RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EBF3 (Homo sapiens)

Ensembl gene IDs: ENSG00000108001

Ensembl transcript IDs: ENST00000355311.10, ENST00000368648.8, ENST00000440978.2, ENST00000675373.1, ENST00000682649.1

Found 427 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACCAGCAGTGATTTGGGTCCCCCTGAAACCTCTGTGAATCGGAGGTaGGCCCAGGAGGGTGCAGGACGCAGCAGAAATAGTCCCAGAAAG +
Preference number: 1 (lower is better)
Translates to: TSSDLGPPETSVNRR*AQEGAGRSRNSPRK
Trigger: CTTTCTGGGACTATTTCTGCTGCGTCCTGCACCCTCCTGGGCCCACCTCCGATTCACAGAGGTTTCAGGGGGACCCAAATCACTGCTGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
3UTR-3UTR TCA 90 bp ATAAGGACACAGCCCCAAACGGTGTCACCTCTTCGCGGCCGCTCCACATGCACACACAACACCAGGCCGTaGTCAAAAACCAATACAGAC +
Preference number: 2 (lower is better)
Translates to: IRTQPQTVSPLRGRSTCTHNTRP*SKTNTD
Trigger: GTCTGTATTGGTTTTTGATCACGGCCTGGTGTTGTG...TGTGCATGTGGAGCGGCCGCGAAGAGGTGACACCGTTTGGGGCTGTGTCCTTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
3UTR-3UTR TCA 90 bp GAGACAAGTTCTTGGCTAATGCTCTTCCCAGTATCACAACACCAGGCCGTGATCCTGAAGTCCGTCCTTTaGTGCTGGGTGCTGCGGAAG +
Preference number: 2 (lower is better)
Translates to: ETSSWLMLFPVSQHQAVILKSVL*CWVLRK
Trigger: CTTCCGCAGCACCCAGCATCAAAGGACGGACTTCAG...GATCACGGCCTGGTGTTGTGATACTGGGAAGAGCATTAGCCAAGAACTTGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
3UTR-3UTR CCA 90 bp ATAAGGACACAGCCCCAAACGGTGTCACCTCTTCGCGGCCGCTCCACATGCACAGCAGTGGGAGAATATTaGAACCAACAGACAGTAGCA +
Preference number: 2 (lower is better)
Translates to: IRTQPQTVSPLRGRSTCTAVGEY*NQQTVA
Trigger: TGCTACTGTCTGTTGGTTCCAATATTCTCCCACTGC...TGTGCATGTGGAGCGGCCGCGAAGAGGTGACACCGTTTGGGGCTGTGTCCTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
3UTR-3UTR TCA 90 bp GCACTAAGAGGCACGATATCTGAAGGAGGTCATTCCAGTTTTAAAAGTACGGACCTGAAGTCCGTCCTTTaGTGCTGGGTGCTGCGGAAG +
Preference number: 2 (lower is better)
Translates to: ALRGTISEGGHSSFKSTDLKSVL*CWVLRK
Trigger: CTTCCGCAGCACCCAGCATCAAAGGACGGACTTCAG...GTCCGTACTTTTAAAACTGGAATGACCTCCTTCAGATATCGTGCCTCTTAGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
3UTR-3UTR CCA 90 bp ATAAGGACACAGCCCCAAACGGTGTCACCTCTTCGCGGCCGCTCCACATGCACACAAAAGGACAATTTCTaGTACAAGAAACATAGACCT +
Preference number: 2 (lower is better)
Translates to: IRTQPQTVSPLRGRSTCTQKDNF*YKKHRP
Trigger: AGGTCTATGTTTCTTGTACCAGAAATTGTCCTTTTG...TGTGCATGTGGAGCGGCCGCGAAGAGGTGACACCGTTTGGGGCTGTGTCCTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
3UTR-3UTR TCA 90 bp GAAGGATCTAGAAGTCAAAAGGACAATTTCTGGTACAAGAAACATAGACCTCACCTGAAGTCCGTCCTTTaGTGCTGGGTGCTGCGGAAG +
Preference number: 2 (lower is better)
Translates to: EGSRSQKDNFWYKKHRPHLKSVL*CWVLRK
Trigger: CTTCCGCAGCACCCAGCATCAAAGGACGGACTTCAG...GTGAGGTCTATGTTTCTTGTACCAGAAATTGTCCTTTTGACTTCTAGATCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
3UTR-3UTR TCA 90 bp TTACTAGACATGGCCAAGACGGAGTCGGAAACTTTATACAAAATAGGCGTCGCTACTAAACGTGTCCCCTaGAGTCCGTCCTTTGATGCT +
Preference number: 2 (lower is better)
Translates to: LLDMAKTESETLYKIGVATKRVP*SPSFDA
Trigger: AGCATCAAAGGACGGACTTCAGGGGACACGTTTAGT...AGCGACGCCTATTTTGTATAAAGTTTCCGACTCCGTCTTGGCCATGTCTAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
3UTR-3UTR GCA 90 bp GAAGCTGGCAGGCGTTCTCAGTGCGTCCATGTGAGCTCTTTTGTAGATCAAACCTTTTCTCTGTCAGTGTaGTTGTTGAAGGCAAGAGAA +
Preference number: 2 (lower is better)
Translates to: EAGRRSQCVHVSSFVDQTFSLSV*LLKARE
Trigger: TTCTCTTGCCTTCAACAAGCACACTGACAGAGAAAA...GGTTTGATCTACAAAAGAGCTCACATGGACGCACTGAGAACGCCTGCCAGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
3UTR-3UTR TCA 90 bp GAGACAAGTTCTTGGCTAATGCTCTTCCCAGTATCACAACACCAGGCCGTGATCAAATGGAATTGTTCATaGAGAAGTAGGCTGTTTGCA +
Preference number: 2 (lower is better)
Translates to: ETSSWLMLFPVSQHQAVIKWNCS*RSRLFA
Trigger: TGCAAACAGCCTACTTCTTCATGAACAATTCCATTT...GATCACGGCCTGGTGTTGTGATACTGGGAAGAGCATTAGCCAAGAACTTGTCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
3UTR-3UTR TCA 90 bp TGGAGGCATTTTTCATCAGCGTTTCATGATCATCAAAATGGTGCATTCACAAAGACTAAACGTGTCCCCTaGAGTCCGTCCTTTGATGCT +
Preference number: 2 (lower is better)
Translates to: WRHFSSAFHDHQNGAFTKTKRVP*SPSFDA
Trigger: AGCATCAAAGGACGGACTTCAGGGGACACGTTTAGT...CTTTGTGAATGCACCATTTTGATGATCATGAAACGCTGATGAAAAATGCCTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
3UTR-3UTR TCA 90 bp CAAAGAGACAAGTTCTTGGCTAATGCTCTTCCCAGTATCACAACACCAGGCCGTAGTGCTAGCAAAAGTTaGAAAAATGTTGCAGATCAC +
Preference number: 2 (lower is better)
Translates to: QRDKFLANALPSITTPGRSASKS*KNVADH
Trigger: GTGATCTGCAACATTTTTTCAACTTTTGCTAGCACT...ACGGCCTGGTGTTGTGATACTGGGAAGAGCATTAGCCAAGAACTTGTCTCTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
3UTR-3UTR GCA 90 bp ATGCTCTTCCCAGTATCACAACACCAGGCCGTGATCAAAAACCAATACAGACAATTTTCTCTGTCAGTGTaGTTGTTGAAGGCAAGAGAA +
Preference number: 2 (lower is better)
Translates to: MLFPVSQHQAVIKNQYRQFSLSV*LLKARE
Trigger: TTCTCTTGCCTTCAACAAGCACACTGACAGAGAAAA...TTGTCTGTATTGGTTTTTGATCACGGCCTGGTGTTGTGATACTGGGAAGAGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
3UTR-3UTR CCA 90 bp ACATTAGGGAAGAAGGATCTAGAAGTCAAAAGGACAATTTCTGGTACAAGAAACGCAGTGGGAGAATATTaGAACCAACAGACAGTAGCA +
Preference number: 2 (lower is better)
Translates to: TLGKKDLEVKRTISGTRNAVGEY*NQQTVA
Trigger: TGCTACTGTCTGTTGGTTCCAATATTCTCCCACTGC...GTTTCTTGTACCAGAAATTGTCCTTTTGACTTCTAGATCCTTCTTCCCTAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
3UTR-3UTR TCA 90 bp GGATCTAGAAGTCAAAAGGACAATTTCTGGTACAAGAAACATAGACCTCACAGTAAATGGAATTGTTCATaGAGAAGTAGGCTGTTTGCA +
Preference number: 2 (lower is better)
Translates to: GSRSQKDNFWYKKHRPHSKWNCS*RSRLFA
Trigger: TGCAAACAGCCTACTTCTTCATGAACAATTCCATTT...ACTGTGAGGTCTATGTTTCTTGTACCAGAAATTGTCCTTTTGACTTCTAGATCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
3UTR-3UTR TCA 90 bp ACATTAGGGAAGAAGGATCTAGAAGTCAAAAGGACAATTTCTGGTACAAGAAACTGTCAGTGTGCTTGTTaGAGGCAAGAGAATTCAATA +
Preference number: 2 (lower is better)
Translates to: TLGKKDLEVKRTISGTRNCQCAC*RQENSI
Trigger: TATTGAATTCTCTTGCCTTCAACAAGCACACTGACA...GTTTCTTGTACCAGAAATTGTCCTTTTGACTTCTAGATCCTTCTTCCCTAATGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
3UTR CCA 72 bp GATTTGGGTCCCCCTGAAACCTCTGTGAATCGGAGGTaGGCCCAGGAGGGTGCAGGACGCAGCAGAAATAGT +
Preference number: 3 (lower is better)
Translates to: DLGPPETSVNRR*AQEGAGRSRNS
Trigger: ACTATTTCTGCTGCGTCCTGCACCCTCCTGGGCCCACCTCCGATTCACAGAGGTTTCAGGGGGACCCAAATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
3UTR-3UTR CAA 90 bp ATAAGGACACAGCCCCAAACGGTGTCACCTCTTCGCGGCCGCTCCACATGCACAAGCAGTGGGAGAATATaGGAACCAACAGACAGTAGC +
Preference number: 3 (lower is better)
Translates to: IRTQPQTVSPLRGRSTCTSSGRI*EPTDSS
Trigger: GCTACTGTCTGTTGGTTCCAATATTCTCCCACTGCT...TGTGCATGTGGAGCGGCCGCGAAGAGGTGACACCGTTTGGGGCTGTGTCCTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
3UTR-3UTR CAA 90 bp GAGACAAGTTCTTGGCTAATGCTCTTCCCAGTATCACAACACCAGGCCGTGATCCCTGAAGTCCGTCCTTaGATGCTGGGTGCTGCGGAA +
Preference number: 3 (lower is better)
Translates to: ETSSWLMLFPVSQHQAVIPEVRP*MLGAAE
Trigger: TTCCGCAGCACCCAGCATCAAAGGACGGACTTCAGG...GATCACGGCCTGGTGTTGTGATACTGGGAAGAGCATTAGCCAAGAACTTGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
3UTR-3UTR CAA 90 bp GAAGCTGGCAGGCGTTCTCAGTGCGTCCATGTGAGCTCTTTTGTAGATCAAACCAAACACCTGACACTTTaGGTCTCACTGTGGGTTTGG +
Preference number: 3 (lower is better)
Translates to: EAGRRSQCVHVSSFVDQTKHLTL*VSLWVW
Trigger: CCAAACCCACAGTGAGACCAAAAGTGTCAGGTGTTT...GGTTTGATCTACAAAAGAGCTCACATGGACGCACTGAGAACGCCTGCCAGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
3UTR-3UTR CAA 90 bp GACGGAGTCGGAAACTTTATACAAAATAGGCGTCGCTTTGTTTTCCTTATTCTTCCTGAAGTCCGTCCTTaGATGCTGGGTGCTGCGGAA +
Preference number: 3 (lower is better)
Translates to: DGVGNFIQNRRRFVFLILPEVRP*MLGAAE
Trigger: TTCCGCAGCACCCAGCATCAAAGGACGGACTTCAGG...AAGAATAAGGAAAACAAAGCGACGCCTATTTTGTATAAAGTTTCCGACTCCGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
3UTR-3UTR CAA 90 bp ACATTAGGGAAGAAGGATCTAGAAGTCAAAAGGACAATTTCTGGTACAAGAAACCCTGAAGTCCGTCCTTaGATGCTGGGTGCTGCGGAA +
Preference number: 3 (lower is better)
Translates to: TLGKKDLEVKRTISGTRNPEVRP*MLGAAE
Trigger: TTCCGCAGCACCCAGCATCAAAGGACGGACTTCAGG...GTTTCTTGTACCAGAAATTGTCCTTTTGACTTCTAGATCCTTCTTCCCTAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
3UTR-3UTR CAA 90 bp GCACTAAGAGGCACGATATCTGAAGGAGGTCATTCCAGTTTTAAAAGTACGGACATGGCTCATACCTCCTaGGCCCTCTTTTTATCACCA +
Preference number: 3 (lower is better)
Translates to: ALRGTISEGGHSSFKSTDMAHTS*ALFLSP
Trigger: TGGTGATAAAAAGAGGGCCAAGGAGGTATGAGCCAT...GTCCGTACTTTTAAAACTGGAATGACCTCCTTCAGATATCGTGCCTCTTAGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
3UTR GCA 72 bp ATTCGATTTCTGCTGCAGTTTGCAAAATGTTTGCTGTaGCGTGTCTGCAAAGCACTTAGTGCAAAGGAGAAA +
Preference number: 3 (lower is better)
Translates to: IRFLLQFAKCLL*RVCKALSAKEK
Trigger: TTTCTCCTTTGCACTAAGTGCTTTGCAGACACGGCACAGCAAACATTTTGCAAACTGCAGCAGAAATCGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
3UTR CCA 72 bp CATGCACAGAATCTACTAGGATTTGTCACGGCCGGGTaGCACCGATTTGTTTTGACTATACAACAAACTTTT +
Preference number: 3 (lower is better)
Translates to: HAQNLLGFVTAG*HRFVLTIQQTF
Trigger: AAAAGTTTGTTGTATAGTCAAAACAAATCGGTGCCACCCGGCCGTGACAAATCCTAGTAGATTCTGTGCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
3UTR-3UTR CAA 90 bp ACTTGCTTAACAGGAAGCTCTAGCAGTGGGAGAATATTGGAACCAACAGACAGTAAAATAGGCGTCGCTTaGTTTTCCTTATTCTTCAGG +
Preference number: 3 (lower is better)
Translates to: TCLTGSSSSGRILEPTDSKIGVA*FSLFFR
Trigger: CCTGAAGAATAAGGAAAACAAAGCGACGCCTATTTT...ACTGTCTGTTGGTTCCAATATTCTCCCACTGCTAGAGCTTCCTGTTAAGCAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
3UTR CCA 72 bp AGGGAAGAAGGATCTAGAAGTCAAAAGGACAATTTCTaGTACAAGAAACATAGACCTCACAGTAGCCTAAGA +
Preference number: 3 (lower is better)
Translates to: REEGSRSQKDNF*YKKHRPHSSLR
Trigger: TCTTAGGCTACTGTGAGGTCTATGTTTCTTGTACCAGAAATTGTCCTTTTGACTTCTAGATCCTTCTTCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp ATAAGGACACAGCCCCAAACGGTGTCACCTCTTCGCGGCCGCTCCACATGCACATCTGGGCGGCCGTGTTaGCGTCCACCACGCCCGCCG +
Preference number: 4 (lower is better)
Translates to: IRTQPQTVSPLRGRSTCTSGRPC*RPPRPP
Trigger: CGGCGGGCGTGGTGGACGCCAACACGGCCGCCCAGA...TGTGCATGTGGAGCGGCCGCGAAGAGGTGACACCGTTTGGGGCTGTGTCCTTAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR GCA 90 bp ATACTAAACGTGTCCCCTGAAGTCCGTCCTTTGATGCTGGGTGCTGCGGAAGGTGGCGGCGTCCGCGGCTaGAGGACACTGCGGGATCGC +
Preference number: 4 (lower is better)
Translates to: ILNVSPEVRPLMLGAAEGGGVRG*RTLRDR
Trigger: GCGATCCCGCAGTGTCCTGCAGCCGCGGACGCCGCC...ACCTTCCGCAGCACCCAGCATCAAAGGACGGACTTCAGGGGACACGTTTAGTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR GCA 90 bp ATAAGGACACAGCCCCAAACGGTGTCACCTCTTCGCGGCCGCTCCACATGCACAACTGCTGGGGAGTACTaGTGGGGACGTAGCCTCGCG +
Preference number: 4 (lower is better)
Translates to: IRTQPQTVSPLRGRSTCTTAGEY*WGRSLA
Trigger: CGCGAGGCTACGTCCCCAGCAGTACTCCCCAGCAGT...TGTGCATGTGGAGCGGCCGCGAAGAGGTGACACCGTTTGGGGCTGTGTCCTTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR GCA 90 bp ATACTAAACGTGTCCCCTGAAGTCCGTCCTTTGATGCTGGGTGCTGCGGAAGGTGCGGCTGCAGGACACTaGGGGATCGCCCGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: ILNVSPEVRPLMLGAAEGAAAGH*GIARFW
Trigger: CCAGAAGCGGGCGATCCCGCAGTGTCCTGCAGCCGC...ACCTTCCGCAGCACCCAGCATCAAAGGACGGACTTCAGGGGACACGTTTAGTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp GAGACAAGTTCTTGGCTAATGCTCTTCCCAGTATCACAACACCAGGCCGTGATCAGCCCCACGCCGCTCTaGGCGGCCGTGTTGGCGTCC +
Preference number: 4 (lower is better)
Translates to: ETSSWLMLFPVSQHQAVISPTPL*AAVLAS
Trigger: GGACGCCAACACGGCCGCCCAGAGCGGCGTGGGGCT...GATCACGGCCTGGTGTTGTGATACTGGGAAGAGCATTAGCCAAGAACTTGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp GGACACAGCCCCAAACGGTGTCACCTCTTCGCGGCCGCTCCACATGCACAGAATAACCAAGTGAGGGCATaGGGAAGCTGGCAGGCGTTC +
Preference number: 4 (lower is better)
Translates to: GHSPKRCHLFAAAPHAQNNQVRA*GSWQAF
Trigger: GAACGCCTGCCAGCTTCCCCATGCCCTCACTTGGTT...ATTCTGTGCATGTGGAGCGGCCGCGAAGAGGTGACACCGTTTGGGGCTGTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR GCA 90 bp ATAAGGACACAGCCCCAAACGGTGTCACCTCTTCGCGGCCGCTCCACATGCACATGTGTGCAGGGTTGTTaGCCAGGGTGGGGATCTGGT +
Preference number: 4 (lower is better)
Translates to: IRTQPQTVSPLRGRSTCTCVQGC*PGWGSG
Trigger: ACCAGATCCCCACCCTGGGCAACAACCCTGCACACA...TGTGCATGTGGAGCGGCCGCGAAGAGGTGACACCGTTTGGGGCTGTGTCCTTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR GCA 90 bp ATACTAAACGTGTCCCCTGAAGTCCGTCCTTTGATGCTGGGTGCTGCGGAAGGTGGTGACCGAAGAGGCTaGCATGGTGGGGCTGGACGG +
Preference number: 4 (lower is better)
Translates to: ILNVSPEVRPLMLGAAEGGDRRG*HGGAGR
Trigger: CCGTCCAGCCCCACCATGGCAGCCTCTTCGGTCACC...ACCTTCCGCAGCACCCAGCATCAAAGGACGGACTTCAGGGGACACGTTTAGTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355311.10
ENST00000440978.2
CDS-3UTR GCA 90 bp GAGACAAGTTCTTGGCTAATGCTCTTCCCAGTATCACAACACCAGGCCGTGATCGGCGCGGCCCGCCTGTaGCGCTCACTCGACGGACAT +
Preference number: 4 (lower is better)
Translates to: ETSSWLMLFPVSQHQAVIGAARL*RSLDGH
Trigger: ATGTCCGTCGAGTGAGCGGCACAGGCGGGCCGCGCC...GATCACGGCCTGGTGTTGTGATACTGGGAAGAGCATTAGCCAAGAACTTGTCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368648.8
CDS-3UTR CCA 90 bp CAAAGAGACAAGTTCTTGGCTAATGCTCTTCCCAGTATCACAACACCAGGCCGTGGGATCGCCCGCTTCTaGCGCGGCCCGCCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: QRDKFLANALPSITTPGRGIARF*RGPPAP
Trigger: TGGAGCAGGCGGGCCGCGCCAGAAGCGGGCGATCCC...ACGGCCTGGTGTTGTGATACTGGGAAGAGCATTAGCCAAGAACTTGTCTCTTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440978.2
CDS-3UTR CCA 90 bp GGACACAGCCCCAAACGGTGTCACCTCTTCGCGGCCGCTCCACATGCACAGAATCCCCTAGACTGGCCATaGCGCCACTTCCATATCCAT +
Preference number: 4 (lower is better)
Translates to: GHSPKRCHLFAAAPHAQNPLDWP*RHFHIH
Trigger: ATGGATATGGAAGTGGCGCCATGGCCAGTCTAGGGG...ATTCTGTGCATGTGGAGCGGCCGCGAAGAGGTGACACCGTTTGGGGCTGTGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp ATACTAAACGTGTCCCCTGAAGTCCGTCCTTTGATGCTGGGTGCTGCGGAAGGTCAGGCGCGCTCAACGTaGTGTCATCCTAGCCAGGCG +
Preference number: 4 (lower is better)
Translates to: ILNVSPEVRPLMLGAAEGQARST*CHPSQA
Trigger: CGCCTGGCTAGGATGACACCACGTTGAGCGCGCCTG...ACCTTCCGCAGCACCCAGCATCAAAGGACGGACTTCAGGGGACACGTTTAGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp AACGTGTCCCCTGAAGTCCGTCCTTTGATGCTGGGTGCTGCGGAAGGTAAACAGCATTCCCGTTGGCGCTaGTGCAGGAAGGAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: NVSPEVRPLMLGAAEGKQHSRWR*CRKEEE
Trigger: CTCCTCCTCCTTCCTGCACCAGCGCCAACGGGAATG...CTGTTTACCTTCCGCAGCACCCAGCATCAAAGGACGGACTTCAGGGGACACGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR GCA 90 bp GCACTAAGAGGCACGATATCTGAAGGAGGTCATTCCAGTTTTAAAAGTACGGACGGCGGCGTCCGCGGCTaGAGGACACTGCGGGATCGC +
Preference number: 4 (lower is better)
Translates to: ALRGTISEGGHSSFKSTDGGVRG*RTLRDR
Trigger: GCGATCCCGCAGTGTCCTGCAGCCGCGGACGCCGCC...GTCCGTACTTTTAAAACTGGAATGACCTCCTTCAGATATCGTGCCTCTTAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR GCA 90 bp ATACTAAACGTGTCCCCTGAAGTCCGTCCTTTGATGCTGGGTGCTGCGGAAGGTCCCAAACATGAAAACTaGTGGCGGCGGCCGCAGCTC +
Preference number: 4 (lower is better)
Translates to: ILNVSPEVRPLMLGAAEGPKHEN*WRRPQL
Trigger: GAGCTGCGGCCGCCGCCAGCAGTTTTCATGTTTGGG...ACCTTCCGCAGCACCCAGCATCAAAGGACGGACTTCAGGGGACACGTTTAGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR GCA 90 bp AACGTGTCCCCTGAAGTCCGTCCTTTGATGCTGGGTGCTGCGGAAGGTAAACAGCTCGCGGGGACACGCTaGTTGTATTGCGACTGTAGC +
Preference number: 4 (lower is better)
Translates to: NVSPEVRPLMLGAAEGKQLAGTR*LYCDCS
Trigger: GCTACAGTCGCAATACAAGCAGCGTGTCCCCGCGAG...CTGTTTACCTTCCGCAGCACCCAGCATCAAAGGACGGACTTCAGGGGACACGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR GCA 90 bp GAAGCTGGCAGGCGTTCTCAGTGCGTCCATGTGAGCTCTTTTGTAGATCAAACCACTGCTGGGGAGTACTaGTGGGGACGTAGCCTCGCG +
Preference number: 4 (lower is better)
Translates to: EAGRRSQCVHVSSFVDQTTAGEY*WGRSLA
Trigger: CGCGAGGCTACGTCCCCAGCAGTACTCCCCAGCAGT...GGTTTGATCTACAAAAGAGCTCACATGGACGCACTGAGAACGCCTGCCAGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR GCA 90 bp GGACACAGCCCCAAACGGTGTCACCTCTTCGCGGCCGCTCCACATGCACAGAATAAATGCCGTGTGTGCTaGTACAGTTTGAAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: GHSPKRCHLFAAAPHAQNKCRVC*YSLKGG
Trigger: CCCTCCCTTCAAACTGTAGCAGCACACACGGCATTT...ATTCTGTGCATGTGGAGCGGCCGCGAAGAGGTGACACCGTTTGGGGCTGTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440978.2
CDS-3UTR CCA 90 bp ACTTGCTTAACAGGAAGCTCTAGCAGTGGGAGAATATTGGAACCAACAGACAGTTCTGGGCGGCCGTGTTaGCGTCCACCACGCCCGCCG +
Preference number: 4 (lower is better)
Translates to: TCLTGSSSSGRILEPTDSSGRPC*RPPRPP
Trigger: CGGCGGGCGTGGTGGACGCCAACACGGCCGCCCAGA...ACTGTCTGTTGGTTCCAATATTCTCCCACTGCTAGAGCTTCCTGTTAAGCAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp TTACTAGACATGGCCAAGACGGAGTCGGAAACTTTATACAAAATAGGCGTCGCTAGCCCCACGCCGCTCTaGGCGGCCGTGTTGGCGTCC +
Preference number: 4 (lower is better)
Translates to: LLDMAKTESETLYKIGVASPTPL*AAVLAS
Trigger: GGACGCCAACACGGCCGCCCAGAGCGGCGTGGGGCT...AGCGACGCCTATTTTGTATAAAGTTTCCGACTCCGTCTTGGCCATGTCTAGTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp GGACACAGCCCCAAACGGTGTCACCTCTTCGCGGCCGCTCCACATGCACAGAATCCCGCCTCCCGTGTTTaGAATTGTTGTGCACAAACA +
Preference number: 4 (lower is better)
Translates to: GHSPKRCHLFAAAPHAQNPASRV*NCCAQT
Trigger: TGTTTGTGCACAACAATTCCAAACACGGGAGGCGGG...ATTCTGTGCATGTGGAGCGGCCGCGAAGAGGTGACACCGTTTGGGGCTGTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp ATACTAAACGTGTCCCCTGAAGTCCGTCCTTTGATGCTGGGTGCTGCGGAAGGTCAGGGACCCCTAGACTaGCCATGGCGCCACTTCCAT +
Preference number: 4 (lower is better)
Translates to: ILNVSPEVRPLMLGAAEGQGPLD*PWRHFH
Trigger: ATGGAAGTGGCGCCATGGCCAGTCTAGGGGTCCCTG...ACCTTCCGCAGCACCCAGCATCAAAGGACGGACTTCAGGGGACACGTTTAGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp ACTTGCTTAACAGGAAGCTCTAGCAGTGGGAGAATATTGGAACCAACAGACAGTGGAGGAGGAGAGGCTTaGGGCCGGACCACGGGCGCG +
Preference number: 4 (lower is better)
Translates to: TCLTGSSSSGRILEPTDSGGGEA*GRTTGA
Trigger: CGCGCCCGTGGTCCGGCCCCAAGCCTCTCCTCCTCC...ACTGTCTGTTGGTTCCAATATTCTCCCACTGCTAGAGCTTCCTGTTAAGCAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp ATACTAAACGTGTCCCCTGAAGTCCGTCCTTTGATGCTGGGTGCTGCGGAAGGTAGGGCATGGGGAAGCTaGCAGGCGTTCTCAGTGCGT +
Preference number: 4 (lower is better)
Translates to: ILNVSPEVRPLMLGAAEGRAWGS*QAFSVR
Trigger: ACGCACTGAGAACGCCTGCCAGCTTCCCCATGCCCT...ACCTTCCGCAGCACCCAGCATCAAAGGACGGACTTCAGGGGACACGTTTAGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR TCA 90 bp ATACTAAACGTGTCCCCTGAAGTCCGTCCTTTGATGCTGGGTGCTGCGGAAGGTCCTGAATCCCAAACATaGAAACTGCTGGCGGCGGCC +
Preference number: 4 (lower is better)
Translates to: ILNVSPEVRPLMLGAAEGPESQT*KLLAAA
Trigger: GGCCGCCGCCAGCAGTTTTCATGTTTGGGATTCAGG...ACCTTCCGCAGCACCCAGCATCAAAGGACGGACTTCAGGGGACACGTTTAGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR GCA 90 bp TTTCCATCAGCATGTCTTAATATACTAAACGTGTCCCCTGAAGTCCGTCCTTTGGGCGGCGTCCGCGGCTaGAGGACACTGCGGGATCGC +
