RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EBF2 (Homo sapiens)

Ensembl gene IDs: ENSG00000221818

Ensembl transcript IDs: ENST00000408929.7, ENST00000517825.1, ENST00000520164.6, ENST00000535548.1

Found 313 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCAAACCGTGTTGCTGAAGTTCTATGGGGCTGTGTACCTCTGTACTaGACCAGGCACCCAAAGCGGAGGGAGTGGTGGGGTTCTGGTGAG +
Preference number: 1 (lower is better)
Translates to: PNRVAEVLWGCVPLY*TRHPKRREWWGSGE
Trigger: CTCACCAGAACCCCACCACTCCCTCCGCTTTGGGTGCCTGGTTCAGTACAGAGGTACACAGCCCCATAGAACTTCAGCAACACGGTTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520164.6
3UTR CCA 90 bp AGCCACCATCAGAGCTATAGGAGGACGTGGGACCAAGTAAGATGCTaGCTCCTTGCAGACCCAAGGGTGTCCATCATGTTCATGTGGGGG +
Preference number: 1 (lower is better)
Translates to: SHHQSYRRTWDQVRC*LLADPRVSIMFMWG
Trigger: CCCCCACATGAACATGATGGACACCCTTGGGTCTGCAAGGAGCCAGCATCTTACTTGGTCCCACGTCCTCCTATAGCTCTGATGGTGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
3UTR CCA 90 bp AAGAGGGTCAGTTTGTGTAGCCACCATCAGAGCTATAGGAGGACGTaGGACCAAGTAAGATGCTGGCTCCTTGCAGACCCAAGGGTGTCC +
Preference number: 1 (lower is better)
Translates to: KRVSLCSHHQSYRRT*DQVRCWLLADPRVS
Trigger: GGACACCCTTGGGTCTGCAAGGAGCCAGCATCTTACTTGGTCCCACGTCCTCCTATAGCTCTGATGGTGGCTACACAAACTGACCCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
3UTR GCA 90 bp TGTAGCCACCATCAGAGCTATAGGAGGACGTGGGACCAAGTAAGATaGTGGCTCCTTGCAGACCCAAGGGTGTCCATCATGTTCATGTGG +
Preference number: 1 (lower is better)
Translates to: CSHHQSYRRTWDQVR*WLLADPRVSIMFMW
Trigger: CCACATGAACATGATGGACACCCTTGGGTCTGCAAGGAGCCAGCATCTTACTTGGTCCCACGTCCTCCTATAGCTCTGATGGTGGCTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
3UTR TCA 90 bp GTTTTGGCTCTGCTAGAAGGTGAGGTGCTTCTTTCCTTGGGATGCTaGAAGCCTGAGACAGACTCAAACATGGGAATTCTCTGGACTGCT +
Preference number: 1 (lower is better)
Translates to: VLALLEGEVLLSLGC*KPETDSNMGILWTA
Trigger: AGCAGTCCAGAGAATTCCCATGTTTGAGTCTGTCTCAGGCTTTCAGCATCCCAAGGAAAGAAGCACCTCACCTTCTAGCAGAGCCAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520164.6
3UTR TCA 90 bp CTAAAGAGTCCATCAAACAGAGTTATCTTCTCCAAACCGTGTTGCTaGAGTTCTATGGGGCTGTGTACCTCTGTACTGAACCAGGCACCC +
Preference number: 1 (lower is better)
Translates to: LKSPSNRVIFSKPCC*SSMGLCTSVLNQAP
Trigger: GGGTGCCTGGTTCAGTACAGAGGTACACAGCCCCATAGAACTTCAGCAACACGGTTTGGAGAAGATAACTCTGTTTGATGGACTCTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520164.6
3UTR TCA 90 bp CAAGAGTGTGGACTATTTAGAAATCAGACGGAGCTGGGAATGAATTaGTGGGTTGGAGTATTTGTGCATGTGCTAGAGTGTCTGTTTCTG +
Preference number: 1 (lower is better)
Translates to: QECGLFRNQTELGMN*WVGVFVHVLECLFL
Trigger: CAGAAACAGACACTCTAGCACATGCACAAATACTCCAACCCATCAATTCATTCCCAGCTCCGTCTGATTTCTAAATAGTCCACACTCTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520164.6
3UTR CCA 90 bp AGACTCTATTGTGGTGCTCATGAGTCAATAAGGAGAACCCCAACGTaGAAACAAGTGACATCTTTATTGGCAATCCCAATATGCCTGGAT +
Preference number: 1 (lower is better)
Translates to: RLYCGAHESIRRTPT*KQVTSLLAIPICLD
Trigger: ATCCAGGCATATTGGGATTGCCAATAAAGATGTCACTTGTTTCCACGTTGGGGTTCTCCTTATTGACTCATGAGCACCACAATAGAGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520164.6
3UTR TCA 90 bp GGATTAGGGCTTTTAATATCCCTCTCCCACATTCCGTCTCATTCTTaGCTAGAAACTGTCGAGTGGCATAGCTATGTTTTTCAAGAGAGT +
Preference number: 1 (lower is better)
Translates to: GLGLLISLSHIPSHS*LETVEWHSYVFQES
Trigger: ACTCTCTTGAAAAACATAGCTATGCCACTCGACAGTTTCTAGTCAAGAATGAGACGGAATGTGGGAGAGGGATATTAAAAGCCCTAATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520164.6
3UTR GCA 90 bp ACCCCAACGTGGAAACAAGTGACATCTTTATTGGCAATCCCAATATaGCTGGATATGTCTCTAGGATTACATAAGCTTTCAAGAATCAAC +
Preference number: 1 (lower is better)
Translates to: TPTWKQVTSLLAIPI*LDMSLGLHKLSRIN
Trigger: GTTGATTCTTGAAAGCTTATGTAATCCTAGAGACATATCCAGGCATATTGGGATTGCCAATAAAGATGTCACTTGTTTCCACGTTGGGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520164.6
3UTR-3UTR CCA 90 bp CCCAAGAGGGTCAGTTTGTGTAGCCACCATCAGAGCTATAGGAGGACGTGGGACTCCATCATGTTCATGTaGGGGCACCACTACACCCCC +
Preference number: 2 (lower is better)
Translates to: PKRVSLCSHHQSYRRTWDSIMFM*GHHYTP
Trigger: GGGGGTGTAGTGGTGCCCCCACATGAACATGATGGA...GTCCCACGTCCTCCTATAGCTCTGATGGTGGCTACACAAACTGACCCTCTTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
3UTR-3UTR TCA 90 bp AGTCCGGTCATGGCTCTGAATCCATTTCCATTGCCGCTGGAGCAGGCAGGTGAATGGGACTTGATGACATaGACAGGCCACACATGCTCT +
Preference number: 2 (lower is better)
Translates to: SPVMALNPFPLPLEQAGEWDLMT*TGHTCS
Trigger: AGAGCATGTGTGGCCTGTTCATGTCATCAAGTCCCA...TTCACCTGCCTGCTCCAGCGGCAATGGAAATGGATTCAGAGCCATGACCGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535548.1
3UTR-3UTR GCA 90 bp GTCCTTGTCCCAAGAGGGTCAGTTTGTGTAGCCACCATCAGAGCTATAGGAGGATGGGACCAAGTAAGATaGTGGCTCCTTGCAGACCCA +
Preference number: 2 (lower is better)
Translates to: VLVPRGSVCVATIRAIGGWDQVR*WLLADP
Trigger: TGGGTCTGCAAGGAGCCAGCATCTTACTTGGTCCCA...TCCTCCTATAGCTCTGATGGTGGCTACACAAACTGACCCTCTTGGGACAAGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
3UTR-3UTR CCA 90 bp AGGCAAGGTTCTTCCCCTCTAAGAGCTAGTCACAAAACGATGAAGAGCCCATCAGACCAAGTAAGATGCTaGCTCCTTGCAGACCCAAGG +
Preference number: 2 (lower is better)
Translates to: RQGSSPLRASHKTMKSPSDQVRC*LLADPR
Trigger: CCTTGGGTCTGCAAGGAGCCAGCATCTTACTTGGTC...TGATGGGCTCTTCATCGTTTTGTGACTAGCTCTTAGAGGGGAAGAACCTTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520164.6
3UTR CAA 90 bp GACTACGTCAATGACATCTTTTGTCCTTGTCCCAAGAGGGTCAGTTaGTGTAGCCACCATCAGAGCTATAGGAGGACGTGGGACCAAGTA +
Preference number: 2 (lower is better)
Translates to: DYVNDIFCPCPKRVS*CSHHQSYRRTWDQV
Trigger: TACTTGGTCCCACGTCCTCCTATAGCTCTGATGGTGGCTACACAAACTGACCCTCTTGGGACAAGGACAAAAGATGTCATTGACGTAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
3UTR CAA 90 bp GACTCTAAAGAGTCCATCAAACAGAGTTATCTTCTCCAAACCGTGTaGCTGAAGTTCTATGGGGCTGTGTACCTCTGTACTGAACCAGGC +
Preference number: 2 (lower is better)
Translates to: DSKESIKQSYLLQTV*LKFYGAVYLCTEPG
Trigger: GCCTGGTTCAGTACAGAGGTACACAGCCCCATAGAACTTCAGCAACACGGTTTGGAGAAGATAACTCTGTTTGATGGACTCTTTAGAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520164.6
3UTR-3UTR GCA 90 bp GCTCTGCCTTCACTTTTGGAAGGTAACATTCATATTCCACACATTCTTCCCCTTGGGAATTCTCTGGACTaGTCAGGGGAGAACGTTGAA +
Preference number: 2 (lower is better)
Translates to: ALPSLLEGNIHIPHILPLGNSLD*SGENVE
Trigger: TTCAACGTTCTCCCCTGAGCAGTCCAGAGAATTCCC...AAGGGGAAGAATGTGTGGAATATGAATGTTACCTTCCAAAAGTGAAGGCAGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000520164.6
3UTR-3UTR TCA 90 bp GCTCTGCCTTCACTTTTGGAAGGTAACATTCATATTCCACACATTCTTCCCCTTAGACGGAGCTGGGAATaGATTGATGGGTTGGAGTAT +
Preference number: 2 (lower is better)
Translates to: ALPSLLEGNIHIPHILPLRRSWE*IDGLEY
Trigger: ATACTCCAACCCATCAATTCATTCCCAGCTCCGTCT...AAGGGGAAGAATGTGTGGAATATGAATGTTACCTTCCAAAAGTGAAGGCAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520164.6
3UTR-3UTR TCA 90 bp GACAGGGAGAGGAAAGGACTTGGATGTTCTAAGACTGACTCTAAAGAGTCCATCCTCAGGGGAGAACGTTaGAAGCTAATAATAGGAATT +
Preference number: 2 (lower is better)
Translates to: DRERKGLGCSKTDSKESILRGER*KLIIGI
Trigger: AATTCCTATTATTAGCTTTCAACGTTCTCCCCTGAG...GATGGACTCTTTAGAGTCAGTCTTAGAACATCCAAGTCCTTTCCTCTCCCTGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520164.6
3UTR-3UTR CCA 90 bp TATCTTCTCCAAACCGTGTTGCTGAAGTTCTATGGGGCTGTGTACCTCTGTACTAATGAATTGATGGGTTaGAGTATTTGTGCATGTGCT +
Preference number: 2 (lower is better)
Translates to: YLLQTVLLKFYGAVYLCTNELMG*SICACA
Trigger: AGCACATGCACAAATACTCCAACCCATCAATTCATT...AGTACAGAGGTACACAGCCCCATAGAACTTCAGCAACACGGTTTGGAGAAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520164.6
3UTR CAA 90 bp GAGTCAATAAGGAGAACCCCAACGTGGAAACAAGTGACATCTTTATaGGCAATCCCAATATGCCTGGATATGTCTCTAGGATTACATAAG +
Preference number: 2 (lower is better)
Translates to: ESIRRTPTWKQVTSL*AIPICLDMSLGLHK
Trigger: CTTATGTAATCCTAGAGACATATCCAGGCATATTGGGATTGCCAATAAAGATGTCACTTGTTTCCACGTTGGGGTTCTCCTTATTGACTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520164.6
3UTR TCA 72 bp GTTGCTGAAGTTCTATGGGGCTGTGTACCTCTGTACTaGACCAGGCACCCAAAGCGGAGGGAGTGGTGGGGT +
Preference number: 3 (lower is better)
Translates to: VAEVLWGCVPLY*TRHPKRREWWG
Trigger: ACCCCACCACTCCCTCCGCTTTGGGTGCCTGGTTCAGTACAGAGGTACACAGCCCCATAGAACTTCAGCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520164.6
3UTR GCA 72 bp CATCAGAGCTATAGGAGGACGTGGGACCAAGTAAGATaGTGGCTCCTTGCAGACCCAAGGGTGTCCATCATG +
Preference number: 3 (lower is better)
Translates to: HQSYRRTWDQVR*WLLADPRVSIM
Trigger: CATGATGGACACCCTTGGGTCTGCAAGGAGCCAGCATCTTACTTGGTCCCACGTCCTCCTATAGCTCTGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
3UTR CCA 72 bp CAGAGCTATAGGAGGACGTGGGACCAAGTAAGATGCTaGCTCCTTGCAGACCCAAGGGTGTCCATCATGTTC +
Preference number: 3 (lower is better)
Translates to: QSYRRTWDQVRC*LLADPRVSIMF
Trigger: GAACATGATGGACACCCTTGGGTCTGCAAGGAGCCAGCATCTTACTTGGTCCCACGTCCTCCTATAGCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
3UTR CCA 72 bp AGTTTGTGTAGCCACCATCAGAGCTATAGGAGGACGTaGGACCAAGTAAGATGCTGGCTCCTTGCAGACCCA +
Preference number: 3 (lower is better)
Translates to: SLCSHHQSYRRT*DQVRCWLLADP
Trigger: TGGGTCTGCAAGGAGCCAGCATCTTACTTGGTCCCACGTCCTCCTATAGCTCTGATGGTGGCTACACAAACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
3UTR-3UTR CAA 90 bp TATCTTCTCCAAACCGTGTTGCTGAAGTTCTATGGGGCTGTGTACCTCTGTACTCCCAAGAGGGTCAGTTaGTGTAGCCACCATCAGAGC +
Preference number: 3 (lower is better)
Translates to: YLLQTVLLKFYGAVYLCTPKRVS*CSHHQS
Trigger: GCTCTGATGGTGGCTACACAAACTGACCCTCTTGGG...AGTACAGAGGTACACAGCCCCATAGAACTTCAGCAACACGGTTTGGAGAAGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520164.6
3UTR TCA 72 bp CTGCTAGAAGGTGAGGTGCTTCTTTCCTTGGGATGCTaGAAGCCTGAGACAGACTCAAACATGGGAATTCTC +
Preference number: 3 (lower is better)
Translates to: LLEGEVLLSLGC*KPETDSNMGIL
Trigger: GAGAATTCCCATGTTTGAGTCTGTCTCAGGCTTTCAGCATCCCAAGGAAAGAAGCACCTCACCTTCTAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520164.6
3UTR-3UTR CAA 90 bp AGGCAAGGTTCTTCCCCTCTAAGAGCTAGTCACAAAACGATGAAGAGCCCATCAGGAGCTGGGAATGAATaGATGGGTTGGAGTATTTGT +
Preference number: 3 (lower is better)
Translates to: RQGSSPLRASHKTMKSPSGAGNE*MGWSIC
Trigger: ACAAATACTCCAACCCATCAATTCATTCCCAGCTCC...TGATGGGCTCTTCATCGTTTTGTGACTAGCTCTTAGAGGGGAAGAACCTTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520164.6
3UTR-3UTR CAA 90 bp AGACTGACTCTAAAGAGTCCATCAAACAGAGTTATCTTCTCCAAACCGTGTTGCAGAAAGTCTGTGGTTTaGGCTCTGCTAGAAGGTGAG +
Preference number: 3 (lower is better)
Translates to: RLTLKSPSNRVIFSKPCCRKSVV*ALLEGE
Trigger: CTCACCTTCTAGCAGAGCCAAAACCACAGACTTTCT...GCAACACGGTTTGGAGAAGATAACTCTGTTTGATGGACTCTTTAGAGTCAGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520164.6
3UTR TCA 72 bp GGACTATTTAGAAATCAGACGGAGCTGGGAATGAATTaGTGGGTTGGAGTATTTGTGCATGTGCTAGAGTGT +
Preference number: 3 (lower is better)
Translates to: GLFRNQTELGMN*WVGVFVHVLEC
Trigger: ACACTCTAGCACATGCACAAATACTCCAACCCATCAATTCATTCCCAGCTCCGTCTGATTTCTAAATAGTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520164.6
3UTR CCA 72 bp TGTGGTGCTCATGAGTCAATAAGGAGAACCCCAACGTaGAAACAAGTGACATCTTTATTGGCAATCCCAATA +
Preference number: 3 (lower is better)
Translates to: CGAHESIRRTPT*KQVTSLLAIPI
Trigger: TATTGGGATTGCCAATAAAGATGTCACTTGTTTCCACGTTGGGGTTCTCCTTATTGACTCATGAGCACCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520164.6
3UTR TCA 72 bp CTTTTAATATCCCTCTCCCACATTCCGTCTCATTCTTaGCTAGAAACTGTCGAGTGGCATAGCTATGTTTTT +
Preference number: 3 (lower is better)
Translates to: LLISLSHIPSHS*LETVEWHSYVF
Trigger: AAAAACATAGCTATGCCACTCGACAGTTTCTAGTCAAGAATGAGACGGAATGTGGGAGAGGGATATTAAAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520164.6
3UTR CCA 72 bp TTAAATAGCTCTGTTGCTGCCAGGGTTCTAGCTGAATaGTCAAGATGTCTGGTATTTAGTTACACGCATTTT +
Preference number: 3 (lower is better)
Translates to: LNSSVAARVLAE*SRCLVFSYTHF
Trigger: AAAATGCGTGTAACTAAATACCAGACATCTTGACCATTCAGCTAGAACCCTGGCAGCAACAGAGCTATTTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520164.6
3UTR GCA 72 bp TGGAAACAAGTGACATCTTTATTGGCAATCCCAATATaGCTGGATATGTCTCTAGGATTACATAAGCTTTCA +
Preference number: 3 (lower is better)
Translates to: WKQVTSLLAIPI*LDMSLGLHKLS
Trigger: TGAAAGCTTATGTAATCCTAGAGACATATCCAGGCATATTGGGATTGCCAATAAAGATGTCACTTGTTTCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS-3UTR CCA 90 bp TTGTGTAGCCACCATCAGAGCTATAGGAGGACGTGGGACCAAGTAAGATGCTGGGCCGAGAGGAGGCGGTaGCTGCGAGCGCCACGGAGC +
Preference number: 4 (lower is better)
Translates to: LCSHHQSYRRTWDQVRCWAERRR*LRAPRS
Trigger: GCTCCGTGGCGCTCGCAGCCACCGCCTCCTCTCGGC...CCAGCATCTTACTTGGTCCCACGTCCTCCTATAGCTCTGATGGTGGCTACACAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS-3UTR TCA 90 bp GTAAGATGCTGGCTCCTTGCAGACCCAAGGGTGTCCATCATGTTCATGTGGGGGTCCGGACCCAGGACCTaGCCGAATCCATCTCCGCGC +
Preference number: 4 (lower is better)
Translates to: VRCWLLADPRVSIMFMWGSGPRT*PNPSPR
Trigger: GCGCGGAGATGGATTCGGTCAGGTCCTGGGTCCGGA...CCCCCACATGAACATGATGGACACCCTTGGGTCTGCAAGGAGCCAGCATCTTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS-3UTR CCA 90 bp CTCCTTGCAGACCCAAGGGTGTCCATCATGTTCATGTGGGGGCACCACTACACCGAGAGGGCTGGAAGCTaGCTGGGATTCCTGGGGACG +
Preference number: 4 (lower is better)
Translates to: LLADPRVSIMFMWGHHYTERAGS*LGFLGT
Trigger: CGTCCCCAGGAATCCCAGCCAGCTTCCAGCCCTCTC...GGTGTAGTGGTGCCCCCACATGAACATGATGGACACCCTTGGGTCTGCAAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR GCA 90 bp GGACCAAGTAAGATGCTGGCTCCTTGCAGACCCAAGGGTGTCCATCATGTTCATCTATCCCGCGAGGACTaGGCACGCAGGGCCACGAGC +
Preference number: 4 (lower is better)
Translates to: GPSKMLAPCRPKGVHHVHLSRED*ARRATS
Trigger: GCTCGTGGCCCTGCGTGCGCAGTCCTCGCGGGATAG...ATGAACATGATGGACACCCTTGGGTCTGCAAGGAGCCAGCATCTTACTTGGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408929.7
CDS-3UTR GCA 90 bp ATGCTGGCTCCTTGCAGACCCAAGGGTGTCCATCATGTTCATGTGGGGGCACCAACCACGCCTGGGATGTaGCGGGGAGGAGTCTGTACT +
Preference number: 4 (lower is better)
Translates to: MLAPCRPKGVHHVHVGAPTTPGM*RGGVCT
Trigger: AGTACAGACTCCTCCCCGGCACATCCCAGGCGTGGT...TGGTGCCCCCACATGAACATGATGGACACCCTTGGGTCTGCAAGGAGCCAGCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR CCA 90 bp AGTCCGGTCATGGCTCTGAATCCATTTCCATTGCCGCTGGAGCAGGCAGGTGAAGAGAGGGCTGGAAGCTaGCTGGGATTCCTGGGGACG +
