RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for E2F7 (Homo sapiens)

Ensembl gene IDs: ENSG00000165891

Ensembl transcript IDs: ENST00000322886.12, ENST00000416496.6, ENST00000547316.1, ENST00000550669.5, ENST00000551058.1, ENST00000551558.1, ENST00000552907.5

Found 414 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GATGGTTTGCATCCCGCCTCGGACATCCGGGACTCTCAGGGCGTTTaGTCCCACCCCCACCTGGCAAAGCGGCAGGTTAGTCAGCGCCGC +
Preference number: 1 (lower is better)
Translates to: DGLHPASDIRDSQGV*SHPHLAKRQVSQRR
Trigger: GCGGCGCTGACTAACCTGCCGCTTTGCCAGGTGGGGGTGGGATCAAACGCCCTGAGAGTCCCGGATGTCCGAGGCGGGATGCAAACCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416496.6
3UTR CCA 90 bp TCCCACCCCCACCTGGCAAAGCGGCAGGTTAGTCAGCGCCGCCGCTaGGGATTTCTAGTCTCCTCTGGGCCGAGCTGGTGTTTCGTGACT +
Preference number: 1 (lower is better)
Translates to: SHPHLAKRQVSQRRR*GFLVSSGPSWCFVT
Trigger: AGTCACGAAACACCAGCTCGGCCCAGAGGAGACTAGAAATCCCCAGCGGCGGCGCTGACTAACCTGCCGCTTTGCCAGGTGGGGGTGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416496.6
3UTR GCA 90 bp TGGATGAAAGAGAGAGGAAGGACCCGTGCTCAGGACGGGATGGTTTaGATCCCGCCTCGGACATCCGGGACTCTCAGGGCGTTTGATCCC +
Preference number: 1 (lower is better)
Translates to: WMKERGRTRAQDGMV*IPPRTSGTLRAFDP
Trigger: GGGATCAAACGCCCTGAGAGTCCCGGATGTCCGAGGCGGGATGCAAACCATCCCGTCCTGAGCACGGGTCCTTCCTCTCTCTTTCATCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
3UTR CCA 90 bp AGTCAGCGCCGCCGCTGGGGATTTCTAGTCTCCTCTGGGCCGAGCTaGTGTTTCGTGACTGGTTCCTTTCTCTTCTCTTCAGGACAGGGT +
Preference number: 1 (lower is better)
Translates to: SQRRRWGFLVSSGPS*CFVTGSFLFSSGQG
Trigger: ACCCTGTCCTGAAGAGAAGAGAAAGGAACCAGTCACGAAACACCAGCTCGGCCCAGAGGAGACTAGAAATCCCCAGCGGCGGCGCTGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416496.6
3UTR CCA 90 bp CTGGGGATTTCTAGTCTCCTCTGGGCCGAGCTGGTGTTTCGTGACTaGTTCCTTTCTCTTCTCTTCAGGACAGGGTCTCCAAGGCTGCCG +
Preference number: 1 (lower is better)
Translates to: LGISSLLWAELVFRD*FLSLLFRTGSPRLP
Trigger: CGGCAGCCTTGGAGACCCTGTCCTGAAGAGAAGAGAAAGGAACCAGTCACGAAACACCAGCTCGGCCCAGAGGAGACTAGAAATCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416496.6
3UTR CCA 90 bp TCAGGAAATCAGATGATTGATGGTGGTGGGAAGTTAACAGAAGTGTaGATGAAAGAGAGAGGAAGGACCCGTGCTCAGGACGGGATGGTT +
Preference number: 1 (lower is better)
Translates to: SGNQMIDGGGKLTEV*MKERGRTRAQDGMV
Trigger: AACCATCCCGTCCTGAGCACGGGTCCTTCCTCTCTCTTTCATCCACACTTCTGTTAACTTCCCACCACCATCAATCATCTGATTTCCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
3UTR CCA 90 bp GACCTCGCTCTTCTGTTACATGCACTTTCTTTATCAGAGCCAAGCTaGTCAGAACATTGGCTATGTCATAGAGGCGTCGTACCTTTGCTG +
Preference number: 1 (lower is better)
Translates to: DLALLLHALSLSEPS*SEHWLCHRGVVPLL
Trigger: CAGCAAAGGTACGACGCCTCTATGACATAGCCAATGTTCTGACCAGCTTGGCTCTGATAAAGAAAGTGCATGTAACAGAAGAGCGAGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552907.5
3UTR GCA 90 bp CATAACAGTTTCCAGAATTGTATTCATGCTAGAACAACCAACCCGTaGGCTCACCATTCTCATTTTTCAGAGGTACCAACTAACTACAGT +
Preference number: 1 (lower is better)
Translates to: HNSFQNCIHARTTNP*AHHSHFSEVPTNYS
Trigger: ACTGTAGTTAGTTGGTACCTCTGAAAAATGAGAATGGTGAGCGCACGGGTTGGTTGTTCTAGCATGAATACAATTCTGGAAACTGTTATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
3UTR GCA 90 bp TTGAATCAAAACCATAAGTCAGTCGGCGCTTTCACTGTGACACCATaGAGAGTCGGAACTCTAACTGGTATTAAATGCACAATTAATTAC +
Preference number: 1 (lower is better)
Translates to: LNQNHKSVGAFTVTP*RVGTLTGIKCTINY
Trigger: GTAATTAATTGTGCATTTAATACCAGTTAGAGTTCCGACTCTGCATGGTGTCACAGTGAAAGCGCCGACTGACTTATGGTTTTGATTCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
3UTR TCA 90 bp GCGCTCACCATTCTCATTTTTCAGAGGTACCAACTAACTACAGTTTaGATACCCTTGGATATGAAACATATGTCCATTTTCCCTCTTACT +
Preference number: 1 (lower is better)
Translates to: ALTILIFQRYQLTTV*IPLDMKHMSIFPLT
Trigger: AGTAAGAGGGAAAATGGACATATGTTTCATATCCAAGGGTATTCAAACTGTAGTTAGTTGGTACCTCTGAAAAATGAGAATGGTGAGCGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
3UTR TCA 90 bp ATATCCTCACCAATGGGACTGCTTCTTAACACCCCTCAGGAATTATaGATTCTGAGGTTAAATGGTCATATCATGATCAGAATAATAAAA +
Preference number: 1 (lower is better)
Translates to: ISSPMGLLLNTPQEL*ILRLNGHIMIRIIK
Trigger: TTTTATTATTCTGATCATGATATGACCATTTAACCTCAGAATTCATAATTCCTGAGGGGTGTTAAGAAGCAGTCCCATTGGTGAGGATAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
3UTR-3UTR CCA 90 bp CCGTGCTCAGGACGGGATGGTTTGCATCCCGCCTCGGACATCCGGGACTCTCAGCTGGTGTTTCGTGACTaGTTCCTTTCTCTTCTCTTC +
Preference number: 2 (lower is better)
Translates to: PCSGRDGLHPASDIRDSQLVFRD*FLSLLF
Trigger: GAAGAGAAGAGAAAGGAACCAGTCACGAAACACCAG...CTGAGAGTCCCGGATGTCCGAGGCGGGATGCAAACCATCCCGTCCTGAGCACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416496.6
3UTR-3UTR TCA 90 bp AGACGATTCTTGAATCAAAACCATAAGTCAGTCGGCGCTTTCACTGTGACACCAGACTCTCAGGGCGTTTaGTCCCACCCCCACCTGGCA +
Preference number: 2 (lower is better)
Translates to: RRFLNQNHKSVGAFTVTPDSQGV*SHPHLA
Trigger: TGCCAGGTGGGGGTGGGATCAAACGCCCTGAGAGTC...TGGTGTCACAGTGAAAGCGCCGACTGACTTATGGTTTTGATTCAAGAATCGTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
3UTR-3UTR GCA 90 bp CTTCACTACCCAAAATATCCAAGTCTAGCGCAGCAGCTTCAATTCCACCAGTTGCAGGACGGGATGGTTTaGATCCCGCCTCGGACATCC +
Preference number: 2 (lower is better)
Translates to: LHYPKYPSLAQQLQFHQLQDGMV*IPPRTS
Trigger: GGATGTCCGAGGCGGGATGCAAACCATCCCGTCCTG...CAACTGGTGGAATTGAAGCTGCTGCGCTAGACTTGGATATTTTGGGTAGTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
3UTR-3UTR CCA 90 bp TCAAGCCCACAGTCAGGGTTAGCACAGTTCATTTACAGCAAGGTGTGTCATTCAGATCCCACCCCCACCTaGCAAAGCGGCAGGTTAGTC +
Preference number: 2 (lower is better)
Translates to: SSPQSGLAQFIYSKVCHSDPTPT*QSGRLV
Trigger: GACTAACCTGCCGCTTTGCCAGGTGGGGGTGGGATC...TGAATGACACACCTTGCTGTAAATGAACTGTGCTAACCCTGACTGTGGGCTTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416496.6
3UTR-3UTR GCA 90 bp CTCAAGATTGCCATTGCTTCTTCACTACCCAAAATATCCAAGTCTAGCGCAGCACAGGACGGGATGGTTTaGATCCCGCCTCGGACATCC +
Preference number: 2 (lower is better)
Translates to: LKIAIASSLPKISKSSAAQDGMV*IPPRTS
Trigger: GGATGTCCGAGGCGGGATGCAAACCATCCCGTCCTG...TGCTGCGCTAGACTTGGATATTTTGGGTAGTGAAGAAGCAATGGCAATCTTGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
3UTR-3UTR GCA 90 bp AGACGATTCTTGAATCAAAACCATAAGTCAGTCGGCGCTTTCACTGTGACACCAGAGAGGAAGGACCCGTaGTCAGGACGGGATGGTTTG +
Preference number: 2 (lower is better)
Translates to: RRFLNQNHKSVGAFTVTPERKDP*SGRDGL
Trigger: CAAACCATCCCGTCCTGAGCACGGGTCCTTCCTCTC...TGGTGTCACAGTGAAAGCGCCGACTGACTTATGGTTTTGATTCAAGAATCGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
3UTR-3UTR TCA 90 bp AGACGATTCTTGAATCAAAACCATAAGTCAGTCGGCGCTTTCACTGTGACACCATCGGCGCTTTCACTGTaGCACCATGCAGAGTCGGAA +
Preference number: 2 (lower is better)
Translates to: RRFLNQNHKSVGAFTVTPSALSL*HHAESE
Trigger: TTCCGACTCTGCATGGTGTCACAGTGAAAGCGCCGA...TGGTGTCACAGTGAAAGCGCCGACTGACTTATGGTTTTGATTCAAGAATCGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
3UTR-3UTR TCA 90 bp TTTCACATCATTACTCTTCAGAATTCAACGAAAAGGTCTCATCCAGGTTCCAATGACTCTCAGGGCGTTTaGTCCCACCCCCACCTGGCA +
Preference number: 2 (lower is better)
Translates to: FHIITLQNSTKRSHPGSNDSQGV*SHPHLA
Trigger: TGCCAGGTGGGGGTGGGATCAAACGCCCTGAGAGTC...ATTGGAACCTGGATGAGACCTTTTCGTTGAATTCTGAAGAGTAATGATGTGAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
3UTR-3UTR TCA 90 bp ACAACCAACCCGTGCGCTCACCATTCTCATTTTTCAGAGGTACCAACTAACTACCGAGCTGGTGTTTCGTaGCTGGTTCCTTTCTCTTCT +
Preference number: 2 (lower is better)
Translates to: TTNPCAHHSHFSEVPTNYRAGVS*LVPFSS
Trigger: AGAAGAGAAAGGAACCAGTCACGAAACACCAGCTCG...GTAGTTAGTTGGTACCTCTGAAAAATGAGAATGGTGAGCGCACGGGTTGGTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416496.6
3UTR-3UTR GCA 90 bp AACAGTAATATCTCACTGTTCACACAGTTATTTGAGAAGCAGCAGTTAGGCTGCGAGAGGAAGGACCCGTaGTCAGGACGGGATGGTTTG +
Preference number: 2 (lower is better)
Translates to: NSNISLFTQLFEKQQLGCERKDP*SGRDGL
Trigger: CAAACCATCCCGTCCTGAGCACGGGTCCTTCCTCTC...GCAGCCTAACTGCTGCTTCTCAAATAACTGTGTGAACAGTGAGATATTACTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
3UTR-3UTR CCA 90 bp CCACAGATTTACTCAGGGCAAGTGGAAATACATGTTAAGAATGCTTACCCTAGTTCCTCTGGGCCGAGCTaGTGTTTCGTGACTGGTTCC +
Preference number: 2 (lower is better)
Translates to: PQIYSGQVEIHVKNAYPSSSGPS*CFVTGS
Trigger: GGAACCAGTCACGAAACACCAGCTCGGCCCAGAGGA...ACTAGGGTAAGCATTCTTAACATGTATTTCCACTTGCCCTGAGTAAATCTGTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416496.6
3UTR-3UTR CCA 90 bp ACAACCAACCCGTGCGCTCACCATTCTCATTTTTCAGAGGTACCAACTAACTACATTTCTAGTCTCCTCTaGGCCGAGCTGGTGTTTCGT +
Preference number: 2 (lower is better)
Translates to: TTNPCAHHSHFSEVPTNYISSLL*AELVFR
Trigger: ACGAAACACCAGCTCGGCCCAGAGGAGACTAGAAAT...GTAGTTAGTTGGTACCTCTGAAAAATGAGAATGGTGAGCGCACGGGTTGGTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416496.6
3UTR-3UTR CCA 90 bp AATTTTCACATCATTACTCTTCAGAATTCAACGAAAAGGTCTCATCCAGGTTCCGTGCTCAGGACGGGATaGTTTGCATCCCGCCTCGGA +
Preference number: 2 (lower is better)
Translates to: NFHIITLQNSTKRSHPGSVLRTG*FASRLG
Trigger: TCCGAGGCGGGATGCAAACCATCCCGTCCTGAGCAC...GGAACCTGGATGAGACCTTTTCGTTGAATTCTGAAGAGTAATGATGTGAAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
3UTR CAA 90 bp GGCTCCGGTAGCCTATTCAGATCTACTTCCAGAATAAGACGATTCTaGAATCAAAACCATAAGTCAGTCGGCGCTTTCACTGTGACACCA +
Preference number: 2 (lower is better)
Translates to: GSGSLFRSTSRIRRF*NQNHKSVGAFTVTP
Trigger: TGGTGTCACAGTGAAAGCGCCGACTGACTTATGGTTTTGATTCAAGAATCGTCTTATTCTGGAAGTAGATCTGAATAGGCTACCGGAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
3UTR-3UTR TCA 90 bp CTTCACTACCCAAAATATCCAAGTCTAGCGCAGCAGCTTCAATTCCACCAGTTGGGGAACCATTTACTCTaGAGAGACAAGAGAGAGGTA +
Preference number: 2 (lower is better)
Translates to: LHYPKYPSLAQQLQFHQLGNHLL*RDKREV
Trigger: TACCTCTCTCTTGTCTCTTCAGAGTAAATGGTTCCC...CAACTGGTGGAATTGAAGCTGCTGCGCTAGACTTGGATATTTTGGGTAGTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
3UTR-3UTR TCA 90 bp TCAAGCCCACAGTCAGGGTTAGCACAGTTCATTTACAGCAAGGTGTGTCATTCAAGGAAATCAGATGATTaGTGGTGGTGGGAAGTTAAC +
Preference number: 2 (lower is better)
Translates to: SSPQSGLAQFIYSKVCHSRKSDD*WWWEVN
Trigger: GTTAACTTCCCACCACCATCAATCATCTGATTTCCT...TGAATGACACACCTTGCTGTAAATGAACTGTGCTAACCCTGACTGTGGGCTTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
3UTR-3UTR TCA 90 bp ACAGTTTCCAGAATTGTATTCATGCTAGAACAACCAACCCGTGCGCTCACCATTGTTCACACAGTTATTTaGGAAGCAGCAGTTAGGCTG +
Preference number: 2 (lower is better)
Translates to: TVSRIVFMLEQPTRALTIVHTVI*EAAVRL
Trigger: CAGCCTAACTGCTGCTTCTCAAATAACTGTGTGAAC...AATGGTGAGCGCACGGGTTGGTTGTTCTAGCATGAATACAATTCTGGAAACTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
3UTR-3UTR CCA 90 bp AGTTTGAATACCCTTGGATATGAAACATATGTCCATTTTCCCTCTTACTCTTCTAGTCAGCGCCGCCGCTaGGGATTTCTAGTCTCCTCT +
Preference number: 2 (lower is better)
Translates to: SLNTLGYETYVHFPSYSSSQRRR*GFLVSS
Trigger: AGAGGAGACTAGAAATCCCCAGCGGCGGCGCTGACT...AGAAGAGTAAGAGGGAAAATGGACATATGTTTCATATCCAAGGGTATTCAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000416496.6
3UTR-3UTR TCA 90 bp CTAGCGCAGCAGCTTCAATTCCACCAGTTGTTCTGTAAGATTTATTTTCCTGACGTTCACACAGTTATTTaGGAAGCAGCAGTTAGGCTG +
Preference number: 2 (lower is better)
Translates to: LAQQLQFHQLFCKIYFPDVHTVI*EAAVRL
Trigger: CAGCCTAACTGCTGCTTCTCAAATAACTGTGTGAAC...GTCAGGAAAATAAATCTTACAGAACAACTGGTGGAATTGAAGCTGCTGCGCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
3UTR-3UTR CCA 90 bp TCAAGCCCACAGTCAGGGTTAGCACAGTTCATTTACAGCAAGGTGTGTCATTCAAAGTTAACAGAAGTGTaGATGAAAGAGAGAGGAAGG +
Preference number: 2 (lower is better)
Translates to: SSPQSGLAQFIYSKVCHSKLTEV*MKERGR
Trigger: CCTTCCTCTCTCTTTCATCCACACTTCTGTTAACTT...TGAATGACACACCTTGCTGTAAATGAACTGTGCTAACCCTGACTGTGGGCTTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
3UTR-3UTR TCA 90 bp CTCAAGATTGCCATTGCTTCTTCACTACCCAAAATATCCAAGTCTAGCGCAGCAATACCCTGCACAGATTaGAACCTGAAAAAGGTATAT +
Preference number: 2 (lower is better)
Translates to: LKIAIASSLPKISKSSAAIPCTD*NLKKVY
Trigger: ATATACCTTTTTCAGGTTTCAATCTGTGCAGGGTAT...TGCTGCGCTAGACTTGGATATTTTGGGTAGTGAAGAAGCAATGGCAATCTTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
3UTR-3UTR TCA 90 bp CTAGCGCAGCAGCTTCAATTCCACCAGTTGTTCTGTAAGATTTATTTTCCTGACACCCCTCAGGAATTATaGATTCTGAGGTTAAATGGT +
Preference number: 2 (lower is better)
Translates to: LAQQLQFHQLFCKIYFPDTPQEL*ILRLNG
Trigger: ACCATTTAACCTCAGAATTCATAATTCCTGAGGGGT...GTCAGGAAAATAAATCTTACAGAACAACTGGTGGAATTGAAGCTGCTGCGCTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
3UTR-3UTR TCA 90 bp GTGACACCATGCAGAGTCGGAACTCTAACTGGTATTAAATGCACAATTAATTACAGGAAATCAGATGATTaGTGGTGGTGGGAAGTTAAC +
Preference number: 2 (lower is better)
Translates to: VTPCRVGTLTGIKCTINYRKSDD*WWWEVN
Trigger: GTTAACTTCCCACCACCATCAATCATCTGATTTCCT...GTAATTAATTGTGCATTTAATACCAGTTAGAGTTCCGACTCTGCATGGTGTCAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
3UTR-3UTR CCA 90 bp CCACAGATTTACTCAGGGCAAGTGGAAATACATGTTAAGAATGCTTACCCTAGTAAGTTAACAGAAGTGTaGATGAAAGAGAGAGGAAGG +
Preference number: 2 (lower is better)
Translates to: PQIYSGQVEIHVKNAYPSKLTEV*MKERGR
Trigger: CCTTCCTCTCTCTTTCATCCACACTTCTGTTAACTT...ACTAGGGTAAGCATTCTTAACATGTATTTCCACTTGCCCTGAGTAAATCTGTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
3UTR-3UTR CCA 90 bp TGTATTCATGCTAGAACAACCAACCCGTGCGCTCACCATTCTCATTTTTCAGAGTTTACTCAGGGCAAGTaGAAATACATGTTAAGAATG +
Preference number: 2 (lower is better)
Translates to: CIHARTTNPCAHHSHFSEFTQGK*KYMLRM
Trigger: CATTCTTAACATGTATTTCCACTTGCCCTGAGTAAA...CTCTGAAAAATGAGAATGGTGAGCGCACGGGTTGGTTGTTCTAGCATGAATACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
3UTR CAA 90 bp TGCGCTCACCATTCTCATTTTTCAGAGGTACCAACTAACTACAGTTaGAATACCCTTGGATATGAAACATATGTCCATTTTCCCTCTTAC +
Preference number: 2 (lower is better)
Translates to: CAHHSHFSEVPTNYS*NTLGYETYVHFPSY
Trigger: GTAAGAGGGAAAATGGACATATGTTTCATATCCAAGGGTATTCAAACTGTAGTTAGTTGGTACCTCTGAAAAATGAGAATGGTGAGCGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
3UTR-3UTR TCA 90 bp AACAGTAATATCTCACTGTTCACACAGTTATTTGAGAAGCAGCAGTTAGGCTGCCAGTTATTTTGGTCTTaGCATGTGTCATGTAGATAC +
Preference number: 2 (lower is better)
Translates to: NSNISLFTQLFEKQQLGCQLFWS*HVSCRY
Trigger: GTATCTACATGACACATGTCAAGACCAAAATAACTG...GCAGCCTAACTGCTGCTTCTCAAATAACTGTGTGAACAGTGAGATATTACTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
3UTR-3UTR TCA 90 bp CACATCATTACTCTTCAGAATTCAACGAAAAGGTCTCATCCAGGTTCCAATTTTCAGTTATTTTGGTCTTaGCATGTGTCATGTAGATAC +
Preference number: 2 (lower is better)
Translates to: HIITLQNSTKRSHPGSNFQLFWS*HVSCRY
Trigger: GTATCTACATGACACATGTCAAGACCAAAATAACTG...AAAATTGGAACCTGGATGAGACCTTTTCGTTGAATTCTGAAGAGTAATGATGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
3UTR-3UTR CCA 90 bp AGTTTGAATACCCTTGGATATGAAACATATGTCCATTTTCCCTCTTACTCTTCTTTTACTCAGGGCAAGTaGAAATACATGTTAAGAATG +
Preference number: 2 (lower is better)
Translates to: SLNTLGYETYVHFPSYSSFTQGK*KYMLRM
Trigger: CATTCTTAACATGTATTTCCACTTGCCCTGAGTAAA...AGAAGAGTAAGAGGGAAAATGGACATATGTTTCATATCCAAGGGTATTCAAACT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
3UTR GCA 72 bp GAGAGAGGAAGGACCCGTGCTCAGGACGGGATGGTTTaGATCCCGCCTCGGACATCCGGGACTCTCAGGGCG +
Preference number: 3 (lower is better)
Translates to: ERGRTRAQDGMV*IPPRTSGTLRA
Trigger: CGCCCTGAGAGTCCCGGATGTCCGAGGCGGGATGCAAACCATCCCGTCCTGAGCACGGGTCCTTCCTCTCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
3UTR TCA 72 bp CATCCCGCCTCGGACATCCGGGACTCTCAGGGCGTTTaGTCCCACCCCCACCTGGCAAAGCGGCAGGTTAGT +
Preference number: 3 (lower is better)
Translates to: HPASDIRDSQGV*SHPHLAKRQVS
Trigger: ACTAACCTGCCGCTTTGCCAGGTGGGGGTGGGATCAAACGCCCTGAGAGTCCCGGATGTCCGAGGCGGGATG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000416496.6
3UTR CCA 72 bp TCTAGTCTCCTCTGGGCCGAGCTGGTGTTTCGTGACTaGTTCCTTTCTCTTCTCTTCAGGACAGGGTCTCCA +
Preference number: 3 (lower is better)
Translates to: SSLLWAELVFRD*FLSLLFRTGSP
Trigger: TGGAGACCCTGTCCTGAAGAGAAGAGAAAGGAACCAGTCACGAAACACCAGCTCGGCCCAGAGGAGACTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416496.6
3UTR-3UTR CAA 90 bp ACAGTTTCCAGAATTGTATTCATGCTAGAACAACCAACCCGTGCGCTCACCATTGGACTCTCAGGGCGTTaGATCCCACCCCCACCTGGC +
Preference number: 3 (lower is better)
Translates to: TVSRIVFMLEQPTRALTIGLSGR*IPPPPG
Trigger: GCCAGGTGGGGGTGGGATCAAACGCCCTGAGAGTCC...AATGGTGAGCGCACGGGTTGGTTGTTCTAGCATGAATACAATTCTGGAAACTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
3UTR-3UTR CAA 90 bp CTCAAGATTGCCATTGCTTCTTCACTACCCAAAATATCCAAGTCTAGCGCAGCAGGACTCTCAGGGCGTTaGATCCCACCCCCACCTGGC +
Preference number: 3 (lower is better)
Translates to: LKIAIASSLPKISKSSAAGLSGR*IPPPPG
Trigger: GCCAGGTGGGGGTGGGATCAAACGCCCTGAGAGTCC...TGCTGCGCTAGACTTGGATATTTTGGGTAGTGAAGAAGCAATGGCAATCTTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
3UTR GCA 72 bp AACCATAAGTCAGTCGGCGCTTTCACTGTGACACCATaGAGAGTCGGAACTCTAACTGGTATTAAATGCACA +
Preference number: 3 (lower is better)
Translates to: NHKSVGAFTVTP*RVGTLTGIKCT
Trigger: TGTGCATTTAATACCAGTTAGAGTTCCGACTCTGCATGGTGTCACAGTGAAAGCGCCGACTGACTTATGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
3UTR GCA 72 bp TTGAAGGCTGGTTTACGACCTCGCTCTTCTGTTACATaGACTTTCTTTATCAGAGCCAAGCTGGTCAGAACA +
Preference number: 3 (lower is better)
Translates to: LKAGLRPRSSVT*TFFIRAKLVRT
Trigger: TGTTCTGACCAGCTTGGCTCTGATAAAGAAAGTGCATGTAACAGAAGAGCGAGGTCGTAAACCAGCCTTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552907.5
3UTR CCA 72 bp CTTCTGTTACATGCACTTTCTTTATCAGAGCCAAGCTaGTCAGAACATTGGCTATGTCATAGAGGCGTCGTA +
Preference number: 3 (lower is better)
Translates to: LLLHALSLSEPS*SEHWLCHRGVV
Trigger: TACGACGCCTCTATGACATAGCCAATGTTCTGACCAGCTTGGCTCTGATAAAGAAAGTGCATGTAACAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552907.5
3UTR GCA 72 bp TTCCAGAATTGTATTCATGCTAGAACAACCAACCCGTaGGCTCACCATTCTCATTTTTCAGAGGTACCAACT +
Preference number: 3 (lower is better)
Translates to: FQNCIHARTTNP*AHHSHFSEVPT
Trigger: AGTTGGTACCTCTGAAAAATGAGAATGGTGAGCGCACGGGTTGGTTGTTCTAGCATGAATACAATTCTGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
3UTR-3UTR CAA 90 bp CTAGCGCAGCAGCTTCAATTCCACCAGTTGTTCTGTAAGATTTATTTTCCTGACGACTCAAGATTGCCATaGCTTCTTCACTACCCAAAA +
Preference number: 3 (lower is better)
Translates to: LAQQLQFHQLFCKIYFPDDSRLP*LLHYPK
Trigger: TTTTGGGTAGTGAAGAAGCAATGGCAATCTTGAGTC...GTCAGGAAAATAAATCTTACAGAACAACTGGTGGAATTGAAGCTGCTGCGCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
3UTR TCA 72 bp CCAATGGGACTGCTTCTTAACACCCCTCAGGAATTATaGATTCTGAGGTTAAATGGTCATATCATGATCAGA +
Preference number: 3 (lower is better)
Translates to: PMGLLLNTPQEL*ILRLNGHIMIR
Trigger: TCTGATCATGATATGACCATTTAACCTCAGAATTCATAATTCCTGAGGGGTGTTAAGAAGCAGTCCCATTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
3UTR CAA 72 bp AGAGAGAGGAAGGACCCGTGCTCAGGACGGGATGGTTaGCATCCCGCCTCGGACATCCGGGACTCTCAGGGC +
