RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EBF1 (Homo sapiens)

Ensembl gene IDs: ENSG00000164330

Ensembl transcript IDs: ENST00000313708.11, ENST00000380654.8, ENST00000517373.1, ENST00000518323.1, ENST00000518836.5, ENST00000519739.5, ENST00000519890.5, ENST00000522192.5, ENST00000523315.1, ENST00000523464.1, ENST00000622875.4

Found 414 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACCCTGTTCCATGAAGTCTCAAAGGAGATTCTCACACAGTATGTGTaGCACCAAGCTCTCGAGAGGCCATCGGCTTCAGAAGAAACTGAC +
Preference number: 1 (lower is better)
Translates to: TLFHEVSKEILTQYV*HQALERPSASEETD
Trigger: GTCAGTTTCTTCTGAAGCCGATGGCCTCTCGAGAGCTTGGTGGCACACATACTGTGTGAGAATCTCCTTTGAGACTTCATGGAACAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
3UTR TCA 90 bp AGGCTCTTTGGACTTTCAAGAAGAGTTCTAACCACTGCACATGGCTaGCAGATGGGTAGTGTCTGTTGTCAAGGTCTAAGCCGGACACCT +
Preference number: 1 (lower is better)
Translates to: RLFGLSRRVLTTAHG*QMGSVCCQGLSRTP
Trigger: AGGTGTCCGGCTTAGACCTTGACAACAGACACTACCCATCTGTCAGCCATGTGCAGTGGTTAGAACTCTTCTTGAAAGTCCAAAGAGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
3UTR CCA 90 bp CGAGTAAACTTTAAACTTGCAAATGGGGGAGCGTACGTGAGGTTTTaGCTTGTTAACTGGAGGGCAGAGTGTGGAATTCTGTGCCTGGAC +
Preference number: 1 (lower is better)
Translates to: RVNFKLANGGAYVRF*LVNWRAECGILCLD
Trigger: GTCCAGGCACAGAATTCCACACTCTGCCCTCCAGTTAACAAGCCAAAACCTCACGTACGCTCCCCCATTTGCAAGTTTAAAGTTTACTCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
3UTR CCA 90 bp GGTTTTGGCTTGTTAACTGGAGGGCAGAGTGTGGAATTCTGTGCCTaGACCCTGTTCCATGAAGTCTCAAAGGAGATTCTCACACAGTAT +
Preference number: 1 (lower is better)
Translates to: GFGLLTGGQSVEFCA*TLFHEVSKEILTQY
Trigger: ATACTGTGTGAGAATCTCCTTTGAGACTTCATGGAACAGGGTCCAGGCACAGAATTCCACACTCTGCCCTCCAGTTAACAAGCCAAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
3UTR TCA 90 bp GTAGATTTAGAGATGACTTCATTTAAGCTGCATCCTAGTACAATGTaGGGCCAGGGCAATGTTATGCAATCCAGTCATCCAGAAGCTGTA +
Preference number: 1 (lower is better)
Translates to: VDLEMTSFKLHPSTM*GQGNVMQSSHPEAV
Trigger: TACAGCTTCTGGATGACTGGATTGCATAACATTGCCCTGGCCTCACATTGTACTAGGATGCAGCTTAAATGAAGTCATCTCTAAATCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
3UTR-3UTR TCA 90 bp TGTTGTCAAGGTCTAAGCCGGACACCTTCCCGGCTGACCGTTCATTCCTTCAGACTGGACCCTGTTCCATaGAGTCTCAAAGGAGATTCT +
Preference number: 2 (lower is better)
Translates to: CCQGLSRTPSRLTVHSFRLDPVP*SLKGDS
Trigger: AGAATCTCCTTTGAGACTTCATGGAACAGGGTCCAG...TCTGAAGGAATGAACGGTCAGCCGGGAAGGTGTCCGGCTTAGACCTTGACAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
3UTR-3UTR GCA 90 bp TGTTGTCAAGGTCTAAGCCGGACACCTTCCCGGCTGACCGTTCATTCCTTCAGAATCCATATGGGGGCATaGACAGTTGCAGCATTGTTG +
Preference number: 2 (lower is better)
Translates to: CCQGLSRTPSRLTVHSFRIHMGA*TVAALL
Trigger: CAACAATGCTGCAACTGTGCATGCCCCCATATGGAT...TCTGAAGGAATGAACGGTCAGCCGGGAAGGTGTCCGGCTTAGACCTTGACAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
3UTR-3UTR CCA 90 bp AATGTGAGGCCAGGGCAATGTTATGCAATCCAGTCATCCAGAAGCTGTATTTTTCTGGAGGGCAGAGTGTaGAATTCTGTGCCTGGACCC +
Preference number: 2 (lower is better)
Translates to: NVRPGQCYAIQSSRSCIFLEGRV*NSVPGP
Trigger: GGGTCCAGGCACAGAATTCCACACTCTGCCCTCCAG...AAAAATACAGCTTCTGGATGACTGGATTGCATAACATTGCCCTGGCCTCACATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
3UTR-3UTR CCA 90 bp TGTTGTCAAGGTCTAAGCCGGACACCTTCCCGGCTGACCGTTCATTCCTTCAGATGCACTGCTAAGGGGTaGCATGTTAAGTTAGATATT +
Preference number: 2 (lower is better)
Translates to: CCQGLSRTPSRLTVHSFRCTAKG*HVKLDI
Trigger: AATATCTAACTTAACATGCCACCCCTTAGCAGTGCA...TCTGAAGGAATGAACGGTCAGCCGGGAAGGTGTCCGGCTTAGACCTTGACAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
3UTR-3UTR TCA 90 bp TATGTGTGCCACCAAGCTCTCGAGAGGCCATCGGCTTCAGAAGAAACTGACTTACCTCTTAAAAAGGCCTaGGTTAAAAGTTCCACTCTG +
Preference number: 2 (lower is better)
Translates to: YVCHQALERPSASEETDLPLKKA*VKSSTL
Trigger: CAGAGTGGAACTTTTAACTCAGGCCTTTTTAAGAGG...TAAGTCAGTTTCTTCTGAAGCCGATGGCCTCTCGAGAGCTTGGTGGCACACATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
3UTR-3UTR TCA 90 bp GTCTCAAAGGAGATTCTCACACAGTATGTGTGCCACCAAGCTCTCGAGAGGCCAGTAGAGGGAAAAATGTaGTCACTTACATCGCGTTTT +
Preference number: 2 (lower is better)
Translates to: VSKEILTQYVCHQALERPVEGKM*SLTSRF
Trigger: AAAACGCGATGTAAGTGATCACATTTTTCCCTCTAC...TGGCCTCTCGAGAGCTTGGTGGCACACATACTGTGTGAGAATCTCCTTTGAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
3UTR CAA 90 bp TCCCCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTGCACTaGCAGATCCCTCTTCCAATTTCAGTATTTGCAAGGTCGGTGATT +
Preference number: 2 (lower is better)
Translates to: SPKYLGGTTLTNTLH*QIPLPISVFARSVI
Trigger: AATCACCGACCTTGCAAATACTGAAATTGGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
3UTR-3UTR TCA 90 bp CCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTCCTCTTAAAAAGGCCTaGGTTAAAAGTTCCACTCTG +
Preference number: 2 (lower is better)
Translates to: PKYLGGTTLTNTLHLQIPPLKKA*VKSSTL
Trigger: CAGAGTGGAACTTTTAACTCAGGCCTTTTTAAGAGG...AGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
3UTR-3UTR CCA 90 bp ATACTTGGGAGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCTTAAAAGTTCCACTCTaGGACTTGTATCAGATTACT +
Preference number: 2 (lower is better)
Translates to: ILGRYNFNQHPALADPSSLKVPL*DLYQIT
Trigger: AGTAATCTGATACAAGTCCCAGAGTGGAACTTTTAA...GGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
3UTR-3UTR TCA 90 bp GCAGATCCCTCTTCCAATTTCAGTATTTGCAAGGTCGGTGATTTTGTTTGTTTACCTCTTAAAAAGGCCTaGGTTAAAAGTTCCACTCTG +
Preference number: 2 (lower is better)
Translates to: ADPSSNFSICKVGDFVCLPLKKA*VKSSTL
Trigger: CAGAGTGGAACTTTTAACTCAGGCCTTTTTAAGAGG...TAAACAAACAAAATCACCGACCTTGCAAATACTGAAATTGGAAGAGGGATCTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
3UTR-3UTR TCA 90 bp AGAATAAATATATCCCCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTGCCTCTTAAAAAGGCCTaGGTTAAAAGTTCCACTCTG +
Preference number: 2 (lower is better)
Translates to: RINISPKYLGGTTLTNTLPLKKA*VKSSTL
Trigger: CAGAGTGGAACTTTTAACTCAGGCCTTTTTAAGAGG...CAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGGGGATATATTTATTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
3UTR-3UTR TCA 90 bp TTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCAATTTCAGTATTTGCAAGAATCTGCAGTTATTGTaGTTCCTCTTAAAAAGGCCT +
Preference number: 2 (lower is better)
Translates to: FNQHPALADPSSNFSICKNLQLL*FLLKRP
Trigger: AGGCCTTTTTAAGAGGAATCACAATAACTGCAGATT...CTTGCAAATACTGAAATTGGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
3UTR-3UTR CCA 90 bp AGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCAATTTCAGTTTAAAAGTTCCACTCTaGGACTTGTATCAGATTACT +
Preference number: 2 (lower is better)
Translates to: RYNFNQHPALADPSSNFSLKVPL*DLYQIT
Trigger: AGTAATCTGATACAAGTCCCAGAGTGGAACTTTTAA...ACTGAAATTGGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
3UTR-3UTR GCA 90 bp TCACTTACATCGCGTTTTAACTTTCCAGGCTGCATTTATTTACACAGTTGCTTAAACTACCATTTGATATaGTTTAAGGCGCAAAAGCCG +
Preference number: 2 (lower is better)
Translates to: SLTSRFNFPGCIYLHSCLNYHLI*FKAQKP
Trigger: CGGCTTTTGCGCCTTAAAGCATATCAAATGGTAGTT...TAAGCAACTGTGTAAATAAATGCAGCCTGGAAAGTTAAAACGCGATGTAAGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
3UTR-3UTR GCA 90 bp AGAATAAATATATCCCCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTGTCCAATTTCAGTATTTaGAAGGTCGGTGATTTTGTT +
Preference number: 2 (lower is better)
Translates to: RINISPKYLGGTTLTNTLSNFSI*KVGDFV
Trigger: AACAAAATCACCGACCTTGCAAATACTGAAATTGGA...CAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGGGGATATATTTATTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
3UTR-3UTR CCA 90 bp TCACTTACATCGCGTTTTAACTTTCCAGGCTGCATTTATTTACACAGTTGCTTATTAAAAGTTCCACTCTaGGACTTGTATCAGATTACT +
Preference number: 2 (lower is better)
Translates to: SLTSRFNFPGCIYLHSCLLKVPL*DLYQIT
Trigger: AGTAATCTGATACAAGTCCCAGAGTGGAACTTTTAA...TAAGCAACTGTGTAAATAAATGCAGCCTGGAAAGTTAAAACGCGATGTAAGTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
3UTR CCA 72 bp AATGGGGGAGCGTACGTGAGGTTTTGGCTTGTTAACTaGAGGGCAGAGTGTGGAATTCTGTGCCTGGACCCT +
Preference number: 3 (lower is better)
Translates to: NGGAYVRFWLVN*RAECGILCLDP
Trigger: AGGGTCCAGGCACAGAATTCCACACTCTGCCCTCCAGTTAACAAGCCAAAACCTCACGTACGCTCCCCCATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
3UTR GCA 72 bp CATGAAGTCTCAAAGGAGATTCTCACACAGTATGTGTaGCACCAAGCTCTCGAGAGGCCATCGGCTTCAGAA +
Preference number: 3 (lower is better)
Translates to: HEVSKEILTQYV*HQALERPSASE
Trigger: TTCTGAAGCCGATGGCCTCTCGAGAGCTTGGTGGCACACATACTGTGTGAGAATCTCCTTTGAGACTTCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
3UTR-3UTR CAA 90 bp TGTTGTCAAGGTCTAAGCCGGACACCTTCCCGGCTGACCGTTCATTCCTTCAGAAAATATGGCTTTAACTaGTGTACATCTTCAGGCCAG +
Preference number: 3 (lower is better)
Translates to: CCQGLSRTPSRLTVHSFRKYGFN*CTSSGQ
Trigger: CTGGCCTGAAGATGTACACAAGTTAAAGCCATATTT...TCTGAAGGAATGAACGGTCAGCCGGGAAGGTGTCCGGCTTAGACCTTGACAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
3UTR-3UTR CAA 90 bp GGGTCGACTGATAGAGGCAGTATCTGGAATGGGAAAATCGAAAATACCTGCCACGTTCCACTCTGGGACTaGTATCAGATTACTCTCTGT +
Preference number: 3 (lower is better)
Translates to: GSTDRGSIWNGKIENTCHVPLWD*YQITLC
Trigger: ACAGAGAGTAATCTGATACAAGTCCCAGAGTGGAAC...GTGGCAGGTATTTTCGATTTTCCCATTCCAGATACTGCCTCTATCAGTCGACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
3UTR TCA 72 bp GGACTTTCAAGAAGAGTTCTAACCACTGCACATGGCTaGCAGATGGGTAGTGTCTGTTGTCAAGGTCTAAGC +
Preference number: 3 (lower is better)
Translates to: GLSRRVLTTAHG*QMGSVCCQGLS
Trigger: GCTTAGACCTTGACAACAGACACTACCCATCTGTCAGCCATGTGCAGTGGTTAGAACTCTTCTTGAAAGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
3UTR CCA 72 bp TTTAAACTTGCAAATGGGGGAGCGTACGTGAGGTTTTaGCTTGTTAACTGGAGGGCAGAGTGTGGAATTCTG +
Preference number: 3 (lower is better)
Translates to: FKLANGGAYVRF*LVNWRAECGIL
Trigger: CAGAATTCCACACTCTGCCCTCCAGTTAACAAGCCAAAACCTCACGTACGCTCCCCCATTTGCAAGTTTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
3UTR-3UTR CAA 90 bp AATGTGAGGCCAGGGCAATGTTATGCAATCCAGTCATCCAGAAGCTGTATTTTTACCAACACCCTGCACTaGCAGATCCCTCTTCCAATT +
Preference number: 3 (lower is better)
Translates to: NVRPGQCYAIQSSRSCIFTNTLH*QIPLPI
Trigger: AATTGGAAGAGGGATCTGCAAGTGCAGGGTGTTGGT...AAAAATACAGCTTCTGGATGACTGGATTGCATAACATTGCCCTGGCCTCACATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
3UTR TCA 72 bp GAGATGACTTCATTTAAGCTGCATCCTAGTACAATGTaGGGCCAGGGCAATGTTATGCAATCCAGTCATCCA +
Preference number: 3 (lower is better)
Translates to: EMTSFKLHPSTM*GQGNVMQSSHP
Trigger: TGGATGACTGGATTGCATAACATTGCCCTGGCCTCACATTGTACTAGGATGCAGCTTAAATGAAGTCATCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
3UTR-3UTR CAA 90 bp TTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCAATTTCAGTATTTGCAAGGTTCCACTCTGGGACTaGTATCAGATTACTCTCTGT +
Preference number: 3 (lower is better)
Translates to: FNQHPALADPSSNFSICKVPLWD*YQITLC
Trigger: ACAGAGAGTAATCTGATACAAGTCCCAGAGTGGAAC...CTTGCAAATACTGAAATTGGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
3UTR-3UTR CAA 90 bp AATAAATATATCCCCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTGCAGTTCCACTCTGGGACTaGTATCAGATTACTCTCTGT +
Preference number: 3 (lower is better)
Translates to: NKYIPQILGRYNFNQHPAVPLWD*YQITLC
Trigger: ACAGAGAGTAATCTGATACAAGTCCCAGAGTGGAAC...TGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGGGGATATATTTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
3UTR TCA 72 bp GATATTGAAAATGCACTGTCTGAGCTAACTACCATTTaGTATGCTTTAAGGCGCAAAAGCCGACCCTTAGTT +
Preference number: 3 (lower is better)
Translates to: DIENALSELTTI*YALRRKSRPLV
Trigger: AACTAAGGGTCGGCTTTTGCGCCTTAAAGCATATCAAATGGTAGTTAGCTCAGACAGTGCATTTTCAATATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
3UTR CCA 72 bp TTCCTCTTAAAAAGGCCTGAGTTAAAAGTTCCACTCTaGGACTTGTATCAGATTACTCTCTGTAGCAGAATC +
Preference number: 3 (lower is better)
Translates to: FLLKRPELKVPL*DLYQITLCSRI
Trigger: GATTCTGCTACAGAGAGTAATCTGATACAAGTCCCAGAGTGGAACTTTTAACTCAGGCCTTTTTAAGAGGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
3UTR-3UTR CAA 90 bp CAGGCAAATGCATCCTCAGAGCTTTGCTGCATCTTTGCTATTAATTCTTATTTTATATCCCCCAAATACTaGGGAGGTACAACTTTAACC +
Preference number: 3 (lower is better)
Translates to: QANASSELCCIFAINSYFISPKY*GGTTLT
Trigger: GGTTAAAGTTGTACCTCCCAAGTATTTGGGGGATAT...AAAATAAGAATTAATAGCAAAGATGCAGCAAAGCTCTGAGGATGCATTTGCCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
3UTR TCA 72 bp AAATCTGCAGTTATTGTGATTCCTCTTAAAAAGGCCTaGGTTAAAAGTTCCACTCTGGGACTTGTATCAGAT +
Preference number: 3 (lower is better)
Translates to: KSAVIVIPLKKA*VKSSTLGLVSD
Trigger: ATCTGATACAAGTCCCAGAGTGGAACTTTTAACTCAGGCCTTTTTAAGAGGAATCACAATAACTGCAGATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR TCA 90 bp TGTTGTCAAGGTCTAAGCCGGACACCTTCCCGGCTGACCGTTCATTCCTTCAGATGGCAGCTGAGCCGTTaGGGAAGGTGGGGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: CCQGLSRTPSRLTVHSFRWQLSR*GRWGSR
Trigger: GCGGCTCCCCCACCTTCCTCAACGGCTCAGCTGCCA...TCTGAAGGAATGAACGGTCAGCCGGGAAGGTGTCCGGCTTAGACCTTGACAACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR GCA 90 bp CTTGGGAGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCAATAGCACCCCGGCGCCCTaGATCCACGTCCGCACCGCG +
Preference number: 4 (lower is better)
Translates to: LGRYNFNQHPALADPSSNSTPAP*IHVRTA
Trigger: CGCGGTGCGGACGTGGATGCAGGGCGCCGGGGTGCT...ATTGGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
CDS-3UTR CCA 90 bp GGTTTTGGCTTGTTAACTGGAGGGCAGAGTGTGGAATTCTGTGCCTGGACCCTGGGAGGTGGGGAGGTCTaGGGTCTGACGACTGGTGCG +
Preference number: 4 (lower is better)
Translates to: GFGLLTGGQSVEFCAWTLGGGEV*GLTTGA
Trigger: CGCACCAGTCGTCAGACCCCAGACCTCCCCACCTCC...CAGGGTCCAGGCACAGAATTCCACACTCTGCCCTCCAGTTAACAAGCCAAAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR GCA 90 bp TGTTGTCAAGGTCTAAGCCGGACACCTTCCCGGCTGACCGTTCATTCCTTCAGATCTGCTGGGGAGTGGTaGTCGGCACGTACCCGTGTG +
Preference number: 4 (lower is better)
Translates to: CCQGLSRTPSRLTVHSFRSAGEW*SARTRV
Trigger: CACACGGGTACGTGCCGAGCACCACTCCCCAGCAGA...TCTGAAGGAATGAACGGTCAGCCGGGAAGGTGTCCGGCTTAGACCTTGACAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR TCA 90 bp CCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTTGGCAGCTGAGCCGTTaGGGAAGGTGGGGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: PKYLGGTTLTNTLHLQIPWQLSR*GRWGSR
Trigger: GCGGCTCCCCCACCTTCCTCAACGGCTCAGCTGCCA...AGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000622875.4
CDS-3UTR GCA 90 bp AGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCAATTTCAGTAGACCCACCCCGCTCTaGGCCGCCGTGTTGGCGTCC +
Preference number: 4 (lower is better)
Translates to: RYNFNQHPALADPSSNFSRPTPL*AAVLAS
Trigger: GGACGCCAACACGGCGGCGCAGAGCGGGGTGGGTCT...ACTGAAATTGGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
CDS-3UTR GCA 90 bp TATGTGTGCCACCAAGCTCTCGAGAGGCCATCGGCTTCAGAAGAAACTGACTTATGCCCGAGGAGCTGCTaGAGTTGGAGGGGAGGCTTG +
Preference number: 4 (lower is better)
Translates to: YVCHQALERPSASEETDLCPRSC*SWRGGL
Trigger: CAAGCCTCCCCTCCAACTGCAGCAGCTCCTCGGGCA...TAAGTCAGTTTCTTCTGAAGCCGATGGCCTCTCGAGAGCTTGGTGGCACACATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR GCA 90 bp TATGTGTGCCACCAAGCTCTCGAGAGGCCATCGGCTTCAGAAGAAACTGACTTAGGCTGTTCCCGTTGGTaGTGGTGCAGGTGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: YVCHQALERPSASEETDLGCSRW*WCRWEV
Trigger: CACCTCCCACCTGCACCAGCACCAACGGGAACAGCC...TAAGTCAGTTTCTTCTGAAGCCGATGGCCTCTCGAGAGCTTGGTGGCACACATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR CCA 90 bp TTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCAATTTCAGTATTTGCAAGTCTGCGCCGCCGTGTTaGCGTCCAGCACCCCGGCGC +
Preference number: 4 (lower is better)
Translates to: FNQHPALADPSSNFSICKSAPPC*RPAPRR
Trigger: GCGCCGGGGTGCTGGACGCCAACACGGCGGCGCAGA...CTTGCAAATACTGAAATTGGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
CDS-3UTR TCA 90 bp TGTTGTCAAGGTCTAAGCCGGACACCTTCCCGGCTGACCGTTCATTCCTTCAGACAGGGTGCCGAGGAATaGCCTTCTGTAACCTCTGGA +
Preference number: 4 (lower is better)
Translates to: CCQGLSRTPSRLTVHSFRQGAEE*PSVTSG
Trigger: TCCAGAGGTTACAGAAGGTCATTCCTCGGCACCCTG...TCTGAAGGAATGAACGGTCAGCCGGGAAGGTGTCCGGCTTAGACCTTGACAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR GCA 90 bp TTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCAATTTCAGTATTTGCAAGAGACCCACCCCGCTCTaGGCCGCCGTGTTGGCGTCC +
Preference number: 4 (lower is better)
Translates to: FNQHPALADPSSNFSICKRPTPL*AAVLAS
Trigger: GGACGCCAACACGGCGGCGCAGAGCGGGGTGGGTCT...CTTGCAAATACTGAAATTGGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
CDS-3UTR GCA 90 bp GGTTTTGGCTTGTTAACTGGAGGGCAGAGTGTGGAATTCTGTGCCTGGACCCTGTCAGGGTCACCAGGGTaGCGAGGAATGACCTTCTGT +
Preference number: 4 (lower is better)
Translates to: GFGLLTGGQSVEFCAWTLSGSPG*RGMTFC
Trigger: ACAGAAGGTCATTCCTCGGCACCCTGGTGACCCTGA...CAGGGTCCAGGCACAGAATTCCACACTCTGCCCTCCAGTTAACAAGCCAAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR GCA 90 bp ATACTTGGGAGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCTCTGCTGGGGAGTGGTaGTCGGCACGTACCCGTGTG +
Preference number: 4 (lower is better)
Translates to: ILGRYNFNQHPALADPSSSAGEW*SARTRV
Trigger: CACACGGGTACGTGCCGAGCACCACTCCCCAGCAGA...GGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000622875.4
CDS-3UTR GCA 90 bp CCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTTGCCCGAGGAGCTGCTaGAGTTGGAGGGGAGGCTTG +
Preference number: 4 (lower is better)
Translates to: PKYLGGTTLTNTLHLQIPCPRSC*SWRGGL
Trigger: CAAGCCTCCCCTCCAACTGCAGCAGCTCCTCGGGCA...AGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR GCA 90 bp GGGTCGACTGATAGAGGCAGTATCTGGAATGGGAAAATCGAAAATACCTGCCACAGATGCCCGAGGAGCTaGTGCAGTTGGAGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: GSTDRGSIWNGKIENTCHRCPRS*CSWRGG
Trigger: GCCTCCCCTCCAACTGCAGCAGCTCCTCGGGCATCT...GTGGCAGGTATTTTCGATTTTCCCATTCCAGATACTGCCTCTATCAGTCGACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR GCA 90 bp CCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTAGATGCCCGAGGAGCTaGTGCAGTTGGAGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: PKYLGGTTLTNTLHLQIPRCPRS*CSWRGG
Trigger: GCCTCCCCTCCAACTGCAGCAGCTCCTCGGGCATCT...AGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR CCA 90 bp GTCTCAAAGGAGATTCTCACACAGTATGTGTGCCACCAAGCTCTCGAGAGGCCAGGCTGGATGGCACTATaGCATAGGGGGAGTTGGCAG +
Preference number: 4 (lower is better)
Translates to: VSKEILTQYVCHQALERPGWMAL*HRGSWQ
Trigger: CTGCCAACTCCCCCTATGCCATAGTGCCATCCAGCC...TGGCCTCTCGAGAGCTTGGTGGCACACATACTGTGTGAGAATCTCCTTTGAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR CCA 90 bp GTCTCAAAGGAGATTCTCACACAGTATGTGTGCCACCAAGCTCTCGAGAGGCCACATGGTGGGGCTGGATaGCACTATGGCATAGGGGGA +