Preference number: 4 (lower is better)
Translates to: SPVMALNPFPLPLEQAGEERAGS*LGFLGT
Trigger: CGTCCCCAGGAATCCCAGCCAGCTTCCAGCCCTCTC...TTCACCTGCCTGCTCCAGCGGCAATGGAAATGGATTCAGAGCCATGACCGGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535548.1
CDS-3UTR CCA 90 bp GTAAGATGCTGGCTCCTTGCAGACCCAAGGGTGTCCATCATGTTCATGTGGGGGCATGCCACTGTGCGCTaGGGAGCTAGAGAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: VRCWLLADPRVSIMFMWGHATVR*GAREGW
Trigger: CCAGCCCTCTCTAGCTCCCCAGCGCACAGTGGCATG...CCCCCACATGAACATGATGGACACCCTTGGGTCTGCAAGGAGCCAGCATCTTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR CCA 90 bp GCAGACCCAAGGGTGTCCATCATGTTCATGTGGGGGCACCACTACACCCCCAAAGTTGAGGCGTGGAGCTaGAAGAGTATCCCCGCGGAG +
Preference number: 4 (lower is better)
Translates to: ADPRVSIMFMWGHHYTPKVEAWS*KSIPAE
Trigger: CTCCGCGGGGATACTCTTCCAGCTCCACGCCTCAAC...TTTGGGGGTGTAGTGGTGCCCCCACATGAACATGATGGACACCCTTGGGTCTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR TCA 90 bp GTCCCAAGAGGGTCAGTTTGTGTAGCCACCATCAGAGCTATAGGAGGACGTGGGCACGAGCTCAGGGACTaGGTTCCAGGTTCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: VPRGSVCVATIRAIGGRGHELRD*VPGSGG
Trigger: CCCTCCTGAACCTGGAACTCAGTCCCTGAGCTCGTG...CCCACGTCCTCCTATAGCTCTGATGGTGGCTACACAAACTGACCCTCTTGGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408929.7
CDS-3UTR GCA 90 bp AGGAGGACGTGGGACCAAGTAAGATGCTGGCTCCTTGCAGACCCAAGGGTGTCCATCCCCGCGGAGAGATaGTGCTTGTGTTGCGGATGT +
Preference number: 4 (lower is better)
Translates to: RRTWDQVRCWLLADPRVSIPAER*CLCCGC
Trigger: ACATCCGCAACACAAGCAGCATCTCTCCGCGGGGAT...GGACACCCTTGGGTCTGCAAGGAGCCAGCATCTTACTTGGTCCCACGTCCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR GCA 90 bp AGATGCTGGCTCCTTGCAGACCCAAGGGTGTCCATCATGTTCATGTGGGGGCACGGAGGATGGAGGATGTaGTGGAAGACCCAACGGTGG +
Preference number: 4 (lower is better)
Translates to: RCWLLADPRVSIMFMWGHGGWRM*WKTQRW
Trigger: CCACCGTTGGGTCTTCCAGCACATCCTCCATCCTCC...GTGCCCCCACATGAACATGATGGACACCCTTGGGTCTGCAAGGAGCCAGCATCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR GCA 90 bp CTTAGCACTGACTACGTCAATGACATCTTTTGTCCTTGTCCCAAGAGGGTCAGTAGAGGAGGCGGTGGCTaGGAGCGCCACGGAGCCCGG +
Preference number: 4 (lower is better)
Translates to: LSTDYVNDIFCPCPKRVSRGGGG*ERHGAR
Trigger: CCGGGCTCCGTGGCGCTCGCAGCCACCGCCTCCTCT...ACTGACCCTCTTGGGACAAGGACAAAAGATGTCATTGACGTAGTCAGTGCTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS-3UTR CCA 90 bp ATGGAGGATGTGCTGGAAGACCCAACGGTGGGACTTGATGACATGAACAGGCCACACCTCTACCACGCCTaGGATGTGCCGGGGAGGAGT +
Preference number: 4 (lower is better)
Translates to: MEDVLEDPTVGLDDMNRPHLYHA*DVPGRS
Trigger: ACTCCTCCCCGGCACATCCCAGGCGTGGTAGAGGTG...TGGCCTGTTCATGTCATCAAGTCCCACCGTTGGGTCTTCCAGCACATCCTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535548.1
CDS-3UTR CCA 90 bp ATGGAGGATGTGCTGGAAGACCCAACGGTGGGACTTGATGACATGAACAGGCCACATGCCACTGTGCGCTaGGGAGCTAGAGAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: MEDVLEDPTVGLDDMNRPHATVR*GAREGW
Trigger: CCAGCCCTCTCTAGCTCCCCAGCGCACAGTGGCATG...TGGCCTGTTCATGTCATCAAGTCCCACCGTTGGGTCTTCCAGCACATCCTCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535548.1
CDS-3UTR CCA 90 bp GGGAGGATGGAGGATGTGCTGGAAGACCCAACGGTGGGACTTGATGACATGAACGTTGAGGCGTGGAGCTaGAAGAGTATCCCCGCGGAG +
Preference number: 4 (lower is better)
Translates to: GRMEDVLEDPTVGLDDMNVEAWS*KSIPAE
Trigger: CTCCGCGGGGATACTCTTCCAGCTCCACGCCTCAAC...GTTCATGTCATCAAGTCCCACCGTTGGGTCTTCCAGCACATCCTCCATCCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535548.1
CDS-3UTR CCA 90 bp AGGACGTGGGACCAAGTAAGATGCTGGCTCCTTGCAGACCCAAGGGTGTCCATCGGATGGAGGATGTGCTaGAAGACCCAACGGTGGGAC +
Preference number: 4 (lower is better)
Translates to: RTWDQVRCWLLADPRVSIGWRMC*KTQRWD
Trigger: GTCCCACCGTTGGGTCTTCCAGCACATCCTCCATCC...GATGGACACCCTTGGGTCTGCAAGGAGCCAGCATCTTACTTGGTCCCACGTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR CCA 90 bp AGAGGGTCAGTTTGTGTAGCCACCATCAGAGCTATAGGAGGACGTGGGACCAAGGGTGAAGGGGAGCCTTaGGGCCTGATGACAGGGGCA +
Preference number: 4 (lower is better)
Translates to: RGSVCVATIRAIGGRGTKGEGEP*GLMTGA
Trigger: TGCCCCTGTCATCAGGCCCCAAGGCTCCCCTTCACC...CTTGGTCCCACGTCCTCCTATAGCTCTGATGGTGGCTACACAAACTGACCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR CCA 90 bp ATGGAGGATGTGCTGGAAGACCCAACGGTGGGACTTGATGACATGAACAGGCCAGGTGAAGGGGAGCCTTaGGGCCTGATGACAGGGGCA +
Preference number: 4 (lower is better)
Translates to: MEDVLEDPTVGLDDMNRPGEGEP*GLMTGA
Trigger: TGCCCCTGTCATCAGGCCCCAAGGCTCCCCTTCACC...TGGCCTGTTCATGTCATCAAGTCCCACCGTTGGGTCTTCCAGCACATCCTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535548.1
CDS-3UTR CCA 90 bp GATGCTGGCTCCTTGCAGACCCAAGGGTGTCCATCATGTTCATGTGGGGGCACCTCCATCATGTTCATGTaGGGGCACCACTACACCCCC +
Preference number: 4 (lower is better)
Translates to: DAGSLQTQGCPSCSCGGTSIMFM*GHHYTP
Trigger: GGGGGTGTAGTGGTGCCCCCACATGAACATGATGGA...GGTGCCCCCACATGAACATGATGGACACCCTTGGGTCTGCAAGGAGCCAGCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR TCA 90 bp AGGACGTGGGACCAAGTAAGATGCTGGCTCCTTGCAGACCCAAGGGTGTCCATCGTCCGGTCATGGCTCTaGATCCATTTCCATTGCCGC +
Preference number: 4 (lower is better)
Translates to: RTWDQVRCWLLADPRVSIVRSWL*IHFHCR
Trigger: GCGGCAATGGAAATGGATTCAGAGCCATGACCGGAC...GATGGACACCCTTGGGTCTGCAAGGAGCCAGCATCTTACTTGGTCCCACGTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR GCA 90 bp GATGTGCTGGAAGACCCAACGGTGGGACTTGATGACATGAACAGGCCACACATGACCACGCCTGGGATGTaGCGGGGAGGAGTCTGTACT +
Preference number: 4 (lower is better)
Translates to: DVLEDPTVGLDDMNRPHMTTPGM*RGGVCT
Trigger: AGTACAGACTCCTCCCCGGCACATCCCAGGCGTGGT...CATGTGTGGCCTGTTCATGTCATCAAGTCCCACCGTTGGGTCTTCCAGCACATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535548.1
CDS-3UTR GCA 90 bp GTCCCAAGAGGGTCAGTTTGTGTAGCCACCATCAGAGCTATAGGAGGACGTGGGCCCGCGGAGAGATGCTaGTTGTGTTGCGGATGTACC +
Preference number: 4 (lower is better)
Translates to: VPRGSVCVATIRAIGGRGPAERC*LCCGCT
Trigger: GGTACATCCGCAACACAAGCAGCATCTCTCCGCGGG...CCCACGTCCTCCTATAGCTCTGATGGTGGCTACACAAACTGACCCTCTTGGGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR GCA 90 bp CTGAAGAGGAAAATGGGAGGATGGAGGATGTGCTGGAAGACCCAACGGTGGGACCCCGCGGAGAGATGCTaGTTGTGTTGCGGATGTACC +
Preference number: 4 (lower is better)
Translates to: LKRKMGGWRMCWKTQRWDPAERC*LCCGCT
Trigger: GGTACATCCGCAACACAAGCAGCATCTCTCCGCGGG...GTCCCACCGTTGGGTCTTCCAGCACATCCTCCATCCTCCCATTTTCCTCTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535548.1
CDS-3UTR CCA 90 bp AGGAGGACGTGGGACCAAGTAAGATGCTGGCTCCTTGCAGACCCAAGGGTGTCCGGGGGTAGCTTCCGATaGATCGAGTCTTCTTGCTCT +
Preference number: 4 (lower is better)
Translates to: RRTWDQVRCWLLADPRVSGGSFR*IESSCS
Trigger: AGAGCAAGAAGACTCGATCCATCGGAAGCTACCCCC...GGACACCCTTGGGTCTGCAAGGAGCCAGCATCTTACTTGGTCCCACGTCCTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR CCA 90 bp GGACCAAGTAAGATGCTGGCTCCTTGCAGACCCAAGGGTGTCCATCATGTTCATCACCTCTACCACGCCTaGGATGTGCCGGGGAGGAGT +
Preference number: 4 (lower is better)
Translates to: GPSKMLAPCRPKGVHHVHHLYHA*DVPGRS
Trigger: ACTCCTCCCCGGCACATCCCAGGCGTGGTAGAGGTG...ATGAACATGATGGACACCCTTGGGTCTGCAAGGAGCCAGCATCTTACTTGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR CCA 90 bp AGTCCGGTCATGGCTCTGAATCCATTTCCATTGCCGCTGGAGCAGGCAGGTGAAGCTGGCTGGGATTCCTaGGGACGCTGTAGAGAGCTT +
Preference number: 4 (lower is better)
Translates to: SPVMALNPFPLPLEQAGEAGWDS*GRCREL
Trigger: AAGCTCTCTACAGCGTCCCCAGGAATCCCAGCCAGC...TTCACCTGCCTGCTCCAGCGGCAATGGAAATGGATTCAGAGCCATGACCGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535548.1
CDS-3UTR CCA 90 bp GGGAGGATGGAGGATGTGCTGGAAGACCCAACGGTGGGACTTGATGACATGAACGGAGCTAGAGAGGGCTaGAAGCTGGCTGGGATTCCT +
Preference number: 4 (lower is better)
Translates to: GRMEDVLEDPTVGLDDMNGAREG*KLAGIP
Trigger: AGGAATCCCAGCCAGCTTCCAGCCCTCTCTAGCTCC...GTTCATGTCATCAAGTCCCACCGTTGGGTCTTCCAGCACATCCTCCATCCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535548.1
CDS-3UTR CCA 90 bp TTGTGTAGCCACCATCAGAGCTATAGGAGGACGTGGGACCAAGTAAGATGCTGGCATGCCACTGTGCGCTaGGGAGCTAGAGAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LCSHHQSYRRTWDQVRCWHATVR*GAREGW
Trigger: CCAGCCCTCTCTAGCTCCCCAGCGCACAGTGGCATG...CCAGCATCTTACTTGGTCCCACGTCCTCCTATAGCTCTGATGGTGGCTACACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR CCA 90 bp CCCAAGAGGGTCAGTTTGTGTAGCCACCATCAGAGCTATAGGAGGACGTGGGACGGATGGAGGATGTGCTaGAAGACCCAACGGTGGGAC +
Preference number: 4 (lower is better)
Translates to: PKRVSLCSHHQSYRRTWDGWRMC*KTQRWD
Trigger: GTCCCACCGTTGGGTCTTCCAGCACATCCTCCATCC...GTCCCACGTCCTCCTATAGCTCTGATGGTGGCTACACAAACTGACCCTCTTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR CCA 90 bp CTGAAGAGGAAAATGGGAGGATGGAGGATGTGCTGGAAGACCCAACGGTGGGACGGATGGAGGATGTGCTaGAAGACCCAACGGTGGGAC +
Preference number: 4 (lower is better)
Translates to: LKRKMGGWRMCWKTQRWDGWRMC*KTQRWD
Trigger: GTCCCACCGTTGGGTCTTCCAGCACATCCTCCATCC...GTCCCACCGTTGGGTCTTCCAGCACATCCTCCATCCTCCCATTTTCCTCTTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535548.1
CDS-3UTR CCA 90 bp GTAAGATGCTGGCTCCTTGCAGACCCAAGGGTGTCCATCATGTTCATGTGGGGGCATTTCCATTGCCGCTaGAGCAGGCAGGTGAAGGGG +
Preference number: 4 (lower is better)
Translates to: VRCWLLADPRVSIMFMWGHFHCR*SRQVKG
Trigger: CCCCTTCACCTGCCTGCTCCAGCGGCAATGGAAATG...CCCCCACATGAACATGATGGACACCCTTGGGTCTGCAAGGAGCCAGCATCTTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR TCA 90 bp GTAAGATGCTGGCTCCTTGCAGACCCAAGGGTGTCCATCATGTTCATGTGGGGGGTCCGGTCATGGCTCTaGATCCATTTCCATTGCCGC +
Preference number: 4 (lower is better)
Translates to: VRCWLLADPRVSIMFMWGVRSWL*IHFHCR
Trigger: GCGGCAATGGAAATGGATTCAGAGCCATGACCGGAC...CCCCCACATGAACATGATGGACACCCTTGGGTCTGCAAGGAGCCAGCATCTTAC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR TCA 90 bp CTGAAGAGGAAAATGGGAGGATGGAGGATGTGCTGGAAGACCCAACGGTGGGACGTCCGGTCATGGCTCTaGATCCATTTCCATTGCCGC +
Preference number: 4 (lower is better)
Translates to: LKRKMGGWRMCWKTQRWDVRSWL*IHFHCR
Trigger: GCGGCAATGGAAATGGATTCAGAGCCATGACCGGAC...GTCCCACCGTTGGGTCTTCCAGCACATCCTCCATCCTCCCATTTTCCTCTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535548.1
CDS-3UTR TCA 90 bp GGACCAAGTAAGATGCTGGCTCCTTGCAGACCCAAGGGTGTCCATCATGTTCATGTGGTGGGGTTCTGGTaGGGAGGAATTCCCAAGGGG +
Preference number: 4 (lower is better)
Translates to: GPSKMLAPCRPKGVHHVHVVGFW*GGIPKG
Trigger: CCCCTTGGGAATTCCTCCTCACCAGAACCCCACCAC...ATGAACATGATGGACACCCTTGGGTCTGCAAGGAGCCAGCATCTTACTTGGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS-3UTR TCA 90 bp AGGAGGACGTGGGACCAAGTAAGATGCTGGCTCCTTGCAGACCCAAGGGTGTCCTCCAAACCGTGTTGCTaGAGTTCTATGGGGCTGTGT +
Preference number: 4 (lower is better)
Translates to: RRTWDQVRCWLLADPRVSSKPCC*SSMGLC
Trigger: ACACAGCCCCATAGAACTTCAGCAACACGGTTTGGA...GGACACCCTTGGGTCTGCAAGGAGCCAGCATCTTACTTGGTCCCACGTCCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS-3UTR GCA 90 bp GACGTGGGACCAAGTAAGATGCTGGCTCCTTGCAGACCCAAGGGTGTCCATCATAGAGGTCCTGTTCCGTaGGGACACCGTTGCTGTAGA +
Preference number: 4 (lower is better)
Translates to: DVGPSKMLAPCRPKGVHHRGPVP*GHRCCR
Trigger: TCTACAGCAACGGTGTCCGCACGGAACAGGACCTCT...ATGATGGACACCCTTGGGTCTGCAAGGAGCCAGCATCTTACTTGGTCCCACGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR GCA 90 bp ATGCTGGCTCCTTGCAGACCCAAGGGTGTCCATCATGTTCATGTGGGGGCACCATCAGGATCTCCAGGATaGCTAGGGATGACCTTCTGC +
Preference number: 4 (lower is better)
Translates to: MLAPCRPKGVHHVHVGAPSGSPG*LGMTFC
Trigger: GCAGAAGGTCATCCCTAGGCATCCTGGAGATCCTGA...TGGTGCCCCCACATGAACATGATGGACACCCTTGGGTCTGCAAGGAGCCAGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR GCA 90 bp GGGAGGATGGAGGATGTGCTGGAAGACCCAACGGTGGGACTTGATGACATGAACATCCCCGCGGAGAGATaGTGCTTGTGTTGCGGATGT +
Preference number: 4 (lower is better)
Translates to: GRMEDVLEDPTVGLDDMNIPAER*CLCCGC
Trigger: ACATCCGCAACACAAGCAGCATCTCTCCGCGGGGAT...GTTCATGTCATCAAGTCCCACCGTTGGGTCTTCCAGCACATCCTCCATCCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535548.1
CDS-3UTR GCA 90 bp AGAGGGTCAGTTTGTGTAGCCACCATCAGAGCTATAGGAGGACGTGGGACCAAGGGAGGATGGAGGATGTaGTGGAAGACCCAACGGTGG +
Preference number: 4 (lower is better)
Translates to: RGSVCVATIRAIGGRGTKGGWRM*WKTQRW
Trigger: CCACCGTTGGGTCTTCCAGCACATCCTCCATCCTCC...CTTGGTCCCACGTCCTCCTATAGCTCTGATGGTGGCTACACAAACTGACCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR GCA 90 bp AGGATGGAGGATGTGCTGGAAGACCCAACGGTGGGACTTGATGACATGAACAGGGGAGGATGGAGGATGTaGTGGAAGACCCAACGGTGG +
Preference number: 4 (lower is better)
Translates to: RMEDVLEDPTVGLDDMNRGGWRM*WKTQRW
Trigger: CCACCGTTGGGTCTTCCAGCACATCCTCCATCCTCC...CCTGTTCATGTCATCAAGTCCCACCGTTGGGTCTTCCAGCACATCCTCCATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535548.1
CDS-3UTR GCA 90 bp GCAGACCCAAGGGTGTCCATCATGTTCATGTGGGGGCACCACTACACCCCCAAAGACTGTTCCCAACGTTaGCAGCAAATCGTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: ADPRVSIMFMWGHHYTPKDCSQR*QQIVSS
Trigger: GGAGGAGACGATTTGCTGGCAACGTTGGGAACAGTC...TTTGGGGGTGTAGTGGTGCCCCCACATGAACATGATGGACACCCTTGGGTCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS-3UTR CCA 90 bp AGGATGGAGGATGTGCTGGAAGACCCAACGGTGGGACTTGATGACATGAACAGGCATTTCCATTGCCGCTaGAGCAGGCAGGTGAAGGGG +
Preference number: 4 (lower is better)
Translates to: RMEDVLEDPTVGLDDMNRHFHCR*SRQVKG
Trigger: CCCCTTCACCTGCCTGCTCCAGCGGCAATGGAAATG...CCTGTTCATGTCATCAAGTCCCACCGTTGGGTCTTCCAGCACATCCTCCATCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535548.1
CDS-3UTR CCA 90 bp AGCTATAGGAGGACGTGGGACCAAGTAAGATGCTGGCTCCTTGCAGACCCAAGGTCCATCATGTTCATGTaGGGGCACCACTACACCCCC +
Preference number: 4 (lower is better)
Translates to: SYRRTWDQVRCWLLADPRSIMFM*GHHYTP
Trigger: GGGGGTGTAGTGGTGCCCCCACATGAACATGATGGA...CCTTGGGTCTGCAAGGAGCCAGCATCTTACTTGGTCCCACGTCCTCCTATAGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR CCA 90 bp TGGCTCCTTGCAGACCCAAGGGTGTCCATCATGTTCATGTGGGGGCACCACTACGACCAAGTAAGATGCTaGCTCCTTGCAGACCCAAGG +
Preference number: 4 (lower is better)
Translates to: WLLADPRVSIMFMWGHHYDQVRC*LLADPR