Preference number: 4 (lower is better)
Translates to: RERKDPCSGRDG*HPASDIRDSQG
Trigger: GCCCTGAGAGTCCCGGATGTCCGAGGCGGGATGCAAACCATCCCGTCCTGAGCACGGGTCCTTCCTCTCTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR GCA 90 bp TGCTCAGGACGGGATGGTTTGCATCCCGCCTCGGACATCCGGGACTCTCAGGGCCAGGACGGGATGGTTTaGATCCCGCCTCGGACATCC +
Preference number: 4 (lower is better)
Translates to: CSGRDGLHPASDIRDSQGQDGMV*IPPRTS
Trigger: GGATGTCCGAGGCGGGATGCAAACCATCCCGTCCTG...GCCCTGAGAGTCCCGGATGTCCGAGGCGGGATGCAAACCATCCCGTCCTGAGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CCA 90 bp ATGGTTTGCATCCCGCCTCGGACATCCGGGACTCTCAGGGCGTTTGATCCCACCGCCGATGAGGGAAGGTaGTGCGGCGATCAGCAGCCG +
Preference number: 4 (lower is better)
Translates to: MVCIPPRTSGTLRAFDPTADEGR*CGDQQP
Trigger: CGGCTGCTGATCGCCGCACCACCTTCCCTCATCGGC...GGTGGGATCAAACGCCCTGAGAGTCCCGGATGTCCGAGGCGGGATGCAAACCAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CCA 90 bp TGCTCAGGACGGGATGGTTTGCATCCCGCCTCGGACATCCGGGACTCTCAGGGCGATCCCACCCCCACCTaGCAAAGCGGCAGGTTAGTC +
Preference number: 4 (lower is better)
Translates to: CSGRDGLHPASDIRDSQGDPTPT*QSGRLV
Trigger: GACTAACCTGCCGCTTTGCCAGGTGGGGGTGGGATC...GCCCTGAGAGTCCCGGATGTCCGAGGCGGGATGCAAACCATCCCGTCCTGAGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR TCA 90 bp TGCTCAGGACGGGATGGTTTGCATCCCGCCTCGGACATCCGGGACTCTCAGGGCCAGGCCCGATCCACTTaGAGGCTGGTTTACGACCTC +
Preference number: 4 (lower is better)
Translates to: CSGRDGLHPASDIRDSQGQARST*RLVYDL
Trigger: GAGGTCGTAAACCAGCCTTCAAGTGGATCGGGCCTG...GCCCTGAGAGTCCCGGATGTCCGAGGCGGGATGCAAACCATCCCGTCCTGAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR TCA 90 bp CCGTGCTCAGGACGGGATGGTTTGCATCCCGCCTCGGACATCCGGGACTCTCAGTCACAGAGGCGCTTCTaGGCTGAGGGTGCAGATGAC +
Preference number: 4 (lower is better)
Translates to: PCSGRDGLHPASDIRDSQSQRRF*AEGADD
Trigger: GTCATCTGCACCCTCAGCTCAGAAGCGCCTCTGTGA...CTGAGAGTCCCGGATGTCCGAGGCGGGATGCAAACCATCCCGTCCTGAGCACGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR GCA 90 bp TGCTCAGGACGGGATGGTTTGCATCCCGCCTCGGACATCCGGGACTCTCAGGGCGAGAGGAAGGACCCGTaGTCAGGACGGGATGGTTTG +
Preference number: 4 (lower is better)
Translates to: CSGRDGLHPASDIRDSQGERKDP*SGRDGL
Trigger: CAAACCATCCCGTCCTGAGCACGGGTCCTTCCTCTC...GCCCTGAGAGTCCCGGATGTCCGAGGCGGGATGCAAACCATCCCGTCCTGAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR TCA 90 bp CCGTGCTCAGGACGGGATGGTTTGCATCCCGCCTCGGACATCCGGGACTCTCAGGCCTGCAGGTCCGTCTaGGCAACAGAAAATACTGGG +
Preference number: 4 (lower is better)
Translates to: PCSGRDGLHPASDIRDSQACRSV*ATENTG
Trigger: CCCAGTATTTTCTGTTGCTCAGACGGACCTGCAGGC...CTGAGAGTCCCGGATGTCCGAGGCGGGATGCAAACCATCCCGTCCTGAGCACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR GCA 90 bp TGCTCAGGACGGGATGGTTTGCATCCCGCCTCGGACATCCGGGACTCTCAGGGCCAACAGGGTCCAAGCTaGTTGATGGAGGCACCACTC +
Preference number: 4 (lower is better)
Translates to: CSGRDGLHPASDIRDSQGQQGPS*LMEAPL
Trigger: GAGTGGTGCCTCCATCAAGCAGCTTGGACCCTGTTG...GCCCTGAGAGTCCCGGATGTCCGAGGCGGGATGCAAACCATCCCGTCCTGAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR GCA 90 bp CCGTGCTCAGGACGGGATGGTTTGCATCCCGCCTCGGACATCCGGGACTCTCAGCAACAGGGTCCAAGCTaGTTGATGGAGGCACCACTC +
Preference number: 4 (lower is better)
Translates to: PCSGRDGLHPASDIRDSQQQGPS*LMEAPL
Trigger: GAGTGGTGCCTCCATCAAGCAGCTTGGACCCTGTTG...CTGAGAGTCCCGGATGTCCGAGGCGGGATGCAAACCATCCCGTCCTGAGCACGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CCA 90 bp CCGTGCTCAGGACGGGATGGTTTGCATCCCGCCTCGGACATCCGGGACTCTCAGACATACACTAGAGGCTaGCCAGCAAGGAGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: PCSGRDGLHPASDIRDSQTYTRG*PARSAG
Trigger: GCCAGCACTCCTTGCTGGCCAGCCTCTAGTGTATGT...CTGAGAGTCCCGGATGTCCGAGGCGGGATGCAAACCATCCCGTCCTGAGCACGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR TCA 90 bp TGCTCAGGACGGGATGGTTTGCATCCCGCCTCGGACATCCGGGACTCTCAGGGCCAGTTCTTCATCACTTaGGCTGAAGTCCACAGGCCC +
Preference number: 4 (lower is better)
Translates to: CSGRDGLHPASDIRDSQGQFFIT*AEVHRP
Trigger: GGGCCTGTGGACTTCAGCTCAAGTGATGAAGAACTG...GCCCTGAGAGTCCCGGATGTCCGAGGCGGGATGCAAACCATCCCGTCCTGAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR TCA 90 bp CCGTGCTCAGGACGGGATGGTTTGCATCCCGCCTCGGACATCCGGGACTCTCAGCGAGCTGGTGTTTCGTaGCTGGTTCCTTTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: PCSGRDGLHPASDIRDSQRAGVS*LVPFSS
Trigger: AGAAGAGAAAGGAACCAGTCACGAAACACCAGCTCG...CTGAGAGTCCCGGATGTCCGAGGCGGGATGCAAACCATCCCGTCCTGAGCACGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR TCA 90 bp ATGGTTTGCATCCCGCCTCGGACATCCGGGACTCTCAGGGCGTTTGATCCCACCTGGGCTGCCTGGGGCTaGTCAGGTCTTTTAGTGTTA +
Preference number: 4 (lower is better)
Translates to: MVCIPPRTSGTLRAFDPTWAAWG*SGLLVL
Trigger: TAACACTAAAAGACCTGATCAGCCCCAGGCAGCCCA...GGTGGGATCAAACGCCCTGAGAGTCCCGGATGTCCGAGGCGGGATGCAAACCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR TCA 90 bp CCGTGCTCAGGACGGGATGGTTTGCATCCCGCCTCGGACATCCGGGACTCTCAGCAGCCACATCCAGAGTaGCAATCTTGGTTTTGGAGA +
Preference number: 4 (lower is better)
Translates to: PCSGRDGLHPASDIRDSQQPHPE*QSWFWR
Trigger: TCTCCAAAACCAAGATTGTCACTCTGGATGTGGCTG...CTGAGAGTCCCGGATGTCCGAGGCGGGATGCAAACCATCCCGTCCTGAGCACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CCA 90 bp ATGGTTTGCATCCCGCCTCGGACATCCGGGACTCTCAGGGCGTTTGATCCCACCATGACAGCTCTACTGTaGCTGGGGCTTCTGAGCTTC +
Preference number: 4 (lower is better)
Translates to: MVCIPPRTSGTLRAFDPTMTALL*LGLLSF
Trigger: GAAGCTCAGAAGCCCCAGCCACAGTAGAGCTGTCAT...GGTGGGATCAAACGCCCTGAGAGTCCCGGATGTCCGAGGCGGGATGCAAACCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR TCA 90 bp TGCTCAGGACGGGATGGTTTGCATCCCGCCTCGGACATCCGGGACTCTCAGGGCGGGAACCATTTACTCTaGAGAGACAAGAGAGAGGTA +
Preference number: 4 (lower is better)
Translates to: CSGRDGLHPASDIRDSQGGNHLL*RDKREV
Trigger: TACCTCTCTCTTGTCTCTTCAGAGTAAATGGTTCCC...GCCCTGAGAGTCCCGGATGTCCGAGGCGGGATGCAAACCATCCCGTCCTGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR GCA 90 bp TGCTCAGGACGGGATGGTTTGCATCCCGCCTCGGACATCCGGGACTCTCAGGGCGTGACTGCAGGAGACTaGACACAAAGATATTGTAGC +
Preference number: 4 (lower is better)
Translates to: CSGRDGLHPASDIRDSQGVTAGD*TQRYCS
Trigger: GCTACAATATCTTTGTGTGCAGTCTCCTGCAGTCAC...GCCCTGAGAGTCCCGGATGTCCGAGGCGGGATGCAAACCATCCCGTCCTGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416496.6
CDS-3UTR CCA 90 bp ATGGTTTGCATCCCGCCTCGGACATCCGGGACTCTCAGGGCGTTTGATCCCACCGAGTGTGGACGACTTTaGATTAACCACAGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: MVCIPPRTSGTLRAFDPTECGRL*INHSCG
Trigger: CCCACAGCTGTGGTTAATCCAAAGTCGTCCACACTC...GGTGGGATCAAACGCCCTGAGAGTCCCGGATGTCCGAGGCGGGATGCAAACCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322886.12
CDS-3UTR TCA 90 bp ATGGTTTGCATCCCGCCTCGGACATCCGGGACTCTCAGGGCGTTTGATCCCACCTTTCCACACCAAGACTaGCAGCAACTTCATCTAGGG +
Preference number: 4 (lower is better)
Translates to: MVCIPPRTSGTLRAFDPTFPHQD*QQLHLG
Trigger: CCCTAGATGAAGTTGCTGTCAGTCTTGGTGTGGAAA...GGTGGGATCAAACGCCCTGAGAGTCCCGGATGTCCGAGGCGGGATGCAAACCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR TCA 90 bp GCTGAAGTCCACAGGCCCGATCCACTTGAAGGCTGGTTTACGACCTCGCTCTTCCAGTTCTTCATCACTTaGGCTGAAGTCCACAGGCCC +
Preference number: 4 (lower is better)
Translates to: AEVHRPDPLEGWFTTSLFQFFIT*AEVHRP
Trigger: GGGCCTGTGGACTTCAGCTCAAGTGATGAAGAACTG...GAAGAGCGAGGTCGTAAACCAGCCTTCAAGTGGATCGGGCCTGTGGACTTCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552907.5
CDS-3UTR TCA 90 bp CCGTGCTCAGGACGGGATGGTTTGCATCCCGCCTCGGACATCCGGGACTCTCAGATCCTCTCAGAAGCCTaGACTGTGTTAAAAGAACCA +
Preference number: 4 (lower is better)
Translates to: PCSGRDGLHPASDIRDSQILSEA*TVLKEP
Trigger: TGGTTCTTTTAACACAGTTCAGGCTTCTGAGAGGAT...CTGAGAGTCCCGGATGTCCGAGGCGGGATGCAAACCATCCCGTCCTGAGCACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR GCA 90 bp TGCTCAGGACGGGATGGTTTGCATCCCGCCTCGGACATCCGGGACTCTCAGGGCTTTGAGGGGTATAGATaGCCTGTTACCCATAGTCTT +
Preference number: 4 (lower is better)
Translates to: CSGRDGLHPASDIRDSQGFEGYR*PVTHSL
Trigger: AAGACTATGGGTAACAGGGCATCTATACCCCTCAAA...GCCCTGAGAGTCCCGGATGTCCGAGGCGGGATGCAAACCATCCCGTCCTGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CCA 90 bp TGCTCAGGACGGGATGGTTTGCATCCCGCCTCGGACATCCGGGACTCTCAGGGCCGTCCTTGTTTTCAATaGGTCGGAATAGTCCCTTTT +
Preference number: 4 (lower is better)
Translates to: CSGRDGLHPASDIRDSQGRPCFQ*VGIVPF
Trigger: AAAAGGGACTATTCCGACCCATTGAAAACAAGGACG...GCCCTGAGAGTCCCGGATGTCCGAGGCGGGATGCAAACCATCCCGTCCTGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR TCA 90 bp CTTCACTACCCAAAATATCCAAGTCTAGCGCAGCAGCTTCAATTCCACCAGTTGACGGACCCAAGCCGATaGGGGAAGGTGGTGCGGCGA +
Preference number: 4 (lower is better)
Translates to: LHYPKYPSLAQQLQFHQLTDPSR*GKVVRR
Trigger: TCGCCGCACCACCTTCCCTCATCGGCTTGGGTCCGT...CAACTGGTGGAATTGAAGCTGCTGCGCTAGACTTGGATATTTTGGGTAGTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR TCA 90 bp AGTGTGGATGAAAGAGAGAGGAAGGACCCGTGCTCAGGACGGGATGGTTTGCATAGGGTCCAAGCTGCTTaGTGGAGGCACCACTCTCTT +
Preference number: 4 (lower is better)
Translates to: SVDERERKDPCSGRDGLHRVQAA*WRHHSL
Trigger: AAGAGAGTGGTGCCTCCATCAAGCAGCTTGGACCCT...ATGCAAACCATCCCGTCCTGAGCACGGGTCCTTCCTCTCTCTTTCATCCACACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR TCA 90 bp ATGGTTTGCATCCCGCCTCGGACATCCGGGACTCTCAGGGCGTTTGATCCCACCGTTCACACAGTTATTTaGGAAGCAGCAGTTAGGCTG +
Preference number: 4 (lower is better)
Translates to: MVCIPPRTSGTLRAFDPTVHTVI*EAAVRL
Trigger: CAGCCTAACTGCTGCTTCTCAAATAACTGTGTGAAC...GGTGGGATCAAACGCCCTGAGAGTCCCGGATGTCCGAGGCGGGATGCAAACCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR GCA 90 bp TCAAGCCCACAGTCAGGGTTAGCACAGTTCATTTACAGCAAGGTGTGTCATTCAGATGAGGGAAGGTGGTaGGGCGATCAGCAGCCGGGC +
Preference number: 4 (lower is better)
Translates to: SSPQSGLAQFIYSKVCHSDEGRW*GDQQPG
Trigger: GCCCGGCTGCTGATCGCCGCACCACCTTCCCTCATC...TGAATGACACACCTTGCTGTAAATGAACTGTGCTAACCCTGACTGTGGGCTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR GCA 90 bp ATGGTTTGCATCCCGCCTCGGACATCCGGGACTCTCAGGGCGTTTGATCCCACCGTCCATGGTTCCGCTTaGTGTCTGTCAACAAACTTA +
Preference number: 4 (lower is better)
Translates to: MVCIPPRTSGTLRAFDPTVHGSA*CLSTNL
Trigger: TAAGTTTGTTGACAGACAGCAAGCGGAACCATGGAC...GGTGGGATCAAACGCCCTGAGAGTCCCGGATGTCCGAGGCGGGATGCAAACCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CCA 90 bp TCAAGCCCACAGTCAGGGTTAGCACAGTTCATTTACAGCAAGGTGTGTCATTCAGCCGATGAGGGAAGGTaGTGCGGCGATCAGCAGCCG +
Preference number: 4 (lower is better)
Translates to: SSPQSGLAQFIYSKVCHSADEGR*CGDQQP
Trigger: CGGCTGCTGATCGCCGCACCACCTTCCCTCATCGGC...TGAATGACACACCTTGCTGTAAATGAACTGTGCTAACCCTGACTGTGGGCTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CCA 90 bp AGTGTGGATGAAAGAGAGAGGAAGGACCCGTGCTCAGGACGGGATGGTTTGCATGTTCCTCAGGGTTTTTaGCAGGCTGTGCCGTCCATG +
Preference number: 4 (lower is better)
Translates to: SVDERERKDPCSGRDGLHVPQGF*QAVPSM
Trigger: CATGGACGGCACAGCCTGCCAAAAACCCTGAGGAAC...ATGCAAACCATCCCGTCCTGAGCACGGGTCCTTCCTCTCTCTTTCATCCACACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CCA 90 bp TGCTCAGGACGGGATGGTTTGCATCCCGCCTCGGACATCCGGGACTCTCAGGGCAGCATGACAAACTTCTaGCTCATAATTCTCAGAGAC +
Preference number: 4 (lower is better)
Translates to: CSGRDGLHPASDIRDSQGSMTNF*LIILRD
Trigger: GTCTCTGAGAATTATGAGCCAGAAGTTTGTCATGCT...GCCCTGAGAGTCCCGGATGTCCGAGGCGGGATGCAAACCATCCCGTCCTGAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CCA 90 bp AGTGTGGATGAAAGAGAGAGGAAGGACCCGTGCTCAGGACGGGATGGTTTGCATTCAGACCGTTCTGCATaGAGAATGCCTGCAGGTCCG +
Preference number: 4 (lower is better)
Translates to: SVDERERKDPCSGRDGLHSDRSA*RMPAGP
Trigger: CGGACCTGCAGGCATTCTCCATGCAGAACGGTCTGA...ATGCAAACCATCCCGTCCTGAGCACGGGTCCTTCCTCTCTCTTTCATCCACACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR TCA 90 bp ACAGTTTCCAGAATTGTATTCATGCTAGAACAACCAACCCGTGCGCTCACCATTACGGACCCAAGCCGATaGGGGAAGGTGGTGCGGCGA +
Preference number: 4 (lower is better)
Translates to: TVSRIVFMLEQPTRALTITDPSR*GKVVRR
Trigger: TCGCCGCACCACCTTCCCTCATCGGCTTGGGTCCGT...AATGGTGAGCGCACGGGTTGGTTGTTCTAGCATGAATACAATTCTGGAAACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR TCA 90 bp TCAAGCCCACAGTCAGGGTTAGCACAGTTCATTTACAGCAAGGTGTGTCATTCAGACTCTCAGGGCGTTTaGTCCCACCCCCACCTGGCA +
Preference number: 4 (lower is better)
Translates to: SSPQSGLAQFIYSKVCHSDSQGV*SHPHLA
Trigger: TGCCAGGTGGGGGTGGGATCAAACGCCCTGAGAGTC...TGAATGACACACCTTGCTGTAAATGAACTGTGCTAACCCTGACTGTGGGCTTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR TCA 90 bp ACAACCAACCCGTGCGCTCACCATTCTCATTTTTCAGAGGTACCAACTAACTACGACTCTCAGGGCGTTTaGTCCCACCCCCACCTGGCA +
Preference number: 4 (lower is better)
Translates to: TTNPCAHHSHFSEVPTNYDSQGV*SHPHLA
Trigger: TGCCAGGTGGGGGTGGGATCAAACGCCCTGAGAGTC...GTAGTTAGTTGGTACCTCTGAAAAATGAGAATGGTGAGCGCACGGGTTGGTTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR TCA 90 bp ATGGTTTGCATCCCGCCTCGGACATCCGGGACTCTCAGGGCGTTTGATCCCACCGGTAGTTTTCTCAGTTaGCAAGGGATAACTTGGATA +
Preference number: 4 (lower is better)
Translates to: MVCIPPRTSGTLRAFDPTGSFLS*QGITWI
Trigger: TATCCAAGTTATCCCTTGTCAACTGAGAAAACTACC...GGTGGGATCAAACGCCCTGAGAGTCCCGGATGTCCGAGGCGGGATGCAAACCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR GCA 90 bp AGAAAGGAAGCTTCTCTCACCACAGATTTACTCAGGGCAAGTGGAAATACATGTGATGAGGGAAGGTGGTaGGGCGATCAGCAGCCGGGC +
Preference number: 4 (lower is better)
Translates to: RKEASLTTDLLRASGNTCDEGRW*GDQQPG
Trigger: GCCCGGCTGCTGATCGCCGCACCACCTTCCCTCATC...ACATGTATTTCCACTTGCCCTGAGTAAATCTGTGGTGAGAGAAGCTTCCTTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CCA 90 bp CTTCACTACCCAAAATATCCAAGTCTAGCGCAGCAGCTTCAATTCCACCAGTTGGCCAGCAAGGAGTGCTaGCTTCAGGCTCTCCACAGC +
Preference number: 4 (lower is better)
Translates to: LHYPKYPSLAQQLQFHQLASKEC*LQALHS
Trigger: GCTGTGGAGAGCCTGAAGCCAGCACTCCTTGCTGGC...CAACTGGTGGAATTGAAGCTGCTGCGCTAGACTTGGATATTTTGGGTAGTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR TCA 90 bp AAGTCCACAGGCCCGATCCACTTGAAGGCTGGTTTACGACCTCGCTCTTCTGTTCAGCCACATCCAGAGTaGCAATCTTGGTTTTGGAGA +
Preference number: 4 (lower is better)
Translates to: KSTGPIHLKAGLRPRSSVQPHPE*QSWFWR
Trigger: TCTCCAAAACCAAGATTGTCACTCTGGATGTGGCTG...AACAGAAGAGCGAGGTCGTAAACCAGCCTTCAAGTGGATCGGGCCTGTGGACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552907.5
CDS-3UTR TCA 90 bp ATGGTTTGCATCCCGCCTCGGACATCCGGGACTCTCAGGGCGTTTGATCCCACCCAGTTATTTTGGTCTTaGCATGTGTCATGTAGATAC +
Preference number: 4 (lower is better)
Translates to: MVCIPPRTSGTLRAFDPTQLFWS*HVSCRY
Trigger: GTATCTACATGACACATGTCAAGACCAAAATAACTG...GGTGGGATCAAACGCCCTGAGAGTCCCGGATGTCCGAGGCGGGATGCAAACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR GCA 90 bp AGTGTGGATGAAAGAGAGAGGAAGGACCCGTGCTCAGGACGGGATGGTTTGCATATTTACCTCCATCCCTaGTTTCCTAAGGAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: SVDERERKDPCSGRDGLHIYLHP*FPKEAS
Trigger: GGAAGCCTCCTTAGGAAAGCAGGGATGGAGGTAAAT...ATGCAAACCATCCCGTCCTGAGCACGGGTCCTTCCTCTCTCTTTCATCCACACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR GCA 90 bp ACAGTTTCCAGAATTGTATTCATGCTAGAACAACCAACCCGTGCGCTCACCATTCAGGACGGGATGGTTTaGATCCCGCCTCGGACATCC +
Preference number: 4 (lower is better)
Translates to: TVSRIVFMLEQPTRALTIQDGMV*IPPRTS
Trigger: GGATGTCCGAGGCGGGATGCAAACCATCCCGTCCTG...AATGGTGAGCGCACGGGTTGGTTGTTCTAGCATGAATACAATTCTGGAAACTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CCA 90 bp GAGCTGAAGTCCACAGGCCCGATCCACTTGAAGGCTGGTTTACGACCTCGCTCTTTATCAGAGCCAAGCTaGTCAGAACATTGGCTATGT +
Preference number: 4 (lower is better)
Translates to: ELKSTGPIHLKAGLRPRSLSEPS*SEHWLC
Trigger: ACATAGCCAATGTTCTGACCAGCTTGGCTCTGATAA...AGAGCGAGGTCGTAAACCAGCCTTCAAGTGGATCGGGCCTGTGGACTTCAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552907.5
CDS-3UTR CCA 90 bp ATGGTTTGCATCCCGCCTCGGACATCCGGGACTCTCAGGGCGTTTGATCCCACCACAGAAAATACTGGGTaGGCTAAAGGATTAACACAA +
Preference number: 4 (lower is better)
Translates to: MVCIPPRTSGTLRAFDPTTENTG*AKGLTQ
Trigger: TTGTGTTAATCCTTTAGCCCACCCAGTATTTTCTGT...GGTGGGATCAAACGCCCTGAGAGTCCCGGATGTCCGAGGCGGGATGCAAACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CCA 90 bp CTTCACTACCCAAAATATCCAAGTCTAGCGCAGCAGCTTCAATTCCACCAGTTGAGTCAGCGCCGCCGCTaGGGATTTCTAGTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: LHYPKYPSLAQQLQFHQLSQRRR*GFLVSS
Trigger: AGAGGAGACTAGAAATCCCCAGCGGCGGCGCTGACT...CAACTGGTGGAATTGAAGCTGCTGCGCTAGACTTGGATATTTTGGGTAGTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CCA 90 bp TGTATTCATGCTAGAACAACCAACCCGTGCGCTCACCATTCTCATTTTTCAGAGGTGCTCAGGACGGGATaGTTTGCATCCCGCCTCGGA +
Preference number: 4 (lower is better)
Translates to: CIHARTTNPCAHHSHFSEVLRTG*FASRLG
Trigger: TCCGAGGCGGGATGCAAACCATCCCGTCCTGAGCAC...CTCTGAAAAATGAGAATGGTGAGCGCACGGGTTGGTTGTTCTAGCATGAATACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR TCA 90 bp CTCAAGATTGCCATTGCTTCTTCACTACCCAAAATATCCAAGTCTAGCGCAGCACCATGCCAGCCATACTaGTTCTTAGCCACCCGGCTG +
Preference number: 4 (lower is better)
Translates to: LKIAIASSLPKISKSSAAPCQPY*FLATRL
Trigger: CAGCCGGGTGGCTAAGAATCAGTATGGCTGGCATGG...TGCTGCGCTAGACTTGGATATTTTGGGTAGTGAAGAAGCAATGGCAATCTTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR TCA 90 bp AAGGCTGGTTTACGACCTCGCTCTTCTGTTACATGCACTTTCTTTATCAGAGCCCTTCATCACTTGAGCTaGAGTCCACAGGCCCGATCC +
Preference number: 4 (lower is better)
Translates to: KAGLRPRSSVTCTFFIRALHHLS*SPQARS
Trigger: GGATCGGGCCTGTGGACTTCAGCTCAAGTGATGAAG...GGCTCTGATAAAGAAAGTGCATGTAACAGAAGAGCGAGGTCGTAAACCAGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552907.5
CDS-3UTR TCA 90 bp CTTCACTACCCAAAATATCCAAGTCTAGCGCAGCAGCTTCAATTCCACCAGTTGGCCTGCAGGTCCGTCTaGGCAACAGAAAATACTGGG +
Preference number: 4 (lower is better)
Translates to: LHYPKYPSLAQQLQFHQLACRSV*ATENTG
Trigger: CCCAGTATTTTCTGTTGCTCAGACGGACCTGCAGGC...CAACTGGTGGAATTGAAGCTGCTGCGCTAGACTTGGATATTTTGGGTAGTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR TCA 90 bp CTAGCGCAGCAGCTTCAATTCCACCAGTTGTTCTGTAAGATTTATTTTCCTGACAGGGTTTCTTGGGCATaGCAAGCGACAGCGGGCCGT +
Preference number: 4 (lower is better)
Translates to: LAQQLQFHQLFCKIYFPDRVSWA*QATAGR
Trigger: ACGGCCCGCTGTCGCTTGTCATGCCCAAGAAACCCT...GTCAGGAAAATAAATCTTACAGAACAACTGGTGGAATTGAAGCTGCTGCGCTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR TCA 90 bp ACAGTTTCCAGAATTGTATTCATGCTAGAACAACCAACCCGTGCGCTCACCATTGGTCACTGGAACTGGTaGCTGCAGGAGACTGCACAC +
Preference number: 4 (lower is better)
Translates to: TVSRIVFMLEQPTRALTIGHWNW*LQETAH
Trigger: GTGTGCAGTCTCCTGCAGTCACCAGTTCCAGTGACC...AATGGTGAGCGCACGGGTTGGTTGTTCTAGCATGAATACAATTCTGGAAACTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000416496.6
CDS-3UTR GCA 90 bp TCAAGCCCACAGTCAGGGTTAGCACAGTTCATTTACAGCAAGGTGTGTCATTCAACCCGGCTGACCAGATaGAGCGACTCCAGCACATTT +
Preference number: 4 (lower is better)
Translates to: SSPQSGLAQFIYSKVCHSTRLTR*SDSSTF
