RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for EAF2 (Homo sapiens)

Ensembl gene IDs: ENSG00000145088

Ensembl transcript IDs: ENST00000273668.7, ENST00000451944.2, ENST00000465664.1, ENST00000490434.5, ENST00000490477.1

Found 71 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGCATCTATATCAGGAATCCTGTACTGTGTCATGGTAGGATGTCCTaGGACACAATTCCCTGTATCAGAAGTAGAGGATTTGCAATCTTC +
Preference number: 1 (lower is better)
Translates to: GIYIRNPVLCHGRMS*DTIPCIRSRGFAIF
Trigger: GAAGATTGCAAATCCTCTACTTCTGATACAGGGAATTGTGTCTCAGGACATCCTACCATGACACAGTACAGGATTCCTGATATAGATGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490434.5
3UTR CCA 90 bp AGCTTCTGCCTTCAGTTCTCTTTCGATATCATCTATTGGAGATGCTaGGGACATCTTATCTTCAGATGGAGAATGTTTTACAAGATTGGG +
Preference number: 1 (lower is better)
Translates to: SFCLQFSFDIIYWRC*GHLIFRWRMFYKIG
Trigger: CCCAATCTTGTAAAACATTCTCCATCTGAAGATAAGATGTCCCCAGCATCTCCAATAGATGATATCGAAAGAGAACTGAAGGCAGAAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490434.5
3UTR TCA 90 bp CTTAAAGTATTCATCAGAAGGCCACTGTTGTCTCGAAATCTATTATaGCTGGCATCTATATCAGGAATCCTGTACTGTGTCATGGTAGGA +
Preference number: 1 (lower is better)
Translates to: LKVFIRRPLLSRNLL*LASISGILYCVMVG
Trigger: TCCTACCATGACACAGTACAGGATTCCTGATATAGATGCCAGTCATAATAGATTTCGAGACAACAGTGGCCTTCTGATGAATACTTTAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490434.5
3UTR GCA 90 bp ACTAGCTTCTGCCTTCAGTTCTCTTTCGATATCATCTATTGGAGATaGTGGGGACATCTTATCTTCAGATGGAGAATGTTTTACAAGATT +
Preference number: 1 (lower is better)
Translates to: TSFCLQFSFDIIYWR*WGHLIFRWRMFYKI
Trigger: AATCTTGTAAAACATTCTCCATCTGAAGATAAGATGTCCCCAGCATCTCCAATAGATGATATCGAAAGAGAACTGAAGGCAGAAGCTAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490434.5
3UTR CCA 90 bp GATGATGAACTTTTGGAATCTGATGAACTATCACAACTACTCATCTaGTCCATTAGACTAGCTTCTGCCTTCAGTTCTCTTTCGATATCA +
Preference number: 1 (lower is better)
Translates to: DDELLESDELSQLLI*SIRLASAFSSLSIS
Trigger: TGATATCGAAAGAGAACTGAAGGCAGAAGCTAGTCTAATGGACCAGATGAGTAGTTGTGATAGTTCATCAGATTCCAAAAGTTCATCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490434.5
3UTR-3UTR TCA 90 bp CTGGTGGAGTTGAACCTTCTATATTTGGCAGAGTTATGGTCACCTGTTCACCTTATTGGGAGTCCTGGCTaGATTCCACATTTGTTGTTG +
Preference number: 2 (lower is better)
Translates to: LVELNLLYLAELWSPVHLIGSPG*IPHLLL
Trigger: CAACAACAAATGTGGAATTCAGCCAGGACTCCCAAT...AAGGTGAACAGGTGACCATAACTCTGCCAAATATAGAAGGTTCAACTCCACCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490477.1
3UTR-3UTR TCA 90 bp CAGTTCTCTTTCGATATCATCTATTGGAGATGCTGGGGACATCTTATCTTCAGAATTGGGAGTCCTGGCTaGATTCCACATTTGTTGTTG +
Preference number: 2 (lower is better)
Translates to: QFSFDIIYWRCWGHLIFRIGSPG*IPHLLL
Trigger: CAACAACAAATGTGGAATTCAGCCAGGACTCCCAAT...TCTGAAGATAAGATGTCCCCAGCATCTCCAATAGATGATATCGAAAGAGAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490434.5
3UTR-3UTR GCA 90 bp ATCCTGTACTGTGTCATGGTAGGATGTCCTGAGACACAATTCCCTGTATCAGAAATCATCTATTGGAGATaGTGGGGACATCTTATCTTC +
Preference number: 2 (lower is better)
Translates to: ILYCVMVGCPETQFPVSEIIYWR*WGHLIF
Trigger: GAAGATAAGATGTCCCCAGCATCTCCAATAGATGAT...TTCTGATACAGGGAATTGTGTCTCAGGACATCCTACCATGACACAGTACAGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490434.5
3UTR CAA 90 bp GTAGGATGTCCTGAGACACAATTCCCTGTATCAGAAGTAGAGGATTaGCAATCTTCATCTTCTGAGTCACTAGAACTATCCTCACTACTT +