Trigger: CCTTGGGTCTGCAAGGAGCCAGCATCTTACTTGGTC...GTAGTGGTGCCCCCACATGAACATGATGGACACCCTTGGGTCTGCAAGGAGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR TCA 90 bp AGCTATAGGAGGACGTGGGACCAAGTAAGATGCTGGCTCCTTGCAGACCCAAGGGGCTGCCATAGGAGTTaGTTCCCATCATGCCACTGT +
Preference number: 4 (lower is better)
Translates to: SYRRTWDQVRCWLLADPRGCHRS*FPSCHC
Trigger: ACAGTGGCATGATGGGAATCAACTCCTATGGCAGCC...CCTTGGGTCTGCAAGGAGCCAGCATCTTACTTGGTCCCACGTCCTCCTATAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR TCA 90 bp CTGAAGAGGAAAATGGGAGGATGGAGGATGTGCTGGAAGACCCAACGGTGGGACGGCTGCCATAGGAGTTaGTTCCCATCATGCCACTGT +
Preference number: 4 (lower is better)
Translates to: LKRKMGGWRMCWKTQRWDGCHRS*FPSCHC
Trigger: ACAGTGGCATGATGGGAATCAACTCCTATGGCAGCC...GTCCCACCGTTGGGTCTTCCAGCACATCCTCCATCCTCCCATTTTCCTCTTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535548.1
CDS-3UTR TCA 90 bp TGTAGCCACCATCAGAGCTATAGGAGGACGTGGGACCAAGTAAGATGCTGGCTCTTGACTCTGAGATGCTaGCCCCAAGCTGGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: CSHHQSYRRTWDQVRCWLLTLRC*PQAGCH
Trigger: ATGGCAGCCAGCTTGGGGTCAGCATCTCAGAGTCAA...GAGCCAGCATCTTACTTGGTCCCACGTCCTCCTATAGCTCTGATGGTGGCTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR TCA 90 bp ATGGAGGATGTGCTGGAAGACCCAACGGTGGGACTTGATGACATGAACAGGCCATTGACTCTGAGATGCTaGCCCCAAGCTGGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: MEDVLEDPTVGLDDMNRPLTLRC*PQAGCH
Trigger: ATGGCAGCCAGCTTGGGGTCAGCATCTCAGAGTCAA...TGGCCTGTTCATGTCATCAAGTCCCACCGTTGGGTCTTCCAGCACATCCTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535548.1
CDS-3UTR TCA 90 bp TGGCTCCTTGCAGACCCAAGGGTGTCCATCATGTTCATGTGGGGGCACCACTACGTTACAACACAGTCCTaGCTGTTCCCAACGTTGCCA +
Preference number: 4 (lower is better)
Translates to: WLLADPRVSIMFMWGHHYVTTQS*LFPTLP
Trigger: TGGCAACGTTGGGAACAGTCAGGACTGTGTTGTAAC...GTAGTGGTGCCCCCACATGAACATGATGGACACCCTTGGGTCTGCAAGGAGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS-3UTR TCA 90 bp CTCCTTGCAGACCCAAGGGTGTCCATCATGTTCATGTGGGGGCACCACTACACCCTTTCCTTGGGATGCTaGAAGCCTGAGACAGACTCA +
Preference number: 4 (lower is better)
Translates to: LLADPRVSIMFMWGHHYTLSLGC*KPETDS
Trigger: TGAGTCTGTCTCAGGCTTTCAGCATCCCAAGGAAAG...GGTGTAGTGGTGCCCCCACATGAACATGATGGACACCCTTGGGTCTGCAAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS-3UTR TCA 90 bp AGAGGGTCAGTTTGTGTAGCCACCATCAGAGCTATAGGAGGACGTGGGACCAAGTGTGTACCTCTGTACTaGACCAGGCACCCAAAGCGG +
Preference number: 4 (lower is better)
Translates to: RGSVCVATIRAIGGRGTKCVPLY*TRHPKR
Trigger: CCGCTTTGGGTGCCTGGTTCAGTACAGAGGTACACA...CTTGGTCCCACGTCCTCCTATAGCTCTGATGGTGGCTACACAAACTGACCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS-3UTR CCA 90 bp GATGCTGGCTCCTTGCAGACCCAAGGGTGTCCATCATGTTCATGTGGGGGCACCAGTGAGTGCCGTTGTTaGTCTTCTCGTTGCCTTGTT +
Preference number: 4 (lower is better)
Translates to: DAGSLQTQGCPSCSCGGTSECRC*SSRCLV
Trigger: AACAAGGCAACGAGAAGACCAACAACGGCACTCACT...GGTGCCCCCACATGAACATGATGGACACCCTTGGGTCTGCAAGGAGCCAGCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR CCA 90 bp GCTCTTAGCACTGACTACGTCAATGACATCTTTTGTCCTTGTCCCAAGAGGGTCCACCTCTACCACGCCTaGGATGTGCCGGGGAGGAGT +
Preference number: 4 (lower is better)
Translates to: ALSTDYVNDIFCPCPKRVHLYHA*DVPGRS
Trigger: ACTCCTCCCCGGCACATCCCAGGCGTGGTAGAGGTG...GACCCTCTTGGGACAAGGACAAAAGATGTCATTGACGTAGTCAGTGCTAAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR CCA 90 bp GGACCAAGTAAGATGCTGGCTCCTTGCAGACCCAAGGGTGTCCATCATGTTCATGCTGGCTGGGATTCCTaGGGACGCTGTAGAGAGCTT +
Preference number: 4 (lower is better)
Translates to: GPSKMLAPCRPKGVHHVHAGWDS*GRCREL
Trigger: AAGCTCTCTACAGCGTCCCCAGGAATCCCAGCCAGC...ATGAACATGATGGACACCCTTGGGTCTGCAAGGAGCCAGCATCTTACTTGGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR CCA 90 bp AGTCCGGTCATGGCTCTGAATCCATTTCCATTGCCGCTGGAGCAGGCAGGTGAACTGGAACACCCAAGTTaGCCATGGGGACATTGCTGT +
Preference number: 4 (lower is better)
Translates to: SPVMALNPFPLPLEQAGELEHPS*PWGHCC
Trigger: ACAGCAATGTCCCCATGGCCAACTTGGGTGTTCCAG...TTCACCTGCCTGCTCCAGCGGCAATGGAAATGGATTCAGAGCCATGACCGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535548.1
CDS-3UTR CCA 90 bp ACATCTTTTGTCCTTGTCCCAAGAGGGTCAGTTTGTGTAGCCACCATCAGAGCTGGTGAAGGGGAGCCTTaGGGCCTGATGACAGGGGCA +
Preference number: 4 (lower is better)
Translates to: TSFVLVPRGSVCVATIRAGEGEP*GLMTGA
Trigger: TGCCCCTGTCATCAGGCCCCAAGGCTCCCCTTCACC...AGCTCTGATGGTGGCTACACAAACTGACCCTCTTGGGACAAGGACAAAAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR CCA 90 bp GTCCTTGTCCCAAGAGGGTCAGTTTGTGTAGCCACCATCAGAGCTATAGGAGGAAAGCGGAGGGAGTGGTaGGGTTCTGGTGAGGAGGAA +
Preference number: 4 (lower is better)
Translates to: VLVPRGSVCVATIRAIGGKRREW*GSGEEE
Trigger: TTCCTCCTCACCAGAACCCCACCACTCCCTCCGCTT...TCCTCCTATAGCTCTGATGGTGGCTACACAAACTGACCCTCTTGGGACAAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS-3UTR CCA 90 bp ATGCTGGCTCCTTGCAGACCCAAGGGTGTCCATCATGTTCATGTGGGGGCACCAGTGGGCCTGCATCAATaGGTCAAAGAGAAGGTATGC +
Preference number: 4 (lower is better)
Translates to: MLAPCRPKGVHHVHVGAPVGLHQ*VKEKVC
Trigger: GCATACCTTCTCTTTGACCCATTGATGCAGGCCCAC...TGGTGCCCCCACATGAACATGATGGACACCCTTGGGTCTGCAAGGAGCCAGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS-3UTR TCA 90 bp GCAGACCCAAGGGTGTCCATCATGTTCATGTGGGGGCACCACTACACCCCCAAACACATTCACCGTTGTTaGCAACACAACCTGAAACCG +
Preference number: 4 (lower is better)
Translates to: ADPRVSIMFMWGHHYTPKHIHRC*QHNLKP
Trigger: CGGTTTCAGGTTGTGTTGTCAACAACGGTGAATGTG...TTTGGGGGTGTAGTGGTGCCCCCACATGAACATGATGGACACCCTTGGGTCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR TCA 90 bp CTCCTTGCAGACCCAAGGGTGTCCATCATGTTCATGTGGGGGCACCACTACACCGAGGAGTCTGTACTCTaGTGGCATGAGGGGTTATTA +
Preference number: 4 (lower is better)
Translates to: LLADPRVSIMFMWGHHYTEESVL*WHEGLL
Trigger: TAATAACCCCTCATGCCATCAGAGTACAGACTCCTC...GGTGTAGTGGTGCCCCCACATGAACATGATGGACACCCTTGGGTCTGCAAGGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR TCA 90 bp CTGAAGAGGAAAATGGGAGGATGGAGGATGTGCTGGAAGACCCAACGGTGGGACTGGGACTTGATGACATaGACAGGCCACACATGCTCT +
Preference number: 4 (lower is better)
Translates to: LKRKMGGWRMCWKTQRWDWDLMT*TGHTCS
Trigger: AGAGCATGTGTGGCCTGTTCATGTCATCAAGTCCCA...GTCCCACCGTTGGGTCTTCCAGCACATCCTCCATCCTCCCATTTTCCTCTTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535548.1
CDS-3UTR GCA 90 bp GTCCCAAGAGGGTCAGTTTGTGTAGCCACCATCAGAGCTATAGGAGGACGTGGGTGGATCGAGTCTTCTTaGTCTCCGTCCATGCTTGGA +
Preference number: 4 (lower is better)
Translates to: VPRGSVCVATIRAIGGRGWIESS*SPSMLG
Trigger: TCCAAGCATGGACGGAGAGCAAGAAGACTCGATCCA...CCCACGTCCTCCTATAGCTCTGATGGTGGCTACACAAACTGACCCTCTTGGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR GCA 90 bp ATGGAGGATGTGCTGGAAGACCCAACGGTGGGACTTGATGACATGAACAGGCCATCAGGATCTCCAGGATaGCTAGGGATGACCTTCTGC +
Preference number: 4 (lower is better)
Translates to: MEDVLEDPTVGLDDMNRPSGSPG*LGMTFC
Trigger: GCAGAAGGTCATCCCTAGGCATCCTGGAGATCCTGA...TGGCCTGTTCATGTCATCAAGTCCCACCGTTGGGTCTTCCAGCACATCCTCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535548.1
CDS-3UTR GCA 90 bp GATGCTGGCTCCTTGCAGACCCAAGGGTGTCCATCATGTTCATGTGGGGGCACCAGCTTCAGCAATGTCTaGGGCTCGCTTCAAAATGAT +
Preference number: 4 (lower is better)
Translates to: DAGSLQTQGCPSCSCGGTSFSNV*GSLQND
Trigger: ATCATTTTGAAGCGAGCCGCAGACATTGCTGAAGCT...GGTGCCCCCACATGAACATGATGGACACCCTTGGGTCTGCAAGGAGCCAGCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR GCA 90 bp GACGTGGGACCAAGTAAGATGCTGGCTCCTTGCAGACCCAAGGGTGTCCATCATTTCCAGCTGCAGTGCTaGCTCCTGAAAGTGATCACA +
Preference number: 4 (lower is better)
Translates to: DVGPSKMLAPCRPKGVHHFQLQC*LLKVIT
Trigger: TGTGATCACTTTCAGGAGGCAGCACTGCAGCTGGAA...ATGATGGACACCCTTGGGTCTGCAAGGAGCCAGCATCTTACTTGGTCCCACGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS-3UTR CCA 90 bp GCAGACCCAAGGGTGTCCATCATGTTCATGTGGGGGCACCACTACACCCCCAAACCGTCTCATGTCCCTTaGGTTTCCTGCTGTTTTCAA +
Preference number: 4 (lower is better)
Translates to: ADPRVSIMFMWGHHYTPKPSHVP*VSCCFQ
Trigger: TTGAAAACAGCAGGAAACCCAAGGGACATGAGACGG...TTTGGGGGTGTAGTGGTGCCCCCACATGAACATGATGGACACCCTTGGGTCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR CCA 90 bp ATGGAGGATGTGCTGGAAGACCCAACGGTGGGACTTGATGACATGAACAGGCCACACCCAAGTTGGCCATaGGGACATTGCTGTAGCCAT +
Preference number: 4 (lower is better)
Translates to: MEDVLEDPTVGLDDMNRPHPSWP*GHCCSH
Trigger: ATGGCTACAGCAATGTCCCCATGGCCAACTTGGGTG...TGGCCTGTTCATGTCATCAAGTCCCACCGTTGGGTCTTCCAGCACATCCTCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535548.1
CDS-3UTR CCA 90 bp AGCTATAGGAGGACGTGGGACCAAGTAAGATGCTGGCTCCTTGCAGACCCAAGGAGCTATAGGAGGACGTaGGACCAAGTAAGATGCTGG +
Preference number: 4 (lower is better)
Translates to: SYRRTWDQVRCWLLADPRSYRRT*DQVRCW
Trigger: CCAGCATCTTACTTGGTCCCACGTCCTCCTATAGCT...CCTTGGGTCTGCAAGGAGCCAGCATCTTACTTGGTCCCACGTCCTCCTATAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR TCA 90 bp AGAGGGTCAGTTTGTGTAGCCACCATCAGAGCTATAGGAGGACGTGGGACCAAGTGTACTCTGATGGCATaGGGGGTTATTAGCTCGCTC +
Preference number: 4 (lower is better)
Translates to: RGSVCVATIRAIGGRGTKCTLMA*GVISSL
Trigger: GAGCGAGCTAATAACCCCTCATGCCATCAGAGTACA...CTTGGTCCCACGTCCTCCTATAGCTCTGATGGTGGCTACACAAACTGACCCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR TCA 90 bp ATGGAGGATGTGCTGGAAGACCCAACGGTGGGACTTGATGACATGAACAGGCCATGTACTCTGATGGCATaGGGGGTTATTAGCTCGCTC +
Preference number: 4 (lower is better)
Translates to: MEDVLEDPTVGLDDMNRPCTLMA*GVISSL
Trigger: GAGCGAGCTAATAACCCCTCATGCCATCAGAGTACA...TGGCCTGTTCATGTCATCAAGTCCCACCGTTGGGTCTTCCAGCACATCCTCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535548.1
CDS-3UTR TCA 90 bp ATGCTGGCTCCTTGCAGACCCAAGGGTGTCCATCATGTTCATGTGGGGGCACCATTAATGCTGTGTAAATaGACCTTCCTGGGGCTCCTT +
Preference number: 4 (lower is better)
Translates to: MLAPCRPKGVHHVHVGAPLMLCK*TFLGLL
Trigger: AAGGAGCCCCAGGAAGGTTCATTTACACAGCATTAA...TGGTGCCCCCACATGAACATGATGGACACCCTTGGGTCTGCAAGGAGCCAGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR TCA 90 bp GGGAGGATGGAGGATGTGCTGGAAGACCCAACGGTGGGACTTGATGACATGAACCGGCTCGCTTCAAAATaGTGTCCTGGTTATTGTGTG +
Preference number: 4 (lower is better)
Translates to: GRMEDVLEDPTVGLDDMNRLASK*CPGYCV
Trigger: CACACAATAACCAGGACATCATTTTGAAGCGAGCCG...GTTCATGTCATCAAGTCCCACCGTTGGGTCTTCCAGCACATCCTCCATCCTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535548.1
CDS-3UTR TCA 90 bp GTCCTTGTCCCAAGAGGGTCAGTTTGTGTAGCCACCATCAGAGCTATAGGAGGAGGCTGCCATAGGAGTTaGTTCCCATCATGCCACTGT +
Preference number: 4 (lower is better)
Translates to: VLVPRGSVCVATIRAIGGGCHRS*FPSCHC
Trigger: ACAGTGGCATGATGGGAATCAACTCCTATGGCAGCC...TCCTCCTATAGCTCTGATGGTGGCTACACAAACTGACCCTCTTGGGACAAGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR TCA 90 bp GATGCTGGCTCCTTGCAGACCCAAGGGTGTCCATCATGTTCATGTGGGGGCACCTTGCGGATGTACCCTTaGTTATTTCCTTGTGTTGAC +
Preference number: 4 (lower is better)
Translates to: DAGSLQTQGCPSCSCGGTLRMYP*LFPCVD
Trigger: GTCAACACAAGGAAATAATCAAGGGTACATCCGCAA...GGTGCCCCCACATGAACATGATGGACACCCTTGGGTCTGCAAGGAGCCAGCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR TCA 90 bp TGTAGCCACCATCAGAGCTATAGGAGGACGTGGGACCAAGTAAGATGCTGGCTCTGGGACTTGATGACATaGTTCCATAAGGAGAGCCGG +
Preference number: 4 (lower is better)
Translates to: CSHHQSYRRTWDQVRCWLWDLMT*FHKESR
Trigger: CCGGCTCTCCTTATGGAATCATGTCATCAAGTCCCA...GAGCCAGCATCTTACTTGGTCCCACGTCCTCCTATAGCTCTGATGGTGGCTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR TCA 90 bp GCAGACCCAAGGGTGTCCATCATGTTCATGTGGGGGCACCACTACACCCCCAAAAGGCACTCTTCTGTTTaGCAGCAGGAAAAACTGAAG +
Preference number: 4 (lower is better)
Translates to: ADPRVSIMFMWGHHYTPKRHSSV*QQEKLK
Trigger: CTTCAGTTTTTCCTGCTGTCAAACAGAAGAGTGCCT...TTTGGGGGTGTAGTGGTGCCCCCACATGAACATGATGGACACCCTTGGGTCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR GCA 90 bp GTCCTTGTCCCAAGAGGGTCAGTTTGTGTAGCCACCATCAGAGCTATAGGAGGACTACACATCACTTCGTaGGTCAGGAGAACTCGGCAC +
Preference number: 4 (lower is better)
Translates to: VLVPRGSVCVATIRAIGGLHITS*VRRTRH
Trigger: GTGCCGAGTTCTCCTGACGCACGAAGTGATGTGTAG...TCCTCCTATAGCTCTGATGGTGGCTACACAAACTGACCCTCTTGGGACAAGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR GCA 90 bp GACAGGGAGAGGAAAGGACTTGGATGTTCTAAGACTGACTCTAAAGAGTCCATCCCGCAAGTTCAGATCTaGCGCCTCAGCCACTCCACC +
Preference number: 4 (lower is better)
Translates to: DRERKGLGCSKTDSKESIPQVQI*RLSHST
Trigger: GGTGGAGTGGCTGAGGCGGCAGATCTGAACTTGCGG...GATGGACTCTTTAGAGTCAGTCTTAGAACATCCAAGTCCTTTCCTCTCCCTGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS-3UTR GCA 90 bp TGTAGCCACCATCAGAGCTATAGGAGGACGTGGGACCAAGTAAGATGCTGGCTCGGGAATTCTCTGGACTaGTCAGGGGAGAACGTTGAA +
Preference number: 4 (lower is better)
Translates to: CSHHQSYRRTWDQVRCWLGNSLD*SGENVE
Trigger: TTCAACGTTCTCCCCTGAGCAGTCCAGAGAATTCCC...GAGCCAGCATCTTACTTGGTCCCACGTCCTCCTATAGCTCTGATGGTGGCTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS-3UTR CCA 90 bp TGGCTCCTTGCAGACCCAAGGGTGTCCATCATGTTCATGTGGGGGCACCACTACGTCCTGGTTATTGTGTaGTGTGCCATAAAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: WLLADPRVSIMFMWGHHYVLVIV*CAIKSF
Trigger: GAAGCTCTTTATGGCACACCACACAATAACCAGGAC...GTAGTGGTGCCCCCACATGAACATGATGGACACCCTTGGGTCTGCAAGGAGCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR CCA 90 bp TTAGCACTGACTACGTCAATGACATCTTTTGTCCTTGTCCCAAGAGGGTCAGTTGAGAGGGCTGGAAGCTaGCTGGGATTCCTGGGGACG +
Preference number: 4 (lower is better)
Translates to: LALTTSMTSFVLVPRGSVERAGS*LGFLGT
Trigger: CGTCCCCAGGAATCCCAGCCAGCTTCCAGCCCTCTC...AACTGACCCTCTTGGGACAAGGACAAAAGATGTCATTGACGTAGTCAGTGCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR CCA 90 bp AGGCAAGGTTCTTCCCCTCTAAGAGCTAGTCACAAAACGATGAAGAGCCCATCAGGAGCTAGAGAGGGCTaGAAGCTGGCTGGGATTCCT +
Preference number: 4 (lower is better)
Translates to: RQGSSPLRASHKTMKSPSGAREG*KLAGIP
Trigger: AGGAATCCCAGCCAGCTTCCAGCCCTCTCTAGCTCC...TGATGGGCTCTTCATCGTTTTGTGACTAGCTCTTAGAGGGGAAGAACCTTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS-3UTR CCA 90 bp GCTCTTAGCACTGACTACGTCAATGACATCTTTTGTCCTTGTCCCAAGAGGGTCCATTTCCATTGCCGCTaGAGCAGGCAGGTGAAGGGG +
Preference number: 4 (lower is better)
Translates to: ALSTDYVNDIFCPCPKRVHFHCR*SRQVKG