Trigger: AAATGTGCTGGAGTCGCTGCATCTGGTCAGCCGGGT...TGAATGACACACCTTGCTGTAAATGAACTGTGCTAACCCTGACTGTGGGCTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR GCA 90 bp GGTAAGACAGATGCAGAAACATCCACCAGTTCTTCATCACTTGAGCTGAAGTCCACCCGGCTGACCAGATaGAGCGACTCCAGCACATTT +
Preference number: 4 (lower is better)
Translates to: GKTDAETSTSSSSLELKSTRLTR*SDSSTF
Trigger: AAATGTGCTGGAGTCGCTGCATCTGGTCAGCCGGGT...GGACTTCAGCTCAAGTGATGAAGAACTGGTGGATGTTTCTGCATCTGTCTTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552907.5
CDS-3UTR GCA 90 bp ACAACCAACCCGTGCGCTCACCATTCTCATTTTTCAGAGGTACCAACTAACTACGACGCTGGTCCCTCCTaGAGACTTCCATACAGCATG +
Preference number: 4 (lower is better)
Translates to: TTNPCAHHSHFSEVPTNYDAGPS*RLPYSM
Trigger: CATGCTGTATGGAAGTCTGCAGGAGGGACCAGCGTC...GTAGTTAGTTGGTACCTCTGAAAAATGAGAATGGTGAGCGCACGGGTTGGTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CCA 90 bp TCAAGCCCACAGTCAGGGTTAGCACAGTTCATTTACAGCAAGGTGTGTCATTCAAGCTGTGGGTGTCCATaGTTCCGCTTGCTGTCTGTC +
Preference number: 4 (lower is better)
Translates to: SSPQSGLAQFIYSKVCHSSCGCP*FRLLSV
Trigger: GACAGACAGCAAGCGGAACCATGGACACCCACAGCT...TGAATGACACACCTTGCTGTAAATGAACTGTGCTAACCCTGACTGTGGGCTTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CCA 90 bp GTCCACAGGCCCGATCCACTTGAAGGCTGGTTTACGACCTCGCTCTTCTGTTACAGTAACTGTTGTTCCTaGGAATCTGGATCACCATCT +
Preference number: 4 (lower is better)
Translates to: VHRPDPLEGWFTTSLFCYSNCCS*ESGSPS
Trigger: AGATGGTGATCCAGATTCCCAGGAACAACAGTTACT...GTAACAGAAGAGCGAGGTCGTAAACCAGCCTTCAAGTGGATCGGGCCTGTGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552907.5
CDS-3UTR CCA 90 bp CTAGCGCAGCAGCTTCAATTCCACCAGTTGTTCTGTAAGATTTATTTTCCTGACGATCCCACCCCCACCTaGCAAAGCGGCAGGTTAGTC +
Preference number: 4 (lower is better)
Translates to: LAQQLQFHQLFCKIYFPDDPTPT*QSGRLV
Trigger: GACTAACCTGCCGCTTTGCCAGGTGGGGGTGGGATC...GTCAGGAAAATAAATCTTACAGAACAACTGGTGGAATTGAAGCTGCTGCGCTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR TCA 90 bp AGAAAGGAAGCTTCTCTCACCACAGATTTACTCAGGGCAAGTGGAAATACATGTCCATGCCAGCCATACTaGTTCTTAGCCACCCGGCTG +
Preference number: 4 (lower is better)
Translates to: RKEASLTTDLLRASGNTCPCQPY*FLATRL
Trigger: CAGCCGGGTGGCTAAGAATCAGTATGGCTGGCATGG...ACATGTATTTCCACTTGCCCTGAGTAAATCTGTGGTGAGAGAAGCTTCCTTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR TCA 90 bp CTTCTGTTACATGCACTTTCTTTATCAGAGCCAAGCTGGTCAGAACATTGGCTACCATGCCAGCCATACTaGTTCTTAGCCACCCGGCTG +
Preference number: 4 (lower is better)
Translates to: LLLHALSLSEPSWSEHWLPCQPY*FLATRL
Trigger: CAGCCGGGTGGCTAAGAATCAGTATGGCTGGCATGG...TAGCCAATGTTCTGACCAGCTTGGCTCTGATAAAGAAAGTGCATGTAACAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552907.5
CDS-3UTR TCA 90 bp CTGTTACATGCACTTTCTTTATCAGAGCCAAGCTGGTCAGAACATTGGCTATGTCAGGCCCGATCCACTTaGAGGCTGGTTTACGACCTC +
Preference number: 4 (lower is better)
Translates to: LLHALSLSEPSWSEHWLCQARST*RLVYDL
Trigger: GAGGTCGTAAACCAGCCTTCAAGTGGATCGGGCCTG...ACATAGCCAATGTTCTGACCAGCTTGGCTCTGATAAAGAAAGTGCATGTAACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552907.5
CDS-3UTR TCA 90 bp CACAGATTTACTCAGGGCAAGTGGAAATACATGTTAAGAATGCTTACCCTAGTTCTGAAAGACGGCAGCTaGCCTGAGGACGGGCCCACA +
Preference number: 4 (lower is better)
Translates to: HRFTQGKWKYMLRMLTLVLKDGS*PEDGPT
Trigger: TGTGGGCCCGTCCTCAGGTCAGCTGCCGTCTTTCAG...AACTAGGGTAAGCATTCTTAACATGTATTTCCACTTGCCCTGAGTAAATCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322886.12
CDS-3UTR TCA 90 bp TGTATTCATGCTAGAACAACCAACCCGTGCGCTCACCATTCTCATTTTTCAGAGTCGGCGCTTTCACTGTaGCACCATGCAGAGTCGGAA +
Preference number: 4 (lower is better)
Translates to: CIHARTTNPCAHHSHFSESALSL*HHAESE
Trigger: TTCCGACTCTGCATGGTGTCACAGTGAAAGCGCCGA...CTCTGAAAAATGAGAATGGTGAGCGCACGGGTTGGTTGTTCTAGCATGAATACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR GCA 90 bp GCTCTTCTGTTACATGCACTTTCTTTATCAGAGCCAAGCTGGTCAGAACATTGGGTTTTTGGCAGGCTGTaGCGTCCATGCCAGCCATAC +
Preference number: 4 (lower is better)
Translates to: ALLLHALSLSEPSWSEHWVFGRL*RPCQPY
Trigger: GTATGGCTGGCATGGACGGCACAGCCTGCCAAAAAC...CCAATGTTCTGACCAGCTTGGCTCTGATAAAGAAAGTGCATGTAACAGAAGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552907.5
CDS-3UTR GCA 90 bp AGACGATTCTTGAATCAAAACCATAAGTCAGTCGGCGCTTTCACTGTGACACCAGTTCTGCATGGAGAATaGCTGCAGGTCCGTCTGAGC +
Preference number: 4 (lower is better)
Translates to: RRFLNQNHKSVGAFTVTPVLHGE*LQVRLS
Trigger: GCTCAGACGGACCTGCAGGCATTCTCCATGCAGAAC...TGGTGTCACAGTGAAAGCGCCGACTGACTTATGGTTTTGATTCAAGAATCGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR GCA 90 bp CTCTCACCACAGATTTACTCAGGGCAAGTGGAAATACATGTTAAGAATGCTTACCTGGCCAGCAAGGAGTaGTGGCTTCAGGCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: LSPQIYSGQVEIHVKNAYLASKE*WLQALH
Trigger: GTGGAGAGCCTGAAGCCAGCACTCCTTGCTGGCCAG...GTAAGCATTCTTAACATGTATTTCCACTTGCCCTGAGTAAATCTGTGGTGAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR GCA 90 bp CTAGCGCAGCAGCTTCAATTCCACCAGTTGTTCTGTAAGATTTATTTTCCTGACGAGAGGAAGGACCCGTaGTCAGGACGGGATGGTTTG +
Preference number: 4 (lower is better)
Translates to: LAQQLQFHQLFCKIYFPDERKDP*SGRDGL
Trigger: CAAACCATCCCGTCCTGAGCACGGGTCCTTCCTCTC...GTCAGGAAAATAAATCTTACAGAACAACTGGTGGAATTGAAGCTGCTGCGCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CCA 90 bp GCTCTTCTGTTACATGCACTTTCTTTATCAGAGCCAAGCTGGTCAGAACATTGGGTTCCTCAGGGTTTTTaGCAGGCTGTGCCGTCCATG +
Preference number: 4 (lower is better)
Translates to: ALLLHALSLSEPSWSEHWVPQGF*QAVPSM
Trigger: CATGGACGGCACAGCCTGCCAAAAACCCTGAGGAAC...CCAATGTTCTGACCAGCTTGGCTCTGATAAAGAAAGTGCATGTAACAGAAGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000552907.5
CDS-3UTR CCA 90 bp GCTGGTCAGAACATTGGCTATGTCATAGAGGCGTCGTACCTTTGCTGTAGACAAGATCCACTTGAAGGCTaGTTTACGACCTCGCTCTTC +
Preference number: 4 (lower is better)
Translates to: AGQNIGYVIEASYLCCRQDPLEG*FTTSLF
Trigger: GAAGAGCGAGGTCGTAAACCAGCCTTCAAGTGGATC...TTGTCTACAGCAAAGGTACGACGCCTCTATGACATAGCCAATGTTCTGACCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552907.5
CDS-3UTR CCA 90 bp CTCAAGATTGCCATTGCTTCTTCACTACCCAAAATATCCAAGTCTAGCGCAGCATGCGTTGGATGCTCTTaGGGGTCACTGGAACTGGTG +
Preference number: 4 (lower is better)
Translates to: LKIAIASSLPKISKSSAACVGCS*GSLELV
Trigger: CACCAGTTCCAGTGACCCCCAAGAGCATCCAACGCA...TGCTGCGCTAGACTTGGATATTTTGGGTAGTGAAGAAGCAATGGCAATCTTGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CCA 90 bp ACAACCAACCCGTGCGCTCACCATTCTCATTTTTCAGAGGTACCAACTAACTACTCACGATGTGTGCGTTaGATGCTCTTGGGGGTCACT +
Preference number: 4 (lower is better)
Translates to: TTNPCAHHSHFSEVPTNYSRCVR*MLLGVT
Trigger: AGTGACCCCCAAGAGCATCCAACGCACACATCGTGA...GTAGTTAGTTGGTACCTCTGAAAAATGAGAATGGTGAGCGCACGGGTTGGTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR TCA 90 bp AACAGTAATATCTCACTGTTCACACAGTTATTTGAGAAGCAGCAGTTAGGCTGCCAGGCCCGATCCACTTaGAGGCTGGTTTACGACCTC +
Preference number: 4 (lower is better)
Translates to: NSNISLFTQLFEKQQLGCQARST*RLVYDL
Trigger: GAGGTCGTAAACCAGCCTTCAAGTGGATCGGGCCTG...GCAGCCTAACTGCTGCTTCTCAAATAACTGTGTGAACAGTGAGATATTACTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR TCA 90 bp CTTCACTACCCAAAATATCCAAGTCTAGCGCAGCAGCTTCAATTCCACCAGTTGATACAGCATGAACAGTaGGGCAGAGGGCACATACAC +
Preference number: 4 (lower is better)
Translates to: LHYPKYPSLAQQLQFHQLIQHEQ*GRGHIH
Trigger: GTGTATGTGCCCTCTGCCTCACTGTTCATGCTGTAT...CAACTGGTGGAATTGAAGCTGCTGCGCTAGACTTGGATATTTTGGGTAGTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR TCA 90 bp TCAAGCCCACAGTCAGGGTTAGCACAGTTCATTTACAGCAAGGTGTGTCATTCAAAGGTCTGTGGAATCTaGGGGTTTCTTGGGCATGAC +
Preference number: 4 (lower is better)
Translates to: SSPQSGLAQFIYSKVCHSKVCGI*GFLGHD
Trigger: GTCATGCCCAAGAAACCCTCAGATTCCACAGACCTT...TGAATGACACACCTTGCTGTAAATGAACTGTGCTAACCCTGACTGTGGGCTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR TCA 90 bp AGTGTGGATGAAAGAGAGAGGAAGGACCCGTGCTCAGGACGGGATGGTTTGCATAACATCTGTATTTCTTaGAGGATTTCCCCACTCAGA +
Preference number: 4 (lower is better)
Translates to: SVDERERKDPCSGRDGLHNICIS*RISPLR
Trigger: TCTGAGTGGGGAAATCCTTCAAGAAATACAGATGTT...ATGCAAACCATCCCGTCCTGAGCACGGGTCCTTCCTCTCTCTTTCATCCACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR TCA 90 bp AACAGTAATATCTCACTGTTCACACAGTTATTTGAGAAGCAGCAGTTAGGCTGCCCATGCAAGGGACACTaGAAGACGGCAGCTGACCTG +
Preference number: 4 (lower is better)
Translates to: NSNISLFTQLFEKQQLGCPCKGH*KTAADL
Trigger: CAGGTCAGCTGCCGTCTTTCAGTGTCCCTTGCATGG...GCAGCCTAACTGCTGCTTCTCAAATAACTGTGTGAACAGTGAGATATTACTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322886.12
CDS-3UTR TCA 90 bp AGTGTGGATGAAAGAGAGAGGAAGGACCCGTGCTCAGGACGGGATGGTTTGCATACCCCTCAGGAATTATaGATTCTGAGGTTAAATGGT +
Preference number: 4 (lower is better)
Translates to: SVDERERKDPCSGRDGLHTPQEL*ILRLNG
Trigger: ACCATTTAACCTCAGAATTCATAATTCCTGAGGGGT...ATGCAAACCATCCCGTCCTGAGCACGGGTCCTTCCTCTCTCTTTCATCCACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR GCA 90 bp CTAGCGCAGCAGCTTCAATTCCACCAGTTGTTCTGTAAGATTTATTTTCCTGACGTTTTTGGCAGGCTGTaGCGTCCATGCCAGCCATAC +
Preference number: 4 (lower is better)
Translates to: LAQQLQFHQLFCKIYFPDVFGRL*RPCQPY
Trigger: GTATGGCTGGCATGGACGGCACAGCCTGCCAAAAAC...GTCAGGAAAATAAATCTTACAGAACAACTGGTGGAATTGAAGCTGCTGCGCTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR GCA 90 bp TGTATTCATGCTAGAACAACCAACCCGTGCGCTCACCATTCTCATTTTTCAGAGCCATTCAGACCGTTCTaGATGGAGAATGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: CIHARTTNPCAHHSHFSEPFRPF*MENACR
Trigger: CCTGCAGGCATTCTCCATGCAGAACGGTCTGAATGG...CTCTGAAAAATGAGAATGGTGAGCGCACGGGTTGGTTGTTCTAGCATGAATACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR GCA 90 bp ACAGTTTCCAGAATTGTATTCATGCTAGAACAACCAACCCGTGCGCTCACCATTCCTCACCAATGGGACTaGTTCTTAACACCCCTCAGG +
Preference number: 4 (lower is better)
Translates to: TVSRIVFMLEQPTRALTIPHQWD*FLTPLR
Trigger: CCTGAGGGGTGTTAAGAAGCAGTCCCATTGGTGAGG...AATGGTGAGCGCACGGGTTGGTTGTTCTAGCATGAATACAATTCTGGAAACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CCA 90 bp AGTGTGGATGAAAGAGAGAGGAAGGACCCGTGCTCAGGACGGGATGGTTTGCATAGCATGACAAACTTCTaGCTCATAATTCTCAGAGAC +
Preference number: 4 (lower is better)
Translates to: SVDERERKDPCSGRDGLHSMTNF*LIILRD
Trigger: GTCTCTGAGAATTATGAGCCAGAAGTTTGTCATGCT...ATGCAAACCATCCCGTCCTGAGCACGGGTCCTTCCTCTCTCTTTCATCCACACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CCA 90 bp AAGTCCACAGGCCCGATCCACTTGAAGGCTGGTTTACGACCTCGCTCTTCTGTTAGCATGACAAACTTCTaGCTCATAATTCTCAGAGAC +
Preference number: 4 (lower is better)
Translates to: KSTGPIHLKAGLRPRSSVSMTNF*LIILRD
Trigger: GTCTCTGAGAATTATGAGCCAGAAGTTTGTCATGCT...AACAGAAGAGCGAGGTCGTAAACCAGCCTTCAAGTGGATCGGGCCTGTGGACTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552907.5
CDS-3UTR CCA 90 bp ACAACCAACCCGTGCGCTCACCATTCTCATTTTTCAGAGGTACCAACTAACTACGCACCACTCTCTTACTaGCAAAGGCTTTTCCCTGTG +
Preference number: 4 (lower is better)
Translates to: TTNPCAHHSHFSEVPTNYAPLSY*QRLFPV
Trigger: CACAGGGAAAAGCCTTTGCCAGTAAGAGAGTGGTGC...GTAGTTAGTTGGTACCTCTGAAAAATGAGAATGGTGAGCGCACGGGTTGGTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CCA 90 bp ACAGTTTCCAGAATTGTATTCATGCTAGAACAACCAACCCGTGCGCTCACCATTATGACAGCTCTACTGTaGCTGGGGCTTCTGAGCTTC +
Preference number: 4 (lower is better)
Translates to: TVSRIVFMLEQPTRALTIMTALL*LGLLSF
Trigger: GAAGCTCAGAAGCCCCAGCCACAGTAGAGCTGTCAT...AATGGTGAGCGCACGGGTTGGTTGTTCTAGCATGAATACAATTCTGGAAACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CCA 90 bp AACAGTAATATCTCACTGTTCACACAGTTATTTGAGAAGCAGCAGTTAGGCTGCGGGCCGACGAGAAGCTaGGCTATTGATCCAAGGCCA +
Preference number: 4 (lower is better)
Translates to: NSNISLFTQLFEKQQLGCGPTRS*AIDPRP
Trigger: TGGCCTTGGATCAATAGCCCAGCTTCTCGTCGGCCC...GCAGCCTAACTGCTGCTTCTCAAATAACTGTGTGAACAGTGAGATATTACTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322886.12
CDS-3UTR CCA 90 bp CTCTCACCACAGATTTACTCAGGGCAAGTGGAAATACATGTTAAGAATGCTTACTCCTCTGGGCCGAGCTaGTGTTTCGTGACTGGTTCC +
Preference number: 4 (lower is better)
Translates to: LSPQIYSGQVEIHVKNAYSSGPS*CFVTGS
Trigger: GGAACCAGTCACGAAACACCAGCTCGGCCCAGAGGA...GTAAGCATTCTTAACATGTATTTCCACTTGCCCTGAGTAAATCTGTGGTGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR TCA 90 bp ACAACCAACCCGTGCGCTCACCATTCTCATTTTTCAGAGGTACCAACTAACTACCAGCCACATCCAGAGTaGCAATCTTGGTTTTGGAGA +
Preference number: 4 (lower is better)
Translates to: TTNPCAHHSHFSEVPTNYQPHPE*QSWFWR
Trigger: TCTCCAAAACCAAGATTGTCACTCTGGATGTGGCTG...GTAGTTAGTTGGTACCTCTGAAAAATGAGAATGGTGAGCGCACGGGTTGGTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR TCA 90 bp AGCTTCTCTCACCACAGATTTACTCAGGGCAAGTGGAAATACATGTTAAGAATGCTTCATCACTTGAGCTaGAGTCCACAGGCCCGATCC +
Preference number: 4 (lower is better)
Translates to: SFSHHRFTQGKWKYMLRMLHHLS*SPQARS
Trigger: GGATCGGGCCTGTGGACTTCAGCTCAAGTGATGAAG...CATTCTTAACATGTATTTCCACTTGCCCTGAGTAAATCTGTGGTGAGAGAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR TCA 90 bp CTCTCACCACAGATTTACTCAGGGCAAGTGGAAATACATGTTAAGAATGCTTACAGGGTCCAAGCTGCTTaGTGGAGGCACCACTCTCTT +
Preference number: 4 (lower is better)
Translates to: LSPQIYSGQVEIHVKNAYRVQAA*WRHHSL
Trigger: AAGAGAGTGGTGCCTCCATCAAGCAGCTTGGACCCT...GTAAGCATTCTTAACATGTATTTCCACTTGCCCTGAGTAAATCTGTGGTGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR TCA 90 bp ACAGTTTCCAGAATTGTATTCATGCTAGAACAACCAACCCGTGCGCTCACCATTGGCTGCAGAAGCAAGTaGGACATCCACTTGTCCATT +
Preference number: 4 (lower is better)
Translates to: TVSRIVFMLEQPTRALTIGCRSK*DIHLSI
Trigger: AATGGACAAGTGGATGTCTCACTTGCTTCTGCAGCC...AATGGTGAGCGCACGGGTTGGTTGTTCTAGCATGAATACAATTCTGGAAACTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR TCA 90 bp CTCAAGATTGCCATTGCTTCTTCACTACCCAAAATATCCAAGTCTAGCGCAGCAGGCTGCAGAAGCAAGTaGGACATCCACTTGTCCATT +
Preference number: 4 (lower is better)
Translates to: LKIAIASSLPKISKSSAAGCRSK*DIHLSI
Trigger: AATGGACAAGTGGATGTCTCACTTGCTTCTGCAGCC...TGCTGCGCTAGACTTGGATATTTTGGGTAGTGAAGAAGCAATGGCAATCTTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR TCA 90 bp AATTTTCACATCATTACTCTTCAGAATTCAACGAAAAGGTCTCATCCAGGTTCCAGGGTTTCTTGGGCATaGCAAGCGACAGCGGGCCGT +
Preference number: 4 (lower is better)
Translates to: NFHIITLQNSTKRSHPGSRVSWA*QATAGR
Trigger: ACGGCCCGCTGTCGCTTGTCATGCCCAAGAAACCCT...GGAACCTGGATGAGACCTTTTCGTTGAATTCTGAAGAGTAATGATGTGAAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR TCA 90 bp AGCTTCTCTCACCACAGATTTACTCAGGGCAAGTGGAAATACATGTTAAGAATGGGCTGCCGGGTGTCTTaGAAAACGTCTCACGATGTG +
Preference number: 4 (lower is better)
Translates to: SFSHHRFTQGKWKYMLRMGCRVS*KTSHDV
Trigger: CACATCGTGAGACGTTTTTCAAGACACCCGGCAGCC...CATTCTTAACATGTATTTCCACTTGCCCTGAGTAAATCTGTGGTGAGAGAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR TCA 90 bp AGCTTCTCTCACCACAGATTTACTCAGGGCAAGTGGAAATACATGTTAAGAATGTCGGCGCTTTCACTGTaGCACCATGCAGAGTCGGAA +
Preference number: 4 (lower is better)
Translates to: SFSHHRFTQGKWKYMLRMSALSL*HHAESE
Trigger: TTCCGACTCTGCATGGTGTCACAGTGAAAGCGCCGA...CATTCTTAACATGTATTTCCACTTGCCCTGAGTAAATCTGTGGTGAGAGAAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR TCA 90 bp AGTGTGGATGAAAGAGAGAGGAAGGACCCGTGCTCAGGACGGGATGGTTTGCATCAGTTATTTTGGTCTTaGCATGTGTCATGTAGATAC +
Preference number: 4 (lower is better)
Translates to: SVDERERKDPCSGRDGLHQLFWS*HVSCRY
Trigger: GTATCTACATGACACATGTCAAGACCAAAATAACTG...ATGCAAACCATCCCGTCCTGAGCACGGGTCCTTCCTCTCTCTTTCATCCACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR TCA 90 bp AGTGTGGATGAAAGAGAGAGGAAGGACCCGTGCTCAGGACGGGATGGTTTGCATATACCCTGCACAGATTaGAACCTGAAAAAGGTATAT +
Preference number: 4 (lower is better)
Translates to: SVDERERKDPCSGRDGLHIPCTD*NLKKVY
Trigger: ATATACCTTTTTCAGGTTTCAATCTGTGCAGGGTAT...ATGCAAACCATCCCGTCCTGAGCACGGGTCCTTCCTCTCTCTTTCATCCACACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR GCA 90 bp CACATCATTACTCTTCAGAATTCAACGAAAAGGTCTCATCCAGGTTCCAATTTTCTGGCCAGCAAGGAGTaGTGGCTTCAGGCTCTCCAC +
Preference number: 4 (lower is better)
Translates to: HIITLQNSTKRSHPGSNFLASKE*WLQALH
Trigger: GTGGAGAGCCTGAAGCCAGCACTCCTTGCTGGCCAG...AAAATTGGAACCTGGATGAGACCTTTTCGTTGAATTCTGAAGAGTAATGATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR GCA 90 bp CTCTCACCACAGATTTACTCAGGGCAAGTGGAAATACATGTTAAGAATGCTTACAACCGGGCCCGGCATTaGAGGAGAATAGAGAACAGG +
Preference number: 4 (lower is better)
Translates to: LSPQIYSGQVEIHVKNAYNRARH*RRIENR
Trigger: CCTGTTCTCTATTCTCCTGCAATGCCGGGCCCGGTT...GTAAGCATTCTTAACATGTATTTCCACTTGCCCTGAGTAAATCTGTGGTGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322886.12
CDS-3UTR GCA 90 bp AGCTTCTCTCACCACAGATTTACTCAGGGCAAGTGGAAATACATGTTAAGAATGACGTCTCACGATGTGTaGGTTGGATGCTCTTGGGGG +
Preference number: 4 (lower is better)
Translates to: SFSHHRFTQGKWKYMLRMTSHDV*VGCSWG
Trigger: CCCCCAAGAGCATCCAACGCACACATCGTGAGACGT...CATTCTTAACATGTATTTCCACTTGCCCTGAGTAAATCTGTGGTGAGAGAAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CCA 90 bp AACAGTAATATCTCACTGTTCACACAGTTATTTGAGAAGCAGCAGTTAGGCTGCAGCTGTGGGTGTCCATaGTTCCGCTTGCTGTCTGTC +
Preference number: 4 (lower is better)
Translates to: NSNISLFTQLFEKQQLGCSCGCP*FRLLSV
Trigger: GACAGACAGCAAGCGGAACCATGGACACCCACAGCT...GCAGCCTAACTGCTGCTTCTCAAATAACTGTGTGAACAGTGAGATATTACTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CCA 90 bp CCCGATCCACTTGAAGGCTGGTTTACGACCTCGCTCTTCTGTTACATGCACTTTTGGTCTGGGGCATCTTaGCTTTCTTCTATCAGTATT +
Preference number: 4 (lower is better)
Translates to: PDPLEGWFTTSLFCYMHFWSGAS*LSSISI
Trigger: AATACTGATAGAAGAAAGCCAAGATGCCCCAGACCA...AAAGTGCATGTAACAGAAGAGCGAGGTCGTAAACCAGCCTTCAAGTGGATCGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552907.5
CDS-3UTR CCA 90 bp CCACAGATTTACTCAGGGCAAGTGGAAATACATGTTAAGAATGCTTACCCTAGTTCAGACCGTTCTGCATaGAGAATGCCTGCAGGTCCG +
Preference number: 4 (lower is better)
Translates to: PQIYSGQVEIHVKNAYPSSDRSA*RMPAGP
Trigger: CGGACCTGCAGGCATTCTCCATGCAGAACGGTCTGA...ACTAGGGTAAGCATTCTTAACATGTATTTCCACTTGCCCTGAGTAAATCTGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CCA 90 bp TTTCACATCATTACTCTTCAGAATTCAACGAAAAGGTCTCATCCAGGTTCCAATGCCAGCAAGGAGTGCTaGCTTCAGGCTCTCCACAGC +
Preference number: 4 (lower is better)
Translates to: FHIITLQNSTKRSHPGSNASKEC*LQALHS
Trigger: GCTGTGGAGAGCCTGAAGCCAGCACTCCTTGCTGGC...ATTGGAACCTGGATGAGACCTTTTCGTTGAATTCTGAAGAGTAATGATGTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CCA 90 bp CCACAGATTTACTCAGGGCAAGTGGAAATACATGTTAAGAATGCTTACCCTAGTACATACACTAGAGGCTaGCCAGCAAGGAGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: PQIYSGQVEIHVKNAYPSTYTRG*PARSAG
Trigger: GCCAGCACTCCTTGCTGGCCAGCCTCTAGTGTATGT...ACTAGGGTAAGCATTCTTAACATGTATTTCCACTTGCCCTGAGTAAATCTGTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CCA 90 bp CTAGCGCAGCAGCTTCAATTCCACCAGTTGTTCTGTAAGATTTATTTTCCTGACGGGGACTCAGGTTGTTaGACGACACTGTGTGACCTT +
Preference number: 4 (lower is better)
Translates to: LAQQLQFHQLFCKIYFPDGDSGC*TTLCDL