Preference number: 4 (lower is better)
Translates to: VSKEILTQYVCHQALERPHGGAG*HYGIGG
Trigger: TCCCCCTATGCCATAGTGCCATCCAGCCCCACCATG...TGGCCTCTCGAGAGCTTGGTGGCACACATACTGTGTGAGAATCTCCTTTGAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR CCA 90 bp CCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTGCAGGCTGTTCCCGTTaGTGCTGGTGCAGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: PKYLGGTTLTNTLHLQIPAGCSR*CWCRWE
Trigger: CTCCCACCTGCACCAGCACCAACGGGAACAGCCTGC...AGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR TCA 90 bp GGTTTTGGCTTGTTAACTGGAGGGCAGAGTGTGGAATTCTGTGCCTGGACCCTGTGCTTGAGTTGCGGGTaGAACCCTGATTGGTGGCTT +
Preference number: 4 (lower is better)
Translates to: GFGLLTGGQSVEFCAWTLCLSCG*NPDWWL
Trigger: AAGCCACCAATCAGGGTTTCACCCGCAACTCAAGCA...CAGGGTCCAGGCACAGAATTCCACACTCTGCCCTCCAGTTAACAAGCCAAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR TCA 90 bp AGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCAATTTCAGTGGGGGAGTTGGCAGCTaGGCCGTTGAGGAAGGTGGG +
Preference number: 4 (lower is better)
Translates to: RYNFNQHPALADPSSNFSGGVGS*AVEEGG
Trigger: CCCACCTTCCTCAACGGCTCAGCTGCCAACTCCCCC...ACTGAAATTGGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000622875.4
CDS-3UTR GCA 90 bp CTCTTAAAAAGGCCTGAGTTAAAAGTTCCACTCTGGGACTTGTATCAGATTACTAGCACCCCGGCGCCCTaGATCCACGTCCGCACCGCG +
Preference number: 4 (lower is better)
Translates to: LLKRPELKVPLWDLYQITSTPAP*IHVRTA
Trigger: CGCGGTGCGGACGTGGATGCAGGGCGCCGGGGTGCT...AGTAATCTGATACAAGTCCCAGAGTGGAACTTTTAACTCAGGCCTTTTTAAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
CDS-3UTR GCA 90 bp CTTGGGAGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCAATCACGCCCATCATCCCTaGGTGGACCGAGGTGTTAGC +
Preference number: 4 (lower is better)
Translates to: LGRYNFNQHPALADPSSNHAHHP*VDRGVS
Trigger: GCTAACACCTCGGTCCACGCAGGGATGATGGGCGTG...ATTGGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR CCA 90 bp CCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTGCAAGGGCCGGGAGTTaGTTGTGGTTGCGGGGAACA +
Preference number: 4 (lower is better)
Translates to: PKYLGGTTLTNTLHLQIPARAGS*LWLRGT
Trigger: TGTTCCCCGCAACCACAACCAACTCCCGGCCCTTGC...AGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR CCA 90 bp CCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTAGGAGCTGCTGCAGTTaGAGGGGAGGCTTGTGGAGG +
Preference number: 4 (lower is better)
Translates to: PKYLGGTTLTNTLHLQIPRSCCS*RGGLWR
Trigger: CCTCCACAAGCCTCCCCTCCAACTGCAGCAGCTCCT...AGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR CCA 90 bp AGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCAATTTCAGTGGAGGTGGGGAGGTCTaGGGTCTGACGACTGGTGCG +
Preference number: 4 (lower is better)
Translates to: RYNFNQHPALADPSSNFSGGGEV*GLTTGA
Trigger: CGCACCAGTCGTCAGACCCCAGACCTCCCCACCTCC...ACTGAAATTGGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR TCA 90 bp GGTTTTGGCTTGTTAACTGGAGGGCAGAGTGTGGAATTCTGTGCCTGGACCCTGCGTTCATGCTCGTGGTaGCGGAGTTATAGTTGGTCT +
Preference number: 4 (lower is better)
Translates to: GFGLLTGGQSVEFCAWTLRSCSW*RSYSWS
Trigger: AGACCAACTATAACTCCGTCACCACGAGCATGAACG...CAGGGTCCAGGCACAGAATTCCACACTCTGCCCTCCAGTTAACAAGCCAAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR TCA 90 bp AATGTGAGGCCAGGGCAATGTTATGCAATCCAGTCATCCAGAAGCTGTATTTTTGGGGGAGTTGGCAGCTaGGCCGTTGAGGAAGGTGGG +
Preference number: 4 (lower is better)
Translates to: NVRPGQCYAIQSSRSCIFGGVGS*AVEEGG
Trigger: CCCACCTTCCTCAACGGCTCAGCTGCCAACTCCCCC...AAAAATACAGCTTCTGGATGACTGGATTGCATAACATTGCCCTGGCCTCACATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR TCA 90 bp TATGTGTGCCACCAAGCTCTCGAGAGGCCATCGGCTTCAGAAGAAACTGACTTAGGACACCTTCCCGGCTaGCCGTTCATTCCTTCAGAA +
Preference number: 4 (lower is better)
Translates to: YVCHQALERPSASEETDLGHLPG*PFIPSE
Trigger: TTCTGAAGGAATGAACGGTCAGCCGGGAAGGTGTCC...TAAGTCAGTTTCTTCTGAAGCCGATGGCCTCTCGAGAGCTTGGTGGCACACATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR GCA 90 bp CTCTCTGTAGCAGAATCCAACCTCTTCATTAATACAATTCTTCAAGGCAATTCTAGCACCCCGGCGCCCTaGATCCACGTCCGCACCGCG +
Preference number: 4 (lower is better)
Translates to: LSVAESNLFINTILQGNSSTPAP*IHVRTA
Trigger: CGCGGTGCGGACGTGGATGCAGGGCGCCGGGGTGCT...AGAATTGCCTTGAAGAATTGTATTAATGAAGAGGTTGGATTCTGCTACAGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
CDS-3UTR GCA 90 bp CAGAATAAATATATCCCCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTAGACCCACCCCGCTCTaGGCCGCCGTGTTGGCGTCC +
Preference number: 4 (lower is better)
Translates to: QNKYIPQILGRYNFNQHPRPTPL*AAVLAS
Trigger: GGACGCCAACACGGCGGCGCAGAGCGGGGTGGGTCT...AGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGGGGATATATTTATTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
CDS-3UTR GCA 90 bp CCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTACAACACCAGGGATGTaGCGAGGAGGGGTCTGCACA +
Preference number: 4 (lower is better)
Translates to: PKYLGGTTLTNTLHLQIPTTPGM*RGGVCT
Trigger: TGTGCAGACCCCTCCTCGGCACATCCCTGGTGTTGT...AGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR GCA 90 bp ATACTTGGGAGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCACAACACCAGGGATGTaGCGAGGAGGGGTCTGCACA +
Preference number: 4 (lower is better)
Translates to: ILGRYNFNQHPALADPSSTTPGM*RGGVCT
Trigger: TGTGCAGACCCCTCCTCGGCACATCCCTGGTGTTGT...GGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR GCA 90 bp TATGTGTGCCACCAAGCTCTCGAGAGGCCATCGGCTTCAGAAGAAACTGACTTAGTGAGAAGGAGAAGATaGCCGAGGAGCTGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: YVCHQALERPSASEETDLVRRRR*PRSCCS
Trigger: ACTGCAGCAGCTCCTCGGGCATCTTCTCCTTCTCAC...TAAGTCAGTTTCTTCTGAAGCCGATGGCCTCTCGAGAGCTTGGTGGCACACATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR CCA 90 bp CTCTCTGTAGCAGAATCCAACCTCTTCATTAATACAATTCTTCAAGGCAATTCTTCTGCGCCGCCGTGTTaGCGTCCAGCACCCCGGCGC +
Preference number: 4 (lower is better)
Translates to: LSVAESNLFINTILQGNSSAPPC*RPAPRR
Trigger: GCGCCGGGGTGCTGGACGCCAACACGGCGGCGCAGA...AGAATTGCCTTGAAGAATTGTATTAATGAAGAGGTTGGATTCTGCTACAGAGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
CDS-3UTR CCA 90 bp TATGTGTGCCACCAAGCTCTCGAGAGGCCATCGGCTTCAGAAGAAACTGACTTACTGGGGTCTGACGACTaGTGCGAAAGCACTCTTCTG +
Preference number: 4 (lower is better)
Translates to: YVCHQALERPSASEETDLLGSDD*CESTLL
Trigger: CAGAAGAGTGCTTTCGCACCAGTCGTCAGACCCCAG...TAAGTCAGTTTCTTCTGAAGCCGATGGCCTCTCGAGAGCTTGGTGGCACACATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR CCA 90 bp TTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCAATTTCAGTATTTGCAAGGGAGGTGGGGAGGTCTaGGGTCTGACGACTGGTGCG +
Preference number: 4 (lower is better)
Translates to: FNQHPALADPSSNFSICKGGGEV*GLTTGA
Trigger: CGCACCAGTCGTCAGACCCCAGACCTCCCCACCTCC...CTTGCAAATACTGAAATTGGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR CCA 90 bp AGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCAATTTCAGTGCAGGCTGTTCCCGTTaGTGCTGGTGCAGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: RYNFNQHPALADPSSNFSAGCSR*CWCRWE
Trigger: CTCCCACCTGCACCAGCACCAACGGGAACAGCCTGC...ACTGAAATTGGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR TCA 90 bp TATGTGTGCCACCAAGCTCTCGAGAGGCCATCGGCTTCAGAAGAAACTGACTTAGGATGGCATGAGGAGTaGTCAACTCACTCCAGACCA +
Preference number: 4 (lower is better)
Translates to: YVCHQALERPSASEETDLGWHEE*STHSRP
Trigger: TGGTCTGGAGTGAGTTGATCACTCCTCATGCCATCC...TAAGTCAGTTTCTTCTGAAGCCGATGGCCTCTCGAGAGCTTGGTGGCACACATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR TCA 90 bp CCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTCGGCCAGTTGTCCACTaGACGAATTCACGCCCATCA +
Preference number: 4 (lower is better)
Translates to: PKYLGGTTLTNTLHLQIPRPVVH*TNSRPS
Trigger: TGATGGGCGTGAATTCGTTCAGTGGACAACTGGCCG...AGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR TCA 90 bp CTTGGGAGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCAATCGGCCAGTTGTCCACTaGACGAATTCACGCCCATCA +
Preference number: 4 (lower is better)
Translates to: LGRYNFNQHPALADPSSNRPVVH*TNSRPS
Trigger: TGATGGGCGTGAATTCGTTCAGTGGACAACTGGCCG...ATTGGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR TCA 90 bp GGGTCGACTGATAGAGGCAGTATCTGGAATGGGAAAATCGAAAATACCTGCCACCGGCCAGTTGTCCACTaGACGAATTCACGCCCATCA +
Preference number: 4 (lower is better)
Translates to: GSTDRGSIWNGKIENTCHRPVVH*TNSRPS
Trigger: TGATGGGCGTGAATTCGTTCAGTGGACAACTGGCCG...GTGGCAGGTATTTTCGATTTTCCCATTCCAGATACTGCCTCTATCAGTCGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR TCA 90 bp CTTGGGAGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCAATTTGCGGGTGAAACCCTaGTTGGTGGCTTGTGATGCC +
Preference number: 4 (lower is better)
Translates to: LGRYNFNQHPALADPSSNLRVKP*LVACDA
Trigger: GGCATCACAAGCCACCAATCAGGGTTTCACCCGCAA...ATTGGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000622875.4
CDS-3UTR TCA 90 bp CTTGGGAGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCAATCTGGATGGCACTACCTaGTTGGTGGCTTGTGATGCC +
Preference number: 4 (lower is better)
Translates to: LGRYNFNQHPALADPSSNLDGTT*LVACDA
Trigger: GGCATCACAAGCCACCAATCAGGTAGTGCCATCCAG...ATTGGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517373.1
CDS-3UTR GCA 90 bp GGGTCGACTGATAGAGGCAGTATCTGGAATGGGAAAATCGAAAATACCTGCCACGCGGCTCTTCCTTCATaGTGCTTCCACTCCGTTGGA +
Preference number: 4 (lower is better)
Translates to: GSTDRGSIWNGKIENTCHAALPS*CFHSVG
Trigger: TCCAACGGAGTGGAAGCAGCATGAAGGAAGAGCCGC...GTGGCAGGTATTTTCGATTTTCCCATTCCAGATACTGCCTCTATCAGTCGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313708.11
CDS-3UTR GCA 90 bp GTCTCAAAGGAGATTCTCACACAGTATGTGTGCCACCAAGCTCTCGAGAGGCCACGAGCCCTCCGCCCATaGTTGGAATTATTATGGACA +
Preference number: 4 (lower is better)
Translates to: VSKEILTQYVCHQALERPRALRP*LELLWT
Trigger: TGTCCATAATAATTCCAAGCATGGGCGGAGGGCTCG...TGGCCTCTCGAGAGCTTGGTGGCACACATACTGTGTGAGAATCTCCTTTGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR GCA 90 bp CCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTTCAGGGTCACCAGGGTaGCGAGGAATGACCTTCTGT +
Preference number: 4 (lower is better)
Translates to: PKYLGGTTLTNTLHLQIPSGSPG*RGMTFC
Trigger: ACAGAAGGTCATTCCTCGGCACCCTGGTGACCCTGA...AGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR GCA 90 bp TATGTGTGCCACCAAGCTCTCGAGAGGCCATCGGCTTCAGAAGAAACTGACTTATGGCATCCCATACAGTaGTTCTACCAGATCCGCAGC +
Preference number: 4 (lower is better)
Translates to: YVCHQALERPSASEETDLWHPIQ*FYQIRS
Trigger: GCTGCGGATCTGGTAGAAGCACTGTATGGGATGCCA...TAAGTCAGTTTCTTCTGAAGCCGATGGCCTCTCGAGAGCTTGGTGGCACACATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR GCA 90 bp GGGTCGACTGATAGAGGCAGTATCTGGAATGGGAAAATCGAAAATACCTGCCACGGAGTTGGTTGTGGTTaGGGGGAACACTGTACAGGG +
Preference number: 4 (lower is better)
Translates to: GSTDRGSIWNGKIENTCHGVGCG*GEHCTG
Trigger: CCCTGTACAGTGTTCCCCGCAACCACAACCAACTCC...GTGGCAGGTATTTTCGATTTTCCCATTCCAGATACTGCCTCTATCAGTCGACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR GCA 90 bp AGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCAATTTCAGTCACGCCCATCATCCCTaGGTGGACCGAGGTGTTAGC +
Preference number: 4 (lower is better)
Translates to: RYNFNQHPALADPSSNFSHAHHP*VDRGVS
Trigger: GCTAACACCTCGGTCCACGCAGGGATGATGGGCGTG...ACTGAAATTGGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR GCA 90 bp TTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCAATTTCAGTATTTGCAAGTCTGCTGGGGAGTGGTaGTCGGCACGTACCCGTGTG +
Preference number: 4 (lower is better)
Translates to: FNQHPALADPSSNFSICKSAGEW*SARTRV
Trigger: CACACGGGTACGTGCCGAGCACCACTCCCCAGCAGA...CTTGCAAATACTGAAATTGGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000622875.4
CDS-3UTR GCA 90 bp TTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCAATTTCAGTATTTGCAAGAGATGCCCGAGGAGCTaGTGCAGTTGGAGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: FNQHPALADPSSNFSICKRCPRS*CSWRGG
Trigger: GCCTCCCCTCCAACTGCAGCAGCTCCTCGGGCATCT...CTTGCAAATACTGAAATTGGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR GCA 90 bp GGGTCGACTGATAGAGGCAGTATCTGGAATGGGAAAATCGAAAATACCTGCCACGTGAGAAGGAGAAGATaGCCGAGGAGCTGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: GSTDRGSIWNGKIENTCHVRRRR*PRSCCS
Trigger: ACTGCAGCAGCTCCTCGGGCATCTTCTCCTTCTCAC...GTGGCAGGTATTTTCGATTTTCCCATTCCAGATACTGCCTCTATCAGTCGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR GCA 90 bp GGTTTTGGCTTGTTAACTGGAGGGCAGAGTGTGGAATTCTGTGCCTGGACCCTGAAGAGTTCTAACCACTaGACATGGCTGACAGATGGG +
Preference number: 4 (lower is better)
Translates to: GFGLLTGGQSVEFCAWTLKSSNH*TWLTDG
Trigger: CCCATCTGTCAGCCATGTGCAGTGGTTAGAACTCTT...CAGGGTCCAGGCACAGAATTCCACACTCTGCCCTCCAGTTAACAAGCCAAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR CCA 90 bp TGTTGTCAAGGTCTAAGCCGGACACCTTCCCGGCTGACCGTTCATTCCTTCAGAGAGTATTACTTCCTTTaGCAAACGCTCAGGGTCACC +
Preference number: 4 (lower is better)
Translates to: CCQGLSRTPSRLTVHSFREYYFL*QTLRVT
Trigger: GGTGACCCTGAGCGTTTGCCAAAGGAAGTAATACTC...TCTGAAGGAATGAACGGTCAGCCGGGAAGGTGTCCGGCTTAGACCTTGACAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR CCA 90 bp AGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCAATTTCAGTGCAAGGGCCGGGAGTTaGTTGTGGTTGCGGGGAACA +
Preference number: 4 (lower is better)
Translates to: RYNFNQHPALADPSSNFSARAGS*LWLRGT
Trigger: TGTTCCCCGCAACCACAACCAACTCCCGGCCCTTGC...ACTGAAATTGGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR CCA 90 bp AGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCAATTTCAGTGGGAGCCGCCCAAATTaGACATTGCGGCAGAGCCGT +
Preference number: 4 (lower is better)
Translates to: RYNFNQHPALADPSSNFSGSRPN*TLRQSR
Trigger: ACGGCTCTGCCGCAATGTCCAATTTGGGCGGCTCCC...ACTGAAATTGGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000622875.4
CDS-3UTR CCA 90 bp AGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCAATTTCAGTAGGAGCTGCTGCAGTTaGAGGGGAGGCTTGTGGAGG +
Preference number: 4 (lower is better)
Translates to: RYNFNQHPALADPSSNFSRSCCS*RGGLWR
Trigger: CCTCCACAAGCCTCCCCTCCAACTGCAGCAGCTCCT...ACTGAAATTGGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR CCA 90 bp GGGTCGACTGATAGAGGCAGTATCTGGAATGGGAAAATCGAAAATACCTGCCACCTGGGGTCTGACGACTaGTGCGAAAGCACTCTTCTG +
Preference number: 4 (lower is better)
Translates to: GSTDRGSIWNGKIENTCHLGSDD*CESTLL
Trigger: CAGAAGAGTGCTTTCGCACCAGTCGTCAGACCCCAG...GTGGCAGGTATTTTCGATTTTCCCATTCCAGATACTGCCTCTATCAGTCGACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR CCA 90 bp AATGTGAGGCCAGGGCAATGTTATGCAATCCAGTCATCCAGAAGCTGTATTTTTGCAGGCTGTTCCCGTTaGTGCTGGTGCAGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: NVRPGQCYAIQSSRSCIFAGCSR*CWCRWE
Trigger: CTCCCACCTGCACCAGCACCAACGGGAACAGCCTGC...AAAAATACAGCTTCTGGATGACTGGATTGCATAACATTGCCCTGGCCTCACATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR TCA 90 bp GGTTTTGGCTTGTTAACTGGAGGGCAGAGTGTGGAATTCTGTGCCTGGACCCTGGCATGGTACCGAATATaGCCTGTAACCCATCAAAGA +
Preference number: 4 (lower is better)
Translates to: GFGLLTGGQSVEFCAWTLAWYRI*PVTHQR
Trigger: TCTTTGATGGGTTACAGGTCATATTCGGTACCATGC...CAGGGTCCAGGCACAGAATTCCACACTCTGCCCTCCAGTTAACAAGCCAAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR TCA 90 bp CCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTGGATGGCATGAGGAGTaGTCAACTCACTCCAGACCA +
Preference number: 4 (lower is better)
Translates to: PKYLGGTTLTNTLHLQIPGWHEE*STHSRP
Trigger: TGGTCTGGAGTGAGTTGATCACTCCTCATGCCATCC...AGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR TCA 90 bp CCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTCTGATTGGTGGCTTGTaGTGCCTCGGAGACATTCAC +
Preference number: 4 (lower is better)
Translates to: PKYLGGTTLTNTLHLQIPLIGGL*CLGDIH
Trigger: GTGAATGTCTCCGAGGCATCACAAGCCACCAATCAG...AGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR TCA 90 bp CCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTTGCTTGAGTTGCGGGTaGAACCCTGATTGGTGGCTT +
Preference number: 4 (lower is better)
Translates to: PKYLGGTTLTNTLHLQIPCLSCG*NPDWWL
Trigger: AAGCCACCAATCAGGGTTTCACCCGCAACTCAAGCA...AGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000622875.4
CDS-3UTR TCA 90 bp TCACTTACATCGCGTTTTAACTTTCCAGGCTGCATTTATTTACACAGTTGCTTATGGCAGCTGAGCCGTTaGGGAAGGTGGGGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: SLTSRFNFPGCIYLHSCLWQLSR*GRWGSR
Trigger: GCGGCTCCCCCACCTTCCTCAACGGCTCAGCTGCCA...TAAGCAACTGTGTAAATAAATGCAGCCTGGAAAGTTAAAACGCGATGTAAGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR TCA 90 bp CTTGGGAGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCAATACCACTGCACATGGCTaGCAGATGGGTAGTGTCTGT +
Preference number: 4 (lower is better)
Translates to: LGRYNFNQHPALADPSSNTTAHG*QMGSVC
Trigger: ACAGACACTACCCATCTGTCAGCCATGTGCAGTGGT...ATTGGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR GCA 90 bp GGGTCGACTGATAGAGGCAGTATCTGGAATGGGAAAATCGAAAATACCTGCCACTGGCATCCCATACAGTaGTTCTACCAGATCCGCAGC +
Preference number: 4 (lower is better)
Translates to: GSTDRGSIWNGKIENTCHWHPIQ*FYQIRS
Trigger: GCTGCGGATCTGGTAGAAGCACTGTATGGGATGCCA...GTGGCAGGTATTTTCGATTTTCCCATTCCAGATACTGCCTCTATCAGTCGACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR CCA 90 bp GGTTTTGGCTTGTTAACTGGAGGGCAGAGTGTGGAATTCTGTGCCTGGACCCTGTTAGAGATGTATGCTTaGCTGTTGGGGGTTGTTTGG +
Preference number: 4 (lower is better)
Translates to: GFGLLTGGQSVEFCAWTLLEMYA*LLGVVW
Trigger: CCAAACAACCCCCAACAGCCAAGCATACATCTCTAA...CAGGGTCCAGGCACAGAATTCCACACTCTGCCCTCCAGTTAACAAGCCAAAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000313708.11
CDS-3UTR CCA 90 bp CCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTGTAGACACCACGACCTaGAATCTCCGCATGTCACGT +
Preference number: 4 (lower is better)
Translates to: PKYLGGTTLTNTLHLQIPVDTTT*NLRMSR
Trigger: ACGTGACATGCGGAGATTCCAGGTCGTGGTGTCTAC...AGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR CCA 90 bp GTCTCAAAGGAGATTCTCACACAGTATGTGTGCCACCAAGCTCTCGAGAGGCCATTCCTGGTTGTTGTGTaGCATCCCATACAGTGCTTC +
Preference number: 4 (lower is better)
Translates to: VSKEILTQYVCHQALERPFLVVV*HPIQCF
Trigger: GAAGCACTGTATGGGATGCCACACAACAACCAGGAA...TGGCCTCTCGAGAGCTTGGTGGCACACATACTGTGTGAGAATCTCCTTTGAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR CCA 90 bp TTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCAATTTCAGTATTTGCAAGGCAAGGGCCGGGAGTTaGTTGTGGTTGCGGGGAACA +
Preference number: 4 (lower is better)
Translates to: FNQHPALADPSSNFSICKARAGS*LWLRGT
Trigger: TGTTCCCCGCAACCACAACCAACTCCCGGCCCTTGC...CTTGCAAATACTGAAATTGGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR CCA 90 bp AGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCAATTTCAGTCCCATCATCCCTGCGTaGACCGAGGTGTTAGCAAGG +