Preference number: 2 (lower is better)
Translates to: VGCPETQFPVSEVED*QSSSSESLELSSLL
Trigger: AAGTAGTGAGGATAGTTCTAGTGACTCAGAAGATGAAGATTGCAAATCCTCTACTTCTGATACAGGGAATTGTGTCTCAGGACATCCTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490434.5
3UTR-3UTR CCA 90 bp CAGATGGAGAATGTTTTACAAGATTGGGAGTCCTGGCTGAATTCCACATTTGTTCAAGATTGGGAGTCCTaGCTGAATTCCACATTTGTT +
Preference number: 2 (lower is better)
Translates to: QMENVLQDWESWLNSTFVQDWES*LNSTFV
Trigger: AACAAATGTGGAATTCAGCCAGGACTCCCAATCTTG...AACAAATGTGGAATTCAGCCAGGACTCCCAATCTTGTAAAACATTCTCCATCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490434.5
ENST00000490477.1
3UTR-3UTR CCA 90 bp GGATGTCCTGAGACACAATTCCCTGTATCAGAAGTAGAGGATTTGCAATCTTCATTCGATATCATCTATTaGAGATGCTGGGGACATCTT +
Preference number: 2 (lower is better)
Translates to: GCPETQFPVSEVEDLQSSFDIIY*RCWGHL
Trigger: AAGATGTCCCCAGCATCTCCAATAGATGATATCGAA...TGAAGATTGCAAATCCTCTACTTCTGATACAGGGAATTGTGTCTCAGGACATCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490434.5
3UTR-3UTR CCA 90 bp TCTCTTTCGATATCATCTATTGGAGATGCTGGGGACATCTTATCTTCAGATGGAAATGTTTTACAAGATTaGGAGTCCTGGCTGAATTCC +
Preference number: 2 (lower is better)
Translates to: SLSISSIGDAGDILSSDGNVLQD*ESWLNS
Trigger: GGAATTCAGCCAGGACTCCCAATCTTGTAAAACATT...TCCATCTGAAGATAAGATGTCCCCAGCATCTCCAATAGATGATATCGAAAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490434.5
3UTR-3UTR CCA 90 bp GAGGATTTGCAATCTTCATCTTCTGAGTCACTAGAACTATCCTCACTACTTGAAATCTATTGGAGATGCTaGGGACATCTTATCTTCAGA +
Preference number: 2 (lower is better)
Translates to: EDLQSSSSESLELSSLLEIYWRC*GHLIFR
Trigger: TCTGAAGATAAGATGTCCCCAGCATCTCCAATAGAT...TTCAAGTAGTGAGGATAGTTCTAGTGACTCAGAAGATGAAGATTGCAAATCCTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490434.5
3UTR CAA 90 bp TCTGAGTCACTAGAACTATCCTCACTACTTGAAGATGATGAACTTTaGGAATCTGATGAACTATCACAACTACTCATCTGGTCCATTAGA +
Preference number: 2 (lower is better)
Translates to: SESLELSSLLEDDEL*ESDELSQLLIWSIR
Trigger: TCTAATGGACCAGATGAGTAGTTGTGATAGTTCATCAGATTCCAAAAGTTCATCATCTTCAAGTAGTGAGGATAGTTCTAGTGACTCAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490434.5
3UTR-3UTR CCA 90 bp ATGATGAACTTTTGGAATCTGATGAACTATCACAACTACTCATCTGGTCCATTACAAGATTGGGAGTCCTaGCTGAATTCCACATTTGTT +
Preference number: 2 (lower is better)
Translates to: MMNFWNLMNYHNYSSGPLQDWES*LNSTFV
Trigger: AACAAATGTGGAATTCAGCCAGGACTCCCAATCTTG...TAATGGACCAGATGAGTAGTTGTGATAGTTCATCAGATTCCAAAAGTTCATCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490434.5
3UTR CCA 72 bp CTGGTGGAGTTGAACCTTCTATATTTGGCAGAGTTATaGTCACCTGTTCACCTTCACCAACCTCAAGGTATC +
Preference number: 3 (lower is better)
Translates to: LVELNLLYLAEL*SPVHLHQPQGI
Trigger: GATACCTTGAGGTTGGTGAAGGTGAACAGGTGACCATAACTCTGCCAAATATAGAAGGTTCAACTCCACCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490477.1
3UTR-3UTR CAA 90 bp CTGTACTGTGTCATGGTAGGATGTCCTGAGACACAATTCCCTGTATCAGAAGTATTTCGATATCATCTATaGGAGATGCTGGGGACATCT +
Preference number: 3 (lower is better)
Translates to: LYCVMVGCPETQFPVSEVFRYHL*EMLGTS
Trigger: AGATGTCCCCAGCATCTCCAATAGATGATATCGAAA...TACTTCTGATACAGGGAATTGTGTCTCAGGACATCCTACCATGACACAGTACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490434.5
3UTR-3UTR CAA 90 bp CTGGTGGAGTTGAACCTTCTATATTTGGCAGAGTTATGGTCACCTGTTCACCTTTTTCGATATCATCTATaGGAGATGCTGGGGACATCT +