Trigger: AAGGTCACACAGTGTCGTCCAACAACCTGAGTCCCC...GTCAGGAAAATAAATCTTACAGAACAACTGGTGGAATTGAAGCTGCTGCGCTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322886.12
CDS-3UTR TCA 90 bp AGCTTCTCTCACCACAGATTTACTCAGGGCAAGTGGAAATACATGTTAAGAATGTGGGCTGCCTGGGGCTaGTCAGGTCTTTTAGTGTTA +
Preference number: 4 (lower is better)
Translates to: SFSHHRFTQGKWKYMLRMWAAWG*SGLLVL
Trigger: TAACACTAAAAGACCTGATCAGCCCCAGGCAGCCCA...CATTCTTAACATGTATTTCCACTTGCCCTGAGTAAATCTGTGGTGAGAGAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR TCA 90 bp CACATCATTACTCTTCAGAATTCAACGAAAAGGTCTCATCCAGGTTCCAATTTTTCACAGAGGCGCTTCTaGGCTGAGGGTGCAGATGAC +
Preference number: 4 (lower is better)
Translates to: HIITLQNSTKRSHPGSNFSQRRF*AEGADD
Trigger: GTCATCTGCACCCTCAGCTCAGAAGCGCCTCTGTGA...AAAATTGGAACCTGGATGAGACCTTTTCGTTGAATTCTGAAGAGTAATGATGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR TCA 90 bp CACAGATTTACTCAGGGCAAGTGGAAATACATGTTAAGAATGCTTACCCTAGTTGGCTGCCGGGTGTCTTaGAAAACGTCTCACGATGTG +
Preference number: 4 (lower is better)
Translates to: HRFTQGKWKYMLRMLTLVGCRVS*KTSHDV
Trigger: CACATCGTGAGACGTTTTTCAAGACACCCGGCAGCC...AACTAGGGTAAGCATTCTTAACATGTATTTCCACTTGCCCTGAGTAAATCTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR GCA 90 bp CTCTCACCACAGATTTACTCAGGGCAAGTGGAAATACATGTTAAGAATGCTTACAAATCTAGTCTGGGCTaGCTGGGGCTGATCAGGTCT +
Preference number: 4 (lower is better)
Translates to: LSPQIYSGQVEIHVKNAYKSSLG*LGLIRS
Trigger: AGACCTGATCAGCCCCAGGCAGCCCAGACTAGATTT...GTAAGCATTCTTAACATGTATTTCCACTTGCCCTGAGTAAATCTGTGGTGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR GCA 90 bp CTTCACTACCCAAAATATCCAAGTCTAGCGCAGCAGCTTCAATTCCACCAGTTGGTCCATGGTTCCGCTTaGTGTCTGTCAACAAACTTA +
Preference number: 4 (lower is better)
Translates to: LHYPKYPSLAQQLQFHQLVHGSA*CLSTNL
Trigger: TAAGTTTGTTGACAGACAGCAAGCGGAACCATGGAC...CAACTGGTGGAATTGAAGCTGCTGCGCTAGACTTGGATATTTTGGGTAGTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR GCA 90 bp CCCGATCCACTTGAAGGCTGGTTTACGACCTCGCTCTTCTGTTACATGCACTTTTTTCTGCTTGGCCTTTaGTTTTCAAATTCGTCCACA +
Preference number: 4 (lower is better)
Translates to: PDPLEGWFTTSLFCYMHFFLLGL*FSNSST
Trigger: TGTGGACGAATTTGAAAAGCAAAGGCCAAGCAGAAA...AAAGTGCATGTAACAGAAGAGCGAGGTCGTAAACCAGCCTTCAAGTGGATCGGG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000552907.5
CDS-3UTR GCA 90 bp CTCAAGATTGCCATTGCTTCTTCACTACCCAAAATATCCAAGTCTAGCGCAGCAAGCCAGCTTCTGTTTTaGACAGACTTGAATCTGGCC +
Preference number: 4 (lower is better)
Translates to: LKIAIASSLPKISKSSAASQLLF*TDLNLA
Trigger: GGCCAGATTCAAGTCTGTGCAAAACAGAAGCTGGCT...TGCTGCGCTAGACTTGGATATTTTGGGTAGTGAAGAAGCAATGGCAATCTTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CCA 90 bp AACAGTAATATCTCACTGTTCACACAGTTATTTGAGAAGCAGCAGTTAGGCTGCCCGGTCCCTTATATCTaGGCTGGCAGCACTAATGAG +
Preference number: 4 (lower is better)
Translates to: NSNISLFTQLFEKQQLGCPVPYI*AGSTNE
Trigger: CTCATTAGTGCTGCCAGCCCAGATATAAGGGACCGG...GCAGCCTAACTGCTGCTTCTCAAATAACTGTGTGAACAGTGAGATATTACTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CCA 90 bp ACAACCAACCCGTGCGCTCACCATTCTCATTTTTCAGAGGTACCAACTAACTACCGAGCTAGAAACTTCTaGCACAGGAGTCCTAAACTT +
Preference number: 4 (lower is better)
Translates to: TTNPCAHHSHFSEVPTNYRARNF*HRSPKL
Trigger: AAGTTTAGGACTCCTGTGCCAGAAGTTTCTAGCTCG...GTAGTTAGTTGGTACCTCTGAAAAATGAGAATGGTGAGCGCACGGGTTGGTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CCA 90 bp CACAGATTTACTCAGGGCAAGTGGAAATACATGTTAAGAATGCTTACCCTAGTTGTTCCTCAGGGTTTTTaGCAGGCTGTGCCGTCCATG +
Preference number: 4 (lower is better)
Translates to: HRFTQGKWKYMLRMLTLVVPQGF*QAVPSM
Trigger: CATGGACGGCACAGCCTGCCAAAAACCCTGAGGAAC...AACTAGGGTAAGCATTCTTAACATGTATTTCCACTTGCCCTGAGTAAATCTGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CCA 90 bp TGTATTCATGCTAGAACAACCAACCCGTGCGCTCACCATTCTCATTTTTCAGAGTCCTCTCCTAGTCTCTaGAGGTTCCTCAGGGTTTTT +
Preference number: 4 (lower is better)
Translates to: CIHARTTNPCAHHSHFSESSPSL*RFLRVF
Trigger: AAAAACCCTGAGGAACCTCCAGAGACTAGGAGAGGA...CTCTGAAAAATGAGAATGGTGAGCGCACGGGTTGGTTGTTCTAGCATGAATACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CCA 90 bp AGACGATTCTTGAATCAAAACCATAAGTCAGTCGGCGCTTTCACTGTGACACCATCCTCTCCTAGTCTCTaGAGGTTCCTCAGGGTTTTT +
Preference number: 4 (lower is better)
Translates to: RRFLNQNHKSVGAFTVTPSSPSL*RFLRVF
Trigger: AAAAACCCTGAGGAACCTCCAGAGACTAGGAGAGGA...TGGTGTCACAGTGAAAGCGCCGACTGACTTATGGTTTTGATTCAAGAATCGTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CCA 90 bp CTTGAAGGCTGGTTTACGACCTCGCTCTTCTGTTACATGCACTTTCTTTATCAGTCCTCTCCTAGTCTCTaGAGGTTCCTCAGGGTTTTT +
Preference number: 4 (lower is better)
Translates to: LEGWFTTSLFCYMHFLYQSSPSL*RFLRVF
Trigger: AAAAACCCTGAGGAACCTCCAGAGACTAGGAGAGGA...CTGATAAAGAAAGTGCATGTAACAGAAGAGCGAGGTCGTAAACCAGCCTTCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552907.5
CDS-3UTR CCA 90 bp CTTGAAGGCTGGTTTACGACCTCGCTCTTCTGTTACATGCACTTTCTTTATCAGAGCTGGTCAGAACATTaGCTATGTCATAGAGGCGTC +
Preference number: 4 (lower is better)
Translates to: LEGWFTTSLFCYMHFLYQSWSEH*LCHRGV
Trigger: GACGCCTCTATGACATAGCCAATGTTCTGACCAGCT...CTGATAAAGAAAGTGCATGTAACAGAAGAGCGAGGTCGTAAACCAGCCTTCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552907.5
CDS-3UTR CCA 90 bp CTCTCACCACAGATTTACTCAGGGCAAGTGGAAATACATGTTAAGAATGCTTACTTGCCTTTTAGTGGCTaGCTCATCCTCCTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: LSPQIYSGQVEIHVKNAYLPFSG*LILLLR
Trigger: CCTCAGGAGGAGGATGAGCCAGCCACTAAAAGGCAA...GTAAGCATTCTTAACATGTATTTCCACTTGCCCTGAGTAAATCTGTGGTGAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CCA 90 bp AGCTTCTCTCACCACAGATTTACTCAGGGCAAGTGGAAATACATGTTAAGAATGTTGCCTTTTAGTGGCTaGCTCATCCTCCTCCTGAGG +
Preference number: 4 (lower is better)
Translates to: SFSHHRFTQGKWKYMLRMLPFSG*LILLLR
Trigger: CCTCAGGAGGAGGATGAGCCAGCCACTAAAAGGCAA...CATTCTTAACATGTATTTCCACTTGCCCTGAGTAAATCTGTGGTGAGAGAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CCA 90 bp CACATCATTACTCTTCAGAATTCAACGAAAAGGTCTCATCCAGGTTCCAATTTTTCCTCTGGGCCGAGCTaGTGTTTCGTGACTGGTTCC +
Preference number: 4 (lower is better)
Translates to: HIITLQNSTKRSHPGSNFSSGPS*CFVTGS
Trigger: GGAACCAGTCACGAAACACCAGCTCGGCCCAGAGGA...AAAATTGGAACCTGGATGAGACCTTTTCGTTGAATTCTGAAGAGTAATGATGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CCA 90 bp TTTCACATCATTACTCTTCAGAATTCAACGAAAAGGTCTCATCCAGGTTCCAATAGTCAGCGCCGCCGCTaGGGATTTCTAGTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: FHIITLQNSTKRSHPGSNSQRRR*GFLVSS
Trigger: AGAGGAGACTAGAAATCCCCAGCGGCGGCGCTGACT...ATTGGAACCTGGATGAGACCTTTTCGTTGAATTCTGAAGAGTAATGATGTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR TCA 90 bp TTGAAGGCTGGTTTACGACCTCGCTCTTCTGTTACATGCACTTTCTTTATCAGATTTCCACACCAAGACTaGCAGCAACTTCATCTAGGG +
Preference number: 4 (lower is better)
Translates to: LKAGLRPRSSVTCTFFIRFPHQD*QQLHLG
Trigger: CCCTAGATGAAGTTGCTGTCAGTCTTGGTGTGGAAA...TCTGATAAAGAAAGTGCATGTAACAGAAGAGCGAGGTCGTAAACCAGCCTTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552907.5
CDS-3UTR TCA 90 bp CACATCATTACTCTTCAGAATTCAACGAAAAGGTCTCATCCAGGTTCCAATTTTCTTCATCACTTGAGCTaGAGTCCACAGGCCCGATCC +
Preference number: 4 (lower is better)
Translates to: HIITLQNSTKRSHPGSNFLHHLS*SPQARS
Trigger: GGATCGGGCCTGTGGACTTCAGCTCAAGTGATGAAG...AAAATTGGAACCTGGATGAGACCTTTTCGTTGAATTCTGAAGAGTAATGATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR TCA 90 bp GTGACACCATGCAGAGTCGGAACTCTAACTGGTATTAAATGCACAATTAATTACGACTTCCATACAGCATaGACAGTGAGGCAGAGGGCA +
Preference number: 4 (lower is better)
Translates to: VTPCRVGTLTGIKCTINYDFHTA*TVRQRA
Trigger: TGCCCTCTGCCTCACTGTTCATGCTGTATGGAAGTC...GTAATTAATTGTGCATTTAATACCAGTTAGAGTTCCGACTCTGCATGGTGTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR TCA 90 bp AACAGTAATATCTCACTGTTCACACAGTTATTTGAGAAGCAGCAGTTAGGCTGCAAGGTCTGTGGAATCTaGGGGTTTCTTGGGCATGAC +
Preference number: 4 (lower is better)
Translates to: NSNISLFTQLFEKQQLGCKVCGI*GFLGHD
Trigger: GTCATGCCCAAGAAACCCTCAGATTCCACAGACCTT...GCAGCCTAACTGCTGCTTCTCAAATAACTGTGTGAACAGTGAGATATTACTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR TCA 90 bp AATTTTCACATCATTACTCTTCAGAATTCAACGAAAAGGTCTCATCCAGGTTCCGAGAAGCTGGGCTATTaGTCCAAGGCCAGGCAAGCT +
Preference number: 4 (lower is better)
Translates to: NFHIITLQNSTKRSHPGSEKLGY*SKARQA
Trigger: AGCTTGCCTGGCCTTGGATCAATAGCCCAGCTTCTC...GGAACCTGGATGAGACCTTTTCGTTGAATTCTGAAGAGTAATGATGTGAAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322886.12
CDS-3UTR TCA 90 bp CTCAAGATTGCCATTGCTTCTTCACTACCCAAAATATCCAAGTCTAGCGCAGCAGTTCACACAGTTATTTaGGAAGCAGCAGTTAGGCTG +
Preference number: 4 (lower is better)
Translates to: LKIAIASSLPKISKSSAAVHTVI*EAAVRL
Trigger: CAGCCTAACTGCTGCTTCTCAAATAACTGTGTGAAC...TGCTGCGCTAGACTTGGATATTTTGGGTAGTGAAGAAGCAATGGCAATCTTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR GCA 90 bp AATTTTCACATCATTACTCTTCAGAATTCAACGAAAAGGTCTCATCCAGGTTCCACCCGGCTGACCAGATaGAGCGACTCCAGCACATTT +
Preference number: 4 (lower is better)
Translates to: NFHIITLQNSTKRSHPGSTRLTR*SDSSTF
Trigger: AAATGTGCTGGAGTCGCTGCATCTGGTCAGCCGGGT...GGAACCTGGATGAGACCTTTTCGTTGAATTCTGAAGAGTAATGATGTGAAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR GCA 90 bp TTTCACATCATTACTCTTCAGAATTCAACGAAAAGGTCTCATCCAGGTTCCAATGTTTTTGGCAGGCTGTaGCGTCCATGCCAGCCATAC +
Preference number: 4 (lower is better)
Translates to: FHIITLQNSTKRSHPGSNVFGRL*RPCQPY
Trigger: GTATGGCTGGCATGGACGGCACAGCCTGCCAAAAAC...ATTGGAACCTGGATGAGACCTTTTCGTTGAATTCTGAAGAGTAATGATGTGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR GCA 90 bp CCACAGATTTACTCAGGGCAAGTGGAAATACATGTTAAGAATGCTTACCCTAGTCTTCTCTGTACGGGCTaGTCGGTTCTGAGTTCACTT +
Preference number: 4 (lower is better)
Translates to: PQIYSGQVEIHVKNAYPSLLCTG*SVLSSL
Trigger: AAGTGAACTCAGAACCGAGCAGCCCGTACAGAGAAG...ACTAGGGTAAGCATTCTTAACATGTATTTCCACTTGCCCTGAGTAAATCTGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR GCA 90 bp CACATCATTACTCTTCAGAATTCAACGAAAAGGTCTCATCCAGGTTCCAATTTTGTTCTGCATGGAGAATaGCTGCAGGTCCGTCTGAGC +
Preference number: 4 (lower is better)
Translates to: HIITLQNSTKRSHPGSNFVLHGE*LQVRLS
Trigger: GCTCAGACGGACCTGCAGGCATTCTCCATGCAGAAC...AAAATTGGAACCTGGATGAGACCTTTTCGTTGAATTCTGAAGAGTAATGATGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR GCA 90 bp CTTGCCCTGTATCAATTTTCACATCATTACTCTTCAGAATTCAACGAAAAGGTCGACGCTGGTCCCTCCTaGAGACTTCCATACAGCATG +
Preference number: 4 (lower is better)
Translates to: LALYQFSHHYSSEFNEKVDAGPS*RLPYSM
Trigger: CATGCTGTATGGAAGTCTGCAGGAGGGACCAGCGTC...GACCTTTTCGTTGAATTCTGAAGAGTAATGATGTGAAAATTGATACAGGGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR GCA 90 bp CTTCACTACCCAAAATATCCAAGTCTAGCGCAGCAGCTTCAATTCCACCAGTTGTCATATTCCCTACTTTaGCTTTTAGTGGCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: LHYPKYPSLAQQLQFHQLSYSLL*LLVAGS
Trigger: TGAGCCAGCCACTAAAAGGCAAAGTAGGGAATATGA...CAACTGGTGGAATTGAAGCTGCTGCGCTAGACTTGGATATTTTGGGTAGTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR GCA 90 bp CACAGATTTACTCAGGGCAAGTGGAAATACATGTTAAGAATGCTTACCCTAGTTGATGTGTGCGTTGGATaGTCTTGGGGGTCACTGGAA +
Preference number: 4 (lower is better)
Translates to: HRFTQGKWKYMLRMLTLVDVCVG*SWGSLE
Trigger: TTCCAGTGACCCCCAAGAGCATCCAACGCACACATC...AACTAGGGTAAGCATTCTTAACATGTATTTCCACTTGCCCTGAGTAAATCTGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR GCA 90 bp GTGACACCATGCAGAGTCGGAACTCTAACTGGTATTAAATGCACAATTAATTACGATGTGTGCGTTGGATaGTCTTGGGGGTCACTGGAA +
Preference number: 4 (lower is better)
Translates to: VTPCRVGTLTGIKCTINYDVCVG*SWGSLE
Trigger: TTCCAGTGACCCCCAAGAGCATCCAACGCACACATC...GTAATTAATTGTGCATTTAATACCAGTTAGAGTTCCGACTCTGCATGGTGTCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR GCA 90 bp CTTGCCCTGTATCAATTTTCACATCATTACTCTTCAGAATTCAACGAAAAGGTCACGTCTCACGATGTGTaGGTTGGATGCTCTTGGGGG +
Preference number: 4 (lower is better)
Translates to: LALYQFSHHYSSEFNEKVTSHDV*VGCSWG
Trigger: CCCCCAAGAGCATCCAACGCACACATCGTGAGACGT...GACCTTTTCGTTGAATTCTGAAGAGTAATGATGTGAAAATTGATACAGGGCAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR GCA 90 bp AGACGATTCTTGAATCAAAACCATAAGTCAGTCGGCGCTTTCACTGTGACACCAAGAACAACCAACCCGTaGGCTCACCATTCTCATTTT +
Preference number: 4 (lower is better)
Translates to: RRFLNQNHKSVGAFTVTPRTTNP*AHHSHF
Trigger: AAAATGAGAATGGTGAGCGCACGGGTTGGTTGTTCT...TGGTGTCACAGTGAAAGCGCCGACTGACTTATGGTTTTGATTCAAGAATCGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR GCA 90 bp GTGACACCATGCAGAGTCGGAACTCTAACTGGTATTAAATGCACAATTAATTACCCTCACCAATGGGACTaGTTCTTAACACCCCTCAGG +
Preference number: 4 (lower is better)
Translates to: VTPCRVGTLTGIKCTINYPHQWD*FLTPLR
Trigger: CCTGAGGGGTGTTAAGAAGCAGTCCCATTGGTGAGG...GTAATTAATTGTGCATTTAATACCAGTTAGAGTTCCGACTCTGCATGGTGTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CCA 90 bp CTCAAGATTGCCATTGCTTCTTCACTACCCAAAATATCCAAGTCTAGCGCAGCACGAGCTAGAAACTTCTaGCACAGGAGTCCTAAACTT +
Preference number: 4 (lower is better)
Translates to: LKIAIASSLPKISKSSAARARNF*HRSPKL
Trigger: AAGTTTAGGACTCCTGTGCCAGAAGTTTCTAGCTCG...TGCTGCGCTAGACTTGGATATTTTGGGTAGTGAAGAAGCAATGGCAATCTTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CCA 90 bp CTTCACTACCCAAAATATCCAAGTCTAGCGCAGCAGCTTCAATTCCACCAGTTGTGGTCTGGGGCATCTTaGCTTTCTTCTATCAGTATT +
Preference number: 4 (lower is better)
Translates to: LHYPKYPSLAQQLQFHQLWSGAS*LSSISI
Trigger: AATACTGATAGAAGAAAGCCAAGATGCCCCAGACCA...CAACTGGTGGAATTGAAGCTGCTGCGCTAGACTTGGATATTTTGGGTAGTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CCA 90 bp AGAAAGGAAGCTTCTCTCACCACAGATTTACTCAGGGCAAGTGGAAATACATGTAGCTGGTCAGAACATTaGCTATGTCATAGAGGCGTC +
Preference number: 4 (lower is better)
Translates to: RKEASLTTDLLRASGNTCSWSEH*LCHRGV
Trigger: GACGCCTCTATGACATAGCCAATGTTCTGACCAGCT...ACATGTATTTCCACTTGCCCTGAGTAAATCTGTGGTGAGAGAAGCTTCCTTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CCA 90 bp ACAACCAACCCGTGCGCTCACCATTCTCATTTTTCAGAGGTACCAACTAACTACGTGTTAAAAGAACCATaGCGAGCCAGCTTCTGTTTT +
Preference number: 4 (lower is better)
Translates to: TTNPCAHHSHFSEVPTNYVLKEP*RASFCF
Trigger: AAAACAGAAGCTGGCTCGCCATGGTTCTTTTAACAC...GTAGTTAGTTGGTACCTCTGAAAAATGAGAATGGTGAGCGCACGGGTTGGTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CCA 90 bp CTTGCCCTGTATCAATTTTCACATCATTACTCTTCAGAATTCAACGAAAAGGTCTGCGTTGGATGCTCTTaGGGGTCACTGGAACTGGTG +
Preference number: 4 (lower is better)
Translates to: LALYQFSHHYSSEFNEKVCVGCS*GSLELV
Trigger: CACCAGTTCCAGTGACCCCCAAGAGCATCCAACGCA...GACCTTTTCGTTGAATTCTGAAGAGTAATGATGTGAAAATTGATACAGGGCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CCA 90 bp CTCAAGATTGCCATTGCTTCTTCACTACCCAAAATATCCAAGTCTAGCGCAGCACTGGTGTTTCGTGACTaGTTCCTTTCTCTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: LKIAIASSLPKISKSSAALVFRD*FLSLLF
Trigger: GAAGAGAAGAGAAAGGAACCAGTCACGAAACACCAG...TGCTGCGCTAGACTTGGATATTTTGGGTAGTGAAGAAGCAATGGCAATCTTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR TCA 90 bp CTTGCCCTGTATCAATTTTCACATCATTACTCTTCAGAATTCAACGAAAAGGTCCAGTTCTTCATCACTTaGGCTGAAGTCCACAGGCCC +
Preference number: 4 (lower is better)
Translates to: LALYQFSHHYSSEFNEKVQFFIT*AEVHRP
Trigger: GGGCCTGTGGACTTCAGCTCAAGTGATGAAGAACTG...GACCTTTTCGTTGAATTCTGAAGAGTAATGATGTGAAAATTGATACAGGGCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR TCA 90 bp TGTATTCATGCTAGAACAACCAACCCGTGCGCTCACCATTCTCATTTTTCAGAGATCCTCTCAGAAGCCTaGACTGTGTTAAAAGAACCA +
Preference number: 4 (lower is better)
Translates to: CIHARTTNPCAHHSHFSEILSEA*TVLKEP
Trigger: TGGTTCTTTTAACACAGTTCAGGCTTCTGAGAGGAT...CTCTGAAAAATGAGAATGGTGAGCGCACGGGTTGGTTGTTCTAGCATGAATACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR TCA 90 bp AATTTTCACATCATTACTCTTCAGAATTCAACGAAAAGGTCTCATCCAGGTTCCGACTTCCATACAGCATaGACAGTGAGGCAGAGGGCA +
Preference number: 4 (lower is better)
Translates to: NFHIITLQNSTKRSHPGSDFHTA*TVRQRA
Trigger: TGCCCTCTGCCTCACTGTTCATGCTGTATGGAAGTC...GGAACCTGGATGAGACCTTTTCGTTGAATTCTGAAGAGTAATGATGTGAAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR TCA 90 bp ACAACCAACCCGTGCGCTCACCATTCTCATTTTTCAGAGGTACCAACTAACTACAACATCTGTATTTCTTaGAGGATTTCCCCACTCAGA +
Preference number: 4 (lower is better)
Translates to: TTNPCAHHSHFSEVPTNYNICIS*RISPLR
Trigger: TCTGAGTGGGGAAATCCTTCAAGAAATACAGATGTT...GTAGTTAGTTGGTACCTCTGAAAAATGAGAATGGTGAGCGCACGGGTTGGTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR TCA 90 bp TTTCACATCATTACTCTTCAGAATTCAACGAAAAGGTCTCATCCAGGTTCCAATCAAGGCCAGGCAAGCTaGAATTCACAGGTCCTGTGT +
Preference number: 4 (lower is better)
Translates to: FHIITLQNSTKRSHPGSNQGQAS*NSQVLC
Trigger: ACACAGGACCTGTGAATTTCAGCTTGCCTGGCCTTG...ATTGGAACCTGGATGAGACCTTTTCGTTGAATTCTGAAGAGTAATGATGTGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322886.12
CDS-3UTR TCA 90 bp ACAGTTTCCAGAATTGTATTCATGCTAGAACAACCAACCCGTGCGCTCACCATTAGGAAATCAGATGATTaGTGGTGGTGGGAAGTTAAC +
Preference number: 4 (lower is better)
Translates to: TVSRIVFMLEQPTRALTIRKSDD*WWWEVN
Trigger: GTTAACTTCCCACCACCATCAATCATCTGATTTCCT...AATGGTGAGCGCACGGGTTGGTTGTTCTAGCATGAATACAATTCTGGAAACTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR TCA 90 bp ACAACCAACCCGTGCGCTCACCATTCTCATTTTTCAGAGGTACCAACTAACTACATGCAGACCTCTCCATaGAATATTTTGTGGAAGTTC +
Preference number: 4 (lower is better)
Translates to: TTNPCAHHSHFSEVPTNYMQTSP*NILWKF
Trigger: GAACTTCCACAAAATATTTCATGGAGAGGTCTGCAT...GTAGTTAGTTGGTACCTCTGAAAAATGAGAATGGTGAGCGCACGGGTTGGTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR GCA 90 bp CACATCATTACTCTTCAGAATTCAACGAAAAGGTCTCATCCAGGTTCCAATTTTCCATTCAGACCGTTCTaGATGGAGAATGCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: HIITLQNSTKRSHPGSNFPFRPF*MENACR
Trigger: CCTGCAGGCATTCTCCATGCAGAACGGTCTGAATGG...AAAATTGGAACCTGGATGAGACCTTTTCGTTGAATTCTGAAGAGTAATGATGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR GCA 90 bp CTAGCGCAGCAGCTTCAATTCCACCAGTTGTTCTGTAAGATTTATTTTCCTGACTTCACTGTGACACCATaGAGAGTCGGAACTCTAACT +
Preference number: 4 (lower is better)
Translates to: LAQQLQFHQLFCKIYFPDFTVTP*RVGTLT
Trigger: AGTTAGAGTTCCGACTCTGCATGGTGTCACAGTGAA...GTCAGGAAAATAAATCTTACAGAACAACTGGTGGAATTGAAGCTGCTGCGCTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR GCA 90 bp CTCTTCTGTTACATGCACTTTCTTTATCAGAGCCAAGCTGGTCAGAACATTGGCGAGGCGTCGTACCTTTaGTGTAGACAATTTTCATCT +
Preference number: 4 (lower is better)
Translates to: LFCYMHFLYQSQAGQNIGEASYL*CRQFSS
Trigger: AGATGAAAATTGTCTACAGCAAAGGTACGACGCCTC...GCCAATGTTCTGACCAGCTTGGCTCTGATAAAGAAAGTGCATGTAACAGAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552907.5
CDS-3UTR CCA 90 bp CTGTTACATGCACTTTCTTTATCAGAGCCAAGCTGGTCAGAACATTGGCTATGTCGAGCTAGAAACTTCTaGCACAGGAGTCCTAAACTT +
Preference number: 4 (lower is better)
Translates to: LLHALSLSEPSWSEHWLCRARNF*HRSPKL
Trigger: AAGTTTAGGACTCCTGTGCCAGAAGTTTCTAGCTCG...ACATAGCCAATGTTCTGACCAGCTTGGCTCTGATAAAGAAAGTGCATGTAACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552907.5