Preference number: 4 (lower is better)
Translates to: FPSACLNILNVSPEVRPLGGVRG*RTLRDR
Trigger: GCGATCCCGCAGTGTCCTGCAGCCGCGGACGCCGCC...CAAAGGACGGACTTCAGGGGACACGTTTAGTATATTAAGACATGCTGATGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR GCA 90 bp TTACTAGACATGGCCAAGACGGAGTCGGAAACTTTATACAAAATAGGCGTCGCTACCACGCCCGCCGTGTaGATCCACGAGCGCACCGGG +
Preference number: 4 (lower is better)
Translates to: LLDMAKTESETLYKIGVATTPAV*IHERTG
Trigger: CCCGGTGCGCTCGTGGATGCACACGGCGGGCGTGGT...AGCGACGCCTATTTTGTATAAAGTTTCCGACTCCGTCTTGGCCATGTCTAGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR GCA 90 bp ATACTAAACGTGTCCCCTGAAGTCCGTCCTTTGATGCTGGGTGCTGCGGAAGGTCTCGCGGGGACACGCTaGTTGTATTGCGACTGTAGC +
Preference number: 4 (lower is better)
Translates to: ILNVSPEVRPLMLGAAEGLAGTR*LYCDCS
Trigger: GCTACAGTCGCAATACAAGCAGCGTGTCCCCGCGAG...ACCTTCCGCAGCACCCAGCATCAAAGGACGGACTTCAGGGGACACGTTTAGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR GCA 90 bp AACGTGTCCCCTGAAGTCCGTCCTTTGATGCTGGGTGCTGCGGAAGGTAAACAGAGCCCAGACATAGCTTaGAGTCCATTCCCGTTGGCG +
Preference number: 4 (lower is better)
Translates to: NVSPEVRPLMLGAAEGKQSPDIA*SPFPLA
Trigger: CGCCAACGGGAATGGACTGCAAGCTATGTCTGGGCT...CTGTTTACCTTCCGCAGCACCCAGCATCAAAGGACGGACTTCAGGGGACACGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355311.10
ENST00000368648.8
CDS-3UTR CCA 90 bp AACGTGTCCCCTGAAGTCCGTCCTTTGATGCTGGGTGCTGCGGAAGGTAAACAGGGGTCTGGACTCGGATaGCATGGGGAGTTATCAGCT +
Preference number: 4 (lower is better)
Translates to: NVSPEVRPLMLGAAEGKQGSGLG*HGELSA
Trigger: AGCTGATAACTCCCCATGCCATCCGAGTCCAGACCC...CTGTTTACCTTCCGCAGCACCCAGCATCAAAGGACGGACTTCAGGGGACACGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp AACGTGTCCCCTGAAGTCCGTCCTTTGATGCTGGGTGCTGCGGAAGGTAAACAGAGAAGTCCCTCACATTaGCGGGACTACCAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: NVSPEVRPLMLGAAEGKQRSPSH*RDYQPR
Trigger: TCTGGGCTGGTAGTCCCGCCAATGTGAGGGACTTCT...CTGTTTACCTTCCGCAGCACCCAGCATCAAAGGACGGACTTCAGGGGACACGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp ATAAGGACACAGCCCCAAACGGTGTCACCTCTTCGCGGCCGCTCCACATGCACATTTGTCACGGCCGGGTaGCACCGATTTGTTTTGACT +
Preference number: 4 (lower is better)
Translates to: IRTQPQTVSPLRGRSTCTFVTAG*HRFVLT
Trigger: AGTCAAAACAAATCGGTGCCACCCGGCCGTGACAAA...TGTGCATGTGGAGCGGCCGCGAAGAGGTGACACCGTTTGGGGCTGTGTCCTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp GAAGCTGGCAGGCGTTCTCAGTGCGTCCATGTGAGCTCTTTTGTAGATCAAACCAGGGCATGGGGAAGCTaGCAGGCGTTCTCAGTGCGT +
Preference number: 4 (lower is better)
Translates to: EAGRRSQCVHVSSFVDQTRAWGS*QAFSVR
Trigger: ACGCACTGAGAACGCCTGCCAGCTTCCCCATGCCCT...GGTTTGATCTACAAAAGAGCTCACATGGACGCACTGAGAACGCCTGCCAGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR TCA 90 bp GAAGCTGGCAGGCGTTCTCAGTGCGTCCATGTGAGCTCTTTTGTAGATCAAACCCCTGAATCCCAAACATaGAAACTGCTGGCGGCGGCC +
Preference number: 4 (lower is better)
Translates to: EAGRRSQCVHVSSFVDQTPESQT*KLLAAA
Trigger: GGCCGCCGCCAGCAGTTTTCATGTTTGGGATTCAGG...GGTTTGATCTACAAAAGAGCTCACATGGACGCACTGAGAACGCCTGCCAGCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR TCA 90 bp ATAAGGACACAGCCCCAAACGGTGTCACCTCTTCGCGGCCGCTCCACATGCACATCAGTCTTGAGACAGTaGAGTGATGTGGGCATTGAC +
Preference number: 4 (lower is better)
Translates to: IRTQPQTVSPLRGRSTCTSVLRQ*SDVGID
Trigger: GTCAATGCCCACATCACTTCACTGTCTCAAGACTGA...TGTGCATGTGGAGCGGCCGCGAAGAGGTGACACCGTTTGGGGCTGTGTCCTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR GCA 90 bp ACTTGCTTAACAGGAAGCTCTAGCAGTGGGAGAATATTGGAACCAACAGACAGTGCGGCTGCAGGACACTaGGGGATCGCCCGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: TCLTGSSSSGRILEPTDSAAAGH*GIARFW
Trigger: CCAGAAGCGGGCGATCCCGCAGTGTCCTGCAGCCGC...ACTGTCTGTTGGTTCCAATATTCTCCCACTGCTAGAGCTTCCTGTTAAGCAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR GCA 90 bp GGACACAGCCCCAAACGGTGTCACCTCTTCGCGGCCGCTCCACATGCACAGAATATCTCGAGGGTTGCCTaGATTCTTCAAACAGTTCTG +
Preference number: 4 (lower is better)
Translates to: GHSPKRCHLFAAAPHAQNISRVA*ILQTVL
Trigger: CAGAACTGTTTGAAGAATGCAGGCAACCCTCGAGAT...ATTCTGTGCATGTGGAGCGGCCGCGAAGAGGTGACACCGTTTGGGGCTGTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR GCA 90 bp ATACTAAACGTGTCCCCTGAAGTCCGTCCTTTGATGCTGGGTGCTGCGGAAGGTGGATCTGGTTGTGATTaGGGGGAACGCTGTACAGCG +
Preference number: 4 (lower is better)
Translates to: ILNVSPEVRPLMLGAAEGGSGCD*GERCTA
Trigger: CGCTGTACAGCGTTCCCCGCAATCACAACCAGATCC...ACCTTCCGCAGCACCCAGCATCAAAGGACGGACTTCAGGGGACACGTTTAGTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp TTTCCATCAGCATGTCTTAATATACTAAACGTGTCCCCTGAAGTCCGTCCTTTGAGGAGCAGGACGCGGTaGCCGCGGCGGCGCTTGTTG +
Preference number: 4 (lower is better)
Translates to: FPSACLNILNVSPEVRPLRSRTR*PRRRLL
Trigger: CAACAAGCGCCGCCGCGGCCACCGCGTCCTGCTCCT...CAAAGGACGGACTTCAGGGGACACGTTTAGTATATTAAGACATGCTGATGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp GCTAATGCTCTTCCCAGTATCACAACACCAGGCCGTGATCAAAAACCAATACAGTGCCTCGGCGGGGTCTaGACTCGGATGGCATGGGGA +
Preference number: 4 (lower is better)
Translates to: ANALPSITTPGRDQKPIQCLGGV*TRMAWG
Trigger: TCCCCATGCCATCCGAGTCCAGACCCCGCCGAGGCA...CTGTATTGGTTTTTGATCACGGCCTGGTGTTGTGATACTGGGAAGAGCATTAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR TCA 90 bp AACGTGTCCCCTGAAGTCCGTCCTTTGATGCTGGGTGCTGCGGAAGGTAAACAGGTTTCACTGCGGAGATaGCATTGGCAGGTGAGAATG +
Preference number: 4 (lower is better)
Translates to: NVSPEVRPLMLGAAEGKQVSLRR*HWQVRM
Trigger: CATTCTCACCTGCCAATGTCATCTCCGCAGTGAAAC...CTGTTTACCTTCCGCAGCACCCAGCATCAAAGGACGGACTTCAGGGGACACGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355311.10
ENST00000440978.2
CDS-3UTR GCA 90 bp GCTAATGCTCTTCCCAGTATCACAACACCAGGCCGTGATCAAAAACCAATACAGACGACGCCAGGAATGTaGCTCGGCGGGGTCTGGACT +
Preference number: 4 (lower is better)
Translates to: ANALPSITTPGRDQKPIQTTPGM*LGGVWT
Trigger: AGTCCAGACCCCGCCGAGGCACATTCCTGGCGTCGT...CTGTATTGGTTTTTGATCACGGCCTGGTGTTGTGATACTGGGAAGAGCATTAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR GCA 90 bp GAGACAAGTTCTTGGCTAATGCTCTTCCCAGTATCACAACACCAGGCCGTGATCCATCATGCCCGTGTGTaGAGGGTTGTTGCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: ETSSWLMLFPVSQHQAVIHHARV*RVVAQG
Trigger: ACCCTGGGCAACAACCCTGCACACACGGGCATGATG...GATCACGGCCTGGTGTTGTGATACTGGGAAGAGCATTAGCCAAGAACTTGTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR GCA 90 bp ATAAGGACACAGCCCCAAACGGTGTCACCTCTTCGCGGCCGCTCCACATGCACAGCAAAATGTTTGCTGTaGCGTGTCTGCAAAGCACTT +
Preference number: 4 (lower is better)
Translates to: IRTQPQTVSPLRGRSTCTAKCLL*RVCKAL
Trigger: AAGTGCTTTGCAGACACGGCACAGCAAACATTTTGC...TGTGCATGTGGAGCGGCCGCGAAGAGGTGACACCGTTTGGGGCTGTGTCCTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR GCA 90 bp CAAAGAGACAAGTTCTTGGCTAATGCTCTTCCCAGTATCACAACACCAGGCCGTCCCAGCAGAGAGCCTTaGAGTCCATTCCCGTTGGCG +
Preference number: 4 (lower is better)
Translates to: QRDKFLANALPSITTPGRPSREP*SPFPLA
Trigger: CGCCAACGGGAATGGACTGCAAGGCTCTCTGCTGGG...ACGGCCTGGTGTTGTGATACTGGGAAGAGCATTAGCCAAGAACTTGTCTCTTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440978.2
CDS-3UTR CCA 90 bp TGGAGGCATTTTTCATCAGCGTTTCATGATCATCAAAATGGTGCATTCACAAAGGGGATCGCCCGCTTCTaGCGCGGCCCGCCTGCTCCA +
Preference number: 4 (lower is better)
Translates to: WRHFSSAFHDHQNGAFTKGIARF*RGPPAP
Trigger: TGGAGCAGGCGGGCCGCGCCAGAAGCGGGCGATCCC...CTTTGTGAATGCACCATTTTGATGATCATGAAACGCTGATGAAAAATGCCTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355311.10
ENST00000440978.2
CDS-3UTR CCA 90 bp TGGAGGCATTTTTCATCAGCGTTTCATGATCATCAAAATGGTGCATTCACAAAGAGCCCCACGCCGCTCTaGGCGGCCGTGTTGGCGTCC +
Preference number: 4 (lower is better)
Translates to: WRHFSSAFHDHQNGAFTKSPTPL*AAVLAS
Trigger: GGACGCCAACACGGCCGCCCAGAGCGGCGTGGGGCT...CTTTGTGAATGCACCATTTTGATGATCATGAAACGCTGATGAAAAATGCCTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp GAAGCTGGCAGGCGTTCTCAGTGCGTCCATGTGAGCTCTTTTGTAGATCAAACCTGGACTCGGATGGCATaGGGAGTTATCAGCTCGCTC +
Preference number: 4 (lower is better)
Translates to: EAGRRSQCVHVSSFVDQTWTRMA*GVISSL
Trigger: GAGCGAGCTGATAACTCCCCATGCCATCCGAGTCCA...GGTTTGATCTACAAAAGAGCTCACATGGACGCACTGAGAACGCCTGCCAGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp ATAAGGACACAGCCCCAAACGGTGTCACCTCTTCGCGGCCGCTCCACATGCACAGCCGTAATCTATGGTTaGTTCATTAAGGGCGGTGTA +
Preference number: 4 (lower is better)
Translates to: IRTQPQTVSPLRGRSTCTAVIYG*FIKGGV
Trigger: TACACCGCCCTTAATGAACCAACCATAGATTACGGC...TGTGCATGTGGAGCGGCCGCGAAGAGGTGACACCGTTTGGGGCTGTGTCCTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp GAAGCTGGCAGGCGTTCTCAGTGCGTCCATGTGAGCTCTTTTGTAGATCAAACCGGTTGTTGCCCAGGGTaGGGATCTGGTTGTGATTGC +
Preference number: 4 (lower is better)
Translates to: EAGRRSQCVHVSSFVDQTGCCPG*GSGCDC
Trigger: GCAATCACAACCAGATCCCCACCCTGGGCAACAACC...GGTTTGATCTACAAAAGAGCTCACATGGACGCACTGAGAACGCCTGCCAGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp GAAGCTGGCAGGCGTTCTCAGTGCGTCCATGTGAGCTCTTTTGTAGATCAAACCACGTTGACGGCTAGCTaGCTGCTGAAGGAGTTGACG +
Preference number: 4 (lower is better)
Translates to: EAGRRSQCVHVSSFVDQTTLTAS*LLKELT
Trigger: CGTCAACTCCTTCAGCAGCCAGCTAGCCGTCAACGT...GGTTTGATCTACAAAAGAGCTCACATGGACGCACTGAGAACGCCTGCCAGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp GACGGAGTCGGAAACTTTATACAAAATAGGCGTCGCTTTGTTTTCCTTATTCTTGGAGGAGGAGAGGCTTaGGGCCGGACCACGGGCGCG +
Preference number: 4 (lower is better)
Translates to: DGVGNFIQNRRRFVFLILGGGEA*GRTTGA
Trigger: CGCGCCCGTGGTCCGGCCCCAAGCCTCTCCTCCTCC...AAGAATAAGGAAAACAAAGCGACGCCTATTTTGTATAAAGTTTCCGACTCCGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp GGATCTAGAAGTCAAAAGGACAATTTCTGGTACAAGAAACATAGACCTCACAGTGGAGGAGGAGAGGCTTaGGGCCGGACCACGGGCGCG +
Preference number: 4 (lower is better)
Translates to: GSRSQKDNFWYKKHRPHSGGGEA*GRTTGA
Trigger: CGCGCCCGTGGTCCGGCCCCAAGCCTCTCCTCCTCC...ACTGTGAGGTCTATGTTTCTTGTACCAGAAATTGTCCTTTTGACTTCTAGATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR TCA 90 bp AACGTGTCCCCTGAAGTCCGTCCTTTGATGCTGGGTGCTGCGGAAGGTAAACAGGAAAGAATCTGTCAATaGTTACAGGGTCTGAGGGCG +
Preference number: 4 (lower is better)
Translates to: NVSPEVRPLMLGAAEGKQERICQ*LQGLRA
Trigger: CGCCCTCAGACCCTGTAATCATTGACAGATTCTTTC...CTGTTTACCTTCCGCAGCACCCAGCATCAAAGGACGGACTTCAGGGGACACGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR GCA 90 bp GCTAATGCTCTTCCCAGTATCACAACACCAGGCCGTGATCAAAAACCAATACAGCCCAAACATGAAAACTaGTGGCGGCGGCCGCAGCTC +
Preference number: 4 (lower is better)
Translates to: ANALPSITTPGRDQKPIQPKHEN*WRRPQL
Trigger: GAGCTGCGGCCGCCGCCAGCAGTTTTCATGTTTGGG...CTGTATTGGTTTTTGATCACGGCCTGGTGTTGTGATACTGGGAAGAGCATTAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR GCA 90 bp ATGCTCTTCCCAGTATCACAACACCAGGCCGTGATCAAAAACCAATACAGACAAACGACGCCAGGAATGTaGCTCGGCGGGGTCTGGACT +
Preference number: 4 (lower is better)
Translates to: MLFPVSQHQAVIKNQYRQTTPGM*LGGVWT
Trigger: AGTCCAGACCCCGCCGAGGCACATTCCTGGCGTCGT...TTGTCTGTATTGGTTTTTGATCACGGCCTGGTGTTGTGATACTGGGAAGAGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR GCA 90 bp ACTTGCTTAACAGGAAGCTCTAGCAGTGGGAGAATATTGGAACCAACAGACAGTACTGCTGGGGAGTACTaGTGGGGACGTAGCCTCGCG +
Preference number: 4 (lower is better)
Translates to: TCLTGSSSSGRILEPTDSTAGEY*WGRSLA
Trigger: CGCGAGGCTACGTCCCCAGCAGTACTCCCCAGCAGT...ACTGTCTGTTGGTTCCAATATTCTCCCACTGCTAGAGCTTCCTGTTAAGCAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp ATAGGCGTCGCTTTGTTTTCCTTATTCTTCAGGACTGAGAAATGTGAAAATATGTCTGGGCGGCCGTGTTaGCGTCCACCACGCCCGCCG +
Preference number: 4 (lower is better)
Translates to: IGVALFSLFFRTEKCENMSGRPC*RPPRPP
Trigger: CGGCGGGCGTGGTGGACGCCAACACGGCCGCCCAGA...CATATTTTCACATTTCTCAGTCCTGAAGAATAAGGAAAACAAAGCGACGCCTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp TTTTCCAGTCTGATGGCTCATACCTCCTTGGCCCTCTTTTTATCACCACAAAAATGCCTCGGCGGGGTCTaGACTCGGATGGCATGGGGA +
Preference number: 4 (lower is better)
Translates to: FSSLMAHTSLALFLSPQKCLGGV*TRMAWG
Trigger: TCCCCATGCCATCCGAGTCCAGACCCCGCCGAGGCA...TTTTTGTGGTGATAAAAAGAGGGCCAAGGAGGTATGAGCCATCAGACTGGAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp AACGTGTCCCCTGAAGTCCGTCCTTTGATGCTGGGTGCTGCGGAAGGTAAACAGATCACCCGGATGTCTTaGGATCACTTTCTGCAACCT +
Preference number: 4 (lower is better)
Translates to: NVSPEVRPLMLGAAEGKQITRMS*DHFLQP
Trigger: AGGTTGCAGAAAGTGATCCCAAGACATCCGGGTGAT...CTGTTTACCTTCCGCAGCACCCAGCATCAAAGGACGGACTTCAGGGGACACGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp ATACTGTTTCCATCAGCATGTCTTAATATACTAAACGTGTCCCCTGAAGTCCGTGCTGGGGAGTACTGCTaGGGACGTAGCCTCGCGGGG +
Preference number: 4 (lower is better)
Translates to: ILFPSACLNILNVSPEVRAGEYC*GRSLAG
Trigger: CCCCGCGAGGCTACGTCCCCAGCAGTACTCCCCAGC...ACGGACTTCAGGGGACACGTTTAGTATATTAAGACATGCTGATGGAAACAGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp ACTTGCTTAACAGGAAGCTCTAGCAGTGGGAGAATATTGGAACCAACAGACAGTCTGCCATGGTGGGGCTaGACGGCACTATGCCGTAGG +
Preference number: 4 (lower is better)
Translates to: TCLTGSSSSGRILEPTDSLPWWG*TALCRR
Trigger: CCTACGGCATAGTGCCGTCCAGCCCCACCATGGCAG...ACTGTCTGTTGGTTCCAATATTCTCCCACTGCTAGAGCTTCCTGTTAAGCAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355311.10
ENST00000440978.2
CDS-3UTR CCA 90 bp AACGTGTCCCCTGAAGTCCGTCCTTTGATGCTGGGTGCTGCGGAAGGTAAACAGCACAGTTCAGCTATGTaGCAAAGTCAATGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: NVSPEVRPLMLGAAEGKQHSSAM*QSQWVA
Trigger: TGCCACCCATTGACTTTGCCACATAGCTGAACTGTG...CTGTTTACCTTCCGCAGCACCCAGCATCAAAGGACGGACTTCAGGGGACACGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR TCA 90 bp GCTAATGCTCTTCCCAGTATCACAACACCAGGCCGTGATCAAAAACCAATACAGCTGAAGTCCGTCCTTTaGTGCTGGGTGCTGCGGAAG +
Preference number: 4 (lower is better)
Translates to: ANALPSITTPGRDQKPIQLKSVL*CWVLRK
Trigger: CTTCCGCAGCACCCAGCATCAAAGGACGGACTTCAG...CTGTATTGGTTTTTGATCACGGCCTGGTGTTGTGATACTGGGAAGAGCATTAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR TCA 90 bp GAAGCTGGCAGGCGTTCTCAGTGCGTCCATGTGAGCTCTTTTGTAGATCAAACCACTAAACGTGTCCCCTaGAGTCCGTCCTTTGATGCT +
Preference number: 4 (lower is better)
Translates to: EAGRRSQCVHVSSFVDQTTKRVP*SPSFDA
Trigger: AGCATCAAAGGACGGACTTCAGGGGACACGTTTAGT...GGTTTGATCTACAAAAGAGCTCACATGGACGCACTGAGAACGCCTGCCAGCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR TCA 90 bp TTTCCATCAGCATGTCTTAATATACTAAACGTGTCCCCTGAAGTCCGTCCTTTGCCCCTGAAACCTCTGTaGATCGGAGGTGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: FPSACLNILNVSPEVRPLPLKPL*IGGGPR
Trigger: CCTGGGCCCACCTCCGATTCACAGAGGTTTCAGGGG...CAAAGGACGGACTTCAGGGGACACGTTTAGTATATTAAGACATGCTGATGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR TCA 90 bp TTTTCCAGTCTGATGGCTCATACCTCCTTGGCCCTCTTTTTATCACCACAAAAACCCCTGAAACCTCTGTaGATCGGAGGTGGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: FSSLMAHTSLALFLSPQKPLKPL*IGGGPR
Trigger: CCTGGGCCCACCTCCGATTCACAGAGGTTTCAGGGG...TTTTTGTGGTGATAAAAAGAGGGCCAAGGAGGTATGAGCCATCAGACTGGAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR TCA 90 bp GCTAATGCTCTTCCCAGTATCACAACACCAGGCCGTGATCAAAAACCAATACAGCACAAAGCCAGACTGTaGCCTGCTGACTCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: ANALPSITTPGRDQKPIQHKARL*PADSWG
Trigger: TCCCCAGGAGTCAGCAGGTCACAGTCTGGCTTTGTG...CTGTATTGGTTTTTGATCACGGCCTGGTGTTGTGATACTGGGAAGAGCATTAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR TCA 90 bp ATACTAAACGTGTCCCCTGAAGTCCGTCCTTTGATGCTGGGTGCTGCGGAAGGTTCAGTCTTGAGACAGTaGAGTGATGTGGGCATTGAC +
Preference number: 4 (lower is better)
Translates to: ILNVSPEVRPLMLGAAEGSVLRQ*SDVGID
Trigger: GTCAATGCCCACATCACTTCACTGTCTCAAGACTGA...ACCTTCCGCAGCACCCAGCATCAAAGGACGGACTTCAGGGGACACGTTTAGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR GCA 90 bp ACATTAGGGAAGAAGGATCTAGAAGTCAAAAGGACAATTTCTGGTACAAGAAACACCACGCCCGCCGTGTaGATCCACGAGCGCACCGGG +
Preference number: 4 (lower is better)
Translates to: TLGKKDLEVKRTISGTRNTTPAV*IHERTG
Trigger: CCCGGTGCGCTCGTGGATGCACACGGCGGGCGTGGT...GTTTCTTGTACCAGAAATTGTCCTTTTGACTTCTAGATCCTTCTTCCCTAATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR GCA 90 bp ATAGGCGTCGCTTTGTTTTCCTTATTCTTCAGGACTGAGAAATGTGAAAATATGACCACGCCCGCCGTGTaGATCCACGAGCGCACCGGG +
Preference number: 4 (lower is better)
Translates to: IGVALFSLFFRTEKCENMTTPAV*IHERTG
Trigger: CCCGGTGCGCTCGTGGATGCACACGGCGGGCGTGGT...CATATTTTCACATTTCTCAGTCCTGAAGAATAAGGAAAACAAAGCGACGCCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR GCA 90 bp AACGTGTCCCCTGAAGTCCGTCCTTTGATGCTGGGTGCTGCGGAAGGTAAACAGGCATATCTCGAGGGTTaGCTGCATTCTTCAAACAGT +
Preference number: 4 (lower is better)
Translates to: NVSPEVRPLMLGAAEGKQAYLEG*LHSSNS
Trigger: ACTGTTTGAAGAATGCAGGCAACCCTCGAGATATGC...CTGTTTACCTTCCGCAGCACCCAGCATCAAAGGACGGACTTCAGGGGACACGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR GCA 90 bp GCTAATGCTCTTCCCAGTATCACAACACCAGGCCGTGATCAAAAACCAATACAGCATCATGCCCGTGTGTaGAGGGTTGTTGCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: ANALPSITTPGRDQKPIQHHARV*RVVAQG
Trigger: ACCCTGGGCAACAACCCTGCACACACGGGCATGATG...CTGTATTGGTTTTTGATCACGGCCTGGTGTTGTGATACTGGGAAGAGCATTAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR GCA 90 bp ATACTGTTTCCATCAGCATGTCTTAATATACTAAACGTGTCCCCTGAAGTCCGTGGTGACCGAAGAGGCTaGCATGGTGGGGCTGGACGG +
Preference number: 4 (lower is better)
Translates to: ILFPSACLNILNVSPEVRGDRRG*HGGAGR
Trigger: CCGTCCAGCCCCACCATGGCAGCCTCTTCGGTCACC...ACGGACTTCAGGGGACACGTTTAGTATATTAAGACATGCTGATGGAAACAGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355311.10
ENST00000440978.2
CDS-3UTR GCA 90 bp AACGTGTCCCCTGAAGTCCGTCCTTTGATGCTGGGTGCTGCGGAAGGTAAACAGAGAAAATGCCGTGTGTaGTGCTACAGTTTGAAGGGA +
Preference number: 4 (lower is better)
Translates to: NVSPEVRPLMLGAAEGKQRKCRV*CYSLKG
Trigger: TCCCTTCAAACTGTAGCAGCACACACGGCATTTTCT...CTGTTTACCTTCCGCAGCACCCAGCATCAAAGGACGGACTTCAGGGGACACGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355311.10
ENST00000440978.2
CDS-3UTR CCA 90 bp ATAGGCGTCGCTTTGTTTTCCTTATTCTTCAGGACTGAGAAATGTGAAAATATGAGGAGCAGGACGCGGTaGCCGCGGCGGCGCTTGTTG +
Preference number: 4 (lower is better)
Translates to: IGVALFSLFFRTEKCENMRSRTR*PRRRLL
Trigger: CAACAAGCGCCGCCGCGGCCACCGCGTCCTGCTCCT...CATATTTTCACATTTCTCAGTCCTGAAGAATAAGGAAAACAAAGCGACGCCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp GAAGCTGGCAGGCGTTCTCAGTGCGTCCATGTGAGCTCTTTTGTAGATCAAACCCCCGCCTCCCGTGTTTaGAATTGTTGTGCACAAACA +
Preference number: 4 (lower is better)
Translates to: EAGRRSQCVHVSSFVDQTPASRV*NCCAQT
Trigger: TGTTTGTGCACAACAATTCCAAACACGGGAGGCGGG...GGTTTGATCTACAAAAGAGCTCACATGGACGCACTGAGAACGCCTGCCAGCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp GAAGGATCTAGAAGTCAAAAGGACAATTTCTGGTACAAGAAACATAGACCTCACGCTGGGGAGTACTGCTaGGGACGTAGCCTCGCGGGG +
Preference number: 4 (lower is better)
Translates to: EGSRSQKDNFWYKKHRPHAGEYC*GRSLAG