Preference number: 3 (lower is better)
Translates to: LVELNLLYLAELWSPVHLFRYHL*EMLGTS
Trigger: AGATGTCCCCAGCATCTCCAATAGATGATATCGAAA...AAGGTGAACAGGTGACCATAACTCTGCCAAATATAGAAGGTTCAACTCCACCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490477.1
3UTR TCA 72 bp ATCAGGAATCCTGTACTGTGTCATGGTAGGATGTCCTaGGACACAATTCCCTGTATCAGAAGTAGAGGATTT +
Preference number: 3 (lower is better)
Translates to: IRNPVLCHGRMS*DTIPCIRSRGF
Trigger: AAATCCTCTACTTCTGATACAGGGAATTGTGTCTCAGGACATCCTACCATGACACAGTACAGGATTCCTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490434.5
3UTR CCA 72 bp AGCTTCTGCCTTCAGTTCTCTTTCGATATCATCTATTaGAGATGCTGGGGACATCTTATCTTCAGATGGAGA +
Preference number: 3 (lower is better)
Translates to: SFCLQFSFDIIY*RCWGHLIFRWR
Trigger: TCTCCATCTGAAGATAAGATGTCCCCAGCATCTCCAATAGATGATATCGAAAGAGAACTGAAGGCAGAAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490434.5
3UTR-3UTR CAA 90 bp TTCTATATTTGGCAGAGTTATGGTCACCTGTTCACCTTCACCAACCTCAAGGTAGAATGTTTTACAAGATaGGGAGTCCTGGCTGAATTC +
Preference number: 3 (lower is better)
Translates to: FYIWQSYGHLFTFTNLKVECFTR*GVLAEF
Trigger: GAATTCAGCCAGGACTCCCAATCTTGTAAAACATTC...TACCTTGAGGTTGGTGAAGGTGAACAGGTGACCATAACTCTGCCAAATATAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490477.1
3UTR TCA 72 bp TTCATCAGAAGGCCACTGTTGTCTCGAAATCTATTATaGCTGGCATCTATATCAGGAATCCTGTACTGTGTC +
Preference number: 3 (lower is better)
Translates to: FIRRPLLSRNLL*LASISGILYCV
Trigger: GACACAGTACAGGATTCCTGATATAGATGCCAGTCATAATAGATTTCGAGACAACAGTGGCCTTCTGATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490434.5
3UTR-3UTR CAA 90 bp CAGATGGAGAATGTTTTACAAGATTGGGAGTCCTGGCTGAATTCCACATTTGTTTCAATAGAAGCAGGTTaGAAGTCATCTGAGAAGGAA +
Preference number: 3 (lower is better)
Translates to: QMENVLQDWESWLNSTFVSIEAG*KSSEKE
Trigger: TTCCTTCTCAGATGACTTCAAACCTGCTTCTATTGA...AACAAATGTGGAATTCAGCCAGGACTCCCAATCTTGTAAAACATTCTCCATCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490477.1
3UTR CCA 72 bp CTTTTGGAATCTGATGAACTATCACAACTACTCATCTaGTCCATTAGACTAGCTTCTGCCTTCAGTTCTCTT +
Preference number: 3 (lower is better)
Translates to: LLESDELSQLLI*SIRLASAFSSL
Trigger: AAGAGAACTGAAGGCAGAAGCTAGTCTAATGGACCAGATGAGTAGTTGTGATAGTTCATCAGATTCCAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490434.5
3UTR-3UTR CAA 90 bp ATGATGAACTTTTGGAATCTGATGAACTATCACAACTACTCATCTGGTCCATTAGAATGTTTTACAAGATaGGGAGTCCTGGCTGAATTC +
Preference number: 3 (lower is better)
Translates to: MMNFWNLMNYHNYSSGPLECFTR*GVLAEF
Trigger: GAATTCAGCCAGGACTCCCAATCTTGTAAAACATTC...TAATGGACCAGATGAGTAGTTGTGATAGTTCATCAGATTCCAAAAGTTCATCAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490434.5
CDS-3UTR GCA 90 bp GGAATCCTGTACTGTGTCATGGTAGGATGTCCTGAGACACAATTCCCTGTATCACCAGCGCTCACTATCTaGCACCTCAGCCTGAAGCAG +
Preference number: 4 (lower is better)
Translates to: GILYCVMVGCPETQFPVSPALTI*HLSLKQ
Trigger: CTGCTTCAGGCTGAGGTGGCAGATAGTGAGCGCTGG...TGATACAGGGAATTGTGTCTCAGGACATCCTACCATGACACAGTACAGGATTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490434.5
CDS-3UTR GCA 90 bp GCATCTATATCAGGAATCCTGTACTGTGTCATGGTAGGATGTCCTGAGACACAAAAGGCGCAGCGCGGCTaGTTCTCGAAACTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: ASISGILYCVMVGCPETQKAQRG*FSKLSP
Trigger: AGGGGAGAGTTTCGAGAAGCAGCCGCGCTGCGCCTT...TTGTGTCTCAGGACATCCTACCATGACACAGTACAGGATTCCTGATATAGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490434.5