Preference number: 4 (lower is better)
Translates to: RYNFNQHPALADPSSNFSPIIPA*TEVLAR
Trigger: CCTTGCTAACACCTCGGTCCACGCAGGGATGATGGG...ACTGAAATTGGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR CCA 90 bp CAGAATAAATATATCCCCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTGGAGGTGGGGAGGTCTaGGGTCTGACGACTGGTGCG +
Preference number: 4 (lower is better)
Translates to: QNKYIPQILGRYNFNQHPGGGEV*GLTTGA
Trigger: CGCACCAGTCGTCAGACCCCAGACCTCCCCACCTCC...AGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGGGGATATATTTATTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR TCA 90 bp CTCTCTGTAGCAGAATCCAACCTCTTCATTAATACAATTCTTCAAGGCAATTCTGGGGGAGTTGGCAGCTaGGCCGTTGAGGAAGGTGGG +
Preference number: 4 (lower is better)
Translates to: LSVAESNLFINTILQGNSGGVGS*AVEEGG
Trigger: CCCACCTTCCTCAACGGCTCAGCTGCCAACTCCCCC...AGAATTGCCTTGAAGAATTGTATTAATGAAGAGGTTGGATTCTGCTACAGAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000622875.4
CDS-3UTR TCA 90 bp TGTTGTCAAGGTCTAAGCCGGACACCTTCCCGGCTGACCGTTCATTCCTTCAGACCTCTTAAAAAGGCCTaGGTTAAAAGTTCCACTCTG +
Preference number: 4 (lower is better)
Translates to: CCQGLSRTPSRLTVHSFRPLKKA*VKSSTL
Trigger: CAGAGTGGAACTTTTAACTCAGGCCTTTTTAAGAGG...TCTGAAGGAATGAACGGTCAGCCGGGAAGGTGTCCGGCTTAGACCTTGACAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR TCA 90 bp GGGTCGACTGATAGAGGCAGTATCTGGAATGGGAAAATCGAAAATACCTGCCACATGGGGGAGCGTACGTaGGGTTTTGGCTTGTTAACT +
Preference number: 4 (lower is better)
Translates to: GSTDRGSIWNGKIENTCHMGERT*GFGLLT
Trigger: AGTTAACAAGCCAAAACCTCACGTACGCTCCCCCAT...GTGGCAGGTATTTTCGATTTTCCCATTCCAGATACTGCCTCTATCAGTCGACCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR TCA 90 bp GGTTTTGGCTTGTTAACTGGAGGGCAGAGTGTGGAATTCTGTGCCTGGACCCTGAATGTTAGTGATGACTaGCAGTTCTGGTGCACAGTT +
Preference number: 4 (lower is better)
Translates to: GFGLLTGGQSVEFCAWTLNVSDD*QFWCTV
Trigger: AACTGTGCACCAGAACTGTCAGTCATCACTAACATT...CAGGGTCCAGGCACAGAATTCCACACTCTGCCCTCCAGTTAACAAGCCAAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR GCA 90 bp ATACTTGGGAGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCCATGTTATCAGAGACTaGCAGGACATGGCCATCCAC +
Preference number: 4 (lower is better)
Translates to: ILGRYNFNQHPALADPSSHVIRD*QDMAIH
Trigger: GTGGATGGCCATGTCCTGGCAGTCTCTGATAACATG...GGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR GCA 90 bp TTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCAATTTCAGTATTTGCAAGACAACACCAGGGATGTaGCGAGGAGGGGTCTGCACA +
Preference number: 4 (lower is better)
Translates to: FNQHPALADPSSNFSICKTTPGM*RGGVCT
Trigger: TGTGCAGACCCCTCCTCGGCACATCCCTGGTGTTGT...CTTGCAAATACTGAAATTGGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR GCA 90 bp GCAGATCCCTCTTCCAATTTCAGTATTTGCAAGGTCGGTGATTTTGTTTGTTTATGCCCGAGGAGCTGCTaGAGTTGGAGGGGAGGCTTG +
Preference number: 4 (lower is better)
Translates to: ADPSSNFSICKVGDFVCLCPRSC*SWRGGL
Trigger: CAAGCCTCCCCTCCAACTGCAGCAGCTCCTCGGGCA...TAAACAAACAAAATCACCGACCTTGCAAATACTGAAATTGGAAGAGGGATCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR GCA 90 bp CTCTTAAAAAGGCCTGAGTTAAAAGTTCCACTCTGGGACTTGTATCAGATTACTTGCCCGAGGAGCTGCTaGAGTTGGAGGGGAGGCTTG +
Preference number: 4 (lower is better)
Translates to: LLKRPELKVPLWDLYQITCPRSC*SWRGGL
Trigger: CAAGCCTCCCCTCCAACTGCAGCAGCTCCTCGGGCA...AGTAATCTGATACAAGTCCCAGAGTGGAACTTTTAACTCAGGCCTTTTTAAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR GCA 90 bp CTCTTAAAAAGGCCTGAGTTAAAAGTTCCACTCTGGGACTTGTATCAGATTACTAGATGCCCGAGGAGCTaGTGCAGTTGGAGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: LLKRPELKVPLWDLYQITRCPRS*CSWRGG
Trigger: GCCTCCCCTCCAACTGCAGCAGCTCCTCGGGCATCT...AGTAATCTGATACAAGTCCCAGAGTGGAACTTTTAACTCAGGCCTTTTTAAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR GCA 90 bp GGGTCGACTGATAGAGGCAGTATCTGGAATGGGAAAATCGAAAATACCTGCCACGGGTCTGACGACTGGTaGGAAAGCACTCTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: GSTDRGSIWNGKIENTCHGSDDW*ESTLLF
Trigger: AAACAGAAGAGTGCTTTCGCACCAGTCGTCAGACCC...GTGGCAGGTATTTTCGATTTTCCCATTCCAGATACTGCCTCTATCAGTCGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR GCA 90 bp CTTGGGAGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCAATGGGTCTGACGACTGGTaGGAAAGCACTCTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: LGRYNFNQHPALADPSSNGSDDW*ESTLLF
Trigger: AAACAGAAGAGTGCTTTCGCACCAGTCGTCAGACCC...ATTGGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR GCA 90 bp TTAAAAAGGCCTGAGTTAAAAGTTCCACTCTGGGACTTGTATCAGATTACTCTCGGCTGTTCCCGTTGGTaGTGGTGCAGGTGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: LKRPELKVPLWDLYQITLGCSRW*WCRWEV
Trigger: CACCTCCCACCTGCACCAGCACCAACGGGAACAGCC...GAGAGTAATCTGATACAAGTCCCAGAGTGGAACTTTTAACTCAGGCCTTTTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR GCA 90 bp GTCTCAAAGGAGATTCTCACACAGTATGTGTGCCACCAAGCTCTCGAGAGGCCAGGGGGCATGCACAGTTaGAGCATTGTTGTAAATGAT +
Preference number: 4 (lower is better)
Translates to: VSKEILTQYVCHQALERPGGMHS*SIVVND
Trigger: ATCATTTACAACAATGCTGCAACTGTGCATGCCCCC...TGGCCTCTCGAGAGCTTGGTGGCACACATACTGTGTGAGAATCTCCTTTGAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR CCA 90 bp AATGTGAGGCCAGGGCAATGTTATGCAATCCAGTCATCCAGAAGCTGTATTTTTGGCTGGATGGCACTATaGCATAGGGGGAGTTGGCAG +
Preference number: 4 (lower is better)
Translates to: NVRPGQCYAIQSSRSCIFGWMAL*HRGSWQ
Trigger: CTGCCAACTCCCCCTATGCCATAGTGCCATCCAGCC...AAAAATACAGCTTCTGGATGACTGGATTGCATAACATTGCCCTGGCCTCACATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR CCA 90 bp TTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCAATTTCAGTATTTGCAAGAGGCCATGGTGGGGCTaGATGGCACTATGGCATAGG +
Preference number: 4 (lower is better)
Translates to: FNQHPALADPSSNFSICKRPWWG*MALWHR
Trigger: CCTATGCCATAGTGCCATCCAGCCCCACCATGGCCT...CTTGCAAATACTGAAATTGGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000622875.4
CDS-3UTR CCA 90 bp GCAGATCCCTCTTCCAATTTCAGTATTTGCAAGGTCGGTGATTTTGTTTGTTTATGTTCCCGTTGGTGCTaGTGCAGGTGGGAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: ADPSSNFSICKVGDFVCLCSRWC*CRWEVG
Trigger: CCCCACCTCCCACCTGCACCAGCACCAACGGGAACA...TAAACAAACAAAATCACCGACCTTGCAAATACTGAAATTGGAAGAGGGATCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR CCA 90 bp AGAATAAATATATCCCCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTGGCAGGCTGTTCCCGTTaGTGCTGGTGCAGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: RINISPKYLGGTTLTNTLAGCSR*CWCRWE
Trigger: CTCCCACCTGCACCAGCACCAACGGGAACAGCCTGC...CAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGGGGATATATTTATTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR CCA 90 bp GGTTTTGGCTTGTTAACTGGAGGGCAGAGTGTGGAATTCTGTGCCTGGACCCTGTTTTGGCTTGTTAACTaGAGGGCAGAGTGTGGAATT +
Preference number: 4 (lower is better)
Translates to: GFGLLTGGQSVEFCAWTLFWLVN*RAECGI
Trigger: AATTCCACACTCTGCCCTCCAGTTAACAAGCCAAAA...CAGGGTCCAGGCACAGAATTCCACACTCTGCCCTCCAGTTAACAAGCCAAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR TCA 90 bp GGTTTTGGCTTGTTAACTGGAGGGCAGAGTGTGGAATTCTGTGCCTGGACCCTGCCTGAATCCCAAACATaGAAACAACCTTTTCTTGTG +
Preference number: 4 (lower is better)
Translates to: GFGLLTGGQSVEFCAWTLPESQT*KQPFLV
Trigger: CACAAGAAAAGGTTGTTTTCATGTTTGGGATTCAGG...CAGGGTCCAGGCACAGAATTCCACACTCTGCCCTCCAGTTAACAAGCCAAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313708.11
CDS-3UTR TCA 90 bp ATACTTGGGAGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCTTGTCATGGAGTCAATaGGGCGCACGTAGAAATCCT +
Preference number: 4 (lower is better)
Translates to: ILGRYNFNQHPALADPSSLSWSQ*GARRNP
Trigger: AGGATTTCTACGTGCGCCTCATTGACTCCATGACAA...GGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
CDS-3UTR TCA 90 bp AGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCAATTTCAGTTGCACACGGATGGCATaGGGAGTGATCAACTCACTC +
Preference number: 4 (lower is better)
Translates to: RYNFNQHPALADPSSNFSCTRMA*GVINSL
Trigger: GAGTGAGTTGATCACTCCTCATGCCATCCGTGTGCA...ACTGAAATTGGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR TCA 90 bp ATACTTGGGAGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCGATCCGCAGCCCTTTTaGGTATTACTTCCTTTGGCA +
Preference number: 4 (lower is better)
Translates to: ILGRYNFNQHPALADPSSDPQPF*VLLPLA
Trigger: TGCCAAAGGAAGTAATACTCAAAAGGGCTGCGGATC...GGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR TCA 90 bp CCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTGATCCGCAGCCCTTTTaGGTATTACTTCCTTTGGCA +
Preference number: 4 (lower is better)
Translates to: PKYLGGTTLTNTLHLQIPDPQPF*VLLPLA
Trigger: TGCCAAAGGAAGTAATACTCAAAAGGGCTGCGGATC...AGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR TCA 90 bp TTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCAATTTCAGTATTTGCAAGCGGCCAGTTGTCCACTaGACGAATTCACGCCCATCA +
Preference number: 4 (lower is better)
Translates to: FNQHPALADPSSNFSICKRPVVH*TNSRPS
Trigger: TGATGGGCGTGAATTCGTTCAGTGGACAACTGGCCG...CTTGCAAATACTGAAATTGGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR TCA 90 bp GGTTTTGGCTTGTTAACTGGAGGGCAGAGTGTGGAATTCTGTGCCTGGACCCTGGTAGAGGGAAAAATGTaGTCACTTACATCGCGTTTT +
Preference number: 4 (lower is better)
Translates to: GFGLLTGGQSVEFCAWTLVEGKM*SLTSRF
Trigger: AAAACGCGATGTAAGTGATCACATTTTTCCCTCTAC...CAGGGTCCAGGCACAGAATTCCACACTCTGCCCTCCAGTTAACAAGCCAAAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR GCA 90 bp GGTTTTGGCTTGTTAACTGGAGGGCAGAGTGTGGAATTCTGTGCCTGGACCCTGAAAATTAGAGATGTATaGTTGGCTGTTGGGGGTTGT +
Preference number: 4 (lower is better)
Translates to: GFGLLTGGQSVEFCAWTLKIRDV*LAVGGC
Trigger: ACAACCCCCAACAGCCAAGCATACATCTCTAATTTT...CAGGGTCCAGGCACAGAATTCCACACTCTGCCCTCCAGTTAACAAGCCAAAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000313708.11
CDS-3UTR GCA 90 bp CTCTCTGTAGCAGAATCCAACCTCTTCATTAATACAATTCTTCAAGGCAATTCTGGCTGTTCCCGTTGGTaGTGGTGCAGGTGGGAGGTG +
Preference number: 4 (lower is better)
Translates to: LSVAESNLFINTILQGNSGCSRW*WCRWEV
Trigger: CACCTCCCACCTGCACCAGCACCAACGGGAACAGCC...AGAATTGCCTTGAAGAATTGTATTAATGAAGAGGTTGGATTCTGCTACAGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR GCA 90 bp GGTTTTGGCTTGTTAACTGGAGGGCAGAGTGTGGAATTCTGTGCCTGGACCCTGAACTACCATTTGATATaGTTTAAGGCGCAAAAGCCG +
Preference number: 4 (lower is better)
Translates to: GFGLLTGGQSVEFCAWTLNYHLI*FKAQKP
Trigger: CGGCTTTTGCGCCTTAAAGCATATCAAATGGTAGTT...CAGGGTCCAGGCACAGAATTCCACACTCTGCCCTCCAGTTAACAAGCCAAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR CCA 90 bp GGTTTTGGCTTGTTAACTGGAGGGCAGAGTGTGGAATTCTGTGCCTGGACCCTGAGTGAATTCCGTTATTaGTCTTTTCGCTGTTGGCTT +
Preference number: 4 (lower is better)
Translates to: GFGLLTGGQSVEFCAWTLSEFRY*SFRCWL
Trigger: AAGCCAACAGCGAAAAGACCAATAACGGAATTCACT...CAGGGTCCAGGCACAGAATTCCACACTCTGCCCTCCAGTTAACAAGCCAAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000313708.11
CDS-3UTR CCA 90 bp CCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTGAGTATTACTTCCTTTaGCAAACGCTCAGGGTCACC +
Preference number: 4 (lower is better)
Translates to: PKYLGGTTLTNTLHLQIPEYYFL*QTLRVT
Trigger: GGTGACCCTGAGCGTTTGCCAAAGGAAGTAATACTC...AGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR CCA 90 bp ATACTTGGGAGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCGAGTATTACTTCCTTTaGCAAACGCTCAGGGTCACC +
Preference number: 4 (lower is better)
Translates to: ILGRYNFNQHPALADPSSEYYFL*QTLRVT
Trigger: GGTGACCCTGAGCGTTTGCCAAAGGAAGTAATACTC...GGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR CCA 90 bp ATACTTGGGAGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCTTCCTGGTTGTTGTGTaGCATCCCATACAGTGCTTC +
Preference number: 4 (lower is better)
Translates to: ILGRYNFNQHPALADPSSFLVVV*HPIQCF
Trigger: GAAGCACTGTATGGGATGCCACACAACAACCAGGAA...GGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR CCA 90 bp TTAAAAAGGCCTGAGTTAAAAGTTCCACTCTGGGACTTGTATCAGATTACTCTCGCAAGGGCCGGGAGTTaGTTGTGGTTGCGGGGAACA +
Preference number: 4 (lower is better)
Translates to: LKRPELKVPLWDLYQITLARAGS*LWLRGT
Trigger: TGTTCCCCGCAACCACAACCAACTCCCGGCCCTTGC...GAGAGTAATCTGATACAAGTCCCAGAGTGGAACTTTTAACTCAGGCCTTTTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR CCA 90 bp TTAAAAAGGCCTGAGTTAAAAGTTCCACTCTGGGACTTGTATCAGATTACTCTCGGGAGCCGCCCAAATTaGACATTGCGGCAGAGCCGT +
Preference number: 4 (lower is better)
Translates to: LKRPELKVPLWDLYQITLGSRPN*TLRQSR
Trigger: ACGGCTCTGCCGCAATGTCCAATTTGGGCGGCTCCC...GAGAGTAATCTGATACAAGTCCCAGAGTGGAACTTTTAACTCAGGCCTTTTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000622875.4
CDS-3UTR CCA 90 bp AATAAATATATCCCCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTGCAGGGAGCCGCCCAAATTaGACATTGCGGCAGAGCCGT +
Preference number: 4 (lower is better)
Translates to: NKYIPQILGRYNFNQHPAGSRPN*TLRQSR
Trigger: ACGGCTCTGCCGCAATGTCCAATTTGGGCGGCTCCC...TGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGGGGATATATTTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000622875.4
CDS-3UTR CCA 90 bp TTAAAAAGGCCTGAGTTAAAAGTTCCACTCTGGGACTTGTATCAGATTACTCTCAGGAGCTGCTGCAGTTaGAGGGGAGGCTTGTGGAGG +
Preference number: 4 (lower is better)
Translates to: LKRPELKVPLWDLYQITLRSCCS*RGGLWR
Trigger: CCTCCACAAGCCTCCCCTCCAACTGCAGCAGCTCCT...GAGAGTAATCTGATACAAGTCCCAGAGTGGAACTTTTAACTCAGGCCTTTTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR CCA 90 bp CTCTCTGTAGCAGAATCCAACCTCTTCATTAATACAATTCTTCAAGGCAATTCTTGTTCCCGTTGGTGCTaGTGCAGGTGGGAGGTGGGG +
Preference number: 4 (lower is better)
Translates to: LSVAESNLFINTILQGNSCSRWC*CRWEVG
Trigger: CCCCACCTCCCACCTGCACCAGCACCAACGGGAACA...AGAATTGCCTTGAAGAATTGTATTAATGAAGAGGTTGGATTCTGCTACAGAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR CCA 90 bp CTTGGGAGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCAATCACATGGCTGACAGATaGGTAGTGTCTGTTGTCAAG +
Preference number: 4 (lower is better)
Translates to: LGRYNFNQHPALADPSSNHMADR*VVSVVK
Trigger: CTTGACAACAGACACTACCCATCTGTCAGCCATGTG...ATTGGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR CCA 90 bp CCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTCACATGGCTGACAGATaGGTAGTGTCTGTTGTCAAG +
Preference number: 4 (lower is better)
Translates to: PKYLGGTTLTNTLHLQIPHMADR*VVSVVK
Trigger: CTTGACAACAGACACTACCCATCTGTCAGCCATGTG...AGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR CCA 90 bp AGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCAATTTCAGTGCACTACCTGATTGGTaGCTTGTGATGCCTCGGAGA +
Preference number: 4 (lower is better)
Translates to: RYNFNQHPALADPSSNFSALPDW*LVMPRR
Trigger: TCTCCGAGGCATCACAAGCCACCAATCAGGTAGTGC...ACTGAAATTGGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000517373.1
CDS-3UTR TCA 90 bp CCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTGCATGGTACCGAATATaGCCTGTAACCCATCAAAGA +
Preference number: 4 (lower is better)
Translates to: PKYLGGTTLTNTLHLQIPAWYRI*PVTHQR
Trigger: TCTTTGATGGGTTACAGGTCATATTCGGTACCATGC...AGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR TCA 90 bp TTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCAATTTCAGTATTTGCAAGGGATGGCATGAGGAGTaGTCAACTCACTCCAGACCA +
Preference number: 4 (lower is better)
Translates to: FNQHPALADPSSNFSICKGWHEE*STHSRP
Trigger: TGGTCTGGAGTGAGTTGATCACTCCTCATGCCATCC...CTTGCAAATACTGAAATTGGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR TCA 90 bp TTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCAATTTCAGTATTTGCAAGTGCACACGGATGGCATaGGGAGTGATCAACTCACTC +
Preference number: 4 (lower is better)
Translates to: FNQHPALADPSSNFSICKCTRMA*GVINSL
Trigger: GAGTGAGTTGATCACTCCTCATGCCATCCGTGTGCA...CTTGCAAATACTGAAATTGGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR TCA 90 bp TGTTGTCAAGGTCTAAGCCGGACACCTTCCCGGCTGACCGTTCATTCCTTCAGAAATCTGCAGTTATTGTaGTTCCTCTTAAAAAGGCCT +
Preference number: 4 (lower is better)
Translates to: CCQGLSRTPSRLTVHSFRNLQLL*FLLKRP
Trigger: AGGCCTTTTTAAGAGGAATCACAATAACTGCAGATT...TCTGAAGGAATGAACGGTCAGCCGGGAAGGTGTCCGGCTTAGACCTTGACAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR GCA 90 bp ATACTTGGGAGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCTTCCACTCCGTTGGATaGTTTCCTGAATCCCAAACA +
Preference number: 4 (lower is better)
Translates to: ILGRYNFNQHPALADPSSFHSVG*FPESQT
Trigger: TGTTTGGGATTCAGGAAAGCATCCAACGGAGTGGAA...GGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
CDS-3UTR GCA 90 bp AGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCAATTTCAGTCATGTTATCAGAGACTaGCAGGACATGGCCATCCAC +
Preference number: 4 (lower is better)
Translates to: RYNFNQHPALADPSSNFSHVIRD*QDMAIH
Trigger: GTGGATGGCCATGTCCTGGCAGTCTCTGATAACATG...ACTGAAATTGGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR GCA 90 bp AGAATAAATATATCCCCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTGACAACACCAGGGATGTaGCGAGGAGGGGTCTGCACA +
Preference number: 4 (lower is better)
Translates to: RINISPKYLGGTTLTNTLTTPGM*RGGVCT
Trigger: TGTGCAGACCCCTCCTCGGCACATCCCTGGTGTTGT...CAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGGGGATATATTTATTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR GCA 90 bp CAGGCAAATGCATCCTCAGAGCTTTGCTGCATCTTTGCTATTAATTCTTATTTTCACGCCCATCATCCCTaGGTGGACCGAGGTGTTAGC +
Preference number: 4 (lower is better)
Translates to: QANASSELCCIFAINSYFHAHHP*VDRGVS
Trigger: GCTAACACCTCGGTCCACGCAGGGATGATGGGCGTG...AAAATAAGAATTAATAGCAAAGATGCAGCAAAGCTCTGAGGATGCATTTGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR GCA 90 bp CTCTCTGTAGCAGAATCCAACCTCTTCATTAATACAATTCTTCAAGGCAATTCTCACGCCCATCATCCCTaGGTGGACCGAGGTGTTAGC +
Preference number: 4 (lower is better)
Translates to: LSVAESNLFINTILQGNSHAHHP*VDRGVS
Trigger: GCTAACACCTCGGTCCACGCAGGGATGATGGGCGTG...AGAATTGCCTTGAAGAATTGTATTAATGAAGAGGTTGGATTCTGCTACAGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR GCA 90 bp TTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCAATTTCAGTATTTGCAAGGCCCAAATTGGACATTaGGGCAGAGCCGTATCCGTT +
Preference number: 4 (lower is better)
Translates to: FNQHPALADPSSNFSICKAQIGH*GRAVSV
Trigger: AACGGATACGGCTCTGCCGCAATGTCCAATTTGGGC...CTTGCAAATACTGAAATTGGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000622875.4
CDS-3UTR GCA 90 bp ATACTTGGGAGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCGGGGGCATGCACAGTTaGAGCATTGTTGTAAATGAT +
Preference number: 4 (lower is better)
Translates to: ILGRYNFNQHPALADPSSGGMHS*SIVVND
Trigger: ATCATTTACAACAATGCTGCAACTGTGCATGCCCCC...GGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR CCA 90 bp CCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTTCTGGGTTCTTGTCTTaGCCTTCATACACTATGGCT +
Preference number: 4 (lower is better)