Trigger: CCCCTTCACCTGCCTGCTCCAGCGGCAATGGAAATG...GACCCTCTTGGGACAAGGACAAAAGATGTCATTGACGTAGTCAGTGCTAAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR CCA 90 bp TGTAGCCACCATCAGAGCTATAGGAGGACGTGGGACCAAGTAAGATGCTGGCTCAGCTATAGGAGGACGTaGGACCAAGTAAGATGCTGG +
Preference number: 4 (lower is better)
Translates to: CSHHQSYRRTWDQVRCWLSYRRT*DQVRCW
Trigger: CCAGCATCTTACTTGGTCCCACGTCCTCCTATAGCT...GAGCCAGCATCTTACTTGGTCCCACGTCCTCCTATAGCTCTGATGGTGGCTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR CCA 90 bp GTCCCAAGAGGGTCAGTTTGTGTAGCCACCATCAGAGCTATAGGAGGACGTGGGTGTTCTGGGAGAAACTaGAGGAAATTGATGGCTGCC +
Preference number: 4 (lower is better)
Translates to: VPRGSVCVATIRAIGGRGCSGRN*RKLMAA
Trigger: GGCAGCCATCAATTTCCTCCAGTTTCTCCCAGAACA...CCCACGTCCTCCTATAGCTCTGATGGTGGCTACACAAACTGACCCTCTTGGGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS-3UTR CCA 90 bp GTAAGATGCTGGCTCCTTGCAGACCCAAGGGTGTCCATCATGTTCATGTGGGGGAGGTGCTTCTTTCCTTaGGATGCTGAAAGCCTGAGA +
Preference number: 4 (lower is better)
Translates to: VRCWLLADPRVSIMFMWGRCFFP*DAESLR
Trigger: TCTCAGGCTTTCAGCATCCCAAGGAAAGAAGCACCT...CCCCCACATGAACATGATGGACACCCTTGGGTCTGCAAGGAGCCAGCATCTTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS-3UTR TCA 90 bp ATGGAGGATGTGCTGGAAGACCCAACGGTGGGACTTGATGACATGAACAGGCCAGAGGAGTCTGTACTCTaGTGGCATGAGGGGTTATTA +
Preference number: 4 (lower is better)
Translates to: MEDVLEDPTVGLDDMNRPEESVL*WHEGLL
Trigger: TAATAACCCCTCATGCCATCAGAGTACAGACTCCTC...TGGCCTGTTCATGTCATCAAGTCCCACCGTTGGGTCTTCCAGCACATCCTCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535548.1
CDS-3UTR TCA 90 bp CTGAAGAGGAAAATGGGAGGATGGAGGATGTGCTGGAAGACCCAACGGTGGGACTTAATGCTGTGTAAATaGACCTTCCTGGGGCTCCTT +
Preference number: 4 (lower is better)
Translates to: LKRKMGGWRMCWKTQRWDLMLCK*TFLGLL
Trigger: AAGGAGCCCCAGGAAGGTTCATTTACACAGCATTAA...GTCCCACCGTTGGGTCTTCCAGCACATCCTCCATCCTCCCATTTTCCTCTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535548.1
CDS-3UTR TCA 90 bp ACATCTTTTGTCCTTGTCCCAAGAGGGTCAGTTTGTGTAGCCACCATCAGAGCTTTGACTCTGAGATGCTaGCCCCAAGCTGGCTGCCAT +
Preference number: 4 (lower is better)
Translates to: TSFVLVPRGSVCVATIRALTLRC*PQAGCH
Trigger: ATGGCAGCCAGCTTGGGGTCAGCATCTCAGAGTCAA...AGCTCTGATGGTGGCTACACAAACTGACCCTCTTGGGACAAGGACAAAAGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR TCA 90 bp CTCCTTGCAGACCCAAGGGTGTCCATCATGTTCATGTGGGGGCACCACTACACCTTGCGGATGTACCCTTaGTTATTTCCTTGTGTTGAC +
Preference number: 4 (lower is better)
Translates to: LLADPRVSIMFMWGHHYTLRMYP*LFPCVD
Trigger: GTCAACACAAGGAAATAATCAAGGGTACATCCGCAA...GGTGTAGTGGTGCCCCCACATGAACATGATGGACACCCTTGGGTCTGCAAGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR TCA 90 bp GTCCTTGTCCCAAGAGGGTCAGTTTGTGTAGCCACCATCAGAGCTATAGGAGGATGGGACTTGATGACATaGTTCCATAAGGAGAGCCGG +
Preference number: 4 (lower is better)
Translates to: VLVPRGSVCVATIRAIGGWDLMT*FHKESR
Trigger: CCGGCTCTCCTTATGGAATCATGTCATCAAGTCCCA...TCCTCCTATAGCTCTGATGGTGGCTACACAAACTGACCCTCTTGGGACAAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR TCA 90 bp GGGAGGATGGAGGATGTGCTGGAAGACCCAACGGTGGGACTTGATGACATGAACAGGCACTCTTCTGTTTaGCAGCAGGAAAAACTGAAG +
Preference number: 4 (lower is better)
Translates to: GRMEDVLEDPTVGLDDMNRHSSV*QQEKLK
Trigger: CTTCAGTTTTTCCTGCTGTCAAACAGAAGAGTGCCT...GTTCATGTCATCAAGTCCCACCGTTGGGTCTTCCAGCACATCCTCCATCCTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000535548.1
CDS-3UTR TCA 90 bp GTGGGACCAAGTAAGATGCTGGCTCCTTGCAGACCCAAGGGTGTCCATCATGTTGAAACTGGAGGAAATTaGTGGCTGCCTAATCTCTCC +
Preference number: 4 (lower is better)
Translates to: VGPSKMLAPCRPKGVHHVETGGN*WLPNLS
Trigger: GGAGAGATTAGGCAGCCATCAATTTCCTCCAGTTTC...AACATGATGGACACCCTTGGGTCTGCAAGGAGCCAGCATCTTACTTGGTCCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS-3UTR GCA 90 bp TTTGTCCTTGTCCCAAGAGGGTCAGTTTGTGTAGCCACCATCAGAGCTATAGGAAGAGGTCCTGTTCCGTaGGGACACCGTTGCTGTAGA +
Preference number: 4 (lower is better)
Translates to: FVLVPRGSVCVATIRAIGRGPVP*GHRCCR
Trigger: TCTACAGCAACGGTGTCCGCACGGAACAGGACCTCT...TCCTATAGCTCTGATGGTGGCTACACAAACTGACCCTCTTGGGACAAGGACAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR GCA 90 bp GTCCTTGTCCCAAGAGGGTCAGTTTGTGTAGCCACCATCAGAGCTATAGGAGGATGGATCGAGTCTTCTTaGTCTCCGTCCATGCTTGGA +
Preference number: 4 (lower is better)
Translates to: VLVPRGSVCVATIRAIGGWIESS*SPSMLG
Trigger: TCCAAGCATGGACGGAGAGCAAGAAGACTCGATCCA...TCCTCCTATAGCTCTGATGGTGGCTACACAAACTGACCCTCTTGGGACAAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR GCA 90 bp AGTCCGGTCATGGCTCTGAATCCATTTCCATTGCCGCTGGAGCAGGCAGGTGAAAGCTTCAGCAATGTCTaGGGCTCGCTTCAAAATGAT +
Preference number: 4 (lower is better)
Translates to: SPVMALNPFPLPLEQAGESFSNV*GSLQND
Trigger: ATCATTTTGAAGCGAGCCGCAGACATTGCTGAAGCT...TTCACCTGCCTGCTCCAGCGGCAATGGAAATGGATTCAGAGCCATGACCGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535548.1
CDS-3UTR GCA 90 bp TTTTGTCCTTGTCCCAAGAGGGTCAGTTTGTGTAGCCACCATCAGAGCTATAGGATCCCCGCGGAGAGATaGTGCTTGTGTTGCGGATGT +
Preference number: 4 (lower is better)
Translates to: FCPCPKRVSLCSHHQSYRIPAER*CLCCGC
Trigger: ACATCCGCAACACAAGCAGCATCTCTCCGCGGGGAT...CCTATAGCTCTGATGGTGGCTACACAAACTGACCCTCTTGGGACAAGGACAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR CCA 90 bp GCAGACCCAAGGGTGTCCATCATGTTCATGTGGGGGCACCACTACACCCCCAAACTCTCCGTCCATGCTTaGAGTTGTTATGAACAAACA +
Preference number: 4 (lower is better)
Translates to: ADPRVSIMFMWGHHYTPKLSVHA*SCYEQT
Trigger: TGTTTGTTCATAACAACTCCAAGCATGGACGGAGAG...TTTGGGGGTGTAGTGGTGCCCCCACATGAACATGATGGACACCCTTGGGTCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR CCA 90 bp CTGAAGAGGAAAATGGGAGGATGGAGGATGTGCTGGAAGACCCAACGGTGGGACGTCCCAAACACCACTTaGAGACCATCAAAGAAGTTG +
Preference number: 4 (lower is better)
Translates to: LKRKMGGWRMCWKTQRWDVPNTT*RPSKKL
Trigger: CAACTTCTTTGATGGTCTCCAAGTGGTGTTTGGGAC...GTCCCACCGTTGGGTCTTCCAGCACATCCTCCATCCTCCCATTTTCCTCTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535548.1
CDS-3UTR CCA 90 bp TGGCTCCTTGCAGACCCAAGGGTGTCCATCATGTTCATGTGGGGGCACCACTACGGAAGCCATAGTCTATaGTGGGTTCATTTAATGCTG +
Preference number: 4 (lower is better)
Translates to: WLLADPRVSIMFMWGHHYGSHSL*WVHLML
Trigger: CAGCATTAAATGAACCCACCATAGACTATGGCTTCC...GTAGTGGTGCCCCCACATGAACATGATGGACACCCTTGGGTCTGCAAGGAGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR CCA 90 bp CTTAGCACTGACTACGTCAATGACATCTTTTGTCCTTGTCCCAAGAGGGTCAGTGCTGGCTGGGATTCCTaGGGACGCTGTAGAGAGCTT +
Preference number: 4 (lower is better)
Translates to: LSTDYVNDIFCPCPKRVSAGWDS*GRCREL
Trigger: AAGCTCTCTACAGCGTCCCCAGGAATCCCAGCCAGC...ACTGACCCTCTTGGGACAAGGACAAAAGATGTCATTGACGTAGTCAGTGCTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR CCA 90 bp GACTACGTCAATGACATCTTTTGTCCTTGTCCCAAGAGGGTCAGTTTGTGTAGCGGAGCTAGAGAGGGCTaGAAGCTGGCTGGGATTCCT +
Preference number: 4 (lower is better)
Translates to: DYVNDIFCPCPKRVSLCSGAREG*KLAGIP
Trigger: AGGAATCCCAGCCAGCTTCCAGCCCTCTCTAGCTCC...GCTACACAAACTGACCCTCTTGGGACAAGGACAAAAGATGTCATTGACGTAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR CCA 90 bp TTAGCACTGACTACGTCAATGACATCTTTTGTCCTTGTCCCAAGAGGGTCAGTTGTTGAGGCGTGGAGCTaGAAGAGTATCCCCGCGGAG +
Preference number: 4 (lower is better)
Translates to: LALTTSMTSFVLVPRGSVVEAWS*KSIPAE
Trigger: CTCCGCGGGGATACTCTTCCAGCTCCACGCCTCAAC...AACTGACCCTCTTGGGACAAGGACAAAAGATGTCATTGACGTAGTCAGTGCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR CCA 90 bp TTCTGCATTAGGGTGTTCTGTGGGAATCTACATGTTCTTGCCCTTGGGTCAATAAAGAAGGGGAAGACCTaGAGCCGAGAGGAGGCGGTG +
Preference number: 4 (lower is better)
Translates to: FCIRVFCGNLHVLALGSIKKGKT*SREEAV
Trigger: CACCGCCTCCTCTCGGCTCCAGGTCTTCCCCTTCTT...TATTGACCCAAGGGCAAGAACATGTAGATTCCCACAGAACACCCTAATGCAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS-3UTR CCA 90 bp AGGACGTGGGACCAAGTAAGATGCTGGCTCCTTGCAGACCCAAGGGTGTCCATCAAGCATCACCTGTTCTaGGAGAAACTGGAGGAAATT +
Preference number: 4 (lower is better)
Translates to: RTWDQVRCWLLADPRVSIKHHLF*EKLEEI
Trigger: AATTTCCTCCAGTTTCTCCCAGAACAGGTGATGCTT...GATGGACACCCTTGGGTCTGCAAGGAGCCAGCATCTTACTTGGTCCCACGTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS-3UTR CCA 90 bp AGGACGTGGGACCAAGTAAGATGCTGGCTCCTTGCAGACCCAAGGGTGTCCATCGAAAGTCTTCCGTGCTaGTACCCTGTTTTGTTCAAT +
Preference number: 4 (lower is better)
Translates to: RTWDQVRCWLLADPRVSIESLPC*YPVLFN
Trigger: ATTGAACAAAACAGGGTACCAGCACGGAAGACTTTC...GATGGACACCCTTGGGTCTGCAAGGAGCCAGCATCTTACTTGGTCCCACGTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS-3UTR CCA 90 bp TTAGCACTGACTACGTCAATGACATCTTTTGTCCTTGTCCCAAGAGGGTCAGTTCCAAAGCGGAGGGAGTaGTGGGGTTCTGGTGAGGAG +
Preference number: 4 (lower is better)
Translates to: LALTTSMTSFVLVPRGSVPKRRE*WGSGEE
Trigger: CTCCTCACCAGAACCCCACCACTCCCTCCGCTTTGG...AACTGACCCTCTTGGGACAAGGACAAAAGATGTCATTGACGTAGTCAGTGCTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS-3UTR CCA 90 bp AGAGGGTCAGTTTGTGTAGCCACCATCAGAGCTATAGGAGGACGTGGGACCAAGGTTGCTGAAGTTCTATaGGGCTGTGTACCTCTGTAC +
Preference number: 4 (lower is better)
Translates to: RGSVCVATIRAIGGRGTKVAEVL*GCVPLY
Trigger: GTACAGAGGTACACAGCCCCATAGAACTTCAGCAAC...CTTGGTCCCACGTCCTCCTATAGCTCTGATGGTGGCTACACAAACTGACCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS-3UTR CCA 90 bp AGGAGGACGTGGGACCAAGTAAGATGCTGGCTCCTTGCAGACCCAAGGGTGTCCAGGGTTCTAGCTGAATaGTCAAGATGTCTGGTATTT +
Preference number: 4 (lower is better)
Translates to: RRTWDQVRCWLLADPRVSRVLAE*SRCLVF
Trigger: AAATACCAGACATCTTGACCATTCAGCTAGAACCCT...GGACACCCTTGGGTCTGCAAGGAGCCAGCATCTTACTTGGTCCCACGTCCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS-3UTR TCA 90 bp TTGTGTAGCCACCATCAGAGCTATAGGAGGACGTGGGACCAAGTAAGATGCTGGCCCTTGGCAGAAAAGTaGAGGGACTTGTCATTTGGA +
Preference number: 4 (lower is better)
Translates to: LCSHHQSYRRTWDQVRCWPLAEK*RDLSFG
Trigger: TCCAAATGACAAGTCCCTTCACTTTTCTGCCAAGGG...CCAGCATCTTACTTGGTCCCACGTCCTCCTATAGCTCTGATGGTGGCTACACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408929.7
CDS-3UTR TCA 90 bp GGACCAAGTAAGATGCTGGCTCCTTGCAGACCCAAGGGTGTCCATCATGTTCATGTTGACAACACAACCTaGAACCGTCTCATGTCCCTT +
Preference number: 4 (lower is better)
Translates to: GPSKMLAPCRPKGVHHVHVDNTT*NRLMSL
Trigger: AAGGGACATGAGACGGTTTCAGGTTGTGTTGTCAAC...ATGAACATGATGGACACCCTTGGGTCTGCAAGGAGCCAGCATCTTACTTGGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR TCA 90 bp GGACCAAGTAAGATGCTGGCTCCTTGCAGACCCAAGGGTGTCCATCATGTTCATCGGCTCGCTTCAAAATaGTGTCCTGGTTATTGTGTG +
Preference number: 4 (lower is better)
Translates to: GPSKMLAPCRPKGVHHVHRLASK*CPGYCV
Trigger: CACACAATAACCAGGACATCATTTTGAAGCGAGCCG...ATGAACATGATGGACACCCTTGGGTCTGCAAGGAGCCAGCATCTTACTTGGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR TCA 90 bp GGGAGGATGGAGGATGTGCTGGAAGACCCAACGGTGGGACTTGATGACATGAACTTGCGGATGTACCCTTaGTTATTTCCTTGTGTTGAC +
Preference number: 4 (lower is better)
Translates to: GRMEDVLEDPTVGLDDMNLRMYP*LFPCVD
Trigger: GTCAACACAAGGAAATAATCAAGGGTACATCCGCAA...GTTCATGTCATCAAGTCCCACCGTTGGGTCTTCCAGCACATCCTCCATCCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535548.1
CDS-3UTR TCA 90 bp AGAGGGTCAGTTTGTGTAGCCACCATCAGAGCTATAGGAGGACGTGGGACCAAGAGGCACTCTTCTGTTTaGCAGCAGGAAAAACTGAAG +
Preference number: 4 (lower is better)
Translates to: RGSVCVATIRAIGGRGTKRHSSV*QQEKLK
Trigger: CTTCAGTTTTTCCTGCTGTCAAACAGAAGAGTGCCT...CTTGGTCCCACGTCCTCCTATAGCTCTGATGGTGGCTACACAAACTGACCCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR TCA 90 bp AGGAGGACGTGGGACCAAGTAAGATGCTGGCTCCTTGCAGACCCAAGGGTGTCCCATGATGTTTTTCCATaGGTGCTGCATCTATTTCTA +
Preference number: 4 (lower is better)
Translates to: RRTWDQVRCWLLADPRVSHDVFP*VLHLFL
Trigger: TAGAAATAGATGCAGCACTCATGGAAAAACATCATG...GGACACCCTTGGGTCTGCAAGGAGCCAGCATCTTACTTGGTCCCACGTCCTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS-3UTR GCA 90 bp TCTTTTGTCCTTGTCCCAAGAGGGTCAGTTTGTGTAGCCACCATCAGAGCTATACCGTGCGGACACCGTTaGTGTAGAGGAGCTGTAACT +
Preference number: 4 (lower is better)
Translates to: SFVLVPRGSVCVATIRAIPCGHR*CRGAVT
Trigger: AGTTACAGCTCCTCTACAGCAACGGTGTCCGCACGG...TATAGCTCTGATGGTGGCTACACAAACTGACCCTCTTGGGACAAGGACAAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR GCA 90 bp GTCCCAAGAGGGTCAGTTTGTGTAGCCACCATCAGAGCTATAGGAGGACGTGGGGTCCCTTGGGTTTCCTaGTGTTTTCAAACAATTCTG +
Preference number: 4 (lower is better)
Translates to: VPRGSVCVATIRAIGGRGVPWVS*CFQTIL
Trigger: CAGAATTGTTTGAAAACAGCAGGAAACCCAAGGGAC...CCCACGTCCTCCTATAGCTCTGATGGTGGCTACACAAACTGACCCTCTTGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR GCA 90 bp CCCAAGAGGGTCAGTTTGTGTAGCCACCATCAGAGCTATAGGAGGACGTGGGACGTCCCTTGGGTTTCCTaGTGTTTTCAAACAATTCTG +
Preference number: 4 (lower is better)
Translates to: PKRVSLCSHHQSYRRTWDVPWVS*CFQTIL
Trigger: CAGAATTGTTTGAAAACAGCAGGAAACCCAAGGGAC...GTCCCACGTCCTCCTATAGCTCTGATGGTGGCTACACAAACTGACCCTCTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR GCA 90 bp GCTCTTAGCACTGACTACGTCAATGACATCTTTTGTCCTTGTCCCAAGAGGGTCTCAGGATCTCCAGGATaGCTAGGGATGACCTTCTGC +
Preference number: 4 (lower is better)
Translates to: ALSTDYVNDIFCPCPKRVSGSPG*LGMTFC
Trigger: GCAGAAGGTCATCCCTAGGCATCCTGGAGATCCTGA...GACCCTCTTGGGACAAGGACAAAAGATGTCATTGACGTAGTCAGTGCTAAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR GCA 90 bp AGCTATAGGAGGACGTGGGACCAAGTAAGATGCTGGCTCCTTGCAGACCCAAGGGGTTATTGTGTGGTGTaGCATAAAGAGCTTCCACTA +
Preference number: 4 (lower is better)
Translates to: SYRRTWDQVRCWLLADPRGYCVV*HKELPL
Trigger: TAGTGGAAGCTCTTTATGGCACACCACACAATAACC...CCTTGGGTCTGCAAGGAGCCAGCATCTTACTTGGTCCCACGTCCTCCTATAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR GCA 90 bp AGTCCGGTCATGGCTCTGAATCCATTTCCATTGCCGCTGGAGCAGGCAGGTGAAAGATGCTGCTTGTGTTaGGGATGTACCCTTGATTAT +
Preference number: 4 (lower is better)
Translates to: SPVMALNPFPLPLEQAGERCCLC*GCTLDY
Trigger: ATAATCAAGGGTACATCCGCAACACAAGCAGCATCT...TTCACCTGCCTGCTCCAGCGGCAATGGAAATGGATTCAGAGCCATGACCGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535548.1
CDS-3UTR GCA 90 bp AGGCAAGGTTCTTCCCCTCTAAGAGCTAGTCACAAAACGATGAAGAGCCCATCATGGGACCAAGTAAGATaGTGGCTCCTTGCAGACCCA +
Preference number: 4 (lower is better)
Translates to: RQGSSPLRASHKTMKSPSWDQVR*WLLADP