CDS-3UTR GCA 90 bp TATCTTCAGATGGAGAATGTTTTACAAGATTGGGAGTCCTGGCTGAATTCCACAAAGGCGCAGCGCGGCTaGTTCTCGAAACTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: YLQMENVLQDWESWLNSTKAQRG*FSKLSP
Trigger: AGGGGAGAGTTTCGAGAAGCAGCCGCGCTGCGCCTT...TGTGGAATTCAGCCAGGACTCCCAATCTTGTAAAACATTCTCCATCTGAAGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000490434.5
ENST00000490477.1
CDS-3UTR CCA 90 bp GGAGTTGAACCTTCTATATTTGGCAGAGTTATGGTCACCTGTTCACCTTCACCAAGCACCATCTCATCGTaGGGAGCTAGCGCACAGTGT +
Preference number: 4 (lower is better)
Translates to: GVEPSIFGRVMVTCSPSPSTISS*GASAQC
Trigger: ACACTGTGCGCTAGCTCCCCACGATGAGATGGTGCT...TGGTGAAGGTGAACAGGTGACCATAACTCTGCCAAATATAGAAGGTTCAACTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490477.1
CDS-3UTR TCA 90 bp CAGATGGAGAATGTTTTACAAGATTGGGAGTCCTGGCTGAATTCCACATTTGTTAACTCTCCCCTAACTTaGGAACCCGCTCGCGACGGT +
Preference number: 4 (lower is better)
Translates to: QMENVLQDWESWLNSTFVNSPLT*EPARDG
Trigger: ACCGTCGCGAGCGGGTTCTCAAGTTAGGGGAGAGTT...AACAAATGTGGAATTCAGCCAGGACTCCCAATCTTGTAAAACATTCTCCATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000490434.5
ENST00000490477.1
CDS-3UTR TCA 90 bp GGAATCCTGTACTGTGTCATGGTAGGATGTCCTGAGACACAATTCCCTGTATCACATGGTAGGATGTCCTaGGACACAATTCCCTGTATC +
Preference number: 4 (lower is better)
Translates to: GILYCVMVGCPETQFPVSHGRMS*DTIPCI
Trigger: GATACAGGGAATTGTGTCTCAGGACATCCTACCATG...TGATACAGGGAATTGTGTCTCAGGACATCCTACCATGACACAGTACAGGATTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490434.5
CDS-3UTR TCA 90 bp TCACTAGAACTATCCTCACTACTTGAAGATGATGAACTTTTGGAATCTGATGAAAACTCTCCCCTAACTTaGGAACCCGCTCGCGACGGT +
Preference number: 4 (lower is better)
Translates to: SLELSSLLEDDELLESDENSPLT*EPARDG
Trigger: ACCGTCGCGAGCGGGTTCTCAAGTTAGGGGAGAGTT...TTCATCAGATTCCAAAAGTTCATCATCTTCAAGTAGTGAGGATAGTTCTAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000490434.5
CDS-3UTR TCA 90 bp TGGGGACATCTTATCTTCAGATGGAGAATGTTTTACAAGATTGGGAGTCCTGGCATTGGGAGTCCTGGCTaGATTCCACATTTGTTGTTG +
Preference number: 4 (lower is better)
Translates to: WGHLIFRWRMFYKIGSPGIGSPG*IPHLLL
Trigger: CAACAACAAATGTGGAATTCAGCCAGGACTCCCAAT...GCCAGGACTCCCAATCTTGTAAAACATTCTCCATCTGAAGATAAGATGTCCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000490434.5
ENST00000490477.1
CDS-3UTR CCA 90 bp CCTTCTATATTTGGCAGAGTTATGGTCACCTGTTCACCTTCACCAACCTCAAGGTTCGATATCATCTATTaGAGATGCTGGGGACATCTT +
Preference number: 4 (lower is better)
Translates to: PSIFGRVMVTCSPSPTSRFDIIY*RCWGHL
Trigger: AAGATGTCCCCAGCATCTCCAATAGATGATATCGAA...CCTTGAGGTTGGTGAAGGTGAACAGGTGACCATAACTCTGCCAAATATAGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490477.1
CDS-3UTR CCA 90 bp GCATGGAAAAACCAGATAAAGACGCATATCACACTTCCGGAAAATGGGACTGAATATTTGGCAGAGTTATaGTCACCTGTTCACCTTCAC +
Preference number: 4 (lower is better)
Translates to: AWKNQIKTHITLPENGTEYLAEL*SPVHLH
Trigger: GTGAAGGTGAACAGGTGACCATAACTCTGCCAAATA...TTCAGTCCCATTTTCCGGAAGTGTGATATGCGTCTTTATCTGGTTTTTCCATGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490477.1
CDS-3UTR CCA 90 bp CTGTACTGTGTCATGGTAGGATGTCCTGAGACACAATTCCCTGTATCAGAAGTAATCTATTGGAGATGCTaGGGACATCTTATCTTCAGA +
Preference number: 4 (lower is better)
Translates to: LYCVMVGCPETQFPVSEVIYWRC*GHLIFR