Translates to: PKYLGGTTLTNTLHLQIPSGFLS*PSYTMA
Trigger: AGCCATAGTGTATGAAGGCCAAGACAAGAACCCAGA...AGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
CDS-3UTR CCA 90 bp AATGTGAGGCCAGGGCAATGTTATGCAATCCAGTCATCCAGAAGCTGTATTTTTGTAGACACCACGACCTaGAATCTCCGCATGTCACGT +
Preference number: 4 (lower is better)
Translates to: NVRPGQCYAIQSSRSCIFVDTTT*NLRMSR
Trigger: ACGTGACATGCGGAGATTCCAGGTCGTGGTGTCTAC...AAAAATACAGCTTCTGGATGACTGGATTGCATAACATTGCCCTGGCCTCACATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR CCA 90 bp ATACTTGGGAGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCCCCTCCGCCCATGCTTaGAATTATTATGGACAAACA +
Preference number: 4 (lower is better)
Translates to: ILGRYNFNQHPALADPSSPSAHA*NYYGQT
Trigger: TGTTTGTCCATAATAATTCCAAGCATGGGCGGAGGG...GGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR CCA 90 bp GCAGATCCCTCTTCCAATTTCAGTATTTGCAAGGTCGGTGATTTTGTTTGTTTACCCATCATCCCTGCGTaGACCGAGGTGTTAGCAAGG +
Preference number: 4 (lower is better)
Translates to: ADPSSNFSICKVGDFVCLPIIPA*TEVLAR
Trigger: CCTTGCTAACACCTCGGTCCACGCAGGGATGATGGG...TAAACAAACAAAATCACCGACCTTGCAAATACTGAAATTGGAAGAGGGATCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR CCA 90 bp AATAAATATATCCCCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTGCACCCATCATCCCTGCGTaGACCGAGGTGTTAGCAAGG +
Preference number: 4 (lower is better)
Translates to: NKYIPQILGRYNFNQHPAPIIPA*TEVLAR
Trigger: CCTTGCTAACACCTCGGTCCACGCAGGGATGATGGG...TGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGGGGATATATTTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR CCA 90 bp AATAAATATATCCCCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTGCAGGCTGGATGGCACTATaGCATAGGGGGAGTTGGCAG +
Preference number: 4 (lower is better)
Translates to: NKYIPQILGRYNFNQHPAGWMAL*HRGSWQ
Trigger: CTGCCAACTCCCCCTATGCCATAGTGCCATCCAGCC...TGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGGGGATATATTTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000622875.4
CDS-3UTR CCA 90 bp GCAGATCCCTCTTCCAATTTCAGTATTTGCAAGGTCGGTGATTTTGTTTGTTTACATGGTGGGGCTGGATaGCACTATGGCATAGGGGGA +
Preference number: 4 (lower is better)
Translates to: ADPSSNFSICKVGDFVCLHGGAG*HYGIGG
Trigger: TCCCCCTATGCCATAGTGCCATCCAGCCCCACCATG...TAAACAAACAAAATCACCGACCTTGCAAATACTGAAATTGGAAGAGGGATCTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000622875.4
CDS-3UTR CCA 90 bp AGAATAAATATATCCCCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTGCATGGTGGGGCTGGATaGCACTATGGCATAGGGGGA +
Preference number: 4 (lower is better)
Translates to: RINISPKYLGGTTLTNTLHGGAG*HYGIGG
Trigger: TCCCCCTATGCCATAGTGCCATCCAGCCCCACCATG...CAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGGGGATATATTTATTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000622875.4
CDS-3UTR CCA 90 bp GCAGATCCCTCTTCCAATTTCAGTATTTGCAAGGTCGGTGATTTTGTTTGTTTAAGGCCATGGTGGGGCTaGATGGCACTATGGCATAGG +
Preference number: 4 (lower is better)
Translates to: ADPSSNFSICKVGDFVCLRPWWG*MALWHR
Trigger: CCTATGCCATAGTGCCATCCAGCCCCACCATGGCCT...TAAACAAACAAAATCACCGACCTTGCAAATACTGAAATTGGAAGAGGGATCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000622875.4
CDS-3UTR CCA 90 bp CTCTCTGTAGCAGAATCCAACCTCTTCATTAATACAATTCTTCAAGGCAATTCTAGGAGCTGCTGCAGTTaGAGGGGAGGCTTGTGGAGG +
Preference number: 4 (lower is better)
Translates to: LSVAESNLFINTILQGNSRSCCS*RGGLWR
Trigger: CCTCCACAAGCCTCCCCTCCAACTGCAGCAGCTCCT...AGAATTGCCTTGAAGAATTGTATTAATGAAGAGGTTGGATTCTGCTACAGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR CCA 90 bp CTCTTAAAAAGGCCTGAGTTAAAAGTTCCACTCTGGGACTTGTATCAGATTACTCTGGAGGGCAGAGTGTaGAATTCTGTGCCTGGACCC +
Preference number: 4 (lower is better)
Translates to: LLKRPELKVPLWDLYQITLEGRV*NSVPGP
Trigger: GGGTCCAGGCACAGAATTCCACACTCTGCCCTCCAG...AGTAATCTGATACAAGTCCCAGAGTGGAACTTTTAACTCAGGCCTTTTTAAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR CCA 90 bp AGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCAATTTCAGTGCGTACGTGAGGTTTTaGCTTGTTAACTGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: RYNFNQHPALADPSSNFSAYVRF*LVNWRA
Trigger: TGCCCTCCAGTTAACAAGCCAAAACCTCACGTACGC...ACTGAAATTGGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR CCA 90 bp CAGAATAAATATATCCCCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTCATGGTGGGGCTGGATaGCACTACCTGATTGGTGGC +
Preference number: 4 (lower is better)
Translates to: QNKYIPQILGRYNFNQHPHGGAG*HYLIGG
Trigger: GCCACCAATCAGGTAGTGCCATCCAGCCCCACCATG...AGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGGGGATATATTTATTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517373.1
CDS-3UTR CCA 90 bp AATAAATATATCCCCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTGCAAGGCCATGGTGGGGCTaGATGGCACTACCTGATTGG +
Preference number: 4 (lower is better)
Translates to: NKYIPQILGRYNFNQHPARPWWG*MALPDW
Trigger: CCAATCAGGTAGTGCCATCCAGCCCCACCATGGCCT...TGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGGGGATATATTTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517373.1
CDS-3UTR TCA 90 bp AGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCAATTTCAGTATTTGTAGGACAGTGTaGCTTCCACAACACCAGGGA +
Preference number: 4 (lower is better)
Translates to: RYNFNQHPALADPSSNFSICRTV*LPQHQG
Trigger: TCCCTGGTGTTGTGGAAGTCACACTGTCCTACAAAT...ACTGAAATTGGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR TCA 90 bp CTCTTAAAAAGGCCTGAGTTAAAAGTTCCACTCTGGGACTTGTATCAGATTACTCAGGGTGCCGAGGAATaGCCTTCTGTAACCTCTGGA +
Preference number: 4 (lower is better)
Translates to: LLKRPELKVPLWDLYQITQGAEE*PSVTSG
Trigger: TCCAGAGGTTACAGAAGGTCATTCCTCGGCACCCTG...AGTAATCTGATACAAGTCCCAGAGTGGAACTTTTAACTCAGGCCTTTTTAAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR TCA 90 bp TTAAAAAGGCCTGAGTTAAAAGTTCCACTCTGGGACTTGTATCAGATTACTCTCCAGGGTGCCGAGGAATaGCCTTCTGTAACCTCTGGA +
Preference number: 4 (lower is better)
Translates to: LKRPELKVPLWDLYQITLQGAEE*PSVTSG
Trigger: TCCAGAGGTTACAGAAGGTCATTCCTCGGCACCCTG...GAGAGTAATCTGATACAAGTCCCAGAGTGGAACTTTTAACTCAGGCCTTTTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR TCA 90 bp GCAGATCCCTCTTCCAATTTCAGTATTTGCAAGGTCGGTGATTTTGTTTGTTTACAGGGTGCCGAGGAATaGCCTTCTGTAACCTCTGGA +
Preference number: 4 (lower is better)
Translates to: ADPSSNFSICKVGDFVCLQGAEE*PSVTSG
Trigger: TCCAGAGGTTACAGAAGGTCATTCCTCGGCACCCTG...TAAACAAACAAAATCACCGACCTTGCAAATACTGAAATTGGAAGAGGGATCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR TCA 90 bp GCAGATCCCTCTTCCAATTTCAGTATTTGCAAGGTCGGTGATTTTGTTTGTTTATTGCGGGTGAAACCCTaGTTGGTGGCTTGTGATGCC +
Preference number: 4 (lower is better)
Translates to: ADPSSNFSICKVGDFVCLLRVKP*LVACDA
Trigger: GGCATCACAAGCCACCAATCAGGGTTTCACCCGCAA...TAAACAAACAAAATCACCGACCTTGCAAATACTGAAATTGGAAGAGGGATCTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000622875.4
CDS-3UTR TCA 90 bp ATACTTGGGAGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCCCTCTTAAAAAGGCCTaGGTTAAAAGTTCCACTCTG +
Preference number: 4 (lower is better)
Translates to: ILGRYNFNQHPALADPSSPLKKA*VKSSTL
Trigger: CAGAGTGGAACTTTTAACTCAGGCCTTTTTAAGAGG...GGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR TCA 90 bp TATGTGTGCCACCAAGCTCTCGAGAGGCCATCGGCTTCAGAAGAAACTGACTTAGAGCTAACTACCATTTaGTATGCTTTAAGGCGCAAA +
Preference number: 4 (lower is better)
Translates to: YVCHQALERPSASEETDLELTTI*YALRRK
Trigger: TTTGCGCCTTAAAGCATATCAAATGGTAGTTAGCTC...TAAGTCAGTTTCTTCTGAAGCCGATGGCCTCTCGAGAGCTTGGTGGCACACATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR TCA 90 bp TTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCAATTTCAGTATTTGCAAGATGGGGGAGCGTACGTaGGGTTTTGGCTTGTTAACT +
Preference number: 4 (lower is better)
Translates to: FNQHPALADPSSNFSICKMGERT*GFGLLT
Trigger: AGTTAACAAGCCAAAACCTCACGTACGCTCCCCCAT...CTTGCAAATACTGAAATTGGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR GCA 90 bp CTCTTAAAAAGGCCTGAGTTAAAAGTTCCACTCTGGGACTTGTATCAGATTACTGCGGCTCTTCCTTCATaGTGCTTCCACTCCGTTGGA +
Preference number: 4 (lower is better)
Translates to: LLKRPELKVPLWDLYQITAALPS*CFHSVG
Trigger: TCCAACGGAGTGGAAGCAGCATGAAGGAAGAGCCGC...AGTAATCTGATACAAGTCCCAGAGTGGAACTTTTAACTCAGGCCTTTTTAAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
CDS-3UTR GCA 90 bp TTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCAATTTCAGTATTTGCAAGCCGTCCTTATCCCATTaGTGTAGAGAAGCTGAAGCC +
Preference number: 4 (lower is better)
Translates to: FNQHPALADPSSNFSICKPSLSH*CREAEA
Trigger: GGCTTCAGCTTCTCTACAGCAATGGGATAAGGACGG...CTTGCAAATACTGAAATTGGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
CDS-3UTR GCA 90 bp AATGTGAGGCCAGGGCAATGTTATGCAATCCAGTCATCCAGAAGCTGTATTTTTCGAGCCCTCCGCCCATaGTTGGAATTATTATGGACA +
Preference number: 4 (lower is better)
Translates to: NVRPGQCYAIQSSRSCIFRALRP*LELLWT
Trigger: TGTCCATAATAATTCCAAGCATGGGCGGAGGGCTCG...AAAAATACAGCTTCTGGATGACTGGATTGCATAACATTGCCCTGGCCTCACATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR GCA 90 bp AGAATAAATATATCCCCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTGTCAGGGTCACCAGGGTaGCGAGGAATGACCTTCTGT +
Preference number: 4 (lower is better)
Translates to: RINISPKYLGGTTLTNTLSGSPG*RGMTFC
Trigger: ACAGAAGGTCATTCCTCGGCACCCTGGTGACCCTGA...CAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGGGGATATATTTATTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR GCA 90 bp AGAATAAATATATCCCCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTGGGAGTTGGTTGTGGTTaGGGGGAACACTGTACAGGG +
Preference number: 4 (lower is better)
Translates to: RINISPKYLGGTTLTNTLGVGCG*GEHCTG
Trigger: CCCTGTACAGTGTTCCCCGCAACCACAACCAACTCC...CAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGGGGATATATTTATTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR GCA 90 bp CTCTTAAAAAGGCCTGAGTTAAAAGTTCCACTCTGGGACTTGTATCAGATTACTGGAGTTGGTTGTGGTTaGGGGGAACACTGTACAGGG +
Preference number: 4 (lower is better)
Translates to: LLKRPELKVPLWDLYQITGVGCG*GEHCTG
Trigger: CCCTGTACAGTGTTCCCCGCAACCACAACCAACTCC...AGTAATCTGATACAAGTCCCAGAGTGGAACTTTTAACTCAGGCCTTTTTAAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR GCA 90 bp TTAAAAAGGCCTGAGTTAAAAGTTCCACTCTGGGACTTGTATCAGATTACTCTCGGAGTTGGTTGTGGTTaGGGGGAACACTGTACAGGG +
Preference number: 4 (lower is better)
Translates to: LKRPELKVPLWDLYQITLGVGCG*GEHCTG
Trigger: CCCTGTACAGTGTTCCCCGCAACCACAACCAACTCC...GAGAGTAATCTGATACAAGTCCCAGAGTGGAACTTTTAACTCAGGCCTTTTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR GCA 90 bp AATAAATATATCCCCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTGCAGTGAGAAGGAGAAGATaGCCGAGGAGCTGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: NKYIPQILGRYNFNQHPAVRRRR*PRSCCS
Trigger: ACTGCAGCAGCTCCTCGGGCATCTTCTCCTTCTCAC...TGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGGGGATATATTTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR GCA 90 bp AGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCAATTTCAGTGCCAGGGCAATGTTATaGAATCCAGTCATCCAGAAG +
Preference number: 4 (lower is better)
Translates to: RYNFNQHPALADPSSNFSARAML*NPVIQK
Trigger: CTTCTGGATGACTGGATTGCATAACATTGCCCTGGC...ACTGAAATTGGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR CCA 90 bp ATACTTGGGAGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCTGGTCTTTTCGCTGTTaGCTTCTTTTTCCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: ILGRYNFNQHPALADPSSWSFRC*LLFPSP
Trigger: TGGAGAAGGAAAAAGAAGCCAACAGCGAAAAGACCA...GGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
CDS-3UTR CCA 90 bp ATACTTGGGAGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCGGCCTTCATACACTATaGCTTGTTTTGTCATGGAGT +
Preference number: 4 (lower is better)
Translates to: ILGRYNFNQHPALADPSSGLHTL*LVLSWS
Trigger: ACTCCATGACAAAACAAGCCATAGTGTATGAAGGCC...GGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
CDS-3UTR CCA 90 bp CCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTTTCAGAATGATTTCCTaGTTGTTGTGTGGCATCCCA +
Preference number: 4 (lower is better)
Translates to: PKYLGGTTLTNTLHLQIPFRMIS*LLCGIP
Trigger: TGGGATGCCACACAACAACCAGGAAATCATTCTGAA...AGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR CCA 90 bp CTCTCTGTAGCAGAATCCAACCTCTTCATTAATACAATTCTTCAAGGCAATTCTCCCATCATCCCTGCGTaGACCGAGGTGTTAGCAAGG +
Preference number: 4 (lower is better)
Translates to: LSVAESNLFINTILQGNSPIIPA*TEVLAR
Trigger: CCTTGCTAACACCTCGGTCCACGCAGGGATGATGGG...AGAATTGCCTTGAAGAATTGTATTAATGAAGAGGTTGGATTCTGCTACAGAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR CCA 90 bp TCACTTACATCGCGTTTTAACTTTCCAGGCTGCATTTATTTACACAGTTGCTTAAGGCCATGGTGGGGCTaGATGGCACTATGGCATAGG +
Preference number: 4 (lower is better)
Translates to: SLTSRFNFPGCIYLHSCLRPWWG*MALWHR
Trigger: CCTATGCCATAGTGCCATCCAGCCCCACCATGGCCT...TAAGCAACTGTGTAAATAAATGCAGCCTGGAAAGTTAAAACGCGATGTAAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR CCA 90 bp TTAAAAAGGCCTGAGTTAAAAGTTCCACTCTGGGACTTGTATCAGATTACTCTCCTGGGGTCTGACGACTaGTGCGAAAGCACTCTTCTG +
Preference number: 4 (lower is better)
Translates to: LKRPELKVPLWDLYQITLLGSDD*CESTLL
Trigger: CAGAAGAGTGCTTTCGCACCAGTCGTCAGACCCCAG...GAGAGTAATCTGATACAAGTCCCAGAGTGGAACTTTTAACTCAGGCCTTTTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR CCA 90 bp TCACTTACATCGCGTTTTAACTTTCCAGGCTGCATTTATTTACACAGTTGCTTACTGGAGGGCAGAGTGTaGAATTCTGTGCCTGGACCC +
Preference number: 4 (lower is better)
Translates to: SLTSRFNFPGCIYLHSCLLEGRV*NSVPGP
Trigger: GGGTCCAGGCACAGAATTCCACACTCTGCCCTCCAG...TAAGCAACTGTGTAAATAAATGCAGCCTGGAAAGTTAAAACGCGATGTAAGTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR TCA 90 bp CTTGGGAGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCAATCCTGAATCCCAAACATaGAAACAACCTTTTCTTGTG +
Preference number: 4 (lower is better)
Translates to: LGRYNFNQHPALADPSSNPESQT*KQPFLV
Trigger: CACAAGAAAAGGTTGTTTTCATGTTTGGGATTCAGG...ATTGGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
CDS-3UTR TCA 90 bp AGAATAAATATATCCCCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTGGGATGGCATGAGGAGTaGTCAACTCACTCCAGACCA +
Preference number: 4 (lower is better)
Translates to: RINISPKYLGGTTLTNTLGWHEE*STHSRP
Trigger: TGGTCTGGAGTGAGTTGATCACTCCTCATGCCATCC...CAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGGGGATATATTTATTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR TCA 90 bp GCAGATCCCTCTTCCAATTTCAGTATTTGCAAGGTCGGTGATTTTGTTTGTTTATGCACACGGATGGCATaGGGAGTGATCAACTCACTC +
Preference number: 4 (lower is better)
Translates to: ADPSSNFSICKVGDFVCLCTRMA*GVINSL
Trigger: GAGTGAGTTGATCACTCCTCATGCCATCCGTGTGCA...TAAACAAACAAAATCACCGACCTTGCAAATACTGAAATTGGAAGAGGGATCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR TCA 90 bp AATAAATATATCCCCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTGCATGCACACGGATGGCATaGGGAGTGATCAACTCACTC +
Preference number: 4 (lower is better)
Translates to: NKYIPQILGRYNFNQHPACTRMA*GVINSL
Trigger: GAGTGAGTTGATCACTCCTCATGCCATCCGTGTGCA...TGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGGGGATATATTTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR TCA 90 bp TTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCAATTTCAGTATTTGCAAGCCGCTCTCTTCAGAATaGTTTCCTGGTTGTTGTGTG +
Preference number: 4 (lower is better)
Translates to: FNQHPALADPSSNFSICKPLSSE*FPGCCV
Trigger: CACACAACAACCAGGAAATCATTCTGAAGAGAGCGG...CTTGCAAATACTGAAATTGGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR TCA 90 bp CTCTTAAAAAGGCCTGAGTTAAAAGTTCCACTCTGGGACTTGTATCAGATTACTCTGATTGGTGGCTTGTaGTGCCTCGGAGACATTCAC +
Preference number: 4 (lower is better)
Translates to: LLKRPELKVPLWDLYQITLIGGL*CLGDIH
Trigger: GTGAATGTCTCCGAGGCATCACAAGCCACCAATCAG...AGTAATCTGATACAAGTCCCAGAGTGGAACTTTTAACTCAGGCCTTTTTAAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR TCA 90 bp CTCTCTGTAGCAGAATCCAACCTCTTCATTAATACAATTCTTCAAGGCAATTCTTTGCGGGTGAAACCCTaGTTGGTGGCTTGTGATGCC +
Preference number: 4 (lower is better)
Translates to: LSVAESNLFINTILQGNSLRVKP*LVACDA
Trigger: GGCATCACAAGCCACCAATCAGGGTTTCACCCGCAA...AGAATTGCCTTGAAGAATTGTATTAATGAAGAGGTTGGATTCTGCTACAGAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000622875.4
CDS-3UTR TCA 90 bp CTCTCTGTAGCAGAATCCAACCTCTTCATTAATACAATTCTTCAAGGCAATTCTGGACACCTTCCCGGCTaGCCGTTCATTCCTTCAGAA +
Preference number: 4 (lower is better)
Translates to: LSVAESNLFINTILQGNSGHLPG*PFIPSE
Trigger: TTCTGAAGGAATGAACGGTCAGCCGGGAAGGTGTCC...AGAATTGCCTTGAAGAATTGTATTAATGAAGAGGTTGGATTCTGCTACAGAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR TCA 90 bp GCAGATCCCTCTTCCAATTTCAGTATTTGCAAGGTCGGTGATTTTGTTTGTTTAACCACTGCACATGGCTaGCAGATGGGTAGTGTCTGT +
Preference number: 4 (lower is better)
Translates to: ADPSSNFSICKVGDFVCLTTAHG*QMGSVC
Trigger: ACAGACACTACCCATCTGTCAGCCATGTGCAGTGGT...TAAACAAACAAAATCACCGACCTTGCAAATACTGAAATTGGAAGAGGGATCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR GCA 90 bp CAGAATAAATATATCCCCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTGCTCTTCCTTCATGCTaGTTCCACTCCGTTGGATGC +
Preference number: 4 (lower is better)
Translates to: QNKYIPQILGRYNFNQHPALPSC*FHSVGC
Trigger: GCATCCAACGGAGTGGAAGCAGCATGAAGGAAGAGC...AGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGGGGATATATTTATTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
CDS-3UTR GCA 90 bp CTCTCTGTAGCAGAATCCAACCTCTTCATTAATACAATTCTTCAAGGCAATTCTGCGGCTCTTCCTTCATaGTGCTTCCACTCCGTTGGA +
Preference number: 4 (lower is better)
Translates to: LSVAESNLFINTILQGNSAALPS*CFHSVG
Trigger: TCCAACGGAGTGGAAGCAGCATGAAGGAAGAGCCGC...AGAATTGCCTTGAAGAATTGTATTAATGAAGAGGTTGGATTCTGCTACAGAGAG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
CDS-3UTR GCA 90 bp CAGGCAAATGCATCCTCAGAGCTTTGCTGCATCTTTGCTATTAATTCTTATTTTTCAGGGTCACCAGGGTaGCGAGGAATGACCTTCTGT +
Preference number: 4 (lower is better)
Translates to: QANASSELCCIFAINSYFSGSPG*RGMTFC
Trigger: ACAGAAGGTCATTCCTCGGCACCCTGGTGACCCTGA...AAAATAAGAATTAATAGCAAAGATGCAGCAAAGCTCTGAGGATGCATTTGCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR GCA 90 bp CTCTTAAAAAGGCCTGAGTTAAAAGTTCCACTCTGGGACTTGTATCAGATTACTTGGCATCCCATACAGTaGTTCTACCAGATCCGCAGC +
Preference number: 4 (lower is better)
Translates to: LLKRPELKVPLWDLYQITWHPIQ*FYQIRS
Trigger: GCTGCGGATCTGGTAGAAGCACTGTATGGGATGCCA...AGTAATCTGATACAAGTCCCAGAGTGGAACTTTTAACTCAGGCCTTTTTAAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR GCA 90 bp AGAATAAATATATCCCCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTGTGGCATCCCATACAGTaGTTCTACCAGATCCGCAGC +
Preference number: 4 (lower is better)
Translates to: RINISPKYLGGTTLTNTLWHPIQ*FYQIRS