Trigger: CCCCGCGAGGCTACGTCCCCAGCAGTACTCCCCAGC...GTGAGGTCTATGTTTCTTGTACCAGAAATTGTCCTTTTGACTTCTAGATCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp GCACTAAGAGGCACGATATCTGAAGGAGGTCATTCCAGTTTTAAAAGTACGGACCATTCCCGTTGGCGCTaGTGCAGGAAGGAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: ALRGTISEGGHSSFKSTDHSRWR*CRKEEE
Trigger: CTCCTCCTCCTTCCTGCACCAGCGCCAACGGGAATG...GTCCGTACTTTTAAAACTGGAATGACCTCCTTCAGATATCGTGCCTCTTAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR TCA 90 bp TTTTCCAGTCTGATGGCTCATACCTCCTTGGCCCTCTTTTTATCACCACAAAAAAGCACCGGCTGCACATaGTCTCGTGGGTCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: FSSLMAHTSLALFLSPQKSTGCT*SRGSAA
Trigger: TGCTGCTGACCCACGAGATCATGTGCAGCCGGTGCT...TTTTTGTGGTGATAAAAAGAGGGCCAAGGAGGTATGAGCCATCAGACTGGAAAA
50% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR TCA 90 bp GAAGCTGGCAGGCGTTCTCAGTGCGTCCATGTGAGCTCTTTTGTAGATCAAACCGAAAGAATCTGTCAATaGTTACAGGGTCTGAGGGCG +
Preference number: 4 (lower is better)
Translates to: EAGRRSQCVHVSSFVDQTERICQ*LQGLRA
Trigger: CGCCCTCAGACCCTGTAATCATTGACAGATTCTTTC...GGTTTGATCTACAAAAGAGCTCACATGGACGCACTGAGAACGCCTGCCAGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR TCA 90 bp TTACTAGACATGGCCAAGACGGAGTCGGAAACTTTATACAAAATAGGCGTCGCTCACAAAGCCAGACTGTaGCCTGCTGACTCCTGGGGA +
Preference number: 4 (lower is better)
Translates to: LLDMAKTESETLYKIGVAHKARL*PADSWG
Trigger: TCCCCAGGAGTCAGCAGGTCACAGTCTGGCTTTGTG...AGCGACGCCTATTTTGTATAAAGTTTCCGACTCCGTCTTGGCCATGTCTAGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR GCA 90 bp ATACTAAACGTGTCCCCTGAAGTCCGTCCTTTGATGCTGGGTGCTGCGGAAGGTATCTCGAGGGTTGCCTaGATTCTTCAAACAGTTCTG +
Preference number: 4 (lower is better)
Translates to: ILNVSPEVRPLMLGAAEGISRVA*ILQTVL
Trigger: CAGAACTGTTTGAAGAATGCAGGCAACCCTCGAGAT...ACCTTCCGCAGCACCCAGCATCAAAGGACGGACTTCAGGGGACACGTTTAGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR GCA 90 bp TTACTAGACATGGCCAAGACGGAGTCGGAAACTTTATACAAAATAGGCGTCGCTTGTGTGCAGGGTTGTTaGCCAGGGTGGGGATCTGGT +
Preference number: 4 (lower is better)
Translates to: LLDMAKTESETLYKIGVACVQGC*PGWGSG
Trigger: ACCAGATCCCCACCCTGGGCAACAACCCTGCACACA...AGCGACGCCTATTTTGTATAAAGTTTCCGACTCCGTCTTGGCCATGTCTAGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp ATACTGTTTCCATCAGCATGTCTTAATATACTAAACGTGTCCCCTGAAGTCCGTCAGGCGCGCTCAACGTaGTGTCATCCTAGCCAGGCG +
Preference number: 4 (lower is better)
Translates to: ILFPSACLNILNVSPEVRQARST*CHPSQA
Trigger: CGCCTGGCTAGGATGACACCACGTTGAGCGCGCCTG...ACGGACTTCAGGGGACACGTTTAGTATATTAAGACATGCTGATGGAAACAGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp TTTCCATCAGCATGTCTTAATATACTAAACGTGTCCCCTGAAGTCCGTCCTTTGAAACATGAAAACTGCTaGCGGCGGCCGCAGCTCCCG +
Preference number: 4 (lower is better)
Translates to: FPSACLNILNVSPEVRPLKHENC*RRPQLP
Trigger: CGGGAGCTGCGGCCGCCGCCAGCAGTTTTCATGTTT...CAAAGGACGGACTTCAGGGGACACGTTTAGTATATTAAGACATGCTGATGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp GGATCTAGAAGTCAAAAGGACAATTTCTGGTACAAGAAACATAGACCTCACAGTTGCCTCGGCGGGGTCTaGACTCGGATGGCATGGGGA +
Preference number: 4 (lower is better)
Translates to: GSRSQKDNFWYKKHRPHSCLGGV*TRMAWG
Trigger: TCCCCATGCCATCCGAGTCCAGACCCCGCCGAGGCA...ACTGTGAGGTCTATGTTTCTTGTACCAGAAATTGTCCTTTTGACTTCTAGATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp ATACTAAACGTGTCCCCTGAAGTCCGTCCTTTGATGCTGGGTGCTGCGGAAGGTGCCGTAATCTATGGTTaGTTCATTAAGGGCGGTGTA +
Preference number: 4 (lower is better)
Translates to: ILNVSPEVRPLMLGAAEGAVIYG*FIKGGV
Trigger: TACACCGCCCTTAATGAACCAACCATAGATTACGGC...ACCTTCCGCAGCACCCAGCATCAAAGGACGGACTTCAGGGGACACGTTTAGTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp ATAGGCGTCGCTTTGTTTTCCTTATTCTTCAGGACTGAGAAATGTGAAAATATGGCTGGGGAGTACTGCTaGGGACGTAGCCTCGCGGGG +
Preference number: 4 (lower is better)
Translates to: IGVALFSLFFRTEKCENMAGEYC*GRSLAG
Trigger: CCCCGCGAGGCTACGTCCCCAGCAGTACTCCCCAGC...CATATTTTCACATTTCTCAGTCCTGAAGAATAAGGAAAACAAAGCGACGCCTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp TTTTCCAGTCTGATGGCTCATACCTCCTTGGCCCTCTTTTTATCACCACAAAAAGCAGTCCATTCCCGTTaGCGCTGGTGCAGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: FSSLMAHTSLALFLSPQKAVHSR*RWCRKE
Trigger: CTCCTTCCTGCACCAGCGCCAACGGGAATGGACTGC...TTTTTGTGGTGATAAAAAGAGGGCCAAGGAGGTATGAGCCATCAGACTGGAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp ACTTGCTTAACAGGAAGCTCTAGCAGTGGGAGAATATTGGAACCAACAGACAGTAACCAAGTGAGGGCATaGGGAAGCTGGCAGGCGTTC +
Preference number: 4 (lower is better)
Translates to: TCLTGSSSSGRILEPTDSNQVRA*GSWQAF
Trigger: GAACGCCTGCCAGCTTCCCCATGCCCTCACTTGGTT...ACTGTCTGTTGGTTCCAATATTCTCCCACTGCTAGAGCTTCCTGTTAAGCAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR TCA 90 bp GCTAATGCTCTTCCCAGTATCACAACACCAGGCCGTGATCAAAAACCAATACAGCGTGGCCGTCCACGTTaGCTGTTGTCGATACAACAA +
Preference number: 4 (lower is better)
Translates to: ANALPSITTPGRDQKPIQRGRPR*LLSIQQ
Trigger: TTGTTGTATCGACAACAGTCAACGTGGACGGCCACG...CTGTATTGGTTTTTGATCACGGCCTGGTGTTGTGATACTGGGAAGAGCATTAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR TCA 90 bp AACGTGTCCCCTGAAGTCCGTCCTTTGATGCTGGGTGCTGCGGAAGGTAAACAGTGTCAGTGTGCTTGTTaGAGGCAAGAGAATTCAATA +
Preference number: 4 (lower is better)
Translates to: NVSPEVRPLMLGAAEGKQCQCAC*RQENSI
Trigger: TATTGAATTCTCTTGCCTTCAACAAGCACACTGACA...CTGTTTACCTTCCGCAGCACCCAGCATCAAAGGACGGACTTCAGGGGACACGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR GCA 90 bp ATACTAAACGTGTCCCCTGAAGTCCGTCCTTTGATGCTGGGTGCTGCGGAAGGTGGAGTTTATAGTGGATaGCGTTGTTGGTTTTCTCGT +
Preference number: 4 (lower is better)
Translates to: ILNVSPEVRPLMLGAAEGGVYSG*RCWFSR
Trigger: ACGAGAAAACCAACAACGGCATCCACTATAAACTCC...ACCTTCCGCAGCACCCAGCATCAAAGGACGGACTTCAGGGGACACGTTTAGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR GCA 90 bp AACGTGTCCCCTGAAGTCCGTCCTTTGATGCTGGGTGCTGCGGAAGGTAAACAGGCGTTTCGTTTCTATTaGCACAACTTTTCTTGTCAC +
Preference number: 4 (lower is better)
Translates to: NVSPEVRPLMLGAAEGKQAFRFY*HNFSCH
Trigger: GTGACAAGAAAAGTTGTGGCAATAGAAACGAAACGC...CTGTTTACCTTCCGCAGCACCCAGCATCAAAGGACGGACTTCAGGGGACACGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR GCA 90 bp GGATCTAGAAGTCAAAAGGACAATTTCTGGTACAAGAAACATAGACCTCACAGTACGACGCCAGGAATGTaGCTCGGCGGGGTCTGGACT +
Preference number: 4 (lower is better)
Translates to: GSRSQKDNFWYKKHRPHSTTPGM*LGGVWT
Trigger: AGTCCAGACCCCGCCGAGGCACATTCCTGGCGTCGT...ACTGTGAGGTCTATGTTTCTTGTACCAGAAATTGTCCTTTTGACTTCTAGATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR GCA 90 bp ATGCTCTTCCCAGTATCACAACACCAGGCCGTGATCAAAAACCAATACAGACAAGGATCTGGTTGTGATTaGGGGGAACGCTGTACAGCG +
Preference number: 4 (lower is better)
Translates to: MLFPVSQHQAVIKNQYRQGSGCD*GERCTA
Trigger: CGCTGTACAGCGTTCCCCGCAATCACAACCAGATCC...TTGTCTGTATTGGTTTTTGATCACGGCCTGGTGTTGTGATACTGGGAAGAGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR GCA 90 bp GAGACAAGTTCTTGGCTAATGCTCTTCCCAGTATCACAACACCAGGCCGTGATCTTGCTGTGCCGTGTCTaGAAAGCACTTAGTGCAAAG +
Preference number: 4 (lower is better)
Translates to: ETSSWLMLFPVSQHQAVILLCRV*KALSAK
Trigger: CTTTGCACTAAGTGCTTTGCAGACACGGCACAGCAA...GATCACGGCCTGGTGTTGTGATACTGGGAAGAGCATTAGCCAAGAACTTGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp GAAGGATCTAGAAGTCAAAAGGACAATTTCTGGTACAAGAAACATAGACCTCACCAGGCGCGCTCAACGTaGTGTCATCCTAGCCAGGCG +
Preference number: 4 (lower is better)
Translates to: EGSRSQKDNFWYKKHRPHQARST*CHPSQA
Trigger: CGCCTGGCTAGGATGACACCACGTTGAGCGCGCCTG...GTGAGGTCTATGTTTCTTGTACCAGAAATTGTCCTTTTGACTTCTAGATCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp CAAAGAGACAAGTTCTTGGCTAATGCTCTTCCCAGTATCACAACACCAGGCCGTGGCCCTCGTAGACGATaGCCTGTTTGGTCATTGAAT +
Preference number: 4 (lower is better)
Translates to: QRDKFLANALPSITTPGRGPRRR*PVWSLN
Trigger: ATTCAATGACCAAACAGGCCATCGTCTACGAGGGCC...ACGGCCTGGTGTTGTGATACTGGGAAGAGCATTAGCCAAGAACTTGTCTCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp TTACTAGACATGGCCAAGACGGAGTCGGAAACTTTATACAAAATAGGCGTCGCTGGGTCTGGACTCGGATaGCATGGGGAGTTATCAGCT +
Preference number: 4 (lower is better)
Translates to: LLDMAKTESETLYKIGVAGSGLG*HGELSA
Trigger: AGCTGATAACTCCCCATGCCATCCGAGTCCAGACCC...AGCGACGCCTATTTTGTATAAAGTTTCCGACTCCGTCTTGGCCATGTCTAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp ATACTGTTTCCATCAGCATGTCTTAATATACTAAACGTGTCCCCTGAAGTCCGTCAGGGACCCCTAGACTaGCCATGGCGCCACTTCCAT +
Preference number: 4 (lower is better)
Translates to: ILFPSACLNILNVSPEVRQGPLD*PWRHFH
Trigger: ATGGAAGTGGCGCCATGGCCAGTCTAGGGGTCCCTG...ACGGACTTCAGGGGACACGTTTAGTATATTAAGACATGCTGATGGAAACAGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp TGGAGGCATTTTTCATCAGCGTTTCATGATCATCAAAATGGTGCATTCACAAAGCTGCCATGGTGGGGCTaGACGGCACTATGCCGTAGG +
Preference number: 4 (lower is better)
Translates to: WRHFSSAFHDHQNGAFTKLPWWG*TALCRR
Trigger: CCTACGGCATAGTGCCGTCCAGCCCCACCATGGCAG...CTTTGTGAATGCACCATTTTGATGATCATGAAACGCTGATGAAAAATGCCTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355311.10
ENST00000440978.2
CDS-3UTR CCA 90 bp ATGCTCTTCCCAGTATCACAACACCAGGCCGTGATCAAAAACCAATACAGACAAAGAAGTCCCTCACATTaGCGGGACTACCAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: MLFPVSQHQAVIKNQYRQRSPSH*RDYQPR
Trigger: TCTGGGCTGGTAGTCCCGCCAATGTGAGGGACTTCT...TTGTCTGTATTGGTTTTTGATCACGGCCTGGTGTTGTGATACTGGGAAGAGCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
3UTR CAA 72 bp CTTAATATACTAAACGTGTCCCCTGAAGTCCGTCCTTaGATGCTGGGTGCTGCGGAAGGTAAACAGAAGTCC +
Preference number: 4 (lower is better)
Translates to: LNILNVSPEVRP*MLGAAEGKQKS
Trigger: GGACTTCTGTTTACCTTCCGCAGCACCCAGCATCAAAGGACGGACTTCAGGGGACACGTTTAGTATATTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR TCA 90 bp GAGACAAGTTCTTGGCTAATGCTCTTCCCAGTATCACAACACCAGGCCGTGATCGGCCTGTTTGGTCATTaGATCTATGAGGCGAACATA +
Preference number: 4 (lower is better)
Translates to: ETSSWLMLFPVSQHQAVIGLFGH*IYEANI
Trigger: TATGTTCGCCTCATAGATTCAATGACCAAACAGGCC...GATCACGGCCTGGTGTTGTGATACTGGGAAGAGCATTAGCCAAGAACTTGTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR TCA 90 bp GAAGGATCTAGAAGTCAAAAGGACAATTTCTGGTACAAGAAACATAGACCTCACAGCACCGGCTGCACATaGTCTCGTGGGTCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: EGSRSQKDNFWYKKHRPHSTGCT*SRGSAA
Trigger: TGCTGCTGACCCACGAGATCATGTGCAGCCGGTGCT...GTGAGGTCTATGTTTCTTGTACCAGAAATTGTCCTTTTGACTTCTAGATCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR TCA 90 bp TGGAGGCATTTTTCATCAGCGTTTCATGATCATCAAAATGGTGCATTCACAAAGAGCACCGGCTGCACATaGTCTCGTGGGTCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: WRHFSSAFHDHQNGAFTKSTGCT*SRGSAA
Trigger: TGCTGCTGACCCACGAGATCATGTGCAGCCGGTGCT...CTTTGTGAATGCACCATTTTGATGATCATGAAACGCTGATGAAAAATGCCTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR TCA 90 bp AACGTGTCCCCTGAAGTCCGTCCTTTGATGCTGGGTGCTGCGGAAGGTAAACAGAAATGGAATTGTTCATaGAGAAGTAGGCTGTTTGCA +
Preference number: 4 (lower is better)
Translates to: NVSPEVRPLMLGAAEGKQKWNCS*RSRLFA
Trigger: TGCAAACAGCCTACTTCTTCATGAACAATTCCATTT...CTGTTTACCTTCCGCAGCACCCAGCATCAAAGGACGGACTTCAGGGGACACGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR GCA 90 bp GACGGAGTCGGAAACTTTATACAAAATAGGCGTCGCTTTGTTTTCCTTATTCTTCCCAAACATGAAAACTaGTGGCGGCGGCCGCAGCTC +
Preference number: 4 (lower is better)
Translates to: DGVGNFIQNRRRFVFLILPKHEN*WRRPQL
Trigger: GAGCTGCGGCCGCCGCCAGCAGTTTTCATGTTTGGG...AAGAATAAGGAAAACAAAGCGACGCCTATTTTGTATAAAGTTTCCGACTCCGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR GCA 90 bp ATACTAAACGTGTCCCCTGAAGTCCGTCCTTTGATGCTGGGTGCTGCGGAAGGTTTTTCTCTGTCAGTGTaGTTGTTGAAGGCAAGAGAA +
Preference number: 4 (lower is better)
Translates to: ILNVSPEVRPLMLGAAEGFSLSV*LLKARE
Trigger: TTCTCTTGCCTTCAACAAGCACACTGACAGAGAAAA...ACCTTCCGCAGCACCCAGCATCAAAGGACGGACTTCAGGGGACACGTTTAGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR GCA 90 bp TTACTAGACATGGCCAAGACGGAGTCGGAAACTTTATACAAAATAGGCGTCGCTCGCGGCCGCTCCACATaGACAGAATCTACTAGGATT +
Preference number: 4 (lower is better)
Translates to: LLDMAKTESETLYKIGVARGRST*TESTRI
Trigger: AATCCTAGTAGATTCTGTGCATGTGGAGCGGCCGCG...AGCGACGCCTATTTTGTATAAAGTTTCCGACTCCGTCTTGGCCATGTCTAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR GCA 90 bp TTACTAGACATGGCCAAGACGGAGTCGGAAACTTTATACAAAATAGGCGTCGCTAGGAGAGACGGGTCATaGAGCGGGCTTGTGCTTTTT +
Preference number: 4 (lower is better)
Translates to: LLDMAKTESETLYKIGVARRDGS*SGLVLF
Trigger: AAAAAGCACAAGCCCGCTGCATGACCCGTCTCTCCT...AGCGACGCCTATTTTGTATAAAGTTTCCGACTCCGTCTTGGCCATGTCTAGTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp GAAGGATCTAGAAGTCAAAAGGACAATTTCTGGTACAAGAAACATAGACCTCACAAACATGAAAACTGCTaGCGGCGGCCGCAGCTCCCG +
Preference number: 4 (lower is better)
Translates to: EGSRSQKDNFWYKKHRPHKHENC*RRPQLP
Trigger: CGGGAGCTGCGGCCGCCGCCAGCAGTTTTCATGTTT...GTGAGGTCTATGTTTCTTGTACCAGAAATTGTCCTTTTGACTTCTAGATCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp TTTTCCAGTCTGATGGCTCATACCTCCTTGGCCCTCTTTTTATCACCACAAAAAGGTTGTTGCCCAGGGTaGGGATCTGGTTGTGATTGC +
Preference number: 4 (lower is better)
Translates to: FSSLMAHTSLALFLSPQKGCCPG*GSGCDC
Trigger: GCAATCACAACCAGATCCCCACCCTGGGCAACAACC...TTTTTGTGGTGATAAAAAGAGGGCCAAGGAGGTATGAGCCATCAGACTGGAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp TTTCCATCAGCATGTCTTAATATACTAAACGTGTCCCCTGAAGTCCGTCCTTTGACGTTGACGGCTAGCTaGCTGCTGAAGGAGTTGACG +
Preference number: 4 (lower is better)
Translates to: FPSACLNILNVSPEVRPLTLTAS*LLKELT
Trigger: CGTCAACTCCTTCAGCAGCCAGCTAGCCGTCAACGT...CAAAGGACGGACTTCAGGGGACACGTTTAGTATATTAAGACATGCTGATGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp ATGCTCTTCCCAGTATCACAACACCAGGCCGTGATCAAAAACCAATACAGACAAAGCCGACTTGGTCGTTaGCTTGTGACGTCTCTGACA +
Preference number: 4 (lower is better)
Translates to: MLFPVSQHQAVIKNQYRQSRLGR*LVTSLT
Trigger: TGTCAGAGACGTCACAAGCCAACGACCAAGTCGGCT...TTGTCTGTATTGGTTTTTGATCACGGCCTGGTGTTGTGATACTGGGAAGAGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp GAAGGATCTAGAAGTCAAAAGGACAATTTCTGGTACAAGAAACATAGACCTCACAAGAGGCTGCCATGGTaGGGCTGGACGGCACTATGC +
Preference number: 4 (lower is better)
Translates to: EGSRSQKDNFWYKKHRPHKRLPW*GWTALC
Trigger: GCATAGTGCCGTCCAGCCCCACCATGGCAGCCTCTT...GTGAGGTCTATGTTTCTTGTACCAGAAATTGTCCTTTTGACTTCTAGATCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355311.10
ENST00000440978.2
CDS-3UTR CCA 90 bp TGGAGGCATTTTTCATCAGCGTTTCATGATCATCAAAATGGTGCATTCACAAAGAAGAGGCTGCCATGGTaGGGCTGGACGGCACTATGC +
Preference number: 4 (lower is better)
Translates to: WRHFSSAFHDHQNGAFTKKRLPW*GWTALC
Trigger: GCATAGTGCCGTCCAGCCCCACCATGGCAGCCTCTT...CTTTGTGAATGCACCATTTTGATGATCATGAAACGCTGATGAAAAATGCCTCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355311.10
ENST00000440978.2
CDS-3UTR CCA 90 bp GAAGGATCTAGAAGTCAAAAGGACAATTTCTGGTACAAGAAACATAGACCTCACGCAGTCCATTCCCGTTaGCGCTGGTGCAGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: EGSRSQKDNFWYKKHRPHAVHSR*RWCRKE
Trigger: CTCCTTCCTGCACCAGCGCCAACGGGAATGGACTGC...GTGAGGTCTATGTTTCTTGTACCAGAAATTGTCCTTTTGACTTCTAGATCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp GACGGAGTCGGAAACTTTATACAAAATAGGCGTCGCTTTGTTTTCCTTATTCTTGCAGTCCATTCCCGTTaGCGCTGGTGCAGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: DGVGNFIQNRRRFVFLILAVHSR*RWCRKE
Trigger: CTCCTTCCTGCACCAGCGCCAACGGGAATGGACTGC...AAGAATAAGGAAAACAAAGCGACGCCTATTTTGTATAAAGTTTCCGACTCCGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp GCTAATGCTCTTCCCAGTATCACAACACCAGGCCGTGATCAAAAACCAATACAGAAACCAGCAGTGATTTaGGTCCCCCTGAAACCTCTG +
Preference number: 4 (lower is better)
Translates to: ANALPSITTPGRDQKPIQKPAVI*VPLKPL
Trigger: CAGAGGTTTCAGGGGGACCCAAATCACTGCTGGTTT...CTGTATTGGTTTTTGATCACGGCCTGGTGTTGTGATACTGGGAAGAGCATTAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR TCA 90 bp GGATCTAGAAGTCAAAAGGACAATTTCTGGTACAAGAAACATAGACCTCACAGTCCTGAATCCCAAACATaGAAACTGCTGGCGGCGGCC +
Preference number: 4 (lower is better)
Translates to: GSRSQKDNFWYKKHRPHSPESQT*KLLAAA
Trigger: GGCCGCCGCCAGCAGTTTTCATGTTTGGGATTCAGG...ACTGTGAGGTCTATGTTTCTTGTACCAGAAATTGTCCTTTTGACTTCTAGATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR TCA 90 bp GAAGCTGGCAGGCGTTCTCAGTGCGTCCATGTGAGCTCTTTTGTAGATCAAACCTGGTCATTGAATCTATaGGGCGAACATACAGATCTT +
Preference number: 4 (lower is better)
Translates to: EAGRRSQCVHVSSFVDQTWSLNL*GEHTDL
Trigger: AAGATCTGTATGTTCGCCTCATAGATTCAATGACCA...GGTTTGATCTACAAAAGAGCTCACATGGACGCACTGAGAACGCCTGCCAGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR TCA 90 bp TTTTCCAGTCTGATGGCTCATACCTCCTTGGCCCTCTTTTTATCACCACAAAAACGTGGCCGTCCACGTTaGCTGTTGTCGATACAACAA +
Preference number: 4 (lower is better)
Translates to: FSSLMAHTSLALFLSPQKRGRPR*LLSIQQ
Trigger: TTGTTGTATCGACAACAGTCAACGTGGACGGCCACG...TTTTTGTGGTGATAAAAAGAGGGCCAAGGAGGTATGAGCCATCAGACTGGAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR TCA 90 bp GCTAATGCTCTTCCCAGTATCACAACACCAGGCCGTGATCAAAAACCAATACAGATCTCCTGGTTGTTGTaGGGCATTCCGTATAAGGCT +
Preference number: 4 (lower is better)
Translates to: ANALPSITTPGRDQKPIQISWLL*GIPYKA
Trigger: AGCCTTATACGGAATGCCTCACAACAACCAGGAGAT...CTGTATTGGTTTTTGATCACGGCCTGGTGTTGTGATACTGGGAAGAGCATTAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR TCA 90 bp TTTTCCAGTCTGATGGCTCATACCTCCTTGGCCCTCTTTTTATCACCACAAAAACCGCTCGCTTCAAGATaGTCTCCTGGTTGTTGTGAG +
Preference number: 4 (lower is better)
Translates to: FSSLMAHTSLALFLSPQKPLASR*SPGCCE
Trigger: CTCACAACAACCAGGAGATCATCTTGAAGCGAGCGG...TTTTTGTGGTGATAAAAAGAGGGCCAAGGAGGTATGAGCCATCAGACTGGAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR TCA 90 bp TTACTAGACATGGCCAAGACGGAGTCGGAAACTTTATACAAAATAGGCGTCGCTGTTTCACTGCGGAGATaGCATTGGCAGGTGAGAATG +
Preference number: 4 (lower is better)
Translates to: LLDMAKTESETLYKIGVAVSLRR*HWQVRM
Trigger: CATTCTCACCTGCCAATGTCATCTCCGCAGTGAAAC...AGCGACGCCTATTTTGTATAAAGTTTCCGACTCCGTCTTGGCCATGTCTAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355311.10
ENST00000440978.2
CDS-3UTR TCA 90 bp GGATCTAGAAGTCAAAAGGACAATTTCTGGTACAAGAAACATAGACCTCACAGTCTGAAGTCCGTCCTTTaGTGCTGGGTGCTGCGGAAG +
Preference number: 4 (lower is better)
Translates to: GSRSQKDNFWYKKHRPHSLKSVL*CWVLRK
Trigger: CTTCCGCAGCACCCAGCATCAAAGGACGGACTTCAG...ACTGTGAGGTCTATGTTTCTTGTACCAGAAATTGTCCTTTTGACTTCTAGATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR TCA 90 bp GACGGAGTCGGAAACTTTATACAAAATAGGCGTCGCTTTGTTTTCCTTATTCTTCTGAAGTCCGTCCTTTaGTGCTGGGTGCTGCGGAAG +
Preference number: 4 (lower is better)
Translates to: DGVGNFIQNRRRFVFLILLKSVL*CWVLRK
Trigger: CTTCCGCAGCACCCAGCATCAAAGGACGGACTTCAG...AAGAATAAGGAAAACAAAGCGACGCCTATTTTGTATAAAGTTTCCGACTCCGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR TCA 90 bp CAAAGAGACAAGTTCTTGGCTAATGCTCTTCCCAGTATCACAACACCAGGCCGTAAGAGGCACGATATCTaGAGGAGGTCATTCCAGTTT +
Preference number: 4 (lower is better)
Translates to: QRDKFLANALPSITTPGRKRHDI*RRSFQF
Trigger: AAACTGGAATGACCTCCTTCAGATATCGTGCCTCTT...ACGGCCTGGTGTTGTGATACTGGGAAGAGCATTAGCCAAGAACTTGTCTCTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR GCA 90 bp GCACTAAGAGGCACGATATCTGAAGGAGGTCATTCCAGTTTTAAAAGTACGGACGTTGTTGTTGTTGTTTaGAGGCGCGCTCAACGTGGT +