Trigger: TCTGAAGATAAGATGTCCCCAGCATCTCCAATAGAT...TACTTCTGATACAGGGAATTGTGTCTCAGGACATCCTACCATGACACAGTACAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490434.5
CDS-3UTR CCA 90 bp TGGGGACATCTTATCTTCAGATGGAGAATGTTTTACAAGATTGGGAGTCCTGGCTTCGATATCATCTATTaGAGATGCTGGGGACATCTT +
Preference number: 4 (lower is better)
Translates to: WGHLIFRWRMFYKIGSPGFDIIY*RCWGHL
Trigger: AAGATGTCCCCAGCATCTCCAATAGATGATATCGAA...GCCAGGACTCCCAATCTTGTAAAACATTCTCCATCTGAAGATAAGATGTCCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000490434.5
ENST00000490477.1
CDS-3UTR CCA 90 bp GCATCTATATCAGGAATCCTGTACTGTGTCATGGTAGGATGTCCTGAGACACAATCACAACTACTCATCTaGTCCATTAGACTAGCTTCT +
Preference number: 4 (lower is better)
Translates to: ASISGILYCVMVGCPETQSQLLI*SIRLAS
Trigger: AGAAGCTAGTCTAATGGACCAGATGAGTAGTTGTGA...TTGTGTCTCAGGACATCCTACCATGACACAGTACAGGATTCCTGATATAGATGC
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490434.5
3UTR CAA 72 bp CCTGAGACACAATTCCCTGTATCAGAAGTAGAGGATTaGCAATCTTCATCTTCTGAGTCACTAGAACTATCC +
Preference number: 4 (lower is better)
Translates to: PETQFPVSEVED*QSSSSESLELS
Trigger: GGATAGTTCTAGTGACTCAGAAGATGAAGATTGCAAATCCTCTACTTCTGATACAGGGAATTGTGTCTCAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490434.5
CDS-3UTR GCA 90 bp GCATGGAAAAACCAGATAAAGACGCATATCACACTTCCGGAAAATGGGACTGAAATCATCTATTGGAGATaGTGGGGACATCTTATCTTC +
Preference number: 4 (lower is better)
Translates to: AWKNQIKTHITLPENGTEIIYWR*WGHLIF
Trigger: GAAGATAAGATGTCCCCAGCATCTCCAATAGATGAT...TTCAGTCCCATTTTCCGGAAGTGTGATATGCGTCTTTATCTGGTTTTTCCATGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000490477.1
CDS-3UTR CCA 90 bp TCTCTTTCGATATCATCTATTGGAGATGCTGGGGACATCTTATCTTCAGATGGATATTTGGCAGAGTTATaGTCACCTGTTCACCTTCAC +
Preference number: 4 (lower is better)
Translates to: SLSISSIGDAGDILSSDGYLAEL*SPVHLH
Trigger: GTGAAGGTGAACAGGTGACCATAACTCTGCCAAATA...TCCATCTGAAGATAAGATGTCCCCAGCATCTCCAATAGATGATATCGAAAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490434.5
CDS-3UTR CCA 90 bp TATCTTCAGATGGAGAATGTTTTACAAGATTGGGAGTCCTGGCTGAATTCCACACAAGATTGGGAGTCCTaGCTGAATTCCACATTTGTT +
Preference number: 4 (lower is better)
Translates to: YLQMENVLQDWESWLNSTQDWES*LNSTFV
Trigger: AACAAATGTGGAATTCAGCCAGGACTCCCAATCTTG...TGTGGAATTCAGCCAGGACTCCCAATCTTGTAAAACATTCTCCATCTGAAGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490434.5
ENST00000490477.1
CDS-3UTR CCA 90 bp TCTTTCGATATCATCTATTGGAGATGCTGGGGACATCTTATCTTCAGATGGAGACAAGATTGGGAGTCCTaGCTGAATTCCACATTTGTT +
Preference number: 4 (lower is better)
Translates to: SFDIIYWRCWGHLIFRWRQDWES*LNSTFV
Trigger: AACAAATGTGGAATTCAGCCAGGACTCCCAATCTTG...TCTCCATCTGAAGATAAGATGTCCCCAGCATCTCCAATAGATGATATCGAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490434.5
ENST00000490477.1
CDS-3UTR TCA 90 bp AATGTTTTACAAGATTGGGAGTCCTGGCTGAATTCCACATTTGTTGTTGCTGTTGCAATCTTCATCTTCTaGGTCACTAGAACTATCCTC +
Preference number: 4 (lower is better)
Translates to: NVLQDWESWLNSTFVVAVAIFIF*VTRTIL
Trigger: GAGGATAGTTCTAGTGACTCAGAAGATGAAGATTGC...AACAGCAACAACAAATGTGGAATTCAGCCAGGACTCCCAATCTTGTAAAACATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490434.5
CDS-3UTR CCA 90 bp TATCTTCAGATGGAGAATGTTTTACAAGATTGGGAGTCCTGGCTGAATTCCACAAATGTTTTACAAGATTaGGAGTCCTGGCTGAATTCC +
Preference number: 4 (lower is better)