Trigger: TGGGTCTGCAAGGAGCCAGCATCTTACTTGGTCCCA...TGATGGGCTCTTCATCGTTTTGTGACTAGCTCTTAGAGGGGAAGAACCTTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS-3UTR GCA 90 bp AGCTATAGGAGGACGTGGGACCAAGTAAGATGCTGGCTCCTTGCAGACCCAAGGCCAAGAATCTGGTCTTaGCTTTCTTCGAACATCAGA +
Preference number: 4 (lower is better)
Translates to: SYRRTWDQVRCWLLADPRPRIWS*LSSNIR
Trigger: TCTGATGTTCGAAGAAAGGCAAGACCAGATTCTTGG...CCTTGGGTCTGCAAGGAGCCAGCATCTTACTTGGTCCCACGTCCTCCTATAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS-3UTR CCA 90 bp AGAGGGTCAGTTTGTGTAGCCACCATCAGAGCTATAGGAGGACGTGGGACCAAGGTCCCAAACACCACTTaGAGACCATCAAAGAAGTTG +
Preference number: 4 (lower is better)
Translates to: RGSVCVATIRAIGGRGTKVPNTT*RPSKKL
Trigger: CAACTTCTTTGATGGTCTCCAAGTGGTGTTTGGGAC...CTTGGTCCCACGTCCTCCTATAGCTCTGATGGTGGCTACACAAACTGACCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR CCA 90 bp GGGAGGATGGAGGATGTGCTGGAAGACCCAACGGTGGGACTTGATGACATGAACGGAAGCCATAGTCTATaGTGGGTTCATTTAATGCTG +
Preference number: 4 (lower is better)
Translates to: GRMEDVLEDPTVGLDDMNGSHSL*WVHLML
Trigger: CAGCATTAAATGAACCCACCATAGACTATGGCTTCC...GTTCATGTCATCAAGTCCCACCGTTGGGTCTTCCAGCACATCCTCCATCCTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535548.1
CDS-3UTR CCA 90 bp AGGATGGAGGATGTGCTGGAAGACCCAACGGTGGGACTTGATGACATGAACAGGGTCCTGGTTATTGTGTaGTGTGCCATAAAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: RMEDVLEDPTVGLDDMNRVLVIV*CAIKSF
Trigger: GAAGCTCTTTATGGCACACCACACAATAACCAGGAC...CCTGTTCATGTCATCAAGTCCCACCGTTGGGTCTTCCAGCACATCCTCCATCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535548.1
CDS-3UTR CCA 90 bp AGGACGTGGGACCAAGTAAGATGCTGGCTCCTTGCAGACCCAAGGGTGTCCATCTTCAAAATGATGTCCTaGTTATTGTGTGGTGTGCCA +
Preference number: 4 (lower is better)
Translates to: RTWDQVRCWLLADPRVSIFKMMS*LLCGVP
Trigger: TGGCACACCACACAATAACCAGGACATCATTTTGAA...GATGGACACCCTTGGGTCTGCAAGGAGCCAGCATCTTACTTGGTCCCACGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR CCA 90 bp GCTCTTAGCACTGACTACGTCAATGACATCTTTTGTCCTTGTCCCAAGAGGGTCCACCCAAGTTGGCCATaGGGACATTGCTGTAGCCAT +
Preference number: 4 (lower is better)
Translates to: ALSTDYVNDIFCPCPKRVHPSWP*GHCCSH
Trigger: ATGGCTACAGCAATGTCCCCATGGCCAACTTGGGTG...GACCCTCTTGGGACAAGGACAAAAGATGTCATTGACGTAGTCAGTGCTAAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR CCA 90 bp TTTGTCCTTGTCCCAAGAGGGTCAGTTTGTGTAGCCACCATCAGAGCTATAGGACTGGAACACCCAAGTTaGCCATGGGGACATTGCTGT +
Preference number: 4 (lower is better)
Translates to: FVLVPRGSVCVATIRAIGLEHPS*PWGHCC
Trigger: ACAGCAATGTCCCCATGGCCAACTTGGGTGTTCCAG...TCCTATAGCTCTGATGGTGGCTACACAAACTGACCCTCTTGGGACAAGGACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR TCA 90 bp GTCCTTGTCCCAAGAGGGTCAGTTTGTGTAGCCACCATCAGAGCTATAGGAGGAAGAATCTGTCAATTATaGCTGGGTCCGATGGAGTCT +
Preference number: 4 (lower is better)
Translates to: VLVPRGSVCVATIRAIGGRICQL*LGPMES
Trigger: AGACTCCATCGGACCCAGTCATAATTGACAGATTCT...TCCTCCTATAGCTCTGATGGTGGCTACACAAACTGACCCTCTTGGGACAAGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR TCA 90 bp TTTTGTCCTTGTCCCAAGAGGGTCAGTTTGTGTAGCCACCATCAGAGCTATAGGTGTACTCTGATGGCATaGGGGGTTATTAGCTCGCTC +
Preference number: 4 (lower is better)
Translates to: FCPCPKRVSLCSHHQSYRCTLMA*GVISSL
Trigger: GAGCGAGCTAATAACCCCTCATGCCATCAGAGTACA...CCTATAGCTCTGATGGTGGCTACACAAACTGACCCTCTTGGGACAAGGACAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR TCA 90 bp ATACAACATTTCATCATTCAATTCAGGTTGCGTTTTAAGAAAGTCTTCCGTGCTCGCGCGCGGGCCCCATaGATGGGTTACTACGGCCCT +
Preference number: 4 (lower is better)
Translates to: IQHFIIQFRLRFKKVFRARARAP*MGYYGP
Trigger: AGGGCCGTAGTAACCCATTCATGGGGCCCGCGCGCG...AGCACGGAAGACTTTCTTAAAACGCAACCTGAATTGAATGATGAAATGTTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS-3UTR TCA 90 bp AGCTATAGGAGGACGTGGGACCAAGTAAGATGCTGGCTCCTTGCAGACCCAAGGCTCAGGGGAGAACGTTaGAAGCTAATAATAGGAATT +
Preference number: 4 (lower is better)
Translates to: SYRRTWDQVRCWLLADPRLRGER*KLIIGI
Trigger: AATTCCTATTATTAGCTTTCAACGTTCTCCCCTGAG...CCTTGGGTCTGCAAGGAGCCAGCATCTTACTTGGTCCCACGTCCTCCTATAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS-3UTR GCA 90 bp CTTAGCACTGACTACGTCAATGACATCTTTTGTCCTTGTCCCAAGAGGGTCAGTCTACACATCACTTCGTaGGTCAGGAGAACTCGGCAC +
Preference number: 4 (lower is better)
Translates to: LSTDYVNDIFCPCPKRVSLHITS*VRRTRH
Trigger: GTGCCGAGTTCTCCTGACGCACGAAGTGATGTGTAG...ACTGACCCTCTTGGGACAAGGACAAAAGATGTCATTGACGTAGTCAGTGCTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR GCA 90 bp ATGGAGGATGTGCTGGAAGACCCAACGGTGGGACTTGATGACATGAACAGGCCAGGTTATTGTGTGGTGTaGCATAAAGAGCTTCCACTA +
Preference number: 4 (lower is better)
Translates to: MEDVLEDPTVGLDDMNRPGYCVV*HKELPL
Trigger: TAGTGGAAGCTCTTTATGGCACACCACACAATAACC...TGGCCTGTTCATGTCATCAAGTCCCACCGTTGGGTCTTCCAGCACATCCTCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535548.1
CDS-3UTR GCA 90 bp CTTAGCACTGACTACGTCAATGACATCTTTTGTCCTTGTCCCAAGAGGGTCAGTTGGGACCAAGTAAGATaGTGGCTCCTTGCAGACCCA +
Preference number: 4 (lower is better)
Translates to: LSTDYVNDIFCPCPKRVSWDQVR*WLLADP
Trigger: TGGGTCTGCAAGGAGCCAGCATCTTACTTGGTCCCA...ACTGACCCTCTTGGGACAAGGACAAAAGATGTCATTGACGTAGTCAGTGCTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR GCA 90 bp CTTAGCACTGACTACGTCAATGACATCTTTTGTCCTTGTCCCAAGAGGGTCAGTTCCTTCCAGCTGCAGTaGTGCCTCCTGAAAGTGATC +
Preference number: 4 (lower is better)
Translates to: LSTDYVNDIFCPCPKRVSSFQLQ*CLLKVI
Trigger: GATCACTTTCAGGAGGCAGCACTGCAGCTGGAAGGA...ACTGACCCTCTTGGGACAAGGACAAAAGATGTCATTGACGTAGTCAGTGCTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS-3UTR GCA 90 bp ATACAACATTTCATCATTCAATTCAGGTTGCGTTTTAAGAAAGTCTTCCGTGCTAGGGCGACCCCGCTCTaGGCGGCGACATTAGCGTCC +
Preference number: 4 (lower is better)
Translates to: IQHFIIQFRLRFKKVFRARATPL*AATLAS
Trigger: GGACGCTAATGTCGCCGCGCAGAGCGGGGTCGCCCT...AGCACGGAAGACTTTCTTAAAACGCAACCTGAATTGAATGATGAAATGTTGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS-3UTR CCA 90 bp TGTAGCCACCATCAGAGCTATAGGAGGACGTGGGACCAAGTAAGATGCTGGCTCCTCTCCGTCCATGCTTaGAGTTGTTATGAACAAACA +
Preference number: 4 (lower is better)
Translates to: CSHHQSYRRTWDQVRCWLLSVHA*SCYEQT
Trigger: TGTTTGTTCATAACAACTCCAAGCATGGACGGAGAG...GAGCCAGCATCTTACTTGGTCCCACGTCCTCCTATAGCTCTGATGGTGGCTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR CCA 90 bp CTGAAGAGGAAAATGGGAGGATGGAGGATGTGCTGGAAGACCCAACGGTGGGACAGCCATAGTCTATGGTaGGTTCATTTAATGCTGTGT +
Preference number: 4 (lower is better)
Translates to: LKRKMGGWRMCWKTQRWDSHSLW*VHLMLC
Trigger: ACACAGCATTAAATGAACCCACCATAGACTATGGCT...GTCCCACCGTTGGGTCTTCCAGCACATCCTCCATCCTCCCATTTTCCTCTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000535548.1
CDS-3UTR CCA 90 bp AGAGGGTCAGTTTGTGTAGCCACCATCAGAGCTATAGGAGGACGTGGGACCAAGGGAAGCCATAGTCTATaGTGGGTTCATTTAATGCTG +
Preference number: 4 (lower is better)
Translates to: RGSVCVATIRAIGGRGTKGSHSL*WVHLML
Trigger: CAGCATTAAATGAACCCACCATAGACTATGGCTTCC...CTTGGTCCCACGTCCTCCTATAGCTCTGATGGTGGCTACACAAACTGACCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR CCA 90 bp CTGAAGAGGAAAATGGGAGGATGGAGGATGTGCTGGAAGACCCAACGGTGGGACTTCAAAATGATGTCCTaGTTATTGTGTGGTGTGCCA +
Preference number: 4 (lower is better)
Translates to: LKRKMGGWRMCWKTQRWDFKMMS*LLCGVP
Trigger: TGGCACACCACACAATAACCAGGACATCATTTTGAA...GTCCCACCGTTGGGTCTTCCAGCACATCCTCCATCCTCCCATTTTCCTCTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535548.1
CDS-3UTR CCA 90 bp GACAGGGAGAGGAAAGGACTTGGATGTTCTAAGACTGACTCTAAAGAGTCCATCCACCCAAGTTGGCCATaGGGACATTGCTGTAGCCAT +
Preference number: 4 (lower is better)
Translates to: DRERKGLGCSKTDSKESIHPSWP*GHCCSH
Trigger: ATGGCTACAGCAATGTCCCCATGGCCAACTTGGGTG...GATGGACTCTTTAGAGTCAGTCTTAGAACATCCAAGTCCTTTCCTCTCCCTGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS-3UTR CCA 90 bp CTCTTAGCACTGACTACGTCAATGACATCTTTTGTCCTTGTCCCAAGAGGGTCACTGGAACACCCAAGTTaGCCATGGGGACATTGCTGT +
Preference number: 4 (lower is better)
Translates to: LLALTTSMTSFVLVPRGSLEHPS*PWGHCC
Trigger: ACAGCAATGTCCCCATGGCCAACTTGGGTGTTCCAG...TGACCCTCTTGGGACAAGGACAAAAGATGTCATTGACGTAGTCAGTGCTAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR CCA 90 bp GGACCAAGTAAGATGCTGGCTCCTTGCAGACCCAAGGGTGTCCATCATGTTCATAGACAGACTCAAACATaGGAATTCTCTGGACTGCTC +
Preference number: 4 (lower is better)
Translates to: GPSKMLAPCRPKGVHHVHRQTQT*EFSGLL
Trigger: GAGCAGTCCAGAGAATTCCCATGTTTGAGTCTGTCT...ATGAACATGATGGACACCCTTGGGTCTGCAAGGAGCCAGCATCTTACTTGGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520164.6
3UTR CAA 72 bp AATGACATCTTTTGTCCTTGTCCCAAGAGGGTCAGTTaGTGTAGCCACCATCAGAGCTATAGGAGGACGTGG +
Preference number: 4 (lower is better)
Translates to: NDIFCPCPKRVS*CSHHQSYRRTW
Trigger: CCACGTCCTCCTATAGCTCTGATGGTGGCTACACAAACTGACCCTCTTGGGACAAGGACAAAAGATGTCATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
3UTR CAA 72 bp ATGCCCCTAATCTCTGGATCTCCCAAGAATCTGGTCTaGCCTTTCTTCGAACATCAGAAGAGGGGATTAGGG +
Preference number: 4 (lower is better)
Translates to: MPLISGSPKNLV*PFFEHQKRGLG
Trigger: CCCTAATCCCCTCTTCTGATGTTCGAAGAAAGGCAAGACCAGATTCTTGGGAGATCCAGAGATTAGGGGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS-3UTR TCA 90 bp TTTGTCCTTGTCCCAAGAGGGTCAGTTTGTGTAGCCACCATCAGAGCTATAGGACACATTCACCGTTGTTaGCAACACAACCTGAAACCG +
Preference number: 4 (lower is better)
Translates to: FVLVPRGSVCVATIRAIGHIHRC*QHNLKP
Trigger: CGGTTTCAGGTTGTGTTGTCAACAACGGTGAATGTG...TCCTATAGCTCTGATGGTGGCTACACAAACTGACCCTCTTGGGACAAGGACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR TCA 90 bp TTAGCACTGACTACGTCAATGACATCTTTTGTCCTTGTCCCAAGAGGGTCAGTTGGGATGCTGAAAGCCTaGGACAGACTCAAACATGGG +
Preference number: 4 (lower is better)
Translates to: LALTTSMTSFVLVPRGSVGMLKA*DRLKHG
Trigger: CCCATGTTTGAGTCTGTCTCAGGCTTTCAGCATCCC...AACTGACCCTCTTGGGACAAGGACAAAAGATGTCATTGACGTAGTCAGTGCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS-3UTR TCA 90 bp GCTCTGCCTTCACTTTTGGAAGGTAACATTCATATTCCACACATTCTTCCCCTTGGCTCTGCTAGAAGGTaGGGTGCTTCTTTCCTTGGG +
Preference number: 4 (lower is better)
Translates to: ALPSLLEGNIHIPHILPLGSARR*GASFLG
Trigger: CCCAAGGAAAGAAGCACCTCACCTTCTAGCAGAGCC...AAGGGGAAGAATGTGTGGAATATGAATGTTACCTTCCAAAAGTGAAGGCAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS-3UTR GCA 90 bp ACATCTTTTGTCCTTGTCCCAAGAGGGTCAGTTTGTGTAGCCACCATCAGAGCTTGTTGGTCTTCTCGTTaGCTTGTTCCAAAGCTGCCT +
Preference number: 4 (lower is better)
Translates to: TSFVLVPRGSVCVATIRACWSSR*LVPKLP
Trigger: AGGCAGCTTTGGAACAAGGCAACGAGAAGACCAACA...AGCTCTGATGGTGGCTACACAAACTGACCCTCTTGGGACAAGGACAAAAGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408929.7
CDS-3UTR GCA 90 bp ACATCTTTTGTCCTTGTCCCAAGAGGGTCAGTTTGTGTAGCCACCATCAGAGCTGAGGAAATTGATGGCTaGCTAATCTCTCCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: TSFVLVPRGSVCVATIRAEEIDG*LISPLP
Trigger: AGGAAGGGGAGAGATTAGGCAGCCATCAATTTCCTC...AGCTCTGATGGTGGCTACACAAACTGACCCTCTTGGGACAAGGACAAAAGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS-3UTR CCA 90 bp CTCTTAGCACTGACTACGTCAATGACATCTTTTGTCCTTGTCCCAAGAGGGTCAAAGGGACTTGTCATTTaGAAAGGCAGCATTCGGGCC +
Preference number: 4 (lower is better)
Translates to: LLALTTSMTSFVLVPRGSKGLVI*KGSIRA
Trigger: GGCCCGAATGCTGCCTTTCCAAATGACAAGTCCCTT...TGACCCTCTTGGGACAAGGACAAAAGATGTCATTGACGTAGTCAGTGCTAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408929.7
CDS-3UTR CCA 90 bp TGTAGCCACCATCAGAGCTATAGGAGGACGTGGGACCAAGTAAGATGCTGGCTCAGCCATAGTCTATGGTaGGTTCATTTAATGCTGTGT +
Preference number: 4 (lower is better)
Translates to: CSHHQSYRRTWDQVRCWLSHSLW*VHLMLC
Trigger: ACACAGCATTAAATGAACCCACCATAGACTATGGCT...GAGCCAGCATCTTACTTGGTCCCACGTCCTCCTATAGCTCTGATGGTGGCTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR CCA 90 bp TTCTGCATTAGGGTGTTCTGTGGGAATCTACATGTTCTTGCCCTTGGGTCAATAGACCAAGTAAGATGCTaGCTCCTTGCAGACCCAAGG +
Preference number: 4 (lower is better)
Translates to: FCIRVFCGNLHVLALGSIDQVRC*LLADPR
Trigger: CCTTGGGTCTGCAAGGAGCCAGCATCTTACTTGGTC...TATTGACCCAAGGGCAAGAACATGTAGATTCCCACAGAACACCCTAATGCAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS-3UTR TCA 90 bp GCTGCCAGGGTTCTAGCTGAATGGTCAAGATGTCTGGTATTTAGTTACACGCATCGGCTCGCTTCAAAATaGTGTCCTGGTTATTGTGTG +
Preference number: 4 (lower is better)
Translates to: AARVLAEWSRCLVFSYTHRLASK*CPGYCV
Trigger: CACACAATAACCAGGACATCATTTTGAAGCGAGCCG...ATGCGTGTAACTAAATACCAGACATCTTGACCATTCAGCTAGAACCCTGGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS-3UTR TCA 90 bp CTTAGCACTGACTACGTCAATGACATCTTTTGTCCTTGTCCCAAGAGGGTCAGTCTAGTCACAAAACGATaGAGAGCCCATCAAAGGGCT +
Preference number: 4 (lower is better)
Translates to: LSTDYVNDIFCPCPKRVSLVTKR*RAHQRA
Trigger: AGCCCTTTGATGGGCTCTTCATCGTTTTGTGACTAG...ACTGACCCTCTTGGGACAAGGACAAAAGATGTCATTGACGTAGTCAGTGCTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS-3UTR TCA 90 bp TTCTGCATTAGGGTGTTCTGTGGGAATCTACATGTTCTTGCCCTTGGGTCAATATGCCAGGGTTCTAGCTaGATGGTCAAGATGTCTGGT +
Preference number: 4 (lower is better)
Translates to: FCIRVFCGNLHVLALGSICQGSS*MVKMSG
Trigger: ACCAGACATCTTGACCATTCAGCTAGAACCCTGGCA...TATTGACCCAAGGGCAAGAACATGTAGATTCCCACAGAACACCCTAATGCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS-3UTR CCA 90 bp TATCTTCTCCAAACCGTGTTGCTGAAGTTCTATGGGGCTGTGTACCTCTGTACTAGTGAGTGCCGTTGTTaGTCTTCTCGTTGCCTTGTT +
Preference number: 4 (lower is better)
Translates to: YLLQTVLLKFYGAVYLCTSECRC*SSRCLV
Trigger: AACAAGGCAACGAGAAGACCAACAACGGCACTCACT...AGTACAGAGGTACACAGCCCCATAGAACTTCAGCAACACGGTTTGGAGAAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS-3UTR CCA 90 bp GCTGCCAGGGTTCTAGCTGAATGGTCAAGATGTCTGGTATTTAGTTACACGCATGATGCCCCTAATCTCTaGATCTCCCAAGAATCTGGT +
Preference number: 4 (lower is better)
Translates to: AARVLAEWSRCLVFSYTHDAPNL*ISQESG
Trigger: ACCAGATTCTTGGGAGATCCAGAGATTAGGGGCATC...ATGCGTGTAACTAAATACCAGACATCTTGACCATTCAGCTAGAACCCTGGCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS-3UTR CCA 90 bp GTAAGATGCTGGCTCCTTGCAGACCCAAGGGTGTCCATCATGTTCATGTGGGGGAGGTTTCTAAAACCTTaGATTCTCATGTGCATAGAA +
Preference number: 4 (lower is better)
Translates to: VRCWLLADPRVSIMFMWGRFLKP*ILMCIE
Trigger: TTCTATGCACATGAGAATCCAAGGTTTTAGAAACCT...CCCCCACATGAACATGATGGACACCCTTGGGTCTGCAAGGAGCCAGCATCTTAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS-3UTR TCA 90 bp GACTACGTCAATGACATCTTTTGTCCTTGTCCCAAGAGGGTCAGTTTGTGTAGCAGAATCTGTCAATTATaGCTGGGTCCGATGGAGTCT +