CDS-3UTR CCA 90 bp TGTATTCATGCTAGAACAACCAACCCGTGCGCTCACCATTCTCATTTTTCAGAGAGTAACTGTTGTTCCTaGGAATCTGGATCACCATCT +
Preference number: 4 (lower is better)
Translates to: CIHARTTNPCAHHSHFSESNCCS*ESGSPS
Trigger: AGATGGTGATCCAGATTCCCAGGAACAACAGTTACT...CTCTGAAAAATGAGAATGGTGAGCGCACGGGTTGGTTGTTCTAGCATGAATACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CCA 90 bp CTCAAGATTGCCATTGCTTCTTCACTACCCAAAATATCCAAGTCTAGCGCAGCATGGTCTGGGGCATCTTaGCTTTCTTCTATCAGTATT +
Preference number: 4 (lower is better)
Translates to: LKIAIASSLPKISKSSAAWSGAS*LSSISI
Trigger: AATACTGATAGAAGAAAGCCAAGATGCCCCAGACCA...TGCTGCGCTAGACTTGGATATTTTGGGTAGTGAAGAAGCAATGGCAATCTTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CCA 90 bp GTGACACCATGCAGAGTCGGAACTCTAACTGGTATTAAATGCACAATTAATTACGATCCACTTGAAGGCTaGTTTACGACCTCGCTCTTC +
Preference number: 4 (lower is better)
Translates to: VTPCRVGTLTGIKCTINYDPLEG*FTTSLF
Trigger: GAAGAGCGAGGTCGTAAACCAGCCTTCAAGTGGATC...GTAATTAATTGTGCATTTAATACCAGTTAGAGTTCCGACTCTGCATGGTGTCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CCA 90 bp CTCAAGATTGCCATTGCTTCTTCACTACCCAAAATATCCAAGTCTAGCGCAGCAGTGTTAAAAGAACCATaGCGAGCCAGCTTCTGTTTT +
Preference number: 4 (lower is better)
Translates to: LKIAIASSLPKISKSSAAVLKEP*RASFCF
Trigger: AAAACAGAAGCTGGCTCGCCATGGTTCTTTTAACAC...TGCTGCGCTAGACTTGGATATTTTGGGTAGTGAAGAAGCAATGGCAATCTTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CCA 90 bp CTTCACTACCCAAAATATCCAAGTCTAGCGCAGCAGCTTCAATTCCACCAGTTGAAGTTAACAGAAGTGTaGATGAAAGAGAGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: LHYPKYPSLAQQLQFHQLKLTEV*MKERGR
Trigger: CCTTCCTCTCTCTTTCATCCACACTTCTGTTAACTT...CAACTGGTGGAATTGAAGCTGCTGCGCTAGACTTGGATATTTTGGGTAGTGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR TCA 90 bp CTCGCTCTTCTGTTACATGCACTTTCTTTATCAGAGCCAAGCTGGTCAGAACATGGTAGTTTTCTCAGTTaGCAAGGGATAACTTGGATA +
Preference number: 4 (lower is better)
Translates to: LALLLHALSLSEPSWSEHGSFLS*QGITWI
Trigger: TATCCAAGTTATCCCTTGTCAACTGAGAAAACTACC...ATGTTCTGACCAGCTTGGCTCTGATAAAGAAAGTGCATGTAACAGAAGAGCGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552907.5
CDS-3UTR TCA 90 bp AGACGATTCTTGAATCAAAACCATAAGTCAGTCGGCGCTTTCACTGTGACACCATGTTTTGCACAGACTTaGATCTGGCCATATGTTTCT +
Preference number: 4 (lower is better)
Translates to: RRFLNQNHKSVGAFTVTPCFAQT*IWPYVS
Trigger: AGAAACATATGGCCAGATTCAAGTCTGTGCAAAACA...TGGTGTCACAGTGAAAGCGCCGACTGACTTATGGTTTTGATTCAAGAATCGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR TCA 90 bp ACAACCAACCCGTGCGCTCACCATTCTCATTTTTCAGAGGTACCAACTAACTACAAAGGCTTTTCCCTGTaGATTGTCTTCTATTTTCTG +
Preference number: 4 (lower is better)
Translates to: TTNPCAHHSHFSEVPTNYKGFSL*IVFYFL
Trigger: CAGAAAATAGAAGACAATTCACAGGGAAAAGCCTTT...GTAGTTAGTTGGTACCTCTGAAAAATGAGAATGGTGAGCGCACGGGTTGGTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR TCA 90 bp CTCAAGATTGCCATTGCTTCTTCACTACCCAAAATATCCAAGTCTAGCGCAGCAACTGGAACTGGTGACTaGTGTAATTTTACTACTGAG +
Preference number: 4 (lower is better)
Translates to: LKIAIASSLPKISKSSAATGTGD*CNFTTE
Trigger: CTCAGTAGTAAAATTACATCAGTCACCAGTTCCAGT...TGCTGCGCTAGACTTGGATATTTTGGGTAGTGAAGAAGCAATGGCAATCTTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322886.12
CDS-3UTR TCA 90 bp TTTCACATCATTACTCTTCAGAATTCAACGAAAAGGTCTCATCCAGGTTCCAATCGAGCTGGTGTTTCGTaGCTGGTTCCTTTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: FHIITLQNSTKRSHPGSNRAGVS*LVPFSS
Trigger: AGAAGAGAAAGGAACCAGTCACGAAACACCAGCTCG...ATTGGAACCTGGATGAGACCTTTTCGTTGAATTCTGAAGAGTAATGATGTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR TCA 90 bp CTAGCGCAGCAGCTTCAATTCCACCAGTTGTTCTGTAAGATTTATTTTCCTGACAGGAAATCAGATGATTaGTGGTGGTGGGAAGTTAAC +
Preference number: 4 (lower is better)
Translates to: LAQQLQFHQLFCKIYFPDRKSDD*WWWEVN
Trigger: GTTAACTTCCCACCACCATCAATCATCTGATTTCCT...GTCAGGAAAATAAATCTTACAGAACAACTGGTGGAATTGAAGCTGCTGCGCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR TCA 90 bp AACAGTAATATCTCACTGTTCACACAGTTATTTGAGAAGCAGCAGTTAGGCTGCGGGAACCATTTACTCTaGAGAGACAAGAGAGAGGTA +
Preference number: 4 (lower is better)
Translates to: NSNISLFTQLFEKQQLGCGNHLL*RDKREV
Trigger: TACCTCTCTCTTGTCTCTTCAGAGTAAATGGTTCCC...GCAGCCTAACTGCTGCTTCTCAAATAACTGTGTGAACAGTGAGATATTACTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR TCA 90 bp AGCTTCTCTCACCACAGATTTACTCAGGGCAAGTGGAAATACATGTTAAGAATGAGCATTCAGGAACAGTaGGGGGAAAAGCAATTTCTG +
Preference number: 4 (lower is better)
Translates to: SFSHHRFTQGKWKYMLRMSIQEQ*GEKQFL
Trigger: CAGAAATTGCTTTTCCCCTCACTGTTCCTGAATGCT...CATTCTTAACATGTATTTCCACTTGCCCTGAGTAAATCTGTGGTGAGAGAAGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR GCA 90 bp TGTATTCATGCTAGAACAACCAACCCGTGCGCTCACCATTCTCATTTTTCAGAGTTTCTGCTTGGCCTTTaGTTTTCAAATTCGTCCACA +
Preference number: 4 (lower is better)
Translates to: CIHARTTNPCAHHSHFSEFLLGL*FSNSST
Trigger: TGTGGACGAATTTGAAAAGCAAAGGCCAAGCAGAAA...CTCTGAAAAATGAGAATGGTGAGCGCACGGGTTGGTTGTTCTAGCATGAATACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR GCA 90 bp AATTTTCACATCATTACTCTTCAGAATTCAACGAAAAGGTCTCATCCAGGTTCCCTTCTCTGTACGGGCTaGTCGGTTCTGAGTTCACTT +
Preference number: 4 (lower is better)
Translates to: NFHIITLQNSTKRSHPGSLLCTG*SVLSSL
Trigger: AAGTGAACTCAGAACCGAGCAGCCCGTACAGAGAAG...GGAACCTGGATGAGACCTTTTCGTTGAATTCTGAAGAGTAATGATGTGAAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR GCA 90 bp CTAGCGCAGCAGCTTCAATTCCACCAGTTGTTCTGTAAGATTTATTTTCCTGACTCATATTCCCTACTTTaGCTTTTAGTGGCTGGCTCA +
Preference number: 4 (lower is better)
Translates to: LAQQLQFHQLFCKIYFPDSYSLL*LLVAGS
Trigger: TGAGCCAGCCACTAAAAGGCAAAGTAGGGAATATGA...GTCAGGAAAATAAATCTTACAGAACAACTGGTGGAATTGAAGCTGCTGCGCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CCA 90 bp TGTATTCATGCTAGAACAACCAACCCGTGCGCTCACCATTCTCATTTTTCAGAGAAATTTACTATGGTCTaGGGCATCTTGGCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: CIHARTTNPCAHHSHFSEKFTMV*GILAFF
Trigger: GAAGAAAGCCAAGATGCCCCAGACCATAGTAAATTT...CTCTGAAAAATGAGAATGGTGAGCGCACGGGTTGGTTGTTCTAGCATGAATACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CCA 90 bp CTCAAGATTGCCATTGCTTCTTCACTACCCAAAATATCCAAGTCTAGCGCAGCAAAATTTACTATGGTCTaGGGCATCTTGGCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: LKIAIASSLPKISKSSAAKFTMV*GILAFF
Trigger: GAAGAAAGCCAAGATGCCCCAGACCATAGTAAATTT...TGCTGCGCTAGACTTGGATATTTTGGGTAGTGAAGAAGCAATGGCAATCTTGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CCA 90 bp CTTGAAGGCTGGTTTACGACCTCGCTCTTCTGTTACATGCACTTTCTTTATCAGAAATTTACTATGGTCTaGGGCATCTTGGCTTTCTTC +
Preference number: 4 (lower is better)
Translates to: LEGWFTTSLFCYMHFLYQKFTMV*GILAFF
Trigger: GAAGAAAGCCAAGATGCCCCAGACCATAGTAAATTT...CTGATAAAGAAAGTGCATGTAACAGAAGAGCGAGGTCGTAAACCAGCCTTCAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552907.5
CDS-3UTR CCA 90 bp CTAGCGCAGCAGCTTCAATTCCACCAGTTGTTCTGTAAGATTTATTTTCCTGACTTATCAGAGCCAAGCTaGTCAGAACATTGGCTATGT +
Preference number: 4 (lower is better)
Translates to: LAQQLQFHQLFCKIYFPDLSEPS*SEHWLC
Trigger: ACATAGCCAATGTTCTGACCAGCTTGGCTCTGATAA...GTCAGGAAAATAAATCTTACAGAACAACTGGTGGAATTGAAGCTGCTGCGCTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CCA 90 bp AATTTTCACATCATTACTCTTCAGAATTCAACGAAAAGGTCTCATCCAGGTTCCGATCCACTTGAAGGCTaGTTTACGACCTCGCTCTTC +
Preference number: 4 (lower is better)
Translates to: NFHIITLQNSTKRSHPGSDPLEG*FTTSLF
Trigger: GAAGAGCGAGGTCGTAAACCAGCCTTCAAGTGGATC...GGAACCTGGATGAGACCTTTTCGTTGAATTCTGAAGAGTAATGATGTGAAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CCA 90 bp CTTGCCCTGTATCAATTTTCACATCATTACTCTTCAGAATTCAACGAAAAGGTCGCACCACTCTCTTACTaGCAAAGGCTTTTCCCTGTG +
Preference number: 4 (lower is better)
Translates to: LALYQFSHHYSSEFNEKVAPLSY*QRLFPV
Trigger: CACAGGGAAAAGCCTTTGCCAGTAAGAGAGTGGTGC...GACCTTTTCGTTGAATTCTGAAGAGTAATGATGTGAAAATTGATACAGGGCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CCA 90 bp AGCTTCTCTCACCACAGATTTACTCAGGGCAAGTGGAAATACATGTTAAGAATGCTGGTGTTTCGTGACTaGTTCCTTTCTCTTCTCTTC +
Preference number: 4 (lower is better)
Translates to: SFSHHRFTQGKWKYMLRMLVFRD*FLSLLF
Trigger: GAAGAGAAGAGAAAGGAACCAGTCACGAAACACCAG...CATTCTTAACATGTATTTCCACTTGCCCTGAGTAAATCTGTGGTGAGAGAAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CCA 90 bp CACATCATTACTCTTCAGAATTCAACGAAAAGGTCTCATCCAGGTTCCAATTTTATTTCTAGTCTCCTCTaGGCCGAGCTGGTGTTTCGT +
Preference number: 4 (lower is better)
Translates to: HIITLQNSTKRSHPGSNFISSLL*AELVFR
Trigger: ACGAAACACCAGCTCGGCCCAGAGGAGACTAGAAAT...AAAATTGGAACCTGGATGAGACCTTTTCGTTGAATTCTGAAGAGTAATGATGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CCA 90 bp AGGCTGGTTTACGACCTCGCTCTTCTGTTACATGCACTTTCTTTATCAGAGCCACTTTTAAATTTACTATaGTCTGGGGCATCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: RLVYDLALLLHALSLSEPLLNLL*SGASWL
Trigger: AAGCCAAGATGCCCCAGACCATAGTAAATTTAAAAG...TGGCTCTGATAAAGAAAGTGCATGTAACAGAAGAGCGAGGTCGTAAACCAGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552907.5
CDS-3UTR TCA 90 bp CACATCATTACTCTTCAGAATTCAACGAAAAGGTCTCATCCAGGTTCCAATTTTTTTCCACACCAAGACTaGCAGCAACTTCATCTAGGG +
Preference number: 4 (lower is better)
Translates to: HIITLQNSTKRSHPGSNFFPHQD*QQLHLG
Trigger: CCCTAGATGAAGTTGCTGTCAGTCTTGGTGTGGAAA...AAAATTGGAACCTGGATGAGACCTTTTCGTTGAATTCTGAAGAGTAATGATGTG
41% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR TCA 90 bp AGACGATTCTTGAATCAAAACCATAAGTCAGTCGGCGCTTTCACTGTGACACCAAAAGGCTTTTCCCTGTaGATTGTCTTCTATTTTCTG +
Preference number: 4 (lower is better)
Translates to: RRFLNQNHKSVGAFTVTPKGFSL*IVFYFL
Trigger: CAGAAAATAGAAGACAATTCACAGGGAAAAGCCTTT...TGGTGTCACAGTGAAAGCGCCGACTGACTTATGGTTTTGATTCAAGAATCGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR TCA 90 bp AGAAAGGAAGCTTCTCTCACCACAGATTTACTCAGGGCAAGTGGAAATACATGTACCCCTCAGGAATTATaGATTCTGAGGTTAAATGGT +
Preference number: 4 (lower is better)
Translates to: RKEASLTTDLLRASGNTCTPQEL*ILRLNG
Trigger: ACCATTTAACCTCAGAATTCATAATTCCTGAGGGGT...ACATGTATTTCCACTTGCCCTGAGTAAATCTGTGGTGAGAGAAGCTTCCTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR GCA 90 bp CTTGCCCTGTATCAATTTTCACATCATTACTCTTCAGAATTCAACGAAAAGGTCAGCCAGCTTCTGTTTTaGACAGACTTGAATCTGGCC +
Preference number: 4 (lower is better)
Translates to: LALYQFSHHYSSEFNEKVSQLLF*TDLNLA
Trigger: GGCCAGATTCAAGTCTGTGCAAAACAGAAGCTGGCT...GACCTTTTCGTTGAATTCTGAAGAGTAATGATGTGAAAATTGATACAGGGCAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR GCA 90 bp CTCTCACCACAGATTTACTCAGGGCAAGTGGAAATACATGTTAAGAATGCTTACTTTGAGGGGTATAGATaGCCTGTTACCCATAGTCTT +
Preference number: 4 (lower is better)
Translates to: LSPQIYSGQVEIHVKNAYFEGYR*PVTHSL
Trigger: AAGACTATGGGTAACAGGGCATCTATACCCCTCAAA...GTAAGCATTCTTAACATGTATTTCCACTTGCCCTGAGTAAATCTGTGGTGAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CCA 90 bp CTCTCACCACAGATTTACTCAGGGCAAGTGGAAATACATGTTAAGAATGCTTACCGTCCTTGTTTTCAATaGGTCGGAATAGTCCCTTTT +
Preference number: 4 (lower is better)
Translates to: LSPQIYSGQVEIHVKNAYRPCFQ*VGIVPF
Trigger: AAAAGGGACTATTCCGACCCATTGAAAACAAGGACG...GTAAGCATTCTTAACATGTATTTCCACTTGCCCTGAGTAAATCTGTGGTGAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CCA 90 bp TTTCACATCATTACTCTTCAGAATTCAACGAAAAGGTCTCATCCAGGTTCCAATAGCTGGTCAGAACATTaGCTATGTCATAGAGGCGTC +
Preference number: 4 (lower is better)
Translates to: FHIITLQNSTKRSHPGSNSWSEH*LCHRGV
Trigger: GACGCCTCTATGACATAGCCAATGTTCTGACCAGCT...ATTGGAACCTGGATGAGACCTTTTCGTTGAATTCTGAAGAGTAATGATGTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CCA 90 bp CTCTCACCACAGATTTACTCAGGGCAAGTGGAAATACATGTTAAGAATGCTTACTTATCAGAGCCAAGCTaGTCAGAACATTGGCTATGT +
Preference number: 4 (lower is better)
Translates to: LSPQIYSGQVEIHVKNAYLSEPS*SEHWLC
Trigger: ACATAGCCAATGTTCTGACCAGCTTGGCTCTGATAA...GTAAGCATTCTTAACATGTATTTCCACTTGCCCTGAGTAAATCTGTGGTGAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CCA 90 bp AGTTTGAATACCCTTGGATATGAAACATATGTCCATTTTCCCTCTTACTCTTCTATTTCTAGTCTCCTCTaGGCCGAGCTGGTGTTTCGT +
Preference number: 4 (lower is better)
Translates to: SLNTLGYETYVHFPSYSSISSLL*AELVFR
Trigger: ACGAAACACCAGCTCGGCCCAGAGGAGACTAGAAAT...AGAAGAGTAAGAGGGAAAATGGACATATGTTTCATATCCAAGGGTATTCAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR TCA 90 bp CCACAGATTTACTCAGGGCAAGTGGAAATACATGTTAAGAATGCTTACCCTAGTTGTTTTGCACAGACTTaGATCTGGCCATATGTTTCT +
Preference number: 4 (lower is better)
Translates to: PQIYSGQVEIHVKNAYPSCFAQT*IWPYVS
Trigger: AGAAACATATGGCCAGATTCAAGTCTGTGCAAAACA...ACTAGGGTAAGCATTCTTAACATGTATTTCCACTTGCCCTGAGTAAATCTGTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR TCA 90 bp GTGACACCATGCAGAGTCGGAACTCTAACTGGTATTAAATGCACAATTAATTACAGTTGGCCATTCACATaGATGTCTTTGAGGGGTATA +
Preference number: 4 (lower is better)
Translates to: VTPCRVGTLTGIKCTINYSWPFT*MSLRGI
Trigger: TATACCCCTCAAAGACATTCATGTGAATGGCCAACT...GTAATTAATTGTGCATTTAATACCAGTTAGAGTTCCGACTCTGCATGGTGTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR GCA 90 bp AGTTTGAATACCCTTGGATATGAAACATATGTCCATTTTCCCTCTTACTCTTCTATTTACCTCCATCCCTaGTTTCCTAAGGAGGCTTCC +
Preference number: 4 (lower is better)
Translates to: SLNTLGYETYVHFPSYSSIYLHP*FPKEAS
Trigger: GGAAGCCTCCTTAGGAAAGCAGGGATGGAGGTAAAT...AGAAGAGTAAGAGGGAAAATGGACATATGTTTCATATCCAAGGGTATTCAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR GCA 90 bp AATTTTCACATCATTACTCTTCAGAATTCAACGAAAAGGTCTCATCCAGGTTCCTTCACTGTGACACCATaGAGAGTCGGAACTCTAACT +
Preference number: 4 (lower is better)
Translates to: NFHIITLQNSTKRSHPGSFTVTP*RVGTLT
Trigger: AGTTAGAGTTCCGACTCTGCATGGTGTCACAGTGAA...GGAACCTGGATGAGACCTTTTCGTTGAATTCTGAAGAGTAATGATGTGAAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR GCA 90 bp AATTTTCACATCATTACTCTTCAGAATTCAACGAAAAGGTCTCATCCAGGTTCCAGAACAACCAACCCGTaGGCTCACCATTCTCATTTT +
Preference number: 4 (lower is better)
Translates to: NFHIITLQNSTKRSHPGSRTTNP*AHHSHF
Trigger: AAAATGAGAATGGTGAGCGCACGGGTTGGTTGTTCT...GGAACCTGGATGAGACCTTTTCGTTGAATTCTGAAGAGTAATGATGTGAAAATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR GCA 90 bp CTCAAGATTGCCATTGCTTCTTCACTACCCAAAATATCCAAGTCTAGCGCAGCAATGGTAGAATTAACATaGATATACCCTGCACAGATT +
Preference number: 4 (lower is better)
Translates to: LKIAIASSLPKISKSSAAMVELT*IYPAQI
Trigger: AATCTGTGCAGGGTATATGCATGTTAATTCTACCAT...TGCTGCGCTAGACTTGGATATTTTGGGTAGTGAAGAAGCAATGGCAATCTTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR GCA 90 bp AACAGTAATATCTCACTGTTCACACAGTTATTTGAGAAGCAGCAGTTAGGCTGCCTGTTTCCGTCTAAATaGAGACCTCTCCATGAAATA +
Preference number: 4 (lower is better)
Translates to: NSNISLFTQLFEKQQLGCLFPSK*RPLHEI
Trigger: TATTTCATGGAGAGGTCTGCATTTAGACGGAAACAG...GCAGCCTAACTGCTGCTTCTCAAATAACTGTGTGAACAGTGAGATATTACTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CCA 90 bp AACAGTAATATCTCACTGTTCACACAGTTATTTGAGAAGCAGCAGTTAGGCTGCAAGTTAACAGAAGTGTaGATGAAAGAGAGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: NSNISLFTQLFEKQQLGCKLTEV*MKERGR
Trigger: CCTTCCTCTCTCTTTCATCCACACTTCTGTTAACTT...GCAGCCTAACTGCTGCTTCTCAAATAACTGTGTGAACAGTGAGATATTACTGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CCA 90 bp CTCTCACCACAGATTTACTCAGGGCAAGTGGAAATACATGTTAAGAATGCTTACAGAACTAGTATAGTTTaGCGACTTAATGCACCCCTA +
Preference number: 4 (lower is better)
Translates to: LSPQIYSGQVEIHVKNAYRTSIV*RLNAPL
Trigger: TAGGGGTGCATTAAGTCGCCAAACTATACTAGTTCT...GTAAGCATTCTTAACATGTATTTCCACTTGCCCTGAGTAAATCTGTGGTGAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
3UTR CAA 72 bp AGCCTATTCAGATCTACTTCCAGAATAAGACGATTCTaGAATCAAAACCATAAGTCAGTCGGCGCTTTCACT +
Preference number: 4 (lower is better)
Translates to: SLFRSTSRIRRF*NQNHKSVGAFT
Trigger: AGTGAAAGCGCCGACTGACTTATGGTTTTGATTCAAGAATCGTCTTATTCTGGAAGTAGATCTGAATAGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR TCA 90 bp TTTCACATCATTACTCTTCAGAATTCAACGAAAAGGTCTCATCCAGGTTCCAATCTTCGGGGCCATCCTTaGTCGATCAACAAATATATT +
Preference number: 4 (lower is better)
Translates to: FHIITLQNSTKRSHPGSNLRGHP*SINKYI
Trigger: AATATATTTGTTGATCGATCAAGGATGGCCCCGAAG...ATTGGAACCTGGATGAGACCTTTTCGTTGAATTCTGAAGAGTAATGATGTGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR TCA 90 bp CACATCATTACTCTTCAGAATTCAACGAAAAGGTCTCATCCAGGTTCCAATTTTAGTTGGCCATTCACATaGATGTCTTTGAGGGGTATA +
Preference number: 4 (lower is better)
Translates to: HIITLQNSTKRSHPGSNFSWPFT*MSLRGI
Trigger: TATACCCCTCAAAGACATTCATGTGAATGGCCAACT...AAAATTGGAACCTGGATGAGACCTTTTCGTTGAATTCTGAAGAGTAATGATGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR TCA 90 bp CCACAGATTTACTCAGGGCAAGTGGAAATACATGTTAAGAATGCTTACCCTAGTATACCCTGCACAGATTaGAACCTGAAAAAGGTATAT +
Preference number: 4 (lower is better)
Translates to: PQIYSGQVEIHVKNAYPSIPCTD*NLKKVY
Trigger: ATATACCTTTTTCAGGTTTCAATCTGTGCAGGGTAT...ACTAGGGTAAGCATTCTTAACATGTATTTCCACTTGCCCTGAGTAAATCTGTGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR TCA 90 bp CACAGATTTACTCAGGGCAAGTGGAAATACATGTTAAGAATGCTTACCCTAGTTATGCAGACCTCTCCATaGAATATTTTGTGGAAGTTC +
Preference number: 4 (lower is better)
Translates to: HRFTQGKWKYMLRMLTLVMQTSP*NILWKF
Trigger: GAACTTCCACAAAATATTTCATGGAGAGGTCTGCAT...AACTAGGGTAAGCATTCTTAACATGTATTTCCACTTGCCCTGAGTAAATCTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR GCA 90 bp AATTTTCACATCATTACTCTTCAGAATTCAACGAAAAGGTCTCATCCAGGTTCCAATCCTGCAGGAGACTaGACACAAAGATATTGTAGC +
Preference number: 4 (lower is better)
Translates to: NFHIITLQNSTKRSHPGSNPAGD*TQRYCS
Trigger: GCTACAATATCTTTGTGTGCAGTCTCCTGCAGGATT...GGAACCTGGATGAGACCTTTTCGTTGAATTCTGAAGAGTAATGATGTGAAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322886.12
CDS-3UTR CCA 90 bp AACAGTAATATCTCACTGTTCACACAGTTATTTGAGAAGCAGCAGTTAGGCTGCGTTTTAAATTTACTATaGTCTGGGGCATCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: NSNISLFTQLFEKQQLGCVLNLL*SGASWL
Trigger: AAGCCAAGATGCCCCAGACCATAGTAAATTTAAAAC...GCAGCCTAACTGCTGCTTCTCAAATAACTGTGTGAACAGTGAGATATTACTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CCA 90 bp AGCTTCTCTCACCACAGATTTACTCAGGGCAAGTGGAAATACATGTTAAGAATGACAGAAAATACTGGGTaGGCTAAAGGATTAACACAA +
Preference number: 4 (lower is better)
Translates to: SFSHHRFTQGKWKYMLRMTENTG*AKGLTQ
Trigger: TTGTGTTAATCCTTTAGCCCACCCAGTATTTTCTGT...CATTCTTAACATGTATTTCCACTTGCCCTGAGTAAATCTGTGGTGAGAGAAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR GCA 90 bp AATTTTCACATCATTACTCTTCAGAATTCAACGAAAAGGTCTCATCCAGGTTCCTTTCTGCTTGGCCTTTaGTTTTCAAATTCGTCCACA +
Preference number: 4 (lower is better)
Translates to: NFHIITLQNSTKRSHPGSFLLGL*FSNSST
Trigger: TGTGGACGAATTTGAAAAGCAAAGGCCAAGCAGAAA...GGAACCTGGATGAGACCTTTTCGTTGAATTCTGAAGAGTAATGATGTGAAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR GCA 90 bp CACATCATTACTCTTCAGAATTCAACGAAAAGGTCTCATCCAGGTTCCAATTTTCTGTTTCCGTCTAAATaGAGACCTCTCCATGAAATA +
Preference number: 4 (lower is better)
Translates to: HIITLQNSTKRSHPGSNFLFPSK*RPLHEI