Translates to: YLQMENVLQDWESWLNSTNVLQD*ESWLNS
Trigger: GGAATTCAGCCAGGACTCCCAATCTTGTAAAACATT...TGTGGAATTCAGCCAGGACTCCCAATCTTGTAAAACATTCTCCATCTGAAGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000490434.5
ENST00000490477.1
CDS-3UTR CCA 90 bp TCTTTCGATATCATCTATTGGAGATGCTGGGGACATCTTATCTTCAGATGGAGAATCTATTGGAGATGCTaGGGACATCTTATCTTCAGA +
Preference number: 4 (lower is better)
Translates to: SFDIIYWRCWGHLIFRWRIYWRC*GHLIFR
Trigger: TCTGAAGATAAGATGTCCCCAGCATCTCCAATAGAT...TCTCCATCTGAAGATAAGATGTCCCCAGCATCTCCAATAGATGATATCGAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490434.5
ENST00000490477.1
CDS-3UTR CCA 90 bp CTGTACTGTGTCATGGTAGGATGTCCTGAGACACAATTCCCTGTATCAGAAGTAGAAATCTATTATGACTaGCATCTATATCAGGAATCC +
Preference number: 4 (lower is better)
Translates to: LYCVMVGCPETQFPVSEVEIYYD*HLYQES
Trigger: GGATTCCTGATATAGATGCCAGTCATAATAGATTTC...TACTTCTGATACAGGGAATTGTGTCTCAGGACATCCTACCATGACACAGTACAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490434.5
3UTR CAA 72 bp GACATCTTATCTTCAGATGGAGAATGTTTTACAAGATaGGGAGTCCTGGCTGAATTCCACATTTGTTGTTGC +
Preference number: 4 (lower is better)
Translates to: DILSSDGECFTR*GVLAEFHICCC
Trigger: GCAACAACAAATGTGGAATTCAGCCAGGACTCCCAATCTTGTAAAACATTCTCCATCTGAAGATAAGATGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000490434.5
ENST00000490477.1
CDS-3UTR TCA 90 bp ATGATGAACTTTTGGAATCTGATGAACTATCACAACTACTCATCTGGTCCATTAATTGGGAGTCCTGGCTaGATTCCACATTTGTTGTTG +
Preference number: 4 (lower is better)
Translates to: MMNFWNLMNYHNYSSGPLIGSPG*IPHLLL
Trigger: CAACAACAAATGTGGAATTCAGCCAGGACTCCCAAT...TAATGGACCAGATGAGTAGTTGTGATAGTTCATCAGATTCCAAAAGTTCATCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490434.5
CDS-3UTR TCA 90 bp ATGATGAACTTTTGGAATCTGATGAACTATCACAACTACTCATCTGGTCCATTAATCACTGTCACTTCCTaGTTCACTCAGCTGCAAATC +
Preference number: 4 (lower is better)
Translates to: MMNFWNLMNYHNYSSGPLITVTS*FTQLQI
Trigger: GATTTGCAGCTGAGTGAATCAGGAAGTGACAGTGAT...TAATGGACCAGATGAGTAGTTGTGATAGTTCATCAGATTCCAAAAGTTCATCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490434.5
CDS-3UTR TCA 90 bp AATGTTTTACAAGATTGGGAGTCCTGGCTGAATTCCACATTTGTTGTTGCTGTTTCTCGAAATCTATTATaGCTGGCATCTATATCAGGA +
Preference number: 4 (lower is better)
Translates to: NVLQDWESWLNSTFVVAVSRNLL*LASISG
Trigger: TCCTGATATAGATGCCAGTCATAATAGATTTCGAGA...AACAGCAACAACAAATGTGGAATTCAGCCAGGACTCCCAATCTTGTAAAACATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490434.5
3UTR CAA 72 bp CTAGAACTATCCTCACTACTTGAAGATGATGAACTTTaGGAATCTGATGAACTATCACAACTACTCATCTGG +
Preference number: 4 (lower is better)
Translates to: LELSSLLEDDEL*ESDELSQLLIW
Trigger: CCAGATGAGTAGTTGTGATAGTTCATCAGATTCCAAAAGTTCATCATCTTCAAGTAGTGAGGATAGTTCTAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490434.5
CDS-3UTR GCA 90 bp ATGATGAACTTTTGGAATCTGATGAACTATCACAACTACTCATCTGGTCCATTAATCATCTATTGGAGATaGTGGGGACATCTTATCTTC +
Preference number: 4 (lower is better)
Translates to: MMNFWNLMNYHNYSSGPLIIYWR*WGHLIF
Trigger: GAAGATAAGATGTCCCCAGCATCTCCAATAGATGAT...TAATGGACCAGATGAGTAGTTGTGATAGTTCATCAGATTCCAAAAGTTCATCAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490434.5
CDS TCA 90 bp TGTGGAAGGCGCAGCGCGGCTGCTTCTCGAAACTCTCCCCTAACTTaGGAACCCGCTCGCGACGGTCTAGGTGTGAGAATCCCGCTGCGC +
Preference number: 5 (lower is better)
Translates to: CGRRSAAASRNSPLT*EPARDGLGVRIPLR