Preference number: 4 (lower is better)
Translates to: DYVNDIFCPCPKRVSLCSRICQL*LGPMES
Trigger: AGACTCCATCGGACCCAGTCATAATTGACAGATTCT...GCTACACAAACTGACCCTCTTGGGACAAGGACAAAAGATGTCATTGACGTAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR GCA 90 bp CTCTTAGCACTGACTACGTCAATGACATCTTTTGTCCTTGTCCCAAGAGGGTCAGTAACTTGTAGTGAGTaGCGTTGTTGGTCTTCTCGT +
Preference number: 4 (lower is better)
Translates to: LLALTTSMTSFVLVPRGSVTCSE*RCWSSR
Trigger: ACGAGAAGACCAACAACGGCACTCACTACAAGTTAC...TGACCCTCTTGGGACAAGGACAAAAGATGTCATTGACGTAGTCAGTGCTAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR GCA 90 bp TCTTTTGTCCTTGTCCCAAGAGGGTCAGTTTGTGTAGCCACCATCAGAGCTATAGTAACTTGTAGTGAGTaGCGTTGTTGGTCTTCTCGT +
Preference number: 4 (lower is better)
Translates to: SFVLVPRGSVCVATIRAIVTCSE*RCWSSR
Trigger: ACGAGAAGACCAACAACGGCACTCACTACAAGTTAC...TATAGCTCTGATGGTGGCTACACAAACTGACCCTCTTGGGACAAGGACAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR GCA 90 bp CTCTTAGCACTGACTACGTCAATGACATCTTTTGTCCTTGTCCCAAGAGGGTCAAGCTTCAGCAATGTCTaGGGCTCGCTTCAAAATGAT +
Preference number: 4 (lower is better)
Translates to: LLALTTSMTSFVLVPRGSSFSNV*GSLQND
Trigger: ATCATTTTGAAGCGAGCCGCAGACATTGCTGAAGCT...TGACCCTCTTGGGACAAGGACAAAAGATGTCATTGACGTAGTCAGTGCTAAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR GCA 90 bp GGACCAAGTAAGATGCTGGCTCCTTGCAGACCCAAGGGTGTCCATCATGTTCATTGCTTAATTTTGCTCTaGCTTCACTTTTGGAAGGTA +
Preference number: 4 (lower is better)
Translates to: GPSKMLAPCRPKGVHHVHCLILL*LHFWKV
Trigger: TACCTTCCAAAAGTGAAGGCAGAGCAAAATTAAGCA...ATGAACATGATGGACACCCTTGGGTCTGCAAGGAGCCAGCATCTTACTTGGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS-3UTR CCA 90 bp TTAGCACTGACTACGTCAATGACATCTTTTGTCCTTGTCCCAAGAGGGTCAGTTCCGTCTCATGTCCCTTaGGTTTCCTGCTGTTTTCAA +
Preference number: 4 (lower is better)
Translates to: LALTTSMTSFVLVPRGSVPSHVP*VSCCFQ
Trigger: TTGAAAACAGCAGGAAACCCAAGGGACATGAGACGG...AACTGACCCTCTTGGGACAAGGACAAAAGATGTCATTGACGTAGTCAGTGCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
3UTR CAA 72 bp GAGTCCATCAAACAGAGTTATCTTCTCCAAACCGTGTaGCTGAAGTTCTATGGGGCTGTGTACCTCTGTACT +
Preference number: 4 (lower is better)
Translates to: ESIKQSYLLQTV*LKFYGAVYLCT
Trigger: AGTACAGAGGTACACAGCCCCATAGAACTTCAGCAACACGGTTTGGAGAAGATAACTCTGTTTGATGGACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS-3UTR TCA 90 bp TTCTGCATTAGGGTGTTCTGTGGGAATCTACATGTTCTTGCCCTTGGGTCAATATTAATGCTGTGTAAATaGACCTTCCTGGGGCTCCTT +
Preference number: 4 (lower is better)
Translates to: FCIRVFCGNLHVLALGSILMLCK*TFLGLL
Trigger: AAGGAGCCCCAGGAAGGTTCATTTACACAGCATTAA...TATTGACCCAAGGGCAAGAACATGTAGATTCCCACAGAACACCCTAATGCAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS-3UTR TCA 90 bp CAAACAGAGTTATCTTCTCCAAACCGTGTTGCTGAAGTTCTATGGGGCTGTGTAATTCCGTCTCATTCTTaGCTAGAAACTGTCGAGTGG +
Preference number: 4 (lower is better)
Translates to: QTELSSPNRVAEVLWGCVIPSHS*LETVEW
Trigger: CCACTCGACAGTTTCTAGTCAAGAATGAGACGGAAT...TACACAGCCCCATAGAACTTCAGCAACACGGTTTGGAGAAGATAACTCTGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS-3UTR TCA 90 bp TCTTTTGTCCTTGTCCCAAGAGGGTCAGTTTGTGTAGCCACCATCAGAGCTATACAACGTGGAAACAAGTaGCATCTTTATTGGCAATCC +
Preference number: 4 (lower is better)
Translates to: SFVLVPRGSVCVATIRAIQRGNK*HLYWQS
Trigger: GGATTGCCAATAAAGATGTCACTTGTTTCCACGTTG...TATAGCTCTGATGGTGGCTACACAAACTGACCCTCTTGGGACAAGGACAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS-3UTR TCA 90 bp AGACTGACTCTAAAGAGTCCATCAAACAGAGTTATCTTCTCCAAACCGTGTTGCCTATTGTGGTGCTCATaGGTCAATAAGGAGAACCCC +
Preference number: 4 (lower is better)
Translates to: RLTLKSPSNRVIFSKPCCLLWCS*VNKENP
Trigger: GGGGTTCTCCTTATTGACTCATGAGCACCACAATAG...GCAACACGGTTTGGAGAAGATAACTCTGTTTGATGGACTCTTTAGAGTCAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS-3UTR GCA 90 bp GACTACGTCAATGACATCTTTTGTCCTTGTCCCAAGAGGGTCAGTTTGTGTAGCGGTTATTGTGTGGTGTaGCATAAAGAGCTTCCACTA +
Preference number: 4 (lower is better)
Translates to: DYVNDIFCPCPKRVSLCSGYCVV*HKELPL
Trigger: TAGTGGAAGCTCTTTATGGCACACCACACAATAACC...GCTACACAAACTGACCCTCTTGGGACAAGGACAAAAGATGTCATTGACGTAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR GCA 90 bp TCTTTTGTCCTTGTCCCAAGAGGGTCAGTTTGTGTAGCCACCATCAGAGCTATAAGATGCTGCTTGTGTTaGGGATGTACCCTTGATTAT +
Preference number: 4 (lower is better)
Translates to: SFVLVPRGSVCVATIRAIRCCLC*GCTLDY
Trigger: ATAATCAAGGGTACATCCGCAACACAAGCAGCATCT...TATAGCTCTGATGGTGGCTACACAAACTGACCCTCTTGGGACAAGGACAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR GCA 90 bp GCTCTTAGCACTGACTACGTCAATGACATCTTTTGTCCTTGTCCCAAGAGGGTCTGTTGGTCTTCTCGTTaGCTTGTTCTTTGTCATTCT +
Preference number: 4 (lower is better)
Translates to: ALSTDYVNDIFCPCPKRVCWSSR*LVLCHS
Trigger: AGAATGACAAAGAACAAGGCAACGAGAAGACCAACA...GACCCTCTTGGGACAAGGACAAAAGATGTCATTGACGTAGTCAGTGCTAAGAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS-3UTR GCA 90 bp CTCTTAGCACTGACTACGTCAATGACATCTTTTGTCCTTGTCCCAAGAGGGTCATTGGCAATCCCAATATaGCTGGATATGTCTCTAGGA +
Preference number: 4 (lower is better)
Translates to: LLALTTSMTSFVLVPRGSLAIPI*LDMSLG
Trigger: TCCTAGAGACATATCCAGGCATATTGGGATTGCCAA...TGACCCTCTTGGGACAAGGACAAAAGATGTCATTGACGTAGTCAGTGCTAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS-3UTR CCA 90 bp TTAGCACTGACTACGTCAATGACATCTTTTGTCCTTGTCCCAAGAGGGTCAGTTGTCCCAAACACCACTTaGAGACCATCAAAGAAGTTG +
Preference number: 4 (lower is better)
Translates to: LALTTSMTSFVLVPRGSVVPNTT*RPSKKL
Trigger: CAACTTCTTTGATGGTCTCCAAGTGGTGTTTGGGAC...AACTGACCCTCTTGGGACAAGGACAAAAGATGTCATTGACGTAGTCAGTGCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR CCA 90 bp AGGCAAGGTTCTTCCCCTCTAAGAGCTAGTCACAAAACGATGAAGAGCCCATCAAGCCATAGTCTATGGTaGGTTCATTTAATGCTGTGT +
Preference number: 4 (lower is better)
Translates to: RQGSSPLRASHKTMKSPSSHSLW*VHLMLC
Trigger: ACACAGCATTAAATGAACCCACCATAGACTATGGCT...TGATGGGCTCTTCATCGTTTTGTGACTAGCTCTTAGAGGGGAAGAACCTTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS-3UTR CCA 90 bp TTCTGCATTAGGGTGTTCTGTGGGAATCTACATGTTCTTGCCCTTGGGTCAATAGTCCTGGTTATTGTGTaGTGTGCCATAAAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: FCIRVFCGNLHVLALGSIVLVIV*CAIKSF
Trigger: GAAGCTCTTTATGGCACACCACACAATAACCAGGAC...TATTGACCCAAGGGCAAGAACATGTAGATTCCCACAGAACACCCTAATGCAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS-3UTR CCA 90 bp TTTTGTCCTTGTCCCAAGAGGGTCAGTTTGTGTAGCCACCATCAGAGCTATAGGTTCAAAATGATGTCCTaGTTATTGTGTGGTGTGCCA +
Preference number: 4 (lower is better)
Translates to: FCPCPKRVSLCSHHQSYRFKMMS*LLCGVP
Trigger: TGGCACACCACACAATAACCAGGACATCATTTTGAA...CCTATAGCTCTGATGGTGGCTACACAAACTGACCCTCTTGGGACAAGGACAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR CCA 90 bp CTCTTAGCACTGACTACGTCAATGACATCTTTTGTCCTTGTCCCAAGAGGGTCAGATGTAGTCAAAGTTTaGGTTCTTATCCTCCGCAAG +
Preference number: 4 (lower is better)
Translates to: LLALTTSMTSFVLVPRGSDVVKV*VLILRK
Trigger: CTTGCGGAGGATAAGAACCCAAACTTTGACTACATC...TGACCCTCTTGGGACAAGGACAAAAGATGTCATTGACGTAGTCAGTGCTAAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS-3UTR CCA 90 bp GACTACGTCAATGACATCTTTTGTCCTTGTCCCAAGAGGGTCAGTTTGTGTAGCAGGAGAACCCCAACGTaGAAACAAGTGACATCTTTA +
Preference number: 4 (lower is better)
Translates to: DYVNDIFCPCPKRVSLCSRRTPT*KQVTSL
Trigger: TAAAGATGTCACTTGTTTCCACGTTGGGGTTCTCCT...GCTACACAAACTGACCCTCTTGGGACAAGGACAAAAGATGTCATTGACGTAGTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520164.6
3UTR CAA 72 bp AGGAGAACCCCAACGTGGAAACAAGTGACATCTTTATaGGCAATCCCAATATGCCTGGATATGTCTCTAGGA +
Preference number: 4 (lower is better)
Translates to: RRTPTWKQVTSL*AIPICLDMSLG
Trigger: TCCTAGAGACATATCCAGGCATATTGGGATTGCCAATAAAGATGTCACTTGTTTCCACGTTGGGGTTCTCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS-3UTR TCA 90 bp AACATTTCATCATTCAATTCAGGTTGCGTTTTAAGAAAGTCTTCCGTGCTGGTATGGCGAGGTGCGGACTaGTGTAGTCAAAGTTTGGGT +
Preference number: 4 (lower is better)
Translates to: NISSFNSGCVLRKSSVLVWRGAD*CSQSLG
Trigger: ACCCAAACTTTGACTACATCAGTCCGCACCTCGCCA...TACCAGCACGGAAGACTTTCTTAAAACGCAACCTGAATTGAATGATGAAATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS-3UTR TCA 90 bp GCTCTGCCTTCACTTTTGGAAGGTAACATTCATATTCCACACATTCTTCCCCTTGCTCAGATGCACTCATaGTGTTTTTCCATGAGTGCT +
Preference number: 4 (lower is better)
Translates to: ALPSLLEGNIHIPHILPLAQMHS*CFSMSA
Trigger: AGCACTCATGGAAAAACATCATGAGTGCATCTGAGC...AAGGGGAAGAATGTGTGGAATATGAATGTTACCTTCCAAAAGTGAAGGCAGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS-3UTR GCA 90 bp TTAGCACTGACTACGTCAATGACATCTTTTGTCCTTGTCCCAAGAGGGTCAGTTAGATGCTGCTTGTGTTaGGGATGTACCCTTGATTAT +
Preference number: 4 (lower is better)
Translates to: LALTTSMTSFVLVPRGSVRCCLC*GCTLDY
Trigger: ATAATCAAGGGTACATCCGCAACACAAGCAGCATCT...AACTGACCCTCTTGGGACAAGGACAAAAGATGTCATTGACGTAGTCAGTGCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR CCA 90 bp CTCTTAGCACTGACTACGTCAATGACATCTTTTGTCCTTGTCCCAAGAGGGTCACGAAGTGAAAGAAGTTaGATTTCCTCAAGTTGGAAG +
Preference number: 4 (lower is better)
Translates to: LLALTTSMTSFVLVPRGSRSERS*ISSSWK
Trigger: CTTCCAACTTGAGGAAATCCAACTTCTTTCACTTCG...TGACCCTCTTGGGACAAGGACAAAAGATGTCATTGACGTAGTCAGTGCTAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS-3UTR CCA 90 bp ACATCTTTTGTCCTTGTCCCAAGAGGGTCAGTTTGTGTAGCCACCATCAGAGCTAAAATTTCCTTATGTTaGATTGGCTCAAATCCAGGG +
Preference number: 4 (lower is better)
Translates to: TSFVLVPRGSVCVATIRAKISLC*IGSNPG
Trigger: CCCTGGATTTGAGCCAATCCAACATAAGGAAATTTT...AGCTCTGATGGTGGCTACACAAACTGACCCTCTTGGGACAAGGACAAAAGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS-3UTR CCA 90 bp ATACAACATTTCATCATTCAATTCAGGTTGCGTTTTAAGAAAGTCTTCCGTGCTGGGGGTAGCTTCCGATaGATCGAGTCTTCTTGCTCT +
Preference number: 4 (lower is better)
Translates to: IQHFIIQFRLRFKKVFRAGGSFR*IESSCS
Trigger: AGAGCAAGAAGACTCGATCCATCGGAAGCTACCCCC...AGCACGGAAGACTTTCTTAAAACGCAACCTGAATTGAATGATGAAATGTTGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS-3UTR CCA 90 bp AACATTTCATCATTCAATTCAGGTTGCGTTTTAAGAAAGTCTTCCGTGCTGGTAAGCCCATCAAAGGGCTaGGTAACTGTGCTGCATAGA +
Preference number: 4 (lower is better)
Translates to: NISSFNSGCVLRKSSVLVSPSKG*VTVLHR
Trigger: TCTATGCAGCACAGTTACCCAGCCCTTTGATGGGCT...TACCAGCACGGAAGACTTTCTTAAAACGCAACCTGAATTGAATGATGAAATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS-3UTR CCA 90 bp CTCTTAGCACTGACTACGTCAATGACATCTTTTGTCCTTGTCCCAAGAGGGTCACTCTGCCTTCACTTTTaGAAGGTAACATTCATATTC +
Preference number: 4 (lower is better)
Translates to: LLALTTSMTSFVLVPRGSLCLHF*KVTFIF
Trigger: GAATATGAATGTTACCTTCCAAAAGTGAAGGCAGAG...TGACCCTCTTGGGACAAGGACAAAAGATGTCATTGACGTAGTCAGTGCTAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS-3UTR CCA 90 bp TTCTGCATTAGGGTGTTCTGTGGGAATCTACATGTTCTTGCCCTTGGGTCAATACTAGAAACTGTCGAGTaGCATAGCTATGTTTTTCAA +
Preference number: 4 (lower is better)
Translates to: FCIRVFCGNLHVLALGSILETVE*HSYVFQ
Trigger: TTGAAAAACATAGCTATGCCACTCGACAGTTTCTAG...TATTGACCCAAGGGCAAGAACATGTAGATTCCCACAGAACACCCTAATGCAGAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS-3UTR TCA 90 bp ATACAACATTTCATCATTCAATTCAGGTTGCGTTTTAAGAAAGTCTTCCGTGCTAGACGGAGCTGGGAATaGATTGATGGGTTGGAGTAT +
Preference number: 4 (lower is better)
Translates to: IQHFIIQFRLRFKKVFRARRSWE*IDGLEY
Trigger: ATACTCCAACCCATCAATTCATTCCCAGCTCCGTCT...AGCACGGAAGACTTTCTTAAAACGCAACCTGAATTGAATGATGAAATGTTGTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS-3UTR CCA 90 bp TTCTGCATTAGGGTGTTCTGTGGGAATCTACATGTTCTTGCCCTTGGGTCAATAAATGGTCAAGATGTCTaGTATTTAGTTACACGCATT +
Preference number: 4 (lower is better)
Translates to: FCIRVFCGNLHVLALGSINGQDV*YLVTRI
Trigger: AATGCGTGTAACTAAATACCAGACATCTTGACCATT...TATTGACCCAAGGGCAAGAACATGTAGATTCCCACAGAACACCCTAATGCAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS-3UTR GCA 90 bp AACATTTCATCATTCAATTCAGGTTGCGTTTTAAGAAAGTCTTCCGTGCTGGTAAGAAAAGGGATCAAGTaGCCAAGTTTGAGTCTTAGA +
Preference number: 4 (lower is better)
Translates to: NISSFNSGCVLRKSSVLVRKGIK*PSLSLR
Trigger: TCTAAGACTCAAACTTGGGCACTTGATCCCTTTTCT...TACCAGCACGGAAGACTTTCTTAAAACGCAACCTGAATTGAATGATGAAATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS-3UTR CCA 90 bp AACATTTCATCATTCAATTCAGGTTGCGTTTTAAGAAAGTCTTCCGTGCTGGTATTCCTTATGTTGGATTaGCTCAAATCCAGGGCTAAA +
Preference number: 4 (lower is better)
Translates to: NISSFNSGCVLRKSSVLVFLMLD*LKSRAK
Trigger: TTTAGCCCTGGATTTGAGCCAATCCAACATAAGGAA...TACCAGCACGGAAGACTTTCTTAAAACGCAACCTGAATTGAATGATGAAATGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520164.6
3UTR CAA 72 bp TTCGGTGTAAAGCTACCAAGAAATTCTACAATCATTTaGAAGACAGTACTGCACTCATCTTCATGCAAAAGG +
Preference number: 4 (lower is better)
Translates to: FGVKLPRNSTII*KTVLHSSSCKR
Trigger: CCTTTTGCATGAAGATGAGTGCAGTACTGTCTTCAAAATGATTGTAGAATTTCTTGGTAGCTTTACACCGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS-3UTR CCA 90 bp ATACAACATTTCATCATTCAATTCAGGTTGCGTTTTAAGAAAGTCTTCCGTGCTAATGAATTGATGGGTTaGAGTATTTGTGCATGTGCT +
Preference number: 4 (lower is better)
Translates to: IQHFIIQFRLRFKKVFRANELMG*SICACA
Trigger: AGCACATGCACAAATACTCCAACCCATCAATTCATT...AGCACGGAAGACTTTCTTAAAACGCAACCTGAATTGAATGATGAAATGTTGTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS CCA 90 bp TCAGTTGTAAAAAGAAGGGGAAGACCTGGAGCCGAGAGGAGGCGGTaGCTGCGAGCGCCACGGAGCCCGGCTGCAGCCGCGCGCGGGCCC +
Preference number: 5 (lower is better)
Translates to: SVVKRRGRPGAERRR*LRAPRSPAAAARGP
Trigger: GGGCCCGCGCGCGGCTGCAGCCGGGCTCCGTGGCGCTCGCAGCCACCGCCTCCTCTCGGCTCCAGGTCTTCCCCTTCTTTTTACAACTGA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS GCA 90 bp ACTTGTCATTTGGAAAGGCAGCATTCGGGCCTATCCCGCGAGGACTaGGCACGCAGGGCCACGAGCTCAGGGACTGAGTTCCAGGTTCAG +
Preference number: 5 (lower is better)
Translates to: TCHLERQHSGLSRED*ARRATSSGTEFQVQ
Trigger: CTGAACCTGGAACTCAGTCCCTGAGCTCGTGGCCCTGCGTGCGCAGTCCTCGCGGGATAGGCCCGAATGCTGCCTTTCCAAATGACAAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408929.7
CDS CCA 90 bp AGCCCCAAGGCTTCCCTTGGCAGAAAAGTGAAGGGACTTGTCATTTaGAAAGGCAGCATTCGGGCCTATCCCGCGAGGACTGCGCACGCA +
Preference number: 5 (lower is better)
Translates to: SPKASLGRKVKGLVI*KGSIRAYPARTAHA