Preference number: 4 (lower is better)
Translates to: ALRGTISEGGHSSFKSTDVVVVV*RRAQRG
Trigger: ACCACGTTGAGCGCGCCTGCAAACAACAACAACAAC...GTCCGTACTTTTAAAACTGGAATGACCTCCTTCAGATATCGTGCCTCTTAGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR GCA 90 bp ATGCTCTTCCCAGTATCACAACACCAGGCCGTGATCAAAAACCAATACAGACAAGCCCAGGAGCACCTTTaGAGAACTGCTTGGATTTGT +
Preference number: 4 (lower is better)
Translates to: MLFPVSQHQAVIKNQYRQAQEHL*RTAWIC
Trigger: ACAAATCCAAGCAGTTCTGCAAAGGTGCTCCTGGGC...TTGTCTGTATTGGTTTTTGATCACGGCCTGGTGTTGTGATACTGGGAAGAGCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR GCA 90 bp GAAGGATCTAGAAGTCAAAAGGACAATTTCTGGTACAAGAAACATAGACCTCACCTCGCGGGGACACGCTaGTTGTATTGCGACTGTAGC +
Preference number: 4 (lower is better)
Translates to: EGSRSQKDNFWYKKHRPHLAGTR*LYCDCS
Trigger: GCTACAGTCGCAATACAAGCAGCGTGTCCCCGCGAG...GTGAGGTCTATGTTTCTTGTACCAGAAATTGTCCTTTTGACTTCTAGATCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR GCA 90 bp TTTCCATCAGCATGTCTTAATATACTAAACGTGTCCCCTGAAGTCCGTCCTTTGCGCGGCCGCTCCACATaGACAGAATCTACTAGGATT +
Preference number: 4 (lower is better)
Translates to: FPSACLNILNVSPEVRPLRGRST*TESTRI
Trigger: AATCCTAGTAGATTCTGTGCATGTGGAGCGGCCGCG...CAAAGGACGGACTTCAGGGGACACGTTTAGTATATTAAGACATGCTGATGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR GCA 90 bp TTTCCATCAGCATGTCTTAATATACTAAACGTGTCCCCTGAAGTCCGTCCTTTGGGCAGGCGTTCTCAGTaGGTCCATGTGAGCTCTTTT +
Preference number: 4 (lower is better)
Translates to: FPSACLNILNVSPEVRPLGRRSQ*VHVSSF
Trigger: AAAAGAGCTCACATGGACGCACTGAGAACGCCTGCC...CAAAGGACGGACTTCAGGGGACACGTTTAGTATATTAAGACATGCTGATGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp ATAGGCGTCGCTTTGTTTTCCTTATTCTTCAGGACTGAGAAATGTGAAAATATGAAACATGAAAACTGCTaGCGGCGGCCGCAGCTCCCG +
Preference number: 4 (lower is better)
Translates to: IGVALFSLFFRTEKCENMKHENC*RRPQLP
Trigger: CGGGAGCTGCGGCCGCCGCCAGCAGTTTTCATGTTT...CATATTTTCACATTTCTCAGTCCTGAAGAATAAGGAAAACAAAGCGACGCCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp ATACTGTTTCCATCAGCATGTCTTAATATACTAAACGTGTCCCCTGAAGTCCGTTGGACTCGGATGGCATaGGGAGTTATCAGCTCGCTC +
Preference number: 4 (lower is better)
Translates to: ILFPSACLNILNVSPEVRWTRMA*GVISSL
Trigger: GAGCGAGCTGATAACTCCCCATGCCATCCGAGTCCA...ACGGACTTCAGGGGACACGTTTAGTATATTAAGACATGCTGATGGAAACAGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp ACATTAGGGAAGAAGGATCTAGAAGTCAAAAGGACAATTTCTGGTACAAGAAACCATTCCCGTTGGCGCTaGTGCAGGAAGGAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: TLGKKDLEVKRTISGTRNHSRWR*CRKEEE
Trigger: CTCCTCCTCCTTCCTGCACCAGCGCCAACGGGAATG...GTTTCTTGTACCAGAAATTGTCCTTTTGACTTCTAGATCCTTCTTCCCTAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp GAAGCTGGCAGGCGTTCTCAGTGCGTCCATGTGAGCTCTTTTGTAGATCAAACCAAAGAGACAAGTTCTTaGCTAATGCTCTTCCCAGTA +
Preference number: 4 (lower is better)
Translates to: EAGRRSQCVHVSSFVDQTKETSS*LMLFPV
Trigger: TACTGGGAAGAGCATTAGCCAAGAACTTGTCTCTTT...GGTTTGATCTACAAAAGAGCTCACATGGACGCACTGAGAACGCCTGCCAGCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp ACATTAGGGAAGAAGGATCTAGAAGTCAAAAGGACAATTTCTGGTACAAGAAACTCTGTGAATCGGAGGTaGGCCCAGGAGGGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: TLGKKDLEVKRTISGTRNSVNRR*AQEGAG
Trigger: TCCTGCACCCTCCTGGGCCCACCTCCGATTCACAGA...GTTTCTTGTACCAGAAATTGTCCTTTTGACTTCTAGATCCTTCTTCCCTAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp ATAGGCGTCGCTTTGTTTTCCTTATTCTTCAGGACTGAGAAATGTGAAAATATGTCTGTGAATCGGAGGTaGGCCCAGGAGGGTGCAGGA +
Preference number: 4 (lower is better)
Translates to: IGVALFSLFFRTEKCENMSVNRR*AQEGAG
Trigger: TCCTGCACCCTCCTGGGCCCACCTCCGATTCACAGA...CATATTTTCACATTTCTCAGTCCTGAAGAATAAGGAAAACAAAGCGACGCCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR TCA 90 bp GAGACAAGTTCTTGGCTAATGCTCTTCCCAGTATCACAACACCAGGCCGTGATCTGGTCATTGAATCTATaGGGCGAACATACAGATCTT +
Preference number: 4 (lower is better)
Translates to: ETSSWLMLFPVSQHQAVIWSLNL*GEHTDL
Trigger: AAGATCTGTATGTTCGCCTCATAGATTCAATGACCA...GATCACGGCCTGGTGTTGTGATACTGGGAAGAGCATTAGCCAAGAACTTGTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR TCA 90 bp ACTTGCTTAACAGGAAGCTCTAGCAGTGGGAGAATATTGGAACCAACAGACAGTATCTCCTGGTTGTTGTaGGGCATTCCGTATAAGGCT +
Preference number: 4 (lower is better)
Translates to: TCLTGSSSSGRILEPTDSISWLL*GIPYKA
Trigger: AGCCTTATACGGAATGCCTCACAACAACCAGGAGAT...ACTGTCTGTTGGTTCCAATATTCTCCCACTGCTAGAGCTTCCTGTTAAGCAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR TCA 90 bp TTACTAGACATGGCCAAGACGGAGTCGGAAACTTTATACAAAATAGGCGTCGCTCACAACACCAGGCCGTaGTCAAAAACCAATACAGAC +
Preference number: 4 (lower is better)
Translates to: LLDMAKTESETLYKIGVAHNTRP*SKTNTD
Trigger: GTCTGTATTGGTTTTTGATCACGGCCTGGTGTTGTG...AGCGACGCCTATTTTGTATAAAGTTTCCGACTCCGTCTTGGCCATGTCTAGTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR GCA 90 bp ATAGGCGTCGCTTTGTTTTCCTTATTCTTCAGGACTGAGAAATGTGAAAATATGTGTGTGCAGGGTTGTTaGCCAGGGTGGGGATCTGGT +
Preference number: 4 (lower is better)
Translates to: IGVALFSLFFRTEKCENMCVQGC*PGWGSG
Trigger: ACCAGATCCCCACCCTGGGCAACAACCCTGCACACA...CATATTTTCACATTTCTCAGTCCTGAAGAATAAGGAAAACAAAGCGACGCCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR GCA 90 bp ACATTAGGGAAGAAGGATCTAGAAGTCAAAAGGACAATTTCTGGTACAAGAAACCATCATGCCCGTGTGTaGAGGGTTGTTGCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: TLGKKDLEVKRTISGTRNHHARV*RVVAQG
Trigger: ACCCTGGGCAACAACCCTGCACACACGGGCATGATG...GTTTCTTGTACCAGAAATTGTCCTTTTGACTTCTAGATCCTTCTTCCCTAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR GCA 90 bp ATACTGTTTCCATCAGCATGTCTTAATATACTAAACGTGTCCCCTGAAGTCCGTGGCAGGCGTTCTCAGTaGGTCCATGTGAGCTCTTTT +
Preference number: 4 (lower is better)
Translates to: ILFPSACLNILNVSPEVRGRRSQ*VHVSSF
Trigger: AAAAGAGCTCACATGGACGCACTGAGAACGCCTGCC...ACGGACTTCAGGGGACACGTTTAGTATATTAAGACATGCTGATGGAAACAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp TTTCCATCAGCATGTCTTAATATACTAAACGTGTCCCCTGAAGTCCGTCCTTTGCCCGCCTCCCGTGTTTaGAATTGTTGTGCACAAACA +
Preference number: 4 (lower is better)
Translates to: FPSACLNILNVSPEVRPLPASRV*NCCAQT
Trigger: TGTTTGTGCACAACAATTCCAAACACGGGAGGCGGG...CAAAGGACGGACTTCAGGGGACACGTTTAGTATATTAAGACATGCTGATGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp GACGGAGTCGGAAACTTTATACAAAATAGGCGTCGCTTTGTTTTCCTTATTCTTGGGTCTGGACTCGGATaGCATGGGGAGTTATCAGCT +
Preference number: 4 (lower is better)
Translates to: DGVGNFIQNRRRFVFLILGSGLG*HGELSA
Trigger: AGCTGATAACTCCCCATGCCATCCGAGTCCAGACCC...AAGAATAAGGAAAACAAAGCGACGCCTATTTTGTATAAAGTTTCCGACTCCGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp ACTTGCTTAACAGGAAGCTCTAGCAGTGGGAGAATATTGGAACCAACAGACAGTATCACCCGGATGTCTTaGGATCACTTTCTGCAACCT +
Preference number: 4 (lower is better)
Translates to: TCLTGSSSSGRILEPTDSITRMS*DHFLQP
Trigger: AGGTTGCAGAAAGTGATCCCAAGACATCCGGGTGAT...ACTGTCTGTTGGTTCCAATATTCTCCCACTGCTAGAGCTTCCTGTTAAGCAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp ATACTGTTTCCATCAGCATGTCTTAATATACTAAACGTGTCCCCTGAAGTCCGTAGCCGACTTGGTCGTTaGCTTGTGACGTCTCTGACA +
Preference number: 4 (lower is better)
Translates to: ILFPSACLNILNVSPEVRSRLGR*LVTSLT
Trigger: TGTCAGAGACGTCACAAGCCAACGACCAAGTCGGCT...ACGGACTTCAGGGGACACGTTTAGTATATTAAGACATGCTGATGGAAACAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp TGGAGGCATTTTTCATCAGCGTTTCATGATCATCAAAATGGTGCATTCACAAAGCCCCTAGACTGGCCATaGCGCCACTTCCATATCCAT +
Preference number: 4 (lower is better)
Translates to: WRHFSSAFHDHQNGAFTKPLDWP*RHFHIH
Trigger: ATGGATATGGAAGTGGCGCCATGGCCAGTCTAGGGG...CTTTGTGAATGCACCATTTTGATGATCATGAAACGCTGATGAAAAATGCCTCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp ATACTAAACGTGTCCCCTGAAGTCCGTCCTTTGATGCTGGGTGCTGCGGAAGGTCAAAAGGACAATTTCTaGTACAAGAAACATAGACCT +
Preference number: 4 (lower is better)
Translates to: ILNVSPEVRPLMLGAAEGQKDNF*YKKHRP
Trigger: AGGTCTATGTTTCTTGTACCAGAAATTGTCCTTTTG...ACCTTCCGCAGCACCCAGCATCAAAGGACGGACTTCAGGGGACACGTTTAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR TCA 90 bp GCTAATGCTCTTCCCAGTATCACAACACCAGGCCGTGATCAAAAACCAATACAGAATGATTACAGGGTCTaGGGGCGTTTCGTTTCTATT +
Preference number: 4 (lower is better)
Translates to: ANALPSITTPGRDQKPIQNDYRV*GRFVSI
Trigger: AATAGAAACGAAACGCCCTCAGACCCTGTAATCATT...CTGTATTGGTTTTTGATCACGGCCTGGTGTTGTGATACTGGGAAGAGCATTAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR TCA 90 bp GGATCTAGAAGTCAAAAGGACAATTTCTGGTACAAGAAACATAGACCTCACAGTCGTGGCCGTCCACGTTaGCTGTTGTCGATACAACAA +
Preference number: 4 (lower is better)
Translates to: GSRSQKDNFWYKKHRPHSRGRPR*LLSIQQ
Trigger: TTGTTGTATCGACAACAGTCAACGTGGACGGCCACG...ACTGTGAGGTCTATGTTTCTTGTACCAGAAATTGTCCTTTTGACTTCTAGATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR TCA 90 bp GAAGGATCTAGAAGTCAAAAGGACAATTTCTGGTACAAGAAACATAGACCTCACCCGCTCGCTTCAAGATaGTCTCCTGGTTGTTGTGAG +
Preference number: 4 (lower is better)
Translates to: EGSRSQKDNFWYKKHRPHPLASR*SPGCCE
Trigger: CTCACAACAACCAGGAGATCATCTTGAAGCGAGCGG...GTGAGGTCTATGTTTCTTGTACCAGAAATTGTCCTTTTGACTTCTAGATCCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR TCA 90 bp GGATCTAGAAGTCAAAAGGACAATTTCTGGTACAAGAAACATAGACCTCACAGTCCGCTCGCTTCAAGATaGTCTCCTGGTTGTTGTGAG +
Preference number: 4 (lower is better)
Translates to: GSRSQKDNFWYKKHRPHSPLASR*SPGCCE
Trigger: CTCACAACAACCAGGAGATCATCTTGAAGCGAGCGG...ACTGTGAGGTCTATGTTTCTTGTACCAGAAATTGTCCTTTTGACTTCTAGATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR GCA 90 bp ATGCTCTTCCCAGTATCACAACACCAGGCCGTGATCAAAAACCAATACAGACAACGAACATACAGATCTTaGTCTGTTCTGACTCCGTTG +
Preference number: 4 (lower is better)
Translates to: MLFPVSQHQAVIKNQYRQRTYRS*SVLTPL
Trigger: CAACGGAGTCAGAACAGAGCAAGATCTGTATGTTCG...TTGTCTGTATTGGTTTTTGATCACGGCCTGGTGTTGTGATACTGGGAAGAGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR GCA 90 bp ACTTGCTTAACAGGAAGCTCTAGCAGTGGGAGAATATTGGAACCAACAGACAGTATCTCGAGGGTTGCCTaGATTCTTCAAACAGTTCTG +
Preference number: 4 (lower is better)
Translates to: TCLTGSSSSGRILEPTDSISRVA*ILQTVL
Trigger: CAGAACTGTTTGAAGAATGCAGGCAACCCTCGAGAT...ACTGTCTGTTGGTTCCAATATTCTCCCACTGCTAGAGCTTCCTGTTAAGCAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR GCA 90 bp ACTTGCTTAACAGGAAGCTCTAGCAGTGGGAGAATATTGGAACCAACAGACAGTGTTCCGAATACAACTTaGAGCCCGTCAAAGAAGTTG +
Preference number: 4 (lower is better)
Translates to: TCLTGSSSSGRILEPTDSVPNTT*SPSKKL
Trigger: CAACTTCTTTGACGGGCTGCAAGTTGTATTCGGAAC...ACTGTCTGTTGGTTCCAATATTCTCCCACTGCTAGAGCTTCCTGTTAAGCAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR GCA 90 bp ATACTGTTTCCATCAGCATGTCTTAATATACTAAACGTGTCCCCTGAAGTCCGTGCCCAGGAGCACCTTTaGAGAACTGCTTGGATTTGT +
Preference number: 4 (lower is better)
Translates to: ILFPSACLNILNVSPEVRAQEHL*RTAWIC
Trigger: ACAAATCCAAGCAGTTCTGCAAAGGTGCTCCTGGGC...ACGGACTTCAGGGGACACGTTTAGTATATTAAGACATGCTGATGGAAACAGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR GCA 90 bp ATAGGCGTCGCTTTGTTTTCCTTATTCTTCAGGACTGAGAAATGTGAAAATATGGGATCTGGTTGTGATTaGGGGGAACGCTGTACAGCG +
Preference number: 4 (lower is better)
Translates to: IGVALFSLFFRTEKCENMGSGCD*GERCTA
Trigger: CGCTGTACAGCGTTCCCCGCAATCACAACCAGATCC...CATATTTTCACATTTCTCAGTCCTGAAGAATAAGGAAAACAAAGCGACGCCTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR GCA 90 bp ATAGGCGTCGCTTTGTTTTCCTTATTCTTCAGGACTGAGAAATGTGAAAATATGAGCCCAGACATAGCTTaGAGTCCATTCCCGTTGGCG +
Preference number: 4 (lower is better)
Translates to: IGVALFSLFFRTEKCENMSPDIA*SPFPLA
Trigger: CGCCAACGGGAATGGACTGCAAGCTATGTCTGGGCT...CATATTTTCACATTTCTCAGTCCTGAAGAATAAGGAAAACAAAGCGACGCCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355311.10
ENST00000368648.8
CDS-3UTR GCA 90 bp CAAAGAGACAAGTTCTTGGCTAATGCTCTTCCCAGTATCACAACACCAGGCCGTTTTTCTCTGTCAGTGTaGTTGTTGAAGGCAAGAGAA +
Preference number: 4 (lower is better)
Translates to: QRDKFLANALPSITTPGRFSLSV*LLKARE
Trigger: TTCTCTTGCCTTCAACAAGCACACTGACAGAGAAAA...ACGGCCTGGTGTTGTGATACTGGGAAGAGCATTAGCCAAGAACTTGTCTCTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR GCA 90 bp ATGCTCTTCCCAGTATCACAACACCAGGCCGTGATCAAAAACCAATACAGACAAGTTGCAGATCACACTTaGTTAACAGGAAGCTCTAGC +
Preference number: 4 (lower is better)
Translates to: MLFPVSQHQAVIKNQYRQVADHT*LTGSSS
Trigger: GCTAGAGCTTCCTGTTAAGCAAGTGTGATCTGCAAC...TTGTCTGTATTGGTTTTTGATCACGGCCTGGTGTTGTGATACTGGGAAGAGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR GCA 90 bp TTTCCATCAGCATGTCTTAATATACTAAACGTGTCCCCTGAAGTCCGTCCTTTGTTGCTGTGCCGTGTCTaGAAAGCACTTAGTGCAAAG +
Preference number: 4 (lower is better)
Translates to: FPSACLNILNVSPEVRPLLLCRV*KALSAK
Trigger: CTTTGCACTAAGTGCTTTGCAGACACGGCACAGCAA...CAAAGGACGGACTTCAGGGGACACGTTTAGTATATTAAGACATGCTGATGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR GCA 90 bp ATGCTCTTCCCAGTATCACAACACCAGGCCGTGATCAAAAACCAATACAGACAAGCAAAATGTTTGCTGTaGCGTGTCTGCAAAGCACTT +
Preference number: 4 (lower is better)
Translates to: MLFPVSQHQAVIKNQYRQAKCLL*RVCKAL
Trigger: AAGTGCTTTGCAGACACGGCACAGCAAACATTTTGC...TTGTCTGTATTGGTTTTTGATCACGGCCTGGTGTTGTGATACTGGGAAGAGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR GCA 90 bp CAAAGAGACAAGTTCTTGGCTAATGCTCTTCCCAGTATCACAACACCAGGCCGTCATCAAAGTGAAATATaGCACCGACTTCACAAAAGG +
Preference number: 4 (lower is better)
Translates to: QRDKFLANALPSITTPGRHQSEI*HRLHKR
Trigger: CCTTTTGTGAAGTCGGTGGCATATTTCACTTTGATG...ACGGCCTGGTGTTGTGATACTGGGAAGAGCATTAGCCAAGAACTTGTCTCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440978.2
CDS-3UTR CCA 90 bp TTACTAGACATGGCCAAGACGGAGTCGGAAACTTTATACAAAATAGGCGTCGCTAGTGGATGCCGTTGTTaGTTTTCTCGTTGTTTGGCT +
Preference number: 4 (lower is better)
Translates to: LLDMAKTESETLYKIGVASGCRC*FSRCLA
Trigger: AGCCAAACAACGAGAAAACCAACAACGGCATCCACT...AGCGACGCCTATTTTGTATAAAGTTTCCGACTCCGTCTTGGCCATGTCTAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp GCACTAAGAGGCACGATATCTGAAGGAGGTCATTCCAGTTTTAAAAGTACGGACGTCGATACAACAACCTaGAATCTCCGCATATCTCGA +
Preference number: 4 (lower is better)
Translates to: ALRGTISEGGHSSFKSTDVDTTT*NLRISR
Trigger: TCGAGATATGCGGAGATTCCAGGTTGTTGTATCGAC...GTCCGTACTTTTAAAACTGGAATGACCTCCTTCAGATATCGTGCCTCTTAGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp ATAGGCGTCGCTTTGTTTTCCTTATTCTTCAGGACTGAGAAATGTGAAAATATGTGGACTCGGATGGCATaGGGAGTTATCAGCTCGCTC +
Preference number: 4 (lower is better)
Translates to: IGVALFSLFFRTEKCENMWTRMA*GVISSL
Trigger: GAGCGAGCTGATAACTCCCCATGCCATCCGAGTCCA...CATATTTTCACATTTCTCAGTCCTGAAGAATAAGGAAAACAAAGCGACGCCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp TTTTCCAGTCTGATGGCTCATACCTCCTTGGCCCTCTTTTTATCACCACAAAAATCAGTAACACCTCCTTaGGTAACCTTTCGGGATCAC +
Preference number: 4 (lower is better)
Translates to: FSSLMAHTSLALFLSPQKSVTPP*VTFRDH
Trigger: GTGATCCCGAAAGGTTACCCAAGGAGGTGTTACTGA...TTTTTGTGGTGATAAAAAGAGGGCCAAGGAGGTATGAGCCATCAGACTGGAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp ATAGGCGTCGCTTTGTTTTCCTTATTCTTCAGGACTGAGAAATGTGAAAATATGACGTTGACGGCTAGCTaGCTGCTGAAGGAGTTGACG +
Preference number: 4 (lower is better)
Translates to: IGVALFSLFFRTEKCENMTLTAS*LLKELT
Trigger: CGTCAACTCCTTCAGCAGCCAGCTAGCCGTCAACGT...CATATTTTCACATTTCTCAGTCCTGAAGAATAAGGAAAACAAAGCGACGCCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp TGGAGGCATTTTTCATCAGCGTTTCATGATCATCAAAATGGTGCATTCACAAAGAGCCGACTTGGTCGTTaGCTTGTGACGTCTCTGACA +
Preference number: 4 (lower is better)
Translates to: WRHFSSAFHDHQNGAFTKSRLGR*LVTSLT
Trigger: TGTCAGAGACGTCACAAGCCAACGACCAAGTCGGCT...CTTTGTGAATGCACCATTTTGATGATCATGAAACGCTGATGAAAAATGCCTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp ATAGGCGTCGCTTTGTTTTCCTTATTCTTCAGGACTGAGAAATGTGAAAATATGCCCCTAGACTGGCCATaGCGCCACTTCCATATCCAT +
Preference number: 4 (lower is better)
Translates to: IGVALFSLFFRTEKCENMPLDWP*RHFHIH
Trigger: ATGGATATGGAAGTGGCGCCATGGCCAGTCTAGGGG...CATATTTTCACATTTCTCAGTCCTGAAGAATAAGGAAAACAAAGCGACGCCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp ATAGGCGTCGCTTTGTTTTCCTTATTCTTCAGGACTGAGAAATGTGAAAATATGAGAAGTCCCTCACATTaGCGGGACTACCAGCCCAGA +
Preference number: 4 (lower is better)
Translates to: IGVALFSLFFRTEKCENMRSPSH*RDYQPR
Trigger: TCTGGGCTGGTAGTCCCGCCAATGTGAGGGACTTCT...CATATTTTCACATTTCTCAGTCCTGAAGAATAAGGAAAACAAAGCGACGCCTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp ATACTGTTTCCATCAGCATGTCTTAATATACTAAACGTGTCCCCTGAAGTCCGTTTTGTCACGGCCGGGTaGCACCGATTTGTTTTGACT +
Preference number: 4 (lower is better)
Translates to: ILFPSACLNILNVSPEVRFVTAG*HRFVLT
Trigger: AGTCAAAACAAATCGGTGCCACCCGGCCGTGACAAA...ACGGACTTCAGGGGACACGTTTAGTATATTAAGACATGCTGATGGAAACAGTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR TCA 90 bp ATAGGCGTCGCTTTGTTTTCCTTATTCTTCAGGACTGAGAAATGTGAAAATATGTGTGCTGCTACAGTTTaGAGGGAGGGTGACCGAAGA +
Preference number: 4 (lower is better)
Translates to: IGVALFSLFFRTEKCENMCAATV*REGDRR
Trigger: TCTTCGGTCACCCTCCCTTCAAACTGTAGCAGCACA...CATATTTTCACATTTCTCAGTCCTGAAGAATAAGGAAAACAAAGCGACGCCTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355311.10
ENST00000440978.2
CDS-3UTR TCA 90 bp GGATCTAGAAGTCAAAAGGACAATTTCTGGTACAAGAAACATAGACCTCACAGTACTAAACGTGTCCCCTaGAGTCCGTCCTTTGATGCT +
Preference number: 4 (lower is better)
Translates to: GSRSQKDNFWYKKHRPHSTKRVP*SPSFDA
Trigger: AGCATCAAAGGACGGACTTCAGGGGACACGTTTAGT...ACTGTGAGGTCTATGTTTCTTGTACCAGAAATTGTCCTTTTGACTTCTAGATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR GCA 90 bp TGGAGGCATTTTTCATCAGCGTTTCATGATCATCAAAATGGTGCATTCACAAAGGTTGTTGTTGTTGTTTaGAGGCGCGCTCAACGTGGT +
Preference number: 4 (lower is better)
Translates to: WRHFSSAFHDHQNGAFTKVVVVV*RRAQRG
Trigger: ACCACGTTGAGCGCGCCTGCAAACAACAACAACAAC...CTTTGTGAATGCACCATTTTGATGATCATGAAACGCTGATGAAAAATGCCTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR GCA 90 bp TTACTAGACATGGCCAAGACGGAGTCGGAAACTTTATACAAAATAGGCGTCGCTGGAGTTTATAGTGGATaGCGTTGTTGGTTTTCTCGT +
Preference number: 4 (lower is better)
Translates to: LLDMAKTESETLYKIGVAGVYSG*RCWFSR
Trigger: ACGAGAAAACCAACAACGGCATCCACTATAAACTCC...AGCGACGCCTATTTTGTATAAAGTTTCCGACTCCGTCTTGGCCATGTCTAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR GCA 90 bp TTTCCATCAGCATGTCTTAATATACTAAACGTGTCCCCTGAAGTCCGTCCTTTGGTTCCGAATACAACTTaGAGCCCGTCAAAGAAGTTG +
Preference number: 4 (lower is better)
Translates to: FPSACLNILNVSPEVRPLVPNTT*SPSKKL
Trigger: CAACTTCTTTGACGGGCTGCAAGTTGTATTCGGAAC...CAAAGGACGGACTTCAGGGGACACGTTTAGTATATTAAGACATGCTGATGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR GCA 90 bp TGGAGGCATTTTTCATCAGCGTTTCATGATCATCAAAATGGTGCATTCACAAAGGCCCAGGAGCACCTTTaGAGAACTGCTTGGATTTGT +
Preference number: 4 (lower is better)
Translates to: WRHFSSAFHDHQNGAFTKAQEHL*RTAWIC
Trigger: ACAAATCCAAGCAGTTCTGCAAAGGTGCTCCTGGGC...CTTTGTGAATGCACCATTTTGATGATCATGAAACGCTGATGAAAAATGCCTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR GCA 90 bp GGATCTAGAAGTCAAAAGGACAATTTCTGGTACAAGAAACATAGACCTCACAGTAAATGCCGTGTGTGCTaGTACAGTTTGAAGGGAGGG +
Preference number: 4 (lower is better)
Translates to: GSRSQKDNFWYKKHRPHSKCRVC*YSLKGG