Trigger: TATTTCATGGAGAGGTCTGCATTTAGACGGAAACAG...AAAATTGGAACCTGGATGAGACCTTTTCGTTGAATTCTGAAGAGTAATGATGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CCA 90 bp AGTTTGAATACCCTTGGATATGAAACATATGTCCATTTTCCCTCTTACTCTTCTAGTAACTGTTGTTCCTaGGAATCTGGATCACCATCT +
Preference number: 4 (lower is better)
Translates to: SLNTLGYETYVHFPSYSSSNCCS*ESGSPS
Trigger: AGATGGTGATCCAGATTCCCAGGAACAACAGTTACT...AGAAGAGTAAGAGGGAAAATGGACATATGTTTCATATCCAAGGGTATTCAAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR TCA 90 bp AGTTTGAATACCCTTGGATATGAAACATATGTCCATTTTCCCTCTTACTCTTCTGGTAGTTTTCTCAGTTaGCAAGGGATAACTTGGATA +
Preference number: 4 (lower is better)
Translates to: SLNTLGYETYVHFPSYSSGSFLS*QGITWI
Trigger: TATCCAAGTTATCCCTTGTCAACTGAGAAAACTACC...AGAAGAGTAAGAGGGAAAATGGACATATGTTTCATATCCAAGGGTATTCAAACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR TCA 90 bp CTTGCCCTGTATCAATTTTCACATCATTACTCTTCAGAATTCAACGAAAAGGTCGAATACCCTTGGATATaGAACATATGTCCATTTTCC +
Preference number: 4 (lower is better)
Translates to: LALYQFSHHYSSEFNEKVEYPWI*NICPFS
Trigger: GGAAAATGGACATATGTTTCATATCCAAGGGTATTC...GACCTTTTCGTTGAATTCTGAAGAGTAATGATGTGAAAATTGATACAGGGCAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CCA 90 bp CACATCATTACTCTTCAGAATTCAACGAAAAGGTCTCATCCAGGTTCCAATTTTGTTTTAAATTTACTATaGTCTGGGGCATCTTGGCTT +
Preference number: 4 (lower is better)
Translates to: HIITLQNSTKRSHPGSNFVLNLL*SGASWL
Trigger: AAGCCAAGATGCCCCAGACCATAGTAAATTTAAAAC...AAAATTGGAACCTGGATGAGACCTTTTCGTTGAATTCTGAAGAGTAATGATGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CCA 90 bp GTGACACCATGCAGAGTCGGAACTCTAACTGGTATTAAATGCACAATTAATTACTTTACTCAGGGCAAGTaGAAATACATGTTAAGAATG +
Preference number: 4 (lower is better)
Translates to: VTPCRVGTLTGIKCTINYFTQGK*KYMLRM
Trigger: CATTCTTAACATGTATTTCCACTTGCCCTGAGTAAA...GTAATTAATTGTGCATTTAATACCAGTTAGAGTTCCGACTCTGCATGGTGTCAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CCA 90 bp AGTTTGAATACCCTTGGATATGAAACATATGTCCATTTTCCCTCTTACTCTTCTAGAACTAGTATAGTTTaGCGACTTAATGCACCCCTA +
Preference number: 4 (lower is better)
Translates to: SLNTLGYETYVHFPSYSSRTSIV*RLNAPL
Trigger: TAGGGGTGCATTAAGTCGCCAAACTATACTAGTTCT...AGAAGAGTAAGAGGGAAAATGGACATATGTTTCATATCCAAGGGTATTCAAACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR TCA 90 bp AGTTTGAATACCCTTGGATATGAAACATATGTCCATTTTCCCTCTTACTCTTCTGAATACCCTTGGATATaGAACATATGTCCATTTTCC +
Preference number: 4 (lower is better)
Translates to: SLNTLGYETYVHFPSYSSEYPWI*NICPFS
Trigger: GGAAAATGGACATATGTTTCATATCCAAGGGTATTC...AGAAGAGTAAGAGGGAAAATGGACATATGTTTCATATCCAAGGGTATTCAAACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR GCA 90 bp CACATCATTACTCTTCAGAATTCAACGAAAAGGTCTCATCCAGGTTCCAATTTTATGGTAGAATTAACATaGATATACCCTGCACAGATT +
Preference number: 4 (lower is better)
Translates to: HIITLQNSTKRSHPGSNFMVELT*IYPAQI
Trigger: AATCTGTGCAGGGTATATGCATGTTAATTCTACCAT...AAAATTGGAACCTGGATGAGACCTTTTCGTTGAATTCTGAAGAGTAATGATGTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS TCA 90 bp AGGAGGCTTCCTGCCTCTGCAGGGACCTCCACGGACCCAAGCCGATaGGGGAAGGTGGTGCGGCGATCAGCAGCCGGGCGGCGGCATCGG +
Preference number: 5 (lower is better)
Translates to: RRLPASAGTSTDPSR*GKVVRRSAAGRRHR
Trigger: CCGATGCCGCCGCCCGGCTGCTGATCGCCGCACCACCTTCCCTCATCGGCTTGGGTCCGTGGAGGTCCCTGCAGAGGCAGGAAGCCTCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322886.12
ENST00000416496.6
ENST00000547316.1
ENST00000550669.5
ENST00000551558.1
CDS GCA 90 bp CCTCTGCAGGGACCTCCACGGACCCAAGCCGATGAGGGAAGGTGGTaGGGCGATCAGCAGCCGGGCGGCGGCATCGGGAAGGGAGAGCGA +
Preference number: 5 (lower is better)
Translates to: PLQGPPRTQADEGRW*GDQQPGGGIGKGER
Trigger: TCGCTCTCCCTTCCCGATGCCGCCGCCCGGCTGCTGATCGCCGCACCACCTTCCCTCATCGGCTTGGGTCCGTGGAGGTCCCTGCAGAGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322886.12
ENST00000416496.6
ENST00000547316.1
ENST00000550669.5
ENST00000551558.1
CDS CCA 90 bp CTGCCTCTGCAGGGACCTCCACGGACCCAAGCCGATGAGGGAAGGTaGTGCGGCGATCAGCAGCCGGGCGGCGGCATCGGGAAGGGAGAG +
Preference number: 5 (lower is better)
Translates to: LPLQGPPRTQADEGR*CGDQQPGGGIGKGE
Trigger: CTCTCCCTTCCCGATGCCGCCGCCCGGCTGCTGATCGCCGCACCACCTTCCCTCATCGGCTTGGGTCCGTGGAGGTCCCTGCAGAGGCAG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322886.12
ENST00000416496.6
ENST00000547316.1
ENST00000550669.5
ENST00000551558.1
CDS-3UTR CAA 90 bp CCGTGCTCAGGACGGGATGGTTTGCATCCCGCCTCGGACATCCGGGACTCTCAGTCAGGACGGGATGGTTaGCATCCCGCCTCGGACATC +
Preference number: 5 (lower is better)
Translates to: PCSGRDGLHPASDIRDSQSGRDG*HPASDI
Trigger: GATGTCCGAGGCGGGATGCAAACCATCCCGTCCTGA...CTGAGAGTCCCGGATGTCCGAGGCGGGATGCAAACCATCCCGTCCTGAGCACGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CAA 90 bp ATGGTTTGCATCCCGCCTCGGACATCCGGGACTCTCAGGGCGTTTGATCCCACCGTGCGTTGGATGCTCTaGGGGGTCACTGGAACTGGT +
Preference number: 5 (lower is better)
Translates to: MVCIPPRTSGTLRAFDPTVRWML*GVTGTG
Trigger: ACCAGTTCCAGTGACCCCCAAGAGCATCCAACGCAC...GGTGGGATCAAACGCCCTGAGAGTCCCGGATGTCCGAGGCGGGATGCAAACCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS GCA 90 bp ACAATTTACCTCCATCCCTGCTTTCCTAAGGAGGCTTCCTGCCTCTaGAGGGACCTCCACGGACCCAAGCCGATGAGGGAAGGTGGTGCG +
Preference number: 5 (lower is better)
Translates to: TIYLHPCFPKEASCL*RDLHGPKPMREGGA
Trigger: CGCACCACCTTCCCTCATCGGCTTGGGTCCGTGGAGGTCCCTGCAGAGGCAGGAAGCCTCCTTAGGAAAGCAGGGATGGAGGTAAATTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322886.12
ENST00000416496.6
ENST00000550669.5
ENST00000551558.1
CDS CCA 90 bp CACAGAGGCGCTTCTGAGCTGAGGGTGCAGATGACAGCTCTACTGTaGCTGGGGCTTCTGAGCTTCTGTCATCCCTCTCTGACCCTGACC +
Preference number: 5 (lower is better)
Translates to: HRGASELRVQMTALL*LGLLSFCHPSLTLT
Trigger: GGTCAGGGTCAGAGAGGGATGACAGAAGCTCAGAAGCCCCAGCCACAGTAGAGCTGTCATCTGCACCCTCAGCTCAGAAGCGCCTCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322886.12
ENST00000416496.6
ENST00000550669.5
CDS-3UTR CAA 90 bp AGTGTGGATGAAAGAGAGAGGAAGGACCCGTGCTCAGGACGGGATGGTTTGCATGGACTCTCAGGGCGTTaGATCCCACCCCCACCTGGC +
Preference number: 5 (lower is better)
Translates to: SVDERERKDPCSGRDGLHGLSGR*IPPPPG
Trigger: GCCAGGTGGGGGTGGGATCAAACGCCCTGAGAGTCC...ATGCAAACCATCCCGTCCTGAGCACGGGTCCTTCCTCTCTCTTTCATCCACACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS TCA 90 bp TTCCTCAGGGTTTTTGGCAGGCTGTGCCGTCCATGCCAGCCATACTaGTTCTTAGCCACCCGGCTGACCAGATGCAGCGACTCCAGCACA +
Preference number: 5 (lower is better)
Translates to: FLRVFGRLCRPCQPY*FLATRLTRCSDSST
Trigger: TGTGCTGGAGTCGCTGCATCTGGTCAGCCGGGTGGCTAAGAATCAGTATGGCTGGCATGGACGGCACAGCCTGCCAAAAACCCTGAGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322886.12
ENST00000416496.6
ENST00000550669.5
ENST00000551058.1
ENST00000551558.1
ENST00000552907.5
CDS TCA 90 bp ACCCTGACCCTGACGCTGGTCCCTCCTGCAGACTTCCATACAGCATaGACAGTGAGGCAGAGGGCACATACACTAGAGGCTGGCCAGCAA +
Preference number: 5 (lower is better)
Translates to: TLTLTLVPPADFHTA*TVRQRAHTLEAGQQ
Trigger: TTGCTGGCCAGCCTCTAGTGTATGTGCCCTCTGCCTCACTGTTCATGCTGTATGGAAGTCTGCAGGAGGGACCAGCGTCAGGGTCAGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322886.12
ENST00000416496.6
ENST00000550669.5
CDS CCA 90 bp CCAAGGCTGCCGGGTGTCTTGAAAAACGTCTCACGATGTGTGCGTTaGATGCTCTTGGGGGTCACTGGAACTGGTGACTGCAGGAGACTG +
Preference number: 5 (lower is better)
Translates to: PRLPGVLKNVSRCVR*MLLGVTGTGDCRRL
Trigger: CAGTCTCCTGCAGTCACCAGTTCCAGTGACCCCCAAGAGCATCCAACGCACACATCGTGAGACGTTTTTCAAGACACCCGGCAGCCTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000416496.6
CDS-3UTR CAA 90 bp CCGTGCTCAGGACGGGATGGTTTGCATCCCGCCTCGGACATCCGGGACTCTCAGTTCATATTCCCTACTTaGCCTTTTAGTGGCTGGCTC +
Preference number: 5 (lower is better)
Translates to: PCSGRDGLHPASDIRDSQFIFPT*PFSGWL
Trigger: GAGCCAGCCACTAAAAGGCAAAGTAGGGAATATGAA...CTGAGAGTCCCGGATGTCCGAGGCGGGATGCAAACCATCCCGTCCTGAGCACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CAA 90 bp TGCTCAGGACGGGATGGTTTGCATCCCGCCTCGGACATCCGGGACTCTCAGGGCTCTTCGGGGCCATCCTaGATCGATCAACAAATATAT +
Preference number: 5 (lower is better)
Translates to: CSGRDGLHPASDIRDSQGSSGPS*IDQQIY
Trigger: ATATATTTGTTGATCGATCAAGGATGGCCCCGAAGA...GCCCTGAGAGTCCCGGATGTCCGAGGCGGGATGCAAACCATCCCGTCCTGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CAA 90 bp TGCTCAGGACGGGATGGTTTGCATCCCGCCTCGGACATCCGGGACTCTCAGGGCTTGACAAGGGATAACTaGGATAGCGAGCTAGAAACT +
Preference number: 5 (lower is better)
Translates to: CSGRDGLHPASDIRDSQGLTRDN*DSELET
Trigger: AGTTTCTAGCTCGCTATCCAAGTTATCCCTTGTCAA...GCCCTGAGAGTCCCGGATGTCCGAGGCGGGATGCAAACCATCCCGTCCTGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CAA 90 bp GGCCCGATCCACTTGAAGGCTGGTTTACGACCTCGCTCTTCTGTTACATGCACTGGTTCCTCAGGGTTTTaGGCAGGCTGTGCCGTCCAT +
Preference number: 5 (lower is better)
Translates to: GPIHLKAGLRPRSSVTCTGSSGF*AGCAVH
Trigger: ATGGACGGCACAGCCTGCCAAAAACCCTGAGGAACC...AGTGCATGTAACAGAAGAGCGAGGTCGTAAACCAGCCTTCAAGTGGATCGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552907.5
CDS CCA 90 bp GTGGACGACTTTGGATTAACCACAGCTGTGGGGCCGACGAGAAGCTaGGCTATTGATCCAAGGCCAGGCAAGCTGAAATTCACAGGTCCT +
Preference number: 5 (lower is better)
Translates to: VDDFGLTTAVGPTRS*AIDPRPGKLKFTGP
Trigger: AGGACCTGTGAATTTCAGCTTGCCTGGCCTTGGATCAATAGCCCAGCTTCTCGTCGGCCCCACAGCTGTGGTTAATCCAAAGTCGTCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322886.12
CDS-3UTR CAA 90 bp AGTGTGGATGAAAGAGAGAGGAAGGACCCGTGCTCAGGACGGGATGGTTTGCATACAGGCCCGATCCACTaGAAGGCTGGTTTACGACCT +
Preference number: 5 (lower is better)
Translates to: SVDERERKDPCSGRDGLHTGPIH*KAGLRP
Trigger: AGGTCGTAAACCAGCCTTCAAGTGGATCGGGCCTGT...ATGCAAACCATCCCGTCCTGAGCACGGGTCCTTCCTCTCTCTTTCATCCACACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS TCA 90 bp CTTTGGATTAACCACAGCTGTGGGGCCGACGAGAAGCTGGGCTATTaGTCCAAGGCCAGGCAAGCTGAAATTCACAGGTCCTGTGTTTGG +
Preference number: 5 (lower is better)
Translates to: LWINHSCGADEKLGY*SKARQAEIHRSCVW
Trigger: CCAAACACAGGACCTGTGAATTTCAGCTTGCCTGGCCTTGGATCAATAGCCCAGCTTCTCGTCGGCCCCACAGCTGTGGTTAATCCAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322886.12
CDS TCA 90 bp TTTCTCTTCTCTTCAGGACAGGGTCTCCAAGGCTGCCGGGTGTCTTaGAAAACGTCTCACGATGTGTGCGTTGGATGCTCTTGGGGGTCA +
Preference number: 5 (lower is better)
Translates to: FLFSSGQGLQGCRVS*KTSHDVCVGCSWGS
Trigger: TGACCCCCAAGAGCATCCAACGCACACATCGTGAGACGTTTTTCAAGACACCCGGCAGCCTTGGAGACCCTGTCCTGAAGAGAAGAGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CAA 90 bp ATGGTTTGCATCCCGCCTCGGACATCCGGGACTCTCAGGGCGTTTGATCCCACCCTGTTTTGCACAGACTaGAATCTGGCCATATGTTTC +
Preference number: 5 (lower is better)
Translates to: MVCIPPRTSGTLRAFDPTLFCTD*NLAICF
Trigger: GAAACATATGGCCAGATTCAAGTCTGTGCAAAACAG...GGTGGGATCAAACGCCCTGAGAGTCCCGGATGTCCGAGGCGGGATGCAAACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CAA 90 bp TGCTCAGGACGGGATGGTTTGCATCCCGCCTCGGACATCCGGGACTCTCAGGGCAGCAAAGAAGGCTCTTaGGTGCTTTCATTTTCTTTT +
Preference number: 5 (lower is better)
Translates to: CSGRDGLHPASDIRDSQGSKEGS*VLSFSF
Trigger: AAAAGAAAATGAAAGCACCAAAGAGCCTTCTTTGCT...GCCCTGAGAGTCCCGGATGTCCGAGGCGGGATGCAAACCATCCCGTCCTGAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CAA 90 bp TGCTCAGGACGGGATGGTTTGCATCCCGCCTCGGACATCCGGGACTCTCAGGGCCCAACTAACTACAGTTaGAATACCCTTGGATATGAA +
Preference number: 5 (lower is better)
Translates to: CSGRDGLHPASDIRDSQGPTNYS*NTLGYE
Trigger: TTCATATCCAAGGGTATTCAAACTGTAGTTAGTTGG...GCCCTGAGAGTCCCGGATGTCCGAGGCGGGATGCAAACCATCCCGTCCTGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CAA 90 bp AGTGTGGATGAAAGAGAGAGGAAGGACCCGTGCTCAGGACGGGATGGTTTGCATTTCTGCAGCAGGGAGTaGGCCATTCACATGAATGTC +
Preference number: 5 (lower is better)
Translates to: SVDERERKDPCSGRDGLHFCSRE*AIHMNV
Trigger: GACATTCATGTGAATGGCCAACTCCCTGCTGCAGAA...ATGCAAACCATCCCGTCCTGAGCACGGGTCCTTCCTCTCTCTTTCATCCACACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CAA 90 bp ATGGTTTGCATCCCGCCTCGGACATCCGGGACTCTCAGGGCGTTTGATCCCACCAAGAAACAAGAGAGTTaGCTGTTGCCTTTCCTGAAA +
Preference number: 5 (lower is better)
Translates to: MVCIPPRTSGTLRAFDPTKKQES*LLPFLK
Trigger: TTTCAGGAAAGGCAACAGCAAACTCTCTTGTTTCTT...GGTGGGATCAAACGCCCTGAGAGTCCCGGATGTCCGAGGCGGGATGCAAACCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CAA 90 bp ACAACCAACCCGTGCGCTCACCATTCTCATTTTTCAGAGGTACCAACTAACTACTCAGGACGGGATGGTTaGCATCCCGCCTCGGACATC +
Preference number: 5 (lower is better)
Translates to: TTNPCAHHSHFSEVPTNYSGRDG*HPASDI
Trigger: GATGTCCGAGGCGGGATGCAAACCATCCCGTCCTGA...GTAGTTAGTTGGTACCTCTGAAAAATGAGAATGGTGAGCGCACGGGTTGGTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS TCA 90 bp ACAGGCCAAACTCGAGTGAACTGCCATGAGCCAGGTTTATTTCAATaGGGTCAAGTGGGCAGTCCAGTTGGGGAGCCATCTGCTTCTCTT +
Preference number: 5 (lower is better)
Translates to: TGQTRVNCHEPGLFQ*GQVGSPVGEPSASL
Trigger: AAGAGAAGCAGATGGCTCCCCAACTGGACTGCCCACTTGACCTCATTGAAATAAACCTGGCTCATGGCAGTTCACTCGAGTTTGGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551558.1
CDS-3UTR CAA 90 bp TCAAGCCCACAGTCAGGGTTAGCACAGTTCATTTACAGCAAGGTGTGTCATTCAGGTTCCTCAGGGTTTTaGGCAGGCTGTGCCGTCCAT +
Preference number: 5 (lower is better)
Translates to: SSPQSGLAQFIYSKVCHSGSSGF*AGCAVH
Trigger: ATGGACGGCACAGCCTGCCAAAAACCCTGAGGAACC...TGAATGACACACCTTGCTGTAAATGAACTGTGCTAACCCTGACTGTGGGCTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CAA 90 bp ATGGTTTGCATCCCGCCTCGGACATCCGGGACTCTCAGGGCGTTTGATCCCACCAGCAAAGAAGGCTCTTaGGTGCTTTCATTTTCTTTT +
Preference number: 5 (lower is better)
Translates to: MVCIPPRTSGTLRAFDPTSKEGS*VLSFSF
Trigger: AAAAGAAAATGAAAGCACCAAAGAGCCTTCTTTGCT...GGTGGGATCAAACGCCCTGAGAGTCCCGGATGTCCGAGGCGGGATGCAAACCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CAA 90 bp ACAACCAACCCGTGCGCTCACCATTCTCATTTTTCAGAGGTACCAACTAACTACGTGCGTTGGATGCTCTaGGGGGTCACTGGAACTGGT +
Preference number: 5 (lower is better)
Translates to: TTNPCAHHSHFSEVPTNYVRWML*GVTGTG
Trigger: ACCAGTTCCAGTGACCCCCAAGAGCATCCAACGCAC...GTAGTTAGTTGGTACCTCTGAAAAATGAGAATGGTGAGCGCACGGGTTGGTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS GCA 90 bp AGCAGGGAGTTGGCCATTCACATGAATGTCTTTGAGGGGTATAGATaGCCTGTTACCCATAGTCTTGGGAGAGGCAAGGTCTGTGGAATC +
Preference number: 5 (lower is better)
Translates to: SRELAIHMNVFEGYR*PVTHSLGRGKVCGI
Trigger: GATTCCACAGACCTTGCCTCTCCCAAGACTATGGGTAACAGGGCATCTATACCCCTCAAAGACATTCATGTGAATGGCCAACTCCCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322886.12
ENST00000416496.6
ENST00000550669.5
CDS CCA 90 bp GCTGGCAGCACTAATGAGCATCTTCAGGTTAGCTGTGGGTGTCCATaGTTCCGCTTGCTGTCTGTCAACAAACTTAACTGGAGTAATGGG +
Preference number: 5 (lower is better)
Translates to: AGSTNEHLQVSCGCP*FRLLSVNKLNWSNG
Trigger: CCCATTACTCCAGTTAAGTTTGTTGACAGACAGCAAGCGGAACCATGGACACCCACAGCTAACCTGAAGATGCTCATTAGTGCTGCCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322886.12
ENST00000416496.6
ENST00000547316.1
ENST00000550669.5
ENST00000551558.1
CDS CCA 90 bp CAGAAGCAAGTGAGACATCCACTTGTCCATTCAGACCGTTCTGCATaGAGAATGCCTGCAGGTCCGTCTGAGCAACAGAAAATACTGGGT +
Preference number: 5 (lower is better)
Translates to: QKQVRHPLVHSDRSA*RMPAGPSEQQKILG
Trigger: ACCCAGTATTTTCTGTTGCTCAGACGGACCTGCAGGCATTCTCCATGCAGAACGGTCTGAATGGACAAGTGGATGTCTCACTTGCTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322886.12
ENST00000416496.6
ENST00000550669.5
CDS-3UTR CAA 90 bp AGACGATTCTTGAATCAAAACCATAAGTCAGTCGGCGCTTTCACTGTGACACCACAGGGTCCAAGCTGCTaGATGGAGGCACCACTCTCT +
Preference number: 5 (lower is better)
Translates to: RRFLNQNHKSVGAFTVTPQGPSC*MEAPLS
Trigger: AGAGAGTGGTGCCTCCATCAAGCAGCTTGGACCCTG...TGGTGTCACAGTGAAAGCGCCGACTGACTTATGGTTTTGATTCAAGAATCGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS TCA 90 bp CTGCTCGGTTCTGAGTTCACTTTCCTCTGGATCCTCTCAGAAGCCTaGACTGTGTTAAAAGAACCATGGCGAGCCAGCTTCTGTTTTGCA +
Preference number: 5 (lower is better)
Translates to: LLGSEFTFLWILSEA*TVLKEPWRASFCFA
Trigger: TGCAAAACAGAAGCTGGCTCGCCATGGTTCTTTTAACACAGTTCAGGCTTCTGAGAGGATCCAGAGGAAAGTGAACTCAGAACCGAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322886.12
ENST00000416496.6
ENST00000550669.5
CDS-3UTR CAA 90 bp AGAAAGGAAGCTTCTCTCACCACAGATTTACTCAGGGCAAGTGGAAATACATGTGGTTCCTCAGGGTTTTaGGCAGGCTGTGCCGTCCAT +
Preference number: 5 (lower is better)
Translates to: RKEASLTTDLLRASGNTCGSSGF*AGCAVH
Trigger: ATGGACGGCACAGCCTGCCAAAAACCCTGAGGAACC...ACATGTATTTCCACTTGCCCTGAGTAAATCTGTGGTGAGAGAAGCTTCCTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CAA 90 bp ACAACCAACCCGTGCGCTCACCATTCTCATTTTTCAGAGGTACCAACTAACTACGTCCAGCTCTTTCTGTaGGAGGTAGGCCATTTGCTC +
Preference number: 5 (lower is better)
Translates to: TTNPCAHHSHFSEVPTNYVQLFL*EVGHLL
Trigger: GAGCAAATGGCCTACCTCCAACAGAAAGAGCTGGAC...GTAGTTAGTTGGTACCTCTGAAAAATGAGAATGGTGAGCGCACGGGTTGGTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CAA 90 bp GGCCCGATCCACTTGAAGGCTGGTTTACGACCTCGCTCTTCTGTTACATGCACTTGTCTTTTCTACTGTTaGCAGATGAAGAGGGACAGT +
Preference number: 5 (lower is better)
Translates to: GPIHLKAGLRPRSSVTCTCLFYC*QMKRDS
Trigger: ACTGTCCCTCTTCATCTGCAAACAGTAGAAAAGACA...AGTGCATGTAACAGAAGAGCGAGGTCGTAAACCAGCCTTCAAGTGGATCGGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552907.5
CDS-3UTR CAA 90 bp CTCTTCTGTTACATGCACTTTCTTTATCAGAGCCAAGCTGGTCAGAACATTGGCACAGGCCCGATCCACTaGAAGGCTGGTTTACGACCT +
Preference number: 5 (lower is better)
Translates to: LFCYMHFLYQSQAGQNIGTGPIH*KAGLRP
Trigger: AGGTCGTAAACCAGCCTTCAAGTGGATCGGGCCTGT...GCCAATGTTCTGACCAGCTTGGCTCTGATAAAGAAAGTGCATGTAACAGAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552907.5
CDS-3UTR CAA 90 bp CTCAAGATTGCCATTGCTTCTTCACTACCCAAAATATCCAAGTCTAGCGCAGCAGTCCAGCTCTTTCTGTaGGAGGTAGGCCATTTGCTC +
Preference number: 5 (lower is better)
Translates to: LKIAIASSLPKISKSSAAVQLFL*EVGHLL
Trigger: GAGCAAATGGCCTACCTCCAACAGAAAGAGCTGGAC...TGCTGCGCTAGACTTGGATATTTTGGGTAGTGAAGAAGCAATGGCAATCTTGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CAA 90 bp ACGACCTCGCTCTTCTGTTACATGCACTTTCTTTATCAGAGCCAAGCTGGTCAGGTGACAATCTTGGTTTaGGAGACGAGGAACAGCATG +
Preference number: 5 (lower is better)
Translates to: TTSLFCYMHFLYQSQAGQVTILV*ETRNSM
Trigger: CATGCTGTTCCTCGTCTCCAAAACCAAGATTGTCAC...CTGACCAGCTTGGCTCTGATAAAGAAAGTGCATGTAACAGAAGAGCGAGGTCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552907.5
CDS-3UTR CAA 90 bp CTAGCGCAGCAGCTTCAATTCCACCAGTTGTTCTGTAAGATTTATTTTCCTGACAAACCGGGCCCGGCATaGCAGGAGAATAGAGAACAG +
Preference number: 5 (lower is better)
Translates to: LAQQLQFHQLFCKIYFPDKPGPA*QENREQ
Trigger: CTGTTCTCTATTCTCCTGCAATGCCGGGCCCGGTTT...GTCAGGAAAATAAATCTTACAGAACAACTGGTGGAATTGAAGCTGCTGCGCTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322886.12
CDS-3UTR CAA 90 bp AGACGATTCTTGAATCAAAACCATAAGTCAGTCGGCGCTTTCACTGTGACACCAAGGCTGCCGGGTGTCTaGAAAAACGTCTCACGATGT +
Preference number: 5 (lower is better)
Translates to: RRFLNQNHKSVGAFTVTPRLPGV*KNVSRC