Trigger: TGCGTGCGCAGTCCTCGCGGGATAGGCCCGAATGCTGCCTTTCCAAATGACAAGTCCCTTCACTTTTCTGCCAAGGGAAGCCTTGGGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408929.7
CDS-3UTR CAA 90 bp AGGAGGACGTGGGACCAAGTAAGATGCTGGCTCCTTGCAGACCCAAGGGTGTCCCTGAATCCATTTCCATaGCCGCTGGAGCAGGCAGGT +
Preference number: 5 (lower is better)
Translates to: RRTWDQVRCWLLADPRVSLNPFP*PLEQAG
Trigger: ACCTGCCTGCTCCAGCGGCAATGGAAATGGATTCAG...GGACACCCTTGGGTCTGCAAGGAGCCAGCATCTTACTTGGTCCCACGTCCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR CAA 90 bp GCAGACCCAAGGGTGTCCATCATGTTCATGTGGGGGCACCACTACACCCCCAAAGCGGAGAGATGCTGCTaGTGTTGCGGATGTACCCTT +
Preference number: 5 (lower is better)
Translates to: ADPRVSIMFMWGHHYTPKAERCC*CCGCTL
Trigger: AAGGGTACATCCGCAACACAAGCAGCATCTCTCCGC...TTTGGGGGTGTAGTGGTGCCCCCACATGAACATGATGGACACCCTTGGGTCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR CAA 90 bp AGGACGTGGGACCAAGTAAGATGCTGGCTCCTTGCAGACCCAAGGGTGTCCATCCCCAAGAGGGTCAGTTaGTGTAGCCACCATCAGAGC +
Preference number: 5 (lower is better)
Translates to: RTWDQVRCWLLADPRVSIPKRVS*CSHHQS
Trigger: GCTCTGATGGTGGCTACACAAACTGACCCTCTTGGG...GATGGACACCCTTGGGTCTGCAAGGAGCCAGCATCTTACTTGGTCCCACGTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR CAA 90 bp CTCCTTGCAGACCCAAGGGTGTCCATCATGTTCATGTGGGGGCACCACTACACCTTGTTGGTCTTCTCGTaGCCTTGTTCCAAAGCTGCC +
Preference number: 5 (lower is better)
Translates to: LLADPRVSIMFMWGHHYTLLVFS*PCSKAA
Trigger: GGCAGCTTTGGAACAAGGCAACGAGAAGACCAACAA...GGTGTAGTGGTGCCCCCACATGAACATGATGGACACCCTTGGGTCTGCAAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000408929.7
CDS-3UTR CAA 90 bp AGATGCTGGCTCCTTGCAGACCCAAGGGTGTCCATCATGTTCATGTGGGGGCACACCGTCTCATGTCCCTaGGGTTTCCTGCTGTTTTCA +
Preference number: 5 (lower is better)
Translates to: RCWLLADPRVSIMFMWGHTVSCP*GFLLFS
Trigger: TGAAAACAGCAGGAAACCCAAGGGACATGAGACGGT...GTGCCCCCACATGAACATGATGGACACCCTTGGGTCTGCAAGGAGCCAGCATCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR CAA 90 bp GATGTGCTGGAAGACCCAACGGTGGGACTTGATGACATGAACAGGCCACACATGGCGGAGAGATGCTGCTaGTGTTGCGGATGTACCCTT +
Preference number: 5 (lower is better)
Translates to: DVLEDPTVGLDDMNRPHMAERCC*CCGCTL
Trigger: AAGGGTACATCCGCAACACAAGCAGCATCTCTCCGC...CATGTGTGGCCTGTTCATGTCATCAAGTCCCACCGTTGGGTCTTCCAGCACATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535548.1
CDS-3UTR CAA 90 bp GATGTGCTGGAAGACCCAACGGTGGGACTTGATGACATGAACAGGCCACACATGCTGAATCCATTTCCATaGCCGCTGGAGCAGGCAGGT +
Preference number: 5 (lower is better)
Translates to: DVLEDPTVGLDDMNRPHMLNPFP*PLEQAG
Trigger: ACCTGCCTGCTCCAGCGGCAATGGAAATGGATTCAG...CATGTGTGGCCTGTTCATGTCATCAAGTCCCACCGTTGGGTCTTCCAGCACATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535548.1
CDS-3UTR CAA 90 bp GTGGGACCAAGTAAGATGCTGGCTCCTTGCAGACCCAAGGGTGTCCATCATGTTCCCAAGAGGGTCAGTTaGTGTAGCCACCATCAGAGC +
Preference number: 5 (lower is better)
Translates to: VGPSKMLAPCRPKGVHHVPKRVS*CSHHQS
Trigger: GCTCTGATGGTGGCTACACAAACTGACCCTCTTGGG...AACATGATGGACACCCTTGGGTCTGCAAGGAGCCAGCATCTTACTTGGTCCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR CAA 90 bp GATGCTGGCTCCTTGCAGACCCAAGGGTGTCCATCATGTTCATGTGGGGGCACCAGAAAGTCTGTGGTTTaGGCTCTGCTAGAAGGTGAG +
Preference number: 5 (lower is better)
Translates to: DAGSLQTQGCPSCSCGGTRKSVV*ALLEGE
Trigger: CTCACCTTCTAGCAGAGCCAAAACCACAGACTTTCT...GGTGCCCCCACATGAACATGATGGACACCCTTGGGTCTGCAAGGAGCCAGCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS CCA 90 bp ACCCATCGGGCTCTGTCTGTCCTTAGGAAGCCCCAAGGCTTCCCTTaGCAGAAAAGTGAAGGGACTTGTCATTTGGAAAGGCAGCATTCG +
Preference number: 5 (lower is better)
Translates to: THRALSVLRKPQGFP*QKSEGTCHLERQHS
Trigger: CGAATGCTGCCTTTCCAAATGACAAGTCCCTTCACTTTTCTGCCAAGGGAAGCCTTGGGGCTTCCTAAGGACAGACAGAGCCCGATGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000408929.7
CDS CCA 90 bp GTCCTTTGCTTCACTGGCGAGGTGCGGACTGATGTAGTCAAAGTTTaGGTTCTTATCCTCCGCAAGTTCAGATCTGCCGCCTCAGCCACT +
Preference number: 5 (lower is better)
Translates to: VLCFTGEVRTDVVKV*VLILRKFRSAASAT
Trigger: AGTGGCTGAGGCGGCAGATCTGAACTTGCGGAGGATAAGAACCCAAACTTTGACTACATCAGTCCGCACCTCGCCAGTGAAGCAAAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517825.1
ENST00000520164.6
CDS-3UTR CAA 90 bp GTCCCAAGAGGGTCAGTTTGTGTAGCCACCATCAGAGCTATAGGAGGACGTGGGCTTCTCCAAACCGTGTaGCTGAAGTTCTATGGGGCT +
Preference number: 5 (lower is better)
Translates to: VPRGSVCVATIRAIGGRGLLQTV*LKFYGA
Trigger: AGCCCCATAGAACTTCAGCAACACGGTTTGGAGAAG...CCCACGTCCTCCTATAGCTCTGATGGTGGCTACACAAACTGACCCTCTTGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS-3UTR CAA 90 bp GACGTGGGACCAAGTAAGATGCTGGCTCCTTGCAGACCCAAGGGTGTCCATCATCCACATTCACCGTTGTaGACAACACAACCTGAAACC +
Preference number: 5 (lower is better)
Translates to: DVGPSKMLAPCRPKGVHHPHSPL*TTQPET
Trigger: GGTTTCAGGTTGTGTTGTCAACAACGGTGAATGTGG...ATGATGGACACCCTTGGGTCTGCAAGGAGCCAGCATCTTACTTGGTCCCACGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR CAA 90 bp CCCAAGAGGGTCAGTTTGTGTAGCCACCATCAGAGCTATAGGAGGACGTGGGACACTGTAATTAGACTGTaGAGGCGTGGAGCTGGAAGA +
Preference number: 5 (lower is better)
Translates to: PKRVSLCSHHQSYRRTWDTVIRL*RRGAGR
Trigger: TCTTCCAGCTCCACGCCTCAACAGTCTAATTACAGT...GTCCCACGTCCTCCTATAGCTCTGATGGTGGCTACACAAACTGACCCTCTTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR CAA 90 bp AGTCCGGTCATGGCTCTGAATCCATTTCCATTGCCGCTGGAGCAGGCAGGTGAAACTGTAATTAGACTGTaGAGGCGTGGAGCTGGAAGA +
Preference number: 5 (lower is better)
Translates to: SPVMALNPFPLPLEQAGETVIRL*RRGAGR
Trigger: TCTTCCAGCTCCACGCCTCAACAGTCTAATTACAGT...TTCACCTGCCTGCTCCAGCGGCAATGGAAATGGATTCAGAGCCATGACCGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535548.1
CDS-3UTR CAA 90 bp GATGTGCTGGAAGACCCAACGGTGGGACTTGATGACATGAACAGGCCACACATGTTTCCCCAAAAGGCCTaGAGTAACCACGTGAGCCAA +
Preference number: 5 (lower is better)
Translates to: DVLEDPTVGLDDMNRPHMFPQKA*SNHVSQ
Trigger: TTGGCTCACGTGGTTACTCAAGGCCTTTTGGGGAAA...CATGTGTGGCCTGTTCATGTCATCAAGTCCCACCGTTGGGTCTTCCAGCACATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535548.1
CDS CCA 90 bp TGGGTGAGCCATTTAGAAATCCTGGTGAACCTGGAACACCCAAGTTaGCCATGGGGACATTGCTGTAGCCATTCATACTGTTGCTGGAGG +
Preference number: 5 (lower is better)
Translates to: WVSHLEILVNLEHPS*PWGHCCSHSYCCWR
Trigger: CCTCCAGCAACAGTATGAATGGCTACAGCAATGTCCCCATGGCCAACTTGGGTGTTCCAGGTTCACCAGGATTTCTAAATGGCTCACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000408929.7
ENST00000520164.6
ENST00000535548.1
CDS-3UTR CAA 90 bp AGCTATAGGAGGACGTGGGACCAAGTAAGATGCTGGCTCCTTGCAGACCCAAGGCTTCCTGGGGCTCCTTaGCAGAACTGTTTAGATTTA +
Preference number: 5 (lower is better)
Translates to: SYRRTWDQVRCWLLADPRLPGAP*QNCLDL
Trigger: TAAATCTAAACAGTTCTGCAAAGGAGCCCCAGGAAG...CCTTGGGTCTGCAAGGAGCCAGCATCTTACTTGGTCCCACGTCCTCCTATAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR CAA 90 bp CTGAAGAGGAAAATGGGAGGATGGAGGATGTGCTGGAAGACCCAACGGTGGGACCTTCCTGGGGCTCCTTaGCAGAACTGTTTAGATTTA +
Preference number: 5 (lower is better)
Translates to: LKRKMGGWRMCWKTQRWDLPGAP*QNCLDL
Trigger: TAAATCTAAACAGTTCTGCAAAGGAGCCCCAGGAAG...GTCCCACCGTTGGGTCTTCCAGCACATCCTCCATCCTCCCATTTTCCTCTTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000535548.1
CDS-3UTR CAA 90 bp AGAGGGTCAGTTTGTGTAGCCACCATCAGAGCTATAGGAGGACGTGGGACCAAGACTGTAATTAGACTGTaGAGGCGTGGAGCTGGAAGA +
Preference number: 5 (lower is better)
Translates to: RGSVCVATIRAIGGRGTKTVIRL*RRGAGR
Trigger: TCTTCCAGCTCCACGCCTCAACAGTCTAATTACAGT...CTTGGTCCCACGTCCTCCTATAGCTCTGATGGTGGCTACACAAACTGACCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR CAA 90 bp GCTCTTAGCACTGACTACGTCAATGACATCTTTTGTCCTTGTCCCAAGAGGGTCCTGAATCCATTTCCATaGCCGCTGGAGCAGGCAGGT +
Preference number: 5 (lower is better)
Translates to: ALSTDYVNDIFCPCPKRVLNPFP*PLEQAG
Trigger: ACCTGCCTGCTCCAGCGGCAATGGAAATGGATTCAG...GACCCTCTTGGGACAAGGACAAAAGATGTCATTGACGTAGTCAGTGCTAAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR CAA 90 bp AGGCAAGGTTCTTCCCCTCTAAGAGCTAGTCACAAAACGATGAAGAGCCCATCAAAGATAACCCGTCCTTaGCTTCACTGGCGAGGTGCG +
Preference number: 5 (lower is better)
Translates to: RQGSSPLRASHKTMKSPSKITRP*LHWRGA
Trigger: CGCACCTCGCCAGTGAAGCAAAGGACGGGTTATCTT...TGATGGGCTCTTCATCGTTTTGTGACTAGCTCTTAGAGGGGAAGAACCTTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS-3UTR CAA 90 bp GGACCAAGTAAGATGCTGGCTCCTTGCAGACCCAAGGGTGTCCATCATGTTCATTTCCCAAGGGGTCCCTaGGTTAAGAAAGTCTGTGGT +
Preference number: 5 (lower is better)
Translates to: GPSKMLAPCRPKGVHHVHFPRGP*VKKVCG
Trigger: ACCACAGACTTTCTTAACCAAGGGACCCCTTGGGAA...ATGAACATGATGGACACCCTTGGGTCTGCAAGGAGCCAGCATCTTACTTGGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS-3UTR CAA 90 bp GCTCTTAGCACTGACTACGTCAATGACATCTTTTGTCCTTGTCCCAAGAGGGTCGAAGGGACTTGTCATTaGGAAAGGCAGCATTCGGGC +
Preference number: 5 (lower is better)
Translates to: ALSTDYVNDIFCPCPKRVEGTCH*ERQHSG
Trigger: GCCCGAATGCTGCCTTTCCAAATGACAAGTCCCTTC...GACCCTCTTGGGACAAGGACAAAAGATGTCATTGACGTAGTCAGTGCTAAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000408929.7
CDS-3UTR CAA 90 bp AGAGGGTCAGTTTGTGTAGCCACCATCAGAGCTATAGGAGGACGTGGGACCAAGCATCCACATTCACCGTaGTTGACAACACAACCTGAA +
Preference number: 5 (lower is better)
Translates to: RGSVCVATIRAIGGRGTKHPHSP*LTTQPE
Trigger: TTCAGGTTGTGTTGTCAACAACGGTGAATGTGGATG...CTTGGTCCCACGTCCTCCTATAGCTCTGATGGTGGCTACACAAACTGACCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR CAA 90 bp TTTGTCCTTGTCCCAAGAGGGTCAGTTTGTGTAGCCACCATCAGAGCTATAGGAATGGATCGAGTCTTCTaGCTCTCCGTCCATGCTTGG +
Preference number: 5 (lower is better)
Translates to: FVLVPRGSVCVATIRAIGMDRVF*LSVHAW
Trigger: CCAAGCATGGACGGAGAGCAAGAAGACTCGATCCAT...TCCTATAGCTCTGATGGTGGCTACACAAACTGACCCTCTTGGGACAAGGACAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR CAA 90 bp AGGCAAGGTTCTTCCCCTCTAAGAGCTAGTCACAAAACGATGAAGAGCCCATCAATGGATCGAGTCTTCTaGCTCTCCGTCCATGCTTGG +
Preference number: 5 (lower is better)
Translates to: RQGSSPLRASHKTMKSPSMDRVF*LSVHAW
Trigger: CCAAGCATGGACGGAGAGCAAGAAGACTCGATCCAT...TGATGGGCTCTTCATCGTTTTGTGACTAGCTCTTAGAGGGGAAGAACCTTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS-3UTR CAA 90 bp TCTTTTGTCCTTGTCCCAAGAGGGTCAGTTTGTGTAGCCACCATCAGAGCTATAGCGGAGAGATGCTGCTaGTGTTGCGGATGTACCCTT +
Preference number: 5 (lower is better)
Translates to: SFVLVPRGSVCVATIRAIAERCC*CCGCTL
Trigger: AAGGGTACATCCGCAACACAAGCAGCATCTCTCCGC...TATAGCTCTGATGGTGGCTACACAAACTGACCCTCTTGGGACAAGGACAAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR CAA 90 bp AGTCCGGTCATGGCTCTGAATCCATTTCCATTGCCGCTGGAGCAGGCAGGTGAAAAGGCACTCTTCTGTTaGACAGCAGGAAAAACTGAA +
Preference number: 5 (lower is better)
Translates to: SPVMALNPFPLPLEQAGEKALFC*TAGKTE
Trigger: TTCAGTTTTTCCTGCTGTCAAACAGAAGAGTGCCTT...TTCACCTGCCTGCTCCAGCGGCAATGGAAATGGATTCAGAGCCATGACCGGACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000535548.1
CDS-3UTR CAA 90 bp AGGACGTGGGACCAAGTAAGATGCTGGCTCCTTGCAGACCCAAGGGTGTCCATCCAGGTTTCTAAAACCTaGGATTCTCATGTGCATAGA +
Preference number: 5 (lower is better)
Translates to: RTWDQVRCWLLADPRVSIQVSKT*DSHVHR
Trigger: TCTATGCACATGAGAATCCAAGGTTTTAGAAACCTG...GATGGACACCCTTGGGTCTGCAAGGAGCCAGCATCTTACTTGGTCCCACGTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS GCA 90 bp TTGGGGCACATTGCTTCTTCTAGAAAACTGATTGAGACCATACCCTaGCCGAAAGGAGAGGTGCCATCGCTTATATCCTGCACCACACAT +
Preference number: 5 (lower is better)
Translates to: LGHIASSRKLIETIP*PKGEVPSLISCTTH
Trigger: ATGTGTGGTGCAGGATATAAGCGATGGCACCTCTCCTTTCGGGCAGGGTATGGTCTCAATCAGTTTTCTAGAAGAAGCAATGTGCCCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517825.1
CDS CCA 90 bp AGCCATTTAGAAATCCTGGTGAACCTGGAACACCCAAGTTGGCCATaGGGACATTGCTGTAGCCATTCATACTGTTGCTGGAGGTACTGT +
Preference number: 5 (lower is better)
Translates to: SHLEILVNLEHPSWP*GHCCSHSYCCWRYC
Trigger: ACAGTACCTCCAGCAACAGTATGAATGGCTACAGCAATGTCCCCATGGCCAACTTGGGTGTTCCAGGTTCACCAGGATTTCTAAATGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000408929.7
ENST00000520164.6
ENST00000535548.1
CDS CCA 90 bp CCTCAGTTCCTAGGCTATGCTATACTTTCCACGAAGAAACCAAGCTaGCTTTCTGGGAAGAATGCCAGAGGTTCCATTCTCCCAACTGAG +
Preference number: 5 (lower is better)
Translates to: PQFLGYAILSTKKPS*LSGKNARGSILPTE
Trigger: CTCAGTTGGGAGAATGGAACCTCTGGCATTCTTCCCAGAAAGCCAGCTTGGTTTCTTCGTGGAAAGTATAGCATAGCCTAGGAACTGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517825.1
CDS-3UTR CAA 90 bp AGAGGGTCAGTTTGTGTAGCCACCATCAGAGCTATAGGAGGACGTGGGACCAAGAAGGCACTCTTCTGTTaGACAGCAGGAAAAACTGAA +
Preference number: 5 (lower is better)
Translates to: RGSVCVATIRAIGGRGTKKALFC*TAGKTE
Trigger: TTCAGTTTTTCCTGCTGTCAAACAGAAGAGTGCCTT...CTTGGTCCCACGTCCTCCTATAGCTCTGATGGTGGCTACACAAACTGACCCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR CAA 90 bp TGTAGCCACCATCAGAGCTATAGGAGGACGTGGGACCAAGTAAGATGCTGGCTCGCTCAGGGGAGAACGTaGAAAGCTAATAATAGGAAT +
Preference number: 5 (lower is better)
Translates to: CSHHQSYRRTWDQVRCWLAQGRT*KANNRN
Trigger: ATTCCTATTATTAGCTTTCAACGTTCTCCCCTGAGC...GAGCCAGCATCTTACTTGGTCCCACGTCCTCCTATAGCTCTGATGGTGGCTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS TCA 90 bp GGTGCCATCGCTTATATCCTGCACCACACATACTACTTATTAGGCTaGAGCTGGTGCACCTGGAAAAGACTCCACCACAGATTTAGAGAC +
Preference number: 5 (lower is better)
Translates to: GAIAYILHHTYYLLG*SWCTWKRLHHRFRD
Trigger: GTCTCTAAATCTGTGGTGGAGTCTTTTCCAGGTGCACCAGCTTCAGCCTAATAAGTAGTATGTGTGGTGCAGGATATAAGCGATGGCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517825.1
CDS CCA 90 bp AGACTCCACCACAGATTTAGAGACACGTGTTCCAAAGGAAGATTCTaGCTTCTTCCAAGAAAGGCCAGCATGAGGAGGCCTTTGTTGGAT +
Preference number: 5 (lower is better)
Translates to: RLHHRFRDTCSKGRF*LLPRKASMRRPLLD
Trigger: ATCCAACAAAGGCCTCCTCATGCTGGCCTTTCTTGGAAGAAGCCAGAATCTTCCTTTGGAACACGTGTCTCTAAATCTGTGGTGGAGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517825.1
CDS-3UTR CAA 90 bp TTAGCACTGACTACGTCAATGACATCTTTTGTCCTTGTCCCAAGAGGGTCAGTTACCGTCTCATGTCCCTaGGGTTTCCTGCTGTTTTCA +
Preference number: 5 (lower is better)
Translates to: LALTTSMTSFVLVPRGSVTVSCP*GFLLFS
Trigger: TGAAAACAGCAGGAAACCCAAGGGACATGAGACGGT...AACTGACCCTCTTGGGACAAGGACAAAAGATGTCATTGACGTAGTCAGTGCTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR CAA 90 bp TTTTGTCCTTGTCCCAAGAGGGTCAGTTTGTGTAGCCACCATCAGAGCTATAGGCATCCACATTCACCGTaGTTGACAACACAACCTGAA +
