAAAGCAAGCAGCTGGTGGACGTTaGCGTCTGCTGCAGGCAGGG | + |
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Preference number: 4 (lower is better) Translates to: KGKVGHLRLPGSSAAAKQAAGGR*RLLQAG Trigger: CCCTGCCTGCAGCAGACGCCAACGTCCACCAGCTGC...TTGCTTTGCTGCTGCTGAGCTGCCGGGCAACCTCAGATGACCGACTTTTCCCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000221847.6 |
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| CDS-3UTR CCA 90 bp | CATCTGAGGTTGCCCGGCAGCTCAGCAGCAGCAAAGCAAGGACTCCAGCCCAGGGCCATGGAGAACAGCTaGACATCCGTGATGGTGCAG | + |
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Preference number: 4 (lower is better) Translates to: HLRLPGSSAAAKQGLQPRAMENS*TSVMVQ Trigger: CTGCACCATCACGGATGTCCAGCTGTTCTCCATGGC...CCTGGGCTGGAGTCCTTGCTTTGCTGCTGCTGAGCTGCCGGGCAACCTCAGATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000221847.6 |
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| CDS-3UTR CCA 90 bp | CAAGCTACCCTCCCACGTCGGCTTCCCAGTGACTGGGATTACAGGTGCGATCCAGGCTCATTGTGGCAGTaGCGGGGAGACTCCAGTCAC | + |
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Preference number: 4 (lower is better) Translates to: QATLPRRLPSDWDYRCDPGSLWQ*RGDSSH Trigger: GTGACTGGAGTCTCCCCGCCACTGCCACAATGAGCC...TGGATCGCACCTGTAATCCCAGTCACTGGGAAGCCGACGTGGGAGGGTAGCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000221847.6 |
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| CDS-3UTR CCA 90 bp | CAAGCTACCCTCCCACGTCGGCTTCCCAGTGACTGGGATTACAGGTGCGATCCATGGGGTCTTGCTGTGTaGCCCGGACTGGTTTCGAGC | + |
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Preference number: 4 (lower is better) Translates to: QATLPRRLPSDWDYRCDPWGLAV*PGLVSS Trigger: GCTCGAAACCAGTCCGGGCCACACAGCAAGACCCCA...TGGATCGCACCTGTAATCCCAGTCACTGGGAAGCCGACGTGGGAGGGTAGCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000221847.6 |
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| CDS-3UTR CCA 90 bp | AAGGGAAAAGTCGGTCATCTGAGGTTGCCCGGCAGCTCAGCAGCAGCAAAGCAAAGGACACGGGGCTGGTaGAGTTTGGAGCAGGCGGCA | + |
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Preference number: 4 (lower is better) Translates to: KGKVGHLRLPGSSAAAKQRTRGW*SLEQAA Trigger: TGCCGCCTGCTCCAAACTCCACCAGCCCCGTGTCCT...TTGCTTTGCTGCTGCTGAGCTGCCGGGCAACCTCAGATGACCGACTTTTCCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000221847.6 |
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| CDS-3UTR TCA 90 bp | CTTGCTGTGTGGCCCGGACTGGTTTCGAGCTCCTGGCCTCAAGCTACCCTCCCAGATCCAGTACTTCAGTaGGAAGATCTCTGGGAAGGG | + |
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Preference number: 4 (lower is better) Translates to: LAVWPGLVSSSWPQATLPDPVLQ*EDLWEG Trigger: CCCTTCCCAGAGATCTTCTCACTGAAGTACTGGATC...TGGGAGGGTAGCTTGAGGCCAGGAGCTCGAAACCAGTCCGGGCCACACAGCAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000221847.6 |
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| CDS-3UTR GCA 90 bp | CTTGCTGTGTGGCCCGGACTGGTTTCGAGCTCCTGGCCTCAAGCTACCCTCCCATCGGGCTTGATGATGTaGTCTGTTATGAAAGGCACG | + |
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Preference number: 4 (lower is better) Translates to: LAVWPGLVSSSWPQATLPSGLMM*SVMKGT Trigger: CGTGCCTTTCATAACAGAGCACATCATCAAGCCCGA...TGGGAGGGTAGCTTGAGGCCAGGAGCTCGAAACCAGTCCGGGCCACACAGCAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000221847.6 |
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| CDS-3UTR TCA 90 bp | CAAGCTACCCTCCCACGTCGGCTTCCCAGTGACTGGGATTACAGGTGCGATCCAAAAAATATCTCACAGTaGCAGTTCAGTCAGCCCTGC | + |