Trigger: GCTGCGGATCTGGTAGAAGCACTGTATGGGATGCCA...CAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGGGGATATATTTATTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR GCA 90 bp AATAAATATATCCCCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTGCAGCCCAAATTGGACATTaGGGCAGAGCCGTATCCGTT +
Preference number: 4 (lower is better)
Translates to: NKYIPQILGRYNFNQHPAAQIGH*GRAVSV
Trigger: AACGGATACGGCTCTGCCGCAATGTCCAATTTGGGC...TGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGGGGATATATTTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000622875.4
CDS-3UTR GCA 90 bp GCAGATCCCTCTTCCAATTTCAGTATTTGCAAGGTCGGTGATTTTGTTTGTTTAGCCCAAATTGGACATTaGGGCAGAGCCGTATCCGTT +
Preference number: 4 (lower is better)
Translates to: ADPSSNFSICKVGDFVCLAQIGH*GRAVSV
Trigger: AACGGATACGGCTCTGCCGCAATGTCCAATTTGGGC...TAAACAAACAAAATCACCGACCTTGCAAATACTGAAATTGGAAGAGGGATCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000622875.4
CDS-3UTR GCA 90 bp CTCTCTGTAGCAGAATCCAACCTCTTCATTAATACAATTCTTCAAGGCAATTCTGTGAGAAGGAGAAGATaGCCGAGGAGCTGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: LSVAESNLFINTILQGNSVRRRR*PRSCCS
Trigger: ACTGCAGCAGCTCCTCGGGCATCTTCTCCTTCTCAC...AGAATTGCCTTGAAGAATTGTATTAATGAAGAGGTTGGATTCTGCTACAGAGAG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR GCA 90 bp AATAAATATATCCCCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTGCACTCACACAGTATGTGTaGCACCAAGCTCTCGAGAGG +
Preference number: 4 (lower is better)
Translates to: NKYIPQILGRYNFNQHPALTQYV*HQALER
Trigger: CCTCTCGAGAGCTTGGTGGCACACATACTGTGTGAG...TGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGGGGATATATTTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR GCA 90 bp AGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCAATTTCAGTAGTACCGAGAAGCAATaGGTCCACCTTGCTTACATT +
Preference number: 4 (lower is better)
Translates to: RYNFNQHPALADPSSNFSSTEKQ*VHLAYI
Trigger: AATGTAAGCAAGGTGGACGCATTGCTTCTCGGTACT...ACTGAAATTGGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR CCA 90 bp TTAAAAAGGCCTGAGTTAAAAGTTCCACTCTGGGACTTGTATCAGATTACTCTCGTAGACACCACGACCTaGAATCTCCGCATGTCACGT +
Preference number: 4 (lower is better)
Translates to: LKRPELKVPLWDLYQITLVDTTT*NLRMSR
Trigger: ACGTGACATGCGGAGATTCCAGGTCGTGGTGTCTAC...GAGAGTAATCTGATACAAGTCCCAGAGTGGAACTTTTAACTCAGGCCTTTTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR CCA 90 bp TTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCAATTTCAGTATTTGCAAGTTCCTGGTTGTTGTGTaGCATCCCATACAGTGCTTC +
Preference number: 4 (lower is better)
Translates to: FNQHPALADPSSNFSICKFLVVV*HPIQCF
Trigger: GAAGCACTGTATGGGATGCCACACAACAACCAGGAA...CTTGCAAATACTGAAATTGGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR CCA 90 bp CTCTCTGTAGCAGAATCCAACCTCTTCATTAATACAATTCTTCAAGGCAATTCTCTGGGGTCTGACGACTaGTGCGAAAGCACTCTTCTG +
Preference number: 4 (lower is better)
Translates to: LSVAESNLFINTILQGNSLGSDD*CESTLL
Trigger: CAGAAGAGTGCTTTCGCACCAGTCGTCAGACCCCAG...AGAATTGCCTTGAAGAATTGTATTAATGAAGAGGTTGGATTCTGCTACAGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR CCA 90 bp TATGTGTGCCACCAAGCTCTCGAGAGGCCATCGGCTTCAGAAGAAACTGACTTAGATAGAGGCAGTATCTaGAATGGGAAAATCGAAAAT +
Preference number: 4 (lower is better)
Translates to: YVCHQALERPSASEETDLDRGSI*NGKIEN
Trigger: ATTTTCGATTTTCCCATTCCAGATACTGCCTCTATC...TAAGTCAGTTTCTTCTGAAGCCGATGGCCTCTCGAGAGCTTGGTGGCACACATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR CCA 90 bp AGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCAATTTCAGTATTGCAAAATCCATATaGGGGCATGCACAGTTGCAG +
Preference number: 4 (lower is better)
Translates to: RYNFNQHPALADPSSNFSIAKSI*GHAQLQ
Trigger: CTGCAACTGTGCATGCCCCCATATGGATTTTGCAAT...ACTGAAATTGGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR CCA 90 bp TTAAAAAGGCCTGAGTTAAAAGTTCCACTCTGGGACTTGTATCAGATTACTCTCATGGCACTACCTGATTaGTGGCTTGTGATGCCTCGG +
Preference number: 4 (lower is better)
Translates to: LKRPELKVPLWDLYQITLMALPD*WLVMPR
Trigger: CCGAGGCATCACAAGCCACCAATCAGGTAGTGCCAT...GAGAGTAATCTGATACAAGTCCCAGAGTGGAACTTTTAACTCAGGCCTTTTTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517373.1
CDS-3UTR TCA 90 bp CTCTCTGTAGCAGAATCCAACCTCTTCATTAATACAATTCTTCAAGGCAATTCTCTGATTGGTGGCTTGTaGTGCCTCGGAGACATTCAC +
Preference number: 4 (lower is better)
Translates to: LSVAESNLFINTILQGNSLIGGL*CLGDIH
Trigger: GTGAATGTCTCCGAGGCATCACAAGCCACCAATCAG...AGAATTGCCTTGAAGAATTGTATTAATGAAGAGGTTGGATTCTGCTACAGAGAG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR TCA 90 bp CAGGCAAATGCATCCTCAGAGCTTTGCTGCATCTTTGCTATTAATTCTTATTTTTGCTTGAGTTGCGGGTaGAACCCTGATTGGTGGCTT +
Preference number: 4 (lower is better)
Translates to: QANASSELCCIFAINSYFCLSCG*NPDWWL
Trigger: AAGCCACCAATCAGGGTTTCACCCGCAACTCAAGCA...AAAATAAGAATTAATAGCAAAGATGCAGCAAAGCTCTGAGGATGCATTTGCCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR TCA 90 bp AGAATAAATATATCCCCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTGCGTTCATGCTCGTGGTaGCGGAGTTATAGTTGGTCT +
Preference number: 4 (lower is better)
Translates to: RINISPKYLGGTTLTNTLRSCSW*RSYSWS
Trigger: AGACCAACTATAACTCCGTCACCACGAGCATGAACG...CAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGGGGATATATTTATTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000622875.4
CDS-3UTR TCA 90 bp GCAGATCCCTCTTCCAATTTCAGTATTTGCAAGGTCGGTGATTTTGTTTGTTTACGTTCATGCTCGTGGTaGCGGAGTTATAGTTGGTCT +
Preference number: 4 (lower is better)
Translates to: ADPSSNFSICKVGDFVCLRSCSW*RSYSWS
Trigger: AGACCAACTATAACTCCGTCACCACGAGCATGAACG...TAAACAAACAAAATCACCGACCTTGCAAATACTGAAATTGGAAGAGGGATCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000622875.4
CDS-3UTR TCA 90 bp CCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTTATTATTTCTCACCATaGAAAACAGCTTTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: PKYLGGTTLTNTLHLQIPYYFSP*KTAFLP
Trigger: AGGGAGGAAAGCTGTTTTTCATGGTGAGAAATAATA...AGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR GCA 90 bp TTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCAATTTCAGTATTTGCAAGTTCCACTCCGTTGGATaGTTTCCTGAATCCCAAACA +
Preference number: 4 (lower is better)
Translates to: FNQHPALADPSSNFSICKFHSVG*FPESQT
Trigger: TGTTTGGGATTCAGGAAAGCATCCAACGGAGTGGAA...CTTGCAAATACTGAAATTGGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
CDS-3UTR GCA 90 bp AGAATAAATATATCCCCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTGCCGTCCTTATCCCATTaGTGTAGAGAAGCTGAAGCC +
Preference number: 4 (lower is better)
Translates to: RINISPKYLGGTTLTNTLPSLSH*CREAEA
Trigger: GGCTTCAGCTTCTCTACAGCAATGGGATAAGGACGG...CAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGGGGATATATTTATTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
CDS-3UTR GCA 90 bp AGAATAAATATATCCCCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTGCATGTTATCAGAGACTaGCAGGACATGGCCATCCAC +
Preference number: 4 (lower is better)
Translates to: RINISPKYLGGTTLTNTLHVIRD*QDMAIH
Trigger: GTGGATGGCCATGTCCTGGCAGTCTCTGATAACATG...CAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGGGGATATATTTATTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR GCA 90 bp TTAAAAAGGCCTGAGTTAAAAGTTCCACTCTGGGACTTGTATCAGATTACTCTCCATGTTATCAGAGACTaGCAGGACATGGCCATCCAC +
Preference number: 4 (lower is better)
Translates to: LKRPELKVPLWDLYQITLHVIRD*QDMAIH
Trigger: GTGGATGGCCATGTCCTGGCAGTCTCTGATAACATG...GAGAGTAATCTGATACAAGTCCCAGAGTGGAACTTTTAACTCAGGCCTTTTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR GCA 90 bp AGAATAAATATATCCCCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTGCGAGCCCTCCGCCCATaGTTGGAATTATTATGGACA +
Preference number: 4 (lower is better)
Translates to: RINISPKYLGGTTLTNTLRALRP*LELLWT
Trigger: TGTCCATAATAATTCCAAGCATGGGCGGAGGGCTCG...CAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGGGGATATATTTATTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR GCA 90 bp AATAAATATATCCCCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTGCACGAGCCCTCCGCCCATaGTTGGAATTATTATGGACA +
Preference number: 4 (lower is better)
Translates to: NKYIPQILGRYNFNQHPARALRP*LELLWT
Trigger: TGTCCATAATAATTCCAAGCATGGGCGGAGGGCTCG...TGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGGGGATATATTTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR GCA 90 bp TCACTTACATCGCGTTTTAACTTTCCAGGCTGCATTTATTTACACAGTTGCTTACTCACACAGTATGTGTaGCACCAAGCTCTCGAGAGG +
Preference number: 4 (lower is better)
Translates to: SLTSRFNFPGCIYLHSCLLTQYV*HQALER
Trigger: CCTCTCGAGAGCTTGGTGGCACACATACTGTGTGAG...TAAGCAACTGTGTAAATAAATGCAGCCTGGAAAGTTAAAACGCGATGTAAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR CCA 90 bp TCACTTACATCGCGTTTTAACTTTCCAGGCTGCATTTATTTACACAGTTGCTTAGTAGACACCACGACCTaGAATCTCCGCATGTCACGT +
Preference number: 4 (lower is better)
Translates to: SLTSRFNFPGCIYLHSCLVDTTT*NLRMSR
Trigger: ACGTGACATGCGGAGATTCCAGGTCGTGGTGTCTAC...TAAGCAACTGTGTAAATAAATGCAGCCTGGAAAGTTAAAACGCGATGTAAGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR CCA 90 bp TTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCAATTTCAGTATTTGCAAGCCCTCCGCCCATGCTTaGAATTATTATGGACAAACA +
Preference number: 4 (lower is better)
Translates to: FNQHPALADPSSNFSICKPSAHA*NYYGQT
Trigger: TGTTTGTCCATAATAATTCCAAGCATGGGCGGAGGG...CTTGCAAATACTGAAATTGGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR CCA 90 bp AGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCAATTTCAGTTTCAGAATGATTTCCTaGTTGTTGTGTGGCATCCCA +
Preference number: 4 (lower is better)
Translates to: RYNFNQHPALADPSSNFSFRMIS*LLCGIP
Trigger: TGGGATGCCACACAACAACCAGGAAATCATTCTGAA...ACTGAAATTGGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR CCA 90 bp CAGAATAAATATATCCCCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTGCGTACGTGAGGTTTTaGCTTGTTAACTGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: QNKYIPQILGRYNFNQHPAYVRF*LVNWRA
Trigger: TGCCCTCCAGTTAACAAGCCAAAACCTCACGTACGC...AGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGGGGATATATTTATTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR CCA 90 bp AATGTGAGGCCAGGGCAATGTTATGCAATCCAGTCATCCAGAAGCTGTATTTTTATTGCAAAATCCATATaGGGGCATGCACAGTTGCAG +
Preference number: 4 (lower is better)
Translates to: NVRPGQCYAIQSSRSCIFIAKSI*GHAQLQ
Trigger: CTGCAACTGTGCATGCCCCCATATGGATTTTGCAAT...AAAAATACAGCTTCTGGATGACTGGATTGCATAACATTGCCCTGGCCTCACATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR TCA 90 bp CTCTTAAAAAGGCCTGAGTTAAAAGTTCCACTCTGGGACTTGTATCAGATTACTTTGTCATGGAGTCAATaGGGCGCACGTAGAAATCCT +
Preference number: 4 (lower is better)
Translates to: LLKRPELKVPLWDLYQITLSWSQ*GARRNP
Trigger: AGGATTTCTACGTGCGCCTCATTGACTCCATGACAA...AGTAATCTGATACAAGTCCCAGAGTGGAACTTTTAACTCAGGCCTTTTTAAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
CDS-3UTR TCA 90 bp AGAATAAATATATCCCCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTGATTTGTAGGACAGTGTaGCTTCCACAACACCAGGGA +
Preference number: 4 (lower is better)
Translates to: RINISPKYLGGTTLTNTLICRTV*LPQHQG
Trigger: TCCCTGGTGTTGTGGAAGTCACACTGTCCTACAAAT...CAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGGGGATATATTTATTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR TCA 90 bp CTCTTAAAAAGGCCTGAGTTAAAAGTTCCACTCTGGGACTTGTATCAGATTACTATTTGTAGGACAGTGTaGCTTCCACAACACCAGGGA +
Preference number: 4 (lower is better)
Translates to: LLKRPELKVPLWDLYQITICRTV*LPQHQG
Trigger: TCCCTGGTGTTGTGGAAGTCACACTGTCCTACAAAT...AGTAATCTGATACAAGTCCCAGAGTGGAACTTTTAACTCAGGCCTTTTTAAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR TCA 90 bp GCAGATCCCTCTTCCAATTTCAGTATTTGCAAGGTCGGTGATTTTGTTTGTTTAATTTGTAGGACAGTGTaGCTTCCACAACACCAGGGA +
Preference number: 4 (lower is better)
Translates to: ADPSSNFSICKVGDFVCLICRTV*LPQHQG
Trigger: TCCCTGGTGTTGTGGAAGTCACACTGTCCTACAAAT...TAAACAAACAAAATCACCGACCTTGCAAATACTGAAATTGGAAGAGGGATCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR TCA 90 bp GCAGATCCCTCTTCCAATTTCAGTATTTGCAAGGTCGGTGATTTTGTTTGTTTAGATCCGCAGCCCTTTTaGGTATTACTTCCTTTGGCA +
Preference number: 4 (lower is better)
Translates to: ADPSSNFSICKVGDFVCLDPQPF*VLLPLA
Trigger: TGCCAAAGGAAGTAATACTCAAAAGGGCTGCGGATC...TAAACAAACAAAATCACCGACCTTGCAAATACTGAAATTGGAAGAGGGATCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR TCA 90 bp CTCTTAAAAAGGCCTGAGTTAAAAGTTCCACTCTGGGACTTGTATCAGATTACTCCGCTCTCTTCAGAATaGTTTCCTGGTTGTTGTGTG +
Preference number: 4 (lower is better)
Translates to: LLKRPELKVPLWDLYQITPLSSE*FPGCCV
Trigger: CACACAACAACCAGGAAATCATTCTGAAGAGAGCGG...AGTAATCTGATACAAGTCCCAGAGTGGAACTTTTAACTCAGGCCTTTTTAAGAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR TCA 90 bp AATAAATATATCCCCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTGCACCGCTCTCTTCAGAATaGTTTCCTGGTTGTTGTGTG +
Preference number: 4 (lower is better)
Translates to: NKYIPQILGRYNFNQHPAPLSSE*FPGCCV
Trigger: CACACAACAACCAGGAAATCATTCTGAAGAGAGCGG...TGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGGGGATATATTTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR TCA 90 bp CAGAATAAATATATCCCCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTCTGGACCCTGTTCCATaGAGTCTCAAAGGAGATTCT +
Preference number: 4 (lower is better)
Translates to: QNKYIPQILGRYNFNQHPLDPVP*SLKGDS
Trigger: AGAATCTCCTTTGAGACTTCATGGAACAGGGTCCAG...AGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGGGGATATATTTATTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR GCA 90 bp AGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCAATTTCAGTAACTACCATTTGATATaGTTTAAGGCGCAAAAGCCG +
Preference number: 4 (lower is better)
Translates to: RYNFNQHPALADPSSNFSNYHLI*FKAQKP
Trigger: CGGCTTTTGCGCCTTAAAGCATATCAAATGGTAGTT...ACTGAAATTGGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR GCA 90 bp GCAGATCCCTCTTCCAATTTCAGTATTTGCAAGGTCGGTGATTTTGTTTGTTTAGCCAGGGCAATGTTATaGAATCCAGTCATCCAGAAG +
Preference number: 4 (lower is better)
Translates to: ADPSSNFSICKVGDFVCLARAML*NPVIQK
Trigger: CTTCTGGATGACTGGATTGCATAACATTGCCCTGGC...TAAACAAACAAAATCACCGACCTTGCAAATACTGAAATTGGAAGAGGGATCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR CCA 90 bp CAGAATAAATATATCCCCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTGAGTATTACTTCCTTTaGCAAACGCTCAGGGTCACC +
Preference number: 4 (lower is better)
Translates to: QNKYIPQILGRYNFNQHPEYYFL*QTLRVT
Trigger: GGTGACCCTGAGCGTTTGCCAAAGGAAGTAATACTC...AGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGGGGATATATTTATTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR CCA 90 bp GGGTCGACTGATAGAGGCAGTATCTGGAATGGGAAAATCGAAAATACCTGCCACTTAAAAGTTCCACTCTaGGACTTGTATCAGATTACT +
Preference number: 4 (lower is better)
Translates to: GSTDRGSIWNGKIENTCHLKVPL*DLYQIT
Trigger: AGTAATCTGATACAAGTCCCAGAGTGGAACTTTTAA...GTGGCAGGTATTTTCGATTTTCCCATTCCAGATACTGCCTCTATCAGTCGACCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR TCA 90 bp AGAATAAATATATCCCCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTGGCATGGTACCGAATATaGCCTGTAACCCATCAAAGA +
Preference number: 4 (lower is better)
Translates to: RINISPKYLGGTTLTNTLAWYRI*PVTHQR
Trigger: TCTTTGATGGGTTACAGGTCATATTCGGTACCATGC...CAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGGGGATATATTTATTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR TCA 90 bp TCACTTACATCGCGTTTTAACTTTCCAGGCTGCATTTATTTACACAGTTGCTTAGATCCGCAGCCCTTTTaGGTATTACTTCCTTTGGCA +
Preference number: 4 (lower is better)
Translates to: SLTSRFNFPGCIYLHSCLDPQPF*VLLPLA
Trigger: TGCCAAAGGAAGTAATACTCAAAAGGGCTGCGGATC...TAAGCAACTGTGTAAATAAATGCAGCCTGGAAAGTTAAAACGCGATGTAAGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR TCA 90 bp CTCTCTGTAGCAGAATCCAACCTCTTCATTAATACAATTCTTCAAGGCAATTCTCCGCTCTCTTCAGAATaGTTTCCTGGTTGTTGTGTG +
Preference number: 4 (lower is better)
Translates to: LSVAESNLFINTILQGNSPLSSE*FPGCCV
Trigger: CACACAACAACCAGGAAATCATTCTGAAGAGAGCGG...AGAATTGCCTTGAAGAATTGTATTAATGAAGAGGTTGGATTCTGCTACAGAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR TCA 90 bp AGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCAATTTCAGTAATCTGCAGTTATTGTaGTTCCTCTTAAAAAGGCCT +
Preference number: 4 (lower is better)
Translates to: RYNFNQHPALADPSSNFSNLQLL*FLLKRP
Trigger: AGGCCTTTTTAAGAGGAATCACAATAACTGCAGATT...ACTGAAATTGGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR TCA 90 bp CTCTCTGTAGCAGAATCCAACCTCTTCATTAATACAATTCTTCAAGGCAATTCTCTGGACCCTGTTCCATaGAGTCTCAAAGGAGATTCT +
Preference number: 4 (lower is better)
Translates to: LSVAESNLFINTILQGNSLDPVP*SLKGDS
Trigger: AGAATCTCCTTTGAGACTTCATGGAACAGGGTCCAG...AGAATTGCCTTGAAGAATTGTATTAATGAAGAGGTTGGATTCTGCTACAGAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR GCA 90 bp CAGAATAAATATATCCCCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTTTCCACTCCGTTGGATaGTTTCCTGAATCCCAAACA +
Preference number: 4 (lower is better)
Translates to: QNKYIPQILGRYNFNQHPFHSVG*FPESQT
Trigger: TGTTTGGGATTCAGGAAAGCATCCAACGGAGTGGAA...AGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGGGGATATATTTATTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
CDS-3UTR GCA 90 bp TTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCAATTTCAGTATTTGCAAGAAAATATCAGGCAAATaGATCCTCAGAGCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: FNQHPALADPSSNFSICKKISGK*ILRALL
Trigger: CAGCAAAGCTCTGAGGATGCATTTGCCTGATATTTT...CTTGCAAATACTGAAATTGGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR GCA 90 bp CAGGCAAATGCATCCTCAGAGCTTTGCTGCATCTTTGCTATTAATTCTTATTTTATCCATATGGGGGCATaGACAGTTGCAGCATTGTTG +
Preference number: 4 (lower is better)
Translates to: QANASSELCCIFAINSYFIHMGA*TVAALL
Trigger: CAACAATGCTGCAACTGTGCATGCCCCCATATGGAT...AAAATAAGAATTAATAGCAAAGATGCAGCAAAGCTCTGAGGATGCATTTGCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR GCA 90 bp TCACTTACATCGCGTTTTAACTTTCCAGGCTGCATTTATTTACACAGTTGCTTAATCCATATGGGGGCATaGACAGTTGCAGCATTGTTG +
Preference number: 4 (lower is better)
Translates to: SLTSRFNFPGCIYLHSCLIHMGA*TVAALL
Trigger: CAACAATGCTGCAACTGTGCATGCCCCCATATGGAT...TAAGCAACTGTGTAAATAAATGCAGCCTGGAAAGTTAAAACGCGATGTAAGTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR GCA 90 bp CTCTTAAAAAGGCCTGAGTTAAAAGTTCCACTCTGGGACTTGTATCAGATTACTAGTACCGAGAAGCAATaGGTCCACCTTGCTTACATT +
Preference number: 4 (lower is better)
Translates to: LLKRPELKVPLWDLYQITSTEKQ*VHLAYI
Trigger: AATGTAAGCAAGGTGGACGCATTGCTTCTCGGTACT...AGTAATCTGATACAAGTCCCAGAGTGGAACTTTTAACTCAGGCCTTTTTAAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR GCA 90 bp TCACTTACATCGCGTTTTAACTTTCCAGGCTGCATTTATTTACACAGTTGCTTAAAGAGTTCTAACCACTaGACATGGCTGACAGATGGG +
Preference number: 4 (lower is better)
Translates to: SLTSRFNFPGCIYLHSCLKSSNH*TWLTDG