Trigger: GCGCAGCGGGATTCTCACACCTAGACCGTCGCGAGCGGGTTCTCAAGTTAGGGGAGAGTTTCGAGAAGCAGCCGCGCTGCGCCTTCCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273668.7
ENST00000451944.2
ENST00000465664.1
ENST00000490434.5
ENST00000490477.1
CDS-3UTR CAA 90 bp ATCCTGTACTGTGTCATGGTAGGATGTCCTGAGACACAATTCCCTGTATCAGAAAAACTCTCCCCTAACTaGAGAACCCGCTCGCGACGG +
Preference number: 5 (lower is better)
Translates to: ILYCVMVGCPETQFPVSEKLSPN*RTRSRR
Trigger: CCGTCGCGAGCGGGTTCTCAAGTTAGGGGAGAGTTT...TTCTGATACAGGGAATTGTGTCTCAGGACATCCTACCATGACACAGTACAGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000490434.5
CDS-3UTR CAA 90 bp CAGATGGAGAATGTTTTACAAGATTGGGAGTCCTGGCTGAATTCCACATTTGTTAAACTCTCCCCTAACTaGAGAACCCGCTCGCGACGG +
Preference number: 5 (lower is better)
Translates to: QMENVLQDWESWLNSTFVKLSPN*RTRSRR
Trigger: CCGTCGCGAGCGGGTTCTCAAGTTAGGGGAGAGTTT...AACAAATGTGGAATTCAGCCAGGACTCCCAATCTTGTAAAACATTCTCCATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000490434.5
ENST00000490477.1
CDS-3UTR CAA 90 bp CAGTTCTCTTTCGATATCATCTATTGGAGATGCTGGGGACATCTTATCTTCAGACTGAAGCAGCTGCACTaGATCCCGCCAGCCAAGTCA +
Preference number: 5 (lower is better)
Translates to: QFSFDIIYWRCWGHLIFRLKQLH*IPPAKS
Trigger: TGACTTGGCTGGCGGGATCAAGTGCAGCTGCTTCAG...TCTGAAGATAAGATGTCCCCAGCATCTCCAATAGATGATATCGAAAGAGAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490434.5
CDS-3UTR CAA 90 bp CCTTCTATATTTGGCAGAGTTATGGTCACCTGTTCACCTTCACCAACCTCAAGGTTTCGATATCATCTATaGGAGATGCTGGGGACATCT +
Preference number: 5 (lower is better)
Translates to: PSIFGRVMVTCSPSPTSRFRYHL*EMLGTS
Trigger: AGATGTCCCCAGCATCTCCAATAGATGATATCGAAA...CCTTGAGGTTGGTGAAGGTGAACAGGTGACCATAACTCTGCCAAATATAGAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490477.1
CDS-3UTR CAA 90 bp GGATGTCCTGAGACACAATTCCCTGTATCAGAAGTAGAGGATTTGCAATCTTCAAATTACTCTCCTGCTTaGACTTTAACTCCGCCACCA +
Preference number: 5 (lower is better)
Translates to: GCPETQFPVSEVEDLQSSNYSPA*TLTPPP
Trigger: TGGTGGCGGAGTTAAAGTCAAAGCAGGAGAGTAATT...TGAAGATTGCAAATCCTCTACTTCTGATACAGGGAATTGTGTCTCAGGACATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490434.5
CDS-3UTR CAA 90 bp CTGGTGGAGTTGAACCTTCTATATTTGGCAGAGTTATGGTCACCTGTTCACCTTTTGAACCTTCTATATTaGGCAGAGTTATGGTCACCT +
Preference number: 5 (lower is better)
Translates to: LVELNLLYLAELWSPVHLLNLLY*AELWSP
Trigger: AGGTGACCATAACTCTGCCAAATATAGAAGGTTCAA...AAGGTGAACAGGTGACCATAACTCTGCCAAATATAGAAGGTTCAACTCCACCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490477.1
CDS-3UTR CAA 90 bp TTCTATATTTGGCAGAGTTATGGTCACCTGTTCACCTTCACCAACCTCAAGGTACAGTTACTGGTGGAGTaGAACCTTCTATATTTGGCA +
Preference number: 5 (lower is better)
Translates to: FYIWQSYGHLFTFTNLKVQLLVE*NLLYLA
Trigger: TGCCAAATATAGAAGGTTCAACTCCACCAGTAACTG...TACCTTGAGGTTGGTGAAGGTGAACAGGTGACCATAACTCTGCCAAATATAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000490477.1
CDS-3UTR CAA 90 bp TGGGGACATCTTATCTTCAGATGGAGAATGTTTTACAAGATTGGGAGTCCTGGCTCAATAGAAGCAGGTTaGAAGTCATCTGAGAAGGAA +
Preference number: 5 (lower is better)
Translates to: WGHLIFRWRMFYKIGSPGSIEAG*KSSEKE
Trigger: TTCCTTCTCAGATGACTTCAAACCTGCTTCTATTGA...GCCAGGACTCCCAATCTTGTAAAACATTCTCCATCTGAAGATAAGATGTCCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490477.1
CDS-3UTR CAA 90 bp TCTCTTTCGATATCATCTATTGGAGATGCTGGGGACATCTTATCTTCAGATGGAGAATGTTTTACAAGATaGGGAGTCCTGGCTGAATTC +