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Preference number: 4 (lower is better) Translates to: QATLPRRLPSDWDYRCDPKNISQ*QFSQPC Trigger: GCAGGGCTGACTGAACTGTCACTGTGAGATATTTTT...TGGATCGCACCTGTAATCCCAGTCACTGGGAAGCCGACGTGGGAGGGTAGCTTG 53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000221847.6 |
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| CDS GCA 90 bp | GCTGCAGGCAGGGCCAGCTGTGGCCCCGGGCAGCCATGCCGAGCCTaGACAGGGTGGGGCTCGCTGAGCGCCTCAGGGAGTGCCTGTGGC | + |
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Preference number: 5 (lower is better) Translates to: AAGRASCGPGQPCRA*TGWGSLSASGSACG Trigger: GCCACAGGCACTCCCTGAGGCGCTCAGCGAGCCCCACCCTGTGCAGGCTCGGCATGGCTGCCCGGGGCCACAGCTGGCCCTGCCTGCAGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000599339.1 |
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| CDS CCA 90 bp | AGGGCCAGCTGTGGCCCCGGGCAGCCATGCCGAGCCTGCACAGGGTaGGGCTCGCTGAGCGCCTCAGGGAGTGCCTGTGGCCTCAGCACC | + |
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Preference number: 5 (lower is better) Translates to: RASCGPGQPCRACTG*GSLSASGSACGLST Trigger: GGTGCTGAGGCCACAGGCACTCCCTGAGGCGCTCAGCGAGCCCCACCCTGTGCAGGCTCGGCATGGCTGCCCGGGGCCACAGCTGGCCCT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000599339.1 |
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| CDS CCA 90 bp | AGCCTGCACAGGGTGGGGCTCGCTGAGCGCCTCAGGGAGTGCCTGTaGCCTCAGCACCTCCTACTGCCGGGCCTGACCCGGGACCCCAAG | + |
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Preference number: 5 (lower is better) Translates to: SLHRVGLAERLRECL*PQHLLLPGLTRDPK Trigger: CTTGGGGTCCCGGGTCAGGCCCGGCAGTAGGAGGTGCTGAGGCCACAGGCACTCCCTGAGGCGCTCAGCGAGCCCCACCCTGTGCAGGCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000599339.1 |
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| CDS GCA 90 bp | AACAGCTGGACATCCGTGATGGTGCAGCTGGTGGACGTTGGCGTCTaGTGCAGGCAGGGCCAGCTGTGGCCCCGGGCAGCCATGCCGAGC | + |
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Preference number: 5 (lower is better) Translates to: NSWTSVMVQLVDVGV*CRQGQLWPRAAMPS Trigger: GCTCGGCATGGCTGCCCGGGGCCACAGCTGGCCCTGCCTGCAGCAGACGCCAACGTCCACCAGCTGCACCATCACGGATGTCCAGCTGTT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000221847.6 ENST00000599339.1 |
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| CDS GCA 90 bp | GCCCTCCAACAGGTGTCCCGGGGCTTAGGGTGGCGAGGACCCAGGTaGTGTCTGGAGGCAGCGGGAAGCCCTTGCTACTTGCCCAGGCTC | + |
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Preference number: 5 (lower is better) Translates to: ALQQVSRGLGWRGPR*CLEAAGSPCYLPRL Trigger: GAGCCTGGGCAAGTAGCAAGGGCTTCCCGCTGCCTCCAGACAGCACCTGGGTCCTCGCCACCCTAAGCCCCGGGACACCTGTTGGAGGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000221847.6 |
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| CDS-3UTR CAA 90 bp | CTTGCTGTGTGGCCCGGACTGGTTTCGAGCTCCTGGCCTCAAGCTACCCTCCCACGGGGCTGGTGGAGTTaGGAGCAGGCGGCAGGGTCC | + |
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Preference number: 5 (lower is better) Translates to: LAVWPGLVSSSWPQATLPRGWWS*EQAAGS Trigger: GGACCCTGCCGCCTGCTCCAAACTCCACCAGCCCCG...TGGGAGGGTAGCTTGAGGCCAGGAGCTCGAAACCAGTCCGGGCCACACAGCAAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000221847.6 |
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| CDS-3UTR CAA 90 bp | AGGACTCCAGCCCAGGCTAGGCAGATCCCATCCGCCCTCCAACAGGTGTCCCGGTGCAGCTGGTGGACGTaGGCGTCTGCTGCAGGCAGG | + |
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Preference number: 5 (lower is better) Translates to: RTPAQARQIPSALQQVSRCSWWT*ASAAGR Trigger: CCTGCCTGCAGCAGACGCCAACGTCCACCAGCTGCA...CCGGGACACCTGTTGGAGGGCGGATGGGATCTGCCTAGCCTGGGCTGGAGTCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000221847.6 |