Trigger: ACATCGTGAGACGTTTTTCAAGACACCCGGCAGCCT...TGGTGTCACAGTGAAAGCGCCGACTGACTTATGGTTTTGATTCAAGAATCGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS TCA 90 bp TGTCCATTCAGACCGTTCTGCATGGAGAATGCCTGCAGGTCCGTCTaGGCAACAGAAAATACTGGGTGGGCTAAAGGATTAACACAATAT +
Preference number: 5 (lower is better)
Translates to: CPFRPFCMENACRSV*ATENTGWAKGLTQY
Trigger: ATATTGTGTTAATCCTTTAGCCCACCCAGTATTTTCTGTTGCTCAGACGGACCTGCAGGCATTCTCCATGCAGAACGGTCTGAATGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322886.12
ENST00000416496.6
ENST00000550669.5
CDS GCA 90 bp TTTATTTCAATGAGGTCAAGTGGGCAGTCCAGTTGGGGAGCCATCTaGTTCTCTTTCTTCAGTGAGGAGAATAAGAGAACATCTCCCTCC +
Preference number: 5 (lower is better)
Translates to: FISMRSSGQSSWGAI*FSFFSEENKRTSPS
Trigger: GGAGGGAGATGTTCTCTTATTCTCCTCACTGAAGAAAGAGAAGCAGATGGCTCCCCAACTGGACTGCCCACTTGACCTCATTGAAATAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551558.1
CDS-3UTR CAA 90 bp ACAACCAACCCGTGCGCTCACCATTCTCATTTTTCAGAGGTACCAACTAACTACTGTCCATGGTTCCGCTaGCTGTCTGTCAACAAACTT +
Preference number: 5 (lower is better)
Translates to: TTNPCAHHSHFSEVPTNYCPWFR*LSVNKL
Trigger: AAGTTTGTTGACAGACAGCAAGCGGAACCATGGACA...GTAGTTAGTTGGTACCTCTGAAAAATGAGAATGGTGAGCGCACGGGTTGGTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CAA 90 bp ACGACCTCGCTCTTCTGTTACATGCACTTTCTTTATCAGAGCCAAGCTGGTCAGTTGGAGGTAGGCCATTaGCTCTTCATATTTCTGCTC +
Preference number: 5 (lower is better)
Translates to: TTSLFCYMHFLYQSQAGQLEVGH*LFIFLL
Trigger: GAGCAGAAATATGAAGAGCAAATGGCCTACCTCCAA...CTGACCAGCTTGGCTCTGATAAAGAAAGTGCATGTAACAGAAGAGCGAGGTCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552907.5
CDS-3UTR CAA 90 bp CTGTTACATGCACTTTCTTTATCAGAGCCAAGCTGGTCAGAACATTGGCTATGTGTCCAGCTCTTTCTGTaGGAGGTAGGCCATTTGCTC +
Preference number: 5 (lower is better)
Translates to: LLHALSLSEPSWSEHWLCVQLFL*EVGHLL
Trigger: GAGCAAATGGCCTACCTCCAACAGAAAGAGCTGGAC...ACATAGCCAATGTTCTGACCAGCTTGGCTCTGATAAAGAAAGTGCATGTAACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552907.5
CDS-3UTR CAA 90 bp ACAACCAACCCGTGCGCTCACCATTCTCATTTTTCAGAGGTACCAACTAACTACGTGACAATCTTGGTTTaGGAGACGAGGAACAGCATG +
Preference number: 5 (lower is better)
Translates to: TTNPCAHHSHFSEVPTNYVTILV*ETRNSM
Trigger: CATGCTGTTCCTCGTCTCCAAAACCAAGATTGTCAC...GTAGTTAGTTGGTACCTCTGAAAAATGAGAATGGTGAGCGCACGGGTTGGTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CAA 90 bp ACAACCAACCCGTGCGCTCACCATTCTCATTTTTCAGAGGTACCAACTAACTACTCCAGAGTGACAATCTaGGTTTTGGAGACGAGGAAC +
Preference number: 5 (lower is better)
Translates to: TTNPCAHHSHFSEVPTNYSRVTI*VLETRN
Trigger: GTTCCTCGTCTCCAAAACCAAGATTGTCACTCTGGA...GTAGTTAGTTGGTACCTCTGAAAAATGAGAATGGTGAGCGCACGGGTTGGTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CAA 90 bp CTCAAGATTGCCATTGCTTCTTCACTACCCAAAATATCCAAGTCTAGCGCAGCAGAGCCAGCTTCTGTTTaGCACAGACTTGAATCTGGC +
Preference number: 5 (lower is better)
Translates to: LKIAIASSLPKISKSSAAEPASV*HRLESG
Trigger: GCCAGATTCAAGTCTGTGCAAAACAGAAGCTGGCTC...TGCTGCGCTAGACTTGGATATTTTGGGTAGTGAAGAAGCAATGGCAATCTTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CAA 90 bp AGAAAGGAAGCTTCTCTCACCACAGATTTACTCAGGGCAAGTGGAAATACATGTCTGTTACCCATAGTCTaGGGAGAGGCAAGGTCTGTG +
Preference number: 5 (lower is better)
Translates to: RKEASLTTDLLRASGNTCLLPIV*GEARSV
Trigger: CACAGACCTTGCCTCTCCCAAGACTATGGGTAACAG...ACATGTATTTCCACTTGCCCTGAGTAAATCTGTGGTGAGAGAAGCTTCCTTTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CAA 90 bp ACAGTTTCCAGAATTGTATTCATGCTAGAACAACCAACCCGTGCGCTCACCATTTTCTGCAGCAGGGAGTaGGCCATTCACATGAATGTC +
Preference number: 5 (lower is better)
Translates to: TVSRIVFMLEQPTRALTIFCSRE*AIHMNV
Trigger: GACATTCATGTGAATGGCCAACTCCCTGCTGCAGAA...AATGGTGAGCGCACGGGTTGGTTGTTCTAGCATGAATACAATTCTGGAAACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CAA 90 bp AGACGATTCTTGAATCAAAACCATAAGTCAGTCGGCGCTTTCACTGTGACACCACGACACTGTGTGACCTaGACATCACTGGACTTAGGT +
Preference number: 5 (lower is better)
Translates to: RRFLNQNHKSVGAFTVTPRHCVT*TSLDLG
Trigger: ACCTAAGTCCAGTGATGTCAAGGTCACACAGTGTCG...TGGTGTCACAGTGAAAGCGCCGACTGACTTATGGTTTTGATTCAAGAATCGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322886.12
CDS-3UTR CAA 90 bp CACAGATTTACTCAGGGCAAGTGGAAATACATGTTAAGAATGCTTACCCTAGTTCTCACGATGTGTGCGTaGGATGCTCTTGGGGGTCAC +
Preference number: 5 (lower is better)
Translates to: HRFTQGKWKYMLRMLTLVLTMCA*DALGGH
Trigger: GTGACCCCCAAGAGCATCCAACGCACACATCGTGAG...AACTAGGGTAAGCATTCTTAACATGTATTTCCACTTGCCCTGAGTAAATCTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CAA 90 bp AGTGTGGATGAAAGAGAGAGGAAGGACCCGTGCTCAGGACGGGATGGTTTGCATATAATAGACTCAAGATaGCCATTGCTTCTTCACTAC +
Preference number: 5 (lower is better)
Translates to: SVDERERKDPCSGRDGLHIIDSR*PLLLHY
Trigger: GTAGTGAAGAAGCAATGGCAATCTTGAGTCTATTAT...ATGCAAACCATCCCGTCCTGAGCACGGGTCCTTCCTCTCTCTTTCATCCACACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS GCA 90 bp GGCACTTCCCATCTGAGCAGTGAATCTGCAGAAGAGACCATCACTTaGTCTTTCTCTGCCATTACTCATGAAGTTACAATGGACTCACAA +
Preference number: 5 (lower is better)
Translates to: GTSHLSSESAEETIT*SFSAITHEVTMDSQ
Trigger: TTGTGAGTCCATTGTAACTTCATGAGTAATGGCAGAGAAAGAGCAAGTGATGGTCTCTTCTGCAGATTCACTGCTCAGATGGGAAGTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551558.1
CDS CCA 90 bp GACCTCGCTCTTCTGTTACATGCACTTTCTTTATCAGAGCCAAGCTaGTCAGAACATTGGCTATGTCATAGAGGCGTCGTACCTTTGTTT +
Preference number: 5 (lower is better)
Translates to: DLALLLHALSLSEPS*SEHWLCHRGVVPLF
Trigger: AAACAAAGGTACGACGCCTCTATGACATAGCCAATGTTCTGACCAGCTTGGCTCTGATAAAGAAAGTGCATGTAACAGAAGAGCGAGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322886.12
ENST00000416496.6
ENST00000550669.5
CDS-3UTR CAA 90 bp AGACGATTCTTGAATCAAAACCATAAGTCAGTCGGCGCTTTCACTGTGACACCAGTGACAATCTTGGTTTaGGAGACGAGGAACAGCATG +
Preference number: 5 (lower is better)
Translates to: RRFLNQNHKSVGAFTVTPVTILV*ETRNSM
Trigger: CATGCTGTTCCTCGTCTCCAAAACCAAGATTGTCAC...TGGTGTCACAGTGAAAGCGCCGACTGACTTATGGTTTTGATTCAAGAATCGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CAA 90 bp CTCGCTCTTCTGTTACATGCACTTTCTTTATCAGAGCCAAGCTGGTCAGAACATTCCAGAGTGACAATCTaGGTTTTGGAGACGAGGAAC +
Preference number: 5 (lower is better)
Translates to: LALLLHALSLSEPSWSEHSRVTI*VLETRN
Trigger: GTTCCTCGTCTCCAAAACCAAGATTGTCACTCTGGA...ATGTTCTGACCAGCTTGGCTCTGATAAAGAAAGTGCATGTAACAGAAGAGCGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552907.5
CDS-3UTR CAA 90 bp GGTAAGACAGATGCAGAAACATCCACCAGTTCTTCATCACTTGAGCTGAAGTCCTCTTCTATCAGTATTTaGGCAGCCACATCCAGAGTG +
Preference number: 5 (lower is better)
Translates to: GKTDAETSTSSSSLELKSSSISI*AATSRV
Trigger: CACTCTGGATGTGGCTGCCAAAATACTGATAGAAGA...GGACTTCAGCTCAAGTGATGAAGAACTGGTGGATGTTTCTGCATCTGTCTTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552907.5
CDS-3UTR CAA 90 bp GGTTTACGACCTCGCTCTTCTGTTACATGCACTTTCTTTATCAGAGCCAAGCTGATGGTCTGGGGCATCTaGGCTTTCTTCTATCAGTAT +
Preference number: 5 (lower is better)
Translates to: GLRPRSSVTCTFFIRAKLMVWGI*AFFYQY
Trigger: ATACTGATAGAAGAAAGCCAAGATGCCCCAGACCAT...CAGCTTGGCTCTGATAAAGAAAGTGCATGTAACAGAAGAGCGAGGTCGTAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552907.5
CDS-3UTR CAA 90 bp CACAGATTTACTCAGGGCAAGTGGAAATACATGTTAAGAATGCTTACCCTAGTTACAGGCCCGATCCACTaGAAGGCTGGTTTACGACCT +
Preference number: 5 (lower is better)
Translates to: HRFTQGKWKYMLRMLTLVTGPIH*KAGLRP
Trigger: AGGTCGTAAACCAGCCTTCAAGTGGATCGGGCCTGT...AACTAGGGTAAGCATTCTTAACATGTATTTCCACTTGCCCTGAGTAAATCTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CAA 90 bp AGCTTCTCTCACCACAGATTTACTCAGGGCAAGTGGAAATACATGTTAAGAATGGAATCTGAGGGTTTCTaGGGCATGACAAGCGACAGC +
Preference number: 5 (lower is better)
Translates to: SFSHHRFTQGKWKYMLRMESEGF*GMTSDS
Trigger: GCTGTCGCTTGTCATGCCCAAGAAACCCTCAGATTC...CATTCTTAACATGTATTTCCACTTGCCCTGAGTAAATCTGTGGTGAGAGAAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CAA 90 bp CCACAGATTTACTCAGGGCAAGTGGAAATACATGTTAAGAATGCTTACCCTAGTCTGTTACCCATAGTCTaGGGAGAGGCAAGGTCTGTG +
Preference number: 5 (lower is better)
Translates to: PQIYSGQVEIHVKNAYPSLLPIV*GEARSV
Trigger: CACAGACCTTGCCTCTCCCAAGACTATGGGTAACAG...ACTAGGGTAAGCATTCTTAACATGTATTTCCACTTGCCCTGAGTAAATCTGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CAA 90 bp CACATCATTACTCTTCAGAATTCAACGAAAAGGTCTCATCCAGGTTCCAATTTTCGAGAAGCTGGGCTATaGATCCAAGGCCAGGCAAGC +
Preference number: 5 (lower is better)
Translates to: HIITLQNSTKRSHPGSNFREAGL*IQGQAS
Trigger: GCTTGCCTGGCCTTGGATCAATAGCCCAGCTTCTCG...AAAATTGGAACCTGGATGAGACCTTTTCGTTGAATTCTGAAGAGTAATGATGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000322886.12
CDS-3UTR CAA 90 bp AATTTTCACATCATTACTCTTCAGAATTCAACGAAAAGGTCTCATCCAGGTTCCCTCACGATGTGTGCGTaGGATGCTCTTGGGGGTCAC +
Preference number: 5 (lower is better)
Translates to: NFHIITLQNSTKRSHPGSLTMCA*DALGGH
Trigger: GTGACCCCCAAGAGCATCCAACGCACACATCGTGAG...GGAACCTGGATGAGACCTTTTCGTTGAATTCTGAAGAGTAATGATGTGAAAATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CAA 90 bp AGCTTCTCTCACCACAGATTTACTCAGGGCAAGTGGAAATACATGTTAAGAATGAGGCTGCCGGGTGTCTaGAAAAACGTCTCACGATGT +
Preference number: 5 (lower is better)
Translates to: SFSHHRFTQGKWKYMLRMRLPGV*KNVSRC
Trigger: ACATCGTGAGACGTTTTTCAAGACACCCGGCAGCCT...CATTCTTAACATGTATTTCCACTTGCCCTGAGTAAATCTGTGGTGAGAGAAGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CAA 90 bp TCAAGCCCACAGTCAGGGTTAGCACAGTTCATTTACAGCAAGGTGTGTCATTCATTATACCCCCGACTCTaGTACCAGAATGAAAGGGTT +
Preference number: 5 (lower is better)
Translates to: SSPQSGLAQFIYSKVCHSLYPRL*YQNERV
Trigger: AACCCTTTCATTCTGGTACAAGAGTCGGGGGTATAA...TGAATGACACACCTTGCTGTAAATGAACTGTGCTAACCCTGACTGTGGGCTTGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS GCA 90 bp CTAATGAGCATCTTCAGGTTAGCTGTGGGTGTCCATGGTTCCGCTTaGTGTCTGTCAACAAACTTAACTGGAGTAATGGGATTTCTTTCT +
Preference number: 5 (lower is better)
Translates to: LMSIFRLAVGVHGSA*CLSTNLTGVMGFLS
Trigger: AGAAAGAAATCCCATTACTCCAGTTAAGTTTGTTGACAGACAGCAAGCGGAACCATGGACACCCACAGCTAACCTGAAGATGCTCATTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322886.12
ENST00000416496.6
ENST00000547316.1
ENST00000550669.5
ENST00000551558.1
CDS-3UTR CAA 90 bp CTTCACTACCCAAAATATCCAAGTCTAGCGCAGCAGCTTCAATTCCACCAGTTGTTGACAAGGGATAACTaGGATAGCGAGCTAGAAACT +
Preference number: 5 (lower is better)
Translates to: LHYPKYPSLAQQLQFHQLLTRDN*DSELET
Trigger: AGTTTCTAGCTCGCTATCCAAGTTATCCCTTGTCAA...CAACTGGTGGAATTGAAGCTGCTGCGCTAGACTTGGATATTTTGGGTAGTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CAA 90 bp TTACGACCTCGCTCTTCTGTTACATGCACTTTCTTTATCAGAGCCAAGCTGGTCTTGACAAGGGATAACTaGGATAGCGAGCTAGAAACT +
Preference number: 5 (lower is better)
Translates to: LRPRSSVTCTFFIRAKLVLTRDN*DSELET
Trigger: AGTTTCTAGCTCGCTATCCAAGTTATCCCTTGTCAA...GACCAGCTTGGCTCTGATAAAGAAAGTGCATGTAACAGAAGAGCGAGGTCGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552907.5
CDS-3UTR CAA 90 bp ACAACCAACCCGTGCGCTCACCATTCTCATTTTTCAGAGGTACCAACTAACTACTGTCTTTTCTACTGTTaGCAGATGAAGAGGGACAGT +
Preference number: 5 (lower is better)
Translates to: TTNPCAHHSHFSEVPTNYCLFYC*QMKRDS
Trigger: ACTGTCCCTCTTCATCTGCAAACAGTAGAAAAGACA...GTAGTTAGTTGGTACCTCTGAAAAATGAGAATGGTGAGCGCACGGGTTGGTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CAA 90 bp CTCAAGATTGCCATTGCTTCTTCACTACCCAAAATATCCAAGTCTAGCGCAGCAATGGTCTGGGGCATCTaGGCTTTCTTCTATCAGTAT +
Preference number: 5 (lower is better)
Translates to: LKIAIASSLPKISKSSAAMVWGI*AFFYQY
Trigger: ATACTGATAGAAGAAAGCCAAGATGCCCCAGACCAT...TGCTGCGCTAGACTTGGATATTTTGGGTAGTGAAGAAGCAATGGCAATCTTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CAA 90 bp TCAAGCCCACAGTCAGGGTTAGCACAGTTCATTTACAGCAAGGTGTGTCATTCACTGTTTTGCACAGACTaGAATCTGGCCATATGTTTC +
Preference number: 5 (lower is better)
Translates to: SSPQSGLAQFIYSKVCHSLFCTD*NLAICF
Trigger: GAAACATATGGCCAGATTCAAGTCTGTGCAAAACAG...TGAATGACACACCTTGCTGTAAATGAACTGTGCTAACCCTGACTGTGGGCTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CAA 90 bp CACAGATTTACTCAGGGCAAGTGGAAATACATGTTAAGAATGCTTACCCTAGTTGAATCTGAGGGTTTCTaGGGCATGACAAGCGACAGC +
Preference number: 5 (lower is better)
Translates to: HRFTQGKWKYMLRMLTLVESEGF*GMTSDS
Trigger: GCTGTCGCTTGTCATGCCCAAGAAACCCTCAGATTC...AACTAGGGTAAGCATTCTTAACATGTATTTCCACTTGCCCTGAGTAAATCTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CAA 90 bp CTCTCACCACAGATTTACTCAGGGCAAGTGGAAATACATGTTAAGAATGCTTACTGTCCATGGTTCCGCTaGCTGTCTGTCAACAAACTT +
Preference number: 5 (lower is better)
Translates to: LSPQIYSGQVEIHVKNAYCPWFR*LSVNKL
Trigger: AAGTTTGTTGACAGACAGCAAGCGGAACCATGGACA...GTAAGCATTCTTAACATGTATTTCCACTTGCCCTGAGTAAATCTGTGGTGAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CAA 90 bp AGACGATTCTTGAATCAAAACCATAAGTCAGTCGGCGCTTTCACTGTGACACCAGTAAATGCATCGTCCTaGTTTTCAATGGGTCGGAAT +
Preference number: 5 (lower is better)
Translates to: RRFLNQNHKSVGAFTVTPVNASS*FSMGRN
Trigger: ATTCCGACCCATTGAAAACAAGGACGATGCATTTAC...TGGTGTCACAGTGAAAGCGCCGACTGACTTATGGTTTTGATTCAAGAATCGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CAA 90 bp AGACGATTCTTGAATCAAAACCATAAGTCAGTCGGCGCTTTCACTGTGACACCATGTCTTTTCTACTGTTaGCAGATGAAGAGGGACAGT +
Preference number: 5 (lower is better)
Translates to: RRFLNQNHKSVGAFTVTPCLFYC*QMKRDS
Trigger: ACTGTCCCTCTTCATCTGCAAACAGTAGAAAAGACA...TGGTGTCACAGTGAAAGCGCCGACTGACTTATGGTTTTGATTCAAGAATCGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CAA 90 bp CCACAGATTTACTCAGGGCAAGTGGAAATACATGTTAAGAATGCTTACCCTAGTTCCAGAGTGACAATCTaGGTTTTGGAGACGAGGAAC +
Preference number: 5 (lower is better)
Translates to: PQIYSGQVEIHVKNAYPSSRVTI*VLETRN
Trigger: GTTCCTCGTCTCCAAAACCAAGATTGTCACTCTGGA...ACTAGGGTAAGCATTCTTAACATGTATTTCCACTTGCCCTGAGTAAATCTGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CAA 90 bp AGCTTCTCTCACCACAGATTTACTCAGGGCAAGTGGAAATACATGTTAAGAATGTTGGAGGTAGGCCATTaGCTCTTCATATTTCTGCTC +
Preference number: 5 (lower is better)
Translates to: SFSHHRFTQGKWKYMLRMLEVGH*LFIFLL
Trigger: GAGCAGAAATATGAAGAGCAAATGGCCTACCTCCAA...CATTCTTAACATGTATTTCCACTTGCCCTGAGTAAATCTGTGGTGAGAGAAGCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CAA 90 bp CTCTCACCACAGATTTACTCAGGGCAAGTGGAAATACATGTTAAGAATGCTTACTCTTCTATCAGTATTTaGGCAGCCACATCCAGAGTG +
Preference number: 5 (lower is better)
Translates to: LSPQIYSGQVEIHVKNAYSSISI*AATSRV
Trigger: CACTCTGGATGTGGCTGCCAAAATACTGATAGAAGA...GTAAGCATTCTTAACATGTATTTCCACTTGCCCTGAGTAAATCTGTGGTGAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CAA 90 bp TTTCACATCATTACTCTTCAGAATTCAACGAAAAGGTCTCATCCAGGTTCCAATGAGCCAGCTTCTGTTTaGCACAGACTTGAATCTGGC +
Preference number: 5 (lower is better)
Translates to: FHIITLQNSTKRSHPGSNEPASV*HRLESG
Trigger: GCCAGATTCAAGTCTGTGCAAAACAGAAGCTGGCTC...ATTGGAACCTGGATGAGACCTTTTCGTTGAATTCTGAAGAGTAATGATGTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CAA 90 bp TCAAGCCCACAGTCAGGGTTAGCACAGTTCATTTACAGCAAGGTGTGTCATTCATATACCCTGCACAGATaGAAACCTGAAAAAGGTATA +
Preference number: 5 (lower is better)
Translates to: SSPQSGLAQFIYSKVCHSYTLHR*KPEKGI
Trigger: TATACCTTTTTCAGGTTTCAATCTGTGCAGGGTATA...TGAATGACACACCTTGCTGTAAATGAACTGTGCTAACCCTGACTGTGGGCTTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CAA 90 bp AGCTTCTCTCACCACAGATTTACTCAGGGCAAGTGGAAATACATGTTAAGAATGTCTTCGGGGCCATCCTaGATCGATCAACAAATATAT +
Preference number: 5 (lower is better)
Translates to: SFSHHRFTQGKWKYMLRMSSGPS*IDQQIY
Trigger: ATATATTTGTTGATCGATCAAGGATGGCCCCGAAGA...CATTCTTAACATGTATTTCCACTTGCCCTGAGTAAATCTGTGGTGAGAGAAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CAA 90 bp CACAGATTTACTCAGGGCAAGTGGAAATACATGTTAAGAATGCTTACCCTAGTTTTGGAGGTAGGCCATTaGCTCTTCATATTTCTGCTC +
Preference number: 5 (lower is better)
Translates to: HRFTQGKWKYMLRMLTLVLEVGH*LFIFLL
Trigger: GAGCAGAAATATGAAGAGCAAATGGCCTACCTCCAA...AACTAGGGTAAGCATTCTTAACATGTATTTCCACTTGCCCTGAGTAAATCTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CAA 90 bp CACAGATTTACTCAGGGCAAGTGGAAATACATGTTAAGAATGCTTACCCTAGTTATGGTCTGGGGCATCTaGGCTTTCTTCTATCAGTAT +
Preference number: 5 (lower is better)
Translates to: HRFTQGKWKYMLRMLTLVMVWGI*AFFYQY
Trigger: ATACTGATAGAAGAAAGCCAAGATGCCCCAGACCAT...AACTAGGGTAAGCATTCTTAACATGTATTTCCACTTGCCCTGAGTAAATCTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CAA 90 bp ACAGTTTCCAGAATTGTATTCATGCTAGAACAACCAACCCGTGCGCTCACCATTCATTTAACCATGCAATaGTTGATGGTTAGAACCACA +
Preference number: 5 (lower is better)
Translates to: TVSRIVFMLEQPTRALTIHLTMQ*LMVRTT
Trigger: TGTGGTTCTAACCATCAACAATTGCATGGTTAAATG...AATGGTGAGCGCACGGGTTGGTTGTTCTAGCATGAATACAATTCTGGAAACTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CAA 90 bp AGCTTCTCTCACCACAGATTTACTCAGGGCAAGTGGAAATACATGTTAAGAATGGACTCAAGATTGCCATaGCTTCTTCACTACCCAAAA +
Preference number: 5 (lower is better)
Translates to: SFSHHRFTQGKWKYMLRMDSRLP*LLHYPK
Trigger: TTTTGGGTAGTGAAGAAGCAATGGCAATCTTGAGTC...CATTCTTAACATGTATTTCCACTTGCCCTGAGTAAATCTGTGGTGAGAGAAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CAA 90 bp TTTCACATCATTACTCTTCAGAATTCAACGAAAAGGTCTCATCCAGGTTCCAATTCTTCTATCAGTATTTaGGCAGCCACATCCAGAGTG +
Preference number: 5 (lower is better)
Translates to: FHIITLQNSTKRSHPGSNSSISI*AATSRV
Trigger: CACTCTGGATGTGGCTGCCAAAATACTGATAGAAGA...ATTGGAACCTGGATGAGACCTTTTCGTTGAATTCTGAAGAGTAATGATGTGAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CAA 90 bp CTTGCCCTGTATCAATTTTCACATCATTACTCTTCAGAATTCAACGAAAAGGTCTTCATATTCCCTACTTaGCCTTTTAGTGGCTGGCTC +
Preference number: 5 (lower is better)
Translates to: LALYQFSHHYSSEFNEKVFIFPT*PFSGWL
Trigger: GAGCCAGCCACTAAAAGGCAAAGTAGGGAATATGAA...GACCTTTTCGTTGAATTCTGAAGAGTAATGATGTGAAAATTGATACAGGGCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS CCA 90 bp AAGTTGATGGAGGTGAAGATTCTTACTTTTAAATTTACTATGGTCTaGGGCATCTTGGCTTTCTTCTATCAGTATTTTGGCAGCCACATC +
Preference number: 5 (lower is better)
Translates to: KLMEVKILTFKFTMV*GILAFFYQYFGSHI
Trigger: GATGTGGCTGCCAAAATACTGATAGAAGAAAGCCAAGATGCCCCAGACCATAGTAAATTTAAAAGTAAGAATCTTCACCTCCATCAACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551058.1
CDS-3UTR CAA 90 bp CCACAGATTTACTCAGGGCAAGTGGAAATACATGTTAAGAATGCTTACCCTAGTCCAACTAACTACAGTTaGAATACCCTTGGATATGAA +
Preference number: 5 (lower is better)
Translates to: PQIYSGQVEIHVKNAYPSPTNYS*NTLGYE
Trigger: TTCATATCCAAGGGTATTCAAACTGTAGTTAGTTGG...ACTAGGGTAAGCATTCTTAACATGTATTTCCACTTGCCCTGAGTAAATCTGTGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CAA 90 bp AACAGTAATATCTCACTGTTCACACAGTTATTTGAGAAGCAGCAGTTAGGCTGCCATTTAACCATGCAATaGTTGATGGTTAGAACCACA +
Preference number: 5 (lower is better)
Translates to: NSNISLFTQLFEKQQLGCHLTMQ*LMVRTT
Trigger: TGTGGTTCTAACCATCAACAATTGCATGGTTAAATG...GCAGCCTAACTGCTGCTTCTCAAATAACTGTGTGAACAGTGAGATATTACTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CAA 90 bp AGCTTCTCTCACCACAGATTTACTCAGGGCAAGTGGAAATACATGTTAAGAATGTATACCCTGCACAGATaGAAACCTGAAAAAGGTATA +