Trigger: CCCTCCCTTCAAACTGTAGCAGCACACACGGCATTT...ACTGTGAGGTCTATGTTTCTTGTACCAGAAATTGTCCTTTTGACTTCTAGATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355311.10
ENST00000440978.2
CDS-3UTR GCA 90 bp TGGAGGCATTTTTCATCAGCGTTTCATGATCATCAAAATGGTGCATTCACAAAGGCTCTTCTGTTTCACTaGGGAGATGACATTGGCAGG +
Preference number: 4 (lower is better)
Translates to: WRHFSSAFHDHQNGAFTKALLFH*GDDIGR
Trigger: CCTGCCAATGTCATCTCCGCAGTGAAACAGAAGAGC...CTTTGTGAATGCACCATTTTGATGATCATGAAACGCTGATGAAAAATGCCTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355311.10
ENST00000440978.2
CDS-3UTR GCA 90 bp GGATCTAGAAGTCAAAAGGACAATTTCTGGTACAAGAAACATAGACCTCACAGTGCTCTTCTGTTTCACTaGGGAGATGACATTGGCAGG +
Preference number: 4 (lower is better)
Translates to: GSRSQKDNFWYKKHRPHSALLFH*GDDIGR
Trigger: CCTGCCAATGTCATCTCCGCAGTGAAACAGAAGAGC...ACTGTGAGGTCTATGTTTCTTGTACCAGAAATTGTCCTTTTGACTTCTAGATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355311.10
ENST00000440978.2
CDS-3UTR CCA 90 bp GAAGGATCTAGAAGTCAAAAGGACAATTTCTGGTACAAGAAACATAGACCTCACGGCCCTCGTAGACGATaGCCTGTTTGGTCATTGAAT +
Preference number: 4 (lower is better)
Translates to: EGSRSQKDNFWYKKHRPHGPRRR*PVWSLN
Trigger: ATTCAATGACCAAACAGGCCATCGTCTACGAGGGCC...GTGAGGTCTATGTTTCTTGTACCAGAAATTGTCCTTTTGACTTCTAGATCCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp TGGAGGCATTTTTCATCAGCGTTTCATGATCATCAAAATGGTGCATTCACAAAGGGCCCTCGTAGACGATaGCCTGTTTGGTCATTGAAT +
Preference number: 4 (lower is better)
Translates to: WRHFSSAFHDHQNGAFTKGPRRR*PVWSLN
Trigger: ATTCAATGACCAAACAGGCCATCGTCTACGAGGGCC...CTTTGTGAATGCACCATTTTGATGATCATGAAACGCTGATGAAAAATGCCTCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp GCTAATGCTCTTCCCAGTATCACAACACCAGGCCGTGATCAAAAACCAATACAGAAAGAGACAAGTTCTTaGCTAATGCTCTTCCCAGTA +
Preference number: 4 (lower is better)
Translates to: ANALPSITTPGRDQKPIQKETSS*LMLFPV
Trigger: TACTGGGAAGAGCATTAGCCAAGAACTTGTCTCTTT...CTGTATTGGTTTTTGATCACGGCCTGGTGTTGTGATACTGGGAAGAGCATTAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR TCA 90 bp GGATCTAGAAGTCAAAAGGACAATTTCTGGTACAAGAAACATAGACCTCACAGTATCTCCTGGTTGTTGTaGGGCATTCCGTATAAGGCT +
Preference number: 4 (lower is better)
Translates to: GSRSQKDNFWYKKHRPHSISWLL*GIPYKA
Trigger: AGCCTTATACGGAATGCCTCACAACAACCAGGAGAT...ACTGTGAGGTCTATGTTTCTTGTACCAGAAATTGTCCTTTTGACTTCTAGATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR TCA 90 bp ATAGGCGTCGCTTTGTTTTCCTTATTCTTCAGGACTGAGAAATGTGAAAATATGACTAAACGTGTCCCCTaGAGTCCGTCCTTTGATGCT +
Preference number: 4 (lower is better)
Translates to: IGVALFSLFFRTEKCENMTKRVP*SPSFDA
Trigger: AGCATCAAAGGACGGACTTCAGGGGACACGTTTAGT...CATATTTTCACATTTCTCAGTCCTGAAGAATAAGGAAAACAAAGCGACGCCTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR TCA 90 bp GAAGGATCTAGAAGTCAAAAGGACAATTTCTGGTACAAGAAACATAGACCTCACCACAACACCAGGCCGTaGTCAAAAACCAATACAGAC +
Preference number: 4 (lower is better)
Translates to: EGSRSQKDNFWYKKHRPHHNTRP*SKTNTD
Trigger: GTCTGTATTGGTTTTTGATCACGGCCTGGTGTTGTG...GTGAGGTCTATGTTTCTTGTACCAGAAATTGTCCTTTTGACTTCTAGATCCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR TCA 90 bp ATACTGTTTCCATCAGCATGTCTTAATATACTAAACGTGTCCCCTGAAGTCCGTAAGAGGCACGATATCTaGAGGAGGTCATTCCAGTTT +
Preference number: 4 (lower is better)
Translates to: ILFPSACLNILNVSPEVRKRHDI*RRSFQF
Trigger: AAACTGGAATGACCTCCTTCAGATATCGTGCCTCTT...ACGGACTTCAGGGGACACGTTTAGTATATTAAGACATGCTGATGGAAACAGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR TCA 90 bp GCTAATGCTCTTCCCAGTATCACAACACCAGGCCGTGATCAAAAACCAATACAGATTAGTTCATCAAAGTaGAATATGCCACCGACTTCA +
Preference number: 4 (lower is better)
Translates to: ANALPSITTPGRDQKPIQISSSK*NMPPTS
Trigger: TGAAGTCGGTGGCATATTTCACTTTGATGAACTAAT...CTGTATTGGTTTTTGATCACGGCCTGGTGTTGTGATACTGGGAAGAGCATTAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000440978.2
CDS-3UTR GCA 90 bp ACATTAGGGAAGAAGGATCTAGAAGTCAAAAGGACAATTTCTGGTACAAGAAACGTTGTTGTTGTTGTTTaGAGGCGCGCTCAACGTGGT +
Preference number: 4 (lower is better)
Translates to: TLGKKDLEVKRTISGTRNVVVVV*RRAQRG
Trigger: ACCACGTTGAGCGCGCCTGCAAACAACAACAACAAC...GTTTCTTGTACCAGAAATTGTCCTTTTGACTTCTAGATCCTTCTTCCCTAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp GCTAATGCTCTTCCCAGTATCACAACACCAGGCCGTGATCAAAAACCAATACAGAACTGCAAGTGTTCATaGGAAAGTAAGTGTCAAATG +
Preference number: 4 (lower is better)
Translates to: ANALPSITTPGRDQKPIQNCKCS*ESKCQM
Trigger: CATTTGACACTTACTTTCCCATGAACACTTGCAGTT...CTGTATTGGTTTTTGATCACGGCCTGGTGTTGTGATACTGGGAAGAGCATTAGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR TCA 90 bp ATACTGTTTCCATCAGCATGTCTTAATATACTAAACGTGTCCCCTGAAGTCCGTCGCGGAATATTCTCCTaGATCCCAAACATGAAAACT +
Preference number: 4 (lower is better)
Translates to: ILFPSACLNILNVSPEVRRGIFS*IPNMKT
Trigger: AGTTTTCATGTTTGGGATTCAGGAGAATATTCCGCG...ACGGACTTCAGGGGACACGTTTAGTATATTAAGACATGCTGATGGAAACAGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR TCA 90 bp GAAGGATCTAGAAGTCAAAAGGACAATTTCTGGTACAAGAAACATAGACCTCACGGCCTGTTTGGTCATTaGATCTATGAGGCGAACATA +
Preference number: 4 (lower is better)
Translates to: EGSRSQKDNFWYKKHRPHGLFGH*IYEANI
Trigger: TATGTTCGCCTCATAGATTCAATGACCAAACAGGCC...GTGAGGTCTATGTTTCTTGTACCAGAAATTGTCCTTTTGACTTCTAGATCCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR TCA 90 bp GCACTAAGAGGCACGATATCTGAAGGAGGTCATTCCAGTTTTAAAAGTACGGACAGTGCTAGCAAAAGTTaGAAAAATGTTGCAGATCAC +
Preference number: 4 (lower is better)
Translates to: ALRGTISEGGHSSFKSTDSASKS*KNVADH
Trigger: GTGATCTGCAACATTTTTTCAACTTTTGCTAGCACT...GTCCGTACTTTTAAAACTGGAATGACCTCCTTCAGATATCGTGCCTCTTAGTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR TCA 90 bp GCACTAAGAGGCACGATATCTGAAGGAGGTCATTCCAGTTTTAAAAGTACGGACATTTTGTCCCTAGAATaGACACTTTGTAAGTTGTGC +
Preference number: 4 (lower is better)
Translates to: ALRGTISEGGHSSFKSTDILSLE*TLCKLC
Trigger: GCACAACTTACAAAGTGTTCATTCTAGGGACAAAAT...GTCCGTACTTTTAAAACTGGAATGACCTCCTTCAGATATCGTGCCTCTTAGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR TCA 90 bp ACTTGCTTAACAGGAAGCTCTAGCAGTGGGAGAATATTGGAACCAACAGACAGTATTTTGTCCCTAGAATaGACACTTTGTAAGTTGTGC +
Preference number: 4 (lower is better)
Translates to: TCLTGSSSSGRILEPTDSILSLE*TLCKLC
Trigger: GCACAACTTACAAAGTGTTCATTCTAGGGACAAAAT...ACTGTCTGTTGGTTCCAATATTCTCCCACTGCTAGAGCTTCCTGTTAAGCAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR GCA 90 bp GACGGAGTCGGAAACTTTATACAAAATAGGCGTCGCTTTGTTTTCCTTATTCTTGCATATCTCGAGGGTTaGCTGCATTCTTCAAACAGT +
Preference number: 4 (lower is better)
Translates to: DGVGNFIQNRRRFVFLILAYLEG*LHSSNS
Trigger: ACTGTTTGAAGAATGCAGGCAACCCTCGAGATATGC...AAGAATAAGGAAAACAAAGCGACGCCTATTTTGTATAAAGTTTCCGACTCCGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR GCA 90 bp GGATCTAGAAGTCAAAAGGACAATTTCTGGTACAAGAAACATAGACCTCACAGTGTTCCGAATACAACTTaGAGCCCGTCAAAGAAGTTG +
Preference number: 4 (lower is better)
Translates to: GSRSQKDNFWYKKHRPHSVPNTT*SPSKKL
Trigger: CAACTTCTTTGACGGGCTGCAAGTTGTATTCGGAAC...ACTGTGAGGTCTATGTTTCTTGTACCAGAAATTGTCCTTTTGACTTCTAGATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR GCA 90 bp GACGGAGTCGGAAACTTTATACAAAATAGGCGTCGCTTTGTTTTCCTTATTCTTAGAAAATGCCGTGTGTaGTGCTACAGTTTGAAGGGA +
Preference number: 4 (lower is better)
Translates to: DGVGNFIQNRRRFVFLILRKCRV*CYSLKG
Trigger: TCCCTTCAAACTGTAGCAGCACACACGGCATTTTCT...AAGAATAAGGAAAACAAAGCGACGCCTATTTTGTATAAAGTTTCCGACTCCGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355311.10
ENST00000440978.2
CDS-3UTR GCA 90 bp GGATCTAGAAGTCAAAAGGACAATTTCTGGTACAAGAAACATAGACCTCACAGTGTTGCAGATCACACTTaGTTAACAGGAAGCTCTAGC +
Preference number: 4 (lower is better)
Translates to: GSRSQKDNFWYKKHRPHSVADHT*LTGSSS
Trigger: GCTAGAGCTTCCTGTTAAGCAAGTGTGATCTGCAAC...ACTGTGAGGTCTATGTTTCTTGTACCAGAAATTGTCCTTTTGACTTCTAGATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp TGGAGGCATTTTTCATCAGCGTTTCATGATCATCAAAATGGTGCATTCACAAAGAGTGGATGCCGTTGTTaGTTTTCTCGTTGTTTGGCT +
Preference number: 4 (lower is better)
Translates to: WRHFSSAFHDHQNGAFTKSGCRC*FSRCLA
Trigger: AGCCAAACAACGAGAAAACCAACAACGGCATCCACT...CTTTGTGAATGCACCATTTTGATGATCATGAAACGCTGATGAAAAATGCCTCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp GGATCTAGAAGTCAAAAGGACAATTTCTGGTACAAGAAACATAGACCTCACAGTAGTGGATGCCGTTGTTaGTTTTCTCGTTGTTTGGCT +
Preference number: 4 (lower is better)
Translates to: GSRSQKDNFWYKKHRPHSSGCRC*FSRCLA
Trigger: AGCCAAACAACGAGAAAACCAACAACGGCATCCACT...ACTGTGAGGTCTATGTTTCTTGTACCAGAAATTGTCCTTTTGACTTCTAGATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp TGGAGGCATTTTTCATCAGCGTTTCATGATCATCAAAATGGTGCATTCACAAAGGTCGATACAACAACCTaGAATCTCCGCATATCTCGA +
Preference number: 4 (lower is better)
Translates to: WRHFSSAFHDHQNGAFTKVDTTT*NLRISR
Trigger: TCGAGATATGCGGAGATTCCAGGTTGTTGTATCGAC...CTTTGTGAATGCACCATTTTGATGATCATGAAACGCTGATGAAAAATGCCTCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp GACGGAGTCGGAAACTTTATACAAAATAGGCGTCGCTTTGTTTTCCTTATTCTTGCCGTAATCTATGGTTaGTTCATTAAGGGCGGTGTA +
Preference number: 4 (lower is better)
Translates to: DGVGNFIQNRRRFVFLILAVIYG*FIKGGV
Trigger: TACACCGCCCTTAATGAACCAACCATAGATTACGGC...AAGAATAAGGAAAACAAAGCGACGCCTATTTTGTATAAAGTTTCCGACTCCGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp ACATTAGGGAAGAAGGATCTAGAAGTCAAAAGGACAATTTCTGGTACAAGAAACATCACCCGGATGTCTTaGGATCACTTTCTGCAACCT +
Preference number: 4 (lower is better)
Translates to: TLGKKDLEVKRTISGTRNITRMS*DHFLQP
Trigger: AGGTTGCAGAAAGTGATCCCAAGACATCCGGGTGAT...GTTTCTTGTACCAGAAATTGTCCTTTTGACTTCTAGATCCTTCTTCCCTAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp ACATTAGGGAAGAAGGATCTAGAAGTCAAAAGGACAATTTCTGGTACAAGAAACTCAGTAACACCTCCTTaGGTAACCTTTCGGGATCAC +
Preference number: 4 (lower is better)
Translates to: TLGKKDLEVKRTISGTRNSVTPP*VTFRDH
Trigger: GTGATCCCGAAAGGTTACCCAAGGAGGTGTTACTGA...GTTTCTTGTACCAGAAATTGTCCTTTTGACTTCTAGATCCTTCTTCCCTAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp ATAGGCGTCGCTTTGTTTTCCTTATTCTTCAGGACTGAGAAATGTGAAAATATGTCAGTAACACCTCCTTaGGTAACCTTTCGGGATCAC +
Preference number: 4 (lower is better)
Translates to: IGVALFSLFFRTEKCENMSVTPP*VTFRDH
Trigger: GTGATCCCGAAAGGTTACCCAAGGAGGTGTTACTGA...CATATTTTCACATTTCTCAGTCCTGAAGAATAAGGAAAACAAAGCGACGCCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp GACGGAGTCGGAAACTTTATACAAAATAGGCGTCGCTTTGTTTTCCTTATTCTTGCAGTGGGAGAATATTaGAACCAACAGACAGTAGCA +
Preference number: 4 (lower is better)
Translates to: DGVGNFIQNRRRFVFLILAVGEY*NQQTVA
Trigger: TGCTACTGTCTGTTGGTTCCAATATTCTCCCACTGC...AAGAATAAGGAAAACAAAGCGACGCCTATTTTGTATAAAGTTTCCGACTCCGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp ATAGGCGTCGCTTTGTTTTCCTTATTCTTCAGGACTGAGAAATGTGAAAATATGCACAGTTCAGCTATGTaGCAAAGTCAATGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: IGVALFSLFFRTEKCENMHSSAM*QSQWVA
Trigger: TGCCACCCATTGACTTTGCCACATAGCTGAACTGTG...CATATTTTCACATTTCTCAGTCCTGAAGAATAAGGAAAACAAAGCGACGCCTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR TCA 90 bp ATACTGTTTCCATCAGCATGTCTTAATATACTAAACGTGTCCCCTGAAGTCCGTTGGTCATTGAATCTATaGGGCGAACATACAGATCTT +
Preference number: 4 (lower is better)
Translates to: ILFPSACLNILNVSPEVRWSLNL*GEHTDL
Trigger: AAGATCTGTATGTTCGCCTCATAGATTCAATGACCA...ACGGACTTCAGGGGACACGTTTAGTATATTAAGACATGCTGATGGAAACAGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR TCA 90 bp ACATTAGGGAAGAAGGATCTAGAAGTCAAAAGGACAATTTCTGGTACAAGAAACGGCCTGTTTGGTCATTaGATCTATGAGGCGAACATA +
Preference number: 4 (lower is better)
Translates to: TLGKKDLEVKRTISGTRNGLFGH*IYEANI
Trigger: TATGTTCGCCTCATAGATTCAATGACCAAACAGGCC...GTTTCTTGTACCAGAAATTGTCCTTTTGACTTCTAGATCCTTCTTCCCTAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR TCA 90 bp TTTTCCAGTCTGATGGCTCATACCTCCTTGGCCCTCTTTTTATCACCACAAAAAAAATGGAATTGTTCATaGAGAAGTAGGCTGTTTGCA +
Preference number: 4 (lower is better)
Translates to: FSSLMAHTSLALFLSPQKKWNCS*RSRLFA
Trigger: TGCAAACAGCCTACTTCTTCATGAACAATTCCATTT...TTTTTGTGGTGATAAAAAGAGGGCCAAGGAGGTATGAGCCATCAGACTGGAAAA
40% GC, longest homopolymer 8 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR TCA 90 bp ATACTGTTTCCATCAGCATGTCTTAATATACTAAACGTGTCCCCTGAAGTCCGTTGTCAGTGTGCTTGTTaGAGGCAAGAGAATTCAATA +
Preference number: 4 (lower is better)
Translates to: ILFPSACLNILNVSPEVRCQCAC*RQENSI
Trigger: TATTGAATTCTCTTGCCTTCAACAAGCACACTGACA...ACGGACTTCAGGGGACACGTTTAGTATATTAAGACATGCTGATGGAAACAGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR TCA 90 bp TTTCCATCAGCATGTCTTAATATACTAAACGTGTCCCCTGAAGTCCGTCCTTTGAGTGCTAGCAAAAGTTaGAAAAATGTTGCAGATCAC +
Preference number: 4 (lower is better)
Translates to: FPSACLNILNVSPEVRPLSASKS*KNVADH
Trigger: GTGATCTGCAACATTTTTTCAACTTTTGCTAGCACT...CAAAGGACGGACTTCAGGGGACACGTTTAGTATATTAAGACATGCTGATGGAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR GCA 90 bp ACATTAGGGAAGAAGGATCTAGAAGTCAAAAGGACAATTTCTGGTACAAGAAACCGAACATACAGATCTTaGTCTGTTCTGACTCCGTTG +
Preference number: 4 (lower is better)
Translates to: TLGKKDLEVKRTISGTRNRTYRS*SVLTPL
Trigger: CAACGGAGTCAGAACAGAGCAAGATCTGTATGTTCG...GTTTCTTGTACCAGAAATTGTCCTTTTGACTTCTAGATCCTTCTTCCCTAATGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR GCA 90 bp ATAGGCGTCGCTTTGTTTTCCTTATTCTTCAGGACTGAGAAATGTGAAAATATGCGAACATACAGATCTTaGTCTGTTCTGACTCCGTTG +
Preference number: 4 (lower is better)
Translates to: IGVALFSLFFRTEKCENMRTYRS*SVLTPL
Trigger: CAACGGAGTCAGAACAGAGCAAGATCTGTATGTTCG...CATATTTTCACATTTCTCAGTCCTGAAGAATAAGGAAAACAAAGCGACGCCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR GCA 90 bp ATAGGCGTCGCTTTGTTTTCCTTATTCTTCAGGACTGAGAAATGTGAAAATATGGCATATCTCGAGGGTTaGCTGCATTCTTCAAACAGT +
Preference number: 4 (lower is better)
Translates to: IGVALFSLFFRTEKCENMAYLEG*LHSSNS
Trigger: ACTGTTTGAAGAATGCAGGCAACCCTCGAGATATGC...CATATTTTCACATTTCTCAGTCCTGAAGAATAAGGAAAACAAAGCGACGCCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp ATAGGCGTCGCTTTGTTTTCCTTATTCTTCAGGACTGAGAAATGTGAAAATATGGCAGTGGGAGAATATTaGAACCAACAGACAGTAGCA +
Preference number: 4 (lower is better)
Translates to: IGVALFSLFFRTEKCENMAVGEY*NQQTVA
Trigger: TGCTACTGTCTGTTGGTTCCAATATTCTCCCACTGC...CATATTTTCACATTTCTCAGTCCTGAAGAATAAGGAAAACAAAGCGACGCCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp TTTTCCAGTCTGATGGCTCATACCTCCTTGGCCCTCTTTTTATCACCACAAAAAAACTGCAAGTGTTCATaGGAAAGTAAGTGTCAAATG +
Preference number: 4 (lower is better)
Translates to: FSSLMAHTSLALFLSPQKNCKCS*ESKCQM
Trigger: CATTTGACACTTACTTTCCCATGAACACTTGCAGTT...TTTTTGTGGTGATAAAAAGAGGGCCAAGGAGGTATGAGCCATCAGACTGGAAAA
40% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR TCA 90 bp ATAGGCGTCGCTTTGTTTTCCTTATTCTTCAGGACTGAGAAATGTGAAAATATGCGCGGAATATTCTCCTaGATCCCAAACATGAAAACT +
Preference number: 4 (lower is better)
Translates to: IGVALFSLFFRTEKCENMRGIFS*IPNMKT
Trigger: AGTTTTCATGTTTGGGATTCAGGAGAATATTCCGCG...CATATTTTCACATTTCTCAGTCCTGAAGAATAAGGAAAACAAAGCGACGCCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR TCA 90 bp ATAGGCGTCGCTTTGTTTTCCTTATTCTTCAGGACTGAGAAATGTGAAAATATGAATGATTACAGGGTCTaGGGGCGTTTCGTTTCTATT +
Preference number: 4 (lower is better)
Translates to: IGVALFSLFFRTEKCENMNDYRV*GRFVSI
Trigger: AATAGAAACGAAACGCCCTCAGACCCTGTAATCATT...CATATTTTCACATTTCTCAGTCCTGAAGAATAAGGAAAACAAAGCGACGCCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR TCA 90 bp GACGGAGTCGGAAACTTTATACAAAATAGGCGTCGCTTTGTTTTCCTTATTCTTTGTCAGTGTGCTTGTTaGAGGCAAGAGAATTCAATA +
Preference number: 4 (lower is better)
Translates to: DGVGNFIQNRRRFVFLILCQCAC*RQENSI
Trigger: TATTGAATTCTCTTGCCTTCAACAAGCACACTGACA...AAGAATAAGGAAAACAAAGCGACGCCTATTTTGTATAAAGTTTCCGACTCCGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR GCA 90 bp ATAGGCGTCGCTTTGTTTTCCTTATTCTTCAGGACTGAGAAATGTGAAAATATGGGAGTTTATAGTGGATaGCGTTGTTGGTTTTCTCGT +
Preference number: 4 (lower is better)
Translates to: IGVALFSLFFRTEKCENMGVYSG*RCWFSR
Trigger: ACGAGAAAACCAACAACGGCATCCACTATAAACTCC...CATATTTTCACATTTCTCAGTCCTGAAGAATAAGGAAAACAAAGCGACGCCTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR GCA 90 bp GAAGGATCTAGAAGTCAAAAGGACAATTTCTGGTACAAGAAACATAGACCTCACGCGTTTCGTTTCTATTaGCACAACTTTTCTTGTCAC +
Preference number: 4 (lower is better)
Translates to: EGSRSQKDNFWYKKHRPHAFRFY*HNFSCH
Trigger: GTGACAAGAAAAGTTGTGGCAATAGAAACGAAACGC...GTGAGGTCTATGTTTCTTGTACCAGAAATTGTCCTTTTGACTTCTAGATCCTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR GCA 90 bp TGGAGGCATTTTTCATCAGCGTTTCATGATCATCAAAATGGTGCATTCACAAAGGCGTTTCGTTTCTATTaGCACAACTTTTCTTGTCAC +
Preference number: 4 (lower is better)
Translates to: WRHFSSAFHDHQNGAFTKAFRFY*HNFSCH
Trigger: GTGACAAGAAAAGTTGTGGCAATAGAAACGAAACGC...CTTTGTGAATGCACCATTTTGATGATCATGAAACGCTGATGAAAAATGCCTCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp TTTCCATCAGCATGTCTTAATATACTAAACGTGTCCCCTGAAGTCCGTCCTTTGCAAAAGGACAATTTCTaGTACAAGAAACATAGACCT +
Preference number: 4 (lower is better)
Translates to: FPSACLNILNVSPEVRPLQKDNF*YKKHRP
Trigger: AGGTCTATGTTTCTTGTACCAGAAATTGTCCTTTTG...CAAAGGACGGACTTCAGGGGACACGTTTAGTATATTAAGACATGCTGATGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR TCA 90 bp GACGGAGTCGGAAACTTTATACAAAATAGGCGTCGCTTTGTTTTCCTTATTCTTAAATGGAATTGTTCATaGAGAAGTAGGCTGTTTGCA +
Preference number: 4 (lower is better)
Translates to: DGVGNFIQNRRRFVFLILKWNCS*RSRLFA
Trigger: TGCAAACAGCCTACTTCTTCATGAACAATTCCATTT...AAGAATAAGGAAAACAAAGCGACGCCTATTTTGTATAAAGTTTCCGACTCCGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp TGGAGGCATTTTTCATCAGCGTTTCATGATCATCAAAATGGTGCATTCACAAAGCAAAAGGACAATTTCTaGTACAAGAAACATAGACCT +
Preference number: 4 (lower is better)
Translates to: WRHFSSAFHDHQNGAFTKQKDNF*YKKHRP
Trigger: AGGTCTATGTTTCTTGTACCAGAAATTGTCCTTTTG...CTTTGTGAATGCACCATTTTGATGATCATGAAACGCTGATGAAAAATGCCTCCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CCA 90 bp ATAGGCGTCGCTTTGTTTTCCTTATTCTTCAGGACTGAGAAATGTGAAAATATGAACTGCAAGTGTTCATaGGAAAGTAAGTGTCAAATG +
Preference number: 4 (lower is better)
Translates to: IGVALFSLFFRTEKCENMNCKCS*ESKCQM
Trigger: CATTTGACACTTACTTTCCCATGAACACTTGCAGTT...CATATTTTCACATTTCTCAGTCCTGAAGAATAAGGAAAACAAAGCGACGCCTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS GCA 90 bp AGCGTTTCCTCGAGCAGCGGCGCTCGGGGCTTGGCGGCAGGCGGCTaGCCTGGCCGCCCTCGCCCTGCTCGGCGCCTGCGGTCCGGCCCC +
Preference number: 5 (lower is better)
Translates to: SVSSSSGARGLAAGG*PGRPRPARRLRSGP
Trigger: GGGGCCGGACCGCAGGCGCCGAGCAGGGCGAGGGCGGCCAGGGCAGCCGCCTGCCGCCAAGCCCCGAGCGCCGCTGCTCGAGGAAACGCT
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS GCA 90 bp ACGTGGTGTCATCCTAGCCAGGCGGCGTCCGCGGCTGCAGGACACTaGGGGATCGCCCGCTTCTGGCGCGGCCCGCCTGTGCCGCTCACT +
Preference number: 5 (lower is better)
Translates to: TWCHPSQAASAAAGH*GIARFWRGPPVPLT
Trigger: AGTGAGCGGCACAGGCGGGCCGCGCCAGAAGCGGGCGATCCCGCAGTGTCCTGCAGCCGCGGACGCCGCCTGGCTAGGATGACACCACGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368648.8
CDS GCA 90 bp ACGTGGTGTCATCCTAGCCAGGCGGCGTCCGCGGCTGCAGGACACTaGGGGATCGCCCGCTTCTGGCGCGGCCCGCCTGCTCCAAAGACA +