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| CDS GCA 90 bp | GTCCAGGAGCAATCCACGGCGATCGGGTACCGAGAGGCTCGGCATTaGACCCGGGGCAGTGTCAGAGCTGCTGGGGGCCCTTTCCTTCCA | + |
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Preference number: 5 (lower is better) Translates to: VQEQSTAIGYREARH*TRGSVRAAGGPFLP Trigger: TGGAAGGAAAGGGCCCCCAGCAGCTCTGACACTGCCCCGGGTGCAATGCCGAGCCTCTCGGTACCCGATCGCCGTGGATTGCTCCTGGAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000221847.6 |
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| CDS-3UTR CAA 90 bp | CTTGCTGTGTGGCCCGGACTGGTTTCGAGCTCCTGGCCTCAAGCTACCCTCCCACCGAGAGGCTCGGCATaGCACCCGGGGCAGTGTCAG | + |
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Preference number: 5 (lower is better) Translates to: LAVWPGLVSSSWPQATLPPRGSA*HPGQCQ Trigger: CTGACACTGCCCCGGGTGCAATGCCGAGCCTCTCGG...TGGGAGGGTAGCTTGAGGCCAGGAGCTCGAAACCAGTCCGGGCCACACAGCAAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000221847.6 |
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| CDS CCA 90 bp | GCCGAGCCTGTACGTGGCAATGAAGGACACGGGGCTGGTGGAGTTTaGAGCAGGCGGCAGGGTCCAGGAGCAATCCACGGCGATCGGGTA | + |
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Preference number: 5 (lower is better) Translates to: AEPVRGNEGHGAGGV*SRRQGPGAIHGDRV Trigger: TACCCGATCGCCGTGGATTGCTCCTGGACCCTGCCGCCTGCTCCAAACTCCACCAGCCCCGTGTCCTTCATTGCCACGTACAGGCTCGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000221847.6 |
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| CDS-3UTR CAA 90 bp | GCTGTGTGGCCCGGACTGGTTTCGAGCTCCTGGCCTCAAGCTACCCTCCCACGTACTTGCCCAGGCTCATaGTGGCAGTGGCGGGGAGAC | + |
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Preference number: 5 (lower is better) Translates to: AVWPGLVSSSWPQATLPRTCPGS*WQWRGD Trigger: GTCTCCCCGCCACTGCCACAATGAGCCTGGGCAAGT...ACGTGGGAGGGTAGCTTGAGGCCAGGAGCTCGAAACCAGTCCGGGCCACACAGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000221847.6 |
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| CDS CCA 90 bp | GTCTGGAGGCAGCGGGAAGCCCTTGCTACTTGCCCAGGCTCATTGTaGCAGTGGCGGGGAGACTCCAGTCACTCAGTTCCCCGTAGTCTG | + |
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Preference number: 5 (lower is better) Translates to: VWRQREALATCPGSL*QWRGDSSHSVPRSL Trigger: CAGACTACGGGGAACTGAGTGACTGGAGTCTCCCCGCCACTGCCACAATGAGCCTGGGCAAGTAGCAAGGGCTTCCCGCTGCCTCCAGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000221847.6 |
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| CDS-3UTR CAA 90 bp | CAAGCTACCCTCCCACGTCGGCTTCCCAGTGACTGGGATTACAGGTGCGATCCAGTCCTGAGCCGCCACTaGGACGTAGTACCTGGCTCG | + |
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Preference number: 5 (lower is better) Translates to: QATLPRRLPSDWDYRCDPVLSRH*DVVPGS Trigger: CGAGCCAGGTACTACGTCCAAGTGGCGGCTCAGGAC...TGGATCGCACCTGTAATCCCAGTCACTGGGAAGCCGACGTGGGAGGGTAGCTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000221847.6 |
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| CDS GCA 72 bp | AGGGCCAGCTGTGGCCCCGGGCAGCCATGCCGAGCCTaGACAGGGTGGGGCTCGCTGAGCGCCTCAGGGAGT | + |
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Preference number: 6 (lower is better) Translates to: RASCGPGQPCRA*TGWGSLSASGS Trigger: ACTCCCTGAGGCGCTCAGCGAGCCCCACCCTGTGCAGGCTCGGCATGGCTGCCCGGGGCCACAGCTGGCCCT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000599339.1 |
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| CDS CAA 72 bp | GCAATCCACGGCGATCGGGTACCGAGAGGCTCGGCATaGCACCCGGGGCAGTGTCAGAGCTGCTGGGGGCCC | + |