Trigger: CCCATCTGTCAGCCATGTGCAGTGGTTAGAACTCTT...TAAGCAACTGTGTAAATAAATGCAGCCTGGAAAGTTAAAACGCGATGTAAGTGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR CCA 90 bp CAGGCAAATGCATCCTCAGAGCTTTGCTGCATCTTTGCTATTAATTCTTATTTTTGTATGCTTGGCTGTTaGGGGTTGTTTGGTTGGTTG +
Preference number: 4 (lower is better)
Translates to: QANASSELCCIFAINSYFCMLGC*GLFGWL
Trigger: CAACCAACCAAACAACCCCCAACAGCCAAGCATACA...AAAATAAGAATTAATAGCAAAGATGCAGCAAAGCTCTGAGGATGCATTTGCCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000313708.11
CDS-3UTR CCA 90 bp GCAGATCCCTCTTCCAATTTCAGTATTTGCAAGGTCGGTGATTTTGTTTGTTTATCTGGGTTCTTGTCTTaGCCTTCATACACTATGGCT +
Preference number: 4 (lower is better)
Translates to: ADPSSNFSICKVGDFVCLSGFLS*PSYTMA
Trigger: AGCCATAGTGTATGAAGGCCAAGACAAGAACCCAGA...TAAACAAACAAAATCACCGACCTTGCAAATACTGAAATTGGAAGAGGGATCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
CDS-3UTR CCA 90 bp GCAGATCCCTCTTCCAATTTCAGTATTTGCAAGGTCGGTGATTTTGTTTGTTTACCCTCCGCCCATGCTTaGAATTATTATGGACAAACA +
Preference number: 4 (lower is better)
Translates to: ADPSSNFSICKVGDFVCLPSAHA*NYYGQT
Trigger: TGTTTGTCCATAATAATTCCAAGCATGGGCGGAGGG...TAAACAAACAAAATCACCGACCTTGCAAATACTGAAATTGGAAGAGGGATCTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR CCA 90 bp AATGTGAGGCCAGGGCAATGTTATGCAATCCAGTCATCCAGAAGCTGTATTTTTTGCACTGCTAAGGGGTaGCATGTTAAGTTAGATATT +
Preference number: 4 (lower is better)
Translates to: NVRPGQCYAIQSSRSCIFCTAKG*HVKLDI
Trigger: AATATCTAACTTAACATGCCACCCCTTAGCAGTGCA...AAAAATACAGCTTCTGGATGACTGGATTGCATAACATTGCCCTGGCCTCACATT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR CCA 90 bp AGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCAATTTCAGTGATAGAGGCAGTATCTaGAATGGGAAAATCGAAAAT +
Preference number: 4 (lower is better)
Translates to: RYNFNQHPALADPSSNFSDRGSI*NGKIEN
Trigger: ATTTTCGATTTTCCCATTCCAGATACTGCCTCTATC...ACTGAAATTGGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR TCA 90 bp TCACTTACATCGCGTTTTAACTTTCCAGGCTGCATTTATTTACACAGTTGCTTAGCATGGTACCGAATATaGCCTGTAACCCATCAAAGA +
Preference number: 4 (lower is better)
Translates to: SLTSRFNFPGCIYLHSCLAWYRI*PVTHQR
Trigger: TCTTTGATGGGTTACAGGTCATATTCGGTACCATGC...TAAGCAACTGTGTAAATAAATGCAGCCTGGAAAGTTAAAACGCGATGTAAGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR TCA 90 bp TTAAAAAGGCCTGAGTTAAAAGTTCCACTCTGGGACTTGTATCAGATTACTCTCCCTCTTAAAAAGGCCTaGGTTAAAAGTTCCACTCTG +
Preference number: 4 (lower is better)
Translates to: LKRPELKVPLWDLYQITLPLKKA*VKSSTL
Trigger: CAGAGTGGAACTTTTAACTCAGGCCTTTTTAAGAGG...GAGAGTAATCTGATACAAGTCCCAGAGTGGAACTTTTAACTCAGGCCTTTTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR TCA 90 bp CAGAATAAATATATCCCCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTCCTCTTAAAAAGGCCTaGGTTAAAAGTTCCACTCTG +
Preference number: 4 (lower is better)
Translates to: QNKYIPQILGRYNFNQHPPLKKA*VKSSTL
Trigger: CAGAGTGGAACTTTTAACTCAGGCCTTTTTAAGAGG...AGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGGGGATATATTTATTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR TCA 90 bp AGAATAAATATATCCCCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTGAATGTTAGTGATGACTaGCAGTTCTGGTGCACAGTT +
Preference number: 4 (lower is better)
Translates to: RINISPKYLGGTTLTNTLNVSDD*QFWCTV
Trigger: AACTGTGCACCAGAACTGTCAGTCATCACTAACATT...CAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGGGGATATATTTATTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR CCA 90 bp GCAGATCCCTCTTCCAATTTCAGTATTTGCAAGGTCGGTGATTTTGTTTGTTTAGGCCTTCATACACTATaGCTTGTTTTGTCATGGAGT +
Preference number: 4 (lower is better)
Translates to: ADPSSNFSICKVGDFVCLGLHTL*LVLSWS
Trigger: ACTCCATGACAAAACAAGCCATAGTGTATGAAGGCC...TAAACAAACAAAATCACCGACCTTGCAAATACTGAAATTGGAAGAGGGATCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
CDS-3UTR CCA 90 bp TCACTTACATCGCGTTTTAACTTTCCAGGCTGCATTTATTTACACAGTTGCTTATCTGGGTTCTTGTCTTaGCCTTCATACACTATGGCT +
Preference number: 4 (lower is better)
Translates to: SLTSRFNFPGCIYLHSCLSGFLS*PSYTMA
Trigger: AGCCATAGTGTATGAAGGCCAAGACAAGAACCCAGA...TAAGCAACTGTGTAAATAAATGCAGCCTGGAAAGTTAAAACGCGATGTAAGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000313708.11
CDS-3UTR CCA 90 bp CAGGCAAATGCATCCTCAGAGCTTTGCTGCATCTTTGCTATTAATTCTTATTTTCCCTCCGCCCATGCTTaGAATTATTATGGACAAACA +
Preference number: 4 (lower is better)
Translates to: QANASSELCCIFAINSYFPSAHA*NYYGQT
Trigger: TGTTTGTCCATAATAATTCCAAGCATGGGCGGAGGG...AAAATAAGAATTAATAGCAAAGATGCAGCAAAGCTCTGAGGATGCATTTGCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR CCA 90 bp AGAATAAATATATCCCCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTGTTCAGAATGATTTCCTaGTTGTTGTGTGGCATCCCA +
Preference number: 4 (lower is better)
Translates to: RINISPKYLGGTTLTNTLFRMIS*LLCGIP
Trigger: TGGGATGCCACACAACAACCAGGAAATCATTCTGAA...CAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGGGGATATATTTATTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR CCA 90 bp GCAGATCCCTCTTCCAATTTCAGTATTTGCAAGGTCGGTGATTTTGTTTGTTTATTTTGGCTTGTTAACTaGAGGGCAGAGTGTGGAATT +
Preference number: 4 (lower is better)
Translates to: ADPSSNFSICKVGDFVCLFWLVN*RAECGI
Trigger: AATTCCACACTCTGCCCTCCAGTTAACAAGCCAAAA...TAAACAAACAAAATCACCGACCTTGCAAATACTGAAATTGGAAGAGGGATCTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
3UTR CAA 72 bp TTAAAAAGGCCTGAGTTAAAAGTTCCACTCTGGGACTaGTATCAGATTACTCTCTGTAGCAGAATCCAACCT +
Preference number: 4 (lower is better)
Translates to: LKRPELKVPLWD*YQITLCSRIQP
Trigger: AGGTTGGATTCTGCTACAGAGAGTAATCTGATACAAGTCCCAGAGTGGAACTTTTAACTCAGGCCTTTTTAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR TCA 90 bp TTAAAAAGGCCTGAGTTAAAAGTTCCACTCTGGGACTTGTATCAGATTACTCTCCCTGAATCCCAAACATaGAAACAACCTTTTCTTGTG +
Preference number: 4 (lower is better)
Translates to: LKRPELKVPLWDLYQITLPESQT*KQPFLV
Trigger: CACAAGAAAAGGTTGTTTTCATGTTTGGGATTCAGG...GAGAGTAATCTGATACAAGTCCCAGAGTGGAACTTTTAACTCAGGCCTTTTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
CDS-3UTR TCA 90 bp GCAGATCCCTCTTCCAATTTCAGTATTTGCAAGGTCGGTGATTTTGTTTGTTTAGAGCTAACTACCATTTaGTATGCTTTAAGGCGCAAA +
Preference number: 4 (lower is better)
Translates to: ADPSSNFSICKVGDFVCLELTTI*YALRRK
Trigger: TTTGCGCCTTAAAGCATATCAAATGGTAGTTAGCTC...TAAACAAACAAAATCACCGACCTTGCAAATACTGAAATTGGAAGAGGGATCTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR TCA 90 bp TTAAAAAGGCCTGAGTTAAAAGTTCCACTCTGGGACTTGTATCAGATTACTCTCGTAGAGGGAAAAATGTaGTCACTTACATCGCGTTTT +
Preference number: 4 (lower is better)
Translates to: LKRPELKVPLWDLYQITLVEGKM*SLTSRF
Trigger: AAAACGCGATGTAAGTGATCACATTTTTCCCTCTAC...GAGAGTAATCTGATACAAGTCCCAGAGTGGAACTTTTAACTCAGGCCTTTTTAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR TCA 90 bp AATAAATATATCCCCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTGCAAGGTTCTCTAACAATTaGACTGTACAGTGTGTGTCT +
Preference number: 4 (lower is better)
Translates to: NKYIPQILGRYNFNQHPARFSNN*TVQCVS
Trigger: AGACACACACTGTACAGTTCAATTGTTAGAGAACCT...TGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGGGGATATATTTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR TCA 90 bp CTCTTAAAAAGGCCTGAGTTAAAAGTTCCACTCTGGGACTTGTATCAGATTACTAGGTTCTCTAACAATTaGACTGTACAGTGTGTGTCT +
Preference number: 4 (lower is better)
Translates to: LLKRPELKVPLWDLYQITRFSNN*TVQCVS
Trigger: AGACACACACTGTACAGTTCAATTGTTAGAGAACCT...AGTAATCTGATACAAGTCCCAGAGTGGAACTTTTAACTCAGGCCTTTTTAAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR GCA 90 bp GCAGATCCCTCTTCCAATTTCAGTATTTGCAAGGTCGGTGATTTTGTTTGTTTAGCATCCTCAGAGCTTTaGTGCATCTTTGCTATTAAT +
Preference number: 4 (lower is better)
Translates to: ADPSSNFSICKVGDFVCLASSEL*CIFAIN
Trigger: ATTAATAGCAAAGATGCAGCAAAGCTCTGAGGATGC...TAAACAAACAAAATCACCGACCTTGCAAATACTGAAATTGGAAGAGGGATCTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR GCA 90 bp AGAATAAATATATCCCCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTGAAAATATCAGGCAAATaGATCCTCAGAGCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: RINISPKYLGGTTLTNTLKISGK*ILRALL
Trigger: CAGCAAAGCTCTGAGGATGCATTTGCCTGATATTTT...CAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGGGGATATATTTATTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR CCA 90 bp CTCTTAAAAAGGCCTGAGTTAAAAGTTCCACTCTGGGACTTGTATCAGATTACTAGTGAATTCCGTTATTaGTCTTTTCGCTGTTGGCTT +
Preference number: 4 (lower is better)
Translates to: LLKRPELKVPLWDLYQITSEFRY*SFRCWL
Trigger: AAGCCAACAGCGAAAAGACCAATAACGGAATTCACT...AGTAATCTGATACAAGTCCCAGAGTGGAACTTTTAACTCAGGCCTTTTTAAGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
CDS-3UTR CCA 90 bp CTCTCTGTAGCAGAATCCAACCTCTTCATTAATACAATTCTTCAAGGCAATTCTTTCAGAATGATTTCCTaGTTGTTGTGTGGCATCCCA +
Preference number: 4 (lower is better)
Translates to: LSVAESNLFINTILQGNSFRMIS*LLCGIP
Trigger: TGGGATGCCACACAACAACCAGGAAATCATTCTGAA...AGAATTGCCTTGAAGAATTGTATTAATGAAGAGGTTGGATTCTGCTACAGAGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR CCA 90 bp AATAAATATATCCCCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTGCATGCACTGCTAAGGGGTaGCATGTTAAGTTAGATATT +
Preference number: 4 (lower is better)
Translates to: NKYIPQILGRYNFNQHPACTAKG*HVKLDI
Trigger: AATATCTAACTTAACATGCCACCCCTTAGCAGTGCA...TGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGGGGATATATTTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR TCA 90 bp AGAATAAATATATCCCCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTGAATCTGCAGTTATTGTaGTTCCTCTTAAAAAGGCCT +
Preference number: 4 (lower is better)
Translates to: RINISPKYLGGTTLTNTLNLQLL*FLLKRP
Trigger: AGGCCTTTTTAAGAGGAATCACAATAACTGCAGATT...CAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGGGGATATATTTATTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR TCA 90 bp GCAGATCCCTCTTCCAATTTCAGTATTTGCAAGGTCGGTGATTTTGTTTGTTTATATTATTTCTCACCATaGAAAACAGCTTTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: ADPSSNFSICKVGDFVCLYYFSP*KTAFLP
Trigger: AGGGAGGAAAGCTGTTTTTCATGGTGAGAAATAATA...TAAACAAACAAAATCACCGACCTTGCAAATACTGAAATTGGAAGAGGGATCTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR GCA 90 bp TCACTTACATCGCGTTTTAACTTTCCAGGCTGCATTTATTTACACAGTTGCTTAGCATCCTCAGAGCTTTaGTGCATCTTTGCTATTAAT +
Preference number: 4 (lower is better)
Translates to: SLTSRFNFPGCIYLHSCLASSEL*CIFAIN
Trigger: ATTAATAGCAAAGATGCAGCAAAGCTCTGAGGATGC...TAAGCAACTGTGTAAATAAATGCAGCCTGGAAAGTTAAAACGCGATGTAAGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR GCA 90 bp TTAAAAAGGCCTGAGTTAAAAGTTCCACTCTGGGACTTGTATCAGATTACTCTCTCCAATTTCAGTATTTaGAAGGTCGGTGATTTTGTT +
Preference number: 4 (lower is better)
Translates to: LKRPELKVPLWDLYQITLSNFSI*KVGDFV
Trigger: AACAAAATCACCGACCTTGCAAATACTGAAATTGGA...GAGAGTAATCTGATACAAGTCCCAGAGTGGAACTTTTAACTCAGGCCTTTTTAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR GCA 90 bp AATAAATATATCCCCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTGCATCCAATTTCAGTATTTaGAAGGTCGGTGATTTTGTT +
Preference number: 4 (lower is better)
Translates to: NKYIPQILGRYNFNQHPASNFSI*KVGDFV
Trigger: AACAAAATCACCGACCTTGCAAATACTGAAATTGGA...TGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGGGGATATATTTATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR CCA 90 bp CTCTTAAAAAGGCCTGAGTTAAAAGTTCCACTCTGGGACTTGTATCAGATTACTTTAAAAGTTCCACTCTaGGACTTGTATCAGATTACT +
Preference number: 4 (lower is better)
Translates to: LLKRPELKVPLWDLYQITLKVPL*DLYQIT
Trigger: AGTAATCTGATACAAGTCCCAGAGTGGAACTTTTAA...AGTAATCTGATACAAGTCCCAGAGTGGAACTTTTAACTCAGGCCTTTTTAAGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR CCA 90 bp CAGAATAAATATATCCCCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTTTAAAAGTTCCACTCTaGGACTTGTATCAGATTACT +
Preference number: 4 (lower is better)
Translates to: QNKYIPQILGRYNFNQHPLKVPL*DLYQIT
Trigger: AGTAATCTGATACAAGTCCCAGAGTGGAACTTTTAA...AGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGGGGATATATTTATTCTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR CCA 90 bp CTCTCTGTAGCAGAATCCAACCTCTTCATTAATACAATTCTTCAAGGCAATTCTTTAAAAGTTCCACTCTaGGACTTGTATCAGATTACT +
Preference number: 4 (lower is better)
Translates to: LSVAESNLFINTILQGNSLKVPL*DLYQIT
Trigger: AGTAATCTGATACAAGTCCCAGAGTGGAACTTTTAA...AGAATTGCCTTGAAGAATTGTATTAATGAAGAGGTTGGATTCTGCTACAGAGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS TCA 90 bp GGCTGGATGGCACTATGGCATAGGGGGAGTTGGCAGCTGAGCCGTTaGGGAAGGTGGGGGAGCCGCCCAAATTGGACATTGCGGCAGAGC +
Preference number: 5 (lower is better)
Translates to: GWMALWHRGSWQLSR*GRWGSRPNWTLRQS
Trigger: GCTCTGCCGCAATGTCCAATTTGGGCGGCTCCCCCACCTTCCTCAACGGCTCAGCTGCCAACTCCCCCTATGCCATAGTGCCATCCAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000518836.5
ENST00000519739.5
ENST00000519890.5
ENST00000522192.5
ENST00000622875.4
CDS CCA 90 bp CCCCTCGAATCTCACGTCTCAGCTAGCAGGGCAGGTGGGAATGGATaGAAAACATGCTCGGCGTCTCGCCGCAGCAGCCACCCTCCAGGA +
Preference number: 5 (lower is better)
Translates to: PLESHVSASRAGGNG*KTCSASRRSSHPPG
Trigger: TCCTGGAGGGTGGCTGCTGCGGCGAGACGCCGAGCATGTTTTCCATCCATTCCCACCTGCCCTGCTAGCTGAGACGTGAGATTCGAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523315.1
CDS-3UTR CAA 90 bp TGTTGTCAAGGTCTAAGCCGGACACCTTCCCGGCTGACCGTTCATTCCTTCAGAAGCAAGGGCCGGGAGTaGGTTGTGGTTGCGGGGAAC +
Preference number: 5 (lower is better)
Translates to: CCQGLSRTPSRLTVHSFRSKGRE*VVVAGN
Trigger: GTTCCCCGCAACCACAACCAACTCCCGGCCCTTGCT...TCTGAAGGAATGAACGGTCAGCCGGGAAGGTGTCCGGCTTAGACCTTGACAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS TCA 90 bp GCATCAGGACGCAAAGACACAAGAGATGCAGGAGAGAGGTCTGCGTaGGCGAGTGGACCAACTTTCGAGGCAACTTTCCCCAAGCCGGGA +
Preference number: 5 (lower is better)
Translates to: ASGRKDTRDAGERSA*ASGPTFEATFPKPG
Trigger: TCCCGGCTTGGGGAAAGTTGCCTCGAAAGTTGGTCCACTCGCTCACGCAGACCTCTCTCCTGCATCTCTTGTGTCTTTGCGTCCTGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522192.5
CDS GCA 90 bp GCTGTTGGCTTCCTGGGTTGCATCAGGACGCAAAGACACAAGAGATaGAGGAGAGAGGTCTGCGTGAGCGAGTGGACCAACTTTCGAGGC +
Preference number: 5 (lower is better)
Translates to: AVGFLGCIRTQRHKR*RREVCVSEWTNFRG
Trigger: GCCTCGAAAGTTGGTCCACTCGCTCACGCAGACCTCTCTCCTGCATCTCTTGTGTCTTTGCGTCCTGATGCAACCCAGGAAGCCAACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522192.5
CDS-3UTR CAA 90 bp AATGTGAGGCCAGGGCAATGTTATGCAATCCAGTCATCCAGAAGCTGTATTTTTCTCTGCGCCGCCGTGTaGGCGTCCAGCACCCCGGCG +
Preference number: 5 (lower is better)
Translates to: NVRPGQCYAIQSSRSCIFLCAAV*ASSTPA
Trigger: CGCCGGGGTGCTGGACGCCAACACGGCGGCGCAGAG...AAAAATACAGCTTCTGGATGACTGGATTGCATAACATTGCCCTGGCCTCACATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000313708.11
CDS-3UTR CAA 90 bp GTCTCAAAGGAGATTCTCACACAGTATGTGTGCCACCAAGCTCTCGAGAGGCCAAGCAAGGGCCGGGAGTaGGTTGTGGTTGCGGGGAAC +
Preference number: 5 (lower is better)
Translates to: VSKEILTQYVCHQALERPSKGRE*VVVAGN
Trigger: GTTCCCCGCAACCACAACCAACTCCCGGCCCTTGCT...TGGCCTCTCGAGAGCTTGGTGGCACACATACTGTGTGAGAATCTCCTTTGAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS GCA 90 bp GGTTGCATCAGGACGCAAAGACACAAGAGATGCAGGAGAGAGGTCTaGGTGAGCGAGTGGACCAACTTTCGAGGCAACTTTCCCCAAGCC +
Preference number: 5 (lower is better)
Translates to: GCIRTQRHKRCRREV*VSEWTNFRGNFPQA
Trigger: GGCTTGGGGAAAGTTGCCTCGAAAGTTGGTCCACTCGCTCACGCAGACCTCTCTCCTGCATCTCTTGTGTCTTTGCGTCCTGATGCAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522192.5
CDS-3UTR CAA 90 bp ATACTTGGGAGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCGGGGAGCCGCCCAAATaGGACATTGCGGCAGAGCCG +
Preference number: 5 (lower is better)
Translates to: ILGRYNFNQHPALADPSSGEPPK*DIAAEP
Trigger: CGGCTCTGCCGCAATGTCCAATTTGGGCGGCTCCCC...GGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000622875.4
CDS-3UTR CAA 90 bp ATACTTGGGAGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCTTGGCAGCTGAGCCGTaGAGGAAGGTGGGGGAGCCG +
Preference number: 5 (lower is better)
Translates to: ILGRYNFNQHPALADPSSLAAEP*RKVGEP
Trigger: CGGCTCCCCCACCTTCCTCAACGGCTCAGCTGCCAA...GGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000622875.4
CDS-3UTR CAA 90 bp AATAAATATATCCCCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTGCACTCTGCGCCGCCGTGTaGGCGTCCAGCACCCCGGCG +
Preference number: 5 (lower is better)
Translates to: NKYIPQILGRYNFNQHPALCAAV*ASSTPA
Trigger: CGCCGGGGTGCTGGACGCCAACACGGCGGCGCAGAG...TGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGGGGATATATTTATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
CDS-3UTR CAA 90 bp AGAATAAATATATCCCCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTGCTCTGCGCCGCCGTGTaGGCGTCCAGCACCCCGGCG +
Preference number: 5 (lower is better)
Translates to: RINISPKYLGGTTLTNTLLCAAV*ASSTPA
Trigger: CGCCGGGGTGCTGGACGCCAACACGGCGGCGCAGAG...CAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGGGGATATATTTATTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
CDS-3UTR CAA 90 bp CCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTTGCAGGCTGTTCCCGTaGGTGCTGGTGCAGGTGGGA +
Preference number: 5 (lower is better)
Translates to: PKYLGGTTLTNTLHLQIPCRLFP*VLVQVG
Trigger: TCCCACCTGCACCAGCACCAACGGGAACAGCCTGCA...AGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR CAA 90 bp TGTTGTCAAGGTCTAAGCCGGACACCTTCCCGGCTGACCGTTCATTCCTTCAGACATGCCAGATATCGCTaGCAGGCTGTTCCCGTTGGT +
Preference number: 5 (lower is better)
Translates to: CCQGLSRTPSRLTVHSFRHARYR*QAVPVG
Trigger: ACCAACGGGAACAGCCTGCAAGCGATATCTGGCATG...TCTGAAGGAATGAACGGTCAGCCGGGAAGGTGTCCGGCTTAGACCTTGACAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS GCA 90 bp CATGCCAGATATCGTTCAGGAGAAGGCCAGTCCCGGGAGAGACCCTaGACTGGAGAACTTGCTAGAGTCCACAAAAGACTGATCTTGCAG +
Preference number: 5 (lower is better)
Translates to: HARYRSGEGQSRERP*TGELARVHKRLILQ
Trigger: CTGCAAGATCAGTCTTTTGTGGACTCTAGCAAGTTCTCCAGTGCAGGGTCTCTCCCGGGACTGGCCTTCTCCTGAACGATATCTGGCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518323.1
CDS CCA 90 bp ACAGCGGCTGGCAATCAACGGATCCCTGGGACAGATAATTCTATTTaGGTCACCTATGGGTTAATGGCCAGGCTTAACCTCTCCCTGCTC +
Preference number: 5 (lower is better)
Translates to: TAAGNQRIPGTDNSI*VTYGLMARLNLSLL
Trigger: GAGCAGGGAGAGGTTAAGCCTGGCCATTAACCCATAGGTGACCCAAATAGAATTATCTGTCCCAGGGATCCGTTGATTGCCAGCCGCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519890.5
CDS-3UTR CAA 90 bp AGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCAATTTCAGTAGGGCCGGGAGTTGGTaGTGGTTGCGGGGAACACTG +
Preference number: 5 (lower is better)
Translates to: RYNFNQHPALADPSSNFSRAGSW*WLRGTL
Trigger: CAGTGTTCCCCGCAACCACAACCAACTCCCGGCCCT...ACTGAAATTGGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR CAA 90 bp ATACTTGGGAGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCGCTGCTTCCACTCCGTaGGATGCTTTCCTGAATCCC +