Preference number: 5 (lower is better)
Translates to: FCPCPKRVSLCSHHQSYRHPHSP*LTTQPE
Trigger: TTCAGGTTGTGTTGTCAACAACGGTGAATGTGGATG...CCTATAGCTCTGATGGTGGCTACACAAACTGACCCTCTTGGGACAAGGACAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS-3UTR CAA 90 bp ATGACATCTTTTGTCCTTGTCCCAAGAGGGTCAGTTTGTGTAGCCACCATCAGAGGGAGAGGAAAGGACTaGGATGTTCTAAGACTGACT +
Preference number: 5 (lower is better)
Translates to: MTSFVLVPRGSVCVATIRGRGKD*DVLRLT
Trigger: AGTCAGTCTTAGAACATCCAAGTCCTTTCCTCTCCC...TCTGATGGTGGCTACACAAACTGACCCTCTTGGGACAAGGACAAAAGATGTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS TCA 90 bp CATCATCCTCTTCAAGCATCTCAGAGAACACTGCAAAGCTGCCATTaGTATTTCAGTAGCCTCTTGAAGCCTACAGAAGTGACTGCACCT +
Preference number: 5 (lower is better)
Translates to: HHPLQASQRTLQSCH*YFSSLLKPTEVTAP
Trigger: AGGTGCAGTCACTTCTGTAGGCTTCAAGAGGCTACTGAAATATCAATGGCAGCTTTGCAGTGTTCTCTGAGATGCTTGAAGAGGATGATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517825.1
CDS-3UTR CAA 90 bp ATGACATCTTTTGTCCTTGTCCCAAGAGGGTCAGTTTGTGTAGCCACCATCAGAGGAGCTGGGAATGAATaGATGGGTTGGAGTATTTGT +
Preference number: 5 (lower is better)
Translates to: MTSFVLVPRGSVCVATIRGAGNE*MGWSIC
Trigger: ACAAATACTCCAACCCATCAATTCATTCCCAGCTCC...TCTGATGGTGGCTACACAAACTGACCCTCTTGGGACAAGGACAAAAGATGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS CCA 90 bp CTGGGAAGAATGCCAGAGGTTCCATTCTCCCAACTGAGAATTCGTTaGAATATTGGAATAACAACTTTGGAGACTGTGGTCTCTCCAATC +
Preference number: 5 (lower is better)
Translates to: LGRMPEVPFSQLRIR*NIGITTLETVVSPI
Trigger: GATTGGAGAGACCACAGTCTCCAAAGTTGTTATTCCAATATTCCAACGAATTCTCAGTTGGGAGAATGGAACCTCTGGCATTCTTCCCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517825.1
CDS-3UTR CAA 90 bp GACAGGGAGAGGAAAGGACTTGGATGTTCTAAGACTGACTCTAAAGAGTCCATCAAGGCACTCTTCTGTTaGACAGCAGGAAAAACTGAA +
Preference number: 5 (lower is better)
Translates to: DRERKGLGCSKTDSKESIKALFC*TAGKTE
Trigger: TTCAGTTTTTCCTGCTGTCAAACAGAAGAGTGCCTT...GATGGACTCTTTAGAGTCAGTCTTAGAACATCCAAGTCCTTTCCTCTCCCTGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS-3UTR CAA 90 bp AGACTGACTCTAAAGAGTCCATCAAACAGAGTTATCTTCTCCAAACCGTGTTGCCTTCCTGGGGCTCCTTaGCAGAACTGTTTAGATTTA +
Preference number: 5 (lower is better)
Translates to: RLTLKSPSNRVIFSKPCCLPGAP*QNCLDL
Trigger: TAAATCTAAACAGTTCTGCAAAGGAGCCCCAGGAAG...GCAACACGGTTTGGAGAAGATAACTCTGTTTGATGGACTCTTTAGAGTCAGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS-3UTR CAA 90 bp TTCTGCATTAGGGTGTTCTGTGGGAATCTACATGTTCTTGCCCTTGGGTCAATATTGTTGGTCTTCTCGTaGCCTTGTTCTTTGTCATTC +
Preference number: 5 (lower is better)
Translates to: FCIRVFCGNLHVLALGSILLVFS*PCSLSF
Trigger: GAATGACAAAGAACAAGGCAACGAGAAGACCAACAA...TATTGACCCAAGGGCAAGAACATGTAGATTCCCACAGAACACCCTAATGCAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS-3UTR CAA 90 bp CAAACAGAGTTATCTTCTCCAAACCGTGTTGCTGAAGTTCTATGGGGCTGTGTACAAGTGACATCTTTATaGGCAATCCCAATATGCCTG +
Preference number: 5 (lower is better)
Translates to: QTELSSPNRVAEVLWGCVQVTSL*AIPICL
Trigger: CAGGCATATTGGGATTGCCAATAAAGATGTCACTTG...TACACAGCCCCATAGAACTTCAGCAACACGGTTTGGAGAAGATAACTCTGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS CCA 90 bp AATGCCAGAGGTTCCATTCTCCCAACTGAGAATTCGTTGGAATATTaGAATAACAACTTTGGAGACTGTGGTCTCTCCAATCCATTTCAG +
Preference number: 5 (lower is better)
Translates to: NARGSILPTENSLEY*NNNFGDCGLSNPFQ
Trigger: CTGAAATGGATTGGAGAGACCACAGTCTCCAAAGTTGTTATTCCAATATTCCAACGAATTCTCAGTTGGGAGAATGGAACCTCTGGCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517825.1
CDS-3UTR CAA 90 bp GACAGGGAGAGGAAAGGACTTGGATGTTCTAAGACTGACTCTAAAGAGTCCATCATTTCTCTTTCAGAGTaGGTCCTCTTCCTAAAGTAT +
Preference number: 5 (lower is better)
Translates to: DRERKGLGCSKTDSKESIISLSE*VLFLKY
Trigger: ATACTTTAGGAAGAGGACCAACTCTGAAAGAGAAAT...GATGGACTCTTTAGAGTCAGTCTTAGAACATCCAAGTCCTTTCCTCTCCCTGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS TCA 90 bp CTGCACCTCCTAACCCATCATTATATTATTGAAGAACAAAGATGCTaGGTGCTTTGTCCAAGGTCAGAAGCTAGGACAAGATCAGAATTC +
Preference number: 5 (lower is better)
Translates to: LHLLTHHYIIEEQRC*VLCPRSEARTRSEF
Trigger: GAATTCTGATCTTGTCCTAGCTTCTGACCTTGGACAAAGCACTCAGCATCTTTGTTCTTCAATAATATAATGATGGGTTAGGAGGTGCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517825.1
CDS-3UTR CAA 90 bp AACATTTCATCATTCAATTCAGGTTGCGTTTTAAGAAAGTCTTCCGTGCTGGTATCGTTGCCTTGTTCTTaGTCATTCTCCACAAAGTCC +
Preference number: 5 (lower is better)
Translates to: NISSFNSGCVLRKSSVLVSLPCS*SFSTKS
Trigger: GGACTTTGTGGAGAATGACAAAGAACAAGGCAACGA...TACCAGCACGGAAGACTTTCTTAAAACGCAACCTGAATTGAATGATGAAATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS-3UTR CAA 90 bp AACATTTCATCATTCAATTCAGGTTGCGTTTTAAGAAAGTCTTCCGTGCTGGTACATTCCGTCTCATTCTaGACTAGAAACTGTCGAGTG +
Preference number: 5 (lower is better)
Translates to: NISSFNSGCVLRKSSVLVHSVSF*TRNCRV
Trigger: CACTCGACAGTTTCTAGTCAAGAATGAGACGGAATG...TACCAGCACGGAAGACTTTCTTAAAACGCAACCTGAATTGAATGATGAAATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520164.6
CDS GCA 72 bp TTGGAAAGGCAGCATTCGGGCCTATCCCGCGAGGACTaGGCACGCAGGGCCACGAGCTCAGGGACTGAGTTC +
Preference number: 6 (lower is better)
Translates to: LERQHSGLSRED*ARRATSSGTEF
Trigger: GAACTCAGTCCCTGAGCTCGTGGCCCTGCGTGCGCAGTCCTCGCGGGATAGGCCCGAATGCTGCCTTTCCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408929.7
CDS CCA 72 bp CATCATGCCACTGTGCGCTGGGGAGCTAGAGAGGGCTaGAAGCTGGCTGGGATTCCTGGGGACGCTGTAGAG +
Preference number: 6 (lower is better)
Translates to: HHATVRWGAREG*KLAGIPGDAVE
Trigger: CTCTACAGCGTCCCCAGGAATCCCAGCCAGCTTCCAGCCCTCTCTAGCTCCCCAGCGCACAGTGGCATGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000408929.7
ENST00000520164.6
ENST00000535548.1
CDS CCA 72 bp GCCATAGGAGTTGATTCCCATCATGCCACTGTGCGCTaGGGAGCTAGAGAGGGCTGGAAGCTGGCTGGGATT +
Preference number: 6 (lower is better)
Translates to: AIGVDSHHATVR*GAREGWKLAGI
Trigger: AATCCCAGCCAGCTTCCAGCCCTCTCTAGCTCCCCAGCGCACAGTGGCATGATGGGAATCAACTCCTATGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000408929.7
ENST00000520164.6
ENST00000535548.1
CDS GCA 72 bp GAGGCGTGGAGCTGGAAGAGTATCCCCGCGGAGAGATaGTGCTTGTGTTGCGGATGTACCCTTGATTATTTC +
Preference number: 6 (lower is better)
Translates to: EAWSWKSIPAER*CLCCGCTLDYF
Trigger: GAAATAATCAAGGGTACATCCGCAACACAAGCAGCATCTCTCCGCGGGGATACTCTTCCAGCTCCACGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000408929.7
ENST00000520164.6
ENST00000535548.1
CDS GCA 72 bp GCGTGGAGCTGGAAGAGTATCCCCGCGGAGAGATGCTaGTTGTGTTGCGGATGTACCCTTGATTATTTCCTT +
Preference number: 6 (lower is better)
Translates to: AWSWKSIPAERC*LCCGCTLDYFL
Trigger: AAGGAAATAATCAAGGGTACATCCGCAACACAAGCAGCATCTCTCCGCGGGGATACTCTTCCAGCTCCACGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000408929.7
ENST00000520164.6
ENST00000535548.1
CDS CCA 72 bp TTCACTGGCGAGGTGCGGACTGATGTAGTCAAAGTTTaGGTTCTTATCCTCCGCAAGTTCAGATCTGCCGCC +
Preference number: 6 (lower is better)
Translates to: FTGEVRTDVVKV*VLILRKFRSAA
Trigger: GGCGGCAGATCTGAACTTGCGGAGGATAAGAACCCAAACTTTGACTACATCAGTCCGCACCTCGCCAGTGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517825.1
ENST00000520164.6
CDS CAA 90 bp GCTGTAGCCATTCATACTGTTGCTGGAGGTACTGTAATTAGACTGTaGAGGCGTGGAGCTGGAAGAGTATCCCCGCGGAGAGATGCTGCT +
Preference number: 6 (lower is better)
Translates to: AVAIHTVAGGTVIRL*RRGAGRVSPRRDAA
Trigger: AGCAGCATCTCTCCGCGGGGATACTCTTCCAGCTCCACGCCTCAACAGTCTAATTACAGTACCTCCAGCAACAGTATGAATGGCTACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000408929.7
ENST00000520164.6
ENST00000535548.1
CDS GCA 72 bp GTGAACCTGGAACACCCAAGTTGGCCATGGGGACATTaGTGTAGCCATTCATACTGTTGCTGGAGGTACTGT +
Preference number: 6 (lower is better)
Translates to: VNLEHPSWPWGH*CSHSYCCWRYC
Trigger: ACAGTACCTCCAGCAACAGTATGAATGGCTACAGCAATGTCCCCATGGCCAACTTGGGTGTTCCAGGTTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000408929.7
ENST00000520164.6
ENST00000535548.1
CDS CCA 72 bp GAAATCCTGGTGAACCTGGAACACCCAAGTTGGCCATaGGGACATTGCTGTAGCCATTCATACTGTTGCTGG +
Preference number: 6 (lower is better)
Translates to: EILVNLEHPSWP*GHCCSHSYCCW
Trigger: CCAGCAACAGTATGAATGGCTACAGCAATGTCCCCATGGCCAACTTGGGTGTTCCAGGTTCACCAGGATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000408929.7
ENST00000520164.6
ENST00000535548.1
CDS CAA 72 bp TGGAGCTGGAAGAGTATCCCCGCGGAGAGATGCTGCTaGTGTTGCGGATGTACCCTTGATTATTTCCTTGTG +
Preference number: 6 (lower is better)
Translates to: WSWKSIPAERCC*CCGCTLDYFLV
Trigger: CACAAGGAAATAATCAAGGGTACATCCGCAACACAAGCAGCATCTCTCCGCGGGGATACTCTTCCAGCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000408929.7
ENST00000520164.6
ENST00000535548.1
CDS TCA 72 bp ATAACCCGTCCTTTGCTTCACTGGCGAGGTGCGGACTaGTGTAGTCAAAGTTTGGGTTCTTATCCTCCGCAA +
Preference number: 6 (lower is better)
Translates to: ITRPLLHWRGAD*CSQSLGSYPPQ
Trigger: TTGCGGAGGATAAGAACCCAAACTTTGACTACATCAGTCCGCACCTCGCCAGTGAAGCAAAGGACGGGTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517825.1
ENST00000520164.6
CDS CAA 72 bp ATTCATACTGTTGCTGGAGGTACTGTAATTAGACTGTaGAGGCGTGGAGCTGGAAGAGTATCCCCGCGGAGA +
Preference number: 6 (lower is better)
Translates to: IHTVAGGTVIRL*RRGAGRVSPRR
Trigger: TCTCCGCGGGGATACTCTTCCAGCTCCACGCCTCAACAGTCTAATTACAGTACCTCCAGCAACAGTATGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000408929.7
ENST00000520164.6
ENST00000535548.1
CDS CCA 72 bp CACAGATTTAGAGACACGTGTTCCAAAGGAAGATTCTaGCTTCTTCCAAGAAAGGCCAGCATGAGGAGGCCT +
Preference number: 6 (lower is better)
Translates to: HRFRDTCSKGRF*LLPRKASMRRP
Trigger: AGGCCTCCTCATGCTGGCCTTTCTTGGAAGAAGCCAGAATCTTCCTTTGGAACACGTGTCTCTAAATCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517825.1
CDS TCA 72 bp GCTTATATCCTGCACCACACATACTACTTATTAGGCTaGAGCTGGTGCACCTGGAAAAGACTCCACCACAGA +
Preference number: 6 (lower is better)
Translates to: AYILHHTYYLLG*SWCTWKRLHHR
Trigger: TCTGTGGTGGAGTCTTTTCCAGGTGCACCAGCTTCAGCCTAATAAGTAGTATGTGTGGTGCAGGATATAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517825.1
CDS GCA 72 bp ATTGCTTCTTCTAGAAAACTGATTGAGACCATACCCTaGCCGAAAGGAGAGGTGCCATCGCTTATATCCTGC +
Preference number: 6 (lower is better)
Translates to: IASSRKLIETIP*PKGEVPSLISC
Trigger: GCAGGATATAAGCGATGGCACCTCTCCTTTCGGGCAGGGTATGGTCTCAATCAGTTTTCTAGAAGAAGCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517825.1
CDS CCA 72 bp TGTAGAGGAGCTGTAACTTGTAGTGAGTGCCGTTGTTaGTCTTCTCGTTGCCTTGTTCCAAAGCTGCCTTTA +
Preference number: 6 (lower is better)
Translates to: CRGAVTCSECRC*SSRCLVPKLPL
Trigger: TAAAGGCAGCTTTGGAACAAGGCAACGAGAAGACCAACAACGGCACTCACTACAAGTTACAGCTCCTCTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000408929.7
CDS CAA 90 bp GCCAAGCAGCAATCACCGAGAATAATAAAGTGGGTGCCACTTAACTaGGGGCACATTGCTTCTTCTAGAAAACTGATTGAGACCATACCC +
Preference number: 6 (lower is better)
Translates to: AKQQSPRIIKWVPLN*GHIASSRKLIETIP
Trigger: GGGTATGGTCTCAATCAGTTTTCTAGAAGAAGCAATGTGCCCCAAGTTAAGTGGCACCCACTTTATTATTCTCGGTGATTGCTGCTTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517825.1
CDS GCA 72 bp AAGATCAGAATTCCAGCCTCCTCAGTTCCTAGGCTATaGTATACTTTCCACGAAGAAACCAAGCTGGCTTTC +
Preference number: 6 (lower is better)
Translates to: KIRIPASSVPRL*YTFHEETKLAF
Trigger: GAAAGCCAGCTTGGTTTCTTCGTGGAAAGTATAGCATAGCCTAGGAACTGAGGAGGCTGGAATTCTGATCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517825.1
CDS CCA 72 bp TGTAGAGGAGCTGTAACTTGTAGTGAGTGCCGTTGTTaGTCTTCTCGTTGCCTTGTTCTTTGTCATTCTCCA +
Preference number: 6 (lower is better)
Translates to: CRGAVTCSECRC*SSRCLVLCHSP
Trigger: TGGAGAATGACAAAGAACAAGGCAACGAGAAGACCAACAACGGCACTCACTACAAGTTACAGCTCCTCTACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517825.1
ENST00000520164.6
CDS CAA 90 bp CCATTCTCCCAACTGAGAATTCGTTGGAATATTGGAATAACAACTTaGGAGACTGTGGTCTCTCCAATCCATTTCAGGACCTGGCTAGAA +
Preference number: 6 (lower is better)
Translates to: PFSQLRIRWNIGITT*ETVVSPIHFRTWLE
Trigger: TTCTAGCCAGGTCCTGAAATGGATTGGAGAGACCACAGTCTCCAAAGTTGTTATTCCAATATTCCAACGAATTCTCAGTTGGGAGAATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517825.1
CDS CAA 90 bp TCTGGGAAGAATGCCAGAGGTTCCATTCTCCCAACTGAGAATTCGTaGGAATATTGGAATAACAACTTTGGAGACTGTGGTCTCTCCAAT +
Preference number: 6 (lower is better)
Translates to: SGKNARGSILPTENS*EYWNNNFGDCGLSN
Trigger: ATTGGAGAGACCACAGTCTCCAAAGTTGTTATTCCAATATTCCAACGAATTCTCAGTTGGGAGAATGGAACCTCTGGCATTCTTCCCAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517825.1
CDS CCA 72 bp ATGCCAGAGGTTCCATTCTCCCAACTGAGAATTCGTTaGAATATTGGAATAACAACTTTGGAGACTGTGGTC +
Preference number: 6 (lower is better)
Translates to: MPEVPFSQLRIR*NIGITTLETVV
Trigger: GACCACAGTCTCCAAAGTTGTTATTCCAATATTCCAACGAATTCTCAGTTGGGAGAATGGAACCTCTGGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517825.1
CDS CAA 72 bp TTGTTGACAACACAACCTGAAACCGTCTCATGTCCCTaGGGTTTCCTGCTGTTTTCAAACAATTCTGATTGC +
Preference number: 6 (lower is better)
Translates to: LLTTQPETVSCP*GFLLFSNNSDC
Trigger: GCAATCAGAATTGTTTGAAAACAGCAGGAAACCCAAGGGACATGAGACGGTTTCAGGTTGTGTTGTCAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000408929.7
ENST00000520164.6
CDS CAA 72 bp CAACTGAGAATTCGTTGGAATATTGGAATAACAACTTaGGAGACTGTGGTCTCTCCAATCCATTTCAGGACC +
Preference number: 6 (lower is better)
Translates to: QLRIRWNIGITT*ETVVSPIHFRT
Trigger: GGTCCTGAAATGGATTGGAGAGACCACAGTCTCCAAAGTTGTTATTCCAATATTCCAACGAATTCTCAGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517825.1
CDS CAA 72 bp AATGCCAGAGGTTCCATTCTCCCAACTGAGAATTCGTaGGAATATTGGAATAACAACTTTGGAGACTGTGGT +
Preference number: 6 (lower is better)
Translates to: NARGSILPTENS*EYWNNNFGDCG
Trigger: ACCACAGTCTCCAAAGTTGTTATTCCAATATTCCAACGAATTCTCAGTTGGGAGAATGGAACCTCTGGCATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517825.1
CDS CAA 90 bp CTAAAATGGCAAAGACACTATACACATCCAACAAACATTTTATATTaGCCCATCATCCTCTTCAAGCATCTCAGAGAACACTGCAAAGCT +
Preference number: 6 (lower is better)
Translates to: LKWQRHYTHPTNILY*PIILFKHLREHCKA
Trigger: AGCTTTGCAGTGTTCTCTGAGATGCTTGAAGAGGATGATGGGCAAATATAAAATGTTTGTTGGATGTGTATAGTGTCTTTGCCATTTTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517825.1