Preference number: 5 (lower is better)
Translates to: SLSISSIGDAGDILSSDGECFTR*GVLAEF
Trigger: GAATTCAGCCAGGACTCCCAATCTTGTAAAACATTC...TCCATCTGAAGATAAGATGTCCCCAGCATCTCCAATAGATGATATCGAAAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490434.5
CDS-3UTR CAA 90 bp TCTCTTTCGATATCATCTATTGGAGATGCTGGGGACATCTTATCTTCAGATGGATCAGAAGTAGAGGATTaGCAATCTTCATCTTCTGAG +
Preference number: 5 (lower is better)
Translates to: SLSISSIGDAGDILSSDGSEVED*QSSSSE
Trigger: CTCAGAAGATGAAGATTGCAAATCCTCTACTTCTGA...TCCATCTGAAGATAAGATGTCCCCAGCATCTCCAATAGATGATATCGAAAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000490434.5
CDS TCA 90 bp TTTAAAGTATTCATCAGAAGGCCACTGTTGTCTCGAAATCTATTATaGCTGGCATCTATATCAGGAATCCTGTACTGTGTCATGGTAGGA +
Preference number: 5 (lower is better)
Translates to: FKVFIRRPLLSRNLL*LASISGILYCVMVG
Trigger: TCCTACCATGACACAGTACAGGATTCCTGATATAGATGCCAGTCATAATAGATTTCGAGACAACAGTGGCCTTCTGATGAATACTTTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000451944.2
CDS-3UTR CAA 90 bp ATGATGAACTTTTGGAATCTGATGAACTATCACAACTACTCATCTGGTCCATTAAACTATCCTCACTACTaGAAGATGATGAACTTTTGG +
Preference number: 5 (lower is better)
Translates to: MMNFWNLMNYHNYSSGPLNYPHY*KMMNFW
Trigger: CCAAAAGTTCATCATCTTCAAGTAGTGAGGATAGTT...TAATGGACCAGATGAGTAGTTGTGATAGTTCATCAGATTCCAAAAGTTCATCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000490434.5
CDS CAA 90 bp GTGTGGAAGGCGCAGCGCGGCTGCTTCTCGAAACTCTCCCCTAACTaGAGAACCCGCTCGCGACGGTCTAGGTGTGAGAATCCCGCTGCG +
Preference number: 6 (lower is better)
Translates to: VWKAQRGCFSKLSPN*RTRSRRSRCENPAA
Trigger: CGCAGCGGGATTCTCACACCTAGACCGTCGCGAGCGGGTTCTCAAGTTAGGGGAGAGTTTCGAGAAGCAGCCGCGCTGCGCCTTCCACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273668.7
ENST00000451944.2
ENST00000465664.1
ENST00000490434.5
ENST00000490477.1
CDS TCA 72 bp CGCAGCGCGGCTGCTTCTCGAAACTCTCCCCTAACTTaGGAACCCGCTCGCGACGGTCTAGGTGTGAGAATC +
Preference number: 6 (lower is better)
Translates to: RSAAASRNSPLT*EPARDGLGVRI
Trigger: GATTCTCACACCTAGACCGTCGCGAGCGGGTTCTCAAGTTAGGGGAGAGTTTCGAGAAGCAGCCGCGCTGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273668.7
ENST00000451944.2
ENST00000465664.1
ENST00000490434.5
ENST00000490477.1
CDS CAA 72 bp GCGCAGCGCGGCTGCTTCTCGAAACTCTCCCCTAACTaGAGAACCCGCTCGCGACGGTCTAGGTGTGAGAAT +
Preference number: 6 (lower is better)
Translates to: AQRGCFSKLSPN*RTRSRRSRCEN
Trigger: ATTCTCACACCTAGACCGTCGCGAGCGGGTTCTCAAGTTAGGGGAGAGTTTCGAGAAGCAGCCGCGCTGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000273668.7
ENST00000451944.2
ENST00000465664.1
ENST00000490434.5
ENST00000490477.1
CDS CAA 72 bp TATATAGGTGGTGGAGACCAGGATTCACATCCGGGTTaGCCTGAAGTCTTATATCAGACAGGCAGAATTGCT +
Preference number: 6 (lower is better)
Translates to: YIGGGDQDSHPG*PEVLYQTGRIA
Trigger: AGCAATTCTGCCTGTCTGATATAAGACTTCAGGCAAACCCGGATGTGAATCCTGGTCTCCACCACCTATATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465664.1
CDS CAA 90 bp CACATTATATATATAGGTGGTGGAGACCAGGATTCACATCCGGGTTaGCCTGAAGTCTTATATCAGACAGGCAGAATTGCTCCTGAGAAG +
Preference number: 6 (lower is better)
Translates to: HIIYIGGGDQDSHPG*PEVLYQTGRIAPEK
Trigger: CTTCTCAGGAGCAATTCTGCCTGTCTGATATAAGACTTCAGGCAAACCCGGATGTGAATCCTGGTCTCCACCACCTATATATATAATGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000465664.1