Preference number: 5 (lower is better)
Translates to: ILGRYNFNQHPALADPSSAASTP*DAFLNP
Trigger: GGGATTCAGGAAAGCATCCAACGGAGTGGAAGCAGC...GGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
CDS-3UTR CAA 90 bp TTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCAATTTCAGTATTTGCAAGAGGGCCGGGAGTTGGTaGTGGTTGCGGGGAACACTG +
Preference number: 5 (lower is better)
Translates to: FNQHPALADPSSNFSICKRAGSW*WLRGTL
Trigger: CAGTGTTCCCCGCAACCACAACCAACTCCCGGCCCT...CTTGCAAATACTGAAATTGGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR CAA 90 bp TTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCAATTTCAGTATTTGCAAGAGCAAGGGCCGGGAGTaGGTTGTGGTTGCGGGGAAC +
Preference number: 5 (lower is better)
Translates to: FNQHPALADPSSNFSICKSKGRE*VVVAGN
Trigger: GTTCCCCGCAACCACAACCAACTCCCGGCCCTTGCT...CTTGCAAATACTGAAATTGGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR CAA 90 bp GTCTCAAAGGAGATTCTCACACAGTATGTGTGCCACCAAGCTCTCGAGAGGCCAGACATTCACGGCCAGTaGTCCACTGAACGAATTCAC +
Preference number: 5 (lower is better)
Translates to: VSKEILTQYVCHQALERPDIHGQ*STERIH
Trigger: GTGAATTCGTTCAGTGGACAACTGGCCGTGAATGTC...TGGCCTCTCGAGAGCTTGGTGGCACACATACTGTGTGAGAATCTCCTTTGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR CAA 90 bp ATACTTGGGAGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCCATGCCAGATATCGCTaGCAGGCTGTTCCCGTTGGT +
Preference number: 5 (lower is better)
Translates to: ILGRYNFNQHPALADPSSHARYR*QAVPVG
Trigger: ACCAACGGGAACAGCCTGCAAGCGATATCTGGCATG...GGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS CCA 90 bp GAAGCTGAAGCCGGTAGTGAATTCCGTTATTGGTCTTTTCGCTGTTaGCTTCCTGGGTTGCATCAGGACGCAAAGACACAAGAGATGCAG +
Preference number: 5 (lower is better)
Translates to: EAEAGSEFRYWSFRC*LPGLHQDAKTQEMQ
Trigger: CTGCATCTCTTGTGTCTTTGCGTCCTGATGCAACCCAGGAAGCCAACAGCGAAAAGACCAATAACGGAATTCACTACCGGCTTCAGCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522192.5
CDS-3UTR CAA 90 bp TGTTGTCAAGGTCTAAGCCGGACACCTTCCCGGCTGACCGTTCATTCCTTCAGAAGAATGATTTCCTGGTaGTTGTGTGGCATCCCATAC +
Preference number: 5 (lower is better)
Translates to: CCQGLSRTPSRLTVHSFRRMISW*LCGIPY
Trigger: GTATGGGATGCCACACAACAACCAGGAAATCATTCT...TCTGAAGGAATGAACGGTCAGCCGGGAAGGTGTCCGGCTTAGACCTTGACAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR CAA 90 bp TTAAAAAGGCCTGAGTTAAAAGTTCCACTCTGGGACTTGTATCAGATTACTCTCGGGGAGCCGCCCAAATaGGACATTGCGGCAGAGCCG +
Preference number: 5 (lower is better)
Translates to: LKRPELKVPLWDLYQITLGEPPK*DIAAEP
Trigger: CGGCTCTGCCGCAATGTCCAATTTGGGCGGCTCCCC...GAGAGTAATCTGATACAAGTCCCAGAGTGGAACTTTTAACTCAGGCCTTTTTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000622875.4
CDS-3UTR CAA 90 bp GCAGATCCCTCTTCCAATTTCAGTATTTGCAAGGTCGGTGATTTTGTTTGTTTATTGGCAGCTGAGCCGTaGAGGAAGGTGGGGGAGCCG +
Preference number: 5 (lower is better)
Translates to: ADPSSNFSICKVGDFVCLLAAEP*RKVGEP
Trigger: CGGCTCCCCCACCTTCCTCAACGGCTCAGCTGCCAA...TAAACAAACAAAATCACCGACCTTGCAAATACTGAAATTGGAAGAGGGATCTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000622875.4
CDS CCA 90 bp TCAAGAAGAACCTCCTCCGCAAAGACTATAAGCCGCCCCGGATCTTaGAGCTGTCCTATATTCCCTTTGCTACAAACATGCCTGTGTCTT +
Preference number: 5 (lower is better)
Translates to: SRRTSSAKTISRPGS*SCPIFPLLQTCLCL
Trigger: AAGACACAGGCATGTTTGTAGCAAAGGGAATATAGGACAGCTCCAAGATCCGGGGCGGCTTATAGTCTTTGCGGAGGAGGTTCTTCTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523464.1
CDS-3UTR CAA 90 bp CCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTGCCCTCCGCCCATGCTaGGAATTATTATGGACAAAC +
Preference number: 5 (lower is better)
Translates to: PKYLGGTTLTNTLHLQIPALRPC*ELLWTN
Trigger: GTTTGTCCATAATAATTCCAAGCATGGGCGGAGGGC...AGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR CAA 90 bp GGGTCGACTGATAGAGGCAGTATCTGGAATGGGAAAATCGAAAATACCTGCCACGCCCTCCGCCCATGCTaGGAATTATTATGGACAAAC +
Preference number: 5 (lower is better)
Translates to: GSTDRGSIWNGKIENTCHALRPC*ELLWTN
Trigger: GTTTGTCCATAATAATTCCAAGCATGGGCGGAGGGC...GTGGCAGGTATTTTCGATTTTCCCATTCCAGATACTGCCTCTATCAGTCGACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR CAA 90 bp TTAAAAAGGCCTGAGTTAAAAGTTCCACTCTGGGACTTGTATCAGATTACTCTCAGGGCCGGGAGTTGGTaGTGGTTGCGGGGAACACTG +
Preference number: 5 (lower is better)
Translates to: LKRPELKVPLWDLYQITLRAGSW*WLRGTL
Trigger: CAGTGTTCCCCGCAACCACAACCAACTCCCGGCCCT...GAGAGTAATCTGATACAAGTCCCAGAGTGGAACTTTTAACTCAGGCCTTTTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR CAA 90 bp GCAGATCCCTCTTCCAATTTCAGTATTTGCAAGGTCGGTGATTTTGTTTGTTTAAGGGCCGGGAGTTGGTaGTGGTTGCGGGGAACACTG +
Preference number: 5 (lower is better)
Translates to: ADPSSNFSICKVGDFVCLRAGSW*WLRGTL
Trigger: CAGTGTTCCCCGCAACCACAACCAACTCCCGGCCCT...TAAACAAACAAAATCACCGACCTTGCAAATACTGAAATTGGAAGAGGGATCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR CAA 90 bp GCAGATCCCTCTTCCAATTTCAGTATTTGCAAGGTCGGTGATTTTGTTTGTTTAAGCAAGGGCCGGGAGTaGGTTGTGGTTGCGGGGAAC +
Preference number: 5 (lower is better)
Translates to: ADPSSNFSICKVGDFVCLSKGRE*VVVAGN
Trigger: GTTCCCCGCAACCACAACCAACTCCCGGCCCTTGCT...TAAACAAACAAAATCACCGACCTTGCAAATACTGAAATTGGAAGAGGGATCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR CAA 90 bp ATACTTGGGAGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCGACATTCACGGCCAGTaGTCCACTGAACGAATTCAC +
Preference number: 5 (lower is better)
Translates to: ILGRYNFNQHPALADPSSDIHGQ*STERIH
Trigger: GTGAATTCGTTCAGTGGACAACTGGCCGTGAATGTC...GGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR CAA 90 bp AATGTGAGGCCAGGGCAATGTTATGCAATCCAGTCATCCAGAAGCTGTATTTTTCGCCCAAATTGGACATaGCGGCAGAGCCGTATCCGT +
Preference number: 5 (lower is better)
Translates to: NVRPGQCYAIQSSRSCIFRPNWT*RQSRIR
Trigger: ACGGATACGGCTCTGCCGCAATGTCCAATTTGGGCG...AAAAATACAGCTTCTGGATGACTGGATTGCATAACATTGCCCTGGCCTCACATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR CAA 90 bp TTAAAAAGGCCTGAGTTAAAAGTTCCACTCTGGGACTTGTATCAGATTACTCTCTGCAGGCTGTTCCCGTaGGTGCTGGTGCAGGTGGGA +
Preference number: 5 (lower is better)
Translates to: LKRPELKVPLWDLYQITLCRLFP*VLVQVG
Trigger: TCCCACCTGCACCAGCACCAACGGGAACAGCCTGCA...GAGAGTAATCTGATACAAGTCCCAGAGTGGAACTTTTAACTCAGGCCTTTTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR CAA 90 bp AGAATAAATATATCCCCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTGTGCAGGCTGTTCCCGTaGGTGCTGGTGCAGGTGGGA +
Preference number: 5 (lower is better)
Translates to: RINISPKYLGGTTLTNTLCRLFP*VLVQVG
Trigger: TCCCACCTGCACCAGCACCAACGGGAACAGCCTGCA...CAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGGGGATATATTTATTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR CAA 90 bp ATACTTGGGAGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCACCAACACCCTGCACTaGCAGATCCCTCTTCCAATT +
Preference number: 5 (lower is better)
Translates to: ILGRYNFNQHPALADPSSTNTLH*QIPLPI
Trigger: AATTGGAAGAGGGATCTGCAAGTGCAGGGTGTTGGT...GGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR CAA 90 bp CCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTACCAACACCCTGCACTaGCAGATCCCTCTTCCAATT +
Preference number: 5 (lower is better)
Translates to: PKYLGGTTLTNTLHLQIPTNTLH*QIPLPI
Trigger: AATTGGAAGAGGGATCTGCAAGTGCAGGGTGTTGGT...AGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR CAA 90 bp GGTTTTGGCTTGTTAACTGGAGGGCAGAGTGTGGAATTCTGTGCCTGGACCCTGATATCCCCCAAATACTaGGGAGGTACAACTTTAACC +
Preference number: 5 (lower is better)
Translates to: GFGLLTGGQSVEFCAWTLISPKY*GGTTLT
Trigger: GGTTAAAGTTGTACCTCCCAAGTATTTGGGGGATAT...CAGGGTCCAGGCACAGAATTCCACACTCTGCCCTCCAGTTAACAAGCCAAAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR CAA 90 bp ATACTTGGGAGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCTTCTGGGTTCTTGTCTaGGCCTTCATACACTATGGC +
Preference number: 5 (lower is better)
Translates to: ILGRYNFNQHPALADPSSFWVLV*AFIHYG
Trigger: GCCATAGTGTATGAAGGCCAAGACAAGAACCCAGAA...GGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
CDS-3UTR CAA 90 bp ATACTTGGGAGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCAGATCCGCAGCCCTTTaGAGTATTACTTCCTTTGGC +
Preference number: 5 (lower is better)
Translates to: ILGRYNFNQHPALADPSSRSAAL*SITSFG
Trigger: GCCAAAGGAAGTAATACTCAAAAGGGCTGCGGATCT...GGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR CAA 90 bp GGGTCGACTGATAGAGGCAGTATCTGGAATGGGAAAATCGAAAATACCTGCCACTTGGTCTTTTCGCTGTaGGCTTCTTTTTCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: GSTDRGSIWNGKIENTCHLVFSL*ASFSFS
Trigger: GGAGAAGGAAAAAGAAGCCAACAGCGAAAAGACCAA...GTGGCAGGTATTTTCGATTTTCCCATTCCAGATACTGCCTCTATCAGTCGACCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000313708.11
CDS-3UTR CAA 90 bp CTTGGGAGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCAATCACATTTCTGGGTTCTaGTCTTGGCCTTCATACACT +
Preference number: 5 (lower is better)
Translates to: LGRYNFNQHPALADPSSNHISGF*SWPSYT
Trigger: AGTGTATGAAGGCCAAGACAAGAACCCAGAAATGTG...ATTGGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
CDS-3UTR CAA 90 bp TTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCAATTTCAGTATTTGCAAGCTCGGGCTGATGGCTTaGATACAGGGAGTAGCATGT +
Preference number: 5 (lower is better)
Translates to: FNQHPALADPSSNFSICKLGLMA*IQGVAC
Trigger: ACATGCTACTCCCTGTATCAAAGCCATCAGCCCGAG...CTTGCAAATACTGAAATTGGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR CAA 90 bp ATACTTGGGAGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCATGATTTCCTGGTTGTaGTGTGGCATCCCATACAGT +
Preference number: 5 (lower is better)
Translates to: ILGRYNFNQHPALADPSSMISWL*CGIPYS
Trigger: ACTGTATGGGATGCCACACAACAACCAGGAAATCAT...GGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR CAA 90 bp CAGAATAAATATATCCCCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTGGGAGTTGGTTGTGGTaGCGGGGAACACTGTACAGG +
Preference number: 5 (lower is better)
Translates to: QNKYIPQILGRYNFNQHPGSWLW*RGTLYR
Trigger: CCTGTACAGTGTTCCCCGCAACCACAACCAACTCCC...AGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGGGGATATATTTATTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR CAA 90 bp AGAATAAATATATCCCCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTGGGGAGTTGGTTGTGGTaGCGGGGAACACTGTACAGG +
Preference number: 5 (lower is better)
Translates to: RINISPKYLGGTTLTNTLGSWLW*RGTLYR
Trigger: CCTGTACAGTGTTCCCCGCAACCACAACCAACTCCC...CAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGGGGATATATTTATTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR CAA 90 bp CTCTTAAAAAGGCCTGAGTTAAAAGTTCCACTCTGGGACTTGTATCAGATTACTGGGAGTTGGTTGTGGTaGCGGGGAACACTGTACAGG +
Preference number: 5 (lower is better)
Translates to: LLKRPELKVPLWDLYQITGSWLW*RGTLYR
Trigger: CCTGTACAGTGTTCCCCGCAACCACAACCAACTCCC...AGTAATCTGATACAAGTCCCAGAGTGGAACTTTTAACTCAGGCCTTTTTAAGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR CAA 90 bp GCAGATCCCTCTTCCAATTTCAGTATTTGCAAGGTCGGTGATTTTGTTTGTTTAGGGAGTTGGTTGTGGTaGCGGGGAACACTGTACAGG +
Preference number: 5 (lower is better)
Translates to: ADPSSNFSICKVGDFVCLGSWLW*RGTLYR
Trigger: CCTGTACAGTGTTCCCCGCAACCACAACCAACTCCC...TAAACAAACAAAATCACCGACCTTGCAAATACTGAAATTGGAAGAGGGATCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR CAA 90 bp CAGAATAAATATATCCCCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTCGCCCAAATTGGACATaGCGGCAGAGCCGTATCCGT +
Preference number: 5 (lower is better)
Translates to: QNKYIPQILGRYNFNQHPRPNWT*RQSRIR
Trigger: ACGGATACGGCTCTGCCGCAATGTCCAATTTGGGCG...AGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGGGGATATATTTATTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000622875.4
CDS-3UTR CAA 90 bp CCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTGTTCCACTCTGGGACTaGTATCAGATTACTCTCTGT +
Preference number: 5 (lower is better)
Translates to: PKYLGGTTLTNTLHLQIPVPLWD*YQITLC
Trigger: ACAGAGAGTAATCTGATACAAGTCCCAGAGTGGAAC...AGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR CAA 90 bp AGAATAAATATATCCCCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTGGCTGCTTCCACTCCGTaGGATGCTTTCCTGAATCCC +
Preference number: 5 (lower is better)
Translates to: RINISPKYLGGTTLTNTLAASTP*DAFLNP
Trigger: GGGATTCAGGAAAGCATCCAACGGAGTGGAAGCAGC...CAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGGGGATATATTTATTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
CDS-3UTR CAA 90 bp CAGAATAAATATATCCCCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTGCTGCTTCCACTCCGTaGGATGCTTTCCTGAATCCC +
Preference number: 5 (lower is better)
Translates to: QNKYIPQILGRYNFNQHPAASTP*DAFLNP
Trigger: GGGATTCAGGAAAGCATCCAACGGAGTGGAAGCAGC...AGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGGGGATATATTTATTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
CDS-3UTR CAA 90 bp AGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCAATTTCAGTTTCTGGGTTCTTGTCTaGGCCTTCATACACTATGGC +
Preference number: 5 (lower is better)
Translates to: RYNFNQHPALADPSSNFSFWVLV*AFIHYG
Trigger: GCCATAGTGTATGAAGGCCAAGACAAGAACCCAGAA...ACTGAAATTGGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
CDS-3UTR CAA 90 bp CAGGCAAATGCATCCTCAGAGCTTTGCTGCATCTTTGCTATTAATTCTTATTTTCGCCCAAATTGGACATaGCGGCAGAGCCGTATCCGT +
Preference number: 5 (lower is better)
Translates to: QANASSELCCIFAINSYFRPNWT*RQSRIR
Trigger: ACGGATACGGCTCTGCCGCAATGTCCAATTTGGGCG...AAAATAAGAATTAATAGCAAAGATGCAGCAAAGCTCTGAGGATGCATTTGCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR CAA 90 bp TTAAAAAGGCCTGAGTTAAAAGTTCCACTCTGGGACTTGTATCAGATTACTCTCCATGCCAGATATCGCTaGCAGGCTGTTCCCGTTGGT +
Preference number: 5 (lower is better)
Translates to: LKRPELKVPLWDLYQITLHARYR*QAVPVG
Trigger: ACCAACGGGAACAGCCTGCAAGCGATATCTGGCATG...GAGAGTAATCTGATACAAGTCCCAGAGTGGAACTTTTAACTCAGGCCTTTTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR CAA 90 bp ATACTTGGGAGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCATATCCCCCAAATACTaGGGAGGTACAACTTTAACC +
Preference number: 5 (lower is better)
Translates to: ILGRYNFNQHPALADPSSISPKY*GGTTLT
Trigger: GGTTAAAGTTGTACCTCCCAAGTATTTGGGGGATAT...GGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR CAA 90 bp GGGTCGACTGATAGAGGCAGTATCTGGAATGGGAAAATCGAAAATACCTGCCACAGCAATGCGTCCACCTaGCTTACATTTTCCAGTTTT +
Preference number: 5 (lower is better)
Translates to: GSTDRGSIWNGKIENTCHSNAST*LTFSSF
Trigger: AAAACTGGAAAATGTAAGCAAGGTGGACGCATTGCT...GTGGCAGGTATTTTCGATTTTCCCATTCCAGATACTGCCTCTATCAGTCGACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR CAA 90 bp CAGAATAAATATATCCCCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTCTCGGGCTGATGGCTTaGATACAGGGAGTAGCTTCC +
Preference number: 5 (lower is better)
Translates to: QNKYIPQILGRYNFNQHPLGLMA*IQGVAS
Trigger: GGAAGCTACTCCCTGTATCAAAGCCATCAGCCCGAG...AGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGGGGATATATTTATTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000380654.8
ENST00000517373.1
CDS-3UTR CAA 90 bp TTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCAATTTCAGTATTTGCAAGATGTATGCTTGGCTGTaGGGGGTTGTTTGGTTGGTT +
Preference number: 5 (lower is better)
Translates to: FNQHPALADPSSNFSICKMYAWL*GVVWLV
Trigger: AACCAACCAAACAACCCCCAACAGCCAAGCATACAT...CTTGCAAATACTGAAATTGGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000313708.11
CDS-3UTR CAA 90 bp AGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCAATTTCAGTGTTCCACTCTGGGACTaGTATCAGATTACTCTCTGT +
Preference number: 5 (lower is better)
Translates to: RYNFNQHPALADPSSNFSVPLWD*YQITLC
Trigger: ACAGAGAGTAATCTGATACAAGTCCCAGAGTGGAAC...ACTGAAATTGGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR CAA 90 bp CTCTCTGTAGCAGAATCCAACCTCTTCATTAATACAATTCTTCAAGGCAATTCTCTCGGGCTGATGGCTTaGATACAGGGAGTAGCTTCC +
Preference number: 5 (lower is better)
Translates to: LSVAESNLFINTILQGNSLGLMA*IQGVAS
Trigger: GGAAGCTACTCCCTGTATCAAAGCCATCAGCCCGAG...AGAATTGCCTTGAAGAATTGTATTAATGAAGAGGTTGGATTCTGCTACAGAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380654.8
ENST00000517373.1
CDS-3UTR CAA 90 bp TTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCAATTTCAGTATTTGCAAGTTGGTCTTTTCGCTGTaGGCTTCTTTTTCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: FNQHPALADPSSNFSICKLVFSL*ASFSFS
Trigger: GGAGAAGGAAAAAGAAGCCAACAGCGAAAAGACCAA...CTTGCAAATACTGAAATTGGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
CDS-3UTR CAA 90 bp CTTGGGAGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCAATTTCATACACTATGGCTaGTTTTGTCATGGAGTCAAT +
Preference number: 5 (lower is better)
Translates to: LGRYNFNQHPALADPSSNFIHYG*FCHGVN
Trigger: ATTGACTCCATGACAAAACAAGCCATAGTGTATGAA...ATTGGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
CDS-3UTR CAA 90 bp ATACTTGGGAGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCTTCATACACTATGGCTaGTTTTGTCATGGAGTCAAT +
Preference number: 5 (lower is better)
Translates to: ILGRYNFNQHPALADPSSFIHYG*FCHGVN
Trigger: ATTGACTCCATGACAAAACAAGCCATAGTGTATGAA...GGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
CDS-3UTR CAA 90 bp AGAATAAATATATCCCCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTGGCCCTCCGCCCATGCTaGGAATTATTATGGACAAAC +
Preference number: 5 (lower is better)
Translates to: RINISPKYLGGTTLTNTLALRPC*ELLWTN
Trigger: GTTTGTCCATAATAATTCCAAGCATGGGCGGAGGGC...CAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGGGGATATATTTATTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR CAA 90 bp GCAGATCCCTCTTCCAATTTCAGTATTTGCAAGGTCGGTGATTTTGTTTGTTTAGCCCTCCGCCCATGCTaGGAATTATTATGGACAAAC +
Preference number: 5 (lower is better)
Translates to: ADPSSNFSICKVGDFVCLALRPC*ELLWTN
Trigger: GTTTGTCCATAATAATTCCAAGCATGGGCGGAGGGC...TAAACAAACAAAATCACCGACCTTGCAAATACTGAAATTGGAAGAGGGATCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR CAA 90 bp CAGGCAAATGCATCCTCAGAGCTTTGCTGCATCTTTGCTATTAATTCTTATTTTCTCGGGCTGATGGCTTaGATACAGGGAGTAGCATGT +
Preference number: 5 (lower is better)
Translates to: QANASSELCCIFAINSYFLGLMA*IQGVAC
Trigger: ACATGCTACTCCCTGTATCAAAGCCATCAGCCCGAG...AAAATAAGAATTAATAGCAAAGATGCAGCAAAGCTCTGAGGATGCATTTGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR CAA 90 bp TTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCAATTTCAGTATTTGCAAGATGATTTCCTGGTTGTaGTGTGGCATCCCATACAGT +
Preference number: 5 (lower is better)
Translates to: FNQHPALADPSSNFSICKMISWL*CGIPYS
Trigger: ACTGTATGGGATGCCACACAACAACCAGGAAATCAT...CTTGCAAATACTGAAATTGGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR CAA 90 bp AATAAATATATCCCCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTGCAGACATTCACGGCCAGTaGTCCACTGAACGAATTCAC +