Preference number: 5 (lower is better)
Translates to: TWCHPSQAASAAAGH*GIARFWRGPPAPKT
Trigger: TGTCTTTGGAGCAGGCGGGCCGCGCCAGAAGCGGGCGATCCCGCAGTGTCCTGCAGCCGCGGACGCCGCCTGGCTAGGATGACACCACGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355311.10
ENST00000440978.2
CDS GCA 90 bp GAGGGCCCTGGCAGGCACGCGGTCACCTGTGGCGCCAACACCAGCTaGCAGCGGGGAGGACTGTGCTGTGGGGTTCTGCAGGGACCTGAG +
Preference number: 5 (lower is better)
Translates to: EGPGRHAVTCGANTS*QRGGLCCGVLQGPE
Trigger: CTCAGGTCCCTGCAGAACCCCACAGCACAGTCCTCCCCGCTGGCAGCTGGTGTTGGCGCCACAGGTGACCGCGTGCCTGCCAGGGCCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682649.1
CDS CCA 90 bp CAGGCGGCGTCCGCGGCTGCAGGACACTGCGGGATCGCCCGCTTCTaGCGCGGCCCGCCTGCTCCAAAGACAAATAAACGGGGCAGTGAG +
Preference number: 5 (lower is better)
Translates to: QAASAAAGHCGIARF*RGPPAPKTNKRGSE
Trigger: CTCACTGCCCCGTTTATTTGTCTTTGGAGCAGGCGGGCCGCGCCAGAAGCGGGCGATCCCGCAGTGTCCTGCAGCCGCGGACGCCGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355311.10
ENST00000440978.2
CDS CCA 90 bp CCTCAGCACCCAGCAGAGAGCCTTGCAGTCCATTCCCGTTGGCGCTaGTGCAGGAAGGAGGAGGAGAGGCTTGGGGCCGGACCACGGGCG +
Preference number: 5 (lower is better)
Translates to: PQHPAESLAVHSRWR*CRKEEERLGAGPRA
Trigger: CGCCCGTGGTCCGGCCCCAAGCCTCTCCTCCTCCTTCCTGCACCAGCGCCAACGGGAATGGACTGCAAGGCTCTCTGCTGGGTGCTGAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440978.2
CDS GCA 90 bp GAGCAGGACGCGGTGGCCGCGGCGGCGCTTGTTGTTGTTGTTGTTTaGAGGCGCGCTCAACGTGGTGTCATCCTAGCCAGGCGGCGTCCG +
Preference number: 5 (lower is better)
Translates to: EQDAVAAAALVVVVV*RRAQRGVILARRRP
Trigger: CGGACGCCGCCTGGCTAGGATGACACCACGTTGAGCGCGCCTGCAAACAACAACAACAACAAGCGCCGCCGCGGCCACCGCGTCCTGCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS GCA 90 bp CCGTGTGTGCAGGGTTGTTGCCCAGGGTGGGGATCTGGTTGTGATTaGGGGGAACGCTGTACAGCGCCTCGGCGATGTCCGCCGCTCGCT +
Preference number: 5 (lower is better)
Translates to: PCVQGCCPGWGSGCD*GERCTAPRRCPPLA
Trigger: AGCGAGCGGCGGACATCGCCGAGGCGCTGTACAGCGTTCCCCGCAATCACAACCAGATCCCCACCCTGGGCAACAACCCTGCACACACGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
ENST00000675373.1
CDS CCA 90 bp CGCGGCGGCGCTTGTTGTTGTTGTTGTTTGCAGGCGCGCTCAACGTaGTGTCATCCTAGCCAGGCGGCGTCCGCGGCTGCAGGACACTGC +
Preference number: 5 (lower is better)
Translates to: RGGACCCCCLQARST*CHPSQAASAAAGHC
Trigger: GCAGTGTCCTGCAGCCGCGGACGCCGCCTGGCTAGGATGACACCACGTTGAGCGCGCCTGCAAACAACAACAACAACAAGCGCCGCCGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp AACGTGTCCCCTGAAGTCCGTCCTTTGATGCTGGGTGCTGCGGAAGGTAAACAGCTCTGGGCGGCCGTGTaGGCGTCCACCACGCCCGCC +
Preference number: 5 (lower is better)
Translates to: NVSPEVRPLMLGAAEGKQLWAAV*ASTTPA
Trigger: GGCGGGCGTGGTGGACGCCAACACGGCCGCCCAGAG...CTGTTTACCTTCCGCAGCACCCAGCATCAAAGGACGGACTTCAGGGGACACGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS GCA 90 bp TTCCCTGAGGGCCACCCAGCCTCAAACCCAGTGCTTCCATGGGCCTaGCAAGGCATGTGGTCTGTCTATGGGATGGCGGGACCCAGTCAC +
Preference number: 5 (lower is better)
Translates to: FPEGHPASNPVLPWA*QGMWSVYGMAGPSH
Trigger: GTGACTGGGTCCCGCCATCCCATAGACAGACCACATGCCTTGGCAGGCCCATGGAAGCACTGGGTTTGAGGCTGGGTGGCCCTCAGGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682649.1
CDS CCA 90 bp AGCATATACCAAAGGTGGTGTCTTGCAGTCCATTCCCGTTGGCGCTaGTGCAGGAAGGAGGAGGAGAGGCTTGGGGCCGGACCACGGGCG +
Preference number: 5 (lower is better)
Translates to: SIYQRWCLAVHSRWR*CRKEEERLGAGPRA
Trigger: CGCCCGTGGTCCGGCCCCAAGCCTCTCCTCCTCCTTCCTGCACCAGCGCCAACGGGAATGGACTGCAAGACACCACCTTTGGTATATGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675373.1
CDS-3UTR CAA 90 bp ATAAGGACACAGCCCCAAACGGTGTCACCTCTTCGCGGCCGCTCCACATGCACATGGCCGCGGCGGCGCTaGTTGTTGTTGTTGTTTGCA +
Preference number: 5 (lower is better)
Translates to: IRTQPQTVSPLRGRSTCTWPRRR*LLLLFA
Trigger: TGCAAACAACAACAACAACAAGCGCCGCCGCGGCCA...TGTGCATGTGGAGCGGCCGCGAAGAGGTGACACCGTTTGGGGCTGTGTCCTTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp CAAAGAGACAAGTTCTTGGCTAATGCTCTTCCCAGTATCACAACACCAGGCCGTAGGAGGAGGAGAGGCTaGGGGCCGGACCACGGGCGC +
Preference number: 5 (lower is better)
Translates to: QRDKFLANALPSITTPGRRRRRG*GPDHGR
Trigger: GCGCCCGTGGTCCGGCCCCAAGCCTCTCCTCCTCCT...ACGGCCTGGTGTTGTGATACTGGGAAGAGCATTAGCCAAGAACTTGTCTCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp ATAAGGACACAGCCCCAAACGGTGTCACCTCTTCGCGGCCGCTCCACATGCACACCTGAAGTCCGTCCTTaGATGCTGGGTGCTGCGGAA +
Preference number: 5 (lower is better)
Translates to: IRTQPQTVSPLRGRSTCTPEVRP*MLGAAE
Trigger: TTCCGCAGCACCCAGCATCAAAGGACGGACTTCAGG...TGTGCATGTGGAGCGGCCGCGAAGAGGTGACACCGTTTGGGGCTGTGTCCTTAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS CCA 90 bp CAGTGCTTCCATGGGCCTGCCAAGGCATGTGGTCTGTCTATGGGATaGCGGGACCCAGTCACTAATCCTGCACACAAAGCCAGCCCTAGA +
Preference number: 5 (lower is better)
Translates to: QCFHGPAKACGLSMG*RDPVTNPAHKASPR
Trigger: TCTAGGGCTGGCTTTGTGTGCAGGATTAGTGACTGGGTCCCGCCATCCCATAGACAGACCACATGCCTTGGCAGGCCCATGGAAGCACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682649.1
CDS-3UTR CAA 90 bp ATGCTCTTCCCAGTATCACAACACCAGGCCGTGATCAAAAACCAATACAGACAACTCTGGGCGGCCGTGTaGGCGTCCACCACGCCCGCC +
Preference number: 5 (lower is better)
Translates to: MLFPVSQHQAVIKNQYRQLWAAV*ASTTPA
Trigger: GGCGGGCGTGGTGGACGCCAACACGGCCGCCCAGAG...TTGTCTGTATTGGTTTTTGATCACGGCCTGGTGTTGTGATACTGGGAAGAGCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp GCACTAAGAGGCACGATATCTGAAGGAGGTCATTCCAGTTTTAAAAGTACGGACCTCTGGGCGGCCGTGTaGGCGTCCACCACGCCCGCC +
Preference number: 5 (lower is better)
Translates to: ALRGTISEGGHSSFKSTDLWAAV*ASTTPA
Trigger: GGCGGGCGTGGTGGACGCCAACACGGCCGCCCAGAG...GTCCGTACTTTTAAAACTGGAATGACCTCCTTCAGATATCGTGCCTCTTAGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp ATACTAAACGTGTCCCCTGAAGTCCGTCCTTTGATGCTGGGTGCTGCGGAAGGTCCGCGGCGGCGCTTGTaGTTGTTGTTGTTTGCAGGC +
Preference number: 5 (lower is better)
Translates to: ILNVSPEVRPLMLGAAEGPRRRL*LLLFAG
Trigger: GCCTGCAAACAACAACAACAACAAGCGCCGCCGCGG...ACCTTCCGCAGCACCCAGCATCAAAGGACGGACTTCAGGGGACACGTTTAGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp GGACACAGCCCCAAACGGTGTCACCTCTTCGCGGCCGCTCCACATGCACAGAATCGCATATCTCGAGGGTaGCCTGCATTCTTCAAACAG +
Preference number: 5 (lower is better)
Translates to: GHSPKRCHLFAAAPHAQNRISRG*PAFFKQ
Trigger: CTGTTTGAAGAATGCAGGCAACCCTCGAGATATGCG...ATTCTGTGCATGTGGAGCGGCCGCGAAGAGGTGACACCGTTTGGGGCTGTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp ATACTAAACGTGTCCCCTGAAGTCCGTCCTTTGATGCTGGGTGCTGCGGAAGGTTGCAGTCCATTCCCGTaGGCGCTGGTGCAGGAAGGA +
Preference number: 5 (lower is better)
Translates to: ILNVSPEVRPLMLGAAEGCSPFP*ALVQEG
Trigger: TCCTTCCTGCACCAGCGCCAACGGGAATGGACTGCA...ACCTTCCGCAGCACCCAGCATCAAAGGACGGACTTCAGGGGACACGTTTAGTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS CCA 90 bp ACCCAGTCACTAATCCTGCACACAAAGCCAGCCCTAGATGGAGGCTaGCAGCAAAGCCCTCTGGGTAAGGATGTTGCAGGCCTCGATTCT +
Preference number: 5 (lower is better)
Translates to: TQSLILHTKPALDGG*QQSPLGKDVAGLDS
Trigger: AGAATCGAGGCCTGCAACATCCTTACCCAGAGGGCTTTGCTGCCAGCCTCCATCTAGGGCTGGCTTTGTGTGCAGGATTAGTGACTGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682649.1
CDS-3UTR CAA 90 bp AACGTGTCCCCTGAAGTCCGTCCTTTGATGCTGGGTGCTGCGGAAGGTAAACAGGCCCGCCTCCCGTGTTaGGAATTGTTGTGCACAAAC +
Preference number: 5 (lower is better)
Translates to: NVSPEVRPLMLGAAEGKQARLPC*ELLCTN
Trigger: GTTTGTGCACAACAATTCCAAACACGGGAGGCGGGC...CTGTTTACCTTCCGCAGCACCCAGCATCAAAGGACGGACTTCAGGGGACACGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp AACGTGTCCCCTGAAGTCCGTCCTTTGATGCTGGGTGCTGCGGAAGGTAAACAGCGCCCAGGAGCACCTTaGCAGAACTGCTTGGATTTG +
Preference number: 5 (lower is better)
Translates to: NVSPEVRPLMLGAAEGKQRPGAP*QNCLDL
Trigger: CAAATCCAAGCAGTTCTGCAAAGGTGCTCCTGGGCG...CTGTTTACCTTCCGCAGCACCCAGCATCAAAGGACGGACTTCAGGGGACACGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp GAAGCTGGCAGGCGTTCTCAGTGCGTCCATGTGAGCTCTTTTGTAGATCAAACCCAGAAGTCCCTCACATaGGCGGGACTACCAGCCCAG +
Preference number: 5 (lower is better)
Translates to: EAGRRSQCVHVSSFVDQTQKSLT*AGLPAQ
Trigger: CTGGGCTGGTAGTCCCGCCAATGTGAGGGACTTCTG...GGTTTGATCTACAAAAGAGCTCACATGGACGCACTGAGAACGCCTGCCAGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS TCA 90 bp GGGGTGACGCCGAGGAGGGGGCAGCACTCCTCGGCAAAGCCTTATTaGGACACACGCTTTACATCTGCGGAATCTCATCTCTCATTTCTA +
Preference number: 5 (lower is better)
Translates to: GVTPRRGQHSSAKPY*DTRFTSAESHLSFL
Trigger: TAGAAATGAGAGATGAGATTCCGCAGATGTAAAGCGTGTGTCTCAATAAGGCTTTGCCGAGGAGTGCTGCCCCCTCCTCGGCGTCACCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000682649.1
CDS-3UTR CAA 90 bp AACGTGTCCCCTGAAGTCCGTCCTTTGATGCTGGGTGCTGCGGAAGGTAAACAGTGTTGTTGTTGTTGTTaGCAGGCGCGCTCAACGTGG +
Preference number: 5 (lower is better)
Translates to: NVSPEVRPLMLGAAEGKQCCCCC*QARSTW
Trigger: CCACGTTGAGCGCGCCTGCAAACAACAACAACAACA...CTGTTTACCTTCCGCAGCACCCAGCATCAAAGGACGGACTTCAGGGGACACGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp GAGACAAGTTCTTGGCTAATGCTCTTCCCAGTATCACAACACCAGGCCGTGATCCGGCGGCGCTTGTTGTaGTTGTTGTTTGCAGGCGCG +
Preference number: 5 (lower is better)
Translates to: ETSSWLMLFPVSQHQAVIRRRLL*LLFAGA
Trigger: CGCGCCTGCAAACAACAACAACAACAAGCGCCGCCG...GATCACGGCCTGGTGTTGTGATACTGGGAAGAGCATTAGCCAAGAACTTGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp GAGACAAGTTCTTGGCTAATGCTCTTCCCAGTATCACAACACCAGGCCGTGATCTGGCTGCTGAAGGAGTaGACGCCCATCATGCCCGTG +
Preference number: 5 (lower is better)
Translates to: ETSSWLMLFPVSQHQAVIWLLKE*TPIMPV
Trigger: CACGGGCATGATGGGCGTCAACTCCTTCAGCAGCCA...GATCACGGCCTGGTGTTGTGATACTGGGAAGAGCATTAGCCAAGAACTTGTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp ATAAGGACACAGCCCCAAACGGTGTCACCTCTTCGCGGCCGCTCCACATGCACAATGGCTCATACCTCCTaGGCCCTCTTTTTATCACCA +
Preference number: 5 (lower is better)
Translates to: IRTQPQTVSPLRGRSTCTMAHTS*ALFLSP
Trigger: TGGTGATAAAAAGAGGGCCAAGGAGGTATGAGCCAT...TGTGCATGTGGAGCGGCCGCGAAGAGGTGACACCGTTTGGGGCTGTGTCCTTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp ATAAGGACACAGCCCCAAACGGTGTCACCTCTTCGCGGCCGCTCCACATGCACAGTACGGACAGTGCTGTaGGAACTGACCACAAAAATG +
Preference number: 5 (lower is better)
Translates to: IRTQPQTVSPLRGRSTCTVRTVL*ELTTKM
Trigger: CATTTTTGTGGTCAGTTCCAACAGCACTGTCCGTAC...TGTGCATGTGGAGCGGCCGCGAAGAGGTGACACCGTTTGGGGCTGTGTCCTTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp GGACACAGCCCCAAACGGTGTCACCTCTTCGCGGCCGCTCCACATGCACAGAATGATTTCTGCTGCAGTTaGCAAAATGTTTGCTGTGCC +
Preference number: 5 (lower is better)
Translates to: GHSPKRCHLFAAAPHAQNDFCCS*QNVCCA
Trigger: GGCACAGCAAACATTTTGCAAACTGCAGCAGAAATC...ATTCTGTGCATGTGGAGCGGCCGCGAAGAGGTGACACCGTTTGGGGCTGTGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp ATACTAAACGTGTCCCCTGAAGTCCGTCCTTTGATGCTGGGTGCTGCGGAAGGTCGCTTGTTGTTGTTGTaGTTTGCAGGCGCGCTCAAC +
Preference number: 5 (lower is better)
Translates to: ILNVSPEVRPLMLGAAEGRLLLL*FAGALN
Trigger: GTTGAGCGCGCCTGCAAACAACAACAACAACAAGCG...ACCTTCCGCAGCACCCAGCATCAAAGGACGGACTTCAGGGGACACGTTTAGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp GAAGCTGGCAGGCGTTCTCAGTGCGTCCATGTGAGCTCTTTTGTAGATCAAACCCTGGGACTGATGGCCTaGATGCACGGAGTGGCATTT +
Preference number: 5 (lower is better)
Translates to: EAGRRSQCVHVSSFVDQTLGLMA*MHGVAF
Trigger: AAATGCCACTCCGTGCATCAAGGCCATCAGTCCCAG...GGTTTGATCTACAAAAGAGCTCACATGGACGCACTGAGAACGCCTGCCAGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440978.2
CDS-3UTR CAA 90 bp ATAAGGACACAGCCCCAAACGGTGTCACCTCTTCGCGGCCGCTCCACATGCACAAGTTCCGAATACAACTaGCAGCCCGTCAAAGAAGTT +
Preference number: 5 (lower is better)
Translates to: IRTQPQTVSPLRGRSTCTSSEYN*QPVKEV
Trigger: AACTTCTTTGACGGGCTGCAAGTTGTATTCGGAACT...TGTGCATGTGGAGCGGCCGCGAAGAGGTGACACCGTTTGGGGCTGTGTCCTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp GAAGCTGGCAGGCGTTCTCAGTGCGTCCATGTGAGCTCTTTTGTAGATCAAACCCGCCCAGGAGCACCTTaGCAGAACTGCTTGGATTTG +
Preference number: 5 (lower is better)
Translates to: EAGRRSQCVHVSSFVDQTRPGAP*QNCLDL
Trigger: CAAATCCAAGCAGTTCTGCAAAGGTGCTCCTGGGCG...GGTTTGATCTACAAAAGAGCTCACATGGACGCACTGAGAACGCCTGCCAGCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp GAAGGATCTAGAAGTCAAAAGGACAATTTCTGGTACAAGAAACATAGACCTCACAGGAGGAGGAGAGGCTaGGGGCCGGACCACGGGCGC +
Preference number: 5 (lower is better)
Translates to: EGSRSQKDNFWYKKHRPHRRRRG*GPDHGR
Trigger: GCGCCCGTGGTCCGGCCCCAAGCCTCTCCTCCTCCT...GTGAGGTCTATGTTTCTTGTACCAGAAATTGTCCTTTTGACTTCTAGATCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp ATACTAAACGTGTCCCCTGAAGTCCGTCCTTTGATGCTGGGTGCTGCGGAAGGTGGTCTCACTGTGGGTTaGGCACTAAGAGGCACGATA +
Preference number: 5 (lower is better)
Translates to: ILNVSPEVRPLMLGAAEGGLTVG*ALRGTI
Trigger: TATCGTGCCTCTTAGTGCCAAACCCACAGTGAGACC...ACCTTCCGCAGCACCCAGCATCAAAGGACGGACTTCAGGGGACACGTTTAGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp GAAGCTGGCAGGCGTTCTCAGTGCGTCCATGTGAGCTCTTTTGTAGATCAAACCCGCTTGTTGTTGTTGTaGTTTGCAGGCGCGCTCAAC +
Preference number: 5 (lower is better)
Translates to: EAGRRSQCVHVSSFVDQTRLLLL*FAGALN
Trigger: GTTGAGCGCGCCTGCAAACAACAACAACAACAAGCG...GGTTTGATCTACAAAAGAGCTCACATGGACGCACTGAGAACGCCTGCCAGCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp ACATTAGGGAAGAAGGATCTAGAAGTCAAAAGGACAATTTCTGGTACAAGAAACAGGAGGAGGAGAGGCTaGGGGCCGGACCACGGGCGC +
Preference number: 5 (lower is better)
Translates to: TLGKKDLEVKRTISGTRNRRRRG*GPDHGR
Trigger: GCGCCCGTGGTCCGGCCCCAAGCCTCTCCTCCTCCT...GTTTCTTGTACCAGAAATTGTCCTTTTGACTTCTAGATCCTTCTTCCCTAATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp GCACTAAGAGGCACGATATCTGAAGGAGGTCATTCCAGTTTTAAAAGTACGGACCCGCGGCGGCGCTTGTaGTTGTTGTTGTTTGCAGGC +
Preference number: 5 (lower is better)
Translates to: ALRGTISEGGHSSFKSTDPRRRL*LLLFAG
Trigger: GCCTGCAAACAACAACAACAACAAGCGCCGCCGCGG...GTCCGTACTTTTAAAACTGGAATGACCTCCTTCAGATATCGTGCCTCTTAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp ACTTGCTTAACAGGAAGCTCTAGCAGTGGGAGAATATTGGAACCAACAGACAGTCCGCGGCGGCGCTTGTaGTTGTTGTTGTTTGCAGGC +
Preference number: 5 (lower is better)
Translates to: TCLTGSSSSGRILEPTDSPRRRL*LLLFAG
Trigger: GCCTGCAAACAACAACAACAACAAGCGCCGCCGCGG...ACTGTCTGTTGGTTCCAATATTCTCCCACTGCTAGAGCTTCCTGTTAAGCAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp ACTTGCTTAACAGGAAGCTCTAGCAGTGGGAGAATATTGGAACCAACAGACAGTTGGCTGCTGAAGGAGTaGACGCCCATCATGCCCGTG +
Preference number: 5 (lower is better)
Translates to: TCLTGSSSSGRILEPTDSWLLKE*TPIMPV
Trigger: CACGGGCATGATGGGCGTCAACTCCTTCAGCAGCCA...ACTGTCTGTTGGTTCCAATATTCTCCCACTGCTAGAGCTTCCTGTTAAGCAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp GCACTAAGAGGCACGATATCTGAAGGAGGTCATTCCAGTTTTAAAAGTACGGACGACGTCTCTGACACGTaGACGGCTAGCTGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: ALRGTISEGGHSSFKSTDDVSDT*TASWLL
Trigger: CAGCAGCCAGCTAGCCGTCAACGTGTCAGAGACGTC...GTCCGTACTTTTAAAACTGGAATGACCTCCTTCAGATATCGTGCCTCTTAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp ATGCTCTTCCCAGTATCACAACACCAGGCCGTGATCAAAAACCAATACAGACAAGACGTCTCTGACACGTaGACGGCTAGCTGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: MLFPVSQHQAVIKNQYRQDVSDT*TASWLL
Trigger: CAGCAGCCAGCTAGCCGTCAACGTGTCAGAGACGTC...TTGTCTGTATTGGTTTTTGATCACGGCCTGGTGTTGTGATACTGGGAAGAGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp TTACTAGACATGGCCAAGACGGAGTCGGAAACTTTATACAAAATAGGCGTCGCTGCGGGGACACGCTGCTaGTATTGCGACTGTAGCCGA +
Preference number: 5 (lower is better)
Translates to: LLDMAKTESETLYKIGVAAGTRC*YCDCSR
Trigger: TCGGCTACAGTCGCAATACAAGCAGCGTGTCCCCGC...AGCGACGCCTATTTTGTATAAAGTTTCCGACTCCGTCTTGGCCATGTCTAGTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp GCACTAAGAGGCACGATATCTGAAGGAGGTCATTCCAGTTTTAAAAGTACGGACTGCAGTCCATTCCCGTaGGCGCTGGTGCAGGAAGGA +
Preference number: 5 (lower is better)
Translates to: ALRGTISEGGHSSFKSTDCSPFP*ALVQEG
Trigger: TCCTTCCTGCACCAGCGCCAACGGGAATGGACTGCA...GTCCGTACTTTTAAAACTGGAATGACCTCCTTCAGATATCGTGCCTCTTAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp GCTAATGCTCTTCCCAGTATCACAACACCAGGCCGTGATCAAAAACCAATACAGCAGCCCAGACATAGCTaGCAGTCCATTCCCGTTGGC +
Preference number: 5 (lower is better)
Translates to: ANALPSITTPGRDQKPIQQPRHS*QSIPVG
Trigger: GCCAACGGGAATGGACTGCAAGCTATGTCTGGGCTG...CTGTATTGGTTTTTGATCACGGCCTGGTGTTGTGATACTGGGAAGAGCATTAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000368648.8
CDS-3UTR CAA 90 bp ATAAGGACACAGCCCCAAACGGTGTCACCTCTTCGCGGCCGCTCCACATGCACAAAAATAGGCGTCGCTTaGTTTTCCTTATTCTTCAGG +
Preference number: 5 (lower is better)
Translates to: IRTQPQTVSPLRGRSTCTKIGVA*FSLFFR
Trigger: CCTGAAGAATAAGGAAAACAAAGCGACGCCTATTTT...TGTGCATGTGGAGCGGCCGCGAAGAGGTGACACCGTTTGGGGCTGTGTCCTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp AACGTGTCCCCTGAAGTCCGTCCTTTGATGCTGGGTGCTGCGGAAGGTAAACAGCAGTTTGCAAAATGTTaGCTGTGCCGTGTCTGCAAA +
Preference number: 5 (lower is better)
Translates to: NVSPEVRPLMLGAAEGKQQFAKC*LCRVCK
Trigger: TTTGCAGACACGGCACAGCAAACATTTTGCAAACTG...CTGTTTACCTTCCGCAGCACCCAGCATCAAAGGACGGACTTCAGGGGACACGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp ACTTGCTTAACAGGAAGCTCTAGCAGTGGGAGAATATTGGAACCAACAGACAGTACCCAGCAGAGAGCCTaGCAGTCCATTCCCGTTGGC +
Preference number: 5 (lower is better)
Translates to: TCLTGSSSSGRILEPTDSTQQRA*QSIPVG
Trigger: GCCAACGGGAATGGACTGCAAGGCTCTCTGCTGGGT...ACTGTCTGTTGGTTCCAATATTCTCCCACTGCTAGAGCTTCCTGTTAAGCAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000440978.2
CDS-3UTR CAA 90 bp GCACTAAGAGGCACGATATCTGAAGGAGGTCATTCCAGTTTTAAAAGTACGGACCGGCGCTTGTTGTTGTaGTTGTTTGCAGGCGCGCTC +
Preference number: 5 (lower is better)
Translates to: ALRGTISEGGHSSFKSTDRRLLL*LFAGAL
Trigger: GAGCGCGCCTGCAAACAACAACAACAACAAGCGCCG...GTCCGTACTTTTAAAACTGGAATGACCTCCTTCAGATATCGTGCCTCTTAGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp TTACTAGACATGGCCAAGACGGAGTCGGAAACTTTATACAAAATAGGCGTCGCTCGGCGCTTGTTGTTGTaGTTGTTTGCAGGCGCGCTC +
Preference number: 5 (lower is better)
Translates to: LLDMAKTESETLYKIGVARRLLL*LFAGAL
Trigger: GAGCGCGCCTGCAAACAACAACAACAACAAGCGCCG...AGCGACGCCTATTTTGTATAAAGTTTCCGACTCCGTCTTGGCCATGTCTAGTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp TTTCCATCAGCATGTCTTAATATACTAAACGTGTCCCCTGAAGTCCGTCCTTTGGCGGGGACACGCTGCTaGTATTGCGACTGTAGCCGA +
Preference number: 5 (lower is better)
Translates to: FPSACLNILNVSPEVRPLAGTRC*YCDCSR
Trigger: TCGGCTACAGTCGCAATACAAGCAGCGTGTCCCCGC...CAAAGGACGGACTTCAGGGGACACGTTTAGTATATTAAGACATGCTGATGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp TTTCCATCAGCATGTCTTAATATACTAAACGTGTCCCCTGAAGTCCGTCCTTTGCAGAAGTCCCTCACATaGGCGGGACTACCAGCCCAG +
Preference number: 5 (lower is better)
Translates to: FPSACLNILNVSPEVRPLQKSLT*AGLPAQ
Trigger: CTGGGCTGGTAGTCCCGCCAATGTGAGGGACTTCTG...CAAAGGACGGACTTCAGGGGACACGTTTAGTATATTAAGACATGCTGATGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp GAAGCTGGCAGGCGTTCTCAGTGCGTCCATGTGAGCTCTTTTGTAGATCAAACCAGCAGTGGGAGAATATaGGAACCAACAGACAGTAGC +
Preference number: 5 (lower is better)
Translates to: EAGRRSQCVHVSSFVDQTSSGRI*EPTDSS