Preference number: 5 (lower is better)
Translates to: SFSHHRFTQGKWKYMLRMYTLHR*KPEKGI
Trigger: TATACCTTTTTCAGGTTTCAATCTGTGCAGGGTATA...CATTCTTAACATGTATTTCCACTTGCCCTGAGTAAATCTGTGGTGAGAGAAGCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CAA 90 bp CTCTCACCACAGATTTACTCAGGGCAAGTGGAAATACATGTTAAGAATGCTTACATAATAGACTCAAGATaGCCATTGCTTCTTCACTAC +
Preference number: 5 (lower is better)
Translates to: LSPQIYSGQVEIHVKNAYIIDSR*PLLLHY
Trigger: GTAGTGAAGAAGCAATGGCAATCTTGAGTCTATTAT...GTAAGCATTCTTAACATGTATTTCCACTTGCCCTGAGTAAATCTGTGGTGAGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CAA 90 bp AGTTTGAATACCCTTGGATATGAAACATATGTCCATTTTCCCTCTTACTCTTCTTTATACCCCCGACTCTaGTACCAGAATGAAAGGGTT +
Preference number: 5 (lower is better)
Translates to: SLNTLGYETYVHFPSYSSLYPRL*YQNERV
Trigger: AACCCTTTCATTCTGGTACAAGAGTCGGGGGTATAA...AGAAGAGTAAGAGGGAAAATGGACATATGTTTCATATCCAAGGGTATTCAAACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CAA 90 bp TTTCACATCATTACTCTTCAGAATTCAACGAAAAGGTCTCATCCAGGTTCCAATAAGAAACAAGAGAGTTaGCTGTTGCCTTTCCTGAAA +
Preference number: 5 (lower is better)
Translates to: FHIITLQNSTKRSHPGSNKKQES*LLPFLK
Trigger: TTTCAGGAAAGGCAACAGCAAACTCTCTTGTTTCTT...ATTGGAACCTGGATGAGACCTTTTCGTTGAATTCTGAAGAGTAATGATGTGAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CAA 90 bp CACAGATTTACTCAGGGCAAGTGGAAATACATGTTAAGAATGCTTACCCTAGTTTCATTCACAGTTATTTaGGTCTTGACATGTGTCATG +
Preference number: 5 (lower is better)
Translates to: HRFTQGKWKYMLRMLTLVSFTVI*VLTCVM
Trigger: CATGACACATGTCAAGACCAAAATAACTGTGAATGA...AACTAGGGTAAGCATTCTTAACATGTATTTCCACTTGCCCTGAGTAAATCTGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CAA 90 bp AGTTTGAATACCCTTGGATATGAAACATATGTCCATTTTCCCTCTTACTCTTCTGACTCAAGATTGCCATaGCTTCTTCACTACCCAAAA +
Preference number: 5 (lower is better)
Translates to: SLNTLGYETYVHFPSYSSDSRLP*LLHYPK
Trigger: TTTTGGGTAGTGAAGAAGCAATGGCAATCTTGAGTC...AGAAGAGTAAGAGGGAAAATGGACATATGTTTCATATCCAAGGGTATTCAAACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS-3UTR CAA 90 bp CTTGCCCTGTATCAATTTTCACATCATTACTCTTCAGAATTCAACGAAAAGGTCTCATTCACAGTTATTTaGGTCTTGACATGTGTCATG +
Preference number: 5 (lower is better)
Translates to: LALYQFSHHYSSEFNEKVSFTVI*VLTCVM
Trigger: CATGACACATGTCAAGACCAAAATAACTGTGAATGA...GACCTTTTCGTTGAATTCTGAAGAGTAATGATGTGAAAATTGATACAGGGCAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS CCA 72 bp CAGGGACCTCCACGGACCCAAGCCGATGAGGGAAGGTaGTGCGGCGATCAGCAGCCGGGCGGCGGCATCGGG +
Preference number: 6 (lower is better)
Translates to: QGPPRTQADEGR*CGDQQPGGGIG
Trigger: CCCGATGCCGCCGCCCGGCTGCTGATCGCCGCACCACCTTCCCTCATCGGCTTGGGTCCGTGGAGGTCCCTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322886.12
ENST00000416496.6
ENST00000547316.1
ENST00000550669.5
ENST00000551558.1
CDS TCA 72 bp CCTGCCTCTGCAGGGACCTCCACGGACCCAAGCCGATaGGGGAAGGTGGTGCGGCGATCAGCAGCCGGGCGG +
Preference number: 6 (lower is better)
Translates to: PASAGTSTDPSR*GKVVRRSAAGR
Trigger: CCGCCCGGCTGCTGATCGCCGCACCACCTTCCCTCATCGGCTTGGGTCCGTGGAGGTCCCTGCAGAGGCAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000322886.12
ENST00000416496.6
ENST00000547316.1
ENST00000550669.5
ENST00000551558.1
CDS TCA 72 bp CCAGAGGTGGAGATGGTAAGACCATGCAAGGGACACTaGAAGACGGCAGCTGACCTGAGGACGGGCCCACAG +
Preference number: 6 (lower is better)
Translates to: PEVEMVRPCKGH*KTAADLRTGPQ
Trigger: CTGTGGGCCCGTCCTCAGGTCAGCTGCCGTCTTTCAGTGTCCCTTGCATGGTCTTACCATCTCCACCTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322886.12
CDS TCA 72 bp GTTTTTGGCAGGCTGTGCCGTCCATGCCAGCCATACTaGTTCTTAGCCACCCGGCTGACCAGATGCAGCGAC +
Preference number: 6 (lower is better)
Translates to: VFGRLCRPCQPY*FLATRLTRCSD
Trigger: GTCGCTGCATCTGGTCAGCCGGGTGGCTAAGAATCAGTATGGCTGGCATGGACGGCACAGCCTGCCAAAAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322886.12
ENST00000416496.6
ENST00000550669.5
ENST00000551058.1
ENST00000551558.1
ENST00000552907.5
CDS TCA 72 bp AACCACAGCTGTGGGGCCGACGAGAAGCTGGGCTATTaGTCCAAGGCCAGGCAAGCTGAAATTCACAGGTCC +
Preference number: 6 (lower is better)
Translates to: NHSCGADEKLGY*SKARQAEIHRS
Trigger: GGACCTGTGAATTTCAGCTTGCCTGGCCTTGGATCAATAGCCCAGCTTCTCGTCGGCCCCACAGCTGTGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322886.12
CDS CCA 72 bp GCTTCTGAGCTGAGGGTGCAGATGACAGCTCTACTGTaGCTGGGGCTTCTGAGCTTCTGTCATCCCTCTCTG +
Preference number: 6 (lower is better)
Translates to: ASELRVQMTALL*LGLLSFCHPSL
Trigger: CAGAGAGGGATGACAGAAGCTCAGAAGCCCCAGCCACAGTAGAGCTGTCATCTGCACCCTCAGCTCAGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322886.12
ENST00000416496.6
ENST00000550669.5
CDS CCA 72 bp AAGCTGAGGGTCTGCAGAAGGGAGTGTGGACGACTTTaGATTAACCACAGCTGTGGGGCCGACGAGAAGCTG +
Preference number: 6 (lower is better)
Translates to: KLRVCRRECGRL*INHSCGADEKL
Trigger: CAGCTTCTCGTCGGCCCCACAGCTGTGGTTAATCCAAAGTCGTCCACACTCCCTTCTGCAGACCCTCAGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322886.12
CDS TCA 72 bp CTGACGCTGGTCCCTCCTGCAGACTTCCATACAGCATaGACAGTGAGGCAGAGGGCACATACACTAGAGGCT +
Preference number: 6 (lower is better)
Translates to: LTLVPPADFHTA*TVRQRAHTLEA
Trigger: AGCCTCTAGTGTATGTGCCCTCTGCCTCACTGTTCATGCTGTATGGAAGTCTGCAGGAGGGACCAGCGTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322886.12
ENST00000416496.6
ENST00000550669.5
CDS CCA 72 bp AAGGCCAGGCAAGCTGAAATTCACAGGTCCTGTGTTTaGGAGAGCACCAAGAGTAGAAGAAACCGGGCCCGG +
Preference number: 6 (lower is better)
Translates to: KARQAEIHRSCV*ESTKSRRNRAR
Trigger: CCGGGCCCGGTTTCTTCTACTCTTGGTGCTCTCCCAAACACAGGACCTGTGAATTTCAGCTTGCCTGGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322886.12
CDS CCA 72 bp CCGGGTGTCTTGAAAAACGTCTCACGATGTGTGCGTTaGATGCTCTTGGGGGTCACTGGAACTGGTGACTGC +
Preference number: 6 (lower is better)
Translates to: PGVLKNVSRCVR*MLLGVTGTGDC
Trigger: GCAGTCACCAGTTCCAGTGACCCCCAAGAGCATCCAACGCACACATCGTGAGACGTTTTTCAAGACACCCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000416496.6
CDS CAA 72 bp GACAAGCGACAGCGGGCCGTCTTCATATTCCCTACTTaGCCTTTTAGTGGCTGGCTCATCCTCCTCCTGAGG +
Preference number: 6 (lower is better)
Translates to: DKRQRAVFIFPT*PFSGWLILLLR
Trigger: CCTCAGGAGGAGGATGAGCCAGCCACTAAAAGGCAAAGTAGGGAATATGAAGACGGCCCGCTGTCGCTTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322886.12
ENST00000416496.6
ENST00000550669.5
CDS CAA 72 bp CTCTTCAGGACAGGGTCTCCAAGGCTGCCGGGTGTCTaGAAAAACGTCTCACGATGTGTGCGTTGGATGCTC +
Preference number: 6 (lower is better)
Translates to: LFRTGSPRLPGV*KNVSRCVRWML
Trigger: GAGCATCCAACGCACACATCGTGAGACGTTTTTCAAGACACCCGGCAGCCTTGGAGACCCTGTCCTGAAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS CAA 90 bp CTTGGGCATGACAAGCGACAGCGGGCCGTCTTCATATTCCCTACTTaGCCTTTTAGTGGCTGGCTCATCCTCCTCCTGAGGTTTCCTCTC +
Preference number: 6 (lower is better)
Translates to: LGHDKRQRAVFIFPT*PFSGWLILLLRFPL
Trigger: GAGAGGAAACCTCAGGAGGAGGATGAGCCAGCCACTAAAAGGCAAAGTAGGGAATATGAAGACGGCCCGCTGTCGCTTGTCATGCCCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322886.12
ENST00000416496.6
ENST00000550669.5
CDS CAA 90 bp CTTTCTCTTCTCTTCAGGACAGGGTCTCCAAGGCTGCCGGGTGTCTaGAAAAACGTCTCACGATGTGTGCGTTGGATGCTCTTGGGGGTC +
Preference number: 6 (lower is better)
Translates to: LSLLFRTGSPRLPGV*KNVSRCVRWMLLGV
Trigger: GACCCCCAAGAGCATCCAACGCACACATCGTGAGACGTTTTTCAAGACACCCGGCAGCCTTGGAGACCCTGTCCTGAAGAGAAGAGAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS CAA 90 bp CCGGGTGTCTTGAAAAACGTCTCACGATGTGTGCGTTGGATGCTCTaGGGGGTCACTGGAACTGGTGACTGCAGGAGACTGCACACAAAG +
Preference number: 6 (lower is better)
Translates to: PGVLKNVSRCVRWML*GVTGTGDCRRLHTK
Trigger: CTTTGTGTGCAGTCTCCTGCAGTCACCAGTTCCAGTGACCCCCAAGAGCATCCAACGCACACATCGTGAGACGTTTTTCAAGACACCCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000416496.6
CDS TCA 72 bp TCTTCAGGACAGGGTCTCCAAGGCTGCCGGGTGTCTTaGAAAACGTCTCACGATGTGTGCGTTGGATGCTCT +
Preference number: 6 (lower is better)
Translates to: SSGQGLQGCRVS*KTSHDVCVGCS
Trigger: AGAGCATCCAACGCACACATCGTGAGACGTTTTTCAAGACACCCGGCAGCCTTGGAGACCCTGTCCTGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000322886.12
ENST00000416496.6
CDS CAA 72 bp CGGGGGACTCAGGTTGTTGGACGACACTGTGTGACCTaGACATCACTGGACTTAGGTTTAGTGAGGGCTGAC +
Preference number: 6 (lower is better)
Translates to: RGTQVVGRHCVT*TSLDLGLVRAD
Trigger: GTCAGCCCTCACTAAACCTAAGTCCAGTGATGTCAAGGTCACACAGTGTCGTCCAACAACCTGAGTCCCCCG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322886.12
CDS TCA 72 bp TCTCCCTCCAGGGTTGTCAACCTGGCACTTCCCATCTaGGCAGTGAATCTGCAGAAGAGACCATCACTTGCT +
Preference number: 6 (lower is better)
Translates to: SPSRVVNLALPI*AVNLQKRPSLA
Trigger: AGCAAGTGATGGTCTCTTCTGCAGATTCACTGCTCAGATGGGAAGTGCCAGGTTGACAACCCTGGAGGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551558.1
CDS CAA 72 bp TTGAAAAACGTCTCACGATGTGTGCGTTGGATGCTCTaGGGGGTCACTGGAACTGGTGACTGCAGGAGACTG +
Preference number: 6 (lower is better)
Translates to: LKNVSRCVRWML*GVTGTGDCRRL
Trigger: CAGTCTCCTGCAGTCACCAGTTCCAGTGACCCCCAAGAGCATCCAACGCACACATCGTGAGACGTTTTTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000416496.6
CDS CAA 90 bp CCACGTAAACGGGGGACTCAGGTTGTTGGACGACACTGTGTGACCTaGACATCACTGGACTTAGGTTTAGTGAGGGCTGACTCTGAAGCT +
Preference number: 6 (lower is better)
Translates to: PRKRGTQVVGRHCVT*TSLDLGLVRADSEA
Trigger: AGCTTCAGAGTCAGCCCTCACTAAACCTAAGTCCAGTGATGTCAAGGTCACACAGTGTCGTCCAACAACCTGAGTCCCCCGTTTACGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000322886.12
CDS GCA 72 bp AGTAGCCACCTGATCCTTGTTCTTCTCTGTACGGGCTaGTCGGTTCTGAGTTCACTTTCCTCTGGATCCTCT +
Preference number: 6 (lower is better)
Translates to: SSHLILVLLCTG*SVLSSLSSGSS
Trigger: AGAGGATCCAGAGGAAAGTGAACTCAGAACCGAGCAGCCCGTACAGAGAAGAACAAGGATCAGGTGGCTACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322886.12
ENST00000416496.6
ENST00000550669.5
CDS GCA 72 bp ATCCACTTGTCCATTCAGACCGTTCTGCATGGAGAATaGCTGCAGGTCCGTCTGAGCAACAGAAAATACTGG +
Preference number: 6 (lower is better)
Translates to: IHLSIQTVLHGE*LQVRLSNRKYW
Trigger: CCAGTATTTTCTGTTGCTCAGACGGACCTGCAGGCATTCTCCATGCAGAACGGTCTGAATGGACAAGTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322886.12
ENST00000416496.6
ENST00000550669.5
CDS CCA 72 bp ATTTGCTCTTCATATTTCTGCTCCTCTCCTAGTCTCTaGAGGTTCCTCAGGGTTTTTGGCAGGCTGTGCCGT +
Preference number: 6 (lower is better)
Translates to: ICSSYFCSSPSL*RFLRVFGRLCR
Trigger: ACGGCACAGCCTGCCAAAAACCCTGAGGAACCTCCAGAGACTAGGAGAGGAGCAGAAATATGAAGAGCAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000322886.12
ENST00000416496.6
ENST00000550669.5
ENST00000551058.1
ENST00000551558.1
ENST00000552907.5
CDS CCA 72 bp ACTGCCATGAGCCAGGTTTATTTCAATGAGGTCAAGTaGGCAGTCCAGTTGGGGAGCCATCTGCTTCTCTTT +
Preference number: 6 (lower is better)
Translates to: TAMSQVYFNEVK*AVQLGSHLLLF
Trigger: AAAGAGAAGCAGATGGCTCCCCAACTGGACTGCCCACTTGACCTCATTGAAATAAACCTGGCTCATGGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551558.1
CDS CAA 72 bp TCTTTGAGGGGTATAGATGCCCTGTTACCCATAGTCTaGGGAGAGGCAAGGTCTGTGGAATCTGAGGGTTTC +
Preference number: 6 (lower is better)
Translates to: SLRGIDALLPIV*GEARSVESEGF
Trigger: GAAACCCTCAGATTCCACAGACCTTGCCTCTCCCAAGACTATGGGTAACAGGGCATCTATACCCCTCAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322886.12
ENST00000416496.6
ENST00000550669.5
CDS TCA 72 bp TATTCTCCCAACAGGCCAAACTCGAGTGAACTGCCATaGGCCAGGTTTATTTCAATGAGGTCAAGTGGGCAG +
Preference number: 6 (lower is better)
Translates to: YSPNRPNSSELP*ARFISMRSSGQ
Trigger: CTGCCCACTTGACCTCATTGAAATAAACCTGGCTCATGGCAGTTCACTCGAGTTTGGCCTGTTGGGAGAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551558.1
CDS GCA 72 bp TTGGCCATTCACATGAATGTCTTTGAGGGGTATAGATaGCCTGTTACCCATAGTCTTGGGAGAGGCAAGGTC +
Preference number: 6 (lower is better)
Translates to: LAIHMNVFEGYR*PVTHSLGRGKV
Trigger: GACCTTGCCTCTCCCAAGACTATGGGTAACAGGGCATCTATACCCCTCAAAGACATTCATGTGAATGGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322886.12
ENST00000416496.6
ENST00000550669.5
CDS CCA 72 bp AGGTTTATTTCAATGAGGTCAAGTGGGCAGTCCAGTTaGGGAGCCATCTGCTTCTCTTTCTTCAGTGAGGAG +
Preference number: 6 (lower is better)
Translates to: RFISMRSSGQSS*GAICFSFFSEE
Trigger: CTCCTCACTGAAGAAAGAGAAGCAGATGGCTCCCCAACTGGACTGCCCACTTGACCTCATTGAAATAAACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551558.1
CDS CAA 72 bp CATCTTCAGGTTAGCTGTGGGTGTCCATGGTTCCGCTaGCTGTCTGTCAACAAACTTAACTGGAGTAATGGG +
Preference number: 6 (lower is better)
Translates to: HLQVSCGCPWFR*LSVNKLNWSNG
Trigger: CCCATTACTCCAGTTAAGTTTGTTGACAGACAGCAAGCGGAACCATGGACACCCACAGCTAACCTGAAGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322886.12
ENST00000416496.6
ENST00000547316.1
ENST00000550669.5
ENST00000551558.1
CDS TCA 72 bp GCTAGTGATCTATTCTCCCAACAGGCCAAACTCGAGTaGACTGCCATGAGCCAGGTTTATTTCAATGAGGTC +
Preference number: 6 (lower is better)
Translates to: ASDLFSQQAKLE*TAMSQVYFNEV
Trigger: GACCTCATTGAAATAAACCTGGCTCATGGCAGTTCACTCGAGTTTGGCCTGTTGGGAGAATAGATCACTAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000551558.1
CDS GCA 72 bp ATCTTCAGGTTAGCTGTGGGTGTCCATGGTTCCGCTTaGTGTCTGTCAACAAACTTAACTGGAGTAATGGGA +
Preference number: 6 (lower is better)
Translates to: IFRLAVGVHGSA*CLSTNLTGVMG
Trigger: TCCCATTACTCCAGTTAAGTTTGTTGACAGACAGCAAGCGGAACCATGGACACCCACAGCTAACCTGAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322886.12
ENST00000416496.6
ENST00000547316.1
ENST00000550669.5
ENST00000551558.1
CDS CCA 72 bp ACTAATGAGCATCTTCAGGTTAGCTGTGGGTGTCCATaGTTCCGCTTGCTGTCTGTCAACAAACTTAACTGG +
Preference number: 6 (lower is better)
Translates to: TNEHLQVSCGCP*FRLLSVNKLNW
Trigger: CCAGTTAAGTTTGTTGACAGACAGCAAGCGGAACCATGGACACCCACAGCTAACCTGAAGATGCTCATTAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322886.12
ENST00000416496.6
ENST00000547316.1
ENST00000550669.5
ENST00000551558.1
CDS CCA 72 bp GGTCCAAGCTGCTTGATGGAGGCACCACTCTCTTACTaGCAAAGGCTTTTCCCTGTGAATTGTCTTCTATTT +
Preference number: 6 (lower is better)
Translates to: GPSCLMEAPLSY*QRLFPVNCLLF
Trigger: AAATAGAAGACAATTCACAGGGAAAAGCCTTTGCCAGTAAGAGAGTGGTGCCTCCATCAAGCAGCTTGGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322886.12
ENST00000416496.6
ENST00000550669.5
CDS CAA 72 bp TGGTCTGGGGCATCTTGGCTTTCTTCTATCAGTATTTaGGCAGCCACATCCAGAGTGACAATCTTGGTTTTG +
Preference number: 6 (lower is better)
Translates to: WSGASWLSSISI*AATSRVTILVL
Trigger: CAAAACCAAGATTGTCACTCTGGATGTGGCTGCCAAAATACTGATAGAAGAAAGCCAAGATGCCCCAGACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322886.12
ENST00000416496.6
ENST00000550669.5
ENST00000551058.1
ENST00000552907.5
CDS CAA 90 bp ACTAATGAGCATCTTCAGGTTAGCTGTGGGTGTCCATGGTTCCGCTaGCTGTCTGTCAACAAACTTAACTGGAGTAATGGGATTTCTTTC +
Preference number: 6 (lower is better)
Translates to: TNEHLQVSCGCPWFR*LSVNKLNWSNGISF
Trigger: GAAAGAAATCCCATTACTCCAGTTAAGTTTGTTGACAGACAGCAAGCGGAACCATGGACACCCACAGCTAACCTGAAGATGCTCATTAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000322886.12
ENST00000416496.6
ENST00000547316.1
ENST00000550669.5
ENST00000551558.1
CDS CAA 90 bp AATTTACTATGGTCTGGGGCATCTTGGCTTTCTTCTATCAGTATTTaGGCAGCCACATCCAGAGTGACAATCTTGGTTTTGGAGACGAGG +
Preference number: 6 (lower is better)
Translates to: NLLWSGASWLSSISI*AATSRVTILVLETR
Trigger: CCTCGTCTCCAAAACCAAGATTGTCACTCTGGATGTGGCTGCCAAAATACTGATAGAAGAAAGCCAAGATGCCCCAGACCATAGTAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322886.12
ENST00000416496.6
ENST00000550669.5
ENST00000551058.1
ENST00000552907.5
CDS CAA 72 bp ATCAGTATTTTGGCAGCCACATCCAGAGTGACAATCTaGGTTTTGGAGACGAGGAACAGCATGACAAACTTC +
Preference number: 6 (lower is better)
Translates to: ISILAATSRVTI*VLETRNSMTNF
Trigger: GAAGTTTGTCATGCTGTTCCTCGTCTCCAAAACCAAGATTGTCACTCTGGATGTGGCTGCCAAAATACTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000322886.12
ENST00000416496.6
ENST00000550669.5
ENST00000551058.1
ENST00000552907.5
CDS CAA 72 bp AGAACCATGGCGAGCCAGCTTCTGTTTTGCACAGACTaGAATCTGGCCATATGTTTCTCTTTTCAATTCTGG +
Preference number: 6 (lower is better)
Translates to: RTMASQLLFCTD*NLAICFSFQFW
Trigger: CCAGAATTGAAAAGAGAAACATATGGCCAGATTCAAGTCTGTGCAAAACAGAAGCTGGCTCGCCATGGTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322886.12
ENST00000416496.6
ENST00000550669.5
CDS GCA 72 bp TGTGTTAAAAGAACCATGGCGAGCCAGCTTCTGTTTTaGACAGACTTGAATCTGGCCATATGTTTCTCTTTT +
Preference number: 6 (lower is better)
Translates to: CVKRTMASQLLF*TDLNLAICFSF
Trigger: AAAAGAGAAACATATGGCCAGATTCAAGTCTGTGCAAAACAGAAGCTGGCTCGCCATGGTTCTTTTAACACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322886.12
ENST00000416496.6
ENST00000550669.5
CDS CCA 72 bp GAGGCGTCGTACCTTTGTTTTAAATTTACTATGGTCTaGGGCATCTTGGCTTTCTTCTATCAGTATTTTGGC +
Preference number: 6 (lower is better)
Translates to: EASYLCFKFTMV*GILAFFYQYFG
Trigger: GCCAAAATACTGATAGAAGAAAGCCAAGATGCCCCAGACCATAGTAAATTTAAAACAAAGGTACGACGCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322886.12
ENST00000416496.6
ENST00000550669.5
CDS CAA 72 bp ACATCAAGCTGTAGAGAATCTGTAAATGCATCGTCCTaGTTTTCAATGGGTCGGAATAGTCCCTTTTTCTTC +
Preference number: 6 (lower is better)
Translates to: TSSCRESVNASS*FSMGRNSPFFF
Trigger: GAAGAAAAAGGGACTATTCCGACCCATTGAAAACAAGGACGATGCATTTACAGATTCTCTACAGCTTGATGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000322886.12
ENST00000416496.6
ENST00000550669.5
ENST00000551558.1
CDS CAA 72 bp TCCAAATTTATAATCTATCAGGTCCAGCTCTTTCTGTaGGAGGTAGGCCATTTGCTCTTCATATTTCTGCTC +
Preference number: 6 (lower is better)
Translates to: SKFIIYQVQLFL*EVGHLLFIFLL
Trigger: GAGCAGAAATATGAAGAGCAAATGGCCTACCTCCAACAGAAAGAGCTGGACCTGATAGATTATAAATTTGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000322886.12
ENST00000416496.6
ENST00000550669.5
ENST00000551058.1
ENST00000551558.1
ENST00000552907.5
CDS CCA 72 bp AAAGTAAATCTTACAGTTGCACAAAAAGAACCAGCATaGGGCTGCCAATCTAAAAATGGGAGTAATGCTAGT +
Preference number: 6 (lower is better)
Translates to: KVNLTVAQKEPA*GCQSKNGSNAS
Trigger: ACTAGCATTACTCCCATTTTTAGATTGGCAGCCCCATGCTGGTTCTTTTTGTGCAACTGTAAGATTTACTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000551558.1
CDS CCA 72 bp GAGGTGAAGATTCTTACTTTTAAATTTACTATGGTCTaGGGCATCTTGGCTTTCTTCTATCAGTATTTTGGC +
Preference number: 6 (lower is better)
Translates to: EVKILTFKFTMV*GILAFFYQYFG
Trigger: GCCAAAATACTGATAGAAGAAAGCCAAGATGCCCCAGACCATAGTAAATTTAAAAGTAAGAATCTTCACCTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000551058.1
CDS CAA 72 bp CAACACATGAAATCCCACCCTTTATGTGCTAGTAAGTaGATGGAGGTGAAGATTCTTACTTTTAAATTTACT +
Preference number: 6 (lower is better)
Translates to: QHMKSHPLCASK*MEVKILTFKFT
Trigger: AGTAAATTTAAAAGTAAGAATCTTCACCTCCATCAACTTACTAGCACATAAAGGGTGGGATTTCATGTGTTG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000551058.1