Preference number: 5 (lower is better)
Translates to: NKYIPQILGRYNFNQHPADIHGQ*STERIH
Trigger: GTGAATTCGTTCAGTGGACAACTGGCCGTGAATGTC...TGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGGGGATATATTTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR CAA 90 bp TTAAAAAGGCCTGAGTTAAAAGTTCCACTCTGGGACTTGTATCAGATTACTCTCACCAACACCCTGCACTaGCAGATCCCTCTTCCAATT +
Preference number: 5 (lower is better)
Translates to: LKRPELKVPLWDLYQITLTNTLH*QIPLPI
Trigger: AATTGGAAGAGGGATCTGCAAGTGCAGGGTGTTGGT...GAGAGTAATCTGATACAAGTCCCAGAGTGGAACTTTTAACTCAGGCCTTTTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR CAA 90 bp ATACTTGGGAGGTACAACTTTAACCAACACCCTGCACTTGCAGATCCCTCTTCCAAAACAGCATTAGGGTaGTTTTGTAAGCTTCCAAAG +
Preference number: 5 (lower is better)
Translates to: ILGRYNFNQHPALADPSSKTALG*FCKLPK
Trigger: CTTTGGAAGCTTACAAAACAACCCTAATGCTGTTTT...GGAAGAGGGATCTGCAAGTGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR CAA 90 bp AATAAATATATCCCCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTGCATTCTGGGTTCTTGTCTaGGCCTTCATACACTATGGC +
Preference number: 5 (lower is better)
Translates to: NKYIPQILGRYNFNQHPAFWVLV*AFIHYG
Trigger: GCCATAGTGTATGAAGGCCAAGACAAGAACCCAGAA...TGCAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGGGGATATATTTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
CDS-3UTR CAA 90 bp AGAATAAATATATCCCCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTGAGATCCGCAGCCCTTTaGAGTATTACTTCCTTTGGC +
Preference number: 5 (lower is better)
Translates to: RINISPKYLGGTTLTNTLRSAAL*SITSFG
Trigger: GCCAAAGGAAGTAATACTCAAAAGGGCTGCGGATCT...CAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGGGGATATATTTATTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR CAA 90 bp CAGAATAAATATATCCCCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTAGATCCGCAGCCCTTTaGAGTATTACTTCCTTTGGC +
Preference number: 5 (lower is better)
Translates to: QNKYIPQILGRYNFNQHPRSAAL*SITSFG
Trigger: GCCAAAGGAAGTAATACTCAAAAGGGCTGCGGATCT...AGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGGGGATATATTTATTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR CAA 90 bp CAGGCAAATGCATCCTCAGAGCTTTGCTGCATCTTTGCTATTAATTCTTATTTTGACATTCACGGCCAGTaGTCCACTGAACGAATTCAC +
Preference number: 5 (lower is better)
Translates to: QANASSELCCIFAINSYFDIHGQ*STERIH
Trigger: GTGAATTCGTTCAGTGGACAACTGGCCGTGAATGTC...AAAATAAGAATTAATAGCAAAGATGCAGCAAAGCTCTGAGGATGCATTTGCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR CAA 90 bp AGAATAAATATATCCCCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTGATTAGAGATGTATGCTaGGCTGTTGGGGGTTGTTTG +
Preference number: 5 (lower is better)
Translates to: RINISPKYLGGTTLTNTLIRDVC*AVGGCL
Trigger: CAAACAACCCCCAACAGCCAAGCATACATCTCTAAT...CAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGGGGATATATTTATTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000313708.11
CDS-3UTR CAA 90 bp GCAGATCCCTCTTCCAATTTCAGTATTTGCAAGGTCGGTGATTTTGTTTGTTTATTGGTCTTTTCGCTGTaGGCTTCTTTTTCCTTCTCC +
Preference number: 5 (lower is better)
Translates to: ADPSSNFSICKVGDFVCLLVFSL*ASFSFS
Trigger: GGAGAAGGAAAAAGAAGCCAACAGCGAAAAGACCAA...TAAACAAACAAAATCACCGACCTTGCAAATACTGAAATTGGAAGAGGGATCTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
CDS-3UTR CAA 90 bp CAGAATAAATATATCCCCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTCACATTTCTGGGTTCTaGTCTTGGCCTTCATACACT +
Preference number: 5 (lower is better)
Translates to: QNKYIPQILGRYNFNQHPHISGF*SWPSYT
Trigger: AGTGTATGAAGGCCAAGACAAGAACCCAGAAATGTG...AGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGGGGATATATTTATTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
CDS-3UTR CAA 90 bp CTCTTAAAAAGGCCTGAGTTAAAAGTTCCACTCTGGGACTTGTATCAGATTACTCACATTTCTGGGTTCTaGTCTTGGCCTTCATACACT +
Preference number: 5 (lower is better)
Translates to: LLKRPELKVPLWDLYQITHISGF*SWPSYT
Trigger: AGTGTATGAAGGCCAAGACAAGAACCCAGAAATGTG...AGTAATCTGATACAAGTCCCAGAGTGGAACTTTTAACTCAGGCCTTTTTAAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
CDS-3UTR CAA 90 bp CTCTCTGTAGCAGAATCCAACCTCTTCATTAATACAATTCTTCAAGGCAATTCTAGATCCGCAGCCCTTTaGAGTATTACTTCCTTTGGC +
Preference number: 5 (lower is better)
Translates to: LSVAESNLFINTILQGNSRSAAL*SITSFG
Trigger: GCCAAAGGAAGTAATACTCAAAAGGGCTGCGGATCT...AGAATTGCCTTGAAGAATTGTATTAATGAAGAGGTTGGATTCTGCTACAGAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR CAA 90 bp TTAAAAAGGCCTGAGTTAAAAGTTCCACTCTGGGACTTGTATCAGATTACTCTCATGATTTCCTGGTTGTaGTGTGGCATCCCATACAGT +
Preference number: 5 (lower is better)
Translates to: LKRPELKVPLWDLYQITLMISWL*CGIPYS
Trigger: ACTGTATGGGATGCCACACAACAACCAGGAAATCAT...GAGAGTAATCTGATACAAGTCCCAGAGTGGAACTTTTAACTCAGGCCTTTTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR CAA 90 bp AGAATAAATATATCCCCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTGATGATTTCCTGGTTGTaGTGTGGCATCCCATACAGT +
Preference number: 5 (lower is better)
Translates to: RINISPKYLGGTTLTNTLMISWL*CGIPYS
Trigger: ACTGTATGGGATGCCACACAACAACCAGGAAATCAT...CAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGGGGATATATTTATTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR CAA 90 bp AGAATAAATATATCCCCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTGAGAATGATTTCCTGGTaGTTGTGTGGCATCCCATAC +
Preference number: 5 (lower is better)
Translates to: RINISPKYLGGTTLTNTLRMISW*LCGIPY
Trigger: GTATGGGATGCCACACAACAACCAGGAAATCATTCT...CAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGGGGATATATTTATTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS CCA 90 bp CCTGTGTCTTCTCCAATCATTGTAAGTCCAGTAAGTGTTTACAGATaGCAAATGTTTAGTACCAAAAGTTCAGAAGACACCCAAACCAAC +
Preference number: 5 (lower is better)
Translates to: PVSSPIIVSPVSVYR*QMFSTKSSEDTQTN
Trigger: GTTGGTTTGGGTGTCTTCTGAACTTTTGGTACTAAACATTTGCCATCTGTAAACACTTACTGGACTTACAATGATTGGAGAAGACACAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523464.1
CDS-3UTR CAA 90 bp CTCTCTGTAGCAGAATCCAACCTCTTCATTAATACAATTCTTCAAGGCAATTCTAGAATGATTTCCTGGTaGTTGTGTGGCATCCCATAC +
Preference number: 5 (lower is better)
Translates to: LSVAESNLFINTILQGNSRMISW*LCGIPY
Trigger: GTATGGGATGCCACACAACAACCAGGAAATCATTCT...AGAATTGCCTTGAAGAATTGTATTAATGAAGAGGTTGGATTCTGCTACAGAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR CAA 90 bp CTCTCTGTAGCAGAATCCAACCTCTTCATTAATACAATTCTTCAAGGCAATTCTGTTCCACTCTGGGACTaGTATCAGATTACTCTCTGT +
Preference number: 5 (lower is better)
Translates to: LSVAESNLFINTILQGNSVPLWD*YQITLC
Trigger: ACAGAGAGTAATCTGATACAAGTCCCAGAGTGGAAC...AGAATTGCCTTGAAGAATTGTATTAATGAAGAGGTTGGATTCTGCTACAGAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR CAA 90 bp CAGAATAAATATATCCCCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTATATCCCCCAAATACTaGGGAGGTACAACTTTAACC +
Preference number: 5 (lower is better)
Translates to: QNKYIPQILGRYNFNQHPISPKY*GGTTLT
Trigger: GGTTAAAGTTGTACCTCCCAAGTATTTGGGGGATAT...AGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGGGGATATATTTATTCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR CAA 90 bp AGAATAAATATATCCCCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTGATATCCCCCAAATACTaGGGAGGTACAACTTTAACC +
Preference number: 5 (lower is better)
Translates to: RINISPKYLGGTTLTNTLISPKY*GGTTLT
Trigger: GGTTAAAGTTGTACCTCCCAAGTATTTGGGGGATAT...CAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGGGGATATATTTATTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000622875.4
CDS-3UTR CAA 90 bp CTCTTAAAAAGGCCTGAGTTAAAAGTTCCACTCTGGGACTTGTATCAGATTACTTTCATACACTATGGCTaGTTTTGTCATGGAGTCAAT +
Preference number: 5 (lower is better)
Translates to: LLKRPELKVPLWDLYQITFIHYG*FCHGVN
Trigger: ATTGACTCCATGACAAAACAAGCCATAGTGTATGAA...AGTAATCTGATACAAGTCCCAGAGTGGAACTTTTAACTCAGGCCTTTTTAAGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
CDS-3UTR CAA 90 bp AGAATAAATATATCCCCCAAATACTTGGGAGGTACAACTTTAACCAACACCCTGAAAACAGCATTAGGGTaGTTTTGTAAGCTTCCAAAG +
Preference number: 5 (lower is better)
Translates to: RINISPKYLGGTTLTNTLKTALG*FCKLPK
Trigger: CTTTGGAAGCTTACAAAACAACCCTAATGCTGTTTT...CAGGGTGTTGGTTAAAGTTGTACCTCCCAAGTATTTGGGGGATATATTTATTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR CAA 90 bp TCACTTACATCGCGTTTTAACTTTCCAGGCTGCATTTATTTACACAGTTGCTTAAAATATGGCTTTAACTaGTGTACATCTTCAGGCCAG +
Preference number: 5 (lower is better)
Translates to: SLTSRFNFPGCIYLHSCLKYGFN*CTSSGQ
Trigger: CTGGCCTGAAGATGTACACAAGTTAAAGCCATATTT...TAAGCAACTGTGTAAATAAATGCAGCCTGGAAAGTTAAAACGCGATGTAAGTGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS-3UTR CAA 90 bp CAGGCAAATGCATCCTCAGAGCTTTGCTGCATCTTTGCTATTAATTCTTATTTTAAATATGGCTTTAACTaGTGTACATCTTCAGGCCAG +
Preference number: 5 (lower is better)
Translates to: QANASSELCCIFAINSYFKYGFN*CTSSGQ
Trigger: CTGGCCTGAAGATGTACACAAGTTAAAGCCATATTT...AAAATAAGAATTAATAGCAAAGATGCAGCAAAGCTCTGAGGATGCATTTGCCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000313708.11
ENST00000622875.4
CDS CAA 90 bp GAGTTGGCAGCTGAGCCGTTGAGGAAGGTGGGGGAGCCGCCCAAATaGGACATTGCGGCAGAGCCGTATCCGTTCATGCTCGTGGTGACG +
Preference number: 6 (lower is better)
Translates to: ELAAEPLRKVGEPPK*DIAAEPYPFMLVVT
Trigger: CGTCACCACGAGCATGAACGGATACGGCTCTGCCGCAATGTCCAATTTGGGCGGCTCCCCCACCTTCCTCAACGGCTCAGCTGCCAACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000518836.5
ENST00000519739.5
ENST00000519890.5
ENST00000522192.5
ENST00000622875.4
CDS TCA 72 bp GCTGGATGGCACTATGGCATAGGGGGAGTTGGCAGCTaGGCCGTTGAGGAAGGTGGGGGAGCCGCCCAAATT +
Preference number: 6 (lower is better)
Translates to: AGWHYGIGGVGS*AVEEGGGAAQI
Trigger: AATTTGGGCGGCTCCCCCACCTTCCTCAACGGCTCAGCTGCCAACTCCCCCTATGCCATAGTGCCATCCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000518836.5
ENST00000519739.5
ENST00000519890.5
ENST00000522192.5
ENST00000622875.4
CDS TCA 72 bp GGCAGCCACGGTAGCAGCAGAAATTGTGGCCAATTGTaGTCCCTCCTCCGCCCCCTGTTCCTGACTGCTCCC +
Preference number: 6 (lower is better)
Translates to: GSHGSSRNCGQL*SLLRPLFLTAP
Trigger: GGGAGCAGTCAGGAACAGGGGGCGGAGGAGGGATCACAATTGGCCACAATTTCTGCTGCTACCGTGGCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000522192.5
CDS CCA 72 bp TCTCACGTCTCAGCTAGCAGGGCAGGTGGGAATGGATaGAAAACATGCTCGGCGTCTCGCCGCAGCAGCCAC +
Preference number: 6 (lower is better)
Translates to: SHVSASRAGGNG*KTCSASRRSSH
Trigger: GTGGCTGCTGCGGCGAGACGCCGAGCATGTTTTCCATCCATTCCCACCTGCCCTGCTAGCTGAGACGTGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523315.1
CDS CAA 72 bp GCTGAGCCGTTGAGGAAGGTGGGGGAGCCGCCCAAATaGGACATTGCGGCAGAGCCGTATCCGTTCATGCTC +
Preference number: 6 (lower is better)
Translates to: AEPLRKVGEPPK*DIAAEPYPFML
Trigger: GAGCATGAACGGATACGGCTCTGCCGCAATGTCCAATTTGGGCGGCTCCCCCACCTTCCTCAACGGCTCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000518836.5
ENST00000519739.5
ENST00000519890.5
ENST00000522192.5
ENST00000622875.4
CDS TCA 72 bp GCACTATGGCATAGGGGGAGTTGGCAGCTGAGCCGTTaGGGAAGGTGGGGGAGCCGCCCAAATTGGACATTG +
Preference number: 6 (lower is better)
Translates to: ALWHRGSWQLSR*GRWGSRPNWTL
Trigger: CAATGTCCAATTTGGGCGGCTCCCCCACCTTCCTCAACGGCTCAGCTGCCAACTCCCCCTATGCCATAGTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000518836.5
ENST00000519739.5
ENST00000519890.5
ENST00000522192.5
ENST00000622875.4
CDS GCA 72 bp GTTGAGGAAGGTGGGGGAGCCGCCCAAATTGGACATTaGGGCAGAGCCGTATCCGTTCATGCTCGTGGTGAC +
Preference number: 6 (lower is better)
Translates to: VEEGGGAAQIGH*GRAVSVHARGD
Trigger: GTCACCACGAGCATGAACGGATACGGCTCTGCCGCAATGTCCAATTTGGGCGGCTCCCCCACCTTCCTCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000518836.5
ENST00000519739.5
ENST00000519890.5
ENST00000522192.5
ENST00000622875.4
CDS TCA 72 bp GTGATGCCTCGGAGACATTCACGGCCAGTTGTCCACTaGACGAATTCACGCCCATCATCCCTGCGTGGACCG +
Preference number: 6 (lower is better)
Translates to: VMPRRHSRPVVH*TNSRPSSLRGP
Trigger: CGGTCCACGCAGGGATGATGGGCGTGAATTCGTTCAGTGGACAACTGGCCGTGAATGTCTCCGAGGCATCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000518836.5
ENST00000519739.5
ENST00000519890.5
ENST00000522192.5
ENST00000622875.4
CDS GCA 72 bp CAGTTGTCCACTGAACGAATTCACGCCCATCATCCCTaGGTGGACCGAGGTGTTAGCAAGGGCCGGGAGTTG +
Preference number: 6 (lower is better)
Translates to: QLSTERIHAHHP*VDRGVSKGREL
Trigger: CAACTCCCGGCCCTTGCTAACACCTCGGTCCACGCAGGGATGATGGGCGTGAATTCGTTCAGTGGACAACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000518836.5
ENST00000519739.5
ENST00000519890.5
ENST00000522192.5
ENST00000622875.4
CDS CCA 72 bp TGTCCACTGAACGAATTCACGCCCATCATCCCTGCGTaGACCGAGGTGTTAGCAAGGGCCGGGAGTTGGTTG +
Preference number: 6 (lower is better)
Translates to: CPLNEFTPIIPA*TEVLARAGSWL
Trigger: CAACCAACTCCCGGCCCTTGCTAACACCTCGGTCCACGCAGGGATGATGGGCGTGAATTCGTTCAGTGGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000518836.5
ENST00000519739.5
ENST00000519890.5
ENST00000522192.5
ENST00000622875.4
CDS TCA 72 bp CGCAAAGACACAAGAGATGCAGGAGAGAGGTCTGCGTaGGCGAGTGGACCAACTTTCGAGGCAACTTTCCCC +
Preference number: 6 (lower is better)
Translates to: RKDTRDAGERSA*ASGPTFEATFP
Trigger: GGGGAAAGTTGCCTCGAAAGTTGGTCCACTCGCTCACGCAGACCTCTCTCCTGCATCTCTTGTGTCTTTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522192.5
CDS GCA 72 bp TTCCTGGGTTGCATCAGGACGCAAAGACACAAGAGATaGAGGAGAGAGGTCTGCGTGAGCGAGTGGACCAAC +
Preference number: 6 (lower is better)
Translates to: FLGCIRTQRHKR*RREVCVSEWTN
Trigger: GTTGGTCCACTCGCTCACGCAGACCTCTCTCCTGCATCTCTTGTGTCTTTGCGTCCTGATGCAACCCAGGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522192.5
CDS GCA 72 bp TATCGTTCAGGAGAAGGCCAGTCCCGGGAGAGACCCTaGACTGGAGAACTTGCTAGAGTCCACAAAAGACTG +
Preference number: 6 (lower is better)
Translates to: YRSGEGQSRERP*TGELARVHKRL
Trigger: CAGTCTTTTGTGGACTCTAGCAAGTTCTCCAGTGCAGGGTCTCTCCCGGGACTGGCCTTCTCCTGAACGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000518323.1
CDS TCA 72 bp TTGGCAAACGCTCAGGGTCACCAGGGTGCCGAGGAATaGCCTTCTGTAACCTCTGGAAACCATAATCGATGG +
Preference number: 6 (lower is better)
Translates to: LANAQGHQGAEE*PSVTSGNHNRW
Trigger: CCATCGATTATGGTTTCCAGAGGTTACAGAAGGTCATTCCTCGGCACCCTGGTGACCCTGAGCGTTTGCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000518836.5
ENST00000519739.5
ENST00000519890.5
ENST00000522192.5
ENST00000523464.1
ENST00000622875.4
CDS CAA 72 bp ATGTTATCAGAGACTGCCAGGACATGGCCATCCACATaGACTGTCGTAGACACCACGACCTGGAATCTCCGC +
Preference number: 6 (lower is better)
Translates to: MLSETARTWPST*TVVDTTTWNLR
Trigger: GCGGAGATTCCAGGTCGTGGTGTCTACGACAGTCAATGTGGATGGCCATGTCCTGGCAGTCTCTGATAACAT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000518836.5
ENST00000519739.5
ENST00000519890.5
ENST00000522192.5
ENST00000523464.1
ENST00000622875.4
CDS CCA 72 bp ACCTCCTCCGCAAAGACTATAAGCCGCCCCGGATCTTaGAGCTGTCCTATATTCCCTTTGCTACAAACATGC +
Preference number: 6 (lower is better)
Translates to: TSSAKTISRPGS*SCPIFPLLQTC
Trigger: GCATGTTTGTAGCAAAGGGAATATAGGACAGCTCCAAGATCCGGGGCGGCTTATAGTCTTTGCGGAGGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523464.1
CDS CAA 90 bp GGTAGTGAATTCCGTTATTGGTCTTTTCGCTGTTGGCTTCCTGGGTaGCATCAGGACGCAAAGACACAAGAGATGCAGGAGAGAGGTCTG +
Preference number: 6 (lower is better)
Translates to: GSEFRYWSFRCWLPG*HQDAKTQEMQERGL
Trigger: CAGACCTCTCTCCTGCATCTCTTGTGTCTTTGCGTCCTGATGCAACCCAGGAAGCCAACAGCGAAAAGACCAATAACGGAATTCACTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522192.5
CDS TCA 72 bp TCCCATACAGTGCTTCTACCAGATCCGCAGCCCTTTTaGGTATTACTTCCTTTGGCAAACGCTCAGGGTCAC +
Preference number: 6 (lower is better)
Translates to: SHTVLLPDPQPF*VLLPLANAQGH
Trigger: GTGACCCTGAGCGTTTGCCAAAGGAAGTAATACTCAAAAGGGCTGCGGATCTGGTAGAAGCACTGTATGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000518836.5
ENST00000519739.5
ENST00000519890.5
ENST00000522192.5
ENST00000622875.4
CDS CCA 72 bp GCCGGTAGTGAATTCCGTTATTGGTCTTTTCGCTGTTaGCTTCCTGGGTTGCATCAGGACGCAAAGACACAA +
Preference number: 6 (lower is better)
Translates to: AGSEFRYWSFRC*LPGLHQDAKTQ
Trigger: TTGTGTCTTTGCGTCCTGATGCAACCCAGGAAGCCAACAGCGAAAAGACCAATAACGGAATTCACTACCGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522192.5
CDS CAA 72 bp AACCTCCTCCGCAAAGACTATAAGCCGCCCCGGATCTaGGAGCTGTCCTATATTCCCTTTGCTACAAACATG +
Preference number: 6 (lower is better)
Translates to: NLLRKDYKPPRI*ELSYIPFATNM
Trigger: CATGTTTGTAGCAAAGGGAATATAGGACAGCTCCAAGATCCGGGGCGGCTTATAGTCTTTGCGGAGGAGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523464.1
CDS CAA 72 bp TTCCGTTATTGGTCTTTTCGCTGTTGGCTTCCTGGGTaGCATCAGGACGCAAAGACACAAGAGATGCAGGAG +
Preference number: 6 (lower is better)
Translates to: FRYWSFRCWLPG*HQDAKTQEMQE
Trigger: CTCCTGCATCTCTTGTGTCTTTGCGTCCTGATGCAACCCAGGAAGCCAACAGCGAAAAGACCAATAACGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522192.5
CDS CAA 90 bp TTCAAGAAGAACCTCCTCCGCAAAGACTATAAGCCGCCCCGGATCTaGGAGCTGTCCTATATTCCCTTTGCTACAAACATGCCTGTGTCT +
Preference number: 6 (lower is better)
Translates to: FKKNLLRKDYKPPRI*ELSYIPFATNMPVS
Trigger: AGACACAGGCATGTTTGTAGCAAAGGGAATATAGGACAGCTCCAAGATCCGGGGCGGCTTATAGTCTTTGCGGAGGAGGTTCTTCTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523464.1
CDS CCA 72 bp GGCAATCAACGGATCCCTGGGACAGATAATTCTATTTaGGTCACCTATGGGTTAATGGCCAGGCTTAACCTC +
Preference number: 6 (lower is better)
Translates to: GNQRIPGTDNSI*VTYGLMARLNL
Trigger: GAGGTTAAGCCTGGCCATTAACCCATAGGTGACCCAAATAGAATTATCTGTCCCAGGGATCCGTTGATTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519890.5
CDS CAA 72 bp ATCCCATACAGTGCTTCTACCAGATCCGCAGCCCTTTaGAGTATTACTTCCTTTGGCAAACGCTCAGGGTCA +
Preference number: 6 (lower is better)
Translates to: IPYSASTRSAAL*SITSFGKRSGS
Trigger: TGACCCTGAGCGTTTGCCAAAGGAAGTAATACTCAAAAGGGCTGCGGATCTGGTAGAAGCACTGTATGGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000518836.5
ENST00000519739.5
ENST00000519890.5
ENST00000522192.5
ENST00000622875.4
CDS TCA 72 bp CTTCATACACTATGGCTTGTTTTGTCATGGAGTCAATaGGGCGCACGTAGAAATCCTGCTCCGTCCTTATCC +
Preference number: 6 (lower is better)
Translates to: LHTLWLVLSWSQ*GARRNPAPSLS
Trigger: GGATAAGGACGGAGCAGGATTTCTACGTGCGCCTCATTGACTCCATGACAAAACAAGCCATAGTGTATGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000518836.5
ENST00000519739.5
ENST00000522192.5
ENST00000523315.1
CDS CCA 72 bp TGTAGAGAAGCTGAAGCCGGTAGTGAATTCCGTTATTaGTCTTTTCGCTGTTGGCTTCTTTTTCCTTCTCCA +
Preference number: 6 (lower is better)
Translates to: CREAEAGSEFRY*SFRCWLLFPSP
Trigger: TGGAGAAGGAAAAAGAAGCCAACAGCGAAAAGACCAATAACGGAATTCACTACCGGCTTCAGCTTCTCTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000313708.11
ENST00000380654.8
ENST00000517373.1
ENST00000518836.5
ENST00000523315.1