Trigger: GCTACTGTCTGTTGGTTCCAATATTCTCCCACTGCT...GGTTTGATCTACAAAAGAGCTCACATGGACGCACTGAGAACGCCTGCCAGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp ATACTGTTTCCATCAGCATGTCTTAATATACTAAACGTGTCCCCTGAAGTCCGTCGGCGGCGCTTGTTGTaGTTGTTGTTTGCAGGCGCG +
Preference number: 5 (lower is better)
Translates to: ILFPSACLNILNVSPEVRRRRLL*LLFAGA
Trigger: CGCGCCTGCAAACAACAACAACAACAAGCGCCGCCG...ACGGACTTCAGGGGACACGTTTAGTATATTAAGACATGCTGATGGAAACAGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp TTACTAGACATGGCCAAGACGGAGTCGGAAACTTTATACAAAATAGGCGTCGCTCGCCCAGGAGCACCTTaGCAGAACTGCTTGGATTTG +
Preference number: 5 (lower is better)
Translates to: LLDMAKTESETLYKIGVARPGAP*QNCLDL
Trigger: CAAATCCAAGCAGTTCTGCAAAGGTGCTCCTGGGCG...AGCGACGCCTATTTTGTATAAAGTTTCCGACTCCGTCTTGGCCATGTCTAGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp GCTAATGCTCTTCCCAGTATCACAACACCAGGCCGTGATCAAAAACCAATACAGGATCACCCGGATGTCTaGGGATCACTTTCTGCAACC +
Preference number: 5 (lower is better)
Translates to: ANALPSITTPGRDQKPIQDHPDV*GSLSAT
Trigger: GGTTGCAGAAAGTGATCCCAAGACATCCGGGTGATC...CTGTATTGGTTTTTGATCACGGCCTGGTGTTGTGATACTGGGAAGAGCATTAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp GAGACAAGTTCTTGGCTAATGCTCTTCCCAGTATCACAACACCAGGCCGTGATCTTCAGTAACACCTCCTaGGGTAACCTTTCGGGATCA +
Preference number: 5 (lower is better)
Translates to: ETSSWLMLFPVSQHQAVIFSNTS*GNLSGS
Trigger: TGATCCCGAAAGGTTACCCAAGGAGGTGTTACTGAA...GATCACGGCCTGGTGTTGTGATACTGGGAAGAGCATTAGCCAAGAACTTGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp TTTCCATCAGCATGTCTTAATATACTAAACGTGTCCCCTGAAGTCCGTCCTTTGCAGCCCAGACATAGCTaGCAGTCCATTCCCGTTGGC +
Preference number: 5 (lower is better)
Translates to: FPSACLNILNVSPEVRPLQPRHS*QSIPVG
Trigger: GCCAACGGGAATGGACTGCAAGCTATGTCTGGGCTG...CAAAGGACGGACTTCAGGGGACACGTTTAGTATATTAAGACATGCTGATGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355311.10
ENST00000368648.8
CDS-3UTR CAA 90 bp ATACTAAACGTGTCCCCTGAAGTCCGTCCTTTGATGCTGGGTGCTGCGGAAGGTCTGTCAGTGTGCTTGTaGAAGGCAAGAGAATTCAAT +
Preference number: 5 (lower is better)
Translates to: ILNVSPEVRPLMLGAAEGLSVCL*KAREFN
Trigger: ATTGAATTCTCTTGCCTTCAACAAGCACACTGACAG...ACCTTCCGCAGCACCCAGCATCAAAGGACGGACTTCAGGGGACACGTTTAGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp GAGACAAGTTCTTGGCTAATGCTCTTCCCAGTATCACAACACCAGGCCGTGATCGTACGGACAGTGCTGTaGGAACTGACCACAAAAATG +
Preference number: 5 (lower is better)
Translates to: ETSSWLMLFPVSQHQAVIVRTVL*ELTTKM
Trigger: CATTTTTGTGGTCAGTTCCAACAGCACTGTCCGTAC...GATCACGGCCTGGTGTTGTGATACTGGGAAGAGCATTAGCCAAGAACTTGTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp GCTAATGCTCTTCCCAGTATCACAACACCAGGCCGTGATCAAAAACCAATACAGGGTCTCACTGTGGGTTaGGCACTAAGAGGCACGATA +
Preference number: 5 (lower is better)
Translates to: ANALPSITTPGRDQKPIQGLTVG*ALRGTI
Trigger: TATCGTGCCTCTTAGTGCCAAACCCACAGTGAGACC...CTGTATTGGTTTTTGATCACGGCCTGGTGTTGTGATACTGGGAAGAGCATTAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp GAAGCTGGCAGGCGTTCTCAGTGCGTCCATGTGAGCTCTTTTGTAGATCAAACCGATTTCTGCTGCAGTTaGCAAAATGTTTGCTGTGCC +
Preference number: 5 (lower is better)
Translates to: EAGRRSQCVHVSSFVDQTDFCCS*QNVCCA
Trigger: GGCACAGCAAACATTTTGCAAACTGCAGCAGAAATC...GGTTTGATCTACAAAAGAGCTCACATGGACGCACTGAGAACGCCTGCCAGCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp GACGGAGTCGGAAACTTTATACAAAATAGGCGTCGCTTTGTTTTCCTTATTCTTCGGCGGCGCTTGTTGTaGTTGTTGTTTGCAGGCGCG +
Preference number: 5 (lower is better)
Translates to: DGVGNFIQNRRRFVFLILRRRLL*LLFAGA
Trigger: CGCGCCTGCAAACAACAACAACAACAAGCGCCGCCG...AAGAATAAGGAAAACAAAGCGACGCCTATTTTGTATAAAGTTTCCGACTCCGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp CAAAGAGACAAGTTCTTGGCTAATGCTCTTCCCAGTATCACAACACCAGGCCGTGCGAACATACAGATCTaGCTCTGTTCTGACTCCGTT +
Preference number: 5 (lower is better)
Translates to: QRDKFLANALPSITTPGRANIQI*LCSDSV
Trigger: AACGGAGTCAGAACAGAGCAAGATCTGTATGTTCGC...ACGGCCTGGTGTTGTGATACTGGGAAGAGCATTAGCCAAGAACTTGTCTCTTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp TTACTAGACATGGCCAAGACGGAGTCGGAAACTTTATACAAAATAGGCGTCGCTACGTGGCCGTCCACGTaGACTGTTGTCGATACAACA +
Preference number: 5 (lower is better)
Translates to: LLDMAKTESETLYKIGVATWPST*TVVDTT
Trigger: TGTTGTATCGACAACAGTCAACGTGGACGGCCACGT...AGCGACGCCTATTTTGTATAAAGTTTCCGACTCCGTCTTGGCCATGTCTAGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp TTTCCATCAGCATGTCTTAATATACTAAACGTGTCCCCTGAAGTCCGTCCTTTGCTGGGACTGATGGCCTaGATGCACGGAGTGGCATTT +
Preference number: 5 (lower is better)
Translates to: FPSACLNILNVSPEVRPLLGLMA*MHGVAF
Trigger: AAATGCCACTCCGTGCATCAAGGCCATCAGTCCCAG...CAAAGGACGGACTTCAGGGGACACGTTTAGTATATTAAGACATGCTGATGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355311.10
ENST00000440978.2
CDS-3UTR CAA 90 bp GGATCTAGAAGTCAAAAGGACAATTTCTGGTACAAGAAACATAGACCTCACAGTGCGGGGACACGCTGCTaGTATTGCGACTGTAGCCGA +
Preference number: 5 (lower is better)
Translates to: GSRSQKDNFWYKKHRPHSAGTRC*YCDCSR
Trigger: TCGGCTACAGTCGCAATACAAGCAGCGTGTCCCCGC...ACTGTGAGGTCTATGTTTCTTGTACCAGAAATTGTCCTTTTGACTTCTAGATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp GAAGGATCTAGAAGTCAAAAGGACAATTTCTGGTACAAGAAACATAGACCTCACTGCAGTCCATTCCCGTaGGCGCTGGTGCAGGAAGGA +
Preference number: 5 (lower is better)
Translates to: EGSRSQKDNFWYKKHRPHCSPFP*ALVQEG
Trigger: TCCTTCCTGCACCAGCGCCAACGGGAATGGACTGCA...GTGAGGTCTATGTTTCTTGTACCAGAAATTGTCCTTTTGACTTCTAGATCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp ATACTGTTTCCATCAGCATGTCTTAATATACTAAACGTGTCCCCTGAAGTCCGTCCTGAAGTCCGTCCTTaGATGCTGGGTGCTGCGGAA +
Preference number: 5 (lower is better)
Translates to: ILFPSACLNILNVSPEVRPEVRP*MLGAAE
Trigger: TTCCGCAGCACCCAGCATCAAAGGACGGACTTCAGG...ACGGACTTCAGGGGACACGTTTAGTATATTAAGACATGCTGATGGAAACAGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp GCTAATGCTCTTCCCAGTATCACAACACCAGGCCGTGATCAAAAACCAATACAGAAAACCAGCAGTGATTaGGGTCCCCCTGAAACCTCT +
Preference number: 5 (lower is better)
Translates to: ANALPSITTPGRDQKPIQKTSSD*GPPETS
Trigger: AGAGGTTTCAGGGGGACCCAAATCACTGCTGGTTTT...CTGTATTGGTTTTTGATCACGGCCTGGTGTTGTGATACTGGGAAGAGCATTAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS CCA 90 bp TTACTTAGGACCCACTCTGACCCTTGTAAAGCAGCCTCAGATGGCTaGCTTAACCATGATGAATCGCTTGGCAGTTTAATTTACATGCCG +
Preference number: 5 (lower is better)
Translates to: LLRTHSDPCKAASDG*LNHDESLGSLIYMP
Trigger: CGGCATGTAAATTAAACTGCCAAGCGATTCATCATGGTTAAGCCAGCCATCTGAGGCTGCTTTACAAGGGTCAGAGTGGGTCCTAAGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682649.1
CDS-3UTR CAA 90 bp TTTTCCAGTCTGATGGCTCATACCTCCTTGGCCCTCTTTTTATCACCACAAAAATGTTGTTGTTGTTGTTaGCAGGCGCGCTCAACGTGG +
Preference number: 5 (lower is better)
Translates to: FSSLMAHTSLALFLSPQKCCCCC*QARSTW
Trigger: CCACGTTGAGCGCGCCTGCAAACAACAACAACAACA...TTTTTGTGGTGATAAAAAGAGGGCCAAGGAGGTATGAGCCATCAGACTGGAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp GACGGAGTCGGAAACTTTATACAAAATAGGCGTCGCTTTGTTTTCCTTATTCTTCGGCGCTTGTTGTTGTaGTTGTTTGCAGGCGCGCTC +
Preference number: 5 (lower is better)
Translates to: DGVGNFIQNRRRFVFLILRRLLL*LFAGAL
Trigger: GAGCGCGCCTGCAAACAACAACAACAACAAGCGCCG...AAGAATAAGGAAAACAAAGCGACGCCTATTTTGTATAAAGTTTCCGACTCCGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp GAAGGATCTAGAAGTCAAAAGGACAATTTCTGGTACAAGAAACATAGACCTCACTGGCCGCGGCGGCGCTaGTTGTTGTTGTTGTTTGCA +
Preference number: 5 (lower is better)
Translates to: EGSRSQKDNFWYKKHRPHWPRRR*LLLLFA
Trigger: TGCAAACAACAACAACAACAAGCGCCGCCGCGGCCA...GTGAGGTCTATGTTTCTTGTACCAGAAATTGTCCTTTTGACTTCTAGATCCTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp TTTTCCAGTCTGATGGCTCATACCTCCTTGGCCCTCTTTTTATCACCACAAAAAACGTGGCCGTCCACGTaGACTGTTGTCGATACAACA +
Preference number: 5 (lower is better)
Translates to: FSSLMAHTSLALFLSPQKTWPST*TVVDTT
Trigger: TGTTGTATCGACAACAGTCAACGTGGACGGCCACGT...TTTTTGTGGTGATAAAAAGAGGGCCAAGGAGGTATGAGCCATCAGACTGGAAAA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp ATAGGCGTCGCTTTGTTTTCCTTATTCTTCAGGACTGAGAAATGTGAAAATATGTGGCTGCTGAAGGAGTaGACGCCCATCATGCCCGTG +
Preference number: 5 (lower is better)
Translates to: IGVALFSLFFRTEKCENMWLLKE*TPIMPV
Trigger: CACGGGCATGATGGGCGTCAACTCCTTCAGCAGCCA...CATATTTTCACATTTCTCAGTCCTGAAGAATAAGGAAAACAAAGCGACGCCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp ATAGGCGTCGCTTTGTTTTCCTTATTCTTCAGGACTGAGAAATGTGAAAATATGGACGTCTCTGACACGTaGACGGCTAGCTGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: IGVALFSLFFRTEKCENMDVSDT*TASWLL
Trigger: CAGCAGCCAGCTAGCCGTCAACGTGTCAGAGACGTC...CATATTTTCACATTTCTCAGTCCTGAAGAATAAGGAAAACAAAGCGACGCCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp ATAGGCGTCGCTTTGTTTTCCTTATTCTTCAGGACTGAGAAATGTGAAAATATGCAGAAGTCCCTCACATaGGCGGGACTACCAGCCCAG +
Preference number: 5 (lower is better)
Translates to: IGVALFSLFFRTEKCENMQKSLT*AGLPAQ
Trigger: CTGGGCTGGTAGTCCCGCCAATGTGAGGGACTTCTG...CATATTTTCACATTTCTCAGTCCTGAAGAATAAGGAAAACAAAGCGACGCCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp GCTAATGCTCTTCCCAGTATCACAACACCAGGCCGTGATCAAAAACCAATACAGATGGCTCATACCTCCTaGGCCCTCTTTTTATCACCA +
Preference number: 5 (lower is better)
Translates to: ANALPSITTPGRDQKPIQMAHTS*ALFLSP
Trigger: TGGTGATAAAAAGAGGGCCAAGGAGGTATGAGCCAT...CTGTATTGGTTTTTGATCACGGCCTGGTGTTGTGATACTGGGAAGAGCATTAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS GCA 90 bp TCTCTCAGAAGCAACACTATTCGCGTGCATCCAAAACAATGTGTGTaGAATGTATTGGCTTTCTGTCGCCCCACAATTACCCATCAAACC +
Preference number: 5 (lower is better)
Translates to: SLRSNTIRVHPKQCV*NVLAFCRPTITHQT
Trigger: GGTTTGATGGGTAATTGTGGGGCGACAGAAAGCCAATACATTGCACACACATTGTTTTGGATGCACGCGAATAGTGTTGCTTCTGAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682649.1
CDS-3UTR CAA 90 bp TTACTAGACATGGCCAAGACGGAGTCGGAAACTTTATACAAAATAGGCGTCGCTGCGAACATACAGATCTaGCTCTGTTCTGACTCCGTT +
Preference number: 5 (lower is better)
Translates to: LLDMAKTESETLYKIGVAANIQI*LCSDSV
Trigger: AACGGAGTCAGAACAGAGCAAGATCTGTATGTTCGC...AGCGACGCCTATTTTGTATAAAGTTTCCGACTCCGTCTTGGCCATGTCTAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp GCACTAAGAGGCACGATATCTGAAGGAGGTCATTCCAGTTTTAAAAGTACGGACGCGAACATACAGATCTaGCTCTGTTCTGACTCCGTT +
Preference number: 5 (lower is better)
Translates to: ALRGTISEGGHSSFKSTDANIQI*LCSDSV
Trigger: AACGGAGTCAGAACAGAGCAAGATCTGTATGTTCGC...GTCCGTACTTTTAAAACTGGAATGACCTCCTTCAGATATCGTGCCTCTTAGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp GAAGGATCTAGAAGTCAAAAGGACAATTTCTGGTACAAGAAACATAGACCTCACGCCCGCCTCCCGTGTTaGGAATTGTTGTGCACAAAC +
Preference number: 5 (lower is better)
Translates to: EGSRSQKDNFWYKKHRPHARLPC*ELLCTN
Trigger: GTTTGTGCACAACAATTCCAAACACGGGAGGCGGGC...GTGAGGTCTATGTTTCTTGTACCAGAAATTGTCCTTTTGACTTCTAGATCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp GGATCTAGAAGTCAAAAGGACAATTTCTGGTACAAGAAACATAGACCTCACAGTGCCCGCCTCCCGTGTTaGGAATTGTTGTGCACAAAC +
Preference number: 5 (lower is better)
Translates to: GSRSQKDNFWYKKHRPHSARLPC*ELLCTN
Trigger: GTTTGTGCACAACAATTCCAAACACGGGAGGCGGGC...ACTGTGAGGTCTATGTTTCTTGTACCAGAAATTGTCCTTTTGACTTCTAGATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp ACTTGCTTAACAGGAAGCTCTAGCAGTGGGAGAATATTGGAACCAACAGACAGTAGCCCGTCAAAGAAGTaGTCGCCAATTATGATGACG +
Preference number: 5 (lower is better)
Translates to: TCLTGSSSSGRILEPTDSSPSKK*SPIMMT
Trigger: CGTCATCATAATTGGCGACAACTTCTTTGACGGGCT...ACTGTCTGTTGGTTCCAATATTCTCCCACTGCTAGAGCTTCCTGTTAAGCAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp ATGCTCTTCCCAGTATCACAACACCAGGCCGTGATCAAAAACCAATACAGACAAAGCCCGTCAAAGAAGTaGTCGCCAATTATGATGACG +
Preference number: 5 (lower is better)
Translates to: MLFPVSQHQAVIKNQYRQSPSKK*SPIMMT
Trigger: CGTCATCATAATTGGCGACAACTTCTTTGACGGGCT...TTGTCTGTATTGGTTTTTGATCACGGCCTGGTGTTGTGATACTGGGAAGAGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp ACTTGCTTAACAGGAAGCTCTAGCAGTGGGAGAATATTGGAACCAACAGACAGTTTCAGTAACACCTCCTaGGGTAACCTTTCGGGATCA +
Preference number: 5 (lower is better)
Translates to: TCLTGSSSSGRILEPTDSFSNTS*GNLSGS
Trigger: TGATCCCGAAAGGTTACCCAAGGAGGTGTTACTGAA...ACTGTCTGTTGGTTCCAATATTCTCCCACTGCTAGAGCTTCCTGTTAAGCAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp ATGCTCTTCCCAGTATCACAACACCAGGCCGTGATCAAAAACCAATACAGACAATTCAGTAACACCTCCTaGGGTAACCTTTCGGGATCA +
Preference number: 5 (lower is better)
Translates to: MLFPVSQHQAVIKNQYRQFSNTS*GNLSGS
Trigger: TGATCCCGAAAGGTTACCCAAGGAGGTGTTACTGAA...TTGTCTGTATTGGTTTTTGATCACGGCCTGGTGTTGTGATACTGGGAAGAGCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp TTACTAGACATGGCCAAGACGGAGTCGGAAACTTTATACAAAATAGGCGTCGCTAGCAGTGGGAGAATATaGGAACCAACAGACAGTAGC +
Preference number: 5 (lower is better)
Translates to: LLDMAKTESETLYKIGVASSGRI*EPTDSS
Trigger: GCTACTGTCTGTTGGTTCCAATATTCTCCCACTGCT...AGCGACGCCTATTTTGTATAAAGTTTCCGACTCCGTCTTGGCCATGTCTAGTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp ATAGGCGTCGCTTTGTTTTCCTTATTCTTCAGGACTGAGAAATGTGAAAATATGCTGGGACTGATGGCCTaGATGCACGGAGTGGCTTCT +
Preference number: 5 (lower is better)
Translates to: IGVALFSLFFRTEKCENMLGLMA*MHGVAS
Trigger: AGAAGCCACTCCGTGCATCAAGGCCATCAGTCCCAG...CATATTTTCACATTTCTCAGTCCTGAAGAATAAGGAAAACAAAGCGACGCCTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000368648.8
CDS-3UTR CAA 90 bp GAAGGATCTAGAAGTCAAAAGGACAATTTCTGGTACAAGAAACATAGACCTCACCACAAAAGGGCCAGTTaGTCTTCTCCGCGGCTACGT +
Preference number: 5 (lower is better)
Translates to: EGSRSQKDNFWYKKHRPHHKRAS*SSPRLR
Trigger: ACGTAGCCGCGGAGAAGACAAACTGGCCCTTTTGTG...GTGAGGTCTATGTTTCTTGTACCAGAAATTGTCCTTTTGACTTCTAGATCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000440978.2
CDS-3UTR CAA 90 bp GACGGAGTCGGAAACTTTATACAAAATAGGCGTCGCTTTGTTTTCCTTATTCTTTGTTGTTGTTGTTGTTaGCAGGCGCGCTCAACGTGG +
Preference number: 5 (lower is better)
Translates to: DGVGNFIQNRRRFVFLILCCCCC*QARSTW
Trigger: CCACGTTGAGCGCGCCTGCAAACAACAACAACAACA...AAGAATAAGGAAAACAAAGCGACGCCTATTTTGTATAAAGTTTCCGACTCCGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp CAAAGAGACAAGTTCTTGGCTAATGCTCTTCCCAGTATCACAACACCAGGCCGTTTGTTGGTTTTCTCGTaGTTTGGCTCTTTCTCTTTC +
Preference number: 5 (lower is better)
Translates to: QRDKFLANALPSITTPGRLLVFS*FGSFSF
Trigger: GAAAGAGAAAGAGCCAAACAACGAGAAAACCAACAA...ACGGCCTGGTGTTGTGATACTGGGAAGAGCATTAGCCAAGAACTTGTCTCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp TTACTAGACATGGCCAAGACGGAGTCGGAAACTTTATACAAAATAGGCGTCGCTTCTGTTCTGACTCCGTaGCTGTACAATAACTGGAGT +
Preference number: 5 (lower is better)
Translates to: LLDMAKTESETLYKIGVASVLTP*LYNNWS
Trigger: ACTCCAGTTATTGTACAGCAACGGAGTCAGAACAGA...AGCGACGCCTATTTTGTATAAAGTTTCCGACTCCGTCTTGGCCATGTCTAGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp TGGAGGCATTTTTCATCAGCGTTTCATGATCATCAAAATGGTGCATTCACAAAGACGTGGCCGTCCACGTaGACTGTTGTCGATACAACA +
Preference number: 5 (lower is better)
Translates to: WRHFSSAFHDHQNGAFTKTWPST*TVVDTT
Trigger: TGTTGTATCGACAACAGTCAACGTGGACGGCCACGT...CTTTGTGAATGCACCATTTTGATGATCATGAAACGCTGATGAAAAATGCCTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp ATGCTCTTCCCAGTATCACAACACCAGGCCGTGATCAAAAACCAATACAGACAAAGTTCCGAATACAACTaGCAGCCCGTCAAAGAAGTT +
Preference number: 5 (lower is better)
Translates to: MLFPVSQHQAVIKNQYRQSSEYN*QPVKEV
Trigger: AACTTCTTTGACGGGCTGCAAGTTGTATTCGGAACT...TTGTCTGTATTGGTTTTTGATCACGGCCTGGTGTTGTGATACTGGGAAGAGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp TGGAGGCATTTTTCATCAGCGTTTCATGATCATCAAAATGGTGCATTCACAAAGGATCACCCGGATGTCTaGGGATCACTTTCTGCAACC +
Preference number: 5 (lower is better)
Translates to: WRHFSSAFHDHQNGAFTKDHPDV*GSLSAT
Trigger: GGTTGCAGAAAGTGATCCCAAGACATCCGGGTGATC...CTTTGTGAATGCACCATTTTGATGATCATGAAACGCTGATGAAAAATGCCTCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp TTTTCCAGTCTGATGGCTCATACCTCCTTGGCCCTCTTTTTATCACCACAAAAAAGCAGTGGGAGAATATaGGAACCAACAGACAGTAGC +
Preference number: 5 (lower is better)
Translates to: FSSLMAHTSLALFLSPQKSSGRI*EPTDSS
Trigger: GCTACTGTCTGTTGGTTCCAATATTCTCCCACTGCT...TTTTTGTGGTGATAAAAAGAGGGCCAAGGAGGTATGAGCCATCAGACTGGAAAA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp TTTCCATCAGCATGTCTTAATATACTAAACGTGTCCCCTGAAGTCCGTCCTTTGAAACACCTGACACTTTaGGTCTCACTGTGGGTTTGG +
Preference number: 5 (lower is better)
Translates to: FPSACLNILNVSPEVRPLKHLTL*VSLWVW
Trigger: CCAAACCCACAGTGAGACCAAAAGTGTCAGGTGTTT...CAAAGGACGGACTTCAGGGGACACGTTTAGTATATTAAGACATGCTGATGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp TTTCCATCAGCATGTCTTAATATACTAAACGTGTCCCCTGAAGTCCGTCCTTTGTCTGTTCTGACTCCGTaGCTGTACAATAACTGGAGT +
Preference number: 5 (lower is better)
Translates to: FPSACLNILNVSPEVRPLSVLTP*LYNNWS
Trigger: ACTCCAGTTATTGTACAGCAACGGAGTCAGAACAGA...CAAAGGACGGACTTCAGGGGACACGTTTAGTATATTAAGACATGCTGATGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp ACTTGCTTAACAGGAAGCTCTAGCAGTGGGAGAATATTGGAACCAACAGACAGTGGCGTTTCGTTTCTATaGCCACAACTTTTCTTGTCA +
Preference number: 5 (lower is better)
Translates to: TCLTGSSSSGRILEPTDSGVSFL*PQLFLS
Trigger: TGACAAGAAAAGTTGTGGCAATAGAAACGAAACGCC...ACTGTCTGTTGGTTCCAATATTCTCCCACTGCTAGAGCTTCCTGTTAAGCAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp TTACTAGACATGGCCAAGACGGAGTCGGAAACTTTATACAAAATAGGCGTCGCTGGCGTTTCGTTTCTATaGCCACAACTTTTCTTGTCA +
Preference number: 5 (lower is better)
Translates to: LLDMAKTESETLYKIGVAGVSFL*PQLFLS
Trigger: TGACAAGAAAAGTTGTGGCAATAGAAACGAAACGCC...AGCGACGCCTATTTTGTATAAAGTTTCCGACTCCGTCTTGGCCATGTCTAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp GGATCTAGAAGTCAAAAGGACAATTTCTGGTACAAGAAACATAGACCTCACAGTCGCATATCTCGAGGGTaGCCTGCATTCTTCAAACAG +
Preference number: 5 (lower is better)
Translates to: GSRSQKDNFWYKKHRPHSRISRG*PAFFKQ
Trigger: CTGTTTGAAGAATGCAGGCAACCCTCGAGATATGCG...ACTGTGAGGTCTATGTTTCTTGTACCAGAAATTGTCCTTTTGACTTCTAGATCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp ACATTAGGGAAGAAGGATCTAGAAGTCAAAAGGACAATTTCTGGTACAAGAAACGATCACCCGGATGTCTaGGGATCACTTTCTGCAACC +
Preference number: 5 (lower is better)
Translates to: TLGKKDLEVKRTISGTRNDHPDV*GSLSAT
Trigger: GGTTGCAGAAAGTGATCCCAAGACATCCGGGTGATC...GTTTCTTGTACCAGAAATTGTCCTTTTGACTTCTAGATCCTTCTTCCCTAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp TTACTAGACATGGCCAAGACGGAGTCGGAAACTTTATACAAAATAGGCGTCGCTCTGTCAGTGTGCTTGTaGAAGGCAAGAGAATTCAAT +
Preference number: 5 (lower is better)
Translates to: LLDMAKTESETLYKIGVALSVCL*KAREFN
Trigger: ATTGAATTCTCTTGCCTTCAACAAGCACACTGACAG...AGCGACGCCTATTTTGTATAAAGTTTCCGACTCCGTCTTGGCCATGTCTAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp GACGGAGTCGGAAACTTTATACAAAATAGGCGTCGCTTTGTTTTCCTTATTCTTAAAACCAGCAGTGATTaGGGTCCCCCTGAAACCTCT +
Preference number: 5 (lower is better)
Translates to: DGVGNFIQNRRRFVFLILKTSSD*GPPETS
Trigger: AGAGGTTTCAGGGGGACCCAAATCACTGCTGGTTTT...AAGAATAAGGAAAACAAAGCGACGCCTATTTTGTATAAAGTTTCCGACTCCGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp TTTTCCAGTCTGATGGCTCATACCTCCTTGGCCCTCTTTTTATCACCACAAAAAGGCGTTTCGTTTCTATaGCCACAACTTTTCTTGTCA +
Preference number: 5 (lower is better)