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Preference number: 6 (lower is better) Translates to: AIHGDRVPRGSA*HPGQCQSCWGP Trigger: GGGCCCCCAGCAGCTCTGACACTGCCCCGGGTGCAATGCCGAGCCTCTCGGTACCCGATCGCCGTGGATTGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000221847.6 |
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| CDS CAA 90 bp | GGTCCAGGAGCAATCCACGGCGATCGGGTACCGAGAGGCTCGGCATaGCACCCGGGGCAGTGTCAGAGCTGCTGGGGGCCCTTTCCTTCC | + |
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Preference number: 6 (lower is better) Translates to: GPGAIHGDRVPRGSA*HPGQCQSCWGPFPS Trigger: GGAAGGAAAGGGCCCCCAGCAGCTCTGACACTGCCCCGGGTGCAATGCCGAGCCTCTCGGTACCCGATCGCCGTGGATTGCTCCTGGACC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000221847.6 |
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| CDS GCA 72 bp | CAGGTGTCCCGGGGCTTAGGGTGGCGAGGACCCAGGTaGTGTCTGGAGGCAGCGGGAAGCCCTTGCTACTTG | + |
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Preference number: 6 (lower is better) Translates to: QVSRGLGWRGPR*CLEAAGSPCYL Trigger: CAAGTAGCAAGGGCTTCCCGCTGCCTCCAGACAGCACCTGGGTCCTCGCCACCCTAAGCCCCGGGACACCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000221847.6 |
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| CDS CAA 72 bp | CAGTTCCCCGTAGTCTGTGAGGTCCTGAGCCGCCACTaGGACGTAGTACCTGGCTCGGGGCCGCACAGCCCT | + |
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Preference number: 6 (lower is better) Translates to: QFPVVCEVLSRH*DVVPGSGPHSP Trigger: AGGGCTGTGCGGCCCCGAGCCAGGTACTACGTCCAAGTGGCGGCTCAGGACCTCACAGACTACGGGGAACTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000221847.6 |
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| CDS CAA 90 bp | CCAGTCACTCAGTTCCCCGTAGTCTGTGAGGTCCTGAGCCGCCACTaGGACGTAGTACCTGGCTCGGGGCCGCACAGCCCTGAGGATGAA | + |
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Preference number: 6 (lower is better) Translates to: PVTQFPVVCEVLSRH*DVVPGSGPHSPEDE Trigger: TTCATCCTCAGGGCTGTGCGGCCCCGAGCCAGGTACTACGTCCAAGTGGCGGCTCAGGACCTCACAGACTACGGGGAACTGAGTGACTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000221847.6 |
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| CDS CAA 90 bp | GCTGTCTGGAGGCAGCGGGAAGCCCTTGCTACTTGCCCAGGCTCATaGTGGCAGTGGCGGGGAGACTCCAGTCACTCAGTTCCCCGTAGT | + |
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Preference number: 6 (lower is better) Translates to: AVWRQREALATCPGS*WQWRGDSSHSVPRS Trigger: ACTACGGGGAACTGAGTGACTGGAGTCTCCCCGCCACTGCCACAATGAGCCTGGGCAAGTAGCAAGGGCTTCCCGCTGCCTCCAGACAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000221847.6 |
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| CDS TCA 72 bp | GCACGTAGGGAGCCATGGAGAACAGCTGGACATCCGTaGTGGTGCAGCTGGTGGACGTTGGCGTCTGCTGCA | + |
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Preference number: 6 (lower is better) Translates to: ARREPWRTAGHP*WCSWWTLASAA Trigger: TGCAGCAGACGCCAACGTCCACCAGCTGCACCATCACGGATGTCCAGCTGTTCTCCATGGCTCCCTACGTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000221847.6 ENST00000599339.1 |
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| CDS TCA 72 bp | CGGGGAGACTCCAGTCACTCAGTTCCCCGTAGTCTGTaGGGTCCTGAGCCGCCACTTGGACGTAGTACCTGG | + |
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Preference number: 6 (lower is better) Translates to: RGDSSHSVPRSL*GPEPPLGRSTW Trigger: CCAGGTACTACGTCCAAGTGGCGGCTCAGGACCTCACAGACTACGGGGAACTGAGTGACTGGAGTCTCCCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000221847.6 |
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