Translates to: FSSLMAHTSLALFLSPQKGVSFL*PQLFLS
Trigger: TGACAAGAAAAGTTGTGGCAATAGAAACGAAACGCC...TTTTTGTGGTGATAAAAAGAGGGCCAAGGAGGTATGAGCCATCAGACTGGAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp ACATTAGGGAAGAAGGATCTAGAAGTCAAAAGGACAATTTCTGGTACAAGAAACCGCATATCTCGAGGGTaGCCTGCATTCTTCAAACAG +
Preference number: 5 (lower is better)
Translates to: TLGKKDLEVKRTISGTRNRISRG*PAFFKQ
Trigger: CTGTTTGAAGAATGCAGGCAACCCTCGAGATATGCG...GTTTCTTGTACCAGAAATTGTCCTTTTGACTTCTAGATCCTTCTTCCCTAATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp GGATCTAGAAGTCAAAAGGACAATTTCTGGTACAAGAAACATAGACCTCACAGTAGCCCGTCAAAGAAGTaGTCGCCAATTATGATGACG +
Preference number: 5 (lower is better)
Translates to: GSRSQKDNFWYKKHRPHSSPSKK*SPIMMT
Trigger: CGTCATCATAATTGGCGACAACTTCTTTGACGGGCT...ACTGTGAGGTCTATGTTTCTTGTACCAGAAATTGTCCTTTTGACTTCTAGATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp GACGGAGTCGGAAACTTTATACAAAATAGGCGTCGCTTTGTTTTCCTTATTCTTAAACACCTGACACTTTaGGTCTCACTGTGGGTTTGG +
Preference number: 5 (lower is better)
Translates to: DGVGNFIQNRRRFVFLILKHLTL*VSLWVW
Trigger: CCAAACCCACAGTGAGACCAAAAGTGTCAGGTGTTT...AAGAATAAGGAAAACAAAGCGACGCCTATTTTGTATAAAGTTTCCGACTCCGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS TCA 90 bp TTAGATGGAAATCAGAGCAGGCCACTGGAGTGGAAAATGTTTAATTaGACTATTTCATTACGCGGAAGTTTATGTCCCCCTCACAGAATC +
Preference number: 5 (lower is better)
Translates to: LDGNQSRPLEWKMFN*TISLRGSLCPPHRI
Trigger: GATTCTGTGAGGGGGACATAAACTTCCGCGTAATGAAATAGTTCAATTAAACATTTTCCACTCCAGTGGCCTGCTCTGATTTCCATCTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000682649.1
CDS-3UTR CAA 90 bp GGATCTAGAAGTCAAAAGGACAATTTCTGGTACAAGAAACATAGACCTCACAGTTCTGTTCTGACTCCGTaGCTGTACAATAACTGGAGT +
Preference number: 5 (lower is better)
Translates to: GSRSQKDNFWYKKHRPHSSVLTP*LYNNWS
Trigger: ACTCCAGTTATTGTACAGCAACGGAGTCAGAACAGA...ACTGTGAGGTCTATGTTTCTTGTACCAGAAATTGTCCTTTTGACTTCTAGATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp GGATCTAGAAGTCAAAAGGACAATTTCTGGTACAAGAAACATAGACCTCACAGTAGTTCCGAATACAACTaGCAGCCCGTCAAAGAAGTT +
Preference number: 5 (lower is better)
Translates to: GSRSQKDNFWYKKHRPHSSSEYN*QPVKEV
Trigger: AACTTCTTTGACGGGCTGCAAGTTGTATTCGGAACT...ACTGTGAGGTCTATGTTTCTTGTACCAGAAATTGTCCTTTTGACTTCTAGATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp ACATTAGGGAAGAAGGATCTAGAAGTCAAAAGGACAATTTCTGGTACAAGAAACATGGCTCATACCTCCTaGGCCCTCTTTTTATCACCA +
Preference number: 5 (lower is better)
Translates to: TLGKKDLEVKRTISGTRNMAHTS*ALFLSP
Trigger: TGGTGATAAAAAGAGGGCCAAGGAGGTATGAGCCAT...GTTTCTTGTACCAGAAATTGTCCTTTTGACTTCTAGATCCTTCTTCCCTAATGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp GACGGAGTCGGAAACTTTATACAAAATAGGCGTCGCTTTGTTTTCCTTATTCTTCAGTTTGCAAAATGTTaGCTGTGCCGTGTCTGCAAA +
Preference number: 5 (lower is better)
Translates to: DGVGNFIQNRRRFVFLILQFAKC*LCRVCK
Trigger: TTTGCAGACACGGCACAGCAAACATTTTGCAAACTG...AAGAATAAGGAAAACAAAGCGACGCCTATTTTGTATAAAGTTTCCGACTCCGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp ATACTGTTTCCATCAGCATGTCTTAATATACTAAACGTGTCCCCTGAAGTCCGTTTGTTGGTTTTCTCGTaGTTTGGCTCTTTCTCTTTC +
Preference number: 5 (lower is better)
Translates to: ILFPSACLNILNVSPEVRLLVFS*FGSFSF
Trigger: GAAAGAGAAAGAGCCAAACAACGAGAAAACCAACAA...ACGGACTTCAGGGGACACGTTTAGTATATTAAGACATGCTGATGGAAACAGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp GACGGAGTCGGAAACTTTATACAAAATAGGCGTCGCTTTGTTTTCCTTATTCTTAAAATAGGCGTCGCTTaGTTTTCCTTATTCTTCAGG +
Preference number: 5 (lower is better)
Translates to: DGVGNFIQNRRRFVFLILKIGVA*FSLFFR
Trigger: CCTGAAGAATAAGGAAAACAAAGCGACGCCTATTTT...AAGAATAAGGAAAACAAAGCGACGCCTATTTTGTATAAAGTTTCCGACTCCGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp GGATCTAGAAGTCAAAAGGACAATTTCTGGTACAAGAAACATAGACCTCACAGTAAAATAGGCGTCGCTTaGTTTTCCTTATTCTTCAGG +
Preference number: 5 (lower is better)
Translates to: GSRSQKDNFWYKKHRPHSKIGVA*FSLFFR
Trigger: CCTGAAGAATAAGGAAAACAAAGCGACGCCTATTTT...ACTGTGAGGTCTATGTTTCTTGTACCAGAAATTGTCCTTTTGACTTCTAGATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp ACATTAGGGAAGAAGGATCTAGAAGTCAAAAGGACAATTTCTGGTACAAGAAACCTGTCAGTGTGCTTGTaGAAGGCAAGAGAATTCAAT +
Preference number: 5 (lower is better)
Translates to: TLGKKDLEVKRTISGTRNLSVCL*KAREFN
Trigger: ATTGAATTCTCTTGCCTTCAACAAGCACACTGACAG...GTTTCTTGTACCAGAAATTGTCCTTTTGACTTCTAGATCCTTCTTCCCTAATGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS-3UTR CAA 90 bp ATAGGCGTCGCTTTGTTTTCCTTATTCTTCAGGACTGAGAAATGTGAAAATATGTTGTTGGTTTTCTCGTaGTTTGGCTCTTTCTCTTTC +
Preference number: 5 (lower is better)
Translates to: IGVALFSLFFRTEKCENMLLVFS*FGSFSF
Trigger: GAAAGAGAAAGAGCCAAACAACGAGAAAACCAACAA...CATATTTTCACATTTCTCAGTCCTGAAGAATAAGGAAAACAAAGCGACGCCTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS GCA 72 bp CATCCTAGCCAGGCGGCGTCCGCGGCTGCAGGACACTaGGGGATCGCCCGCTTCTGGCGCGGCCCGCCTGCT +
Preference number: 6 (lower is better)
Translates to: HPSQAASAAAGH*GIARFWRGPPA
Trigger: AGCAGGCGGGCCGCGCCAGAAGCGGGCGATCCCGCAGTGTCCTGCAGCCGCGGACGCCGCCTGGCTAGGATG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355311.10
ENST00000440978.2
CDS GCA 72 bp CATCCTAGCCAGGCGGCGTCCGCGGCTGCAGGACACTaGGGGATCGCCCGCTTCTGGCGCGGCCCGCCTGTG +
Preference number: 6 (lower is better)
Translates to: HPSQAASAAAGH*GIARFWRGPPV
Trigger: CACAGGCGGGCCGCGCCAGAAGCGGGCGATCCCGCAGTGTCCTGCAGCCGCGGACGCCGCCTGGCTAGGATG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000368648.8
CDS CCA 72 bp TCCGCGGCTGCAGGACACTGCGGGATCGCCCGCTTCTaGCGCGGCCCGCCTGTGCCGCTCACTCGACGGACA +
Preference number: 6 (lower is better)
Translates to: SAAAGHCGIARF*RGPPVPLTRRT
Trigger: TGTCCGTCGAGTGAGCGGCACAGGCGGGCCGCGCCAGAAGCGGGCGATCCCGCAGTGTCCTGCAGCCGCGGA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000368648.8
CDS GCA 72 bp CCGCCTGCTCCAAAGACAAATAAACGGGGCAGTGAGTaGTGCGGCGCAGTCCCGGGCGCAGGCGGGGCGCGG +
Preference number: 6 (lower is better)
Translates to: PPAPKTNKRGSE*CGAVPGAGGAR
Trigger: CCGCGCCCCGCCTGCGCCCGGGACTGCGCCGCAGCACTCACTGCCCCGTTTATTTGTCTTTGGAGCAGGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355311.10
ENST00000440978.2
CDS CAA 90 bp GGAGCAGGACGCGGTGGCCGCGGCGGCGCTTGTTGTTGTTGTTGTTaGCAGGCGCGCTCAACGTGGTGTCATCCTAGCCAGGCGGCGTCC +
Preference number: 6 (lower is better)
Translates to: GAGRGGRGGACCCCC*QARSTWCHPSQAAS
Trigger: GGACGCCGCCTGGCTAGGATGACACCACGTTGAGCGCGCCTGCAAACAACAACAACAACAAGCGCCGCCGCGGCCACCGCGTCCTGCTCC
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS CAA 90 bp GCGGCGGCGCTTCGAAGGAGCAGGACGCGGTGGCCGCGGCGGCGCTaGTTGTTGTTGTTGTTTGCAGGCGCGCTCAACGTGGTGTCATCC +
Preference number: 6 (lower is better)
Translates to: AAALRRSRTRWPRRR*LLLLFAGALNVVSS
Trigger: GGATGACACCACGTTGAGCGCGCCTGCAAACAACAACAACAACAAGCGCCGCCGCGGCCACCGCGTCCTGCTCCTTCGAAGCGCCGCCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS TCA 72 bp AGCCGTCTACGCCTTCTCTCACCCTTCGCCCACCTCTaGAGCTGGTCAGGTGCGGGCCCGGGCAGCTCCTCA +
Preference number: 6 (lower is better)
Translates to: SRLRLLSPFAHL*SWSGAGPGSSS
Trigger: TGAGGAGCTGCCCGGGCCCGCACCTGACCAGCTTCAGAGGTGGGCGAAGGGTGAGAGAAGGCGTAGACGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682649.1
CDS CCA 72 bp TCCGCGGCTGCAGGACACTGCGGGATCGCCCGCTTCTaGCGCGGCCCGCCTGCTCCAAAGACAAATAAACGG +
Preference number: 6 (lower is better)
Translates to: SAAAGHCGIARF*RGPPAPKTNKR
Trigger: CCGTTTATTTGTCTTTGGAGCAGGCGGGCCGCGCCAGAAGCGGGCGATCCCGCAGTGTCCTGCAGCCGCGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355311.10
ENST00000440978.2
CDS GCA 72 bp GCGGTGGCCGCGGCGGCGCTTGTTGTTGTTGTTGTTTaGAGGCGCGCTCAACGTGGTGTCATCCTAGCCAGG +
Preference number: 6 (lower is better)
Translates to: AVAAAALVVVVV*RRAQRGVILAR
Trigger: CCTGGCTAGGATGACACCACGTTGAGCGCGCCTGCAAACAACAACAACAACAAGCGCCGCCGCGGCCACCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS GCA 72 bp CAGGGTTGTTGCCCAGGGTGGGGATCTGGTTGTGATTaGGGGGAACGCTGTACAGCGCCTCGGCGATGTCCG +
Preference number: 6 (lower is better)
Translates to: QGCCPGWGSGCD*GERCTAPRRCP
Trigger: CGGACATCGCCGAGGCGCTGTACAGCGTTCCCCGCAATCACAACCAGATCCCCACCCTGGGCAACAACCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
ENST00000675373.1
CDS CAA 72 bp CGCGGTGGCCGCGGCGGCGCTTGTTGTTGTTGTTGTTaGCAGGCGCGCTCAACGTGGTGTCATCCTAGCCAG +
Preference number: 6 (lower is better)
Translates to: RGGRGGACCCCC*QARSTWCHPSQ
Trigger: CTGGCTAGGATGACACCACGTTGAGCGCGCCTGCAAACAACAACAACAACAAGCGCCGCCGCGGCCACCGCG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS CAA 72 bp AGCAGGACGCGGTGGCCGCGGCGGCGCTTGTTGTTGTaGTTGTTTGCAGGCGCGCTCAACGTGGTGTCATCC +
Preference number: 6 (lower is better)
Translates to: SRTRWPRRRLLL*LFAGALNVVSS
Trigger: GGATGACACCACGTTGAGCGCGCCTGCAAACAACAACAACAACAAGCGCCGCCGCGGCCACCGCGTCCTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS CAA 72 bp AGGAGCAGGACGCGGTGGCCGCGGCGGCGCTTGTTGTaGTTGTTGTTTGCAGGCGCGCTCAACGTGGTGTCA +
Preference number: 6 (lower is better)
Translates to: RSRTRWPRRRLL*LLFAGALNVVS
Trigger: TGACACCACGTTGAGCGCGCCTGCAAACAACAACAACAACAAGCGCCGCCGCGGCCACCGCGTCCTGCTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS CCA 72 bp CGCCAGGAATGTGCCTCGGCGGGGTCTGGACTCGGATaGCATGGGGAGTTATCAGCTCGCTCCACACCAACA +
Preference number: 6 (lower is better)
Translates to: RQECASAGSGLG*HGELSARSTPT
Trigger: TGTTGGTGTGGAGCGAGCTGATAACTCCCCATGCCATCCGAGTCCAGACCCCGCCGAGGCACATTCCTGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
ENST00000675373.1
ENST00000682649.1
CDS GCA 72 bp GAGTACTGCTGGGGACGTAGCCTCGCGGGGACACGCTaGTTGTATTGCGACTGTAGCCGACTTGGTCGTTGG +
Preference number: 6 (lower is better)
Translates to: EYCWGRSLAGTR*LYCDCSRLGRW
Trigger: CCAACGACCAAGTCGGCTACAGTCGCAATACAAGCAGCGTGTCCCCGCGAGGCTACGTCCCCAGCAGTACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
ENST00000675373.1
CDS CCA 72 bp GCTTGTTGTTGTTGTTGTTTGCAGGCGCGCTCAACGTaGTGTCATCCTAGCCAGGCGGCGTCCGCGGCTGCA +
Preference number: 6 (lower is better)
Translates to: ACCCCCLQARST*CHPSQAASAAA
Trigger: TGCAGCCGCGGACGCCGCCTGGCTAGGATGACACCACGTTGAGCGCGCCTGCAAACAACAACAACAACAAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
CDS CCA 72 bp CCTGAGGGCCACCCAGCCTCAAACCCAGTGCTTCCATaGGCCTGCCAAGGCATGTGGTCTGTCTATGGGATG +
Preference number: 6 (lower is better)
Translates to: PEGHPASNPVLP*ACQGMWSVYGM
Trigger: CATCCCATAGACAGACCACATGCCTTGGCAGGCCCATGGAAGCACTGGGTTTGAGGCTGGGTGGCCCTCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682649.1
CDS CAA 72 bp TACTGCTGGGGACGTAGCCTCGCGGGGACACGCTGCTaGTATTGCGACTGTAGCCGACTTGGTCGTTGGCTT +
Preference number: 6 (lower is better)
Translates to: YCWGRSLAGTRC*YCDCSRLGRWL
Trigger: AAGCCAACGACCAAGTCGGCTACAGTCGCAATACAAGCAGCGTGTCCCCGCGAGGCTACGTCCCCAGCAGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
ENST00000675373.1
CDS CCA 72 bp CATGGGCCTGCCAAGGCATGTGGTCTGTCTATGGGATaGCGGGACCCAGTCACTAATCCTGCACACAAAGCC +
Preference number: 6 (lower is better)
Translates to: HGPAKACGLSMG*RDPVTNPAHKA
Trigger: GGCTTTGTGTGCAGGATTAGTGACTGGGTCCCGCCATCCCATAGACAGACCACATGCCTTGGCAGGCCCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682649.1
CDS CCA 72 bp GCTTCCATGGGCCTGCCAAGGCATGTGGTCTGTCTATaGGATGGCGGGACCCAGTCACTAATCCTGCACACA +
Preference number: 6 (lower is better)
Translates to: ASMGLPRHVVCL*DGGTQSLILHT
Trigger: TGTGTGCAGGATTAGTGACTGGGTCCCGCCATCCCATAGACAGACCACATGCCTTGGCAGGCCCATGGAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682649.1
CDS CCA 72 bp TGGGTGCTGCGGAAGGTAAACAGAAGTCCCTCACATTaGCGGGACTACCAGCCCAGACATAGCTTGCAGTCC +
Preference number: 6 (lower is better)
Translates to: WVLRKVNRSPSH*RDYQPRHSLQS
Trigger: GGACTGCAAGCTATGTCTGGGCTGGTAGTCCCGCCAATGTGAGGGACTTCTGTTTACCTTCCGCAGCACCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355311.10
ENST00000368648.8
CDS CCA 72 bp CTAATCCTGCACACAAAGCCAGCCCTAGATGGAGGCTaGCAGCAAAGCCCTCTGGGTAAGGATGTTGCAGGC +
Preference number: 6 (lower is better)
Translates to: LILHTKPALDGG*QQSPLGKDVAG
Trigger: GCCTGCAACATCCTTACCCAGAGGGCTTTGCTGCCAGCCTCCATCTAGGGCTGGCTTTGTGTGCAGGATTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682649.1
CDS CAA 72 bp ATGGAGGCTGGCAGCAAAGCCCTCTGGGTAAGGATGTaGCAGGCCTCGATTCTTCCCGGGGAAACACTCGTT +
Preference number: 6 (lower is better)
Translates to: MEAGSKALWVRM*QASILPGETLV
Trigger: AACGAGTGTTTCCCCGGGAAGAATCGAGGCCTGCAACATCCTTACCCAGAGGGCTTTGCTGCCAGCCTCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682649.1
CDS CAA 90 bp CGGGGTGACGCCGAGGAGGGGGCAGCACTCCTCGGCAAAGCCTTATaGAGACACACGCTTTACATCTGCGGAATCTCATCTCTCATTTCT +
Preference number: 6 (lower is better)
Translates to: RGDAEEGAALLGKAL*RHTLYICGISSLIS
Trigger: AGAAATGAGAGATGAGATTCCGCAGATGTAAAGCGTGTGTCTCAATAAGGCTTTGCCGAGGAGTGCTGCCCCCTCCTCGGCGTCACCCCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000682649.1
CDS TCA 72 bp CCGAGGAGGGGGCAGCACTCCTCGGCAAAGCCTTATTaGGACACACGCTTTACATCTGCGGAATCTCATCTC +
Preference number: 6 (lower is better)
Translates to: PRRGQHSSAKPY*DTRFTSAESHL
Trigger: GAGATGAGATTCCGCAGATGTAAAGCGTGTGTCTCAATAAGGCTTTGCCGAGGAGTGCTGCCCCCTCCTCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000682649.1
CDS CAA 72 bp GCCGAGGAGGGGGCAGCACTCCTCGGCAAAGCCTTATaGAGACACACGCTTTACATCTGCGGAATCTCATCT +
Preference number: 6 (lower is better)
Translates to: AEEGAALLGKAL*RHTLYICGISS
Trigger: AGATGAGATTCCGCAGATGTAAAGCGTGTGTCTCAATAAGGCTTTGCCGAGGAGTGCTGCCCCCTCCTCGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000682649.1
CDS CCA 72 bp TGGGTGCTGCGGAAGGTAAACAGAAGTCCCTCACATTaGCGGGACTACCAGCCCAGACATAGCTTTCCAGTT +
Preference number: 6 (lower is better)
Translates to: WVLRKVNRSPSH*RDYQPRHSFPV
Trigger: AACTGGAAAGCTATGTCTGGGCTGGTAGTCCCGCCAATGTGAGGGACTTCTGTTTACCTTCCGCAGCACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000440978.2
ENST00000675373.1
CDS CAA 72 bp AGTGAAATATGCCACCGACTTCACAAAAGGGCCAGTTaGTCTTCTCCGCGGCTACGTCCTCAGCACCCAGCA +
Preference number: 6 (lower is better)
Translates to: SEICHRLHKRAS*SSPRLRPQHPA
Trigger: TGCTGGGTGCTGAGGACGTAGCCGCGGAGAAGACAAACTGGCCCTTTTGTGAAGTCGGTGGCATATTTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000440978.2
ENST00000675373.1
CDS CAA 90 bp GTTCATCAAAGTGAAATATGCCACCGACTTCACAAAAGGGCCAGTTaGTCTTCTCCGCGGCTACGTCCTCAGCACCCAGCAGAGAGCCTG +
Preference number: 6 (lower is better)
Translates to: VHQSEICHRLHKRAS*SSPRLRPQHPAESL
Trigger: CAGGCTCTCTGCTGGGTGCTGAGGACGTAGCCGCGGAGAAGACAAACTGGCCCTTTTGTGAAGTCGGTGGCATATTTCACTTTGATGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000675373.1
CDS CAA 90 bp GTTCATCAAAGTGAAATATGCCACCGACTTCACAAAAGGGCCAGTTaGTCTTCTCCGCGGCTACGTCCTCAGCACCCAGCAGAGAGCCTT +
Preference number: 6 (lower is better)
Translates to: VHQSEICHRLHKRAS*SSPRLRPQHPAESL
Trigger: AAGGCTCTCTGCTGGGTGCTGAGGACGTAGCCGCGGAGAAGACAAACTGGCCCTTTTGTGAAGTCGGTGGCATATTTCACTTTGATGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000440978.2
CDS CAA 90 bp ACACCTGTCGGCCCTTGGGTAACCTTTCGGGATCACCCGGATGTCTaGGGATCACTTTCTGCAACCTCTGAAAGCCGTAATCTATGGTTG +
Preference number: 6 (lower is better)
Translates to: TPVGPWVTFRDHPDV*GSLSATSESRNLWL
Trigger: CAACCATAGATTACGGCTTTCAGAGGTTGCAGAAAGTGATCCCAAGACATCCGGGTGATCCCGAAAGGTTACCCAAGGGCCGACAGGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682649.1
CDS CCA 72 bp CACTTTCTGCAACCTCTGAAAGCCGTAATCTATGGTTaGTTCATTAAGGGCGGTGTAGACAAAGCGCCCAGG +
Preference number: 6 (lower is better)
Translates to: HFLQPLKAVIYG*FIKGGVDKAPR
Trigger: CCTGGGCGCTTTGTCTACACCGCCCTTAATGAACCAACCATAGATTACGGCTTTCAGAGGTTGCAGAAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
ENST00000675373.1
ENST00000682649.1
CDS CAA 90 bp TCAGTAACACCTCCTTGGGTAACCTTTCGGGATCACCCGGATGTCTaGGGATCACTTTCTGCAACCTCTGAAAGCCGTAATCTATGGTTG +
Preference number: 6 (lower is better)
Translates to: SVTPPWVTFRDHPDV*GSLSATSESRNLWL
Trigger: CAACCATAGATTACGGCTTTCAGAGGTTGCAGAAAGTGATCCCAAGACATCCGGGTGATCCCGAAAGGTTACCCAAGGAGGTGTTACTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355311.10
ENST00000368648.8
ENST00000440978.2
ENST00000675373.1
CDS CCA 72 bp ACCCACTCTGACCCTTGTAAAGCAGCCTCAGATGGCTaGCTTAACCATGATGAATCGCTTGGCAGTTTAATT +
Preference number: 6 (lower is better)
Translates to: THSDPCKAASDG*LNHDESLGSLI
Trigger: AATTAAACTGCCAAGCGATTCATCATGGTTAAGCCAGCCATCTGAGGCTGCTTTACAAGGGTCAGAGTGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682649.1
CDS CAA 90 bp AGCAACACTATTCGCGTGCATCCAAAACAATGTGTGTGCAATGTATaGGCTTTCTGTCGCCCCACAATTACCCATCAAACCACGTGCATT +
Preference number: 6 (lower is better)
Translates to: SNTIRVHPKQCVCNV*AFCRPTITHQTTCI
Trigger: AATGCACGTGGTTTGATGGGTAATTGTGGGGCGACAGAAAGCCAATACATTGCACACACATTGTTTTGGATGCACGCGAATAGTGTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682649.1
CDS GCA 72 bp AGCAACACTATTCGCGTGCATCCAAAACAATGTGTGTaGAATGTATTGGCTTTCTGTCGCCCCACAATTACC +
Preference number: 6 (lower is better)
Translates to: SNTIRVHPKQCV*NVLAFCRPTIT
Trigger: GGTAATTGTGGGGCGACAGAAAGCCAATACATTGCACACACATTGTTTTGGATGCACGCGAATAGTGTTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682649.1
CDS CCA 72 bp AAAGGAAAACAAGAGTCAAGTAATCACAGATCAGACTaGGGCTGCTTAGATGGAAATCAGAGCAGGCCACTG +
Preference number: 6 (lower is better)
Translates to: KGKQESSNHRSD*GCLDGNQSRPL
Trigger: CAGTGGCCTGCTCTGATTTCCATCTAAGCAGCCCCAGTCTGATCTGTGATTACTTGACTCTTGTTTTCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682649.1
CDS TCA 72 bp TTCTTTGCTTCCCTTAAAAAGATGGTCCTTTGGAGATaGGATGTAAAACTCGAGCCGTCTACGCCTTCTCTC +
Preference number: 6 (lower is better)
Translates to: FFASLKKMVLWR*DVKLEPSTPSL
Trigger: GAGAGAAGGCGTAGACGGCTCGAGTTTTACATCTCATCTCCAAAGGACCATCTTTTTAAGGGAAGCAAAGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000682649.1
CDS TCA 72 bp AATCAGAGCAGGCCACTGGAGTGGAAAATGTTTAATTaGACTATTTCATTACGCGGAAGTTTATGTCCCCCT +
Preference number: 6 (lower is better)
Translates to: NQSRPLEWKMFN*TISLRGSLCPP
Trigger: AGGGGGACATAAACTTCCGCGTAATGAAATAGTTCAATTAAACATTTTCCACTCCAGTGGCCTGCTCTGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000682649.1
CDS TCA 72 bp TCTTCCCCAGCCCTGATGATCCTAACAGTGAATATCTaGCATCCGTTGCTAGCATGTTCACAAATTAAAAAG +
Preference number: 6 (lower is better)
Translates to: SSPALMILTVNI*HPLLACSQIKK
Trigger: CTTTTTAATTTGTGAACATGCTAGCAACGGATGTCAGATATTCACTGTTAGGATCATCAGGGCTGGGGAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000682649.1
CDS TCA 72 bp CTGCTAGATTTCATCTCGTTCAGTGATCGTTTTATGTaGAGCCTGAACAATACGTTTTCACCTGAATTAAAA +
Preference number: 6 (lower is better)
Translates to: LLDFISFSDRFM*SLNNTFSPELK
Trigger: TTTTAATTCAGGTGAAAACGTATTGTTCAGGCTTCACATAAAACGATCACTGAACGAGATGAAATCTAGCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682649.1
CDS TCA 72 bp TTGTTTATTGAAACTGCTAGATTTCATCTCGTTCAGTaGTCGTTTTATGTGAAGCCTGAACAATACGTTTTC +
Preference number: 6 (lower is better)
Translates to: LFIETARFHLVQ*SFYVKPEQYVF
Trigger: GAAAACGTATTGTTCAGGCTTCACATAAAACGATCACTGAACGAGATGAAATCTAGCAGTTTCAATAAACAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682649.1